LOCUS       DAPIVO010000001        86775 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.001, whole genome shotgun sequence.
ACCESSION   DAPIVO010000001 DAPIVO010000000
VERSION     DAPIVO010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 86775)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 86775)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..86775
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.001"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            137..1543
                     /gene="aspA"
                     /locus_tag="RJ239_000001"
     CDS             137..1543
                     /gene="aspA"
                     /locus_tag="RJ239_000001"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HDV7330169.1"
                     /translation="MGTRKEHDFIGELEISDEVYYGVQTFRAVENFDISHDRLKDFPR
                     FVRALARVKKAAAMANHELGLLDKNIQDAIIKACDKILEGGYYDQFVVDMIQGGAGTS
                     TNMNANEVIANIGLELMGHKKGEYQYLHPNDHVNLSQSTNDAYPTALHLALHDYLSDL
                     AKAMEHLKKAYERKAEEFKDVLKMGRTQLQDAVPMTLGREFKTFAVMIGEDIQRVLEA
                     RKLILEINLGGTAIGTGINSHPDYPKVVERKIREVTGFEYTVAEDLIEATQDTGAYVQ
                     ISGVLKRVATKLSKVCNDLRLLSSGPKCGLNEINLPKMQPGSSIMPGKVNPVIPEVVN
                     QVCYFVIGADVTVTFACEGGQLQLNVFEPVVAYSLFNSVVMLEKAMYTLADKCIDGIT
                     ANEKICSDFVYNSVGIVTALNPYIGYENSASIAKEAMNTGKRVADIALERGLLSKEQI
                     DEILTPSNMLNPHMEAKK"
     gene            1559..2896
                     /locus_tag="RJ239_000002"
     CDS             1559..2896
                     /locus_tag="RJ239_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDV7330170.1"
                     /translation="MDIMIILQVIVLLGAIFIGIRLGGIAIGYAGGLGVVILGLVLGM
                     KPGNIPWDVILIIAAAIAAISAMQQAGGLDYMVRVTEKILRSSPKFINYLAPACGWLL
                     TILAGTGNAVFSLMPVVVDVAKSQNIKPSVPLSLMVVSSQIGITASPVSAAVVYMSGV
                     LEPLGWNYPTLIGIWISTTFVACMLAAFIVSLITPMDLSKDSVYQERLKAGLVKDAGA
                     VLHGEDKPGAKLSVVIFLITVLAVVLYATAISSNIKWIDPVVVSRDAAIMSFLLTAAT
                     LITWLCKVEPGKILDTSVFKSGMTACVCVFGVAWLGNTFVAGHEASIKEVAGDWVKQT
                     PAMLAVAFFFASMLLYSQAATAKAIVPVIITALGISAANPHDSYMLVACFAAVSALFV
                     LPTYPTLLGAVQMDDTGTTRIGKFIFNHSFFIPGVLAIAIAVALGFVLAPMLI"
     gene            3004..4365
                     /locus_tag="RJ239_000003"
     CDS             3004..4365
                     /locus_tag="RJ239_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7330171.1"
                     /translation="MKIKVGLIFSGIACLFLTACVNQVKQNTTFENTLTQKYCGDDFF
                     NQNLEKIKKNDDVIYTGLNAGLIARNCGDFNKSNVFFDAVEESYKYDVDLENVSPKAA
                     KFIGTTLLNDNIVDYDGSLYERIMVNIYKALNYMEEDDYENARVEFNRVLMRQDKAKE
                     YFAKEIEKNRADLDKAKEDKNYDKNMNENSKVIEAQYDNLFKEFDTTKNFINPYATYL
                     ASIFFFMDKDYRKAADLFREVAIIYPKNKTIKKEAKIFKEYATKIKVKKAKKYVFVVY
                     ENGFGVVKDEFALTLPFIVDKKIISTNIALQTLKKREASFANLNINGQNTNDFVDLDN
                     IVATEFKINMPAMIAKALAQTIIKTTLNVAVANNDSTGGWLSLATAVATAATNKADVR
                     SWRGLPKSIAIATIENDGNLEIKDPQGNILFQKSLDKNKNALVIVRSFAPYLPASVAI
                     MEK"
     gene            4375..4743
                     /locus_tag="RJ239_000004"
     CDS             4375..4743
                     /locus_tag="RJ239_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcfL family protein"
                     /protein_id="HDV7330172.1"
                     /translation="MKKNILFILMFLLSACAPSYQINSNQNTVILGSNLPKSLVKQFQ
                     KRINSNGYLEFEVILRSTFAKDVIYKVDWLDKDGFVLRDVLNEDYQALRIPAGQEVIL
                     RKLASDTRANDFRLEIKAKN"
     gene            4767..5390
                     /gene="lpoB"
                     /locus_tag="RJ239_000005"
     CDS             4767..5390
                     /gene="lpoB"
                     /locus_tag="RJ239_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoB"
                     /protein_id="HDV7330173.1"
                     /translation="MKKTKILGTALIGALLFSGCAQTAYTDGKASQVKKGDALTLGLD
                     RQDFESAAETMINSMLSDPAFANIKPGTRKVIAIGRVVNDTPQRIDTEKLTAKITSAL
                     RKSGKFVLTSAVAAGGALDSMSEDVRELRDNDEFNQKTIAKKGTLVSPDFSLAGKIRQ
                     DNVKLSNGKTQVEYFFLLRLTDLTSGLVYWEDEQTIDKTGSSKSVTW"
     gene            5451..6809
                     /locus_tag="RJ239_000006"
     CDS             5451..6809
                     /locus_tag="RJ239_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004276598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330174.1"
                     /translation="MIFKRIRNEKILFIGSLVMASLLYAQGSQPVEITQQDINTQNEM
                     SDASTKDITPKSIEDFFEEFADNFGIEYGITKDGKTFYTGKSTVAVNDTDPQFAQALQ
                     NAYQKAMLNLQSEFIRDAFGRIATSKIQNYEADNSTNAKEFDELPKGDKVDQILNKLT
                     QLAGAQLDKALKDLGIDTNSLSEDRKKTLLKQEFLNKTMTNAIGSMSGLVPVQTIVTQ
                     RRGEYDVGVVAVISNKTRQLAKDMALARQSAIKGKGKAISEYLPKDTKGFLNEYGIRL
                     VYDENGAPIILSYGNWGYVADPSNAKKTNILEDRAKETALTMADAAIIEFINTNLSLK
                     DERTTGDTYEEIIKQSINVNDSSTQEQTQNITNIIDKVNSKIKASASGKIRGIRTLKK
                     WSYTSENGIEHVGAVRFYSYENLANTNEALNSKSNATKNEAKKSSSIQRSSNVVNSMD
                     DF"
     gene            6819..8021
                     /locus_tag="RJ239_000007"
     CDS             6819..8021
                     /locus_tag="RJ239_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330175.1"
                     /translation="MKIIKILFLGLFLSLSLNAKVITTTSTKSSTGEGTGLTREDAIN
                     NAIIEAIGKMSGVSINSLKKSNTSVSTDNSGSNIQDNYSEQISKATKGRADTYEINSV
                     EQDANGKYTANVTIFKTTTTKKYQAPGLSADNRRSITVFDSTPDAAKRGIGSALQQKI
                     ISDLLQSRKFNVLDRDSSGYYEMEKALIKSGDAASDEVYKLKNMLATDYILLFSISGL
                     EGKQKTSNLTGKSKTEIEVIVDYRVLLFATRQIKFSNTLSMKVNLKDNSLSANETALK
                     QIANRIAGDILNAIYPLKVASVENNEVIFSQSLNQGDVYECFALGKVIKDTYTKENTG
                     RVESKTGSIEITRTSPKFSYAKITEGSVKVGDICRPLSNTGSGNGYTIGRDANYQTQE
                     GGGVNLGF"
     gene            8180..8488
                     /gene="rplU"
                     /locus_tag="RJ239_000008"
     CDS             8180..8488
                     /gene="rplU"
                     /locus_tag="RJ239_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HDV7330176.1"
                     /translation="MYAIIKHSGKQYKVSVGDELKLDHFEAESKASIEVSEVLAINDK
                     ELKVGAPFVAGAKVVLEVINHGKDKKVVIYKKRRRKDSKLKRGFRRQFTRVVVKDIKA
                     "
     gene            8499..8753
                     /gene="rpmA"
                     /locus_tag="RJ239_000009"
     CDS             8499..8753
                     /gene="rpmA"
                     /locus_tag="RJ239_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HDV7330177.1"
                     /translation="MAHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTA
                     THAGNNVGMGKDHTIFALIDGFVKFERKDKDRKKVSVYPA"
     gene            8860..9912
                     /gene="obgE"
                     /locus_tag="RJ239_000010"
     CDS             8860..9912
                     /gene="obgE"
                     /locus_tag="RJ239_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HDV7330178.1"
                     /translation="MFIDSVKITLASGDGGKGAVSFRREKHVPLGGPDGGDGGNGGDI
                     IFVCDNNTHTLVNFKGKRELRAQNGAGGMGRNKNGKKGENLELIVPEGTQVIDAQTNE
                     ILLDLTKEGQRELFLKGGKGGLGNTHFKHATNQRPDYAQPGIKGESRLVRLELKLIAD
                     VGLVGFPNVGKSTLISVVSNAKPEIANYEFTTLTPKLGLVDVNEYNSFVMADIPGIIE
                     GASGGKGLGLAFLKHIERTSFLLFVLDPMRQMPLKEQFIVLRKELEKFSNELFGRKFG
                     IMISKSDSVRLGEEFAEQIALNINELDNYLKEINNPQSFLIKVSSLEKTGLKELKFML
                     LEEIKTLRNNKKNLTI"
     gene            10017..10772
                     /gene="proB"
                     /locus_tag="RJ239_000011"
     CDS             10017..10772
                     /gene="proB"
                     /locus_tag="RJ239_000011"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HDV7330179.1"
                     /translation="MKRIVVKVGSHVISEENTLSFERLKNLVAFLAKLMEKYEVILVT
                     SAAISAGHTKLDIDRKNLINKQVLAAIGQPFLISVYNELLAKFNKLGGQILLTGKDFD
                     SRKATKHAKNAIDMMINLGILPIINENDATAIEEIVFGDNDSLSAYATHFFDADLLVI
                     LSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQATIKTGSEHGTGGIVTKLKAAKFLL
                     EHNKKMFLASGFDLSVAKTFLLEDKQIGGTLFE"
     gene            10846..11763
                     /locus_tag="RJ239_000012"
     CDS             10846..11763
                     /locus_tag="RJ239_000012"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HDV7330180.1"
                     /translation="MKKIIFMGTPSYATCILKALVENENFKLVALFTQPDKAVGRKQI
                     LTPSDTKAFLSQNYPSIPIFTPSSLKDKNIIREIKDLNPDFIVVAAYGKILPKAILDL
                     APCVNLHASLLPKYRGASPIQSAILNKDEKSGVCTMLMEEGLDTGAILESLECDIKDK
                     NSSEVFELLANLAAKIILSTLLNFDKITPKKQEESLATLCRKIKKEDGLINLQNAREL
                     YQKYLAFTPWPGVFLENGLKFLELELVDELKQNAKMGEILELEKESFLLACKQGVLRI
                     KKLQESGKKALDGRTYLNGKRLKSEDSLC"
     gene            11726..12379
                     /locus_tag="RJ239_000013"
     CDS             11726..12379
                     /locus_tag="RJ239_000013"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HDV7330181.1"
                     /translation="MEKGLKVKIVCVESIDSTHLFLCKQIRNGKIDENFAIYALEQIN
                     GVGSRENSWQSSKGNLHLSFCIKEEDLPKDLPLASVSIYFAYLLKEVLQEKGSKIWLK
                     WPNDLYLDDKKAGGVISAKISNFIIGGMGLNLKFAPQNTALCDIEISLKDLVSEFLQK
                     VEKKILWKNIFSKYMLEFEKSRKFSVHHEGKVFSLENSFLYEDGSILLGDKRVYSLR"
     gene            12376..13161
                     /locus_tag="RJ239_000014"
     CDS             12376..13161
                     /locus_tag="RJ239_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004278029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HDV7330182.1"
                     /translation="MSEIITIANQKGGVGKTTTAVNLAASLAVAEKKVLLIDVDPQAN
                     ATTGLGFNRNNYEYNIYHVFIGRKKLSDIILKTELPQLHLAPSNIGLVGIEQELAKGE
                     NNEKKMLLKNQIQEVIDEYDFIIIDSPPALGSITINAFAASDSVIIPIQCEFYALEGV
                     AMVLNTIKIIKKTINSKLRVRGFLPTMYSSQNNLSKDVVDDLKQNFKKQLFTINGNED
                     DFIVIPRNVKLAESPSFGKPIILYDIKSPGSVAYQNLAYSILG"
     gene            13167..14003
                     /locus_tag="RJ239_000015"
     CDS             13167..14003
                     /locus_tag="RJ239_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HDV7330183.1"
                     /translation="MGLNKDRGLSSLISDMDTVYSKELGFDKNQSTMIEIDQISPNPF
                     QPRKNFDQEALDELANSIKEFGLIQPIIVFKKNNKFILIAGERRLRAVKALGKKEILA
                     FIADIDENKLRELALIENIQRENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQI
                     TNTLRLLNLDIRTQELIASGKISQGHAKVLVGLDQKDEKMLVDSIIGQKLNVRDTEKI
                     VKKIKNNESLPNQEFEDEIKKLKQILNRFGFDCKNKNNDFVIHLENIDKIKKLIKMLE
                     KL"
     gene            14064..14489
                     /locus_tag="RJ239_000016"
     CDS             14064..14489
                     /locus_tag="RJ239_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B'"
                     /protein_id="HDV7330184.1"
                     /translation="MFEDMHPSIMLATMAIFLAMIVILNSMLYKPLLKFMDERNDSIK
                     NDENKVKENSQEVLGVNDELEAIHINTREEIQKIKQSAIAAAKEEAEQILRSKKEELE
                     RKMASFYADLAVQKKELQEHLNIHLSELKQALQNNIKKI"
     gene            14500..15012
                     /locus_tag="RJ239_000017"
     CDS             14500..15012
                     /locus_tag="RJ239_000017"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HDV7330185.1"
                     /translation="MSKLFFIIFLLPLYAFGASNGSGEYDIIPRTINFLIFVAILYYF
                     VATPFKNFYKNRIVKISSKLDEIQKKLLESKAKKLDTMKKLEEAKASAAAALITAKKE
                     AEILVQNIKKETQDELDLLQKHFEEQKDYEFRKMEKELVSNTLNEIFSDPNMTLKQSE
                     IIELMMKKVS"
     gene            15015..15536
                     /locus_tag="RJ239_000018"
     CDS             15015..15536
                     /locus_tag="RJ239_000018"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HDV7330186.1"
                     /translation="MENIIARRYAKAIASRADINDFYQNLCILNSAFVLPKFKNIIES
                     NEIKKERKMEFLDSFFDIKNSSFQNFLRLLIENSRLECIPQIVKELERQKAFKENIFV
                     GIVYSKEKLSQENLKDLEVKLNKKFDANIKLNNKISQDDSVKIELEELGYELSFSMKA
                     LQNKLNEYILKII"
     gene            15550..17055
                     /gene="atpA"
                     /locus_tag="RJ239_000019"
     CDS             15550..17055
                     /gene="atpA"
                     /locus_tag="RJ239_000019"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HDV7330187.1"
                     /translation="MKFKADEISSIIKERIENFDLNLEIEETGKIISVADGVAKVYGL
                     KNIMAGEMVEFENGDKGMALNLEESSVGIVILGKGEGLKEGASVKRLKKLLKVPVGEA
                     LIGRVVNALGEPIDAKGVINANEYRFVEEKAKGIMARKSVHEPLHTGIKAIDALVPIG
                     RGQRELIIGDRQTGKTTVAVDTIISQRGQGVICIYVAIGQKQSTVAQVVKRLEEHGAM
                     EYTIVVNAGASDPAALQYLAPYTGVTMGEFFRDNAKHALIVYDDLSKHAVAYREMSLI
                     LRRPPGREAYPGDVFYLHSRLLERASKLNDELGAGSLTALPIIETQAGDVSAYIPTNV
                     ISITDGQIFLETDLFNSGIRPAINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYREL
                     QAFAQFASDLDEASRKQLERGQRMVELLKQPPYSPLSVEKQVVLIFAGTKGFLDDIAV
                     SRIKEFEDGIYPFIEAKHPDIFEQIRSKKALDSDLEEKLAKAINEFKANHL"
     gene            17064..17948
                     /locus_tag="RJ239_000020"
     CDS             17064..17948
                     /locus_tag="RJ239_000020"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HDV7330188.1"
                     /translation="MSNLKEIKRKIKSVHNTQKTTNAMKLVSTAKLKKAEEAAKRSKI
                     YAQKIDEILSEISFQINKIVHNEDDVRLSLFHKKEQIKTVDLIFITADKGLCGGFNIK
                     TLKTVSEMLKEYEAKNINIRLRAIGKTGIEYFNFQKIELLEKYFHLSSSPDYEKACEV
                     IHAAVDDFLNGNTDEVILVHNGYKNMITQELKINHLIPVEPKSIEQTHNSLLELEPEG
                     TELLKDLMKTYFEYNMYYALIDSLAAEHSARMQAMDNATNNAKARVKQLNLAYNKARQ
                     ESITTELIEIISGVESMK"
     gene            17974..19371
                     /gene="atpD"
                     /locus_tag="RJ239_000021"
     CDS             17974..19371
                     /gene="atpD"
                     /locus_tag="RJ239_000021"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HDV7330189.1"
                     /translation="MQGFISQVLGPVVDVDFNDYLPQINEAIVVNFESEGKKHKLVLE
                     VAAHLGDNRVRTIAMDMTDGLVRGLKAEALGAPISVPVGEKVLGRIFNVTGDLIDEGE
                     EISFDKKWAIHRDPPAFEDQSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTV
                     IIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGA
                     RNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLA
                     SEMGKFQERITSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGI
                     YPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILGMDELSEEDKL
                     VVERARKIEKFLSQPFFVAEVFTGSPGKYISLEDTIAGFKGILEGKYDHLPENAFYMV
                     GNIDEAIAKADKLKG"
     gene            19375..19764
                     /locus_tag="RJ239_000022"
     CDS             19375..19764
                     /locus_tag="RJ239_000022"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HDV7330190.1"
                     /translation="MNDLINFEIVTPLGVIYQGEVKSVTLPGSEGEFGVLKGHAALVS
                     SLKSGVIDIEKADLNHELIAIDAGHAKVDEDKICVLAKGAVWVCGSDESEIEKNLAQA
                     KDLIKSMSSDNAALAATFSKLDNARMH"
     gene            19764..20318
                     /locus_tag="RJ239_000023"
     CDS             19764..20318
                     /locus_tag="RJ239_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HDV7330191.1"
                     /translation="MNFEAIFHFFNSSSIITYIVLLWLSLYFILAFSILFARLTYLAT
                     WRNKEKESLETLLLGEKDLSRTDSILRKCNDTTSNHLEIYKNLASRRASAGLTWLSII
                     ASTSPFIGLFGTVISILETFGGLGTQNSLSIIAPKISEALVATGCGILVAIPAYTFHL
                     IIKRKAFELLSIIDSEIKVISSSK"
     gene            20327..20716
                     /locus_tag="RJ239_000024"
     CDS             20327..20716
                     /locus_tag="RJ239_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HDV7330192.1"
                     /translation="MPFDDEKPELNITPLVDIMLVLLAILMVTAPSITYEEKINLPQG
                     SQKNTSTPTVKSLIISINAKKEIFLNQEKYDFISFADNLAQRKAQFNTEDPVFIRADK
                     SLKYDDVISVLRSVKNLGFNKVALQTE"
     gene            20719..21498
                     /locus_tag="RJ239_000025"
     CDS             20719..21498
                     /locus_tag="RJ239_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB C-terminal domain-containing protein"
                     /protein_id="HDV7330193.1"
                     /translation="MKNYGLSNLNSFLLALAIYISIVILVFFRLVSEVEPAIQYTDIK
                     DSFVDIELAEPSKQVITQSNTPKEIQKPTEQIDIEKLFAQTTNKTVKTEDIDQKASNF
                     NELFGNIKEIQEEKTTKIQSSAKSGISSAPKPQASELVKQLNDSLLQEESSTQGESTK
                     AQKIGIYDEFLGKVVRIITQRWTQYYPNSEKISVKVKIFIDENGKFGYTSVEKSGNPL
                     YDAKVAEFLESQKGKFITYPPQNKNISITMNLRDEVKVKND"
     gene            21508..22716
                     /gene="tolB"
                     /locus_tag="RJ239_000026"
     CDS             21508..22716
                     /gene="tolB"
                     /locus_tag="RJ239_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HDV7330194.1"
                     /translation="MKKIVAIFLVFLGSLWAEDPVIDVVNSGVVLPKIIVKDNSNLSD
                     ENLKKSFYNIIVNDLKVSSNFEVVANATETSNYIFEYTLNKNGNTLSLNVKIKAGGSD
                     KSEQTYTLNGLEQYPFLAHKSVKASVNALGLAPVDWMDHKILIARNSSSKKSQIIMAD
                     YTLTYQKVIVDGGLNLFPKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKILSSGG
                     MVVASDVNVDGSKLLVTMAPKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSK
                     VVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNNSAVSTYKDFLVYSSREPNQAGVFNI
                     YLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNANKTFYFPL
                     RVGKIQSIDW"
     gene            22793..23290
                     /gene="pal"
                     /locus_tag="RJ239_000027"
     CDS             22793..23290
                     /gene="pal"
                     /locus_tag="RJ239_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HDV7330195.1"
                     /translation="MKKILFTSIAALAVVISGCSTKSTSVSGDSSVDSNRGSGGSDGW
                     DIDSKISQLNDTLNKVYFDFDKFNIRPDMQNVVSTNANIFNTEVSGVSITVEGNCDEW
                     GTDEYNQALGLKRAKAVKEALIAKGVNADRIAVKSYGETNPVCTEKTKACDAQNRRAE
                     FKLSR"
     gene            23294..24241
                     /locus_tag="RJ239_000028"
     CDS             23294..24241
                     /locus_tag="RJ239_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDV7330196.1"
                     /translation="MKKIFTVALLGATLLYAESSAFGAGDITSNSSYGLTSNEKLFKE
                     KLDNLNNENIQTNARINEINERIEGLQSTLEGINSQYAKSNSRLSQVEENNQNIENNF
                     TSEIQKLKAYVEESRKIQEANNKQVKKVLAELSSLVDAINANYVSKNELNDANLSVKT
                     ITPSVVVSTTDSNSTIENNNTQNTQDDKAKQIDESWKKKKNNEILELAIKDVDKNAFE
                     DSKAKLNFLITKQYKPARANFWLGEIEYKQKNYNNAIVYYKKSSSLSTKGDYFPKLLY
                     HTAISLDKTGDTKTANGFYKALKTNYPNSPEAKASPNRK"
     gene            24256..24825
                     /locus_tag="RJ239_000029"
     CDS             24256..24825
                     /locus_tag="RJ239_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDV7330197.1"
                     /translation="MAIEKNSVVSMFYELKDANTNEVLESNLYSQPISFILGKGQILE
                     SLEEEVMKLDCPSNADVVIKKEKGLGEYDENAVQTLPKEQFAGIDLKVGMELFGEGEN
                     GETVRVTVKEIGENDVTIDYNHPYAGRDLLFSLNIVDARAASEDEILTGIIAGSHSCG
                     CGSGHGHDHHHGHGHGGGGCCGGGGCGCH"
     gene            24825..25745
                     /gene="fabD"
                     /locus_tag="RJ239_000030"
     CDS             24825..25745
                     /gene="fabD"
                     /locus_tag="RJ239_000030"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HDV7330198.1"
                     /translation="MNAAFIFPGQGSQSLGMGKDFYENSIKAKELLQNASDFCKIDFK
                     HLLFEENEKLNQSEFTQPAIVLNSLMAYSVLLEKKPDLSSKFALGHSLGEFSVLAVNG
                     AFDFLEALSLVNKRGLFMQEDCAKVEAGMMVVLGLDDEKVEELCQKAQKENKQIFAAN
                     YNCDGQIVVAGLKPDLASYESVFKEAGAKRAMLLNMSVASHCPLLENASAKLCVELEK
                     VLKPNFKAVISNANAKIYTSKEEALELLKAQLISPVLYKQSIKACENEVDYFIEFGAS
                     VLKGLNKKITSKETYALTNMNDIDEFLKVV"
     gene            25742..26431
                     /gene="pfs"
                     /locus_tag="RJ239_000031"
     CDS             25742..26431
                     /gene="pfs"
                     /locus_tag="RJ239_000031"
                     /EC_number="3.2.2.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxyfutalosine nucleosidase"
                     /protein_id="HDV7330199.1"
                     /translation="MMKIAILGAMSEEITPLLETLKDYTKIEHANNTYYFAKYKNHEL
                     VLAYSKIGKVNSTLSASVMIEKFGAQALLFTGVAGAFNPELEIGDLLYATKLAQYDLD
                     ITAFGHPLGFVPGNEIFIKTDEKLNNLALEVAKELNIKLRAGIIATGDEFICDEAKKA
                     KIREIFNADACEMEGASVALVCDALKVPCFILRAMSDKAGEKAEFDFDEFVINSAKIS
                     ANFVLKMCEKL"
     gene            26428..27183
                     /locus_tag="RJ239_000032"
     CDS             26428..27183
                     /locus_tag="RJ239_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HDV7330200.1"
                     /translation="MINLSKKLIRQVAQANAKFGLIKDGDRVLLGLSGGKDSLALAHL
                     LNRMQAHAPFKFELEAVTLSYGMGEDYSHLHAHCEEHGIKHSVLDSNIYEVSGDTIRE
                     NSSFCSYFSRMRRGALYTYALEKGFNKLAIAHHLDDAAESFFMNFIHNGALRTLAPIY
                     QSKRGITVIRPLIFVRERQLRDNATQNELSVIGNEFCPGMKLSEKNVKFPHAREEAKQ
                     LLANLEKDHPKLFTSLKTAFANLHTESFWLQKA"
     gene            27188..27709
                     /locus_tag="RJ239_000033"
     CDS             27188..27709
                     /locus_tag="RJ239_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase family protein"
                     /protein_id="HDV7330201.1"
                     /translation="MKKAFVLVDYQNDFIDGSLGFDKALKIKENILKALNQIDFNNTH
                     LLLTYDTHDEHYLQSKEGLNLPVKHCIKESLGWQMPKEFEPFLQKAHKIFYKNTFGSL
                     ELANFIQKSDYEELHFAGLVSHICVFCNIILAFGAKPNARIILHQNLSASFDENLEKS
                     AFDILRAYGIEIV"
     gene            27709..28323
                     /gene="recO"
                     /locus_tag="RJ239_000034"
     CDS             27709..28323
                     /gene="recO"
                     /locus_tag="RJ239_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecO"
                     /protein_id="HDV7330202.1"
                     /translation="MQGFILHTQKVKDEDLIVYILSPKMLIKAYRFYGLRHSSILSGY
                     KIDFALEENPSFLPRLKDVLHLGFLWIMQRDKMLIWQEFIRLLYRHLKDVEELDSFYF
                     DLLDECVKRFEKQNPKRVIVDAYLKILEFEGRLHKDFFCFACDEKIQNSITLLRAFLP
                     SHSQCALGFEFEEKKLKQFYSSKNCAIFDDEEIENLYHLIKEGL"
     gene            28320..28727
                     /gene="ybeY"
                     /locus_tag="RJ239_000035"
     CDS             28320..28727
                     /gene="ybeY"
                     /locus_tag="RJ239_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HDV7330203.1"
                     /translation="MILSDEKCDFLESIASFLSPKDVELVFVDSKEMQEINLEQRKQD
                     KTTDVLSFPLENIDESLPLGSVVINVDLAKEKAKELGHSYEEEISLLFIHAMLHLLGF
                     DHENDNGEMREKEKELIEHFNLPKSLIVRTLED"
     gene            28851..29297
                     /locus_tag="RJ239_000036"
                     /pseudo
     CDS             28851..29297
                     /locus_tag="RJ239_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343582.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(29401..29601)
                     /locus_tag="RJ239_000037"
     CDS             complement(29401..29601)
                     /locus_tag="RJ239_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330204.1"
                     /translation="MGIVTSIRKYKNTLSKNVTILEGKKHFWDIKFKIKARVYPSFKQ
                     HLITFLGQSGHFGIFGIFYALD"
     gene            29896..30525
                     /locus_tag="RJ239_000038"
     CDS             29896..30525
                     /locus_tag="RJ239_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA family transcriptional regulator"
                     /protein_id="HDV7330205.1"
                     /translation="MQMQEVIEKLKDILASEGKRDLKTKDIAKELGIHPDTFNSMKFR
                     NSIPYPQILNFLNERNISINYFFYGSSPKDQLECENKYKILKLYKTNASLGGGGINDL
                     IDCSELIMDEKLLNFFGSKECEFITCYGESMEPLIKDGSICVIDRNKTFKNKSICVIN
                     TRDGLFIKQVLKQDDGVILHSLNPLYEDIFYKNGDFLLIGVVIGELSRL"
     gene            30606..30926
                     /locus_tag="RJ239_000039"
     CDS             30606..30926
                     /locus_tag="RJ239_000039"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330206.1"
                     /translation="MKDIKNYTDKELKEKIIQDLESEFRILYKKLLKEKDYLARDNIL
                     ELMTIYNMGINSYSIAKRFEMNEDKSLIQVPLFERYIIGRKFVVKYNDEKQRYELKST
                     FCEF"
     gene            30936..31130
                     /locus_tag="RJ239_000040"
     CDS             30936..31130
                     /locus_tag="RJ239_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330207.1"
                     /translation="MKYPNVYVKLVGEDGNAFSILARVSKALKKAGVSKEEISKFQKE
                     AMSSDYNHLLNVVQDWVNTN"
     gene            31210..31497
                     /locus_tag="RJ239_000041"
     CDS             31210..31497
                     /locus_tag="RJ239_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330208.1"
                     /translation="MSKVIVDIKKGFSKTFINAICNHNNELVLEYLKNGMSATKECMG
                     EEPMFYAITHNNFGAILLLLKYGAILDKEYLEESNKDFSKEALKFLSSFLK"
     gene            complement(31525..32340)
                     /locus_tag="RJ239_000042"
     CDS             complement(31525..32340)
                     /locus_tag="RJ239_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004297138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HDV7330209.1"
                     /translation="MKNNTDKFLKTSTLIKPTRTTLKAPFAWVGGKNYLAKEIIALMP
                     EHKSYIEVFGGALSVFYQKSASKIEVINDINDELINLHLCIRNKPQSLTNVLNSMIIS
                     RKIFHMLKNKEIKPRNDLERAAFYFYLISTSFGSSMGQFAMSKQRAPKRLCRDFSLHT
                     KRLKNASIENKSFEYILKEYDYNEALFYLDPPYVGTENYYKNTGGFGLKEHELLCNLL
                     KNIKGKFMLSYNDCELIRELYKDFNIKELKVRYSLNNNVLKRKESKELLIMNF"
     gene            complement(32542..33030)
                     /locus_tag="RJ239_000043"
     CDS             complement(32542..33030)
                     /locus_tag="RJ239_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HDV7330210.1"
                     /translation="MSEYIEIKGLENFFKACDKLIDMDKHGQSIMAGAGESIRNSIID
                     SFKNERSIFNGKWKSLKPATIKQKIKDGKNKGILKRDGELSNALNWQSEPTKSGVKVF
                     NNIQTENGFKYGYVHQWGNRKRKIPQRAFLPIDNNKVLHPSIRSVIYKDTKDFIEKIV
                     KK"
     gene            complement(33034..35250)
                     /locus_tag="RJ239_000044"
     CDS             complement(33034..35250)
                     /locus_tag="RJ239_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDV7330211.1"
                     /translation="MENAGSIGIGVILGLAIKNASAVGKVVKDFSNLEKIAAKTKLGI
                     SGLQKELNTLKLNANLRAELKAQRKGLQDEFLSLGNVIRGGIIGKGLGEAISFESAMA
                     DVRKVVNFDEGDDIKKMSADILKMSQTLPVTANELAAIAAAGGQIGLGSKDVREFTNL
                     VTKMKVAFDMSAEDVGDSVAKIKNILGISLKDMEDLGDSINNLSDNSASKAREIIDVM
                     KRTAAAGKQIGFTKEQIAALSSSFISLGKGPEVAGTAINSLYRVLATADNMGTKTESA
                     FAKLGISGAFLKQASFDDPQKALDMFLQRISKLDQKEQMGVLVDIFGREFADDMATLV
                     GGLDTYKEALKNAGDEAKKGSLQREFDTRAATTENSIILMKNAFNSLAVNLGSVFLPA
                     ISWVSAGISYLVNSITYITGLVPGLNGVLGGLIATFLLAKPAVLAYAIAKNYLKDCTI
                     LLKSALIKTRIHLLAFRNSCILSNITLKAKTVTTTIYTTSLKALSFVVGGLNKVFKAV
                     AIGIRVLSMAMMSNPIGLILGGIAIVAGLIIANWDKVKSWFKSFIEWLKPVWEPIYNV
                     IKAVFDKCALVFTSFKDIIMSVASPLAEFLNSIWQGVGDFFYSIFGSLFDWFASKLSW
                     VGDMISSISGFIKDALDFVGLGDDEEVKISQSEQNKEKVFTTNTYKDELAKTKSINHT
                     PSFNNGNINISVNGTFNIATKDGNFNMQEFANAIQKSVFDALRKQEQNKINTTIYG"
     gene            35292..35597
                     /locus_tag="RJ239_000045"
     CDS             35292..35597
                     /locus_tag="RJ239_000045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330212.1"
                     /translation="MKVLKFINDDIISHIALLLTTLIPAFYISYQSASDGFFNTMAIF
                     IFSYFASIIITAILVMIMPPIALLLILPTWLIVISLDFILFAILKIYFLKNKTIKNS"
     gene            complement(35709..35948)
                     /locus_tag="RJ239_000046"
     CDS             complement(35709..35948)
                     /locus_tag="RJ239_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HDV7330213.1"
                     /translation="MKEKIIKLENGEELKMREPNVRVLKNATNKGEKEMEQTICMIAA
                     LTNKQESEIEDLNLKDFKALQDALKDFLVEAGVIA"
     gene            complement(36101..36610)
                     /locus_tag="RJ239_000047"
     CDS             complement(36101..36610)
                     /locus_tag="RJ239_000047"
                     /inference="COORDINATES: protein motif:HMM:NF016846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HDV7330214.1"
                     /translation="MKRIIGEVIQEGNIYIDGQGYLGVVRNLKLPDIEQEMIETKGVL
                     GANYSSGVLKPLEISFKLAVVDPVLYAAFFHTTFSEIKAPLLFRESVHKGGKNYGIST
                     EFLGEFISISESDHESGKEVEAEIKMAVHFYMQRRNNIPIITYDHKNTILMINGVDMM
                     SDVRSNLTL"
     gene            complement(36637..37830)
                     /locus_tag="RJ239_000048"
     CDS             complement(36637..37830)
                     /locus_tag="RJ239_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath family protein"
                     /protein_id="HDV7330215.1"
                     /translation="MAANYGVNFNISNGAASPIKVQSDTPIGIAASLKGASKEMIYTK
                     AGYESVEAMPIFAFSNVNKAKEFVNDLIKENNLQDFRLLDTLECINLQNVSNVIIVSF
                     FEESEESENTLTNIVNAIEAFKKAKHKTGFSPDLIITPYYSHEAGVKAKLESVASSMN
                     ITAIVDLYATNVGEAINTMEAFSSKRLIATWPQVQILNTQGKYAYVPQSPIIAGLIAH
                     TDGDKEYGFSDSYSNRVMNGVTGTEHFIEFINGFDCDAERLRNAHISTCILGEGYRSW
                     GGETSHEDTIWQDLARVRTFDRIALAGQKAAFKAIDKKASELYFIKISIEELLRDLKG
                     AKVLIGYEVSWDEERNTDANVSAGKFYLNIKMMNNPIVKQITLEFIYSDKWASDLIKT
                     ISADS"
     gene            complement(37849..38856)
                     /locus_tag="RJ239_000049"
     CDS             complement(37849..38856)
                     /locus_tag="RJ239_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330216.1"
                     /translation="MKDYGISFIPDINQGSKEPSEPIVSDKLNAQKVNELIDKKLKLF
                     KEELVNKEELKSLIEEILQDQNFQNTNIKISKTPPNYNTQAKVGEIWAVLESKKQLFI
                     CTANDNDFTSWVDLLGDGSNDIIPKEKIIITFDNTTTGGQYGGCMSDLRLGFENGFAT
                     PNKVQDEYENAKFTMTKDGNGLNRSDFTIDSNPTPTDNQIVGTIKTSGIYQETYHKIA
                     HVFKKYNGGADECCLWSSSGSREVSIELENTPMPNKLFARGNGYYGQTEITNVRVKKS
                     IFIGEQEIQSEDFNVEKLEASSDTYGDYAFLFEISKQDQIVMKKELNLNPKKNKKYKK
                     M"
     gene            complement(38956..39327)
                     /locus_tag="RJ239_000050"
     CDS             complement(38956..39327)
                     /locus_tag="RJ239_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1353 domain-containing protein"
                     /protein_id="HDV7330217.1"
                     /translation="MTKTELKRVCVKPYDKDRFEVISDYAFSLPNYKGIVPQGFKTDG
                     ASIPRLFWSLFPPFKSEYFSACVVHDFLCEKANSRTDYRTADLALKEAMTLLGCSRLK
                     IFVFYHSCNLYHAIKCLIKGK"
     gene            complement(39324..39830)
                     /locus_tag="RJ239_000051"
     CDS             complement(39324..39830)
                     /locus_tag="RJ239_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4376 domain-containing protein"
                     /protein_id="HDV7330218.1"
                     /translation="MKYFIDKNDNNQIYAYEDEVSDEQIKTGLTPISEEEFNSLINPP
                     KSEEELLNEAKELKINEINTKKENILNGGFSFKGKIYQSSNEDQLRINGAVTNALVNP
                     NLIPYIDWIALDNSTTRFSVEEFKLFASSMAYFVQETIFKASALKEKARNAQSKEELD
                     LIVWESEK"
     gene            complement(39855..40886)
                     /locus_tag="RJ239_000052"
     CDS             complement(39855..40886)
                     /locus_tag="RJ239_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV7330219.1"
                     /translation="MAKSEYYTILTKIGIAKFIAARASGNGINLKSFKLSSKVILPSE
                     EMQSLEEIVYEANISSKSVDESNPNYVNLMCHVPSDVGGFEVNAVGVYDEAGDLLAVG
                     NVPRTYKPILKEGSAKELMIKIVMELSNAEEVILKLDPSVIMASRDYVDAIKVELNLK
                     IDALTQKYDAEFKKVWDELSKYLLENKFNTEIAKYVTLATNQTITGAKNFTKLPTSSI
                     KATNDNQFVNLATLKEQAPSLIGGLGVNQAWQNVSRAFDVTYTNNTGKPIAAKFQVNA
                     SASGGISFSCSEQFVVSMFQTSLSNGGVSRTYFGFGIIPPNGQYRLNTPEHSGFYPSK
                     SIVSFMELR"
     gene            complement(40886..41506)
                     /locus_tag="RJ239_000053"
     CDS             complement(40886..41506)
                     /locus_tag="RJ239_000053"
                     /inference="COORDINATES: protein motif:HMM:NF021220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HDV7330220.1"
                     /translation="MNTLILNHHPKQSKAIDLSAKTRFEDLNLASITNLALNCDERLL
                     PILANAYDVSIDGLNEKESRKLISKALLLDRYNGTTWAIKEALRAVFPTAVVKEWFNY
                     GGKPYFFKVKVSTTNVSFDERTLNTLERLIYDFKNVRSVLEAIEIEIESKNDSFNANA
                     QISGETIEILPFQTTFLENEIKSTKNAFGVFMCEISRTNIDFKGVY"
     gene            complement(41503..42669)
                     /locus_tag="RJ239_000054"
     CDS             complement(41503..42669)
                     /locus_tag="RJ239_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009650649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HDV7330221.1"
                     /translation="MSELLSVNDSYFKQSFLKDIPYPQIIEELDYEKLLKAYEELFKS
                     FLKDNVELLESDPFKAILEALAYREMIIRARINESIKATYLHYAKGSDLDNVVANGYL
                     IERLKGVKPTAKVEFELNTLLTYDVIIPKGAIFSNEKADLATLKEEVVIKKGQSKAQG
                     ILELDEFIQSKESKTEFLQTPLPFVAKIKQLEFFKGGASEESDEALRERAIMSVHRFS
                     TAGSEKGYIYHALSASAKVASIKALNNGAGKVRVIIKSEDELSVDVVKEYLSADERRP
                     LTDEVSVELAKKREFIVDAKLLLLELSRANEISEKINALQKDFDLSVDLALGFIYKCL
                     HQDGVYKSEILSIKEKIINEEEQELKDLPLENIIIADDEFATLSFSLSYEKAVL"
     gene            complement(42666..42956)
                     /locus_tag="RJ239_000055"
     CDS             complement(42666..42956)
                     /locus_tag="RJ239_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HDV7330222.1"
                     /translation="MNYMVSIEESIKDILITPLGSRVMRPEYGSLLYTLIDRKIDDDF
                     KIKLTRYTAEAISKWEKRVKLKGVRLNECKDNKLSITLLFENYGDLTMELGK"
     gene            complement(42953..43144)
                     /locus_tag="RJ239_000056"
     CDS             complement(42953..43144)
                     /locus_tag="RJ239_000056"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330223.1"
                     /translation="MKELFLLLFSLVFFMLFCMGAFYAFLNLNFFIKSIFIGFFIAFM
                     FLGFSQMLENIFEFYKGLK"
     gene            complement(43153..43785)
                     /locus_tag="RJ239_000057"
     CDS             complement(43153..43785)
                     /locus_tag="RJ239_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HDV7330224.1"
                     /translation="MNELGIICDIKEGKAKVAIGDMVTDFLSVFQSLANSYAVSFSPL
                     RIGEQVLVIPVRGDLNSGVILRGLYQEKHRAKNTDENTFNIDFEDGTHLEYNSKSSTL
                     KLDVVKNINITCVDKNTHNQNNTLNTKNHTTNANTITLNAPSINLNGNTQIAGAISTS
                     GEGGASGTFSIKGNLNLIGNLQVSGNISDSKGDLTNHTHSCTCGATASPR"
     gene            complement(43785..44099)
                     /locus_tag="RJ239_000058"
     CDS             complement(43785..44099)
                     /locus_tag="RJ239_000058"
                     /inference="COORDINATES: protein motif:HMM:NF027409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330225.1"
                     /translation="MKLEDIFVYMVLMIVSFIAGLVGIVTKNKLSKALNLKGKFTLFL
                     KGMLGSMFVAYLVFEIVNYLNFGIKLSVAVGGFAAYMGTDALLKIEQLVEKLINKKME
                     KL"
     gene            complement(44211..44459)
                     /locus_tag="RJ239_000059"
     CDS             complement(44211..44459)
                     /locus_tag="RJ239_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330226.1"
                     /translation="MNDKMRIFLLIIPFVFLSACASKDILIKTEIKEVKVPIKCPLKL
                     PLKPLDKKDLESAKEISKYYLEVENIAKLCTGEKDERK"
     gene            complement(44456..44797)
                     /locus_tag="RJ239_000060"
     CDS             complement(44456..44797)
                     /locus_tag="RJ239_000060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330227.1"
                     /translation="MFSFILSRFLSPSKIAFFVLIALCGFLYLKNNALALENENLKLK
                     ALHFSNEINVFKDKLAQQNKAIDKLKLDLKPKETLKEVLKVDKVFIKDKSCQSELKAY
                     KELFNILGAKK"
     gene            complement(44808..45197)
                     /locus_tag="RJ239_000061"
     CDS             complement(44808..45197)
                     /locus_tag="RJ239_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF882 domain-containing protein"
                     /protein_id="HDV7330228.1"
                     /translation="MKNNPYFKESEFKCKCGKCELPQNVPSDELIDILCEIREHYNAP
                     IIINSGYRCKEHNAEVGGAPKSQHTIGSAADFVVKGVKTEEVHQYVLNTYGERSLGIA
                     IKHNFNDPYAGFVHLDTRGKKARWTYP"
     gene            45346..45780
                     /locus_tag="RJ239_000062"
     CDS             45346..45780
                     /locus_tag="RJ239_000062"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330229.1"
                     /translation="MLKSFENELLELLKDFKVRMYLGEFEDTQNIASCINNLDASLLL
                     DFEGESYKDLENKVGTWKLYILTHTKSKAPKHRIDAKHKLFDAIEAVDKVLLNAEPSN
                     GFRIELKDLKKVYEGISDHGYLSIYARTLQSSFLPKDDFLRI"
     gene            45782..46597
                     /locus_tag="RJ239_000063"
     CDS             45782..46597
                     /locus_tag="RJ239_000063"
                     /inference="COORDINATES: protein motif:HMM:NF021627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330230.1"
                     /translation="MLFINKENLVEVSNDKPIKVAIKGEWKGHNNGRFKVDDKDLNSM
                     IDNFNQKKIDLVIDYEHQSLKNEKAPAAGWIKELYLENDALMAKAEFNEEAKKYIANK
                     QYRYLSPVFEFNSKDNKSGELVRAKLHSVALTNTPFIDELGELIANKNNIHQNKGEKM
                     DEKIKELESQIIALKNENSSLALQNEALKKQNEESVKNLASSLVDNALNSGKIANSQK
                     EWALMYACKDLEGFKSFLDTENDQVQVPKNNVFANKNTAKTNEFDVVKMMLGD"
     gene            46600..47127
                     /locus_tag="RJ239_000064"
     CDS             46600..47127
                     /locus_tag="RJ239_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330231.1"
                     /translation="MAKAKKETQNLENEDLETGDLSKALSLEDENLANEEAVSENETA
                     KEFINEEGEEMPSKVTPKSLSNDPLIAMPKSLESFINKDLFSINAKIDLETNESLALG
                     TLLISEDFGESFKKCPNEDISAKENVKLAMLKDHALRSGVYGVLLAGEINLKGVHVSA
                     VKKAFMQNLIINTKE"
     gene            47130..48107
                     /locus_tag="RJ239_000065"
     CDS             47130..48107
                     /locus_tag="RJ239_000065"
                     /inference="COORDINATES: protein motif:HMM:NF015802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HDV7330232.1"
                     /translation="MDLEQLLELFSSTKITEVINQTKASPRFVSDTFFKDKIPSLEST
                     VRVEIIKGAGIVLNSISDNGEHSLENTKDAYILNIPLPRFALAKRISASEINSLRSLA
                     LQEAQAKSLSGALGVLVKEMKESFNTTLEYMANGALFGKILDGKGNVLFDFGSASKKA
                     ISVKKDGSVTLASVCDAIDSAIIDEFGTSADYEVLCGNELFAAISNLALSEDLYKNHL
                     ASRDEKDKSLILYGTKYRRYSAKYKNTNGKSVEFLKGTEGMVVPKDNSNRIYYTRANH
                     TDALGKAPSLMFVSKPEILPRGAGIEIVGEMRAMPVCTRPNGLIKLVLE"
     gene            48223..48681
                     /locus_tag="RJ239_000066"
     CDS             48223..48681
                     /locus_tag="RJ239_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1320 family protein"
                     /protein_id="HDV7330233.1"
                     /translation="MNYQDILEEKLITETKTHFFMIDEKDLIKELSVHAIAELSDLNA
                     DGVCDKEVIDDAINDAQSYIASFIKIPKNPTPLLKDICVKLTIMELKRRNDFPKESLK
                     EIREWANDLLLKMANKKIPTEINEDNFISQNKVRAFKIKRKRMDLRRLNG"
     gene            48674..49273
                     /locus_tag="RJ239_000067"
     CDS             48674..49273
                     /locus_tag="RJ239_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004297483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1804 family protein"
                     /protein_id="HDV7330234.1"
                     /translation="MAKNLTSTTKPKMAKVGCGLQVGAESETPARKDKFTSSAKSQNN
                     LKDLAKELYIAGFDIFKIAKILNRNEKTIRNYKAKDGDWDKQKANLLTSKIKDKESAS
                     LYESFTEQMFCAIENINTDEKMNAEKKTEAIARIGDSFSKMRKVARLEDPSSYRLNVA
                     KKVVEIIISHLKNDKDCVAKLVSLLESGVIEKEILAMDI"
     gene            49273..50943
                     /gene="terL"
                     /locus_tag="RJ239_000068"
     CDS             49273..50943
                     /gene="terL"
                     /locus_tag="RJ239_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HDV7330235.1"
                     /translation="MLFSKEELDEFLISNEQKHENTPNELKGAMQRKDFLEWMDELKN
                     ELKTQFLHESHLDPTLKEERIKRASVDFDYFARTYFPHYFTIKGECGLHLHLNEVFTK
                     IALKKESKGEKHAIAAPRAHGKSTYTSQLFPLWCLVFNYKSFIVEISDAVELMEGMLE
                     AIKAELEGNPHLKLDFPEVVGIGKTWRVGEFVSNNGVKIKAFGSGKRLRGVRYGVKRP
                     DLVILDDLENDTNVRSKDQRDKLEDWVDEAVLNLGSADGSLDVLYIGTILHNDSVLSR
                     KLKLGFWNPKVFRSIEEFPQRLDLWDEYATLYRNTDFNTAHQFYLKNKALMDKGAKVL
                     WEEAKSLEDLMKLRAENLKAFNKEQLNNPRSENQIFSLDSINFYDVLPPISQYYMYID
                     PAGEKAKSDFTAITIIGKGAKGFYVAESIVKILKAQSIIKTIFNLQKIYKCRLIEIET
                     NGGQFFLKKWLQEKSLESGVFLPLRGKNNSVSKFERIESLSLAFENEELFLHKSQTML
                     INQLLEFPEGKNDDAPDSLAGAFLLARTKSSIKRRKHHFNSVSRIRRF"
     gene            50953..52323
                     /locus_tag="RJ239_000069"
     CDS             50953..52323
                     /locus_tag="RJ239_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 family protein"
                     /protein_id="HDV7330236.1"
                     /translation="MKKEIKSKREVILKNNSLINTLINSSYLNVLKISENDQRMIFKD
                     LSFTQAHQSRRSVILAKELQIVCENEKIKESFEYLFNPDLLSQILETYLYGLNIFEVN
                     YKLKDGFYYPILKQRDFRNFGFNENDELVYNGNGCEEIVEDKKAIYGLFGSNFLFKNG
                     DALLTKLYFPVKLKNASLKFWMEFLERFGSPWAVAKTDSDPDALASEIHQMLNGDSAV
                     IDKEEELDLIQPKAKANYNEIIDYLDNQIRSVVLGANLSSQVSGGSLAAAESHNQIRK
                     DLAAQDGQIVLFILNRAIKFFKEINHFKDELYVQFFSEAEPKSELCERDLKLFNMGFC
                     FDEEYIKSTYNVEGELIRETLEKKDFKDLENDKKVFENKVKLESFEEDFIDKGLEQKE
                     YLKVDESMSKFFQEQFESIVKDCKDFNEALNKLKENFSSLEQSEFEKHLFIALNNSSI
                     LGYLED"
     gene            52325..53563
                     /locus_tag="RJ239_000070"
     CDS             52325..53563
                     /locus_tag="RJ239_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002909482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330237.1"
                     /translation="MTGAKIGFFSEPTKAVDFLKNKKPELSFDYDELSYSTHKKVFTI
                     AKLMDESLLKDMQDTLVNAIKNGDKFSTWSKIAEEKLKAKGWWGSKEVINPKTGEVKK
                     THFNSARLKKIFEENSRKAKAKTIYENQMKSTKPYFKYCTQKDSLVRDKHRAFDSIVL
                     PKDDPFWDTHYPHVTMHDYGCRCKVINLGESEVKDLKIPPSNTKESEFNGFNDEELLD
                     ELYKQKNTEVIQNFIKLDMLSAAAKKTKEVKSFAHQKELYTWQKSLDDMVDEVLIKDN
                     QKYPINFIQVGKMDKSTKEFLEKLNKKDLEDLYFTLSKNNLLHASPKRKASYNQALSA
                     DEIKQIVKVLDEAKEVYWDNANNSLLYFFEDKKDASRINKIVITPDYKLKKFGKTNAI
                     VTLGKVEVINKDNKTYIKIR"
     gene            53689..54063
                     /locus_tag="RJ239_000071"
     CDS             53689..54063
                     /locus_tag="RJ239_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV7330238.1"
                     /translation="MVLALGEFEFKALNFDNLERSLEYNIQSQNRLNNHNALFASSKE
                     SEKIKIQGKTLPLKGDRNTYLDKLENMAKEQRSFILTGANGKYYGKFVILSLNENRSA
                     FVDGSGFVAQSFSMDLERDFDE"
     gene            54056..54247
                     /locus_tag="RJ239_000072"
     CDS             54056..54247
                     /locus_tag="RJ239_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HDV7330239.1"
                     /translation="MSKIYIAKNNERLDSIVYKHYGTLLYFNQVLLANPRLEPLLKTG
                     DKVILPSIEIKESKEKALW"
     gene            54241..55218
                     /locus_tag="RJ239_000073"
     CDS             54241..55218
                     /locus_tag="RJ239_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV7330240.1"
                     /translation="MVRKPKFKLIAKGEDITEKLSKNLISISYEDKEKAESDEISLSV
                     FGLYSKPLFGDSLELWLGFEKLYKCGSFSVNVVSKNYTSNTTEVRASAINFSGKGSVN
                     IKEKKTRSFENTTLFTIARKIANENNLKIKTSGEDQNIVSILQNNQSNLEFLYSICFD
                     YGFICCVKENTLIITPKDGKIGDNAANITSKNENLPLFEIALKECISLEISESARNEY
                     SAVIAEWQDINEAKIKSIKVGSGENIYKMQISQPKNDNEAFKKAQAKLNELQKGGLNG
                     RCELIGREIRAGGKLKIKDINMDHYEFSIKSVSHSFNDQAYIISVEFES"
     gene            complement(55215..55499)
                     /locus_tag="RJ239_000074"
     CDS             complement(55215..55499)
                     /locus_tag="RJ239_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002888031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HDV7330241.1"
                     /translation="MLSNNEYFEYFIDFVKNNDKREILKEFGGANIYIPSYKTLLRDE
                     ELKQDFKTLIKQGISTKNASVECAKKYDLSLNAVYLITKELRENLEPSLF"
     gene            55593..56264
                     /locus_tag="RJ239_000075"
     CDS             55593..56264
                     /locus_tag="RJ239_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HDV7330242.1"
                     /translation="MKKIISVLILALSLLNAKSFEESKKELVKFYNDLGSSYWYDFYC
                     QAPFKVNKKGKYISFEVIKSDLYAPRNEYTKKGKINQRIKRIEWEHIMAAQNFGKHLP
                     CWKEGGRKACKNDPTFAKMEADKQNLVPAIGEINGDRSNFRYAEAPTNLKYTQYGNCK
                     VYTDFKAKRFYPANYSKGWIARSYLYMSKTYNIKLSDQERKLMEAWDKQYPMDEKEKR
                     IRELL"
     gene            complement(56256..56531)
                     /locus_tag="RJ239_000076"
     CDS             complement(56256..56531)
                     /locus_tag="RJ239_000076"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330243.1"
                     /translation="MILEIHSYDAEFFLTLGIEKHSQIAFAAKRTSLEIMHNGITHQI
                     KTDKDFGILLNVVCNIREKLDESFDEEDKSLVIDIDEIVAKVCKELE"
     gene            complement(56578..57027)
                     /locus_tag="RJ239_000077"
     CDS             complement(56578..57027)
                     /locus_tag="RJ239_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002852108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1018 domain-containing protein"
                     /protein_id="HDV7330244.1"
                     /translation="MNTQNTLKKHLIKIIHTLRKDTNLSDDESYRWVLNERYGKASSK
                     DLSIDELRDFAITLGYDEKFLKKQNTKKARYFKKENTKSGRATKKQLNMIQAIWSKNA
                     KNPTQWALREFINNIVKKRPLHLWYLSIEDANKVILGLKNLENNSTH"
     gene            complement(57024..57716)
                     /locus_tag="RJ239_000078"
     CDS             complement(57024..57716)
                     /locus_tag="RJ239_000078"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330245.1"
                     /translation="MDNAKETLKELFGISEVQAVVIEKLYFKAKTPKDILGFKKYYDL
                     TMLKKQFVGTSYEKLSLVCAFAELDLNLRYKNIESFLEWLFISFSNRFIFQTKKGDFS
                     YSFVLRYYDGNIVYDELGKPVLKHVDCGDNLYFINANKELCDEQRKPLNAGEFYNKLV
                     EYMFKNQDKIIFDNKIEISPVIKTQIPSQTKINKDYEQNYLEYKKNQNKLYNANIDKF
                     TSKLEQILKAKK"
     gene            complement(57716..57985)
                     /locus_tag="RJ239_000079"
     CDS             complement(57716..57985)
                     /locus_tag="RJ239_000079"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330246.1"
                     /translation="MKFNPPSKEDLIKAIDEFNAKNSCSIPYFIADSFINYYKQDDGR
                     WLMANKKPLKCWKRALNSTWLPKLANKYKNKDKQKALASWLEEEF"
     gene            complement(57982..58944)
                     /locus_tag="RJ239_000080"
     CDS             complement(57982..58944)
                     /locus_tag="RJ239_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDV7330247.1"
                     /translation="MNLDFLNEFKLKNKDLNEKLEFLIPDFLVKKAITIIYANGGSGK
                     SYLSAAISKTLCKDVRVKSIVYIDMDNPLNVLNERGFSELILNESKFTYIHRSSLKTS
                     AYELLEMIENKGVAGSYEGVFFVLDSLRNFADIDNDTKMMSLMSLLMNLRECGATIIA
                     LHHSTKDGRAFKGSNHIRNSSDCMYFLQKVANLEQGFEVLLSVQKERAGIKDQAFFIN
                     TKTLNIKNTDLQNAKISDKEEAFIEKVLKLLKEKSLSTSEILSALDVSRSDNFSRNTL
                     EKFKGVFWESELGGENGRTFVWKSLKADNKDSNDKELSLFGDEL"
     gene            complement(59056..59472)
                     /locus_tag="RJ239_000081"
     CDS             complement(59056..59472)
                     /locus_tag="RJ239_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330248.1"
                     /translation="MKLQDFDFRIWDEDNEEFYKNPSIFKIKQIKGPHNVVLSSYSDN
                     ERINFEGYDRKFEVELFTRLYDKNGKKVYENDIVKAKNPFNYLEAKISIHKEGTFYLE
                     NKSGHYMGSLIYLVEDEGYTIEIIGNIHENPELLKC"
     gene            complement(59469..59741)
                     /locus_tag="RJ239_000082"
     CDS             complement(59469..59741)
                     /locus_tag="RJ239_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330249.1"
                     /translation="MYVNVSIDASDLEDFYAHDLAELFEDLSTKEQEEFFGIIHKDIK
                     PLERIRAILSNLSNDEALKLLKELNNEFKSDEEWQKTIKSINGGNK"
     gene            complement(59805..60017)
                     /locus_tag="RJ239_000083"
     CDS             complement(59805..60017)
                     /locus_tag="RJ239_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002903050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330250.1"
                     /translation="MRELSLAAFKLLNSVFKTKTAHFNDFLELDFKNKPKLKKQSFKR
                     KKKMTSKQKIRFKERLQSKKIRLKRI"
     gene            complement(60014..60499)
                     /locus_tag="RJ239_000084"
     CDS             complement(60014..60499)
                     /locus_tag="RJ239_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host-nuclease inhibitor Gam family protein"
                     /protein_id="HDV7330251.1"
                     /translation="MQINSFEDVNLALKKVAELSVQIEKINGEVTLACNEIKESRAGE
                     IKVLSDELGYIEACITTFCENNKHEFAEKRSKEFTFGKIGYRLSKSVSLPRVKEKLES
                     LIKAFKSYGLNECITYKEELNKEAIVELEDSTLVKLGLKRVTKDNFRIEPKIESLEIE
                     K"
     gene            complement(60608..60946)
                     /locus_tag="RJ239_000085"
     CDS             complement(60608..60946)
                     /locus_tag="RJ239_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330252.1"
                     /translation="MPLVYIASPYKGLAVQESRRKSLAISVAEQECLKIIRECEDFTP
                     ISPILQFSYLEENKHRDKALQMGRELLKACDYIYLSKHKDAKNSTGMQEELALAKKLG
                     IKELTLELPL"
     gene            complement(61042..61227)
                     /locus_tag="RJ239_000086"
     CDS             complement(61042..61227)
                     /locus_tag="RJ239_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002824157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330253.1"
                     /translation="MTTMIKGEKADYSASLFEVKGAGIYFKKSGTFVDVLKGIYPDYI
                     AQKILNFHLNKKLNKSA"
     gene            complement(61211..61414)
                     /locus_tag="RJ239_000087"
     CDS             complement(61211..61414)
                     /locus_tag="RJ239_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002891557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma-70"
                     /protein_id="HDV7330254.1"
                     /translation="MTFEEIAKELGISLTRVHQIYKHAIKKLRSPKNKDKWLAIFETL
                     DLIEQEKTKRNNLIQGVDHDNND"
     gene            complement(61417..62340)
                     /locus_tag="RJ239_000088"
     CDS             complement(61417..62340)
                     /locus_tag="RJ239_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDV7330255.1"
                     /translation="MQLVELTKKFLSTQNISQNNLSDRLGINKSYMVGYMKKGSSYKY
                     ASKVESLLEKYIKSFVEEKSVKELQTPFIATKDAKAINVTIESAMSNREMGVIIGEAG
                     TGKSRAIKEYATKNGTRVVLFEATTETSKRMLLVGLENKLNVCFKGSLDDKIRGIASE
                     LARTSKVLIIDESEHLPFRALECLRRIYDFSNTALILVGTRKLKNNLTGIGRNDYNEY
                     GQLSSRIGAKWELKGLCYQNKEGLKNEDLKTLCSYFNIEDKKAIDLVFNLARGNFRKS
                     EKLLKRACEFADGKAVELKHIEAAASFLMLG"
     gene            complement(62410..64485)
                     /locus_tag="RJ239_000089"
     CDS             complement(62410..64485)
                     /locus_tag="RJ239_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDV7330256.1"
                     /translation="MVYFLETKEAAQAFNVSTGALRLAASRNSNKYEWLKVDNEKGGR
                     GGKKLLFKISKDKLLTAFNQELITKNTLIYDEKMQKVKLSEIITTDNLKTINNSLKTS
                     NLNLTESKINDDLAVLNLKFENLSDELKEDAKSKVKLLKQVEKYIEGGLTLKRALFLC
                     NVEWRNYSNWRSDYKKYGILGLVDTRGLHRKDKTKLSAWMQEYALREYRTFGAGGFNF
                     TELWWQIHKEAATKENYDFIGFDLGEVKPLFSVKTLQNFIKNYYKDKPLEHCIITQGL
                     DRAKSKFLPAQGNQRELYDMKNMCWQIDSSPADIIVRDDETLEPFRPHILSVVDVFSG
                     MGVATLVSKSNSLSLTRLLWKAIDKFGKPDMIKGDNGKDYLSKDFQSLLDGLNITYDA
                     AIAYAGEQKALVERRFGTLQHAGISKMHGHIGNNLAKREMIEQKTPKKDRRAKDEYGF
                     AKKTNQKLLLTFSEACEFLEAEVIKWNMSKVRRKKGIKTPLELWNSCDRAIVKISYEE
                     FLFNAGNKELRVVGKKGINFESRVYKSALMPSVGTKVKCVQNIDNIKELFIYDLSGNF
                     LCLALDESIAKLSKESYKMLKKGYESEVKAIKEVLKKDEIAVFTKLNIKQDLQDLQSA
                     FENSLVEAKEVHQKSLAKETLKTQRELEEIKNNANADELILNAKKEINNDESEFDMEA
                     FVEKKYFAG"
     gene            complement(64482..64682)
                     /locus_tag="RJ239_000090"
     CDS             complement(64482..64682)
                     /locus_tag="RJ239_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330257.1"
                     /translation="MIKAYFENNAINVKAFARTHNISYDILHRIIKGEITGERNTKGS
                     TKAVFKKLLELGIINELPQGLK"
     gene            64827..65459
                     /locus_tag="RJ239_000091"
     CDS             64827..65459
                     /locus_tag="RJ239_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV7330258.1"
                     /translation="MTANDFKQIREKLGLTQEQLGNKLNLTRQQIINIEKGKTPISKK
                     YFDNISKLSKKFYIDKEENALNKDRNKQEINFYSIPKLNISASAGGGNELIGLEEYET
                     GEMLELSKAFFKTTPKNVKAIKVDGYSMIPMLLPDSWVIFEEIHEYQGDGLYILNFDN
                     QLMVKLLQLDPISKVLDIISVNKDYKSYSLDLKDSQVEIIIQGKVLRSII"
     gene            65601..66452
                     /locus_tag="RJ239_000092"
     CDS             65601..66452
                     /locus_tag="RJ239_000092"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330259.1"
                     /translation="MQKIDEVHKQRMQKINENFEKEKERKKDLKFNKFQTTSHEIFTI
                     KTPENEDVEVELACTAGLIQTSQIDYGEFVRKEFLYKCFPVTWNDFLKLNKYEKILAY
                     TVKDCNDIGLLKEVYEQMFKYLKWQSELPEYLKKDIRSRKRYLHEFSNPVQIKSKLSL
                     KAYRYYINFFLNEIPEGSYFPMQIMHRGDELSEALYNTYFLKDDESIDMYYPPNFYGD
                     TSSFDIVEPRFFNSREYYKNYKPFNRFDLKPHSDYDFNIPKYIVKHYLDMKTIVKEDE
                     HHKRIFC"
     gene            66570..66812
                     /locus_tag="RJ239_000093"
                     /pseudo
     CDS             66570..66812
                     /locus_tag="RJ239_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002859749.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(66836..67762)
                     /locus_tag="RJ239_000094"
     CDS             complement(66836..67762)
                     /locus_tag="RJ239_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HDV7330260.1"
                     /translation="MIDFSKKPLFLAPMAGFSDLPFRNVVKKFGADITISEMISSNAL
                     VYESSKTLHMLERAELENPYIVQIAGGDKEVLKKAVQMLNEMDFVDGIDFNCGCPVNK
                     VVKQCAGSALLENLELFKNLVGVIKENNKKSLTSVKFRLGFNEKYPEKMAKICESLGV
                     DFVSIHGRTRKQLYSGKTDYESIANAKASVKIPVIANGDINTQNAKEVYKITKCDGLM
                     IGRASVGNPWIFYEIKSGKSVDEKLKKEIILTHFDEMIKHYKDQGVSIFRKHLHEYSK
                     GHKDASAFRDEVNRIDNTEKMRKKIEEFFSLA"
     gene            complement(67759..68745)
                     /locus_tag="RJ239_000095"
     CDS             complement(67759..68745)
                     /locus_tag="RJ239_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330261.1"
                     /translation="MKIKLFLLASFIYIALIFAFAWHLELGSYTLNISTYTFELPIMI
                     WLVIPLFIYMILAVLHIAFYGFLRYLKFKHFFKDAAKFEAYTQDLLLEKDLKTTFQTK
                     EFRSVAQLFKTIKTHEKIPHSNKINEILDLIDGLNKNEFFNLSKFKLENNNVLYLQNE
                     KNHLKNDANYAYNKLKNLNEIKDEFEEIAFNTLIEKASYEQIKNVKIPKKPSEVLTLI
                     KRFKEGNLELSVAEYEVLLSHNILSEKDYLNAAKLSTKLLNPDAILGIFNKIKNEKSE
                     ALRAYLYLLAEFGLLDELREQIHNDDKKFNDFKAFLALREKNIKIDLNQLIQ"
     gene            complement(68735..69097)
                     /gene="dksA"
                     /locus_tag="RJ239_000096"
     CDS             complement(68735..69097)
                     /gene="dksA"
                     /locus_tag="RJ239_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK suppressor DksA"
                     /protein_id="HDV7330262.1"
                     /translation="MKKNEIQNFKNILEERKKAILENLQSNSNEIEALHNSVPSDSVD
                     FSVIETGSQIDFAISTNLKEELIEIEDSLDKIKNGTYGICESCDDEIDSQRLKVKPHA
                     RYCITCRQIAEQGKKHEN"
     gene            complement(69109..69558)
                     /locus_tag="RJ239_000097"
     CDS             complement(69109..69558)
                     /locus_tag="RJ239_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HDV7330263.1"
                     /translation="MQVNIFCIQKSDEFKTCSEKYSKLISKYATLKEINVFNKKIALA
                     QNLNAIEAKKSYEEAFMPYKKGYCIALDEKGKDLTSIEFAKLIQDKNELSFFIGGAYG
                     LREEFNQSLDFRLSLSKLTLAHQFVKTLLLEQIYRAFCINNNHPYHK"
     gene            complement(69560..70402)
                     /locus_tag="RJ239_000098"
     CDS             complement(69560..70402)
                     /locus_tag="RJ239_000098"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HDV7330264.1"
                     /translation="MNFADIFSKIRRQQPSVKEAPNHWVKCQSCHALMYYKEIESCFN
                     VCPKCNYHMRISADERIKLLSDEGSFIEYDANLEAIDPLKFVDSKSYKKRLSEGESKT
                     GRKSSVISGECEINGLKTQLVVFDFSFMGGSLGSVEGEKIVRAIQRAITSKTSLVIVS
                     ASGGARMQESTYSLMQMSKTSAALKLLSKEKLPYISILTDPTMGGVSASFAWLGDLII
                     AEPEALVGFAGARVIKQTIGADLPEGFQKAEFLLEHGLIDAIVERGEQKQYLSDVLKF
                     FSGK"
     gene            complement(70411..71133)
                     /locus_tag="RJ239_000099"
     CDS             complement(70411..71133)
                     /locus_tag="RJ239_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HDV7330265.1"
                     /translation="MKEFLDACLNANLQIRKYLNNIPQNDLKLCSKLGYDKNQGYELD
                     LKCEQIFIKYLSCFGQIFSEESGLIGKASPKQMILDPLDGSSNFVSKIPFYGTSIALM
                     EKDQAKSAFVCNLVSQEIFAFNNKQAFKSNLSDPKYSPLTPNLFSKIGIVEKISLYPE
                     LLDFLTKNQLKFRSLGATALSLAYASYFSFVLILGKTRIFDTAAALAIHQNLYIEKNE
                     NFLLLSQDKKIFDIILEFLKNN"
     gene            complement(71133..73352)
                     /gene="bamA"
                     /locus_tag="RJ239_000100"
     CDS             complement(71133..73352)
                     /gene="bamA"
                     /locus_tag="RJ239_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HDV7330266.1"
                     /translation="MKKHLISICALVAMANAATIKDIKFIGLNHLSNTSAINIAGLKI
                     GEEINPAKINTAILNLYKQNYFENIAVENNNGILEIIVTEKPTIAKVTITGIASNDRK
                     QVESILGIKRGTLLDEGNIKEAIERIKAYYEAKSYFDTIVEYKKKTLENTDGLELEFI
                     VNRGENIIIDNVHLSGAKKFSYSDIEPAVVNKEKEFMGWMWGRNDGKLKVFELSNDSS
                     RIADEYMKKGYLDVQVSSPYLKTYTDTYQANLTYFIKEGKPYKIKSISIENPLFDDKQ
                     NAQTVKDLRSSAGKTINIEDIRKDVKTIETQSADLGYAFVEVYPDIQKNDQTQEATVV
                     FKVIPHDKVYIRNVIISGNSRTVDRVIRRELYITEGNLYNRTDLSESKNALKRTSYFD
                     DVNIKEEKVDDTHIDLIVDVKEASTGAISGGIGYGSSDGILLNASLSDTNIFGSGIKS
                     SVSVDKSDDTLSGRISLVNPRVLDSQYSLGGTLYSNDYEWDNYSEKNYGFDITIGRQF
                     ARYYNVSLTYNLEQSDIYHLSPTLLRTGYELGKSIKSSITPAITFNDTDDYYLPRSGI
                     IASTSLEYAGLGGDQEFISSSSKFNFYQGLQDYIGYDLIYRYKASFYKVWDEGYLPIN
                     QRIYLGGIRSIRGFESRTVSPKNQWGDEIGGTIAFANSVELSFPLIDRIKLRGSVFFD
                     YGMIGRKNLDEIKRMSTGIGIEWITPIGPLQLVFAKPLNDKKGDDTNSFEFNLGTRF"
     gene            73429..74256
                     /locus_tag="RJ239_000101"
     CDS             73429..74256
                     /locus_tag="RJ239_000101"
                     /EC_number="1.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HDV7330267.1"
                     /translation="MKIAIIGLGLMGGSLGLCLKENKLISCVYGMDLSKENEKDALQL
                     GLIHELIEFKDLALCDMIFVATPVDAIIEILQKLVDLPSNVTIIELGSTKRKIIESLP
                     KNLIKQTLFAHPMTGTENSGPKAAFKELYKDAVCVLCDSEIADDLHQKRAVEIFSHLG
                     MKIVFMDSKAHDHHAAIISHLPHVISFSLANFVMKEEDKRNIVHLAGGSFKGMSRIAK
                     SSPQMWESIFLQNKDNLLSSIDFFQQELERCKQMIQLDKNDELREWMKQANTLREIL"
     gene            74336..75709
                     /locus_tag="RJ239_000102"
     CDS             74336..75709
                     /locus_tag="RJ239_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDV7330268.1"
                     /translation="MAKRKGKTYLSVLILVLIAILIFFISRLSIFEKNPPQILMPDVV
                     YTDLKKPILVHIKDDESSIKNVQIILHKDDNTSAMVIADEKISNLKDITLQVALPKFG
                     YKENVKSFVLEVIAKDSSFWNFFSGNEARKQIAVLVDNTAPKINIISNSYQIEQGGAG
                     AVVFKADDANLDKVYIETNKGKIFKATPYVKEGYYAALIAWDARDEEFRAFVIATDKA
                     GNISKERIRYYFVNRKYRVSNINLTDKFLDGKIENLANQYAPKDNNLNRYEKFKFVNE
                     TLRNSNEKLIHEITSKVPEEKIDNFDLNLFLPLKNGMKVADFADHRYYSYNGQFVSDS
                     YHMGLDLASVAQAPIISNNAGKVVFAAENGIYGLNLIVYHGFGVYSLYGHCSSKNVDL
                     DEMINKQSIIGKTGTSGLALGDHLHFGVLVQGVETRPEQWQDKKWIENNIYNVLNDGK
                     KIILGKN"
     gene            75709..76593
                     /locus_tag="RJ239_000103"
     CDS             75709..76593
                     /locus_tag="RJ239_000103"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HDV7330269.1"
                     /translation="MKQLTLAKTVKGVGIGLHKGEPIEITLEPLEANSGIVFFRSDLN
                     ASYKASPENVINTQMATVLGDERGFISTIEHLMSAINAYGIDNVRIVLNANEAPVMDG
                     SSISFCMMLDEAGVKELDAPKKIMVIKKPIEVRDGNKFVRLTPTKEPRINYTIKFDNA
                     VIGEQSYNFEFSKKNYIENIARARTFGFLKDVQALRSMNLALGGSLENTIVVDENRIL
                     NPEGLRFKDEFVRHKILDAIGDLTLLGYRVFGDYTSYAGSHHLNHLLTKEVLKDKDAY
                     EIVSLEKTTQKAYEKVFA"
     gene            76632..77033
                     /locus_tag="RJ239_000104"
     CDS             76632..77033
                     /locus_tag="RJ239_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine biosynthesis
                     protein TsaB"
                     /protein_id="HDV7330270.1"
                     /translation="MIGIYQDDKLIKTYKSEEKASEFLPKILDELLKEYDFTSLIYAN
                     GPGSYMGIKISYVSLSTLSIVKNIPLFAVSAFELNGYKPISANKNFCFVYKEGEICLE
                     QNIPAEFFLPKNLQELKLNNDNLPFYFLDAI"
     gene            77042..77920
                     /locus_tag="RJ239_000105"
     CDS             77042..77920
                     /locus_tag="RJ239_000105"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HDV7330271.1"
                     /translation="MKILVPATSANLGPGFDCLGLSLKLFNETQIQKSGVFSISIGGE
                     GSDNIFLKKNNIFVNIFYEIYEKLSGKKDNFRFIFQNNIPLSRGLGSSSAVIVGAIAS
                     AYYMSGFKVEKERILDEALIYENHPDNIAPATLGGFVCSLVEKNKVYSIKKEIDKDLA
                     AVVVIPNLAMSTEQSRQALAKNLSFNDAVFNLSHASFLTACFLEKKYEFLKFASQDKL
                     HEINRMKNLPELFEVQKFALENKALMSTLSGSGSSFFSLAFKDDALALAKKIQTKFKD
                     FRVQYLEFDDNGFEIC"
     gene            77945..78202
                     /locus_tag="RJ239_000106"
     CDS             77945..78202
                     /locus_tag="RJ239_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxR family protein"
                     /protein_id="HDV7330272.1"
                     /translation="MKKHIPIRMCIVCKNRFEQNMLFRFKVVLGDIVPKAEHGRSGYL
                     CQNCIEREDKVLQKAFSKICKNLNTKITQQGLKEIFLNGKD"
     gene            78189..80804
                     /gene="infB"
                     /locus_tag="RJ239_000107"
     CDS             78189..80804
                     /gene="infB"
                     /locus_tag="RJ239_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HDV7330273.1"
                     /translation="MAKIRIHEIAKELGYDSKEIIEKANELGLGIKTASNAVEPEIAA
                     AIYEYIQTREIPEAFKKNIKTPTAKKPKKENIKEQEKLNESEKKEPKKEEKLKQEVKK
                     EELKTEKENAKEEEKQEIIDTHKPQSLASATLAKRRGLVIVKKKKDEEEIQVKKEEVK
                     NSNDISINNEERLSLKTMFSNADESLKKKKKEKKSFVASKKESTEKMNFLDEHDFGDI
                     SLDDEDEVVLPDFSIKEQEKPQNINKKQPNFIRQAVGNSAGFGLEGGIQRRSRKKPSK
                     KIEKKEVEEVGSVAISKEIRVYEFADKIGKSTSEVISKLFMLGMMTTKNDFLDEDAIE
                     ILAAEFGIEINIINEADEFDYVKDYEEETDEKDLVTRAPVITIMGHVDHGKTSLLDYI
                     RKSRVASGEAGGITQHVGAYMVEKNGRKITFIDTPGHEAFTAMRARGASITDIVIIVV
                     AADDGVKPQTKEAINHAKAAGVPIIIAINKMDKEAANPDMVKTQLAEMEIMPVEWGGS
                     YEFVGVSAKTGMGIEDLLEIVLLQADILELKANPKSFAKASIIESSVQKGRGAVATII
                     VQNGTLTVGSTVVAGEAYGKVRAMSDDQGKALKEIKPGECGVIVGLSEVADAGEILIA
                     VKSDKEAREYANKRHEYNRQKELSKSTKVSIDELGAKIKEGNLKALPVILKADVQGSL
                     EALKASLEKLRNDEIKVNIIHSGVGGITQSDIELASASENSIVLGFNIRPTGEVKERA
                     KDKGVEIKTYNVIYNLLDDVKALLGGMMSPIISEEQLGQAEIRQVINVPKIGQIAGCM
                     VTEGVINRGAKIRLIRDGVVVYEGNVSSLKRFKDDAKEVAKGYECGVGIEGCDDMRVG
                     DYIESYKEVEEQASL"
     gene            80801..81163
                     /gene="rbfA"
                     /locus_tag="RJ239_000108"
     CDS             80801..81163
                     /gene="rbfA"
                     /locus_tag="RJ239_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HDV7330274.1"
                     /translation="MNPSEIKKLRTESILKELIPEALANLDDENLKNLCVVDVECKKG
                     RYDAFVYLDKMFFNVHEQEKILSSLKKASRALQNYCMSEQGWYRCPNFHFKFDDRLEY
                     QNHMDALFEKIKKDKNES"
     gene            81153..81596
                     /gene="rimP"
                     /locus_tag="RJ239_000109"
     CDS             81153..81596
                     /gene="rimP"
                     /locus_tag="RJ239_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HDV7330275.1"
                     /translation="MNLEALCKEVNLELYDSELTSENGKKIYRVYVMKPLDEKGERRG
                     VNLDDCARLSEILSPIFDVEPPVSGEYFLEVSSAGLERKLSKIEHFAKSINELVKITT
                     GEKEKIEAKIISVEDENITLENLENKEKTTINFNDIKKARTFIQW"
     gene            81669..83444
                     /locus_tag="RJ239_000110"
     CDS             81669..83444
                     /locus_tag="RJ239_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDV7330276.1"
                     /translation="MLEDKYDWKISKADQNGNVYYYFPKDEDEFKEAVVKNGGMSVYV
                     YQEGKFIDEFHTKSQGDKWTSSILNYLKTMSKDGEIFYRYYKNCKFFAIPKNTFSKDD
                     FKIIKDNINNNISLNQILYGSPGTGKTYHTIDKALEILGENLESRDEKKAKFDEYVKN
                     GQIVFTTFHQSYGYEEFVEGIKPSLNSDENSQINYKVKDGIFKELCKKALENRDDIES
                     FNFYINDLKEKTKEDANNPEKYFQLPNTKYSIQYRGGKTFRIKFDDMSKNHKDYPVSI
                     DNIEKLYKTSNIDEIYNSAYVKAILNYLKSQGLKDYKEKDEKINLPYIIIIDEINRGN
                     VSKIFGELITLIEPSKRLGNEEALELTLPYSGEKFGVPKNVYIIGTMNTADRSITSLD
                     TALRRRFEFVEMMPNSDLLNNVFICKDVENPNEDEDYLGDDAKTEGYAEILQNILISI
                     NKRIEFLLDREKTIGHAFFMSEAVKFNKNNWIKPDEYEEDWYVLSISKLKKVFQNKII
                     PLLQEYFYNDYALINAVLNDNGMIFEDKKDDKYLQKIKNLDSVNSERSIYNIASFDDK
                     IWDKIEIYQAIYNDEIANKLKNENE"
     gene            83437..84768
                     /locus_tag="RJ239_000111"
     CDS             83437..84768
                     /locus_tag="RJ239_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="McrC family protein"
                     /protein_id="HDV7330277.1"
                     /translation="MNSIFSIIEYQAFSKEDLKEIFKEKAEGFYKELEDFAKNNENLL
                     GFKNKNSLKAKNYVGIIQTKSGVLEILPKCTNLDSYKKEDSSSNHDKEKLRRCYELDN
                     ISKNNDFYEKDFKFNPKNLLINMLKTLKNSPFKKSQISSLQSSKIPLFEVFITMFLDE
                     FDSVYKKGLMRSYLSCEENRAFLKGKLLFNEHIKRNLIHKERFFTSNDEFVLDIAPNR
                     LIKSTLNFLKSKTSLNKFRLIKSMQILDEVEFSKNYEKDFSYKISRHFDYYENLLLWC
                     KIFLKNESFMPYHGKNEAFALLFPMEKIFEDYVAYMLKKVNPAQDIKVQNNGKYLISK
                     NDENCFMLKPDLYIENKMILDTKWKIPNDSEDEKKQGIEQSDLYQMFAYACKFKIYDI
                     KLVYPLCEKTQDLQRKIAEKFFVFKASEHLYFKEQGQKDIKVQVCFAPLPF"
     gene            complement(84757..85560)
                     /locus_tag="RJ239_000112"
     CDS             complement(84757..85560)
                     /locus_tag="RJ239_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDV7330278.1"
                     /translation="MLEILNFTFFQNALLGAILVSIACGIIGTLVMINRLFSMAGGIT
                     HGAFGGIGIAFYFSLPILLSTGIFTLFLAFLVAFLAKRYEHRSDSIIAVIWAFGMAVG
                     IILIDLSPSYNTDLMAYLFGSILAVGTQDLWLMALVDSVVVLLIFLFYRQFEALSFDA
                     EFAKVRGINTSFFHYLLIALMAFCIVISIRLVGLILVMALLSIPSFIAENFTKKLGFI
                     MVLASFLSMIFCVLGLILSYYLNLSSGACIIAVACFGFLMHLIGKFLKR"
     gene            complement(85553..86407)
                     /locus_tag="RJ239_000113"
     CDS             complement(85553..86407)
                     /locus_tag="RJ239_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HDV7330279.1"
                     /translation="MLFFEISNLNYAYDNEIILKNINLSYDNKDFLSIIGPNGAGKST
                     LVKLILGLLKSKNEIHFKALQRKEIGYVPQHTLANPNFCPRVLEIVLMGLVSKKIFGF
                     YGKKDKEKAMQALKSVGMEKFWNKTIDSLSGGQRQRVFIARALASECKMLILDEPTAS
                     VDNKSAIQIFELLSSLHQKGMGILLICHDINLVLAYSDKIAHLNKELFLHTNTKEKEK
                     SSFLKHLYENHSHFCDVEMSLNTCFCDEKNCDSKKLCEQEFTRRNLKKTEFKKENFCL
                     KFSKENNA"
     gene            complement(86420..>86775)
                     /locus_tag="RJ239_000114"
     CDS             complement(86420..>86775)
                     /locus_tag="RJ239_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HDV7330280.1"
                     /translation="AELDSLNLQIASKLEKLKNREFVVYHPSWTYFAKRYNLTQIPVE
                     ILGKEPKSKDLQKLITLMKDKNLKVIFVQNGFPENAAKTLAKECDAKIYKIDHLSYDW
                     ENELLKTADAFSHNL"
BASE COUNT        30808 a        12363 c        14256 g        29348 t
ORIGIN      
        1 aaaatactta atttatcgta tttgaaagca gtttacttat taatcaacta ttaactaaaa
       61 atgcgatatc attattttat gatttaaatc aaaaattttt gatttaaaat taaaatactt
      121 ttatgaaagg ttcaaaatgg gaacaagaaa agaacatgat tttattgggg aattggaaat
      181 ctctgatgag gtttattatg gagtgcaaac ttttagagct gttgaaaatt ttgatatttc
      241 tcatgataga ttaaaagatt ttcctcgctt tgttagggct ttggctagag taaaaaaagc
      301 tgcagctatg gcaaatcatg aattaggtct tttggataaa aatatccaag atgcgattat
      361 taaagcgtgt gataaaattt tagaaggtgg gtattatgat caatttgtag tagatatgat
      421 ccaaggaggt gctggaacaa gtacaaatat gaatgctaat gaagttatag caaacatagg
      481 acttgaactt atgggtcata aaaaaggtga ataccaatat cttcatccaa atgatcatgt
      541 taatttaagc caaagtacta atgatgctta tcctacagct ttacaccttg ccttgcatga
      601 ttatttaagt gatttggcaa aagctatgga acatctaaaa aaagcttatg agagaaaagc
      661 tgaagaattt aaagatgttc ttaaaatggg tagaacccaa ctgcaagatg ctgtacctat
      721 gactttaggt cgtgaattta aaacttttgc cgtaatgata ggtgaagata tacaaagagt
      781 attagaagct agaaaattga ttttagagat caatttgggt ggaactgcta ttggaacagg
      841 aattaattct catcctgatt atccgaaggt tgtagaaaga aaaataagag aagtgacagg
      901 ttttgaatat actgtggctg aggatttaat cgaggcgact caagatacgg gagcttatgt
      961 acaaatttca ggtgttttaa aacgtgttgc aacaaaactt tctaaagtat gtaatgactt
     1021 aagactttta agtagtggtc caaaatgtgg tcttaatgag attaatcttc caaaaatgca
     1081 accaggtagt tctatcatgc caggtaaggt aaatcctgtt attcctgaag tagttaatca
     1141 agtttgttat tttgttattg gagcagacgt aactgtaact tttgcttgtg agggtggaca
     1201 attacaactt aatgtttttg aaccagttgt agcatatagc ttatttaatt ctgttgtaat
     1261 gctagaaaaa gcaatgtata ctttagctga taaatgtata gatggtatta ccgcaaatga
     1321 aaaaatttgt tcagactttg tctataattc agtaggtata gtaacagctt taaatcctta
     1381 tattggttat gaaaattcag cttctatagc caaagaggca atgaacactg gaaaaagagt
     1441 ggctgatatt gcgcttgaaa gagggctttt aagcaaagaa caaattgatg aaattttaac
     1501 tccatcaaat atgctaaatc ctcacatgga agctaaaaaa tagcacttag gatttaatat
     1561 ggatataatg ataattttgc aagtaatcgt ccttcttggg gcgattttta tcggtattcg
     1621 cctaggtggt attgctatag gttatgctgg aggattaggt gtagttatat tagggcttgt
     1681 tttaggtatg aaacctggta atattccttg ggatgttatt ttaattattg ccgcagctat
     1741 tgcagcaatt tctgctatgc aacaagcagg tggacttgat tacatggtaa gggtgacaga
     1801 aaaaatttta agatcaagtc ctaaatttat aaattattta gctccagctt gtgggtggtt
     1861 gcttacaatt ttagcaggaa caggaaatgc ggtattttct ttaatgcctg ttgtagttga
     1921 tgttgcaaaa tctcaaaaca taaaacctag tgttccactt tcattaatgg ttgtttcttc
     1981 gcaaattgga atcactgctt ctcctgtaag tgcagctgtg gtttatatga gcggagtttt
     2041 agagccactt ggatggaatt atccaacttt aattggaatt tggattagca caacttttgt
     2101 agcttgtatg cttgcagctt ttatagtgag tttaatcact cctatggatt tgagtaagga
     2161 tagtgtttat caagaacgat taaaagcagg acttgtaaag gatgcaggag ctgttttgca
     2221 tggcgaagat aaaccaggtg ctaaactttc agtggtaatt ttcttgatca ctgttttggc
     2281 agttgtactt tatgcaaccg caatttcaag taatattaaa tggattgatc ctgttgtggt
     2341 ttcaagagat gcagctatta tgagcttttt acttactgca gcaactttga tcacttggct
     2401 ttgtaaagtt gaaccaggta aaattcttga cactagtgta tttaaaagcg gtatgactgc
     2461 ttgtgtttgt gtttttggtg tagcatggct tggaaatact tttgttgcag gacacgaagc
     2521 ttctatcaaa gaagtagcag gcgactgggt taaacaaacc cctgctatgt tagcagttgc
     2581 atttttcttt gcaagtatgc ttttatattc tcaagcagca accgcaaagg ccattgtacc
     2641 tgtaattatc actgctttag gaatttcagc agcaaatccg catgattctt atatgcttgt
     2701 agcttgtttt gcagcagttt cagcactttt tgtacttcca acttatccga ctttgttagg
     2761 tgcagtgcaa atggatgata caggaacgac tagaattggt aaatttatat ttaatcactc
     2821 attctttata ccaggggttt tagctattgc aattgctgta gcattaggct ttgtattagc
     2881 tcctatgctt atttaaatca aaccctaggt ttttctctcc tagggttaaa attttttcat
     2941 tagtttttaa gtatatacta cgctataata ttcattttta attttcttta agaaaggaat
     3001 ttaatgaaga taaaagttgg gttgattttt tcaggtattg cttgcctttt tttaacagct
     3061 tgtgttaatc aggttaaaca aaatacaaca tttgaaaata ctttaacaca aaaatattgt
     3121 ggtgatgatt ttttcaatca aaatttagaa aaaattaaaa aaaatgatga tgtcatttat
     3181 acaggattaa atgcaggttt gattgctaga aattgtggtg attttaataa aagtaatgta
     3241 ttttttgatg ctgtagaaga atcttataaa tatgatgtgg atttagaaaa tgtaagccct
     3301 aaagcagcta aatttattgg tacaaccttg cttaatgata atatagtaga ttatgatggt
     3361 tctttatatg aaagaattat ggttaatata tataaagctc taaactatat ggaagaagat
     3421 gattatgaaa atgcaagagt tgagtttaat cgtgttttaa tgcgtcaaga taaggcaaaa
     3481 gaatattttg ctaaagaaat tgaaaaaaat cgtgctgatt tagataaggc aaaagaagat
     3541 aaaaattatg ataaaaatat gaatgaaaat tcaaaagtta tagaagcgca atatgacaat
     3601 ttatttaaag aatttgatac aacaaaaaat ttcataaatc cttatgcgac ttatcttgct
     3661 tcaatatttt tctttatgga taaagattat agaaaagctg cagatttatt tagagaagta
     3721 gctattattt atccaaaaaa caaaactatc aaaaaagagg ctaaaatttt taaagaatat
     3781 gccacaaaaa taaaagtcaa aaaagctaaa aaatatgttt ttgtagttta tgaaaatgga
     3841 tttggtgtag ttaaggatga atttgcttta accttacctt ttatagtgga taaaaaaatt
     3901 attagcacaa atattgcttt gcaaaccttg aaaaaaaggg aagcttcttt tgcaaattta
     3961 aatataaatg gtcaaaatac aaatgatttt gtagatttag acaatattgt cgctactgaa
     4021 tttaaaataa atatgcctgc aatgattgct aaagccttag ctcaaactat aattaaaacc
     4081 actttaaatg tagctgttgc aaataatgac tctacaggtg gatggctaag tcttgcaaca
     4141 gcagtagcaa ctgctgcaac caataaagct gatgtgcgtt cttggagagg tttaccaaaa
     4201 agtattgcca tagcaacaat agaaaacgac ggaaatttag aaatcaaaga tccacaaggc
     4261 aatattttgt ttcaaaaatc attggataaa aataaaaatg ctcttgtgat agtgcgttct
     4321 tttgctccgt atttacccgc aagtgttgct atcatggaaa aataaggcta aaagatgaaa
     4381 aaaaatattt tatttatttt aatgttttta cttagtgctt gtgcaccaag ttatcaaata
     4441 aattcaaatc aaaatactgt aattttaggt tcaaatttac caaaaagttt agtaaaacaa
     4501 tttcaaaagc gtataaatag caatggttat ttagaatttg aagtgatttt gcgcagtact
     4561 tttgctaaag atgtaattta taaagtagat tggttagata aagatggttt tgtgctaaga
     4621 gatgttttaa atgaggacta tcaagccctt agaattccag caggacaaga ggtaattctt
     4681 cgtaaacttg catctgatac aagagcgaat gattttagat tagaaattaa agcaaaaaat
     4741 taatctcatt ttaggaagga taaatcatga aaaaaacaaa aattttagga acagctctta
     4801 ttggagcttt gctttttagt ggttgtgcgc aaacagctta tacagatgga aaggcaagtc
     4861 aggtaaaaaa aggcgatgct ttaaccttgg gtcttgatag acaagatttt gaaagtgcag
     4921 ctgaaactat gataaatagt atgttaagcg atcctgcttt tgcaaatatt aaaccaggta
     4981 caagaaaggt tattgctatt ggtagggttg tgaatgatac cccgcaaaga atcgatactg
     5041 aaaaactcac cgcaaaaatc acttctgcat taagaaaatc aggtaaattt gttctaactt
     5101 cagcagttgc tgcaggcgga gcacttgata gcatgagtga agatgtaaga gaattaagag
     5161 ataatgatga gtttaatcaa aaaaccatag caaaaaaagg gacattggta tcgcctgatt
     5221 tttctcttgc gggtaaaatt agacaagata atgtaaaact tagcaatggt aaaactcaag
     5281 tagaatactt tttcttacta agacttactg atttaacatc aggtttagtt tattgggaag
     5341 atgaacaaac tattgataaa accggttcta gtaaatcagt tacttggtaa aataaaaatt
     5401 aatttatgaa taaaattttt tagctcaagt gtttagcttg ggcttttttt atgattttta
     5461 aaaggatacg aaatgaaaaa atattattta tcggctcttt agttatggca agtttacttt
     5521 atgcacaagg ttcccagcct gtagaaatta cacaacaaga tataaatact caaaatgaaa
     5581 tgtctgacgc aagtactaag gatattaccc caaaatcaat tgaagatttt tttgaagaat
     5641 ttgcggataa tttcggtata gaatatggta taaccaaaga tggaaaaact ttttatacag
     5701 gaaaaagtac tgttgctgta aatgatactg atccacaatt tgcacaagct ttacaaaatg
     5761 cttaccaaaa agcaatgtta aatttgcaaa gcgaatttat aagagatgct tttggaagaa
     5821 ttgctacaag caagattcaa aattatgaag cagataattc tacgaatgct aaggaatttg
     5881 atgaattgcc aaaaggtgat aaggttgatc aaattttaaa taaacttaca caattagctg
     5941 gtgctcagct tgataaggca ttaaaagatt taggtataga tacaaattct ttaagcgaag
     6001 acagaaaaaa gactttatta aagcaagaat ttcttaataa aactatgaca aatgccatag
     6061 gttctatgag tggacttgtt cctgtgcaaa ctatagttac acaaagaaga ggtgagtatg
     6121 atgtaggtgt tgttgctgtt atttccaata aaactcgcca attagcaaaa gatatggcac
     6181 tagcaagaca gagtgctatt aagggtaaag gcaaggcaat aagtgagtat ctgccaaaag
     6241 atacaaaagg ctttttaaat gaatatggaa ttcgcttagt ttatgatgaa aatggtgcac
     6301 ctattatttt aagttatgga aactggggtt atgtagcaga tcctagcaat gctaaaaaaa
     6361 caaatatttt agaagataga gccaaagaaa cagcacttac tatggctgat gctgctatta
     6421 tagagtttat taatacaaat ttaagtctta aagatgaaag aacaactggt gatacttacg
     6481 aggaaatcat caaacaaagt attaatgtta atgatagttc cactcaagaa caaactcaaa
     6541 acataacaaa tattattgac aaagtaaata gtaaaataaa agcaagcgca agcggtaaaa
     6601 ttcgtggtat tcgtactctt aaaaaatgga gctatacaag tgaaaatggt attgaacatg
     6661 taggagctgt gagattttat tcttatgaaa atttagctaa cacaaatgag gctttaaatt
     6721 caaagtcaaa tgcaacaaaa aatgaagcta aaaaatcttc tagcatacaa agaagttcta
     6781 atgttgtaaa tagcatggat gatttttaaa ggtaaaagat gaaaataatt aaaattcttt
     6841 ttttaggctt atttttaagc ctaagtctta atgctaaagt tataaccaca acttcaacaa
     6901 aatcaagcac aggtgaaggc acaggcttga ctagggaaga tgcgataaac aatgccatta
     6961 tagaagctat aggaaaaatg agtggagtaa gcatcaattc tcttaagaaa tctaacacta
     7021 gcgtttcaac tgataattca ggttcaaata tacaagataa ttacagcgag caaatttcaa
     7081 aagccaccaa aggtagagct gatacttatg aaatcaatag tgttgaacaa gatgcaaatg
     7141 gtaaatatac agccaatgta acgattttta aaaccacaac aacaaaaaag tatcaagctc
     7201 caggtttaag tgcagataat agaagaagta ttactgtttt tgattctact ccagatgctg
     7261 caaaaagagg tataggctca gctttgcaac aaaaaatcat ttctgattta ttgcaaagtc
     7321 gtaaatttaa tgttttagac cgtgattcta gtggctatta tgaaatggaa aaagctttaa
     7381 tcaaaagtgg cgacgcagct agcgatgaag tttataaact taaaaatatg ttagcaacag
     7441 attatatttt attgttttct atttcaggac ttgaaggtaa acaaaaaaca agcaatttaa
     7501 caggaaaaag caaaactgaa attgaagtta tcgtagatta tcgtgtgctt ttatttgcta
     7561 caagacaaat taaattttct aatactttaa gcatgaaagt caatcttaaa gacaatagtc
     7621 ttagtgccaa tgaaaccgca ctcaaacaaa ttgcaaatcg tatagcagga gatattttaa
     7681 acgcaattta tcctttgaaa gttgcaagtg ttgaaaacaa tgaagtaata ttttctcaaa
     7741 gcttaaatca aggtgatgtt tatgaatgtt ttgctcttgg gaaggttata aaagatactt
     7801 atacaaaaga aaatacagga agagtagaaa gcaaaacagg aagtattgaa atcactcgca
     7861 caagccctaa attttcttat gcaaaaatca cagaaggtag tgtaaaagtg ggcgatattt
     7921 gcagaccttt aagtaatact ggtagtggaa atggctacac tataggtcgt gatgcaaatt
     7981 atcaaaccca agaaggcggc ggagtaaatc taggctttta aatttttaga gtttgatttt
     8041 tctcaaactc taaactcttt cttaaattca tcaaaaatta aagaaaaatt ttgtaaaatc
     8101 gaaattttat taaaccacta aagcttttaa atccgttatt acggtgcttt atggtactac
     8161 caatttataa ggaaaagcaa tgtatgctat tatcaaacac agcggaaagc aatacaaagt
     8221 aagtgttggc gatgagctaa aactagatca ctttgaagct gaaagcaaag caagtattga
     8281 agtaagcgaa gttcttgcta tcaatgataa agaattaaag gtaggtgcgc ctttcgtagc
     8341 aggtgcaaaa gttgttttgg aagtgatcaa tcacggaaaa gataaaaaag ttgtgattta
     8401 caaaaaaaga cgcagaaaag attctaaact caaacgcggt tttagaagac aatttactcg
     8461 cgttgtagta aaagatatca aagcttaagg agtaaagaat ggcacacaag aaaggtcaag
     8521 gttcaactca aaataaccgc gattccatag gtcgtcgttt aggtgttaaa aaatttggtg
     8581 gcgagtttgt tagagctgga aatatcatca tccgccaaag aggaactgca actcatgcag
     8641 gtaacaatgt aggcatggga aaagatcata ctatctttgc tctaattgat ggttttgtaa
     8701 aattcgaaag aaaagacaaa gatagaaaaa aagtttctgt atatcctgca taagttttta
     8761 ggacgctttt tagcgtcttg aaaactttaa atttataaat ttaacttctt ttatttactc
     8821 aaatttagct ttataaattt aaagtcaaag gcaatttaaa tgtttattga tagtgttaaa
     8881 attactttag cttcaggcga tggtggcaaa ggtgctgtaa gttttcgccg tgaaaaacat
     8941 gttccacttg gtggccctga tggaggagat ggtggaaatg gtggtgatat tattttcgta
     9001 tgtgataata atacccacac tcttgtaaat ttcaaaggca aaagagaatt acgcgcgcaa
     9061 aatggtgctg gtggaatggg acgcaataaa aatggcaaaa agggtgaaaa tttagaactt
     9121 atagtgcccg aaggaacgca agttatcgat gcacaaacca atgaaatttt acttgatctt
     9181 accaaagaag gacaaagaga gcttttttta aaaggtggaa aaggtggact tggcaacacc
     9241 cattttaaac acgccaccaa tcaacgcccc gattacgcac aacctggtat aaaaggagaa
     9301 agtcgcttag tcagacttga acttaaactt attgccgatg tagggcttgt gggctttcca
     9361 aatgtgggaa aatctactct tataagcgtt gtttcaaatg caaaacctga aattgcaaat
     9421 tatgaattta ccacccttac tccaaaactt ggacttgtag atgtaaatga gtataattcc
     9481 tttgttatgg ctgatattcc agggattatc gaaggagcaa gtgggggtaa aggcttagga
     9541 cttgcctttt taaagcacat agaaagaacg agctttttac ttttcgtgct agatcctatg
     9601 aggcaaatgc ctttaaaaga acaatttata gtactaagaa aagaacttga aaaattttcc
     9661 aatgaacttt ttgggcgtaa atttggcatc atgatttcaa aaagtgatag tgttcgttta
     9721 ggagaggaat ttgctgagca aattgcttta aacattaatg agttagacaa ttatctcaaa
     9781 gaaataaata atccacaaag ctttttaatc aaagtctcaa gccttgaaaa aacaggactt
     9841 aaagaactta aattcatgct tttagaagaa attaaaactt taagaaataa caaaaaaaat
     9901 ttaacaatct aggaagtgtt ttatattaaa aatttcaaac actccctatt ttttcaaaaa
     9961 taactagttt atatgaaatt ttggctaaaa ttataaaaat ttttcaagga ataagcatga
    10021 aaagaatagt tgttaaagtg ggttctcatg tgattagcga agaaaacact ttaagttttg
    10081 agcgtcttaa aaatttagtc gcatttttag ctaaactcat ggaaaaatat gaagtaattt
    10141 tagtaacctc ggcggctatt tcggcaggac acaccaaact agatatcgat agaaaaaacc
    10201 ttattaataa acaagtttta gctgctattg gacaaccttt tttaatcagt gtttataacg
    10261 agcttttagc caaatttaac aaactaggcg gacaaatttt acttacaggc aaggattttg
    10321 actctagaaa agctactaaa cacgcaaaaa atgctatcga tatgatgata aatttaggaa
    10381 ttttgcctat tatcaatgaa aatgacgcta cagctataga agaaattgtc tttggtgata
    10441 atgatagttt aagtgcttat gctacgcatt tttttgatgc ggatttgctt gtgattttaa
    10501 gcgatattga tggattttac gataaaaatc ctagtgaatt tagtgatgca aagcgtttag
    10561 aaaaaatcac tcatattaaa gaagaatggc tacaagcaac cataaaaaca ggtagtgagc
    10621 acggaacagg tggtatagta accaaactta aggcagctaa atttttactt gaacacaata
    10681 aaaaaatgtt tttagcaagt ggctttgatt taagtgtggc aaagacattt ttattagaag
    10741 ataaacaaat aggtggaact ttgtttgagt gattaattta ttaaattctc ttttaaaatc
    10801 aaataagcta taattaaaac ttttaatttc acacaaagcg aaaaaatgaa aaaaattatt
    10861 tttatgggca ctccatctta cgcaacttgt attttaaaag cactagtaga aaatgaaaat
    10921 tttaaactcg tagcactttt tactcagcct gataaagccg taggtagaaa gcaaatttta
    10981 actccaagtg atactaaggc ttttttaagt caaaattatc ctagtattcc tatttttact
    11041 ccaagttctt taaaagataa aaatattata agagagatta aggatttaaa tcctgatttt
    11101 atcgtggttg ctgcctatgg aaaaatttta cctaaagcca ttttggattt agcgccttgt
    11161 gtgaatttgc acgcttcttt acttccaaaa taccgtggtg ccagtccgat ccaaagtgcg
    11221 attttaaaca aagatgaaaa aagtggagtt tgcaccatgc tcatggaaga agggcttgac
    11281 acaggtgcta tacttgaaag cttagaatgt gatataaaag ataaaaattc aagtgaagtt
    11341 tttgaacttt tagcaaattt ggccgctaag atcatcctct ctactctttt aaatttcgat
    11401 aaaatcaccc ctaaaaaaca agaggaaagt ctagcaacac tttgtagaaa aatcaaaaaa
    11461 gaagatgggc ttataaattt gcaaaatgca agagaacttt atcaaaaata tctagctttc
    11521 accccttggc ctggagtttt cttggaaaat ggacttaaat tcttagaact tgaacttgtg
    11581 gatgaattaa aacaaaatgc taagatgggt gaaattttag aattagaaaa agaaagtttt
    11641 ttgcttgctt gcaaacaagg agttttgcgt attaaaaaac ttcaagaaag tggaaaaaaa
    11701 gctcttgatg gtaggactta tttaaatgga aaaaggctta aaagtgaaga tagtttgtgt
    11761 tgaaagtata gactcaactc atcttttttt atgcaagcaa atacgcaatg gaaagattga
    11821 tgaaaatttt gctatttatg ctttagaaca aataaatgga gttggaagta gggaaaattc
    11881 ttggcagagc tctaaaggaa atttacatct ttctttctgt attaaagaag aagacttgcc
    11941 aaaagattta cctttagctt ctgtgagtat ttattttgct tatttactta aagaagtttt
    12001 acaagaaaaa ggttctaaaa tttggcttaa atggcctaac gatctatatt tagatgataa
    12061 aaaagctgga ggggttataa gtgctaaaat ttcaaatttt atcataggcg gtatgggttt
    12121 aaatctgaaa tttgcacccc aaaatacagc tttatgcgat atagaaattt cgcttaaaga
    12181 tttagtgagt gagtttttgc aaaaagtaga aaaaaaaatt ttatggaaga atatttttag
    12241 caagtatatg ttagaattcg aaaaatcaag aaaatttagc gtccatcatg aaggtaaagt
    12301 tttttcactt gaaaattctt ttttgtatga agatggttca attttactag gcgataaaag
    12361 ggtgtatagt ttaagatgag cgaaattatt acaatagcaa atcaaaaagg tggagtagga
    12421 aagactacaa cagcagtaaa tttagccgct tctttggctg tggctgaaaa aaaagtactt
    12481 ttgattgatg ttgatccgca agctaatgcg actacaggac ttggttttaa tcgtaataat
    12541 tatgagtata atatttacca tgtttttata ggaagaaaaa agctttcaga tattatttta
    12601 aaaacagaat tgccacaact tcatttagct ccttcaaata taggtcttgt aggtatagaa
    12661 caagagcttg ctaaaggtga aaataatgag aaaaaaatgc tgcttaaaaa tcaaattcaa
    12721 gaagtgattg atgagtatga ttttattatt attgattctc cgcctgctct tggaagtatt
    12781 actataaatg cttttgcagc aagtgatagt gtaattatcc ctatacagtg tgaattttat
    12841 gcgctcgagg gtgtagctat ggttttaaat acaattaaaa ttatcaaaaa aactattaat
    12901 tctaaactca gggttcgtgg atttttaccg acaatgtata gctctcaaaa taatctttct
    12961 aaagatgttg tagatgattt gaaacaaaat tttaaaaaac aactttttac tattaatgga
    13021 aacgaagatg actttattgt gatccctcgc aatgtaaaac ttgcagaaag tccaagtttt
    13081 ggaaagccta taattcttta tgatattaaa tcaccaggtt ctgttgctta tcaaaatttg
    13141 gcgtattcta tattaggata attataatgg ggttaaataa agataggggt ttaagtagtt
    13201 taatcagtga tatggatact gtttatagta aagaattggg ttttgataaa aatcaaagca
    13261 ctatgataga aattgatcaa atttcaccca atccatttca gccaagaaag aattttgatc
    13321 aagaagcttt agatgaactt gctaattcta tcaaagaatt tggacttatt cagcctatta
    13381 ttgtatttaa aaaaaataat aaatttattt taattgctgg ggaacgtcgc ttaagagcag
    13441 tgaaagcatt aggaaaaaaa gaaattctag cttttattgc tgatattgat gagaataagc
    13501 ttagagaatt ggctcttatt gaaaatatac aaagagagaa tttaaaccct attgagcttg
    13561 ctaattctta taaggattta atgcaagttc ataaaattac tcaagagaat ttagcagaac
    13621 ttattcataa gtctcgtact caaataacaa atactttaag acttctgaat ttagatatta
    13681 gaactcaaga gttgattgct tctggaaaaa tttctcaggg tcatgctaaa gttttggttg
    13741 gtttagatca aaaagatgaa aaaatgttgg ttgatagcat aataggtcaa aaacttaatg
    13801 ttagagatac tgaaaaaata gttaaaaaaa taaaaaataa tgaaagctta cctaatcaag
    13861 aatttgaaga tgaaataaaa aaattaaaac aaatactaaa tcgctttgga tttgactgca
    13921 aaaataaaaa taatgatttt gtaattcatt tagaaaatat tgataaaatt aaaaaattaa
    13981 tcaaaatgct tgaaaagctt taaccaaaat cttagctttt ttatggtaaa atagtccttc
    14041 aaaaattcta accaaggaga attatgtttg aagatatgca tccttccata atgcttgcta
    14101 ctatggctat ttttttagct atgatagtta ttttaaatag tatgctgtat aagccgcttt
    14161 taaaatttat ggatgaaaga aatgattcta taaaaaatga tgagaataaa gtaaaagaaa
    14221 attctcaaga agttttaggt gtgaatgatg aattagaagc tattcatatt aacactagag
    14281 aagaaattca aaaaattaaa caaagtgcta tagctgctgc taaagaagag gcagagcaaa
    14341 ttcttagaag caagaaagaa gaattagaaa gaaaaatggc cagtttttat gcagatttag
    14401 ccgttcaaaa aaaagagttg caagaacatt taaacataca tttatctgag cttaagcaag
    14461 ctttgcaaaa taacataaag aaaatttaag aggagagaaa tgagtaagtt attctttatt
    14521 atatttttgc tacctttgta tgcttttggt gcatcaaacg gtagtggaga atatgatatt
    14581 attccaagga ctattaattt tctaattttt gtagctatat tgtattattt tgttgcaact
    14641 ccatttaaaa atttttacaa aaaccgtatt gtaaaaattt cttctaaact tgatgaaatt
    14701 caaaaaaaac ttttagaaag taaagctaag aaattagaca cgatgaaaaa acttgaagaa
    14761 gctaaggcaa gtgctgctgc cgctttaatt acagcaaaaa aagaagctga aattttagtt
    14821 caaaatatta agaaagagac tcaagatgag ttagatttac ttcaaaaaca ttttgaggaa
    14881 caaaaagatt atgaatttag aaaaatggaa aaagaattag tatcaaatac tttaaatgaa
    14941 attttttctg atccaaatat gacattaaaa cagagtgaaa taatagaact tatgatgaag
    15001 aaggtatctt aaatatggaa aatataattg caagaagata tgcaaaagcg atagcttcaa
    15061 gagctgatat aaatgatttt tatcagaatt tgtgtatttt aaattctgct tttgttttgc
    15121 caaaatttaa aaatattata gaatctaatg agattaaaaa agaaagaaaa atggaatttc
    15181 ttgattcttt ttttgatatt aaaaattcta gttttcaaaa ttttttaaga cttttgattg
    15241 aaaattcaag attagaatgc attcctcaaa tagttaaaga acttgaaaga caaaaagctt
    15301 ttaaagaaaa tatttttgtt ggtattgtat attctaaaga aaaattaagt caagaaaatc
    15361 ttaaagatct tgaagtcaaa cttaacaaaa aatttgatgc aaatattaaa ctaaataata
    15421 aaatcagtca agatgatagt gttaaaatag aattagaaga attaggttat gaactttctt
    15481 tttctatgaa agctcttcaa aataagctaa acgaatatat attgaaaatt atctaaggag
    15541 aaaaagtaaa tgaaatttaa agctgatgag atcagttcaa taatcaaaga aagaattgaa
    15601 aattttgatt taaatcttga aattgaagaa acaggaaaga ttatttctgt agctgatggt
    15661 gttgctaagg tatatggact taagaatatt atggctggag aaatggtaga atttgaaaat
    15721 ggtgataaag gaatggcctt aaaccttgaa gagtcgagtg taggtattgt tatacttgga
    15781 aaaggagaag gtttaaaaga aggtgcttct gtaaaaagac ttaagaaatt acttaaagtt
    15841 ccagtaggtg aggctttgat tggccgtgtt gtaaatgctt taggtgagcc aattgatgct
    15901 aaaggtgtga tcaatgctaa tgaatatcgt tttgttgaag aaaaagcaaa aggtattatg
    15961 gcgagaaaaa gtgttcatga gcctttacat acaggaatta aagctattga tgcgcttgtg
    16021 ccaattggtc gtggtcaaag agagcttatc ataggtgata gacaaacagg taaaactact
    16081 gttgctgttg atactattat atctcaaaga ggtcaaggag ttatctgtat atatgttgca
    16141 attggtcaaa agcaaagtac agtggcacaa gtggttaaaa gactagaaga acatggtgct
    16201 atggaatata ctattgttgt aaatgccggt gcttcagatc ctgcggcttt acagtactta
    16261 gctccatata ctggtgtaac catgggtgaa ttttttagag acaacgcaaa acatgcttta
    16321 attgtttatg atgatttgag caagcatgct gtagcttatc gcgaaatgtc tttgatttta
    16381 cgtcgtcctc caggtcgtga agcttatcca ggtgatgttt tttaccttca ttcaagattg
    16441 cttgaaagag caagcaagct aaatgatgaa ttaggtgctg gttctttgac ggcattgccg
    16501 ataattgaaa cacaagcagg agatgtttct gcttatattc caactaatgt tatttcaatt
    16561 acagatggac aaattttctt agaaactgat ttatttaact caggaattcg tcctgcaatt
    16621 aatgttggtt tatcagtatc tcgtgtaggt ggggctgctc aaattaaagc tacaaaacaa
    16681 gtttcaggca cattaagact tgaccttgct caatatagag agcttcaagc ttttgcacaa
    16741 tttgctagtg atttagatga ggcaagtaga aaacaacttg aacgtggaca aagaatggtt
    16801 gaacttttaa aacaaccacc ttattctccg cttagcgttg aaaaacaagt agttttaatt
    16861 tttgcaggaa ccaaaggttt cttagatgat attgctgttt ctagaattaa ggaatttgaa
    16921 gatggaattt atccttttat tgaggcaaaa catccagata tttttgagca aattcgctct
    16981 aaaaaagctt tagattctga tttggaagaa aaactagcta aagccattaa tgagtttaaa
    17041 gcaaatcatt tataaggtct tttatgtcta atttaaaaga aattaaaaga aaaattaaaa
    17101 gtgttcataa cactcaaaag actacaaatg ctatgaagct agtttctact gctaagttaa
    17161 aaaaagcaga agaagcagct aaaagatcaa aaatttatgc acaaaaaatc gatgaaattt
    17221 tgagtgaaat ttcatttcag atcaataaaa ttgttcacaa tgaagatgat gtgcgtttat
    17281 ctttgtttca taaaaaagaa caaattaaaa ccgtagattt aatatttatc actgcagata
    17341 aaggcttatg cggtggtttt aatattaaga ctttaaaaac agtaagtgaa atgctaaaag
    17401 aatatgaagc aaaaaatatt aatattcgtc ttagagctat aggtaaaact gggattgaat
    17461 attttaattt tcaaaaaata gaattgttag agaaatattt ccatcttagt tctagtcctg
    17521 attatgagaa agcatgtgaa gtaattcatg ctgctgtaga tgatttttta aatggaaata
    17581 cagatgaagt gattttagtt cataatggtt ataaaaatat gattacgcaa gaacttaaaa
    17641 ttaatcatct tattccagtt gagccaaaga gtattgaaca gactcataat tctcttttag
    17701 agcttgaacc ggaaggaact gagcttttaa aagatttaat gaaaacgtat tttgagtata
    17761 atatgtatta tgcgttaatc gattctttgg cggcagagca tagcgcaaga atgcaagcta
    17821 tggataatgc aactaataac gcaaaggcaa gagtgaaaca actaaattta gcttataaca
    17881 aagcaagaca agaatccatt actactgagc ttatagagat tatcagtggt gttgaatcaa
    17941 tgaaatagta aaattttaag gagaagataa ataatgcaag gatttatttc acaggtatta
    18001 ggtccggttg ttgatgtaga ttttaacgac tatttgcctc aaattaatga agcaattgtt
    18061 gtaaattttg aaagcgaagg aaaaaaacat aaacttgttt tagaagtagc agctcattta
    18121 ggagataata gagttagaac tattgctatg gatatgacag atggtttggt aaggggctta
    18181 aaagctgagg ctttaggtgc tcccattagt gttcctgttg gtgagaaagt tttaggaaga
    18241 attttcaatg ttactggaga tttgatcgat gaaggtgaag aaatttcttt cgataaaaaa
    18301 tgggcaattc atagagatcc accagctttt gaagatcaaa gcacaaaaag tgagattttt
    18361 gaaacaggga ttaaagttgt agatttactt gctccttatg caaaaggtgg taaagtaggt
    18421 ctttttggtg gtgcaggtgt tggtaaaact gttattatta tggagcttat tcacaatgtt
    18481 gcatttaagc atagcggcta ttctgtattt gcaggtgtgg gtgagagaac tcgtgaagga
    18541 aatgaccttt ataatgaaat gaaagaaagt aatgttttag acaaagttgc tctatgttat
    18601 ggacaaatga atgaaccacc aggggcaaga aatcgtattg ctttaacagg tttaacaatg
    18661 gctgagtatt ttagagatga aatgggtctt gatgtgctta tgtttattga taatatcttt
    18721 agattttcac aatcaggttc tgaaatgtca gcacttttag gaagaattcc atcagctgtg
    18781 ggttatcaac caaccttagc aagtgaaatg ggtaaattcc aagaaagaat tacttcaact
    18841 aaaaaaggct caatcacttc agttcaagct gtttacgttc cagctgatga cttaacagac
    18901 ccagctccag caactgtttt tgctcactta gatgctacaa cggttttaaa tagagctatt
    18961 gctgaaaagg gtatttatcc tgcagttgac ccacttgact caacttcaag aatgcttgac
    19021 ccaaatatca ttggagaaga acattataaa gttgctcgtg gtgttcaatc agtgcttcaa
    19081 aaatacaaag atttacaaga tatcatcgcc attttaggta tggatgagct tagcgaagag
    19141 gataaacttg tagttgaaag agcaagaaag attgaaaaat tcttatcaca accatttttc
    19201 gttgcagaag ttttcacagg tagcccagga aaatatataa gccttgaaga tacaatagca
    19261 ggatttaagg gaattttaga aggtaaatat gatcatttac cagaaaatgc tttctatatg
    19321 gttggaaata tagatgaagc tattgcaaaa gcggataaat taaaaggtta atttatgaac
    19381 gatttgatta atttcgagat agttacgcct ttgggtgtaa tctatcaagg agaagtaaaa
    19441 tctgttactt taccgggtag tgaaggagaa tttggcgtgc ttaaaggaca tgctgctttg
    19501 gtttcttctt taaaatctgg agtaattgat attgaaaaag ctgatttaaa ccatgaatta
    19561 attgctattg atgctggaca tgcaaaggta gatgaagata agatttgcgt gttagcaaag
    19621 ggtgcggttt gggtttgtgg aagtgatgaa agtgagattg aaaaaaatct tgctcaagca
    19681 aaagatttga ttaaatctat gagttctgat aatgcagctt tagcagcaac tttttcaaaa
    19741 cttgataatg caaggatgca ttaatgaatt ttgaagctat atttcatttt ttcaatagtt
    19801 caagtattat tacttatata gttttattat ggctttcttt atattttatt ttagcattta
    19861 gtattttgtt tgctagattg acttatttgg ctacatggag aaataaagaa aaagaaagtt
    19921 tagaaacttt gctcttgggt gagaaggatt taagtcgtac tgattcgatt ttaagaaaat
    19981 gtaatgatac aacttcaaat catttagaaa tctataaaaa tttagcaagt cgccgcgctt
    20041 ctgctggact tacttggctt agtattattg cttcaacttc accttttata ggtctttttg
    20101 ggacagttat ttctatactt gaaacttttg gtgggcttgg aactcaaaat tctttaagta
    20161 tcatagctcc taaaatcagc gaggctttag ttgctacagg ttgtggtatt ttagtagcaa
    20221 ttcctgctta tacatttcat ctcatcatta aaagaaaagc ttttgaactt ttaagcatta
    20281 ttgatagcga gattaaagtt ataagttcga gtaaataagg ttaaaaatgc catttgatga
    20341 tgaaaaacct gaacttaata tcacaccttt agtagatatt atgcttgtat tgcttgcgat
    20401 tttaatggta acagctccaa gcattactta tgaagaaaaa attaatcttc cacaaggtag
    20461 tcaaaaaaat accagcactc caactgttaa gagtttaatt attagtatta atgcaaaaaa
    20521 agaaattttt ttaaatcaag aaaaatacga ttttataagt tttgctgaca atcttgctca
    20581 aagaaaagca caatttaata ccgaagatcc ggtttttata cgcgctgata aaagcttaaa
    20641 atatgacgat gttatttcag tcttaagaag tgtaaaaaat ttaggattta ataaagttgc
    20701 tttacagact gaataatcat gaaaaattat ggtttgagta atttaaattc gtttttactt
    20761 gctttagcaa tatatattag tatagtaatt cttgtttttt ttagacttgt aagcgaggtt
    20821 gaacctgcta tacaatatac tgatataaaa gatagttttg tagatattga acttgctgaa
    20881 ccatcaaaac aagttattac tcaaagcaac actcctaaag aaatacaaaa accaacagag
    20941 caaattgata tagaaaagct ttttgctcag actacaaata aaacagttaa aactgaagat
    21001 attgaccaaa aggcaagtaa ttttaatgag ctttttggaa atattaaaga aatacaagaa
    21061 gaaaagacta caaaaattca atcaagtgct aaatcaggaa tttctagtgc cccaaaacct
    21121 caagcttctg aacttgtaaa acaacttaat gatagtttac ttcaagaaga aagttcaacg
    21181 caaggcgaaa gcacaaaggc gcaaaagatt ggaatttatg atgaattttt agggaaagtt
    21241 gtgcgtatta tcactcaaag atggactcag tattatccaa atagtgaaaa aatttctgtt
    21301 aaggtaaaaa tttttattga tgaaaatgga aaatttggct atacttcagt tgaaaaaagt
    21361 gggaatcctt tatatgatgc taaagtggct gaatttttag aaagtcaaaa aggtaaattt
    21421 attacttatc ctccgcaaaa taaaaatata agcattacca tgaatttaag agatgaagta
    21481 aaagttaaaa atgattagga gaaaaaaatg aaaaaaattg tagcaatttt tttagtcttt
    21541 ttaggaagtc tttgggcaga agatccagtg attgatgttg ttaattctgg tgtagtttta
    21601 ccaaagatta ttgttaaaga caattcaaat ttaagtgatg agaatttaaa gaaaagcttt
    21661 tataatatca ttgtgaacga tttgaaagta agttcaaact ttgaagttgt tgctaatgca
    21721 actgagacaa gtaattatat ttttgaatac actttaaata aaaatggtaa cactttgagt
    21781 ttaaatgtaa aaataaaagc tggcggttct gataagtcag agcaaactta tactttaaat
    21841 ggtttagagc aatatccatt tttggcacat aaaagtgtca aagcttctgt aaatgcgtta
    21901 ggacttgcac ctgttgattg gatggatcat aaaattttga tcgcgagaaa ttctagctct
    21961 aaaaaaagtc aaattattat ggctgattat actttaactt atcaaaaagt tattgttgat
    22021 ggtggactta atttatttcc aaaatgggga aataaagaac aaactctatt ttattataca
    22081 gcttatgatc atgataagcc aactttatac cgttatgatt taaataccaa taaagctagt
    22141 aaaattttat caagtggcgg tatggttgta gcaagtgatg tgaatgtaga tggaagtaaa
    22201 ctacttgtta ccatggctcc aaaagatcag cctgatgttt atttatatga cttaaatacc
    22261 aaaaatctaa cacaattaac taattattct ggtattgatg ttaatggaaa ttttattggc
    22321 tcagatgata gtaaagtggt atttgtaagc gatcgtttag gatatcctaa tatttttatg
    22381 caagatttaa atagcaatag tgctgaacaa gttgtttttc atggtagaaa caattcggct
    22441 gtttcgactt ataaagattt tttggtttat tcaagtcgtg aaccaaatca agcaggtgtt
    22501 tttaatattt atttgatgtc aattaatagt gattatattc gtcaacttac agcaaatgga
    22561 aaaaatttat ttccaagatt ttctagtgat ggtggaagta tagtatttat caaatattta
    22621 ggtgcgcaaa gtgctttggg tgttattcgt gtaaatgcaa ataagacttt ttattttcct
    22681 cttagggttg gaaaaattca atcaattgat tggtaaaaat ttcaatttta ggttaaaatt
    22741 aattaaaaat tagatataat aataagaatt tattaacttt gaaaggtcat aaatgaaaaa
    22801 aattcttttt acttcaatcg cagctcttgc agttgttatt agtggttgta gcacaaaaag
    22861 cactagcgta agcggtgata gtagtgttga ttcaaatcgt ggttcaggtg gaagtgatgg
    22921 ttgggatatt gattcaaaaa tttctcaact taatgatact ttaaataaag tatattttga
    22981 ttttgataaa ttcaacattc gtcctgatat gcaaaatgtt gtaagcacaa atgctaatat
    23041 ttttaacact gaagtaagcg gtgtaagtat tactgttgaa ggaaactgcg atgagtgggg
    23101 aaccgatgaa tataaccaag ctctaggttt aaaaagagca aaagctgtaa aagaagcttt
    23161 aatcgctaaa ggtgtaaatg ctgatagaat tgctgttaaa agctatggag aaacaaatcc
    23221 tgtgtgcact gaaaaaacta aagcttgcga tgcgcaaaat agacgtgctg aatttaaatt
    23281 atcaagataa ttaatgaaaa aaatattcac agtagctctt cttggagcta ctttacttta
    23341 tgcagaaagc tcagcttttg gtgcaggaga tataacaagc aattcttctt atggtttaac
    23401 ttcaaatgaa aaattattta aagaaaagtt agataattta aataatgaaa atatacaaac
    23461 aaatgctaga attaatgaaa ttaacgaaag aatcgagggt ttacaaagca ctttagaagg
    23521 tataaattct caatatgcca aatcaaattc tagattaagt caagttgaag agaataatca
    23581 aaatattgaa aataatttta ctagtgaaat tcaaaaatta aaggcttatg ttgaagaaag
    23641 tagaaaaatt caagaagcta ataataagca agtaaaaaaa gttttagccg aacttagttc
    23701 tttagtagat gctattaatg caaattatgt ttctaaaaac gaattaaatg atgcaaattt
    23761 aagcgttaaa actattacac ctagtgttgt tgtttcaact acagattcaa atagtaccat
    23821 tgaaaacaat aatactcaaa atacccaaga tgataaagca aaacaaattg atgaatcttg
    23881 gaaaaagaaa aaaaataatg aaattttaga attagcgata aaagatgttg ataaaaatgc
    23941 ttttgaagat tccaaagcaa aattaaattt tctcataaca aagcagtata aacctgcaag
    24001 agcaaatttt tggttagggg agatcgagta taaacaaaaa aattataaca atgctattgt
    24061 ttattataaa aaaagttctt ctttgagtac aaaaggagat tatttcccaa aacttttata
    24121 tcatactgcc atttcattgg ataaaacagg tgatacaaaa acagcaaatg gtttttataa
    24181 agctttaaaa actaattatc caaattcacc cgaagcaaaa gcttcaccta atagaaaata
    24241 aattaaggag ataaaatggc tatagaaaaa aatagtgtag tttcaatgtt ttatgagtta
    24301 aaagatgcaa atacaaatga agttttagaa tcaaatttat attctcaacc tatttctttt
    24361 attttaggca aaggtcagat tttagaaagc ttagaagaag aagtgatgaa gcttgattgc
    24421 cctagcaatg ctgatgtggt aattaaaaaa gaaaaaggtt taggcgaata cgatgaaaat
    24481 gccgttcaaa ctttaccaaa agagcaattt gcaggtattg atttaaaagt aggtatggag
    24541 ctttttggcg aaggtgaaaa tggcgaaacc gttcgtgtaa ctgtaaaaga aattggtgaa
    24601 aatgatgtga caattgatta taatcatcct tatgcaggtc gtgatttgct tttttcttta
    24661 aatatcgtag atgctagagc tgcgagtgaa gatgaaattc ttacaggtat tatcgcagga
    24721 agtcatagtt gtggttgtgg aagcggacat ggacacgatc atcatcacgg acatggacat
    24781 ggtggcggcg gttgctgtgg tggcggcggt tgcggttgtc attaatgaat gctgcgttta
    24841 tatttccagg tcaaggctct caaagtcttg gcatgggaaa agatttttat gaaaactcta
    24901 taaaagccaa agaactcctt caaaacgcaa gtgatttttg taagattgat tttaaacatt
    24961 tgctttttga agaaaacgaa aaactcaatc aaagtgaatt tactcaaccc gccatcgttt
    25021 taaattcctt aatggcttat agtgttttac ttgaaaaaaa acctgattta agttcgaaat
    25081 ttgctttagg gcattctttg ggagaatttt cagtcttagc tgtcaatggt gcttttgatt
    25141 ttttagaggc tctttctttg gtcaataaaa gagggctttt catgcaagaa gattgtgcaa
    25201 aagttgaagc aggtatgatg gtggttttgg ggcttgatga tgaaaaggtt gaagagcttt
    25261 gtcaaaaagc acaaaaagaa aacaagcaaa ttttcgctgc aaattataac tgcgatggac
    25321 aaatcgttgt agcaggttta aaacctgatt tagcaagtta tgaaagtgta tttaaagaag
    25381 caggagctaa aagagctatg cttttaaata tgagcgtggc aagtcattgt cctcttttgg
    25441 aaaatgcttc agctaagctt tgtgtggagc ttgaaaaggt gttaaaacca aattttaaag
    25501 ccgtaatttc taatgcaaat gccaaaattt atacaagcaa agaagaagcc cttgagcttt
    25561 taaaagcaca acttatctct cctgtgcttt ataaacaaag cattaaggca tgtgaaaatg
    25621 aagtagatta tttcatagaa tttggcgcaa gtgtgcttaa gggtttgaat aaaaaaatca
    25681 cttcaaaaga aacttatgct ttaacaaata tgaatgatat tgatgaattt ttaaaggttg
    25741 tatgatgaaa atagcaattt taggagccat gagtgaagaa atcactcctt tgcttgaaac
    25801 acttaaagat tatacgaaaa tagaacacgc taacaatact tattattttg caaagtataa
    25861 aaaccatgaa cttgttttag cgtattctaa aattggcaag gtaaattcta ctcttagtgc
    25921 tagtgtgatg atagaaaaat ttggcgcaca agctttgctt tttacaggag ttgcaggtgc
    25981 ttttaatcct gaacttgaaa ttggcgattt gctttatgca acaaaattag ctcaatacga
    26041 tcttgatatt actgcttttg gacatccttt gggttttgtt ccaggtaatg aaatttttat
    26101 caaaaccgat gagaaattaa acaatcttgc tttagaagtt gctaaggaat taaatatcaa
    26161 acttcgtgca ggcattattg caacgggtga tgagtttatt tgcgatgaag caaaaaaagc
    26221 aaaaattaga gaaattttca atgcggatgc ttgtgaaatg gaaggcgcaa gtgtggcttt
    26281 ggtttgtgat gctttaaagg tgccttgttt tatcttaaga gctatgagtg ataaagcagg
    26341 ggaaaaggct gaatttgatt ttgatgagtt tgtgatcaat tcagctaaaa tttcagccaa
    26401 ttttgtgctt aaaatgtgcg agaaattatg ataaatctta gcaaaaaact catacgccaa
    26461 gttgcacaag ctaatgctaa atttggactt attaaagatg gagatagggt tcttttaggg
    26521 cttagtggcg ggaaagattc tttggcttta gcccatcttt taaatcgtat gcaagctcac
    26581 gctcctttta aatttgaact tgaagcggta actttgagtt atggtatggg cgaggattat
    26641 tctcatcttc atgcacattg tgaagaacac ggcattaaac atagcgtgct tgattcaaat
    26701 atttatgaag tttcaggcga taccataaga gaaaattcaa gtttttgtag ttatttttcg
    26761 agaatgcgtc gtggagcttt atatacttac gctcttgaaa aaggttttaa caagcttgct
    26821 atagctcatc atttagatga tgcagcagaa agctttttta tgaattttat tcataatgga
    26881 gctttaagaa ccttagcacc tatttatcaa agcaaacgcg gtataactgt gatacgccct
    26941 ttgatttttg tgcgtgaaag acagcttaga gataatgcta cgcaaaatga acttagcgtg
    27001 ataggaaatg aattttgtcc tggtatgaaa ctcagtgaaa aaaatgtaaa atttccacac
    27061 gctagagaag aagctaaaca gcttttagca aatttagaaa aagatcatcc taagcttttt
    27121 acaagtttaa aaaccgcttt tgccaattta cacacggaga gtttttggct tcaaaaggca
    27181 taaaagcatg aaaaaagctt ttgttttagt ggattatcaa aatgatttta ttgatggaag
    27241 tttaggtttt gataaggctt taaaaatcaa agaaaatatt cttaaagcct taaatcaaat
    27301 cgattttaat aacacgcatt tgcttttaac ctatgatacg catgatgagc attatctaca
    27361 aagtaaagaa ggtttaaatt tacctgtaaa acattgcatt aaagagagtt tgggttggca
    27421 aatgccaaag gaatttgaac cttttttaca aaaagctcat aaaatttttt ataaaaatac
    27481 ttttggtagc ttagaattag ctaatttcat acaaaaaagt gattatgaag aacttcattt
    27541 tgcagggctt gtttctcata tttgtgtgtt ttgtaatatc attttagctt ttggtgctaa
    27601 gcctaatgca aggataattt tacaccaaaa tttaagtgca agttttgatg aaaatttaga
    27661 aaaatccgct tttgatatac ttagggctta tggtattgaa attgtttaat gcaaggcttt
    27721 atacttcata ctcaaaaagt taaagatgag gatttgatcg tttatatttt aagtcctaaa
    27781 atgcttatta aggcttatcg tttttatgga cttagacatt ctagtatttt aagcggctat
    27841 aaaatcgact ttgctttaga agaaaatcct agttttttac caagacttaa agatgtattg
    27901 catttgggat ttttatggat tatgcaaagg gataaaatgc ttatttggca agaatttatc
    27961 cgtcttttat ataggcattt aaaagatgtg gaagagcttg atagttttta ttttgattta
    28021 cttgatgagt gtgtgaaaag gtttgaaaaa caaaatccaa agcgtgttat tgttgatgct
    28081 tatttaaaaa ttttggaatt tgaaggaaga ttgcataaag attttttttg ttttgcctgt
    28141 gatgagaaaa ttcaaaattc cattacattg ctaagggctt ttttaccttc gcattctcaa
    28201 tgtgctttag gatttgagtt tgaagagaaa aaactaaaac aattttatag tagtaaaaat
    28261 tgtgcgattt ttgatgatga agaaatagaa aatttatatc atttgattaa ggaaggttta
    28321 tgatattaag tgatgaaaaa tgtgattttt tagaatctat agcaagtttt ttaagtccta
    28381 aagatgtgga gcttgtcttt gtggatagta aagaaatgca agaaattaac ttagagcaaa
    28441 gaaaacaaga taaaaccact gatgtacttt cttttccact tgaaaatatc gatgagagtt
    28501 tgcctttggg ttctgttgtg atcaatgtgg atttggcaaa agaaaaggct aaagagttag
    28561 ggcatagcta tgaagaagaa ataagcttgc tttttatcca cgctatgctt catttgttag
    28621 gttttgatca tgaaaatgat aatggagaaa tgagagaaaa agagaaagaa cttatagagc
    28681 attttaattt acctaaaagt ttgattgtaa ggactttgga agattaagta agattttttt
    28741 caagggctag aagacttgcg ctttatattt taaatatatg agtaaaaata ttaaaaaaaa
    28801 tcatttttgc cgatttactt tagaataaaa tttattccaa ggtgataaag atgatagtat
    28861 ttcctctaag ctcttttaat agatattttg gaaacaatcc tttgcaaaca cttaccaaaa
    28921 taagagatga aagtattgaa aatggaaatc ccgagcttac aaaaaaacaa agagaagaat
    28981 taggtaatga tttgatagat ttgtataaga tttctaaaaa attcagcgat aaaatagaat
    29041 tagtcgaggg ttcaatagaa gataagctta gaaacaatga attaccagaa tcagaagtta
    29101 aaaatttatt tcaatggatg gatgaaaatg ctaaacaccc tcgttggatg catattgatg
    29161 gcgtgagtta tgatgaagct tatgttaaaa tttttcacac aagcaaaagt atagatgaat
    29221 ttaaagaaaa atatcttgag cttcaaaaaa aatattttgt tgattttaac aatattgatt
    29281 catcgcagaa aaaactgtaa ggggtatttt aaaaagaaca tgtaactatc cctaaataat
    29341 tttagcaaaa atcccaaata ataggatttt aaagcttaca aaaataactt tttatctttc
    29401 ctaatctaaa gcgtaaaata tcccaaatat cccaaaatgt ccgctttgtc ccaaaaaagt
    29461 gattaaatgc tgtttaaaag atggataaac acgagctttg attttaaatt ttatatccca
    29521 aaagtgtttt ttaccctcta ggatagttac atttttactt aaagtatttt tatattttct
    29581 tattgatgta actatcccca taaaacacta tataatcata gtttaaccac tttttatata
    29641 aaaatagcat gtaactatct atggcattaa gctttggaag atagttacat agaaaactta
    29701 aaaagtaatg aagcaatttt ttatgaaatc ttgttaaaaa aatagcttag taagatgttt
    29761 ttaaatatca atttagagag cttgaagtta gatttttcaa gctcttatat taaaaatctt
    29821 tcaaatcaaa agtttttaat tgctttttga aattttatgt ttaaattctt tgaagttaaa
    29881 atcaaaggat ttaaaatgca aatgcaagaa gtgattgaaa agttaaagga tatacttgcg
    29941 agtgaaggca aaagagattt aaaaacaaaa gatatagcta aagaattagg tatccaccca
    30001 gatactttta attctatgaa atttagaaac tccattccat atccacaaat cctaaacttt
    30061 ttaaatgaga ggaatataag cattaattat ttcttctatg gaagttcccc aaaagatcaa
    30121 ttagaatgtg agaataaata taaaatttta aagctttata aaacaaatgc gagtttgggt
    30181 ggtggcggaa taaatgattt aatagattgc tctgagctta ttatggatga aaaactatta
    30241 aacttttttg gtagtaaaga atgtgagttt atcacttgct atggagaaag catggagcca
    30301 cttataaaag atggaagtat ttgtgtaata gatagaaata aaacttttaa gaataaaagc
    30361 atttgtgtga ttaatactag agatggactt tttataaaac aagttttaaa acaagatgat
    30421 ggagtgattt tacactcttt aaatccttta tatgaagata tattttataa aaatggagat
    30481 tttttgctaa ttggtgtggt aattggagaa ctttcaagac tatgacagca cacaataagc
    30541 taagccaagc taatctcaca gagagtgtaa aacacaaggt tgttctatca aaaaaggaga
    30601 taaacatgaa agatatcaaa aattacaccg ataaagaatt aaaagaaaaa atcatacaag
    30661 atttagagag tgaatttagg attttgtaca aaaagctttt aaaagaaaaa gattatcttg
    30721 ctagggataa tatattagag cttatgacta tttataatat gggcataaac tcttattcaa
    30781 tcgctaaaag atttgagatg aatgaagata aaagtcttat acaagttcct ttgtttgaaa
    30841 gatatattat aggtagaaaa tttgtagtta aatataatga tgaaaaacaa agatacgaat
    30901 taaaaagtac cttttgtgaa ttttaaggag aaaagatgaa atatcctaat gtttatgtga
    30961 aattagttgg cgaagatggc aatgctttta gtattctagc aagagtaagc aaggctttaa
    31021 aaaaagcagg tgtaagcaaa gaagaaataa gtaaatttca aaaagaagcc atgagtagtg
    31081 attataatca tttattaaat gtggtgcaag attgggttaa tacaaattga tttcaaaaag
    31141 atgtcaaaca acagcacaca ttcagccaag caaagctaat cttgtcttat caaaacaaaa
    31201 ggagataaga tgagtaaagt aatagtagat atcaaaaaag gttttagcaa gacttttata
    31261 aacgcaattt gcaaccataa caatgaactt gttttagaat atcttaaaaa tggtatgagt
    31321 gcaactaaag aatgcatggg cgaagaacct atgttttatg caataactca taataatttt
    31381 ggagcgattt tacttttatt aaaatacggt gctattttag ataaagagta tctagaagaa
    31441 agcaataaag attttagcaa agaagctcta aagtttttaa gctctttcct aaaataaaag
    31501 agagtatttt tactctctta gcttttaaaa attcataatc aaaagctctt tactttcttt
    31561 tctttttaaa acattattat ttaaagaata ccttactttt aattccttaa tattaaaatc
    31621 tttataaagc tctcttataa gctcacaatc attataagaa agcataaatt tacccttgat
    31681 atttttaagc aaattacata aaagttcatg ttcttttagc ccaaaacctc ctgtgttttt
    31741 ataataattc tcagtcccta cataaggtgg atctaaataa aataaagctt cattgtaatc
    31801 atattctttt aaaatatatt caaagctttt attttcaata ctggcatttt taagtctttt
    31861 tgtatgtaag ctaaaatccc tacataatct ctttggtgct ctttgtttac tcatagcaaa
    31921 ttgtcccata cttgatccaa aagaagtact gataagataa aaataaaaag cagccctttc
    31981 taagtcattt cttggcttaa tttctttatt tttaagcata tgaaagattt ttctacttat
    32041 tatcatagaa ttaagcacat ttgttaggct ttggggttta tttcttatac aaagatgtaa
    32101 attaataagc tcgtcgttaa tgtcgttaat gacttctatt tttgaagcac ttttttgata
    32161 aaaaacactt aaagctccac caaaaacttc aatatagctt ttatgctcag gcattaaagc
    32221 gatgatttct ttagctaaat agtttttacc acccacccaa gcaaacggag cttttagtgt
    32281 agttcttgta ggtttaataa gtgtgctagt ttttagaaat ttgtctgtat tatttttcat
    32341 acaaactcct ttcaaaataa aatttaaaaa gctagtcttt aaaaataaag ctataatgct
    32401 tttgctagtt tttagaaaaa ggaaggcttt agtcttcctt gccattcttg ctaacacttt
    32461 ttgaaaaatt gcgattttcc aaaaagtcgc atcactaaag gccacgcccg accattcctt
    32521 gctatgcaat gccccatatt gtcacttctt aacaattttt tcaataaaat ccttagtatc
    32581 tttataaatc acacttctta tacttgggtg caagactttg ttattatcta tgggtaaaaa
    32641 agctctttga ggaatttttc tttttctgtt tccccattga tgaacataac catatttaaa
    32701 gccattttca gtctgtatat tattaaagac ttttacgcca cttttagtag gttcgctttg
    32761 ccaatttaaa gcattgctta attctccatc tctttttaaa attcctttat tcttaccatc
    32821 ttttatcttt tgttttatgg tagctggttt taagcttttc cattttccat taaaaatact
    32881 gcgttcgttt ttaaaagagt ctataatgct atttcttata ctctctccag cacccgccat
    32941 aatgctttgc ccgtgtttat ccatatctat taatttatca caagctttaa aaaagttttc
    33001 aagccctttt atttctatat attcactcat attttatcca taaattgtag tgttaatttt
    33061 gttttgttct tgctttctta aagcgtcgaa tacacttttt tgtatagcat ttgcaaattc
    33121 ttgcatatta aaattgccat ctttagtcgc tatgttaaaa gtgccattaa cacttatatt
    33181 gatattgcca ttattaaagc ttggagtatg atttatactt tttgtcttag ctaattcatc
    33241 tttataagtg tttgtagtaa agactttttc tttgttttgt tcactttggc ttatcttaac
    33301 ttcttcatca tctccaagcc ctacaaaatc aagagcatct tttataaagc cacttataga
    33361 tgagatcata tctcctaccc aagaaagctt agaagcaaac caatcaaata aagaaccaaa
    33421 aatactataa aagaaatcgc caacaccttg ccaaatagaa tttaaaaact cagctaatgg
    33481 agaagcaaca ctcataataa tatctttaaa acttgtaaat acaagggcac atttatcaaa
    33541 tactgcttta atgacattgt atataggctc ccaaacaggt ttaagccatt ctataaaaga
    33601 tttaaaccaa gacttaacct tatcccaatt tgcaataata agcccagcca ctattgcaat
    33661 gccccctaaa ataagaccaa tgggattact catcatagcc atgcttaaca ctctaatacc
    33721 aatagctacg gctttaaaaa ctttattaag cccacctaca acaaaagata aggctttaag
    33781 ggaggttgtg taaatagtag ttgtgacggt ttttgctttt aaagtaatat tagataatat
    33841 acaagaatta cgaaaagcta aaagatgtat tcttgtttta atcaaagcac ttttaagtaa
    33901 aatggtgcaa tctttaagat agtttttagc aatagcataa gccaagactg caggtttggc
    33961 gagcaaaaaa gtggctataa gtcctcctaa aaccccatta agaccaggga caagtcctgt
    34021 aatataagtg atactattaa caagataaga aattccagca ctcacccatg atattgcagg
    34081 taaaaaaacc gaacctaaat taacagctaa ggaattaaaa gcatttttca ttaatataat
    34141 agaattttca gtggtagcag cccttgtatc aaattccctt tgtaaagagc ctttttttgc
    34201 ttcatcacca gcatttttta aagcttcttt ataagtgtca agccctccaa caagagttgc
    34261 catatcatct gcaaattcac gaccaaaaat atcaactaaa acgcccattt gttctttttg
    34321 gtctagtttt gaaattcttt gtaaaaacat atctaaagct ttttgaggat catcaaaact
    34381 ggcttgtttt aaaaatgctc cacttatacc aagctttgca aaagcagatt cagttttagt
    34441 tcccatatta tcagctgtgg ctaaaacgcg gtaaagacta ttaatagctg ttcctgctac
    34501 ttcaggtccc ttacctaaag atataaaaga agagcttaaa gccgcaattt gttctttagt
    34561 aaatcctatt tgctttccag cagctgcagt tcttttcata acatcaataa tctctctagc
    34621 cttagatgca ctattatctg aaagattatt aatactatcg cctaaatcct ccatgtcttt
    34681 taaagaaatg cctaaaatat ttttaatttt cgcaacacta tctcccacat cttcagcgct
    34741 catatcaaat gccactttca ttttagttac aagatttgta aattctctta catcttttga
    34801 accaagtcca atctgtcctc cagcagcagc tatagctgct aactcattgg cagtaacagg
    34861 taaagtttga gacatcttaa ggatatcagc actcattttt ttaatatcat cgccttcatc
    34921 aaaattcaca acctttctca catcagccat agcagattca aagctgatag cttctcctaa
    34981 acccttacca ataattccac ctcgaataac attacctaaa cttaaaaact catcttgcaa
    35041 accttttctt tgagctttta attccgctct taaattggca ttgagtttaa gagtgtttaa
    35101 ttctttttgc aatccactaa tgccgagttt agtttttgct gctatttttt ctaaattgct
    35161 aaaatcttta actaccttgc caaccgcact tgcgttttta atcgctagtc ctaaaataac
    35221 accaattcca atacttccag cattttccat attcaaccct ttttaagcga ttgtatttta
    35281 aaatctttac tatgaaagtt ttaaaattta ttaacgatga tataatttca catattgcct
    35341 tattattaac aacgctcata cctgcttttt acataagcta tcaaagtgca agtgatggtt
    35401 tttttaatac aatggctatt tttatttttt cttattttgc aagcattatc ataactgcta
    35461 ttttagtgat gattatgcca cccattgctt tattgcttat tttacccact tggctaattg
    35521 taataagttt agattttatt ctttttgcta ttttaaaaat ttattttttg aaaaataaaa
    35581 caatcaaaaa ctcttagcct ttaaaaattc ttttgaaatt tccaaagctt cttcaaactc
    35641 atctaagctt aaatctaaaa cttcatttaa tccccaatgc aaagtatgac ttataagagc
    35701 tatagcctct aagctataac tcctgcttct accaaaaaat ctttaagagc gtcctgtaaa
    35761 gctttaaaat ctttaagatt caaatcttca atttcacttt cttgcttatt ggtaagtgca
    35821 gctatcatac aaatagtttg ctccatttct ttttcacctt tattagtggc gttttttagc
    35881 acacgcacat ttggctctct catttttaat tcttcgccat tttcaagttt gattattttt
    35941 tctttcattt ttctttcctt tttatccttc tttatggcgg aagtaattcc gcctaagaag
    36001 caactaaagg cttccccacc cattgctacg caatgcccaa gaagccaaac tttaatccta
    36061 aaatcccagt attgttaatt aaactccgat taatcagtgt ttaaagggtt aaattgcttc
    36121 ttacatcact catcatatcc accccattta tcattaaaat agtgttttta tgatcgtagg
    36181 taatgattgg aatgttattg cggcgttgca tgtaaaaatg aactgccatt ttaatttcag
    36241 cttccacctc ttttccactt tcatgatcac tttcacttat gcttataaac tctcctaaaa
    36301 actcagtact aataccatag ttttttccac ctttgtgaac actttctcta aaaagcaaag
    36361 gagctttaat ctcgctaaaa gtagtatgaa agaaagccgc ataaagcact ggatcaacaa
    36421 cggctaattt aaagctaatt tctaaaggct ttaaaacccc gctactataa tttgctccta
    36481 aaactccttt ggtttcaatc atctcttgtt ctatatcagg caattttaaa tttctaacca
    36541 ctccaagata accttgacca tctatataaa tattaccttc ctgtataact tcgccaatta
    36601 ttcttttcat ttttattttc tccttgtaaa aatttattaa ctatccgcac taatagtttt
    36661 aatcaaatca ctcgcccatt tatcagagta gatgaactct aaagtgattt gtttaacgat
    36721 tggattattc atcattttta tatttagata aaacttacca gcactcacat tggcatctgt
    36781 gtttctttct tcatcccagc ttacctcata gccaattaaa accttagctc cttttaaatc
    36841 tcttagcaat tcttcaatgc tgatttttat aaaatataat tcacttgctt ttttatcaat
    36901 agccttaaaa gctgcttttt gtcctgctag ggctatacga tcaaaagttc ttacacgagc
    36961 taaatcttgc caaatcgtat cttcatggct agtttcccca ccccaagagc gataaccttc
    37021 acctaaaata caagttgaaa tatgagcatt tcttaatctt tctgcatcac aatcaaagcc
    37081 attgataaac tctataaaat gctctgtgcc agtaacccca ttcatcactc tatttgagta
    37141 agaatcactg aaaccatatt ctttatcccc atctgtatgg gctattaaac ctgcgatgat
    37201 aggagattgt ggaacataag cgtattttcc ttgtgtgttt aagatttgaa cctgtggcca
    37261 agtggcaatt aatcttttag agctaaaagc ctccattgta ttaatagctt cgccaacatt
    37321 tgtagcgtaa agatccacaa tagctgtgat attcatagaa cttgccacac tttcaagctt
    37381 agcctttact cctgcttcat gtgagtaata aggagtaatg attaaatcag gactaaagcc
    37441 tgttttatgt ttggcttttt taaaggcttc tatggcatta acaatattgg ttaaagtgtt
    37501 ttcactttcc tcgctttctt caaaaaagct gacgattata acattgctta cattttgtaa
    37561 attgatacat tctaaagtat ctaaaagtct aaaatcttgt aagttatttt ctttgattaa
    37621 atcgtttaca aattcttttg ctttatttac atttgaaaag gcaaagattg gcatagcttc
    37681 cacgctttca taaccagcct ttgtgtaaat catttcttta cttgcacctt ttaagctagc
    37741 cgcaatacca ataggcgtat cactttgcac tttaatagga cttgccgcac cattgctaat
    37801 attaaaatta actccataat ttgctgccat tattcactcc ttatttcttt acattttttt
    37861 gtattttttg ttttttttag gatttaaatt aagctctttt ttcataacaa tttgatcttg
    37921 tttagaaatt tcaaataaaa aggcataatc tccataagta tcagaactag cttctaactt
    37981 ttcaacatta aaatcttcac tttgaatttc ttgctcacct ataaaaatgg atttttttac
    38041 tcttacattg gtaatttctg tttgaccata atatccatta cccctagcaa aaagcttatt
    38101 aggcattggt gtattttcaa gttctatgct tacctctcta cttcctgaac tagaccataa
    38161 gcaacactca tcagcgccac cattatattt tttaaacaca tgggcgattt tgtgataggt
    38221 ttcttgataa atcccacttg ttttaatcgt tcctacaatt tgattatctg taggagtagg
    38281 attagaatct atagtaaaat cactcctatt aagcccattg ccatctttag tcatagtgaa
    38341 ttttgcgttt tcatattcat cttgaacttt atttggagta gcaaaaccat tttcaaaacc
    38401 aagtcttaaa tcactcatac aacccccata ttgtccacct gtggtagtgt tatcaaatgt
    38461 gataatgatt ttttctttag ggataatatc attgctacca tctcctagta aatcaaccca
    38521 gcttgtaaaa tcattatcat tagcagtgca aataaataat tgctttttac tttctaaaac
    38581 cgcccaaatt tctcctactt tagcttgtgt attgtagtta ggtggagttt ttgatatttt
    38641 tatgtttgta ttttggaaat tttgatcttg taaaatttcc tcaatgagac ttttaagctc
    38701 ctctttatta acaagctctt ctttaaaaag ctttagtttt ttatctataa gctcattaac
    38761 tttttgagca ttaagcttat cactaactat aggttcactt ggctcttttg agccttgatt
    38821 aatatctgga ataaaagaaa ttccataatc tttcatttta actccttttt atgctttcac
    38881 tttgtgcgaa taaaatccgc ccaaagtcgc ttttactaaa gcccccgtcc cactgcgtgg
    38941 gtagctcacc tttttttatt ttccttttat caagcatttt attgcgtgat aaagattgca
    39001 agaatgataa aatacaaaga ttttaagtct tgaacatcca agcaaagtca tagcttcttt
    39061 taatgctaaa tcagctgtcc tataatcagt tcttgaattt gctttttcgc ataaaaaatc
    39121 atgcaccaca caagcactaa aatactcact tttaaaaggt ggaaacaaag accaaaaaag
    39181 gcgtgggata ctcgctccat ctgttttaaa gccttgtggt acaatgcctt tgtaatttgg
    39241 caaagaaaaa gcataatcac taattacttc aaatctgtct ttatcatagg gctttacaca
    39301 aacccttttt aattctgttt tagtcatttt tcactctccc aaacaattaa atcaagttct
    39361 tctttgcttt gtgcatttct agctttttct tttaaagcac tcgctttaaa aatagtctct
    39421 tgcacaaaat aagccatgct acttgcaaag agtttaaact cttccacact aaatcttgta
    39481 gttgaattat caagcgcaat ccaatcaata taaggaatta aattaggatt aacaagagca
    39541 ttggttactg ctccattaat tcttaactga tcttcattag aactttggta gattttacct
    39601 ttaaaagaaa atccaccatt tagaatattt tctttttttg tattaatctc gttgattttt
    39661 aactcttttg cctcgtttaa aagctcttct tcgcttttag gaggatttat taaagagtta
    39721 aattcttctt cgctaatagg tgttaagcct gttttaattt gctcatcgct cacttcatcc
    39781 tcataagcat aaatttgatt attatcgttt ttgtctataa aatatttcat tttttctcct
    39841 tatttgcttg atgcttatct aagctccata aaagatacaa tgcttttgct tgggtaaaat
    39901 ccgctgtgtt ctggtgtatt taatctgtat tgcccatttg gtggaatgat tccaaaacca
    39961 aaataagttc gacttactcc accattggat aatgaagttt gaaacataga aactacaaat
    40021 tgctcactac aagaaaaact gataccccca cttgcactag cattaacttg aaatttggct
    40081 gctatgggtt ttcctgtatt atttgtataa gttacatcaa aggctcttga aacattttgc
    40141 caagcttgat ttactcccaa tcctcctatt aagctaggag cttgttcttt taaggtagct
    40201 aaatttacaa attgattgtc atttgtagct tttatagagc ttgtaggtag tttggtaaag
    40261 tttttagctc ctgtaatggt ttgattagta gctaaagtaa catatttagc aatttctgta
    40321 ttaaatttat tttctaaaag atatttagaa agctcatccc atactttttt aaactctgca
    40381 tcatattttt gcgttaaagc atcaatttta agattgagtt ccactttaat agcatccaca
    40441 taatcacgac ttgccataat cacactagga tctagtttta aaataacttc ctctgcatta
    40501 gaaagctcca tgacaatttt tatcataagc tctttagcac tgccttcttt taagataggt
    40561 ttataagtgc gtgggacatt tccaactgca agcaaatctc ctgcttcatc ataaacgcct
    40621 actgcattaa cttcaaaccc gcccacatcg cttggcacat gacacattaa attcacatag
    40681 tttggattgc tttcatccac gcttttgcta ctaatattag cttcatatac aatctcttct
    40741 aagctttgca tttcttcact gggcaaaata acttttgaac ttaatttaaa gctttttaaa
    40801 ttgataccat ttccacttgc tcttgcggca ataaatttag caatgccaat tttagttagt
    40861 atggtatagt attcactttt tgccattaat acactccttt aaaatcaata ttagttcttg
    40921 aaatctcaca cataaaaact ccaaatgcat ttttagtgct tttaatttca ttttctaaaa
    40981 aagtggtttg aaaaggtaag atttctatag tttctccact tatttgtgca ttagcattaa
    41041 aactatcatt tttactttca atctctattt caattgcttc taaaacgctt ctaacatttt
    41101 taaaatcata aattagtctt tctaaagtat taagcgttct ttcatcaaag ctaacattag
    41161 ttgtgcttac tttaacttta aaaaaataag gctttccacc ataattaaac cactctttaa
    41221 ccactgcagt aggaaatacg gctcttaaag cttcttttat agcccaagtt gtgccgttgt
    41281 atctatctaa aagcaaggct ttagatataa gctttcttga ttctttttca tttaaaccat
    41341 caatacttac atcataagca ttggctaaaa ttggcaataa tctttcatcg caatttagag
    41401 ctagatttgt gatactagct aaatttaaat cttcaaatct tgttttagca cttaaatcaa
    41461 tggctttgct ttgttttgga tggtggttta gtattagtgt attcatagca ccgccttttc
    41521 ataactaagt gaaaagctaa gagttgcaaa ctcatcatca gctattatta tattttctaa
    41581 gggcaagtct tttaattctt gctcttcttc atttatgatt ttttctttaa tgcttaaaat
    41641 ttcgctttta taaactccgt cttgatgaag acatttataa ataaatccca gtgctaaatc
    41701 cacacttaaa tcaaagtcct tttgcaaagc attaatcttt tcacttattt cattagcacg
    41761 gcttaattct aaaagcaaaa gtttggcatc tacgataaac tctctttttt tagctaactc
    41821 aacgctgact tcatcagtta aaggtcttcg ctcatctgca cttaaatact ctttaaccac
    41881 atcaacgctt aattcatctt cacttttaat gataactctt acttttcctg ctccattgtt
    41941 taaagctttt atggaagcta cttttgcact tgcgcttaaa gcgtgataga tatagccttt
    42001 ttcacttcct gcggttgaaa agcgatgtac actcattatg gctctttctc ttaaagcctc
    42061 atcgctttct tcactggctc cacctttgaa aaattctagt tgtttaatct tagctacaaa
    42121 aggcagtgga gtttgtaaaa actcggtttt actttcttta ctttgaataa attcatcaag
    42181 ttctaaaata ccttgtgctt tactttgccc ttttttaatc accacttctt cttttaaagt
    42241 ggcaaggtct gctttttcat ttgaaaaaat tgcacctttt gggatgatga catcataagt
    42301 aagtaaagta tttaattcaa actctacttt agctgtgggc ttaacccctt ttaatctttc
    42361 aatcaaatag ccattagcta ctacattatc taaatcactt ccctttgcat aatgaagata
    42421 agttgctttt atactctcat taattcttgc tctaattatc atttctctat aagctaaagc
    42481 ttctaaaatg gctttaaaag gatcagattc taaaagctct acattatctt ttaaaaagct
    42541 tttaaaaagt tcttcatagg cttttaaaag tttttcataa tcaagctctt ctatgatttg
    42601 tggataagga atgtctttta aaaagctttg tttaaaatag ctatcattca cacttaaaag
    42661 ctcactcatt tgcctagctc cattgttaaa tccccataat tttcaaaaag caaggtaatg
    42721 cttaatttat tgtctttaca ctcattaagt ctcacacctt ttagctttac tcttttttcc
    42781 cactttgaaa ttgcttctgc agtgtatcta gtaagtttga ttttaaaatc atcatcgatt
    42841 tttctatcta tgagtgtata aagtaaagaa ccatattcag gtctcattac tcttgagcct
    42901 aaaggagtga ttaaaatgtc tttaatgctt tcttcgatgc ttaccatgta attcatttta
    42961 aacctttgta aaattcaaaa atgttttcta gcatttgcga aaatcctaaa aacataaaag
    43021 ctataaaaaa gcctataaaa atgcttttga taaaaaagtt taggtttaaa aaagcataaa
    43081 atgcccccat gcaaaagagc ataaaaaaga ctaatgaaaa taaaagcaaa aataattctt
    43141 tcatagtttt tcctatcttg gcgaagctgt ggcaccacaa gtacaagaat gggtatgatt
    43201 tgttaaatca cctttgctat cgcttatatt tccgctaact tgtaaattac caattaagtt
    43261 taaatttcct tttatgctaa aagtaccact tgccccacct tcgccacttg tagaaattgc
    43321 tcctgcaatt tgagtattac catttaaatt aatacttgga gcgttaagcg ttatggtatt
    43381 agcgtttgta gtatgatttt tagtatttaa ggtgttgttt tggttatggg tgtttttatc
    43441 tacacaagtg atatttatat ttttaaccac atcaagtttt aaagtgctac tcttagagtt
    43501 gtattctaaa tgcgttccat cttcaaaatc tatattaaaa gtattttcat ctgtgttttt
    43561 tgctctatgt ttttcttggt aaagcccacg caaaataact ccactattta aatccccacg
    43621 cacaggtatg actaatactt gctctcctat tcttaaagga gaaaagctca ctgcataaga
    43681 attagctaga ctttgaaaaa cacttaaaaa atccgttacc atatctccaa tagcaacctt
    43741 agctttacct tctttaatgt cgcaaatgat gccaagttcg ttcattatag tttttccatt
    43801 tttttattaa ttaacttttc tacaagttgc tcaattttaa gcaatgcatc tgtccccata
    43861 taagctgcaa aaccacccac tgcaacgcta agctttatgc caaaattaag ataatttaca
    43921 atttcaaaaa ctagatatgc cacaaacata gagcctagca taccttttaa aaagagtgta
    43981 aatttacctt ttaaattaag agctttgctt aatttatttt ttgttacaat tcctacaagt
    44041 ccagctataa agcttactat cattaaaacc atatatacaa atatatcttc taatttcatt
    44101 gctagttcct tgtaaaaatt tcaaataaat ataataaagc taatgcaaaa gttgaaaaca
    44161 aaagagctat aagaagatct tttgcaatgc ttttttgatt tatcatttta ttattttctt
    44221 tcatctttct ctcctgtgca aagcttggct atattttcaa cttctaagta atatttagag
    44281 atttctttag cgctttctaa gtcttttttg tctaaaggct ttaaaggaag ttttaaaggg
    44341 catttaatag gaactttaac ttctttgatt tcagttttaa tcaaaatatc tttagaagca
    44401 caagcgctta aaaaaacaaa aggtataatt aataggaaaa ttctcatttt atcattcact
    44461 tttttgctcc taaaatatta aataattctt tataagcttt aagttcactc tggcagcttt
    44521 tatctttaat aaaaacctta tccactttta aaacttcttt taaagtctct ttgggcttta
    44581 aatcaagttt taatttatca atagctttat tttgctgggc taatttatct ttaaaaacat
    44641 tgatttcatt gctaaaatgc aaagctttaa gttttagatt ttcattttct aaagctaaag
    44701 cattgttttt taaatataaa aaaccacaaa gagcaattag aacaaaaaaa gctatttttg
    44761 aaggacttaa aaaccttgat aaaataaaac taaacacaat cttttcctta tggataagtc
    44821 catcttgctt ttttgcctct agtgtctaaa tgtacaaacc cagcataagg atcattaaaa
    44881 ttatgcttta tggcaattcc caagctcctt tcgccatagg tgtttaaaac atattgatga
    44941 acttcttctg ttttaactcc tttaaccaca aagtctgctg cacttcctat agtgtgttgg
    45001 cttttagggg ctccaccaac ctctgcatta tgctctttgc agcgatatcc actatttata
    45061 ataataggag cattgtaatg ttctctgatt tcacaaagaa tgtctataag ctcatcactt
    45121 ggtacatttt gaggcaattc acatttaccg catttacatt taaattcgct ttctttaaaa
    45181 taagggttat ttttcatttt cactccttta aaatgtcgta agtttagtta aaaagctgac
    45241 ccaaaaacta gaaaaatttt gtgctaaaac tctttgaaaa aataatttgc ttgattaaaa
    45301 aaagaactca ttttaaaatt gccgctaatt tttaaaggat gaaaaatgct taaaagtttt
    45361 gaaaatgagc ttttagaact attaaaagat tttaaagtaa gaatgtattt aggcgagttt
    45421 gaagacaccc aaaacatagc aagttgtatt aataatttag atgcttcgct tttgcttgat
    45481 tttgaaggag aaagttataa agatttagaa aataaagtgg gaacttggaa actttatatt
    45541 ttaacccata caaaatcaaa agctcctaaa cacagaattg atgctaagca taaattattt
    45601 gatgcaatag aagctgttga taaagtgctt ttaaatgcag aacctagcaa tggttttaga
    45661 atagagctta aagatcttaa aaaggtttac gaaggaataa gcgatcatgg ctatttaagc
    45721 atttatgcaa gaactttgca aagtagcttt ttaccaaaag atgatttttt aaggatttaa
    45781 aatgcttttt atcaataaag aaaatttagt cgaagttagc aatgataagc ccataaaagt
    45841 ggcaattaag ggtgagtgga aagggcataa taatggcagg tttaaggttg atgataaaga
    45901 tttaaactca atgattgata attttaatca aaaaaagatt gatttggtta ttgactatga
    45961 gcatcaaagc ttaaaaaatg aaaaagcacc tgctgcaggt tggattaaag agctttattt
    46021 ggaaaatgat gccttaatgg ctaaggctga gtttaacgaa gaggctaaaa aatatatagc
    46081 aaataagcaa taccgctatt tatcccctgt gtttgaattt aattcaaaag acaataaaag
    46141 tggagaacta gtaagagcta agcttcactc agtcgcacta actaatacgc catttattga
    46201 tgagctaggc gaactcattg ctaacaaaaa taatattcat caaaacaaag gagagaaaat
    46261 ggatgaaaaa atcaaagagc tagaatctca gattatagct ttaaaaaatg aaaatagctc
    46321 gctcgcttta caaaatgaag ctttaaaaaa acaaaacgaa gaaagcgtta aaaacttagc
    46381 aagctcttta gttgataatg ctttaaatag cggaaaaatt gctaattccc aaaaagaatg
    46441 ggcgctaatg tatgcttgta aggatttaga aggctttaaa agctttttag ataccgagaa
    46501 tgatcaagtg caagttccaa aaaataatgt ttttgcaaat aaaaacacag caaaaactaa
    46561 tgagtttgat gttgtgaaaa tgatgttagg ggattaaaaa tggctaaagc taaaaaagaa
    46621 acccaaaacc tagaaaatga agacttggaa actggagact tatctaaagc tttgtcttta
    46681 gaagatgaga acctagctaa tgaagaagct gtgagtgaaa atgaaaccgc taaggaattt
    46741 ataaatgaag aaggagaaga aatgccatca aaggtcacac caaaaagctt aagcaatgat
    46801 cctttaattg ctatgccaaa aagccttgaa agttttatca ataaagattt gttttcaatt
    46861 aatgcgaaaa tagatcttga aactaatgaa agcttagctc ttggaacgct tttaatcagc
    46921 gaagattttg gagaaagctt taaaaaatgt ccaaatgaag atattagtgc aaaagaaaat
    46981 gttaaattag caatgcttaa agatcacgct ttaagatccg gcgtttatgg ggttttatta
    47041 gcaggagaaa tcaatttaaa aggcgttcat gtaagtgcgg ttaaaaaggc ttttatgcaa
    47101 aatttaatta ttaatactaa ggagtaaaaa tggatttaga gcaacttttg gaactttttt
    47161 caagtacaaa aataactgaa gttattaatc aaaccaaagc ttcacctcgc tttgtaagtg
    47221 atactttttt taaggataaa atcccaagtt tagagagcac cgtaagggtt gaaattataa
    47281 aaggtgctgg aattgtttta aatagcattt cagataatgg ggaacattct ttagaaaata
    47341 ctaaagacgc ttatatttta aatatacctt taccacgctt tgcattagca aaaagaatca
    47401 gtgcgagtga gattaattct ttaaggtctt tagcattgca agaagctcag gctaaaagct
    47461 taagtggagc tcttggggtt ttggttaaag aaatgaaaga aagctttaac actacgcttg
    47521 aatatatggc aaatggtgct ttatttggca agattttaga tggcaaagga aatgtgcttt
    47581 ttgattttgg aagtgcaagt aagaaagcta ttagtgttaa aaaagatggg agtgtgactt
    47641 tagccagcgt ttgtgatgcg attgattcag caattattga tgaatttgga acaagtgctg
    47701 attatgaagt gctttgtgga aatgaacttt ttgcggctat ttctaacttg gcattaagtg
    47761 aagatcttta taaaaatcat cttgcaagta gggatgaaaa agataagtcc ttaattttat
    47821 atggcaccaa atatcgccgt tatagtgcaa aatataaaaa tacaaatgga aaaagcgttg
    47881 aatttttaaa aggcactgag ggtatggttg tgccaaagga taattctaat cgcatttatt
    47941 atacaagagc aaatcatact gatgctttag gaaaagcacc aagtttaatg tttgtttcta
    48001 agcctgagat tttacctcgt ggggctggaa ttgaaattgt aggcgaaatg agagccatgc
    48061 cagtttgcac cagaccaaat ggacttatta agcttgtttt agagtaaaac gcacaatttt
    48121 agctttaaag gcaaaaaatg cttttaaagc taaaaagata ttagaaaaag attttaaacg
    48181 attttaacca tattttaacc acattaaaaa aaggtttttt aaatgaatta tcaagacatt
    48241 ttagaagaaa agcttatcac agaaactaaa acgcattttt ttatgataga tgaaaaggat
    48301 ttaatcaaag aattaagcgt tcatgccata gcagagctta gcgatttaaa tgctgatggg
    48361 gtttgtgata aagaagtgat tgatgatgct attaatgatg cacaaagtta tattgcaagt
    48421 tttataaaga tacctaaaaa cccaactcct cttttaaaag atatctgtgt aaagcttaca
    48481 attatggaat taaaacgccg aaatgatttt ccaaaagaaa gcttaaaaga gattagagag
    48541 tgggctaatg atttactttt aaaaatggca aataaaaaaa ttccaactga aatcaacgaa
    48601 gataacttta tctcacaaaa caaagttaga gcgtttaaaa ttaaaagaaa aagaatggat
    48661 ttaaggagat taaatggcta aaaatttaac ttccaccaca aagcctaaga tggcaaaggt
    48721 cgggtgtggc cttcaggtgg gtgcagagag tgaaactcct gctcgtaagg ataaatttac
    48781 ttcatccgcg aagtctcaaa acaacttaaa agatttagca aaagaacttt atattgcagg
    48841 ttttgatata tttaaaattg caaaaatttt aaaccgcaat gaaaaaacga ttagaaacta
    48901 caaagccaaa gatggcgatt gggataagca aaaagctaat cttttaactt caaaaataaa
    48961 agataaagaa agtgcctcat tatatgaaag ttttactgag caaatgtttt gtgcgattga
    49021 aaatataaat actgatgaaa aaatgaatgc agaaaagaaa actgaagcca ttgcaaggat
    49081 aggcgatagc ttttcaaaaa tgagaaaggt tgcaagatta gaagatccaa gtagctatcg
    49141 tttaaatgtt gctaaaaaag tggttgaaat tatcataagt catttaaaaa atgataaaga
    49201 ttgcgtagca aaacttgtat cacttttaga aagtggagtg atagaaaaag aaattttagc
    49261 aatggatatt taatgctttt ttccaaagaa gaactcgatg agtttttaat ctcaaacgaa
    49321 caaaagcacg aaaacactcc aaatgaacta aaaggtgcta tgcaaagaaa agacttttta
    49381 gaatggatgg atgagctaaa aaatgaatta aaaactcaat ttttgcatga aagccattta
    49441 gatcctactt taaaagaaga aagaattaaa agagcgagtg tggattttga ttattttgca
    49501 agaacttatt ttccgcatta ttttaccatt aaaggagaat gtggcttaca tttgcactta
    49561 aatgaagttt ttacaaaaat cgcacttaaa aaagaaagca aaggtgaaaa acacgccata
    49621 gctgcaccaa gagctcatgg taaatccacc tacacttcac aactctttcc tttgtggtgc
    49681 ttagttttta attataaaag ctttatagta gagatttcag atgcggtcga acttatggaa
    49741 ggaatgcttg aagctattaa agcagagctt gaaggtaatc cgcatttaaa gcttgatttt
    49801 cccgaagtag taggaattgg caagacttgg cgcgtaggag agtttgtaag taataatggc
    49861 gtaaagatta aagcctttgg cagtggaaaa agacttcgtg gggttagata tggggttaaa
    49921 agacctgatt tagttatttt agatgattta gaaaatgata ctaatgtcag gagtaaagat
    49981 caaagggata aattagaaga ttgggtggat gaagcggttt taaacttagg gagtgcagat
    50041 ggaagtttag atgtgcttta tattggaacc attttacata atgatagcgt gttatctaga
    50101 aaattaaagc ttggtttttg gaatcctaaa gtcttccgtt ccatcgaaga gtttccacaa
    50161 aggcttgatt tatgggatga atacgccacg ctttatagaa atactgattt taataccgct
    50221 catcaatttt atttaaaaaa taaagcttta atggataaag gagctaaggt tctttgggaa
    50281 gaagccaaaa gcttagagga tttaatgaag ttaagggctg aaaatctaaa agcttttaat
    50341 aaagagcaac tcaataatcc aagaagtgaa aatcaaatct ttagtcttga tagcattaac
    50401 ttttatgatg ttttaccacc aattagtcag tattatatgt atattgaccc agcaggggaa
    50461 aaagcaaaaa gcgactttac tgcgattacc attattggca aaggtgcaaa gggtttttat
    50521 gtagcagaaa gcatcgtaaa aatcttaaaa gcacaaagca ttataaaaac catttttaat
    50581 cttcaaaaga tttataaatg tcgcttgatt gaaattgaaa ctaatggcgg tcaatttttc
    50641 ttaaaaaaat ggttacaaga aaaaagctta gaaagtggag tttttttgcc tttgcgtggt
    50701 aaaaataata gcgttagcaa gtttgaacgc attgagagct taagccttgc ttttgaaaat
    50761 gaagagcttt ttttacataa aagccaaact atgcttataa atcaactttt agaatttcca
    50821 gaagggaaaa atgatgatgc acctgatagc ttagcaggag catttttatt agcaagaact
    50881 aaaagtagca ttaaaagaag aaagcatcat tttaactctg tttcaagaat aaggcgtttt
    50941 taaaggaaaa atatgaaaaa agaaatcaaa tccaaaagag aagtgatatt aaaaaacaat
    51001 agtcttataa acactcttat aaactcaagc tatttaaatg tgcttaaaat cagcgagaac
    51061 gatcaaagaa tgatttttaa agatctaagc tttactcaag ctcatcaatc acgaaggagt
    51121 gtgattttag caaaagagct tcaaatcgtt tgtgaaaacg aaaaaataaa agaaagcttt
    51181 gagtatcttt tcaatcctga tttattaagt caaatcttag aaacctatct ttatgggctt
    51241 aatatatttg aagttaatta caagttaaaa gatggttttt actatccaat cttaaaacaa
    51301 agagatttta gaaattttgg ctttaatgaa aatgatgagt tagtttataa tggcaatggt
    51361 tgcgaagaaa ttgtggaaga taaaaaagca atttatggac tttttggctc taatttttta
    51421 tttaaaaatg gcgatgcctt attaacaaag ctttattttc cagtaaagct taaaaatgca
    51481 agtttaaagt tttggatgga gtttttagaa agatttggtt ctccttgggc agttgcaaaa
    51541 acagatagcg atcctgatgc actagcttct gaaattcatc aaatgttaaa tggcgatagt
    51601 gcggtcattg ataaagaaga agagcttgat ttaatccagc caaaggctaa ggcaaattat
    51661 aatgaaataa tagattactt agataatcaa ataagaagcg tggttttagg agctaattta
    51721 agttctcaag taagcggagg ttctttagca gcggctgagt cacataatca aataagaaaa
    51781 gatttagccg cccaagatgg acaaatagtt ctttttattt taaatcgtgc cattaagttt
    51841 ttcaaagaaa tcaatcattt taaagatgaa ctctatgtgc agttttttag cgaagcagaa
    51901 ccaaaaagtg agctttgcga aagggattta aaacttttta acatgggctt ttgctttgat
    51961 gaagaataca ttaaaagcac ttataatgta gagggtgagc ttataagaga gactttagaa
    52021 aaaaaagact ttaaagattt agaaaatgat aaaaaagtct ttgaaaacaa agtaaagtta
    52081 gagagctttg aagaagattt tattgacaaa ggattagaac aaaaagaata cttaaaagtc
    52141 gatgagagca tgtcaaagtt ttttcaagag caatttgaaa gcattgtaaa agattgtaaa
    52201 gattttaacg aggcactcaa taaacttaaa gaaaattttt ctagtttaga gcaaagcgag
    52261 tttgaaaaac atctttttat agctttaaat aattccagta ttttaggata cttggaggat
    52321 taaaatgaca ggtgcaaaaa taggattttt ttcagaacct actaaagctg ttgatttttt
    52381 aaaaaataaa aagccagagc ttagttttga ttatgatgaa ctttcatatt caacccataa
    52441 aaaagtcttt actattgcta agcttatgga tgaaagcttg ttaaaagata tgcaagatac
    52501 tttagtaaat gctattaaaa atggggataa atttagcact tggagtaaga ttgcagagga
    52561 gaaattaaaa gctaaaggtt ggtggggttc aaaggaagtt ataaacccta aaacaggtga
    52621 agttaaaaaa actcatttta atagtgcaag attaaaaaaa atctttgagg aaaactcaag
    52681 aaaagctaaa gctaaaacta tctatgaaaa tcaaatgaaa agcactaaac cttattttaa
    52741 atactgcacc caaaaagatt ctttggttag ggacaaacac agagcctttg atagcatagt
    52801 tttacccaaa gatgatcctt tttgggatac tcattaccca catgtaacca tgcatgatta
    52861 tggttgtagg tgtaaagtta taaatctagg cgaaagtgaa gttaaagact taaaaattcc
    52921 accttcaaat accaaagaaa gcgaatttaa tggctttaac gatgaagagc ttttagatga
    52981 gctttataaa caaaaaaaca ctgaagtcat tcaaaacttt ataaagcttg atatgttaag
    53041 tgcagcggct aaaaaaacaa aagaagttaa aagctttgct catcaaaaag aactttacac
    53101 ttggcaaaaa agcttagatg atatggtgga tgaagtatta atcaaagata atcaaaaata
    53161 tcctatcaat ttcatacaag taggtaaaat ggataaaagc accaaagagt ttttagaaaa
    53221 acttaataaa aaagacttag aagacttata ctttacactg agcaaaaaca atcttttaca
    53281 cgcaagtcct aaaagaaagg caagttataa tcaggcttta agcgcggatg aaatcaagca
    53341 aattgttaaa gttttagatg aagcaaaaga agtttattgg gataatgcaa ataattcttt
    53401 attgtatttc tttgaagata aaaaagatgc tagtcgtatc aataaaattg taattacccc
    53461 tgattataag ctaaagaagt ttggtaaaac caatgcaata gttacattag gaaaagtaga
    53521 agtgattaat aaagataata agacatatat taagatcaga taaggcggtg agacttgcac
    53581 tcacaataca taccccaatt aatttggact atcctactac tacattttag gtatcaacct
    53641 tatctaatta agataatttt agcttgatga aactaaaaag gagtttaaat ggttttagct
    53701 ttaggagaat ttgagtttaa agctttaaat tttgataatt tagaaagaag cttagaatat
    53761 aacatacaaa gtcaaaatag gcttaataat cataatgctt tatttgcaag ttctaaagaa
    53821 agcgaaaaga ttaaaataca aggcaaaact ttacctttaa aaggggatag aaatacttat
    53881 ttagataagc ttgagaatat ggcaaaagaa caaagatctt ttatcttaac aggagctaat
    53941 ggaaagtatt atggtaaatt tgtgatttta tccttaaatg aaaacagaag tgcatttgta
    54001 gatggaagtg gctttgtagc acaaagcttt agcatggatt tagaaaggga ttttgatgag
    54061 taagatttac atagctaaaa acaacgagag gcttgatagt atagtctata agcattatgg
    54121 gacacttttg tattttaatc aagttttatt agccaatcca agattagagc ctcttttaaa
    54181 aacaggggat aaagtgattt tacctagtat tgaaatcaaa gaaagcaagg aaaaggcttt
    54241 atggtaagaa aacctaagtt taaacttatt gccaaaggtg aggatatcac agaaaaactt
    54301 tctaaaaatc ttattagcat tagttatgaa gataaagaaa aagctgaaag tgatgagata
    54361 agtttaagtg tttttgggct ttattccaag ccactttttg gggatagttt agagctttgg
    54421 cttggctttg aaaagcttta taaatgtgga agctttagtg tgaatgtagt gagtaaaaac
    54481 tatacttcaa atactactga agttagagca agtgctatta attttagtgg aaaaggcagc
    54541 gttaatataa aagagaaaaa gacaagaagc tttgaaaaca ctactctttt taccatagca
    54601 agaaaaatcg caaatgaaaa caatctaaaa atcaaaacaa gtggagagga tcaaaatata
    54661 gtaagtattt tacaaaataa tcaaagtaat ttagaattct tatatagtat atgctttgat
    54721 tatggtttta tttgctgtgt aaaagaaaat actttaatca ttactccaaa agatggtaag
    54781 attggcgata atgctgctaa tatcacaagc aagaatgaaa atttaccctt atttgaaata
    54841 gctttaaaag aatgtatttc attagaaatt tcagaaagtg ctagaaatga atatagcgcc
    54901 gtaatagcag aatggcaaga tataaatgag gcaaagataa aaagcataaa agtaggaagt
    54961 ggggagaata tatataaaat gcaaatctca caaccaaaaa atgataatga agcttttaaa
    55021 aaagcacaag caaaactcaa tgagcttcaa aaaggtggat taaatggaag atgtgagctt
    55081 attgggcgtg aaataagagc aggtggaaaa cttaagatta aagatattaa tatggatcat
    55141 tatgaattta gtattaaaag cgtgagtcat agttttaatg accaagctta tataattagc
    55201 gtggagtttg agagctaaaa caaacttggt tctaaatttt ctctcaattc tttagtgatt
    55261 aaatacaccg catttaaact taaatcgtat tttttagcac attccacact tgcattttta
    55321 gtgcttattc cctgttttat gagtgtttta aaatcctgtt ttaattcttc atctctaagt
    55381 aaggttttat agcttggtat gtaaatattt gcaccgccaa attcttttaa gatttctcgt
    55441 ttgtcgttat ttttcacaaa atcaataaaa tattcaaagt attcgttatt gctaagcaat
    55501 gctagtccta tttgagtgtt tttgcaaatt atagcaaaaa agctaaattt tatttagtag
    55561 ggtataattt taaaaaataa aaaggagaat aaatgaaaaa aataataagc gttttaatac
    55621 ttgctttaag cttattaaat gctaaaagtt ttgaagaaag caaaaaagaa ttagtaaaat
    55681 tttataatga tctagggagc tcttactggt atgattttta ttgtcaagca ccttttaagg
    55741 ttaataaaaa aggaaaatat attagttttg aagtgattaa aagtgattta tatgctccta
    55801 gaaacgaata caccaaaaaa ggaaaaatta accaaagaat caaacgcata gaatgggagc
    55861 atattatggc cgcccaaaac tttggaaagc atttaccttg ctggaaagaa ggtggcagaa
    55921 aagcttgtaa aaatgatcca acttttgcaa aaatggaagc cgataaacaa aacctagtcc
    55981 cagccatagg agagataaat ggggatagaa gcaattttag atatgctgag gctcctacta
    56041 atttaaaata tactcaatat ggaaattgta aggtttatac tgattttaaa gcaaaaagat
    56101 tttatcctgc aaattattct aaaggctgga ttgcaagaag ctatttatat atgagtaaga
    56161 cctataatat taaattgtca gatcaagaaa gaaagcttat ggaggcttgg gataaacaat
    56221 accctatgga tgagaaagaa aaaagaatta gagaattact ctaattcttt gcaaacttta
    56281 gccacaattt catctatatc aataaccaag cttttatctt cttcatcaaa actctcatca
    56341 agtttttctc tgatattaca aaccacatta agcaaaatcc caaaatcttt atcagtttta
    56401 atctgatgag tgattccatt atgcattatt tcaaggcttg ttctttttgc ggcaaaggca
    56461 atttgtgagt gtttttctat gcctaaggtt aaaaaaaact ctgcatcgta agaatgtatt
    56521 tctaaaatca ttttaatctc cttttgtttt gatgagacaa cattagcttc gtttggctta
    56581 atgtgtgctg ttgttttcta aatttttaag ccctaggata actttattag catcttctat
    56641 acttaaatac caaagatgca agggtcgctt ttttacaata ttattaataa actctcttaa
    56701 agcccactga gtaggatttt tagcattttt actccaaatg gcttgtatca tattaagttg
    56761 cttttttgta gcccttccgc ttttagtgtt ttctttttta aaataccttg cttttttggt
    56821 attttgcttt tttaaaaact tttcatcata gcccaaagtt atagcaaagt cccttagttc
    56881 atctatgctt aaatccttac ttgaagcttt gccatatctt tcatttaaaa cccagcgata
    56941 gctttcatca tcgcttaaat tagtatcttt tcttaaggta tgaatgattt taattaagtg
    57001 cttttttaaa gtgttttgag tattcatttt ttagccttta aaatttgctc tagttttgaa
    57061 gtgaatttat caatatttgc attataaagc ttattttgat tctttttgta ttctaaatag
    57121 ttttgctcgt aatctttatt tattttagtt tggctaggaa tttgagtttt aataacaggg
    57181 cttatttcaa ttttattatc aaaaataatt ttatcttggt ttttaaacat atattcaact
    57241 agcttattat aaaactctcc tgcattaagt ggttttcttt gctcatcaca aagctcttta
    57301 ttagcattaa taaaataaag attatcccca caatcaacat gctttaaaac aggctttcct
    57361 aactcatcat aaacaatatt accatcataa tatctaagta caaaagaata tgagaaatct
    57421 cctttttttg tttgaaaaat aaaacgattt gaaaatgaaa tgaaaagcca ttctaaaaaa
    57481 gactctatat ttttgtacct taagtttaaa tcaagctctg caaaggcgca cacaagagaa
    57541 agtttttcat agcttgtacc aacaaattgc ttttttaaca tggttaaatc atagtatttt
    57601 ttaaagccta atatatcttt tggtgttttg gctttaaaat aaagtttttc tataaccact
    57661 gcttgaactt cactaatacc aaaaagctct tttagtgtct cttttgcatt atccattaaa
    57721 actcctcttc tagccaagaa gctaaagctt tttgcttatc tttgtttttg tatttgtttg
    57781 ctaactttgg aagccaagtt gaattaagtg ctcttttcca gcattttaaa ggctttttat
    57841 tagccatgag ccaccttcca tcgtcttgct tatagtaatt tataaagcta tctgctataa
    57901 aataagggat agagcaagag tttttagcat taaactcatc aatggcttta attaaatctt
    57961 ctttgcttgg agggttaaat ttcataactc atccccaaat aagcttaatt ctttgtcgtt
    58021 gctgtcttta ttgtcagctt ttaaactttt ccaaacaaaa gtgcgaccat tttccccgcc
    58081 aagctcactt tcccaaaaaa cacctttaaa tttctctaaa gtattccttg aaaaattatc
    58141 actcctgctt acatcaagag ccgataaaat ctcacttgtg cttaggcttt tttcttttaa
    58201 aagctttaaa actttttcta taaaagcttc ttctttatcg ctgattttag cgttttgtaa
    58261 atcggtgttt ttaatattta gagtttttgt attgataaaa aaggcttgat ctttaattcc
    58321 tgccctttct ttttgcacac taagcaacac ttcaaaacct tgctctaaat tagccacttt
    58381 ttgtaaaaaa tacatgcaat cacttgaatt tctaatatgg tttgagcctt taaaagctct
    58441 gccatctttt gtagaatggt gtaaagctat aatggttgcc ccacattctc ttaaattcat
    58501 gagtaaagac attaaagaca tcattttagt atcattatca atatctgcaa aattgcgtaa
    58561 agaatcaagt acaaagaaaa ccccttcata gcttcctgcc acgcctttat tctcaatcat
    58621 ttctaaaagc tcataagctg aagtttttaa gcttgatcta tggatataag tgaatttgct
    58681 ttcatttaaa ataagctcac taaaccctct ctcatttaaa acatttaaag gattatccat
    58741 atcaatataa acgatgcttt taacccttac atctttgcaa agtgttttag aaatggcagc
    58801 acttaaataa ctttttccac tgccgccatt tgcataaata atagttattg cttttttaac
    58861 taaaaaatca gggattaaaa actctaattt ctcatttaaa tctttatttt ttagcttaaa
    58921 ctcatttaaa aaatccaaat tcattttatt ttttccttgt caaaacttaa tcaaacccac
    58981 taattagtga gttttgttaa attttttggc tttttttaac atatttcatt tttatgttaa
    59041 aatttttaat attttttaac attttaaaag ttcagggttt tcgtggatgt tgccgatgat
    59101 ttcaatggta tatccttcat cttcaactaa ataaattaaa gaacccatgt aatgcccact
    59161 tttattctca agataaaaag tcccttcttt atgaatgcta atttttgctt ctaagtaatt
    59221 gaatggattt ttagccttaa caatatcatt ttcatatact tttttaccat ttttgtcgta
    59281 aagtcttgta aaaagctcaa cttcaaattt tctatcatat ccttcaaaat taattctttc
    59341 gttgtcacta taactgctta aaacaacatt gtgtggacct tttatttgtt taattttaaa
    59401 aattgatggg tttttataaa attcttcatt gtcctcatcc caaatcctaa aatcaaaatc
    59461 ttgtagtttc atttgttacc tccatttata ctttttatag ttttttgcca ttcctcatcg
    59521 cttttaaact cattattaag ttcttttaaa agtttaagtg cttcatcatt agacaaatta
    59581 gaaagaatag ctcttattct ttctaatggc ttgatatcct tatggataat tccaaagaat
    59641 tcctcttgct cttttgtgct taaatcttca aaaagttcag ccaaatcatg agcgtaaaaa
    59701 tcttctaaat cactcgcatc tatgcttaca ttgacataca tttttaatcc ttttgtttta
    59761 aattaagttt taaaaactta atcaaatccg ccttagcgga cttgttaaat tcttttaagt
    59821 ctgatttttt tgctttgaag tcgttcttta aacctaattt tttgctttga agtcattttc
    59881 ttttttcttt taaagctttg cttttttagc tttggcttat ttttaaaatc aagttctaaa
    59941 aagtcattaa aatgagcggt ttttgtttta aaaacactat ttaaaagttt aaaagccgct
    60001 aaggaaagct ctctcatttt tctatctcca agctttcaat ctttggttct attctaaaat
    60061 tatcttttgt aaccctttta agtccaagtt ttactaaagt gctatcttca agttctacta
    60121 tagcttcttt gttgagttct tctttgtaag tgatacactc attaagccca tagcttttaa
    60181 aggctttaat taaactttct agtttttctt ttacacgtgg taaagataca cttttactta
    60241 agcgataacc aattttgcca aaggtaaatt ccttagatct tttttcagca aattcatgct
    60301 tattgttttc acaaaaagta gtgatacaag cttctatata tccaagctca tcacttaaaa
    60361 ctttaatctc tcctgcacgg ctttctttga tttcattgca agctaaagtt acctctccat
    60421 tgattttttc tatttgcaca ctaagctctg ctactttttt aagtgcaaga tttacatctt
    60481 caaaactatt tatttgcatt tattctcctt taatttatat ttttcgattt gataatccca
    60541 aaaaaccaca ccatatttta aagacatggc atacttattt cttttcttga ctattcttaa
    60601 accctttcta taagggcaac tctaaagtta attctttaat tcctagcttt ttagctaagg
    60661 ctaattcttc ttgcatacct gttgaatttt tagcgtcttt gtgtttgcta agataaatat
    60721 aatcacacgc ttttaaaagc tctctcccca tttgtaaagc tttgtctctg tgtttattct
    60781 cttccaaata gctaaattgt agtatgggtg aaataggcgt aaaatcttca cattcacgta
    60841 taatttttaa gcattcttgc tcggcaacgc ttatggctaa tgatttgcgt ctgctttctt
    60901 gcacagctaa gcctttataa ggacttgcta tataaactaa tggcattgtt ctcctttttt
    60961 gatgatttta gggttttacc ctttttaagt cttcttaaaa aaagacttaa aaagaaaaaa
    61021 cgcaattaaa gtgcttttaa atcaagcact tttattcagc tttttattca aatgaaaatt
    61081 aagaattttt tgtgcaatat aatcaggata aattcctttt aaaacatcca caaaagtgcc
    61141 gcttttttta aaataaatac ccgcaccttt tacttcaaac aatgaagcac tatagtctgc
    61201 tttttcgcct ttaatcattg ttgtcatgat ctactccttg tattaaattg tttctttttg
    61261 ttttttcttg ctctattaag tctaaagttt caaagatagc aagccattta tctttatttt
    61321 taggacttct taatttttta atagcgtgtt tatagatttg atgaacacgc gtcaatgaaa
    61381 tacccagttc ttttgctatc tcttcaaagg tcatttttat cccaacatta aaaatgaagc
    61441 tgcggcttct atgtgtttaa gctcaaccgc ttttccatct gcaaattcac aagctctttt
    61501 taaaagcttt tcgctttttc taaaattgcc acgagctaag ttaaaaacca aatcaattgc
    61561 ttttttatct tctatattaa aataggagca aagagttttt aaatcttcat tttttaaacc
    61621 ttctttgttt tggtagcaaa gtccttttaa ttcccatttt gcaccaattc tagagcttag
    61681 ctgtccatac tcgttataat catttctgcc aatgcctgta agattgtttt taagttttct
    61741 agtacctact aagattaaag cagtatttga aaaatcatat atgcgtctta agcactccaa
    61801 agcacgaaac ggcaaatgct cactctcatc tataattaaa acctttgaag ttcttgctaa
    61861 ctcgctagca atgcctctaa tcttatcatc caaagaacct ttaaaacaca cattgagttt
    61921 attttcaagc cccaccaaaa gcattctttt actagtttct gttgtagctt caaaaagcac
    61981 cactcttgtt ccatttttag tggcatattc tttaatggct ctgctttttc cagtccccgc
    62041 ttcgccaata atcactccca tttcgcgatt gctcatggca ctttcaatgg ttacattaat
    62101 tgcttttgca tctttagtgg caataaaagg tgtttgaagc tctttcacgc ttttttcttc
    62161 cacaaagctt ttaatgtatt tttcaagtaa agactctact tttgaagcgt atttatagct
    62221 acttcctttt ttcatatagc ccaccatata gcttttatta atccctaaac gatcggagag
    62281 attgttttga gagatgtttt gggtgcttaa aaacttttta gtaagttcta ctaattgcat
    62341 tttttatcct tttgtttttt atgagtaaaa actctttaaa acttgaatta atcaagcttt
    62401 aaacaatttt taaccagcaa aatatttctt ttcgacaaaa gcttccatgt caaactcgct
    62461 ttcatcgtta tttatttctt ttttagcgtt taaaataagc tcatccgcat tagcattgtt
    62521 tttaatctct tctaattctc tttgagtttt taaagtttct tttgcaaggg atttttgatg
    62581 cacctcttta gcttctacga gtgagttttc aaaagcactt tgtaaatctt gtaagtcttg
    62641 tttaatatta agtttagtaa agacggcaat ctcatctttt ttaagcactt ctttaatcgc
    62701 tttaacttca ctttcataac cttttttaag cattttatag ctttctttac taagtttagc
    62761 gatactttca tcaagtgcta gacaaaggaa gtttccgctt aaatcataaa tgaaaagctc
    62821 tttaatatta tcgatatttt gtacacattt aacttttgtg ccaacacttg gcattaaagc
    62881 acttttataa actctacttt caaagttaat gcctttttta cccacgaccc taagttcttt
    62941 atttccagcg ttaaacaaaa attcttcata agagattttt acaatagctc tatcgcacga
    63001 gttccaaagc tcaagtggag ttttaatgcc ttttttacga cgaactttgc tcatgttcca
    63061 tttaatcact tcagcttcta aaaactcaca agcttcgcta aaggtaagaa gtaatttttg
    63121 attagttttt ttagcaaagc cgtattcatc tttagcacgt ctatcttttt taggagtttt
    63181 ttgctctatc atttctcttt tggcaagatt attgccaata tgtccatgca ttttagaaat
    63241 tcctgcatgt tgaagtgtcc caaagcgtct ttcaactaaa gctttttgtt ctcctgcata
    63301 agcaatagct gcatcatagg taatattaag cccatcaagc aagctttgaa aatctttaga
    63361 aagataatct tttccattat cccctttaat catatcaggc ttaccaaact tatctatagc
    63421 tttccataaa agacgcgtca aacttaaaga atttgattta cttactaaag tagccacacc
    63481 cataccgcta aagacatcaa cgacacttaa gatatgaggg cggaaaggct ctaaggtttc
    63541 atcatctctt actataatat cagctgggga actatcgatt tgccaacaca tgtttttcat
    63601 gtcatatagc tctctttgat ttccttgtgc agggagaaac ttagattttg cacgatctaa
    63661 gccttgagta ataatgcaat gttctaatgg tttatctttg tagtagtttt taataaagtt
    63721 ttgcaaggtt tttacactaa agagtggctt tacttcccct aagtcaaaac ctataaagtc
    63781 ataattttct ttagtagctg cttctttatg aatttgccac caaagctcag tgaaattaaa
    63841 tccacctgct ccaaaggtgc gatactctct taaggcatat tcttgcatcc aagcactaag
    63901 tttagtttta tctttgcggt gaagtccgcg agtgtcgact aagcctagaa tgccatactt
    63961 tttatagtct gaacgccagt tagaataatt tctccattct acattacata aaaacaatgc
    64021 tcttttgagt gtaagaccac cttcaatata tttttctact tgtttaagta attttacttt
    64081 acttttcgca tcttctttaa gttcatcgct taaattttca aattttaaat ttaaaacagc
    64141 caaatcatca tttatttttg actctgttaa atttaaatta ctagttttta aactattatt
    64201 tatagttttt aaattatcgg tagtaataat ttcgctcaat ttaacttttt gcattttttc
    64261 atcataaatt aaagtatttt tagtgattaa ttcttggtta aaggcggtta aaagcttatc
    64321 tttgcttatt ttaaatagta gttttttgcc acccctgccg cctttttcat tatctacttt
    64381 taaccactcg tatttatttg agtttctact tgctgcaagt ctcaaagcac ctgtgcttac
    64441 attaaaagct tgtgcagctt ctttggtttc taagaaatac actattttaa tccttgcgga
    64501 agctcattaa tgatgccgag ctctaagagc tttttaaata ccgcttttgt actaccctta
    64561 gtatttcttt cacctgtaat ttcgcctttg ataattctgt gtaaaatatc gtagctaatg
    64621 ttgtgagttc tagcaaaagc ttttacatta atagcattgt tttcaaaata tgctttaatc
    64681 attttttctc cttcaatact tcaattttaa ttgaagttta tttttaattg tgataaaatt
    64741 tcaattttaa ttgaagtatt atagtaaaaa attttacatt agtcaataaa atatgttaaa
    64801 tattttactt tttataaagg taatatatga ccgcaaatga ttttaaacaa ataagagaaa
    64861 aattaggact tacacaggaa caattaggta ataagcttaa tttaacaaga cagcaaatta
    64921 ttaatataga aaaaggcaaa acacctatta gcaaaaaata ttttgataat ataagcaagt
    64981 taagtaaaaa attttacatt gataaagagg aaaatgcact aaataaagat agaaataaac
    65041 aagaaattaa tttttattct ataccaaaac ttaatatttc agcctctgct ggtggaggta
    65101 atgagttgat aggattagag gaatacgaaa caggtgaaat gcttgaactt agtaaagcct
    65161 tttttaaaac aactccaaaa aatgtaaaag ctatcaaagt tgatggatac tctatgattc
    65221 caatgctttt acctgatagt tgggttatat ttgaagaaat acacgagtat caaggagatg
    65281 gactatacat tttaaacttt gataatcaac ttatggttaa acttttgcaa ttagatccaa
    65341 taagtaaagt tttagatatt attagtgtaa ataaggatta taaaagctat agtttggact
    65401 taaaagactc acaagttgaa atcattatac agggtaaggt tttgcgttct attatataat
    65461 ttaaaggaaa taaagtgaat atagtattat cgatattagc agttattttt atttttctct
    65521 tatgtaatta tttatataga aaaataaaag gaataccaaa taagccggta aaagaaattt
    65581 ggaatgaata taagcaggaa atgcaaaaaa ttgatgaagt acataaacaa agaatgcaaa
    65641 aaataaatga aaattttgaa aaagaaaaag agcgaaaaaa ggacttgaaa tttaacaaat
    65701 ttcaaacaac ttcacatgaa atttttacca taaaaactcc agagaatgaa gatgttgagg
    65761 ttgaattagc ttgcacggct ggattaattc aaactagcca aattgattat ggagagtttg
    65821 ttaggaaaga atttttatac aaatgttttc cagtaacttg gaacgatttt ttaaagctta
    65881 acaagtatga aaaaatattg gcatatacag ttaaagattg taatgatatt ggattgttaa
    65941 aagaggttta tgagcaaatg ttcaaatatt taaaatggca aagtgagctt cctgaatatc
    66001 ttaaaaaaga tatacgatct agaaaaagat atttacacga attttcaaat cccgttcaaa
    66061 taaaaagcaa attaagctta aaggcttatc gctactatat caacttcttt ttaaatgaaa
    66121 taccagaagg aagctatttt cctatgcaaa taatgcatag gggtgatgag ttgagcgaag
    66181 ctttatataa tacttatttt ttaaaagatg atgaaagtat agatatgtat tatccaccaa
    66241 atttttatgg agacacatca agttttgaca tagtagaacc tagatttttt aacagtaggg
    66301 aatattataa aaattacaaa ccttttaatc gttttgattt aaagccacac tctgattacg
    66361 actttaatat tccaaaatat atagtaaagc attatttgga tatgaaaacc attgttaaag
    66421 aagatgaaca tcataaacga attttttgtt agttttattt taataaagtt atattttaag
    66481 tttaaggttt gtagaaaaat aaaatttcca cttttatgga agttttattt ttccaaatgg
    66541 aaattttatt tttccgccga caaaaactgc aagaaacttc agaagaagac aaaaaagctt
    66601 tcaaacctat acaagtagaa agtaaaagcg aaacctacaa agatgataat aaaatgaatg
    66661 agcttttaag aaaactacta gaaactaaat ttggcacaag cgatgagcta gaaattcttt
    66721 ttggtatgaa ttttagcaat gataatgcag gggaatttaa taaaattctt tctcaaaaca
    66781 cttcagcaaa aattatagat attaaggctt aaggtttttt aattataaaa atcgatcaag
    66841 ctaaactaaa aaattcttct attttttttc gcattttttc tgtattgtcg atacgattga
    66901 cttcatctct aaaggctgaa gcgtctttgt gtcctttaga atactcgtgt aaatgcttgc
    66961 gaaatatact tacgccttga tctttgtagt gttttatcat ttcatcaaaa tgagtgagta
    67021 tgatttcttt tttgagtttt tcatctacac ttttaccgct tttgatttca taaaatatcc
    67081 aaggatttcc tacgctcgca cgccctatca tgagtccatc acattttgtg attttataaa
    67141 cttctttagc gttttgtgtg ttaatatcgc catttgcaat cacaggaatt ttcacgctcg
    67201 ctttagcatt ggcaatggat tcataatcgg tttttccgct ataaagctgt tttcttgtgc
    67261 gtccatgaat acttacaaaa tccaccccca agctttcgca aattttagcc attttttcag
    67321 gatatttttc attaaatcct agtcgaaatt tcacacttgt aaggcttttt ttattgtttt
    67381 ctttaatcac tcctacaaga tttttaaaaa gctctaaatt ttctagcaaa gcactgccag
    67441 cacattgttt aacaacttta tttacagggc aaccgcaatt aaaatcgatc ccatctacaa
    67501 aatccatttc atttagcatt tgcactgctt tttttagcac ttctttatct ccacctgcaa
    67561 tttggactat ataaggattt tctaattcag ctctttctag catatgtaaa gttttagaac
    67621 tttcataaac taaggcatta gaacttatca tttcacttat ggtaatatca gcaccaaatt
    67681 tttttactac attacgaaaa ggcagatctg aaaaacctgc cataggggct aaaaacaggg
    67741 gttttttgct aaaatctatc attgtatgag ttgatttaga tcgattttga tatttttttc
    67801 acgcaaggct aaaaaggctt taaaatcatt aaatttttta tcatcattgt gaatttgttc
    67861 tcttaactca tctaaaagtc caaattcagc caaaagatat aaatatgctc ttaaagcttc
    67921 gcttttttca tttttaattt tgttaaaaat tcctaaaata gcatcaggat ttaaaagttt
    67981 agtacttagt tttgctgcgt taagatagtc tttttcgctt aatatgttgt gtgaaagtaa
    68041 aacttcatat tctgctacac taagttctaa atttccttct ttaaaacgct tgataagtgt
    68101 gagaacttca gaaggctttt tagggatttt tacattttta atttgctcat aactagcttt
    68161 ttctataaga gtgttaaaag caatttcttc aaattcatct ttgatttcat taaggttttt
    68221 aagtttgtta taggcataat ttgcatcatt tttgagatga tttttttcat tttgcaaata
    68281 taaaacattg ttattttcga gtttaaattt gctaaggtta aaaaattcgt ttttatttaa
    68341 accatcaata agatctaaaa tttcattgat tttatttgag tgtggaattt tttcatgtgt
    68401 ttttatggtt ttaaaaagtt gtgctacaga tctaaattct tttgtttgaa aagtggtttt
    68461 aagatctttt tcaaggagta aatcttgagt ataagcttca aatttagctg catctttaaa
    68521 aaaatgctta aattttaaat aacgcaaaaa tccataaaat gctatgtgta aaacggctaa
    68581 aatcatataa ataaataaag gaataacaag ccatatcata ataggtagtt caaaggtata
    68641 agtgctgata tttagagtat agcttcctag ttctagatgc caagcaaagg caaaaataag
    68701 tgctatataa ataaaacttg caagtaagaa gagtttaatt ttcatgtttt tttccttgtt
    68761 ctgcaatttg acggcaagtg atacaatatc ttgcgtgagg tttgactttt agtctttgag
    68821 agtcgatttc atcatcgcaa gattcgcaaa ttccataagt gccgtttttg attttatcta
    68881 aagaatcttc gatttctata agttcttctt tgagattggt gctgatagca aagtcaattt
    68941 gagagcctgt ttctatgaca gaaaaatcta cactatcgct tgggacgcta ttgtgaagag
    69001 cttcgatttc atttgaattg ctttgcaaat tttctaagat ggcttttttt ctttcttcta
    69061 aaatattttt gaaattttgt atttcatttt ttttcatttt aaaactttct atttgtgata
    69121 agggtgattg ttgttgatgc aaaatgcacg ataaatttgt tctaaaagta aggttttaac
    69181 aaattgatgt gctaaagtaa gtttgcttaa tgatagtcta aaatccaaac tttgattaaa
    69241 ttcttctctt aaaccataag cacctcctat aaaaaaactt aattcatttt tatcttggat
    69301 gagttttgca aattctatac ttgtaagatc tttccctttt tcatcaagag cgatacaata
    69361 gcctttttta taaggcataa aagcttcttc atagcttttt tttgcttcta tggcatttaa
    69421 attttgagct aaggctattt ttttattaaa aacatttatt tcttttaaag tggcgtattt
    69481 ggagatgagt ttagagtatt tctcactaca agttttaaat tcatcacttt tttgaataca
    69541 aaagatatta acttgcaaat tattttccac taaaaaattt tagtacatcg ctaagatatt
    69601 gtttttgttc tcctctttca actatggcat ctataagtcc atgttctaac aagaactctg
    69661 ctttttgaaa accttcaggt aaatctgctc ctatagtttg tttaataact cttgcgccag
    69721 caaaacctac taaagcttca ggttcagcga tgattaaatc tccaagccaa gcaaaagaag
    69781 cacttactcc acccatagta ggatcggtta aaatgctaat ataaggaagt ttttctttgc
    69841 taagaagttt aagtgcagca ctagttttgc tcatttgcat caaagaataa gtactttctt
    69901 gcattctagc tccaccgctt gcacttacga tgacaagaga agttttgctt gtgatagctc
    69961 tttgtatagc tctaacaatt ttttctcctt caacagaacc taaagatccg cccataaaag
    70021 aaaaatcaaa tacaacaagt tgggttttta aaccattgat ttcacattct ccactgatga
    70081 cagaactttt tctacctgtt ttactttcac cttcgctaag gcgtttttta taggatttgc
    70141 tatcaacaaa ttttaaagga tctatagctt ctaaatttgc atcatactca ataaaactgc
    70201 cttcatcgct taaaagttta atacgttcat cagctgaaat tctcatgtga taattgcatt
    70261 taggacaaac attaaaacaa gattctattt ctttataata catcaaagca tgacaacttt
    70321 ggcactttac ccagtgattt ggcgcttctt taacgctagg ttgttgtctt cttatttttg
    70381 aaaaaatatc tgcaaaattc atatattcac ctaattattt tttaaaaatt ctaagattat
    70441 atcaaaaatt tttttgtctt ggcttaggag aaggaaattt tcattttttt ctatatataa
    70501 attttgatga attgctaaag cagctgctgt atcaaaaatt cgtgtttttc caagaattaa
    70561 tacaaaacta aaatacgaag cataagcaag acttaaggct gttgcaccca aagagcgaaa
    70621 ttttaattga ttttttgtta aaaaatcgag aagttctgga taaagtgaaa ttttttcaac
    70681 tatacctatt ttagaaaata gattaggtgt taagggtgag tattttggat cggaaagatt
    70741 ggatttaaaa gcttgtttgt tattaaaagc aaaaatttct tgactgacaa gattgcaaac
    70801 aaaagcactt tttgcctgat ctttttccat aagagctata gaagttccat aaaatggtat
    70861 tttagaaaca aaatttgaac ttccatccaa aggatcaaga atcatttgtt ttgggctagc
    70921 ttttccgatc aatccgcttt cttcagaaaa aatttgtcca aaacaactaa gatattttat
    70981 gaaaatttgt tcacatttta agtcaagctc atagccttga tttttatcat agcctaattt
    71041 agagcaaagt ttaagatcat tttgtgggat attgtttaga tacttgcgta tttgcaaatt
    71101 tgcattcaag caagcatcta aaaattcttt cattaaaagc gtgttccaag attaaattca
    71161 aaactattag tatcatcacc ttttttatca ttaagaggtt tggcaaatac aagttgtaaa
    71221 ggtccaatag gtgtaatcca ttcaatgcct atacctgtac tcattctttt tatttcatct
    71281 aaatttttac gccctatcat accataatca aaaaacacgc taccacgaag tttgattcta
    71341 tcaatcaaag gaaaactaag ttctacggaa ttggcaaaag ctatggttcc gcctatttca
    71401 tctccccatt gatttttagg acttactgtt ctgctttcaa aaccgcgtat cgatctaata
    71461 ccacctaaat aaattctttg gttaattggt aaataacctt catcccatac tttataaaaa
    71521 ctcgctttat agcgataaat aagatcatat cctatatagt cttgcaaacc ttgataaaag
    71581 ttaaatttag agcttgatga aataaattct tgatctccgc caagtccagc gtattctaaa
    71641 ctagttgaag caataatacc tgatcgtggc agataataat catctgtatc gttaaaggtg
    71701 attgctggag ttatagagct tttaatactt ttgccaagtt catatcctgt tcttaaaaga
    71761 gttggactta agtgatatat atcgctttgt tcaagattat aagttaagct tacattatag
    71821 tatcttgcaa attggcgtcc aattgttata tcaaagccgt aatttttttc tgaataatta
    71881 tcccattcat agtcatttga ataaagtgtt ccacccagac tatattgact atcaagaacg
    71941 cgtggattta cgagactaat ccttcccgat aaagtatcat cgcttttatc tacgcttaca
    72001 gagcttttta ttcctgaacc aaagatattt gtatccgata aagaagcgtt aagcaaaata
    72061 ccatcgcttg atccatagcc aatgcctcca gaaatagctc ctgtagaagc ttctttaaca
    72121 tcaacaatca aatcaatatg tgtatcatca actttttctt ctttgatatt tacatcgtca
    72181 aaataagaag ttctttttaa agcatttttt gactcgctta agtctgttct attgtataaa
    72241 ttaccttctg ttatatataa ttctcggcgt atgacgcgat ctacggtgcg tgaatttcct
    72301 gaaataataa catttcttat ataaacttta tcgtgaggga ttactttaaa tacaacggtg
    72361 gcttcttgag tttgatcatt tttttgaata tcaggataga cttctacaaa cgcataaccc
    72421 aaatcagcac tttgtgtttc tatggtttta acatcttttc taatgtcttc gatattgata
    72481 gttttgccag cgcttgatct taaatctttt acggtttgtg cattttgctt atcatcaaat
    72541 aaaggatttt ctatgcttat acttttaatt ttataaggct ttccttcttt gataaaataa
    72601 gtcaaatttg cttgataagt atctgtgtag gttttaagat aaggggagga tacttgaaca
    72661 tctaaatatc cttttttcat atattcatca gcaattcttg aactatcgtt actaagttca
    72721 aaaactttta attttccatc attgcgtccc cacatccatc ccataaattc tttttctttg
    72781 ttaacaacag caggttctat atcagaatat gaaaatttct ttgctccact taaatgaaca
    72841 ttatcaataa tgatattttc accacgattt actataaatt caagctctag tccatcagta
    72901 ttttctaaag tctttttttt gtattctaca atagtatcaa aataactttt tgcttcataa
    72961 taagctttaa tgcgttcaat agcttctttt atatttcctt catcaagtag tgtacctctt
    73021 ttaatcccta aaatactttc aacttgtttt ctatcatttg aagctatacc tgtgatagta
    73081 acctttgcta tagttggttt ttcagtaact ataatttcca aaattccatt gttgttttct
    73141 actgcaatat tttcgaaata attttgttta taaagattaa gaatagcagt gttgattttt
    73201 gcaggattta tttcctcgcc tattttaagc cccgcgatat ttatagcgct tgtgttcgat
    73261 aaatgattta atccgataaa tttaatatct ttaatggttg ctgcattggc catagcaact
    73321 aaagcacaaa tactaataag atgttttttc attgattttt tacctaaagc tttattaaaa
    73381 gctgtataat agcaaaaaaa atttaacaaa aaaactaagg tagaaagtat gaaaatagca
    73441 attatagggc ttgggcttat gggtggatct ttagggcttt gtttgaaaga aaataagctt
    73501 atttcttgtg tttatggtat ggatttaagc aaagaaaatg aaaaagatgc cctgcaatta
    73561 ggtcttattc atgagcttat agaatttaaa gatttagctt tatgtgatat gatttttgtc
    73621 gcaactcctg ttgatgctat tatagaaatt ttgcaaaagt tagttgattt gccttctaat
    73681 gtaacaatta tagagcttgg aagtacaaaa agaaaaatta tagaaagttt gcctaagaat
    73741 ttaatcaaac aaactctttt tgctcatcct atgacaggaa ctgaaaattc aggtccaaaa
    73801 gcagctttta aagagcttta taaagatgca gtttgtgttc tttgtgatag tgaaatagct
    73861 gatgatttac atcaaaaaag agcggtagaa attttttctc atttagggat gaaaattgtt
    73921 tttatggata gtaaagccca tgatcatcat gctgctatta tttctcattt gcctcatgtt
    73981 ataagttttt ctttggcaaa ttttgtaatg aaggaagaag ataaaagaaa tattgttcat
    74041 ttagccggag gatcttttaa aggtatgagc agaattgcca aatcatcgcc acaaatgtgg
    74101 gaaagtattt ttttacaaaa taaagataac ttattaagtt ctattgattt ttttcaacaa
    74161 gaattagaga gatgtaaaca aatgatacaa ttagacaaaa acgatgaatt aagagaatgg
    74221 atgaaacagg ctaataccct aagagaaatt ttataaattt gctagatatt tactgaaaat
    74281 ataatagaat ttatattaaa agcaacaaaa acattgaaaa tttttaagga aggttatggc
    74341 aaaaagaaaa ggcaaaactt atttatctgt tttaatttta gttttaatag caattttgat
    74401 tttttttatt tcaagattaa gtatttttga aaaaaatcct cctcaaattt taatgccaga
    74461 tgttgtatat actgatctta aaaaacctat tttagtgcat attaaagatg atgaaagttc
    74521 tatcaaaaac gtacaaatta tattgcataa agacgacaat actagtgcaa tggttatagc
    74581 agatgaaaag atttctaatt taaaagatat taccttacaa gttgctttgc caaaatttgg
    74641 ttacaaagaa aatgtaaaat cttttgtttt ggaggtgata gctaaagatt ctagtttttg
    74701 gaattttttt agtggcaatg aagcaagaaa acaaattgcg gtattagtag ataatacggc
    74761 tccaaaaatc aatatcataa gcaattctta ccaaatcgag caaggtggtg ctggggcagt
    74821 tgtttttaag gctgatgatg ctaatttaga taaggtgtat atagaaacaa ataaaggtaa
    74881 aatctttaaa gccacacctt atgtaaaaga aggatattat gcggctttga ttgcttggga
    74941 tgcaagagat gaggaatttc gtgcatttgt tatcgctacg gataaagcgg gcaatatttc
    75001 aaaagaacgt ataaggtatt attttgttaa tcgtaaatat cgtgtttcaa atatcaatct
    75061 aacggataaa tttttagatg gaaagattga gaatttagca aatcagtacg ctccaaaaga
    75121 taataatctc aatcgttatg aaaaatttaa gtttgtcaat gaaactttaa gaaatagcaa
    75181 tgaaaaactt atccatgaaa tcacttcaaa agtacctgag gaaaaaattg ataattttga
    75241 tttgaattta tttttacctc ttaaaaatgg tatgaaagta gcggattttg ctgatcatag
    75301 gtattattct tataatgggc aatttgtgag tgattcttat catatggggc ttgatctagc
    75361 aagcgtagca caagctccta tcataagtaa taacgcaggc aaggttgttt ttgctgctga
    75421 aaatggaatt tatggtttaa atttaattgt ttatcatggt tttggagtat atagtcttta
    75481 tgggcactgt tcttctaaaa atgttgattt agatgaaatg attaataaac aaagcattat
    75541 aggcaaaaca ggaacaagtg gtttagcctt aggcgatcat ttgcattttg gagttttggt
    75601 tcaaggggtt gaaacgcgtc ctgaacaatg gcaagataaa aaatggatag aaaataatat
    75661 ttacaatgtt ttaaatgatg gtaaaaagat aattttagga aaaaattaat gaaacaatta
    75721 actttagcaa aaactgtcaa aggcgtaggt ataggacttc ataagggtga acccatagaa
    75781 attactttag agcctttaga agcaaatagt ggtatagtat tttttagaag tgatcttaat
    75841 gcaagctata aggcaagtcc tgaaaatgtg atcaatactc aaatggcaac tgttttagga
    75901 gatgaaagag ggtttatttc tacaatagag catttaatga gtgcgattaa tgcttatgga
    75961 atcgataatg tacgcatagt tttaaatgca aatgaagctc ctgttatgga tggatcaagt
    76021 attagttttt gtatgatgct tgatgaagca ggggtaaaag aacttgatgc gcctaaaaaa
    76081 attatggtaa ttaaaaagcc tatagaagta agagatggta ataaatttgt gcgtttaact
    76141 cctactaaag aaccccgtat taattacaca attaaatttg acaatgctgt tataggtgaa
    76201 caaagttaca attttgaatt cagcaaaaaa aattatatag aaaacatagc aagagctaga
    76261 acttttggtt ttttaaaaga tgttcaagct cttaggagta tgaatttagc actaggtgga
    76321 agtttagaaa atactatagt ggtagatgaa aatcgtattt taaatcctga aggtttgcgt
    76381 ttcaaagatg agtttgtaag acataaaatt ttagatgcaa ttggagattt aaccttactt
    76441 ggatatcgtg tttttgggga ttatacttca tatgctggga gtcatcattt aaatcattta
    76501 cttactaaag aagttttaaa agataaagat gcttatgaaa ttgtaagcct tgaaaaaaca
    76561 acccaaaaag cttatgaaaa ggtatttgca taaaaacttc tcttttactt aatactttat
    76621 ctaagccttt aatgatcgga atttatcaag atgataaact tataaaaact tataaaagtg
    76681 aagaaaaagc aagcgaattt ttaccaaaaa ttttagatga attgcttaaa gagtatgatt
    76741 ttacaagttt aatctatgct aatggtccag gttcttatat ggggattaaa atttcttatg
    76801 taagtttgag tactttaagt atagtaaaaa atattccttt atttgcggtg agtgcttttg
    76861 aattaaatgg ctataaaccc ataagtgcaa ataaaaattt ttgttttgta tataaggaag
    76921 gtgaaatttg tttagagcaa aatatcccag cagagttttt tttaccaaaa aatttacaag
    76981 agcttaaact aaataatgat aatcttccct tttatttttt agatgcaatt taggatgaaa
    77041 tttgaaaatt ttagttccag ctacgagtgc gaatttaggg ccaggttttg attgtttagg
    77101 acttagttta aagcttttta atgaaactca aatccaaaaa tcaggtgttt ttagcattag
    77161 tattggaggc gagggaagtg ataatatttt tcttaaaaaa aacaatatat ttgtaaatat
    77221 tttttatgaa atttatgaaa aactaagcgg aaaaaaagat aattttcgtt ttatttttca
    77281 aaataacatt cctctttcaa gaggattagg aagctcttca gctgtgattg ttggagctat
    77341 tgccagtgct tattatatga gtggatttaa ggtagaaaaa gaacgtattt tagatgaagc
    77401 tttaatttat gaaaaccatc cagataatat cgctccagct actcttggtg gttttgtgtg
    77461 ttctttggtt gaaaaaaata aagtttatag tatcaaaaaa gagattgata aagatttagc
    77521 tgctgtggtt gtgatcccaa atttggcaat gagcacggaa caatcacgcc aagctttggc
    77581 caaaaattta agttttaatg atgcggtttt caacctttct catgcttcat ttttaaccgc
    77641 ttgttttttg gagaaaaaat atgaattttt aaaatttgca agtcaagata agctccatga
    77701 aatcaatcgt atgaaaaact tacccgagct ttttgaagtg caaaaatttg ccttagaaaa
    77761 taaagcttta atgagcacac tttcaggttc gggatcgagc tttttttctt tagcttttaa
    77821 agatgatgct ttagctttgg caaagaaaat acaaacaaaa tttaaagatt ttcgtgtgca
    77881 atatttagaa tttgatgata atggctttga aatttgctaa aaaatataaa aaaaagatat
    77941 aattttgaaa aaacatatac caattagaat gtgcatagtg tgtaaaaacc gctttgagca
    78001 aaatatgtta tttagattta aagttgtttt aggagatatt gtgcctaaag cagaacatgg
    78061 aagaagcgga tatttatgtc aaaattgtat tgagagagaa gataaagtct tacaaaaagc
    78121 attttctaaa atatgtaaaa atttaaatac taaaattact cagcaaggac ttaaggagat
    78181 atttttaaat ggcaaagatt agaattcatg aaatcgcaaa agaattaggt tatgatagta
    78241 aggaaattat tgaaaaggca aatgaattag gacttggaat taaaacagca tcaaatgctg
    78301 tagaacctga gattgcggca gctatttatg agtatataca aacaagagaa attccagaag
    78361 ctttcaagaa aaatatcaaa acccctacgg caaaaaagcc taaaaaagaa aatataaaag
    78421 aacaagaaaa gctaaatgaa tctgaaaaaa aagaacctaa aaaagaagaa aagcttaaac
    78481 aagaagttaa aaaagaagaa ttaaaaactg aaaaagaaaa tgcaaaagag gaagaaaaac
    78541 aagaaattat tgatactcat aagccacaaa gccttgctag tgcaacttta gccaaaagac
    78601 gcggacttgt tattgttaaa aagaaaaaag acgaagaaga aattcaagtt aaaaaagaag
    78661 aagtaaaaaa ttcaaatgat atatctatca ataatgaaga gcgcttaagt ttaaaaacta
    78721 tgttttcaaa tgctgatgag agtttaaaga aaaagaaaaa agaaaaaaaa tcttttgttg
    78781 caagtaaaaa agaaagtacc gaaaaaatga attttttaga tgaacatgat tttggtgata
    78841 tttctttaga tgatgaagat gaggtagtat tacctgattt tagtataaaa gaacaagaaa
    78901 aaccacaaaa tatcaataaa aaacaaccta attttataag acaagctgtt ggaaattctg
    78961 cgggttttgg gcttgaaggt ggaattcaaa gaagaagtcg taaaaaacca tctaaaaaga
    79021 ttgaaaaaaa ggaagtagaa gaagtaggta gcgttgctat ttctaaagaa attcgtgtgt
    79081 atgaattcgc tgataagata ggaaaaagca ctagtgaagt gatttcaaaa cttttcatgc
    79141 ttggaatgat gacaacaaaa aatgatttct tagatgaaga tgcgattgaa attttggctg
    79201 ctgaatttgg tatagagatc aatatcatta acgaggctga tgagtttgat tatgtaaaag
    79261 actatgaaga agagactgat gaaaaagatt tagtgactag agcacctgtg attaccatca
    79321 tggggcatgt tgatcatggt aaaacttctt tgttagatta tattagaaaa tcacgcgttg
    79381 caagtggtga agcagggggt attactcagc acgtgggtgc ttatatggta gaaaaaaatg
    79441 gacgtaaaat tacttttatt gatactccag gtcacgaagc ttttactgct atgcgtgcaa
    79501 ggggtgcaag tatcactgat attgtaatca tcgttgtagc cgcagatgat ggggtaaaac
    79561 cacaaactaa agaagcgata aatcatgcta aagcagcagg tgtgcctatt attattgcta
    79621 ttaataaaat ggataaagaa gcagcaaatc ctgatatggt aaaaactcaa ctcgcagaaa
    79681 tggaaatcat gccagtagaa tggggcggat cttatgaatt tgtaggagtt tcggctaaaa
    79741 caggaatggg gattgaagat ttacttgaaa ttgtgctttt acaagctgat attttagaac
    79801 ttaaagccaa tccaaaaagt tttgctaaag caagcattat agaaagttct gtgcaaaaag
    79861 ggcgtggtgc ggtagctact atcatcgtgc aaaatggaac acttactgta ggaagtactg
    79921 tggttgcagg cgaggcttat ggaaaagtac gtgcgatgag tgatgatcaa ggtaaagcct
    79981 taaaagaaat caaaccaggc gaatgtgggg ttatcgtagg acttagtgaa gtggctgatg
    80041 cgggtgaaat tttaatcgca gtaaagagtg ataaagaagc aagagaatac gctaataaac
    80101 gccacgaata caaccgccaa aaagaactta gcaaatctac taaagttagc attgatgagc
    80161 ttggagctaa gatcaaagaa ggcaatctaa aagccttgcc tgttatttta aaagctgatg
    80221 tgcaaggatc tttagaagcc ttaaaagcaa gtttagaaaa acttagaaat gatgagatta
    80281 aagtgaatat cattcatagt ggggtaggag gaatcacgca aagtgatata gagcttgcaa
    80341 gtgcgagtga aaactctata gtactaggtt ttaacatacg cccaacaggg gaagttaaag
    80401 agcgtgctaa agataaaggc gtagaaatta aaacctataa tgtgatttat aatcttttag
    80461 atgatgtaaa agccttgctt ggtggtatga tgagcccgat tatttctgaa gagcaattag
    80521 gacaagcaga gattagacaa gtgatcaatg taccaaaaat cggacaaatt gcaggttgta
    80581 tggtaaccga aggggtgatt aaccgtgggg ctaaaattcg ccttatccgt gatggagttg
    80641 tggtttatga gggaaatgta agctcactta aacgctttaa agatgatgct aaagaagtgg
    80701 caaaaggcta tgaatgtggc gtaggtatag aagggtgcga tgatatgaga gtgggtgatt
    80761 atatagaaag ctataaagaa gtagaggaac aagcaagtct atgaacccaa gtgagattaa
    80821 aaaactacgc actgaaagta tcttaaaaga gctgatccct gaagctttag caaatttaga
    80881 tgatgaaaat ttgaaaaatt tgtgtgtagt ggatgtagag tgtaaaaaag gcagatatga
    80941 tgcttttgtg tatcttgata agatgttttt taatgttcat gagcaagaaa aaattttatc
    81001 ttctttaaaa aaggcaagta gagctttgca aaattactgc atgagtgagc agggttggta
    81061 taggtgtccg aattttcatt ttaaatttga tgataggctt gagtatcaaa accatatgga
    81121 tgcacttttt gaaaaaataa aaaaggataa aaatgaatct tgaagccctt tgcaaagaag
    81181 tgaatttaga gctttatgat agcgaattaa ctagcgaaaa tggcaagaaa atttaccgcg
    81241 tttatgtgat gaagccctta gatgaaaagg gtgaaagaag gggtgtaaat ttggatgatt
    81301 gtgcaaggct tagtgaaatt ttatcaccta ttttcgatgt ggaaccacct gtaagtggcg
    81361 agtatttttt agaagtatct tcagcaggac ttgagagaaa acttagcaag atagagcatt
    81421 ttgcaaaaag tatcaatgag cttgtaaaaa tcacaacagg tgaaaaagaa aaaatcgaag
    81481 caaaaatcat cagcgtagag gatgaaaata tcactttaga aaatttagaa aataaagaaa
    81541 aaactactat aaattttaat gatataaaaa aagctagaac cttcatacaa tggtaaaaat
    81601 ttagattttt aatttttacc tatcttttat ataattaaaa ttaaacacaa aaattcaaaa
    81661 ggcatacaat gctagaagat aaatacgatt ggaaaataag taaggcagat caaaatggta
    81721 atgtgtatta ttattttcca aaagatgaag atgaatttaa agaagcagtt gtaaaaaatg
    81781 gcggtatgag tgtgtatgtt tatcaagaag gtaaatttat agatgaattt cacacaaaaa
    81841 gtcaaggtga taaatggact tcttctattc ttaattattt aaaaactatg agtaaagatg
    81901 gagaaatatt ttatagatat tataaaaatt gcaaattttt tgctatacca aaaaatacat
    81961 tttctaaaga tgattttaaa attataaagg ataatataaa taataatata tccttaaacc
    82021 aaattcttta tgggtctcca gggacaggaa aaacttatca tactatagat aaggctttgg
    82081 aaatcttggg tgaaaattta gaaagtagag atgagaaaaa agctaaattt gatgagtatg
    82141 taaaaaatgg acaaatagta tttactactt ttcatcaaag ctacggatat gaagaatttg
    82201 tagaaggtat aaagcctagt ttaaatagtg atgaaaattc gcaaattaat tataaggtta
    82261 aagatggaat ttttaaagag ctttgcaaga aagctttgga gaatagagat gacatagaaa
    82321 gttttaattt ttatataaat gacttgaaag aaaaaacaaa agaagatgcc aataatcctg
    82381 aaaaatattt tcaattgcca aatacaaaat attctattca atatagaggt ggaaaaacat
    82441 ttagaattaa atttgatgat atgagcaaaa atcataaaga ctatccagta agtatagata
    82501 atatagaaaa attatataaa acttctaata tagatgaaat atataattca gcatatgtta
    82561 aagctatctt aaactatttg aaatcacaag gtttaaaaga ttataaagaa aaagatgaaa
    82621 aaataaattt accttatata atcattatag atgaaatcaa tcgtggtaat gtaagtaaga
    82681 tttttggtga gcttataacc ttgatagagc ctagtaagag attaggaaat gaagaagcat
    82741 tagaattaac tttgccttat agtggtgaaa aattcggagt gcctaaaaat gtttatatca
    82801 taggcactat gaatacagcc gatagaagca taacttctct tgatacagct ttaagaagaa
    82861 gatttgaatt tgttgagatg atgcctaatt ctgatttact taataatgtt tttatttgta
    82921 aagatgtaga aaatccaaat gaagacgaag attatttagg agatgatgct aaaacagagg
    82981 gttatgcaga gatacttcaa aatattttaa taagtataaa taaaagaatt gaatttttat
    83041 tagatagaga aaaaactata gggcatgcat tttttatgag tgaagctgtt aaatttaata
    83101 aaaataattg gattaagcca gatgaatatg aagaagattg gtatgtttta agtatctcaa
    83161 agttaaaaaa agtttttcaa aacaaaatta tcccgctttt gcaagagtat ttttataatg
    83221 attatgcttt gattaatgcg gttttaaatg ataatggtat gatttttgaa gataaaaaag
    83281 acgataaata tcttcaaaaa ataaaaaatc tagatagtgt taatagcgag agaagtattt
    83341 ataatattgc ttcatttgat gataaaattt gggataaaat agaaatatat caagcaattt
    83401 ataatgatga aatagcaaat aaattaaaaa acgaaaatga atagtatttt ttccatcatc
    83461 gaataccaag ctttttctaa agaagattta aaagaaattt tcaaagaaaa ggccgaaggg
    83521 ttttataaag agctagaaga ctttgcaaaa aataatgaaa atcttctagg ctttaaaaac
    83581 aaaaattcct taaaagctaa aaattatgtc ggcattatac agactaaaag cggggttttg
    83641 gagattttgc caaaatgcac gaatttagat agttataaaa aagaagatag ttcttcaaat
    83701 catgacaaag aaaaactaag aagatgttat gaattagaca atatttctaa aaataatgat
    83761 ttttatgaaa aagattttaa atttaatcct aaaaatcttt tgataaatat gctaaaaacc
    83821 ttaaaaaact ccccctttaa aaaatcgcaa atttcatctt tgcaaagttc taaaattcct
    83881 ttatttgaag tgtttatcac tatgttttta gatgaatttg atagcgtata taaaaaaggc
    83941 ttgatgagat cttatctaag ttgcgaagaa aatagggctt ttttaaaggg aaaattacta
    84001 tttaacgagc atatcaagcg aaatttgata cacaaagaaa gattttttac aagcaatgat
    84061 gagtttgttt tagatatagc acccaatcgt ttgataaaat caacgctaaa ttttttaaaa
    84121 tcaaaaacaa gtttgaataa atttagactt ataaaatcta tgcaaattct cgatgaggta
    84181 gaattttcta aaaattatga aaaagatttt agttataaaa tttcaagaca ttttgattat
    84241 tatgaaaact tgcttttgtg gtgtaaaatt ttcttaaaaa atgaaagttt tatgccttat
    84301 catggtaaaa atgaagcttt tgctttgctt tttcctatgg agaaaatttt tgaagattat
    84361 gtagcttata tgctaaaaaa agtaaatcca gctcaagata ttaaagttca aaacaatgga
    84421 aagtatttaa tctcaaaaaa tgatgaaaat tgtttcatgt taaagcctga tttatatata
    84481 gaaaataaaa tgatcctaga taccaaatgg aaaattccaa atgatagtga agatgagaaa
    84541 aaacagggta tagaacaaag cgatttgtat caaatgtttg cttatgcttg caaatttaaa
    84601 atttatgata ttaaacttgt gtatccttta tgtgaaaaaa ctcaagattt acaaagaaaa
    84661 atcgcagaaa aattttttgt ttttaaggca agcgaacatt tgtattttaa agaacaaggg
    84721 caaaaagata taaaagtgca agtgtgtttt gcacctttac ctttttaaaa atttgcctat
    84781 caaatgcatt aaaaaaccaa aacaagctac agctatgata caagcaccgc ttgagaggtt
    84841 aagataatag ctaagtataa gtcctaaaac acaaaaaatc atacttaaaa aacttgctaa
    84901 aaccatgata aagccaagtt ttttggtgaa attttcagca ataaagcttg ggatgctaag
    84961 taaagccata accaaaataa gccctacaag gcgtatagaa ataactatac aaaaagccat
    85021 aagggcgatt aaaagataat gaaaaaaact tgtattgata ccacgaactt ttgcaaattc
    85081 cgcatcaaag cttaatgctt caaattgtct ataaaataaa aagatcaaaa gcaccaccac
    85141 gctatcaacc aaagccataa gccataaatc ttgcgtccct acagctaaaa tgctcccaaa
    85201 aagataagcc attaaatctg tgttataact agggcttaaa tcgattaaaa taatcccaac
    85261 agccattcca aaagcccaga ttacagcgat aatactatca cttctgtgtt catagcgttt
    85321 agctaaaaaa gctactaaaa aagccaaaaa taaagtaaat attcccgtgc ttaataaaat
    85381 aggcaaagag aaataaaaag ctatacctat accaccaaaa gccccatgtg ttatacctcc
    85441 agccatagaa aaaaggcgat ttatcatcac caaagtacct atgatcccac aagctatact
    85501 gactaaaatc gctcctagta aagcgttttg aaaaaaggtg aaatttaaaa tttcaagcat
    85561 tattttcctt tgaaaatttt aaacaaaaat tttctttttt aaattctgtt tttttcaaat
    85621 ttcttcttgt aaattcttgt tcgcatagtt ttttgctatc gcaatttttt tcatcgcaaa
    85681 aacaagtatt taaactcatt tctacatcac aaaaatgaga gtgattttcg tataaatgtt
    85741 ttaaaaatga acttttttct ttttctttag tgttagtatg caagaaaagt tctttgttta
    85801 aatgtgcaat tttatcgcta taagctaata caaggttgat atcgtgacaa atgagtaaaa
    85861 ttcccatgcc tttttggtgc aaagagctta gaagttcaaa aatttgtata gcagacttgt
    85921 tatcaacgct tgcggtaggt tcatctaaaa taagcatctt acattcacta gctaaggctc
    85981 ttgcgataaa aacacgttgt ctttgtcctc cgcttaaaga atcaatggtt ttgttccaaa
    86041 atttttccat tcctacactt tttaaagctt gcatagcttt ttctttatct tttttcccat
    86101 aaaaaccaaa aattttttta cttacaagtc ccataagaac gatttcaagt actcttgggc
    86161 aaaaattagg attggctaga gtgtgttgag gaacatagcc tatttctttt ctttgaagag
    86221 ctttgaaatg gatttcattt ttggatttta aaagtcctaa gataagtttt acgagtgttg
    86281 attttcctgc gccatttgga cctatgatag agagaaagtc tttattgtca tagctaagat
    86341 tgatgttttt taagatgatt tcattatcat aagcgtagtt tagattagaa atttcaaaaa
    86401 aaagcatcaa aaaacctgat tataaattat gagaaaaggc atcagcagtt tttaaaagct
    86461 cattttccca atcataagat aaatgatcta ttttgtaaat ttttgcatca cattctttag
    86521 caagtgtttt tgctgcattt tcagggaaac cattttgaac aaaaatgact tttaaatttt
    86581 tatctttcat tagagtgata agtttttgca aatctttgct ttttggttcc ttacctaaaa
    86641 tttctacagg aatttgcgta agattatagc gttttgcaaa atatgtccaa gaaggatgat
    86701 aaactacaaa ttctctattt tttaattttt ctaattttga ggcaatttgt aaatttaaac
    86761 tatctaattc tgcta
//
LOCUS       DAPIVO010000002        49763 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.002, whole genome shotgun sequence.
ACCESSION   DAPIVO010000002 DAPIVO010000000
VERSION     DAPIVO010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 49763)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 49763)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..49763
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.002"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..564)
                     /locus_tag="RJ239_000115"
     CDS             complement(<1..564)
                     /locus_tag="RJ239_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HDV7330281.1"
                     /translation="MQKIFDAHLHLWDLEKIPISWIKDDEKLEQNYDFFRMKQEYKEF
                     EFIGAMYVEVNSDDLEKEALFALEQKKLHNLLFCLADFKHKEELSSFREVMHTSKKGA
                     KRLFEADFEEKIEILKTFNIPFEACIKNEELGFLEKFLSKNPNLKVVLNHLGSPKINR
                     LNEYKKDLSFLKKFQNLYIKLSIPDGFS"
     gene            complement(548..1804)
                     /gene="fucP"
                     /locus_tag="RJ239_000116"
     CDS             complement(548..1804)
                     /gene="fucP"
                     /locus_tag="RJ239_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose:H+ symporter permease"
                     /protein_id="HDV7330282.1"
                     /translation="MTDSKNIKIAIVLVTSLFFLWGVSYGLIDVMNKNFQNHLHISQH
                     ESGFLQFAYFGAYFIIALPAGYIANRFSYKMGIIFGLALYAIGALLIIPATNLASFHL
                     FLFAFFILACGIGSLETSANPYMTKLGDEKNASFRINAAQSFNGLGQFVGPIIGGVLF
                     LSITKQEEGASKEQIEAALVANMGNVQLVYIGIAVIVILILIAFVANKLPEGSAVSDD
                     YKQKDDSKPIYVFKHRHFNLGLLAQFLYIANQVAAGAFFINYVVEHNEGLKDAQGAYY
                     FSIALVAFMLGRIVSTPLMKIIKGEKILGFYSLINVLICFSLYFASGFFSIVLLIALF
                     FFMSISFPTIFAVATKNLPLNQVKLGGSLLVMSIVGGAIMPIIIGFINDHYGTGAGYL
                     AMAPLFLYVAWYGFIGSKVRKNAKDF"
     gene            complement(1815..2603)
                     /locus_tag="RJ239_000117"
     CDS             complement(1815..2603)
                     /locus_tag="RJ239_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDV7330283.1"
                     /translation="MDLKIKNKVCIITGGAKGIGYGIAKLWASEGGIPVIFSRSMPKE
                     HDKELKKLSSEYEFYEIDLKNYEQIEKLVKKVAIKHGGIYALVNNAGTNDNLHIENTS
                     TQDLIKSYENNLFHYYTMTKECLPYIKKEQGSILNIVSKTGITGQGRTSAYASAKAAQ
                     MGFTREWACAFAKDNVRVNAIAPAEVMTPLYEKWLQNFPNPKEQYEKIAKAIPLGHRF
                     TTIEEIANTAVFTLSPLASHTTGQILMPDGGYVHLDRALNWDEN"
     gene            complement(2604..3890)
                     /locus_tag="RJ239_000118"
     CDS             complement(2604..3890)
                     /locus_tag="RJ239_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004314306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7330284.1"
                     /translation="MKHANSIKLELVCKKISWRILPLIVLMFCLSMLDRTNISFVKSH
                     IEIDAGIGEAAYALGAGIFFIGYAIFEVPSNLFLHKLGAKIWLSRIMITWGLVTMAMI
                     FIQGEISFYVLRFLLGLTEAGFSPGIILYLSYFFPAIYRSKVYGIYQMGVPIAFVFGS
                     LISGFILDYTPNIYFKNWQWMFLIEGGITVLVGIFCLFYLDSHPKDAKWLDIKEKDIL
                     LKHIEISNTKAKDYSIKDIFKSILVWKFVFVYFCIQLSVYGVLFYLPSKIAQILQINV
                     GFEVGLLNAIPWIFVFIALPIFTSLADKKHSWNLHAILFLLLASLSMIASTFVTNLAA
                     FLFFISLAAIGFIVIQPIFWNLPTQVLKGKGAAAAIALIGSLGNLGGFVAPTLKTYIE
                     NHFGVEFGLIVLALIAILGVLVLIHLKITLNLDKGE"
     gene            complement(3902..5068)
                     /locus_tag="RJ239_000119"
     CDS             complement(3902..5068)
                     /locus_tag="RJ239_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UxaA family hydrolase"
                     /protein_id="HDV7330285.1"
                     /translation="MKKIMGYRREDGKFGLRNKVIIIPSVHCANKVCENIARKCNGAV
                     YINHQHGCSQLEFDALQTRDVLIGHGSNANVFGVLIIGLGCEVIQAKAVAEKIKEATP
                     YKKVEYLVIQECGGSKNTIENGIKIVNEMLESAAKLQKSEGDFSDLILGTECGGSDSY
                     SGLSANPALGSLSDFVIDEGGAVILAETTELIGCEAILAKRAKNDEIAKKVYDKILAY
                     ENLVKSFHADIRGANPSPGNMAGGLSTIEEKSLGCVYKAGTRTLMDVIDYAKPVVSKG
                     LTFMNTPGNDIEQLSAMVAGGANICVFTTGRGTPTGSAIVPTIKMSSNTFCYENMNDA
                     IDINAGSIIDGVKTKEEVRDELIELIVRISDGELVKAELNEQNDFSVWRLATTC"
     gene            complement(5071..5334)
                     /locus_tag="RJ239_000120"
     CDS             complement(5071..5334)
                     /locus_tag="RJ239_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002901625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UxaA family hydrolase"
                     /protein_id="HDV7330286.1"
                     /translation="MKGYIIVNEKDNIATALRDFKKGEKVANIELLNDIASGHKFALK
                     DIKKDEIIIKYAEAIASASCDISTGEWVHIHNTAGIRGRGDKE"
     gene            complement(5331..6239)
                     /locus_tag="RJ239_000121"
     CDS             complement(5331..6239)
                     /locus_tag="RJ239_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HDV7330287.1"
                     /translation="MGILKGTLPALLTPYKDDGSINEKEFIRYCEFGISKGLNGLFCN
                     GSAGDSQALSVEEQVKLMKLTKKATKNNIPIITGITSTIYENTFILAQKAYELGLDAL
                     LLAMPYYYKLSEDALFEYVKYLASEVKLPLYVYNIPLFAPALSLKFIEKVSKLDNVVG
                     IKDSSGDALLLNHILDVVPSNFDVFVGREEFYVGALLAGVKGSMTSIGGVFPELMSEI
                     YKSINEKNIGRALLIQKSLLKAIRFGMSIAFPMGFALLLKARGFEFVNASIHPLSPAT
                     KEELNTRFDEAKELIKTIEKETGIKL"
     gene            6470..7231
                     /locus_tag="RJ239_000122"
     CDS             6470..7231
                     /locus_tag="RJ239_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HDV7330288.1"
                     /translation="MHQPTLRVLNILELLAKEKLTLSAIAKKLNIPAGTLWPILQTLQ
                     EKKYIKCDLKNKSYYLDFKIIELGCNIKNENNIFEIIKKHMKNIRNLTNQTCQMGILK
                     DGNVLYLEKIDANNTVQLKSFIGTSYPAYATSLGKALLSNKNKKELEKLYPKNFDKIT
                     ENTLNNINELYQQIKQIKKEKIAIEIGEMNPQIECMAIGIEHKNKIIAAISISYLIYC
                     SNKAFREKNKKILLEEKNKIEKVLKIYFNDLDTLY"
     gene            complement(7262..11815)
                     /gene="rpoC"
                     /locus_tag="RJ239_000123"
     CDS             complement(7262..11815)
                     /gene="rpoC"
                     /locus_tag="RJ239_000123"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HDV7330289.1"
                     /translation="MSKFKVIEIKEDARPRDFEAFQLRLASPEKIKSWSYGEVKKPET
                     INYRTLKPERDGLFCAKIFGPIRDYECLCGKYKKMRFKGVKCEKCGVEVANSKVRRSR
                     MGHIELVTPVAHIWYVNSLPSRIGTLLGVKMKDLERVLYYEAYIVENPGDAFYDNEST
                     KKVEYCDVLNEEQYQNLMQRYENSGFKARMGGEVVRDLLANLDLVALLNQLKEEMGAT
                     NSEAKKKTIIKRLKVVENFLNSNLNANTDSDEAVPNRPEWMMITNLPVLPPDLRPLVA
                     LDGGKFAVSDVNDLYRRVINRNTRLKKLMELDAPEIIIRNEKRMLQEAVDALFDNGRR
                     ANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPK
                     KMALELFKPHLLAKLEEKGYATTVKQAKKMIENKTNEVWECLEEVVKGHPVMLNRAPT
                     LHKLSIQAFHPVLVEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSQEAIAECKVLMLS
                     SMNILLPASGKSVTVPSQDMVLGIYYLSLEKAGAKGSHKICTGIDEVMMALESKCLDI
                     HASIQTMVDGRKITTTAGRLIVKSILPDFVPENSWNKVLKKKDIAALVDYVYKQGGLE
                     ITASFLDRLKNLGFEYATKAGISISIADIIVPNDKQKAIDEAKKQVREIQNSYNLGLI
                     TSGERYNKIIDIWKSTNNVLSKEMMKLVEKDKEGFNSIYMMADSGARGSAAQISQLAA
                     MRGLMTKPDGSIIETPIISNFREGLNVLEYFISTHGARKGLADTALKTANAGYLTRKL
                     IDVAQNVKITIEDCGTHEGVEINEITADSSIIETLEERILGRVLAEDVIDPITNSVLF
                     AEGTLMDEEKAKILGESGIKSVNIRTPITCKAKKGICAKCYGINLGEGKLVKPGEAVG
                     IISAQSIGEPGTQLTLRTFHSGGTASTDLQDRQVSAQKEGFIRFYNLKTYKNKEGKNI
                     VANRRNAAVLLVEPKIKTPFKGVINIENIHEDVIVSIKDKKQEVKYILRKYDLAKPNE
                     LAGVSGSIDGKLYLPYQSGMQVEENESIVEVIKEGWNVPNRIPFASEILVEDGEPVVQ
                     NIKAGEKGTLKFYILKGDGLDRVKNVKKGDIVKEKGFFVVIADENDREAKRHYIPRES
                     KIEFNDSEKIDDANTIIASAPKKERKVIAEWDAYNNTIIAEIDGVVSFEDIEAGYSAD
                     EQIDEATGKRSLVINEYLPSGVRPTLVIAGKGDKAVRYHLEPKTVIFVHDGDKIAQAD
                     ILAKTPKAAAKSKDITGGLPRVSELFEARKPKNAAVIAEIDGVVRFDKPLRSKERIII
                     QAEDGTSAEYLIDKSKHIQVRDGEFIHAGEKLTDGVVSSHDVLKILGEKALHYYLISE
                     IQQVYRGQGVVISDKHIEVIVSQMLRQVKVVDSGHTKFIEGDLVSRRKFREENERIIR
                     MGGEPAIAEPVLLGVTRAAIGSDSVISAASFQETTKVLTEASIAGKFDYLEDLKENVI
                     LGRMIPVGTGLYGEQNLKLKEQE"
     gene            complement(11808..15944)
                     /gene="rpoB"
                     /locus_tag="RJ239_000124"
     CDS             complement(11808..15944)
                     /gene="rpoB"
                     /locus_tag="RJ239_000124"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HDV7330290.1"
                     /translation="MCDMLDNKLGNRLRVDFSNISKQIEIPNLLQLQKKSFDYFLNLD
                     NGESGIEKVFKSIFPIHDPQNRLSLEYVSSEIGKPKYTIRECMERGLTYSVNLKMKIR
                     LTLHEKDEKTGEKVGVKDIKEQEIYIREIPLMTDRVSFIINGVERVVVNQLHRSPGVI
                     FKEEESSTVANKLVYTAQIIPDRGSWLYFEYDAKDVLYVRINKRRKVPVTMLFRALGY
                     KKQDIIKLFYPIQTIHVKKDKFLTEFNPNDFMDRIEYDIKDEKGKIVHQAGKRLTKKK
                     AEQLIKDGLKWIEYPVEILLNRYLANPIIDKESGEVLFDSLTLLDESKLAKIKEQKSF
                     DIANDLANGVDAAIINSFAQDGETLKLLKQSENIDDENDLAAIRIYKVMRPGEPVVKD
                     AAKAFVNDLFFNPERYDLTKVGRMKMNHKLGLEVPEYVTVLTNEDIIKTAKYLIKVKN
                     GKGHIDDRDHLGNRRIRSIGELLANELHLGLAKMQKAIRDKFTSLNADLDKVMPYDLI
                     NPKMITTTIIEFFTGGQLSQFMDQTNPLSEVTHKRRLSALGEGGLVKERAGFEVRDVH
                     ATHYGRICPVETPEGQNIGLINTLSTYAKVNELGFVEAPYRKVVNGKVTNEVVYLTAT
                     QEEGLFIAPASTKVDAKGNIVEEFVEARQDGETILARREEVQLIDLCSGMVVGVAASL
                     IPFLEHDDANRALMGSNMQRQAVPLLTASAPIVGTGMEQIIARDAWEAVKAKRGGVVE
                     KVDNKSIFILGEDDKGPFIDHYTMEKNLRTNQNTNYIQHPIVKKGDIVKAGQIIADGP
                     SMDQGELAIGKNALIAFMPWNGYNYEDAIVVSERIIREDTFTSVHIYEKEIEARELKD
                     GIEEITKDIPNVKEEDVAHLEESGIAKIGTHIKPGMILVGKVSPKGEVKPTPEERLLR
                     AIFGEKAGHVVNKSLYATASLEGVVVDVKIFTKKGYEKDDRAIKSYDKEKMALEKEHH
                     DRLLMMDREEMLRVCALLSKASLNSDQKIGDKNYKKGQTADISELEKINRFTLTTLIK
                     AYSKEIQKEYDDLKNHFQNEKKKLKAEHDEKLEILEKDDILPSGVIKLVKVYIATKRK
                     LKVGDKMAGRHGNKGIVSTIVPEVDMPYLPNGKSVDIALNPLGVPSRMNIGQILESHL
                     GLVGLRLGDQIQEIFDRKQKDFLKELRAKILEICSIPRLANEKEFIKSLSDEELLNYA
                     RDWSKGVKFSTPVFEGVNIEEFSKLFKMAKIDMDGKTELYDGRTGEKIAERVHVGCMY
                     MLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGAAHTLRE
                     MLTIKSDDVEGRFSAYKALTKGENVPATGIPETFFVLTNELKSLALDVEIFDKDEDNE
                     "
     gene            complement(16053..16430)
                     /gene="rplL"
                     /locus_tag="RJ239_000125"
     CDS             complement(16053..16430)
                     /gene="rplL"
                     /locus_tag="RJ239_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HDV7330291.1"
                     /translation="MAISKEDVLEYISNLSVLELSELVKEFEEKFGVSAAPVMVAGGA
                     VAGGAVAAAEEKTEFDIVLTDGGAKKIEVIKIVRALTGLGLKEAKDAVEQTPSTLKEG
                     VAKAEAEEAKKQLEEAGAKVELK"
     gene            complement(16451..16930)
                     /locus_tag="RJ239_000126"
     CDS             complement(16451..16930)
                     /locus_tag="RJ239_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HDV7330292.1"
                     /translation="MTRSEKVEIIAKLEEGFKASEAIVVCNYRGLSTKKLEELRNNAR
                     ENNVKVQIVKNTLANIALNNSGKTGLVLKDTNIYLWGEDQLSVSKVAAKFEENNDKFE
                     IKTAHIEGEVADVAKVKALAKMPSRNELLAMLLQVWNAPITNFTIGLNALKNKKESE"
     gene            complement(17082..17783)
                     /locus_tag="RJ239_000127"
     CDS             complement(17082..17783)
                     /locus_tag="RJ239_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HDV7330293.1"
                     /translation="MAKIAKRLKELSQKIDSNKEYALSDAIDTIKTLKSAKFDETVEI
                     ALKLNVDPRHADQMVRGSVVLPAGTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLVE
                     EIQKGNMNFDVLIATPNLMGLVGKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQ
                     VNFRVDKQGNIHAGLGKVSFSKEQLWDNVSTFVKAINKHKPAAAKGRYIKNAALSLTM
                     SPSVKLETQELLDMK"
     gene            complement(17838..18263)
                     /gene="rplK"
                     /locus_tag="RJ239_000128"
     CDS             complement(17838..18263)
                     /gene="rplK"
                     /locus_tag="RJ239_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HDV7330294.1"
                     /translation="MAKKVVGEIKLQIAATKANPSPPVGPALGQQGVNIMEFCKAFNE
                     RTKDMAGFNIPVVITVYADKSFTFITKQPPATDLIKKAAGISKGTDNPLKNKVGKLTR
                     AQVLEIVDKKIADLNTKDRDQAAKIIAGSARSMGVEIVD"
     gene            complement(18289..18822)
                     /gene="nusG"
                     /locus_tag="RJ239_000129"
     CDS             complement(18289..18822)
                     /gene="nusG"
                     /locus_tag="RJ239_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HDV7330295.1"
                     /translation="MSTHKWYAIQTYAGSEMAVKRAIENLVKDNGIEEQLKEIVVPTE
                     DVIEFKNGKEKISERSLYSGYVFALLDLNTELWHRIQSLPKVGRFIGESKKPTPLTEK
                     DINLILEKVHNRAAPKPKISFEEGENVRITEGPFANFTAIVEEYDMVRGLLKLNVSIF
                     GRSTPVEILYSQVEKII"
     gene            complement(18832..19011)
                     /gene="secE"
                     /locus_tag="RJ239_000130"
     CDS             complement(18832..19011)
                     /gene="secE"
                     /locus_tag="RJ239_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HDV7330296.1"
                     /translation="MEKLITYFKLSKAELRKVIFPLKEQVRNAYITVFVVVAVISLFL
                     ALVDWLMSSIVSAIV"
     gene            complement(19030..19105)
                     /locus_tag="RJ239_000131"
     tRNA            complement(19030..19105)
                     /locus_tag="RJ239_000131"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(19070..19072),aa:Trp,seq:cca)
     gene            complement(19118..19276)
                     /gene="rpmG"
                     /locus_tag="RJ239_000132"
     CDS             complement(19118..19276)
                     /gene="rpmG"
                     /locus_tag="RJ239_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDV7330297.1"
                     /translation="MRIKVGLKCEECGDINYSTYKNSKNTTEKLELKKYCPRLKKHTL
                     HKEVKLKS"
     gene            complement(19329..20528)
                     /gene="tuf"
                     /locus_tag="RJ239_000133"
     CDS             complement(19329..20528)
                     /gene="tuf"
                     /locus_tag="RJ239_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDV7330298.1"
                     /translation="MAKEKFSRNKPHVNIGTIGHVDHGKTTLTAAISAVLSRRGLAEL
                     KDYDNIDNAPEEKERGITIATSHIEYETDNRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKADMVDDAELLELVEMEIRELLSS
                     YDFPGDDTPIISGSALKALEEAKAGQDGEWSAKIMDLMAAVDSYIPTPTRDTEKDFLM
                     PIEDVFSISGRGTVVTGRIEKGVVKVGDTIEIVGIKDTQTTTVTGVEMFRKEMDQGEA
                     GDNVGVLLRGTKKEEVIRGMVLAKPKSITPHTDFEAEVYILNKDEGGRHTPFFNNYRP
                     QFYVRTTDVTGSIKLADGVEMVMPGENVRITVSLIAPVALEEGTRFAIREGGKTVGSG
                     VVSKIIK"
     gene            complement(20597..20671)
                     /locus_tag="RJ239_000134"
     tRNA            complement(20597..20671)
                     /locus_tag="RJ239_000134"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(20637..20639),aa:Thr,seq:ggt)
     gene            complement(20776..20852)
                     /locus_tag="RJ239_000135"
     tRNA            complement(20776..20852)
                     /locus_tag="RJ239_000135"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(20816..20818),aa:Gly,seq:tcc)
     gene            complement(20859..20944)
                     /locus_tag="RJ239_000136"
     tRNA            complement(20859..20944)
                     /locus_tag="RJ239_000136"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(20908..20910),aa:Tyr,seq:gta)
     gene            complement(20994..21069)
                     /locus_tag="RJ239_000137"
     tRNA            complement(20994..21069)
                     /locus_tag="RJ239_000137"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(21034..21036),aa:Thr,seq:tgt)
     gene            complement(21161..21922)
                     /locus_tag="RJ239_000138"
     CDS             complement(21161..21922)
                     /locus_tag="RJ239_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDV7330299.1"
                     /translation="MSILKIENLQKYYGSHHALKDINLEVKAKEVVVILGPSGCGKST
                     LLRCINGLEEIASGNIYIDNEKIDKDFKEWPRMRQKVGMVFQSYELFEHLSVEENILL
                     GPMKVQKRKKDEVLKEAKIWLEKVGLLHKIHAYPRELSGGQKQRIAIVRSLCMNPELM
                     LFDEVTAALDPEIVREVLEVMLNLAKEGMTMLIVTHEMGFAKAVADKIIFMDEGKIIE
                     ENDPKSFFKNPKSERAKKFLNLFDYHNIDKNNIGL"
     gene            complement(21924..22580)
                     /locus_tag="RJ239_000139"
     CDS             complement(21924..22580)
                     /locus_tag="RJ239_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDV7330300.1"
                     /translation="MLELLNTDTLLRLWQGLFVTLEISFISIIITSIGGLFLGILMSF
                     KNTYIYAFCRLGLEFVRVMPLLVWLFVVYFGFPRWFGWDLSSVSAAIIVFSIWGCFEM
                     MDLVRVSLQSIPKHQYESASSLGLNTVQSFAYVIIPQAMRRLTPMSMNLLTRMIKSTT
                     FAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSRKLEKKWS
                     "
     gene            complement(22573..23274)
                     /locus_tag="RJ239_000140"
     CDS             complement(22573..23274)
                     /locus_tag="RJ239_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDV7330301.1"
                     /translation="MDFDFILAQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYF
                     KIKILENICKLYIEFSRNTPLLIQLFFLYYALPKFNIHLEQIPPLDLICLSVEETLRP
                     SFACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSLGFSKFGNLRYVILPQALAI
                     SMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKTDELLFLLFMGYLCIILP
                     LSFILLKFEKRLLHA"
     gene            complement(23290..23886)
                     /gene="nssR"
                     /locus_tag="RJ239_000141"
     CDS             complement(23290..23886)
                     /gene="nssR"
                     /locus_tag="RJ239_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrosative stress-sensitive transcriptional
                     regulator NssR"
                     /protein_id="HDV7330302.1"
                     /translation="MKDYLELLSSVGKLKKFQKNSILFYEGEEAKNFFILLKGKIRIY
                     KSTASDKEITLHYFNPPNFIAEMPAFKKLNYPANAVFEEDGEILEIDFINFQNLCSEN
                     KEFNFLLISSLFDKIKILEKKLSQNALDLRTRLLKYLLENEKNLDTISQKQIAIDLNV
                     RAQSLSRVLKELKISELIDTKKGRIEILNKDMIMKELW"
     gene            23981..24364
                     /gene="ctb"
                     /locus_tag="RJ239_000142"
     CDS             23981..24364
                     /gene="ctb"
                     /locus_tag="RJ239_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="truncated hemoglobin Ctb"
                     /protein_id="HDV7330303.1"
                     /translation="MKFETINQESIAKLMEIFYEKVRKDKDLGPIFNNAIGTSDEEWK
                     EHKAKIGNFWAGMLLGEGDYNGQPLKKHLDLPPFPQEFFEIWLKLFEESLNIVYNEEM
                     KNVILQRAQMIASHFQNMLYKYGGH"
     gene            complement(24361..26184)
                     /gene="recG"
                     /locus_tag="RJ239_000143"
     CDS             complement(24361..26184)
                     /gene="recG"
                     /locus_tag="RJ239_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HDV7330304.1"
                     /translation="MKIKESDFEFFKKLKIRSAIDLALLLPKKIENLNPSKNPKENEI
                     CTQKITIKSVSSRKNQLFGLGFCEEWQENISFVFFHPRAWHFGICKVGKELIFNAKLS
                     HFNHTWQFNNPKILTSFEGFSPKYQILGLKDTKIAAFIHKYLNYENLKESGIEDKYIH
                     FLLNLHAYDEKSFFMFENLQNFSKDLKYIEIYNFLKRLKAKKTHFKAHQINVFNIANW
                     LKDLPFSLTKDQLNALKDIEKDLHSKEAKRRVIMGDVGCGKTLVLLGAALMVYPKQAI
                     LMAPTSILAYQLYEEAKKFLPDFMNILFIKGGKKEKDLEQNIQKANLVIGTHALIHLE
                     SHNAVLVMIDEQHRFGSAQREKIHSLNKQEFAPHFIQFSATPIPRTLSMIQSELLNFS
                     FIKQMPFKKDITTYCIQNEGFSKLSEKIKEEIAKNHQIIIIYPLLSASDKIPYLSLEQ
                     AKEYWQSHYEKVFVTHGKDKQKDEILERFRDEGNILLSTTVVEVGISLPRLSMIVIVG
                     AERLGLATLHQLRGRVGRVGLKSACYLYTKLKEIPSRLKEFASTLDGFKIAELDLKNR
                     LSGDLLDGFMQHGNEFKFFDFSKDEEILEKVKKDLAKKLPN"
     gene            complement(26174..27394)
                     /locus_tag="RJ239_000144"
     CDS             complement(26174..27394)
                     /locus_tag="RJ239_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDV7330305.1"
                     /translation="MQYLESRGIKIPFIFEKNSDFPIVVLKLVFRNCARSYDEIAGLA
                     KMFSRILNEGVDDKFFKDLEFRAINLEASSGFESLEINLSCLKENFDFALKSLEKLLL
                     KPRIEEKTLQKLKINALGELASKNSDFDYLAKNLLNAQIFKCKEFQSPNDGDEKSIET
                     LSLKDLQNFYKNFIHLSDLVVILGGDLEEKQAKEDLLKLLSKLQIGKKNTPKKYELGK
                     NIKDEILVRPESEQAYIYFATPFFADFKDKDLYLAKIALFVLGQGGFGSRIMEEIRVK
                     RGLAYSAYAMLDMNMSFSRVFGYLQTKNESAKEAKKIVKELFEDFIKNGMTQNELDQA
                     KNFLIGSTPLRYESLSKRLSMSFNEFYQGLNLGYYKEELKLMEKVKLETINAYIKKHQ
                     ELLNISFASIQNEN"
     gene            complement(27394..28440)
                     /locus_tag="RJ239_000145"
     CDS             complement(27394..28440)
                     /locus_tag="RJ239_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehypoxanthine futalosine cyclase"
                     /protein_id="HDV7330306.1"
                     /translation="MKRLDKKEALDLLHHASLTELGEMAYKRKLELHPEKITTFVVDR
                     NINYTNVCCIDCSFCAFYRHHKEDDAYILSFEEIGKKIEELEAIGGTQILFQGGVHPK
                     LKIEWYEELVSWIKEHYPNITVHGFSAVEIAYIAKASKISITEVLKRLQAKGLFSIPG
                     AGAEVLSDRVRDIIAPNKCDTATWLEVHRQAHKIGMKSTATMMFGTVENDEEIIDHFE
                     HLRKLQDETGGFRAFILWSFQSDNTALIQKHPEIMKQSSNKYLRLLALVRLYLDNFKN
                     LQSSWVTQGSLIGQLALKFGANDLGSTMMEENVVSAAGASYRMNQDEMIRLIRSLGEN
                     PAKRNTAYEILERF"
     gene            28514..29701
                     /locus_tag="RJ239_000146"
     CDS             28514..29701
                     /locus_tag="RJ239_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7330307.1"
                     /translation="MNYIELLKNNKNIRILASVQFIVYFGAWFSQTGVFTLLVELNAP
                     TWATATSAMLAFLPGVLLAPINGVIVEKNKPKKLLLSMISIELISIFCLIFVTSLSML
                     WLLFILIFIRLCVASIYFQAEMSLLAKILTPQELKLANEMHSVIWAISYTAGMASAGI
                     FIYFLGVKTAFLFDCILILIGISFLVRLSIPDFHQKTQSRFFTMIKEGFFYVLNNKII
                     FHLILLHAFIGLTAYETLVTLLAQHQYKEVLSAALVIGFLNAVRACSLAIGPMVLSKF
                     INDKNLFYMYLGQGLGIILWALTQFNFYISFLGLIGAGFFTSALWAYTYTMIQKNADK
                     EYHGRVIAYTDMIYLSFSAIISMLMGFLFEIGLSLELITGLLGMIFIFAAFYWKWFYK
                     KYL"
     gene            complement(29717..30805)
                     /gene="nusA"
                     /locus_tag="RJ239_000147"
     CDS             complement(29717..30805)
                     /gene="nusA"
                     /locus_tag="RJ239_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HDV7330308.1"
                     /translation="MEKIADIIESIANEKNLNLENVREKVATALINTAKRIYGQEYEF
                     FVDPKNLNLYQKITIVADNDERLQNKSESFIALSKAKSEAPDVEIGDELTYECSLENL
                     GRTAVNTLHKELEYHIQKLLEQTIFEKYKNKVGQMVFGTVVRVDNEENTFIEIDELRA
                     FLPRKNRIKGEKFKIGDVVKAVIRRVYTDKGIKIELSRTSPKFLECLLEAEVPEIKDG
                     YVNIIGCARIPGERAKIILQANGTNIDPVGATVGVKGVRINAVSKELHNENIDCIEFT
                     NESEILISRALAPAIVNSVKIEDKKAIVSLNSEQKSKAIGKNGINIRLASMLSGYEIE
                     LNELSSSQLNNAISNEEAMKNLQDLFKI"
     gene            30933..31175
                     /locus_tag="RJ239_000148"
     CDS             30933..31175
                     /locus_tag="RJ239_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330309.1"
                     /translation="MELKLARTLINEKPKNISLEKIEEAIEKEGQKFFYFDKDNTHKQ
                     LIALVNHFEKKGVSIYHRTVKYGLDDNDFMYEVHIL"
     gene            31172..32473
                     /gene="miaB"
                     /locus_tag="RJ239_000149"
     CDS             31172..32473
                     /gene="miaB"
                     /locus_tag="RJ239_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HDV7330310.1"
                     /translation="MSAKKLFIQTLGCAMNVRDSEHMIAELTQKENYALTEDIKEADL
                     ILINTCSVREKPVHKLFSEVGGFEKVKKEGAKIGVCGCTASHLGNEIFKRAPYVDFVL
                     GARNISKITQAIKTPKFMGVDIDYDESEFAFADFRNSIYKSYINISIGCDKHCTYCIV
                     PHTRGDEISIPFNIIYKEAQKAIEKGAKEIFLLGQNVNNYGKRFRNEHKKMDFSDLLE
                     ELSTIEGLERIRFTSPHPLHMDDKFLEVFANNPKVCKSMHMPLQSGSSEILKAMKRGY
                     TKEWYLNRALKLRELCPNVSISTDIIVAFPGESEKDFEETVDVLEKVRFEQIFSFKYS
                     KRPLTKAATMPNQIDEEIASRRLSTLQNRHSEILDKIVKKQENKTFKVLFEELRAGNS
                     IAGRTDNNFLVQVEGSEELLGQFKEVKITNAKRMVLYGEIV"
     gene            32457..33086
                     /locus_tag="RJ239_000150"
     CDS             32457..33086
                     /locus_tag="RJ239_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HDV7330311.1"
                     /translation="MGKSFKIHCLTYIIFILQWLIFLSCKKHYKGEKVDRKAGVILFW
                     HGKLALMPFAFRHYRQKNKKAYVMISHHKDGEQIAKIIKLFGLDTVRGSTSRGASSAL
                     RAAFKVLEQNDDIVITPDGPRGPYHSISDGSIILAQKKELKIRILNYEANRFWKFKSW
                     DKMILPKPFSKITYSLSEPLDILSLDKEKAKEFLMKQFDKISLADQFKE"
     gene            33088..34047
                     /locus_tag="RJ239_000151"
     CDS             33088..34047
                     /locus_tag="RJ239_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="clan AA aspartic protease"
                     /protein_id="HDV7330312.1"
                     /translation="MLFLLKKIFPQLFISIILEDKKNIVKASIYRGNKLISSNEKTFD
                     KSENLLEYIKNLSKHFLFYHTALFLDAKEQGLIPSTNIQDCEHFNIGKISLQHILLNN
                     ALVYTATEHVEYYSELFEEYRGLDFLYSPFALLYYNMQKEKQPDDQILLYGFKQGYLL
                     AIIVAKGNTILYGDFKIFEQELGLELELPSEDNQEIENNNDDTEVTLDNFNEALNNKF
                     DLLDQENNLETLDNNDNFNLDELNQFSNDMELCRYIITSIEKFYNDDKYAGVFINGIL
                     LYSESDININAIDFLESETFLEIKTKQINTLDLMIELMRKEVK"
     gene            34044..34571
                     /locus_tag="RJ239_000152"
     CDS             34044..34571
                     /locus_tag="RJ239_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330313.1"
                     /translation="MTYSFIQPRKKPIFTLFDKIWLGLFGFSILFILLVYFTYTIKIA
                     LINSSIDDEKQQVIVLQNQTKQNEMLYEILFDQSQIAKNFNTQNQIVKESLRNLFDII
                     VKTDNITLESVEQDEYSLKLIGVTPTREMFTLLLETPLKSIFDQSYTTYYRLDNGWYR
                     FVSISKQIPGVADER"
     gene            34561..35079
                     /locus_tag="RJ239_000153"
     CDS             34561..35079
                     /locus_tag="RJ239_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330314.1"
                     /translation="MKDKSLEEIDLLKLIICALSFISVCTALILFLLLPTLKNYKQAN
                     LRENSQLAILKAAKSKFDFSEDKISTLRSENNKSLEQFEQNFNIGNFNIFLQKYFQNV
                     KIQETKPEKQEKYLKNRLAIKATMNNPRRLYDFIDALKNYNNLIKLDYPLNLKAGEQG
                     ISIDLTLKVYSS"
     gene            complement(35071..36363)
                     /gene="thiC"
                     /locus_tag="RJ239_000154"
     CDS             complement(35071..36363)
                     /gene="thiC"
                     /locus_tag="RJ239_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HDV7330315.1"
                     /translation="MKTQMNYAKEGIFTKEMQIVAQKENLSKDFLLENIACGKIIIPA
                     NINHKSLDPNGIGFGLRTKVNVNLGVSNDCVDYSEEMKKVELAHKFGIEAIMDLSNYG
                     KTSRFRDELVNVSKAMIGTVPVYDAVGFLEKDLKQINAKDFLDVVYHHAKSGVDFMTI
                     HAGINSRAAHIFKQSKRLTNIVSRGGSVLYAWMMMKDAENPFFEYYDDLLDICLKYDV
                     TLSLGDALRPGSTHDASDGAQISELIELSLLTQRAWDVGIQVMIEGPGHMAINEIEAN
                     MQLEKRLCKGAPFYVLGPLVTDIGAGYDHISGAIGGAVAAASGADMLCYVTPAEHLRL
                     PNLEDVREGIVATKIAAHAGDIAKLPKERARDDEMSKARQEIDWEKMFKLAIDGEKAK
                     KMFNERRPDDLNSCSMCGKMCAMNTMNQILKGEDVSLA"
     regulatory      complement(36420..36524)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(36546..37307)
                     /locus_tag="RJ239_000155"
     CDS             complement(36546..37307)
                     /locus_tag="RJ239_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HDV7330316.1"
                     /translation="MSLQQIDQIISILNKQSKPYDWVMQEFAKVEELKNFDLDLETFE
                     LLGLGLTLNKDNIFTLKTRTTKIKDEIFCIVDIESTGGVSKGEILEIGAVKIQNSKEI
                     GRFQSFVKVKEIPKNITELTGITYEMVENASSLAKVLSDFRLFLKDSIFVAHNVRFDY
                     SFISKALNECGFGILLNRRICTIEFAQCCIESPKYKLEVLKEFLGVENMHHRALDDAL
                     AAAEIFKYCLGKLPYHIKTTEELINFTKTARIKQK"
     gene            complement(37304..37951)
                     /gene="rpe"
                     /locus_tag="RJ239_000156"
     CDS             complement(37304..37951)
                     /gene="rpe"
                     /locus_tag="RJ239_000156"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HDV7330317.1"
                     /translation="MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLT
                     FGPCVIEKISTISKLPLDVHLMVKDVSKFVDLFISLKPKFISFHMESEVHPIRLCEYI
                     RSQGIHPAIVLNPHTPIDSIKHMLEFVDMVLLMSVNPGFGGQKFLPLIHEKIKELRQM
                     IDKKNAKVFIEVDGGVNGLNASDLEESGADILVAGSYIFSSNDYKTAISSLKLEF"
     gene            38091..38285
                     /locus_tag="RJ239_000157"
     CDS             38091..38285
                     /locus_tag="RJ239_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HDV7330318.1"
                     /translation="MARVCQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRVTLEDGT
                     TRKMRIAASTLRTLKKQNSK"
     gene            38470..38685
                     /locus_tag="RJ239_000158"
     CDS             38470..38685
                     /locus_tag="RJ239_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HDV7330319.1"
                     /translation="MLHEYRELMSELKGKDAHFDKLFDRHNELDDMIKDAEEGRTSLS
                     SMEISTLKKEKLHVKDELSQYLANYKK"
     gene            38695..39792
                     /locus_tag="RJ239_000159"
     CDS             38695..39792
                     /locus_tag="RJ239_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CZB domain-containing protein"
                     /protein_id="HDV7330320.1"
                     /translation="MFGSKINHSDLQKLEEENKNLTHKIEKFQSENLELKNKITSLEQ
                     AALESKLKTDLLNVLLTGVLKNITIIQGDMLENVNKAEVISSYSKTSLAEMDELNHIA
                     NSINASLGNITESANKTRDVAGTLHRSVDEITNVINLIKDVSDQTNLLALNAAIEAAR
                     AGEHGRGFAVVADEVRKLAEKTQKATTEVEMNINLLKQNANEMYTQSEQVEKISIDSN
                     AHIMSFSEKFTHLVNEAHSTNSNAVGIASEAFVSLAKLDHIAFKLNGYKEIFSKSGKQ
                     LADHTSCRLGKWLASTGKERFGQNKSFLKINEPHEKVHENMNNAITIANTEDISKDIT
                     QHSIINKCEVAENASLDLFNVFKEMLDESDH"
     gene            complement(39824..40420)
                     /locus_tag="RJ239_000160"
     CDS             complement(39824..40420)
                     /locus_tag="RJ239_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HDV7330321.1"
                     /translation="MAFKNLKELSFEKSNYIKPKRFAYESNGRLCTWDFIESKDSVSV
                     LLYHKELESFIFVRQFRIPLWYHQMHDKDYVKDDDMGYTIELCSGLVDKKLSLEEIAK
                     EECIEELGYAPKNLEKIGDFYTGFGSGVSKQSFYFVEVDEKDKISSGGGVDDEEIEAV
                     YVKVQDFEKKCKNMIRTPLLDFAYMWFLKEKWGKLKII"
     gene            complement(40503..41432)
                     /locus_tag="RJ239_000161"
     CDS             complement(40503..41432)
                     /locus_tag="RJ239_000161"
                     /inference="COORDINATES: protein motif:HMM:NF012801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDV7330322.1"
                     /translation="MVALYGENEYFITDDLIFTTGLRYIYSNLFDSEFTPRIYLVYHL
                     NDNIAFKGGVSKGYKTPSAKQLTNGYYNYANGNALFGNPDLKPEESINYELGADFRVF
                     DFAHYSITGFITDFTNQISSEYLTGMQNGINCSNGTVCKRPINLGKTQTKGIEFAFNT
                     KTYNGFSLNSSYTFMDNRYKDSQKNWFGGDRIENLPRHIAMLKLNYERGKFNSYIKTR
                     ARLDTIAKARVGGNGSLPWQKYKPFYIVDLGINYKINKQSSLSFAVQNLFDKNFFDPQ
                     VTRWDGANPAGYANRYQDYTEGRSFWLSYKYDF"
     gene            complement(41460..41999)
                     /locus_tag="RJ239_000162"
     CDS             complement(41460..41999)
                     /locus_tag="RJ239_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron transporter"
                     /protein_id="HDV7330323.1"
                     /translation="MIEDTLSISARLKYYDKAASDLKWPTPVWNNNNQKPDNYQQRPD
                     NYQIAIHSPGAFTSLGFGSRLNWTVDDKNNIYFDIERYINEISVNSISSRAIKSEKQL
                     FKDNIVLNHDGNYDFDSTNSYLQYGSTKDKELHSQIWVGEGKVVLPWNLGQYGNLVNT
                     FGARIDYEMLKNDQASAGS"
     gene            complement(42008..42595)
                     /locus_tag="RJ239_000163"
     CDS             complement(42008..42595)
                     /locus_tag="RJ239_000163"
                     /inference="COORDINATES: protein motif:HMM:NF019335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HDV7330324.1"
                     /translation="MTQIKNMKFKKSLLCFLILSGALLKAEETYQLNDVVVSASGFEQ
                     DLVDAPASISIITKEELEKKPIKDIGEAIGDIPGVDVTMDKTGTYDFSIRGFGSSYTL
                     VLIDGKRQSVANGFYTNVFKGSESGYLPPLSMIERIEVIRGPASTLYGSDAVGGVINI
                     ITKKNPDKIEANIEFNTLLQQHSNHYGNAGVLMLM"
     gene            complement(42729..43667)
                     /gene="accA"
                     /locus_tag="RJ239_000164"
     CDS             complement(42729..43667)
                     /gene="accA"
                     /locus_tag="RJ239_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HDV7330325.1"
                     /translation="MASYLDFEKNIQQIDEDIINAQIKGDTEAVSILKKNLEKEISKT
                     YKNLSDFQRLQLARHPDRPYALDYIELILNDAHEIHGDRAFRDDPAIVCFMGYLGEKK
                     IIVIGEQKGRGTKDKIARNFGMPHPEGYRKALRVAGLAEKFQIPILFLIDTPGAYPGI
                     GAEERGQSEAIARNLYELSDLKIPTIAIVIGEGGSGGALAIGVADKLAMMKNSVFSVI
                     SPEGCAAILWNDPAKSEAATKAMKVTADDLKSQGLIDDVIDEPTNGAHRNKEAAAVAI
                     ADYVKKSLNELENIDVRELSANRMQKILKLGAYQEA"
     gene            complement(43669..44883)
                     /locus_tag="RJ239_000165"
     CDS             complement(43669..44883)
                     /locus_tag="RJ239_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HDV7330326.1"
                     /translation="MKRVVVTGIGMINALGLDKESSFKAICNGESGVNKITLFDATDF
                     PVQIAAEVKNFDPLEVVDGKEVKKIDRFIQLGIKAAREAMQDAGFSEELDKEEFGIVS
                     ASGIGGLPNIEKNSIICSERGPRKISPFFIPSALVNMLGGLISIEHGLKGPNISCVTA
                     CAAGTHAIGEAYKSIALGNAKKMLVIGAEAAICPVGIGGFASMKALSTRNEDPQHASR
                     PFDKERDGFVMGEGAGALVFEEYEEAKKRGATIYAELIGFGESADAHHITSPTLDGPL
                     RAMKKALNMAGNPKVDYINAHGTSTPVNDKNETAAIKELFGNNIPLISSTKGQTGHCL
                     GAAGAIEAVVSVMVLRDGVVPPTINQLVKDDECDLDYIPNISRKVDLKVVMSNSFGFG
                     GTNGCVVFKKVD"
     gene            complement(44910..45143)
                     /gene="acpP"
                     /locus_tag="RJ239_000166"
     CDS             complement(44910..45143)
                     /gene="acpP"
                     /locus_tag="RJ239_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDV7330327.1"
                     /translation="MATFDDVKAVVVEQLSIDADAVKMESKIIEDLGADSLDVVELIM
                     ALEEKFEVEIPDSDAEKLIKIEDVVNYIDNLKK"
     gene            45253..45921
                     /gene="tenA"
                     /locus_tag="RJ239_000167"
     CDS             45253..45921
                     /gene="tenA"
                     /locus_tag="RJ239_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiaminase II"
                     /protein_id="HDV7330328.1"
                     /translation="MMLFSNLIKENQKIWNAYLHHDFVKKLEDKSLKQENFLFYLKQD
                     YIYLLNYAKCYARLALNSNTAKELRFAMKFQNYIVEGEMELHRAILSLGINADELDIK
                     DESLVNIAYSRYMLSVGENGDFLDMLVALSACAIGYAKIGAEIINRLKNENLKDHPYK
                     EWILTYGSENFQNEAKEFEDFVNSYTSSVGAQKFQKLSEIFHTVTRLEVAFWEHSLRM
                     ELNL"
     gene            complement(45945..46802)
                     /locus_tag="RJ239_000168"
     CDS             complement(45945..46802)
                     /locus_tag="RJ239_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoB--CoM heterodisulfide reductase iron-sulfur
                     subunit B family protein"
                     /protein_id="HDV7330329.1"
                     /translation="MQKEYAFFPGCVLSQAAKESKISLEAIAPILGWKLNEIKGWSCC
                     GASQAQCVDPIATLVANARNIALAEEMKMPMLTTCSTCMLTLTKAKNTLDKGAKERIN
                     IFLAQGGMKYQGSTPITSLLWELYEDLDNLKSKVKKPLSNLKVALFYGCHSLRPEDAF
                     GKKESSTNPKSFESVVEVLGAKIVPFEKRLDCCGFHASYPAEKSVKKMSSQIVNNASE
                     NQADCVVTPCPLCQMQLDIYQERFQDYTNSKARLPIIHLSQLVGLALGLSKEMVGLDY
                     NIIDASKIA"
     gene            complement(46806..47771)
                     /locus_tag="RJ239_000169"
     CDS             complement(46806..47771)
                     /locus_tag="RJ239_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HDV7330330.1"
                     /translation="MKIIIDRFNGKEKYEQSYDIDDKDIQGKTLLSLLLFIKKTKDIT
                     LNFTASCQSAICGACAVRVNGHSYLACDTKMQDLLKEYDNPSSIRISPLGNFRVISDL
                     IVDWEPSIENLRKIRPAMVAKNEFSAEKGCKQSQEEFDRISKQWDCILCGSCASECNK
                     LEADSSDYMQPFVFTHVWRAAADSRGKDPMLHVKPSVMNGLWLCVHCQECADRCPKGI
                     SSVSDIANLRVMAIKKGLNEGLGPDHAEAFYKDLVEGSGRLNEIYLALRSEGVIGSMG
                     KTDIAFKLMRAGKMNPMHVFGEGEIEGYKDLVKMIKAAQEAAVKE"
     gene            complement(47768..49603)
                     /locus_tag="RJ239_000170"
     CDS             complement(47768..49603)
                     /locus_tag="RJ239_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HDV7330331.1"
                     /translation="MGEFSRRDFIKTACISVGALAASSSGVYALDDSSKMDKDINLPS
                     CDVLVIGSGGAGLCAAAAVRKENPKLSVVVATKMMPSRNATCMAEGGINGVTDFSNGD
                     SYKLHAYDTIKGGAYLVDQDAALKFCELAGKAIFNMDFIGTLFSRNEQGGVAQRLMGG
                     ASKKRCNYSADKTGHILMHSCLDDAISSGVKFLMNHELLDIGVVDGKCEGVVLRDIQS
                     GGIYPVLCKALVIATGGYTRIFYNRTSTPFIATGDGVAAALRAGLGFEDPEMIQFHPT
                     GVANGGTLITEAARGEGGYLLNNRGERFMKNYHEKMELAPRDVVARAIETEIREGRGY
                     GEGLGAYVLCDVRHLGKEKILKDLPKIRHTAMLFENIDLVDTPVPIRPTAHYSMGGIE
                     VAKFEDMGTKIAGIYVGGEASCISIHGANRLGGNSLADAVVTGHLAGIGATNYAKDAS
                     FGKGAKTHELAQKWQVRFKEITNNGGNGQEMYELREELGSQNWDNMGIFRTQEKLDLL
                     AKKLEDIQARYEKIRIPNPNEVMNTAFTDYVELGNLILLSRCACLAARNRLESRGAHT
                     REDYPKRDDKNFLKHSIVNLENDELKLSYKDVVVTEFSLDGRRVQ"
BASE COUNT        16745 a         9371 c         6485 g        17162 t
ORIGIN      
        1 cgaaaaacca tcaggaatag aaagcttgat atataaattt tgaaattttt tcaaaaaact
       61 taaatctttt ttgtattcat ttaaacgatt tatttttgga cttcctagat gatttaaaac
      121 cacttttaaa tttggatttt tacttaaaaa tttttctaaa aaaccaagct cttcattttt
      181 aatacaagcc tcaaaaggta tattgaaagt ttttaaaatt tctatttttt cttcaaagtc
      241 tgcttcaaat agtcttttag ctcctttttt gctcgtgtgc attacttccc taaaagaact
      301 aagctcttct ttatgcttaa aatccgctaa acaaaacaaa agattatgaa gctttttttg
      361 ctccaaagca aacaaagctt ccttttctaa atcatcacta ttaacctcaa catacatagc
      421 acctataaat tcaaattctt tatattcttg tttcatccta aaaaaatcat aattttgctc
      481 taatttttca tcgtctttta tccatgaaat aggtattttt tccaaatccc aaaggtgtag
      541 atgagcatca aaaatctttt gcattttttc tcacttttga gcctataaag ccataccaag
      601 ccacatataa aaacaaaggt gccattgcta aatacccagc gcctgtacca taatgatcat
      661 taataaaacc tataattata ggcataattg ctccacctac tatgctcatc acaagcaaag
      721 aaccgcctag ttttacttga tttaaaggta aattttttgt tgctaccgca aaaatagtag
      781 gaaaagaaat agacataaag aaaaataaag ctattaaaag cactatgcta aaaaacccgc
      841 tagcaaaata caagctaaag catataagca cattgattag agaataaaat cctaaaattt
      901 tttcaccttt gattatcttc atcaaaggag tagaaacaat gcgccctagc ataaatgcaa
      961 ccaaagctat agaaaaataa taagcacctt gcgcatcttt taaaccttca ttatgttcta
     1021 caacataatt gataaaaaaa gctcctgctg caacttgatt ggctatatac aaaaactgcg
     1081 ctaaaagccc taagttaaaa tgtctgtgtt taaaaacata tatgggctta gaatcatctt
     1141 tttgcttata atcatcactt accgcacttc cttctggaag cttatttgca acaaaagcaa
     1201 ttaaaatcaa aataacaatg acagcaattc ctatataaac aagctggaca tttcccatat
     1261 tagctaccaa tgcagcctcg atttgctctt tactcgcacc ctcttcttgt ttagtaatag
     1321 ataaaaataa aactccgcct ataataggtc ctacaaattg ccccaaacca ttaaaacttt
     1381 gcgcagcatt gattctaaaa ctcgcatttt tttcatcacc aagctttgtc atgtagggat
     1441 ttgcactagt ttctaaagaa ccaataccac aagctaaaat aaaaaacgca aacaaaaaca
     1501 aatgaaaaga agccaaattt gtagcaggta taataagcaa agctcctatg gcataaagag
     1561 ctaagccaaa aatgattccc attttataag aaaatctatt ggctatataa cctgcgggta
     1621 aggctatgat aaaataagca ccaaaataag caaactgtaa aaagccactt tcatgctggc
     1681 taatatgaag atgattttga aaatttttat tcatcacatc aataagtcca tagcttactc
     1741 cccataaaaa gaaaagagaa gttaccaaaa caatagctat ttttatattt ttagaatcag
     1801 tcatttttta ctccttagtt ttcatcccaa tttaatgctc tatctaaatg cacataacct
     1861 ccatctggca ttaaaatttg ccctgtagta tgtgaagcaa ggggactaag tgtaaaaacc
     1921 gctgtatttg caatttcctc tatggtagta aaacgatggc ctaaaggtat agcttttgcg
     1981 attttttcat attgctcttt aggattagga aaattttgca gccatttttc ataaagagga
     2041 gtcataactt cagcaggagc tatagcattt accctaacat tatccttagc aaaagcacaa
     2101 gcccattctc tagtaaaacc catttgagcc gctttggccg aagcataagc tgaagttctt
     2161 ccttgtcctg tgatgcctgt tttactcact atatttaaaa tactgccttg ttctttttta
     2221 atgtaaggca aacattcttt ggtcatagta taataatgaa aaagattatt ttcataagat
     2281 tttatcaaat cttgagtact tgtattttca atatgtaaat tatcatttgt acctgcatta
     2341 tttacaagag catagattcc accatgtttg atagcaactt tttttacaag cttttcaatt
     2401 tgctcataat tttttaaatc aatttcataa aattcatact cactagataa tttttttaat
     2461 tctttatcgt gctctttagg catagatctt gaaaaaatta caggaattcc gccttcgctt
     2521 gcccataatt tagcaatacc atacccaata cctttagccc ctcctgtaat aatacaaacc
     2581 ttatttttaa tttttaaatc catttattct cctttatcta aatttaaagt tatttttaaa
     2641 tgtattaata ccaatacacc taaaattgct atcaatgcta acactataag tccaaactca
     2701 actccaaaat gattttctat atatgttttt aaagtaggag ctacaaaacc tcctaaattt
     2761 cccaaggatc ctataagagc aatagcagcc gcggctcctt ttccttttaa aacttgagtt
     2821 ggcaaattcc aaaatatagg ctgaatgact ataaaaccta tagcagccaa gctaataaaa
     2881 aataaaaatg ccgccaaatt tgtaacaaaa gttgaagcta tcatgctcaa acttgctagc
     2941 agtaaaaata aaatcgcatg taaattccaa gaatgttttt tatcagccaa tgaggtaaat
     3001 attggcaagg cgataaaaac aaaaatccaa ggtatggcat ttaaaagtcc aacttcaaaa
     3061 cctacattta tttgcaatat ttgggcaatt ttacttggta aataaaaaag cactccataa
     3121 acacttaatt gaatacaaaa ataaacaaat acaaatttcc acaccaaaat acttttaaaa
     3181 atatctttta tagaataatc cttagcttta gtattggaaa tttcaatatg ttttagcaaa
     3241 atatcttttt cttttatatc taaccatttt gcatcttttg gatgtgaatc aagataaaat
     3301 aaacaaaaaa tacctactaa aacggtaata cctccttcta ttaaaaacat ccattgccaa
     3361 tttttaaaat atatatttgg tgtataatca agtataaaac cgctaattaa agaaccaaaa
     3421 acaaaagcaa ttggaactcc catttgataa attccataaa ccttagatcg atatatagct
     3481 gggaaaaaat aactaaggta taaaataatg cctggactaa aacctgcttc agttaaaccc
     3541 aataaaaatc ttaatacata aaaacttatt tctccttgta taaaaatcat tgccatagtt
     3601 acaagacccc aagtgatcat tatacggctc aaccaaattt ttgctcctaa tttatgcaaa
     3661 aataaatttg aaggcacttc aaaaatggca taacctataa aaaatattcc agcacccaaa
     3721 gcataagcag cctcaccgat gcctgcatca atttctatat gagatttcac aaagctaata
     3781 tttgtcctat caagcataga aagacaaaac atcaaaacaa tcaaaggcaa aatacgccaa
     3841 gatatttttt tacatactaa ctctaacttt attgaatttg catgtttcat cactttaccc
     3901 tttaacaagt tgtagcaagt ctccaaactg aaaaatcatt ttgctcgtta agctctgctt
     3961 ttaccaattc tccatctgaa attcgcacga ttaattctat aagctcatca cgcacttctt
     4021 cttttgtttt taccccatct ataatgcttc ctgcgttaat atcaatagca tcattcatat
     4081 tttcataaca aaaagtatta gaactcattt tgatagtagg cacgatagca gaacccgttg
     4141 gagtgccacg acctgtagta aaaacacaaa tatttgctcc acctgcaacc atagcactaa
     4201 gttgttctat atcattgcct ggtgtattca taaaagttaa acctttagaa actacaggct
     4261 tagcataatc aatcacatcc attaaggttc tagttcctgc cttataaaca cagcctaaag
     4321 atttttcctc tatagtacta agcccgcctg ccatatttcc tgggctagga tttgctcctc
     4381 gaatatcagc atgaaaagat ttgactaaat tctcataagc taaaatctta tcatatacct
     4441 ttttagctat ttcatcgttt tttgctctct tagctagtat ggcttcacaa cctataagtt
     4501 ctgtagtttc tgctaaaatt accgcaccac cctcatcgat tacaaaatca ctcaaacttc
     4561 ctaaagcagg attagcacta agtccgctat agctatcact tccaccgcat tctgtgccta
     4621 aaatcaaatc actgaaatct ccttcacttt tttgtaattt tgcagcactt tcaagcattt
     4681 cattgactat tttgatacca ttttcaatgg tatttttact accaccacat tcttgtatca
     4741 ctaaatattc aaccttttta taaggcgttg cttctttgat tttttctgct actgctttgg
     4801 cttgtattac ctcacaacca agccctataa ttaaaacacc aaaaacattg gcattgctcc
     4861 catgacctat taaaacatct ctagtttgta aagcatcaaa ttcaagctgg gagcaaccat
     4921 gctgatggtt gatataaact gctccattac attttctagc tatattttca cacactttat
     4981 tagcacaatg tacacttggt atgataatga ctttatttct taaaccaaat tttccatctt
     5041 cccttctata acccattatc tttttcattt tcattcctta tctccacgac ctctaattcc
     5101 cgcagtatta tggatatgca cccattcccc tgtactaata tcgcaacttg cactagctat
     5161 agcttctgcg tatttgataa taatttcatc tttttttata tcctttagtg caaatttatg
     5221 tccgcttgca atatcattta aaagctcaat atttgccact ttttcgcctt ttttaaagtc
     5281 acgcaaagct gtggcaatat tgtctttttc attgactata atatatcctt tcatagtttt
     5341 atacctgttt ctttttctat agttttaata agctcttttg cttcatcaaa gcgagtgttt
     5401 aattcttctt ttgtagcagg tgataaagga tgaatactag catttacaaa ttcaaatcct
     5461 ctggccttta aaagcaaagc aaaacccata ggaaaagcta tgctcatacc aaatcttatg
     5521 gcctttaata aacttttttg tattagcaaa gctctgccta tatttttttc attgattgat
     5581 ttgtaaattt cgctcataag ttctggaaaa actccaccta tgctagtcat agaacctttt
     5641 acacctgcta ataatgcacc tacataaaat tcttctcttc ctacaaaaac atcaaaatta
     5701 ctaggtacta catctaaaat atgatttaaa agcaaagcat ctccgctact atcttttata
     5761 cccacaacat tatcaagctt tgaaaccttt tctataaatt ttaagcttag tgctggtgca
     5821 aaaagaggta tattataaac atataaggga agtttcactt cagaagctaa atattttaca
     5881 tattcaaaaa gtgcatcttc actcaattta taataataag gcatagcaag taataaggca
     5941 tcaagaccta attcataagc tttttgcgcc aaaataaaag tgttttcata aattgtcgag
     6001 gtaatacccg tgatgatagg tatattattt tttgtagcct ttttggtgag tttcattaac
     6061 ttaacttgct cttccacgct caaagcttga gaatcccctg cacttccatt acaaaacaat
     6121 ccgttcaagc ctttagaaat accaaattca caatagcgaa taaattcttt ttcattgata
     6181 cttccatcat ctttatatgg agtaagtaaa gccggtaaag ttccttttaa aattcccatt
     6241 tttttccttt cgtatataca aaaatatatt tatatacaaa aaatataaca aaatatttgt
     6301 aaaaaaatca agctgttaac ttggtaaaaa ttcgtatttt attcttatta actgccaatt
     6361 tttacaaaaa aaatattaaa attaataaat aataaaaatt atgattttat gttactaaaa
     6421 gtaaaaaata tgctaaaatt tataaaaata aaacaaggat aaagacaata tgcatcagcc
     6481 cactcttaga gtgttaaata ttctagaatt acttgcaaaa gaaaagctta ccttaagtgc
     6541 tatagctaaa aaattaaaca ttcctgctgg aactctttgg cctattttac aaactcttca
     6601 agaaaaaaaa tatatcaaat gtgatttaaa aaataaaagt tattatttgg attttaagat
     6661 tatagaatta ggatgtaata taaaaaatga aaataatatt tttgaaataa tcaaaaagca
     6721 tatgaaaaat ataagaaatt taaccaatca aacttgtcaa atgggaattt taaaagatgg
     6781 aaatgtgctt tatttagaaa aaattgatgc caataataca gtacaattaa aatcttttat
     6841 aggcacttcg tatcctgctt atgcaacatc tttaggcaaa gccttactat caaataaaaa
     6901 taaaaaggaa ttagaaaaac tttatcctaa aaattttgat aaaattacag aaaacacctt
     6961 aaataatata aatgaactct atcaacaaat caagcaaatt aaaaaagaaa aaattgccat
     7021 agaaattgga gaaatgaatc ctcaaattga atgtatggct ataggcatag aacataaaaa
     7081 taaaataatt gctgccatta gtatatctta tctaatttat tgctctaata aagcttttag
     7141 agaaaaaaat aaaaaaatac ttctagaaga aaaaaataaa atagaaaaag ttttaaaaat
     7201 ttattttaat gatttagata cactgtatta atatagcccc gaagggctat aaaatagagt
     7261 tttattcttg ttctttaagt tttaaatttt gttcgccata aagccctgtt ccaacaggaa
     7321 tcattctacc tagaataaca ttttctttta aatcttctaa gtagtcaaat ttacctgcta
     7381 tacttgcttc agttaaaact ttggtagttt cttggaatga agccgcagaa atcacactat
     7441 cacttccaat cgctgctctt gttacaccta aaagcacagg ctcggcaata gctggttctc
     7501 cacccattct aatgattctt tcattttctt cacggaattt acgtcttgaa accaaatcac
     7561 cttcaataaa tttcgtatgt ccactatcta caacttttac ttgtcttagc atttgagaaa
     7621 cgataacttc tatatgttta tcagaaatca caacaccttg tccgcgataa acttgctgaa
     7681 tttcagaaat caaataataa tgcaaggctt tttcacctaa aattttaagc acatcatgac
     7741 tcgaaacaac tccatctgta agtttttcac ctgcatgaat aaactctcca tctcttactt
     7801 gaatatgttt tgatttgtcg attaaatact cagcacttgt tccatcttct gcttggataa
     7861 taattctttc tttagaacgc aaaggcttat caaaacgaac aacaccatca atttctgcaa
     7921 tcacagccgc attttttggt tttcttgctt caaaaagttc agaaactctt ggaagacctc
     7981 ctgtaatatc ctttgattta gctgctgctt ttggagtttt tgctaaaata tctgcttgag
     8041 caattttatc gccatcatga acaaaaataa cggtttttgg ttcaaggtga taacgcacag
     8101 ctttatcacc ttttcctgca attaccaaag ttggtctaac tccgctaggt aaatactcat
     8161 taattactaa agaacgctta cctgtagctt catcaatttg ctcatcggca ctataacctg
     8221 cttcaatatc ctcaaagctt acaacaccat caatttctgc aatgatagta ttattataag
     8281 catcccattc tgcaatcact tttctttctt ttttaggagc acttgcaatg atagtatttg
     8341 cgtcatcgat tttttcacta tcgttaaatt ctatcttaga ttctcttggg atatagtgtc
     8401 tttttgcttc tctatcattt tcatcagcaa tcactacaaa gaatcctttt tctttaacaa
     8461 tatcaccttt tttaacattt tttactctat ctaaaccatc gcctttaagg atgtaaaatt
     8521 tgagtgttcc tttttcgcct gctttgatat tttgaactac aggctcgcca tcttctacta
     8581 aaatttcact cgcaaaagga atacgatttg gtacattcca accctcttta atcacttcta
     8641 cgatactttc attttcttct acttgcatgc cgctttgata tggcaaataa agttttccat
     8701 ctatactgcc acttacacct gctaattcat ttggtttagc aagatcgtat tttcttaata
     8761 tgtattttac ttcttgtttt ttatctttaa tagaaacaat cacatcttca tgaatatttt
     8821 ctatattaat cacaccttta aatggagttt tgatttttgg ctccacaagt aaaaccgccg
     8881 catttctacg atttgctacg atatttttac cttctttgtt tttataagtt ttaagattat
     8941 aaaatcttat aaaaccttct ttttgtgcgc ttacttgtct atcttgtaaa tccgtacttg
     9001 cagttccccc gctatggaaa gttcttagag ttagctgcgt tcctggttca ccgatagatt
     9061 gagcggaaat aattcccact gcttcgcctg gttttactaa tttaccttca ccaagattga
     9121 taccataaca ttttgcacaa attccttttt tagctttgca ggtaatagga gtgcggatat
     9181 tgacactttt tataccgctt tcgccaagaa tttttgcttt ttcctcatcc attaaagtac
     9241 cttccgcaaa aagcacagaa tttgtaatag gatcaatcac atcctcagct aaaaccctgc
     9301 ctaaaattct ttcttctaaa gtttctataa tagaactatc tgcggtaatt tcattgattt
     9361 caacaccctc atgtgttcca caatcttcaa tggtaatttt tacattttgt gcaacatcga
     9421 tgagttttct tgtcaaataa cccgcatttg ctgttttaag agcggtatct gcaagacctt
     9481 ttctagcacc gtgagttgaa ataaagtatt caagaacatt tagcccttca cggaaatttg
     9541 aaataatagg cgtttcgata atagaaccat caggtttggt cataagtcct ctcatcgcag
     9601 caagctgaga aatttgagct gcactacccc tagcaccaga atctgccatc atataaatag
     9661 agttaaaacc ttctttatct ttttctacaa gcttcatcat ttcttttgaa agaacattgt
     9721 ttgtactttt ccaaatatca atgattttat tgtatctttc ccctgaagta atcaaaccga
     9781 gattataaga attttgaatt tctcttactt gtttttttgc ttcatcgata gctttttgtt
     9841 tatcattagg aacaataata tctgcaatcg aaattgaaat acctgcttta gttgcatatt
     9901 caaaacctaa atttttaagt ctatctaaga aacttgctgt aatctctaaa ccaccttgtt
     9961 tataaacata atctacaagc gcagcaatgt cttttttctt taagacttta ttccaactat
    10021 tttcaggcac aaaatcaggc aagatggatt taacaatcaa tcttcctgct gtagtggtaa
    10081 tctttctacc atctaccata gtttgtatgc tcgcatgaat atccaaacac ttgctttcaa
    10141 gtgccatcat cacttcatca atgcctgtac aaattttatg cgaaccttta gcacctgctt
    10201 tttccaacga aagataataa attcctaaaa ccatatcttg cgatggaacg gttacagact
    10261 taccgcttgc tggtaaaaga atattcattg atgaaagcat aagcacttta cattctgcaa
    10321 tagcctcttg agaaagcggt acatgcactg ccatttgatc cccatcaaag tctgcgttaa
    10381 atgctgcaca aaccaaagga tgaagttgta tagccttacc ttccactaaa acaggatgaa
    10441 aagcttggat agaaagctta tgcaaagtag gtgcacggtt tagcataaca ggatgtccct
    10501 ttactacctc ttctaaacat tcccaaactt cattggtttt attttctatc atttttttag
    10561 cttgttttac tgtggttgca taaccttttt cttcaagctt agctaaaaga tgtggcttaa
    10621 aaagctctaa agccattttt ttaggtaaac cgcattgatc cattctaagt tttggaccta
    10681 caacaataac gctacgacct gagaaatcca cccttttacc tagtagattt tgtctaaaac
    10741 gtccttgttt ccctttgatg atttcactta aagatttcaa tgggcgttta tttgctcctt
    10801 ttacagcatt agcacgacga ccgttgtcaa aaagcgcatc aacagcctct tgaagcattc
    10861 ttttttcatt tctgataatg atttcaggtg catcaagttc cataagtttt ttaagacgtg
    10921 tatttctatt gataacacga cgatataagt cattcacatc agaaactgca aatttcccac
    10981 catctaaagc cactaaagga cgcaaatctg gcggtaaaac tggaagattt gtaatcatca
    11041 tccattcagg acgatttggt acagcttcgt cgctatcggt attggcgttt aaatttgaat
    11101 ttaagaaatt ttctacaact tttaagcgtt taatgatagt ttttttctta gcctctgaat
    11161 ttgtagcccc catttcttct ttaagctgat ttaaaagcgc tacaagatct aaatttgcaa
    11221 gtaaatcacg aacaacttct ccacccattc ttgctttaaa gccgctattt tcatagcgtt
    11281 gcattaaatt ttgatattgc tcttcgttca aaacatcgca atattccact tttttagtac
    11341 tttcattatc atagaaagca tcacctgggt tttcaacaat ataagcttca taataaagca
    11401 cgcgctcaag atctttcatc ttaacaccca aaagcgttcc tatacggctt ggaagagaat
    11461 taacatacca aatatgagcc acaggagtta caagctcgat atgccccatt ctagaacgac
    11521 gcacttttga atttgctact tcaacaccac atttttcaca cttaacgcct ttaaaacgca
    11581 tttttttgta tttaccacaa agacactcat aatctcttat aggtccaaaa atctttgcac
    11641 aaaaaagccc atctctttca ggctttaagg ttctataatt aatagtttct ggttttttta
    11701 cttctccata agaccatgat ttgatttttt caggacttgc aagtcttagt tgaaatgctt
    11761 caaaatctct aggtcttgca tcttctttaa tttctattac tttaaattta ctcattatct
    11821 tcatccttat caaaaatctc aacatctaaa gcaagagatt taagctcatt ggttaataca
    11881 aaaaatgttt caggaattcc tgttgctgga acattttcac cttttgtcaa tgctttatag
    11941 gcactaaatc taccttctac atcatctgat tttatggtta acatttctct taaagtgtga
    12001 gccgctccat aagcttcaag tgcccaaact tccatttctc caaatctttg tcccccaaag
    12061 agtgctttac cacccacagg ttgttgggta accaagctat aaggtcctgt acttcttgca
    12121 tgaacttttt catcaaccaa gtgatggagt tttagcatat acatacatcc tacatgaaca
    12181 cgctctgcaa ttttttcccc cgtgcgtcca tcataaagtt ctgttttgcc atccatatct
    12241 atcttagcca ttttaaaaag cttgctaaat tcttctatat ttacaccttc aaaaacagga
    12301 gtagaaaatt taactccttt actccagtct ctagcatagt ttaaaagctc ttcatcgctt
    12361 aagcttttaa taaattcttt ttcgtttgca agtcttggaa tagaacaaat ttcaagtatt
    12421 ttcgctctta attctttaag aaaatctttt tgctttctat caaaaatttc ttgaatttga
    12481 tccccaagtc taagtccaac taaacctaaa tgactttcta aaatttgacc tatattcata
    12541 cgacttggaa cgccaagtgg attaagcgca atatccacgc tcttaccatt tggcaaataa
    12601 ggcatatcta cttcaggaac tatagttgaa actatacctt tatttccatg acgtcctgcc
    12661 attttatcac cgactttaag ctttcttttt gtagcaatat aaactttaac aagcttaatt
    12721 accccacttg gtaaaatatc atctttttct aaaatttcaa gcttttcatc gtgttctgct
    12781 tttaattttt tcttctcatt ttggaaatga ttttttaaat catcgtattc tttttgaatc
    12841 tctttagaat aagctttaat caaagttgtt aaagtaaaac gattgatttt ttcaagttcg
    12901 ctaatatctg cagtttgtcc ttttttataa tttttatctc caattttttg atcgctattt
    12961 aaagaggctt tggaaagaag agcacaaaca cgaagcattt cttctctatc catcatcaaa
    13021 agtctatcat gatgctcttt ttctaaagcc attttttctt tatcataaga ttttattgcg
    13081 cgatcatctt tttcatagcc ttttttagtg aaaattttaa catccacaac aacaccctct
    13141 aaagaagcgg ttgcataaag ggatttattc acaacatgtc ctgctttttc tccaaaaatc
    13201 gctcttaaaa gtctttcttc aggagttggt ttaacctcac cttttggaga aaccttaccc
    13261 accaaaatca tacctggttt gatatgggta ccaatttttg caataccgct ctcctcaaga
    13321 tgcgcaacat cttcttcttt tacatttgga atatctttgg taatttcttc tataccgtct
    13381 tttagttctc ttgcttcaat ttctttttca taaatgtgca cgcttgtaaa agtatcttca
    13441 cgaataattc tctcacttac aactatagca tcctcatagt tataaccatt ccaaggcata
    13501 aaagcgatta aagcattttt acctatagca agttcgcctt gatccataga aggaccatct
    13561 gcgataattt gtcctgcttt tactatatca ccttttttaa caatagggtg ttgaatataa
    13621 tttgtatttt gattggttct taaatttttc tccatagtgt aatggtcaat aaatggacct
    13681 ttatcatctt cacctaaaat gaaaatgctt ttattatcca ctttctcaac cacaccgcca
    13741 cgctttgctt taacagcttc ccaagcatca cgcgcaataa tttgttccat acctgttcct
    13801 actatcggag ctgaagcagt aagaagtggc acagcttgac gttgcatgtt tgaacccatt
    13861 agcgctctgt ttgcatcatc gtgctctaaa aacggaatca aagaagctgc aactccaaca
    13921 accatacctg agcaaagatc gattaattgc acttcttcgc gtcttgcaag tatagtttca
    13981 ccatcttgcc tagcctcaac aaattcttct actatattgc ctttagcatc aaccttagtt
    14041 gaagctggtg cgataaacaa gccttcttct tgtgtcgctg taagataaac aacttcatta
    14101 gtcactttac catttacaac ttttctatat ggcgcttcaa caaagccaag ttcatttact
    14161 tttgcataag tagaaagagt gttaatcaaa ccaatatttt gaccttcagg tgtttcaact
    14221 ggacaaattc taccataatg tgtcgcgtga acatcacgca cttcaaaacc tgctctttct
    14281 tttacaagtc caccttcacc aagcgctgac aaacgacgct tatgagtaac ctcgcttaaa
    14341 gggttggttt gatccataaa ttgcgaaagc tgacctcctg taaaaaattc aatgatagtt
    14401 gtagtaatca ttttaggatt gattaaatca taaggcatta ctttatcaag atccgcattt
    14461 aaagaagtaa atttatctct gatcgccttt tgcatttttg caagacctaa atgaagttca
    14521 ttggctaaaa gttcacctat agaacggata cgacgatttc ctaaatgatc tctatcatca
    14581 atatgtcctt taccattttt tactttaatt aaatattttg cagttttaat aatatcttca
    14641 ttagtcaaaa cagtaacata ctcaggtact tcaagaccta atttatggtt cattttcata
    14701 cgacctacct tggtaagatc gtatctttca ggattgaaga ataaatcatt tacaaaagcc
    14761 ttcgctgcat cttttaccac aggttcacct gggcgcataa ctttgtaaat tctaatcgca
    14821 gctaaatcat tttcatcatc gatattttca ctttgtttaa gaagttttag agtttctcca
    14881 tcttgggcaa aggagttaat aatcgctgca tcaacgccat tagccaagtc atttgctata
    14941 tcaaaacttt tttgctcttt aatcttagca agcttactct catctaacaa agttaaagaa
    15001 tcaaataaaa cctctccact ttctttatca ataataggat ttgctaaata acgattaagt
    15061 aaaatttcta caggatattc tatccatttt aaaccgtctt taataagctg ttctgctttt
    15121 ttctttgtaa gtctttttcc agcttgatga acgatttttc ctttttcatc tttaatatca
    15181 tattctattc tatccataaa atcatttgga ttaaattctg ttaaaaattt atcttttttc
    15241 acatgtatag tctgaatagg ataaaacaac ttaataatat cttgtttttt ataccctaaa
    15301 gctctaaaaa gcatagttac aggaactttt ctacgcttat tgattcttac atacaaaaca
    15361 tctttggcat cgtattcaaa ataaagccac gaaccacgat caggaataat ttgtgctgta
    15421 taaacaagct tatttgcaac cgttgaactt tcttcttctt taaaaataac accagggctt
    15481 ctatgtaatt gatttacaac cactctctca accccgttaa tgataaaaga tacacgatct
    15541 gtcattaaag gaatttcgcg gatataaatt tcttgttctt taatatcttt tacgccaact
    15601 ttttcccctg ttttttcatc tttttcatgc agagtaagac ggattttcat ttttaaattt
    15661 acagaataag tcaaacctct ttccatgcat tcgcgaatgg tatattttgg cttgcctatt
    15721 tcactactaa catattcaag actcaatcta ttttgcggat catgaatagg aaaaattgat
    15781 ttaaaaactt tttctatacc actttcacca ttatcaagat ttaaaaaata atcaaaactc
    15841 tttttttgta attgtagaag atttgggatt tctatttgtt ttgaaatgtt tgagaagtct
    15901 actcttaaac gatttcctaa tttattatct aacatatcgc acatacctca tggtaaattt
    15961 tgtaaattta aaaaagaaga cctaaaaatt aggtaaaaat aaaaaaagaa gacttgcctt
    16021 ggcaaatctt cttctaactt taaagcttaa aattacttaa gttctacttt agcaccagct
    16081 tcttcaagtt gttttttagc ttcctcagct tcagctttag ccacaccctc ttttagagtt
    16141 gaaggagttt gctcaactgc atcttttgct tctttaagac caaggcctgt aagagcacga
    16201 acgattttaa taacttcaat ctttttagca ccgccatcag ttaaaacgat atcaaattca
    16261 gttttttctt cagcagcagc tacagcacca ccagctacag caccaccagc taccattaca
    16321 ggagcagcag acacaccaaa tttttcttca aattccttta caagttctga taactcaaga
    16381 acacttaaat ttgaaatata ttctaataca tcttctttag agattgccat tttttatcct
    16441 tttatttaat ttattcagat tcttttttat ttttaagcgc atttaaacct attgtgaaat
    16501 tggtaattgg cgcattccaa acttgcaaaa gcatagcaag caactcattg cgtgaaggca
    16561 ttttagcaag agctttaacc ttagcaacat ctgcaacttc gccttcaata tgagctgttt
    16621 tgatttcaaa tttatcgtta ttttcttcaa atttagcagc tacttttgaa acacttagct
    16681 gatcttcgcc ccaaagataa atatttgtat ctttaagaac tagacctgtt ttaccggaat
    16741 tgttaagagc aatgttagcc aaagtatttt taacaatttg aacttttaca ttgttttctc
    16801 ttgcattatt tctaagctct tctagttttt ttgtgctaag acctctgtaa ttacaaacta
    16861 caatagcttc actagcttta aaaccttctt caagtttagc aataatctca actttttcgc
    16921 ttctagtcac attttctcct ttccgattga gatttcaagt agagtggaaa tccaattaag
    16981 cttacgcctc gactatcttc aatctaaaat aaacatttca aaaaatcaaa aattttttca
    17041 aatgtttatt ttaaaacaaa agagttgcaa aaaagcaact cttatttcat atcaagcaat
    17101 tcttgtgttt caagctttac agaagggctc attgtcaaag ataaagccgc atttttaata
    17161 tatctacctt tagctgcagc aggtttatgt ttgttaattg cctttacaaa agtgctaaca
    17221 ttatcccata attgttcttt ggaaaaactt actttaccaa gacctgcatg gatatttcct
    17281 tgcttatcaa cacggaaatt tacctgacca ctttttgcat tattaactgc ttgagcaaca
    17341 tccatagtca ctgttccagt tttaggattt ggcattaaac cttttggccc taaaattcta
    17401 ccaactttac caacaagtcc cattaaattt ggagtagcaa tcaaaacatc aaaattcata
    17461 ttaccttttt gaatttcttc tactaaatca tcgctaccca caatatctgc accagcattt
    17521 ttcgcttcat cagcttttgc gtcttttgca attacagcaa cacgaacttt tttacccgtt
    17581 ccagcaggta aaacaacaga tcctcttacc atttgatctg catgtcttgg atcaacatta
    17641 agttttaaag caatttctac agtctcatca aatttagcag actttaaagt ctttattgta
    17701 tcaattgcat cgcttaaagc atactcttta tttgaatcaa ttttttgtga taattctttt
    17761 aatctttttg ctatcttagc catttatttt ctccgcattt taaagtgcta ccgcctttta
    17821 ccttggcggt gaaaggatta atctacgatt tcaacaccca tagaacgagc tgaacctgca
    17881 ataattttag cagcttgatc tctatcttta gtatttaaat ctgcaatttt cttatctact
    17941 atttctaaaa cttgagcacg agttaactta cccaccttat ttttaagtgg attatccgta
    18001 cctttagaaa ttccagctgc ttttttgatc aaatccgtag ctggcggttg ttttgtaata
    18061 aaagtaaaac ttttatctgc ataaacagtg ataacaacag ggatattaaa acctgccata
    18121 tcttttgttc tttcattaaa agccttacaa aactccataa tattaacacc ttgctgaccc
    18181 aaagcaggac caacaggtgg tgatgggttt gcttttgtgg cagcaatttg caatttaatt
    18241 tcgcctacga cttttttagc cataacaaat ctccttactt gatataaatt aaattatttt
    18301 ctcaacttga gaatataaga tctccactgg agttgaacgt ccaaaaatag aaacatttaa
    18361 ttttaataaa ccacgaacca tatcatactc ttctacaatt gcagtaaagt ttgcaaatgg
    18421 cccttctgtg attctcacat tttccccttc ttcaaaagaa atctttggtt taggcgctgc
    18481 acgattgtga actttttcca aaatcaaatt aatatctttt tctgttaaag gggttggctt
    18541 tttggattct ccaataaaac gaccaacctt tggaagagat tgaatgcgat gccaaagctc
    18601 tgtatttaaa tcaagaagtg caaaaacgta tcctgaatac aaacttcttt cgctaatctt
    18661 ctcctttcca ttcttaaatt caataacatc ttcagttgga acaacaattt ctttaagttg
    18721 ttcttcaatt ccgttatctt ttactaaatt ttcaatggct cttttaactg ccatttcact
    18781 gccagcataa gtttgaattg cataccattt atgagtactc atttactctc cttatacgat
    18841 cgcagaaaca atagaggaca taagccaatc cactaacgcc aaaaacaaag aaatcaccgc
    18901 aacaaccaca aaaactgtaa tataggcatt tcttacctgt tcttttaaag gaaaaattac
    18961 tttccttaat tcggcttttg ataatttaaa ataagttatt aatttttcca tttatttaaa
    19021 ccttaattat ggcagggcaa gagggattcg aacccccaac catcggattt ggaatccggc
    19081 gctctaccgt tggagctatt gccctaaggg cgcaagctta actttttagc ttaacttctt
    19141 tgtgaagtgt atgttttttt aatcttgggc aatatttttt taattctaat ttttcagtag
    19201 tatttttact atttttatag gtgctataat taatatcacc acattcttca cactttaaac
    19261 caactttaat tctcatttca attttcctta aaaaattaaa gccaagcttt taacttggct
    19321 ttattaaatt atttaataat tttagaaaca acacctgaac caacagtttt accaccttca
    19381 cgaatagcaa aacgagttcc ttcttcaagt gctactggag cgatcaagct tacagtaatt
    19441 ctcacatttt cacctggcat aaccatttca acaccatcag ctaatttaat cgaacctgta
    19501 acatcagttg ttcttacata aaactgtggt ctatagttgt taaagaatgg agtatgtcta
    19561 ccaccttcat ctttatttaa gatataaact tcagcttcga agtcagtgtg tggagtaatt
    19621 gattttggtt tagcaagaac cataccacgg ataacttctt cttttttagt accacgaaga
    19681 agaacaccta cgttatctcc tgcttcgcct tgatccattt cttttctgaa catttcaaca
    19741 cctgttacag ttgttgtttg agtatcttta ataccaacga tttcgatagt atcacctact
    19801 tttacaacac ctttttcaat tctacctgta acaacagtac cacgacctga aattgagaaa
    19861 acatcttcaa ttggcatcaa gaagtctttt tcagtatcac gagttggagt tggaatatag
    19921 ctatcaactg cagccataag atccataatt tttgctgacc attcaccatc ttgtccagct
    19981 ttagcttctt caagagcttt taaagcagaa ccagaaataa taggtgtatc atcgcctggg
    20041 aaatcataag agcttaataa ttctctaatt tccatttcaa ctaactctaa aagttcagca
    20101 tcatcaacca tatctgcttt attcataaaa acaacaatat atggaacgcc tacttgacga
    20161 gaaagaagaa tgtgctctct agtttgtggc atagggccat ctgcagcaga aacaaccaag
    20221 atcgctccat ccatttgtgc agcacctgta atcatgtttt taacataatc tgcgtgacct
    20281 gggcagtcaa cgtgtgcata gtgacgattg tctgtttcat attcaatatg agaagtagca
    20341 atagtaatac cacgctcttt ttcttctgga gcattatcga tattatcata atctttaagc
    20401 tctgctaaac ctcttctaga aagaacagca gaaatagcag ctgttaaagt agttttacca
    20461 tggtcaacat gaccaatagt accaatattt acgtgtggct tattacgtga aaatttttct
    20521 ttagccattt ttttcctccg tataaaaaat aaattgagca aagcaagtct tatatctata
    20581 taattttttc aattcatgga gctcatagcg ggaattgaac ccgcgacctc tcccttacca
    20641 agggagtgct ctacctctga gccatacgag cgctcagaaa aattatacac aataacagac
    20701 aacaaaaact cttaaatggg atatatactg taagttaaag gttttaaaat acagctccca
    20761 gttcttttaa attattggag cgggaaacgg gactcgaacc cgcgaccctc agcttggaag
    20821 gctgatgctc tagccaactg agctactccc gcaaagcatg gtggtgagtc gtggattcga
    20881 accacggaag gcgaaagcca gcagatttac agtctgccct cgttggccac ttgagtaact
    20941 caccataaaa atattgcttt ttcaatattc tggtcaaaca ctgctaaaat aaatggagct
    21001 ggttaaggga cttgaacccc cgacctgctg cttacaaggc agctgctcta ccaactgagc
    21061 taaaccagca aaaataaaag taagattata actcaaaaaa aaaattttgt caagactttt
    21121 ttagtttttc tataaaattt tagtcttgta aattttatta tcataaacca atattatttt
    21181 tatctatatt atgataatca aataaattta aaaatttctt tgctctttcg ctttttggat
    21241 ttttaaaaaa acttttagga tcattttctt cgatgatttt tccttcatcc ataaaaataa
    21301 ttttatctgc tacagcttta gcaaaaccca tttcatgagt aacaataagc atagtcatac
    21361 cctcttttgc aagatttaac atcacttcta aaacttctct gacaatctca ggatccagcg
    21421 ctgctgtaac ctcatcaaaa agcattaact caggattcat gcataaactt cttactatgg
    21481 caattctttg cttttgtcct ccgctaagtt ctcttggata agcatgaatt ttatgcaaaa
    21541 gccccacctt ttcaagccaa attttagcct cttttaaaac ctcatctttc tttctttttt
    21601 gcactttcat aggccctaga agtatatttt cttcaacact taaatgctca aaaagctcat
    21661 aagattgaaa aaccatacca actttttgac gcattcttgg ccattcttta aaatctttat
    21721 ctattttctc attatcaata taaatattac cacttgcaat ctcttcaagc ccattaatac
    21781 aacgcaaaag cgtagatttt ccacatccgc taggacctaa aatcaccaca acttctttag
    21841 ccttaacttc taaattaata tcttttaaag catgatgcga accataatac ttttgtaaat
    21901 tttctatttt tagtatactc attttagctc cattttttct ctaattttct tgaatataaa
    21961 gtgataggat aacaaagtat aaaaaagata aaaaaaatca aaccataaat aataaaaggt
    22021 gcaaaatcat ttctattatg aaattctata atttgttgcc ctacttttac aagctctacc
    22081 gcgccgatta aataagcaaa ggttgtactt ttaatcatac gagtaagtaa attcatgctc
    22141 ataggagtta aacgacgcat agcttgtgga ataataacat aagcaaaact ttgcaccgta
    22201 tttaaaccta aagatgatgc actttcatac tgatgttttg gaatactctg caaggaaaca
    22261 cgcaccaaat ccatcatctc aaaacaaccc caaatgctaa aaacaataat agctgcactt
    22321 acagaactca aatcccaccc aaaccatcta ggaaaaccaa aatacaccac aaaaagccat
    22381 actaaaagtg gcataacacg cacaaattct aaacccaaac gacaaaaagc atagatatag
    22441 gtatttttaa aactcattaa aattcctaaa aataacccac ctatcgaagt aataataatg
    22501 ctgataaatg aaatttcaag agtgacaaaa agcccttgcc agagtcttaa aagcgtatcg
    22561 gtatttaaaa gttcaagcat gaagcaacct tttttcaaac tttagcaaaa taaaagacaa
    22621 aggcaaaata atgcataaat atcccataaa caacaaaaac aatagctcat ctgtcttata
    22681 ggttaaggaa tttaaactct tcattaaatt caccaaatct ggcaaggcaa taatactaac
    22741 gactgaagtt tctttgatta aaaatataat attagcacta atacttggca tagaaatagc
    22801 caaagcttgc ggcaaaatca cataacgcaa atttccaaat tttgaaaaac ccaaagaaag
    22861 tcccgcttca aactgctgtt ttcttatggc ttcaaatccc gctcttaaac tttcagccat
    22921 ataagaacct cctaaaaaac taagtcctac tatagcacaa gcaaaagaag gccttaaagt
    22981 ttcttctacg cttaagcaaa tcaaatcaag cggtggaatt tgctctaaat gtatattaaa
    23041 tttaggtaaa gcataatata agaaaaaaag ttgaattaat aaaggcgtat ttcttgaaaa
    23101 ctctatataa agcttgcaaa tattttctaa aatttttatt ttaaaataac tcattaaaat
    23161 acaaaacaaa cctattatca aagaaaaaat aattccaaaa aagcttagtt ttatcgtaag
    23221 ccaagcagcc gttaaaaaag caggagcttg agctaatata aaatcaaaat ccattctcta
    23281 ccttaaattt taccaaagtt ctttcatgat catatcttta tttaaaattt caattctacc
    23341 tttttttgta tcaataagtt ctgaaatttt aagttctttt aacactcgag ataaagattg
    23401 cgctctaaca tttaaatcaa ttgcaatttg tttttgtgaa attgtatcta aatttttttc
    23461 attttccaaa agatacttta ataatctcgt ccttaaatct aatgcatttt gagataattt
    23521 cttttctaaa attttaattt tatcaaaaag tgaactgata agtaaaaaat tgaattcttt
    23581 attttcactg cataaatttt gaaaattaat aaaatcaatt tccaaaattt ctccatcctc
    23641 ttcaaaaaca gcattagcag gataatttaa ttttttaaaa gcaggcattt ctgctataaa
    23701 atttggagga ttaaaataat gcaaagtaat ttctttatca cttgctgtac ttttataaat
    23761 gcgtattttt cccttgagta aaataaaaaa atttttagcc tcttcgcctt cataaaataa
    23821 aatactattt ttttgaaatt tttttaattt tcctacacta gataaaagtt ctaaataatc
    23881 tttcattata taatatttcc attcttaact tatgttaaat ttaatttatc ttatttttgc
    23941 tatattaacg ccataaaatt aacatttaag aaaggcttat atgaaatttg aaacaattaa
    24001 tcaagaaagc atagcaaaac tcatggaaat attttatgaa aaagttagaa aagataagga
    24061 tttaggtcct atttttaaca atgctattgg aacaagcgat gaagaatgga aagaacataa
    24121 agcaaaaata ggaaattttt gggcaggcat gcttttaggc gaaggtgatt ataatgggca
    24181 acccttaaaa aagcacttag atctacctcc ttttcctcaa gagttttttg aaatttggct
    24241 aaaacttttt gaagaaagtt taaatatagt ttataatgaa gaaatgaaaa atgtcatttt
    24301 acagcgtgca caaatgatag cttcacattt tcaaaatatg ctttacaagt acggcggaca
    24361 ttaatttggc aatttttttg ccaaatcttt ttttaccttt tctaaaatct cctcatcctt
    24421 ggaaaaatca aaaaatttaa actcatttcc atgttgcata aaaccatcga gcaaatctcc
    24481 actcaaacga tttttaagat caagctctgc tattttaaac ccatctaaag tgctagcaaa
    24541 ttcttttaaa cgactcggaa tttctttaag cttagtataa agatagcaag cacttttaag
    24601 ccctacacga cctacacggc cacgaagttg atgtaaagta gcaagtccta aacgttccgc
    24661 tcctacaatc actatcatac tcaatcttgg caaagaaata cctacttcca ccactgtagt
    24721 gcttagtaaa atatttccct cgtctctaaa acgctctaaa atttcatctt tttgtttatc
    24781 ttttccatga gttacaaaaa ctttttcata atgactctgc caatattctt tggcctgctc
    24841 taaagaaaga taaggaatct tatcactagc actcaataag ggataaataa tgataatttg
    24901 atgattttta gcgatttctt ctttgatctt ctcgctaagc ttagaaaaac cttcattttg
    24961 tatgcaataa gttgtaatat cttttttaaa aggcatttgt ttaataaagc taaaatttaa
    25021 aagttcagat tgtatcatgc ttaaagttct tggaataggc gtagctgaaa actgtataaa
    25081 atgaggggca aattcttgtt tatttaaaga atgaattttc tcacgctgag ctgatccaaa
    25141 acgatgttgt tcgtctatca ttacaagtac ggcattatgg ctttctaaat gaattagagc
    25201 atgagtgcct ataacaagat ttgctttttg gatattttgt tctaaatctt tttctttttt
    25261 acccccttta ataaacaaaa tattcataaa atcaggtaaa aatttcttag cctcttcata
    25321 aagctgatac gctaaaatac tagtaggtgc cattaaaata gcttgcttag gataaaccat
    25381 caaagccgca ccaagtaaaa ccaaggtttt accacacccc acatcaccca taatcacacg
    25441 ccttttggct tcttttgagt gtaaatcttt ttctatgtct tttaaggcat taagctgatc
    25501 tttagtaaga gaaaaaggca aatctttaag ccaattggct atattaaaaa cattgatttg
    25561 atgagcttta aaatgcgttt ttttagcttt taaacgcttt aaaaaattat atatttctat
    25621 atattttaaa tctttgctaa aattttgcaa attttcaaac ataaaaaaac ttttttcatc
    25681 ataagcatgc aaatttaaaa gaaaatgtat atatttatcc tctatgccac tttcttttaa
    25741 attttcataa ttaagatatt tatgtataaa agcagcaatt tttgtatctt ttaaacctaa
    25801 aatttgatac tttggactaa aaccctcaaa agaagttaaa attttaggat tgttaaattg
    25861 ccaagtgtga ttaaaatgcg agagtttagc attaaaaata agctcttttc ctaccttaca
    25921 aataccaaaa tgccaagctc taggatgaaa aaacacaaaa gaaatatttt cttgccattc
    25981 ctcacaaaaa cctaaaccaa aaagttgatt ttttcttgaa ctaacgcttt ttatagtgat
    26041 tttttgggta caaatttcat tttctttagg atttttactt ggatttaaat tttcaatttt
    26101 tttaggtaaa agaagcgcta aatcaatagc acttctaatt tttaattttt taaaaaattc
    26161 aaaatcactt tctttaattt tcattttgta tgcttgcaaa acttatattt aaaagctctt
    26221 gatgtttttt aatataagca tttatggttt caagtttaac cttttccata agttttaact
    26281 cttctttata atatcccaaa tttaaacctt gataaaattc gttaaaagac atagataaac
    26341 gcttgcttaa gctttcataa cgcaaaggag ttgatcctat gagaaaattt ttagcttgat
    26401 caagttcatt ttgagtcatg ccatttttta taaaatcttc aaaaagctct tttacgattt
    26461 ttttagcttc tttagcgctt tcatttttag tttgtaaata tccaaaaact ctagaaaaag
    26521 acatattcat atcaagcata gcataagctg agtatgcaag acctctttta acacgaattt
    26581 cttccataat ccttgaacca aatcctcctt gccctagcac aaataaggca atttttgcaa
    26641 gatataaatc cttatcttta aaatcagcaa aaaaaggcgt agcaaaataa atataagctt
    26701 gttcactttc tgggcgtacc aaaatttcat ctttgatgtt tttgcctaac tcatattttt
    26761 ttggagtatt ttttttgcct atttgaagtt ttgataagag ttttaaaaga tcttccttgg
    26821 cttgtttttc ttctaaatct cctcctaaaa tcacaaccaa atcactaaga tggataaaat
    26881 ttttataaaa attttgcaaa tcttttaaag acaaagtttc tatacttttt tcatctccat
    26941 catttggact ttgaaattct ttacatttaa aaatttgagc attgagtaaa ttttttgcta
    27001 aataatcaaa atcactattt ttactcgcga gctcacctaa ggcattgatt tttaattttt
    27061 gcaaagtttt ttcttctatt cttggtttta aaagcaattt ttctaaactc tttaaagcaa
    27121 aatcaaaatt ttctttcaag caagaaagat tgatttccaa actttcaaaa ccactacttg
    27181 cctctaaatt tatcgctcta aattctaaat ccttaaaaaa tttatcatcc acgccttcat
    27241 ttaaaatacg tgaaaacatc ttagctaagc ctgctatttc atcataactt ctagcacaat
    27301 ttctaaaaac aagctttaaa acaacaatag gaaaatcaga atttttttca aaaataaaag
    27361 ggattttaat acccctactc tctaaatact gcattaaaac ctttctaaaa tttcataagc
    27421 ggtattgcgt ttagctggat tttcgcctaa acttctaatc agccttatca tctcatcttg
    27481 attcattcta taacttgctc ctgcagcact tactacattt tcttccatca tagttgagcc
    27541 taaatcattg gccccaaatt ttaaagcaag ctggcctata agtgagcctt gagttaccca
    27601 agaactttgt aaatttttaa aattatctaa ataaagtctt actaaagcta aaagtcttaa
    27661 atatttgtta gaactttgtt tcataatctc tggatgtttt tggattaaag cagtattatc
    27721 actttgaaag ctccataaaa taaaagctct aaatccccct gtttcatctt gtaattttct
    27781 caaatgctca aaatgatcga tgatttcttc atcattttca accgttccaa acatcatagt
    27841 agctgtactt ttcataccaa ttttatgagc ttggcgatgt acttctaacc aagtagctgt
    27901 atcacattta tttggtgcga taatatcacg caccctatcg cttagcacct cagcacctgc
    27961 tcctggtata gaaaataaac ctttagcttg caatcttttt aacacttcag tgattgaaat
    28021 tttagatgct tttgcaatat aagcgatctc aactgctgaa aaaccatgca cagtgatatt
    28081 tggataatgt tcttttatcc aagaaactaa ttcttcatac cattctattt ttaattttgg
    28141 atgcaccccg ccttgaaaaa gaatttgtgt tcccccgata gcttcaagct cttctatctt
    28201 tttgcctatc tcttcaaagc ttaaaatata agcatcatct tctttatgat ggcgataaaa
    28261 agcgcaaaaa gaacaatcaa tacaacaaac attggtataa ttaatatttc tatccacaac
    28321 aaaagtggtg attttttcag gatgaagttc taattttctt ttataagcca tttctccaag
    28381 ttctgttaaa cttgcatggt gtaataaatc taaagcttct tttttatcca gtcttttcaa
    28441 aatttttcct tgttttttac ataattaaaa taattatagc atttaaaata taaattatgc
    28501 tatagtttcg cttatgaatt acattgaact attaaaaaat aataaaaata tcagaatatt
    28561 agcttcggtt cagtttatag tatattttgg agcatggttt tctcaaacgg gagtttttac
    28621 ccttttagtc gaacttaatg ctcctacttg ggcaacagct acaagtgcta tgcttgcttt
    28681 tttacctgga gttttacttg ctcctattaa tggcgtcata gtagagaaaa ataaacctaa
    28741 aaaactttta ctcagtatga ttagcataga attaatttct attttttgtc ttatttttgt
    28801 cacaagtctt agtatgcttt ggcttttatt tattttaatt ttcataagac tttgtgttgc
    28861 ttcgatttat tttcaagctg aaatgagttt attggccaaa attttaactc ctcaagaact
    28921 taaactcgct aatgaaatgc acagtgtcat ttgggcgatt tcttatacag caggtatggc
    28981 aagtgcggga atttttattt attttctagg agttaaaacc gcttttctat ttgactgtat
    29041 acttatactc ataggcattt cttttttagt aagattaagc attcctgatt ttcatcaaaa
    29101 aacacaaagt cgctttttta ccatgataaa agaaggattt ttctatgttt taaacaataa
    29161 gataattttt catcttatct tgcttcacgc ttttataggt ttaactgctt atgaaacctt
    29221 ggttacgctt ttagcgcaac atcaatataa agaagtttta tctgctgctt tagtaatagg
    29281 gtttttaaat gcagtacgtg cttgttcttt agctatagga cctatggttt taagcaaatt
    29341 tattaatgat aaaaatttat tttacatgta tcttggtcaa ggcttgggta ttatactttg
    29401 ggctttaact caatttaatt tttatatttc ttttttaggt ttaatcggtg caggtttttt
    29461 tacctcagcg ctttgggctt acacctacac tatgatacaa aaaaatgccg acaaagaata
    29521 tcatggtaga gtgatcgctt atacagatat gatttatctt agttttagcg ctattatttc
    29581 aatgcttatg ggctttttat ttgaaatagg cttgagttta gaactaatta caggcttatt
    29641 gggtatgatt tttatctttg cggcatttta ttggaagtgg ttttataaaa aatatttgtg
    29701 aaaattcaca aatattttaa attttaaaca aatcttgaag atttttcatt gcttcttcat
    29761 tgctgatggc attatttagc tgcgatgagc ttaattcatt gagctctatt tcataaccac
    29821 ttaacataga agcaaggcga atattaatac cattttttcc tatagctttg cttttttgtt
    29881 cgctatttaa acttacaata gcttttttat cttcaatttt tacagaattt acaatagcag
    29941 gagccaaggc acgagaaatt aaaatttcac tctcatttgt aaattctata caatcaatat
    30001 tttcattatg aagctctttg cttaccgcat taattcttac acctttaaca cctactgtag
    30061 ctcctacagg atcgatattt gttccattgg cctgaagaat gatttttgct ctttcacctg
    30121 gaattctagc acatcctata atattgacat aaccatcttt gatttctgga acctcagctt
    30181 caagtaaaca ttctaaaaat ttaggacttg tacgactaag ctcgatttta atacccttat
    30241 ctgtataaac acggcgtatc acagctttta ccacatcacc tattttaaac ttttcccctt
    30301 taatgcgatt ttttctcggt aaaaaagctc ttaattcatc tatttcaata aaagtatttt
    30361 cttcattatc cactctaaca actgtaccaa aaaccatttg ccctactttg tttttatact
    30421 tttcaaaaat agtttgttct aataattttt gtatatgata ttcaagttct ttatgcaagg
    30481 tatttaccgc agttcttcct aaattttcca aagaacattc ataggttaat tcatctccta
    30541 tttcaacatc tggagcttct gattttgcct tacttaacgc gataaaactc tcacttttat
    30601 tttgcaatct ctcgtcatta tctgctacta tggtaatttt ttgataaaga tttaaatttt
    30661 taggatccac aaaaaactca tattcttgtc cataaattct ttttgcagta ttgattaaag
    30721 cggtagctac cttttctctt acattctcta agtttaaatt tttttcatta gcaatagatt
    30781 cgataatatc tgctatcttt tccatatttt ataaaacctt ttttgtggga aatttaaata
    30841 atgtagataa aaattatatc cttaataagt ttaattaaaa gtaaaatttg ctaaaattat
    30901 agattaaaat gaaaattctt aaggatttag ctatggaatt aaaattggca agaactttga
    30961 ttaatgaaaa acctaaaaat attagcctag aaaaaatcga agaggctata gaaaaagaag
    31021 gacaaaagtt tttttatttt gataaagata atacacacaa acaactcatt gcccttgtaa
    31081 atcattttga aaaaaaagga gtaagcattt atcatagaac cgtaaaatac ggacttgatg
    31141 ataatgattt tatgtatgag gtacatattc tttgagtgct aaaaaacttt ttatccaaac
    31201 tttaggttgt gcgatgaatg tcagagattc tgagcatatg atcgcagaat taacacaaaa
    31261 agaaaattac gcactaacag aagatatcaa agaagcagat cttattctta ttaatacctg
    31321 ttcagtgcgt gaaaaacctg tgcataaact tttctcagaa gtgggtggct ttgaaaaagt
    31381 taaaaaagaa ggtgctaaaa taggagtttg tggatgcact gcatcacatt tgggaaatga
    31441 aattttcaaa cgtgctcctt atgtggattt tgttctaggg gcaagaaata tttccaaaat
    31501 cactcaagct ataaaaactc caaaatttat gggcgtggat atagactatg atgaaagtga
    31561 atttgctttt gcagatttta gaaatagtat ttataaatcc tatattaata tctccatagg
    31621 ttgtgataaa cactgcactt attgtatagt gccacatact agaggagatg aaatttccat
    31681 accttttaac atcatctaca aagaagctca aaaagctatt gaaaaaggcg ctaaagagat
    31741 tttcttgcta ggacaaaatg tcaataacta tggcaaaaga tttagaaacg aacataaaaa
    31801 aatggacttt tcagatcttt tagaagaact tagcactata gaaggtttgg aacgcattcg
    31861 ctttacaagt ccacatcctt tgcacatgga tgataaattt ttagaagttt ttgccaataa
    31921 tccaaaagtt tgcaaatcca tgcatatgcc tttacaaagc ggctcaagtg aaattttaaa
    31981 agctatgaag cgtggctata ctaaagaatg gtatttaaat agagctttaa aacttagaga
    32041 actttgtcca aatgttagca tttctacaga cattattgta gcttttccag gggaaagtga
    32101 aaaagatttt gaagagactg tagatgtttt ggaaaaagtg cgttttgaac aaattttttc
    32161 ttttaaatac tccaaacgcc ctttaacaaa agccgcaacc atgcctaatc aaatcgatga
    32221 agaaatagct tcaagaagac ttagcacctt acaaaatcgt catagtgaaa ttttagataa
    32281 aattgtaaaa aaacaagaaa ataaaacttt taaagtttta tttgaagaat taagagcagg
    32341 caatagcatt gctggaagaa cagataataa ctttttagtt caagttgaag gtagcgaaga
    32401 acttttaggg caatttaaag aagtaaaaat aactaatgca aagcgtatgg ttttatatgg
    32461 ggaaatcgtt taaaatccat tgcttaacat atataatttt catcttacaa tggcttattt
    32521 ttttaagctg taaaaagcac tataaaggtg aaaaagttga ccgtaaagct ggtgtgatac
    32581 ttttttggca tggaaaatta gcactcatgc cttttgcgtt tagacattat agacaaaaaa
    32641 ataaaaaagc ctatgtcatg atctcccacc ataaagatgg agagcaaatt gcaaaaatca
    32701 tcaagctttt cggtcttgat actgtaagag gaagcacttc aaggggtgct agcagtgcac
    32761 ttagagctgc atttaaagtt ttagaacaaa atgacgatat agttatcacg cccgatggtc
    32821 cacgagggcc ttatcatagt atttcagatg gttctatcat tttggctcaa aaaaaagaac
    32881 taaagataag aattttaaac tatgaagcaa atcgtttttg gaaatttaaa agttgggata
    32941 agatgatctt gccaaaacct tttagtaaga ttacttatag tctaagtgaa cctttggata
    33001 ttttatcttt agataaagaa aaagctaaag aatttctaat gaaacaattt gataaaatta
    33061 gcttagctga tcaatttaag gaatgaaatg ttatttttac ttaaaaaaat atttccacaa
    33121 ctttttatta gtattatttt agaagataaa aaaaatattg taaaagcttc tatttataga
    33181 ggaaataaac taatcagtag caatgaaaaa acttttgata aaagtgaaaa tttattagag
    33241 tacataaaaa atttaagcaa gcatttctta ttttaccaca ctgctttatt tttagacgcc
    33301 aaagaacaag gattaatacc tagtacaaat attcaagatt gtgagcactt taatatagga
    33361 aaaatcagct tacagcatat tttgcttaat aatgcccttg tttatacggc taccgaacat
    33421 gtagaatatt atagcgagct ttttgaagaa tatagaggtt tagatttttt atattcccct
    33481 tttgctcttc tttactacaa tatgcaaaaa gaaaaacagc ctgatgatca aattttactt
    33541 tatggattta agcaaggata tcttttggca attattgttg ctaaaggcaa tactatttta
    33601 tacggtgatt ttaaaatatt tgagcaagaa ttaggtttag agcttgaact tccatcagaa
    33661 gataatcaag aaattgaaaa caacaacgat gatactgaag ttaccttaga taacttcaat
    33721 gaagccttaa ataataaatt tgatctactt gatcaagaaa ataatcttga aactttggat
    33781 aataatgata attttaatct tgatgaatta aatcaattta gcaatgatat ggaactttgc
    33841 cgttatatta ttacgagcat tgaaaaattt tataatgatg ataaatatgc tggggtattt
    33901 atcaatggta ttttattata tagcgaatca gatattaaca taaatgctat tgatttttta
    33961 gaaagtgaaa cttttttaga gataaaaacg aaacaaatca acaccttaga tcttatgata
    34021 gaattgatgc gaaaggaggt taaatgactt atagctttat acagccaaga aaaaaaccta
    34081 ttttcacact ctttgataaa atttggctag gactttttgg ttttagtata ttatttatct
    34141 tactagtata ttttacatat acaataaaaa ttgcattaat caatagctct atcgatgatg
    34201 aaaaacaaca agttatagtg cttcaaaatc aaactaagca aaatgaaatg ctttatgaaa
    34261 ttttatttga tcaaagccaa atagcgaaaa attttaacac tcaaaatcaa attgttaaag
    34321 aaagcttaag aaatctattt gatattattg taaaaactga taatattact cttgaaagtg
    34381 ttgaacaaga cgaatattcc ttaaaactta tcggagtcac tcctacaaga gaaatgttta
    34441 ctctactttt agaaacccct ttaaaaagca tctttgatca aagctacaca acctattatc
    34501 gcttagataa tgggtggtat cgttttgtta gtattagcaa acaaattcca ggagttgcag
    34561 atgaaagata aaagcctaga agaaattgat ttattaaagc ttatcatttg cgcgttaagt
    34621 tttataagcg tttgcacagc cttgatctta tttttacttt taccgacatt aaaaaattac
    34681 aaacaagcaa atcttagaga aaattcacaa cttgctatct taaaagctgc taaatcaaaa
    34741 tttgacttta gcgaagataa aatatcaact ctaagaagcg aaaacaacaa aagtttagag
    34801 caatttgagc aaaattttaa tataggaaat tttaatattt ttttacaaaa atattttcaa
    34861 aatgtaaaaa ttcaagaaac taagcccgaa aaacaagaaa aatatctaaa aaaccgctta
    34921 gccattaaag cgacaatgaa taatcctaga agactttatg attttattga tgctctaaaa
    34981 aactataata atttaatcaa gcttgattat ccacttaatc ttaaagcagg agagcaaggt
    35041 atctctatag atcttactct caaagtttat tcaagctaaa ctcacatctt cgccttttaa
    35101 aatttgattc atagtattca ttgcacacat ttttccacac atggaacatg agtttaaatc
    35161 atcagggcga cgctcattaa acattttttt agccttttct ccatcaatag caagtttaaa
    35221 cattttctcc caatctatct cttgtctagc cttactcatc tcatcatctc ttgctctttc
    35281 ttttggaagt ttagctatat ctcccgcatg agctgcaatt ttagtcgcaa ctataccctc
    35341 tctaacatct tctaaatttg gaagtcttaa gtgttcagca ggtgttacat aacacagcat
    35401 atcagcaccg ctagctgcag ccacagctcc tccaatagca ccactaatat gatcataccc
    35461 tgcgccaata tctgttacca aaggtcctaa gacataaaaa ggcgctcctt tgcataaacg
    35521 cttttctaat tgcatatttg cctctatttc attaatagcc atatgccctg gaccttctat
    35581 cattacttga atcccaacat cccaagccct ttgagtaagg agtgataatt ctataagttc
    35641 tgaaatttgt gccccatcac ttgcatcgtg agtagagcca ggacgcaaag catcgcccaa
    35701 agataaagtt acatcatatt ttaaacaaat gtcaagcaaa tcatcataat actcaaaaaa
    35761 aggattttca gcatctttca tcatcatcca agcataaagt acagagcctc ctcttgaaac
    35821 tatatttgta agtcttttac tttgtttaaa aatatgcgct gcgcgagaat taatacctgc
    35881 atgaattgtc ataaaatcaa ccccactttt agcatgatga tatacaacat ctaaaaagtc
    35941 tttggcatta atttgcttta aatctttttc taaaaatcct accgcatcat atacaggaac
    36001 tgttcctatc atagcttttg aaacattaac aagctcgtct ctaaaacgac ttgttttgcc
    36061 ataattgctt aagtccataa tcgcttctat gccaaattta tgagcaagct ctactttttt
    36121 catttcctcg ctataatcaa cgcaatcatt tgaaactcct aaatttacat taaccttagt
    36181 acgcagtcca aaacctatac catttggatc aagactttta tgattaatat ttgcagggat
    36241 aataatttta ccgcaagcaa tattttcaag caaaaaatct ttacttaaat tttctttttg
    36301 cgcaacaatc tgcatttctt tagtaaaaat accttctttg gcataattca tttgagtttt
    36361 cataaattta tcctttaaaa aatttggata aatgaagggt gagtataaat ttttaaagta
    36421 ttgaaattta taaatcttcc cgacgctggt attatccaga tccggttcgg tctaagcttt
    36481 tagcttactc tcagcctgtt acacaagctc ccgtcattta tgttttaatt atacacttta
    36541 aatatttatt tttgctttat acgtgcagtt tttgtaaaat ttataagttc ttctgtagtt
    36601 tttatatgat aaggaagttt tccaaggcaa tatttaaaaa tttcagcagc tgccaaagca
    36661 tcatctaagg ctctatgatg catattttcc acgccaagaa attctttcaa aacctctagt
    36721 ttatattttg gactttctat acaacattgt gcaaattcta tagtgcaaat acgacgatta
    36781 agcaaaatgc caaaaccaca ctcatttaaa gccttagaaa taaaactata atcaaaacgc
    36841 acattatgcg ctacaaaaat actgtctttt aaaaaaagcc taaaatcact taaaaccttt
    36901 gctaaacttg aagcattttc caccatctca taagtaatac ccgtaagttc agttatattt
    36961 tttggaattt cttttacttt aacaaaactt tgaaagcgtc caatttcttt agaattttga
    37021 atttttaccg ctccaatttc taaaatttcc cccttgctca ccccaccagt actttctata
    37081 tccactatgc aaaaaatttc atctttaatt tttgttgtgc gtgttttaag agtaaaaata
    37141 ttatctttat ttaaagttaa acctaacccc aaaagctcaa aagtttctaa atctaaatca
    37201 aaatttttta attcttcaac tttggcaaac tcttgcatca cccaatcata aggcttgctt
    37261 tgcttattta atatagaaat aatctgatca atttgctgta aactcaaaat tcaagcttta
    37321 aagatgaaat tgcagtttta taatcattgg aagaaaaaat ataacttcca gccaccaaaa
    37381 tatcagctcc agattcttct aaatcactag catttaaacc attaacacca ccatcaacct
    37441 ctataaaaac tttagcattt tttttatcaa tcatttggcg caattctttg attttttcat
    37501 gtatcaaagg taaaaatttt tgcccaccaa atccaggatt aacactcatt aaaagcacca
    37561 tatctacaaa ttctagcatg tgtttaatag aatcaatagg agtatgtgga tttaaaacaa
    37621 tagcaggatg gattccttga cttcttatat attcacaaag ccttatagga tgaacttcgc
    37681 tttccatatg aaaagagata aatttcggtt ttaaagagat aaaaagatct acaaatttac
    37741 ttacatcttt aaccattaaa tgcacatcta atggcaactt actaatagtt gaaatttttt
    37801 cgatcacgca aggtccgaaa gtcaaatttg gaacaaagtg tccatccatt acatcaatgt
    37861 gtaaaagatc cgcacctgca gcttcaatag ctttaacttc ttcttctaat ttcaaaaaat
    37921 ttgcagacaa taaacttgga gctacataca tgatcaaaac cttaaactat atataaatgt
    37981 gataaataat attttatcga cttatatatt aaaaaaacta taaattatgg aatattttaa
    38041 gcttaatttt gataaaatct ccatttaaaa attttcataa ggacaaaaaa atggcaagag
    38101 tatgtcaaat cacaggcaag ggtccaatgg tgggtaataa tgtcagccat gctaacaata
    38161 aaacaaaaag acgcttttta cctaatctca gaacagttcg tgtaacttta gaagatggca
    38221 ccacgagaaa aatgagaatt gcagcttcta ctctaagaac tctaaaaaaa caaaattcta
    38281 aataattttg aggatttatt cctcaatttt aaaatttcca atttaaaaat aaactttaac
    38341 aaatcactta tataacacac atttaaaaat tattattaat tttattattt tttaagctaa
    38401 aaatatcttt taatagtgta aaatacctta ttaaataaat tttaaatttc actaatacaa
    38461 ggagagttta tgctacatga atatagagaa ttaatgtcag agctaaaagg taaagatgct
    38521 cattttgata aactatttga tcgtcataat gaacttgatg acatgattaa agatgcagaa
    38581 gaaggtagaa cttctcttag cagcatggaa atttcaactt taaaaaaaga aaagcttcat
    38641 gtaaaagatg aacttagcca atatctagca aattataaaa aataaggcaa aacaatgttt
    38701 ggaagtaaaa taaaccattc tgatcttcaa aaacttgaag aagaaaataa aaatcttaca
    38761 cataaaattg aaaaatttca atcggaaaat ttagaattaa aaaataaaat tacatcatta
    38821 gaacaagcgg ctttagagtc taaacttaaa acagatcttt taaatgtttt attaactggg
    38881 gttttaaaaa atattactat tattcaaggc gatatgttag aaaatgtaaa taaggcagaa
    38941 gttatctcta gctattctaa aacttctctt gctgaaatgg atgaacttaa ccatattgct
    39001 aattctatca atgcctcttt gggaaatatt acagaatcag ccaataaaac aagagatgtt
    39061 gcaggaacat tgcatagaag tgtagatgaa attactaatg taattaatct aattaaagat
    39121 gtttccgatc aaaccaatct tttagctctt aacgctgcca tagaagctgc acgcgcaggt
    39181 gaacatgggc gtggttttgc tgttgttgcc gatgaagtaa gaaaactagc tgaaaaaaca
    39241 caaaaagcaa ccacagaagt tgaaatgaac atcaaccttc taaagcaaaa tgcaaatgaa
    39301 atgtatactc aaagtgagca agttgaaaaa atttctatag attctaatgc tcatattatg
    39361 agtttttccg aaaaatttac tcacttagta aatgaagcgc attctactaa ttcaaatgca
    39421 gttggtatcg cttcagaagc tttcgtatct ttagcaaaac tagatcatat agcttttaaa
    39481 ttaaatggtt ataaagaaat tttttccaaa tcaggaaagc aattagccga tcatacatct
    39541 tgtcgcttag gaaaatggct tgctagcaca ggaaaagaaa gatttgggca aaataaaagc
    39601 ttcttaaaaa ttaacgagcc acatgaaaaa gttcatgaaa atatgaataa tgctataaca
    39661 atagcaaata cagaagatat tagcaaagat attactcaac acagcataat taataaatgc
    39721 gaagttgctg aaaatgcatc gcttgatctt ttcaatgtat ttaaagaaat gcttgatgag
    39781 tcagatcatt aaaatcctag gttgaacctt tttaaggttt aacctaaata atctttaatt
    39841 ttccccactt ttcctttaaa aaccacatat aagcaaaatc aagcaaaggc gttcttatca
    39901 tatttttaca ttttttttca aaatcctgca ccttaacata aacagcttca atctcttcat
    39961 catcaactcc acctccagaa gaaattttat ctttttcatc aacttctacg aaataaaagc
    40021 tttgcttgct tacacctgaa ccaaaccctg tataaaaatc tcctattttt tctaaatttt
    40081 taggagcata tcctagttct tctatacatt cttcttttgc tatttcctct aaagataatt
    40141 ttttatccac aagcccagaa caaagctcta tagtatagcc catatcatca tcttttacat
    40201 aatctttatc atgcatttga tgataccaaa gtggtatacg aaattggcgt acaaaaataa
    40261 aactttctaa ttctttatga tacaaaagca ctgaaacact atctttagat tctataaaat
    40321 cccaagtgca aagcctacca ttactttcat aagcaaatct cttaggctta atataatttg
    40381 atttttcaaa agaaagttct tttaaatttt taaacgccat aataaaacct tttatttatt
    40441 tttcacattg tactttattt ttgctttttt gaaaatataa aggtgattaa agccttaaaa
    40501 aattaaaaat catatttata acttaaccaa aaacttcttc cttctgtata atcttgatag
    40561 cgatttgcat atccagcagg attagcccca tcccatcttg taacttgcgg atcaaagaaa
    40621 tttttatcaa aaagattttg cactgcaaaa cttaagctag attgcttatt gattttataa
    40681 tttatcccta aatctactat ataaaaaggc ttatattttt gccatggcaa actaccatta
    40741 ccaccaactc ttgctttagc tatagtatcg agtcttgctc gtgtttttat ataggaatta
    40801 aatttacctc gctcatagtt taattttaac attgctatat gccttggtaa attttctatt
    40861 ctatcaccac caaaccaatt tttttgacta tctttatagc gattatccat aaaagtataa
    40921 cttgaattta ggctaaaacc attgtaagtt ttggtattaa atgcaaattc tataccttta
    40981 gtctgtgttt ttccaagatt aataggacgc ttacaaacag tgccattgct acaattaata
    41041 ccattttgca tacctgttaa atattcacta ctgatttgat ttgtaaaatc agtaataaat
    41101 cctgtgatag aataatgtgc aaaatcaaat accctaaaat cagcacccaa ttcataattt
    41161 atactttctt ctggttttaa gtcagggttt ccaaaaagag cattgccatt ggcataatta
    41221 taatatccat ttgtcaactg cttggcagaa ggagttttat agccttttga aacacctcct
    41281 ttaaaggcta tattatcatt taagtgataa accaaataaa tcctaggggt aaattcagaa
    41341 tcaaacaaat tgctataaat ataacgcaaa cctgtagtaa aaatcaaatc atcggttata
    41401 aaatactcat tttccccata aagcgcaacc atggtttgat caagattttt acctcttatt
    41461 taactacctg cgcttgcttg atcatttttt aacatctcat aatcaatcct tgcaccaaag
    41521 gtatttacta aattaccgta ttgacctaaa ttccaaggta aaacaacctt accttctcct
    41581 acccaaattt gactatgtaa ttccttatcc ttagtgctac catattgtaa atatgagtta
    41641 gttgaatcaa aatcatagtt accatcatga tttaaaacaa tattatcctt aaaaagttgt
    41701 ttttcacttt taatagccct actacttata gaattcactg aaatttcatt aatatatcgc
    41761 tctatatcaa aatatatatt atttttatca tctactgtcc aattaagcct agaaccaaaa
    41821 cctaagctag taaaagcacc tggactatga atagcaattt ggtaattatc aggtctttgt
    41881 tggtaattat caggtttttg attgttatta ttccaaaccg gtgtaggcca ttttaaatca
    41941 gaagctgcct tatcataata cttcaacctt gcagaaattg ataatgtatc ttcaatcaaa
    42001 ggagttgcta cataagcatt aaaacgcccg cattgccata gtgattagag tgctgttgca
    42061 aaagagtatt aaattctata tttgcttcga ttttatcagg atttttcttg gtgataatat
    42121 ttatcacacc gcctacagca tcactgccat aaagtgtaga agctggacca cgtataacct
    42181 cgatacgctc tatcatagat aaaggcggca gatatcctga ctcactgcct ttaaaaacat
    42241 tagtataaaa cccatttgca acactttgac gttttccatc aattaaaact agagtataag
    42301 aactaccaaa acctcgtatg ctaaaatcat aagtgcctgt tttatccata gtcacatcta
    42361 cacctggaat atctcctata gcctccccta tatccttaat tggctttttt tcaagctctt
    42421 cttttgtaat gatagaaata ctagcaggcg catcaaccaa atcttgttca aaaccactag
    42481 cgctaaccac aacatcatta agttgatatg tttcttctgc ttttaacaaa gctccagata
    42541 aaattaaaaa acacagtaaa ctttttttaa atttcatatt tttgatttga gtcaaattaa
    42601 ttcctttaaa aaaaattatt ttgatattta aaatcatttt tggagtataa aaaaagaata
    42661 cttttaatta acttaatttt gataacaatt ataaataata aaattattta aaaaagcgaa
    42721 gtaaaagcct aagcctcttg ataggctcca agctttaaaa ttttctgcat acgatttgca
    42781 gaaagttctc gtacatcaat attttcaagt tcatttaggg atttttttac ataatcagca
    42841 atagctactg ctgcagcttc tttattgcga tgtgcaccat ttgtaggttc gtctatcaca
    42901 tcatcaatta aaccttgaga ttttaaatca tcagctgtta ctttcatagc tttggttgca
    42961 gcttcacttt ttgcaggatc attccaaagt attgcagcgc aaccttcagg agaaattact
    43021 gaaaaaacag aatttttcat cattgcaagt ttatctgcaa cccctatagc taacgccccg
    43081 ccactaccgc cttctccgat aactatagca atggtcggta ttttcaaatc acttaattca
    43141 tataaatttc tagcgatagc ttcactttgt cctctttctt cagcacctat tccaggataa
    43201 gcacctggag tatctatcaa aaataaaata ggaatttgaa atttctctgc aagtcctgct
    43261 actcttaagg ctttgcgata tccttcagga tgtggcatcc caaaatttct agcgatttta
    43321 tcttttgttc cacgtccttt ttgctcacca attacaatta tttttttctc tcctaaataa
    43381 cccataaaac aaacaatagc aggatcatct ctaaaggcac gatcaccatg tatttcgtga
    43441 gcgtcattta aaataagttc aatatagtca agagcataag ggcgatctgg atgacgcgct
    43501 aattgcaaac gctgaaaatc acttaaattc ttataagttt tagaaatttc tttttcaaga
    43561 tttttcttta aaattgatac agcttcagta tctcctttaa tctgagcatt gataatgtcc
    43621 tcgtcaattt gctgaatatt tttttcaaaa tctaaataag aagccatatt aatctacttt
    43681 tttaaataca acacagccat ttgtgccacc aaaaccaaaa gaattactca tcaccacttt
    43741 taaatctact tttcttgata tatttggaat ataatcaaga tcacattcat catcttttac
    43801 aagctgattg attgtaggtg gaactacccc atctcttaaa accataacac taacaactgc
    43861 ttcaattgca cctgcagcac ccaagcaatg acctgtttgt cctttggtgg aacttataag
    43921 cgggatatta ttgccaaaaa gctctttaat tgctgctgtt tcatttttgt catttacagg
    43981 ggttgaagtt ccatgtgcat tgatataatc tacctttgga ttccctgcca tatttaaagc
    44041 ttttttcata gcccttaaag gcccatctaa agttggtgaa gtaatatgat gcgcatctgc
    44101 actttctcca aatccaatta attcagcata aatcgtagca ccgcgttttt tagcctcttc
    44161 atattcctca aaaactaaag ctccagcacc ttctcccatg acaaaaccat ctctttcttt
    44221 gtcaaatggt cttgaagcat gctgtggatc ttcatttcta gttgataaag ctttcattga
    44281 agcaaaacca cctataccca caggacaaat cgcagcttct gcacctatga ctaacatctt
    44341 tttagcattt cccaaagcta tacttttata agcttctcct atagcatgag ttcctgctgc
    44401 acaagctgta acacaagaaa tatttggccc tttaagtcca tgctctatag aaatcaaacc
    44461 tcctaacata tttacaagtg ctgaaggtat gaaaaaaggg gaaattttac gcggacctcg
    44521 ctcggaacaa ataatggaat ttttttctat gttaggcaaa cctccaatac cagaagccga
    44581 aacaatgcca aattcttctt tatctaattc ttcactaaat ccagcatcct gcattgcttc
    44641 tcttgctgct ttaattccaa gttgtatgaa acggtcaatt ttttttactt ctttgccatc
    44701 aacaacctct aatggatcaa aatttttaac ttcagctgca atttgaacag gaaagtccgt
    44761 agcatcaaaa agagtaattt tatttactcc gctttctcca ttgcaaattg ctttaaatga
    44821 actttcttta tctaaaccaa gggcattgat cataccaata cctgtaacta caactctttt
    44881 caagaataag ctccttgcaa gaaaaaaaat tattttttta gattgtcaat ataatttaca
    44941 acatcttcaa ttttaattaa tttttcagca tcactatctg gaatttctac ttcaaatttt
    45001 tcttctaaag ccataataag ctctacaaca tctaaagaat cagcacctaa atcttcaata
    45061 atttttgatt ccattttaac tgcatctgca tcaatactta attgctctac tactactgct
    45121 tttacatcat caaatgttgc catttgttct cctttaaaaa attaaaataa agcgtatttt
    45181 actataaaaa gcttaaaata tttatagttt ttcattatac ttgaaaataa aatattaaaa
    45241 cataaaggaa aaatgatgct tttctctaat ttaatcaaag aaaatcaaaa aatttggaat
    45301 gcttatctac atcatgattt tgttaaaaaa ttggaagata aaagcctaaa gcaagaaaat
    45361 tttctttttt atctcaagca agattatatt tatttgctta attacgcaaa atgttatgca
    45421 agattagcac ttaactcaaa tactgcaaaa gaacttcgtt ttgctatgaa atttcaaaat
    45481 tatatagttg aaggagaaat ggaacttcat cgtgcaattt tatctcttgg cattaatgca
    45541 gatgaactcg atataaaaga tgaaagttta gtcaatatag cctattcgcg ttatatgtta
    45601 agcgtaggtg aaaatggaga ttttttagat atgttagttg ctcttagtgc ttgcgctata
    45661 ggctatgcaa aaataggtgc tgaaattata aatcgtttaa aaaatgaaaa tttaaaagat
    45721 catccttaca aggaatggat tttgacctat ggaagtgaaa attttcaaaa tgaagctaaa
    45781 gaatttgaag attttgttaa ttcttatact tcaagtgttg gtgcacaaaa attccaaaaa
    45841 ctcagcgaaa tttttcatac tgtaacacgc ttagaagtgg ctttttggga gcattcttta
    45901 agaatggaat taaatcttta aacatgggct ttttgcccat gtttttatgc aattttactt
    45961 gcatcaataa tattataatc taaaccaacc atttctttag aaagtcctaa tgcaagtcct
    46021 actaattgtg ataaatgaat aataggcaat cttgctttag aattagtata atcttgaaat
    46081 ctttcttgat agatatcaag ctgcatttga caaagtggac aaggtgttac aacacaatca
    46141 gcttgatttt cacttgcatt attgacaatt tgactagaca tttttttcac agatttttct
    46201 gcaggataag aagcatgaaa accacaacaa tcaaggcgtt tttcaaaagg aactatttta
    46261 gcccctaaaa cttctactac actttcaaaa ctttttggat tggttgaact ttctttttta
    46321 ccgaaagcat cttcaggtct taaactatgg caaccataaa ataaagctac ttttaaattt
    46381 gaaagcggct ttttcacctt gctttttaaa ttatccaaat cctcataaag ctcccacaaa
    46441 agacttgtaa taggcgttga accttgatat ttcattccac cttgtgctaa aaaaatattg
    46501 atgcgttctt ttgcaccctt atcaagagta ttttttgctt tagttaaagt tagcatacaa
    46561 gtactacaag ttgtaagcat tggcattttc atctcttctg ctaaagcaat atttcttgca
    46621 ttagctacca aagtcgcaat aggatcaaca cactgcgctt gagaagcccc acaacaactc
    46681 caccccttaa tttcattcaa cttccaaccc aaaataggtg caatagcttc aagtgaaatt
    46741 ttagattctt ttgcagcttg agataaaaca caacctggaa aaaaagcgta ctctttttgc
    46801 atattttact ccttaacagc agcttcttgt gccgccttta tcattttaac caaatcttta
    46861 tacccttcta tttcaccctc gccaaaaaca tgcataggat tcatttttcc tgcacgcata
    46921 agtttaaaag ctatatctgt tttacccata gaacctataa caccctcaga acgcaaagca
    46981 agataaattt cattcaagcg tcctgaacct tcaactaaat ctttataaaa agcttcagca
    47041 tgatcaggcc ctaagccttc atttaaacct tttttaatcg ccatcactct taaatttgct
    47101 atatcactta ctgaacttat accctttgga caacgatcag cgcactcttg acaatgaaca
    47161 caaagccaaa gtccattcat tacgctgggt tttacatgca acataggatc cttacctcga
    47221 gagtccgccg ctgcacgcca aacatgagta aaaacaaaag gttgcatata atcgctacta
    47281 tctgcttcta atttattaca ctctgaagca cagctaccac ataaaataca atcccattgc
    47341 ttgctaatac gatcaaattc ttcttgactt tgtttacagc ccttttccgc tgaaaattca
    47401 ttttttgcca ccatggcagg acgaattttt cttaaatttt ctatagaagg ttcccaatcc
    47461 acaattaaat cagaaattac tctaaaattt ccaagcggag aaatgcgtat acttgaagga
    47521 ttatcatatt cttttaacaa atcttgcatt ttagtatcac aagcaagata agaatgccca
    47581 ttcacacgaa ctgcacaagc cccacaaatt gcagattgac aagaggcggt aaaatttaaa
    47641 gtaatatctt ttgttttttt gataaaaagc aaaagagaga gcagagtttt tccttgtata
    47701 tccttatcat caatatcata actttgttca tatttttcct tgccattaaa acgatctatg
    47761 ataattttca ttgtactctc cttccatcaa gtgaaaactc agttaccacg acatctttat
    47821 aactaagttt taattcatca ttttctaaat ttacaatgct atgttttaag aaatttttat
    47881 catctcgctt tggataatct tctctagtat gagccccacg gctttcaagt ctatttctag
    47941 ctgctaaaca agcacagcga gaaagtaaaa tcaaattacc aagctctaca taatctgtaa
    48001 aagcagtatt catcacttca ttaggatttg gaatacgaat tttttcatat ctcgcttgta
    48061 tatcttctaa tttttttgct agaagatcga gtttttcttg agttctaaaa atccccatat
    48121 tatcccaatt ttgacttcct agctcttctc gcaattcata catttcttga ccatttccgc
    48181 cattatttgt aatttcttta aatctaacct gccatttttg agcaagttca tgagtttttg
    48241 ccccttttcc aaaacttgca tctttagcat aatttgtcgc accaatgcct gctaaatgcc
    48301 ctgttacaac tgcatcggct aaagaatttc cccctagtct attagctcca tgtatagaaa
    48361 tgcaagaagc ttctccacct acataaattc cagcaatttt agtacccata tcttcaaatt
    48421 tagccacttc aattccaccc atagaataat gcgccgttgg acggataggt acaggagtat
    48481 ctactaaatc aatattttca aaaagcattg cagtgtgacg aatttttggt aaatctttta
    48541 aaattttttc ttttcctaag tggcgtacat cgcacaaaac ataagctcca agtccctcgc
    48601 cataacctct accttcacga atttctgttt ctatagcacg cgcaaccaca tctcgcggtg
    48661 caagctccat tttttcatgg taatttttca taaaacgctc accacgatta tttaaaagat
    48721 atcccccttc accgcgcgcc gcttctgtaa taagagttcc accatttgca actcctgttg
    48781 ggtgaaattg tatcatctca ggatcttcaa aaccaagtcc tgctctaaga gcagctgcca
    48841 caccatctcc tgtggcaata aaaggagttg aagttctatt ataaaatatc cttgtgtatc
    48901 cccctgtagc aatcaccaaa gctttgcata acacaggata aattccaccg ctttgtatat
    48961 ctcttaaaac gacaccctcg cattttccat ccacaacacc tatatccaaa agttcatgat
    49021 tcattaaaaa tttcacacca ctactaatag catcatctaa acaagaatgc attaaaatat
    49081 gacctgtttt atctgcagaa tagttacagc gtttcttaga agctcctccc attaaacgct
    49141 gagctactcc accttgctca tttcttgaaa acaaggttcc tataaaatcc atattaaaaa
    49201 tagcctttcc agctaattcg caaaatttta aagccgcatc ttgatctacc aaataagctc
    49261 cgcctttaat agtatcataa gcatgtaatt tataggaatc tccattagaa aaatcagtaa
    49321 ctccattaat tccaccctct gccatacaag ttgcgttacg cgatggcatc atctttgtag
    49381 ctactacaac gcttaatttt ggattttctt ttctcactgc ggctgcagca cacaaacctg
    49441 ctccacctga tccaattacc aaaacatcgc aagaaggtaa atttatatct ttatccatct
    49501 tagatgaatc atctaaagca taaactccac ttgaacttgc agctaaagct cctacactaa
    49561 tacaggctgt ttttataaaa tctcttctag aaaattcacc catatcattc tccttattta
    49621 aaaaaattaa taataatttt taatgtaagt caatcttaca taaccgcatg ccaaaaatcc
    49681 aaaaacaaac tctcctttca atataaaatg gattaaaaac aaatttataa tttagtaaat
    49741 ataaaaaagc ataagataag taa
//
LOCUS       DAPIVO010000003        49754 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.003, whole genome shotgun sequence.
ACCESSION   DAPIVO010000003 DAPIVO010000000
VERSION     DAPIVO010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 49754)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 49754)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..49754
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.003"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            1..993
                     /locus_tag="RJ239_000171"
     CDS             1..993
                     /locus_tag="RJ239_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopenicillin N synthase family oxygenase"
                     /protein_id="HDV7330332.1"
                     /translation="MNLPILDLQAYEKDKSTFLKNLREIASKIGFFYLINTSIDKNLN
                     EKLFKLGKEFFNLSRSSKELISMVHSPQFRGYTSEGFEYTAGSKDYREQLDIGTERDA
                     LNWNLNSPLWQRLEGPNLWPSEIPELKKTFLTWHKQTKKACLKLLKAFAQALDLPNNA
                     FDKLYGENSYEHCKIIHYPKSSKNITQGVGSHKDGGLITFVFQEKQSGFEAFIDGKWL
                     SIPPLENSVVVNIGEFLELATNGYLKATIHRVNLSPKERFSIAYFLGVQLDKDIPIFK
                     LNPELAKESKGVDTDPKNPLLRNVASNYFKRMIRSHPDVASIYHSDLIEKFSFA"
     gene            1004..1774
                     /locus_tag="RJ239_000172"
     CDS             1004..1774
                     /locus_tag="RJ239_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDV7330333.1"
                     /translation="MTLFTKAFCVATLFTGFAWANEELKVGSSITPHADILRFIKSAL
                     QKQGYDLKIYEFNDGVIPNVMVENGELDANYFQHEPYLKEFNQRQGTHLVKVASIHIE
                     PMAVYSKKHKEFHPKEGQSISIPNNPTNESRALRIVASKGLIEVKDNELITPLDITKN
                     PKKLKFVELKDAQLTRSLDDVDYSLINSNFAILAGLNPVKDGLYTESKYSEYGNIIAV
                     KEGNENLPKIKALVKALQSNEVKKFIEEKYQGALIPTF"
     gene            1786..4050
                     /gene="metE"
                     /locus_tag="RJ239_000173"
     CDS             1786..4050
                     /gene="metE"
                     /locus_tag="RJ239_000173"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HDV7330334.1"
                     /translation="MKNSIISYPRIGANRELKFAIEKYFKNQSSKEELLKSAKDLRIR
                     HWQEIQKAGIDFIPSNDFSLYDNVLDAAVLFNIVHTKYKNLNLDALDEYFAQSRGYQG
                     ENGDVTALAMKKWFNTNYHYLVPECDNADIIALTGDKIFKEYLEAKELGIESKPVLIG
                     IFTLFKLIAFKDEKTQKLAKEKLLNAYIELFDKLNELKVTWLELDEPYLVYDLSKEDI
                     ALFEEFYQELLNHKKDLKILLQSYFGDLRDIYPKLLESKFDALGLDFIEGKQSLALVQ
                     QYGFAKDKILFAGLINGKNIYANDYAKSLKLIKELQKYTQNIILNTSCSLLHVPYSTE
                     FESKLDSSYLKLFAFAKEKLQELKDLKEILNSSEENPLFRANQELFKNIPERLDEKVK
                     ARLKALKKEDFTRTPSFKERALIQKEFLKLPLLPTTTIGSFPQSADVRSNRLAFKQEK
                     ISAQNYTEFNQQKIKECIQIQEEIGLDVLVHGEFERNDMVEYFGENLKGFLFTQNGWV
                     QSYGTRCVKPPVIWGDVSRTKPITLAWSKFAQSLSQKIVKGMLTGPVTILNWSFPRED
                     ISLKESTEQIALAIRDEVLDLENAGIKIIQIDEAALREKLPLRKSDWHSEYLDWAIPA
                     FNLVHSGVKAKTQIHTHMCYSEFSDILKEIDAMDADVISFEASRSNLSLLDTLKAIRF
                     KTEVGPGVYDIHSPRVPSVEELSLTIEKILNKLPKEQIWINPDCGLKTRAYEEVIASL
                     KNLVTATQKIREQL"
     gene            4060..4908
                     /gene="metF"
                     /locus_tag="RJ239_000174"
     CDS             4060..4908
                     /gene="metF"
                     /locus_tag="RJ239_000174"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HDV7330335.1"
                     /translation="MCSFSFEVFPPRKDENIKNLHAILDDLGQLSPNFISVTFGAGGS
                     INSQNTLEVASLIQEEYQIPSIVHLPCIHSSKEKITQILQKCKEKNLNQILALRGDIC
                     ENLKKSKDFSYASDLISFIKKQEYFEIYAACYPEKHNESKNFIEDIHHLKTKVNAGTD
                     KLITQLFYDNEDFYTFKQNCALADIDIPIYAGIMPITNKRQVLKISQLCGAKIPPKFV
                     KILEKYENNTLALEDAGIAYACDQIVDLITSGVDGIHLYTMNKSKAAIKIYEAVKHLL
                     KEELHA"
     gene            complement(4930..5121)
                     /locus_tag="RJ239_000175"
     CDS             complement(4930..5121)
                     /locus_tag="RJ239_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330336.1"
                     /translation="MIYILEFFKGASLALMLFGALFFFFKYNSFFYLCLGIIPGLLLS
                     LIFVLLIENHKLKNENKLR"
     gene            complement(5118..5798)
                     /locus_tag="RJ239_000176"
     CDS             complement(5118..5798)
                     /locus_tag="RJ239_000176"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HDV7330337.1"
                     /translation="MKDLFLFSSLLDASHTFSYFFHIGLVALIAVIVAMMATRSMQLV
                     PRGMQNLGEAFLEGVLSMGRDTMGSEKGARKYLPLVATLGIIVFFSNIIGIIPGFHAP
                     TASLNLTLSLAIIVFVYYHFEGIRAQGFVKYFAHFMGPIKLLAPLMFPIEIVSHLSRV
                     VSLSFRLFGNIKGDDLFLMVILALVPYIAPLPAYVLLTFMAFLQAFIFMILTYVYLAG
                     ATVVEEGH"
     gene            complement(5867..7207)
                     /gene="radA"
                     /locus_tag="RJ239_000177"
     CDS             complement(5867..7207)
                     /gene="radA"
                     /locus_tag="RJ239_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HDV7330338.1"
                     /translation="MAKNKALFECQACGNQQSKWLGKCPDCGAWDSFVELKAEQIKVL
                     KELAQVSMKTSEAVCIEDVELEHFTRYSTDDNELDLVLGGGLVEGSLVLIGGSPGVGK
                     STLLLKIASNLAKQGKKVLYVSGEESKAQVKLRADRLEANTPNLFLLTELCLENILEE
                     LHKKDYSILIVDSIQTLYSNKITSAAGSITQVREITFELMRVSKAYNISTFIIGHITK
                     EGAIAGPRVLEHMVDVVLYFEGDATKEIRLLRGFKNRFGGTNEVGIFEMTAKGLISAK
                     DLANRFFTRGKAISGSALGVVMEGSRALVLEVQALVCESSYPKRSATGYEKNRLDMLL
                     ALLERKLEIPLGHYDVFVNISGGVKVSETAADLAVVAAIISSFKNRPLSKDSIFIGEL
                     SLNGEIREVFSLDTRLKEAKMQKFKNAIVPSKPLEDIGLKCFVAKELSQVLEWM"
     gene            complement(7207..8073)
                     /gene="ftsY"
                     /locus_tag="RJ239_000178"
     CDS             complement(7207..8073)
                     /gene="ftsY"
                     /locus_tag="RJ239_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HDV7330339.1"
                     /translation="MFNFFKKGLAKTLENIVGVKGENKKITKDLLEEILLEADVSYEI
                     VEEIIYYLPPQNEVKKEDLKRVMGSYFLYEKKETNQEKPFVELILGVNGAGKTTSIAK
                     LAYLYKNQNQKVILGACDTFRAGAIEQLKLWAQKVDVDIVLTAQGHDPSAVAFDTISK
                     AKAKDFDRVIIDTAGRLQNQKNLAHELEKIVRISNKALEGAPHRKILVLDGTQGNAGI
                     LQAKAFNELVKLDGVIITKLDGTAKGGALFSIARELELPIFYVGVGEQMTDLQEFNAS
                     AYLDTLLDPIFE"
     gene            complement(8073..8630)
                     /locus_tag="RJ239_000179"
     CDS             complement(8073..8630)
                     /locus_tag="RJ239_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDV7330340.1"
                     /translation="MKIKKILLLVAISCLFVACSNDKEKQQNDVNLSTEASINQSDDM
                     NFKLNLIDGGSISVKKENAVLNFNDEDKVTLFVFFTTWCTPCIAEIPHLNKLQEKYNN
                     DFNIVGVLLEDKSNDEIQKFIEQHKISYKVANGENNYLLAKALGGVNGIPTMFLYNKH
                     SKLINQYLGLIPEEMLEIDIQKAIL"
     gene            8713..9339
                     /locus_tag="RJ239_000180"
     CDS             8713..9339
                     /locus_tag="RJ239_000180"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HDV7330341.1"
                     /translation="MEKTDFRALQKIRLFKHSKLNFKQDYKIFKECLKIIKLFKAKNI
                     LIFIPLHYEPNLIKFRHILNKNYKLFVPFMQDKSLKIVKLRLPFIKKRFGVLEPIDSF
                     FKAKIDLAIVPVIGVDKNLKRIGHGQGFYDRFFENLNYKPHIIFIQSIDALSQNNLTQ
                     KHDISGKLYINPYKKYYKKERKNDRITYRTYSRYSRTRYRIFSCKKNQ"
     gene            9260..10813
                     /gene="rny"
                     /locus_tag="RJ239_000181"
     CDS             9260..10813
                     /gene="rny"
                     /locus_tag="RJ239_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HDV7330342.1"
                     /translation="MIESLIALIAAIVGLGIGYLVAKKINDAKYEIFVEQAKAKAKAI
                     EYEAELILKDAKNSILNAELEVKKKYEEKTHKFQKDFNQKFDDLSKKEQKLQQEEEKL
                     KEDKEYLCKSQKHIQNLQSDVDKLKNKYQEKLDDVLKILEHSTGLTQNEAKEIILKKV
                     EENSREQIAHIVRKYEEEAKNEAKRKANFIIAQATSRFAGEFAAERLINVINIKNDEL
                     KGRIIGKEGRNVKTLEMVLGVDIIIDDTPGAIIVSCFNLYRRAIATKVIELLVEDGRI
                     QPARIEEIHEKVCKEFDSAILEEGETIVMDLGLNKIHPEIVKLIGKLKYRASYGQNAL
                     AHSLEVAHLAGIIAAECGGDENLARRAGILHDIGKALTHDFEGSHVDLGAELCKRYKE
                     HPVVINAIYAHHGHEEATSIESAAVCAADTLSAARPGARREVLEAFLKRVSELEDIAK
                     SKEGIKNAYAINAGREIRVIANAQLVNDDESVLLAKEIAAEIQEKMQYPGEIKVNVIR
                     ELRAVEYAK"
     gene            10822..11379
                     /locus_tag="RJ239_000182"
     CDS             10822..11379
                     /locus_tag="RJ239_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDV7330343.1"
                     /translation="MQDMIDTLIKYGYIVLFFYSLGGGMVGILAAGVLSSQGKMDLSF
                     CIALAFIANTIGSTLLFILGKYYKKDIMPYFKKHRRKIALAMIKTKQHGIILLVTQKF
                     IYGLKTFIPIAAGMAKYNFIKFFIINTLASLAWAIVLGFTAYTFGYVIEAIFDKLSLY
                     PYAAPLFLLFLAGIIWLYLSKFSKK"
     gene            11379..12638
                     /locus_tag="RJ239_000183"
     CDS             11379..12638
                     /locus_tag="RJ239_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HDV7330344.1"
                     /translation="MSLWNSFSYSFKEFHYLFFSVVVIFIFNILLEYNNFLNFKNQKH
                     YLIDNALLTHQYIKYNKKNKKYWVLKLQTENFTFYTTSFKDLNLSKNQFLSLRIITHN
                     INFKDYLSKSFYAPSYDFEKLKEKEYNPIISYFLNQHTNEKIKEFYGALFFALPISLE
                     LRNDVNYYGIAHLIAISGYHIGLLFSLIFFILAPIYSFFQKRYFPYRNLRLDLSILIF
                     ALLLAYACLIGFVPSFVRSLIMAFWVFYLLCKNIKIINFVTLFCSILLCISLYPRLLF
                     SIGFLFSILGVFYIFLYMHHFANKFNNLINIILLNIWTFFAMVLPVLYFFPLISYQQI
                     LGIILSGIFVIFYPLVLFLHLINYGDLLNFILDEFFKFKIYGTNIHIPFWIFISYLIA
                     SLISVRFKYLAFLCIFANFIPFIMIVI"
     gene            complement(12582..13388)
                     /locus_tag="RJ239_000184"
     CDS             complement(12582..13388)
                     /locus_tag="RJ239_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HDV7330345.1"
                     /translation="MKNFFTILLNLRDKEILNYAAALSFYTVLSLIPILFVCFSVFTQ
                     ISSFKAYYEKAKQVIFAFLIPTQQDVVATYIDTFLKNSVNLGIVGLIAMAFTSLAFFS
                     GYDFVINRITKNEPKGLWQSISSYWTLLTLVPLGLGLSFYISGFIQQTLDDYKIGFNF
                     FEILPFVIIWGLFFISYSSSVHKGTLKSLALVSFGAGTIWYIGKNLFVYYVVYNKTYA
                     SVYGSFSTILFFFIWIYISWIIYLFGLKLYYFLNHNHNEGNKIRKNTKKS"
     gene            complement(13392..14774)
                     /locus_tag="RJ239_000185"
     CDS             complement(13392..14774)
                     /locus_tag="RJ239_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HDV7330346.1"
                     /translation="MKKEFEQYFKRFLGEENAYFDEIHKRAYSYDATKKHYLPDGVLF
                     PRNEEDIARILKFCNENNIIVIPRGSGSGFTGGALAVNGGVVLAFEKHMNKILEIDLE
                     NLVAVVQPGVINIHLQKEVAKYGLFYPPDPASMEYSSLGGNVSENAGGMRAAKYGITK
                     DYVMALRAVLPSGEIIRAGKRTIKDVAGYNLAGILIASEGSLAVLSELTLKLIPLPKF
                     KKTAFAIFPSVKSAMNAVYKSLASGVSPVSMEFLDNLSIRAVESKFNKGLPIEAGAIL
                     IADVDGNVKEAIDEDLRNLEHYFLEAGASEFKIAKDEQETADIWFARRNCSQSIAMYG
                     TLKLNEDITVPRSKLPTLLEGIDEISKKYGFKIPCFGHTGDGNVHTNVMVPDKNDKEQ
                     VKKGYEAVEEIFKLTVKLGGTLSGEHGIGLSKAPFMNLAFSEAEMNLMRNIKKAFDPN
                     NILNPFKMGL"
     gene            complement(14777..15502)
                     /locus_tag="RJ239_000186"
     CDS             complement(14777..15502)
                     /locus_tag="RJ239_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasminogen-binding N-terminal domain-containing
                     protein"
                     /protein_id="HDV7330347.1"
                     /translation="MFKTIVCFLALNLSLFAVGFDLKPIKSELVKVDDIYGYIKDSDD
                     IKLYSSGVVVQHFSNSQSIIARASVIDKKNGLAKLEFSVFSALKQDALPLPNVLPKVG
                     DEVVLNFLYDRGLVIAPDEQTYNELVREFPQIYFTHIDIFGAQLIRTATLSPKRSDFR
                     QFCDDNAVGILVVALENHAEVVDCQDFNKLYEVPISKPTSVQVPFYSRIGGYKSNFFD
                     FNSQEIGNYYRYYDALINLPKVQ"
     gene            15624..16784
                     /locus_tag="RJ239_000187"
     CDS             15624..16784
                     /locus_tag="RJ239_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDV7330348.1"
                     /translation="MKKLLLLFIFVVQSFAALSVEELTWDNGDTLLKFLQRNSIPMSL
                     YYGLDREDQELASDIAYKIKYQVLKDENNNIEQVLIPISDDLQIHIYKDKDGQYTLAF
                     TPVSYQKEDRILHLTIKSSAYQDVYEESGSSTLARAMVRAFRGSINFRNIQKGDEVTL
                     YYEQKRRMGKLWGDINIKMAMVEINKSAREVFSYNDIFYDRDGKELESFLLTKPVNYT
                     RISSPFTTARYHPILKRYRAHLGIDYAAPTGTPVKSAGKGVVTFIGTKGGYGNVIQIK
                     HDSGYMTLYAHLSRFAKIKNGQKVNQGQVIAYVGSTGMSTGPHLHFGVYLNNKAINPA
                     SVVKIAKSELSGKAKENFKHIIAGYEQVVKEALASNQPNPPKEEDFENYIEF"
     gene            complement(16781..16984)
                     /locus_tag="RJ239_000188"
     CDS             complement(16781..16984)
                     /locus_tag="RJ239_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330349.1"
                     /translation="MYERKDLRVLKIIQKAREFGDGDLLNEALVKQLIDADFCEINEK
                     EKEELATLLHSLINAKDKALLSN"
     gene            complement(16986..17666)
                     /locus_tag="RJ239_000189"
     CDS             complement(16986..17666)
                     /locus_tag="RJ239_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase family protein"
                     /protein_id="HDV7330350.1"
                     /translation="MGRSRKNFLSLLENDKVGIFCAFDKDYNVFRAKIHNENLFSHLG
                     FKDIEKCVFMDQIHSHKVIIYDENLKNLSCDGLISKEKNIALCVLSADCLPLILYHES
                     GIIAALHSGRKGSFENILKECVDQITMQNSHLDKNKFHLFILPGICAKNYEIDGEILE
                     FAKKEFKEFVQDDKLDLKALVKFQAQNLGIENIKDCGICSFDDESFFSYRRDKTTKRF
                     VSVVYLKD"
     gene            complement(17630..18241)
                     /locus_tag="RJ239_000190"
     CDS             complement(17630..18241)
                     /locus_tag="RJ239_000190"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HDV7330351.1"
                     /translation="MFNGLIREIAKVQSYQNNTLSLKAKYRPNLGDSIAVNGACLSVT
                     KLYEAGFEVELSRESRTHMAIENLKDKVHIEPALRYGDRIDGHLMQGHIDFIGTLEKI
                     QKDENGVDFHISLPKEAMKFMAEKGSIAVDGVSLTINEILKNGIRLTIIPITFKETLF
                     KDYQVGRKINIESDLLARYIYAQLQGKNKGLSWEEVERISYLY"
     gene            complement(18250..20790)
                     /locus_tag="RJ239_000191"
     CDS             complement(18250..20790)
                     /locus_tag="RJ239_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330352.1"
                     /translation="MKKIFYGVIAFVVVLLIAIYTILFTSFGNNIVANIAQKKIKESA
                     GLDVNITHFNLRFSSLELQANIANMADFNLKGALSPFKLGFDLDYLISLNQNYAKNLG
                     LNLNQNLSFGGKIQGKASDFTLDGKGYLLGSNVLLNARMYNYSPIALNLDAQNLKIEE
                     ILHLLSYPSYAKGFLNAQAKISAQNLKPDGNIIIKLDTSYINYEAIKKDVSLDLPLNS
                     NPKAEILANVKEDKIYAVSKIYNDYLNLQTQKTLYDISKNALSTDFNLSIPSLVKLEK
                     LTKTRLNGSLDVIGQTSVVNNALSSLNAQVIGLGGEVKASLKNNKIFADINEASLEKL
                     LALAGYGALVSGNLNAKLLNADLDFSNFDLEAKINNAKINTNELKKIAKIELPNAIFS
                     FDAKANAKNSNISYNALLASNLLNIKKLQGTYNLKNSELNTDLNAFIDDLSQFSAIAG
                     QKLQGKADLTAKAHIIGTQVQNLNANANLADGVIKADSNGKKLDLNIDKLDLSKLFVI
                     TGMPNYASGIVNAKVNLDNIDFNNLNGKANLEAKGILNAATLSKILNKNFPNNTSYDL
                     NTKINFKNNIAQFDSVLNSSLADLTKLQGSFDISKMLLNSDFNLKINDFSKLGFLLDR
                     KLKGKAEFNGKVGFDKNLNFVVNSPNLFEGKLQSTFKDNLLLADLNGVDLSSLAQGLD
                     FMDIYQGKADMKADYNLLSEEGEVNLDMKEGKLKPNLITNALKILTLKDITNDVYRTA
                     NAKALIKKENIKLNLNMQADRSYILVQSGALNSKSGALNLPFDIKLDRANFKGSITGT
                     TENPKVNLNAGSVLNSIKNVVGGGVSDGAKSTGDKVDKAVNKLLNKIF"
     gene            20952..21212
                     /gene="groES"
                     /locus_tag="RJ239_000192"
     CDS             20952..21212
                     /gene="groES"
                     /locus_tag="RJ239_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HDV7330353.1"
                     /translation="MNFQPLGKRVLVKRVEETKTTASGIIIPDNAKEKPLMGEVVAVS
                     KEITDIANGDKIVFAKYGGTEIKLDNNEYLVLNLDDILGILK"
     gene            21234..22871
                     /gene="groL"
                     /locus_tag="RJ239_000193"
     CDS             21234..22871
                     /gene="groL"
                     /locus_tag="RJ239_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344612.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HDV7330354.1"
                     /translation="MAKEIIFSDEARNKLYEGVKKLNDAVKVTMGPRGRNVLIQKSFG
                     APSITKDGVSVAKEVELKDSLENMGASLVREVASKTADQAGDGTTTATVLAHAIFKEG
                     LRNITAGANPIEVKRGMDKACEAIVAELKKLSREVKDKKEIAQVATISANSDEKIGNL
                     IADAMEKVGKDGVITVEEAKSINDELNVVEGMQFDRGYLSPYFITNAEKMTVELSSPY
                     ILLFDKKITNLKDLLPVLEQIQKTGKPLLIIAEDIEGEALATLVVNKLRGVLNISAVK
                     APGFGDRRKAMLEDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNG
                     AGEKANIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKK
                     DRVDDALSATKAAVEEGIVIGGGAALIKAKAKIKLDLQGDEAIGAAIVERALRAPLRQ
                     IAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSV
                     ASMLLTTEATISEIKEDKPTMPDMSGMGGMGGMGGMM"
     gene            complement(22914..24104)
                     /gene="dccS"
                     /locus_tag="RJ239_000194"
     CDS             complement(22914..24104)
                     /gene="dccS"
                     /locus_tag="RJ239_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     DccS"
                     /protein_id="HDV7330355.1"
                     /translation="MAKKVIRQILLIYLTTTGIFLTIFFALWYQKLYEELVVLKGATL
                     RENHRNIVISILNSRFTPIDISAKNIAQSTALKFAIFDVKKIVFSNIDFDLRKAKIEL
                     KGRGICDNKVFFLAPMSADHYFLRHASNEEVNTNDGLQILIQGEDVGKDLFWIRTKVF
                     GFAIMAFCILGLISYILVKIALKPLEDKISTLNRFIKDSTHELNTPLSVILMSIEQLE
                     HQNLGDNAKFTRIKLAAKSLSQVYSDLVFYNFPNTLETEKQKFDLRILLEERLEYFKV
                     FFEQKKITLKLDLNQANIFAPKSQISKLIDNLISNAIKYNKKGGVISIILKANFLSIA
                     DTGCGISKSNLNHIFDRYTRFNTDQGGFGIGLSLVKKVCDDNDIKIICESVENQGSVF
                     KLNW"
     gene            complement(24097..24762)
                     /gene="dccR"
                     /locus_tag="RJ239_000195"
     CDS             complement(24097..24762)
                     /gene="dccR"
                     /locus_tag="RJ239_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator DccR"
                     /protein_id="HDV7330356.1"
                     /translation="MAAKILLLEDDLSLSEIIEEFLNDEGYEVFLCDNAQEALDMAYE
                     RYFDLWILDVKVPLGDGFSLLKELRKSGKQTPAIFMTSLNTTNDLKQGFDAGCDDYIK
                     KPFELAELSIRVKALLKRAFSHKNEDFEDLGDGFRFEFTTQILYHNNKALTLPSKEIK
                     LLSLLLKNKNNFLSTERIFEELWDYDEEPSELSLRAYVKNLRKILGKEKIINQRGRGY
                     CYG"
     gene            24910..25509
                     /locus_tag="RJ239_000196"
     CDS             24910..25509
                     /locus_tag="RJ239_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HDV7330357.1"
                     /translation="MLPKWDNSYSVHNAKIDEQHKKLFKLAAKVEVVSDRSVSKNEVK
                     ELLAEFFNYMKDHFNDEEKYMQLIGYPNLEEHRKIHKEIIQTMINLIKDIKSTNDLKE
                     KLYIVAKKWLLEHILYEDMKVEKWRSSSLSTDDGGDVSFEAAEDEDNEHPQFYLYTCN
                     CPGKIHDVPYSIHQKIELQGRKFTCKTCKQAIKFYKKYS"
     gene            25520..25768
                     /locus_tag="RJ239_000197"
     CDS             25520..25768
                     /locus_tag="RJ239_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HDV7330358.1"
                     /translation="MKRNVKTYSFRMPLELKERLDNLSKNLSKPKSTIVKEAIEAYLN
                     EVEDFSFAVNALEELKDGDYQKASKKIDKIVKNLKQTK"
     gene            complement(25859..25933)
                     /locus_tag="RJ239_000198"
     tRNA            complement(25859..25933)
                     /locus_tag="RJ239_000198"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25899..25901),aa:Asn,seq:gtt)
     gene            complement(26026..27273)
                     /locus_tag="RJ239_000199"
     CDS             complement(26026..27273)
                     /locus_tag="RJ239_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDV7330359.1"
                     /translation="MNKSSIFYTITFIFIFAGVSVILGFLWLIEYDQQNYTRELNTKY
                     SLIANARLLNFAGVISEKEFEEQTKNYNKMDEITEAKQIRKILFRGDVLARVEVNNGL
                     IEIISYNRQVYLNIIYDGKVYLYKDQDYQTYRYFIIKAIAVAVICILVLLYIYIFKKL
                     KPLKRLKKQIDKFAQGKLGDIEDVSTGVDEISQVSEAFYQAIVQIRKLNQSRQFFLRN
                     IMHELKTPITKGLLTLEMIEDNKYKERLNGVFTRLEILINEFAAIEQITSGAAFINRK
                     KYNILDVLDEAKEIAMRDDSNIRIFMEESFFVNVDFKLFTTAIKNMIDNGIKHSEDGF
                     VQIDIIDDYICFKNRGPELNNTLEYYTQAFTQGSKQKSSFGLGLYIVNTILETHGMKL
                     DYLYEDGVNLFYFRNLKSVIVKE"
     gene            complement(27270..27944)
                     /locus_tag="RJ239_000200"
     CDS             complement(27270..27944)
                     /locus_tag="RJ239_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDV7330360.1"
                     /translation="MTNILMIEDDLELAEITAEYLEKFDMKVDIAHEPYIGLSKLALK
                     EYQLIILDLSLPGLDGLEVCEEIRKKYDTPIIVSSARHDITDKVNALELGADDYLPKP
                     YNPKELQARIKSHLRRISNTKSAIAKSVKDLVYDQYKHIITMKGQELTLTNAEFDILS
                     YLIKKEGGVVSREELVYNCSSISEDSSNKSIDVIISRIRQKMGDDPKTPKYIHSIRGI
                     GYKLTQ"
     gene            complement(28020..29438)
                     /gene="htrA"
                     /locus_tag="RJ239_000201"
     CDS             complement(28020..29438)
                     /gene="htrA"
                     /locus_tag="RJ239_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease HtrA"
                     /protein_id="HDV7330361.1"
                     /translation="MKKIFLSLSLASALFAASINFNESTATANRVNPAAGNAVLSYHD
                     SIKDAKKSVVNISTSKTITRANRPSPLDDFFNDPYFKQFFDFDFSQRKGKNDKEVVSS
                     LGSGVIISKDGYIVTNNHVVDDADTITVNLPGSDIEYKAKLIGKDPKTDLAVIKIEAN
                     NLSAITFTNSDDLMEGDVVFALGNPFGVGFSVTSGIISALNKDNIGLNQYENFIQTDA
                     SINPGNSGGALVDSRGYLVGINSAILSRGGGNNGIGFAIPSNMVKDIAKKLIEKGKID
                     RGFLGVTILALQGDTKKAYKNQEGALITDVQKGSSADEAGLKRGDLVTKVNDKVIKSP
                     IDLKNYIGTLEIGQKISLSYERDGENKQASFILKGEKENPKGVQSDLIDGLSLRNLDP
                     RLKDRLQIPKDVNGVLVDSVKEKSKGKNSGFQEGDIIIGVGQSEIKNLKDLEQALKQV
                     NKKEFTKVWVYRNGFATLLVLK"
     gene            29638..30531
                     /locus_tag="RJ239_000202"
     CDS             29638..30531
                     /locus_tag="RJ239_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ family protein"
                     /protein_id="HDV7330362.1"
                     /translation="MNSLYETLGVSKNASADEIKKAYRRLARKYHPDINKEKGAEEKF
                     KEINAAYEILSDEKKRAQYDQYGDSMFGGQSFHDFSRNTGGVNLDDILKDLFGGGFGG
                     RSRGGFNGFSSKGFSSGFGGFGGFEEEILDSNLELHIPFEKAVKGGEHSFNFQGETIK
                     FKIPHGIKEGEKLRIRSKGKQSRNGARGDLIIIVKIEESPIYTREDDDLYQKVDISLK
                     TALFGGKINIKTLKEGKEEAIINITPNSKNNQKIRLKGYGVQNRKSDIYGDMYLILNV
                     VLPNLDTLDEKFIELLKEKLP"
     gene            30547..30921
                     /gene="hspR"
                     /locus_tag="RJ239_000203"
     CDS             30547..30921
                     /gene="hspR"
                     /locus_tag="RJ239_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock transcriptional regulator HspR"
                     /protein_id="HDV7330363.1"
                     /translation="MEQHYDEPVYLISVVAKVLSIHPQTLRQYEREGLIEPSRTDGKI
                     RLYSQRDIDRIKLILRLTRDMGINLAGVDVILKLKNQLHEFENLIDELRLELSKQQDK
                     EAASKAVVKHKNSFDLIFYEKK"
     gene            30927..32552
                     /locus_tag="RJ239_000204"
     CDS             30927..32552
                     /locus_tag="RJ239_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDV7330364.1"
                     /translation="MDNFLEIFLITVAIAIVLNVIFKKFEIPTIIGYIAAGEIISEIY
                     HLSGKGEITHIAEFGIVFLMFTIGLEFSFKHLMAMKQEVFLNGSLQMLTCGFVFMLLA
                     IGILGLGDKSATIVGFALALSSTAVVLKILNDNGDINEQYGRKALGILLFQDIAVIPL
                     LLLVDIFSSNNQNIEKLLFTSLISALILITLLFFIGKYLVDRIFRLIIHTSSQEIFIS
                     TVLFMVIGASFLANYFGFSYSLGAFIAGALIAETKYKHKIEADLIPFRDLLLGLFFIT
                     VGMQIQLDVVAQNWFLIIVLTLLVMALKFGIVFGFLFLYTKKRVALKTAFAIAQIGEF
                     ALAIFSLLQAKNMLDIKTSQILIVVSILTMIITPFILNNIRKITNVVEDIALNTNAVQ
                     NIDSNIKLKNHLVVFGYGRLGQEVVQKIKNTGVPYLVLESDLNLVELGVSRGENVVFA
                     NAAQEETLKIANIEECAVAIITVTNEAKLEILCQVLANYPKPIDTIIHVNGTLKKMLF
                     SSIDENIRIIRSEKVIARNLVQEALECRIHKNT"
     gene            32562..32894
                     /locus_tag="RJ239_000205"
     CDS             32562..32894
                     /locus_tag="RJ239_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330365.1"
                     /translation="MTKNEEKALRVKYLRNLEKFFNGAISALKKEDFDKTKFEERMLK
                     NAKFFEKNPAVNLNSTYAKNLEFFVNACLDFSKEKSELLNLANALDKQKKQGEKKEKH
                     KNYLKDYE"
     gene            32891..33511
                     /locus_tag="RJ239_000206"
     CDS             32891..33511
                     /locus_tag="RJ239_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDV7330366.1"
                     /translation="MINVFFDMDGTLIDSANAISCAVNEIRQDLNLAPLSREIIMQTI
                     NTPNIDWAKELYNIENFHHSSFKEGYEKYFVKHYEQSVVLFEGVKELLEFLKSKNCFL
                     AIATNAPQSSLSNILKKHDIIPYFDKILGVSLGIEPKPHPMMLELLKSEAPYKTSVFI
                     GDSQKDKECAKNANLPYFHAKWYQKNLKENEFSNASELKGFLQKYL"
     gene            33567..35561
                     /locus_tag="RJ239_000207"
     CDS             33567..35561
                     /locus_tag="RJ239_000207"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HDV7330367.1"
                     /translation="MSELLIEIGTEELPAIPLLKELANIEKKWNNVLEEYRLVSDFKF
                     YYTPRRLVFFHENFADKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKARISENELS
                     FKEIKGKEVLYHQKAIKGLQSQEILGEMVEKFLKSLSFGKSMRWGANSFEFIRAIRSI
                     ACILNDELVNFQSYGVKSTKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRK
                     EKILEQFKLIESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSM
                     RENQRYFAVFNDKGLSNHFIVVSNAVCKDYSKIIHGNERVLRARLSDAMFFYQNDLQN
                     GLKPEKLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENISTALKYAKADLAT
                     QMVYEFTDLQGIMGSYYAQKMGLDYQICLAIKEQYLPNSEQAPLPSTEFSSIVALANK
                     LDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLSNHYKSFD
                     MQILKDFIFERLYTFYTVNASFVKAVLSSQNTDLIHINQSVNALIKLSKKDNFNENFA
                     TFKRLANIATKNPHKVDESLFVQEAESKLYKAFQEKTKANSLQEKLENLFALKPFIDE
                     FFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKELSL"
     gene            35558..36379
                     /locus_tag="RJ239_000208"
     CDS             35558..36379
                     /locus_tag="RJ239_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDV7330368.1"
                     /translation="MKALWILLSLTLWLFGAQNLELIKGQALFLELDKKDFLSLKNND
                     KNIPTFAHPKNQEKILAIFSLPYKNPPQNTKLIAFYKDKKEEIFIKTLEGNYKSEKLQ
                     IENKKIFPPKTIQERITKELKEANAIYSSYTPKALFNGAFNIPLNSFITSDFGKARTF
                     NEKVASYHSGTDFRATTGTPIYAANSGVVKIAKDRYFAGNSVVIDHGFGIYSQYYHLS
                     KIDVKIGQKIKKGELIGLSGATGRVSGPHLHFGILAGGKQVDPLDFVSKFNAIFQ"
     gene            36376..37326
                     /locus_tag="RJ239_000209"
     CDS             36376..37326
                     /locus_tag="RJ239_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HDV7330369.1"
                     /translation="MKFSDFFHAWLHESYYKNAVSIGKNGDFFTAVSVGNLFGTLLAK
                     HFLNLIDEKILKPPLELVEIGANEGYLSRDFLAALLELRPEIFSQISFFIIEPHEKLR
                     TLQKKTLEGVEFTHKNSLKECHFKNAFFFCNELFDSFTCELIDHDKMAFVENFKLIFK
                     NMDENLITKCKALNLTKGELSLELENFFKDLNQTCERFIFAGFDYGTLNPQSFSLRIY
                     QKHEVFSPFEVSLKDFFGKSDLTYNVNFTHLQKLIKEYDFKPLAFKKQSLAFMDFGFE
                     DLLEYTKNKNIKTYESFLSQAKILFFNFDEKFHFFEFQKN"
     gene            complement(37323..38297)
                     /locus_tag="RJ239_000210"
     CDS             complement(37323..38297)
                     /locus_tag="RJ239_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HDV7330370.1"
                     /translation="MLGIDLGSNTLRAVQMDEKLNKLKEYEFVIGAAKNLNQSGEISK
                     EAIQRLKNTLSILAKEQDLSKARAVATAAFRKASNTNEIFAHLKKEFGIDFKLIDAKS
                     EAKISVLGMQSGLRRLKIWGEFAYCDLGGASCELSFGKSFKSFDFGIISFYEKNCHSY
                     YKTCISYKKLIKKYPKFIINIKDKKLKIHFLIANPYLKHLAFRAFDEVAMIKKELCSL
                     GAKTVVLNSGVPTTLSALKQNISYEKYEATKVNGKKLCHKDFLNYAIKLFHMEEKKAI
                     KEVGTMRKNYLSAGCLLFYALFDKHKLLVIDEGLREGVCLASMKNIKF"
     gene            38353..39126
                     /locus_tag="RJ239_000211"
     CDS             38353..39126
                     /locus_tag="RJ239_000211"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HDV7330371.1"
                     /translation="MLLGVNIDHIAVLRQARMVNDPDLLEAAFIVARHGDQITLHVRE
                     DRRHAQDFDLENIIKFCKSPVNLECALNDEILNLALKLKPHRVTLVPEKREELTTEGG
                     LCLNHAKLKQSIEKLQNANIEVSLFINPSLEDIEKSKILKAQFIELHTGHYANLHNAL
                     FSNISHTAFALKELDQDKKTLQAQFEKELQNLELCAKKGLELGLKVAAGHGLNYKNVK
                     PVVKIKEICELNIGQSIVARSVFTGLQNAILEMKELIKR"
     gene            39123..40217
                     /gene="pdxA"
                     /locus_tag="RJ239_000212"
     CDS             39123..40217
                     /gene="pdxA"
                     /locus_tag="RJ239_000212"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase"
                     /protein_id="HDV7330372.1"
                     /translation="MKKLAISIGDINSIGLEILVRSHEELSKICTPFYFIHESLLNKA
                     LKLLNLKLFNAKIVAFKDDKDYEFNFIKKENSLEIYSFCLPLGFKVDENFEIQAGEID
                     AKSGLYGFLSFKAASYFVYEKHAHALLTLPIHKKAWEDAGLKYKGHTDALRDFFKKNA
                     IMMLGCKELFVGLFSEHIPLAKVSKKITFKNLSIFLKDFYKETHFKKMGLLGFNPHAG
                     DYGVIGGEEEKIMEKAIAFVNAFLHSKKDEKFFKKALKDENLQKELLLNFKGKGVYLP
                     YPLVADTAFTKTGLKNCNRLVAMYHDLALAPLKALYFDKSINVSLNLPIIRVSVDHGT
                     AFDKAYKNAKINTKSYFEAAKFAINLHSKA"
     gene            complement(40207..40809)
                     /locus_tag="RJ239_000213"
     CDS             complement(40207..40809)
                     /locus_tag="RJ239_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330373.1"
                     /translation="MKKIILLLGLSLASLGALSFDELIYKDEVKPSFDCSKIKYDGKS
                     DDELMICNKIGVRNEFDNKKLALVDNIYSSLYQNISKKADKKMKKDFKAISKKMLKER
                     KICIKNMQNTKAGENPLLSLLNASDCMQEAYIKVLLELMQRAKKDTKTKEVLEQIFKN
                     KVDKYENLLTQSLNTNKDLQDFIDSLAKEDLIDSRAKFKL"
     gene            40922..42121
                     /locus_tag="RJ239_000214"
     CDS             40922..42121
                     /locus_tag="RJ239_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7330374.1"
                     /translation="MQNYKKALFALALSAFCMGVTEFVMAGVLVDVEAYFSVDAKTAG
                     YLTTLYAIGVVIGAPLITIPLSRFHRHTQLLINLGIFALANFIIFFSQNFYLTAFARF
                     IAGTQHGVFFVIATLAVSAITPDDKKSSALAIMVTGLTVALVTGVPLGTFIGHYFGFK
                     FIFLLIFIITSLAFFGVWHMMPKNLHPSPTNLKNLIPAFSHQNLLKTYTITICSCGAQ
                     FVLYTYLQKILVEISGFKVQDTAYILLLYGICAICGNLWGGKIVDKKGAIFSLRLILS
                     IQVLVFLSVFLTMHSKILIIFSVALIGFFAFSTIPALKMLSITKAKRHTYKVIDSTVS
                     VNEAAFNVGIALASFLGGIVLARLGIEFNALFSALFVSPALIFALLFAKDKLNYKKFQ
                     RKSFTKV"
     gene            42177..42497
                     /gene="ciaC"
                     /locus_tag="RJ239_000215"
     CDS             42177..42497
                     /gene="ciaC"
                     /locus_tag="RJ239_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion antigen CiaC"
                     /protein_id="HDV7330375.1"
                     /translation="MVVDNTQKTSNAIFSTTTKVKEKNTSADEFQATLNEVKNKEEKE
                     DKKTNSSKFTNEDIDLGAVREDFRSYAWQKMREDQYKKNEETLLNKLFTTIDAGNATN
                     NTKA"
     gene            42681..43703
                     /locus_tag="RJ239_000216"
     CDS             42681..43703
                     /locus_tag="RJ239_000216"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HDV7330376.1"
                     /translation="MIFIDACFKKPTPYTPIWMMRQAGRYLPEYMEVRKQAGDFLSLC
                     KDYKKASEVSLQPIDILDVDAAIIFSDILVVPLEMGMNLRFEKGEGPVFGNPISTLED
                     LEKLDDQNAHKKLNYVYDALKLTREKLSQNKALIGFCGSPWTIATYMIEGSGSKNYAK
                     CKKMLYQNPELLHKILNKLTQVLKLYLEEQIKAGANAIQIFDSWASALEYDKFFEFSF
                     NYMLEISNFIKSKYPNIPVILFPKGISGYLDRIDGNFDVFGVDWSTPLDLARDKLSHK
                     YTLQGNMEPCRLYDKNAIKEGVEKILKTMQNKAHIFNLGHGILPDIPVENAKYFIKLV
                     QESSAK"
     gene            43700..44602
                     /locus_tag="RJ239_000217"
     CDS             43700..44602
                     /locus_tag="RJ239_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HDV7330377.1"
                     /translation="MKILFGPVSSRRFGRSLGIDLSPSKKQCNFDCVYCELDPKKAQE
                     KQDEIISIDKIISEVKAMLEKNVEFDFLTLTANGEPSLYPYLNELILSLRSIAKDKKL
                     LILSNGTAVLDEDKFNALLKLDVVKFSLDSAVAKTFYRIDRALKNIDLEKMIEKMADF
                     RARFNGDLIMEILVVKDLNDNEEEFEALNQALKKIMPLRVDLSTIDRPPAYAVKKVSE
                     EKLLELSKLIDSTPVLLAKRHYEGEKLSFNEEELLKMLHLRSQSEIDIEVKFDEQSKT
                     LLNQLIKEKKVKILDLAGVKFYKV"
     gene            complement(44599..45795)
                     /locus_tag="RJ239_000218"
     CDS             complement(44599..45795)
                     /locus_tag="RJ239_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330378.1"
                     /translation="MILAGIIFIFNLILAYLSIDISKLDSVTEQLKIGMFSSIFVLSL
                     TLFIFAFRQNRNINKIYQKIFCMQNDFLNFQKKIDVDSALDLLKEKFETTSQNLTKIS
                     HEKDRYLHLLEENLYQLINISNAMRCLNEGYNKEINSLILNALNSQKDQIRLELNEAL
                     EHHKSIIGTSHGKVLQFEASVAIVNNDELENFLLANLLSYFGIESTCFKNLSFDVNDF
                     HLIFIKDKIFNKNVKKNYDFIVMGRHKNTHYEYFLTLPFEKKDLENILQNKLDKVCTL
                     KFKTPYQNNVLLFKQNDFDATLFFNIIEKQCDKNICINSFSQLKQELSKETYRLILLD
                     YELIKFDLEQMRNLLSAYKKQHPQSHIIFFSKEKVRDFDCVSEVLSDVSRNDLITLLR
                     KYLPKA"
     gene            complement(45797..47599)
                     /gene="uvrC"
                     /locus_tag="RJ239_000219"
     CDS             complement(45797..47599)
                     /gene="uvrC"
                     /locus_tag="RJ239_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HDV7330379.1"
                     /translation="MTKENLENELKTLPNSTGVYQYFNQEGKLLYVGKAKNLKNRVRS
                     YFAFTPNLHANPRNSLRIQKMIEETVHLEFIATNSEADALILENSFIKQLHPKYNILL
                     RDDKTYPYIYVDFEEEFPRFEITRKLVKKSKIKYFGPFFKGARELLDALYLYYPLKQK
                     ASCKSPCIFYQISRCLAPCDKLISREKYLEILDEAIHALLNPSVLLKNLEKQMLVLAQ
                     NENYEEAAKVRDQIAMIKDLEVKVEIDIAKLEDFEVFALAFKNSVLSTLRFVVQNGKI
                     ISANSKITPIKNDIQWDQNEIYKQLILENFSMDIPLLANVIYVYEEFEDRVLLEEILS
                     QRFDKKISIKIPKIGEKRRICDLAFQNALLNIEKEQKNHDFTIQKELKSYFELENLPN
                     DIEIFDNSHLQGVANVGAMVTYRINSWDKSKYRKFHLKHKNDYDQMREVLTRRALDFD
                     KIPPPDLWLIDGGKALLDLAKEIIVSSGANVDILAISKEKIDAKAHRAKGGAKDKIHS
                     LKGEFSLSINDKKLQFLQKLRDEAHRFAISFHQNTKKKQDLKSSKLANLGLSSGVMQK
                     LLAYYGNFESIYKADFKDLTMLVGRKAAQKIKEN"
     gene            complement(47592..48086)
                     /locus_tag="RJ239_000220"
     CDS             complement(47592..48086)
                     /locus_tag="RJ239_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330380.1"
                     /translation="MGKRNNIKMTKNASAVINELMDKPHYKPLKTLFFCKDFLSSFPL
                     AKQRLIAKIYVKNHILNIITLHPAAYQELNHDDSKIYIKFLIKAYGQKYPLSGFVDIK
                     DIKIFSQKYTYAANKNKNDEKLSKNSYLELSKGEFKNCFKDKKLFKKFEDLRELIKKG
                     SNLD"
     gene            48225..>49754
                     /gene="guaA"
                     /locus_tag="RJ239_000221"
     CDS             48225..>49754
                     /gene="guaA"
                     /locus_tag="RJ239_000221"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HDV7330381.1"
                     /translation="MKKADILVLDFGSQYTQLIARRLREQGVYAEILPFNVSLADIKA
                     KEPKGIILSGGPASVYATDAYFCDKGIFDLNLPVLGICYGMQLMAHHYKATVAPAGHK
                     EYGKANIEIKKDNALFKNLPKKQTVWMSHSDKVENLPQGFEVLATSENSPFCVFGNED
                     KKFFALQFHPEVQHSEFGKNILKNFAKYACNCESIWNMGSFAKTQAEKIREEVGNDKV
                     LCAVSGGVDSSVVAALLASAIKEQIIVVFVDNGLLRSGEKEQVEFMFKNTLGIDLISI
                     DASEIFLSRLVNVTDPEQKRKIIGNTFIEVFEEEAKKHKDVKYLAQGTLYTDIIESSV
                     VGASKTIKSHHNVGGLPEKMNLKLIEPLKEIFKDEVRALGLELGLSKEVVYRHPFPGP
                     GLAIRIMGEVNRASLELLRKADVILLEELKSTGWYDKTWQAFCVLLNVKSVGVMGDNR
                     TYDNAVCIRVVDASDGMTATFSHLPYEILENISRRIINEVEGINRVVYDISSKPPATI
                     EW"
BASE COUNT        17937 a         7896 c         7134 g        16787 t
ORIGIN      
        1 atgaacttac ctatacttga tttacaagct tatgaaaaag ataaaagcac ttttcttaaa
       61 aatttaagag aaattgcttc taaaataggt tttttttatc ttatcaatac cagtatagat
      121 aaaaatttaa acgagaaatt attcaaactt ggcaaagaat tttttaatct ttctagaagt
      181 tcgaaagagc ttatttctat ggtacattct cctcaattta gaggttatac tagcgaaggt
      241 tttgaataca cagcaggatc taaggattat agagaacaac tggatatagg cacagaaaga
      301 gatgctttaa actggaattt aaactcaccc ttatggcaaa gactagaagg tcctaatctt
      361 tggcctagtg aaattccaga acttaaaaaa actttcttaa cttggcacaa acaaaccaaa
      421 aaagcttgtt taaagctttt aaaagccttc gctcaagctc ttgatctacc taacaatgct
      481 tttgataaac tttatggaga aaattcttac gaacattgta aaatcataca ttatccaaaa
      541 agctcaaaaa atatcactca aggcgtaggt tcacataaag atggtgggct tatcactttt
      601 gtttttcaag aaaaacaaag cggatttgaa gcttttatag atggtaaatg gcttagtata
      661 cccccacttg aaaatagcgt tgtagttaat ataggagaat ttttagaact agctaccaat
      721 ggctatttaa aagctactat tcaccgcgtg aatttaagcc caaaagaacg ctttagcata
      781 gcttattttc ttggagtgca gcttgataag gatataccta tttttaagtt aaatccagag
      841 cttgctaaag aaagtaaagg tgtggatact gatcctaaaa atccactttt aagaaatgtt
      901 gcaagtaatt attttaaaag aatgatacgc tctcatcctg atgtggcaag tatttatcat
      961 agtgacttga tagaaaaatt tagttttgcg taaaggagaa aaaatgactt tatttactaa
     1021 agctttttgc gtcgctactc tttttaccgg ttttgcatgg gcaaatgaag aacttaaagt
     1081 tggctcttct ataacacctc atgcagatat tttaagattt ataaaatcag cacttcaaaa
     1141 acaaggttat gatttaaaaa tttatgaatt caatgatgga gtaatcccta atgtaatggt
     1201 tgaaaatggt gagttagatg ctaattattt tcagcatgag ccttatttaa aagaattcaa
     1261 tcaaagacaa ggcacccatc ttgtaaaagt tgccagtatc catatagaac ctatggcagt
     1321 gtattctaaa aaacacaaag aatttcaccc caaggaagga caaagcattt ctatacccaa
     1381 taatcctaca aatgaaagcc gtgctttacg cattgtagca agcaaaggac ttatagaagt
     1441 taaggataat gagctcatca ctcctttaga tatcactaaa aatcctaaga agcttaaatt
     1501 tgtagagtta aaagacgctc aacttacaag gagtttagat gatgtagatt attctcttat
     1561 taatagcaat tttgctattt tagcaggttt aaaccctgta aaagatgggc tttatacaga
     1621 aagtaaatat agtgaatatg gcaatatcat cgccgttaaa gaaggtaatg aaaaccttcc
     1681 taaaatcaaa gccctagtaa aggccttgca aagcaatgaa gttaaaaaat ttatagaaga
     1741 aaaatatcag ggtgctttaa tccctacatt ttaaggagaa caaatatgaa aaattcaatc
     1801 atttcttacc caagaatagg tgcaaataga gaattaaaat ttgctattga aaaatacttt
     1861 aaaaaccaaa gttctaaaga ggagctttta aagagtgcta aggatttaag gattagacac
     1921 tggcaagaaa ttcaaaaagc tggcattgat tttatcccta gtaatgattt ttcactttat
     1981 gataatgtct tagatgcagc tgtgcttttt aacattgttc atacaaagta taaaaattta
     2041 aatttagatg ctttagatga atactttgct caaagtcgag gttatcaagg agaaaatgga
     2101 gatgttacag ccttagcaat gaaaaaatgg ttcaatacaa attatcatta tttggtgcct
     2161 gagtgcgata atgctgatat tatagcttta acaggggata aaatttttaa agaatatctc
     2221 gaagctaaag agcttggtat agaaagcaag cctgttttaa taggcatttt cacacttttt
     2281 aaactcattg cctttaaaga tgaaaaaact caaaaactcg ccaaagaaaa gcttttaaac
     2341 gcttacatag agctttttga taaactaaat gaacttaaag taacatggct tgaacttgat
     2401 gagccttatt tggtttatga tttaagcaag gaagatatcg ctttgttcga agaattttac
     2461 caagaacttt taaatcacaa aaaagatctt aaaattttac ttcaaagcta ttttggagac
     2521 ttaagagata tttatcctaa acttttagaa agcaaatttg atgctttggg gcttgatttt
     2581 atcgagggaa aacaaagctt agccttagtc caacaatacg gttttgctaa agataaaatc
     2641 ctttttgcag gtcttattaa cggcaaaaat atctatgcta atgattatgc taaaagccta
     2701 aagcttatta aagagcttca aaaatataca caaaatatca tcttaaacac ttcttgctca
     2761 cttttacatg tgccttatag cactgaattt gaaagcaaat tagattcaag ctatcttaaa
     2821 ctttttgcct ttgctaaaga aaaacttcaa gaacttaaag atttaaaaga aattctaaat
     2881 tctagcgaag aaaatccgct ctttagagcc aatcaagagc tttttaaaaa tatcccagag
     2941 cgtttagatg aaaaagtcaa agcaaggctt aaggccttaa aaaaagaaga ttttaccaga
     3001 acgcctagtt ttaaagaacg cgccttaatc caaaaagaat ttttaaaact ccctctttta
     3061 ccaaccacaa ccataggttc ctttcctcaa agtgccgatg taagatctaa tcgccttgcc
     3121 tttaagcaag aaaaaatttc agctcaaaac tacactgaat ttaaccaaca aaaaatcaaa
     3181 gaatgcatac aaattcaaga agaaatagga cttgatgttt tagtgcatgg agaatttgaa
     3241 agaaatgata tggtggagta ttttggagag aatctaaagg gctttttatt tactcaaaat
     3301 ggttgggtgc aaagctatgg cacaaggtgc gttaaacctc ctgtgatttg gggtgatgta
     3361 tcacgcacaa agcctatcac cttagcttgg tctaaatttg cacaaagttt aagtcaaaaa
     3421 atcgtaaaag gtatgctaac tggacctgta accatactta attggtcctt tccaagagaa
     3481 gacatcagtc taaaagaaag cactgagcaa attgccttag ctataagaga tgaagtgtta
     3541 gatcttgaaa atgcaggtat aaaaatcata caaattgatg aagcggcttt gcgtgaaaaa
     3601 ctgcctttaa gaaaaagtga ttggcatagt gagtatttag attgggctat tcctgctttt
     3661 aatcttgtgc atagcggggt aaaagctaaa actcaaattc acactcatat gtgttatagt
     3721 gaatttagtg atatcttaaa agaaattgac gctatggatg ctgatgtgat ttcttttgaa
     3781 gcttcaagat caaacttaag tcttttagat accctaaaag ctattcgttt taaaactgag
     3841 gtgggaccag gagtttatga tatacatagc cctagagttc caagcgtaga agaattaagt
     3901 ttaactatag aaaaaatttt aaacaaatta cctaaggagc aaatttggat caatccagac
     3961 tgcggactta aaacaagagc ctatgaagaa gttatagcct ctcttaaaaa tttagttacg
     4021 gccacgcaaa aaatacgaga acaattataa ggagttttca tgtgtagttt ttcttttgaa
     4081 gtttttccac caagaaagga tgaaaatatc aaaaatcttc atgctatctt agatgattta
     4141 gggcaattaa gccctaattt tatcagcgta acctttggag ctggaggctc tattaactca
     4201 caaaatactt tagaagttgc aagcttaatc caggaagaat atcaaattcc tagcatagta
     4261 catttacctt gcatccattc tagtaaagaa aaaatcactc agatacttca aaaatgcaaa
     4321 gaaaaaaatc ttaatcaaat tcttgcccta agaggcgata tatgtgaaaa tttaaaaaaa
     4381 agcaaagatt tttcttatgc tagtgattta atttctttta taaaaaaaca agaatacttt
     4441 gaaatttatg ccgcatgcta tcccgaaaaa cataatgaat ctaaaaattt catcgaggat
     4501 atacaccatc ttaaaactaa ggtaaatgca ggaacagata agctcattac tcaacttttt
     4561 tacgataatg aagattttta tacttttaaa caaaattgtg ctttagcaga tattgacata
     4621 cctatttacg caggtattat gcctattact aacaaaagac aggttttaaa aatttctcaa
     4681 ctttgcggag ctaaaatccc tcctaaattt gttaaaattt tagaaaaata tgaaaataat
     4741 actttggctt tagaagatgc aggtatcgcg tatgcttgcg atcaaattgt cgatttaatc
     4801 acaagtggtg tagatggaat tcatctttat actatgaata aatccaaagc ggctattaaa
     4861 atttatgaag ctgtaaagca tttgcttaaa gaagagcttc atgcttagaa aataaactat
     4921 tttttgcttt tatcttaact tattttcatt ttttagctta tggttttcta taagtaaaac
     4981 aaaaattaaa gataaaagca aacctggtat aatacccaag caaagataga aaaaagaatt
     5041 atatttaaaa aagaagaaaa gtgcaccaaa aagcattaaa gctaaagatg cacctttgaa
     5101 aaattctaaa atatagatca atgaccttcc tcaacaacag ttgcacccgc taaatataca
     5161 taagttaaaa tcataaaaat aaaagcttgt aaaaatgcca taaaagttaa aagcacataa
     5221 gcaggaagtg gagctatata aggaactaaa gctaaaatta ccattaaaaa taaatcgtcg
     5281 cctttaatat ttccaaacaa acggaaggac aaagaaacca cacgagaaag atgagagact
     5341 atctctatag gaaacatcaa aggagctaaa agtttaatag gtcccatgaa atgagcaaaa
     5401 tactttacaa aaccttgtgc cctaataccc tcaaaatgat aatatacaaa aactataata
     5461 gccaaggaca aagtcaaatt taaacttgca gttggagcgt gaaaaccagg tattatacct
     5521 ataatattac taaaaaacac tataatcccc aaagttgcaa ccaaaggaag atattttctt
     5581 gcaccttttt cacttcccat ggtatctcta cccatagata aaactccctc taaaaaagcc
     5641 tcacctaaat tttgcatacc gcgtggaaca agttgcatag aacgagtagc catcatagcc
     5701 actataacag caattaaagc taccaaacct atgtgaaaaa aataagaaaa agtatgactt
     5761 gcatcaagca aagagctaaa taaaaataaa tctttcatgg tttcctcaaa aattttattc
     5821 taaactcgaa attttagcaa aatcttactt atattttaat gaaaatttac atccattcta
     5881 aaacttgcga aagttcttta gcaacaaaac acttaagccc tatatcttcc aaaggcttag
     5941 aaggaacaat ggcattttta aatttttgca ttttagcttc ttttaaacgc gtatcaaggc
     6001 taaaaacctc tctaatttct ccatttaaac taagctcccc tataaaaata ctatctttgc
     6061 tcaaagggcg atttttaaaa cttgaaataa tagctgcaac cacagccaaa tccgccgcag
     6121 tttcgcttac ttttactccg ccactaatat ttacaaatac atcataatgc cccaaaggaa
     6181 tttcaagctt tctttcaagc aaagccaaaa gcatatctaa gcgatttttt tcatagcccg
     6241 tagcgctgcg ttttggataa gaactttcac acaccaaagc ttgaacttct aaaaccaaag
     6301 cacgagatcc ctccattaca acacctaaag cacttcctga aatagccttt ccacgagtaa
     6361 aaaaacgatt tgccaaatct tttgcactga tcaaaccctt agcagtcatc tcaaaaatac
     6421 ctacttcatt cgttccacca aaacgatttt taaagcctct taaaagtctg atttctttag
     6481 tggcatctcc ctcaaaataa agcaccacat ctaccatatg ctcaagaact ctaggtcctg
     6541 ctatagcacc ttctttagta atgtgcccta tgataaaagt actgatatta taagccttac
     6601 tcacacgcat aagctcaaaa gtaatctcac gcacctgagt gatgcttcct gctgctgaag
     6661 tgattttatt tgaatataga gtttgtatag aatcaacgat aagaatgcta taatcttttt
     6721 tgtgcaattc ttctaaaata ttttcaaggc aaagttcagt aagtaaaaat aaattcggag
     6781 tattagcctc aagacgatca gctcttaatt taacctgggc tttactttct tcgccactga
     6841 cataaagcac ttttttaccc tgtttagcta aatttgaagc aatttttaac aaaagcgtag
     6901 attttcccac acctggactt ccgcctataa gcactaaaga accttcaaca agccctccgc
     6961 ctaaaaccaa atcaagctca ttatcatctg tgctgtatct tgtaaaatgc tctaactcca
     7021 catcttcaat acaaacagcc tcacttgttt tcatgctaac ttgcgcaagc tcttttaaaa
     7081 ctttaatttg ctcagctttt aattctacaa aactatccca agctccacaa tcaggacatt
     7141 ttccaagcca tttgctttgt tgatttccac aagcttgaca ttcaaaaagt gctttatttt
     7201 ttgccattat tcaaaaatag gatctaataa agtatctaaa taagcacttg cattaaattc
     7261 ttgtaaatcc gtcatttgct cacccacgcc tacataaaaa ataggaagct caagctctct
     7321 tgctatacta aaaagtgcac cccctttagc tgtcccatca agctttgtga taatcacacc
     7381 atcaagtttt acaagctcat taaaagcttt agcttgtaaa attccagcat ttccctgtgt
     7441 tccatctaaa actaaaattt ttctatgggg tgcgccttct aaagctttgt ttgaaattct
     7501 tacaattttt tcaagctcat gagctaaatt tttttgattt tgcaaacgcc ctgctgtatc
     7561 gataataact ctatcaaaat cctttgcttt tgctttagaa atggtatcaa aagcaaccgc
     7621 tgaaggatca tgcccttgtg cagttaaaac tatatctaca tccacttttt gcgcccaaag
     7681 ttttaattgc tcaatcgcac ctgctctaaa agtatcacac gctcctaaaa tcactttttg
     7741 attttggttt ttgtataaat aagcaagctt ggcaatactt gttgtttttc ctgctccatt
     7801 tactcctaaa ataagctcta caaaaggttt ttcttgattg gtttcttttt tttcataaag
     7861 aaaataagaa cccataacac gctttaaatc ttcttttttt acttcatttt gaggtggtaa
     7921 ataataaatt atctcttcaa ctatttcata acttacatct gcttcaagca aaatttcttc
     7981 aagcaaatct ttggttatct ttttattctc tcctttaact ccaacaatat tttcaagagt
     8041 ttttgcaagt ccttttttaa aaaaattaaa cattaaagta tagccttttg tatatcaatt
     8101 tctagcattt cttcaggaat aagccctaaa tactgattaa tcaatttaga atgcttgttg
     8161 taaagaaaca tggtaggaat tccatttacc ccacctaaag ctttagctaa aagatagtta
     8221 ttttcaccat tagcgacttt ataagatatt ttatgctgtt ctataaattt ttgaatctca
     8281 tcgttagatt tatcttctaa taaaacccca actatattaa aatcattatt atacttttct
     8341 tgtaatttat taagatgagg gatttcagca atgcaagggg tacaccaagt ggtaaaaaat
     8401 acaaacaaag ttaccttatc ttcatcgttg aaatttaaaa cggcattttc ttttttaact
     8461 gaaattgatc ctccatcaat caaattaagt ttaaaattca tatcatcact ttgatttata
     8521 cttgcctcgg tgcttaaatt tacatcattt tgctgctttt ctttatcatt gctacaagca
     8581 acaaacaaac aagatattgc cactagtaaa agtatttttt taatcttcat tatttatcaa
     8641 tcctttatta ttctttataa aaatgctaaa attataacat acataagata atattttttt
     8701 aaaggcatat taatggaaaa aacagatttt agggcattgc aaaaaatacg ccttttcaaa
     8761 cattcaaaac taaatttcaa acaagattat aaaatattta aagaatgtct taaaataata
     8821 aagctattta aagctaaaaa tattttaatt tttattcctt tgcattatga accaaactta
     8881 ataaaatttc gccatattct taataaaaat tacaaacttt ttgttccatt tatgcaagat
     8941 aaaagtttaa aaattgtaaa attaagattg ccttttatta aaaaaaggtt tggggtttta
     9001 gagcctatag attctttttt taaagcaaaa attgatttag ctattgtgcc tgtaattggc
     9061 gtcgataaaa atttaaaaag aataggacat gggcaaggtt tttatgatag attttttgaa
     9121 aatttaaatt acaaacctca tataatattt atccaaagta tagatgcttt aagtcaaaat
     9181 aatctaacac aaaagcatga tatttcagga aaattataca taaaccctta taaaaaatat
     9241 tacaagaaag aaagaaaaaa tgatagaatc acttatcgca cttatagccg ctatagtcgg
     9301 actcggtata ggatatttag ttgcaaaaaa aatcaatgat gccaaatatg aaattttcgt
     9361 agaacaagcc aaagctaaag ccaaagctat agaatacgaa gcggagctta ttttaaaaga
     9421 tgcaaaaaat tcaattctta atgcagaatt agaagttaaa aaaaaatacg aagaaaaaac
     9481 tcacaaattt caaaaagatt ttaatcaaaa atttgatgat ctttctaaaa aagaacaaaa
     9541 acttcagcaa gaagaagaaa aactaaaaga agataaagaa tacctttgca agtcacaaaa
     9601 acacattcaa aacttacaat ctgatgttga taaattaaaa aataaatatc aagaaaaact
     9661 tgacgatgtt ttaaaaattt tagaacattc gacaggactt acacaaaatg aagccaaaga
     9721 aatcattctt aaaaaagtag aagaaaattc tcgcgagcaa attgcacata tagtaagaaa
     9781 atatgaagaa gaagcaaaaa atgaagctaa aagaaaagct aatttcatca ttgctcaagc
     9841 tacttctcgt tttgcaggtg aatttgcagc tgaaagactt atcaatgtta ttaacattaa
     9901 aaacgatgaa cttaaaggac gtatcattgg taaagaaggg cgcaatgtta aaaccttgga
     9961 aatggtttta ggtgttgata ttatcatcga tgatacacca ggtgctatta tagtaagttg
    10021 ttttaatctt tatcgccgtg ctattgctac aaaagttata gaacttttag ttgaagatgg
    10081 cagaattcaa cccgcgcgca tagaagaaat tcacgaaaaa gtgtgtaaag aatttgatag
    10141 tgccattcta gaagaaggcg aaaccatagt tatggatcta ggtttaaata aaatacaccc
    10201 tgaaattgta aaactcatag gaaaactcaa ataccgagca agctatggac aaaacgcttt
    10261 agcacattct ttggaagtgg ctcaccttgc aggaatcatt gctgctgagt gtggtggaga
    10321 tgagaattta gcacgtcgtg cgggaatttt acatgatata ggaaaagcat taacccatga
    10381 ttttgaagga tctcatgtgg atttaggtgc agaactttgc aaacgctaca aagagcatcc
    10441 tgtagtaatc aatgctattt acgcacatca tggacacgaa gaagctacaa gcatagaatc
    10501 agcagctgtt tgtgcagcag atactttaag tgctgcacga cctggagcta gaagagaagt
    10561 gttagaagct ttcttaaaaa gagtcagtga gctagaagat atcgctaaaa gtaaagaagg
    10621 aattaaaaat gcctatgcaa tcaatgccgg aagagaaatt cgcgtcatag ccaatgctca
    10681 gcttgttaat gatgatgaaa gtgtactttt agctaaggaa atagcagctg aaattcaaga
    10741 aaaaatgcaa tatcctggtg aaattaaagt caatgttata cgtgaactta gagctgtaga
    10801 atacgctaaa taaggtttat tatgcaagat atgattgata ctttaataaa atatggttat
    10861 attgttttat tcttttactc tttagggggc gggatggttg gaattttagc tgcaggagtt
    10921 ttaagttctc aaggaaaaat ggatcttagt ttttgcattg ctcttgcttt tattgctaat
    10981 accataggtt caactttgct ttttatactt ggaaaatatt ataaaaaaga cattatgcct
    11041 tattttaaaa aacaccgacg caagatagcc cttgctatga taaaaacaaa acaacatgga
    11101 attattttac ttgtaactca aaaatttatt tatggtttaa aaactttcat tcccatagct
    11161 gcaggtatgg caaaatataa ttttattaaa ttttttatta tcaatactct agctagtttg
    11221 gcatgggcta ttgttctagg ttttactgct tatacttttg ggtatgttat tgaagcaatt
    11281 tttgataaac tgagtttata tccttatgct gctcctttat ttttattatt tttagccgga
    11341 ataatttggc tttatttaag taaattttct aaaaaataat gtctctatgg aattcttttt
    11401 cttactcttt taaagaattt cattatttat ttttctctgt tgttgttatt tttattttta
    11461 atatcctttt agaatataat aattttttaa actttaaaaa ccaaaaacat taccttatag
    11521 acaacgctct attaacgcac caatatataa aatataataa aaaaaataaa aaatactggg
    11581 ttttaaagtt acaaactgaa aacttcactt tttatactac aagttttaag gatttaaatt
    11641 taagcaagaa tcaattttta agccttagaa ttatcaccca taatattaac tttaaagact
    11701 atctgagtaa aagtttttac gcaccttctt atgattttga aaaattaaaa gaaaaagaat
    11761 acaatcccat tatatcttac ttcttaaatc aacatacaaa tgaaaagatt aaagaatttt
    11821 atggtgcttt attttttgca ctgcccatat ctttagagct tagaaacgat gtaaattact
    11881 acggtatagc acaccttata gcaattagcg gttatcacat aggcttactt tttagtttaa
    11941 ttttctttat tttagctcca atttatagtt ttttccaaaa aagatatttt ccttatagaa
    12001 atttacgttt agatttaagt attttaattt ttgcactact tttagcttat gcttgtttaa
    12061 taggatttgt cccttctttt gtgcgctcct tgattatggc tttttgggtt ttttatctat
    12121 tgtgtaaaaa tataaaaatc attaatttcg ttacgctttt ttgtagtatt ttattgtgca
    12181 tttctcttta ccctagactt ttatttagta ttggattttt attttctatt ttaggtgttt
    12241 tttatatttt tttatatatg catcattttg caaataaatt taataatctt ataaatatta
    12301 ttttgcttaa tatttggact ttttttgcta tggttttacc tgtgctttat ttttttccac
    12361 ttataagcta ccaacaaatt ttaggtatta ttttgagtgg aatttttgta atattttatc
    12421 ctttagtatt atttttgcat cttataaact atggagattt gctcaatttt atcttagatg
    12481 aattttttaa atttaaaatt tatggaacta atatccatat cccattttgg atttttataa
    12541 gttatcttat tgcttcttta atctctgtgc gatttaaata tctagctttt ctttgtattt
    12601 ttgcgaattt tattcccttc attatgattg tgatttagaa aataatagag tttaagccca
    12661 aaaagataaa taatccaaga aatataaatc caaataaaaa agaataaaat agtagaaaaa
    12721 gatccataaa cgctagcgta tgttttatta tataccacgt aatatacaaa taaatttttt
    12781 cctatatacc aaatagtacc cgctccaaaa gatactaaag ctaaactttt aagagttccc
    12841 ttatgaacag aacttgaata agatataaaa aataaacccc aaataattac aaagggtaaa
    12901 atttcaaaaa aattaaaccc tattttataa tcatctaaag tttgttggat aaaacctgaa
    12961 atataaaaac taagcccaag ccccaaagga acaagagtta aaagagtcca ataagaacta
    13021 atactttgcc aaagtccttt aggttcattt ttagtaatgc gattgattac aaaatcatag
    13081 cctgaaaaaa aagctaaaga agtaaatgcc atagcaataa gacctacaat acccaaattt
    13141 acactatttt ttaaaaaagt atcgatgtag gtagcaacaa catcttgttg cgttggtatt
    13201 aaaaaagcaa aaattacttg ctttgctttt tcataataag ctttaaaact ggaaatttgc
    13261 gtaaaaacag aaaaacatac aaataaaata ggtattaaag ataatacagt ataaaaacta
    13321 agcgctgctg cataatttaa aatttcctta tcacgcaaat ttagtaaaat agtaaaaaaa
    13381 tttttcacct tctaaagtcc cattttaaaa ggatttagta tattatttgg atcaaaagct
    13441 tttttaatat ttctcattaa attcatttcg gcttcagaaa aagctaaatt cataaaaggt
    13501 gccttagaga gtccgatacc atgctctccg cttaaagttc ctccaagttt cactgttaat
    13561 ttaaaaatct cttccacagc ttcatagcct tttttcacct gctctttatc atttttatca
    13621 ggaaccataa cattagtatg cacatttcca tcccctgtat gtccaaagca aggaatttta
    13681 aaaccatatt ttttagaaat ctcatctata ccttcaagca aagtaggtag tttagaacgc
    13741 ggaactgtaa tatcttcatt aagttttaaa gttccataca tggcaatgct ttgagaacaa
    13801 tttcttctag caaaccaaat atctgcggtt tcttgttcat cttttgctat tttaaattcg
    13861 ctagcgccag cttctaaaaa ataatgttct aaatttctta aatcctcatc aatagcctct
    13921 ttaacattac catccacatc agcaatcaaa atagctccag cttctatagg caaaccttta
    13981 ttaaatttgc tctcaaccgc tctaatgcta agattgtcta aaaattccat agatacagga
    14041 cttacaccgc tagcaagact tttgtaaacc gcattcatag cactttttac acttggaaaa
    14101 atagcaaaag cagttttttt aaatttaggc aaaggtatta attttaaagt aagctcactt
    14161 aaaactgcca aagaaccttc actagcgatt aaaattcctg ccaaattata acctgctaca
    14221 tctttaatag tgcgtttccc tgcacgaatg atttctccgc taggcaaaac agcccttaaa
    14281 gccatcacat aatcttttgt aatgccatat tttgcagctc tcattccccc agcattttcg
    14341 cttacattac cccctaagct tgaatactcc atgctagcag ggtcaggtgg ataaaaaagt
    14401 ccgtatttgg ctacttcttt ttgtaaatgt atattaataa ccccaggttg cacaacagcc
    14461 actaaatttt caagatcaat ttctaaaatt ttattcatat gcttttcaaa agcaagcacc
    14521 accccgccat taacagctaa agctcctcct gtaaaaccag atcctgagcc tcgcggtatg
    14581 actatgatat tattttcatt acaaaatttt aaaattcgag caatatcttc ttcatttctt
    14641 ggaaaaagaa ccccatcggg taaataatgt ttttttgtcg catcatagct ataagctctt
    14701 ttgtgaattt catcaaaata agcgttttct tctcctaaaa atcgtttaaa atattgttca
    14761 aattcttttt tcatgtttat tgcaccttag gaagattaat caaagcatca taatacctat
    14821 aataatttcc tatttcttga gagttaaaat caaaaaaatt acttttatat ccacctatac
    14881 gagaataaaa aggaacctga acgctagttg gcttgcttat aggcacttca taaagcttat
    14941 taaaatcttg acaatccaca acttctgcat gattttccaa agccacaacc aaaatgccga
    15001 ccgcattatc atcacaaaat tgcctaaaat ctgaacgctt aggagaaaga gtagccgttc
    15061 taattaattg tgctccaaaa atatcaatat gggtaaaata tatctgcgga aattctctaa
    15121 caagttcatt ataagtttgt tcatcaggag caattaccaa tcctctatca taaagaaaat
    15181 ttaaaacaac ctcatcacct actttaggta aaacatttgg taaaggcaaa gcatcttgct
    15241 taagagctga aaaaacacta aattctaatt ttgccaaacc atttttttta tctataacac
    15301 ttgctctagc gatgatactt tgcgaattgc taaaatgttg cactactacg ccacttgaat
    15361 aaagttttat atcatcacta tctttaatat aaccataaat atcatcaact tttacaagtt
    15421 cactttttat aggttttaaa tcaaatccaa ccgcaaagag gctaaggttt aaagctaaaa
    15481 aacacactat agttttaaac aaatttgctc cttaaataaa aatttataga attataatcc
    15541 ttttttgtta agcaattgta agaaaaataa agtaaaatat agctttcaaa tttcaaaatt
    15601 cttttaaaaa ttaaggttat ctcatgaaaa aattattgct tttatttatt tttgttgttc
    15661 aaagttttgc agctttaagt gttgaagagc taacttggga taatggagat accttgctta
    15721 aattcctaca aagaaattcc atacctatgt cgctttatta tggacttgat agagaagatc
    15781 aagaacttgc ttctgatata gcctataaaa taaaatatca agttttaaaa gatgaaaaca
    15841 acaacataga acaagtttta attccaatta gtgatgattt acaaattcat atctataaag
    15901 ataaagatgg acaatacact cttgctttta ctcctgtatc ttatcaaaaa gaagatagaa
    15961 ttttacattt aaccattaaa agctctgctt atcaagatgt ctatgaagaa agtggtagca
    16021 gtactttagc tcgtgctatg gttcgtgctt ttcgaggaag tataaatttt cgcaatatcc
    16081 aaaaaggtga tgaagtaacc ctatattatg aacaaaaaag acgcatgggt aaactttggg
    16141 gtgatataaa tataaaaatg gcaatggtag aaatcaataa aagcgctaga gaagtctttt
    16201 cttataatga tatattctat gatcgtgatg gcaaagaatt agaatctttt ttacttacaa
    16261 aacctgtgaa ttacactaga atttcttctc cttttacaac agcaagatat catcctatat
    16321 taaaacgcta tcgtgcccat cttggtatag actatgctgc acctactgga actcctgtga
    16381 aaagtgctgg caaaggagta gtaaccttta taggcacaaa aggtggttat ggaaatgtaa
    16441 ttcaaatcaa gcatgactca ggttatatga ctttatatgc tcatcttagt cgttttgcaa
    16501 aaattaaaaa cggacaaaag gtaaatcaag gacaagtaat tgcatatgtt ggttcaacag
    16561 gtatgagcac aggtcctcat ttgcattttg gagtatattt aaataataaa gctataaatc
    16621 ctgcatctgt tgtaaaaatc gccaaatcag aacttagtgg aaaagcgaaa gagaatttta
    16681 aacatatcat agctggatac gagcaggttg ttaaagaagc cctagcctcg aatcaaccta
    16741 atcctccaaa agaagaagat tttgaaaact atatagaatt ttaattactc aataacgctt
    16801 tatcttttgc attgattaaa gaatgtagaa gagttgcaag ctcttctttt tctttttcat
    16861 taatttcaca aaaatctgca tcaatcaatt gtttcaccaa agcttcattt aacaaatctc
    16921 catcgccaaa ttctctagct ttttgaatga tttttaacac ccttaaatct tttctttcat
    16981 acattttaat cctttaaata aaccacactc acaaaacgct tagtcgtttt atcacgacga
    17041 taagaaaaaa aactctcatc atcaaagcta caaattccac aatctttaat attttcaatg
    17101 cctaaatttt gcgcttgaaa ttttactaaa gcttttaaat caagtttatc atcttgaaca
    17161 aattctttaa attctttttt agcaaattct aaaatttctc catctatttc ataattttta
    17221 gcacaaattc caggcaggat aaaaagatga aatttattct tatctaaatg tgaattttgc
    17281 atagtaattt gatcaacgca ttcttttagg atattttcaa agcttccttt tctacctgaa
    17341 tgcaaagctg ctataatacc actttcatga tataaaatca aaggcagaca atccgcactt
    17401 aaaacacaaa gagcgatatt tttttccttg cttataagtc catcacaact gagatttttt
    17461 aaattttcat cataaatgat aactttatga gaatgaattt gatccataaa aacacatttt
    17521 tcaatatctt taaaacctaa atgagaaaat aaattctcat tatgaatttt agctctaaaa
    17581 acattataat ccttatcaaa agcacaaaaa ataccgactt tatcattttc taataaagat
    17641 aagaaattct ttcgacttct tcccatgata atcctttgtt tttaccttgt aattgtgcat
    17701 aaatataacg agcaagtaaa tcactttcta tattgatttt tctacctact tgatagtctt
    17761 taaaaagcgt ttctttaaag gtaataggaa taatagtaag cctaatacca ttttttaaaa
    17821 tttcattgat agtaagactt actccatcaa cagctatact tcctttttct gccataaatt
    17881 tcatagcttc tttgggtaaa gatatatgaa aatctactcc attttcatct ttttgaatct
    17941 tttcaagtgt gccgataaaa tcaatatgtc cttgcataag atgtccatcg attctatcgc
    18001 catatcttaa agcaggttct atatgaactt tatcttttaa attctctata gccatatgag
    18061 tgcgactttc acgagaaagc tccacttcaa aacccgcttc ataaagtttt gttacactta
    18121 aacaagctcc atttacggct atgctatcgc caagatttgg gcgatatttt gcttttaagc
    18181 ttaaagtatt gttttgataa gattgaactt tagcaatttc tcttatgagt ccattaaaca
    18241 ttttttacct taaaaaatct tatttaataa tttattcacc gctttatcaa ctttatcgcc
    18301 agtactttta gcaccgtcac tcacaccgcc acccactaca tttttaatag aatttaacac
    18361 gcttcctgca tttaaattta ctttaggatt ttccgtagtt cctgtaatac ttcctttaaa
    18421 attagctcta tcgagtttaa tatcaaaagg caaatttaaa gccccgcttt tagaatttaa
    18481 agctcctgat tgtactaaaa tataagaacg atctgcttgc atattaagat taagcttgat
    18541 attttctttt ttaatcaaag ctttagcatt agcagtgcga taaacatcat tggtaatatc
    18601 ttttagtgtt aaaattttta aagcattggt aataagattt ggttttaatt taccctcttt
    18661 catatccaaa ttaacctcgc cttcttcgct taaaagattg taatctgcct tcatgtccgc
    18721 cttaccttga taaatatcca taaaatccaa accctgagct agactactta aatccactcc
    18781 gtttaaatca gcaagtaaaa ggttatcttt aaatgtgctt tgaagctttc cttcaaataa
    18841 attcggacta tttacaacaa aatttaaatt cttatcaaaa cctacctttc cattaaattc
    18901 tgccttacct ttaagttttc tatctaacaa aaagcctagt tttgaaaaat catttatctt
    18961 taaattaaaa tccgaattta aaagcatctt acttatatca aaacttcctt gtagttttgt
    19021 aagatcagct aaagatgaat ttaaaacaga atcaaattga gcgatattgt ttttaaaatt
    19081 aattttggta tttaaatcat aacttgtatt gtttggaaaa tttttattta aaattttact
    19141 taaagttgca gcatttaaaa tacccttagc ttctaaattt gctttaccat taagattgtt
    19201 aaaatcgata ttatctaaat taacttttgc attaacaatc ccactggcat aatttggcat
    19261 acctgttata acaaaaagtt tagataaatc aagtttatca atgtttaaat caagtttttt
    19321 accatttgaa tcagccttga ttacaccatc tgccaaattt gcatttgcat ttaaattttg
    19381 tacttgagtg cctataatat gagcttttgc agtaagatct gccttacctt gtaatttttg
    19441 tcctgctata gcactaaact gagacaagtc atcaataaaa gcatttaaat ctgtatttaa
    19501 ctcactattt tttaaattat aagttccttg aagttttttg atattaagca aatttgaagc
    19561 aagtaaagca ttgtaagaaa tattactatt ttttgcattt gctttagcat caaaactaaa
    19621 aattgcattt ggaagttcta ttttagctat ttttttaagc tcattggtgt taatctttgc
    19681 attgtttatt tttgcttcaa gatcaaaatt agaaaaatcc aaatctgcat ttagaagttt
    19741 agcatttaaa tttccagaaa ccaaagctcc gtatcctgca agagctaata atttttccaa
    19801 acttgcttca ttaatatctg caaaaatttt attatttttc aaacttgcct ttacctctcc
    19861 accaagtccg ataacttgag catttaaact tgataaggca ttatttacaa cacttgtttg
    19921 acctatcaca tccaaactac catttagtct agtttttgta agtttttcaa gctttacaag
    19981 agaaggaata cttaaattaa aatcagtact taaagcattc ttgctaatat cataaagagt
    20041 tttttgggtt tgtaagttaa gataatcatt gtaaatttta cttacagcat aaatcttatc
    20101 ttctttaaca ttggccaaaa tttctgcttt aggattagaa tttaaaggca agtctaaaga
    20161 aacatctttt tttatcgcct catagtttat ataacttgta tcaagtttta tgatgatatt
    20221 tccatcaggt tttaaattct gtgctgaaat ttttgcttga gcatttaaaa aacctttagc
    20281 gtaactaggg taagataaaa gatgaagtat ttcttctatc ttaagatttt gcgcatctaa
    20341 atttaaagca atagggctgt aattatacat tcttgcattt aaaagtacat ttgaacctag
    20401 taaataaccc tttccatcta aagtaaaatc acttgcttta ccttgaatct taccgccaaa
    20461 agaaaggttt tgatttaaat ttaaacctaa atttttagca taattttgat ttaaagaaat
    20521 aagatagtca agatcaaatc caagcttaaa aggactcaaa gctcccttaa gattaaaatc
    20581 tgccatattt gcgatatttg cttgcaattc aaggcttgaa aaacgtaaat taaaatgcgt
    20641 gatatttaca tctaatcccg cactttcttt gatctttttt tgcgctatat ttgccactat
    20701 attattacca aaacttgtga aaagtatggt ataaatagca atcaaaagca caacaacaaa
    20761 agctataact ccataaaaaa tctttttcat ttttatcctt tagtttattt tataaaataa
    20821 ctttagtcta taaaactaaa cttttataaa tattttaatt taaagtattg acaaaattca
    20881 ttttttatag tatgatatta tcactctaaa taaaagagtg ctaaaatcaa tatttttaag
    20941 gatggacaaa aatgaatttt caacctttag gaaagcgtgt tctagtcaaa cgcgtagaag
    21001 aaactaaaac aacagcctca ggcataatta taccagataa tgctaaagaa aagcctttaa
    21061 tgggtgaagt agtagcagta agtaaagaaa tcactgatat tgcaaatggt gataaaatcg
    21121 tgtttgctaa atacggtgga acagaaatta aacttgataa taatgaatat ttagttttaa
    21181 atttagatga tatcttagga attttaaaat aatttataaa ataaggataa aaaatggcaa
    21241 aagaaattat tttttcagat gaagcaagaa ataaacttta tgagggcgtt aaaaaactta
    21301 atgacgcggt aaaagtaact atggggccaa gaggacgcaa tgttttaatc caaaaaagct
    21361 ttggtgctcc aagcattact aaagatggcg taagtgttgc taaagaagta gagcttaaag
    21421 atagtcttga aaatatgggt gcttcactcg taagagaagt agcgagtaaa acagctgatc
    21481 aagcaggcga tggaacaact actgcaacgg ttttagctca tgcaattttc aaagaaggtt
    21541 taagaaatat cacagcaggt gcaaatccta tcgaggtaaa acgcggtatg gataaagctt
    21601 gcgaagctat agtagcagaa cttaaaaaac tttctcgcga agtaaaagat aaaaaagaaa
    21661 ttgcacaagt tgctacaatc tcagccaact ctgatgaaaa aatcggaaat ttaatcgctg
    21721 atgctatgga aaaagtgggc aaagatggtg ttatcactgt tgaagaggca aaatcaatca
    21781 atgatgaatt aaatgtagtt gaaggtatgc aatttgacag aggttattta agcccttatt
    21841 ttatcactaa tgcagaaaaa atgacagtag agctttcaag cccttatatc ctgctttttg
    21901 ataaaaaaat tacaaattta aaagatttat taccggtttt agaacaaatt caaaaaacag
    21961 gcaaaccact tttaattatc gctgaagata ttgaaggtga agcgcttgca actttggttg
    22021 taaataaact tcgcggtgtt cttaatattt cagcagtgaa agctccaggt tttggcgata
    22081 gaagaaaagc tatgcttgaa gatatagcga ttttaacagg tggagaagtg atttctgaag
    22141 aacttggaag aactcttgaa agtgcgacta tacaagatct tggacaagct tctagtgtaa
    22201 tcatcgataa agacaataca accatagtaa atggtgcagg cgaaaaagca aatattgatg
    22261 cgagagtcaa tcaaatcaaa gcacaaattg ctgaaacaac ttcagattat gacagagaaa
    22321 aattacaaga aagacttgca aaattaagtg gtggtgttgc agttattaaa gtaggtgcag
    22381 caactgaaac tgaaatgaaa gagaaaaaag atcgcgttga cgatgcttta agcgctacta
    22441 aagcagcagt tgaagaaggt atagtaatcg gtggtggtgc agcgcttatc aaagcaaaag
    22501 ctaaaatcaa acttgatcta cagggtgatg aagcaattgg cgcagctatc gttgaaagag
    22561 ctttaagagc acctttaaga caaattgctg aaaatgcagg atttgatgca ggtgtggttg
    22621 taaatagcgt agaaaatgct aaagatgaaa acacaggatt tgatgctgca aaaggtgaat
    22681 atgttaatat gcttgaaagt ggaattatcg atcctgttaa agtagaaaga gtagctttac
    22741 tcaatgcagt ttctgtagct agtatgcttt taaccacaga agcaacaatt agtgaaatta
    22801 aagaagataa acctactatg ccagatatga gcggtatggg aggaatgggt ggcatgggcg
    22861 gaatgatgta atatctgctc taacctctta tcagcaagga ttttccttgc tgattaccaa
    22921 tttaatttaa aaacactccc ttgattttct acagattcgc aaataatctt aatatcatta
    22981 tcatcacaaa ctttttttac caaagaaagc cctataccaa atcctccttg atcggtatta
    23041 aatcttgtat atctatcaaa aatatgattt aaatttgact ttgaaattcc acaacctgta
    23101 tccgcaatac ttaaaaaatt ggctttcaaa attatagaaa ttactccacc ttttttattg
    23161 tatttaatag cattgcttat aagattatca atcaatttag aaatttgact tttaggagca
    23221 aaaatatttg cttgatttaa atcaagcttt agtgtaattt ttttttgctc aaaaaatact
    23281 ttaaaatatt ccaatctttc ttcaagtagt attcttaaat caaatttttg tttttctgtt
    23341 tctaaggtat tagggaaatt ataaaaaaca agatcagaat acacttgaga caaacttttt
    23401 gcagcaagct taatccttgt aaatttagca ttatctccta aattttgatg ctcaagttgt
    23461 tctatactca tcaaaataac acttaatggg gtattgagtt catgagttga atctttaata
    23521 aaacgattta gtgtgctgat tttatcctcc aaaggcttta gagcaatttt tactaaaata
    23581 taagatatta aacccaatat gcaaaaagcc ataatagcaa aaccaaaaac tttcgttcta
    23641 atccaaaaaa gatctttgcc aacatcttca ccctgtatta aaatttgcaa accatcgtta
    23701 gtatttactt cttcattgct agcatgtctt aaaaaataat gatctgcact cataggggca
    23761 aggaaaaaaa ccttattatc acaaatacct ctacctttaa gctctatctt tgcctttctt
    23821 aaatcaaaat ctatattact aaaaacaatc tttttaacat caaatatagc aaattttagt
    23881 gctgtgcttt gagcaatatt ttttgcactt atatctatag gggtaaaacg agaatttaag
    23941 atgcttataa caatgtttct atgattttct ctcaaagtgg caccctttaa aacaactaat
    24001 tcttcatata atttttgata ccataatgca aaaaaaatag ttaaaaaaat acctgtagtt
    24061 gttaggtaga ttaataaaat ttgcctaatg acttttttag ccatagcaat atcccctgcc
    24121 tctttgattt ataatttttt cttttcctaa aattttacgt aaatttttca cataagccct
    24181 taaacttagc tcactaggct cctcatcata atcccagagt tcttcaaaaa ttctctctgt
    24241 acttaaaaag ttgtttttat ttttaagtaa taaagacaaa agcttaattt ctttactcgg
    24301 taaagtcaag gctttattat tatggtaaag aatttgtgta gtaaattcaa atctaaatcc
    24361 atctcctaaa tcttcaaaat cttcattttt atgtgaaaaa gctcttttaa gcaaagcttt
    24421 aaccctgata gataactcgg caagttcaaa aggttttttt atataatcat cacaacctgc
    24481 gtcaaagcct tgttttaaat cgtttgttgt gtttaaagaa gtcatgaaaa ttgctggagt
    24541 ttgctttccg ctttttctta attctttaag taatgaaaat ccatctccta aaggaacttt
    24601 tacatctaaa atccaaagat caaaatatct ttcataagcc atatctaaag cttcttgcgc
    24661 attatcgcat aaaaatactt catatccctc atcgtttaaa aactcttcaa tgatctcact
    24721 caagctcaaa tcatcttcta aaagtaaaat tttagcagcc ataatttaaa tctttctaac
    24781 ttcaaatctc ttaaatatat atcattgtat caaaattctt atcaattatt taataaaatt
    24841 tcatttttat ttaatttatt tttatctata atcctttcat acaaataaat ttttccttaa
    24901 ggagttaaaa tgcttccaaa atgggataac agctatagtg tgcacaatgc taaaattgat
    24961 gagcagcata aaaagctttt taaacttgct gcaaaagttg aagttgtatc agatagatct
    25021 gtaagtaaaa atgaagtcaa agaacttttg gctgaatttt ttaattatat gaaagatcac
    25081 tttaatgatg aagaaaaata catgcagcta ataggctatc caaatttaga agaacatcga
    25141 aaaatacata aagaaatcat ccaaaccatg attaatttaa tcaaagatat caaatcaacc
    25201 aatgatctta aagaaaaact ttatatagtg gctaaaaagt ggcttttaga acacatacta
    25261 tatgaagaca tgaaagttga aaaatggaga agttcttctt tgtctacaga tgatggtggc
    25321 gatgttagct ttgaagcagc agaagatgaa gataatgagc atccacaatt ttatctttat
    25381 acctgtaatt gtcctggtaa aattcacgat gttccttata gcattcatca aaaaatagaa
    25441 ttacaaggtc gtaaatttac ttgtaaaact tgtaaacaag ctataaaatt ttacaaaaaa
    25501 tattcttaag gaggataaaa tgaaacgcaa tgtaaaaact tattctttta gaatgccttt
    25561 agagcttaag gagcgtttgg ataatttaag taaaaatctt tctaaaccaa aatcaaccat
    25621 agtaaaagaa gccatagagg cttatcttaa tgaagttgaa gatttttctt ttgctgttaa
    25681 tgccctagaa gaacttaaag atggggatta tcaaaaggca agtaaaaaaa tagataaaat
    25741 tgtcaaaaat cttaaacaaa caaaataaaa aactttatca caattttttt gtgataaaga
    25801 cttattaatt ttttatatta aaatacattt atgaatatta aaaatggagt taaaaaagtg
    25861 gctccggatg taggattcga acctacgacc aatcggttaa cagccgacta ctctaccgct
    25921 gagctaatcc ggaatattta aaagtaaaat atgattatag tgaaattaaa aaactttgtc
    25981 aagggttttt tcacaaaaat gcatttttta tgtaaaaaaa ttaatttact ccttaacaat
    26041 aacacttttt aaatttctaa aataaaacaa atttacccca tcttcatata aataatcaag
    26101 cttcattcca tgtgtttcta aaatagtatt tacaatataa agccctaatc caaaacttga
    26161 tttttgtttt gatccttgag taaaagcttg agtatagtat tctaaagtat tgttaagctc
    26221 aggaccacga tttttaaaac aaatataatc atctataata tcaatttgca caaacccatc
    26281 ttcagaatgt ttaataccat tatctatcat atttttaatc gccgtagtaa aaagtttaaa
    26341 atccacattt acaaaaaaac tttcttccat aaaaatacgt atattgctat catctcgcat
    26401 tgcaatttct ttggcttcat ctaaaacatc taaaatattg tatttttttc tatttataaa
    26461 agcagcccct gaagtaattt gctcaatagc agcaaattca ttaattaaaa tttcaagtct
    26521 agtaaaaacc ccatttaagc gctctttata tttattatct tctatcattt ctaaagttaa
    26581 gagcccttta gtaataggag ttttgagttc atgcataata tttcttaaaa aaaactgacg
    26641 agattggttt aactttcgaa tttgaacaat agcttgataa aaagcttcac ttacttgtga
    26701 aatttcatcc accccagtgc ttacatcttc tatatcacca agctttcctt gggcaaattt
    26761 atcaatttgt tttttaagtc ttttaagtgg ttttaatttt ttaaatatat aaatataaag
    26821 caatacaaga atacaaatca cagctacagc tatagctttg ataataaaat acctataggt
    26881 ttgataatct tgatccttat aaagataaac ctttccatca taaataatat ttaaatacac
    26941 ctgtctatta taagaaataa tctcgattaa gccattgtta acctcaaccc tagctaaaac
    27001 atcacctcta aaaagaattt tacggatctg ctttgcttct gttatctcat ccattttatt
    27061 ataatttttt gtctgctctt caaattcttt ttcactgata actcctgcaa aatttaagag
    27121 ccttgcatta gctatcaaag aatattttgt gtttaattct ctagtataat tttgctgatc
    27181 atattctata agccacaaaa agccaagtat aacactaacc ccagcaaaaa taaaaataaa
    27241 agttatagta taaaaaatcg aagatttatt cattgagtaa gcttataacc tattccacgt
    27301 atagagtgaa tatattttgg agtttttgga tcatctccca tcttttgacg aattctactg
    27361 ataataacat ctatactttt attactagaa tcctcactaa tagaagaaca attataaaca
    27421 agctcttcac gacttaccac tccaccctct tttttaatca aatagcttaa aatatcaaat
    27481 tcagcattag ttaaagtaag ctcttgtcct ttcatggtaa taatatgctt atattgatca
    27541 taaacaagat cttttacact ttttgctatg gcgctttttg tatttgaaat acgtcttaaa
    27601 tgacttttaa tacgtgcttg taattctttt ggattataag gttttggtag gtaatcatct
    27661 gctccaagct ctaaagcatt aaccttatct gtaatatcat gtcttgcgct tgaaacaata
    27721 ataggcgtat catacttttt acgaatctct tcacacactt caagcccatc aagccctggc
    27781 aaagaaaggt ctaaaatgat aagctgatat tcttttaatg caagcttaga aagacctata
    27841 taaggttcat gagctatatc aactttcata tcaaattttt ccaaatattc agctgtaatt
    27901 tctgctaatt ctaaatcatc ttctatcata agaatatttg tcatagtttt cctttatttt
    27961 aaacttaatt ttaattttaa actaaaattt ataacgaaag gaaaatcctt ccgttatttt
    28021 tatttaagca caagcaaagt cgcaaaacca ttgcgatata cccaaacttt ggtaaattct
    28081 tttttattaa cttgttttaa agcttgttct aaatctttta aatttttaat ttcactttgt
    28141 ccaacaccta tgataatatc accctcttgg aaaccagaat tttttccttt gctcttttct
    28201 ttaacactat caaccaaaac accattaaca tcttttggaa tttgcaaacg atccttaagt
    28261 cttggatcta aatttctcaa actcaaacca tcaatcaaat cgctttgtac gcctttagga
    28321 ttttcttttt cgcctttaag aataaaactt gcttgcttat tttctccatc tctttcgtaa
    28381 cttaatgaaa ttttttgacc aatctctaaa gttcctatat aatttttaag atcaatagga
    28441 ctttttataa ccttatcatt aactttagta actaaatctc cacgcttaag ccctgcttca
    28501 tcagcacttg aacctttttg aacatcagtg attaaagctc cttcttgatt tttgtaagct
    28561 tttttagtat caccttgcaa agctaaaata gtcacaccta aaaatcctct atcaatcttg
    28621 cctttttcaa taagtttttt agctatatct ttaaccatat ttgaaggtat ggcaaaacct
    28681 atgccgttat ttccaccacc acgagaaaga atagctgaat taatacctac taaatatccg
    28741 cgactatcca ccaaagctcc acctgaattt cctggattga tagaagcatc tgtttgtata
    28801 aaattttcat attgatttaa acctatattg tctttattta aagcagatat tatcccactt
    28861 gtaacactaa aaccaactcc aaaaggattt ccaagtgcaa aaacaacatc tccttccatt
    28921 aaatcatcag aatttgtaaa agtaatagct gaaagattat tagcctctat ttttataaca
    28981 gccaaatctg tttttggatc tttacctata agttttgctt tatattctat gtcgcttcct
    29041 ggtaaattca ctgtaatcgt atcagcatca tctacaacgt gattatttgt tactatataa
    29101 ccatcttttg aaataatcac ccctgatccc aaagaactca ccacttcttt atcatttttt
    29161 ccttttcttt gagaaaaatc aaaatcaaaa aattgtttaa aataaggatc attaaaaaaa
    29221 tcatccaaag ggcttggacg atttgctctt gtaatagttt ttgaggtgga aatattaacc
    29281 actgattttt ttgcatcttt aatagaatca tgataagaaa gcactgcatt tccagcagca
    29341 ggattcacac gattagccgt tgcagtcgat tcgttaaaat taatacttgc agcaaataaa
    29401 gcacttgcta aacttaatga taaaaaaatc tttttcattt catttccttt tgttcttaaa
    29461 gataaattat ctcgtaaaat attttactgt cttcatagta taaaaccgaa aatttacaaa
    29521 attgtaaata aaaccttgag tgataaaaat ttataaaact tgattgactt aggctaaagt
    29581 ttatgttata atttaatcct ctatataatc aagtaaaaat ttttaaggaa atataacatg
    29641 aatagtttat acgaaactct tggagttagc aaaaacgcta gtgcagatga aataaaaaaa
    29701 gcttaccgtc gcctagctag aaaatatcat cctgatatca acaaagaaaa aggtgctgaa
    29761 gaaaaattta aagaaattaa tgctgcttat gaaattttaa gtgacgaaaa aaaacgagct
    29821 cagtatgacc aatacggcga ttctatgttt ggtggacaaa gttttcatga tttttcaaga
    29881 aatactggtg gggtaaattt ggacgatatt ttaaaagatc tctttggagg aggctttggt
    29941 ggacgctcaa gagggggttt taacggcttt tcttcaaaag gctttagcag tggttttgga
    30001 ggatttggag gttttgaaga agaaatttta gacagcaatc tagagcttca cattcctttc
    30061 gaaaaagctg ttaaaggcgg ggaacatagt tttaattttc aaggcgaaac cattaaattt
    30121 aaaattccac atggtataaa agaaggcgag aaactaagaa ttcgctctaa aggaaaacaa
    30181 agcagaaatg gagctagagg agatttaatc attattgtaa aaatagaaga aagtcctatt
    30241 tacacaagag aagatgatga tttatatcaa aaggttgata tttctttaaa aactgcactt
    30301 tttggtggaa aaataaatat aaaaacactc aaagaaggca aggaagaagc aataattaac
    30361 ataacgccta attcaaaaaa taaccaaaaa attcgtttaa aaggctatgg tgtgcaaaat
    30421 agaaaaagtg atatttatgg ggatatgtat ttgattttaa atgttgtttt gccaaattta
    30481 gatacccttg atgaaaaatt tatagaactc ttaaaagaaa aattacctta aagaaaggaa
    30541 taaaatatgg aacagcatta tgatgaacct gtatatttaa tcagtgttgt ggctaaagtt
    30601 ttaagcatac atccacaaac cttaaggcaa tacgaaagag aaggattgat agagccaagt
    30661 agaaccgatg gcaaaataag actttattct caaagagata ttgaccgtat taaacttata
    30721 ttgcgtttaa caagagacat gggaatcaat cttgctggag tagatgttat cttaaaattg
    30781 aaaaaccaac ttcacgaatt tgaaaattta attgatgaac tacgcttaga attaagcaaa
    30841 caacaagata aagaagcggc tagtaaagcc gttgttaagc ataaaaatag ctttgatttg
    30901 attttttatg agaaaaaata aaaataatgg ataatttttt agaaattttt ttaatcaccg
    30961 ttgctatagc tatagtttta aatgtcatat ttaaaaaatt tgaaattcca actatcattg
    31021 gatatatagc tgctggagaa atcatttctg aaatttatca tttaagtggc aaaggcgaaa
    31081 tcactcatat agccgaattt ggtatagtgt ttttaatgtt taccataggg cttgaatttt
    31141 cttttaagca tttaatggca atgaaacaag aagttttttt aaacggctct ttgcagatgc
    31201 ttacttgtgg ctttgttttt atgctacttg ctataggaat tttaggactt ggagataaaa
    31261 gcgctaccat agtaggcttt gcactagcgc tttcttcaac cgcagtggtg cttaaaattt
    31321 taaatgataa tggcgatata aatgagcaat atggcagaaa agcattggga attttgcttt
    31381 ttcaagatat agccgttatt cctttgcttt tgcttgtaga tattttttca tccaacaatc
    31441 aaaacataga aaaactcctt tttaccagtt taatttcagc acttatttta atcactttat
    31501 tatttttcat aggtaaatat ctagtggata gaatttttag actcattatc cacacttctt
    31561 ctcaggaaat ttttattagt actgttttat ttatggttat tggagcaagt tttttagcaa
    31621 attattttgg attttcttat tctttgggtg cttttatagc aggtgctttg atagcagaaa
    31681 caaaatataa acacaaaata gaagcggact tgatcccatt tagagatttg cttttagggc
    31741 tttttttcat aactgtaggc atgcaaattc aacttgatgt agtggcgcaa aattggtttt
    31801 taatcatagt tttaaccctt cttgtaatgg ctttaaaatt tggcatagtt tttggctttt
    31861 tatttcttta caccaaaaaa agagtagcgc ttaaaacagc ttttgccata gcgcaaattg
    31921 gcgaattcgc cctagcaatt ttttctcttt tacaagcaaa aaatatgctt gatatcaaaa
    31981 cttcacaaat tttaattgtt gtttctattt taaccatgat tatcacgcct tttattttaa
    32041 acaatataag aaaaattacc aatgttgtag aagatatagc acttaatacc aacgctgtgc
    32101 aaaatattga cagtaatatc aagcttaaaa atcatcttgt tgtttttggc tacggacgct
    32161 taggacaaga agttgtacaa aaaatcaaaa atacaggcgt accttatctt gttttagaaa
    32221 gtgatttaaa tttagtagaa cttggagtta gtcggggtga aaatgtcgtt tttgccaatg
    32281 ctgctcaaga agaaacctta aaaattgcca atatagaaga atgtgccgta gctattatca
    32341 cagttacaaa tgaagctaaa cttgaaattt tatgtcaagt gctagctaat tatccaaaac
    32401 ctatagatac tatcattcat gtaaatggaa ctttgaaaaa gatgcttttt tctagcatag
    32461 atgaaaatat acgcatcatt cgctctgaaa aagtaatcgc tagaaattta gttcaagaag
    32521 cactagaatg ccgcattcat aaaaatacct aaggaagaat tttgacaaaa aatgaagaaa
    32581 aagccttacg cgtaaaatac ctaagaaatc ttgaaaaatt tttcaatggc gctatatctg
    32641 cacttaaaaa agaagatttt gataaaacta aatttgaaga aagaatgcta aaaaatgcta
    32701 aattttttga aaaaaatccc gcggtaaatc ttaactcaac ctatgcaaaa aatcttgaat
    32761 tttttgtcaa tgcttgttta gatttttcca aagaaaaaag cgaactttta aatcttgcca
    32821 atgctttaga taagcaaaaa aaacaaggtg agaaaaaaga aaaacacaaa aattatttaa
    32881 aggattatga atgattaatg tattttttga tatggatgga actttaatcg atagcgcaaa
    32941 tgccatttct tgtgcagtca atgaaataag acaggattta aacctagccc cactttcaag
    33001 agaaatcatt atgcaaacca tcaatactcc taatattgac tgggcaaaag aactttataa
    33061 tatagaaaat ttccatcatt ctagttttaa agaaggctac gaaaaatatt ttgtcaaaca
    33121 ctatgaacaa agcgtggtgc tttttgaagg ggtgaaagaa ctgttagaat ttttaaaaag
    33181 caaaaattgt tttttagcta ttgctactaa cgccccgcaa agctcacttt caaacatact
    33241 taaaaaacac gatatcattc cttattttga taaaatttta ggcgtaagtt taggcataga
    33301 acccaaacct catcctatga tgctagagct tttaaaaagc gaggctccat ataaaacaag
    33361 cgtttttata ggagatagtc aaaaagataa agaatgtgct aaaaatgcta atttgcctta
    33421 ttttcatgcc aaatggtatc aaaaaaattt aaaagaaaat gaatttagca acgctagtga
    33481 acttaaaggc tttttgcaaa agtatttata agttttttaa tgaaatttta gttaaaatta
    33541 gaaataaatt ttaaaaagag taaattatga gtgaattatt aatagaaatt ggtacagaag
    33601 aattacctgc tattcctttg ctaaaagaat tagctaatat agaaaaaaaa tggaacaatg
    33661 ttttagaaga ataccgcttg gtaagtgatt ttaaatttta ttatactccg cgtcgtttag
    33721 ttttttttca tgaaaatttt gcagacaaac aagaagatag ctttgctgaa tttataggag
    33781 cacctaaaaa tgttgcttat aaagatggag ttttaactcc tgcgggacaa agcttcctgc
    33841 aaaaagcaag gatcagtgaa aatgaactct cttttaaaga aatcaaaggc aaggaagttt
    33901 tgtaccatca aaaagctatt aaaggtttgc aaagtcaaga aattttagga gaaatggtag
    33961 aaaaatttct aaaaagtctt agttttggca aaagtatgcg ctggggtgca aattcttttg
    34021 aattcatccg tgcgatccgt tctatagctt gcattttaaa tgatgaactt gttaattttc
    34081 aaagctatgg agtaaaaagt actaaaaaaa ctttcattca cagaagcgta agttatgatt
    34141 tgcaagattt taacaatgca aaagaatatt ttgaactact agaaaaaaac tatatcatcc
    34201 ttgatccaat caaaagaaag gaaaaaatac ttgagcaatt taaactcata gaaagtcaaa
    34261 aaaatataca aattggagaa gatgaagagc ttttagctga agtagttgct atcacagaat
    34321 atcctaatgc acttttagga agttttgaag aagaattttt agaaattcct agcgaagtaa
    34381 tcatcacttc aatgagagaa aatcaacgtt attttgcagt ttttaacgat aaaggcttaa
    34441 gtaatcattt tatagtagta agtaatgcag tatgtaagga ttattcaaaa atcatacatg
    34501 gaaatgaaag agttttgcgt gcaagactta gcgatgcaat gtttttttat caaaatgatt
    34561 tacaaaatgg cttaaaacct gaaaaacttg ccaaaatgac ctatcttgaa ggtttaggca
    34621 caatgcaaga taaaagttta agagagatta aaattgctga aattttatgt caaatgctcc
    34681 ataatgataa aatcgaaaat atcagcacag cactaaaata cgccaaagca gacttagcca
    34741 cacaaatggt ttatgaattt actgatttgc aaggcattat gggaagttat tatgcgcaaa
    34801 aaatgggctt agattatcaa atttgcttag ctatcaaaga acaatatctt cctaattccg
    34861 aacaagctcc acttccaagt acagaatttt caagcatagt agcccttgca aacaagcttg
    34921 atacccttat aggacttttt agcataggaa aaattccaag cggaacaaag gatccttatg
    34981 ccttaagaag agctgccaat gggatcatta aaattgcttt aaatttaaat aaagaatttg
    35041 atatccaaat tttattagaa aaactttcaa atcattataa aagctttgat atgcaaattt
    35101 taaaagattt tatttttgaa agactttata ctttttatac agtcaatgct tcttttgtaa
    35161 aagcggtttt aagctcacaa aatacagatc ttatccatat caatcaaagc gtaaatgctc
    35221 ttataaaact tagcaaaaaa gataatttta atgaaaattt tgcaaccttt aaaagactag
    35281 ccaatatcgc cactaaaaat cctcataaag ttgatgaaag tctttttgtt caagaagcag
    35341 aaagtaaact ttacaaagct tttcaagaaa aaactaaagc caactcttta caagaaaaac
    35401 ttgaaaatct ttttgcactt aagcctttta ttgatgagtt ttttaatcaa gtgatgatta
    35461 atgctgaaga tgaaaaactt aaaaataatc gccaagcttt ggtttatgaa atttatgcgg
    35521 agtttttaaa aatcgccgat cttaaagagt taagcctatg aaagccctat ggattctttt
    35581 aagccttact ctttggcttt ttggagctca aaatttagaa ctcatcaaag gtcaagcttt
    35641 atttttggaa ctagataaga aagatttttt atctttaaaa aataatgata aaaatattcc
    35701 cacctttgca catcctaaaa atcaagaaaa aattctagct attttttcct taccttacaa
    35761 aaatcccccg caaaacacca aacttatcgc attttataaa gataaaaaag aagaaatttt
    35821 cataaaaact ttagaaggta attataaaag tgaaaaattg caaattgaaa acaaaaagat
    35881 ttttccgcca aaaaccatac aagaacgcat cactaaagaa ttaaaagaag ccaatgcgat
    35941 ttatagttct tatactccaa aagctttatt taacggtgct tttaatatac ctttaaattc
    36001 ttttatcaca agtgattttg gcaaagcaag aacttttaat gaaaaagtag caagttatca
    36061 cagcggaacg gactttagag ctaccacagg aacacctatt tatgcagcca attcaggtgt
    36121 agtaaaaatt gcaaaagatc gttatttcgc aggaaattca gtagtcattg atcatggttt
    36181 tggaatttat tcacaatatt atcatctttc taaaatcgat gttaaaatag gacaaaagat
    36241 aaaaaaaggt gaacttatag gacttagtgg ggctacaggt agggtaagtg ggccgcattt
    36301 gcattttgga attttagctg gaggcaaaca agttgatcct ttggattttg tatccaaatt
    36361 taatgctatt tttcaatgaa atttagtgac tttttccatg cttggctcca tgaaagctat
    36421 tataaaaatg ctgtaagtat aggaaaaaac ggagattttt ttactgctgt gagcgtagga
    36481 aatctttttg gcacactttt agccaagcat tttttaaatt taatagatga aaaaattctc
    36541 aaacctccac tagaacttgt agaaataggc gctaatgaag gctatttaag tcgtgatttt
    36601 ttagccgctt tgcttgaatt aagacctgaa attttttctc aaatttcttt tttcatcata
    36661 gaaccacatg aaaaattaag aactttacaa aaaaagactt tagaaggagt ggaatttact
    36721 cacaaaaata gtcttaaaga atgccatttt aagaacgctt ttttcttttg caatgaactt
    36781 tttgatagtt ttacctgcga acttatagat catgataaaa tggcatttgt agaaaatttt
    36841 aaacttattt ttaaaaatat ggatgaaaat ttgatcacaa aatgcaaagc tttaaatctt
    36901 acaaaaggcg aactcagttt agagcttgaa aattttttta aagatttaaa ccaaacttgt
    36961 gagagattta tatttgcggg atttgactat ggaactttaa atccacaaag ttttagctta
    37021 agaatctatc aaaagcacga agtttttagc ccttttgaag tatctttaaa agattttttc
    37081 ggcaaaagcg atctaactta taatgtcaat tttactcatc ttcaaaaact catcaaagaa
    37141 tatgatttta aacctttagc ttttaaaaaa caaagtcttg ctttcatgga ttttggtttt
    37201 gaagatttat tagaatacac aaaaaataaa aacattaaaa cttacgaaag ttttttatct
    37261 caagctaaaa ttttattttt taattttgat gaaaaatttc attttttcga atttcaaaaa
    37321 aactaaaatt ttatattttt catactcgct aaacaaaccc cctctcttaa accctcatca
    37381 atgactagaa gtttatgttt atcaaacaaa gcataaaaca gcaaacaacc tgcactcaaa
    37441 taattttttc tcatcgtgcc tacttctttt atagcttttt tttcttccat atgaaaaagt
    37501 ttaatagcat aatttaaaaa atccttatgg caaagttttt taccatttac tttagttgct
    37561 tcatactttt catagcttat attttgtttt aatgcgctaa gtgtggtagg aactccggaa
    37621 tttaaaacca ccgttttagc ccctaaagaa caaagttcct ttttaatcat agccacctca
    37681 tcaaaagccc taaaagctag atgctttaaa tagggatttg caattaaaaa atgaatttta
    37741 agttttttat ctttaatatt tatgataaat ttaggatatt tttttatcaa ttttttataa
    37801 gaaatacaag ttttataata agaatggcaa tttttttcat aaaaactaat aataccaaaa
    37861 tcaaaacttt taaaactttt tccaaaagaa agctcacaag aagcccctcc taaatcacaa
    37921 tacgcaaact ctccccaaat tttaagcctt cttaaacctg attgcatacc taaaacacta
    37981 atcttagctt cacttttggc atctataagc ttaaaatcaa tcccaaattc tttttttaaa
    38041 tgggcaaaaa tttcatttgt attgcttgcc tttctaaaag ctgcagtcgc tacagctctc
    38101 gctttactta aatcttgctc tttagctaaa atactcaaag tattttttaa tctttgtatg
    38161 gcttctttag aaatttctcc actttgattt agatttttcg ctgccccaat aacaaattca
    38221 tattctttta atttatttaa tttttcatcc atttgtactg ctcttaaagt atttgaacca
    38281 agatctatac ctaacatgac tttccttatt tgattttata gtataatagc aaaaaagttc
    38341 taaaggaaaa atatgctttt aggtgtaaat atcgatcata ttgcagtgtt aagacaagct
    38401 agaatggtaa atgatcctga tcttttagaa gctgctttta tagtagctag acacggagat
    38461 caaatcactt tgcatgtaag agaagatcgc cgtcatgctc aggattttga cttggaaaat
    38521 attataaaat tttgcaaaag ccctgtcaat ttagaatgtg ctttaaatga tgaaatttta
    38581 aatttagctc ttaaactcaa accccaccgc gttactttag tgcctgaaaa aagagaagag
    38641 cttactacag aaggggggct ttgtttaaat catgctaaat taaaacaaag catagaaaaa
    38701 cttcaaaatg caaacattga agtttcactt tttatcaatc ctagtttaga agatatagaa
    38761 aaatcaaaaa ttttaaaagc ccaatttata gagcttcata caggacatta tgcgaattta
    38821 cacaacgcac tttttagcaa tatctctcat actgcttttg ccttaaaaga acttgatcaa
    38881 gataaaaaaa ccttgcaagc tcaatttgaa aaagaattac aaaatttaga actctgtgcc
    38941 aaaaaaggcc tagaacttgg cttaaaagta gccgcgggac atggtttaaa ttacaaaaat
    39001 gtaaaacccg tagtaaaaat taaagaaatt tgcgagctaa atataggaca aagcattgta
    39061 gcaagatctg tatttacagg acttcaaaac gctattttgg aaatgaaaga acttattaaa
    39121 agatgaaaaa actagccatt agtataggcg atataaacag cataggactt gaaattttag
    39181 tgcgttctca tgaagaacta agcaaaatct gcacaccttt ttattttatc cacgaaagct
    39241 tacttaataa agctttaaaa cttttaaatt taaaactttt taatgcaaaa atcgtagctt
    39301 ttaaagatga caaagactat gagtttaatt ttataaaaaa agaaaattct cttgaaattt
    39361 actctttttg ccttccttta ggctttaaag tggatgaaaa ttttgaaatc caagccggag
    39421 aaatagatgc aaaaagtgga ctttatggtt ttttaagctt taaggcggca agttattttg
    39481 tctatgaaaa acacgcccat gccttactta ctctacctat acacaaaaaa gcttgggaag
    39541 atgcaggact taaatacaaa ggacacaccg atgctttaag ggattttttt aaaaaaaatg
    39601 ccattatgat gttaggttgc aaagaacttt ttgtagggct ttttagcgaa catatacctt
    39661 tagctaaagt gagtaaaaaa atcactttta aaaatttaag tatcttttta aaagattttt
    39721 acaaagaaac gcattttaaa aaaatggggc ttttaggttt taatcctcac gctggagatt
    39781 atggagttat aggtggagaa gaagaaaaga tcatggaaaa agctatagcc tttgttaatg
    39841 cctttttaca ctctaaaaaa gatgaaaaat ttttcaaaaa agccttaaaa gatgaaaatt
    39901 tacaaaaaga attgctttta aattttaaag gcaagggcgt ttatctaccc tatcctttag
    39961 tggctgatac agcttttact aagactggtt taaaaaactg caatcgttta gtggctatgt
    40021 atcacgatct tgcccttgct cctttaaagg ccttgtattt tgataaaagc atcaatgtaa
    40081 gtttaaattt acctatcata cgcgttagcg ttgatcatgg cacggccttt gataaggcct
    40141 ataaaaatgc taaaatcaac actaaaagtt attttgaagc ggctaaattt gcaatcaatt
    40201 tacattctaa agcttaaatt tagccctaga atcaatcaaa tcttctttag ctaagctgtc
    40261 tataaaatct tgcaaatctt tattggtatt taaactttga gtgagtaaat tttcatattt
    40321 atcaacttta tttttaaaaa tttgctctaa aacttcttta gtctttgtat ctttttttgc
    40381 tctttgcata agttctaata aaaccttaat ataagcttct tgcatgcaat cacttgcatt
    40441 gagtaaagat aaaagaggat tttcccctgc ttttgtattt tgcatatttt ttatacaaat
    40501 ttttctttct ttaagcatct tttttgaaat ggctttaaaa tcttttttca tctttttatc
    40561 tgcttttttt gaaatatttt gatataaact actatagatg ttatctacta aagcaagttt
    40621 tttattatca aattcattac gcacaccaat tttattgcat atcataagtt catcatcact
    40681 tttgccatca tatttgattt tagagcaatc aaaactaggt tttacttcat ctttataaat
    40741 aagctcatca aaactcaaag cccctaaact cgccaaactt aaaccaagca ataaaataat
    40801 ttttttcatt atttaccttt aaaattttta ttttatttta acaaaaatat tttgaatttt
    40861 ttaaggaaat taagccttta ttttattata atgcgttttt attttttata aggaacttaa
    40921 aatgcaaaat tacaaaaaag ctctttttgc actagctctt agtgcttttt gtatgggcgt
    40981 aactgaattt gttatggcag gagttttggt tgatgttgaa gcgtatttta gcgtagatgc
    41041 aaaaaccgcg ggctatctta caaccttata tgctataggt gttgttatag gtgctcctct
    41101 tatcaccata cctttaagtc gttttcatag acatacacaa cttttaatca atcttggaat
    41161 ttttgcttta gcaaatttca tcatcttttt tagccaaaat ttctatctta ctgcttttgc
    41221 acgctttata gcaggaacac aacatggggt attttttgtc attgccacct tagctgtaag
    41281 tgctataact ccagatgata aaaaatcaag tgctctagct ataatggtca cagggcttac
    41341 tgtagcctta gttactggag tgccgcttgg aacttttata gggcattatt ttggctttaa
    41401 atttatcttt ttactcattt ttatcattac aagtctagca ttttttggag tatggcatat
    41461 gatgcccaaa aatttacatc ctagcccaac caatcttaaa aatctaatcc ctgctttttc
    41521 tcatcaaaat ttgttaaaaa cttatactat aaccatttgt agttgtgggg ctcaatttgt
    41581 tctttatact tatttgcaaa aaatacttgt agaaataagc ggttttaaag tccaagatac
    41641 agcttatatc ttgcttttat atggaatttg tgcaatttgt gggaatttat ggggcggaaa
    41701 aatagtagat aaaaaaggtg ctattttttc tttgcgtctt attttaagca tacaagttct
    41761 agtattttta agtgtatttc tcaccatgca ttctaaaatt ttaatcattt ttagcgtagc
    41821 tttgatagga ttttttgcct tttcaaccat acctgcacta aaaatgctta gcattactaa
    41881 agctaaacgc catacttata aagtcataga cagtacagta agtgtgaatg aagcagcttt
    41941 taatgtaggc atagctttag caagtttttt aggtgggatt gttttagcaa gattgggtat
    42001 agaatttaat gctttatttt cagcactttt tgtaagccct gctttgattt ttgccttgct
    42061 ttttgccaaa gataaattaa attataaaaa atttcaaaga aaaagtttta caaaggtata
    42121 aattggaata gaaattgctt gcttatttaa tgtaaagtta aataaaggag gagaaaatgg
    42181 tagtagataa tactcaaaaa acatcaaatg ctatctttag caccacaact aaagttaaag
    42241 aaaaaaatac ttcggcagat gaatttcaag ccacattaaa tgaagtaaaa aacaaagaag
    42301 aaaaggaaga taaaaaaaca aactcaagca aatttactaa cgaagacatt gatcttggtg
    42361 ctgttagaga agattttaga tcttatgctt ggcaaaaaat gagagaagat caatacaaaa
    42421 aaaatgagga gactttgcta aataagcttt ttactacaat tgacgcagga aatgccacaa
    42481 acaatacaaa ggcttaatat acaaatcaat caaaactcaa actacataaa cgagaattcc
    42541 aataattctc gtaaaatttc taataactct ggataaaatg aaaaaattta ttatttcctc
    42601 tatatgaaga aaatatagaa aaattgacca atttaattta tcaaattctg ttataatttt
    42661 gctaaaaaca aaggaaaata atgattttta tcgatgcttg ctttaaaaaa cctacaccct
    42721 acacccctat ttggatgatg cgtcaagcag gaaggtattt gccagaatat atggaagtaa
    42781 gaaaacaagc gggtgatttt ctctctttat gcaaagacta taaaaaagct tctgaagttt
    42841 ctttacagcc tattgatatt ttagatgtag atgcagcaat cattttttca gatatcttag
    42901 ttgttcctct tgaaatgggt atgaatttac gttttgaaaa aggagaaggg cctgtttttg
    42961 gtaatcctat ttcaacccta gaagatttag aaaaacttga cgatcaaaat gcacataaaa
    43021 aattaaatta tgtctatgat gccttaaagc ttacaagaga aaaattatct caaaacaagg
    43081 ctttaatagg attttgcgga agcccttgga ctatagctac ctatatgata gaaggaagtg
    43141 gaagtaaaaa ttatgcaaag tgtaaaaaaa tgctttatca aaacccagaa cttttacata
    43201 aaattctaaa caaactaact caagttttaa aactttattt agaagagcaa attaaagcag
    43261 gtgctaatgc tatacaaatt tttgatagct gggcaagtgc tttagaatat gataagtttt
    43321 ttgaattctc ttttaattat atgcttgaaa tttcaaattt tattaaaagc aaatacccaa
    43381 atatacctgt aattttattc cctaaaggca ttagcggtta tttggataga atcgatggca
    43441 attttgatgt ttttggggtt gattggagca ccccgcttga tttagcacgt gataaactat
    43501 cacacaaata cactcttcaa ggcaacatgg agccttgcag actttatgat aaaaatgcca
    43561 tcaaagaagg agtggaaaaa atactaaaaa ccatgcaaaa taaagctcat attttcaact
    43621 taggacatgg gatcttgcct gatattcctg ttgaaaatgc aaaatatttt atcaagcttg
    43681 tacaagaaag ttcagctaaa tgaaaatact ctttggtcct gttagctcta ggcgttttgg
    43741 aagatctttg ggtatagatt taagccctag taaaaaacaa tgcaattttg attgtgttta
    43801 ctgcgagctt gatccaaaaa aagcccaaga aaaacaagat gaaattatca gcatagataa
    43861 aattatctct gaagttaaag ctatgcttga aaaaaatgtt gaatttgatt ttcttaccct
    43921 tactgccaac ggagagccta gtctttatcc ttatttaaat gagcttattt tatctttacg
    43981 cagcattgct aaagataaaa aattgcttat tttaagcaat ggtacagctg tattagatga
    44041 agacaaattt aatgctttgc taaaactaga tgtggtcaaa tttagcctag atagtgcagt
    44101 tgctaaaact ttttatcgta ttgatagagc tttaaaaaac attgacttag aaaaaatgat
    44161 agaaaaaatg gcagatttta gagctaggtt taatggagat ttgattatgg aaattctagt
    44221 tgttaaagat cttaatgaca acgaagaaga atttgaagca cttaatcaag ctttaaaaaa
    44281 aatcatgcct ttaagggttg atctaagcac catagataga cctcctgctt atgctgttaa
    44341 aaaagtaagc gaagaaaaac ttttagaact ttctaaactt atagattcta ctcctgtact
    44401 cttagccaaa agacattatg aaggtgaaaa actaagcttc aatgaagaag aattattaaa
    44461 aatgcttcat ttgcgctcac aaagcgaaat agacattgaa gtgaaatttg atgaacaatc
    44521 caaaactctc ttaaatcaac ttatcaaaga aaaaaaggta aaaattctcg atttagctgg
    44581 agttaaattt tataaagttt aggcctttgg caaatacttt ctaagtaaag ttataagatc
    44641 atttctactt acatcactta aaacttcgct cacacaatca aaatccctaa ctttttcctt
    44701 tgaaaaaaag atgatatggc tttgtggatg ctgtttttta taagcactta gcaaatttct
    44761 catttgctca agatcaaatt taattaattc ataatcaagt aaaatcaaac gataagtctc
    44821 cttgcttaat tcttgtttta attgactaaa agaatttata catatatttt tatcacattg
    44881 tttttctatt atattaaaaa acaaggttgc atcaaaatca ttttgtttaa aaagcaatac
    44941 attattttga taaggggttt taaattttaa agtgcaaacc ttatcaagct tgttttgcaa
    45001 aatattttca agatcttttt tttcaaaagg taaagttaaa aaatactcat aatgtgtatt
    45061 tttatgccga cccatcacta taaaatcata atttttcttt acatttttat tgaaaatttt
    45121 atccttgata aaaatcaaat gaaagtcatt aacatcaaaa cttaaatttt taaaacaagt
    45181 gctttctatg ccaaaatacg aaagtaaatt tgcaagtaaa aaattctcaa gctcatcatt
    45241 attaactatg gccacacttg cttcaaattg caaaaccttt ccatgagatg ttcctataat
    45301 gcttttatga tgctctaaag cctcatttaa ttctaatcta atttgatctt tttgagaatt
    45361 taaggcattt aaaatcaaag aattaatttc tttattatac ccttcattta agcaacgcat
    45421 tgcattagat atatttataa gctgatataa attttcttcc aataaatgca aatatctatc
    45481 tttttcatgg gatattttag ttaaattttg gctcgtagtt tcaaattttt cctttaacaa
    45541 atcaagcgca ctatcaacat caatcttttt ttgaaaattt aaaaaatcat tttgcatgca
    45601 aaaaattttt tgatatattt tgtttatatt tctattttgc ctaaaagcaa aaataaaaag
    45661 tgttaaagat aaaacaaaaa tgctagaaaa catacctatt ttcagttgtt cagtaacact
    45721 atcaagcttt gagatatcaa tacttaaata cgctaaaatt agattaaaaa taaaaattat
    45781 ccctgctaat atcaaatcaa ttttccttta tcttttgcgc cgctttcctg cctacaagca
    45841 ttgtaagatc tttaaaatca gccttatata tagattcaaa atttccataa tacgctaaaa
    45901 gtttttgcat aacccctgaa ctaagtccta aatttgcaag cttagaactt ttcaagtcct
    45961 gttttttctt agtattttga tgaaagctaa tagcaaaacg gtgtgcttca tctcttaatt
    46021 tctgtaagaa ttgtagtttt ttatcgttaa tgcttagact aaattctcct tttaaggaat
    46081 gaattttatc cttagcaccc cctttagctc tatgtgcttt tgcatcgatt ttttcttttg
    46141 aaatagctaa aatatcgaca tttgccccac tacttacaat gatttcttta gccaaatcaa
    46201 gcaaagcctt tcccccatct ataagccata aatcaggagg aggtatttta tcaaagtcca
    46261 aagccctacg cgttaaaact tcacgcattt gatcatagtc atttttatgt tttaaatgaa
    46321 atttacgata ttttgactta tcccaagaat ttattctata agttaccata gctccaacat
    46381 ttgccacgcc ttgcaaatga gaattatcaa aaatttctat atcatttggt aaattttcaa
    46441 gctcaaaata agactttaat tctttttgta tagtaaaatc atgatttttt tgctcttttt
    46501 ctatatttaa aagggcattt tgaaaagcca aatcacaaat tcttcttttt tctcctattt
    46561 tagggatttt aatactgatt tttttatcaa acctttggct taaaatttct tctaaaagca
    46621 ctctatcttc aaattcttca taaacataaa taacatttgc aagcaaagga atatccatgc
    46681 taaaattttc taaaatcagt tgcttataaa tttcattttg atcccattgt atatcatttt
    46741 ttataggagt aatcttagaa tttgcactga taatttttcc attttgcacc acaaaacgca
    46801 aggttgaaag cacggaattt ttaaaagcta aagcaaatac ttcaaaatct tctaattttg
    46861 caatatctat ttcaacctta acttccaaat ctttaatcat tgcaatctga tctcttactt
    46921 tagctgcttc ttcgtaattt tcattttgtg ctaaaacaag catttgtttt tctaagtttt
    46981 taagcaaaac actaggattt aaaagtgcgt gtatagcctc atctaaaatt tcaaggtatt
    47041 tttccctgct gatgagttta tcacaaggcg caagacaacg agaaatttga taaaaaatac
    47101 aaggggattt acaacttgct ttttgcttta aaggatagta taaataaagc gcatctaaaa
    47161 gctctctagc gcctttaaaa aaagggccaa aatatttaat tttgcttttt tttactaatt
    47221 ttctagtgat ctcaaagcgt ggaaattctt cttcaaaatc cacataaata taaggataag
    47281 ttttatcatc tcttagcaaa atattatatt ttggatgcag ttgtttgata aaagaatttt
    47341 ctaaaatcaa agcatcagcc tctgaattag tagcaataaa ttccaaatgc actgtttctt
    47401 caatcatttt ttgaattctt aaagaatttc ttggatttgc atgtaaattt ggagtaaaag
    47461 caaaataaga tctaacacga tttttaagat ttttagcctt gcctacatat aaaagctttc
    47521 cttcttgatt gaagtattga taaacgccag tactattagg aagagttttt aactcatttt
    47581 ctaaattctc tttagtcaag attagaacct ttttttataa gctctcttaa atcttcaaat
    47641 ttcttaaata attttttatc tttaaagcaa tttttaaatt cacccttaga aagctccaaa
    47701 taagaatttt tagagagttt ttcatcattt ttgtttttat ttgccgcata agtgtatttt
    47761 tgagaaaaga tttttatatc ttttatatca acaaatccac ttaaaggata tttctgccca
    47821 tatgctttta tgagaaattt aatataaatt ttgctatcat catgatttaa ttcttgataa
    47881 gctgctggat gtaaggttat tatatttaaa atatgatttt ttacataaat tttagcaatc
    47941 aaacgttgct tagcaagcgg aaaagaactt aaaaaatctt tgcaaaaaaa taaggttttt
    48001 aaaggcttat aatgaggttt atccatcaat tcattaataa cagcactagc atttttagtc
    48061 atcttaatat tatttctttt tcccataaga tgattttagc atttcttttc ttaattttct
    48121 tctgtgcttg cggatataaa ggcaaccctc aatacacaag ctatgaacaa aatggttcag
    48181 taaaaaccat taaaaaatac gaacaattac ataggtggta aataatgaaa aaagcagata
    48241 ttttagtttt agactttggc tctcaataca ctcagcttat agcaagacgc ttaagggaac
    48301 aaggagttta tgcagaaatt ttacctttta atgtaagctt agctgatatt aaggcgaaag
    48361 aaccaaaagg tattatttta agcggaggtc cagcaagtgt atatgcaact gatgcgtatt
    48421 tttgcgataa aggtatattt gacttaaatc tacctgttct tggaatttgt tatggtatgc
    48481 agcttatggc acatcattac aaagctacag tagcacctgc aggacataaa gaatacggca
    48541 aagcaaacat agaaattaaa aaagataacg ctttgtttaa aaatcttcca aaaaaacaaa
    48601 ccgtttggat gagtcattct gataaagtag aaaatttacc tcaaggtttt gaagttttag
    48661 ccacaagtga aaatagccct ttttgtgttt ttggaaacga agataagaaa ttctttgctc
    48721 tacaatttca cccagaagta caacacagcg aatttggcaa aaatatctta aaaaattttg
    48781 ctaaatatgc ttgcaattgt gaaagtattt ggaatatggg ttcttttgca aaaactcaag
    48841 cagaaaaaat ccgtgaagaa gtaggcaatg ataaagtgct ttgtgctgta agtggcggag
    48901 tagatagtag cgtagttgct gcacttttag ctagtgctat aaaagagcaa attatagtag
    48961 tttttgtaga taatggactt ttaagaagtg gagaaaaaga acaagttgaa tttatgttta
    49021 aaaacacttt aggcatcgat ctcatcagca ttgatgcaag tgaaattttc ttaagtcgct
    49081 tagttaatgt cacagatcct gaacaaaaaa gaaaaatcat aggaaatacc tttatagaag
    49141 tttttgaaga agaagcaaaa aaacataaag atgtaaaata tcttgctcaa ggcacacttt
    49201 atactgatat catagaaagt tctgttgtag gtgcaagcaa aaccattaaa agccatcata
    49261 atgtaggggg cttacctgaa aaaatgaatc ttaaactcat agagccttta aaagaaattt
    49321 ttaaagatga agtgcgtgcc ttaggacttg agcttggact tagcaaagaa gtagtttatc
    49381 gtcatccttt ccctgggcca ggtcttgcta tacgcattat gggagaagta aatcgcgcta
    49441 gcttagaact attacgcaag gctgatgtaa ttttacttga ggaacttaaa agtacaggtt
    49501 ggtatgataa aacttggcaa gcattttgcg tacttttaaa tgttaaaagc gttggagtta
    49561 tgggggataa ccgcacttat gataatgcag tttgtatacg cgttgtagat gcaagtgatg
    49621 gtatgacagc taccttctcg catttacctt acgaaatttt agaaaacata agtcgccgta
    49681 tcatcaatga agtagaaggt ataaatcgcg ttgtttatga tatctcaagc aaaccacctg
    49741 caactataga atgg
//
LOCUS       DAPIVO010000004        48039 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.004, whole genome shotgun sequence.
ACCESSION   DAPIVO010000004 DAPIVO010000000
VERSION     DAPIVO010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 48039)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 48039)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..48039
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.004"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            32..346
                     /locus_tag="RJ239_000222"
     CDS             32..346
                     /locus_tag="RJ239_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2325 domain-containing protein"
                     /protein_id="HDV7330382.1"
                     /translation="MSVLVIGADEITPIRAVLHDLGAKKIEHWDARNENRVNRKPIPC
                     DTECIVMLTSFLNHNTMKKIKNEAKKRKIPLVCAKRSVSCVYCEYCKIFNLNKEFSCY
                     KG"
     gene            349..1044
                     /locus_tag="RJ239_000223"
     CDS             349..1044
                     /locus_tag="RJ239_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330383.1"
                     /translation="MLFGFDDKQEFIPQIYRYLNNQELMLTFLTQYNASVDSALKIPL
                     LYAKNTKSLKMIFGNFLHNIMHVSFGKIQNINIKLNTYAFYFQKRKSLIFNTKISKNV
                     DLLRLLRIYLYGICFDAQILFSSYVYDKVSFQNNGKNIDQDGDLIIIDKKFAILPLCK
                     EINTHNLEIENEIYELLNLIKENNFEKFYIVCPRNKNFTHFIEIKHFLCDLNKTMLKL
                     VPYKISNQIIRRK"
     gene            1044..1535
                     /gene="fldA"
                     /locus_tag="RJ239_000224"
     CDS             1044..1535
                     /gene="fldA"
                     /locus_tag="RJ239_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HDV7330384.1"
                     /translation="MSVAVIYGSAMGNTEGAANTIASKLGISDVFNISDIDAAKMNSY
                     DKLICGTSTWGSGDLQDDWDGFDFSGLSLGGKTVAVFGMGDSESYSDTFCGGMGKLAQ
                     NLKDAGANLVGEVSTDGYTFEASDAVVDGKFVGLALDNDNQEDQTESRIDAWVEQIKP
                     YFA"
     gene            complement(1580..2110)
                     /locus_tag="RJ239_000225"
     CDS             complement(1580..2110)
                     /locus_tag="RJ239_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7330385.1"
                     /translation="MSKFALILSFFIALFMSACTNATFTQSFIQTSNEGIFIRSQKQQ
                     SFKISFQNPSQLQTTLDRDLALKLKNLGLKEVKENADYEILINLVDMKKHSYAQKITT
                     SARFFYDFDPLESDGEWMVENYYTMQVNLQINSKNHNSQKTSLLARTAYLGNKERCQL
                     SLENKIINQIVSFFYF"
     gene            complement(2116..2826)
                     /locus_tag="RJ239_000226"
     CDS             complement(2116..2826)
                     /locus_tag="RJ239_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HDV7330386.1"
                     /translation="MKKLSLILVCSASLFAASNSEISDFYSKSIKAQFPNATVSVSNR
                     QKVGNTGFESVIVSVELNGQKQENILFTKDSLITPDLIDLKTGISYAQEYEMKKFQEA
                     RENFTKNAKAVAQKETMVIALGDKNKPAIYVFSDPECPYCREHLAQIDDELKNYQVNY
                     ILTPVHGKSAFEKSALIYKEAKKAKNDKEKIAILNKYYDANIKNYPKVSDAELKEVFS
                     LYEKYRSLGLSATPTIIK"
     gene            complement(2875..4680)
                     /gene="selB"
                     /locus_tag="RJ239_000227"
     CDS             complement(2875..4680)
                     /gene="selB"
                     /locus_tag="RJ239_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HDV7330387.1"
                     /translation="MKSVIIGTAGHIDHGKTSLIKALNGFEGDSLKEEQERQITINLS
                     FSNLKLKDKNISFIDVPGHKDLVKTMVSGAFGFSVCLFVVDINEGLKEQSLEHLEILK
                     ILDIKNIILVLSKCDLCENIEQKSVEILEELKNLDYPILKVFHTSIKNNQGIEELKNY
                     LYTIENKENDEELIFHYYIDRVFSLKGIGTVVTGSLNEGSITLNEKIICLDTQKELIV
                     KNIQNHDTNLEQIKACNRVALSLNCDYKELKKGYLLSKKGYFKAFKECDALVKAKNLQ
                     NSKMIFCVGSRQIECKINILKKLENDEFFVHFSFDKNVFLSFDEAFILLQNNRVIGGG
                     KVLNPLSEPLKKEQKNKFLMFLKNKDFKAAFSFLKDAHKYGFGLLSSYQRFKLSHQKA
                     LKLAKELNQVFVDEKNLNVYHLQSLEEIKNFIKFILEKNPYAMLSAHSLALRITWASE
                     NFCELGLKEMSNLLDFQNGIYFKKGIDFEKLQEKNNNQMYEILKKQGIKPEAPYNLYD
                     FLELDRKSGDNILKKLTQKGLVVRLSHNLFIEKQALEKLMQECLNLLKNQSLDVQSMK
                     EYFNLSRKYAIAYLEYLDKFPQVSKEAEKRFLTNI"
     gene            complement(4677..5999)
                     /locus_tag="RJ239_000228"
     CDS             complement(4677..5999)
                     /locus_tag="RJ239_000228"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HDV7330388.1"
                     /translation="MNKFRTFPQINTLIEDESLKSYPFYIKAFFCKKVVAKLKENFFQ
                     DEISKDKLLLEIKKEIKTFYRKDLQSVINASGVVIHTNLGRSVIHEELYEACKDIICN
                     YSNVEFDLENGKRGSRYALVLEKLKMLFECEDALVVNNNAAAVFLVLNSLCYDKEVIS
                     SRGELVEIGGSFRVPEVIKAAGVKLCEVGTSNKTHLKDYEQAINENTALILKTHKSNF
                     ALMGFHSEVNIKDLHELAKEKELLSYYDLGSGWCENLNEKLIKNEPKIRKLVQECDIL
                     SFSGDKLFGSVQAGIILGKKELIEKLKQNQLLRMLRVDKLTLSFLNESLKAYLQKDYE
                     KIITLKLLNDDLSFIEKKALRVQKELKFQTQLKKSKSLVGGGSMPDKSLDTYILTFQG
                     DALKLQTRFRKENIIGRIENDEFVLDFRTIRENELQKLILTINQMENL"
     gene            6077..7738
                     /locus_tag="RJ239_000229"
     CDS             6077..7738
                     /locus_tag="RJ239_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HDV7330389.1"
                     /translation="MQDFVYIKNDVLIPLPDAIEILDQANDKEALICNDKNQKAQIYA
                     PEINFYLKNSQDEILEQSKNVLTLYEARASVYDLGLDLEQSKEVQNRLIVADGDAQTV
                     EFLKEHEFKVIALSSAEILAVFGSVGELCAVVKNQGEEVEIDFDFLLFKAEDLSVVRK
                     DFTRQSGCYNLLNFENLEVLFEFLQSKSPKYHYKTYISYNASVCQYHERRSEHCAKCA
                     EICPTVAILKDDENKHLEFSQVDCLGCGGCISVCPSGSLDYAPMPRESFFTLCEFYKD
                     KKILIIPKKMSLENLNLALPKDVLPFMIEGEKWLSSMHFLTLLQNSGANLVFYTDFVS
                     RGSNEAIVLLNTFFERKFQKKAIFVAKDEKELQNVLKEQEFIQDLKYDFHNNTLTTRE
                     NFAKRMQEMIKNEDFGSMESGEWLRYGKVEINPNTCTLCLSCVGACNVGALIADKQEN
                     ALKFNASLCTTCGYCELSCAEKDTLKLFRSGMEFRASYFEYQTMAKDELFACIECGKE
                     FATKKAVEKIANLMKPKFGNDENKIKTLYCCADCKAKVMIKAMIN"
     gene            complement(7731..8540)
                     /locus_tag="RJ239_000230"
     CDS             complement(7731..8540)
                     /locus_tag="RJ239_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDV7330390.1"
                     /translation="MKKILFLFCSFFLAFAKPSLEIPKLSKQAKQNFILENVKFNYNG
                     TIYKIFIAKNKNENSNYKYKIIYLLDGNAFFPLFLNLFNTPVKENLLIIGIGYDNNLA
                     FDTQKRTKDYTPTTNLNKQGGGSKEFRNFLITQLIPYINKMYPIDFSHQILFGHSFGG
                     LFAIDTLLYDSKIFSHYFIISPSLWWDNSEFLPNIIKLQTCPKIYIGLGSLETNSSII
                     KGVAKLNAQKLSEKISKETNCKTHFKLFKNETHGSVISKAMLWMKKLLDLN"
     gene            complement(8537..9832)
                     /locus_tag="RJ239_000231"
     CDS             complement(8537..9832)
                     /locus_tag="RJ239_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7330391.1"
                     /translation="MLNNVLPLSFIVGTRFFGLFIVLPVLSLYALKLEGANEFLVGLL
                     VGVYALTQMILQMPFGILSDKIGRKKTMLIGLIIFIIGSLICSFAENIYTMLLGRMLQ
                     GAGAIGAVATAMISDFITEENRGKAMAVMGSFIGLSFAASMVISPLMSAKWGLSSLFD
                     LSAALSLLCIILLYTVVPKENKITHENEKTPFFHLIKQKNLALMNLTNFMQKMLMSIA
                     FLSIPIILVKHLGFASDKLWIVYSASMVAGFIAMGFAGSLGEKKGLAKQILLLGIVFF
                     ILSYLFFAFSNSIDFFIIAVVIFFIGFNLHEPIMQSCASKFCKVHEKGAALGLFNAFG
                     YGGSFIGGIIGGIFLHLDTLNLLAIILVILALIWLVALFFLKNPADFKNLYLPLETPL
                     NFSTFGENLGVVDIYKNSKNLVVKFDSKLTSKEELEGKL"
     gene            9999..10601
                     /gene="rdgB"
                     /locus_tag="RJ239_000232"
     CDS             9999..10601
                     /gene="rdgB"
                     /locus_tag="RJ239_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HDV7330392.1"
                     /translation="MKIILATSNKHKVLELKEILKDFEIYAFDEVLMPFEIEENGKTF
                     KENALIKARAVFNALDEKQKKDFIALSDDSGICVDVLEGNPGIYSARFSGKGDDKSNR
                     DKLVNEMIKKGFKQSKAYYVAAIAMVGLMGEFSTHGTMHGKVIDTEKGENGFGYDSLF
                     IPKGFDKTLAQLSVDEKNNISHRFKALELAKIILKILNKG"
     gene            complement(10632..13103)
                     /locus_tag="RJ239_000233"
     CDS             complement(10632..13103)
                     /locus_tag="RJ239_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RND family transporter"
                     /protein_id="HDV7330393.1"
                     /translation="MFAKLLKFFISRPKSTFFGTLFICLFLSFFAFKLSVDASAESLL
                     LEDDADLKTFREISKHYKSDNFLLLAFKPYDEKPFSNENLAKLKKLHEELEKAPLVER
                     VFSIINAPLLQSSQNTDLKELLKNIPNIESQDINRTKAQNEILNSPFYKNNIISKDGK
                     VTGLIIYLKPDTVYNNLIEKRDLATDEKEKDQIRLAIKEHQDKQKVITKQSLDTIKSI
                     VRNYEKNKDTLYLGGVSMIADDMIAYIKSDLVLYGVSLVFLLGLALYYFFRSWRFVFL
                     PLFICFISLSAASGVFALLNFQITVISSNYVALVLIITLSVVVHLITHFIESTQNHPK
                     AKVERIVLETLLAKANPSLYAIVTTMIGFFSLILSNIEPIIKLGIMMSIGIGLALIFS
                     YLFLASILVLLKPKNYHKKEFKFNLLAFCAKTALDPKKRRMIYEISVLAIILALIGIS
                     KLRVENSFVNYFKDGSEIKKGLLVIDKNLGGTLPLEVIIRFPNNKNDQNASDTLDSFE
                     SEFENLATQETYWFDSKKTRIAKKVHEFLENKEFVGSVLSLNSLLTLGKNINDGKELD
                     DFALAFLNENLPAKFKQDLLSPFVSIENNELRFSMRIVDSDPNLRRNEFLIDLKKQLN
                     ELVKNDGVEVQITGIMVLYNNMLQSLFSSQFDTLIFVILAIFILFIIVFRDLKFSVAA
                     ILVNVIPLSVVFALMGLLGIPLDMMSITIAAIAIGIGVDDAIHYIYRFREEIKNKSLE
                     EAIMISHLSIGSALYYTTISIVLGFSVMMSSNFIPTIYFGILTVFVMILLLSGSLFLL
                     PSFLITIYSKKTKFPNQHKEHILKQ"
     gene            complement(13103..13672)
                     /locus_tag="RJ239_000234"
     CDS             complement(13103..13672)
                     /locus_tag="RJ239_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HDV7330394.1"
                     /translation="MKKIFLILTLFFNAFALQLDEISSTMQKNIDASLKLLQDNKEDK
                     KQAANGIFKLFDSIIDYKLMAKLSLSKNYSKLTPKEQEKFTTAFETSLKKSFTDKLSL
                     YKDQVLKVKNGELKNEKRYFLTTSMVVDGEEKNIIFKFYNDNNNWLIYDVDVLGVSIV
                     QTYRSQFGDILANQGFDALLQKLESIVIE"
     gene            complement(13682..14380)
                     /locus_tag="RJ239_000235"
     CDS             complement(13682..14380)
                     /locus_tag="RJ239_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HDV7330395.1"
                     /translation="MRIKFISFILIFFTIFAFAKEQNLDDFEQEYQNYQVNDPLSGYN
                     KAMTSFNVALYDYGLRPVLKGYNAITPEFIRLGARNFFDNLLAPLRFVSNVLQFKFEE
                     AGEEFKRFTANTIMGFGGLMDVASKMGLKKHPADLGTVLAHWGVGSGFHIVLPILGPS
                     NLRDTLTLPATWYASFTAYIDPTWASIAISAYGFGNELSFRLDEIDEIYHNTPNLYPF
                     LRDAYEQRRNELSK"
     gene            complement(14425..14868)
                     /locus_tag="RJ239_000236"
     CDS             complement(14425..14868)
                     /locus_tag="RJ239_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HDV7330396.1"
                     /translation="MIFYSYEEFKEDVKILAKEIKEDFNPDALLAIARGGMSLGHSLA
                     VALKTRQLFALNSIHYDNTKKLDTIEIFNIPDLSKHKKILLIDDIVDSGESLAEIKKV
                     LLEKFPHIELKITTIFYKKTALLEPDFKVKEATEWVDFYWDINLD"
     gene            complement(14882..16201)
                     /locus_tag="RJ239_000237"
     CDS             complement(14882..16201)
                     /locus_tag="RJ239_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HDV7330397.1"
                     /translation="MSFFKLKENNTSFKTEVIAGLTTFLAMVYIIPVNSSIVGNTGMP
                     IEALITATALITIVASAFNAFFANTPVAMSVGMGLNAYFTFAVCLGQNIAWQSALGAV
                     FISSIIFLILSFTHFRLWVIRNIPKDLRLAICAGIGCFIAFLGLSQMGVIMHNKDTLV
                     SIGNFKSPHVLFGIFTLALIIFFWAIKLRGAFILGVLASSIIAWIFHLDNASFPVQIF
                     SWPNFSMENGLGAIFLQLDIKSALNITMIPIILTFFITQLFDSIGTITGVGERGKIFD
                     DPKNGEKKLSKTLMADATGSALGAMTGTSTVTAFVESTTGVESGGRTGLTALVVAICF
                     AFTLFLLPLFKAIPANAIYPVLVMVGILMFMEVKNIDFKDSAIAVASFFTIIMMPFTY
                     SITTGFAFGFLSYLLVRIFKREWDKINLGIIVLSLLSLGNFLLMALQ"
     gene            complement(16211..17275)
                     /gene="mqnE"
                     /locus_tag="RJ239_000238"
     CDS             complement(16211..17275)
                     /gene="mqnE"
                     /locus_tag="RJ239_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminofutalosine synthase MqnE"
                     /protein_id="HDV7330398.1"
                     /translation="MKNLITKLENEERLNQEEANALWDLDLFTLGKYAHKKRTKLHGK
                     KVYFNINRHINPTNICADTCKFCAFSAHRKNPNPYLMTHEEIMKIVDETVKRETKEVH
                     IVSAHNKDTTWQWYLEIFKMIKEKYPNLHVKAMTAAEIDFLHRRFKMSYEEVIEKMLE
                     YGVDSMPGGGAEIFDEEVRKKICHGKVSSENWLKIHKLWHEKSKQSNATMLFGHIEER
                     HHRIDHMLRLRDLQDQTGGFNAFIPLVWQRDKSFIQTDKIMDSEEILKTIAISRLVLD
                     NIKNIKAYWATMTLNLAMVAQEFGANDLDGTIEKESIQSAGGAKSAKGTSLKTFIDMI
                     KTSNLIPVERDSLYNELKTY"
     gene            17419..19767
                     /locus_tag="RJ239_000239"
     CDS             17419..19767
                     /locus_tag="RJ239_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HDV7330399.1"
                     /translation="MLNKELEIFKKNLSSYTQSCRKFFLKQGAFSLYHSKNMDNFIKK
                     AYDIVLKDYFDDFSPPSDNIPFCVLASKAYANNSLCFNESISLIFVYKDIKAFHLKPM
                     IKAFIEILNDAHLQIDSVILEFNGLYNASNELKTSIIQTRFICGSRILFKGIKIKFES
                     IIKENKNDFAKLLLENFKEFDIPFIKQEFNILKDFGGLNHLRSLESLLVLFKTSPKNY
                     ALNFIDEKKLSELRLAGDFLLSLKSAMNLLSAKDEDEFLLINVHDLSELMYKKAKKHF
                     GANELLVQKALQSMHTIGFYTHFLAKQIQDGLNHTLKQEYKFKTLVEVLEYLLKLEDK
                     HVIFDLNLVFALGRLKYGKKDIEKALILFEKIFYKRHSFCVLKLLLDSGILKDLCKPF
                     WTVRFLSDEEGNYSFDEQVFLMLSEFEKYEDELEILQKLKTDEKMILKLVILLSAIES
                     ENEISLAGIYRAYCSKFDLKNEILEWGLKIFKNNNALKDLVEKEDIYNPIVVSSLVSK
                     LENLENLELLYTLTWLKAKALNYNAFYFRVLDKLLENAKQGFEDENLLEESARRVKKE
                     LTLKRSKIFLEQDEILQDKIIHIKSNLFIIKNTFEDIVMISKLAKENDFKFWFSNETN
                     LSLQIVAPLHFNIAIILSSLTNLNLIFMNFFELFDDKIYLRFEYDNIISDEQKLKLCE
                     LLNSNLSGFNLKKIKKPIIKKDELKLDLNYSKMYAKLGLNTKDQQGLMAYLMNVFNEL
                     ELVLCAAKIQTIRQRTRNIFIFQKNEKLEHSEQKLVNLLISE"
     gene            19772..21568
                     /gene="glmS"
                     /locus_tag="RJ239_000240"
     CDS             19772..21568
                     /gene="glmS"
                     /locus_tag="RJ239_000240"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HDV7330400.1"
                     /translation="MCGIVGYIGNNEKKQIILNGLKELEYRGYDSAGMAVMQEGELSF
                     FKAVGKLENLANKCTDFESQGYGFAIGHTRWATHGKPTEINAHPHLGQYSCVIHNGII
                     ENYKEIKDKLEKEGVSFLSQTDTEVIVQLFEFYARNLGVFEAWQKTIKELRGAFATLL
                     VTKKDPNHVYFAKNAAPLIIGKNANKEWYFSSGDAPLIGSCDEVMYLEDLSLGYASKD
                     ELVVYENDILKSLCFSKLSGDKAYAKKDGFRFFMEKEIYEQSRVMSEVLMGRIQGDEV
                     VFDELNNEDLSQVDEITLCACGTSYHAAMASAYLFERIAKVKAKVEIASEFRYREAII
                     KKDSLFIVISQSGETADTLEALKIAKEQGAKTFAICNVDNSNIVRLAHLSLLTRAGIE
                     KGVASTKAFATQVLTLWMLAIFMAQKRNLNVSAEIKALLHTPNCVSVKQALHEKIHRL
                     SKRYLDGHGFFFIGRDVFYPLALEGALKLKELSYLHAEGYPAGEMKHGPIALADSKLY
                     TIALMPKHMLYEKTKSNVEELIARDSTVLSISPLEFDLSDDFIKTNEQDHYMCEFFEM
                     MVITQLLAMEISIRLGNDVDMPRNLAKSVTVE"
     gene            21571..24696
                     /locus_tag="RJ239_000241"
     CDS             21571..24696
                     /locus_tag="RJ239_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDV7330401.1"
                     /translation="MKNFFCLTLVCKLFALSEFELHHIDKVHKLGYSGDTIIIGVADD
                     AFNQDHISLKDKILKSTYPTDTAGKQLIPDLKKSTHGSHVAGIAVGAKIGDSKPYGVA
                     YGAKFYGAGVFPNGSYTQIPDIYNFFKDVSIINNSWGINFYPYFNLKASNSGLVDCTQ
                     TNQGTSYNICNTPLEYVMKADKVANDMMRLSKDKGVLNVFAAGNEGILSPALHAILPS
                     YDESLRAWLAVGALDANEITLESDGTLIIKSQGLADFSNGFKGATNFSLVAAGVNINN
                     VDSSTNDKFTKKSGTSMAAPMVSGTAALVKQNFPFLDGKQIADILLSTANKNYKAPKF
                     TVKQVTDGTNQPKFLIVYISQDPPGIEDEIKRDLKQLYNGIQVQVNGQWIDYSDYIWD
                     NRDSAQSQKLNTSTISSINGVVRVEKEELFGQGILDAQKALKGLSILDANRLSDQDVL
                     KYEQEPNTAYYTINTAGYDAEFSNDISQRKWDESTHLSSAINKPTHLANLNIGLSKEG
                     EGILIISGQNTYEGATLIKQGELKLKGKVKNNAYVEQKAILSGNGIVGQNLNNKGIVR
                     PGNEDLNDLTVQGTYTQEGVDSKLQLDFGNYKNSKLIAKTYDIKSGNLEYIPLPKYYI
                     LNKPVKINLGDLEKSLSSFNHVLIQNTYALNFDFVLSDDLVSINKTLIKPNLKPNAYE
                     IPNTSLGNALRQLRSRADLSQTYQEFFASLDNGIDVKTKLNRIEGSGYLSTFSNHNQS
                     NLMQNNMLFTLHPLNINNFAQNNNILLASTYLPRIFSNEEYFWHLTPSYKYYKDKDFS
                     GQKTGANISLGENFSSGFLAYALSLSSAKFNFNNGSDLKSYNMDLLLNYNHDLDFIKI
                     LSGLGIGVGFNTLNRFVVEQPIEGKYKTLQTSAQLGVTKDIILGQDFIFNPLMYFTHS
                     FFYQEDFKENKSPFAKNYESLKHHSINANLGFNLAKNIEQDDYQASFSTFVIFEKRIY
                     GRTLENKASFVDFPIAFIQKYKLKDNILSQGFNSEFLYKNNVFWQFMLMNRFSHNAYE
                     LHLMSSVGKRF"
     gene            24752..26143
                     /gene="fumC"
                     /locus_tag="RJ239_000242"
     CDS             24752..26143
                     /gene="fumC"
                     /locus_tag="RJ239_000242"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HDV7330402.1"
                     /translation="MEYRVEHDTMGEVKVPNDKYWGAQTERSFENFKIGCEKMPKVLI
                     YAFANLKKSLALVNNKLGKLDDAKKNAIVQACDEIIAGKFDDNFPLAIWQTGSGTQSN
                     MNMNEVIANRATEIMGGDFRKEKLVHPNDHVNMSQSSNDTFPTAMSIVAVEQVEKKLI
                     PALDELIATFEKKVKEFDGIIKIGRTHLQDATPLTLAQEFSGYLSMLLHSKEQIIASL
                     PTLRELAIGGTAVGTGLNAHPELSQKVSEELTQLIGTKFISSPNKFHALTSHDAINFT
                     HGAMKGLAANLMKIANDIRWLASGPRCGLGELIIPENEPGSSIMPGKVNPTQCEAVTM
                     VAVQVMGNDVAIGFAASQGNFELNVFKPVIIYNFLQSLDLLADSMHSFNIHCAVGIEP
                     NRAKIDHNLHNSLMLVTALNPHIGYENAAKVAKNAHKKGISLKESTMELGLVSEEDFN
                     KFVDPTKMIGPKA"
     gene            complement(26173..27216)
                     /locus_tag="RJ239_000243"
     CDS             complement(26173..27216)
                     /locus_tag="RJ239_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDV7330403.1"
                     /translation="MQNGKFFLISFILVILFLLLYLFKGFLLVIIIASLMAVATSNIN
                     AKFLNLTKGHKFLASILTTTCMVLLFFAPFVYAMIELAKALKNFDINLVTQTLDYVKN
                     YQFTLPESFNFLEPKIKEFLASIDLNSISKQILSYASSFTKSGAKFLIDMVLICVFYF
                     FANLYGTELVIYLKSIIPIDKKELDDVLSEVGNVMAVVLYSMVIVAIFQGALFGLITI
                     FYGYDGILMGVIFAVSSLIPAIGGALIYMPVSLYEFASNNLNSALVIFIYSVIVISFI
                     ADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGIILGPAILTFFVST
                     LRMYVILKDKNLI"
     gene            complement(27220..28227)
                     /gene="ruvB"
                     /locus_tag="RJ239_000244"
     CDS             complement(27220..28227)
                     /gene="ruvB"
                     /locus_tag="RJ239_000244"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HDV7330404.1"
                     /translation="MDRIVEIEKYSFDETYETSLRPSNFDGYIGQESIKKNLNVFIAA
                     AKKRNECLDHILFSGPAGLGKTTLANIISYEMSANIKTTAAPMIEKSGDLAAILTNLS
                     EGDILFIDEIHRLSPAIEEVLYPAMEDYRLDIIIGSGPAAQTIKIDLPKFTLIGATTR
                     AGMLSNPLRDRFGMQFRLEFYKDSELALILQKAALKLNKTCEEKAALEIAKRSRSTPR
                     IALRLLKRVRDFADVNDEEIITEKRANEALNSLGVNELGFDAMDLRYLELLTAAKQKP
                     IGLASIAAALSEDENTIEDVIEPYLLANGYIERTAKGRIASAKSYSALKLNYEKTLFE
                     E"
     gene            28318..28728
                     /locus_tag="RJ239_000245"
     CDS             28318..28728
                     /locus_tag="RJ239_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphotransferase"
                     /protein_id="HDV7330405.1"
                     /translation="MGILTKLELDYEIDDIEKFLQFFRTMCDRFEPLIIKLGSDSVRY
                     KEAIKELETLAHNTAWAARRLNLEEVTDFCVFCEEMMAQANRFNGPASDEFTDWMLLM
                     SDQFEKYCRSYENDDSVLAVFNPLIVNVPNIISK"
     gene            28729..29087
                     /gene="ssrA"
                     /locus_tag="RJ239_000246"
     tmRNA           28729..29087
                     /gene="ssrA"
                     /locus_tag="RJ239_000246"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(29172..31256)
                     /locus_tag="RJ239_000247"
     CDS             complement(29172..31256)
                     /locus_tag="RJ239_000247"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA degradosome polyphosphate kinase"
                     /protein_id="HDV7330406.1"
                     /translation="MQTSPDMFINRELSWLRFNSRVLDQCSKNLPLLEKLKFIAIYCT
                     NLDEFYMIRVAGLKQLFSAGVNASSSDEMTPLQQLKAIRKYLHQEKELLERYFNEITS
                     ELEKENLFIKHYENLDENLKQKCDEYFFSNIFPVIVPIAVDATHPFPHLNNLSFSLAV
                     KICDKSHPELVKFGMIRIPRVLPRFYEVSANIYVPIESIVHQHAEEIFPGYKLLASAA
                     FRVTRNADMVIEEEEADDFMMILEQGLKLRRKGAFVRLQIQKDADEQIVEFLNTHMKI
                     FHKDVYEYSILLNLPSLWQIAGNKTFTHLLSPLYTPKTLPPFDENLSIFDAVEKEDIL
                     IIQPFESFDPVYKFIKEASKDPEVISIRMTLYRVEKNSNIVQALIDAASDGKQVTVMV
                     ELKARFDEENNLHWAKALENAGAHVIYGITGFKVHAKVSQVIRKQGDKLKFYMHLSTG
                     NYNASSAKIYTDVSYFTSKAEFARDTTSFFHILSGFSKNRRLQTLSMSPNQIKEKVLE
                     MIRIETSKKNEGVIVAKMNSLVDSDIIQALYEASMEGVQIDLIIRGICCLKPDEEYSK
                     NIRVRSIIGKYLEHARVFYFKHSEPNYFISSADWMPRNLERRLELMTPIYDERSKAKL
                     AQFLRLQLSDNVLAYELKNNGEYEKIPSSEKIIDSQQTLEEYVSKIYKTLKKDTDQSR
                     ATHLASKLFKEN"
     gene            31445..31960
                     /gene="nrfH"
                     /locus_tag="RJ239_000248"
     CDS             31445..31960
                     /gene="nrfH"
                     /locus_tag="RJ239_000248"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase small subunit"
                     /protein_id="HDV7330407.1"
                     /translation="MIILRRKILKKTSNLFTIFLVLLFVFFAVGFYTFYNAKGTSYLS
                     NASESCNNCHIMNEVYNEYMAGPHSQKVKGEPRATCVDCHLPHNFVAKWIAKAQSGLG
                     HAYAFTFKLDELPTNLSATEKSRKMVQENCIRCHADFAQTAINATTNPHADKSLNCAS
                     CHKDVGHKHGI"
     gene            31975..33807
                     /locus_tag="RJ239_000249"
     CDS             31975..33807
                     /locus_tag="RJ239_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming cytochrome c nitrite reductase
                     subunit c552"
                     /protein_id="HDV7330408.1"
                     /translation="MKKNILRLGIVVLVLLIAGVLWLNNDINQKKEDEANKNAIAANA
                     DFSLLSDDDPNFEKWGKVFPEQLKMYLTVEKEEPKATEFGGNLAYSKLIRFPQLTILW
                     AGYPFSLDFNEERGHFWVQVDQMKTARNNKDFLNAHGLAAFKGQPAACMNCHSGWTPW
                     LIKNVAKGDFTAFNSTNYWTMIKNIPAVDGIVENSPEHAGPHGGKRMGVTCADCHNPN
                     DMSLRLTRPAAINALVSRGYEKDPVQGVKATREEMRTLVCSQCHVEYYFKPTGEKVKV
                     MGETIVDDSSKKWWNGTQKNYDEYEFWRDGNKVKEIETDGIVLTFPWSEWKKGQPFRI
                     EMLDDYYDKVRGVFGADFTHKLTGAQIIKIQHPESELYSGGVHAANGVSCVDCHMPYV
                     REGAKKVTQHNITSPLRDINSACKSCHKQSEDYLKAQVLDIQNSVAHDQRTAEYAIVS
                     LIMDTKKLRDELGNMEKFQSDGKADAKKISEELKEVLELHRKAQMRADFVNAENSTGF
                     HNPREASRMLLQAVDMARMGQTKLVEIAAANGIKDFKTSNLGFEDIQKFNPGELYYKV
                     DVNNHKAGERYYADEKDVNGNPPKELLEHDKELAPYNYQVIDKK"
     gene            33943..34497
                     /locus_tag="RJ239_000250"
     CDS             33943..34497
                     /locus_tag="RJ239_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330409.1"
                     /translation="MINKNKLFRQVHIYLSLFFLPCALLFALTGIAYIFGINQDVGLK
                     VEQYQLSKVIESGKEREALIEYLKTNGLKVPSNTNIIKSKDKGITIGGTHYSANITQN
                     STNEYNITLKTRSLLGDMIMLHKDKGAWYFSVLSVGFGITLFMLYISGLMITLFANKK
                     DRSKQFAVLGVGVVVTLLLAYLSL"
     gene            34561..34650
                     /locus_tag="RJ239_000251"
     tRNA            34561..34650
                     /locus_tag="RJ239_000251"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:34595..34597,aa:Ser,seq:gct)
     gene            complement(34723..35742)
                     /gene="ceuB"
                     /locus_tag="RJ239_000252"
     CDS             complement(34723..35742)
                     /gene="ceuB"
                     /locus_tag="RJ239_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterochelin ABC transporter substrate-binding
                     protein CeuB"
                     /protein_id="HDV7330410.1"
                     /translation="MYLFLKRRKYEKIFSFCIFCIFLSLILTACNSNSNENNASSTTK
                     TNTATVKVLPISMSDEGDSFLVKDSLGENKIPKNPSKVVILDLGILDTFDALKLNDKV
                     VGVPAKNLPKYLQQFKNKPSVGGVQQVDFEAINALKPDLIIISGRQSKFYDKLKEIAP
                     TLFVGLDNANFLSSFENNVLSVAKLYGLEKEALEKISDIKNEIEKAKSIVDEDKKALI
                     ILTNSNKISAFGPQSRFGIIHDVLGINAVDENIKVGTHGKSINSEFILEKNPDYIFVV
                     DRNVILGNKERAQGILDNALVAKTKAAQNKKIIYLDPEYWYLASGNGLESLKTMILEI
                     KNAVK"
     gene            complement(35727..36482)
                     /locus_tag="RJ239_000253"
     CDS             complement(35727..36482)
                     /locus_tag="RJ239_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7330411.1"
                     /translation="MIKLKNITKFYDNKVIISDLSLDFHKGKITSIIGANGAGKSTLL
                     ALASRLIKPSSGEIYIDGMNLKNYKEQILAQKISILKQQNNINLRLKVEELVAFGRFP
                     HSQGRLNTNDKIKINEALEYMELSNLRNEFLDTLSGGQKQRAFIAMIIAQDTEFIMFD
                     EPLNNLDMKHSVQIMQLMKNLVKDFNKSIAVVLHDINFASIYSDEIIALKDGKLLKQG
                     SKDEIINQENLKQIYDMDIPVSQINGKKICIYF"
     gene            complement(36479..37417)
                     /locus_tag="RJ239_000254"
     CDS             complement(36479..37417)
                     /locus_tag="RJ239_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HDV7330412.1"
                     /translation="MRKKMLILSFLTLNMIGIFIFVGLNGFDEYALKSRFLQIAAIII
                     VAICIAVSTVIFQTLCNNKILTPAIIGLDSLYMLLQSALIFSFGAANLSVYKNDINFL
                     ITLVCMVVFSLGLYKILFSSDRSIYLIMLLGLVFGTLFSTLSSFFEVLIDPDEFMVIQ
                     GRMFASFDNIAFDVLILAYIISFLSFIWIFRYMKFLDPLNLGKDLAINLGINYQKISK
                     QLMIIIAILTSISTALVGPITFLGLLVVNITYELFKTAKHSILLSACILISILALLGG
                     VFFVSRVFDYNATISVVINFLGGIYFIYLVLKGNKL"
     gene            complement(37410..38378)
                     /locus_tag="RJ239_000255"
     CDS             complement(37410..38378)
                     /locus_tag="RJ239_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7330413.1"
                     /translation="MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQL
                     EIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKFVSPTTAGTMDCAKFGILISLIF
                     FTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
                     YALNYIQNIQGWLQGSMANVIQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNL
                     GISYNGILFLGLMIVSIITSLVIVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALC
                     GALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKVYA"
     gene            complement(38464..39453)
                     /locus_tag="RJ239_000256"
     CDS             complement(38464..39453)
                     /locus_tag="RJ239_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HDV7330414.1"
                     /translation="MRKIALFLSLCVFIWASDLQQALEYEKQGDYKKAMEIYKKLALK
                     NSSVLISQEQNNSSQATQMQNSITIKKEEKQDFSRLALANYLGENESFNPLGISSYKM
                     NYFLPFTYSFNSLGTNNNKSEAKFQLSVKKRLFENLLGLDEKYYIAYTQTSWWQIYEH
                     SSPFRETNYQPEFFIDLPLYLKDYEFFNNLRVGILHESNGKGDENLQSRSWNRIYVST
                     AILYNKFLFVPRLWYRIPENKKDDDNPAILHYMGNFDVNLAYLGDDYFINLMLRNNLK
                     FHNNKGAIQVDLGYDIFNNGIYWYLQYFNGYGESLIDYNKHLQRLSTGFLISY"
     gene            complement(39450..40025)
                     /locus_tag="RJ239_000257"
     CDS             complement(39450..40025)
                     /locus_tag="RJ239_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HDV7330415.1"
                     /translation="MQLNELNCVILCGGKSSRMGQDKSKLILKNQNLTQFQVEKFSKI
                     FKNVYVSAKEDKFENHFSLIKDSLEFEVYSPMLALYSILSNFKNEFVFVLSVDSPKVG
                     ENELLKMLPFLEQNYKIIIAKTPLHKHPLCGFYHSSLAQTCKNFLEKNEQKIGLLFSE
                     IKTKFVEFEDEDAFLNLNFYEEYEKFKSELK"
     gene            40087..41394
                     /locus_tag="RJ239_000258"
     CDS             40087..41394
                     /locus_tag="RJ239_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NFACT family protein"
                     /protein_id="HDV7330416.1"
                     /translation="MKYTELLQLQTFFSQFKKIDFIKRINDNILELSFDRERFIFDLT
                     RAMSAIYTAKFNAKNYNAPFDFMLKKYFSNAFIKEVKVLEGNRILCFSVKANKAYKSY
                     ESKIYFEFTGKNTNVILTDEKDLIIEALRHIDKSYRVVKPNVILEPLKPYKMDENFEE
                     IKDFADYFSRKFTSIYESKIKQIKNLKLAQVDKKIQNLQELFSSLDEENSLLLKALEY
                     RKRADVLFANLSVLKDYEREFKLDDFEGKELEFKLEFSPKRSANLYYKNAKKLEQKAK
                     NLNIQRQNLKEKLDFTLSLKELLLQAKSEIELEILLPKKNSKKNQDYKQEDLVANFYY
                     NEFKICVGKNEKGNEFLLKNAKKDDLWLHVRDIPSAHTLIVSNKQKISLDVIEFAARL
                     CVSFSKLKKGSYWVDYTLKNFVKVQQKAFVNYTNFKSINITKD"
     gene            41396..41734
                     /locus_tag="RJ239_000259"
     CDS             41396..41734
                     /locus_tag="RJ239_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330417.1"
                     /translation="MPVSPLGNINYINQNMAYPATQASNELAKEGFAATLNMAEFNEK
                     EKTLNKLEKVNETHEIKEEIKEKAEQEEKKKKHNQEAKTSDDEKNEEDESKDPNFKDA
                     QSIHRLDISI"
     gene            41743..42468
                     /locus_tag="RJ239_000260"
     CDS             41743..42468
                     /locus_tag="RJ239_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HDV7330418.1"
                     /translation="MFNTTRIISALVMIGAIIIIALIDQFFINFIVFAVLLYLSFSEA
                     KKLFALENISIIPLAIAFILGSLSHKALLFGILALLLVVGYLVYKKASLKPALIYIYP
                     SLPILALWQVYLDQGMFALFWLIIIVAACDSGAYFIGKLMGKTPFSPTSPNKTLEGVI
                     GGLICASVIGTILGIFVYSFWLSLLCSFFVAIFAVIGDLFESYFKREAGVKDSGDLIP
                     GHGGVLDRIDAVIIAAFVMVTFL"
     gene            42465..43535
                     /locus_tag="RJ239_000261"
     CDS             42465..43535
                     /locus_tag="RJ239_000261"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HDV7330419.1"
                     /translation="MILFGSTGSIGVNALKLAALKNIPISALACGDNIALLNEQIARF
                     KPKFVAIKDSKNKHLVKHDRVFIGQEGLEQILTECQDKLLLNAIVGFAGLKSTLKAKE
                     LGKNIALANKESLVVAGSFLKGAKFLPVDSEHAALKFLLEGKKNIAKLYITASGGAFY
                     RYKIKDLNQVSVKDALKHPNWNMGAKITIDSATMANKLFEIIEAYHLYDFKEIDALIE
                     PRSLVHAMCEFKNGASTAYFSKADMKLAISDAIFEKQDTPILEAVDFSKMPALKFHPI
                     STKKYPIFKLKNTFLKEPNLGVIINAANEVGVYNFLENKSGFLGITKCIFKALDHFGV
                     PKISSIEEVFEYDFKTREYLRS"
     gene            43537..44931
                     /locus_tag="RJ239_000262"
     CDS             43537..44931
                     /locus_tag="RJ239_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deacylase"
                     /protein_id="HDV7330420.1"
                     /translation="MKFFLTILFFITSIFALELDFSVGENGKSLDDNNTVLIFGGIQG
                     DEPGGFHAASLLLSDYNITKGKIIVAPNLAFDSIIKRSRGNNGDLNRKFASISPKDPD
                     YKTVQRIKELILLPEVSMVINLHDGWGFYKPTYIDAMQNPKRWGNSSVIDTSEINASK
                     YPDLENIATQTVNSVNSSLADPKHAYHLKNTKTQELGDMEMLKALTYFVISNHKAAFA
                     NEASKNLPVNLRAYYHLLAIENYLKTAGIEFSRDFELTPQGVDKVINKELEVKLFDDR
                     ILLSLKNPRKLINYVPFPVNKELNYNTSNELTAIIAEGNSFYIQYGNRFQTRLYPEYL
                     EFSDAFNEVTFQVDGNETTVPFGTKVKVKENFLIPKIANVRVNIIGFDHSKDESGILV
                     HKKNMQTQYSLDMAGKIYRVEFYELRGANLQQLLEANTNSKLIKNAKNLDLNTLKMAR
                     SKDKFLGSILVEFE"
     gene            44928..45935
                     /gene="tsaD"
                     /locus_tag="RJ239_000263"
     CDS             44928..45935
                     /gene="tsaD"
                     /locus_tag="RJ239_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HDV7330421.1"
                     /translation="MKNLILAIESSCDDSSIAIIDKNTLECKFHKKISQELDHSIYGG
                     VVPELAARLHSEALPKILTQCKEHFKNLCAIAVTNEPGLSVSLLSGISMAKTLASALN
                     LPLIPINHLKGHIYSLFLEEKISLDRGILLVSGGHTMVLYLKDDANLELLASTNDDSF
                     GESFDKVAKMMNLGYPGGVIIENLAKNAKLKNISFNTPLKHSKELAFSFSGLKNAVRL
                     EILKHKNLSDDIKAEIAYAFENTACDHIMDKLEKIFNLYKFKNFGVVGGASANLNLRS
                     RLQNLCQKYNANLKLAPLKFCSDNALMIARAAVDAYEKKEFVSVEEDILSPKNKNFSR
                     I"
     gene            45936..46451
                     /locus_tag="RJ239_000264"
     CDS             45936..46451
                     /locus_tag="RJ239_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDV7330422.1"
                     /translation="MRKAFTILELVFVIVILGILAAIALPKMSSSKDEAEISKSLNNL
                     KTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLGNFNGTKEVNFRVGDDKECLKLVF
                     IDRADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
                     ASKTYLLIGEM"
     gene            46451..47691
                     /locus_tag="RJ239_000265"
                     /pseudo
     CDS             46451..47691
                     /locus_tag="RJ239_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344730.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
     gene            47701..>48039
                     /locus_tag="RJ239_000266"
     CDS             47701..>48039
                     /locus_tag="RJ239_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7330423.1"
                     /translation="MTLLEKNIQALLSGVNEPLGNKLLNFIQNKTCSRFNIDENLNIF
                     DKTHNVFMYENLEEEINFFYQSILEKTPRYPFICIYGIGNALLIKNLAKHYKHLFVFE
                     SEIELFILALS"
BASE COUNT        16855 a         6709 c         7828 g        16647 t
ORIGIN      
        1 aatatatttt aaaaatcaca aaggagaatt tatgtcagtt ttggttattg gtgcagatga
       61 aatcactcct attagagctg ttttacatga tttaggtgct aaaaaaatag aacactggga
      121 tgcacgtaat gaaaatagag ttaatcgcaa gccgattcct tgtgatacag aatgtatagt
      181 aatgttaaca agctttttaa atcataatac tatgaaaaaa atcaaaaatg aagctaaaaa
      241 gcgtaaaatt ccattagttt gtgcaaaaag aagtgtaagt tgtgtgtatt gtgaatattg
      301 taaaattttt aatcttaata aagaattttc ttgctataaa ggttaaagat gttatttgga
      361 tttgatgata agcaagaatt tataccgcaa atttatcgct atttaaacaa tcaagagctt
      421 atgttgactt ttttaactca atataatgcg agcgttgata gtgctctaaa aattcctctt
      481 ttatatgcaa aaaataccaa gagtttaaaa atgatatttg gaaatttttt gcataatata
      541 atgcatgttt catttggtaa gattcaaaat ataaatatca agcttaatac atacgctttt
      601 tactttcaaa aaagaaaaag cttgattttt aatactaaaa tatctaagaa tgtcgatctt
      661 ttaagacttt taagaattta tctttatggc atttgttttg atgcgcaaat tttatttagc
      721 tcctatgttt atgataaggt ttcttttcaa aataatggaa aaaatataga tcaagatggt
      781 gatcttatta taatagataa gaaatttgca attttgccac tttgcaaaga gattaataca
      841 cataatttag aaattgaaaa tgaaatttat gaattattga atttaataaa agaaaataat
      901 tttgaaaaat tttatattgt ttgtccgcgt aacaaaaatt tcacacattt tattgaaata
      961 aaacattttt tgtgtgattt aaacaaaact atgttaaaat tagttccgta taaaatatca
     1021 aatcaaatta taaggagaaa ataatgtcag tagcagtaat ctatggtagt gctatgggaa
     1081 atacagaagg agcggctaat acaattgctt caaaacttgg aattagtgat gtttttaata
     1141 tctcagatat tgatgcagct aaaatgaatt cttacgataa attaatttgt ggaacttcaa
     1201 cttggggaag tggtgattta caagatgatt gggatggttt tgatttttca gggcttagtc
     1261 ttggtggaaa aactgtagct gtatttggta tgggtgatag tgaaagttat tctgacactt
     1321 tttgtggcgg catgggtaaa ttagctcaaa atttaaaaga tgcaggtgca aatttggtag
     1381 gagaagtttc aactgatggt tatacatttg aagcaagcga tgcggttgta gatggtaaat
     1441 ttgttggact tgctcttgac aatgataatc aagaagatca aactgaatca agaattgatg
     1501 cttgggtaga acaaatcaaa ccttattttg cttaataatt cttaaaatca agagttttta
     1561 tactcttgat tgtcttttct taaaaataaa aaaaactcac tatttgattt ataattttat
     1621 tttctaaaga taattgacag cgttctttat ttccaagata agctgttctt gcaagaagac
     1681 ttgttttttg agaattgtga tttttagagt tgatttgtaa attaacttgc atagtatagt
     1741 agttttctac catccattct ccatcgcttt ccaaaggatc aaaatcataa aaaaatcttg
     1801 ctgaagttgt gattttttga gcataagaat gctttttcat atctacaaga ttgattaaaa
     1861 tttcataatc tgcattctct tttacttctt ttaagcctaa atttttaagt tttaaagcca
     1921 aatctctatc tagagtagtt tgaagttgac tgggattttg aaaggaaatt ttaaaacttt
     1981 gttgtttttg tgatctgata aaaatgcctt cattgcttgt ttgaataaag ctttgtgtga
     2041 aagttgcatt ggtgcaagca ctcataaaga gtgctataaa aaagcttaaa attaaagcaa
     2101 atttagacat taggtttatt taataatagt tggagtagcg ctaagaccta atgagcgata
     2161 tttttcatat aaggaaaaaa cttcttttaa ttctgcatca cttacttttg gataattttt
     2221 gatatttgca tcatagtatt tgtttaaaat tgcgattttt tctttatcat tttttgcttt
     2281 ttttgcttcc ttgtagatta gagcggattt ttcaaaagca gattttccat gtactggagt
     2341 taaaatataa ttaacttgat agtttttaag ttcatcatca atttgagcta aatgttctct
     2401 acaataaggg cattcaggat ctgaaaaaac ataaattgca ggtttatttt tatctcccaa
     2461 agctattacc atggtttctt tttgtgctac agctttagca ttttttgtaa aattttctct
     2521 tgcttcttga aattttttca tttcatattc ttgagcataa gaaattcccg ttttcaagtc
     2581 gataagatca ggggtaataa gactatcttt tgtaaaaaga atgttttctt gtttttgtcc
     2641 atttaattca acgcttacaa taacactttc aaaacccgta ttaccaacct tttgacgatt
     2701 tgatacacta acggtagcat ttggaaattg tgctttaatg ctttttgaat aaaaatcact
     2761 aatttctgaa ttacttgcag caaacaaaga tgctgaacag acaagaatta aacttaattt
     2821 tttcatagtt tataaatcct ttaaataaat tatgtttaat tctataatga ttttctaaat
     2881 gtttgttaaa aatctttttt cagcttcttt acttacttga ggaaatttgt ctaagtattc
     2941 taaataagca atagcatatt ttcttgaaag attaaaatat tctttcatac tttgcacatc
     3001 aagactttga ttttttaata aatttaaaca ttcttgcata agtttttcaa gagcttgttt
     3061 ttctataaaa agattgtgtg aaagtcttac aaccaagcct ttttgggtaa gttttttgag
     3121 tatattatct ccgctttttc tatcaagttc taaaaaatca taaagattat aaggagcttc
     3181 gggtttaata ccttgttttt ttaaaatttc atacatttgg ttattgtttt tttcttgaag
     3241 tttttcaaaa tctatacctt ttttaaaata aattccattt tgaaaatcca ataaatttga
     3301 catttcttta agcccaagtt cgcaaaaatt ttcacttgcc caagtaatcc ttaaagctaa
     3361 agaatgtgct gaaagcatgg cataaggatt tttttcaagt atgaatttga tgaaattttt
     3421 aatttcttct aggctttgta aatgatatac attaagattt ttttcatcaa caaatacttg
     3481 atttaattct tttgctaatt tcaatgcttt ttgatgagag agtttaaatc tctgatagct
     3541 tgaaagcaaa ccaaagccgt atttatgtgc gtcttttaag aaagaaaaag ctgctttaaa
     3601 atctttattt ttcaaaaaca ttaaaaattt atttttttgt tcttttttta aaggttcgct
     3661 taaaggattt aaaaccttac caccgcctat aacacgatta ttttgtaata aaataaaagc
     3721 ctcatcaaaa cttaaaaata catttttatc aaaactaaaa tgcacaaaaa attcatcatt
     3781 ttctagtttt tttaatatat ttattttgca ttctatttgt cttgaaccta cacaaaaaat
     3841 cattttgcta ttttgtaaat tttttgcttt aactaaagca tcacattctt taaaggcttt
     3901 aaaataacct tttttactta gcaaataacc ttttttcaac tctttataat cacaatttaa
     3961 acttaaagcc acacggttac aagctttgat ttgctctaaa ttagtatcgt ggttttgtat
     4021 atttttaaca atgagttctt tttgagtgtc taaacagatg attttttcat ttaaagtgat
     4081 gcttccttca ttaagactgc ctgtaacgac agttcctatg ccttttagag aaaaaactct
     4141 atcgatataa taatgaaaaa tcagttcttc atcgttttct ttgttttcta tggtataaag
     4201 ataatttttt aattcttcta tgccttgatt attttttata ctggtgtgaa atacttttaa
     4261 aatgggataa tctaaatttt ttaactcttc taaaatttct acactttttt gctctatatt
     4321 ttcacaaaga tcacatttgc taagcactaa aatgatattt ttaatatcaa gaatttttaa
     4381 aatttctaaa tgttctaaac tttgttcttt taaaccttcg ttaatatcta cgacaaataa
     4441 acaaacacta aagccaaaag ctccacttac catagtttta accaaatctt tatgtcctgg
     4501 aacatcgata aaagaaatgt ttttatcttt taatttaaga tttgaaaaac ttaaattaat
     4561 ggtgatttgt ctttcttgtt cttcttttaa actatcgcct tcaaaaccat ttaaagcttt
     4621 aatgagtgaa gtttttccat gatcaatatg tcctgcggtt cctataataa cagatttcat
     4681 aagttttcca tttgattgat tgtaagaata agtttttgaa gttcattttc tcgtatagtt
     4741 ctaaaatcaa gaacaaattc atcattttca atgcgtccta tgatattttc ttttctaaat
     4801 cgagtttgta gttttaaagc atctccttga aaagttagta tataagtatc taaactttta
     4861 tcaggcatag aacctcctcc tactaaactt ttgctttttt taagctgggt ttgaaatttt
     4921 aattcttttt gcactcttaa agcttttttc tctataaagg ataagtcatc atttaaaagt
     4981 tttaaggtaa taattttttc ataatctttt tgtaaataag cttttaagct ttcgtttaaa
     5041 aaagataggg ttaatttatc cactcttagc attcttaaaa gttgattttg tttaagtttt
     5101 tctatgagtt ctttttttcc aagtataatg cccgcttgta cgctgccaaa aagtttatct
     5161 ccgctaaaac ttaaaatatc acattcttgc acgagttttc tgattttagg ttcattctta
     5221 atcagctttt catttaaatt ttcacaccag ccagaaccta gatcataata actcaaaagc
     5281 tctttttctt ttgctagttc atgtagatct tttatattta cttcactgtg aaaacccata
     5341 agagcgaaat tagacttgtg ggtttttaaa attagagcgg tattttcatt gatagcttgt
     5401 tcatagtctt ttaagtgtgt tttattacta gttccaactt cgcaaagctt tacacctgca
     5461 gcttttatca cttcaggcac acgaaaactt ccgccaattt ctacaagttc tcctcttgag
     5521 cttatgactt ctttatcata acaaagagaa ttaagcacta aaaaaactgc cgcagcgttg
     5581 ttattgacca ctaaagcatc ttcacattca aaaagcattt taagtttttc tagtaccaaa
     5641 gcatagcgag agcctctttt tccattttct aaatcaaact ctacattaga ataattacaa
     5701 atgatatctt tacacgcttc ataaagttct tcatggatta cacttctacc aaggtttgtg
     5761 tgtataacca ctccgcttgc attaatcaca ctttgtaaat ctttgcggta aaaagttttg
     5821 atttcttttt tgatttctaa aagtagttta tctttagaaa tttcatcttg gaaaaaattt
     5881 tcttttagtt ttgcgacaac ttttttacaa aaaaatgctt tgatataaaa aggataggat
     5941 tttaaactct catcttcaat aagagtgtta atttgtggaa aagttctaaa tttgttcatc
     6001 ttaagcctta agaaaatatt tggttatttt aacatagaat ttataaaatg atgttttaaa
     6061 gagattaagg aagacaatgc aagattttgt ttatataaaa aatgatgttt taatcccttt
     6121 gcctgatgct attgaaattt tagatcaggc aaatgataaa gaagcattaa tttgcaatga
     6181 taaaaatcaa aaagcacaaa tttatgcccc tgagattaat ttttatctta aaaattctca
     6241 agatgaaatt ttagagcaaa gtaaaaatgt tttaacgctt tatgaagcaa gagctagcgt
     6301 ttatgatttg gggcttgatt tagaacaaag caaagaagtg caaaatcgtt tgattgtcgc
     6361 agatggtgac gctcaaactg tagagttttt aaaagaacat gaatttaagg ttattgcttt
     6421 aagcagtgca gaaattttag ctgtttttgg aagtgtaggg gagctttgtg ctgtggttaa
     6481 aaatcaaggc gaagaagtgg aaatagattt tgatttttta ctttttaaag ctgaggattt
     6541 aagcgttgtg cgtaaagatt ttacaagaca aagtggatgt tataatcttt taaattttga
     6601 aaatcttgaa gtattgtttg agtttttgca aagcaaaagt ccaaaatatc attataaaac
     6661 ttatattagc tataatgcta gtgtgtgtca ataccacgaa agacgcagtg agcattgtgc
     6721 aaaatgtgct gaaatttgtc ctactgtggc gattttaaaa gatgatgaaa acaaacattt
     6781 ggaattttct caagtggatt gtttgggttg tggaggatgt attagcgtgt gtcctagcgg
     6841 atcgcttgat tatgctccta tgccaagaga aagtttcttt accctttgtg agttttataa
     6901 agataaaaaa attttaatca ttcctaaaaa aatgtcttta gaaaatttaa atcttgcttt
     6961 accaaaagat gttttaccct ttatgataga gggtgaaaaa tggctttctt ctatgcattt
     7021 tttaacgctt ttgcaaaata gtggagcaaa tttggttttt tatacggatt ttgtatctcg
     7081 tggtagcaac gaggctattg tacttttaaa tacttttttt gagagaaaat ttcaaaaaaa
     7141 agctattttt gttgctaaag atgaaaaaga attgcaaaat gttttaaaag agcaagaatt
     7201 catacaagat ttaaaatatg attttcataa taacacctta actacaagag aaaattttgc
     7261 caaaagaatg caggaaatga taaaaaatga agattttggc agtatggaaa gtggcgaatg
     7321 gttgcgttat ggtaaggtag aaatcaatcc taacacctgt acgctttgtc tttcttgtgt
     7381 gggtgcctgt aatgtaggag ctttaatcgc tgataaacaa gaaaatgctt tgaaatttaa
     7441 tgcttctctt tgtacgactt gtgggtattg tgagttaagt tgtgctgaaa aagatacttt
     7501 aaaattattt cgtagtggaa tggagtttag agcttcttat tttgaatatc aaaccatggc
     7561 aaaagatgag ctttttgcct gtatagaatg tggtaaagaa tttgcgacca aaaaagccgt
     7621 agaaaaaata gccaatttaa tgaaacctaa atttggtaat gatgagaata aaatcaaaac
     7681 actttattgc tgtgcagatt gcaaggcaaa agtgatgata aaagcaatga ttaattaaga
     7741 tcaagaagct ttttcatcca cagcatagct ttagatatga cacttccatg agtttcattt
     7801 ttaaaaagtt taaaatgagt tttacaatta gtttctttgg atattttttc gctaagtttt
     7861 tgagcattga gcttagctac acctttgata atacttgaat ttgtttccaa tgaacctaat
     7921 ccgatgtaaa ttttagggca agtttgtaat tttatgatat taggtaaaaa ctcactatta
     7981 tcccaccata aagaaggtga aataataaaa taatgactaa aaatcttact atcataaaga
     8041 agtgtatcaa tggcaaaaag tcctccaaaa gaatgtccaa agagaatttg atggctaaaa
     8101 tcaataggat acattttgtt gatataaggg atgagttggg ttattaagaa atttctaaat
     8161 tctttactac ctccaccttg tttatttaaa tttgttgtag gcgtataatc tttagtgcgt
     8221 ttttgtgtat caaaagctaa attattatca taacctattc caataattaa aagattttct
     8281 ttgacaggag tgttgaaaag atttaaaaaa agaggaaaaa aggcatttcc atcgagtaaa
     8341 taaatgattt tatatttata atttgagttt tcattcttgt ttttagctat aaaaatttta
     8401 tatattgtgc cattataatt aaatttgaca ttttctaaaa taaagttttg ttttgcttgt
     8461 tttgagagct tgggtatctc tagacttggt tttgcaaaag ctagaaaaaa agaacagaat
     8521 aaaaataata tttttttcat aatttgcctt ctaattcttc tttacttgta agtttgctat
     8581 caaatttaac aacaagattt ttagagtttt tataaatatc tacaacccct aaattttcac
     8641 caaaagtact gaaatttaaa ggcgtttcta aaggtagata aaggttttta aaatcagctg
     8701 gattttttaa gaaaaataat gccacaagcc aaattagagc taaaattact aaaataatag
     8761 ctaaaagatt taaggtatct agatgtaaaa atatccctcc gataatacca cctataaaac
     8821 ttccaccata tccaaaagca ttaaataacc ctaatgctgc acctttttca tgaactttac
     8881 aaaattttga tgcacaactt tgcataatag gttcgtgtaa attaaaacct ataaaaaaaa
     8941 tcacaactgc tatgataaaa aaatcaatag aattactaaa agcaaaaaaa agataagaaa
     9001 gtatgaaaaa aacaattcct aagagtaaaa tttgtttagc taaacctttt ttttcgccta
     9061 aacttccagc aaagcccata gcgataaaac ctgctaccat agaagcgcta taaacaatcc
     9121 aaagtttatc agaagcaaag cctaaatgtt ttactagaat aataggaata cttaaaaatg
     9181 ctatactcat aagcattttt tgcatgaaat tagtaagatt cataagggct aaattttttt
     9241 gtttaataag atgaaaaaaa ggagtttttt cattttcatg agtgatttta ttttctttag
     9301 gtacaacggt ataaagtaaa attatacata aaagagacaa agccgcacta agatcaaaaa
     9361 ggctagataa accccatttt gcactcatta aaggagaaat taccatagaa gctgcaaaac
     9421 taagtcctat aaaagaaccc attaccgcca tggctttacc acgattttct tctgtgataa
     9481 aatcacttat cattgccgta gctactgctc caatagctcc tgcaccttgg agcattctcc
     9541 ctaaaagcat ggtgtaaata ttttctgcaa aagagcagat taaagagcct attataaaaa
     9601 taatcagtcc aatgagcatg gtttttttac gaccaatttt atcacttaaa atcccaaaag
     9661 gcatttgtaa aatcatttgg gttaaggcgt aaacaccaac taaaagtccc actaaaaatt
     9721 cattagcacc ttcaagtttt aaagcataaa ggcttaaaac tggcaaaact ataaaaagcc
     9781 caaaaaatct tgttccaact atgaaagata agggtaagac attatttagc attatcaatt
     9841 tcctattaaa tttgaaattt aaattaggat aattttacta tgaaatggat taagcattga
     9901 ttaacatcgt tttaccattt tgtatttaaa agctacgcac aaggataaat tttataaaat
     9961 catatttttg tttttgatat tattttggag cttttgttat gaagattatc ctagctacga
    10021 gcaataaaca taaagtttta gaacttaaag aaattttaaa agattttgaa atttatgctt
    10081 ttgatgaagt tttaatgcct tttgagattg aagaaaatgg aaaaactttt aaagaaaacg
    10141 ccttgattaa agcaagagcg gtttttaatg ctttggatga aaagcaaaaa aaagatttta
    10201 tcgctttaag tgatgatagt ggcatttgtg tagatgtttt agaaggaaat ccaggaattt
    10261 attctgctcg atttagcggt aagggcgatg ataaaagtaa ccgtgataaa cttgtcaatg
    10321 aaatgataaa aaaaggtttt aaacaaagta aggcatatta tgttgctgct attgctatgg
    10381 taggtttgat gggggaattt agtacgcatg gaaccatgca tggaaaagta atagatacag
    10441 aaaaaggtga aaatggtttt ggttatgata gcctttttat tccaaagggt tttgataaaa
    10501 ccttagccca gcttagcgtg gatgagaaga ataatatctc tcatcgtttt aaagctttag
    10561 agcttgcaaa aatcatttta aagattttaa ataaaggata aaaatgaaaa attttttaaa
    10621 atatatagct attattgttt taatatatgc tctttatgtt ggtttggaaa cttggttttc
    10681 ttagaataaa tagtgattaa aaagcttggt aataagaaca aacttccact taaaagcaaa
    10741 atcattacaa aaacggttaa aattccaaaa taaattgttg gaatgaaatt actactcatc
    10801 ataacactaa aacctaaaac tatgctaatg gtagtataat aaagtgccga acctatacta
    10861 aggtgagaaa tcataatggc ttcttctagg cttttgtttt taatttcttc tctaaaacga
    10921 taaatataat gtatagcatc atcaacgcct atgcctatag caatagcagc tatagtaata
    10981 ctcatcatat ccaaaggaat acctaaaagc cccataagag caaaaaccac acttaaagga
    11041 ataacattta ccaatatagc cgcaactgaa aattttaaat ctctaaaaac aatgataaaa
    11101 agtataaaaa tagctaaaat tacaaatata agagtatcaa attgcgatga aaaaagactt
    11161 tggagcatat tattataaag caccattatg cctgtgattt gaacttctac tccatcattt
    11221 tttacaagct cgttgagctg ttttttaaga tctattaaaa actcattacg tcttaaattc
    11281 ggatcagaat caacaatacg catgctaaat cttaactcgt tattttctat acttacaaaa
    11341 ggtgaaagca agtcttgttt aaatttggca ggcaaatttt catttaaaaa cgcaagggca
    11401 aaatcatcca actcttttcc atcgttaata tttttcccta gggttaaaag actattaaga
    11461 cttaaaaccg aacctacaaa ttctttgttt tctaaaaatt catgaacttt ttttgcaatg
    11521 cgtgtttttt tagagtcaaa ccaataagtt tcttgtgtgg ctaaattttc aaattcactt
    11581 tcaaaactat caagagtatc gcttgcattt tgatcgtttt tattatttgg aaaacgaatg
    11641 atcacttcta aaggtaaggt tccacctaga tttttatcaa taaccaaaag tccttttttg
    11701 atttcactac catctttgaa ataattgaca aaagaatttt caactctgag ttttgaaatg
    11761 cctattaaag ctaagattat agcaagaact gaaatttcat aaatcatgcg acgcttttta
    11821 ggatcaagag cggttttggc gcaaaaggct aaaagattaa atttaaactc ttttttatga
    11881 taattttttg gttttaaaag aactaagata cttgctaaaa acaaataact aaagataaga
    11941 gctaaaccta tacctatact catcataatg ccaagtttta tgataggttc gatatttgat
    12001 aggattaaag aaaaaaatcc tatcatcgtt gtaacaatgg cataaaggct aggatttgct
    12061 ttcgctagta aggtttcaag cactatgcgc tcaactttag ctttgggatg attttgggtg
    12121 ctttcgataa aatgcgtgat caaatgaaca actacactta aggtgataat taaaaccaaa
    12181 gcaacgtaat ttgatgaaat aaccgtgatt tgaaaattta aaagcgcaaa aactccacta
    12241 gccgcactta agcttataaa acaaataaaa agaggtaaaa aaacaaagcg ccatgagcgg
    12301 aaaaaataat aaagtgcaag tcctagtaaa aatacaagag aaacaccata aagcacaaga
    12361 tcagatttta tataagctat catatcatca gcgatcatgc ttacgccacc aaggtagagc
    12421 gtatctttat ttttttcata atttcgaact atgcttttaa tagtatctag actttgtttc
    12481 gtgataactt tttgcttgtc ttgatgttct tttatggcaa gacgaatttg atctttttct
    12541 ttttcatcgg tagcaagatc gcgtttttct ataagattat tataaactgt atcaggcttt
    12601 aagtaaataa taagccctgt tacttttcca tcttttgaga tgatattatt tttataaaag
    12661 ggactattta aaatttcatt ttgggctttt gtgcggttta tatcttggct ttctatattt
    12721 gggatatttt ttaaaagttc ttttaaatcc gtattttgcg aactttgaag caaaggggca
    12781 ttgatgatac taaaaacgcg ttctactaaa ggggcttttt ctaattcttc atgaagtttt
    12841 tttaatttgg ctaaattttc atttgaaaaa ggtttttcat catagggttt gaaggctaaa
    12901 agtaaaaaat tatcactttt ataatgtttt gaaatttctc taaaagtttt taaatctgca
    12961 tcatcttcta aaagtaaact ttcagcactt gcatctacgc taagcttaaa agcaaaaaag
    13021 cttaaaaaca ggcatataaa caacgttcca aaaaaagtac tttttggacg agaaataaaa
    13081 aactttaaaa gctttgcaaa cattattcta tgacaatact ttcaagtttt tgaagtaggg
    13141 catcaaagcc ttggttggct aaaatatctc caaattgtga tctataagtt tgtactatac
    13201 tcacacctaa aacatctaca tcataaataa gccagttgtt attatcattg taaaatttga
    13261 aaatgatatt tttttcttcc ccatctacta ccatagaagt ggttaaaaaa tagcgttttt
    13321 cattttttaa ctcaccattt ttgaccttta aaacctgatc tttataaaga ctgagtttat
    13381 cggtaaaact ttttttaaga cttgtttcaa aggctgtggt aaatttttct tgttcttttg
    13441 gggttaattt agaataattt ttcgaaagac tgagtttcgc catgagttta taatctatta
    13501 tgctatcaaa aagtttaaaa attccattag cagcttgttt tttgtcttct ttgttatctt
    13561 gtaaaagttt taagcttgca tcaatgtttt tttgcatagt gctagaaatt tcatctagtt
    13621 gtaaggcaaa agcattaaaa aataaagtca agattaaaaa tatttttttc attaatttcc
    13681 tttatttgct aagttcattg cgtctttgct cgtaagcatc acgcaagaat ggatataaat
    13741 taggcgtgtt gtgataaatt tcatcaattt catcaagcct aaaactaagt tcattaccaa
    13801 atccataagc acttatagct atacttgccc aagtaggatc aatgtaagcg gtaaaacttg
    13861 cataccaagt tgcaggtaaa gtaagagtgt ctctaagatt gctaggacca agtataggta
    13921 agacaatatg aaaaccgctt cctacacccc agtgagccaa aacggttcct aagtccgcgg
    13981 gatgtttttt aagacccatt tttgatgcca catccataag tccaccaaaa cccatgatgg
    14041 tattggcggt aaatctttta aattcttctc cagcttcttc aaatttaaac tgcaaaacat
    14101 tgcttacaaa acgcaaagga gcaagtaaat tatcaaagaa atttcttgcc cctaatctta
    14161 taaattcagg agtgatagcg ttatagccct taagaacggg acgcaaacca taatcataca
    14221 aagccacatt aaagcttgtc atagctttgt tatatcctga aagtggatcg tttacttgat
    14281 agttttggta ttcttgttca aaatcatcta aattttgttc tttagcaaaa gcaaaaatag
    14341 taaaaaaaat taaaataaaa gatataaatt ttattctcaa gcaaaaactc ctaaaaattt
    14401 taaaagtaaa attatagcaa atttttaatc aagatttata tcccagtaaa aatccaccca
    14461 ttcagtagct tcttttactt taaaatcagg ctctaaaaga gcggtttttt tgtaaaaaat
    14521 ggttgtaatt ttaagttcta tatgaggaaa tttttcaagc aaaacttttt ttatttctgc
    14581 taaactttct ccactatcta ctatatcatc aatgagtaga atttttttgt gcttgcttaa
    14641 atcgggaatg ttaaaaattt caatagtatc aagttttttc gtattatcgt aatgaattga
    14701 gtttaaagca aaaagttgac gcgtttttaa agccactgct aaagagtgtc ctaaactcat
    14761 cccccctctt gctatagcta aaagtgcatc agggttaaaa tcttctttaa tttctttagc
    14821 aagaattttt acatcttctt taaattcttc ataggagtaa aatatcatta tatatcctta
    14881 tttattgtag tgccataagt aaaaaattac ccaaagataa taaacttaaa actataatgc
    14941 caagattgat tttatcccat tcgcgtttaa aaattcttac aagtaaataa gaaagaaaac
    15001 caaaagcaaa acctgtggtg atggagtaag taaaaggcat catgataata gtaaaaaagc
    15061 ttgctacagc tatagcacta tctttaaaat ctatattttt aacttccata aacattaaaa
    15121 ttccaaccat tacaagtacg gggtatattg cgtttgcagg aatggcttta aaaagtggca
    15181 gtaaaaaaag tgtaaaagca aaacaaatag ctacaactaa agctgtaagc ccagttcttc
    15241 ctccgctttc aacccctgta gtgctttcaa caaaggctgt aactgtagaa gtgcctgtca
    15301 tagctcctaa ggctgatcct gttgcatctg ccattaaggt tttgcttagt tttttttctc
    15361 catttttggg atcatcaaaa atctttcctc tttcacccac acctgtgata gttcctatgc
    15421 tatcaaaaag ttgagtgata aaaaaagtaa gaattatagg tatcatagta atatttaagg
    15481 cgcttttgat atcaagttgt aaaaagatgg ctcctaaacc attttccatg ctaaaatttg
    15541 gccaagaaaa gatttgcaca ggaaaacttg cattgtctaa atggaaaatc caagcaataa
    15601 tagagcttgc taataccccc aaaataaaag ctccgcgaag ttttatagcc caaaaaaaga
    15661 tgattaaagc tagagtgaaa attccaaaaa gcacatgagg gcttttgaaa tttcctatgc
    15721 tgactaaggt atctttatta tgcattatca cacccatttg acttaagcct aaaaatgcaa
    15781 taaaacaacc tatgcccgca caaattgcaa ggcgtaaatc ttttgggata ttgcggatta
    15841 cccaaaggcg aaaatgcgta aaagaaagta tgagaaaaat aatacttgaa ataaaaacag
    15901 ctcctaaggc gctttgccaa gctatgtttt gacctaaaca aaccgcaaag gtaaaataag
    15961 catttaaacc cattcctaca ctcatagcta caggagtatt ggcaaaaaaa gcattaaaag
    16021 cacttgcaac tatggtaatt aaagctgttg cggtgattaa agcttctata ggcattcctg
    16081 tatttcctac tatgctagaa tttacgggga taatgtaaac catagctaaa aaagtagtaa
    16141 gtcctgctat aacttcggtt ttaaaactcg tattgttttc tttgagttta aaaaagctca
    16201 ttttttctcc ttagtaggtt tttagctcgt tgtataaact atcgcgttct acaggaataa
    16261 gatttgaagt ttttatcata tcgataaaag tttttaaact tgtgcctttg gcggactttg
    16321 caccacctgc actttgtata ctttcttttt ctatagtgcc gtctaaatca ttagctccaa
    16381 attcttgtgc taccatggct aaatttaaag tcattgttgc ccagtaagct ttgatatttt
    16441 tgatattatc aagcactaaa cgagaaatgg caatggtttt taaaatttct tcactatcca
    16501 tgattttatc agtttgtata aagcttttat ccctttgcca aactaaaggg ataaaagcat
    16561 tgaatccacc ggtttgatct tgaagatcac gcagtcttaa catatgatcg atcctgtgat
    16621 gtctttcttc tatatgtcca aaaagcatgg tagcattact ttgcttgctt ttttcatgcc
    16681 aaagtttatg aattttaagc caattttcac tgctaacttt tccatgacaa attttcttac
    16741 gcacttcttc atcaaaaatt tcagctccac cacctggcat ggaatcaacg ccgtattcaa
    16801 gcattttttc tatcacttct tcataactca ttttaaaacg acgatgtaaa aaatcaattt
    16861 cagcagcagt catagctttt acatgaagat taggatattt ttcttttatc attttaaaaa
    16921 tttctaaata ccattgccaa gttgtatctt tgttgtgagc tgaaacgata tgcacttctt
    16981 tggtttctcg ttttacggtt tcatcgacga ttttcatgat ttcttcatga gtcatcaaat
    17041 aaggattagg attttttcgg tgcgctgaaa aggcgcaaaa tttacaggta tctgcacaga
    17101 tattagttgg gttgatatgg cgattgatat taaaatagac tttttttcca tgaagtttag
    17161 tgcgtttttt gtgagcgtat ttgcctaagg taaaaagatc tagatcccaa agtgcattgg
    17221 cttcttcttg gtttaatctt tcttcatttt ctagtttggt gattaaattt ttcattttaa
    17281 ttttactctt ttgctgtttt taaataaagc attataattt ttgcttactg aaaaagagtt
    17341 tatagaaaaa gccaaaataa aagatatttt tgttaagatt attattaaaa tattaaaatt
    17401 ttaaagagag tagaaatttt gttaaataaa gaattagaaa tttttaaaaa aaatcttagt
    17461 tcctataccc aaagttgtag aaaatttttt cttaagcaag gggcgtttag cttatatcat
    17521 tctaaaaata tggataattt cataaaaaaa gcttatgata tagttcttaa agattatttt
    17581 gatgattttt cacctccaag tgataatatc cctttttgtg ttttagcaag caaagcatat
    17641 gcaaataata gtctttgttt taatgaaagt atttctttga tttttgttta taaagatatt
    17701 aaggcttttc atttaaaacc tatgattaag gcttttatcg aaattttaaa tgatgcgcat
    17761 ttgcaaattg attcggttat cttagaattt aatggacttt ataatgctag caatgagctt
    17821 aagacttcta taatacaaac tcgtttcata tgtggttcta ggattttatt taaagggatt
    17881 aagataaaat ttgagagtat tataaaagaa aataaaaatg attttgccaa gcttttgcta
    17941 gaaaatttta aagaatttga cattccattt ataaagcaag aatttaatat cttaaaagat
    18001 tttggcggat taaatcattt aagatccttg gagagtttgc ttgttctttt taagacttct
    18061 ccaaaaaatt atgctttaaa ttttatagat gaaaaaaaat taagcgagtt gcgtttagct
    18121 ggagattttt tactttcttt aaaatcagcg atgaatttat taagtgctaa agatgaggat
    18181 gaatttttac ttattaatgt tcatgatttg agtgaattaa tgtataaaaa agctaaaaaa
    18241 cattttggag caaatgagtt gttggttcaa aaggctttgc aaagtatgca tactataggt
    18301 ttttatacac actttttagc aaagcaaatt caagatggat taaatcatac tcttaaacaa
    18361 gaatataaat ttaaaactct tgtggaagtt ttagaatact tattaaaact tgaagataaa
    18421 catgttattt tcgatcttaa cttggttttt gccctaggaa gattgaaata cggtaaaaaa
    18481 gatatagaaa aagctttaat actttttgag aaaatttttt ataaaaggca tagtttttgt
    18541 gttttaaaac ttttgcttga tagtggaatt ttaaaagatt tatgtaagcc tttttggaca
    18601 gttcgttttt taagcgatga agaaggaaat tatagttttg atgagcaagt ttttcttatg
    18661 ttaagtgaat ttgaaaaata cgaagatgag cttgagatac tccaaaaact taaaaccgat
    18721 gaaaaaatga ttttaaagct tgtgatactt ttaagcgcta tagaaagtga aaatgaaatt
    18781 tctttagcag gcatatatag agcgtattgc tccaaatttg atttaaagaa tgaaatttta
    18841 gaatggggtc ttaagatatt taaaaacaat aatgccttaa aagatcttgt agaaaaagaa
    18901 gatatataca atcctattgt tgtaagtagc ttggtttcta agctagaaaa tttagaaaat
    18961 ttagagcttt tatacacttt aacttggcta aaggctaagg ctttaaatta taatgctttt
    19021 tattttagag ttcttgataa acttttagaa aatgcaaaac aaggttttga agatgaaaat
    19081 ctacttgaag aaagcgcaag aagagtaaaa aaagaattaa cacttaaaag aagtaagatt
    19141 tttttagagc aagatgaaat tttgcaagat aaaatcatac atatcaaatc aaatcttttt
    19201 attataaaaa atacttttga agatattgtt atgatttcta aattagccaa agaaaatgat
    19261 tttaaatttt ggtttagcaa tgaaacaaat cttagtttgc aaattgttgc accacttcat
    19321 tttaatattg ccattatttt aagttcttta acaaatttaa atcttatttt catgaatttt
    19381 tttgaacttt ttgatgataa aatttattta agatttgaat atgataatat tatcagcgat
    19441 gagcaaaaac taaaactttg cgagctttta aattcaaatc tttctggttt taatttgaaa
    19501 aaaattaaaa agccaatcat taaaaaagat gagttaaaat tagacttaaa ttattctaaa
    19561 atgtatgcca aattaggtct taatactaaa gatcagcagg gtttaatggc gtatttgatg
    19621 aatgttttta atgaacttga acttgtttta tgtgcagcaa aaattcaaac cataagacaa
    19681 aggacgcgta atatttttat ttttcaaaag aatgaaaaat tagaacatag cgagcaaaag
    19741 ttagttaatt tattaataag tgagtaaaaa aatgtgtgga atcgtaggct atataggaaa
    19801 taatgaaaaa aaacaaatta tactaaatgg acttaaagaa ttagaatatc gtggctatga
    19861 tagtgcgggt atggcagtga tgcaagaagg agagcttagt ttttttaaag ctgtaggaaa
    19921 acttgaaaat ttggcgaata aatgcacgga ttttgaaagt caaggttatg gttttgctat
    19981 aggtcataca agatgggcaa ctcatggtaa gcctactgaa atcaacgcac atcctcattt
    20041 aggacagtat tcttgtgtga ttcacaatgg tattatagaa aattataaag aaatcaaaga
    20101 taaacttgaa aaagaaggcg tgagtttttt aagtcaaacc gatacagaag ttattgtcca
    20161 gctttttgaa ttttatgcaa gaaatttggg agtttttgaa gcttggcaaa aaaccatcaa
    20221 agaacttcgc ggtgcttttg ctactttgtt ggtaacaaaa aaagatccca atcatgtgta
    20281 ttttgcaaaa aatgctgccc ctttgattat aggtaaaaat gcaaataaag aatggtattt
    20341 ttcttcaggt gatgcgcctt tgataggaag ttgtgatgag gtaatgtatc ttgaagattt
    20401 aagcttggga tacgcgagta aagatgagct tgtcgtttat gaaaatgata ttttaaaatc
    20461 actttgtttt tctaagcttt caggcgataa ggcttatgca aaaaaagacg gctttcgttt
    20521 ttttatggaa aaagaaattt atgaacaaag tcgcgtgatg agtgaagttt taatggggcg
    20581 tattcaaggc gatgaagtcg tttttgatga gctaaacaat gaagatttaa gtcaagtaga
    20641 tgaaatcacg ctttgtgctt gtggaacaag ctatcatgct gcaatggcaa gtgcttattt
    20701 gtttgaaaga attgctaaag ttaaagctaa agtagaaatt gcaagtgaat ttcgataccg
    20761 tgaagcaatt ataaaaaaag attctttatt tatcgttatt tctcaaagtg gagaaacagc
    20821 agacacttta gaggctttaa agattgcaaa agagcagggt gctaagactt ttgcaatttg
    20881 caatgtggat aattctaata tagtgcgttt agcacatcta agtcttttaa ctcgtgcggg
    20941 catagaaaaa ggagttgctt caactaaagc ttttgctact caggttttaa cactttggat
    21001 gcttgctatt tttatggcac aaaaaagaaa tttaaatgtt tctgctgaaa ttaaagcact
    21061 tttgcatact ccaaattgcg tgagtgtaaa acaggcttta catgaaaaaa ttcatcgttt
    21121 atccaagcgt tatttagatg gacatggctt tttctttata ggcagagatg tgttttatcc
    21181 tttggcttta gaaggagctt tgaaacttaa agaattatct tatcttcacg ctgagggtta
    21241 tcctgcagga gagatgaaac atggccctat tgctttggct gattctaagc tttatactat
    21301 agctttaatg ccaaagcaca tgctttatga aaaaacaaaa tcaaatgttg aagagcttat
    21361 tgctagggat tctacagtgc ttagcatttc acctttagaa tttgatttaa gtgatgattt
    21421 tataaaaacc aatgagcaag atcattatat gtgtgaattt tttgaaatga tggtcattac
    21481 tcaacttttg gcgatggaaa tttccataag acttggcaat gatgtggata tgccaagaaa
    21541 tttggctaaa agcgtaacgg tagaatagaa atgaaaaatt ttttttgttt aactttagtt
    21601 tgtaaacttt ttgctttaag cgaatttgaa cttcatcata ttgataaagt acataagcta
    21661 gggtatagcg gagatactat tataataggt gtagccgatg atgcttttaa tcaagatcat
    21721 attagtttaa aggataagat tttaaagtct acttatccta ctgatacagc tgggaaacag
    21781 cttatacctg atttgaaaaa atcaacacac ggaagtcatg tagcaggtat agctgttgga
    21841 gcaaagatag gcgatagcaa accttatgga gtggcttatg gggcaaaatt ttatggagct
    21901 ggggtgtttc caaatggctc ttacactcaa attcctgata tttataattt tttcaaagat
    21961 gtgagtatta ttaataatag ctggggtatt aatttttatc cttattttaa tcttaaggct
    22021 tcaaattctg gattagtaga ttgtactcaa actaatcaag ggacaagcta taatatctgt
    22081 aatactcctt tggaatatgt tatgaaagca gataaggttg ctaatgatat gatgaggctt
    22141 agcaaggaca agggagtatt aaatgtattt gctgctggta atgaaggaat tcttagccct
    22201 gctttgcatg cgattttacc aagttatgat gaatctttaa gagcttggtt ggctgttgga
    22261 gctttggatg caaatgagat tactttagaa tcagatggga ctttaataat taaaagtcaa
    22321 ggtttggctg attttagtaa tggttttaag ggagctacga atttttcttt agttgctgct
    22381 ggagtaaata ttaataatgt tgattcaagc actaatgata agtttacaaa aaaaagtgga
    22441 acttctatgg cagcacctat ggtaagtgga acagcggcac tggtcaagca aaatttcccc
    22501 tttttggatg gtaagcaaat tgctgatata ctattaagta cagcaaataa aaattataag
    22561 gctccaaaat ttactgttaa acaagtaacc gatggaacaa atcaacctaa atttcttatt
    22621 gtgtatattt cgcaagatcc acctgggata gaagatgaaa taaaacggga tttaaaacag
    22681 ctttacaatg gaatacaagt tcaagttaat ggacaatgga ttgattatag tgattatatt
    22741 tgggataata gagatagtgc gcagtcacaa aaacttaata cttccactat tagttctatt
    22801 aatggagtag ttagagttga gaaagaagaa ttatttggac aaggaatttt agatgcacaa
    22861 aaggcgttaa aaggactgag tattttagat gcaaacagac tcagtgatca ggatgtatta
    22921 aaatatgagc aagaacctaa tacagcttat tatactataa acactgcagg ttatgatgct
    22981 gaattttcta atgatattag tcaaagaaaa tgggatgaaa gtactcattt atcaagtgct
    23041 attaataaac ctacacattt agctaatctt aacatagggt tatctaaaga aggtgaaggt
    23101 attttgatta tcagtggtca aaatacttat gagggcgcaa ctttaatcaa acaaggagaa
    23161 ttaaagctta aaggaaaagt taaaaataat gcttatgtag aacaaaaagc aatattaagc
    23221 ggtaatggta ttgtagggca aaatttaaac aataaaggca tagttagacc tggaaatgaa
    23281 gatttgaatg atttaaccgt gcaaggaact tatactcaag aaggagttga ttctaaattg
    23341 caacttgatt ttggtaatta taaaaattct aaactgattg caaaaactta tgatattaag
    23401 agcgggaatt tagaatatat tcctttacct aaatactata tcttaaataa gccagtgaaa
    23461 attaatttgg gagatttgga aaaaagttta tcatctttta atcatgtttt gatacaaaat
    23521 acctatgctt taaattttga ttttgtttta agtgatgatt tagtgagtat taataaaacc
    23581 ttaataaaac ctaatttaaa gccaaatgct tacgaaattc ctaatacaag cttgggaaat
    23641 gctttaagac aattgcgatc tagggcagac ttgagtcaga cttatcagga attttttgct
    23701 tctttagata atggaataga tgtaaagact aaattaaata gaatagaagg ttcagggtat
    23761 ttaagcactt ttagtaatca taatcaatct aatttaatgc aaaataatat gttatttacc
    23821 cttcatcctc ttaatattaa taattttgca caaaacaata atatcttact tgctagtact
    23881 tatttaccta gaatttttag caatgaagaa tatttttggc atcttactcc aagttataaa
    23941 tactataaag ataaagattt ttcaggtcaa aaaacaggtg ctaatatctc tttaggagaa
    24001 aatttctcat caggcttttt agcttatgct ttatctcttt ctagcgctaa atttaatttt
    24061 aataatggta gtgatttgaa gagttataac atggatttat tgcttaatta taaccatgat
    24121 ttagatttta taaaaatatt aagtggatta ggtataggtg taggatttaa tactcttaat
    24181 cgttttgtag tagagcagcc aattgaaggc aaatataaaa cattgcaaac ttcagcccag
    24241 cttggtgtaa ctaaagatat tattttaggt caagatttta tttttaatcc tttaatgtat
    24301 tttacacata gtttttttta tcaagaagat tttaaagaaa ataaaagtcc ttttgctaaa
    24361 aattatgaaa gtttaaaaca tcatagcata aatgcaaatt taggttttaa tcttgctaaa
    24421 aatatagagc aagatgatta tcaagcttct ttttctactt ttgtaatttt tgaaaaaaga
    24481 atttatggaa gaactttaga aaataaggct agttttgttg attttcctat tgcttttatt
    24541 caaaaatata aattaaaaga taatatttta agtcaaggtt ttaattcaga atttttatat
    24601 aaaaacaatg tattttggca gtttatgtta atgaatagat tttctcataa tgcctatgaa
    24661 ttgcatttaa tgagttcagt aggaaaacgt ttttgaaagt atttattttt ttagcttata
    24721 ataaataaaa ttttaatcaa aggaaaaaat tatggaatac agagttgaac atgataccat
    24781 gggtgaagtt aaggttccaa atgacaaata ttggggagct caaactgaaa gaagttttga
    24841 aaatttcaaa atcggttgtg agaaaatgcc aaaggtttta atctatgctt ttgcaaatct
    24901 taaaaaatct ttagctttgg tcaataacaa acttggcaaa cttgatgatg ctaagaaaaa
    24961 tgctatagtt caagcttgcg atgagattat cgcaggtaaa tttgatgata attttccact
    25021 tgcgatttgg caaacaggtt caggcacaca aagcaatatg aatatgaatg aagttattgc
    25081 aaatcgtgcc actgaaatca tgggcgggga ttttcgcaaa gaaaagcttg tacatccaaa
    25141 tgatcatgtt aatatgagtc aaagttcaaa tgatactttt ccaacagcta tgagtatcgt
    25201 tgcggttgag caagtagaga aaaagcttat ccctgcgctt gatgagctta ttgcaacttt
    25261 tgaaaaaaaa gtaaaagaat ttgatggtat tatcaagata ggacgcacgc atttacaaga
    25321 tgctactcca cttactctag cgcaagaatt tagtggatat ctttctatgc ttttacattc
    25381 aaaagagcaa atcatcgctt ctttaccaac tttaagagaa cttgccatag gaggaaccgc
    25441 agtgggaaca gggcttaatg cacatccaga attaagccaa aaagtaagtg aagagctaac
    25501 tcaacttata ggtacaaaat ttatttcaag tccaaataaa tttcatgctt taacaagtca
    25561 tgatgcgatt aattttactc atggagctat gaaaggtttg gctgcaaatt taatgaaaat
    25621 tgcaaatgat ataagatggt tagcttcagg cccaagatgc ggtcttggtg agcttatcat
    25681 ccctgaaaat gagccaggaa gttcgattat gccaggtaag gtaaatccta cccagtgtga
    25741 agctgttact atggttgctg tacaagtgat gggaaatgat gtagctatcg gatttgcagc
    25801 aagtcaagga aattttgaac ttaatgtgtt taagcctgtg attatttata atttcttgca
    25861 aagtcttgat ttgttggctg attctatgca ttcattcaat atccattgtg ctgtaggcat
    25921 agaaccaaat cgtgcaaaaa tcgatcataa tcttcataat tctttaatgc tagttaccgc
    25981 tctaaatcca cacataggtt atgaaaacgc tgctaaagta gccaaaaatg cccataaaaa
    26041 aggtatttct ttaaaagaaa gcacaatgga gcttggtttg gttagcgaag aagatttcaa
    26101 taaatttgtt gatcctacta aaatgatagg cccaaaagcc tagaacatca aacttgcctt
    26161 ttttaaggca agttaaatta aattcttatc ttttaaaatc acatacattc ttaaagttga
    26221 tacaaaaaag gttaaaatcg caggacctaa tataataccc caaaaaccaa aggtagaaat
    26281 tcctgctatc atagccaaga aaattaaaag ttcattgatt ttagtagggg tttttacaag
    26341 ttttttgttg atccatttga tgattaaagg tttgattaaa gtatctgcta taaaagaaat
    26401 tacaattaca gaataaataa aaataacaag agctgagtta agattgtttg aggcaaattc
    26461 ataaagactt acaggcatat aaattaaagc acctcctata gcaggtatga gagaacttac
    26521 agcaaaaatt actcccatta aaattccatc ataaccataa aatattgtga ttaaaccaaa
    26581 aagcgcacct tgaaatatcg ctacaatcac catagagtaa agtacaacag ccataacatt
    26641 acccacctcg cttaaaacat catcaagttc ttttttatca ataggaatga tggatttaag
    26701 atagataaca agttctgttc catatagatt tgcaaagaaa taaaatacgc aaattaaaac
    26761 catatctata agaaatttag ctcctgattt tgtaaaactt gaagcataac ttagaatttg
    26821 tttagaaata ctatttaaat ctatagatgc taaaaattct ttgattttag gttctaaaaa
    26881 attaaagctt tcaggcaagg taaattgata atttttgaca taatcaagag tttgtgtgac
    26941 taaattaata tcaaaatttt ttaaagcttt ggcaagttct atcatagcat aaacaaaagg
    27001 tgcaaagaaa agcaaaacca tacaagttgt tgtaagaatg gaagctaaaa atttatgccc
    27061 tttagtaaga tttaaaaatt tcgcattgat atttgaggta gctaccgcca ttaaactagc
    27121 tatgataatt acaagtaaaa aacctttaaa aaggtaaagc aaaagaaata aaatgactaa
    27181 aataaagctt ataagaaaga attttccatt ttgcaaaatt tactcctcaa ataaagtttt
    27241 ttcatagttt agttttaaag cactataact ttttgcactt gctatacgcc cttttgcagt
    27301 gcgttctata tagccattag ctaataaata aggctcgatt acatcttcta tggtattttc
    27361 atcttcactt aaagccgcag caatacttgc aagcccgata ggtttttgct tagcagcggt
    27421 taaaagttca agatatctta aatccatcgc atcaaaacca agctcattaa cccctaaaga
    27481 atttaaggcc tcattagccc ttttttctgt gataatctct tcatcattaa catcggcaaa
    27541 atctctaact ctttttaaaa gccttagagc tattctaggg gttgaacgac ttcttttagc
    27601 gatctcaagt gcggcttttt cttcgcaagt tttattaagt tttaaagctg ctttttgcaa
    27661 gatgagggca agttcgctat ctttgtaaaa ttctaatcta aattgcatac caaaacgatc
    27721 acgcaaagga ttgctaagca tacctgcacg cgttgtagcc cctataagag taaattttgg
    27781 taaatcgatt tttatggttt gagcagctgg accactacct atgataatat caaggcggta
    27841 atcctccatt gcagggtaaa gcacttcttc gatagcagga cttaagcgat gaatttcatc
    27901 gataaaaagt atatcccctt cgctaagatt ggttaaaata gcggctaaat ctccgctttt
    27961 ttctatcata ggagcggcgg ttgttttgat atttgcactc atttcatagg agatgatatt
    28021 agctagtgtt gtttttccaa gtcctgcagg accactaaaa agtatatgat ctaaacattc
    28081 attgcgtttt ttggctgcag ctataaagac atttaaattt tttttaatgc tttcttgacc
    28141 tatataacca tcaaaatttg aaggacgcaa cgaagtttcg taagtttcat caaaggagta
    28201 tttttctatt tctactattc tatccatatc tttgcttata ttttggaaaa attaaaataa
    28261 gattttagct aaaatttgct agaatttaca ttaaacttta atgattatgg tttaaaaatg
    28321 ggaattttaa caaaattaga attagattat gaaattgacg atatagaaaa atttttacaa
    28381 ttttttagaa ccatgtgcga taggtttgaa cctttaatca tcaagcttgg aagcgatagt
    28441 gtgcgttata aagaagccat aaaagagctt gaaactttag cacacaatac cgcttgggca
    28501 gcaagacgct taaatcttga agaagtgact gatttttgtg tattttgtga agagatgatg
    28561 gcgcaagcaa atcgctttaa tgggcctgct agtgatgaat ttacggattg gatgcttttg
    28621 atgagtgatc agtttgaaaa atattgtcgt tcatatgaaa atgatgattc tgttttagcg
    28681 gtttttaatc ctttaattgt taatgttcca aatattattt ctaaataagg gagcgacttg
    28741 gcttcgacag gagtaagtct gcttagatgg catgtcgctt tgggcaaagc gtaaaaagcc
    28801 caaataaaat taaacgcaaa caacgttaaa ttcgctcctg cttacgctaa agctgcgtaa
    28861 gttcagttga gcctgaaatt taagtcatac tatctagctt aattttcggt catttttgat
    28921 agtgtagcct tgcgtttgac aagcgttgag gtgaaataaa gtcttagcct tgcttttgag
    28981 ttttggaaga tgagcgaagt agggtgaagt agtcatcttt gctaagcatg tagaggtctt
    29041 tgtgggatta tttttggaca ggggttcgat tcccctcgct tccaccagtt ttaaatcaat
    29101 gtttattgaa atttgaagat taataaaaat tcatagttta aagtttttaa ggtgtaaaac
    29161 cctaaaaact tttagttttc cttaaaaagt ttggaagcta agtgcgttgc acgactttga
    29221 tctgtatctt ttttaagtgt tttataaatt ttacttacat attcttctaa ggtttgttga
    29281 gaatctatga ttttttcaga agaaggaatt ttttcatact ctccattgtt tttaagctca
    29341 taagctaaaa cattatcact aagttgcaag cgtaaaaatt gagctaattt agctttactt
    29401 ctttcatcat atataggagt cataagttct aagcgacgct ctaaatttct tggcatccaa
    29461 tctgcactcg atataaaata atttggctca ctatgtttaa aataaaatac tctagcatgt
    29521 tctaagtatt ttcctatgat gcttctaacg cgtatgtttt tgctgtattc ttcatcaggt
    29581 tttaagcaac aaattccgcg tatgataaga tcgatttgca ctccttccat acttgcttca
    29641 taaagcgctt gtatgatatc actatctaca agagaattca ttttagctac aatcacacct
    29701 tcatttttct tgcttgtttc aatgcgtatc atttctaaaa ctttttcttt gatttgattt
    29761 gggctcattg aaagagtttg aaggcgacga tttttgctaa agcccgataa gatgtgaaaa
    29821 aagcttgtcg tatctcttgc aaattctgct ttgcttgtaa aataactcac atcagtatag
    29881 attttagcac tgcttgcatt ataatttccc gtacttaaat gcatataaaa tttaagttta
    29941 tctccttgtt tgcgtatgac ttgagaaacc ttagcgtgga ctttaaaacc tgtaatgcca
    30001 taaataacat gagctccggc attttctaaa gcttttgccc aatgaagatt gttttcttca
    30061 tcaaagcgtg cttttaattc taccatcaca gttacttgtt ttccatcgct tgcagcatca
    30121 attaaagctt gaactatatt ggaatttttt tcaactctat aaagtgtcat tcttatggaa
    30181 attacttcag gatctttgct tgcttctttg ataaatttat aaactggatc aaaactttca
    30241 aaaggttgta taatgagtat atcttctttt tctacagcat caaaaataga taaattctca
    30301 tcaaaaggtg gtaaagtttt aggcgtgtaa agtgggctta aaagatgcgt aaaggtttta
    30361 tttcctgcga tttgccaaag gctagggaga ttgagtaaaa tagaatattc ataaacatct
    30421 ttatgaaaaa ttttcatgtg agtattaaga aattctacga tttgctcatc tgcatctttt
    30481 tgaatttgca atcttacaaa agctcctttt ctgcgaagct tcaagccttg ttctaaaatc
    30541 atcataaaat catcagcttc ttcctcttct attaccatat ctgcatttct agtcactcta
    30601 aatgctgctg aagctaagag tttatagcct ggaaaaattt cttctgcgtg ttgatggact
    30661 atactttcta taggaacata aatatttgca cttacttcat aaaaacgagg taaaactctt
    30721 ggaattctaa tcattccaaa ttttacaagt tcaggatgcg atttatcgca aattttaacc
    30781 gctagtgaaa aagataagtt gtttaaatgc ggaaaagggt gagtagcatc aacagctatt
    30841 ggaacaataa caggaaaaat attagagaaa aaatactcat cacatttttg ttttaaattt
    30901 tcatctaaat tctcataatg ttttatgaaa agattttctt tttctaattc acttgtgatt
    30961 tcattaaaat aacgctccaa aagttctttt tcttggtgta aatatttgcg tatggctttt
    31021 aattgttgta acggggtcat ttcatcgcta ctgcttgcat taactccagc tgaaaaaagt
    31081 tgttttaagc ctgcgacgcg tatcatataa aattcatcta aattagtgca atatatagct
    31141 ataaatttta atttttctaa caagggtaaa tttttagaac attggtctaa aacacgagaa
    31201 ttaaagcgaa gccaagaaag ttcgcgattg ataaacatat caggacttgt ttgcattaat
    31261 ttttcctttt ttagttgtat tttatcattt attttgaaat tattgaataa aagttttaaa
    31321 tttttttagg ttaattaaga gtaaatatat ctttaaaatt atattaaatt catctatgtt
    31381 agaatcacaa aatttatttc tgggaaattc tgtgacattg ttgtttcatt gaagatttta
    31441 agaaatgata attttaagga ggaaaatttt gaagaaaact tcgaatcttt ttactatttt
    31501 tcttgttttg ctttttgttt tctttgcggt tgggttttat actttttata acgctaaggg
    31561 cacatcttat ttaagcaatg caagtgaatc ttgtaataac tgccatatta tgaatgaagt
    31621 ttataacgaa tacatggcag gaccacactc tcaaaaagtc aaaggcgaac caagagcaac
    31681 ttgtgtggat tgtcatttgc cacataattt tgtagctaag tggatagcta aagcgcaaag
    31741 tggtttagga catgcttatg cttttacttt taaacttgat gagttgccta caaatttgag
    31801 tgcgactgaa aaaagcagaa aaatggtgca agaaaactgc atacgctgtc atgcagattt
    31861 tgctcaaaca gctatcaatg ctacaacaaa tccacatgca gacaagtcat taaattgtgc
    31921 ttcttgtcat aaagatgttg gacataaaca cggaatttaa taaggagaag atgaatgaaa
    31981 aaaaatattt tacgcttagg tattgtcgtt ttggttttac ttatagcggg agttttatgg
    32041 ctaaataatg atatcaatca aaaaaaagaa gatgaagcaa ataaaaatgc cattgcagca
    32101 aatgctgatt tttctttgct tagcgatgat gatccaaatt ttgaaaaatg gggtaaggtt
    32161 tttccagagc aactaaaaat gtatttaacg gttgaaaaag aagagcctaa ggctactgaa
    32221 tttggtggta atttagctta ttcaaaatta attcgctttc ctcaattaac catactttgg
    32281 gcaggatatc cttttagtct tgatttcaat gaagaaagag ggcatttttg ggttcaagta
    32341 gatcaaatga aaacagcaag aaacaacaaa gattttctta atgcccatgg acttgctgct
    32401 tttaaaggtc aacctgcagc ttgtatgaat tgtcatagtg gatggactcc atggcttata
    32461 aaaaatgttg ctaaaggaga ttttactgct tttaactcta caaattattg gactatgatt
    32521 aaaaatatcc cagctgttga tggtatagta gaaaattcac ctgaacatgc aggcccacat
    32581 ggtggtaaaa gaatgggtgt aacttgtgca gattgtcaca atccaaatga tatgagttta
    32641 agacttactc gtccagcagc tattaatgct ttagtttcta gaggatatga aaaagatcca
    32701 gtacaaggcg taaaagctac aagagaagaa atgagaactt tagtttgctc tcaatgtcat
    32761 gttgaatact attttaaacc aacaggggaa aaagtaaaag taatgggtga aactattgta
    32821 gatgatagtt ctaaaaaatg gtggaatgga actcagaaaa attatgatga gtatgagttt
    32881 tggagagatg gcaataaagt taaagagatt gaaaccgatg gtatagtttt aacttttcct
    32941 tggagtgagt ggaaaaaagg acaaccattt agaattgaaa tgctagatga ttattatgat
    33001 aaagttcgtg gagtatttgg agctgatttt actcataaat taacaggagc gcaaattatt
    33061 aaaattcaac atccagaaag tgaactttat agtggcggtg tgcatgctgc aaatggagta
    33121 agttgcgtgg attgtcatat gccttatgtt agagaaggag ctaaaaaggt tactcaacac
    33181 aatatcactt ctcctttaag agatattaac tctgcttgta agtcttgtca taaacaaagt
    33241 gaagattatt taaaagctca agtgcttgac atacaaaaca gcgttgcaca tgatcaaaga
    33301 actgcagagt atgcaattgt tagtttgatt atggatacta aaaaattacg cgatgaacta
    33361 ggcaatatgg aaaaattcca aagcgatgga aaagctgatg cgaaaaaaat tagcgaagag
    33421 ctaaaagaag ttttagaact tcatcgtaaa gctcaaatga gagcggattt tgttaatgct
    33481 gaaaactcaa ctggtttcca taatcctcgc gaagcttcaa gaatgttatt gcaagctgtt
    33541 gatatggcaa gaatgggaca aactaaactt gtagaaattg cagcggcaaa tggaattaaa
    33601 gattttaaaa cttcaaattt aggttttgaa gatattcaaa aatttaatcc aggagagctt
    33661 tattataagg tagatgttaa taatcataaa gctggagagc gttactatgc agatgaaaaa
    33721 gatgttaatg gcaatcctcc aaaagaactt ttagagcatg ataaagagct tgctccttat
    33781 aattatcaag tgattgataa aaaataattc ttaagcccta taatcatagg gctttttctt
    33841 ttctttgttt taaaaaatat aaacttttta tttaaaattc acttttgctt cactttgttt
    33901 tgtcaaaata tcacaaattt tgataatcaa aaaggagtta aaatgatcaa taaaaataaa
    33961 ttgtttagac aggttcatat ctatcttagt ttgttctttt tgccttgtgc tttgcttttt
    34021 gctttaacgg gtatagcgta tatttttggt attaatcaag atgtgggctt aaaagttgag
    34081 cagtatcaat tgtcaaaagt tatagaaagt ggtaaagaaa gagaagcttt aatagagtat
    34141 ttaaaaacaa atggtttaaa agtaccatct aatacaaata taattaaaag taaagataaa
    34201 ggtataacaa taggtggaac tcattatagt gctaatataa ctcaaaattc tactaatgaa
    34261 tacaatatta ccttaaaaac aagatcttta cttggagata tgattatgct tcataaagat
    34321 aagggtgctt ggtatttttc tgtgcttagc gtaggttttg gtattacttt atttatgctt
    34381 tatatttcag ggcttatgat tactttgttt gcaaataaaa aagatagaag taaacaattt
    34441 gcagttcttg gagtaggggt tgttgtaact ttgcttttgg cttatcttag cctttgattt
    34501 ttcctagctt tttaagctag gtattattta tttttttgta taatcatact ttactttatt
    34561 ggacagatgg gtgagtggct gaaaccacac ccctgctaag ggtgcagatc ttaacgggtc
    34621 tcgagggttc aaatccctct ctgtccgcca ctaaaacttt cttgaaaatc ccaagtattt
    34681 tattaagtat cgaagcaaga gactagccct tgcgaagtta tattatttta cagcgttttt
    34741 gatttctaaa atcatagttt ttaaagactc tagtccattt ccacttgcta aataccagta
    34801 ttctggatca agatagatga tttttttgtt ttgcgctgct ttggttttag cgacaagtgc
    34861 attatcgagt atgccttgag cacgttcttt gttgcctaag atgacatttc tatcaacaac
    34921 aaaaatataa tcaggatttt tttctaatat aaattcagaa ttgatacttt ttccgtgtgt
    34981 gcctactttt atattctcat ctaccgcgtt aatccctaaa acatcgtgaa taatcccaaa
    35041 gcgagattga ggaccaaagg ctgaaatttt gttagaattt gtaagaatga taagagcttt
    35101 tttatcttca tcaactatac ttttggcttt ttcaatttca tttttaatat ctgaaatttt
    35161 ttctaaagct tctttttcta aaccataaag ttttgcaacg cttaagacat tgttttcaaa
    35221 agagcttaaa aaatttgcat tatcaagacc tacaaataaa gttggagcta tttcttttaa
    35281 tttgtcataa aatttacttt ggcgtccaga aatgatgata agatcaggtt ttaaagcatt
    35341 aatggcttca aaatcaactt gttgtactcc acctacacta ggtttgtttt taaattgttg
    35401 taggtatttt ggtaaatttt tagcaggaac gccaacgact ttatcattta attttaaagc
    35461 atcaaaagta tctaaaattc caagatctaa gatcactacc ttagaaggat ttttagggat
    35521 tttattttct cctagactat ccttcactaa aaaactatca ccctcatcgc tcatactaat
    35581 aggcaaaact ttcaccgtag cagtgttggt ttttgttgta gaacttgcgt tgttttcatt
    35641 tgagtttgaa ttacaagctg ttaagattag acttaaaaaa atgcaaaaaa tgcaaaaact
    35701 aaagattttt tcatattttc tcctttttaa aaataaatac aaattttctt accattaatt
    35761 tgacttacgg gtatatccat atcataaatt tgttttaaat tttcttgatt gatgatttca
    35821 tcttttgagc cttgttttaa aagcttccca tcttttaagg ctatgatttc atcagaataa
    35881 atcgaagcaa aattaatatc atgtaataca acagctatac ttttgttaaa gtctttgact
    35941 aaatttttca ttagttgcat gatttgtacg ctatgcttca tatcaagatt gttcaaaggt
    36001 tcatcaaaca ttataaattc agtatcctga gcgatgatca tggctataaa agctctttgc
    36061 ttttgtcccc cgcttaatgt atctaaaaat tcatttctta agttgctaag ttccatgtat
    36121 tctaaagctt cattgatttt gattttatcg tttgtattaa gtcttccttg agaatgcgga
    36181 aaacgcccaa aagcgactaa ttcttcaact tttaatctta aattgatatt gttttgttgt
    36241 ttgagaatgg aaattttttg tgctaagatt tgctctttat aattttttaa attcattcca
    36301 tcgatataaa tttctccact actaggtttt atcaaacgac ttgctagagc taaaagagtg
    36361 gattttccag cgccattggc tcctattata gaagtgattt tgcctttatg aaaatcaagg
    36421 ctaagatctg aaataatgac tttattatca taaaatttgg tgatattttt tagtttaatc
    36481 ataatttatt accctttaat acaagataga taaaatatat cccacctaag aaattaataa
    36541 ccacgcttat agtggcatta taatcaaaaa ctctagagac aaaaaacacc cctccaagca
    36601 aagccaaaat actaataagt atacaagcgc ttagcaaaat actatgcttt gcagttttaa
    36661 atagctcata agtgatattt actactaaaa gtcctaaaaa ggttatagga cctacaagtg
    36721 cggtgctaat agaagttaaa atagctatga taatcatcaa ttgttttgaa attttttgat
    36781 aatttatccc taaatttatc gctaaatctt tgcctaaatt taaaggatct aaaaatttca
    36841 tatagcgaaa aatccatata aaacttaaaa agctaataat ataagcaaga attaaaacat
    36901 caaaagcaat attatcaaaa ctagcaaaca ttcttccttg tattaccatg aattcatcag
    36961 ggtcgattag tacttcaaaa aaagagctta aagtgctaaa aagtgttcca aaaactaaac
    37021 ctaaaagcat gataagataa atacttctat cactactaaa taaaatctta taaagtccta
    37081 gtgaaaaaac caccatacaa actagagtga ttaaaaaatt gatatcgttt ttataaacac
    37141 ttaaattagc cgcaccaaaa gaaaagataa gagcactttg aagcaacata tataaagaat
    37201 ctaatcctat gatagcaggg gttagaattt tgttattgca taaagtttga aaaatcactg
    37261 ttgaaacagc gatacaaata gctactataa taatagccgc aatttgtaaa aaacgacttt
    37321 ttaaggcata ctcatcaaag ccatttaaac ccacaaatat aaaaatccct atcatgttaa
    37381 gtgttaaaaa gcttaaaatt agcatttttt tacgcataaa ctttcctttt tagtaaaaga
    37441 aagataaaga ttaaagaccc taaaacacct gtagtgatac ttaaaggcat ttcaaaagga
    37501 aagataacaa gtcttgaaat gatatcgcaa acaagtaaaa acaaagctcc acaaagtgct
    37561 atatagataa gattttttct aagattatca cctagataaa gagctactaa atttgggata
    37621 attagcccta aaaaagggat aatcccaacg cttacaatca ctaagctagt gataatgctt
    37681 acaatcatta agcctaaaaa taatatacca ttataagaaa ttccaagatt taaagctata
    37741 tcttcaccca tgccaactat ggtgatttta tgagctaaaa aataagcaag tataaaaagt
    37801 ggtaaagaaa tgtagagcaa ttcataattt ccctgtataa catttgccat actgccttgt
    37861 agccaacctt ggatattttg tatataattt aaagcatagg caaaaaaagt ggttatagca
    37921 ctaataatac ctccaaacat caagcctatc aaaggtacaa aaatcacatc tttgagtttg
    37981 atttttctta aaatttggat aaatataaaa gaacccaaaa gtgcaaatat agaagcaatg
    38041 atagcttgag tgaaaaaaga cgctccagta aaaaatatta aagaaataag tatgccaaat
    38101 ttagcacaat ccatggtccc tgctgtagtt ggggaaacga atttattttg cgtgagttgt
    38161 tgcatgataa gcccacatat actaagactc attcctgtga gtaaaatcgc tataagtcta
    38221 ggaattcttg tgagagttat gatttctagt tgagtggagt taagattaag aatatctttt
    38281 acattgatac tgataactcc tataaataaa cttatcattc caaagaataa aagtaaagct
    38341 ataagcactt ttaaactcaa tatatgctta aaaaacaaat ctttccttat agtaataata
    38401 attatcaaaa atgaaattgt aatgaaattt gttttaagaa atgataaaac tataaaggat
    38461 attttagtaa gaaatcaaaa atccagtgga aagtctttgc aagtgtttgt tatagtctat
    38521 aaggctttct ccatagccat taaagtattg taaataccaa taaattccgt tattaaaaat
    38581 atcatatcct agatcaactt gtatagcgcc tttgttattg tggaatttaa gattatttct
    38641 tagcataaga ttgataaaat aatcatcacc taaatacgct aaattcacat caaaatttcc
    38701 catataatgc aagatggcag gattatcatc atcttttttg ttttcaggaa ttctatacca
    38761 aaggcgtgga acaaataaaa atttattata taaaatagca gtagatacat aaattctatt
    38821 ccatgagcga gattgtaaat tctcatctcc cttgccattg ctttcatgca atatacctac
    38881 gcgtagattg ttaaaaaatt cataatcttt aagatataaa ggaagatcta taaaaaattc
    38941 tggttgatag ttggtttctc taaaaggaga agaatgctca taaatttgcc accaagaagt
    39001 ttgagtatag gctatataat atttttcatc tagtcctagt aaattttcaa aaagtctttt
    39061 tttaacacta agttggaatt tcgcctcact cttattatta tttgttccta aagaattaaa
    39121 actataagta aaaggtaaaa aataattcat cttataagag ctaatgccaa ggggattaaa
    39181 gctttcattt tcaccaagat aattagccaa agctaagcga gaaaagtctt gtttttcttc
    39241 tttttttata gtgatagaat tttgcatttg tgttgcttgg cttgagttat tttgttcttg
    39301 agaaatcaaa acagatgaat tttttaaagc gagttttttg taaatttcca tagctttttt
    39361 ataatcgcct tgtttttcat actctaaagc ttgttgtaaa tcactagccc atataaaaac
    39421 gcataagctt aaaaataaag caatttttct cattttaact cgcttttaaa tttttcatat
    39481 tcttcataaa aattaagatt taaaaaagca tcttcatctt caaattctac aaatttggtt
    39541 ttaatctcag aaaataaaag tcctattttt tgttcatttt tttctaagaa atttttacaa
    39601 gtttgagcta aagagctgtg ataaaagcca cataagggat gtttatgcaa aggggttttt
    39661 gctatgatta ttttatagtt ttgttctaaa aaaggaagca tttttaaaag ctcattttca
    39721 cctactttag gactatctac acttaaaaca aaaacaaatt catttttaaa atttgaaagt
    39781 atagagtaaa gcgcaagcat aggagagtaa acttcaaatt ctaaagaatc ttttatcaag
    39841 ctaaaatggt tttcaaattt gtcttctttt gcactcacat agacattttt aaaaatttta
    39901 gaaaatttct ctacttgaaa ttgagttaaa ttttgatttt taagaatcaa tttgctttta
    39961 tcttgtccca tacgactaga tttgccacca cataaaatca cgcaatttag ctcattaagc
    40021 tgcacaaatt tcctttttta atgtaattct accacaaatt cgccaaaata ttttataatt
    40081 tcttttatga aatacacaga acttttacaa ttgcaaactt ttttttctca gtttaaaaaa
    40141 atcgatttta tcaagcgtat taatgacaat attttggaat taagctttga tagagaaaga
    40201 tttatttttg atctcactcg tgcaatgagt gcgatttata cggctaaatt taatgcaaaa
    40261 aattataatg caccttttga ttttatgctt aaaaagtatt ttagcaatgc ttttataaag
    40321 gaagttaaag tccttgaagg caatcgtatt ttatgtttta gtgtaaaagc taataaggct
    40381 tataaaagct atgagagcaa gatttatttt gaatttacgg gtaaaaatac caatgttatt
    40441 cttacagatg aaaaagattt gatcatagag gctttaagac acattgataa aagttatcgt
    40501 gttgtaaaac ctaatgtgat tttagagcct ttaaagcctt ataaaatgga tgaaaatttt
    40561 gaggaaatca aagactttgc agattatttt tctcgcaaat ttacaagcat ttatgagagt
    40621 aaaatcaaac aaataaaaaa tttaaaactt gcacaagtag ataaaaaaat acaaaattta
    40681 caagaacttt tttctagtct agatgaagaa aattctttac tcttaaaagc tttagaatac
    40741 agaaaaaggg ctgatgtatt gtttgcaaat ttgagtgttt taaaagatta tgaaagggaa
    40801 tttaagcttg atgattttga aggcaaagag cttgaattta agcttgaatt tagtcctaag
    40861 cgaagcgcta atttatatta taaaaatgcc aaaaaattag aacaaaaagc taaaaattta
    40921 aacatacaaa ggcaaaattt aaaagaaaag ttagatttta ccttgagttt gaaagaatta
    40981 ttgcttcaag ctaagagtga gatagagctt gaaattttac tacctaaaaa aaatagcaaa
    41041 aaaaatcaag attataaaca agaagatctt gtggcaaatt tttattacaa tgagtttaaa
    41101 atttgtgtgg gtaaaaatga aaaaggcaat gaatttttac ttaaaaatgc taaaaaagat
    41161 gatttgtggc ttcatgtaag ggatattcct agcgcacata ctttgattgt atcaaacaag
    41221 caaaaaatca gcctcgatgt gatagaattt gctgcaaggc tttgtgtaag cttttctaag
    41281 ttaaagaaag gttcgtattg ggtcgattat accttaaaaa attttgttaa ggttcagcaa
    41341 aaggcgtttg taaattatac aaattttaaa agtattaata tcacaaagga ttaaaatgcc
    41401 agttagccct ttaggaaata tcaattatat aaatcagaat atggcttatc cagctacaca
    41461 agcaagcaat gagcttgcaa aagaaggttt tgcagctacg ctaaatatgg ctgaatttaa
    41521 tgaaaaagaa aaaactttaa acaagcttga aaaagtcaat gagactcatg aaatcaaaga
    41581 agagatcaaa gaaaaagccg aacaagaaga aaaaaagaaa aaacacaatc aagaagctaa
    41641 aaccagcgat gatgagaaaa atgaagaaga tgagtctaaa gatccaaatt ttaaagacgc
    41701 acaaagcatt catcgcctag atattagtat ataaggaaaa atatgtttaa tacaactaga
    41761 attatttcag ctcttgtgat gataggggct attattatta tcgcgttgat tgatcaattt
    41821 tttatcaatt ttatcgtttt tgcggtttta ttgtatttat cttttagtga agcaaaaaaa
    41881 ctttttgctt tagaaaatat ttctattatc cctttggcta tagcttttat tttgggaagt
    41941 ttatcgcata aagctttgct ttttgggatt ttagctttgt tattagtcgt tggatatttg
    42001 gtttataaaa aggcttcctt aaaaccagct cttatttata tttatcctag tttgcctatt
    42061 ttagcacttt ggcaagtgta tttagatcag ggtatgtttg cgcttttttg gcttatcatt
    42121 atcgttgcag cttgcgatag tggggcgtat tttatcggaa aacttatggg taaaactcct
    42181 ttttctccaa caagtccaaa caaaacctta gaaggtgtta taggtggctt gatttgtgcg
    42241 agtgttattg gaactatttt gggaattttt gtttatagtt tttggctttc tttactttgt
    42301 tcgttttttg tagcgatttt tgcagtgatt ggagatttgt ttgagagtta ttttaaaaga
    42361 gaagcaggtg taaaagatag tggagatctt atccctggtc atgggggcgt gctcgataga
    42421 atcgatgcag tgatcattgc tgcttttgtg atggttactt ttttatgata ctttttggaa
    42481 gtacgggcag tataggagta aatgctctta aacttgctgc tttaaaaaac attcccattt
    42541 ctgctttagc ttgtggggat aacatcgctc ttttaaatga gcaaatcgca aggtttaaac
    42601 ccaaatttgt tgccataaaa gattcaaaaa ataagcattt agttaaacac gatagagttt
    42661 ttatagggca agaaggttta gagcaaattt taacagaatg tcaagataag cttttactca
    42721 atgccattgt aggttttgca ggacttaaaa gcactttaaa ggctaaagag cttggcaaaa
    42781 acatagcttt agctaacaaa gaaagtcttg tagtagctgg gagttttttg aaaggggcta
    42841 aatttttacc cgttgatagt gagcatgcag ctttaaaatt tttactcgaa ggtaaaaaaa
    42901 atatagcaaa actttatatc acagcaagtg gtggagcttt ttataggtat aaaatcaaag
    42961 atttaaatca agtcagtgtc aaagatgctt taaaacatcc taattggaac atgggagcaa
    43021 agatcactat agatagtgcg actatggcaa ataagctttt tgagattata gaggcttatc
    43081 atttatatga ttttaaagaa attgatgctt taatagaacc aagatcttta gtgcatgcaa
    43141 tgtgtgaatt taaaaatgga gctagcacgg cgtatttttc aaaagcagat atgaaactag
    43201 ctatttcaga tgctatattt gaaaaacaag atacgcctat tttagaggct gttgatttta
    43261 gcaaaatgcc tgctttaaaa tttcatccaa tcagcacaaa aaaatatcct atttttaagc
    43321 ttaaaaatac atttttaaaa gagccaaatt taggtgttat catcaatgct gctaatgaag
    43381 ttggtgttta taatttttta gaaaataaaa gtggattttt aggtatcact aaatgcattt
    43441 ttaaagccct tgatcatttt ggagtgccta aaatttcaag tatagaagag gtttttgagt
    43501 atgattttaa aacaagagag tatttaagga gttaaaatga aatttttttt aacaatttta
    43561 ttttttataa caagcatttt tgctttagag ctagacttta gcgtaggaga aaatggaaaa
    43621 agtctagatg ataataatac agttttaatt tttggtggaa ttcaaggtga tgagcctggt
    43681 ggatttcatg cggcaagttt gcttttgagt gattataata tcaccaaggg taagattata
    43741 gtggctccaa atttagcttt tgatagcatt atcaagcgtt cgcgtgggaa taatggggat
    43801 ttaaaccgta aatttgcaag cattagccca aaggatcctg attataaaac tgtgcaacgc
    43861 attaaagagc ttattttact tcctgaagtt agtatggtga tcaatcttca cgatggttgg
    43921 ggtttttata aacctactta tatcgatgcg atgcaaaatc ctaagcgttg gggaaattca
    43981 agcgtgattg acacaagtga aatcaatgca agcaaatacc ctgatcttga aaatattgcc
    44041 actcaaaccg taaatagtgt caattcttcg cttgctgatc caaagcatgc ttatcatctt
    44101 aaaaacacca aaacccaaga gcttggcgat atggaaatgc ttaaagcttt gacttatttt
    44161 gtgatttcaa atcacaaagc cgcttttgca aatgaagcga gtaaaaatct gcctgtaaat
    44221 ttaagagctt attatcatct tttggcaatt gaaaattatt taaaaactgc aggaattgaa
    44281 tttagtagag attttgaact cactccacaa ggggttgata aagtcataaa taaagagctt
    44341 gaagtaaaac tttttgatga tagaatttta ctttctttaa aaaatccaag aaagcttatc
    44401 aactatgtgc cttttccggt aaataaagag ttaaattata acacaagcaa tgaacttacg
    44461 gctattatcg cagaaggaaa ttctttttat atccagtatg gcaatcgttt tcaaacaaga
    44521 ttatatcctg agtatttaga atttagcgat gcttttaatg aggtaacttt tcaagttgat
    44581 ggcaatgaaa ccaccgttcc ttttggaacc aaggtgaaag taaaagagaa ttttcttatt
    44641 ccaaagatag ctaatgtgcg cgtaaatatc ataggctttg atcactcaaa agatgaaagt
    44701 ggtattttag ttcataaaaa aaatatgcaa acacaatatt ctttagatat ggcaggtaaa
    44761 atttatagag tggaatttta tgagttaaga ggggcgaatt tgcaacaact tttagaagca
    44821 aataccaata gcaagttgat caaaaatgct aaaaatttgg atttaaacac tcttaaaatg
    44881 gcaagatcaa aagataaatt cttaggttct attttagtgg aatttgaatg aaaaatctta
    44941 tcctagctat agaaagttct tgtgatgata gttctatagc tatcattgat aaaaatacct
    45001 tagaatgtaa atttcataaa aaaatttccc aagaattaga tcatagtatc tatggaggag
    45061 tggtgcctga acttgctgca aggcttcata gcgaggcttt accaaagata cttacgcaat
    45121 gcaaagagca ttttaaaaat ctttgtgcca tagctgtgac aaatgagcct ggacttagtg
    45181 tttctttgct cagtggaatt tctatggcaa aaaccttagc aagtgctcta aatttacctt
    45241 taatccctat aaatcatctt aaaggtcata tttatagtct ttttttggaa gaaaaaattt
    45301 ctttagatag gggaattttg cttgtcagtg gtgggcacac tatggtgctt tatcttaaag
    45361 atgatgcaaa cttagagctt ttagcaagca caaatgatga tagctttgga gaaagttttg
    45421 ataaagtggc taaaatgatg aatttaggtt atcctggtgg ggttatcata gaaaatttag
    45481 caaaaaatgc caaacttaaa aatatctctt ttaacacacc tttaaagcat tctaaagaac
    45541 tcgctttcag tttttcaggg cttaaaaatg cagtgcgttt agaaatttta aagcataaaa
    45601 atttaagcga tgatataaaa gcagaaatag cttatgcctt tgaaaataca gcttgtgatc
    45661 atatcatgga taaattagaa aaaattttta atctttataa atttaaaaat tttggcgttg
    45721 taggtggagc gagtgcaaat cttaacttgc gttcgcgttt gcaaaattta tgtcaaaaat
    45781 ataatgcaaa tttaaaacta gctcctttaa aattctgctc tgataatgct ttgatgatag
    45841 caagagccgc agttgatgct tatgaaaaaa aggaatttgt aagtgtagaa gaagatattt
    45901 taagccctaa aaataaaaat ttttcaagga tatagatgag aaaagctttt accatattag
    45961 aacttgtttt tgtgattgtt atcttaggaa ttttagccgc tattgcttta ccaaaaatga
    46021 gttcaagcaa ggatgaagcg gagattagca agtctttaaa caaccttaaa actttgatca
    46081 atgacataag catttatact ttaaaaaatg atcatttaag ctctataaaa acgatgagta
    46141 atgtaagtgg ggttgaaaat gtcgatcttg gcaatttcaa tggcacaaaa gaagtaaatt
    46201 ttcgcgtagg cgatgataaa gaatgcttaa aacttgtttt tatagataga gcggatttta
    46261 tactcatggg aatttcaagt aatgaagcaa gcaaaaatgc tatcatcaac gcagccaatc
    46321 aaagccatga agatttagaa aatatagact ttacaagctc ttctagcaat aaagcttgtg
    46381 tgatcttaag taagaatgaa aattttaaaa acctagcaag taaaacttat cttttaatag
    46441 gggaaatgta atgatagtga gcaaagctta tgagattgac tcttgtgatg atgtagagct
    46501 tggtataaaa agagaatcaa agcttgaatt taagctttgg tatgatgatg aaaaaacacc
    46561 tgaagccttg gtgtttgtgg tgcaaggtat gggtgatgat atatcatcga tccaatatgt
    46621 tggtgattat atggtaaggc aatttaatac tgctgtagtt ggagtaaatt atcattgtat
    46681 tggcaatcgt cctcaaactg gatcaacttt ttatttagat gatatagaca agcttatttt
    46741 aaaagcaagt tgtgaagctg cggatatcaa gcttccttat gatgttgata aaattcaaga
    46801 ctataaacaa atgagtgaaa tttttcattt tattaactat agcattgtcc aaggcaagca
    46861 aaaaggtaat tttacaccaa attatttttt aaatttgcat gtgagtttgc aaccgacaaa
    46921 aaacgagtat caaaattttg ggatcatgca agctcaagat cttttaaatg tcacacttta
    46981 ccttaaaaaa catgctcctt ttgatactat ggggggggta tacccgttat tatgataggt
    47041 agttctcatg ggggatattt agcacatttg gcggctaaga ttgcaccttg gttagtagat
    47101 ggagtgttgg ataattctgc atacgcgaag tttttatgga gagttgtagg ttttggaaag
    47161 gaaatagatt ttatgcagtg tagtgaattt tctacttttg attttttcca tcatattaaa
    47221 acacattgtt cgacaaaaac tttttggaca agtaattctt catcgcctcg ttttttttct
    47281 cccgcaagaa gaaaaattcg aaatctttta gaggaagatc atcttttaga acaatcaaaa
    47341 tgtttaaaaa cttgctttat aagttatcat tcgttatatg atgagtatgt ttctttaaaa
    47401 gaaaaaacta tgttctatga agagcttgag aaacttggtt ttgatgtaac tttgtgttct
    47461 gttactaaag aatctcaagt tgatggaaaa tttattaaaa acttaaatca tggcatggga
    47521 attccggtaa aacttttgat taagaaagaa cttcctttaa tgctagaaaa aataaaacaa
    47581 aattcaaaaa aagattataa agaaaaatgt atctcttatc cttgcgagga tttgttgtat
    47641 caatttagcg aaaaagatga caaaatgtca ctaaaaatag ataaaattta aggaaagcta
    47701 atgaccctac tagaaaaaaa catacaagct ttattaagtg gagtaaatga acccttagga
    47761 aataaacttt taaatttcat acaaaataaa acttgctctc gttttaatat agatgaaaat
    47821 ttaaatatct ttgataaaac tcataatgtt ttcatgtatg aaaacttaga agaagaaata
    47881 aattttttct atcaaagtat tttagaaaaa actcctagat atccttttat atgtatttat
    47941 ggtataggca atgctttact gattaaaaat ttagctaaac actataaaca tctttttgta
    48001 tttgaaagtg aaatagaact ttttattcta gctttaagt
//
LOCUS       DAPIVO010000005        44248 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.005, whole genome shotgun sequence.
ACCESSION   DAPIVO010000005 DAPIVO010000000
VERSION     DAPIVO010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 44248)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 44248)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..44248
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.005"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            25..528
                     /gene="ctf"
                     /locus_tag="RJ239_000267"
     CDS             25..528
                     /gene="ctf"
                     /locus_tag="RJ239_000267"
                     /EC_number="1.16.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin"
                     /protein_id="HDV7330424.1"
                     /translation="MLSKEVVKLLNEQINKEMYAANLYLSMSSWCYENSLDGAGAFLF
                     AHASEESDHAKKLITYLNETDSHVELQEVKQPEQNFKSLLDVFEKTYEHEQFITKSIN
                     TLVEHMLTHKDYSTFNFLQWYVSEQHEEEALFRGIVDKIKLIGEHGNGLYLADQYIKN
                     IALSRKK"
     gene            571..1947
                     /locus_tag="RJ239_000268"
     CDS             571..1947
                     /locus_tag="RJ239_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HDV7330425.1"
                     /translation="MTYFSLEFSILMIAFFAIYWTFKNDYKIQNILILIFSYIIYILI
                     NPYFALVLFIYTFFIHYFALLIFVRRKRYIFATCMAFIILNLCFFKYFPSIKGSVDEI
                     LNFFGLEFLNIDLVLPIGISFYTFTSITYLVEVYQKRRLESFLNLATFLSFFPTLLSG
                     PIMRSSFFFEQAYQKREFKHANLIIILLVFGIVKKVLIANYLGIYAKSILDFPQSYNF
                     IQLLSAIYAYAIQIYCDFSGYVDLVCAFALMLGFTLPSNFNMPYLAKNLKDFWARWHI
                     SLSTFIRDYIYIPLGGNRKGMPRTIVNILIAFILSGMWHGNTLAFIVWGLLHGIGIVF
                     IHLLALSKFSLQKIPALGRFLTFQFVCFTWIFFYYSKNLEDAIEYFKACYYNFFQIPS
                     YNDIYMLVAFGVLFMIYPLFINFKEYCIKILNLTPFLLKPFIIAFILLLVFAFMPDGI
                     PDFIYSSF"
     gene            1948..2958
                     /locus_tag="RJ239_000269"
     CDS             1948..2958
                     /locus_tag="RJ239_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF459 domain-containing protein"
                     /protein_id="HDV7330426.1"
                     /translation="MSVVRFFFILIIVLGLVVVVMNQSISSYIEQKYHFAFYPHNDLL
                     KEANGFKIKLEQIRAILSNEPLLQTNEETTNQESKSTDENLSKIDKVLNTLENDENTS
                     HKETNLTLIQDANISFIDNTKLELQNGDEFLFIGDSLMQGVAIALNRDLRNLNLKVTD
                     LSKQNTGLSYKSYFDWSKATNEAFIKNSNIKYLVVLLGANDPWDIKKGGNYHRFGSLS
                     WIDIYTSRVDEIIKIAKKHKAKVFWFEIPPVKKEDLNKKIQVLNKIYSDEILKNKEIF
                     INTKLFFSVNDEYSAYIKDENNRSIKVRTDDGVHFTPSGAREMSKLLLEHIKLKEENA
                     SK"
     gene            2945..4123
                     /locus_tag="RJ239_000270"
     CDS             2945..4123
                     /locus_tag="RJ239_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HDV7330427.1"
                     /translation="MLVNKFKIILLFFIIFTSSYAQNLNTNDTIDSILNQNKNHSALT
                     SYVLKKDLKNLEKKLEKNQNIGIRIYGDSHMAADFFPRVIRGYLIRSNSIGFAYPLQP
                     KYQQNLNLVYSYKNFEILNSRNPANAGHNFPLGGIIAKAKIKGAKINLDTTLDKKKFK
                     IGFLFKAKQNTNAFSIKDAKNQSYELRTTQINKWSYKELELDLPLQISALQKDAELGG
                     YFITNKDNNVFLDTIAINGAKSDLWLSWNQTVVKKELGLLHNDLIILAYGSNDALFKG
                     FEKQKFKNNLKKWISILKTYNKNAVIMLISPPTVVQKQGKNYKLAPDFFTIRKALYEV
                     AKEEKTLIFDMHQFMQDSGGKNKWIEQKLSLNDVHLTIKGYELMAKKLLEDLKNIIDY
                     "
     gene            complement(4126..5496)
                     /locus_tag="RJ239_000271"
     CDS             complement(4126..5496)
                     /locus_tag="RJ239_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDV7330428.1"
                     /translation="MKIILSIFLAFFLSACGVKLSLPKEVDLTQEQMKDLNLTYDWYR
                     SYDNAKLNEFLNFVLLNNSDINIARKTLLSALARADLIDYDLYPTLSGNLGFGADKDL
                     NSGKQSKNFNNSLNLSYELDIYGKLRDSASASEFSAKASAYDLENLKISMINTALNDV
                     FELAYFNDVDKLLRAYLSNLEQMKELYNYKYKLGKIEELDLLNIEQSLLRAKQNLLSN
                     DQNRNLLIKNLQDLLARQEGFAYIEYFKTLSLNDFKTLSPDFNIPLKALAYRADVRSK
                     LNSLKSAFKDYSSMQKSILPSISLGGALSGSDKKIDDSFKFEILSGNVKISLPFLDYG
                     RVKQNIKISQFAYEQLLISYEQVLQSAMNEFALNYKDYQSDTLLLQNLQNINIKQELI
                     TKAYYEKYILGKSELKDYLDANNTLNSTQQEFLRARFNLLKTINSYYQITALSFNDKN
                     LEFPKY"
     gene            complement(5498..7423)
                     /locus_tag="RJ239_000272"
     CDS             complement(5498..7423)
                     /locus_tag="RJ239_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7330429.1"
                     /translation="MIFLKNICKNIGENAILKNVSLSIEKGEFVAIIGQSGSGKTSLL
                     NIIGTLDTPSSGTYVFDEYEVTKLNNDEKARLRREKIGFIFQRYNLLSLLSAKENVSL
                     PAVYAGKNLQERSQNAKKLLNDLELAHKLDSKPNELSGGQQQRVSIARALINGGELIL
                     ADEPTGALDSKSGIMVLEILQKLNEQGHTIVLVTHDPKIAAQAKRVIEIKDGEILSDT
                     KKEKAQEKLILKTMPKEKKTLTLLKNQAFECFKIAYSSILAHKLRSILTMLGIIIGIA
                     SVVCVVALGLGSQAKVLESIARLGTNTIEIRPGKGFGDLRSGKTRLNFSDLETLRSLE
                     YLEAVDAHSNTSGVATYTNISLSARAEGVGVNNFAIEGLRIDAGRILNNDDVKNSTNV
                     AVLDFNAKKNLFPDEKSENILGRVVLFNSQPFKIIGVLQKDTDKPIEDNVVRFYIPYT
                     TLMNKLTGDRNLREIIVKVKDDVSSTLAENAIIRILEIKRGQKDFFTFNSDTFKQAIT
                     ANKRTTTILTACVAVIALIVGGIGVMNIMLVSVSERTREIGIRMAIGARREDIMMQFL
                     IEAVMICTIGAILGVILSIFVIFAFNTLSTDFPMILNAYSVLLGLLSSMFIGVVFGFF
                     PARNAANLNPISALSKE"
     gene            complement(7423..8595)
                     /locus_tag="RJ239_000273"
     CDS             complement(7423..8595)
                     /locus_tag="RJ239_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDV7330430.1"
                     /translation="MKKKIVLIILIAILGSVGAYFIFFNNDEKISYLTQKIQKKDISQ
                     TIEAVGKVYAKDQVDVGAQVSGQIIKLYVDVGTHVKQGDLIAQIDKDKQQNDLDITKA
                     QLESAKANLESKKVALEIANKQYQREQKLYAAKASSLENLETQKNNYYTLKANVAELN
                     AQVVQLEITLKNAQKDLGYTTITAPMDGVVINVAVDEGQTVNANQNTPTIVRIANLDE
                     MEVRMEIAEADVSKIKVGTELDFSLLNDPQKTYHAKIASIDPADTEVSDSSTSSSSSS
                     SSSSSSSSSNAIYYYAKFYVANKDDFLRIGMSIQNEIVVASAKAVLAVPTYAIKSDPK
                     GYYVEILENQKAVKKYVKLGIKDSINTQILEGVNEDEELIVSSSADGLAPKMKLRF"
     gene            complement(8674..9864)
                     /locus_tag="RJ239_000274"
     CDS             complement(8674..9864)
                     /locus_tag="RJ239_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDV7330431.1"
                     /translation="MQKLVENLALKYYDKVVDLRHQIHMHPELEFEEENTAHLVCKIL
                     DEFGIKYQKNIAKTGILAIIEGKKKSQKKPKCVLLRADMDALPVQEKTNLSYASKIDG
                     KMHACGHDGHTAGLLGAALILNELKDEFCGTIKFMFQPAEEGSGGAKPMIESGVLENP
                     YVDAVFGCHLWGPLLENTAQIVSGEMMAGTDIFDLEFIGRGGHGAHPHTCIDPIIMTT
                     QFVNNIQSVISRRLAPYEAGVITVGQICAGTTYNVIPTNAYLKGTVRFLNDKTQDILK
                     SSLEEVAAATAKSNGGDYKLKYTKEFPPLINDEKAVLIARKAFAKVLGEENIIVSSKP
                     DMGAEDFAFLTRERMGAYVFVGISKDLNHPALHHSSTFCWDDENLKVLMQGDVMMALE
                     FLNL"
     gene            complement(9873..10753)
                     /gene="ppk2"
                     /locus_tag="RJ239_000275"
                     /pseudo
     CDS             complement(9873..10753)
                     /gene="ppk2"
                     /locus_tag="RJ239_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344034.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
     gene            10848..12551
                     /locus_tag="RJ239_000276"
     CDS             10848..12551
                     /locus_tag="RJ239_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HDV7330432.1"
                     /translation="MRIFGIILLSFCLCFASILSLNEAFNVKSNSYNNSISIDIELGK
                     DIYLYSNKLKLYINEKDISSLINLPQSSTRGNENVYYQKLNLALPNLLLERFAKNTTN
                     LIKLEFQGCSEQGLCYNPQTWYFDLISKKDAFEISKPYKAQKTDKKTKIESEESSIAN
                     FLATDNFFWILLSFFGYGLLLSLTPCILPMIPILSSLIVAKSNAKFSKKYSFFLSFIY
                     VFFMSLAYAIAGVIASFLGASIQGILQKPIILILFALIFIAFAFAMFGAFRFELPLRF
                     QTFIHKKSEKGKGVVGIAIMGFLSALIVGPCVAAPLAGALIYIANTGNALLGGSALFI
                     MSFGMGIPLLFIGLGLGFIKPGFWMEKVKIFFGFVMLAMAIWILSRIIEENYILIAYG
                     ILGVFFSVFMGIFEKSFTIISKIKKSILILILAYSLSIFLGGLFGAKNFLNPLNFNTI
                     SASKHALSYDYINNFEQLKQEIQTNTKPIMLDFTASWCENCKLLDELTFSDERIIQKM
                     QNYKLIKVDVSENNNEQIKTMKEFNVFGPPVLIFFENGKEKLKITGFISADDLLKKIE
                     P"
     gene            12548..13216
                     /locus_tag="RJ239_000277"
     CDS             12548..13216
                     /locus_tag="RJ239_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HDV7330433.1"
                     /translation="MKIQSLQIGKIKNYKNFQSAFIKDTYLEETQIDFLGVLDDQIAD
                     KIHHGGYHKAIFTNSCQNYPIWERFLNKKLNFGSMGENLSIDGLCEQNVCIGDIHQFS
                     NAILQVSEPRKPCVKISKIHNNPNFTHEIFKTGLSGWYYKVLQVGQIRKHENIKILEK
                     NSTSLSVFELNQLFYSPHQILKQNPNLLDKLEKLNSLISQNWHETIHKRLKNTYDISY
                     MDSL"
     gene            13267..14610
                     /locus_tag="RJ239_000278"
     CDS             13267..14610
                     /locus_tag="RJ239_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDV7330434.1"
                     /translation="MQRQTWSSTLTYILTVAGATIGFGATWRFPYLVGENGGGAYVLV
                     FCIAMIIIGIPVILVENVIGRKAMTNSVDAFKQKWQSIGYMGLLGSFGIMAYYMVLGG
                     WVLVYIWELTLGNFSLANVVSKEFTHQFFNDKIAFNPLGVGIFTTVFVIINYIILKRG
                     IIDGIEKSVKFLMPLLFICLIIVVGRNLTLDGAMAGVKFYLEPDFSKILSPKLLIDVL
                     GQVFFALSLGFGVMITLSSHLNKNENMAKTAIYTGVLNTIIAVLAGFMIFPALFSAGL
                     APDSGPSLVFETLPIAFSHIHFGTIVCILFFVLLLIAALTTSLPIYQVIISVLEEKFK
                     YSKNLSINLTLGFIFILGNLPCILTYGPWRDIVIIKGKNIFDSFDFISGNILFVLTAF
                     FCCIYVGWILGKQESLKELSNNNTLKSSWFGIWFYYVKYIVPLIILIIFIYGILN"
     gene            complement(14602..15477)
                     /locus_tag="RJ239_000279"
     CDS             complement(14602..15477)
                     /locus_tag="RJ239_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-aminocyclopropane-1-carboxylate
                     deaminase/D-cysteine desulfhydrase"
                     /protein_id="HDV7330435.1"
                     /translation="MNFIKTISPIQKINFNGFEFYIKRDDLLGEINGNKARKLAFYIH
                     QRYPKNQSFVSYGGSQSNALAALSIFAKQRSYKLVFACEKISTFLKNNPCGNYALALE
                     NGVDFVENIHSLSLKQFALSLCKKDDVFIEQGIANLEAQYGYMELAQEIQMQSQSLKL
                     DFDIFLPSGTGTSAAFLAKYSKFKVFTCACVGDIKYLKKQILTLDPSYDFSNLEFLTS
                     DKKYHFAKPYKEFYELYMDLKLKCNIEFDLLYDILGLSIALKQEWKKPLLYIHQGGIL
                     GNSTMLERYKFKKSV"
     gene            complement(15464..16417)
                     /locus_tag="RJ239_000280"
     CDS             complement(15464..16417)
                     /locus_tag="RJ239_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDV7330436.1"
                     /translation="MKNESKEDSNFWIAYADLMAGLLFVFILLIGAIVVKYVLTQSDL
                     KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITN
                     YKQLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLS
                     KELQSKLDNNITIDEKIGSISLPAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDP
                     KIFSNIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS
                     FSDPVFVNGVEDKDKSRRIEIKFSIKNDNALKDVEKFFEFH"
     gene            complement(16414..17856)
                     /locus_tag="RJ239_000281"
     CDS             complement(16414..17856)
                     /locus_tag="RJ239_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HDV7330437.1"
                     /translation="MDIKSDEISELVLPEGKDARGSLVYFKIIFIPAFLYILILLGYF
                     NVIDFKVELHTVIMTGVIFFTALIFARHSAEYAYSIFEQQKDEFKQALKRHIMRHFLA
                     IGKDTKSNANFDDFAYTYIKGARNENFASIGSAIFPMMGILGTFISIAFSMPNFSSSD
                     TAALEQEIADLLSGVGTAFYVSIYGIFLALWWMFFEKYGKSKIDRLLNRQKNATSGFF
                     WTKEELDQRYLTESLQHFEKIGAIFKQVSNDDFFAELDHAIDRKFGIFQDMLNVEEKA
                     IRLSSEHIKQTMGELSKAQRDQRDLGKLYSEMLNGIGLLNQNLKEINTRMSEQYNRLL
                     DISSDKIHHLDKTLSAFDEKIERFGKNFELYEKAMLESQEKVFEGFKASLFEGMHKFK
                     EVYEEEKSIDAKIKMMDELKKEMKALDEETSQMMSKLSGDENQNKENETKQIEDFSES
                     KTEENQDEIQAEISKQESNDELKNEDKENK"
     gene            complement(17951..19015)
                     /gene="fbaA"
                     /locus_tag="RJ239_000282"
     CDS             complement(17951..19015)
                     /gene="fbaA"
                     /locus_tag="RJ239_000282"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HDV7330438.1"
                     /translation="MGVLDIVKAGVISGDELNKIYDYAKAEGFAIPAVNVVGTDSINA
                     VLEAAKKVNSPVIIQFSNGGAKFYAGKNCPNGEVLGAISGAKHVHLLAKAYGVPVILH
                     TDHAARKLLPWIDGLIEANAQYKKTHGQALFSSHMLDLSEESLEENLSTCEVYLQKLD
                     ALGVALEIELGCTGGEEDGVDNTGIDNSKLYTQPEDVALAYERLGKISDKFSIAASFG
                     NVHGVYKPGNVSLQPEILKNSQKFVKDKFALNSDKPINFVFHGGSGSELKDIKNAVSY
                     GVIKMNIDTDTQWAFWDGVREYELKNRAYLQGQIGNPEGDDKPNKKYYDPRVWLRSGE
                     ESMIKRLEIAFEDLNCINKN"
     gene            complement(19015..19836)
                     /gene="peb4"
                     /locus_tag="RJ239_000283"
     CDS             complement(19015..19836)
                     /gene="peb4"
                     /locus_tag="RJ239_000283"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase PEB4"
                     /protein_id="HDV7330439.1"
                     /translation="MKKFSLVAATLIAGVVLNVNAATVATVNGKSISDTEVSEFFAPM
                     LRGQDFKTLPDNQKKALIQQYIMQDLILQDAKKQNLEKDPLYTKELDRAKDAILVNVY
                     QEKILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKGLKGK
                     ELDAKFSELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTTPVKTN
                     FGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEYK"
     gene            19917..20543
                     /gene="nth"
                     /locus_tag="RJ239_000284"
     CDS             19917..20543
                     /gene="nth"
                     /locus_tag="RJ239_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HDV7330440.1"
                     /translation="MKRNLEIKELFLKHFDKPVTELKFSNLYELLVCVMLSAQCTDKR
                     VNLITPDLFKAYPDIKSLANANLSSLKTYIQTCSFFNNKAQNLIKMAKAVCENFDGEI
                     PLDEQNLKSLAGVGQKTAHVVLIEWCGANFMAVDTHVFRVSHRLGLSKAKTPEATEED
                     LTRTFKDNLNYLHQAMVLFGRYTCKAKKPLCKECFLNHLCKSKDKELK"
     gene            20540..21190
                     /locus_tag="RJ239_000285"
     CDS             20540..21190
                     /locus_tag="RJ239_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HDV7330441.1"
                     /translation="MKIFIFLLTISLNIFALEPYKPSADFSSYFNNINCSQILDKFFY
                     LNCYDYKLKGTKAVAYKVEASNLKDRQIKKRPRFEDDTNIPKKYRTTWSNYKNSGYTR
                     GHTAPNASFSFSKAAQNSVFLMSNITPQNAQINNKIWNEIEQRERNLALEFQSIEVLN
                     LVLYDKEPQYIKNRIAIPSFYVKIIKTPKFKECYQAPNHEVNDENIKQYQINCDKF"
     gene            21201..21833
                     /locus_tag="RJ239_000286"
     CDS             21201..21833
                     /locus_tag="RJ239_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HDV7330442.1"
                     /translation="MEINALTITTLYIIGISAEGMTGALAAGRHKMDLFGVIFIALVT
                     AIGGGSIRDVLLGHYPLTWVKHPEYIILICFCALVATKIPRVVTKLETLFLTLDAIGL
                     VVFSILGAQIAIDQNHGFIIAVAAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAII
                     AGAIYYSLIIWLELNALVCTLLTLFIGVFARLLAIKYQWSLPIFSYNEEK"
     gene            21891..22325
                     /locus_tag="RJ239_000287"
     CDS             21891..22325
                     /locus_tag="RJ239_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HDV7330443.1"
                     /translation="MRRLSILLAILIVINITACDSKTENYYKNLPSEAKEKAKECKES
                     GTLSEDCINALKVGVKPTNEEGKYSPNTPKKSDNQILEALKQNDLKKEKTTKDINQSS
                     ENNESIIIPPIAETPSEIYPSKTTENNQSSIFSDDVNMTQEK"
     gene            22322..22543
                     /locus_tag="RJ239_000288"
     CDS             22322..22543
                     /locus_tag="RJ239_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HDV7330444.1"
                     /translation="MTMKITLFLSLIGIFFAACEQTKSVEYYQNHPEEAKKRSLECRH
                     KAIISQDCVNAYKIGFPKDEWEDENISNP"
     gene            complement(22533..23243)
                     /gene="cmoA"
                     /locus_tag="RJ239_000289"
     CDS             complement(22533..23243)
                     /gene="cmoA"
                     /locus_tag="RJ239_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HDV7330445.1"
                     /translation="MMKDELFKQSPKKQFEFDKSVASVFDDMINRSVPFYRENLELCG
                     NLLAKILPTNASVCDLGCSSANFLIFLANLRKDFKLFGVDNSASMLEVAKSKAKAYGL
                     DISFFEANLCEFDFFTCDVFVANYTMQFIRPPKRQELLDQIYKNLNSKGILIMSEKIL
                     YEDAFLSKNIIELYADYKEKQGYSKFEIAAKREALENVLIPYSQKENLNMLEKAGFKK
                     IESIFKWANFETFIAFKD"
     gene            complement(23230..24084)
                     /locus_tag="RJ239_000290"
     CDS             complement(23230..24084)
                     /locus_tag="RJ239_000290"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HDV7330446.1"
                     /translation="MLNIFTTISKINITSLAIGCFDGMHLGHLKLVKCLDENGALLVI
                     NKFKGQFLCSNRQKEEISGKKVIEVDFESIKSLDGRDFLSFLKKEFVNLKFIVVGYDF
                     SFGKNRAYNAKDIESLSGIKTIIVDEFSIDGIGVHASLIKDFLSKANLQKAKEFLGRD
                     YSIKGKMIKGQGLGSKELFATINLDCEGYFLPQNGVYVTLLKSQRKTYKSVSFLGVRS
                     SDENFAIESHILEELGENFTQGEFFELEFISFLRENQKFQDLKKLKNQIAKDIEQARE
                     LLRKNDER"
     gene            complement(24050..24811)
                     /locus_tag="RJ239_000291"
     CDS             complement(24050..24811)
                     /locus_tag="RJ239_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HDV7330447.1"
                     /translation="MRFDFFVSKRLNISRNKALELIENEEILLNGKSFKASFDVKNFL
                     ENLKKTQDLNPEDILLANELKLDLLSEIYVSRAALKLKKFLEENDIEIKHKNCLDIGS
                     STGGFVQILLENQALKITALDVGSNQLHPSLRVNEKIILHENTDLRAFKSEEKFELVT
                     CDVSFISLINLLYYIDNLALKEIILLFKPQFEVGKNIKRDKKGVLKDDKAILKARMDF
                     EKACAKLGWLLKNTQKSSIKGKEGNVEYFYYYIKN"
     gene            complement(24808..25812)
                     /locus_tag="RJ239_000292"
     CDS             complement(24808..25812)
                     /locus_tag="RJ239_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330448.1"
                     /translation="MSLLKNSSYILTLLSLFGFLLTWQRSAFSLFFLISIFLTLFWEF
                     FLFLKLRKNIIKEATLIKGSLFYRVSMGDFYLYIFSFFLAIFGLVSLFLNFLNLEKID
                     FVFIFIILPLLMIFLKKELHLQFVDNAYNDFRIVVIASFFTALFYAFYGLFFTYNELL
                     NLELFSRKIIAYKSASFVYFDFLSEFLHFVSNLKFFIFSYFGYLGFRALNFIFDFFNF
                     FMFCSLLAFVFNFVLKIKIKIIVLFLCFIMVLGNYFLKEQRNNALKSEQEQILLWMNN
                     FNFLKDNNLSLIQKEKDLFEKDLKDLREIFKKNAFEIGIWWFSKEKEDLEKRINESLK
                     "
     gene            complement(25793..27736)
                     /gene="ligA"
                     /locus_tag="RJ239_000293"
     CDS             complement(25793..27736)
                     /gene="ligA"
                     /locus_tag="RJ239_000293"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HDV7330449.1"
                     /translation="MKKEEYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELRVFE
                     EQNKDEISKDSPTQKIAPTIQSEFKKIAHLKRMWSMEDVFDESELRAWAKRAKCEKNF
                     FIEPKFDGASLNLLYENGKLVSGATRGDGEVGEDITLNVFEIENIPKNIAYKERIEIR
                     GEVVILKDDFEKINEKRALLNQSLFANPRNAASGSLRQLDTSITKERNLKFYPWGVGE
                     NTLNFTKHSEVMQFIRELGFLKDDFVRLCANLDEVLKAYDELLALREKKPMMMDGMVV
                     RVDDLALCEELGYTVKFPKFMAAFKFPALEKTTRLIGVNLQVGRSGVITPVAVLEPVN
                     LDGVVVKSATLHNFDEIARLDVKINDFVSVIRSGDVIPKITKVFKERREGLEMEISRP
                     KLCPTCQSELLDEGTLIKCQNIDCEDRLVNSIIHFVSKKCLNIDGLGENIVELLYKHK
                     KITTLESIFHLKFNDFEGLEGFKEKKINNLLNAIEQARECELFRFITALGIEHIGEVA
                     AKKLSLSFGKEWYKQSFEAYANLEGFGEQMALSLCEFTRVNRTRIDEFYKLLNLKIEK
                     LEIKSDGVIFGKTFVITGTLSRPRDEFKALIEKLGGKVSGSVSKKTDYVLFGEEAGSK
                     LSKAKELEVKCIDESAFNELVKE"
     gene            complement(27737..28879)
                     /gene="folP"
                     /locus_tag="RJ239_000294"
     CDS             complement(27737..28879)
                     /gene="folP"
                     /locus_tag="RJ239_000294"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HDV7330450.1"
                     /translation="MKFFKINPNTDFNLLCSFINPHKMGQKIMSEKTKIHFIFIKDIS
                     TPAANILKQDALRVGAELITHKEVITAKITHSNALLMASKEQIQKLVVKEKLQDFGLK
                     NLALFLQKDFLKPKKAELMAVINVNEDSFNAKSRVSEEDFEKRLNDFLALKPEYIDIG
                     AVSSRPGSEYCGKEEEFKRLKKVLDLIYEKNYYEQAIFSLDSFDEYCLEYALNKGFKL
                     INDITSLRNLNLAKLASKYGAKYCLMHMQNNPNNMQDNPFYEDLLDEMTLFFKEKLEL
                     LESFGVKESILDVGIGFGKSAGHNMILIKHLEHFLQFNKPLLIGASRKSVINAYFQSE
                     IKDRLAGTLYLHLKAFENGASIIRVHDLYEHKQLFALAQAMDNIGV"
     gene            complement(28881..29480)
                     /locus_tag="RJ239_000295"
     CDS             complement(28881..29480)
                     /locus_tag="RJ239_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HDV7330451.1"
                     /translation="MFISKIIISEDFLGIKEEMINNFGIKKLRFFIPQNEFLLDDARA
                     VEKESYIAETEEKIIVLMADSYRIEAQNFLLKLLEEPPKNIKFLIVIPSKNLLLPTIK
                     SRLICEKRKVEKEVKKLDLDLKRMDLRMLFDFLQKNENLDKNELMDQIALLAKECVKY
                     KDFNAEELEFFYESYELAKLNSKSGVLLATLLLNYYTKK"
     gene            complement(29486..30022)
                     /locus_tag="RJ239_000296"
     CDS             complement(29486..30022)
                     /locus_tag="RJ239_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HobA family DNA replication regulator"
                     /protein_id="HDV7330452.1"
                     /translation="MSDFLSFTLENIRNGGAFMAWLESRRLEWAPLMAARLKYLLEGR
                     TFVLMCDEQRSWYEEYFLKNINSKATRPMLPFVSLNSLCKKKVQSSEDIALLNDLLDI
                     SFPNGYVYFYIGSASDNKSLIAKSRDDSLLWLFDEQLQDSFYLNSKDKDLDIKLISLY
                     QLFDVSLDAILFSKVQLG"
     gene            complement(30023..31225)
                     /locus_tag="RJ239_000297"
     CDS             complement(30023..31225)
                     /locus_tag="RJ239_000297"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HDV7330453.1"
                     /translation="MLIVQKYGGTSVGTLERIEAVANRVIQSAQQGNQLVVVVSAMSG
                     VTNTLIEQAEYFSKTPNGKDMDMLLSSGERVTSALLSIALNEKGCPAISFSGRKAGII
                     TDSVFTKARIHHIDTKAIKSELQNGKIVVIAGFQGVDEEGNVTTLGRGGSDLSAVAVA
                     GALNADLCEIYTDVDGVYTTDPRIEPKAKKLDKISYEEMLELASLGAKVLQNRSVELA
                     KKLNVNLVTRSSFNNNEGTMITKEDGMEQALVSGIALDKNQARVTLRNIEDKPGIAAE
                     IFSVLANENINVDMIIQNVGVDGATNLGFTVPQNELELAKNAMQKILSSKTTIESDSA
                     VVKVSIVGVGMKSHSGVASKAFKALADEGINIGMISTSEIKISMIVHEKYGELAVRAL
                     HECYGLDK"
     gene            complement(31227..31697)
                     /locus_tag="RJ239_000298"
     CDS             complement(31227..31697)
                     /locus_tag="RJ239_000298"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HDV7330454.1"
                     /translation="MENEKNYRPNVAAIVLSSSYPFECKIFIARRSDMDNIWQFPQGG
                     IDKGESVKNALFRELKEEIGTDEVEIIAEYPEWLSYDFPSKIVKKMYPYDGQIQKYFL
                     VRLKHGATININTKHPEFDDYQFVSVKQIFEMINHFKKNIYVRVIKYFEEKGYI"
     gene            31799..32866
                     /locus_tag="RJ239_000299"
     CDS             31799..32866
                     /locus_tag="RJ239_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HDV7330455.1"
                     /translation="MHFYIHIPFCESKCNYCAFTSLKKNDYEKAYFKALKEDIVFQLK
                     QFNIQSNQIKTLFIGGGTPSCVNAYNYEDIFKILYPLLDKNVEISCEANPNSATLNWL
                     KNMKNLGVNRISFGVQSFHPKKLHFLGRIHNQEMIIKTLENANKVGFKNINLDLIYDT
                     KLDNKKMLEFELLHLKQIKDLITHLSAYNLTIESNTAFAKKEHFKKNAPNLMKFFIKQ
                     LLELDFFQYEISNFSKTKAQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKN
                     YIENPTFRSIEQLSSKDLNLEHLFLGLRSIVGIDETKLNQWQKDKINILLKEKKLFYK
                     NKRYFNPNFLISDELALYLSS"
     gene            32924..33340
                     /gene="tatB"
                     /locus_tag="RJ239_000300"
     CDS             32924..33340
                     /gene="tatB"
                     /locus_tag="RJ239_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HDV7330456.1"
                     /translation="MSFGEIIVILVVAILVLGPDKLPEAIVQIAKILKAVKRNIDDAK
                     SSIEKEIRINDLKEEAKKYKDEFSSTNENIRKKLSFEEFDDLKRDILDKTKVDLTFDS
                     RDDKVKNNLSGQNLNTEEKPNLSKLETQDKNGKINV"
     gene            33333..34070
                     /gene="tatC"
                     /locus_tag="RJ239_000301"
     CDS             33333..34070
                     /gene="tatC"
                     /locus_tag="RJ239_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HDV7330457.1"
                     /translation="MFEELRPHLIELRKRLFISVACIVVMFIVCFALRSYILDILKAP
                     LIAVLPEVAKHVNVIEVQEALFTAMKVSFFAAFIFSLPVIFWQFWKFVAPGLYDNEKR
                     LVVPFVSFASIMFAFGACFCYFVVVPLAFKFLINFGLNEDFNPVITIGTYVDFFTKVV
                     VAFGLAFEMPVIAFFFAKIGLIDDSFLKRHFRIAVLVIFVFSAFMTPPDVLSQFLMAG
                     PLCGLYGLSILIVQKVNPAPKDKESDE"
     gene            34063..35091
                     /gene="queA"
                     /locus_tag="RJ239_000302"
     CDS             34063..35091
                     /gene="queA"
                     /locus_tag="RJ239_000302"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HDV7330458.1"
                     /translation="MNKDLLLSSYDYTLANELIANYPTNPKEDARLLVFDRKNKEIFH
                     TTFKNLQDFLPNCAIFFNDTKVIKARIYGNKASGGKIELFLHQPFLNSHNPLFLAQIK
                     GRIKKDEILYFKEDLKVRVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPP
                     YIKREDEKSDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKHEIYHLTLHVGAG
                     TFKSVECENIQEHKMHSEFFNIPQQACEIIDSKQAILGVGTTVTRTIEYYTRTKTKNG
                     FCDLFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYS
                     YGDAMLIL"
     gene            complement(35080..36045)
                     /gene="lpxD"
                     /locus_tag="RJ239_000303"
     CDS             complement(35080..36045)
                     /gene="lpxD"
                     /locus_tag="RJ239_000303"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HDV7330459.1"
                     /translation="MKLSEIAEFLSLEYKGEDIEISALNSLLKANFTELTYCDGEKNT
                     KDIPHTGAAAILVSKEYENLVPKDTKALITQSPHLSFAFLSKLFAKPLISTAKEKVQN
                     IAKSARIMPNVYIGDNVNIGENVIIMAGAYIGDNVSIGDESIIHPNVVIYNDTKIGKK
                     CHLLANCVIGSDGFGYAHNKNGEHYKIYHNGNVVLEDFVEVGACTTIDRAVFDSTIIK
                     AGTKVDNLVQIGHNCNIGQNCIIVAQTGISGSSELGRNVIMGGQSATSGHLKIGDFST
                     IAARGGVSKNLEGGRVYGGFPIMLQKDWLKLQAKIAINFKEKSQD"
     gene            complement(36042..36506)
                     /gene="ilvN"
                     /locus_tag="RJ239_000304"
     CDS             complement(36042..36506)
                     /gene="ilvN"
                     /locus_tag="RJ239_000304"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HDV7330460.1"
                     /translation="MRRVLSVIVLNEHGVLSRIVGLFSGRGYNIDSLTVAPLENKEFS
                     RINIVTSGNERTFEQIVKQLHKLIPTYKVIESEEFIDKEMALVKIPLNENLGGLDAVL
                     KAYNGTIANSNENFLFLMVADDANRIDNFLKTIKKYNPSDIVRSGSVLMEIK"
     gene            complement(36503..38203)
                     /locus_tag="RJ239_000305"
     CDS             complement(36503..38203)
                     /locus_tag="RJ239_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HDV7330461.1"
                     /translation="MKELSGSAMICEALKEENVKIVFGYPGGAALNIYDEIYNQKYFK
                     HILVRHEQAALHAADAYARMSGEVGVAIVTSGPGFTNTITGLATAYSDSIPLVLISGQ
                     VANSLIGTDAFQEIDAVGISRPCVKHNYLVTCIEEFPRILKEAFYIARSGRPGPVHID
                     VPKDVSATLGLWEYSKEISMKTYKPVYKGNSKQIKKFAELLKEAKRPLFYLGGGCISS
                     NASEQIRELIKFTKIPAVETLMALGTLRSDDVFNLKMAGMHGSYAANMALSECDLLVS
                     VGARFDDRITGKTSEFAKHATIVHVDIDPSSISKIINAHYPIVGDIKEVLKELLEELK
                     KENFNTTFKEWHETLKRYNELYPLSYEDSNEILKPQWVIEECAKMAPDARIITDVGQH
                     QMWVAQFYPFNYPRQLATSGGQGTMGYSLPAALGAKLAVGEEVVINFVGDGSVLMNIQ
                     ELMTAYEYGIKAINIILNNAFLGMVRQWQSMFYKEHFSQTDLSTQPDFIKIAQGFGCE
                     GYEISNKEEFIQAFSQALKSDKTSLLNVKIDRFEDVLPMVPAGGAIYNMILPKAKDRQ
                     "
     gene            complement(38221..38664)
                     /locus_tag="RJ239_000306"
     CDS             complement(38221..38664)
                     /locus_tag="RJ239_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HDV7330462.1"
                     /translation="MTLKEQILNDIKEAMKQKDDFKRDSLRTLNAAFKQIEVDERIEL
                     DNERIYKIIASEIKKRKDVIELYLKANREDLAQKEQNEISLFEIYLPKQLSDEELTLA
                     LKQLIEELGVSSLKEQGLVMKEAKIKLGASVDGKRLNLALKELLQ"
     gene            complement(38676..39695)
                     /locus_tag="RJ239_000307"
     CDS             complement(38676..39695)
                     /locus_tag="RJ239_000307"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3,4-dihydroxy-2-butanone
                     4-phosphate synthase/GTP cyclohydrolase II"
                     /protein_id="HDV7330463.1"
                     /translation="MKFVSVEQAIKDLQAGKMLVMVDAEDRENEGDLIFPAQFSTQEK
                     VNFMIKEARGVVCVALDETLAKKFELPLMVPKNTSNHETAFTITVDAKDATTGVSAYE
                     RNMTIQIFADDNAKASDFVRPGHINPLIAKKGGVLERTGHTEGTVDLCKLAGLKGACV
                     ICEIVKDNGDMARREDLEIFCQKHDLNMIAVSDLIEYRLKHESLIKLEEKSQSVLAGF
                     KAEKFIFSDHNQTQHIAFCFKDIKKCENVKFHISGSDFELLTSDKFSKLLEQIKFLSE
                     NGGVIVFMQGEKSSTTQYKNYGIGAQILRYFGIEEIKLLSQSCDKDYIGLEGFGLNLK
                     ACNFN"
     gene            39788..39862
                     /locus_tag="RJ239_000308"
     tRNA            39788..39862
                     /locus_tag="RJ239_000308"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:39820..39822,aa:Gln,seq:ttg)
     gene            39896..39971
                     /locus_tag="RJ239_000309"
     tRNA            39896..39971
                     /locus_tag="RJ239_000309"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:39929..39931,aa:Met,seq:cat)
     gene            complement(39993..40865)
                     /locus_tag="RJ239_000310"
     CDS             complement(39993..40865)
                     /locus_tag="RJ239_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HDV7330464.1"
                     /translation="MKEYDKLSIRLVQILSKFNNGESLSAQELAQEFNVDTRTIQRDL
                     NERLTFMPIKKENGRYVLESFALGKLSFKDIQNFATLSGIAELYPKLDQGFIVDLLSH
                     RVNKVLMVKNEGFQKVDYELFKDLSVAILKHNVLNFFYKEKERQIKPYKLVNYKGIWY
                     LLGDENDKLKHFNLDKISKLRTKNENFIPNEKLEEQIQNDPNIWLGESKEVILKLDKN
                     AKEYFFRKEILSNYQIIDKDETSYTLSTQVSYEDEILHLVKQWIPYIKILAPIELKIR
                     LEDILKSYLNNLSK"
     gene            complement(40862..41929)
                     /locus_tag="RJ239_000311"
     CDS             complement(40862..41929)
                     /locus_tag="RJ239_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7330465.1"
                     /translation="MNHLLILYNPYYQEDVIKQHLSILQEKSQVAFGKIKSKLNDQEK
                     QNSLEEIYQSTNEENFLQLFLSDYANLFVAKVVKISKNVDESLIPSYYKEKNLEVEDF
                     FIISDLRELVREDFSRLRDKFLANFITPNDHTYAIYGNHYTYPLPVRLKEECSYFLGD
                     EKHYLSVYKSKEYLAMQENFIRFVFGKRIFYLLHSDSISNIIHAELELLQSENDLLND
                     FTSIIVKYSKTLEYEIYAFAKKVLLKACMKDPSLYDLAYNVQGKSFILKDFFTQKPNL
                     GSIKFLLRHENIQCHLGKSLTQFINYPFSKSLTIIQEIRNEAVHAKAPSLNEVKKLRN
                     EILGIEGVSLLKRILTHKEIS"
     gene            complement(41938..42807)
                     /locus_tag="RJ239_000312"
     CDS             complement(41938..42807)
                     /locus_tag="RJ239_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330466.1"
                     /translation="MENKFKINYDQTTTNGRNGTNGKVDNLSMKNHHLKSIGHSPDIF
                     GLFVSIVNQFTNTSTFVSNGKIITIDTNTFELQGGNFIAKIFCGFFNWFGHLASDWCG
                     SSGGKERGAGIPMPFYNLFLLCDFGNFGQHRQTLAQIATQVFEQGYDLRHGVTMSIPV
                     MINKMLIRFMYIIKAKFYHKKEWKECIPKDNIPELNKMLLIGSGTFLLIDTGGAWIKS
                     KNPITNPVVFLSEINLINVIRFSTLILKEIYILYNNGKIDNKKLEKYLDDTCKILLIE
                     AHNKSKPFKEILK"
     gene            complement(42813..43094)
                     /locus_tag="RJ239_000313"
     CDS             complement(42813..43094)
                     /locus_tag="RJ239_000313"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330467.1"
                     /translation="MITYSNLSDVKKRIEDEFTHRNAECDKYDYLIAITCGAIAGIMD
                     IFLVGNPKDSYLGKKVDKTVEKMTQKFAQLCGWDKQKALDKNKDLTKSV"
     gene            complement(43420..43884)
                     /locus_tag="RJ239_000314"
     CDS             complement(43420..43884)
                     /locus_tag="RJ239_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330468.1"
                     /translation="MSVSIMELLGFGELIKLPLIDSSKKYHNKNKQQLRLFIIQEILK
                     ENQKTITQIIDIINNLIEQCNTNTQNLQELIKLLKLASKNNETFKEREKLLYCPETLS
                     LITINNHLKEDDIQFIEQYYTYNQNTHKYERNDNLSSSDLEKLSNFFKLKNL"
BASE COUNT        14946 a         7602 c         5619 g        16081 t
ORIGIN      
        1 ttaaatttta ataaggagat aagaatgctt tctaaagaag ttgtaaaatt actcaatgaa
       61 caaataaaca aagaaatgta tgcagcaaac ttatatctta gtatgagttc ttggtgctat
      121 gaaaacagtc ttgatggagc tggagccttc ttgtttgcac atgcaagcga agaaagtgat
      181 catgctaaaa agcttatcac ttatcttaat gaaacagatt ctcatgtaga gcttcaagaa
      241 gtaaaacagc ctgaacaaaa tttcaaatct ttacttgatg tttttgaaaa aacctatgaa
      301 catgagcaat ttatcacaaa atcaatcaat actttagttg aacacatgct aacacataaa
      361 gactattcta cttttaattt cttacagtgg tatgtaagcg aacaacacga agaagaagca
      421 cttttccgcg gtatagttga caagattaag ttaattggag aacacggaaa tggactttat
      481 ttagctgatc aatacatcaa aaatattgca ttaagcagaa aaaaataatc tttgccctac
      541 tatgggcaaa tctcgctttg gattgaaggt atgacttatt tttctctaga atttagtatt
      601 ttaatgatag ctttttttgc tatttattgg acttttaaaa atgattacaa aatacaaaat
      661 attttaattt taattttctc ttatattatt tatattttaa tcaatcctta tttcgcctta
      721 gttttattta tatatacctt ttttatacac tattttgcct tgctaatttt tgtgcgtcgc
      781 aagcgttata ttttcgctac ttgcatggct tttattattt taaatttatg tttttttaaa
      841 tactttccta gcatcaaagg aagtgttgat gagatattaa attttttcgg tttagaattt
      901 ttaaatattg atttagtatt accaatagga attagttttt atacctttac ttctattact
      961 tatcttgtag aagtttatca aaaacgccgt ttagaaagtt ttttaaattt agcaaccttc
     1021 ttatcatttt ttccaacact actttcaggg cctattatgc gaagttcttt tttctttgaa
     1081 caggcctatc aaaaacgcga atttaaacat gcaaatttaa tcatcatctt gcttgttttt
     1141 ggtatagtta aaaaagtttt aatagccaat taccttggaa tttatgctaa aagtatttta
     1201 gactttccac aatcttataa tttcatacaa cttttaagcg caatttacgc ctatgcaatt
     1261 caaatatact gcgattttag cggatatgtt gatttagttt gtgcttttgc tttaatgtta
     1321 ggttttaccc ttccgtctaa ctttaacatg ccttatcttg caaaaaacct aaaagatttt
     1381 tgggctagat ggcatatcag tctttcaacc tttataagag attatatcta tataccttta
     1441 gggggcaata gaaaaggaat gccacgcact atagttaaca tactcatcgc ttttatactt
     1501 tcaggtatgt ggcatggcaa tacacttgct tttattgttt ggggtttatt gcatggtatt
     1561 ggcatagttt ttatacattt gctagcttta agcaaattta gtttacaaaa aattccagct
     1621 ttaggaagat ttttaacctt tcaatttgta tgttttactt ggattttctt ttactatagc
     1681 aaaaatctag aagatgcaat agaatatttt aaagcttgtt attataattt cttccaaatt
     1741 ccatcttata acgatatcta tatgttggtt gcttttgggg ttctttttat gatctatcct
     1801 ttatttatta attttaaaga atattgcatt aagattttaa atcttactcc atttttgcta
     1861 aaacctttta ttatagcttt tattttactt ttggtttttg cttttatgcc agatggaatt
     1921 cctgatttta tttattcgag tttttagatg agtgtagtta gatttttctt cattttgatt
     1981 atagtgcttg gcttggttgt tgtagttatg aatcagagca ttagctctta tatagaacaa
     2041 aaatatcatt ttgcattcta tcctcataat gatcttttaa aagaagccaa tggcttcaaa
     2101 attaaattag aacaaattcg tgcaatttta agcaacgaac ccttgcttca aaccaatgaa
     2161 gaaactacaa atcaagaaag taaatcaaca gatgaaaact taagtaaaat agataaagtt
     2221 ctaaacactt tagaaaatga tgaaaacact tctcataaag aaacaaatct aaccttaatc
     2281 caagatgcaa atattagttt tatcgacaat accaaattag agctacaaaa tggagatgag
     2341 tttttattta tcggagattc tttaatgcaa ggtgttgcaa tagccttaaa tagagattta
     2401 agaaatttaa atcttaaggt aaccgatctt agtaaacaaa atacaggcct ttcttataaa
     2461 tcctattttg actggtcaaa agccactaat gaagctttta ttaaaaactc aaatattaaa
     2521 tatcttgttg ttcttcttgg cgctaatgat ccttgggata ttaaaaaagg aggaaattac
     2581 catcgttttg gctccctttc ttggatagat atttacacaa gtcgtgtaga tgaaatcatt
     2641 aaaatcgcta aaaaacataa agccaaagtt ttttggtttg aaatccctcc tgtaaaaaaa
     2701 gaagatttga acaaaaaaat acaagtgctc aataaaattt acagcgatga aattcttaaa
     2761 aataaagaaa tttttatcaa cactaagcta ttttttagtg tcaatgatga atactcagct
     2821 tatataaaag atgaaaacaa tagaagtata aaagtaagaa cagatgatgg ggttcatttt
     2881 actccaagtg gcgcaagaga aatgtctaaa cttttattag aacacataaa acttaaggaa
     2941 gaaaatgcta gtaaataaat ttaaaattat cttattgttt tttattattt ttactagctc
     3001 ttatgcacaa aatttaaata caaatgacac aatagattcc atactcaatc aaaacaaaaa
     3061 tcactctgct ttaacaagtt atgtattaaa aaaagatctt aaaaatctag aaaaaaaatt
     3121 agaaaaaaat caaaacatag gaattagaat ttatggagat tctcatatgg cggctgattt
     3181 ctttccgcgt gtcataagag gatatttaat ccgctctaac tctataggtt ttgcctatcc
     3241 tttacagccc aaatatcaac aaaatcttaa tcttgtttat tcttataaaa actttgaaat
     3301 tttaaactca agaaatcctg ctaatgctgg acataatttt ccattaggtg ggataatagc
     3361 caaagcaaaa atcaaaggcg caaaaatcaa ccttgataca accttagata aaaaaaaatt
     3421 caagatagga tttttattta aagccaaaca aaataccaat gcttttagca tcaaagatgc
     3481 aaaaaaccaa agctatgagt taagaactac acaaattaac aaatggtctt ataaagaact
     3541 agaacttgat cttcctttgc aaatttcagc cttacaaaaa gatgctgagc taggaggata
     3601 tttcatcaca aataaagata ataatgtttt cttagatacc attgcaatca atggtgccaa
     3661 aagtgattta tggctctctt ggaatcaaac agttgtaaaa aaagaactag gacttttaca
     3721 caatgattta attattcttg cctatggttc taatgatgca ctctttaaag ggtttgaaaa
     3781 acaaaaattt aaaaacaatt taaaaaaatg gattagtatt ttaaaaactt acaataaaaa
     3841 cgctgttatc atgctaatct ctccaccaac cgtagttcaa aaacaaggta aaaactacaa
     3901 gcttgctcct gattttttta ccatacgcaa agcattatat gaagttgcta aagaagaaaa
     3961 aactcttatc tttgatatgc atcagtttat gcaagatagt gggggaaaaa acaaatggat
     4021 agaacaaaag ctttcgctca atgatgtaca tcttactata aaaggctatg agctaatggc
     4081 taaaaagtta ctcgaggatt taaaaaatat catcgattat taaatttaat acttaggaaa
     4141 ttctaagttt ttatcattaa aacttaaagc tgtgatttga tagtaagaat taatggtttt
     4201 taaaagatta aatctagctc ttaaaaattc ttgctgggta gaatttaaag tattgtttgc
     4261 atccaaataa tcttttaatt cgctttttcc taaaatatat ttttcataat acgccttagt
     4321 gataagctct tgtttaatgt taatattttg caaattttgc aagagcaagg tatcgctttg
     4381 ataatcttta taattcaatg caaattcatt catcgcgctt tgcaagactt gctcataaga
     4441 aattaaaagt tgctcataag caaattgtga aattttgata ttttgcttta ccctaccata
     4501 atctaagaaa ggtaaagaaa tcttaacatt accacttaaa atttcaaatt taaaactatc
     4561 atcaattttt ttatcactcc cacttaatgc tccacctaaa gaaatactag gcaaaataga
     4621 tttttgcata gaagaataat ccttaaaggc tgattttaag ctattgagtt tagatctcac
     4681 atctgcacgg tacgctaaag cttttaaagg tatattaaaa tcaggactta aggttttaaa
     4741 atcatttaaa gataaagttt taaaatactc tatataagca aaaccttctt gccttgccaa
     4801 taaatcttgt aaatttttta tgagtaaatt acgattttga tcattgctta ataaattttg
     4861 tttagctctt aataagcttt gttctatgtt taaaagatct aattcttcta tttttccaag
     4921 cttgtattta tagttataaa gctctttcat ttgttctaaa tttgaaagat aagctcgaag
     4981 caatttatct acatcgttaa aataagccag ctcaaacaca tcatttaaag ctgtattgat
     5041 catacttatt tttaaatttt caagatcata agcacttgct tttgcactaa attcactcgc
     5101 acttgcacta tctcttaatt taccataaat atcaagctca tagcttaaat ttaaagaatt
     5161 attgaaattt ttactttgtt tgcctgaatt taaatcttta tccgcaccaa aacccaaatt
     5221 tccacttaaa gtcggatata aatcataatc aatcaaatca gctctagcca aagccgaaag
     5281 caaagttttt ctagcaatat taatatcact attattcaat aaaacaaaat ttagaaattc
     5341 atttaatttt gcattatcat aagatctata ccaatcataa gtaagattta aatctttcat
     5401 ttgttcttga gttaaatcaa cttctttagg caagctaagt tttacaccac aagcgctcaa
     5461 gaaaaatgct aaaaaaatgc taagtattat tttcatttta ttcctttgat aatgcactaa
     5521 taggatttaa atttgctgca tttcttgcag ggaaaaaacc aaaaaccaca ccgataaaca
     5581 tagaacttaa aagtcccaaa agcacagaat aggcatttaa aatcatagga aaatccgtac
     5641 ttaaagtatt aaaagcaaaa ataacaaaaa tcgataaaat cacacctaaa atcgccccta
     5701 tagtacaaat cataaccgct tcgattaaaa actgcatcat aatatcttct cttctagccc
     5761 ctatagccat gcgtatgcct atttctcttg ttctttcact tacagaaaca agcatgatat
     5821 tcatcactcc tataccccca acaatcaaag caatcacagc cacacaagcg gtaagtatgg
     5881 ttgtagtgcg tttatttgct gtaatagctt gcttaaaagt gtcagaatta aaagtaaaaa
     5941 aatccttttg tccgcgttta atttctaaaa ttcttataat agcattttca gccaaagttg
     6001 aactcacatc atctttaacc ttaactatga tttcacgcaa atttctatct cctgtaagct
     6061 tattcatcag tgttgtatag ggtatataaa aacgtactac attatcttct ataggcttgt
     6121 ctgtatcttt ttgcaaaact cctataatct taaaaggttg agaattaaaa agcaccacac
     6181 gacctaaaat attttcactt ttttcatcag gaaaaagatt ttttttagca ttaaaatcca
     6241 atacagcaac attggtacta ttttttacat catcattatt taaaattctt cccgcatcta
     6301 tccttaaacc ttctatagca aaattattta cccctactcc ttcagctctt gcgcttaaag
     6361 aaatattggt ataagttgcc actcctgaag tatttgaatg agcatcaact gcttctaaat
     6421 attctaaaga tcttaatgtt tctaaatcac taaaattaag ccttgtttta cccgaacgca
     6481 aatccccaaa tccttttcca gggcgaattt caatagtatt tgtcccaagt cttgcaatag
     6541 actcaagcac tttagcttga gagcctaatc ctaaagctac aacacaaact acagaagcaa
     6601 tacctatgat gattccaagc atagttaaaa tagaacgaag tttgtgtgca agtatggaag
     6661 aataagctat cttaaaacat tcaaaggctt gatttttaag caaagtaagt gtttttttct
     6721 ctttgggcat tgtttttaaa ataagttttt cttgagcttt ttccttttta gtatcgctta
     6781 aaatttctcc atctttaatc tctataaccc ttttagcttg tgctgcaatt tttggatcgt
     6841 gagttactaa gactatagta tgaccttgct cgttaagttt ttgtaaaatt tcaagcacca
     6901 taataccgct tttactatcc aaagctcccg ttggctcatc agccaaaata agctctccgc
     6961 cattgattaa agctcttgct atagaaacgc gttgttgctg ccctccgctt aattcgtttg
     7021 gcttagaatc taacttgtga gctaattcta aatcatttaa gagtttttta gcattttgac
     7081 ttctttcttg taaatttttt cccgcataaa ctgcaggtaa agaaacattt tctttagcac
     7141 tcagcaagct taaaagattg tatctttgaa atataaagcc tattttttca cgccttaatc
     7201 ttgctttttc atcattatta agtttagtga cttcatactc atcaaaaaca taagttccac
     7261 tacttggtgt atctaatgtt cctatgatat tcaaaagtga agttttacca cttccacttt
     7321 gtcctataat agcaacaaat tcaccttttt ctatacttaa acttacattt tttaaaatgg
     7381 cattttcgcc tatatttttg caaatatttt taagaaaaat cattaaaatc tcaacttcat
     7441 tttaggagct aaaccatcag cacttgagct tactatcaat tcttcatctt catttacacc
     7501 ttctaaaatt tgagtattga tagaatcttt aatgccaagt ttgacatatt ttttaacagc
     7561 tttttgattt tccaaaattt caacataata gccttttgga tcgcttttaa ttgcataagt
     7621 tggcactgct aaaacagcct ttgcacttgc tacgacaatt tcattttgta tactcatacc
     7681 aatacgcaaa aaatcatctt tattggctac ataaaatttt gcgtaataat aaatagcatt
     7741 tgatgagctt gagcttgaag aactcgaact tgatgagctt gagcttgtac tagaatcact
     7801 cacttcagta tcagctggat ctatacttgc aatcttagca tgataagttt tttgaggatc
     7861 attaagcaaa gaaaaatcaa gctctgttcc tacttttatc ttactcacat cagcctctgc
     7921 tatttccatt cttacttcca tttcgtctaa attagctata cggactatag taggagtgtt
     7981 ttgattagca ttaactgttt gtccttcatc tacagctaca ttaatcacaa caccatccat
     8041 aggagcagta atggttgtat aacctaaatc tttttgtgca tttttaagag tgatttcaag
     8101 ctgaactact tgagcattaa gctctgcaac attggctttt aaagtataat aattattttt
     8161 ttgagtttct aaattttcaa gagaacttgc tttagctgca taaagttttt gctctctttg
     8221 atattgctta ttcgcaatct caagggcaac ttttttactc tctaaattag ccttagcact
     8281 ttcaagctga gcttttgtaa tatctaaatc gttttgttgt ttatctttat caatttgagc
     8341 gatcaaatca ccttgcttta catgagttcc cacatcaaca taaagtttta taatttgtcc
     8401 actaacttga gcacccacat cgacttgatc tttggcatat acctttccta ctgcctctat
     8461 ggtttgagat atatcttttt tttgtatttt ttgagttaaa tagctgattt tttcatcatt
     8521 attaaaaaaa ataaaataag ccccaacact tccaagtatt gcaattaaaa tgattaaaac
     8581 aatcttcttt ttcataataa caaatcctaa agaaaaatca agattaaatt ttactcattt
     8641 tttgtgaatt ttttgtgaat ttttaattct attttataaa tttaaaaatt ctaaagccat
     8701 catcacatca ccctgcatta aaacttttaa attttcatca tcccaacaaa aagtagaact
     8761 atgatgcaaa gctggatgat ttaaatcctt tgaaattcca acaaatacat aagcccccat
     8821 tctttctcgt gttaaaaaag caaaatcttc agcccccatg tcaggtttag aagaaacaat
     8881 gatattttct tctcctaaga cctttgcaaa agcttttctt gctattaaaa cagctttttc
     8941 atcattaatc aatggaggaa attctttagt atatttaagc ttataatctc cgccattgga
     9001 ttttgctgta gcagcagcca cttcttctaa agaacttttt aaaatatctt gcgttttatc
     9061 atttaaaaag cgcacagttc cttttaaata agcatttgta ggaataacat tataagtagt
     9121 tcctgcacaa atttgaccta cggtaatcac ccctgcttca taaggggcta aacgtctaga
     9181 aataacactt tgtatattat ttacaaattg cgttgtcata attataggat ctatacaagt
     9241 gtgcggatga gctccatgcc ctcctctgcc aataaattcc aaatcaaaaa tatccgttcc
     9301 agccatcatt tcaccactta caatttgagc agtattttca agcaaaggcc cccataaatg
     9361 acaaccaaaa actgcatcaa cataaggatt ttccaataca cctgattcta tcataggttt
     9421 agctccaccg cttccctctt ctgcgggctg aaacataaat ttaatcgtgc cacaaaattc
     9481 atctttaagc tcatttaata tcaaagcagc tcccaaaagc cctgctgtat gtccatcatg
     9541 tccacatgca tgcatcttac catcaatttt tgaagcatag cttaaattag ttttttcttg
     9601 cacaggcaaa gcatccatat ccgctcttaa aagaacacat tttggttttt tctgactctt
     9661 cttttttcct tctataatag ctaaaattcc tgtttttgca atattttttt gatatttaat
     9721 gccaaactca tctaaaattt tacacactaa atgggctgta ttttcttctt caaattcaag
     9781 ctcaggatgc atatgaattt gatgtcttaa atcaactact ttatcatagt actttagtgc
     9841 taaattttca accagctttt gcattctttt ccttaatcta aatcttttat tttctcatct
     9901 gcttttttac tgtcaagttt ttccaaattc gcctccattt ttcgtatttc ttcttctcca
     9961 ctacgcacta attttgcatc aattttggaa aaatctccag tttttttatt tggatattct
    10021 accttagaaa gtataaaacg caataaattt aatcttgctt ttttcttatc atcagaagaa
    10081 ataatagtcc aaggacaagt tggagtatta gatgctaaaa gcatagagta tttagctaaa
    10141 gtatatttat cccataattc ttgcgatttt tgatccacag gagataattt atattgttta
    10201 agtggatcgc ttcggcgttt ttcaaaacgt ttttttgctc gtcttttgat actgaaaaat
    10261 aaaatttaaa aaaaataata tcactatttg aaatcatatt ttcaaacaaa ggcacttctc
    10321 ttaaaaaatc tttatgttgt tgcggtgtac aaaaacccat aaccggttct actcctgcac
    10381 gattatacca agatctgtca aaaatcacaa tctcaccggc tgagggcaaa tgtgctatat
    10441 aacgctgaaa ataccactgt gttttttcca catcactagg tttttcaaga gccacaacgc
    10501 ggcaaccacg cggatttaaa tgctcaatca aacgtttaat cgccccacct tttccagccg
    10561 catcacgccc ttctataagt ataagaacct ttaaaccctt ggctttaaca tgattttgaa
    10621 atttcaaaag ctcaatttgc aaattcttta aatctttttc atattctatt gtacttttct
    10681 ttcttttaac agaaacataa atttcattct ttttaacaac cgcttgcgct tttggagaat
    10741 tattttcttg tattttcaaa cctttataaa gtatttaaag taaatttacc ataataaatt
    10801 ataattgaag ttaaaaataa aggaaaaaat aagtttttag gaaatttatg cgtatttttg
    10861 gtattatttt attaagtttt tgtttatgtt ttgcttctat attatcttta aatgaagctt
    10921 ttaatgtaaa atcaaactct tataataact ctatctcaat tgatattgaa cttggaaaag
    10981 atatttatct ttattctaat aaacttaaat tatatataaa cgaaaaagat ataagttctt
    11041 tgattaatct acctcaaagt tctacaagag gtaatgaaaa tgtttattat caaaaattaa
    11101 atttagcttt gccaaattta ttactagagc gctttgcaaa aaataccaca aatttaatca
    11161 aactcgaatt tcaaggctgt tctgaacaag gcttgtgtta taatcctcaa acttggtact
    11221 ttgatctcat ttctaaaaaa gatgcttttg aaatttcaaa accttacaaa gctcaaaaaa
    11281 cagataaaaa aactaaaatt gaatctgaag aaagctctat agcaaatttt ttagcaacag
    11341 ataacttttt ttggattttg ctaagttttt ttggctatgg acttttactc tccttaacac
    11401 cttgtatttt acctatgatt ccgattttat cttctcttat cgtagcaaaa agtaatgcta
    11461 aattttcaaa aaaatatagt ttttttctct cttttatcta tgtttttttc atgtctttag
    11521 cctatgctat tgctggagtt atagcaagtt ttctaggagc aagtattcaa ggaattttac
    11581 aaaaacctat tattttaatt ctttttgctc taattttcat agcttttgct tttgctatgt
    11641 ttggagcttt tcgttttgaa ttgccattaa gatttcaaac ctttatacat aaaaaaagcg
    11701 aaaaagggaa gggagttgta ggtatagcca tcatgggatt tttatctgct ttaatagtag
    11761 gtccttgcgt agcagctcct ttagcaggtg ctttaattta tatagccaat acaggcaatg
    11821 ctttattagg tggtagtgca ctttttatca tgagttttgg catgggtata cctttgcttt
    11881 tcataggctt aggattaggt tttattaaac ctggtttttg gatggaaaaa gtaaaaattt
    11941 tctttggttt tgttatgttg gctatggcta tttggatact ttctagaatt attgaagaaa
    12001 attacatttt aattgcctat ggaattttag gtgtattttt tagtgttttt atgggaattt
    12061 ttgaaaaaag ttttacaata atttctaaaa ttaaaaaaag tattttaatt cttattttag
    12121 cttattctct aagtattttc ctaggaggac tttttggggc taaaaatttc ttaaatcctt
    12181 taaatttcaa tactatatct gcctcaaaac atgctttaag ctatgattat atcaacaatt
    12241 ttgaacaatt aaagcaagaa atacaaacaa atacaaagcc tataatgctt gattttactg
    12301 catcttggtg tgaaaattgc aaacttttag atgaattaac ctttagcgat gaaagaatca
    12361 tacaaaaaat gcaaaattac aaacttatca aagttgatgt aagcgaaaat aataatgaac
    12421 aaattaaaac catgaaagaa tttaatgttt ttggcccacc tgttttaatt ttctttgaaa
    12481 atggaaaaga aaaattaaaa atcacgggtt ttatcagtgc tgatgattta ttaaaaaaaa
    12541 tagaaccatg aaaattcaaa gtttgcaaat agggaaaatt aaaaactata aaaatttcca
    12601 aagcgcattt attaaagata cttacctaga agaaacacaa attgattttc taggtgtttt
    12661 agatgatcaa atagctgata aaattcatca tggaggctac cataaggcta tttttaccaa
    12721 ctcttgtcaa aactatccta tatgggaaag atttcttaat aaaaagctaa attttggctc
    12781 aatgggtgaa aatttgagca tcgatgggct ttgtgaacaa aatgtttgca taggtgatat
    12841 acatcaattt tcaaatgcaa tactgcaagt aagcgaacct agaaaacctt gtgtaaaaat
    12901 ttctaaaatt cacaataatc caaattttac acatgaaatt tttaaaacgg gcttgagtgg
    12961 atggtattat aaagttttac aagttggaca aatacgaaag catgaaaaca ttaaaatttt
    13021 agaaaaaaat tctacttcac ttagtgtatt tgaactcaat caactttttt actccccgca
    13081 tcaaattctt aagcaaaatc cgaatttatt agataaatta gaaaaattaa actctctcat
    13141 atctcaaaat tggcacgaaa cgatacacaa acgcttaaaa aatacttacg atataagcta
    13201 tatggatagc ttataagttt ttaaagttat ttttaggtaa aataattctt tttcgaaagg
    13261 ataatcatgc aaagacaaac atggagtagc acactaactt atattctaac agttgctgga
    13321 gcaaccatag gatttggagc aacttggcgt tttccctatc ttgtaggaga aaatggtggc
    13381 ggtgcttatg tattagtttt ttgtatagcc atgattatca taggcattcc tgttatttta
    13441 gttgaaaatg tcataggcag aaaagcgatg acaaatagcg tagatgcttt caaacaaaaa
    13501 tggcaaagta ttggatatat gggactttta ggaagctttg gcataatggc ttactacatg
    13561 gtacttggag gatgggtttt agtttatatt tgggaattaa ccctagggaa ttttagtctt
    13621 gccaatgtag taagcaaaga atttactcat cagtttttta acgacaaaat agccttcaat
    13681 cctttaggag ttggtatttt taccactgtt tttgtaatta ttaattatat tattttaaaa
    13741 agaggcatta tagatggtat agaaaaatcc gtaaaatttt taatgccttt attatttatc
    13801 tgtcttatta ttgttgtagg acgcaattta acccttgatg gagctatggc tggagttaaa
    13861 ttttatcttg aacctgattt tagtaaaatt ttatcaccaa aacttttaat cgatgtttta
    13921 ggacaagtct tttttgcttt atccctaggt tttggggtaa tgataacact ttcatctcat
    13981 cttaataaaa atgaaaatat ggcaaaaacc gctatttata caggggtttt aaatactatc
    14041 atagctgttt tggctggttt tatgattttt ccagcacttt tctcagcggg acttgctcca
    14101 gatagcgggc cttctttggt ttttgaaact ttacctatag cattttctca tatccatttt
    14161 ggcactattg tgtgtatttt attttttgtc ttactcttga ttgcagcttt aaccacaagc
    14221 ttgccaattt atcaagttat tattagcgta ttagaagaaa aatttaaata ttctaaaaat
    14281 ctttctatta acctaactct agggtttatc ttcatacttg gcaatcttcc ttgtattcta
    14341 acttatgggc cttggcgtga tattgttatc atcaaaggaa aaaacatttt tgatagtttt
    14401 gatttcatta gtggaaatat tttgtttgtt ttaactgcat ttttttgctg tatttatgta
    14461 ggttggattt taggcaaaca agaaagtcta aaagaactta gcaataacaa tacacttaaa
    14521 agttcatggt ttggaatttg gttttattat gtaaaatata tagtaccttt gattatttta
    14581 atcattttta tctatggaat tttaaactga ttttttaaat ttatatctct ctaacatagt
    14641 ggaatttcct aaaattccac cttgatgtat ataaagcaat ggttttttcc actcttgttt
    14701 taatgctata cttaatccta aaatatcata caacaagtca aattctatat tgcactttaa
    14761 ctttaaatcc atataaagct cataaaattc tttatacggc ttagcaaagt gatatttttt
    14821 atcacttgtt aaaaattcta aatttgaaaa atcatagctt ggatctaatg ttaaaatttg
    14881 ttttttaaga tatttaatat cacctacaca agcgcaagta aatactttaa atttagaata
    14941 ctttgccaaa aaagctgccg aagtgcctgt acccgaaggt aaaaaaatat caaaatcaag
    15001 ctttaaactt tgactttgca tttgaatttc ttgagcaagt tccatatagc catattgagc
    15061 ttctaaatta gctatacctt gttctataaa aacatcatct tttttacaca aagacaaagc
    15121 aaattgcttt aaggataaag aatggatatt ttctacaaaa tcaacaccat tttctaaagc
    15181 taaagcatag tttccacaag gattattctt aagaaaagta gaaatttttt cacaagcaaa
    15241 aacaagctta tatgatcttt gtttagcaaa aatacttaat gccgccaaag cattactttg
    15301 gcttcctcca taacttacaa aagattgatt tttaggatat ctttgatgga tataaaaagc
    15361 aagtttccta gctttatttc cattaatttc ccctaataaa tcatctcttt taatataaaa
    15421 ttcaaatccg ttaaaattga ttttttgtat aggactaatt gttttaatga aattcaaaga
    15481 atttttctac atcctttaaa gcattatcat ttttaatgct aaattttatt tctatgcgac
    15541 gactcttatc cttatcttca actccgttga caaacacagg atctgaaaaa gaacgtccac
    15601 ttgccattaa aagcttttga agcttatcac tcttataaaa agtatagata aaattcatca
    15661 cctcataagc tcttttttgc gacaaatcta aattataaat ataagatcca tcactatcag
    15721 tatgtccttc aataatgata ttttcaatgt tagaaaaaat ttttggatct tcaagaatag
    15781 catcaaaata ttcgcttaag atttttctca aacttgcctt tgcctcattt tttaacacat
    15841 aagaatcttt atcaaaaagt acttcagcag gcaaagaaat agatcctatc ttttcatcta
    15901 tagtgatatt attatcaagc ttactttgta attccttgct taaattttca cgaatcaaac
    15961 caagattttg caccttttct ttagcttttt gaaaatcttc ttgtaaattt ttaagctctt
    16021 catctttttt ctctagttga cctagtaaaa tcaaaatttg cttatcttta ttatctaaag
    16081 ttgagtttaa atctttactt aactgcttgt aatttgtaat attagcctct aattctgctt
    16141 tttgagaatt agcaagattt aaagcactag aagcattgtt taaatcagaa cttagtttaa
    16201 acactatggc ttctttattt ctaagctctt ctttactctc ctctaagcgt gcctcttgtt
    16261 tattgagatt atctttgatt tcttttaaat cactttgagt taaaacatat tttacaacaa
    16321 tagcacctat tagcaaaata aaaacaaaca gcaatcctgc cattaaatca gcataagcta
    16381 tccaaaaatt gctatcttct tttgactcat ttttcattta ttttctttat cttcattttt
    16441 tagctcatca ttgctttctt gcttagatat ttctgcttga atttcatctt gattttcttc
    16501 agtcttagac tctgaaaaat cttctatttg tttggtttca ttttctttat tctgattttc
    16561 atccccagaa agcttgctca tcatttgact tgtttcttca tcaagtgctt tcatttcttt
    16621 tttaagctca tccatcattt tgattttagc atcaatactt ttttcttctt catatacttc
    16681 tttaaattta tgcatacctt caaacaagct tgctttaaat ccctcaaaaa ccttttcttg
    16741 actttccaac attgcttttt cataaagttc aaaattttta ccaaaacgct ctattttttc
    16801 atcgaatgca cttagtgtct tatcaagatg atgaatttta tcactactga tatcaagcaa
    16861 gcgattatat tgttctgaca ttcttgtatt gatttctttt aaattttgat tgagcaaacc
    16921 tataccattt aacatttcac tataaagctt tccaagatcg cgttgatctc tttgtgcttt
    16981 actaagctca cccatggttt gtttgatatg ttcactactt aatctaatag ccttttcttc
    17041 tacatttagc atatcttgga aaataccaaa ctttctatca atagcatgat caagctctgc
    17101 aaaaaaatca tcattactaa cttgtttaaa aattgctcca attttttcaa aatgttgcaa
    17161 actttcagtt aaatatcttt gatcaagctc ttcttttgtc caaaaaaatc cacttgtagc
    17221 gtttttttga cgatttagca aacgatctat tttgctttta ccatattttt caaaaaacat
    17281 ccaccataat gcaagaaaaa ttccataaat tgaaacataa aaagcagttc ccactccact
    17341 taacaaatct gcaatttctt gttctaaagc ggctgtatca ctagaactaa aatttggcat
    17401 tgaaaaagct atactgataa aagttcctaa aattcccatc attggaaaaa ttgccgaacc
    17461 tatactagca aaattctcat ttcttgcacc cttaatatat gtataagcaa agtcatcaaa
    17521 attggcattt gatttcgtgt ctttccctat ggcaagaaaa tgcctcataa tatgtctttt
    17581 taaagcctgt ttaaattcat ctttttgttg ttcaaaaata ctatacgcat actcagcact
    17641 atgtctagca aaaatcaatg ctgtaaaaaa aatcacacct gtcataataa ccgtatgtaa
    17701 ttcgacctta aagtcaatta cattaaaata acccaataaa atcaaaatat aaagaaaagc
    17761 tggaataaaa ataattttaa aataaaccaa agaacctctt gcatctttgc cttcaggcaa
    17821 aacaagttct gaaatttcat ctgatttaat atccatgaaa ccaatacctc attaaaaatt
    17881 ttattttaaa gattgctact taatttgata aaaattttta aaacaaaata aaactaagct
    17941 tttaaaatgc ttagtttttg tttatacagt ttaaatcttc aaaagcgatt tcaagacgtt
    18001 ttatcatgct ttcttcaccg cttcttaacc aaacacgcgg atcatagtat tttttatttg
    18061 gcttgtcatc accttctgga tttccaattt gtccttgcaa ataagcccta tttttaagtt
    18121 catattcacg caccccatcc caaaaagccc attgagtatc tgtgtcaata ttcatcttaa
    18181 ttacgccata gcttactgca tttttaatat cttttagctc actaccgcta ccgccatgaa
    18241 atacaaaatt tataggctta tcgctattta aagcaaattt atcttttaca aatttttgcg
    18301 aattttttaa aatttcaggt tgcaagctaa catttcctgg cttgtaaact ccatgtacat
    18361 ttccaaagct tgctgcgatt gaaaatttat cactaatttt tccaagtctt tcatatgcaa
    18421 gagctacatc ttctggttgg gtataaagct tggaattatc aatacctgta ttatccactc
    18481 catcttcttc gccacctgta caacctaatt ctatttcaag cgcgacacct aaagcatcaa
    18541 gtttttgaag ataaacttca caagtgctaa gattttcttc taaactttct tcgctaagat
    18601 caagcatatg agaactaaat aaagcttgtc catgggtttt tttatattgt gcatttgcct
    18661 caataagccc atcaatccaa ggcaaaagtt ttcttgcagc atgatcagtg tgtaaaatca
    18721 caggcacacc ataagcttta gcaagtaaat gtacatgttt agccccacta attgcaccca
    18781 aaacttctcc attaggacaa tttttccctg cataaaattt tgccccacca tttgaaaact
    18841 ggataataac tggagaatta actttttttg cagcttctaa aactgcatta atagaatcag
    18901 ttcctacaac attaacagca gggatagcaa aaccctctgc tttagcatag tcataaattt
    18961 tattaagctc atctccgcta atcacccctg cttttacaat gtctaaaaca cccattattt
    19021 atattccact ttagcactat ttaagagatc ttggcctttt tgattgataa cttttttaaa
    19081 ttcttcaaat ttaagtccgt tttcaatacc ttgttttact tcatcaaatt tgatttgacc
    19141 tttagcttgc gaattttctt ttaagattac atgataacca aaattcgttt ttaccggagt
    19201 tgtagtaata gtaccatttt taagcgcgaa agcagcatct gtaaaaggct ttaccatagt
    19261 tgattgatca aaccaaccaa gctcaccacc ttggtttttt gaacctggat caattgattt
    19321 ctctttagca agctcgctaa atttagcatc tagttcttta ccttttaaac ctttaagttc
    19381 gttaataata tccttagctt ctttttctgt cgctactaag atatgttttg cttgcactct
    19441 tgcaggtttt acatatttgt ctttattttg atcataaaaa gctttaactt tagccgcatc
    19501 aattttaata gtatttaaaa ttttctcttg ataaacatta acaagtattg catcttttgc
    19561 acgatcaagt tcttttgtgt ataaagggtc tttttctaaa ttttgttttt tagcatcttg
    19621 caaaattaaa tcttgcataa tatattgctg aataagagct tttttttgat tatctggcaa
    19681 agttttaaaa tcctgtcctc taagcatagg ggcaaaaaat tcacttactt ctgtatcgct
    19741 aatgctcttg ccattaacag tagctactgt agctgcattt acatttaaaa ctacacctgc
    19801 aatcaaagtt gctgcgacta aagaaaattt tttcattagg tttccttttt aataaaatgt
    19861 atataaaatc aattatatct aaacttggtt taaagctaat taactaaaat taaaaaatga
    19921 aaagaaattt agaaatcaaa gaactttttt taaaacattt tgacaagcct gtaacagagc
    19981 ttaaattttc aaatttatat gagcttttag tctgcgtaat gctttcagcc caatgcactg
    20041 ataaaagagt taatctcatc actcctgatc tttttaaagc ttatcctgat attaaatccc
    20101 ttgcaaatgc aaatttatca agtcttaaaa cctatataca aacttgttca ttttttaata
    20161 ataaagcaca aaatcttata aaaatggcaa aagcagtttg tgaaaatttt gacggagaaa
    20221 ttcctcttga tgaacaaaat ttaaaatcct tagcaggcgt aggacaaaaa accgctcatg
    20281 tagttttaat agaatggtgc ggagcaaatt tcatggctgt agatactcat gtttttagag
    20341 tttctcaccg cttaggactt agcaaagcaa aaactccaga agctacagaa gaagatttaa
    20401 cacgcacatt taaagataat cttaactatc ttcatcaagc catggttctt tttggacgtt
    20461 acacctgtaa agctaaaaaa cctttatgta aagaatgctt tttaaatcat ctttgcaaaa
    20521 gtaaagataa ggaacttaaa tgaaaatttt catcttttta ctcactatat ctcttaatat
    20581 ttttgcctta gaaccttaca agcctagtgc tgatttttct tcttatttta acaatataaa
    20641 ttgctcgcaa atcttagata agttttttta tctaaattgc tatgattata aactcaaagg
    20701 cacaaaagct gttgcttata aggtagaagc ttcaaatttg aaagatagac aaatcaaaaa
    20761 acgccctcgc tttgaagatg atacaaatat tcctaaaaaa taccgcacta cttggagtaa
    20821 ttataaaaac agtggttaca cacgaggaca cactgcaccc aatgcttctt ttagctttag
    20881 taaagctgct caaaattcag tatttttaat gagtaatatt accccacaaa atgcacaaat
    20941 aaataataaa atttggaatg aaatcgaaca aagagaaaga aatttagctt tagaatttca
    21001 aagtatcgaa gttttaaatt tagtacttta cgataaagaa ccacaataca ttaaaaaccg
    21061 tattgctata ccaagttttt atgtgaaaat tattaaaact ccgaaattta aagaatgcta
    21121 tcaagcacca aaccacgaag taaatgatga aaatattaaa cagtatcaaa taaattgtga
    21181 taaattttaa ggtataaatt atggagataa atgctcttac gataaccact ctttatatca
    21241 taggtatttc cgcagaagga atgacaggag ctttagctgc aggacgccac aaaatggatc
    21301 tttttggagt tatttttatt gctctcgtaa cagcaattgg aggcggaagc atacgagatg
    21361 tgcttttagg acattatcct ttaacttggg ttaaacatcc tgaatatatt attttaatct
    21421 gtttttgcgc ccttgtagcc acaaaaattc cgcgcgtagt aaccaaactt gaaactttat
    21481 ttctaactct tgatgctata ggacttgttg tttttagcat acttggagct caaatagcta
    21541 tagatcaaaa ccatggcttt atcatagccg ttgctgccgc tgtaattacc ggtgtttttg
    21601 gtggaatttt aagagatatt ttatgtatga gaatcccctt ggtgtttcaa aaagaaattt
    21661 atgcaggaat tgccataatt gcaggagcaa tctattattc tctaataatt tggcttgagc
    21721 ttaatgccct agtttgcaca cttttaactc tttttatagg agtttttgca aggcttttag
    21781 ctatcaaata tcaatggtct ttacctattt tttcttacaa tgaagaaaaa taatttatcg
    21841 ttgctttata caagtttgct aagatattaa aaattttagg agattgataa atgcgaagac
    21901 taagtatttt acttgcaatt ttaatagtta ttaatataac agcttgtgat agtaaaacag
    21961 aaaattacta caaaaatctt cctagcgaag caaaagaaaa agcgaaagaa tgcaaagaaa
    22021 gcggaactct tagcgaagat tgtattaatg cattaaaagt tggtgttaaa ccaacaaatg
    22081 aagagggtaa atacagtcca aacacaccga aaaaatctga taatcaaata ttagaagctt
    22141 taaaacaaaa tgatttaaaa aaagaaaaaa ccacaaaaga tattaaccaa agttcagaaa
    22201 ataatgaaag tattataata ccacctatag cagaaacacc ttctgaaatt tatccttcca
    22261 aaacaacaga aaacaatcaa agttctatct ttagcgatga tgttaatatg acacaggaaa
    22321 aatgaccatg aaaataactc tttttttaag ccttattggt atattttttg cagcatgcga
    22381 acaaaccaaa agtgtagaat attatcaaaa tcaccccgag gaagcaaaaa aaagaagttt
    22441 agaatgcaga cacaaagcta tcattagtca agattgtgtt aatgcatata agataggttt
    22501 tccaaaagat gaatgggaag atgaaaatat ttctaatcct taaaagctat gaaagtttca
    22561 aaatttgccc atttaaaaat actttctatt ttcttaaaac ctgccttttc tagcatattt
    22621 aaattttctt tttgactata aggaattaaa acattttcca aagcttctct tttagctgcg
    22681 atttcaaact tagaatagcc ttgtttttct ttataatcag cataaagttc tatgatattt
    22741 ttagacaaaa aagcatcttc ataaaggatt ttttcactca taatcaaaat gcctttagag
    22801 tttaaatttt tataaatttg atcaagcaat tcttgtcttt taggaggacg aataaactgc
    22861 atggtataat ttgctacaaa aacatcgcaa gtaaaaaaat caaattcgca taaattagct
    22921 tcaaaaaaac ttatatcaag cccataagct ttagcttttg attttgcaac ttcaagcatg
    22981 gaagcagaat tatccacgcc aaaaagttta aaatcctttc ttagatttgc caaaaaaatc
    23041 aaaaaattag cacttgagca gcccaaatcg caaacacttg catttgtagg taaaatttta
    23101 gccaataaat tgccacaaag ttctaaattt tctctataaa atggtacaga acgattgatc
    23161 atatcatcaa aaacactagc cacgctttta tcaaattcaa attgtttttt agggctttgt
    23221 ttaaaaagtt catctttcat catttttcct taataattct ctagcttgct ctatgtcttt
    23281 agcaatttga tttttaagtt tttttagatc ttgaaatttt tgattctctc ttagaaaaga
    23341 tataaactcg agttcaaaaa actctccttg cgtgaaattt tcacccaatt cttctaaaat
    23401 atgactttct atagcaaaat tttcatcgct tgatcttaca cctaaaaaac tcacactttt
    23461 ataagttttt ctttgacttt ttaacaaagt aacataaaca ccattttgag gtaaaaaata
    23521 accttcacaa tctaaattta tagtcgcaaa aagttcttta gagcccaaac cttgtccttt
    23581 aatcatcttc cctttgatac tataatctct tcctaaaaat tcttttgctt tttgcaaatt
    23641 tgcttttgat aaaaaatcct taattaaact tgcatgaaca cctattccgt ctatgctaaa
    23701 ttcatcaact attatagttt ttatcccact taaagactca atatctttag cattataagc
    23761 tctatttttc ccaaaagaaa aatcatatcc caccactata aattttaaat tgacaaattc
    23821 ttttttcaaa aagcttaaaa aatctctacc atctaaagat tttatacttt caaaatccac
    23881 ttctataact ttttttcctg aaatttcttc tttttgacga tttgaacaaa gaaattgacc
    23941 cttaaattta ttaataacta ataaagcccc attctcatct aaacatttta caagttttag
    24001 atgtcctaaa tgcataccat caaaacaacc tatggctaaa gaggtaatat taatttttga
    24061 tatagtagta aaaatattca acattacctt cctttccttt aatgcttgat ttttgcgtat
    24121 tttttaaaag ccaacccaat ttagcacatg ctttttcaaa atccattctt gcctttaaga
    24181 ttgccttatc atcttttaaa acaccttttt tatctctttt gatatttttt cccacttcaa
    24241 actgaggttt aaaaagtaaa ataatttcct ttaaagctaa attatcaata taataaagta
    24301 aattaataag agaaataaaa ctcacatcac aagtaacaag ttcaaatttt tcttcacttt
    24361 taaaggctct aagatctgta ttttcatgca agataatttt ttcatttact cttaaacttg
    24421 gatggagttg attactaccc acatcaagag cagtgatttt taaagcctga ttttcaagta
    24481 aaatttgaac aaaaccgccc gtactagatc ctatatcaag acaattttta tgttttattt
    24541 caatatcatt ttcttctaaa aattttttta atttcaaagc tgctcttgaa acataaattt
    24601 cacttaaaag atccaatttt aactcattgg ctaaaagtat atcttcagga tttaaatctt
    24661 gcgttttttt taaattttct aaaaaatttt tcacatcaaa agaagcttta aaactcttac
    24721 cattaagtaa aatctcttca ttttctataa gctctaaggc tttatttcta ctgatattta
    24781 aacgctttga aacaaaaaaa tcaaatctca ttttaaactc tcatttattc ttttttctaa
    24841 gtcttctttt tctttagaaa accaccaaat acctatttca aaagcatttt ttttaaaaat
    24901 ttctctaaga tctttaagat ctttttcaaa aagatctttt tctttttgaa ttaaacttaa
    24961 gttattatct tttaaaaaat taaaattatt catccataaa agtatttgct cttgttcgga
    25021 ttttaaggca ttatttcttt gctcttttaa aaaataattt cctaaaacca tgataaaaca
    25081 taaaaataaa acaattattt ttatctttat tttcaaaaca aaattaaaaa caaaagccaa
    25141 aagagaacaa aacataaaaa aattaaaaaa atcaaaaata aaatttaaag ccctaaaccc
    25201 caaatatcca aaataagaaa aaataaaaaa ttttaaattt gaaacaaaat gtaaaaattc
    25261 agataaaaaa tcaaaataaa caaaagaagc actcttatag gcaatgattt tcctagaaaa
    25321 aagttctaaa tttaaaagtt cattgtaagt aaaaaaaagc ccataaaatg cataaaataa
    25381 agcagtaaaa aaactagcga taacaactat tctaaaatca ttataagcat tatctacaaa
    25441 ttgcaaatgc aattcttttt ttaaaaatat catcaataaa ggtaaaatta taaatataaa
    25501 aacaaaatca attttttcaa gatttaaaaa atttaaaaat aaagaaacaa gtccaaaaat
    25561 cgccaagaaa aaactaaaaa tataaagata aaaatccccc atactaacac gataaaacaa
    25621 acttccctta atcaaagtag cttcttttat aatatttttt ctaagcttta aaaataaaaa
    25681 gaattcccaa aaaagtgtta aaaaaataga aattaaaaaa aataaagaaa aagcactcct
    25741 ttgccaagtt agcaaaaagc caaaaaggct taaaagcgtt aaaatataag aactattctt
    25801 taacaagctc attaaaagca ctttcatcta tacattttac ttcaagctct ttagccttac
    25861 taagcttaga acctgcctct tctccaaaaa gcacatagtc agtcttttta gaaaccgagc
    25921 cgcttacctt acccccaagc ttttctatca aagccttaaa ctcatctctt gggcgtgaaa
    25981 gagtgcctgt aatcacaaaa gttttaccaa aaatcacacc atcgcttttg atttcaagtt
    26041 tttctatttt caaatttaaa agcttgtaaa actcatcaat tcttgtgcga ttaacacgcg
    26101 taaattcgca aagacttaaa gccatttgct ctccaaaacc ttctaaattg gcataagctt
    26161 caaagctttg cttgtaccac tctttaccaa aacttaaact taatttttta gccgcaacct
    26221 cgccaatatg ctctattcct aaagctgtga taaaacgaaa aagctcacat tctcttgctt
    26281 gttctatggc atttaaaaga ttgttaattt tcttttcttt aaagccttcc aaaccttcaa
    26341 aatcattaaa ttttaaatga aaaatactct caagcgtagt gatttttttg tgcttgtata
    26401 aaagttctac tatattttct cccagtccgt cgatattaag acatttttta gaaacaaaat
    26461 gaatgataga atttacaagt ctatcttcac aatctatatt ttgacatttt attaaagttc
    26521 cttcatccaa aagctcactt tggcaagtag gacaaagctt agggcgtgaa atttccatct
    26581 ctaaaccttc tctacgctct ttaaaaacct tagtgatttt agggataaca tcgccacttc
    26641 ttatcacgct tacaaaatca ttgattttaa catcaagtct tgcaatttca tcaaaattat
    26701 gaagggtggc tgattttact acaaccccat ctaaatttac aggttctaaa actgccacag
    26761 gagtgatcac tccacttctt cctacttgta aatttacccc tattaaacgc gtggtttttt
    26821 caagcgcagg aaatttaaaa gctgccataa attttggaaa ttttaccgta tagcctaatt
    26881 cttcacaaag tgcaagatca tcaactctta ccaccattcc atccatcatc ataggttttt
    26941 tttctcttag agctaaaagc tcatcataag ctttcaaaac ttcgtctaaa ttagcgcaaa
    27001 gtcttacaaa atcatccttt aaaaaaccaa gctctctgat aaattgcatc acctcgctgt
    27061 gtttggtgaa atttaaggta ttttccccta ctccccaagg ataaaatttc aaatttcttt
    27121 ctttagtgat gcttgtatca agctgcctta aactcccact tgcagcattg cgtggattgg
    27181 caaataaact ttgatttaaa agggctcttt tttcgttgat tttctcaaaa tcatctttta
    27241 aaatcaccac ttctccacga atttctatcc tttctttata ggctatattt ttaggtatat
    27301 tttctatctc aaaaacatta agcgttatat cctcacccac ttcgccatcg cccctagtgg
    27361 cgccgcttac taatttacca ttttcataaa gcaaatttaa actcgctcca tcaaatttag
    27421 gctctataaa aaagtttttt tcacattttg cgcgttttgc ccaagctcta agctcactct
    27481 catcaaacac atcttccatc gaccacatac gctttaaatg agctattttt ttaaactcac
    27541 tttgtatagt aggagctatt ttttgcgttg gagagtcttt tgaaatttca tctttatttt
    27601 gttcttcaaa aactcttaat tctctgatta aagcatcgta ttcttcatcg ctagccaagg
    27661 gttcatcttt ttcataatat gccctcatcc acaaattagc taaagcaact ttttctaaat
    27721 actcttcttt tttcatctaa actcctatat tatccattgc ctgcgctaaa gcaaaaagtt
    27781 gtttatgctc atataaatca tgcactctta taatactagc accattttca aaagccttta
    27841 aatgcaaata taaagttccc gctaaacgat ctttaatctc gctttgaaaa tacgcattaa
    27901 tcacactttt acgactcgca cctataagta aaggtttatt aaattgcaaa aaatgttcta
    27961 agtgtttgat taaaatcata ttatgccccg cactctttcc aaaaccaata cctacatcta
    28021 aaatactttc ttttactcca aaactttcta aaagctcaag tttttcttta aaaaacaaag
    28081 tcatctcatc aagcaaatct tcataaaaag gattatcttg catgttattt ggattgtttt
    28141 gcatgtgcat taagcaatat tttgccccat atttacttgc aagtttggct agattaagat
    28201 ttcttaaact tgtaatatca ttaatgagtt taaaaccctt atttaaagca tattctagac
    28261 aatattcatc aaaactatct aaactaaaaa ttgcttgttc gtaataattt ttctcataaa
    28321 ttaagtcaag tacttttttc agtcttttaa attcctcttc cttgccacaa tactcactcc
    28381 caggtcttga gcttaccgca cctatatcga tatattcagg ctttaaagca agaaagtcat
    28441 taagcctttt ttcaaagtct tcttcactca cacgactttt tgcattaaaa ctgtcttcat
    28501 tgacattaat cactgccata agctcggctt ttttcggttt taaaaaatct ttttgcaaaa
    28561 aaagagccaa atttttaagt ccaaaatctt gaagtttttc tttgacaaca agcttttgaa
    28621 tttgctcttt acttgccatt aaaagcgcat ttgaatgagt gatttttgca gtaattactt
    28681 ctttatgagt aataagttca gctcctactc ttaaagcatc ttgttttaaa atatttgccg
    28741 caggagtaga aatatctttg ataaaaataa aatgaatttt tgttttttca ctcatgatct
    28801 tttgtcccat tttatgaggg tttatgaaag aacaaagcaa attaaaatcg gtgtttggat
    28861 tgattttaaa aaatttcatt ttatttcttt gtatagtaat ttaataaaag agtagctaaa
    28921 agcaccccgc ttttagaatt taattttgca agctcataac tttcataaaa aaactctaat
    28981 tcttcagcgt taaaatcttt atatttcaca cattctttag caagcaatgc gatttgatcc
    29041 ataagttcat ttttatccaa attttcattt ttttgcaaaa aatcaaaaag cattcttaaa
    29101 tccattcttt taagatctaa atcaagtttt ttaacttcct tttcaacttt tcttttttca
    29161 caaataagac gtgattttat agtaggtaaa agtaaatttt tagaaggtat cacaataaga
    29221 aatttaatat tttttggagg ttcttcaagg agtttaagta aaaaattttg cgcttctatc
    29281 ctataagaat ccgccattaa aacaataatt ttttcttcag tttctgcgat atagctttct
    29341 ttttcaaccg ctcttgcatc atcaagtaaa aattcatttt gtggtataaa aaatcttaat
    29401 tttttaatac caaaattatt aatcatttct tccttaatac ctaaaaaatc ttcactgata
    29461 ataatcttac taataaacaa aatatttatc ctaattgcac cttggaaaat aatattgcat
    29521 ccaaacttac atcaaaaagt tgatataaac taataagctt gatatccaag tctttatctt
    29581 tagaatttaa ataaaaacta tcttgtaact gctcatcaaa aagccacaat aaactatcat
    29641 ctcttgattt agcgattaaa gatttattat cagaagcact tcctatataa aaatatacat
    29701 aaccattagg aaaagaaatg tcaagcaagt cattaagtaa agctatatct tctgaacttt
    29761 gtactttctt cttacataaa gaatttaacg acacaaaagg gagcatggga cgagtggctt
    29821 ttgaatttat attttttaaa aaatactctt cataccaaga tctttgttca tcacacatta
    29881 atacaaaagt gcgtccttct aaaagatatt taagtcttgc agccatcaaa ggagcccatt
    29941 ctaaacgacg cgactccaac catgccataa aagctccgcc attgcgaata ttttcaagag
    30001 taaaacttaa aaaatcactc atttatttat caagtccgta gcactcatgt agtgctctaa
    30061 ctgcaagttc tccgtatttt tcatgaacta tcattgaaat ttttatttca ctagtagaaa
    30121 tcataccgat attaatcccc tcatcagcta aagctttaaa agctttactt gccactcctg
    30181 aatgtgattt catacctacg ccgactatag aaacttttac tacagcacta tcactttcta
    30241 tagttgtttt tgagcttaaa attttttgca tagcattttt ggctaattca agttcatttt
    30301 gaggaaccgt aaaacccaaa tttgtagcac catcaactcc aacattttgt ataatcatat
    30361 ctacattaat attttcattt gctaaaacag aaaaaatttc agctgcgatt ccaggcttat
    30421 cttctatatt tcttaaagtc actcttgctt gatttttatc caaagcaata ccacttacta
    30481 aagcttgttc cattccatct tcctttgtta tcattgttcc ttcgttattg ttaaaactac
    30541 ttctagttac taaattaaca tttaattttt ttgcaagttc tacagagcga ttttgcaaaa
    30601 cttttgcacc taaacttgca agttcaagca tttcttcata agaaatttta tccaatttct
    30661 ttgcctttgg ttcaattctt ggatctgttg tataaacccc atcaacatcg gtataaattt
    30721 cacacaaatc cgcatttaag gcacctgcca ccgccacagc acttaagtcg cttccaccac
    30781 gccctaaggt agttacatta ccttcctcat ctacaccttg aaaacctgct ataacaacta
    30841 ttttaccatt ttgaagttct gattttatcg cttttgtatc aatatgatga attcttgcct
    30901 ttgtaaaaac actatctgta ataattcctg cttttctccc agaaaacgat atagcgggac
    30961 aacccttttc atttaaagca atagaaagta aagcgcttgt tacacgctct ccgctgctta
    31021 aaagcatatc catatcttta ccattaggag ttttactaaa atattcagct tgctcgataa
    31081 gagtatttgt caccccactc attgcagata ctacaacaac aagttgatta ccctgttgcg
    31141 cactttggat aaccctattg gctactgctt cgatacgctc aagtgttcca acgcttgttc
    31201 caccatattt ttgaactata agcattttag atataacctt tctcttcaaa atatttgatc
    31261 actctaacat aaatattttt tttgaaatga ttaatcattt caaaaatttg tttaacactc
    31321 acaaattgat aatcatcaaa ttcaggatgc ttagtattga tattgattgt agcaccgtgc
    31381 tttaaacgca ctaaaaaata tttttgaatc tgcccatcat aaggatacat ttttttaaca
    31441 attttactcg gaaaatcata actcaaccat tctggatact cagcaatgat ttcaacctca
    31501 tcagtgccta tttcttcttt tagttctcta aataaagcgt ttttgacact ttcaccttta
    31561 tcaatacctc cttgtggaaa ttgccaaata ttatccatat cacttcttct agctataaaa
    31621 atcttacact caaaaggata agaacttgat aaaacaatag ctgcaacatt tggtctataa
    31681 tttttctcgt tttccacaat attgttcctt aaatctcaag gatataattt taacctaaat
    31741 caaatcaaat ttttattaaa atacattaaa aaatttaata aaatatttta gggtttttat
    31801 gcatttttat atccatattc cattttgtga aagcaaatgt aattattgcg cttttacaag
    31861 tttgaaaaaa aatgattatg aaaaagccta ttttaaggct ttaaaagaag atattgtttt
    31921 tcaattaaaa caatttaaca ttcaatcaaa tcaaattaaa accttattca taggcggagg
    31981 aacaccaagt tgtgttaatg cgtataatta tgaagatatt tttaaaattt tatatccctt
    32041 actagataaa aatgtagaaa tttcatgcga agctaatccc aactcagcaa cattaaattg
    32101 gcttaaaaat atgaaaaatc taggagttaa tcgcatttct tttggagttc aaagttttca
    32161 tcctaaaaaa cttcactttc ttggaagaat tcacaatcaa gaaatgatta tcaaaacatt
    32221 agaaaacgca aataaagtag gttttaaaaa tatcaattta gatcttattt atgatacgaa
    32281 attagacaat aaaaaaatgc ttgaatttga actcttacac ttaaaacaaa tcaaggattt
    32341 aatcacacac cttagtgctt ataatttaac catagaatca aacacagcct ttgctaaaaa
    32401 agaacatttc aaaaaaaatg ctcctaattt aatgaaattt ttcatcaaac aacttctaga
    32461 gcttgacttt tttcaatatg aaatcagtaa tttttcaaaa accaaagccc aaatttgcaa
    32521 acataatctt gcttattggc aaggaaaaaa ctacctagct tgtggattaa gtgcagtagg
    32581 attttatgaa aataagcgtt tttatacagc aaaaaattta aaaaattaca tagaaaatcc
    32641 tacttttaga tctatagagc aactaagttc caaagacttg aatttagagc acctattttt
    32701 aggacttaga agtatagtag ggattgatga aacaaaactc aatcaatggc aaaaagacaa
    32761 aataaatata ttattaaaag aaaaaaaact tttttacaaa aataaaagat attttaatcc
    32821 taattttctc attagcgatg aacttgcttt atatctctca tcttaaattt aagtttttta
    32881 agtaaaatat ttattaaaat atcaaatcaa agagtaatga ttaatgagtt ttggtgaaat
    32941 tatagttatt ttagttgtag cgattttagt cttaggacct gataaacttc cagaagctat
    33001 agtacaaata gcaaaaattc taaaggctgt aaaacgcaac atagatgatg caaaatcaag
    33061 catagaaaaa gaaatacgca tcaatgactt aaaagaagaa gctaagaaat acaaagatga
    33121 attttcaagc actaatgaaa atatacgcaa aaaactcagc tttgaagaat ttgatgacct
    33181 taagagagat attttagata aaacaaaggt agatttaacc tttgatagca gagatgataa
    33241 agtaaaaaat aaccttagcg gacaaaattt aaatacagaa gaaaaaccaa atcttagcaa
    33301 attagaaaca caagataaaa acggaaaaat aaatgtttga agaattaaga cctcatttaa
    33361 tagaacttag aaaacgcctt tttataagcg ttgcttgcat tgtagttatg tttattgtat
    33421 gttttgcctt gcgtagctat atcttagata ttctaaaagc tccacttata gctgttttac
    33481 ccgaagtagc caaacatgtg aatgtaattg aagtacaaga agccttattt accgcaatga
    33541 aggttagttt ttttgcagcc tttatctttt ctctacctgt aattttttgg caattttgga
    33601 aatttgtagc tccaggactt tatgataatg aaaaacgcct tgtagtgcct tttgttagct
    33661 ttgcaagcat tatgtttgcc tttggggctt gtttttgcta ttttgttgta gtgcctttgg
    33721 cttttaaatt tttgattaat tttggtttaa atgaagattt taatcctgtg attaccatag
    33781 gaacttatgt agattttttt accaaagttg ttgtggcttt tggcttagct tttgaaatgc
    33841 ctgtaattgc ctttttcttt gctaaaatcg gacttataga tgatagtttt ttaaaacgcc
    33901 attttcgcat agctgtttta gttatttttg ttttttcagc ctttatgact ccacctgatg
    33961 ttttatctca atttttaatg gcaggaccac tttgcggact ttatggactt tctattttaa
    34021 ttgttcaaaa ggtaaatcct gctccaaaag ataaagaaag tgatgaataa agacttactt
    34081 ctttcaagct atgattacac tctagctaat gaactcatag ccaactatcc tacaaatcca
    34141 aaagaagatg ctaggctttt ggtttttgat cgcaaaaaca aagaaatttt tcatactact
    34201 tttaaaaatt tacaagactt tttacccaac tgcgcgattt ttttcaatga taccaaagtt
    34261 attaaagcaa gaatttatgg caataaagca agcggaggaa aaatagagct tttcttgcat
    34321 caaccttttt taaattctca caatccgctt tttctagctc aaattaaagg gcgcattaaa
    34381 aaagatgaaa tcttatattt taaagaggat ttaaaagtac gcgttgtaga acttttaaat
    34441 gatggtcttc gaaaagttca attttttcaa aatgataaaa ccttagacac ctcaaatctt
    34501 tacaacctgc ttgacaagat aggacatata cccttgcctc cttatattaa aagggaggat
    34561 gaaaaaagtg atttgaaaga ttatcaaagt atctttgcaa aaaatttagg cgcagtggct
    34621 gctccgactg caagtttaca ttttagtgag actatgcttg aaaatttaag aaaaaaacac
    34681 gaaatttatc atttaacctt gcatgtagga gctggaacct ttaaaagcgt ggaatgtgaa
    34741 aatatacaag agcataaaat gcatagcgaa ttttttaata ttccgcagca agcatgtgaa
    34801 attatagatt ctaaacaagc tattttaggc gtaggaacaa cggtaacaag aaccatagaa
    34861 tattatacaa gaactaaaac aaaaaatggt ttttgtgatc tttttttaca cccgcaaaat
    34921 ccacctataa gacaaaatca tcttttaacc aattttcatt taccaaaatc tactcttatc
    34981 atgctagttt cagcttttat cggtagagaa cagtgtttaa aactttatga actcgccata
    35041 aaagaaaaat atcgctttta ctcttatggc gatgcgatgc taatcttgtg atttttcttt
    35101 aaaatttatt gctattttag cttgaagttt tagccaatct ttttgaagca tgataggaaa
    35161 acctccataa acacgcccgc cttctaaatt tttactcaca ccgcctcttg cagctatagt
    35221 gctaaaatcg cctattttta aatgtccact cgttgcactt tgaccaccca taataacatt
    35281 gcgtcctaac tcacttgaac ctgaaattcc agtttgtgcc acaatgatac aattttgacc
    35341 tatattgcaa ttatgtccga tttgaactag attatctacc ttagtacctg ctttgataat
    35401 agtactatca aaaactgctc tatctatagt tgtacaagcc cccacttcta caaaatcttc
    35461 taaaaccacg ttgccattat gataaatttt ataatgttcg ccgtttttat tgtgcgcata
    35521 accaaaaccg tcacttccta ttacacaatt agcaagcaga tgacattttt taccgatttt
    35581 agtatcatta taaatcacta cattaggatg aataatactc tcatcaccaa tgctgacatt
    35641 atcgcctata taagctcctg ccataatgat tacattttca ccgatattta cattatcacc
    35701 tatataaaca ttaggcatga ttcttgcgct ttttgcgata ttttgtactt tttctttagc
    35761 tgtgcttatc aaaggtttag caaaaagctt gcttaaaaaa gcaaaactca aatgtggact
    35821 ttgagtaatc aaagctttag tatctttagg tactaaattt tcatattctt tagatactaa
    35881 aatagcagca gctcctgtgt gaggtatatc tttggtattt ttctcaccat cacaataagt
    35941 aagctctgta aaatttgctt tcaataaaga atttaaagca ctgatttcta tatcctcgcc
    36001 tttatattcc aagcttaaaa attctgctat ttcacttaat ttcatttaat ctccatcaaa
    36061 acagatccac tgcgaactat atcactagga ttgtattttt taattgtttt taaaaaatta
    36121 tcaatgcgat ttgcatcatc agcaaccatt aaaaacaaaa aattctcatt gctatttgca
    36181 atagtaccat tataagcttt caaaacggca tcaagtccac ctaaattttc atttaaagga
    36241 attttcacta aagccatttc tttgtcaata aattcttcac tttctatcac tttataagta
    36301 ggaatgagct tatgaagttg tttgactatc tgctcaaaag ttctttcatt tcctgaagtg
    36361 actatattaa tacgagaaaa ttctttattt tccaaaggtg ctactgtaag cgagtcaata
    36421 ttataacctc ttcctgaaaa aagtcctact atacgagata aaaccccatg ctcatttaaa
    36481 acaattaccg ataaaaccct tctcattgtc tatcctttgc ctttggtaaa atcatattat
    36541 aaatcgcacc tcctgcaggc accataggta aaacatcttc aaagcgatca atttttacat
    36601 ttaaaagaga ggttttatca ctttttaaag cttggctaaa agcttgaatg aattcttctt
    36661 tgtttgaaat ttcataacct tcacaaccaa aaccttgagc tattttgata aaatcaggct
    36721 gagtgcttaa atcagtttgt gaaaaatgct ctttataaaa catactttgc cattgtctta
    36781 ccatacctaa aaaggcatta tttaaaataa tatttatagc ttttatacca tactcataag
    36841 cagtcataag ctcttggata ttcattaaaa ccgatccatc acctacgaaa ttaatcacca
    36901 cttcttcacc cacagcaagc tttgcaccca aagcagcagg taaagaatat cccatagttc
    36961 cttgccctcc acttgttgca agttgtcttg gataattaaa aggataaaac tgcgctaccc
    37021 acatttgatg ctgacccaca tcggtaataa tccttgcatc tggagccatt ttcgcacatt
    37081 cttcaatcac ccattgcggt tttaaaatct cattgctatc ttcataagaa agcggataaa
    37141 gttcattata acgctttaaa gtttcatgcc attctttaaa agttgtgttg aaattttcct
    37201 ttttaagctc ttctaaaagc tctttaagaa cttctttaat atctcctact ataggataat
    37261 gcgcattgat aatctttgaa atagaactag gatcaatatc aacatgaact atagtcgcat
    37321 gtttagcaaa ttcacttgtt tttcctgtaa tcctatcatc aaatctcgct cctacactca
    37381 caagcaaatc acactcactt aaagccatat tagcagcata gcttccatgc atgcctgcca
    37441 ttttaagatt aaaaacatca tcacttctta aagttccaag cgccatcaaa gtttcaactg
    37501 ctggaatttt tgtaaatttt ataagctctc tgatttgctc gcttgcatta gaactgatgc
    37561 aacctccacc taagtaaaac aaaggtcttt ttgcttcttt taaaagctct gcaaattttt
    37621 taatttgctt tgagttaccc ttataaacgg gcttataagt cttcatggaa atttctttag
    37681 agtattccca aagtcccaaa gttgcactta cgtcttttgg cacatctata tgcacaggcc
    37741 caggtctacc acttcttgct atataaaaag cctcttttaa aatgcgtgga aactcttcta
    37801 tacaagtaac taaataatta tgctttacac aaggtcttga aatgcctact gcatcaattt
    37861 cttgaaaagc atctgtacca ataagagaat ttgccacctg ccctgaaatc aacaccaaag
    37921 ggatagaatc gctataagcc gtagctagac ctgtaatagt atttgtaaaa cctggtccgc
    37981 ttgtaactat agctacgccc acttctccgc tcattcttgc gtaagcatca gcagcatgca
    38041 aagccgcttg ttcatgacgc actaaaatat gtttaaaata cttttgattg taaatttcat
    38101 cataaatatt aagcgcagcg cctccaggat aaccaaaaac aattttaaca ttttcttctt
    38161 ttaaagcctc gcaaatcatt gccgaaccgc ttaactcttt cataataaca ctccaaaaaa
    38221 ttattgtaaa agctctttaa gtgctaaatt aagtcttttg ccatcaacac tcgcacctaa
    38281 ttttatttta gcttctttca ttaccaaacc ttgttctttt agtgaactta cgcccaattc
    38341 ttctataagt tgttttaagg ctaaagttaa ctcctcatca cttagttgtt taggcagata
    38401 aatttcaaaa agacttattt cattttgttc tttttgtgct aaatcttcac gatttgcctt
    38461 aagataaagt tcgattacgt ctttgcgttt tttgatttca cttgcaatga ttttataaat
    38521 tctttcatta tccaactcta ttctttcatc cacttctatt tgcttaaaag ctgcatttag
    38581 agttcttaaa ctatctcttt taaaatcatc tttttgtttc attgcctctt tgatatcgtt
    38641 taaaatttgt tcttttaaag tcattttttt cctttttagt taaaattaca agctttaaga
    38701 tttaaaccaa aaccttctaa acctatatag tctttatcac aactttgaga taaaagttta
    38761 atttcttcta taccaaaata tcttaaaatc tgtgctccta taccatagtt tttgtattga
    38821 gtagtactgg atttttctcc ttgcatgaaa actataacgc caccattttc actaagaaat
    38881 ttgatttgct ctaaaagttt tgaaaattta tctgaagtta aaagctcaaa atcactacca
    38941 ctgatatgaa atttaacatt ttcacatttt ttgatatctt taaagcaaaa agctatgtgt
    39001 tgggtttgat tatgatcact aaagataaat ttttctgctt taaagcctgc taaaacactt
    39061 tgactttttt cttcaagctt aataaggctt tcatgtttta ggcgatattc tataagatcg
    39121 cttacggcta tcatatttaa atcatgtttt tggcaaaaaa tttctagatc ttctcttctt
    39181 gccatatctc cattatcttt tacaatttca caaatcacac aagcaccttt taatcctgct
    39241 aatttacaaa gatcaaccgt gccttctgta tgacctgtgc gttctaaaac cccacctttt
    39301 tttgcgatta aaggattgat atgtcctggt cttacaaaat cactcgcttt agcattatca
    39361 tcggcaaaaa tttgtatagt catatttctt tcataggcgc taactcccgt tgtagcatct
    39421 tttgcatcta cggttatagt aaaagcagtt tcgtggtttg aagtattttt aggcaccatt
    39481 aaaggaagtt caaatttttt tgccaaagtt tcatctaagg ctacacaaac cacaccacga
    39541 gcttctttta tcatgaaatt tactttttct tgagtgctaa attgcgcagg aaagattaaa
    39601 tcgccttcat tttctctatc ttctgcatct accataacaa gcatttttcc tgcttgtaaa
    39661 tccttaatcg cttgttctac gctaacaaat ttcattttta tttccttaaa atttttaaaa
    39721 ttataactta aattgcttga caaataaatt aaaattcatt ataatcacac ttttaaaaaa
    39781 tatttattgg ggtatcgcca agcggtaagg caacaggttt tggtcctgtc attcaggggt
    39841 tcgaatccct ttaccccatc cacttcttat tttatatttc aaagatctta tatgccgcga
    39901 agtagagcag tggttagctc gtcgggctca taacccgaag gtcgggagtt caaatctccc
    39961 cttcgcaacc agttaaggat ttaaaataaa ttttatttag atagattgtt taaataactt
    40021 tttaaaatat cttctagccg tattttcagt tctataggag ctagaatttt tatataagga
    40081 atccactgtt taaccaaatg taaaatttca tcttcatagg aaacttgagt gcttaaagta
    40141 tagcttgttt catctttatc aatgatttga taattgctta gtatttcttt tctaaaaaaa
    40201 tattccttag catttttatc aagttttaaa atcacttctt tgctttctcc aagccagata
    40261 ttaggatcat tttggatttg ttcctcaagt ttttcattgg gaataaaatt ttcattttta
    40321 gtgcgaagtt ttgaaatttt atctaaatta aaatgtttta atttatcgtt ttcatcccct
    40381 aaaagatacc aaattccctt gtaatttacg agtttgtaag gtttgatttg gcgttctttt
    40441 tccttataga aaaaatttaa tacattgtgt ttgagtatag ccacactaag atctttaaaa
    40501 agctcataat ccaccttttg aaaaccttca ttttttacca tcaaaacttt atttacccta
    40561 tggcttaaaa gatcaactat aaagccttga tcgagttttg gataaagctc agcaatgcca
    40621 cttaaggtgg cgaaattctg tatatcttta aagcttaatt ttcccaaagc aaagctttct
    40681 aaaacatatc ttccattttc ttttttaata ggcataaaag taagtctttc gttaagatcc
    40741 ctttgtatgg ttcttgtatc gacattaaac tcttgtgcaa gctcttgggc gcttagactt
    40801 tccccattgt taaattttga taaaatctgc accaagcgta tgcttaattt gtcgtattct
    40861 ttcatgaaat ttccttgtgg gttaaaattc tttttaacaa acttacgcct tctatgccta
    40921 aaatttcatt tctaagtttt ttgacttcat ttaaacttgg ggctttcgca tgaacggctt
    40981 cattacggat ttcttgaatg atagtaagac tttttgaaaa aggataattg ataaattgag
    41041 ttaaactttt tcctaaatga cattggatat tttcatgtct gagtagaaat ttaatacttc
    41101 caagattggg tttttgggta aaaaaatctt taagtataaa agatttgcct tggacattat
    41161 aagctaaatc ataaaggcta ggatctttca tacaagcttt taaaagaact tttttggcaa
    41221 aagcgtaaat ttcatattct aaggttttag agtatttgac tataatactt gtaaaatcat
    41281 ttaaaagatc gttttcgctt tgcaaaagct ctaattctgc atgaatgata ttgcttatgc
    41341 tatcagagtg taagagataa aaaatccttt tgccaaaaac aaagcgtatg aaattttctt
    41401 gcatggctag gtattctttg cttttataca cacttagata atgcttttca tctcctaaaa
    41461 aataagaaca ctcttctttt aatctcacag gcaaaggata ggtgtaatga ttgccataga
    41521 tagcataggt gtgatcgttt ggtgtgatga aattggctaa aaatttatct cttaaacgac
    41581 taaaatcttc cctgaccaat tctcttaaat cactaataat aaaaaagtct tccacttcta
    41641 aatttttttc tttataataa ctaggaatca aactttcatc aacattttta gaaattttta
    41701 ccaccttagc gacaaataaa ttagcataat cgcttaaaaa gagttgcaag aaattttctt
    41761 catttgtact ttggtaaatt tcttctaagg aattttgctt ttcttgatcg ttgagttttg
    41821 atttgatttt gccaaaggca acttgggatt tctcttgtaa aatgcttaaa tgttgcttga
    41881 tgacatcttc ttgatagtag ggattataaa ggattaaaag gtggttcatg ctttgcctta
    41941 ttttaggatt tctttaaaag gcttagattt attatgagct tcaattaata aaattttaca
    42001 agtgtcatct agatattttt ctaatttttt attatctatt tttccattat tatataatat
    42061 ataaatttct ttaagaatta aagtgctaaa tcttataaca ttaattaaat tgatttcaga
    42121 aaggaaaact accggatttg ttataggatt tttacttttt atccatgcac caccagtatc
    42181 aattaataaa aaagtaccag atcctattaa aagcatttta tttaattcag gtatgttatc
    42241 ttttggtata cattctttcc attctttttt gtggtaaaat ttagctttta ttatatacat
    42301 aaaacgaatt agcattttat taatcataac aggaatagac atagtaactc catgcctaag
    42361 atcatatcct tgttcaaaaa cttgggttgc aatttgtgct agtgtttgtc tatgttgtcc
    42421 aaaatttcca aaatcacaaa gtaaaaataa attataaaaa ggcataggaa tgcctgcacc
    42481 tctttccttg cctccactag atccacacca atcagatgct aaatgtccaa accaattaaa
    42541 aaatccacaa aatattttag caataaaatt tcccccttgt aattcaaaag tatttgtatc
    42601 tatggttatg atttttccgt tgctgacaaa agttgaagta ttggtaaatt gatttactat
    42661 agatacaaat aacccgaaaa tatctggaga gtgacctatg ctttttaaat gatgattttt
    42721 catacttaaa ttatctactt ttccatttgt tccatttctt ccatttgtag tagtttgatc
    42781 ataattaatt ttaaatttgt tttccaaaaa cgctatacac ttttagttaa atctttgttt
    42841 ttgtctaatg ctttttgctt atcccaacca cataattgtg caaatttttg agtcattttt
    42901 tctaccgtct tatctacctt ttttcctaga tagctatctt taggatttcc aactaaaaaa
    42961 atgtccataa tgccagctat tgctccacat gttattgcta ttaaataatc atacttatcg
    43021 cactctgcat ttctatgggt aaattcatct tcaattcttt ttttaacatc tgataaattt
    43081 gaataagtga tcaaaaattt taaagaatct tcatttgagt ttattttttt aagtttaaat
    43141 atttttcaat tttttgacaa tatgtttccc aattgctata agtgttaaaa aaaattttcc
    43201 aatgaatcga ttgattgatt ttccttatat tctatattgc tcaaattttg atttttttct
    43261 gtgatactat tttgaatctg ttctatggtt aaacattatt ctttgatatt tttttcaatt
    43321 tcggataatt tattttgtat taaaaagatt tgttgttttt cggctaatat agccttttct
    43381 attttggtgt tttcttgtat tttatccata aaattatcct tatagatttt ttaatttaaa
    43441 aaaatttgaa agtttttcta aatccgacga agaaagattg tcattgcgct catacttatg
    43501 agtattttga ttataggtat agtattgttc tataaattga atatcatctt cttttagatg
    43561 attatttatt gttatcaatg aaagcgtttc tgggcaatat aaaagttttt ccctttcttt
    43621 aaaagtttca ttattttttg aagccaattt taataatttt attaattctt gtaaattttg
    43681 tgtatttgta ttacattgct caattaaatt attgatgata tcaataattt gggtaattgt
    43741 tttttgattt tctttgagaa tttcttgaat aataaaaaga cgtaattgtt gtttgttttt
    43801 attgtgatat ttttttgaag aatcaattag tggtaatttt attaattccc caaatcctag
    43861 taactccata attgatacag acatgccaat tgtcattcct gaaagatgta aaccgtttaa
    43921 tgatatatta ttttttgtag ctgtttcgga tataaagtta aaaatttgct gaatttcttt
    43981 attatcgtct aatattattt gatattcttt tttaatgatt tcttttaccc aatagatttc
    44041 tttaaggtct ttgattttaa aaatgtcttt gttttcatac aaaaaattat aaattttatt
    44101 atcttcaaaa tctatatcaa ttaagtcttt tattagcgaa attaaaatat atttgaattg
    44161 cataaatcta gattcttgtt ttatgatgtt tagcaaatct tcaaaactag aatgtttatt
    44221 atgtaaaaaa tcttgtattt tatacctt
//
LOCUS       DAPIVO010000006        43541 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.006, whole genome shotgun sequence.
ACCESSION   DAPIVO010000006 DAPIVO010000000
VERSION     DAPIVO010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 43541)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43541)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43541
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.006"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            74..745
                     /locus_tag="RJ239_000315"
     CDS             74..745
                     /locus_tag="RJ239_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDV7330469.1"
                     /translation="MINVLMIEDDPDFAQLLSEYLAQFNIKITNFENPKSALNVGIQG
                     YDCLILDLTLPGIDGLEVCREIRQKSNIPIIISSARGDLSDKVVGLQIGADDYLPKPY
                     DPKEMYARIMSLIRRTKRVEHTNNENINSAFKIDERRHEITYEDKVLTLTPAEFEILE
                     YLIQQHGYSVSREQLVSRCKNLKDKDSKSLDVIIGRLRVKIGDSSKSPKHIFSVRGIG
                     YKLIG"
     gene            742..1977
                     /locus_tag="RJ239_000316"
     CDS             742..1977
                     /locus_tag="RJ239_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDV7330470.1"
                     /translation="MTKNYSIHTKLIILFVVTFFLVCVLFIVLLKIEGNTYNEEESLK
                     QENLIKNLLISYENTSGVEIGAYLGNSGFNAIQNPNLVKAIRNNGQSLFKAGGELCTL
                     SSLKYHSNLYFDVQCKDFDGLYEENTSDRVYNLLLIGFFSFSLLVVFMYFSVLKSLEP
                     LKKLRRQVAEVANGEQPDFLDYQEDEVGKIAFEFQKAFKKNQELIQSRQLFLRTIMHE
                     LKTPIGKGRIISEMIKEDRQKERLIAIFLRMDSLINEFAKIENLFSKNYNLHFKPSRF
                     SAILEEAKEHLMIDDFNKVVKVDIRYDALINVDMEIFSVILKNLIDNALKYSNNGTCE
                     LFCCKECFTIKNPGKPLAEPIEHYLEAFTREKHNQVKGMGLGLYIVSEVCKLHNFDLI
                     YFYDDGKHCFKIFFGDKEK"
     gene            1977..2549
                     /gene="recR"
                     /locus_tag="RJ239_000317"
     CDS             1977..2549
                     /gene="recR"
                     /locus_tag="RJ239_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HDV7330471.1"
                     /translation="MVKGLEKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKL
                     AHNIENAIRFIKPCEQCGALSENELCEICSDEERNKNILCIVESPKDILTLEESQSYN
                     GLYFVLDELNEEKLEKLKQIILKLNISELIFALTHSINSDATIFFIEDKFKGLNLTFS
                     KIAQGIPSGVNLENVDLISLNKAMNFRTKI"
     gene            complement(2546..3082)
                     /locus_tag="RJ239_000318"
     CDS             complement(2546..3082)
                     /locus_tag="RJ239_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HDV7330472.1"
                     /translation="MKFLVLGIGNIMFADEGLGVHLCKQLEKNYKFTHSEFTLDFVDG
                     GTLALQLSYIIARYDRLIVLDCIEAQGASIGDVFFFPYDAMPNKISWSGSAHEIEMLQ
                     TLQYMELAGDLPKTHILACVPKRIEAMSFKLSDELIQGAKIMEKTLLDFLSKEGFAYE
                     KIADFSLQELADISYKNY"
     gene            complement(3079..3771)
                     /gene="cybH"
                     /locus_tag="RJ239_000319"
     CDS             complement(3079..3771)
                     /gene="cybH"
                     /locus_tag="RJ239_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase, b-type cytochrome subunit"
                     /protein_id="HDV7330473.1"
                     /translation="MQNKEEKLQRKAEYEFSIGLRLTHWVRAIAIVILIGTGYYLSYV
                     FQSPISNGEPVNFMQAKYRLVHQAVGFVLIACIIFKVYLFFCDKVSAKERRSVWDIFN
                     IKLWIEQVKFYIFLGKHPHLKGVYNPLQFVTYFFFYLVILGIILTGLILYTHTYHEGL
                     GGLLYHILRPLEAAMGGLADVRTYHRILMWVIMIFVPVHIYMAIFNAVKGKDGAMDAI
                     ISGYKFVKEEQH"
     gene            complement(3782..5497)
                     /locus_tag="RJ239_000320"
     CDS             complement(3782..5497)
                     /locus_tag="RJ239_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HDV7330474.1"
                     /translation="MSQKIIVDPITRIEGHLRVEVVVDDNNVVKEAYAGSTLWRGIET
                     IVKGRDPRDAGFMTQRICGVCTFSHYKAGIVAVENALGITPPLNALLTRTLMNAALFL
                     HDHIVHFYQLHGLDWADVVSALSADVKKASDEAFKYTSNPYATGADKLLEVQQRLKTF
                     VDKGNLGPFANAYYGHPTYRLSPEQNLIVLSHYLECLRIQRIIAQCMAIFGAKNPHPQ
                     SLTVGGVTCVMDLLDPARMGEYMVKFQEVQDFVNRAYYPDLVMAGKAYAHEASVLNDI
                     GVNNLYTFKEFQIGRDEWLFESGIIKNGDLSKVYEVEEDKITEEATHSWYADNEPLHP
                     YDGKTNPNYTGLVDGESVDHHGNNVHSKVFDTKGKYSWIKAPRYEGNPMQVGPLANVV
                     VNYAKGNQNVVPVVDEFLKETGLPLNAVFSTLGRTAARCIEAKIVANNALKAFNNLVE
                     NLKVDQSTCAPYVIDNSKEYKGRYMGHVPRGTLSHWCRIKNGVIENWQAVVPSTWNAS
                     PKDANGVGGSYEQCLIGLKIADVKQPLEIIRKIHSYDPCIACAVHVMDTKGNNLSEYK
                     VNVNL"
     gene            complement(5500..6639)
                     /locus_tag="RJ239_000321"
     CDS             complement(5500..6639)
                     /locus_tag="RJ239_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HDV7330475.1"
                     /translation="MIDYHQIESRLSALEKLPSLKDNDSITKALEKSGFSRRDFMKWA
                     GAMTAFLALPASFTPMVAKAAELADRLPVVWLHMAECTGCSESLLRSDTPTIDSLIFD
                     YISLEYHETVMAAAGWQAEENLESAIQKHKNKYILMVEGGIPMGDTEHFLTIGAHGKT
                     GYELSKMASENALAIFAIGTCSSFGGIQAARPNPSNAQPLSKVTSKTVINVPGCPPSE
                     KNIVGNVLHYLLFGELPALDVYNRPKWAYGLRIHDLCERRGHFDAGEFVHAFGDEGAK
                     QGFCLYKVGCKGPYTFNNCSRERFNQHTSWPIQAGHGCIGCSEPNFWDTMGPFEEPMA
                     SRKFDTVFGLGADSVSDKIGIGVLTLTGVAIAAHAVISSMQKDKE"
     gene            complement(6760..8601)
                     /gene="mnmC"
                     /locus_tag="RJ239_000322"
     CDS             complement(6760..8601)
                     /gene="mnmC"
                     /locus_tag="RJ239_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HDV7330476.1"
                     /translation="MKKAKLIFKDNTPFSLDFDDFYFNFKDGLNESKFVYTHSFEWKN
                     QENFIIAESGFGIGLNFFLTLKRFLETTPSKRPKKLFYISVEAFYIEKEQLREIYQKL
                     EFYEEFKELLEQFLKFYPKAKEGIYRFYFEDCFLDLVFEDIAVLKELDFKADVWYLDG
                     FSPNKNSQMFDENLIFEVARLSKKNTQICTFSSASFLQKNLKKYGFRVEKTKGFRKRE
                     MIKAYLENELEFKDKEAYFSRTFSSLKNKKVAIIGAGISSAVLAYELSLRGFEIDIFE
                     KHLELGKGASGNESGILSSLILKPKVNLGEFSELSFIEASRFYRQILDLEFKGVVEFA
                     HNDLMQERFDTQRENVLFKISKNQAFLEEGGVIFPKKLVKNLFEKSKACIYFNHEFQA
                     YKFENGCFSLKFKNDVVKSDYAVLIYAMGADAKDFVFYDEMKLSKVRGQVTHLKPFLD
                     TPFPLSSKAYICPVKDDLQVIGASYDRLNASLESKEEDDKQNIENIADFMDKNTKLEI
                     IGSKVGFRSYSSDRFMIVGNAYDEAFYKEEYKALLWTKNKEQKPAKMSCNLYFNFAHG
                     SRGFSTSVLAARYLCALINNEPLCLEKKYIHAIHPARFLIRKLKKGL"
     gene            complement(8598..10577)
                     /locus_tag="RJ239_000323"
     CDS             complement(8598..10577)
                     /locus_tag="RJ239_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HDV7330477.1"
                     /translation="MAKIFVFLVFVFTTLFGVYENELANFDKNFIGSKSEVQVKFHHQ
                     LKSLYIQSVINEDEKTKIEILKRLIISSNTLNLDDKSYANELKESGISETSINALRKA
                     VIKDIKVQNISQDTEKSTFEPIKTVQKNEKKSSNEQIKNTEKTNSKTSQAPKSSIVSK
                     AKSDDKIYVLKSSKTNQGVEFELNADLDKDQLKSFALDEKGNYRFISDFDGVLEGGKK
                     EFKFDDYRLVISQFNPKTIRIVVYAKEKIPIDISFKEEKIIFSKETTSQKKTEQVSKI
                     SEKKQDQKTEIKTKVLETKKQDKKTNNEKENQEPLYVLDVDKISNAVVLNLSDDLDEK
                     EIAVFDTKDQKFRYVVSFKGVLEGNRKSFTFGQNVITVTQYNPKTVRVVLSAPKEFKL
                     LKELDNNNLTLGFYIQTTNQNANKKATQSSSKTLNTNYKSGKLVVIDAGHGGKDSGAL
                     SDKKGSLKEKDIVLSTALKLGNELKKRGYKVLYTRSSDKFINLRDRTKYANDKRADLF
                     ISIHANAAPNATKAKSSEGVETFFLSPARSERSKKAAEKENQGDFEEINYFSKQSILN
                     FLNREKIVASNKLAIDVQKNILTQTRKKYKIVDGGVREAPFWVLVGAQMPAILIEIGY
                     ITHPNEGKRIANKAFQDLLVKGIADGVESYFYNNR"
     gene            complement(10577..11668)
                     /locus_tag="RJ239_000324"
     CDS             complement(10577..11668)
                     /locus_tag="RJ239_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HDV7330478.1"
                     /translation="MNLQPLQIGKHTIKYPIFQGGMGLGISWDRLASAVSLNGGLGII
                     SSVGTGYYEERKYASKELNAKPYGSENFYSRKGLQALINNARKVCGDAPLGCNILCAS
                     NDYARIARDACEVGFNVIVSGAGLPTNLPEFTADFPDVALVPIISSAKALKIICKRWQ
                     SRYNRLPDAVVLEGPKSGGHQGFTYEQCLDPNYQLEKLIAPVVEEAKNWGSFPVIAAG
                     GIWDKKDIENAISLGASGVQMGTRFIGTFECDASEEFKSVLLASKEEDIELIKSPVGY
                     PARGVRTNLLNLVDKRMGPKINCISNCVAPCGRGKEATKVGYCIADRLFDAWSGKKET
                     GLFFTGANGYRLDKLISVKELMEKLVNGE"
     gene            complement(11665..12870)
                     /locus_tag="RJ239_000325"
     CDS             complement(11665..12870)
                     /locus_tag="RJ239_000325"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HDV7330479.1"
                     /translation="MDIKKILAEVKRGCAELIDEERIENLIKNYYEKGENFFIKAGFD
                     PTAPDLHLGHSVVLTKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLI
                     NAKTYKTQVFKVLDKEKTQIKFNSTWLNELGAAGIVELTSTFSVARMLERDDFTKRFK
                     EQSPISICEFLYPLLQGYDSVALKSDIEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIM
                     MPLLEGLDGVNKMSKSLNNYIGVTEKANDMYAKILSISDELMFRYYELLSQKSLEEIA
                     QIKKDIEQGNLHPKKAKENLALEITERFHSKEEANNAKSEFDRIHSQNALPSDMAEFE
                     IQGKIWLAKALVECGLESSTSAARRSISANAVSVNSQKVSDEQMYLEQGEYILQIGKR
                     KFAKLKVKE"
     gene            complement(12882..15077)
                     /locus_tag="RJ239_000326"
     CDS             complement(12882..15077)
                     /locus_tag="RJ239_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HDV7330480.1"
                     /translation="MKPIDEELLLEQLIDNVKNCKDLEAAKALLFEICGHDAILEKAV
                     DYCIFCHEGQFRKSGEPYAVHPILVATLVGFLSENKSNILAALLHDVIEDTNCTEEEL
                     REQFGSEVLKLVLGLTKIIEIREDNLISSKSKKSLTKSALTFRNMLLASIEDVGVLIV
                     KLCDRLHNMLTLDILREDKQKRISEETLVVYAPIAHRLGISSIKNYLEDLSFKYLMPD
                     EYKLIDNYINSNNQEMQLGLNEFISKIELLFLSNGFRQGSFEIQKRIKHSYSIYLKMQ
                     RKGIGIEEVLDLLGVRILVEKVSDCYLALGILHTHFNPLVSRFKDYIALPKQNGYQTI
                     HTTLFDAKSIIEAQIRTFDMHKIAEFGIAAHWKYKEDGSVVAPRLDWLTDISMQSINN
                     LENAEDYNAIELYEYAKDSLYVEDVAVYSPKGEIFTLPRGATVLDFAYEVHTKVGLHA
                     KSAYVNRIKVPLLTELKNGDIVRVVTSNDKFYRCSWIDSVKTGKAKASIREFCKQKIR
                     EINLASSINMLSFIFGVDKNRIETWIEKENLVRRIRQVATDSAYLKDIVNGLKKYAKK
                     SYWFDKYEIKEQKIGNFTLYCNHKIANVDFDFCCHPKRGDAVLAFVKGGNAIVHHKLC
                     DRADKMIDNNQDMVFIKWDSNIPKSYKLIFSLENKKGVLAEFLAFLAKMQINLLTINL
                     SSDLNSAVDYFEITMEIPDNINPDSVKDRLKSRCKILDFTSLNDAYKES"
     gene            complement(15061..15285)
                     /locus_tag="RJ239_000327"
     CDS             complement(15061..15285)
                     /locus_tag="RJ239_000327"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HDV7330481.1"
                     /translation="MDKRIEEVAAKALEKMGNDRYRLSLVVAKRAEQLANGATPLVDF
                     DKNKNKLADIALYEIAENKITLEGLVETNR"
     gene            complement(15296..16015)
                     /locus_tag="RJ239_000328"
     CDS             complement(15296..16015)
                     /locus_tag="RJ239_000328"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HDV7330482.1"
                     /translation="MQERKRVLVKFSGEALAGENGFGIENSILKFIASEIKELIKNQI
                     EVGIVIGGGNIIRGVSAAKGGLIKRTSGDHMGMLATVINAIAIQEALESSGLEVRVQS
                     AIQMEAFCETYIMRRAQRHLEKGRVVVFAAGTGNPYFTTDTTAILRAVEIDADMVIKA
                     TKVNGVYDKDPKQFDDAVFLNTLSYDEAMQDNIKVMDDTAIALAKDNKLPIVVCNMFE
                     EGNLLKIIQGDTSLCSTVKNN"
     gene            complement(16067..17260)
                     /locus_tag="RJ239_000329"
     CDS             complement(16067..17260)
                     /locus_tag="RJ239_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDV7330483.1"
                     /translation="MRKNILIFFCFFLFVDISLANAINEKTKSLEENKRIQEQLNKKL
                     EDLASDILNGEKSLKDLSLQIESLNSQTSKLEASAKAQNQELNTLTSQNEDLLKSKSN
                     MEGKLISLMAKDFAYDLPIPQGYIESEESFMAFEILGSLNKVLNEEIFKISKDYEGVS
                     RLIDDKQAQIKKINESLKDYNAQLAKLQSLKQKQISEINKQKTDRAIYAKKLDDLQAQ
                     QEELRKTLNQLKIINDKEDANSNKNDTKIVKNNQKIRQLGSSYQGSSVKRYTGKKTIA
                     PLDSFTVKQKFGNYVDPVYNLKIFNENVVLRSNKSDAVVKNVLDGKIVFAKDTSMLAR
                     VVIVEHDNGIHTIYAHLDKIAPNIKVGKNIKKGAVVGRIKNDLTFEVTQKNFHINPLE
                     LISLN"
     gene            complement(17257..18063)
                     /locus_tag="RJ239_000330"
     CDS             complement(17257..18063)
                     /locus_tag="RJ239_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HDV7330484.1"
                     /translation="MKFFKTHLSLILPLLFMMFAFEFILITNATLKHYEELVNKDYNI
                     IVVSKTELDQNVVKTKVPFFAGLESLDPKDLIDRLKNDVSEKNLKVLKDSLPKFYTLK
                     LNSLPDQNELNSIKNQLLNIVGVSKVETFSKTHDKIYSLLILMKFVFWLFLFIIILLA
                     FVLFLKQMRIWLYEHTDRIEIMCLFGAPFWFRSFMLYKVVVVDCFIAFVILLAFFTQI
                     FDLSIIQESLKAVDIIFPPINFILHLTLIFLATLFICLLCVNTVMFKVKR"
     gene            complement(18050..18715)
                     /locus_tag="RJ239_000331"
     CDS             complement(18050..18715)
                     /locus_tag="RJ239_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7330485.1"
                     /translation="MPNLIQANKLTLGYDELVIKEASFAFKDDDFVFITGKSGSGKST
                     LLKSFYGDLEPISGKLEVCGSLMNKIGNLELLKLRQRIGIIFQDYKLVQEYSVEKNVM
                     LPLMIKGYSKKVCHDQATKLLKHVNLTFKADKLPNQLSGGEQQRVAMARALAHNPKLL
                     LCDEPTGNLDEYSSDIIWTLLKSARELLGTCVIVVTHRIPSNLRVDYRRFNIENGKMN
                     EIF"
     gene            complement(18785..19963)
                     /gene="trmB"
                     /locus_tag="RJ239_000332"
     CDS             complement(18785..19963)
                     /gene="trmB"
                     /locus_tag="RJ239_000332"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HDV7330486.1"
                     /translation="MPNFKSKKIKEINLPYSKDDVEFLWLAKNDNVSLIYTKVQEESF
                     FLQIKKAQNGFVIKGDKHTKPSKIGYLQKALKIFKEGFCEDIINEAFGLKNNALIEKT
                     PFIVDNFDELLSRLQGKIYIEIGFGSGRHLLYQAKENPNVLILGVEIYNPALTQVAKL
                     AKAQNVNNILLIQSDARLLLSVLKSKSVEKIFLHFPVPWDKKPHRRVIGKDFCKECAR
                     VLVQNGRFELRTDSFEYFNFTLEQFLTFPAPKFSLRKNENLEISSKYEDRWKKQEKNI
                     YDLWVWNFNQECKNYELNEFNLSSVEFSKEDLKKIEQNFKNITIKKDDFFLHFESIYK
                     QDENLLLKVAFGAFNKPEHCYLHLDKTIDFAFKEPFKIQENIKAINELKEILKVQFKI
                     "
     gene            complement(19963..21198)
                     /locus_tag="RJ239_000333"
     CDS             complement(19963..21198)
                     /locus_tag="RJ239_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HDV7330487.1"
                     /translation="MMKRFRLSFYLSFLTLLLSACSVSQMNSLASSKEPAVNESLPKV
                     ESLKSLSDMSNIAFEWEPLYNENIKGFYLYRSSDENPDFKLVGTIKDKFQTHYVDTKL
                     EPGTKYRYMMKSFNEQGQISEDGKVIEVSTAPRLEAVPFVQAVTNLPNRIKLIWRPHP
                     DFRVDSYIIERTKGDDKEFKKIAEVKNRLNAEYIDSDLKPNENSSYRIIAVSFNGIKS
                     GSSQVVSSTSKALPPQVEHLSASTDGSSKIILTWDAPTYEDFSYYKVYSTSSSFLPFS
                     VLAKTDKNSYEDIVEGAGKSKYYKVTMVDKDGLESPMPKDGVEGKTLGNPLAPSIILA
                     QSTSEGINLEWSDNDTRAVEYEVRRYGGEQNAVFKGIKEKRLKDVKALPGVEYSYEVI
                     AIDSAELRSEPSSKVKAAQ"
     gene            complement(21143..22111)
                     /locus_tag="RJ239_000334"
     CDS             complement(21143..22111)
                     /locus_tag="RJ239_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDV7330488.1"
                     /translation="MQTFLVDENSRLDVFLAKKLNQSRNQVALLIEKDCVQVNDKIQD
                     KNSFKLKNGDIISIASLKLCNEIKPQFEVDFDIDVLYEDEDLLVLNKPSNLVVHGASS
                     VKNATLVDWLIEKKYTLSNLGGEIRAGLVHRLDKDTSGAILIAKNNFTHQKLSEQLAD
                     KSMGRIYLALIDLPLKEDKIIVEKFLMRSPSNAIKKIAIDKENKFSKNAKSAFINVVK
                     TENLTLMAAKLFTGRTHQIRAHLASLNRYILGDSLYGYKGKYDCRIMLHAYFLYFIHP
                     KTKEQIFVKAPLMEDFKNIMFEQINLGENDEKISLEFLLEFFNSFA"
     gene            22189..23289
                     /locus_tag="RJ239_000335"
     CDS             22189..23289
                     /locus_tag="RJ239_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HDV7330489.1"
                     /translation="MFRLDRRILTHFDYMQPILFLPIILISFFLIFEANPFLAEKQFV
                     YACVGLFAFMVFFFFPIRKFIWIIPVAYWINIFLLLSVDIFGVEKLGAKRWLEIPFTH
                     FTIQPSEIFKPSFILMLAYLIYQNPPPKNGYKLKQFIKLSFYIILPFLLIAKEPDLGS
                     AMVLLLVGFGVLFIMGVHYKIWLSIVIAISVSSPIIYTHLLKPYQKQRIHDFISEKPS
                     YQVAQSMIAIGNGGLTGKSQDEATQTHFKFLPISTSDFIFAYMIERFGFIGGLTLIIF
                     YILLIFHLLSLNYKLKDDYFARVAINCVALFIFIYAAVNISMTIGFAPVVGIPLPFFS
                     YGGSSFTIFMIFFGILQHLITFRYFWTDIKAK"
     gene            23343..23419
                     /locus_tag="RJ239_000336"
     tRNA            23343..23419
                     /locus_tag="RJ239_000336"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:23377..23379,aa:Ile,seq:cat)
     gene            complement(23528..23603)
                     /locus_tag="RJ239_000337"
     tRNA            complement(23528..23603)
                     /locus_tag="RJ239_000337"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(23568..23570),aa:Phe,seq:gaa)
     gene            23743..25086
                     /locus_tag="RJ239_000338"
     CDS             23743..25086
                     /locus_tag="RJ239_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HDV7330490.1"
                     /translation="MKQFGLDRRTFKILLAGYIIIALFGALLLHSSWAHTTPIDFLDA
                     FFTSTSAVSMTGLVIKNTAVDFTLAGQIIILALVQIGGLGYMGIGLFVYILIRKKVGF
                     SARNLLKESLFYPSMDGLFKFFKKVLLFIFTIELIGAILLTMRFALEMNFKKALWFGI
                     FHSISAFNNSGFTIFEHGFIAYKHDIAINLIITSLIIIGGLGYFVLVELYFFQRKKLQ
                     NLSLHTKMVVVASIFLIFSSTLIIFAFEYSNPQTIGHFSFFDKILSSYFIAINYRTAG
                     FNTLDMGHLHDASLFFGSLFMVIGGAPGGTAGGMKVTTVMVLLLYAYWSIRDGRVRIF
                     GHEIPRETISKAFIIAVGSAVYIVIAVILLSLLESKFDFIALLFETSSAFATVGISVG
                     NGGTLSLCALFSDPSKVIIIIMMLSGRIGVFAFLLSVFKQDKAIHLKFPEGKVNL"
     gene            25097..25747
                     /locus_tag="RJ239_000339"
     CDS             25097..25747
                     /locus_tag="RJ239_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HDV7330491.1"
                     /translation="MKNLNYGIIGLGKFGSVVADELIAGGHTVIVADKDEEALKSIQN
                     PPSYAYILDSTNISALKEAGFHDVEVVIVSIGENVEKSILTLMALKDIGVKNIIAKAT
                     SNIHGQILSKLGATKVIYPEKESAKRLVKEFLTKDADYEVFDLSANTIRAIKINIDEK
                     LAGNSLKHVAQNMKVISYKKLNSDWEILPDLETTTVYSGDVVILLGTVKELREFEH"
     gene            complement(25744..26415)
                     /locus_tag="RJ239_000340"
     CDS             complement(25744..26415)
                     /locus_tag="RJ239_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthetic enzyme MqnA/MqnD family
                     protein"
                     /protein_id="HDV7330492.1"
                     /translation="MIFGKIDYINLLPLHIYLKKYPLPNGYKASMEYKKGVPSKLNKD
                     LFYRRIDAAIISSIESARKKYKNLDLGICANKRVLSVLVEKNTSNAKDPSSATSNALA
                     KVLKQDGKVIIGDKALKLYLKDPSKYIDLCAKWHEKTGLPFVFARFSCVQKKALYKQI
                     LKKFPKTKIKIPYYILQNYAKTRDLDIKDVRYYLDEVIYHKISTKEKTALKRFVKACK
                     ALNLA"
     gene            complement(26421..27047)
                     /gene="upp"
                     /locus_tag="RJ239_000341"
     CDS             complement(26421..27047)
                     /gene="upp"
                     /locus_tag="RJ239_000341"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HDV7330493.1"
                     /translation="MKNIHCINHPLIEHKLGILRAKETKPFQFRMLIDEISSFLLFEA
                     SKDFSLKEIEISTPIQKTTVKKLDEKIMICPILRAALGMLESVFKMIPDASVGFLGFV
                     RNEETLKADFYFQKLPKDAKKRTAIVIDPMFATGGTAIDACNFLKSQGVKKIKFISIL
                     AAPQGLKKFSQMHDDVEVFVACIDEGLNEKGYIIPGLGDAGDRVFNTL"
     gene            complement(27044..28279)
                     /locus_tag="RJ239_000342"
     CDS             complement(27044..28279)
                     /locus_tag="RJ239_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDV7330494.1"
                     /translation="MNLKEEALKYHLGGKIDIVPSKPMATSYDLSLAYSPGVAEPCLE
                     IAKDNELAYTYTNKANLVAIVSDGSAVLGLGNIGAQASKPVMEGKACLFKKFANVNAY
                     DIEINVHSIEEIVNFCKALAPTVGGINLEDIAAPKCFEIEAALQDLGIPVMHDDQHGT
                     AIISTAGLMNAMEISGKKFKDIKVVVSGAGAAGIASAKMYRNLGVENIILVDSKGVIS
                     KDRNDLTPQKLEFAVDSKEKTLKEVLKGADVFLGLSAPKILDDEMVLSMAKDPVIFAL
                     ANPIPEVMPEDVARLRKDAIVGTGRSDYPNQINNVLGFPFIFRGALDVRASKITENMK
                     VAAAKALADLAKLPVSDAVKKAYNLSTLEFGRDYVIPKPFDERVKAAVSTAVAAAAVK
                     DGVAKVKNFDEKAYFESLK"
     gene            complement(28281..29672)
                     /locus_tag="RJ239_000343"
     CDS             complement(28281..29672)
                     /locus_tag="RJ239_000343"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDV7330495.1"
                     /translation="MHEKLTTRFAPSPTGYLHIGGLRTALYNYLYARKNGGNFLLRIE
                     DTDLKRNSKEATKAIIEAFKWCGLEHDGEVTYQSERFDLYKEYVKKLLDEGKAYYCYM
                     SKEELEELRAKQEAAKERPRYDGRYREFTGTPPQGIEPVVRIKAPQSGEIVFEDGVKG
                     EVRFKAEDIMDDFIIARSDGTPTYNFTVVIDDALMGVSDVIRGDDHLSNTPKQIVLYE
                     ALGFKIPKFFHVAMIHGEDGKKLSKRHGATDVMEYKEMGILPQALLNFLVRLGWSHGD
                     DEVFSLEDLKKLFDPYHINKSASCYNAKKLEWLNAHYIKTLPFEEINRQLKDLGFDLS
                     VYEKAGFLLDLLRERAKTLHDIINGAKSIVNAPQNYDENAVQKFVNKNNLELLQAFAN
                     TLKDQKTGKDFEDFTNDFLEKKEAKLKDLAQPIRIALTGSAVSPSIFEVLEFLGVDEC
                     KKRIDNFLKVRGK"
     gene            29737..30552
                     /gene="salC"
                     /locus_tag="RJ239_000344"
     CDS             29737..30552
                     /gene="salC"
                     /locus_tag="RJ239_000344"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase SalC"
                     /protein_id="HDV7330496.1"
                     /translation="MKKILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKAL
                     KIDRNKALGVLINEKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSK
                     NQSYEQFRTNFKKDLEKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANI
                     YLSNNPQTLENIKNTKKTILKPQNASLNTSNADPRLLGLLSQIPVGGFSPVLNGKNGY
                     ELYEVKSKDGTQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEYLR"
     gene            complement(30590..31921)
                     /locus_tag="RJ239_000345"
     CDS             complement(30590..31921)
                     /locus_tag="RJ239_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HDV7330497.1"
                     /translation="MEIKSILIANRGEIALRALRTIKEMGKKAICVYSEADKDALYLK
                     YADASICIGKARSSESYLNIPAIIAAAEIAEADAIFPGYGFLSENQNFVEICAKHNIK
                     FIGPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSDGALAGAEAAKKLAKEIGYPVILKA
                     AAGGGGRGMRVVENEKDLEKAYWSAESEAMTAFGDGTMYMEKYIQNPRHIEVQVIGDS
                     FGNVIHVGERDCSMQRRHQKLIEESPAILLDEKTRTRLHETAIKAAKAIGYEGAGTFE
                     FLVDKNLDFYFIEMNTRLQVEHCVSEMVSGIDIIEQMIKVAEGYALPSQESIKLNGHS
                     IECRITAEDSKTFLPSPGKITKYIPPAGRNVRMESHCYQDYSVPAYYDSMIGKLVVWA
                     EDRNKAIAKMKVALDELLISGIKTTKDFHLSMMENPDFINNNYDTNYLARH"
     gene            complement(31923..32378)
                     /gene="accB"
                     /locus_tag="RJ239_000346"
     CDS             complement(31923..32378)
                     /gene="accB"
                     /locus_tag="RJ239_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HDV7330498.1"
                     /translation="MTKEEIKELVNLFAEANISKIKIKEQDGFEIELERDMCCDVPAP
                     VCPPVPAPQPINVSVVNEAQPSQSVKSNKPSINSPMVGTFYQAPSPGAAPFVKVGSTV
                     KKGDTIAIIEAMKIMNEIEAEFDCRIAEILVADGQPVEFGMPLFAVEKL"
     gene            32526..33086
                     /locus_tag="RJ239_000347"
     CDS             32526..33086
                     /locus_tag="RJ239_000347"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HDV7330499.1"
                     /translation="MGLKADNWIRKMALEHKMIEPFCEANIGKGVVSYGLSSYGYDIR
                     VGREFKIFTNVNSTVVDPKNFVEENVVDFEGDVCIVPANSFALARTIEYFKMPDNVLA
                     ICLGKSTYARCGIIVNVTPFEPGFEGHITIEISNTTPLPAKIYANEGIAQVLFLQGDE
                     KCDTTYKDKKGKYQAQTGITLPRILK"
     gene            33136..34140
                     /gene="pseB"
                     /locus_tag="RJ239_000348"
     CDS             33136..34140
                     /gene="pseB"
                     /locus_tag="RJ239_000348"
                     /EC_number="4.2.1.115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (inverting)"
                     /protein_id="HDV7330500.1"
                     /translation="MFNGKNILITGGTGSFGKTYTKVLLENYKPNKIIIYSRDELKQF
                     EMASVFNAPCMRYFIGDVRDKERLSAAMRDVDFVIHAAAMKHVPIAEYNPMECIKTNI
                     HGAQNVIDACFENGVKKCIALSTDKACNPINLYGATKLASDKLFVAANNIAGNKQTRF
                     GVTRYGNVVGSRGSVVPFFKKLISEGAKELPITDTRMTRFWISLEDGVKFVLSNFERM
                     HGGEIFIPKIPSMKITDLAHALAPNLSHKIIGIRAGEKLHEIMISSDDSHLTYEFENY
                     YAISPSIKFVDKDNDFSINALGEKGQKVKDGFSYSSDNNPLWASEKELLEIINHTEGF
                     "
     gene            34142..35272
                     /gene="pseC"
                     /locus_tag="RJ239_000349"
     CDS             34142..35272
                     /gene="pseC"
                     /locus_tag="RJ239_000349"
                     /EC_number="2.6.1.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine transaminase"
                     /protein_id="HDV7330501.1"
                     /translation="MLTYSHQNIDQSDIDALTKALKDEILTGGKKVDEFEEALCEYVG
                     VKHACVLNSATSALHLAYTALGVQEKIVLTTPLTFAATANAALIAGAKVEFIDIKNDG
                     NIDEKKLEARLLKDSKNIGAISVVDFGGNSVEIDEISSLAKKYNIPLIDDASHALGAL
                     YKSEKVGKKADLSIFSFHPVKPITTFEGGAVVSDNEELIDKIKLLRSHGIVKKRLWDS
                     DMVELGYNYRLSDVACALGINQLKKLDHNLEKREEIASFYDKEFEKNPYFSTIKIKNY
                     KKSSRHLYPILLFPEFYCQKEELFESLLHAGIGVQVHYKPTYEFSFYKKFLGEIRLQN
                     ADNFYKAELSIPCHQEMNLKDAKFVKDTLFSILEKVKKGYCG"
     gene            35265..36572
                     /locus_tag="RJ239_000350"
     CDS             35265..36572
                     /locus_tag="RJ239_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4910 domain-containing protein"
                     /protein_id="HDV7330502.1"
                     /translation="MDKLDFRSQDFSQTGKAMYELACELFPIPRSITGQGFRDSLEIL
                     NKTLGGGILKFHSIKSGTKVFDWIVPDEWNVKEAYIITPEGEKICDFKKHNLHLLNYS
                     EAIDQEIELEELQDHLYSIEEMPDAIPYVTSYYKRRWGFCLTHNERKKLKKGKYKVYI
                     NAKHDENGVLDYADFILPSTQNSKDEILISTYLCHPSMANNELSGPVVAIFLAKWLLS
                     LKERKYNYRFVIIPETIGSIVYLSKHLEHLKKHVKAGFVLSCLGDDHAYSLIHTPKKN
                     TLSDKVALHTLKNKKNFKAFSFLDRGSDERQYNAPLVNLGIVGVCRTRYLEYEQYHTS
                     KDDLNFISEKGLMGGLQSIQEMILNLEINAVYENTIVCEPNLGKRGLYHTLSTANDIP
                     LACNFLAYCDGENDIIDIANILNMQAYEFKELLKKIKFYGLAK"
     gene            36569..37359
                     /locus_tag="RJ239_000351"
                     /pseudo
     CDS             36569..37359
                     /locus_tag="RJ239_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858419.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside N(3)-acetyltransferase"
     gene            37380..38171
                     /gene="legH"
                     /locus_tag="RJ239_000352"
     CDS             37380..38171
                     /gene="legH"
                     /locus_tag="RJ239_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase LegH"
                     /protein_id="HDV7330503.1"
                     /translation="MKYLLEFENKKYSTYDFIETFYKLGLQKGDTLCVHTELFNFGFP
                     LLSRNEFLQTILDCFFEVIGKEGTLIMPTFTYSFCKNEVYDKINSKTKMGALNEYFRK
                     QTGVKRTNDPIFSFAIKGAKEELFLKDTTSCFGENCVYEVLTKENGKYMTFGGQGHTL
                     THYAEEQFNVFYRYHKIFSGILIDENNISYNKTISYYVRKLDISSEPNLINIINIVNN
                     TKNFKKNNFAGDHINIYNAKEYIEILWKKLDINQTILIENYDTIY"
     gene            38202..38432
                     /locus_tag="RJ239_000353"
     CDS             38202..38432
                     /locus_tag="RJ239_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDV7330504.1"
                     /translation="MEKQFYEILENILETKVDENTNLSMENCKNWTSLAHIDIIMSLE
                     EEFEIKFNKEDLSLLKSQSALLEKIQTLKAEK"
     gene            38429..39322
                     /locus_tag="RJ239_000354"
     CDS             38429..39322
                     /locus_tag="RJ239_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDV7330505.1"
                     /translation="MKENIEKLFQAIAQKNPIHSKYLKKIEFSQEDEEEFDKLISYYI
                     QDGISIKEQCDCYLLILNDTLEETKFFIENGAYRYSSFDEVKDKVYFNESYMKQYMIG
                     LALSSFVWITHIKVRKYFSQYLQNFTPKTTYFEIGPGHGEYFARAVKSGKFSAFYGLD
                     ISPTSCELTQKMVKQQVGGLITKCDFLCQDFFTYDFDKKADLIVIGEVLEHVEKPLEF
                     LKRSKELLSDGGEIFATIPINAPAIDHIYLFSHPDEVKDLIEKSGLKFKAYECFMAND
                     YSLEKALKFKNAITMAVVLNA"
     gene            39315..39731
                     /locus_tag="RJ239_000355"
     CDS             39315..39731
                     /locus_tag="RJ239_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDV7330506.1"
                     /translation="MLNTTLNLPLHHIGVACKNLEKERECFFKLGFYKESEFIDEKQG
                     VRGEFIIPCNEAFPQYRFELLQNLNDKGPLDSYLKNNTKMYHLAYESKNIAQDLILLE
                     QQGGICIVPIMQASYFAKLCFIMMPNRLLIELVELK"
     gene            39728..41290
                     /locus_tag="RJ239_000356"
     CDS             39728..41290
                     /locus_tag="RJ239_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDV7330507.1"
                     /translation="MNLFSPHLKRNELIKFAKELDFSKSQDLLINVHRNHAFEGVQSI
                     IAPFLHFANLRAEFNFSSYDDSLSFDNFKEASLELLWLDLTRYKNNVQNFIEERLLEL
                     RKISQNPILVLSLGEFKTDKKILNCEIFNIEKLIKEYFDEEDILDLAKEELTGSKLNN
                     KALIFLAQILGLSLIPALVKPALKALVLDLDNTLYQGILGEEGIDNLNLSPLHKTLQE
                     KIKTFKKQGFLLALASKNEEKDAKKLFEIRKDFILQWDDFDARMINWEPKGENILKIA
                     KKFNINTNAMLFIDDNIAELENTKITGVKTLLCDENILYKIKLFPNLLKLSNTKEDQI
                     RAKDIAANALREELKSLSDEEYFQNLEISLNFSKNDLQNIPRISELLGKTNQFIANYT
                     RLNQEKVAQHMQKELIVSVSMSDKLSDSGIIAIFVFSCKEGNLFIDDLCISCRALGRK
                     LETRMFFKAFELALHFFDLKNNNARLYYQKGERNMPFLSFLEQISKEFEKNSALIPFQ
                     NLNFKGLIIHEN"
     gene            41280..42341
                     /locus_tag="RJ239_000357"
     CDS             41280..42341
                     /locus_tag="RJ239_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HDV7330508.1"
                     /translation="MKTRFDKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKK
                     VIGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACY
                     LHQLLNLSSKTVAFDLGQACAGYLYGLFVAHSLIQSGLGKILLICGDTLSKFIHPKNM
                     NLAPIFGDGVSATLIEKTDFNEAFFELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLM
                     QTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKVDEKDIAFHLFHQSNAYLVD
                     CIKEELKLNDDKVPNFIMEKYANLSACSLPTLLCELDTPKEFKASLSAFGAGLSWGSA
                     VLNFKDLYTKNILIYTKEK"
     gene            42341..42562
                     /locus_tag="RJ239_000358"
     CDS             42341..42562
                     /locus_tag="RJ239_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDV7330509.1"
                     /translation="MTKTEFLEELKEAMHRDEDLNEDMLLDDIDEWDSLAFVSVMVLY
                     KNLFTLKITAEDLKNCQKVSDLINLAKLD"
     gene            complement(42576..>43541)
                     /locus_tag="RJ239_000359"
     CDS             complement(42576..>43541)
                     /locus_tag="RJ239_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HDV7330510.1"
                     /translation="DVEKYSAYKYFQEEDIENIKNLLNQFHFSYGEINNDNALFLANS
                     LVKHVENLKMQNKLDHNFKLNFTSTFIPPNGDYQNYGIMAAIDHINALKDLVKRFPKF
                     ADLPKIYGGGSYGGYLSLLIAKIAPWYVDGVIDNSGSALPPLNYILGREMEHSYGDYY
                     EDFPHNRIIFFLKTHWTRKENSPYFFNNENYFIRTLLNKDHLILQSQKNKNIIYVSYH
                     SDKDPLTPANFKQQTMQILKILGYDVSLNLIDENKIDGKFIKNLDHGCGIPDKALFRK
                     ELPLMLEKLQKRKSFMQENSISYPCGNKVFIFKDVGDKFELVIKD"
BASE COUNT        14759 a         7567 c         6093 g        15122 t
ORIGIN      
        1 ataatttatc aaattttaaa taaaattatg taaagatttt aaagactaca taaaaattta
       61 caaggacact agaatgatta atgtgttgat gatagaagat gatcctgact ttgcacaatt
      121 attatctgaa tatttagcgc aatttaatat taaaatcaca aattttgaaa atcctaaaag
      181 tgctttaaat gtgggtattc aaggctatga ttgtctgatt ttagatttaa ctttacctgg
      241 aattgatggt cttgaagttt gtagagaaat ccgacaaaaa agcaatattc ctattatcat
      301 ctcatcggct agaggtgact taagcgataa agttgtgggg cttcaaatcg gtgctgatga
      361 ttatctacca aagccttacg atccaaaaga aatgtatgca aggattatga gtcttattcg
      421 tcgcacaaaa agagttgaac acactaataa tgaaaatatt aactctgctt tcaaaattga
      481 tgaaagaaga catgagatca cctatgaaga taaggtttta acacttactc ctgctgaatt
      541 tgaaatttta gaatacctta tccaacaaca cggatatagt gtttcaagag aacagcttgt
      601 aagtcgctgt aaaaatctaa aagataaaga ttctaaaagc cttgatgtta tcatcggtcg
      661 cttaagggta aaaataggag atagttcaaa atctccaaaa catatttttt ctgttagagg
      721 tataggatat aaactgatag gatgacaaaa aattattcta ttcataccaa actgattatt
      781 ttatttgttg ttactttttt cttggtttgt gtgcttttta tcgttctttt aaaaatagaa
      841 gggaatacct ataatgaaga agaaagttta aaacaagaaa atcttataaa aaatttactc
      901 atctcctatg aaaacacttc aggtgttgaa ataggagctt atcttggaaa cagcggtttt
      961 aacgctatac aaaatcccaa tcttgtaaaa gctataagaa ataatggaca atcacttttt
     1021 aaagcaggcg gagagctttg tactctttct tctttaaaat atcatagcaa tctttatttt
     1081 gatgttcaat gtaaagattt tgatggcttg tatgaagaaa atactagtga tagggtttat
     1141 aatcttttat tgataggatt tttctctttt tctttgttgg ttgtttttat gtatttttct
     1201 gtattaaaat ccttagaacc tttaaaaaaa ttaagaagac aagttgccga agttgcaaat
     1261 ggggaacaac ctgattttct agactatcaa gaagatgaag taggcaagat cgcctttgaa
     1321 tttcaaaaag ctttcaagaa aaaccaagaa ttaatccaat caagacaact tttcctaaga
     1381 acaatcatgc atgagttaaa aacccctata ggaaaaggga gaatcatttc tgaaatgatc
     1441 aaagaagaca gacaaaaaga aagacttatc gctatatttt tacgcatgga ttctttgatc
     1501 aatgaatttg ccaaaatcga aaatttattt tcaaaaaact acaacttaca ctttaaacct
     1561 agtcgtttta gcgctatact tgaagaagct aaagaacacc ttatgataga tgattttaat
     1621 aaagttgtaa aagtcgatat aagatatgac gctttaatca atgttgatat ggaaattttc
     1681 tctgtaattt taaaaaatct tatcgataat gccttaaaat actcaaacaa tggcacttgt
     1741 gagctttttt gttgtaaaga atgttttacc attaaaaatc caggcaaacc tttagcagaa
     1801 cctatagagc attatcttga agcttttaca agagaaaaac acaatcaagt caaaggtatg
     1861 ggactaggac tttatatagt ttcagaggta tgtaaactgc ataattttga tttgatttat
     1921 ttttatgatg atggaaagca ttgctttaaa attttctttg gagataaaga aaaataatgg
     1981 taaaaggcct ggaaaaattc aatgaacttg ttgaaagttt tgcaaattta cctaccatag
     2041 gaaaaaaaac cgccataagg cttgcttatc acctttgtat aaataatcaa atcgatggta
     2101 tgaaactcgc acacaatata gaaaatgcta tccgctttat aaaaccttgt gagcaatgcg
     2161 gtgctttaag cgaaaatgag ctttgcgaaa tttgtagcga tgaagaaaga aataaaaaca
     2221 ttttatgtat agttgaaagc ccaaaagata tactaacact cgaagagagt caaagttaca
     2281 atgggctata ttttgtttta gatgagttaa atgaagaaaa acttgaaaaa ctaaagcaaa
     2341 tcatacttaa gctaaatatc tctgagctca tttttgcatt gacacatagc attaattctg
     2401 atgcaaccat cttttttata gaggataaat ttaaaggctt aaacctaact tttagtaaaa
     2461 tcgctcaagg aattccaagt ggtgtaaatt tagaaaatgt ggatttaatc tctttaaata
     2521 aagctatgaa ttttagaaca aaaatttagt aatttttata agaaatatcg gctaattctt
     2581 gcaaagaaaa atccgcaatc ttttcataag caaaaccttc cttgcttaaa aaatcaagta
     2641 aagttttttc catgatttta gctccttgta taagctcatc tgaaagctta aaactcatcg
     2701 cttcaatacg ctttggcaca caagctaaga tgtgtgtttt aggcaaatct cctgcaagtt
     2761 ccatgtattg taaggtttga agcatttcta tttcatgggc acttccactc cagctaattt
     2821 tattaggcat agcatcataa ggaaagaaaa atacatctcc tatactcgca ccttgcgctt
     2881 ctatacagtc taaaacgata agtctatcgt atcgagcgat gatatagcta agctgcaaag
     2941 ccaaagttcc accatcaaca aaatctaaag taaattcaga atgagtgaat ttgtagtttt
     3001 tttcaagttg tttgcaaaga tgaacgccta agccttcatc cgcaaacatg atattaccta
     3061 ttccaaggac taagaatttc aatgctgttc ttcttttaca aatttatatc cgctaataat
     3121 agcatccata gcaccatctt taccttttac tgcgttaaaa atcgccatgt aaatatgtac
     3181 tggcacaaaa atcataatta cccacatcaa aattctatga taagttctta catcggccaa
     3241 accgcccatt gcagcttcaa gcggtcttaa aatatgatat aaaagcccac ctaagccctc
     3301 atggtaagta tgagtataaa gaataagccc tgtaagaatg atacctaata tcacaagata
     3361 aaagaaaaaa taagttacaa attgcaaagg attataaacc ccttttaaat gcggatgttt
     3421 tcctaagaaa atgtaaaatt ttacttgttc tatccataat ttgatattaa aaatatccca
     3481 tacacttctg cgttcttttg cgcttacctt atcgcagaaa aacaaatata ctttaaaaat
     3541 aatacaagcg attaaaacaa aacccaccgc ttgatgtact aagcggtatt ttgcttgcat
     3601 aaaatttacg ggttcaccgt tactaatagg gctttggaac acataggaaa gataataccc
     3661 tgtgccaata agaatcacta tagcaatagc tcttacccag tgcgttaaac gcaaacctat
     3721 gctaaattca tattcagctt ttctttgcaa tttttcttct ttgttttgca tgaaagcctc
     3781 cttataaatt gacattcact ttatattcac ttagattatt gcccttagta tccattacat
     3841 gcaccgcaca agcaatacaa ggatcataag agtgaatttt tctaatgatt tcaagtggtt
     3901 gttttacatc agcgatttta agtcctatca aacattgctc ataacttcca cctacgccat
     3961 ttgcgtcttt tggacttgca ttccaagtag aaggcaccac agcttgccaa ttttcaataa
     4021 caccattttt aattctacac caatggctta atgttccgcg tggcacatgc cccatatagc
     4081 gtcctttgta ttctttagaa ttatcgatca cataaggagc acaagtactc tggtctactt
     4141 ttaaattttc aactaaatta ttaaacgctt ttaaagcatt atttgcaacg atttttgctt
     4201 caatacaacg agcagctgtt cttccaagtg tgctaaatac agcatttaaa ggaagtcctg
     4261 tttcttttaa gaactcatct accacaggaa caacattttg attaccttta gcataattta
     4321 caacgacatt tgctaaaggt cctacttgca taggatttcc ttcatagcgt ggagctttaa
     4381 tccagctata tttaccctta gtatcaaaca ctttagaatg gacattattt ccatgatgat
     4441 ctacgctttc tccatctaca agtcctgtat aatttggatt tgttttgcca tcataaggat
     4501 gtaaaggttc attgtctgca taccaagaat gagttgcctc ttcagtaatc ttatcttctt
     4561 ctacttcata aaccttgctt aaatctccat ttttgataat accactttca aaaagccatt
     4621 catctcttcc gatttggaat tctttaaagg tataaagatt atttacccct atatcattta
     4681 aaacacttgc ttcatgtgca taagcttttc ctgccatcac aagatcagga taatacgcac
     4741 gattaacaaa gtcttgcact tcttggaatt taaccatata ttcacccatt cttgcaggat
     4801 cgagtaaatc cataacgcaa gttacaccac caacggttaa gctttgtgga tgtggatttt
     4861 tagctccaaa aatcgccata cattgagcaa tgattctttg aattcttaaa cattctagat
     4921 agtgagaaag aacgattaaa ttttgctcag gacttaaacg ataagttgga tgaccataat
     4981 acgcattagc aaaaggtcct aaatttcctt tatctacaaa agttttaagt ctttgttgca
     5041 cttcaagaag tttatccgca cctgttgcat aaggatttga agtgtattta aaagcttcat
     5101 cgcttgcttt tttaacatca gcacttaaag cacttaccac atcagcccaa tcaagcccat
     5161 gaagttgata aaaatgcaca atatgatcgt gtaaaaataa agccgcattc attaaagttc
     5221 ttgttaaaag cgcatttaaa ggcggagtaa tacctaaagc attttcaaca gcaactatac
     5281 ctgctttata atgtgaaaaa gtacaaactc cgcaaattct ttgcgtcata aaacccgcat
     5341 ctcttggatc acgccctttt actatggttt caataccacg ccacaaagta gagcccgcat
     5401 aagcttcttt taccacattg ttatcatcaa caacaacttc aactcttaaa tgcccttcaa
     5461 ttcttgtaat aggatctacg attatttttt gactcatttt tattccttat ctttttgcat
     5521 ggaagatata actgcgtgtg ctgctatagc aacgcctgtg agtgtaagca cacctatacc
     5581 gattttatct gaaacactat ccgcacccaa accaaaaacg gtatcaaatt tacgactagc
     5641 cataggctct tcaaaaggtc ccatagtatc ccaaaaatta ggctcagaac aacctataca
     5701 accatgccct gcttgaatag gccaagaagt gtgctggtta aatctctctc ttgagcagtt
     5761 attaaaagta taaggtcctt tacaacctac tttataaaga caaaaacctt gttttgctcc
     5821 ttcatcccca aaagcatgta caaattcacc cgcatcaaaa tgtccgcgtc tttcacaaag
     5881 atcatgaatt cttaaaccat aagcccattt tggtctatta tacacatcaa gtgctggtaa
     5941 ctcaccaaat aataaataat gaagtacatt acccactata tttttttcac ttggaggaca
     6001 gcctggaaca ttgatcacag ttttgcttgt tactttgctt aaaggctgcg cgttgctagg
     6061 atttggtctt gcagcttgaa ttcctccaaa gctagaacag gttcctatag caaaaatcgc
     6121 caaagcattt tcacttgcca tttttgaaag ctcatagcct gtttttccat gtgcacctat
     6181 ggttaaaaaa tgctctgtat cacccatagg gataccacct tcaaccatta aaatgtattt
     6241 atttttatgc ttttgaatgg cactttctaa attttcttca gcttgccaac ctgctgcagc
     6301 catcactgtt tcgtgatatt ctaaagaaat ataatcaaaa atcaaactat caatcgttgg
     6361 agtatcactt cttaacaaac tctcgctaca gcctgtacac tcagccatat gaagccacac
     6421 aacaggaagc ctatcagcaa gctcagcagc ttttgccacc ataggagtaa aactcgctgg
     6481 caaagccaaa aatgcagtca tagcacctgc ccatttcata aaatcccttc tagaaaaacc
     6541 tgacttttct aatgcttttg taatactatc attgtctttc aaagaaggaa gcttttcaag
     6601 agccgataaa cgcgactcta tttgatgata atcaatcatt atatttcctt tataacatga
     6661 aatttattct ctataaataa taaaataaag aaagttaaaa taaagttaaa aacttactct
     6721 cataagtaaa tattagcatc attcttaatt aaagcttaat cataagcctt ttttaagttt
     6781 gcgaatcaaa aatcttgcag gatgaatagc gtggatgtat tttttttcta aacacaaggg
     6841 ttcattattt atcaatgcac acaaatacct tgccgctaaa acacttgtac taaaacccct
     6901 tgacccatga gcaaaattaa aatacaaatt acaagacatt ttagctggtt tttgctcctt
     6961 attttttgtc cataataaag ctttatattc ttctttataa aacgcttcat cataagcatt
     7021 tccaactatc ataaagcgat cactcgaata agatctaaaa cctactttag aacctatgat
     7081 ttctaatttt gtatttttat ccataaaatc ggctatattt tctatatttt gtttatcatc
     7141 ttcttctttt gattctaaac ttgcattaag cctatcataa cttgcaccaa ttacttgcaa
     7201 atcatctttt acagggcaaa tataagcctt agaagataaa ggaaatgggg tatctaaaaa
     7261 aggttttaga tgtgtaactt gacctcttac tttgcttaat ttcatctcat cataaaaaac
     7321 aaagtctttt gcatctgcac ccatagcata aatcaaaacc gcataatcac ttttaacaac
     7381 atcattttta aattttaaac taaaacaccc attttcaaat ttataagctt gaaattcatg
     7441 attaaaatat atacaagctt tgcttttttc aaaaagattt ttaaccaatt tttttggaaa
     7501 aatcactcca ccctcttcta aaaaagcttg attttttgaa attttaaaca aaacattttc
     7561 tctttgcgtg tcaaatcttt cttgcattaa atcattatgt gcaaactcca ccacaccctt
     7621 aaattctaaa tctaaaattt gtctataaaa acgacttgcc tctataaaag aaagctctga
     7681 aaactcccct aaatttacct taggctttaa gattaaagag cttaaaattc cactttcatt
     7741 tccacttgca cccttgccta attctaaatg tttttcaaaa atatctattt caaaacctct
     7801 taaactaagc tcataagcta aaacagcact tgatatacct gcaccaataa tagctacttt
     7861 tttatttttt aaagatgaaa atgttcttga aaaatacgct tctttgtctt taaactcaag
     7921 ctcattttcc aaataagctt taatcatttc tctttttcta aaacctttgg ttttttctac
     7981 tctaaagcca tattttttta aatttttttg caaaaaactt gccgaagaaa aggtgcaaat
     8041 ttgtgtattt tttttagaaa gccttgccac ttcaaagatt aaattttcat caaacatttg
     8101 cgagttttta tttggagaaa atccatctaa ataccaaaca tcagctttaa aatccaattc
     8161 ttttaaaaca gctatatctt caaaaacaag atctaaaaaa caatcttcaa aataaaaacg
     8221 ataaattcct tctttagcct taggataaaa ttttaaaaat tgttctaaaa gctctttaaa
     8281 ctcttcataa aattctagtt tttgataaat ttctcttaat tgttcttttt cgatataaaa
     8341 agcttctacg ctaatataaa aaagtttttt aggacgctta gaaggggtag tttctaaaaa
     8401 gcgtttcaaa gtaagaaaaa aatttaaacc tatgccaaaa ccactctctg cgataataaa
     8461 attttcttga tttttccatt caaaagaatg agtgtaaaca aatttgcttt catttaagcc
     8521 atctttgaaa ttaaaataaa aatcatcaaa atccaaagaa aaaggagtat tatccttaaa
     8581 aattagctta gcttttttca tcggttgtta taaaaataac tctcaactcc atcagcaata
     8641 cccttaacca ataaatcttg aaaagcttta ttggcgattc ttttgccttc atttggatgt
     8701 gtaatatagc caatttcaat caaaattgca ggcatttgcg cacctactaa aacccaaaaa
     8761 ggtgcttctc ttacaccgcc atctacaatt ttatactttt tgcgtgtttg agtgagtata
     8821 tttttttgta catcaatggc tagtttattt gaagcaacga ttttttcacg atttaagaaa
     8881 tttaaaatac tttgttttga gaaataatta atctcttcaa aatccccttg attttctttt
     8941 tctgctgcct ttttacttct ttcacttctt gcaggactta aaaagaaagt ttccacgcct
     9001 tcgctacttt tggcttttgt ggcatttggt gctgcgttag catgtataga aataaacaaa
     9061 tccgctcttt tatcattggc atatttggtt ctatcacgaa gattgataaa tttatccgaa
     9121 cttctagtat aaagcacttt ataaccgcgt tttttaagtt catttccaag ttttaaagcc
     9181 gtacttaaaa ctatatcttt ttcttttaaa cttccttttt tatcacttaa agcaccgcta
     9241 tcttttccac catgccccgc atcgataacc acaagctttc ctgatttgta atttgtattt
     9301 aaagttttac tagaactttg agttgctttt ttgtttgcat tttgatttgt agtttgtata
     9361 taaaaaccta aagtgagatt attattatcc aactccttta aaagtttaaa ttctttagga
     9421 gcactcaaaa ccacacgaac ggtttttgga ttgtattgag taactgtaat cacattttgt
     9481 ccaaaagtaa agctttttct attaccttct aacacaccct taaaacttac aacatatcgg
     9541 aatttttgat ctttggtatc aaatactgct atttcttttt catctaaatc atcgcttaaa
     9601 tttaacacca cagcattaga aattttatcc acatctaaaa catataaagg ttcttgattt
     9661 tctttttcat tattggtttt tttatcttgt ttttttgttt ctaaaacttt ggttttaatt
     9721 tctgtttttt gatcttgctt tttctctgaa attttactaa cttgctcagt ctttttttgg
     9781 ctagtagttt cttttgaaaa aattattttt tcttctttaa aagatatatc aataggaatt
     9841 ttttctttag cataaaccac tatgcgtatg gttttgggat taaattgtga aatcactaaa
     9901 cgatagtcat caaatttaaa ctctttttta cccccttcta aaaccccatc aaaatcacta
     9961 ataaaacgat agtttccttt ttcgtctaaa gcaaaacttt ttaattgatc cttatccaaa
    10021 tctgcattta gttcaaactc tacaccttgg tttgttttac ttgactttaa aacataaatt
    10081 ttatcatcgc tttttgcttt agaaacgata ctgctctttg gtgcttgcga agttttagaa
    10141 tttgtttttt ctgtattttt tatttgttcg ttagatgatt ttttttcatt tttttgaact
    10201 gtttttatag gttcaaaagt tgatttttca gtgtcttgag aaatattttg aaccttaata
    10261 tctttaataa cagcctttct taaagcatta atacttgttt cacttatacc actttctttt
    10321 aactcattag catatgactt gtcatctaaa tttaaagtat ttgaactgat aatcaatctt
    10381 tttaaaattt caattttagt tttttcatct tcattaataa cactttgtat ataaaggctt
    10441 ttgagctgat ggtgaaattt tacttgcact tcacttttag aaccgataaa atttttatca
    10501 aaatttgcaa gttcattttc ataaactcca aaaagagttg tgaaaacaaa tactaaaaat
    10561 acaaaaattt tagccattat tcaccattaa ccaatttttc cataagttct ttaacactga
    10621 taagcttatc taaacgatat ccatttgcac ctgtaaagaa aagtcctgtt tcttttttgc
    10681 ctgaccacgc atcaaaaagc ctatctgcta tacaataccc tactttagtc gcctcttttc
    10741 cacgtccaca aggcgctaca caattgctta tacaattaat ctttggaccc attcttttat
    10801 ctaccaaatt taaaagattg gttctaactc cacgagcagg atagcccaca ggagatttaa
    10861 taagctctat atcttcttct ttagaagcta gcaaaacgct tttaaactct tcactcgcat
    10921 cacattcaaa agttcctatg aaacgcgttc ccatttgaac accactagcc cctaaagaaa
    10981 tagcattttc tatatctttt ttatcccaaa ttccacctgc agcaatcacg ggaaaagacc
    11041 cccaattttt agcctcttct accacaggag caattaattt ttctagctga taattcggat
    11101 ctaagcactg ctcataagta aaaccttgat gacctccact ttttggccct tctaaaacca
    11161 ctgcatcagg taagcgattg taacggcttt gccatctttt gcaaataatt tttaaagcct
    11221 ttgcagatga aatgataggc actaaagcca catcaggaaa atctgcagta aattcaggta
    11281 aatttgtagg aagtccagcg cctgaaacaa tcacattaaa accaacctca caagcatcgc
    11341 gtgctattct tgcataatca ttacttgcac ataagatatt acaccccaaa ggtgcatcgc
    11401 cacaaacttt tcttgcatta ttaatcaaag cttgcaaacc cttgcgtgag taaaaatttt
    11461 cacttccata aggcttagcg tttaattctt tacttgcata ctttctttct tcataatatc
    11521 ctgttcccac agaagaaata atcccaagtc caccatttaa agaaactgca gaagctaatc
    11581 tatcccagct tatgcctagt cccattcctc cttgaaaaat gggatatttt atagtatgtt
    11641 ttcctatttg taagggttgt aaattcattc ttttaccttt aattttgcaa attttctttt
    11701 acctatttgt aagatgtatt ctccttgttc taaatacatt tgctcgtcgc taactttttg
    11761 agaatttaca cttactgcat tagcactgat gcttcttctt gccgcagaag tagaactttc
    11821 caaaccacat tcaaccaaag ccttagcaag ccaaattttt ccttgtattt caaactcagc
    11881 catatcactt ggcaaagcat tttgagaatg aattctatca aattcagact tagcattatt
    11941 agcctcttct ttggagtgaa aacgctctgt aatctctaaa gctaaatttt ctttagcttt
    12001 tttaggatgt aaattgcctt gttctatatc tttttttatt tgcgcaattt cttctagact
    12061 tttttgactt aaaagttcat aatatctaaa catcaattca tcactaatac ttaaaatttt
    12121 agcatacata tcattagctt tttctgtaac accaatgtaa ttatttaaac tcttactcat
    12181 tttgtttaca ccgtctaaac cttcgagtaa aggcatcata atcacagctt gttcttttcc
    12241 tatgttataa actctttgaa gctgtcttcc catcaaaaga ttaaattttt gatccgttcc
    12301 acccatttca atatcgcttt ttaaagccac actatcatat ccttgaagta aaggatacaa
    12361 aaactcgcaa atcgaaatag gactttgctc tttaaatctc ttggtaaaat cgtcacgctc
    12421 aagcattcta gctacactaa aagttgaagt aagctctact atacccgcgg ctccaagttc
    12481 attaagccaa gtagaattaa acttaatctg tgttttttct ttatccaaaa ccttaaaaac
    12541 ctgcgtttta taagttttag cattgattaa aacttgctct ttatccagct ttttacgcgt
    12601 tgcacttttt ccacttggat cgccaatttg tcctgtaaaa tctccaatca aaaactgcac
    12661 aatagctcca tgtttttgca aaaaagccat ttttgttaaa accacgctat ggcctaaatg
    12721 taaatcaggc gctgtaggat caaaccctgc ctttataaag aaattttcac ccttttcata
    12781 ataattttta attaaatttt ctattctttc ttcatcaata agctctgcac aaccacgctt
    12841 aacttctgct aatatttttt ttatatccat aataaacctt tttaactttc tttataagca
    12901 tcatttaaag atgtaaaatc taaaatttta caacgagatt ttaacctatc cttgacacta
    12961 tctggattga tattatcagg aatttccatt gtaatctcaa aataatctac cgccgaattt
    13021 aaatcacttg ataaattaat tgttaataaa tttatctgca ttttagctaa aaatgccaaa
    13081 aattccgcta aaacaccttt tttattttcc aaagaaaaaa tcaatttata agatttaggg
    13141 atgttagaat cccattttat aaataccata tcttgattat tatctatcat tttatcagct
    13201 ctatcgcaaa gcttatgatg gacaatagcg ttaccacctt taacaaaagc taaaacagca
    13261 tcacctcttt ttggatggca gcaaaaatca aaatccacat tagcgatttt atggttacaa
    13321 tatagagtaa aatttcctat tttttgctct ttaatctcat atttatcaaa ccaatatgac
    13381 ttcttggcgt attttttaag accattaact atatctttca aataagcact atctgttgct
    13441 acttgtctaa tacgtctgac taaattttct ttttctatcc aagtttcaat tctgttttta
    13501 tcaactccaa aaataaaact taacatatta atagaacttg ctagattaat ctctctgatt
    13561 ttttgcttgc aaaattccct tatacttgct tttgcttttc ctgttttaac actatctatc
    13621 caagaacagc gataaaattt atcattgcta gtaaccactc gcacaatatc gccattttta
    13681 agctcggtta acaaaggtac tttaatacga tttacataag cactttttgc atgaagccct
    13741 actttggtat gcacttcata agcaaaatca agaaccgttg caccacgagg caaagtgaaa
    13801 atttctccct taggagaata aactgcgaca tcttcaacat aaagactatc tttagcatat
    13861 tcataaagct caatagcatt ataatcttct gcattttcaa gattgtttat actttgcatt
    13921 gaaatatctg taagccaatc aagacgaggc gcaaccacgc tgccatcttc tttatatttc
    13981 caatgcgctg ctataccaaa ttccgcaatt ttatgcatat caaaagttcg aatttgtgcc
    14041 tctataatac ttttagcatc aaaaagtgtg gtatgtatag tttgataacc attttgttta
    14101 ggcaaggcta tataatcctt aaaacgcgaa accaagggat taaaatgtgt atgtaaaatt
    14161 cccaaagcta agtaacaatc acttactttt tcaaccaaaa ttcttacccc aagcaaatca
    14221 agaacttctt caataccaat gccttttctt tgcattttaa gataaataga atagctatgt
    14281 ttaatgcgtt tttgaatttc aaaactacct tgtctaaagc cattactcaa aaataaaagt
    14341 tcgattttgg aaataaattc atttaaacct aattgcattt cttgattatt ggaattgata
    14401 taattgtcaa taagcttata ctcatctggc ataagatatt taaaactaag atcttccaaa
    14461 taatttttta tgcttgaaat accaagtcta tgggctattg gggcatatac aactaaagtt
    14521 tcttcgctga ttcttttttg cttatcttct cttagaatat caagagtaag catattatgc
    14581 agcctatcgc ataacttcac aatcaaaacc ccaacatctt caatacttgc taaaagcata
    14641 tttctgaaag tcaaggctga tttagttaaa ctttttttag attttgatga aatgagatta
    14701 tcttctctaa tttctataat tttagtaagt cctaaaacaa gttttaaaac ctcagaacca
    14761 aactgctctc taagttcttc ttcagtgcag tttgtatctt caatcacatc atgcaataaa
    14821 gcagctaaaa tattgctttt attttcactt aaaaatccaa ccagtgttgc tactaaaata
    14881 ggatgtaccg cataaggctc tccacttttt ctaaactgcc cttcatggca aaatatacag
    14941 taatctaccg ctttttcaag aatggcatca tggccacaaa tttcgaaaag caaagcctta
    15001 gcagcttcta aatctttaca attttttaca ttatcgatta attgttcaag caataattct
    15061 tcatcgattg gtttcaacta aaccctctaa agtgatttta ttttctgcaa tttcatataa
    15121 agctatatct gcaagtttat ttttattttt atcaaagtct accaaagggg ttgctccatt
    15181 tgccaattgt tccgctcttt ttgctaccac taaagaaagg cgatatctat cattacccat
    15241 tttttccaaa gcttttgccg ctacttcttc tattctttta tccataattt tctccttaat
    15301 tatttttaac ggttgaacaa aggctagtat caccttgtat gattttaagt aaattaccct
    15361 cttcaaacat attacaaacc acaataggaa gtttgttatc tttagctaaa gctatagctg
    15421 tatcatccat cactttaata ttatcttgca tagcctcatc ataactcaaa gtatttaaaa
    15481 atactgcatc atcaaattgt tttggatctt tatcataaac tccattaact tttgtagctt
    15541 ttattaccat atctgcatca atttccacag ctcttaaaat agctgttgta tccgtagtaa
    15601 aataagggtt tccagtacct gcagcaaaaa ccacaacacg acccttttct aagtgtcttt
    15661 gcgctcttct cataatataa gtttcacaaa atgcttccat ctgaatggcg ctttgaaccc
    15721 taacttcaag tccagagctt tccaaagctt cttgtatagc aatagcattg ataaccgtag
    15781 caagcatccc catatgatct ccacttgtcc ttttaatcaa tccgccctta gcagcactta
    15841 ctccgcgaat aatattacca ccgcctataa ctatgcctac ttctatttga ttttttataa
    15901 gttctttaat ctctgaagct atgaatttta aaatagaatt ttctatacca aagccatttt
    15961 cacctgctaa agcctctcct gaaaatttta ctaaaactct ttttctctct tgcattattt
    16021 ctccttattt aacttgaaat tatattttaa attccattaa atttagctaa tttaagctaa
    16081 tgagttccaa aggattgata tgaaaatttt tttgagttac ttcaaaagta agatcatttt
    16141 ttattctacc cactacggca ccttttttaa tattcttacc aactttaata ttaggagcaa
    16201 tcttatctaa atgtgcgtat attgtatgta tgccattatc atgttcaaca ataacaactc
    16261 gagctagcat actagtatct ttagcaaaaa ctatttttcc atctagcaca tttttaacaa
    16321 ctgcatcgct tttattgctt cttaaaacta cattctcgtt aaaaatttta agattgtaaa
    16381 caggatcaac ataatttcca aatttttgct tcacagtaaa agaatccaat ggagctatgg
    16441 ttttttttcc tgtgtaacgc ttgactgaac ttccttgata gcttgaacct aattgtctta
    16501 ttttttgatt attttttact attttagtat catttttgtt tgaatttgca tcttctttat
    16561 cattaataat ttttaattga tttaatgttt ttctaagctc ttcttgctga gcttgtaaat
    16621 catcgagttt ttttgcatat atagctcgat ctgttttttg tttattaatt tcgctaattt
    16681 gtttttgttt taaactttga agcttggcta attgagcgtt gtaatcctta agactttcat
    16741 tgattttctt aatctgagct tgtttatcat caataagcct gcttactccc tcataatctt
    16801 tagaaatttt aaaaatttct tcatttaaaa ctttgtttaa acttcctaaa atttcaaaag
    16861 ccataaaact ttcttcactt tcaatatagc cttgagggat aggtaaatca taagcaaaat
    16921 ctttagccat taaagatata agcttacctt ccatatttga tttactttta agcaaatctt
    16981 cattttggct tgtaagggtg tttaactctt gattttgagc cttagcactt gcttcaagct
    17041 tagaagtttg tgaatttaag ctttcaattt gcaaacttag atctttcaaa cttttttcac
    17101 catttaaaat atcgctagcc aaatcttcaa gttttttatt taactgttct tgtatgcgtt
    17161 tattttcttc taaacttttt gttttttcat ttatagcgtt tgctaaactt atatcaacaa
    17221 acaaaaaaaa acaaaaaaag ataagaatat tttttctcat cttttaacct taaacataac
    17281 cgtatttaca cacaacaagc aaataaacaa agtagctaaa aaaattaaag tcaaatgtaa
    17341 aataaaatta ataggtggaa aaataatatc tacagccttt aaactttctt ggataataga
    17401 aagatcaaaa atttgggtaa aaaaggcaag taaaataaca aaagcaataa aacaatcaac
    17461 cacaaccacc ttataaagca taaaagatct aaaccaaaac ggagctccaa ataaacacat
    17521 aatttcaata cgatcggtat gttcataaag ccaaattctc atctgtttta aaaacaaaac
    17581 aaaggcaagt aaaataatga taaacaaaaa taaccaaaaa acaaatttca tcaaaataag
    17641 caaagagtat atcttatcat gggttttgga aaaagtttca accttactaa cacctacaat
    17701 atttaaaagt tgatttttaa tcgaatttag ttcattttga tcgggtaaag aatttaattt
    17761 taaagtataa aattttggca gagaatcttt taaaactttc aaattctttt cagaaacatc
    17821 atttttcaaa cgatcaatta aatccttagg atctaaagat tcaagtccag caaaaaatgg
    17881 tacttttgtt tttactacat tctgatcaag ttcagttttg ctgacaacta taatattata
    17941 atctttatta acaagttctt cataatgctt caaagttgca tttgtaatca aaataaattc
    18001 aaaagcaaac atcataaaaa gtaaaggtaa aattaaagat aaatgtgttt taaaaaattt
    18061 cattcatttt tccattttct atattaaaac gacgataatc cactcttaaa ttactaggaa
    18121 ttctatgtgt taccactata acacaagttc ctaaaagctc tctagcagac tttaaaagag
    18181 tccatataat atcagaagaa tactcgtcca aatttcccgt tggctcatcg caaagcaaaa
    18241 gctttggatt atgagctaaa gccctagcca tagcgacgcg ttgttgctca ccaccgctaa
    18301 gttgattagg caatttatct gctttaaaag ttaaatttac atgctttaaa agcttagtag
    18361 cttgatcatg gcatactttt ttgctataac ctttaatcat taaaggcaac ataacatttt
    18421 tttcaacact atattcttgt acaagtttat aatcttgaaa aataatccct attctttgac
    18481 gtaattttaa aagttctaaa tttccaattt tattcatcaa agatccacat acttcaagtt
    18541 taccagaaat aggttctaaa tctccataaa aagactttaa aagcgtactc ttaccactcc
    18601 cacttttacc cgtaataaaa acaaaatcat catccttaaa agcaaaactc gcttctttaa
    18661 taactagttc atcataacct aaagtaagtt tatttgcttg gattaaatta ggcatccttt
    18721 ttccttaatt tcccttttta aatttttaaa ttatgcttta tttttgctta attttcaaga
    18781 aaaattatat tttaaactga acttttaaaa tttcttttaa ttcatttatc gctttaatat
    18841 tttcttgaat tttaaatggc tctttaaaag caaaatcaat cgttttatca agatgcaaat
    18901 aacaatgttc aggcttatta aaagctccaa aagcaacctt taaaagcaaa ttctcatctt
    18961 gtttatagat gctttcaaaa tgcaagaaaa aatcatcttt ttttatagta atatttttaa
    19021 agttctgctc tatttttttc aaatcctctt tagaaaattc aaccgatgag agattaaatt
    19081 catttaactc atagttttta cactcttggt taaaattcca cacccaaaga tcatatatat
    19141 ttttttcttg ctttttccat ctatcttcat atttgcttga aatttctaaa ttttcatttt
    19201 ttctaaggct aaattttgga gcaggaaaag tcaaaaattg ctctaaagta aaattaaaat
    19261 actcaaaact atctgttcta agctcaaaac gaccattttg aactaaaacc ctagcacatt
    19321 ctttgcaaaa atctttccca ataactcgcc tatgaggctt tttgtcccaa ggaacaggga
    19381 aatgtaaaaa aatcttttca actgattttg attttaatac actcaataac aatctcgcat
    19441 cactttggat tagcaaaata ttatttacat tttgtgcttt agcaagttta gccacttgag
    19501 ttaaagctgg gttgtaaatt tccaccccta aaattaaaac atttggattt tcttttgctt
    19561 gataaagcaa atgtcttcct gatccaaagc ctatttctat ataaatttta ccttgaagtc
    19621 tagataaaag ctcatcaaaa ttatcaacga taaatggtgt tttttcaatt aaagcattat
    19681 ttttaagtcc aaaagcttca ttgataatat cctcacaaaa accttcttta aagattttta
    19741 aagccttttg caaataacct attttagaag gttttgtatg tttatcgcct ttaatcacaa
    19801 aaccattttg tgctttttta atctgcagaa aaaaactctc ttcttgaacc tttgtataaa
    19861 taagactaac attatcattc ttagcaagcc aaagaaattc aacatcatcc ttactataag
    19921 gcagatttat ttctttgatc tttttacttt taaaatttgg cactactgag ccgccttaac
    19981 tttgcttgaa ggttctgaac gaagctcggc tgaatcaata gcaataactt cataactata
    20041 ttccacccct ggcaaagctt ttacatcttt taatcgcttt tctttaatgc ctttaaaaac
    20101 tgcattttgc tccccgccat agcgtcttac ttcatactca acagctctag tatcattatc
    20161 actccattct aaatttatcc cttcgcttgt actttgagcc aaaataatac taggagccaa
    20221 agggttgcct aaagttttac cttctacacc atcttttggc ataggacttt caagaccatc
    20281 tttatccacc attgttactt tataatactt gcttttacct gctccttcta ctatatcctc
    20341 ataagaattt ttatcagtct ttgccaaaac actaaaagga aggaagcttg agctcgtaga
    20401 ataaacttta taataagaaa aatcttcata cgtaggagca tcccaagtta aaatgatttt
    20461 actagaacca tctgtgctag cacttaaatg ctcaacttga ggaggtaaag ccttgcttgt
    20521 agaacttaca acttgacttg acccactctt tatcccatta aaactcacag caataattct
    20581 ataacttgaa ttttcattag gctttaaatc actatcgatg tattcagcgt ttaaacgatt
    20641 ttttacttct gcaatttttt taaattcttt atcatcacct ttggttcttt caataatata
    20701 agaatcaacc ctaaaatcag gatgcggacg ccaaataagt ttaatacgat taggcaaatt
    20761 agtcacagct tgaacaaaag gaacagcttc aagtcttgga gctgtgctca cttctataac
    20821 cttgccatct tctgaaattt gtccttgctc attaaagctt ttcatcatat aacgatactt
    20881 agtaccaggc tctaatttag tatctacata atgagtttga aacttatctt taatagtgcc
    20941 tacaagttta aaatcaggat tttcatcact agaacgatac aaataaaatc ctttaatatt
    21001 ttcattatat aaaggctccc attcaaaagc aatattactc atatcactaa gactttttaa
    21061 actttcaacc tttggcaagc tttcatttac agcaggctct ttacttgaag ctagcgaatt
    21121 catttgcgaa acactacaag cgctaagcaa aagagttaaa aaactcaagt aaaaactcaa
    21181 gcgaaatctt ttcatcattc tctcctaaat taatttgttc aaacataata tttttaaaat
    21241 cttccatcaa aggtgcttta acaaaaattt gttctttggt ttttggatgg ataaaataca
    21301 aaaaataagc atgtaacatt atcctacaat catacttacc cttataacca tacaaactat
    21361 cacctaaaat atagcgattt aaactagcca aatgcgctct aatttgatga gttcttcctg
    21421 taaaaagctt agcagccatc aaagttaaat tttcagtttt tactacattt ataaaagctg
    21481 attttgcgtt tttactgaat ttattttcct tatctatggc tattttttta atagcattag
    21541 aaggcgaacg cattaaaaat ttttctacta taattttatc ttcttttagt ggcaaatcaa
    21601 ttaacgcaag gtaaattctt cccatgcttt tatctgcaag ctgttcactt aatttttgat
    21661 gggtgaaatt atttttcgct attagtatag ctccgcttgt atctttatct aatctatgga
    21721 caagaccagc tcttatctct cctcctaaat ttgataaagt atattttttt tctattaacc
    21781 aatccaccaa agtggcattt ttaacgctac ttgctccatg aacgactaaa tttgaaggtt
    21841 tatttaaaac aagcaagtct tcatcttcgt ataacacatc aatatcaaaa tccacttcaa
    21901 actgaggttt tatctcattg caaagcttta aacttgcaat agaaataata tcaccatttt
    21961 taagcttaaa tgaattttta tcttgaattt tatcattaac ctgtacacaa tctttttcta
    22021 taagtaaagc aacttgattg cgactttggt ttaatttttt agccaaaaat acatcaagcc
    22081 ttgaattttc atctactaaa aaagtttgca ttttttcctt agaggttttg ataaatttaa
    22141 aattttagtt tataattata gctttatatt accaactgaa ggcaaatttt gtttagatta
    22201 gatagaagaa ttttaactca ttttgactat atgcaaccca ttttattttt acccataatt
    22261 cttatttcat ttttcttaat ctttgaagct aatccttttt tagcagaaaa acagtttgtt
    22321 tatgcctgtg tgggattgtt tgcttttatg gtttttttct tctttcccat aaggaaattt
    22381 atttggatta ttcctgttgc ttattggatt aatatttttt tattgctaag cgtagatatt
    22441 tttggggttg aaaaattagg tgctaaaaga tggcttgaaa ttccttttac tcactttact
    22501 atacaacctt ctgaaatttt taaacctagt tttattttaa tgcttgccta tcttatttat
    22561 caaaatcctc ctccaaaaaa tggatacaaa cttaaacaat tcatcaaact tagcttttac
    22621 atcatcttgc cttttttgct aattgcaaaa gaacctgatt taggaagtgc tatggtttta
    22681 ctacttgttg gttttggagt gctttttatc atgggagttc attataaaat ttggttaagt
    22741 attgttatag ctataagtgt tagctctcct attatttata cacatctttt aaaaccctac
    22801 caaaagcaaa gaattcatga ttttatttca gaaaaaccaa gttatcaagt agcccaatca
    22861 atgatagcta ttggaaatgg tggtttaacc ggaaaatctc aagatgaagc tacgcaaact
    22921 cattttaaat ttttacctat ttcaactagt gattttattt tcgcttacat gatagaaaga
    22981 tttggattta ttgggggatt gacattaatt atattttata ttttacttat ttttcatcta
    23041 cttagtttaa attataaact taaagatgat tattttgcta gagttgctat taattgtgtt
    23101 gcattattta tttttattta tgcggcagta aatatttcaa tgactatagg ttttgcacca
    23161 gtagttggga tccctttgcc tttttttagt tatggtggaa gttcttttac tatttttatg
    23221 attttttttg gaattttaca gcatttaatc acttttagat atttttggac ggatataaag
    23281 gctaaataaa atatttttaa gcattaataa gatataattt tatcttttaa ttcaacttag
    23341 gcggatttat agctcagttg gttagagcaa ccggctcata accggttggt cgcaggttcg
    23401 agtcctgcta aatccaccat tctacatata agctatagac tctttcttta aaaaataact
    23461 tttagttctt taaatatttc aatcttatat aaaaaaagta tgtgatgtga ttttttgaaa
    23521 gataaagtgg tggttagagg cagaatcgaa ctgccgacac gcagattttc agtctgctgc
    23581 tctaccgact gagctatcca accacaatgt ttgataaagt aaaaatgtaa ttgtatcttt
    23641 ttttctttaa tttaagttta aatacaaaaa taaaatttta tttcccttaa agttttaata
    23701 agatagaata cccgctttag atcattatca aatggaaatt ttttgaaaca atttggacta
    23761 gatagacgaa cttttaaaat tttactagct ggttatatta ttattgcatt gtttggggct
    23821 ttattgctac attcaagctg ggcacataca actcctattg attttttaga tgcctttttt
    23881 acaagcacat ctgctgttag tatgacagga ttagtaatta agaacactgc ggttgatttt
    23941 accttagcag gacaaattat tatcttagct ttggtgcaaa ttggaggctt gggatatatg
    24001 ggtataggtt tatttgttta tatactcata cgcaaaaaag ttggttttag tgcaagaaat
    24061 ttactaaaag agtctttatt ttatccatca atggatggtt tatttaaatt ttttaaaaag
    24121 gttttgctgt tcatttttac tatagaattg ataggtgcta tacttctcac catgcgtttt
    24181 gcccttgaaa tgaattttaa gaaagcttta tggtttggaa tttttcattc tattagcgct
    24241 tttaataatt ctggatttac tatatttgaa catggattta tagcttataa acatgatata
    24301 gcaattaatc ttattatcac ttctttgatt attattggag ggcttggata ttttgttttg
    24361 gttgaattat acttttttca aagaaaaaaa ttgcaaaatt taagcctaca tacaaaaatg
    24421 gttgttgttg caagtatttt tcttattttc tcttcaacgc ttattatttt tgcttttgaa
    24481 tactcaaatc ctcaaactat aggacatttt tcattttttg ataaaatttt aagctcatat
    24541 tttatcgcta ttaattaccg cacagcagga tttaatacct tagatatggg acatttgcat
    24601 gatgcaagct tattttttgg atcattgttt atggttattg gtggtgcacc aggtggaaca
    24661 gctgggggta tgaaagtaac aactgtaatg gttttattgc tctatgctta ttggagtatc
    24721 cgcgatggaa gagttagaat ttttggacat gaaattccaa gagaaactat atctaaagct
    24781 tttattatag ctgtaggttc agctgtttat atagtaatag ctgttatttt gctttccttg
    24841 ctagagtcaa aatttgattt tatagccttg ctttttgaaa cttcttcggc ttttgcaacc
    24901 gtaggaattt cagtaggaaa tggtggaact ttatctttat gcgctttgtt tagtgatcct
    24961 agcaaggtga ttatcatcat tatgatgcta agtggtagga taggtgtttt tgctttttta
    25021 ctctcggtat tcaaacaaga caaagctatt catttaaaat tccctgaagg aaaggttaat
    25081 ttataaaggt aaaatcgtga aaaatcttaa ttatggaatc ataggacttg gaaaatttgg
    25141 atcagttgta gcagatgaac tcattgctgg aggtcatact gttatcgttg cggataaaga
    25201 tgaggaagct ttaaaaagta tacaaaatcc tccaagctat gcttatattt tagattctac
    25261 aaatatttca gccctaaaag aagcaggctt tcatgatgtt gaagttgtta ttgttagcat
    25321 aggagaaaat gttgaaaaat caatccttac tcttatggcg cttaaagata taggtgttaa
    25381 aaatatcatt gctaaagcaa cctctaatat ccatggtcaa attctttcta agttaggtgc
    25441 aacaaaggtt atttatcctg aaaaagaaag tgctaaaaga ctagtaaaag aatttttaac
    25501 taaagatgct gattatgaag tttttgatct ttcagcaaat actatacgag ctattaagat
    25561 caatatagat gaaaaattag caggaaattc tttaaaacat gtagcacaaa atatgaaagt
    25621 gatttcttat aaaaaattaa atagtgactg ggaaatacta cctgatttag aaaccacgac
    25681 agtttatagt ggagatgttg taatactcct tggaacagtt aaagaactta gagaatttga
    25741 acactaagca agatttaaag ccttacaagc ctttacaaaa cgctttaagg ctgttttttc
    25801 tttggtagaa attttatgat atataacttc atctaaataa tatctaacat cttttatatc
    25861 taaatccctt gttttggcat aattttgcag tatataataa ggaattttaa tctttgtttt
    25921 tggaaatttt ttcaaaattt gtttatataa agcttttttt tgcacacaag aaaatctagc
    25981 aaaaacaaaa ggcaatcctg ttttttcgtg ccattttgca cataaatcga tatatttaga
    26041 aggatctttt agataaagct ttaaagcctt atcacctata attacttttc catcttgttt
    26101 taatacttta gccagagcgt ttgaagttgc tgaacttgga tctttggcat ttgatgtatt
    26161 tttttctact aatacactta aaactctttt attggcacaa atacccaaat ctaaattttt
    26221 atattttttt ctagcacttt ctatgcttga aatgatagct gcatcaattc ttctataaaa
    26281 taaatcttta tttagcttac ttggaactcc ttttttatac tccatacttg ctttataacc
    26341 attaggtagg ggatatttct taagatatat atgtaaaggt aaaagattaa tataatcaat
    26401 ttttccaaaa atcatctctt ttatagagtg ttaaacactc tatctcctgc atctccaagc
    26461 cctgggataa tataaccttt ttcatttaaa ccttcatcaa tacaagccac aaaaacttct
    26521 acatcatcat gcatttggct aaattttttc aaaccttgtg gagcagcaag tatggatata
    26581 aattttattt ttttaactcc ttggcttttt aaaaaattac aagcatctat agcagtccca
    26641 cctgtagcaa acataggatc tataacaata gcagtgcgtt tttttgcatc tttgggaagt
    26701 ttttgaaaat aaaaatccgc ctttaaagtt tcttcatttc tcacaaaccc caaaaaccca
    26761 acacttgcat caggaatcat cttaaaaaca ctttcaagca ttcctaatgc agctcttaaa
    26821 ataggacaaa tcataatttt ttcatcaagt ttttttactg tagttttttg tataggtgtt
    26881 gaaatttcaa tttcttttaa agaaaaatct ttactcgctt caaaaagcaa aaaagatgaa
    26941 atttcatcga ttaacatacg aaattgaaag ggctttgtct ctttagccct taaaattcct
    27001 aatttatgtt cgatcaatgg atgattgata caatgaatat ttttcatttt aagctttcaa
    27061 aataagcttt ctcatcaaaa tttttcacct tagctacacc atcttttacc gcagctgctg
    27121 ctacagctgt acttactgca gcttttactc tttcatcaaa aggttttggt ataacataat
    27181 ctcttccaaa ttctaaagtg cttaaattat aagctttttt aaccgcatcg cttacaggaa
    27241 gttttgcaag atctgctaat gctttagcag ccgctacttt catattttca gtgattttac
    27301 ttgcacgcac atctaaagcc ccacggaaaa taaaaggaaa acctaaaaca ttattgattt
    27361 gatttggata atcacttctt cctgttccta caatcgcatc ttttctaagt ctagccacat
    27421 cttcaggcat cacttcaggg ataggatttg ccaaagcaaa aatcacagga tcttttgcca
    27481 tgcttaaaac catttcatca tcaagaattt ttggtgcact aagtcctagg aaaacatcag
    27541 ctccttttaa aacttctttt aaagtctttt ccttagaatc aacagcaaat tcaagttttt
    27601 gaggagttaa atcatttcta tctttagaaa tcactccttt actatctact aaaataatat
    27661 tttcaacccc taaatttcta tacatcttag cacttgctat acctgcggca cctgcgccac
    27721 ttacaaccac cttaatgtct ttaaattttt taccacttat ctccatagca ttcataagcc
    27781 ctgcagttga aataatagct gttccgtgct gatcatcatg cattacagga attcctaaat
    27841 cttgcaaagc cgcttcaatt tcaaaacatt ttggagcagc tatatcttct aaatttatcc
    27901 cgcccacagt cggagccaaa gccttgcaaa aatttacaat ctcttctata ctatgaacat
    27961 taatttctat atcataagca tttacatttg caaatttttt aaacaaacaa gccttacctt
    28021 ccataacagg ttttgaagcc tgtgctccta tgtttccaag tcctaaaaca gcagaaccat
    28081 cgctaactat agctaccaaa ttagctttat ttgtataagt ataagcaagc tcattatctt
    28141 tagcgatttc aaggcaaggt tctgcaactc ctgggctata cgccaaagat agatcataac
    28201 ttgtagccat tggcttactt ggcacaatat caattttccc acctaaatgg tattttaaag
    28261 cttcttcttt taaattcatt ttattttcct ctaactttta aaaaattgtc tattcttttt
    28321 ttacactcat caacccctaa aaattctaat acttcaaaaa tactaggact taccgcactc
    28381 cctgttaaag ctatgcgtat aggctgagcc aaatctttta actttgcttc ttttttttct
    28441 aaaaaatcat ttgtaaaatc ttcaaaatct ttacctgttt tttgatcttt aagtgtattg
    28501 gcaaatgctt ggagcaattc taaattattt ttgttaacaa atttttgcac tgcattttca
    28561 tcataatttt gcggtgcatt aactatgctt tttgcaccat tgataatatc atgcaaggtt
    28621 tttgcacgct ctcttaataa atcaagtaaa aatcctgcct tttcataaac agataaatca
    28681 aagccaagat ctttaagctg acggttaatc tcttcaaaag gcaaagtttt aatataatga
    28741 gcattcaacc attcaagctt tttagcatta taacaagatg cgcttttatt gatatgataa
    28801 ggatcaaaaa gttttttcaa atcttctagt gaaaaaacct cgtcatcgcc atgactccaa
    28861 cctaaacgca caagaaaatt aagcaaagct tgaggtaaaa ttcccatttc tttgtattcc
    28921 ataacatcag ttgccccatg tctttttgaa agctttttac catcttctcc atgtatcata
    28981 gccacatgaa aaaatttagg aattttaaaa cccaatgctt cataaagcac aatttgttta
    29041 ggagtatttg aaagatgatc atccccacga atcacatcgc ttacccccat taaagcatcg
    29101 tcaataacaa cagtaaaatt ataagttggg gttccatcac ttcttgcaat gataaaatca
    29161 tccattatat cttctgcttt aaatctcacc tcgcctttaa ccccatcttc aaaaacaatc
    29221 tcgccacttt gaggcgcttt aatacgcaca acaggttcta taccctgagg tggcgtgcct
    29281 gtaaattctc tatatcttcc atcatatctt gggcgctctt tggcggcttc ttgcttggca
    29341 cgcaattctt ctaattcttc tttactcata taacaataat acgctttacc ttcatctaaa
    29401 agctttttaa catattcttt ataaagatca aaacgctctg attggtaagt tacttctcca
    29461 tcatgttcta aaccacacca tttaaaagct tcgataattg ctttagtagc ttctttggaa
    29521 tttcttttta aatccgtatc ttcaatgcga agtaaaaaat ttccaccatt ttttctagcg
    29581 tataaataat tataaagagc tgttctaagt ccacctatgt gcaaataccc tgttgggctt
    29641 ggagcaaaac gcgttgtaag tttttcgtgc attttttgcc ttttcttaaa tttttattga
    29701 tataatgcga tatttatact taaataaagg tttgaaatga aaaaaatttt attaagtttt
    29761 gcattttttg caagtttggc tagtgcaaat accattaatg ctatagctgt agttgtagac
    29821 aaagagccta tcacaactta tgatatagat caaactatga aagcacttaa aattgataga
    29881 aataaagctt taggcgtact catcaatgaa aaaatggaaa tttcacaaat gaaacaactg
    29941 ggtattgtag tcaatgatct agagcttgat gatgctataa ataaaatgct tgctcaaaac
    30001 aaaaccactt taaatgcttt caaagcaaat ttaaaatcca aaaatcaaag ctatgaacaa
    30061 tttcgtacaa attttaaaaa agatttagaa aaaagaaagc tttatgaaaa aatcgcaagt
    30121 atggcaaaaa ctgactttag tgatgatgga gcaaaaaaat ttttcgaaca aaataaagat
    30181 aaattcactt tttatacaca aattaatgca aatatttatc tatcaaacaa tcctcaaact
    30241 ttagaaaata tcaaaaatac aaaaaaaaca atccttaaac cacaaaatgc atctttaaac
    30301 acaagcaatg ccgatccaag acttttagga cttttatcgc aaattcctgt tggaggcttt
    30361 tcccctgttt taaatggaaa aaatggctat gaactctatg aagttaaaag caaagatggg
    30421 acacaaactc ctgaatacga acaagttaaa aatgaagttt taaacgctta cgtaagtgaa
    30481 caaagacaaa atttcataca ggattatttt gataaactcc gctctaaaat caatatagaa
    30541 tatttaagat aaaaattaca attaaaattt cccttataat agggaaattt taatgtcttg
    30601 caagataatt tgtatcgtaa ttattattaa taaaatcagg attttccatc atggaaagat
    30661 gaaaatcttt agtcgttttt atcccactta taagcaactc atctaaagct actttcatct
    30721 ttgcaatagc tttattacga tcttctgccc aaactacaag tttgcctatc atagaatcat
    30781 aataagcagg cacgctatag tcttgataac aatgactttc cattcttaca ttgcgtcctg
    30841 cgggtggaat gtatttagta atcttacctg gacttggcaa gaaggtttta gaatcttcag
    30901 ctgtgattct acattctata gaatgcccat taagcttaat actttcttga gatggtaagg
    30961 cataaccttc tgctacttta atcatttgtt ctatgatatc aatcccactt accatttcac
    31021 ttacacagtg ttcaacttgc aaacgcgtat tcatttctat aaaataaaag tctaaatttt
    31081 tatctactaa aaactcaaaa gttcccgcac cttcatatcc tatagcttta gctgccttaa
    31141 tagcagtttc atgaagccta gtgcgtgttt tttcatcaag caaaatcgca ggggattctt
    31201 ctataagttt ttgatggcgt ctttgcatag aacaatctct ttcgcccaca tgaatcacat
    31261 tgccaaaact atctcctata acctgcactt ctatatggcg tggattttgt atgtattttt
    31321 ccatatacat agttccatcg ccaaatgctg tcatagcctc gctttcagcc gaccaatacg
    31381 ctttttcaag atctttttca ttttcaacca cacgcatacc acgaccacca ccacctgcag
    31441 ctgcttttaa aatcacagga taacctattt ctttggcaag ttttttagct gcttcagctc
    31501 ctgccaaagc cccatcgctt cctgggatca caggtacgcc tgctctttgc atgacttgtt
    31561 ttgcttttga tttatcactc attaaattca tagcttccac agaaggacct ataaatttga
    31621 tgttatgttt agcacaaatt tcaacaaaat tttgattttc acttaaaaat ccgtatcctg
    31681 gaaaaatcgc atcagcttct gctatttcag ccgctgcgat gatagctggg atatttaaat
    31741 aactttcaga acttcttgcc ttacctatac aaatgcttgc atcagcgtat tttaaataca
    31801 aagcatcttt atctgcttca gaatacacac aaattgcttt tttacccatt tctttaatcg
    31861 ttcttaaagc acgcagtgct atttctccac gattagcaat taatatgctt ttaatttcca
    31921 ttttataatt tctccaccgc aaataaaggc attccaaatt ctacaggctg accatcagca
    31981 actaaaattt cagcgatcct acaatcaaat tccgcttcaa tttcattcat gattttcatc
    32041 gcttcgataa tagctatagt atcgcctttt ttaaccgtac tacctacttt tacaaaaggt
    32101 gctgcacctg gacttggagc ttgatagaaa gttcctacca tagggctgtt tatacttggt
    32161 ttgtttgatt ttacactttg actaggttga gcttcgttta caacgcttac attgataggt
    32221 tgtggagctg gaactggagg acaaacagga gctggaacat cgcagcacat atctctttca
    32281 agttctattt caaaaccatc ttgttctttg atcttaattt tactaatatt tgcttcagca
    32341 aaaaggttga ctaactcttt aatttcttct tttgtcataa aattctccta caaaatttaa
    32401 gaacttaacc ttgtattata taaaaaaact tgaaatttaa ctttaaaaaa gaaaaaaatc
    32461 ataaaaaata tagatttttt aggttataat ccttacaaaa attactaata ttaaaaaggt
    32521 taaaaatggg cttaaaagcg gataattgga taagaaaaat ggcattagaa cacaagatga
    32581 tcgaaccatt ttgcgaagca aatataggaa aaggtgtggt aagctatgga ctttcaagct
    32641 atggttatga tatacgtgta gggcgtgagt ttaaaatttt taccaatgtt aattcaactg
    32701 tagtggatcc aaaaaatttc gtagaagaaa atgtagtaga ttttgaaggc gatgtatgta
    32761 tagttcctgc aaattctttt gccctagcta gaactataga gtattttaaa atgcctgata
    32821 atgtcttagc tatttgtctt ggcaaaagca cttatgcaag atgtggcatc atcgtcaatg
    32881 ttaccccttt tgaaccaggt tttgaaggac atatcactat agaaatttca aatactacgc
    32941 ctttacctgc aaaaatttat gccaatgaag gtatagcgca agtgttgttt ttgcaaggcg
    33001 atgaaaaatg tgacaccact tataaagata aaaaaggcaa gtatcaagcc caaactggca
    33061 taaccttgcc aagaatttta aaataggaac acttattgct ttaattttaa aaaaacttaa
    33121 gcaaaggaag gcaaaatgtt taatggaaaa aatatcttaa tcacgggcgg aacaggctcg
    33181 tttggaaaaa cttatactaa ggttttgcta gaaaactata aacctaataa gattatcatt
    33241 tattctcgtg atgagctcaa acaatttgaa atggcaagcg tttttaatgc tccttgtatg
    33301 cgttatttca taggagatgt aagagataaa gagcgtttaa gtgctgctat gcgtgatgtg
    33361 gattttgtta tacatgctgc tgcaatgaag catgtgccta ttgctgaata taaccctatg
    33421 gaatgtataa aaacaaacat acacggtgcg caaaatgtca tcgacgcttg ttttgaaaat
    33481 ggggttaaaa aatgtatcgc tcttagtacg gataaggctt gcaatcctat aaatttatac
    33541 ggtgcaacca aacttgcaag cgataagctt tttgtcgctg caaacaacat agcaggtaac
    33601 aagcaaacac gctttggtgt tacaagatat ggcaatgttg taggttcaag aggttcagtg
    33661 gtgcctttct ttaaaaaact catcagcgaa ggagctaaag aacttcctat caccgatacg
    33721 agaatgactc gtttttggat cagccttgaa gatggagtaa aatttgtact gagtaatttt
    33781 gaaagaatgc atggaggaga aatctttatc cctaaaattc cttcgatgaa aatcaccgat
    33841 ctagcccatg ctctagctcc taatttaagc cataaaatca taggcataag agcaggagaa
    33901 aaactacatg aaatcatgat ttcaagcgat gatagccatt taacctatga atttgaaaac
    33961 tactatgcta taagcccgag tattaaattt gtagataaag ataatgactt tagtatcaat
    34021 gccctaggcg aaaaagggca aaaggtaaaa gatggttttt cttatagttc ggataataat
    34081 cctttatggg caagcgaaaa agaactttta gaaatcatca atcacaccga aggtttttaa
    34141 aatgcttact tattctcatc aaaacatcga tcaaagcgat atagatgcgc ttacaaaagc
    34201 tttaaaagat gaaattttaa cagggggtaa aaaggtagat gaatttgaag aagccctttg
    34261 cgaatatgtg ggcgtaaaac acgcttgtgt attaaactca gctacttcag ctcttcatct
    34321 tgcctacaca gcactaggtg tccaagaaaa aatcgtttta accactcctt taaccttcgc
    34381 tgctacggct aatgcagcct taatagctgg agctaaggta gagtttatcg acattaaaaa
    34441 cgatggcaat attgatgaaa aaaaactaga agcaagactt ttaaaagata gtaaaaatat
    34501 aggagctatt agcgtggtgg attttggggg aaatagcgtt gaaatagatg aaatttcaag
    34561 ccttgctaaa aaatacaata tccctttaat cgatgatgca agccatgctt taggtgcctt
    34621 atataaaagt gaaaaagtag gaaaaaaagc cgatctttct atattttctt ttcaccctgt
    34681 taagcccatc actacttttg aaggtggggc tgtggtgagt gataatgaag agcttatcga
    34741 taaaatcaag cttttaagaa gccatggtat tgttaaaaaa aggctttggg atagcgatat
    34801 ggtagaactt ggctataatt accgcttaag cgatgttgct tgtgctttag ggataaacca
    34861 gcttaaaaaa ctcgatcaca atcttgaaaa aagagaagaa attgcaagtt tttacgataa
    34921 agaatttgaa aaaaatcctt atttttccac gataaaaatc aaaaattata aaaaaagttc
    34981 aagacattta tatcctatct tgctttttcc tgaattttat tgtcaaaaag aagaactttt
    35041 tgaaagctta cttcatgcag gaattggcgt acaggtgcat tacaaaccta cttatgagtt
    35101 tagtttttat aaaaaattct taggagaaat cagactccaa aatgcggata atttttacaa
    35161 agccgagctt agcatacctt gtcatcaaga aatgaatcta aaagatgcaa aatttgtaaa
    35221 agatacttta tttagcattc ttgaaaaagt taaaaaggga tattgtggat aagctagact
    35281 ttagaagcca agattttagc caaactggaa aggctatgta tgaactagct tgtgaacttt
    35341 ttcccatccc tagaagtatc acaggacaag gttttagaga tagcttagaa attttaaata
    35401 aaactctggg gggggggata ctcaaatttc actctataaa aagtggcaca aaggtttttg
    35461 actggatagt tcctgatgaa tggaatgtta aagaagccta tatcatcact ccagagggag
    35521 aaaaaatttg tgattttaaa aagcataact tacaccttct aaactatagc gaagccatcg
    35581 atcaagaaat cgaactagaa gaacttcaag atcatcttta ctccatagaa gaaatgcccg
    35641 atgctattcc ttatgtaacg agttattaca aaaggcgttg gggattttgc ctcacgcata
    35701 atgaaagaaa aaaacttaaa aaaggcaagt acaaagtcta tatcaatgcg aaacatgatg
    35761 aaaatggggt tttggattat gctgatttta tcctacctag tacgcaaaac tcaaaagatg
    35821 aaattttaat ttcaacctat ctttgtcatc cttccatggc aaataatgag cttagtggtc
    35881 ctgtggtggc tattttccta gcaaaatggc ttttgagttt aaaagaaaga aagtataatt
    35941 accgctttgt catcattcct gaaaccatag gctctatagt ctatcttagc aaacatttag
    36001 agcatttaaa aaaacatgtt aaagcaggct ttgtgctttc ttgcttaggc gatgatcatg
    36061 cttactcact catacacaca cccaaaaaaa acactctaag tgataaagtt gccttgcata
    36121 cgcttaaaaa taaaaaaaat ttcaaagctt ttagtttttt agatcgtgga agcgatgaaa
    36181 gacaatacaa tgctccgctt gtaaatcttg gcattgtagg agtatgtcgc acaagatacc
    36241 tagaatacga acaataccac accagcaaag atgatctcaa ttttatctct gaaaaaggtt
    36301 taatgggtgg acttcaaagc atacaagaaa tgattttaaa tctagaaatc aacgctgtat
    36361 atgaaaacac catagtatgc gaacccaatc ttggcaaaag aggactatat cataccctta
    36421 gcactgccaa tgacattcct ttagcttgta attttctagc ttactgtgat ggagagaatg
    36481 atatcatcga tatagccaat atcttaaata tgcaagctta tgaatttaaa gaacttttga
    36541 aaaaaataaa attttatgga ctagcaaaat gaaatatttt ttagaacaca atggcaaaaa
    36601 atactccgat aaggatttaa tagatgcttt ttatcaacta ggtataaaaa ggggtgatat
    36661 tttatgcgta catacagaac ttatgaaatt tggcaaagct ttgcttacta aaaatgattt
    36721 tttaaaaacc ttacttgaat gcttttttaa agtgctaggc aaggaaggca ctcttctaat
    36781 gccaaccttt acttatagtt tttgcaaaaa tgaaacttat gataaagtgc attctaaaag
    36841 caaagtggga gtgctgaatg aattttttag aactagcggg ggggggttag gcgaactagc
    36901 gaccctattt tttcctttgc tgtgaagggt gctaaagcgg atattttttt aaaagaaaac
    36961 tcaagctgtt ttggaaagga tagtgtatat gaaattttaa ctagggaagg tgggaaattt
    37021 atgcttttag gcttgaatta tggacacgcc ctaacgcatt atgctgaaga gagaaatacc
    37081 agcttttgca ggtattttaa ggaatttaag ggctttgtga ttgacgagct aggacaaaaa
    37141 agagaaaaaa ggataaatta ttatgtaaga gacttggaaa aagcctatgt atgcagcctt
    37201 gataagataa atgaaatcgt gcggcaaaca aggtattaca aaagcataaa atttgcagga
    37261 gattttctag aaagctatga tgctaaagaa tatgtcaaag ccataggcaa cgcccttaag
    37321 caggataaat ttgccatata tgaaaagctt cttttatgaa aaacatttaa aggtagttta
    37381 tgaaatattt acttgaattt gaaaataaaa aatactccac ttacgacttc atagaaactt
    37441 tttacaaact aggactacaa aaaggcgata ccttgtgtgt gcatactgaa ctttttaatt
    37501 tcggttttcc cttgctttct agaaatgaat ttttacagac tatattagat tgtttttttg
    37561 aagttatagg caaagaaggc actttgatca tgccaacctt tacttatagt ttttgcaaaa
    37621 atgaagttta tgacaaaata aattccaaaa caaaaatggg agcattaaat gaatattttc
    37681 gcaaacaaac aggagtaaaa cgcacaaacg atcctatatt ttcttttgct ataaaaggag
    37741 caaaagaaga attattttta aaagatacaa caagttgttt tggggaaaat tgtgtttatg
    37801 aggttttaac caaagagaat ggaaaatata tgacatttgg aggccaagga cacacactaa
    37861 cacattatgc agaagaacaa tttaatgtat tttacagata tcataaaatt ttctctggaa
    37921 ttttaattga tgaaaacaat atatcataca ataaaaccat tagttattat gttagaaaac
    37981 ttgacatatc ttctgaaccc aatttaatta acattatcaa tattgttaat aatactaaaa
    38041 attttaaaaa aaacaatttt gcaggagatc atataaatat ttacaacgct aaagaatata
    38101 tagaaatttt atggaaaaaa ttagatataa accaaacaat tctaatagaa aattatgata
    38161 caatatatta attttcaaca ttctcaagaa agtggtatac aatggaaaaa caattttatg
    38221 aaattttaga aaatatactt gaaaccaaag tagatgaaaa tacaaattta agcatggaaa
    38281 actgcaagaa ctggacttct ttagctcata ttgatatcat catgagttta gaagaagaat
    38341 ttgaaatcaa atttaacaaa gaagatttaa gtctcttaaa atctcaaagc gctttactag
    38401 aaaaaattca aaccctaaag gcagaaaaat gaaagaaaat attgaaaaat tatttcaagc
    38461 catcgctcaa aaaaatccta tccattctaa atatcttaaa aaaattgaat tttcacaaga
    38521 agacgaagaa gaatttgata aattaatttc ttattatatt caagatggta tcagtataaa
    38581 agaacaatgc gattgttatt tattgatcct taacgatact ttagaagaaa caaaattttt
    38641 catagaaaat ggggcttatc gttattctag ctttgatgaa gttaaggata aagtttattt
    38701 taatgaaagc tatatgaaac aatacatgat aggcctagct ctttcttctt ttgtttggat
    38761 aactcatatt aaagtgagaa agtatttttc acaatatttg caaaatttca ctccaaaaac
    38821 aacttatttt gaaataggcc ctggccatgg agaatacttc gcaagagcag ttaaaagtgg
    38881 taaattttca gccttttatg gacttgatat ctctccaacg agttgcgaac ttactcaaaa
    38941 aatggtaaaa caacaagtag gaggattgat tacaaaatgc gattttttat gtcaagattt
    39001 ttttacttat gattttgata aaaaagctga tttgatagta attggagaag tgctagaaca
    39061 cgtagaaaaa cctcttgaat ttcttaaaag atctaaagaa cttcttagcg atggaggaga
    39121 aatttttgca actatcccta tcaatgctcc tgctattgat catatttatt tattttccca
    39181 tcctgatgaa gttaaagatt tgatagaaaa atcaggctta aaatttaaag cttatgaatg
    39241 ttttatggca aatgattata gtttggaaaa agcattgaaa tttaaaaatg ctatcactat
    39301 ggcagtagtt ttaaatgctt aatacaacac tcaatttacc ccttcatcat ataggcgtgg
    39361 cttgtaaaaa tttagaaaaa gaaagggaat gtttttttaa actaggtttt tataaagaat
    39421 cagaatttat agatgaaaaa caaggggtaa gaggcgaatt tatcattcct tgtaatgaag
    39481 catttccaca gtatagattt gaacttttgc aaaatttaaa cgataaagga ccactagata
    39541 gctatttgaa aaataatacc aaaatgtatc atttagccta tgaaagtaaa aatatcgccc
    39601 aagatttaat tcttttggaa caacaaggag gcatttgtat tgttcctatt atgcaagcaa
    39661 gctattttgc taaactttgt tttatcatga tgccaaatag gcttttaatc gaacttgtgg
    39721 agctaaaatg aatctttttt caccccattt aaaacgcaat gagcttataa aattcgccaa
    39781 agaattagac tttagtaaaa gtcaagatct tcttattaat gtccatagaa atcatgcttt
    39841 tgaaggagtg caaagtatca ttgctccttt tttacatttt gctaatttaa gagctgagtt
    39901 taatttcagc tcttatgatg atagcttgag ttttgataac tttaaagaag ctagtttaga
    39961 acttttatgg ctagatttaa cccgctataa aaataatgtg caaaatttta tagaagaaag
    40021 acttttagaa ctaagaaaaa tttcacaaaa ccctatttta gttcttagtt taggagaatt
    40081 taaaacagat aaaaaaattt taaattgtga aatttttaac atagaaaaac tcataaaaga
    40141 gtattttgat gaagaagata ttttagactt agctaaagaa gaacttacag gctctaagct
    40201 taataataaa gccttgattt ttttagcaca aattttagga cttagtctca tccctgcact
    40261 tgtaaaaccc gctcttaaag ctcttgtact tgatcttgat aataccttgt atcaaggaat
    40321 tttaggtgaa gagggtatag ataatcttaa tttaagtcct ttgcacaaaa ccttacaaga
    40381 aaaaattaaa acttttaaaa aacaagggtt tttacttgcc ctagcttcaa aaaatgaaga
    40441 aaaagacgca aaaaaacttt ttgaaataag gaaagatttc atcttacaat gggatgattt
    40501 tgatgctaga atgatcaatt gggagccaaa aggtgaaaat atcttaaaaa ttgctaaaaa
    40561 atttaatata aatactaacg ctatgctttt tatagatgat aatatcgccg agcttgaaaa
    40621 taccaaaatt acaggcgtta aaacactttt atgcgatgaa aatatacttt ataaaatcaa
    40681 actttttcct aatcttttaa aactttcaaa taccaaagaa gatcaaattc gtgccaaaga
    40741 tatagcagcc aatgctttaa gagaagagct taaaagctta agcgatgaag aatattttca
    40801 aaatcttgaa atcagcttaa attttagcaa aaatgatctg caaaatatcc ctcgcattag
    40861 cgaactttta ggcaaaacca atcaatttat cgctaattac acacgcttaa atcaagaaaa
    40921 agtcgcacaa cacatgcaaa aagaactcat tgtaagtgtg agtatgagtg ataaattaag
    40981 cgatagtggg attatcgcta tttttgtttt ttcttgtaaa gaaggaaatt tatttatcga
    41041 tgatctttgc atttcttgta gggctttagg tagaaaactt gaaactagaa tgttttttaa
    41101 agcctttgaa ctagctttac atttctttga tcttaaaaac aataatgcaa ggctttatta
    41161 tcaaaaaggc gaaagaaata tgccattttt gagcttttta gaacaaattt ccaaagaatt
    41221 tgaaaaaaac tcagccctta ttccatttca aaatttaaac ttcaaaggac ttataatcca
    41281 tgaaaactag atttgataaa gctaaaattt caggcatttg cgtaagcgta cctgaacata
    41341 aaatttgcat tgatgatgag ttagaaagcg ttttttcaaa cgatatcaaa acccttaaaa
    41401 gaatgaaaaa agtcataggt ttaaacacgc gttatatttg cgatgaaaac acttgcgtaa
    41461 gcgatcttgg aaaacacgca gccaatacac ttttacaagg tttaaatata gataaaaata
    41521 gccttgatgc actcatcgta gtaactcaaa gtcctgattt tttcatgcct tctacggctt
    41581 gttatttaca ccaactttta aatttaagct ccaaaactgt agcttttgat ttagggcaag
    41641 cttgtgcagg gtatttatac ggcttatttg tcgctcattc tttaatacaa agtggcttag
    41701 gtaaaatttt actcatttgt ggagatactt taagcaaatt catccaccct aaaaatatga
    41761 atttagctcc tatttttggt gatggagtaa gtgcaacttt aattgaaaaa acggatttta
    41821 acgaagcttt ttttgagctt ggaagcgatg gaaaatattt tgataaactc atcattccaa
    41881 aaggtgcgat gagaatacct aaagcagata tttttaacga tgattcgctc atgcaaactg
    41941 aggagtttag acaattagaa aacctttaca tggacggagc aaatattttc aatatggctt
    42001 tggaatgcga acctaaaagc tttaaagaaa ttttagaatt ttctaaagta gatgaaaaag
    42061 acattgcttt tcatcttttt catcaatcca atgcgtattt ggttgattgc atcaaagaag
    42121 aattaaaact taatgatgat aaagttccta atttcatcat ggaaaaatac gctaatttaa
    42181 gcgcttgttc actacctacc ctactttgcg aactagatac tccaaaagaa tttaaagcga
    42241 gtttaagtgc ttttggtgca gggcttagct ggggaagtgc ggtgttgaat ttcaaagatt
    42301 tatacacaaa aaatatttta atttacacaa aggagaaata atgacaaaaa ctgaattttt
    42361 agaagagctt aaagaagcta tgcatagaga tgaagactta aatgaagata tgctacttga
    42421 tgatatagat gagtgggata gtttggcttt tgtatctgtg atggtgcttt ataaaaatct
    42481 ttttacttta aaaatcacag ccgaagactt gaaaaattgt caaaaagtaa gtgatttaat
    42541 caatttagca aagcttgatt aaaaccttta aggttttaat cttttatcac taattcaaat
    42601 ttgtcaccca catctttaaa tataaacact ttatttccac aaggataaga gatggaattt
    42661 tcttgcataa aagattttct tttttgcaat ttttcaagca ttaaaggaag ttcttttcta
    42721 aataaggctt tatcaggtat accacaacca tgatctaaat ttttaataaa ttttccatca
    42781 attttatttt catctatcaa atttaagctt acatcatatc ctaaaatttt taatatttgc
    42841 atggtttgtt gtttaaaatt ggcaggcgtt agaggatctt tatcgctatg ataactcaca
    42901 taaataatat ttttattttt ttgactttgc aaaatcaaat gatccttatt taacaatgtt
    42961 ctaataaaat aattttcatt attaaaaaaa taaggtgaat tttctttacg agtccagtgg
    43021 gtttttagaa aaaaaataat cctattatgt ggaaaatctt cataataatc accgtaacta
    43081 tgttccattt ctcttcctaa aatataattt aaaggtggca aagccgaacc cgaattatca
    43141 atcacaccat ccacatacca aggagctatc tttgctatga gtaaagatag gtatcctcca
    43201 taagaccccc ccccataaat ttttggtaaa tctgcaaatt ttggaaagcg tttaactaga
    43261 tcttttaaag cattgatatg atcaatagct gccataatgc catagttttg ataatctcca
    43321 ttaggtggga taaaagttga agtaaaattt agtttaaagt tatgatcgag tttattttgc
    43381 atttttaaat tttctacatg tttcactaaa gaattcgcta aaaaaagcgc attatcatta
    43441 tttatttcac cataagaaaa atgaaactga tttaataaat ttttaatatt ttcaatatct
    43501 tcctcttgaa aatatttgta tgcactatat ttctcaacat c
//
LOCUS       DAPIVO010000007        40920 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.007, whole genome shotgun sequence.
ACCESSION   DAPIVO010000007 DAPIVO010000000
VERSION     DAPIVO010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 40920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40920
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.007"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            59..3423
                     /locus_tag="RJ239_000360"
                     /pseudo
     CDS             59..3423
                     /locus_tag="RJ239_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345045.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3625..5379
                     /locus_tag="RJ239_000361"
     CDS             3625..5379
                     /locus_tag="RJ239_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330511.1"
                     /translation="MFDKIHYYYFNANYEKCLNLSEQFLKESPKFALEFATLSSYKLS
                     LFQKALYYAQELFSLNPTSFNGLMLAKSYIENLRLDEALNLLQTLLTRKDDLEDELKL
                     ELAFIYKLSNKLEESEQIFKELLSKDMYNLNLWKNYAEIYFKHDFTKALNAHEHLCHF
                     MQDLIDKLQKGIIAEQTNLNLVKLEDRLHSKTKENLTISKIEDFLTHQILPQKAYLLF
                     KLFRISDSLELFQSLQEANQHHAQFWQNYAKVLEFNSNYQEAYHAYKKCLSLDSHATY
                     QFDLAYLLMRMGVDDNFEEGKKYYESRLFYAHNETFSTYHYNESLKAFNKFGVDAFKN
                     KEVLVFCEQGFGDTIMYARCLEKLCKIASKVLFAPQSAMYEMFKNQIKFLNQNDDIFK
                     NVKVLKNLPTNFDYAIPICSLPFFIDIKLDEILRLKTPILPQKKPHNQRKKLGIFYAT
                     PNAENSDLLRNVKFEFLFDVLKDLDYEIISFQMQLKEELPKVIEDRSKLIKNWNDTLN
                     YLYDIDCMLSIDSAIAHLSLAMDIPTIVLLHPRFDWRWGKFENPKSYFWPKAKCFIIK
                     EQEETKRNLQKLIKDILN"
     gene            complement(5383..6150)
                     /locus_tag="RJ239_000362"
     CDS             complement(5383..6150)
                     /locus_tag="RJ239_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330512.1"
                     /translation="MKMRYCFILFLSLVLSSNLLANNFSQKKVIKIEKSADSFEVIDL
                     NQNVANPNLNQQKALFDSSTLIEKKSQITKDKDIDFAIVLTSRKNFGYFLDGFRVSDK
                     EFSTLFAKNLIQSLKLNWVNSAANGIYQSPKTLSYFSPKDAKLINVSPFLTQEKDKAK
                     MYAKFTDYVVVVNLQDFYVNITNYFIITSKEGVANVNFKIISTSNGKILVAKNAKLNL
                     TLKNQDAKQNYQDIINQMPKMLADVIKNQIFHLKLLN"
     gene            complement(6190..6954)
                     /locus_tag="RJ239_000363"
     CDS             complement(6190..6954)
                     /locus_tag="RJ239_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HDV7330513.1"
                     /translation="MLNLDKFLEIAINASNQASKAILEERKNFKTWEKEDKSPLTSAD
                     LASNKILNDILGSTDIKILSEEKLLSKEECEELKTFWLIDPLDGTSGFLKGSDEFCVM
                     ISLVHDNRPVLSLIQNPSKGDIFYAHAKTKVYKNDKPLQIDQQEYEKNKYKALLSVNH
                     LSKEDEDFAKEHQLEAINIGSGLKFCAILEARAGVYKRFEKLNIWDIVAGDFLINQNG
                     GFMGDFSKKYILYSPLNYKSSPFICVSSRNFLQDFL"
     gene            complement(7034..8302)
                     /locus_tag="RJ239_000364"
     CDS             complement(7034..8302)
                     /locus_tag="RJ239_000364"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HDV7330514.1"
                     /translation="MSNSVTITDNRNGKSYEFPIYDGTTGPSVVDMSSFYKQTGMFSY
                     DEGLTSTATCKSKITYIDGENGILMHRGYPIEWLAENKLYLDVVHLLLYKELPDATRL
                     EAFRYEMKKRSFIHEGMHRLFDSFPDNAHPMAVLQGAVSSLSAFYPDHLNMNVKEEYM
                     EMAARIVAKIPTIVATAYRYKHGFPMAYPNLDRGFTENFLYMLRTYPYDHVELKPIEV
                     KALDTVFMLHADHEQNASTSTVRAVGSTHAHPYACIAAGIGALWGHAHGGANEGVIRM
                     LEQIGSVDRVDEFIKRAKDKNDPFRLMGFGHRVYKNFDPRAKVLKKLRDQLIDELGID
                     TNLIKVATRIEEIALSDDYFVQRGLYPNVDFHSGLILKALGIPNEMFATLFVIGRTPG
                     WIAQWIEQKEQESLKIVRPRQLYLGETSKI"
     gene            complement(8417..9592)
                     /locus_tag="RJ239_000365"
     CDS             complement(8417..9592)
                     /locus_tag="RJ239_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDV7330515.1"
                     /translation="MHQSVIDPQGLIDLKILIVIALCLLFSPHIAKILRLPLSATEII
                     LGAIIAYFGFIGKSENFALLANVGFYYLMFIAGMEVNLRAFFNMDKEVAKKSFFYIFL
                     LYALSSLIVWIFGLSLVFVIIIPVMSVGLLSLLFKDFGKECYWLNIAMIVATLAEVIS
                     IVLLTIAGAFLREGTGIIDVAQSILYLNIFLGLCLLGFKMLGVLFWWYPQLKVVLMPW
                     EDKNEKDIRFCMAIFILIIVAMVITKLEIVLGSFIAGSFIATFFDHKKDLEHKLSTFG
                     HGFLIPIFFIHIGSTFDLKMILDYKIVLQAFLLMFVMVGLRILCASVFLKRIGFKNMI
                     LFGLSHSMPLTLLIATATLGYSGKVIDEKLYSALILTALFEAIIVMSMIKFLSNSKK"
     gene            complement(9573..10409)
                     /locus_tag="RJ239_000366"
     CDS             complement(9573..10409)
                     /locus_tag="RJ239_000366"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase"
                     /protein_id="HDV7330516.1"
                     /translation="MQIMLCAISNIASGNCSEDCKYCTQSAHVKTDIQKYRRKELSQI
                     VLEAKMAKKNEALGFCLVTAGLGLDDEKLEYVCEAAKAVQKEVPNLLLIACNGMASVE
                     QLKELKKAGIFSYNHNLESSKEFFPQICTTHTWESRFQTNLNAKEAGLMLCCGGIYGM
                     GESEEDRLSFRKSLQELQPFSTPINFFIANENLKLQVPRLSADEALKIVRDTKEALPQ
                     SVVMVAGGREVVLRERQYEIFQAGAGAIVIGDYLTTKGEEPSQDIIKLKEMGFTFASE
                     CH"
     gene            complement(10411..12513)
                     /gene="topA"
                     /locus_tag="RJ239_000367"
     CDS             complement(10411..12513)
                     /gene="topA"
                     /locus_tag="RJ239_000367"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HDV7330517.1"
                     /translation="MKKNLIIVESPAKAKTIGNFLGKDYEVIASKGHIRDLPKSSFGI
                     KIEDDEFIPEYRITSDHSALVKELKSKAKDAKEVYLATDEDREGEAIAYHIAKAIGKD
                     ENTLPRIVFHEITKSAIENALKNPRKLNMHSVNAQQTRRLLDRIVGYKLSPLLGQKIQ
                     RGLSAGRVQSAALKIIVDREKEIRAFVPLEYFSIDMIFQKDLDAELVEFDKAKIEKLT
                     ITNKDRAKLILEACKNEVYSISDIESKERKIAPPPPFMTSTLQQSASNRLGFNPKKTM
                     MIAQKLYEGVNTHEGVMGVITYMRTDSLNLAKEAVENARKFIQANFGKDYLPSKANVY
                     TTKTKGAQEAHEAIRPTNLSFTPEIAAKFLDKDELKLYTLIYNRFLACQMSPAISQTQ
                     NVFVKNDRVVFKISGRKILFDGYYKVYGDMDKDKILPNFKIGQNLKVQNLEMNSHFTE
                     PPSRYSEAGLVKKLESLGIGRPSTYAPTISILTSRDYVTIDKKQLIPSDVAFNVTEVL
                     EKNFSDIVDSKFTSNLENTLDEIAEDKADWQETLKEFYYPFMRKIEEGKTKIASQKTV
                     TKLGESCPDCGGELAIRKGRFGEFVACLNFPKCKYSRNLKSESKNESENTAAKAKANG
                     TGITCPSCQKGEIVERFSKRGKFYGCSAYPKCNFISKYKPSEEKCEECGETLVIKELK
                     KGTFLECLKCKIKKEMKD"
     gene            12708..13981
                     /locus_tag="RJ239_000368"
                     /pseudo
     CDS             12708..13981
                     /locus_tag="RJ239_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345053.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(14009..15274)
                     /gene="secY"
                     /locus_tag="RJ239_000369"
     CDS             complement(14009..15274)
                     /gene="secY"
                     /locus_tag="RJ239_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HDV7330518.1"
                     /translation="MNRALTNKILITLAFLFAYRVLAYVPVPGVNADVIAEFFNNNQN
                     NALGLFNVFSGGAAERFSIISLGIMPYITASIIMELLAATFPNIGKMKKERDSMQKYM
                     QIIRYATIVITLVQSIGVAIGLQSLHGRGGAGAIMVEDLNMFIALCAISMLAGTMLLM
                     WLGEQITQRGIGNGISLIIFAGIVSGIPRAISGTVGQINSGEMNFLTAFAIFALILIT
                     IGVIIYIELGERRIPISYSRKVVMQNQNKRIMNYIPIKLNLSGVIPPIFASAILMFPT
                     TILQTSTNPYLQAINDFLNPNGYLFHVLTFLFVIFFAYFYASIVFNAKDIAENLKKQG
                     GFIPGIRPGEGTSSYLNEVASRLTLSGSIYLGLVATLPWVLVKFMGVPFHFGGTSVLI
                     VVQVALDTMRKIEAQIYMSKYQTLSAVGL"
     gene            complement(15274..15666)
                     /locus_tag="RJ239_000370"
     CDS             complement(15274..15666)
                     /locus_tag="RJ239_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HDV7330519.1"
                     /translation="MNLTKAAGSTHKTKRIGRGQGSGMGKTATKGGKGQTARKGYNEK
                     RGFEGGQQPLQRRLPKVGFTSKIQKPYVINVEKITAVKELSEITFESIKSVHKISKSV
                     NKIKLIGASAKDLVSKIKDENISVTGSK"
     gene            complement(15671..16114)
                     /gene="rpsE"
                     /locus_tag="RJ239_000371"
     CDS             complement(15671..16114)
                     /gene="rpsE"
                     /locus_tag="RJ239_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HDV7330520.1"
                     /translation="MEKYNREEFEEVIVDIGRVTKVVKGGRRFRFTALVIVGNRKGLV
                     GVGYGKAKEVPDAIRKAVDDAFKNIVEVKTKGSTIAHDVEVKYNASRILLKPASEGTG
                     VIAGGSTRPIVELAGIKDILTKSLGSNNSANVVRTTIKALTMLKG"
     gene            complement(16126..16482)
                     /locus_tag="RJ239_000372"
     CDS             complement(16126..16482)
                     /locus_tag="RJ239_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HDV7330521.1"
                     /translation="MRANVLKRKLTLRIKRKKRIRAKISGCENFPRISVFKSNRTLYI
                     QAIDDVKAVTLAAVDGRKLGVKANKEGAKKIAAEFAKTLKVKKIEQAVFDRNGYVYHG
                     VIAALAESLRENGIRL"
     gene            complement(16492..17028)
                     /gene="rplF"
                     /locus_tag="RJ239_000373"
     CDS             complement(16492..17028)
                     /gene="rplF"
                     /locus_tag="RJ239_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HDV7330522.1"
                     /translation="MSRIGKQPIAIPAGVEVKLEGNLLKFKKGNLAKELDTKANVNVE
                     IKDNNILFSPKGEDRQSRAYWGTYRALAYNIVVGLTQGFSKTLEINGVGYKAALKGKV
                     LELSLGFSHPINYDIPEGIEIVVDKNTIAVKGSDKQVVGQVAAQIREFRPPEPYKGKG
                     VKYSDERIIRKAGKTSKK"
     gene            complement(17107..17502)
                     /gene="rpsH"
                     /locus_tag="RJ239_000374"
     CDS             complement(17107..17502)
                     /gene="rpsH"
                     /locus_tag="RJ239_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HDV7330523.1"
                     /translation="MINDIISDSLTRIRNAGMRKLETTKLLHSKVVEALVGIFQAKGY
                     IESFNVIEEDKKKFINVVLKYDEKGKSVINELKRISKPGRRVYKGKDEIKRFKNGYGT
                     IVVSTSHGVLANDEAYKAGVGGEILCTIW"
     gene            complement(17512..17697)
                     /locus_tag="RJ239_000375"
     CDS             complement(17512..17697)
                     /locus_tag="RJ239_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001085694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HDV7330524.1"
                     /translation="MAKKSMIAKAARKPKFKVRAYTRCQICGRPHSVYRDFGICRVCL
                     RKMGNEGLIPGLKKASW"
     gene            complement(17699..18244)
                     /gene="rplE"
                     /locus_tag="RJ239_000376"
     CDS             complement(17699..18244)
                     /gene="rplE"
                     /locus_tag="RJ239_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HDV7330525.1"
                     /translation="MMRLKEKYNQSIKPALVKEFDIKNPMLIPVIEKVVISVGAGELA
                     KDQKVLQNVADTISLIAGQKAVITKAKKSVAGFKVREGFPVGVMVTLRKENMYAFLDK
                     LISIALPRVKDFRGLSRDGFDGRGNYNFGLDEQLMFPEVEYDKILRTHGMNISIVTTA
                     QNDKQAQKLLELIGVPFTKGK"
     gene            complement(18248..18481)
                     /locus_tag="RJ239_000377"
     CDS             complement(18248..18481)
                     /locus_tag="RJ239_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HDV7330526.1"
                     /translation="MAVKLKIKKGDSVKVITGDDKGKTGKVLAVYPKTLKVVVEGCKI
                     AKKAIKPSEKNPNGGFINKEMPMDISNVAKVQE"
     gene            complement(18481..18849)
                     /gene="rplN"
                     /locus_tag="RJ239_000378"
     CDS             complement(18481..18849)
                     /gene="rplN"
                     /locus_tag="RJ239_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015106543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HDV7330527.1"
                     /translation="MIQSFTRLAVADNSGAKELMCIKVLGGSKRRYATVGDVIVASVK
                     KALPNGKVKKGQVVKAVIVRTKKEIHRDNGSLIRFDENAAVILDNKREPIGTRIFGPV
                     GREVRYGGFMKIVSLAPEVL"
     gene            complement(18849..19100)
                     /gene="rpsQ"
                     /locus_tag="RJ239_000379"
     CDS             complement(18849..19100)
                     /gene="rpsQ"
                     /locus_tag="RJ239_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HDV7330528.1"
                     /translation="MAFKREIQGVVVKIAGEKTASVLVERKVVHPRYRKIVKRFKKYL
                     IHDERNEVKVGDTVVAVECRPLSKRKSFRLKSVLATGVE"
     gene            complement(19110..19295)
                     /gene="rpmC"
                     /locus_tag="RJ239_000380"
     CDS             complement(19110..19295)
                     /gene="rpmC"
                     /locus_tag="RJ239_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HDV7330529.1"
                     /translation="MKYTEIKDKTAAELATMLKEKKVLLFTLKQKLKTMQLTNPKEIS
                     QVKKDIARINTAINALR"
     gene            complement(19282..19707)
                     /gene="rplP"
                     /locus_tag="RJ239_000381"
     CDS             complement(19282..19707)
                     /gene="rplP"
                     /locus_tag="RJ239_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HDV7330530.1"
                     /translation="MLMPKRTKYRKMMKGRNRGYANRGTEFTFGEFALKATEAGRINS
                     RQIEAARIALTRFVKRQGKTWIRVFPDKPLTKKPLETRMGKGKGAVEEWVMNIKPGRI
                     IYEMAGVSEEMAREALTLAMHKLPFKTKFVTRESQNEIY"
     gene            complement(19710..20411)
                     /gene="rpsC"
                     /locus_tag="RJ239_000382"
     CDS             complement(19710..20411)
                     /gene="rpsC"
                     /locus_tag="RJ239_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HDV7330531.1"
                     /translation="MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLK
                     RKLYYAGISQILVERTAKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLIGKDVNIN
                     IKEERKAGASAQLAAESVATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGA
                     EMARTEWYLEGRVPLHTLRAKIDYGFAEARTTYGNIGVKVWIFKGEVLHKGMQPEKTE
                     ESAPAKKPRRTRRGK"
     gene            complement(20411..20836)
                     /gene="rplV"
                     /locus_tag="RJ239_000383"
     CDS             complement(20411..20836)
                     /gene="rplV"
                     /locus_tag="RJ239_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HDV7330532.1"
                     /translation="MSKALIKFIRLSPTKARLIAREVQGMNAELAMASLKFMPNKGAK
                     YIANAISSAVANGGFEANEVIVKSCRVDAAAVLKRFRPRARGSASRIRKPTSHILVEV
                     AKAEVKSEEKKTVAKKTTTTKAPAKKTTSTKKATVKKES"
     gene            complement(20847..21128)
                     /gene="rpsS"
                     /locus_tag="RJ239_000384"
     CDS             complement(20847..21128)
                     /gene="rpsS"
                     /locus_tag="RJ239_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HDV7330533.1"
                     /translation="MARSLKKGPFVDDHVMKKVIAAKKANDNKPIKTWSRRSTITPDM
                     IGLTFNVHNGKSFIPVYITENHIGYKLGEFAPTRTFKGHKGSVQKKIGK"
     gene            complement(21130..21960)
                     /gene="rplB"
                     /locus_tag="RJ239_000385"
     CDS             complement(21130..21960)
                     /gene="rplB"
                     /locus_tag="RJ239_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012660814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HDV7330534.1"
                     /translation="MAIKTYKPYTPSRRYITGLSSEDITAKPSVRSLLVKLPAHAGRN
                     SYGRITSRHKEAGAKKLYRIIDFKRRKFGIEGKVEAIEYDPYRNCRIALIAYKDGEKR
                     YILQPRGLSVGDIVAAAESGLDIKPGNAMKLKNIPVGTIVHNVELKPGKGGQMIRSAG
                     AYAQLMGKEEKYVILRLASGEMRQVLAECMASIGEVGNEEWANVTIGKAGRNRHRGIR
                     PQTRGSAMNPVDHPHGGGEGKKNSGRHPVTPWGKPTKGAKTRRKKASDKLIISRRKGK
                     "
     gene            complement(21962..22243)
                     /locus_tag="RJ239_000386"
     CDS             complement(21962..22243)
                     /locus_tag="RJ239_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HDV7330535.1"
                     /translation="MADITDIKTILYTEKSLNLQEQGVVVIQTSPKMTKTGLKAVLKE
                     YFGVTPKSINSLRMDGKIKRFRGRLGQRNNYKKFYVKLPEGVSLENTEA"
     gene            complement(22246..22860)
                     /gene="rplD"
                     /locus_tag="RJ239_000387"
     CDS             complement(22246..22860)
                     /gene="rplD"
                     /locus_tag="RJ239_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HDV7330536.1"
                     /translation="MSKVVVLNDKLEKAGELDLPSKYAEVNPHNLYLYVKSYLASLRA
                     NTAHTKGRSDVSGGGKKPWRQKGRGGARAGSTRTNVWVGGAVAFGPTNERNYFQKVNK
                     KQKRLALERALADKAAKGVLFTADSLAIESGKTKDANAVIKKLGVKDALIVKDLLDEK
                     TLLAYRNLANCYVVDVTEVNAYLVSVFNAVIMEKSVLESITKEG"
     gene            complement(22857..23432)
                     /locus_tag="RJ239_000388"
     CDS             complement(22857..23432)
                     /locus_tag="RJ239_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HDV7330537.1"
                     /translation="MEYIVEKIGMSRTITNPSIAVTLLRVVNAKVCEVEGGKALVAYP
                     KGKASNKCVAGQQKKYNLSAEYNRFATLEVANTEAGDLDETPLNEAKILKVSFNTKGR
                     GYSGVMKRHNFAGGPASHGSRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTIKNE
                     VVSYDAENKILVVKGAVPGYNGAMGKIRIAK"
     gene            complement(23442..23753)
                     /gene="rpsJ"
                     /locus_tag="RJ239_000389"
     CDS             complement(23442..23753)
                     /gene="rpsJ"
                     /locus_tag="RJ239_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HDV7330538.1"
                     /translation="MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKI
                     KRYTVLKSPHINKDSREQFEIRIHARMLDIVAATPDTVDSLTKLDLAPEVSVEVRAMG
                     K"
     gene            complement(23952..24713)
                     /locus_tag="RJ239_000390"
     CDS             complement(23952..24713)
                     /locus_tag="RJ239_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HDV7330539.1"
                     /translation="MRINKFISHNTRYSRREADELIKQGLVKINNKIALLSDEVKFDD
                     KVFVKGKRVQKRTQFSVIIYHKQKGEIVSKKDDRGRKTIYDTLPRQFSTWLSVGRLDY
                     ASEGLLLLTDSPVIADALMHSDLEREYYLKVKGTVSKQVIEAMQNGLEIKNEKKGAHA
                     KTKITSMSFAPFIDFEIFGSSGGYTKLRVVINEGKNRELRRFFGHFDLEVMDLKRVAF
                     GALDLGMLKAGKHRYLENGEYEKLRDFLKFNEIRY"
     gene            complement(24749..26743)
                     /locus_tag="RJ239_000391"
     CDS             complement(24749..26743)
                     /locus_tag="RJ239_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HDV7330540.1"
                     /translation="MNMDENKEINKNEQNPNSNSKNNKRYKYKNRRKKLADSLQNEND
                     TPKIDQNSNKENSENSENKTEKKKKKNRNLPSKLTGNEDWQIALAECIEANRISHENR
                     LHPLKYNNSSEHKIRITPLGGLGEIGGNISVFETNKDAIIVDIGMSFPDGTMHGVDII
                     IPDFDYVRKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEH
                     GLKAERKWFRPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKID
                     QTPIDGYPTDLGRLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFARTKGR
                     VIMSTFSSNIHRVYQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDAD
                     EVSKYKDNEVLIVTTGSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASV
                     SAVLDYLLKAGAKVAYQEFSEIHVSGHASIEEQKLMLTLTKPKFFLPVHGEYNHITKH
                     KETAMKCGIPERNIYLMSDGDQVELCQKYVKRIKTVKTGKVFVDNQINKQIADDVVID
                     RQKLADSGIVVIIAQIDKATKTLINKPRVFSYGLVADKHDHAFSKDMAEVLGQFFINV
                     KDEVLNDPRFLENQIRQVLRKHIFRKIKKYPTIVPTIFVM"
     gene            complement(26712..27512)
                     /gene="rsmA"
                     /locus_tag="RJ239_000392"
     CDS             complement(26712..27512)
                     /gene="rsmA"
                     /locus_tag="RJ239_000392"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HDV7330541.1"
                     /translation="MVKAKKQYGQNFLIDKSVLAKIIQAIPKEMNNIIEIGPGLGDLT
                     QELLKISQVKAYEIDNDLIPILKKKFQKELECGKFNLIHQDASEAFNPSLDEKPYFLV
                     ANLPYYVASHIILKALEDKNCLGLIVMAQREMAEKFCAKEGNSEFSSLGVLSAMICER
                     KILFDVDPQCFNPPPKVMSAVMSLIKTKDFDELCEIENFKNFLKDCFKAPRKQLLGNL
                     KTYKAKVLEVLSTLGLKENIRPHEICVDLYLKIYDKLKDEYGRKQRDK"
     gene            27594..28130
                     /locus_tag="RJ239_000393"
     CDS             27594..28130
                     /locus_tag="RJ239_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDV7330542.1"
                     /translation="MIICAGGNENFSFAKAIGIGLVESAFHLSQLCFKEKPSKLIFIG
                     TCGLYDKGEILEIYRSSHAFNVEFSKISHAFYTPAKYEICLEKENVSRETIKINSSNY
                     ICQNSKAAKEFSKLGFFAENMEAFSVLSVAKNLNIDAECILCATNFCNENAHEDFIKN
                     HQKAKENLEEYLKKYHYI"
     gene            28153..29223
                     /gene="rlmN"
                     /locus_tag="RJ239_000394"
     CDS             28153..29223
                     /gene="rlmN"
                     /locus_tag="RJ239_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HDV7330543.1"
                     /translation="MKELVNILDFLPEELGEKIKPMFRVKQIYQWIYQKYANNFSDMS
                     SLPKDLRLELAQNFHFSPVKCVKNEQSKDGSIKYLFELIDGLRVESVLLPMKEEKIDA
                     EGKRISHARYTICVSSQVGCKSGCSFCLTAKGGLKRNLSAGEIVGQILWIKKQNNIPY
                     ERRVNIVYMGMGEPLDNLKNVSKAVKILAQNEGLAISPRRQTISTSGLAKQIKELGQM
                     NLGVLLAISLHAVNDELRTELMPINKAYNIAAIMDAVREFPIDQRKRVMFEYLLIDGI
                     NDKLEHAKELVKLLNGIKAKVNLILFNPHEGSLYKRPSLENAIKFQDLLSNKGVTCTI
                     RESKGLDISAACGQLKERAKEQ"
     gene            29220..29318
                     /locus_tag="RJ239_000395"
     CDS             29220..29318
                     /locus_tag="RJ239_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330544.1"
                     /translation="MTMLDIFEIIFITTVVIIGFGGIVFVVTKEKK"
     gene            complement(29332..29408)
                     /locus_tag="RJ239_000396"
     tRNA            complement(29332..29408)
                     /locus_tag="RJ239_000396"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(29372..29374),aa:Met,seq:cat)
     gene            29544..29631
                     /locus_tag="RJ239_000397"
     tRNA            29544..29631
                     /locus_tag="RJ239_000397"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:29578..29580,aa:Ser,seq:gga)
     gene            29678..29753
                     /locus_tag="RJ239_000398"
     tRNA            29678..29753
                     /locus_tag="RJ239_000398"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:29711..29713,aa:Ala,seq:ggc)
     gene            29757..29832
                     /locus_tag="RJ239_000399"
     tRNA            29757..29832
                     /locus_tag="RJ239_000399"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:29790..29792,aa:Val,seq:gac)
     gene            29860..30390
                     /locus_tag="RJ239_000400"
     CDS             29860..30390
                     /locus_tag="RJ239_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV7330545.1"
                     /translation="MQNTIIQKAVNKDLNSILEITKDALNAMKTMNFHQWDENYPNEI
                     VFQEDIQAQELYVFKENDEILGFICINEKFKPEFYKQVIFNKNYDDKAFYLHRLAVKQ
                     NAKGKGVAQKLLNFCENFALENHKASLRADTHSKNFPMNSLFKKLDFNFCGNFDIPNY
                     QDPFLAYEKILNQKAF"
     gene            complement(30370..30972)
                     /gene="leuD"
                     /locus_tag="RJ239_000401"
     CDS             complement(30370..30972)
                     /gene="leuD"
                     /locus_tag="RJ239_000401"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HDV7330546.1"
                     /translation="MQKFIIHKGIACPLEYANIDTDQIIPKQFLLAVSKQGFGKHLFH
                     DLRYLDDKESVLNMDFNLNKKEYQNSSILVSFENFGSGSSREHAPWALVDYGIRAIIA
                     PSFADIFKNNALGNGLLTIELAKDEVLEIVDELKKSQDKNIEISLLEKRVFFKDKIFS
                     FDLDDFHRICLLEGLDNIALTLKHEAQIKAYEKNSKSFLV"
     gene            complement(30974..32386)
                     /gene="leuC"
                     /locus_tag="RJ239_000402"
     CDS             complement(30974..32386)
                     /gene="leuC"
                     /locus_tag="RJ239_000402"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HDV7330547.1"
                     /translation="MTMAKTLYEKVFDAHVVYEGKNELPILYIDRHLIHEVTSPQAFS
                     GLKMAKRRMARADLTLATIDHDVSTKSMDLNACSDMAKEQITTLMQNTKEFGVRLLGL
                     GDKNQGIVHIVGPELGFTLPGVTLVCGDSHTATHGAFGALAFGIGTSEVEHVMATQTL
                     KQAKLKTMKIECKGQFQKGVYTKDLILYLIAQYGTAKGTGYAIEFCGELIRNLSMEAR
                     MTLCNMAIEFGAKVGMIAPDEITFEYIKGKEFAPKGEEFQKYCEYWKSLRSDEGAKYD
                     ASITLDVSKIKPQISYGTNPSQVIGIDEKIPKISDFKNQSEQKSLLDALYYVNLEQDQ
                     VIEGVKIDIVFIGSCTNGRLEDLKIAADILKGLKIHKNVKALIVPGSMQVRKEAENLG
                     LDKIFIEAGCEWRYAGCSMCLGMNDDKANSGQRVASTSNRNFVGRQGKGSITHLMSPA
                     SAAACAIEGVICDNRKYLGV"
     gene            complement(32373..33449)
                     /gene="leuB"
                     /locus_tag="RJ239_000403"
     CDS             complement(32373..33449)
                     /gene="leuB"
                     /locus_tag="RJ239_000403"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HDV7330548.1"
                     /translation="MKTYKVAVLAGDGIGPLVMKEALKILTFIAQKYNFSFEFNEAKI
                     GGASIDAYGVALSDETLKLCEQSDAILFGSVGGPKWDNLPIDQRPERASLLPLRKHFN
                     LFANLRPCKIYESLTHASPLKNEIIQKGVDILCVRELTGGIYFGKQDLGKESAYDTEI
                     YTKKEIERIARIAFESARIRKKKVHLIDKANVLASSILWREVVANVAKDYQDINLEYM
                     YVDNAAMQIVKNPSIFDVMLCSNLFGDILSDELAAINGSLGLLSSASLNDKGFGLYEP
                     AGGSAPDIAHLNIANPIAQILSAALMLKYSFKEEQAAQDIENAISLALAQGKMTKDLN
                     AKSYLNTDEMGDCILEILKENDNG"
     gene            complement(33446..34981)
                     /gene="leuA"
                     /locus_tag="RJ239_000404"
     CDS             complement(33446..34981)
                     /gene="leuA"
                     /locus_tag="RJ239_000404"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HDV7330549.1"
                     /translation="MKDNKIIIFDTTLRDGEQALGSSLSINQKLQIALALENLGVDVI
                     EAGFPVSSQGDFKAVQKIASKVKNSTICALSRALDKDIDMAYEALKVAKHFRIHTFIA
                     TSTLHMQDKLKKDFDEILSMAKRAIIRARSYTDDVEFSCEDAGRTPIDNLCFMVENAI
                     KAGAKTINIPDTVGYTLPSEFANIIKILFNKVPNIDKAIISVHCHNDLGMATGNSLSA
                     ILQGARQIECTINGLGERAGNCALEEVVMAIKTRKDYLKGFYTDIKCENIFKTSKLVS
                     AITNESIPSHKAIVGSNAFSHSSGIHQDGVLKNRQTYEIISPSAIGIHENRMLMTARS
                     GRAMIKTCLENLGYDENTYNLDDVYERFLRLADKKGQVYDYDLEALMFLSYESEEENE
                     FVLEKLSVISGNIPTACVCMRIKEELKTEACTGNGPVEAVFNCIARITNLKPALKAYS
                     INAKSSGVDAQGQVDVDLEFKGRKFHGKGLSTDVIEASAQAFVSAYNAIYRSLKVEER
                     KMA"
     gene            35301..35930
                     /locus_tag="RJ239_000405"
     CDS             35301..35930
                     /locus_tag="RJ239_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330550.1"
                     /translation="MLKELLEIKKEMEPVIHEANVKLNVLAREVIVRKKEYEIYGPMV
                     DRVYLDNAIYVKVMSSGRDVKTDNVTIKNGFYMVFVAPEKESTKDIKNKLKVAYEGLD
                     NKFIATLIRSCQRFKEIINKTQATLAKASKMNVVVKTNLGEASAALKFNITIEYTKEN
                     QKLTRENSKSAGSFRDTKTYINLVVEKNTDSQICEKLLDDVEKYFIGGG"
     gene            complement(35954..36598)
                     /locus_tag="RJ239_000406"
     CDS             complement(35954..36598)
                     /locus_tag="RJ239_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HDV7330551.1"
                     /translation="MNKKFLSIIAGIALFSSSAFAEEKSGFFIGADAAYVQTKVQGNL
                     KHNQTGAVFNGDLSSSIPILGLKAGYRFNDLHRLYLAYNYSDEFSDIIRTPKLKIESD
                     FSTHKFLMGYDFTPKIFERVRAVAGGYLGYAKTNLDLKTSLLSLSQKFDGFVYGVKIG
                     AIFELGASNEIEAGFKVEKIEYNTRDFYQKAIGSNLYDPRQTNYGLYLGYTYKF"
     gene            complement(36844..37172)
                     /locus_tag="RJ239_000407"
                     /pseudo
     CDS             complement(36844..37172)
                     /locus_tag="RJ239_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779367.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
     gene            complement(37349..37732)
                     /gene="queF"
                     /locus_tag="RJ239_000408"
     CDS             complement(37349..37732)
                     /gene="queF"
                     /locus_tag="RJ239_000408"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HDV7330552.1"
                     /translation="MRYGEKEIKEFDVENMEIWPNDAKNDYIIKITLPEFMCCCPRSG
                     YPDFATIYLEYMPDKFVVELKAIKLYINTFMYRNVSHEASINEIYNTLKDKLKPKWIK
                     VVGDFNPRGNVHTVIECRSDMVVPK"
     gene            37892..38491
                     /locus_tag="RJ239_000409"
     CDS             37892..38491
                     /locus_tag="RJ239_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDV7330553.1"
                     /translation="MKKSIAIIGGSIAGLSAALFFASAKNEELDFDITVFDEGKADLK
                     AAAIYNVPFFPKGAKADEIYTHIKAQIASMLEVKYIDSKVVSISGEKGDFTVNDEQGL
                     GIKADYIIVATGANKSDIKELEDFVIPHELMPKPNKFCFKHHGRQIIKEGIYAAGLAS
                     GVTTMVACAMGSANEAACAILSDIKGAVSVYHDTPTTRV"
     gene            complement(38496..39377)
                     /gene="metA"
                     /locus_tag="RJ239_000410"
     CDS             complement(38496..39377)
                     /gene="metA"
                     /locus_tag="RJ239_000410"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HDV7330554.1"
                     /translation="MPLIIPENIPAYELLKEHAFIMGLRRAKHQDIRPQEILIVNLMP
                     KKIETENQILSLLANSPLQVNITLLATTSYVGKNTPFTHLEKFYKGLEEVKKHKFDGA
                     IVTGAPVEQMDFEKVAYWEELLEIFDFLKQNVTSSMYICWGAMAALKYFYGVDKISLD
                     KKIFGVYKHDKVSPDLLLTNLDEKVLMPHSRHSSMDEEQILALQKQGKLKILLRNKKI
                     GSALLRDEKNIFILGHLEYFKETLHQEYVRDNFIQKAKNYYDKKGNIKYNWRSNANTI
                     FANWLNYDVYQSTPFVL"
     gene            complement(39460..40731)
                     /locus_tag="RJ239_000411"
     CDS             complement(39460..40731)
                     /locus_tag="RJ239_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase/cysteine synthase"
                     /protein_id="HDV7330555.1"
                     /translation="MNFNKETLALHGAYNFDTQRSISVPIYQNTAYNFENLDQAAARF
                     NLQELGNIYSRLSNPTSDVLGQRLANVEGGAFGIPVASGMAACFYALINLASSGDNVA
                     YSNKIYGGTQTLISHTLKNFGIEAREFDIDDLDSLEKVIDQNTKAIFFESLSNPQIAI
                     ADIEKINQIAKKHKIVSICDNTVATPFLLQPFKHGVDVIVHSLSKYVSGQGTALGGAL
                     IERKDLNDLLKNNDRYKAFNTPDPSYHGLNLNTLDLPIFSIRVIITWLRDLGASLAPQ
                     NAWLLLQGLETLAVRIEKHSQNAEKVANFLNSHPDIKGVNYPTLASNAYHNLFKKYFD
                     KNFASGLLSFEAKDYEHARRICDKTQLFLLAANLGDSKSLIIHPASTTHSQLSEEELQ
                     KAGITKATIRLSIGLENSDDLIADLKQAIES"
BASE COUNT        13192 a         7244 c         6015 g        14469 t
ORIGIN      
        1 ttatattatt tttaaaaaat ataatatata gaacaaatta taaagggagg aaaatcttat
       61 gaaaaatatc acattaacta aaatacctat aggagagggc aaagaaccct gtttaaattc
      121 taaaaagata gttttatctt tagctactat ttcttttttg gcaagttgtg ctaatgctaa
      181 attaaattct gaaataaaaa cttatgatga agttaataaa aatgttaaaa ctagatcagc
      241 aagtgtttat agccctcaag ctaagatcaa tacgactata aattctttac acaatcaaca
      301 agtaactatt actggaaatg gaacatcaaa ttctttaaca atcggatcaa gtggaactct
      361 aggtagcata ggcaatacag gtaaaatcat ctatgcccat gctaatggta gcaacactct
      421 tactcttgca aatcttacta ataatagaac tattaatggt aagattggta tagaaaacaa
      481 tggtaatttt acaggaacta ttgctgtcaa cacctttgaa aatacaggtc aaattaatgg
      541 acaaatttac atgggaattt ggggtaacaa ctcaggaact cttaatatag ataaatttga
      601 caatagtgga accataattg acaacaataa aggagttttt ttgaaggaaa gaataccaac
      661 atacaaacct ttaataacag tggttttatt agtgcaaata agggtgtaga tataggcaac
      721 ataggaacca taaaaaattt taataacaac ggaactatac aaggctcaga agtgggagtg
      781 gctataaata caaaaataga tacttttact aataatggtt ttattaattc ccctggtagt
      841 ggacaatgga ataatggtat atggataagt agcaatgcta ccatagaaaa gcttgttaac
      901 aatggcacaa taaaaggagg acattctgct ataatggtaa catctcagca tataaaaact
      961 gttgaaaata caggaattat acatgctgaa ggagaatggg gttctagtat attattagaa
     1021 tatggtggtt ttatagagca tataatcaat actggaacca taagtagtaa taatgttggt
     1081 ataggttcag cttatggagt atttggaaca cttactataa aagatggagg tcaagtttat
     1141 gcaaaataca cggcaatagg agtgggtcga tcgcaaactc taggagattt atatatagat
     1201 ggacgttcaa ataatggcac agtaagtgga atttatagtg aggaacatgg aattttatta
     1261 gagaataact cacaaactca aaaaatagaa cttaaaaatg gcggcattat aaaaggtaag
     1321 atcgatggta taagattgat aaactcggcc tctttaagtg gagaaatgat tttatctggc
     1381 gaaggttcta gggtagaagg tggaagaggt gttggtatat tgaatcgaag tggaaaaata
     1441 gaaggctcta taaccataaa agatggagca actgttacag ctacttcgaa tcgagccata
     1501 gctaactctg gctcaggaag tataacaggt ggtattactg ttagtgggaa aaacactaaa
     1561 cttgaaggaa atataatcaa tacaggtaat gcttctatag gtagtgatat caagatagaa
     1621 ggtggagcta aggtagaagg tggtcttgtt aatcaaggta atggaagtat ctcaggaagt
     1681 gttcaagtaa gtggtggtag tagtattgat tccattacca atgagggtaa tggagctatt
     1741 tctggttcaa ttactgtaga taaaaatagt aaacttgatt ctatcactaa cacttctaca
     1801 tcatctacag gtataagtgg ttctattact aacaatagtg ataataaact tgaaatttct
     1861 aattcaggta atatcggtgg taagattgaa agtacaggta gtgctgatat ggtgattagc
     1921 aatagtaatg gtggaactat tagtggcggt attagttctt caggaagtgg aagcactagt
     1981 atttccaatt cacagggctc aaccataaat aacggcatca ctgtttcagg atcagcacaa
     2041 gttgaaatct ccaatcaagg ctcagtaggt aaagatgaaa atggtaatac agtaactaac
     2101 aatggtagtg gtagtgttgg aatcaaagat tggcttgttt ctacagataa aaacacaggt
     2161 aaattaaaca ctgtggttat aggtggaagt ggtaaagata atgtaaaagt agaaaacatc
     2221 accgtagatc aaagcaatgt tgatcttgat gaattagaca atatcaatca tatcatctca
     2281 ggtgttaatc aaggcaatat tggcaatata ggaaccaatg gaggtggaga aatatcttta
     2341 agctttgatc caataacagg aaagcttact acagatttta atcttaatgc ttccatatca
     2401 ggtgcaacct ttagatcttt aatctctact acttcaagaa gatcaacctt tatagataat
     2461 gttatgggta attctatgca aagctttgct ttagcttctt caagtaaatc tcaaagcatt
     2521 gctatgtctg aaaagggtaa tttatatgca gatgcaagtg attatataaa gagtgattta
     2581 aataatggaa gctatggttc taataaagaa cattctttat tcatccttcc ttatacttct
     2641 tcacagaatg ttgaactttc tttaaatgaa gaaagtaaag gacacgctaa aggaaccatt
     2701 ataggttatt ctactttaaa agacagtgga atatatggtg tgtatgcagg ttatgaagat
     2761 agaaaaatgg gttcaactta ttttgatatt aataatagaa cctattatgc aggtttaaaa
     2821 tactttaata ccttatttac tacagaaaaa ggtcaagaag tttatatcaa agctcaaggt
     2881 aaagctgctt tgattaaaaa tgatttaact aaaaaaatag gaaataatga agctaaagct
     2941 gaacctaatt cttatgctta tggagtcaat acagccttag gtatgaattt tatttctaat
     3001 aaagatatat tctctcctga aataggtctt gcttatgaag gaggttatac tgaagctttt
     3061 tctatgaaag acaccatagg acaagcaaca gttaaaggtg gagaaagaac ctatgcaaac
     3121 tatttaaatc ttttctctac taaaacaagt cttacttggt ttagagattg gttgcctaat
     3181 ttaaaaactt cagtagaact tggagctaag tttaatatca atcctaaagt agaagctgag
     3241 gctagatttg gtaatataaa agtaagtgat gagtttgatt taccaagagt acaaaaattt
     3301 gtaagcactt cttttatcgt tcctgttaat gaagctttct attttagttt aagctataat
     3361 ggaatgtttg ataaagatgg caatacccat acaggatttg ctcagtttaa ttatctttgg
     3421 taatcttata aaagataata cttagtttaa ttagtttact ctcctacttg ttaaaaattt
     3481 catcctgata attttaaaat tattaggatg gatgttttta ttgtatttat ttttgtttta
     3541 ttatttaatt ttataaaaat ataattatct ttttatgcaa cttataagat aatattggat
     3601 ttaatgtaac catcaaggaa aaatatgttt gataaaattc attattatta ttttaatgct
     3661 aattatgaaa aatgtttgaa cttgagtgag caatttttaa aagaaagtcc aaaatttgct
     3721 ttagaatttg ctacgctttc ttcttataaa ctttctcttt ttcaaaaagc tttatattat
     3781 gctcaagagc ttttttcttt aaatcctaca agttttaatg gtcttatgct tgctaaaagc
     3841 tatattgaaa atttaagact tgatgaagcc ttgaatttat tacaaacact tttaactcgc
     3901 aaagatgatt tagaggatga acttaagtta gaattggctt ttatttataa actgagtaat
     3961 aaactagaag aatctgaaca aattttcaaa gaattgcttt ctaaagatat gtataatctt
     4021 aatctatgga aaaattatgc agaaatttat tttaaacatg attttactaa ggcattaaat
     4081 gcacatgagc acttgtgtca ttttatgcaa gatttgattg ataaactaca aaaaggaatc
     4141 attgctgaac aaaccaatct taatttagtc aaactcgaag ataggcttca tagtaaaacc
     4201 aaagaaaatc ttaccatttc taaaatagaa gattttttaa ctcatcaaat tttaccccaa
     4261 aaagcatact tgctttttaa gctttttaga atatctgatt ctttagaact ttttcaatca
     4321 ctacaagaag ccaatcaaca ccatgcacag ttttggcaaa actatgctaa ggtattagaa
     4381 tttaactcaa actatcaaga agcttatcat gcttataaaa aatgtcttag cttggattct
     4441 catgcaacct atcaatttga tttggcttat cttttgatgc gtatgggagt ggatgataat
     4501 tttgaagagg gcaagaaata ttatgaaagc agattatttt atgctcataa tgaaactttt
     4561 tctacttatc attataatga aagcctaaaa gcttttaata aatttggcgt tgatgctttt
     4621 aaaaataaag aagttttagt attttgcgag caaggctttg gcgatactat aatgtatgca
     4681 agatgcttag aaaaactttg caaaatcgct tcaaaggttt tatttgctcc tcaaagtgcc
     4741 atgtatgaaa tgtttaaaaa tcaaatcaaa tttttaaatc aaaatgatga tatttttaaa
     4801 aatgtaaagg ttttaaaaaa tctacctaca aattttgatt atgctattcc tatttgttct
     4861 ttgccttttt ttattgatat taagcttgat gagattttac gattaaaaac acctatattg
     4921 ccacagaaaa aaccgcataa tcaaagaaaa aaacttggta ttttttatgc tactcctaat
     4981 gctgaaaatt ctgatttatt aagaaatgta aaatttgaat ttttatttga tgtattaaaa
     5041 gacttagatt atgagatcat ttcttttcaa atgcaattaa aagaagaatt gcctaaggta
     5101 atagaagata gaagcaagct tataaaaaat tggaatgata ctctaaatta tttatatgat
     5161 attgactgta tgcttagtat tgatagtgct atagcgcatt taagtttagc tatggatatt
     5221 cctactatag ttcttttaca tcctaggttt gattggcgtt ggggaaaatt tgaaaatcct
     5281 aaaagttatt tttggccaaa agcaaaatgt tttatcataa aagaacaaga agaaacaaaa
     5341 agaaatttgc aaaaactgat taaagatatt ttaaactaaa gcttagttta agagctttag
     5401 gtggaaaatt tggtttttga taacatcagc tagcattttt ggcatttggt ttataatatc
     5461 ttgataattt tgctttgcat cttgattttt taatgtcaaa tttaattttg cattttttgc
     5521 tacaagaatt tttccattgc ttgtagaaat gattttaaaa ttaacattag ccacaccctc
     5581 tttactagtt atgataaaat aatttgtaat atttacataa aaatcttgca aatttaccac
     5641 cacaacataa tctgtaaatt tggcatacat tttagcctta tctttttctt gtgttaaaaa
     5701 aggacttaca tttataagtt ttgcatcctt agggctaaaa tatgacaaag ttttaggact
     5761 ttgataaata ccatttgcag cagaattaac ccaattaagc tttaaacttt gaatcaaatt
     5821 tttagcaaat aatgtagaaa attccttatc actcacccta aaaccatcta aaaaataacc
     5881 aaaatttttc ctagaagtta atacaatggc aaaatcaata tctttatctt tggtgatttg
     5941 cgattttttt tcaatcaagg tagaactatc aaacaatgct ttttgttgat ttagatttgg
     6001 atttgcaaca ttttgattta gatctattac ttcaaaacta tctgcgcttt tttcaatttt
     6061 aataactttt ttctgagaaa aattattcgc taaaagatta gaacttaaaa ctaaacttaa
     6121 aaacaaaatg aaacaatacc tcatcttcat ccttataaac tatttaaata taaaattata
     6181 ctctttattt tataaaaaat cttgtaaaaa attcctagat gaaacacaaa taaaaggact
     6241 ggatttataa tttaaagggc tatataaaat gtatttttta gaaaaatctc ccataaatcc
     6301 tccattttga ttaatcaaaa aatctcctgc tacaatatcc caaatattaa gcttttcaaa
     6361 tcttttataa actcctgccc tagcctctaa aatagcacaa aatttcaatc cagagcctat
     6421 attaatagct tctaattgat gctcttttgc aaagtcttca tcttctttgc taagatgatt
     6481 aacactcaat aaggctttat atttattttt ctcgtattct tgctggtcaa tttgcaaagg
     6541 tttatcgttt ttataaacct tggtttttgc atgagcatag aatatatcac cttttgatgg
     6601 attttgtatg agtgataaaa cagggcgatt gtcatgaacc aaacttatca taacgcaaaa
     6661 ttcatcactg ccttttaaaa aaccacttgt tccatcaaga ggatcgataa gccaaaaagt
     6721 ttttaattct tcacactctt ctttgctaag taatttttct tctgatagaa ttttaatatc
     6781 cgtagaaccc aaaatatcat ttagaatttt attagaagca agatctgctg atgtaagcgg
     6841 gcttttatct tctttttccc aagttttgaa attttttctc tcttctaaaa tagctttaga
     6901 agcttgattg ctagcattta tagcaatttc taaaaattta tcaagattaa gcatgattat
     6961 aaactttcta taagattttt taaaattata caagaagatt ttgtggaatt tttaatttcc
     7021 acaaaaattt taattatatt ttactagttt cacccaaata aagttgtctt ggacggacta
     7081 ttttaagact ttcttgctct ttttgttcta tccactgagc tatccatcct ggggtgcgcc
     7141 ctataacaaa taaagtagca aacatttcat ttggaatacc taaggctttt aaaataagtc
     7201 cactatgaaa atcaacattc ggatatagcc ctctttgaac aaaataatca tcacttaaag
     7261 caatctcttc tatacgcgtt gctactttaa taagattggt atcaataccc aactcatcaa
     7321 taagttgatc acgaagtttt ttaagtactt ttgctctagg atcaaaattt ttataaaccc
     7381 tatgcccaaa gcccatcaag cggaaaggat cgtttttatc cttagctctt ttgatgaatt
     7441 catctaccct atcaacacta cctatttgct caagcattct aataacacct tcattagctc
     7501 caccatgtgc atgaccccaa agcgcaccaa tacctgctgc tatacaggca taaggatgag
     7561 cgtgagttga acccacagca cgaactgttg aagttgaagc attttgctca tgatctgcat
     7621 gaagcataaa aactgtatca agtgctttta cttctatagg tttaagctct acatgatcgt
     7681 aaggataggt tcttaacata tataagaaat tttctgtaaa accacgatct aaatttggat
     7741 aagccatagg aaagccgtgt ttatatctat aagcagtggc cactatagta gggattttag
     7801 ctactattct agctgccatt tccatatatt cttcttttac attcatgttt aaatgatcag
     7861 gataaaaagc actaagcgat gaaacagcac cttgtaaaac tgccatagga tgagcattat
     7921 cagggaaaga atcaaaaaga cgatgcatac cttcatggat aaaagaacgc tttttcattt
     7981 cataacgaaa tgcttcaaga cgcgtagcat caggtaattc tttataaagt aaaagatgaa
     8041 ccacatctaa ataaagtttg ttttcagcaa gccactctat aggatagcca cggtgcatta
     8101 aaattccgtt ttctccatca atataagtga tttttgattt acaagtagct gtagaagtta
     8161 agccctcatc ataagaaaac attcctgttt gtttataaaa acttgacata tctacaacgc
     8221 ttggcccagt tgtaccatca tatataggaa attcatagct ttttccattt ctattatcgg
     8281 ttatagtaac ggaatttgac attttcgctc cttttattgt tacttttatt aattctaaca
     8341 aaaaagggcg attatgagtt tttttattat taaattttta agattttgtt tgcttttttg
     8401 agtaaaaaag taactttcat tttttagaat tagaaagaaa tttgatcata ctcataacaa
     8461 taatagcctc aaacaacgct gttaaaataa gtgctgaata aagcttctca tcaataacct
     8521 tgcccgaata acccaaagta gctgttgcta taagcaaggt taaaggcata gaatgactaa
     8581 gaccaaataa aatcatattt ttaaaaccaa ttctttttaa aaaaacactt gcacataaaa
     8641 ttcttaaacc caccataaca aacataagta aaaatgcttg taaaacgatt ttataatcta
     8701 aaatcatttt aagatcaaag gttgaaccta tatggataaa aaaaataggg atcaaaaacc
     8761 catgtccaaa agtagaaagc ttatgctcaa gatctttttt atgatcaaaa aaagtagcta
     8821 taaatgagcc tgctataaaa gaaccaagaa cgatttcaag ttttgtaata accatagcaa
     8881 caatgatcag tataaaaatg gccatacaaa atcttatatc tttttcattt ttatcttccc
     8941 atggcataag cacaacttta agctgaggat accaccaaaa aagcacacca agcattttaa
     9001 atccgagcaa acaaagtccc aaaaagatat taagatataa aatactttgc gctacatcaa
     9061 taatacctgt tccttcgcgc aaaaaagctc ccgctatagt caaaagcaca atagaaatca
     9121 cctcagctaa agtagccact atcatagcaa tatttagcca ataacactct tttccaaaat
     9181 ccttaaaaag caaagataaa agccctacac tcatcacagg tataatgata acaaatacta
     9241 aagaaagtcc aaaaatccat actataagag aagataaagc gtaaagtaaa aaaatataaa
     9301 aaaaactttt tttggcgact tctttatcca tattaaaaaa ggctcttaaa tttacttcca
     9361 tacctgctat aaacattaga taataaaaac ctacatttgc taaaagtgca aaattttcac
     9421 tttttcctat gaaaccaaaa tatgctatta ttgcccctaa aataatttca gtagctgaaa
     9481 gaggcaagcg taaaattttt gcaatatgcg gagaaaaaag taagcataaa gctataacaa
     9541 taagaatttt tagatcaatt aaaccttgtg gatcaatgac actctgatgc aaaagtaaat
     9601 cccatttctt ttaattttat tatatcttga cttggttctt cacctttagt ggttaaataa
     9661 tcccctataa caatagcccc agcacctgct tgaaaaattt catattgtct ttctcgtaat
     9721 accacttcac gcccacctgc taccattacc acgctttgcg gtaaagcctc tttggtatca
     9781 cgaacaattt ttaaggcttc atcagcgcta agtcttggaa cttgtagttt taaattttca
     9841 tttgctataa aaaaattaat aggcgttgaa aaaggttgta attcttgcaa agattttcta
     9901 aaacttagcc tatcttcttc actctcaccc ataccataga ttccaccaca acaaagcata
     9961 agccctgctt ctttagcgtt taaattggtt tgaaatctac tttcccaagt atgcgtggtg
    10021 caaatttgtg gaaaaaattc cttagaactt tcaagattgt gattataaga aaaaattcct
    10081 gcttttttaa gttctttgag ttgttccacg cttgccatgc cattacaggc aattaaaagc
    10141 aagttaggca cttctttttg cacggcctta gcagcttcgc aaacatactc aagcttttca
    10201 tcatcaagcc caagtcctgc tgtaaccaaa caaaaaccca aggcttcatt tttctttgcc
    10261 atttttgctt ctaaaacgat ttgtgaaagt tctttacgac gatatttttg aatatctgtt
    10321 tttacatgag cgctttgggt gcagtattta cagtcttctg aacaatttcc actcgctata
    10381 tttgaaatag cacaaagcat gatttgcatt ctaatccttc atttcttttt tgattttaca
    10441 ttttaaacat tctaagaatg tacctttttt aagctctttt atcactaaag tttcgccaca
    10501 ctcttcgcat ttttcttcac ttggtttgta tttgcttata aaattgcatt ttggataagc
    10561 actacagcca taaaatttac cacgttttga aaagcgttct acgatttcac ctttttgaca
    10621 acttggacaa gtaatgcctg taccattagc tttagctttt gcggctgtat tttcgctttc
    10681 gtttttgctt tcacttttta aatttcttga atacttgcat tttgggaaat ttaaacacgc
    10741 tacaaattct ccaaaacgcc cttttctaat agcaagctct ccgccacaat caggacaact
    10801 ttcgcctagt tttgtgacag ttttttgact agctattttt gtttttcctt cttcgatttt
    10861 tctcataaaa ggatagtaaa attcttttaa agtttcttgc caatctgcct tatcttctgc
    10921 gatttcatct agggtatttt caaggtttga agtaaattta ctatctacta tatcgctaaa
    10981 atttttctca agcacttcgg ttacattaaa agcaacatcg ctaggaatga gttgtttttt
    11041 atctattgtt acataatcac ggcttgtaag tatagaaatg gttggtgcat aagtagaagg
    11101 gcgacctatg cctaaacttt caagtttttt tacaagtcct gcttctgaat accttgaagg
    11161 tggttcggta aaatgtgagt tcatttctaa attttgcact tttaaatttt ggcctatttt
    11221 aaaatttggc aaaattttat ccttatccat atcaccataa actttataat atccatcaaa
    11281 aaggattttt ctaccgctta ttttaaaaac tactctatca ttttttacaa atacattttg
    11341 agtttgagag atagcaggac tcatctgaca ggctaaaaag cgattgtaaa taagtgtgta
    11401 aagttttaac tcatctttgt ctaaaaattt agccgcaatt tctggagtaa aacttaaatt
    11461 tgtagggcgt atagcttcat gagcttcttg agcgccttta gtctttgtag tatatacatt
    11521 tgctttgctt ggaagatagt ccttgccaaa atttgcttgt atgaattttc ttgcattttc
    11581 tactgcttct ttggctaaat ttaaactatc ggttctcata taagtaataa cccccatcac
    11641 gccttcatgg gtatttactc cttcatagag cttttgagct atcatcatgg tttttttagg
    11701 gttaaaacca aggcgattgc tggcactttg ttgtaaagtt gaagtcataa aaggaggcgg
    11761 cggagcgatt tttctttctt tgctttcaat gtcacttata ctataaactt catttttaca
    11821 agcttctagt ataagtttag cacgatcttt gttggtaatg gtaagttttt ctatcttggc
    11881 tttatcaaac tcaactagtt ctgcatctaa atctttttga aaaatcatat caatactaaa
    11941 gtattctagg ggtacaaagg cacgaatttc tttttcacga tcgactatga tctttaaagc
    12001 cgcactttga acacgcccag cactaagtcc tctttgaatt ttttgtccta ataaagggct
    12061 gagcttatac cctacaatgc gatctaaaag acgtctggtt tgctgagcat ttacagagtg
    12121 catgtttaat tttcttggat tttttaaagc attttctata gcgcttttag tgatttcatg
    12181 aaaaacaatg cgtggtaagg tgttttcatc ttttcctata gcttttgcaa tatgataggc
    12241 tatagcctct ccttctctat cttcatccgt tgcaagatag acttctttgg catctttggc
    12301 tttgctttta agttctttaa ctaaggcgct atgatcactt gtgattctat actcagggat
    12361 aaattcatca tcttctattt taatcccaaa gcttgattta ggcaaatctc taatatgtcc
    12421 tttagaagcg ataacttcat aatcttttcc caaaaaattt cctatggttt tagcttttgc
    12481 aggagattct actatgatta aatttttctt cattttgcac ccttgttaaa taaaaagctg
    12541 aatttagcta aaaatattta aaattctact tataaaatat attttaatca agctaaaata
    12601 ttttaaaaac aaaactatca taacaaaata aataaaatat aattttaagt aattttaaat
    12661 acaaaccata atttttggag tataataaaa taaaaaaggt aaaaattatg aatgacaaaa
    12721 cttataaatt tcatccaaat gacacaaaaa tggataaaaa aataattcaa attactgaaa
    12781 agtccggatt taaagcagct gtgttttcta tggctgctat gactatgcta ggaagtgtgg
    12841 tcatttcatc tgctctgcct gctatcaaca gacattttga agaactttta acccaaagtg
    12901 gcgctactct tgcttcaagt ttcacattag ctcatcttga tatacttgtt cgcttagttt
    12961 taaccatccc tgctattttt gttgtcattt tatctccatt tgctggtatt ttaatggata
    13021 aatttggcaa attaaaattc attcttccag ctatggtggt ttggactctt tctgggataa
    13081 gtggcttttt cttaaatgat atttatgcta tactgacttc aagagctatt tttggtatgg
    13141 caactgcttt tataatgaca ggcgcttcgg ctttgcttgg ggattattat agtcgtggtg
    13201 gctttaatcg cagagaaaat gctttaagtc ttcaaggatt tttttgtgca gtataggggg
    13261 tgctgttttt atttctattg cgggatttgt ttcaagttat tcttggcgtt atcctttttt
    13321 gatatatgga cttggaattt taattacctt aatggctatc atttatcttt ttgaacctag
    13381 aaaatttaaa ttctataatt atacaaaaat agaaacaaaa acaaattatt ggcaattttt
    13441 ccctatctat tttataggtt tttttatcat ggtagtttat tatatttcgc caactcaact
    13501 tccttactat atagaagaac atttgggatt ggatcctaaa tatataggta tttcgatgtc
    13561 tgtatctgca ctatgttatg gttttttctc tctaagctat agatatatta taaaattctt
    13621 aagtattaaa actatttatg ttttaactct ttttatcgta tcttgttctt ttttgctgct
    13681 ttttttagta gatagctttt tcacagtttt aatcgcctta gctttgcttg gaatgggtgg
    13741 aggtattatg cttgtaaata atacggctta tcttttttca atctgtcctg aaaatgctcg
    13801 ctctagggct tatggaattt tagcaagttg tatattttta ggacaatttt taagtcctat
    13861 tatctctcaa cctatcgtta gacaaatggg tcttgtagat gcttttttaa tatggtcaat
    13921 agtaattttt atagtgtgca ttgtgttttt atttttaaag caaaaaccta gaataaatta
    13981 gcaagaaaaa tcttgctaat tttatttatt acaaacctac cgcacttaaa gtttggtatt
    14041 tactcatata aatttgagct tcaatttttc tcatcgtatc aagtgctact tgaactacaa
    14101 taagtacaga agtgccgcca aaatgaaaag gcacacccat aaatttcacc aaaacccaag
    14161 gtaaggttgc aacaagccct aaataaatag aacctgataa agttaaacga gaagccactt
    14221 cgttaagata acttgaagtt ccttcacctg gacgaattcc agggataaaa ccgccttgtt
    14281 ttttcaaatt ttctgctatg tctttagcgt taaatacgat agaagcataa aaataagcaa
    14341 agaaaattac aaacaagaaa gttagaacat gaaacaaata accatttgga tttaaaaagt
    14401 cattaatggc ttgtagataa ggatttgtac tagtttgtaa aattgttgtt ggaaacatca
    14461 aaatcgcact agcaaaaatc ggtggaataa ccccactaag attgagttta ataggaatat
    14521 aattcataat gcgtttgttt tgattttgca ttacaacttt acgagaataa gaaataggaa
    14581 ttcttctttc tccaagttct atataaataa tcacccctat ggtgattaaa atcaaagcaa
    14641 aaattgcaaa agcggttaag aaattcatct cgcctgaatt gatttgtcct acagttcctg
    14701 aaatcgctct tggaatacct gaaacaatac ctgcaaaaat gattaaagaa ataccatttc
    14761 ctatacctct ttgtgtgatt tgttcgccaa gccacattaa aagcatagtt ccagcaagca
    14821 tagaaatagc acaaagtgcg ataaacatat ttaaatcttc caccattata gcccctgcac
    14881 caccacgacc gtgcaagctt tgcaaaccta tagcaacgcc tatactttga accaaagtaa
    14941 tcacaatagt cgcataacgg ataatttgca tatatttttg catactatca cgctcttttt
    15001 tcatcttacc aatatttgga aaagttgctg caagaagctc cataataata gaagcagtaa
    15061 tataaggcat aatacctaaa gaaatgatag aaaagcgttc agccgctcca ccactaaaaa
    15121 cattaaataa acccaaagca ttgttttgat tgttattaaa aaattccgca atcacatcag
    15181 cattgacgcc aggaactggc acataagcca gaaccctata agcaaataaa aatgctaagg
    15241 tgattaaaat cttattcgtc aatgctctat tcattatttt gatccggtga cactaatatt
    15301 ctcgtctttg atttttgata ctaagtcttt tgcacttgca ccaattaatt tgattttatt
    15361 cacagatttt gaaattttgt gaacactttt aatgctctca aatgtaattt cactaagctc
    15421 ttttacagct gtgatttttt caacattgat cacataaggt ttttgaattt tagaagtaaa
    15481 acctactttt ggtagtcttc tttgaagtgg ttgttgaccc ccttcaaaac ctcttttttc
    15541 attataacct tttctagcag tttgaccttt acccccttta gtagcagtct tacccatgcc
    15601 agaaccttga ccacggccaa ttcttttagt tttatgcgtt gaacccgctg cttttgttaa
    15661 attcatcttc ttatcctttt aacattgtta aagctttgat tgtagtacga accacattag
    15721 ctgaattatt tgaacccaaa gacttggtta agatgtcttt aatacctgca agttccacga
    15781 tagggcgtgt agaaccacct gcgataactc ctgtaccttc gctagctggt ttaagtaaaa
    15841 ttctacttgc gttgtatttc acctctacat cgtgagcgat agttgagcct ttagttttaa
    15901 cttcaacgat atttttaaac gcatcgtcaa cagctttacg gatggcatct ggaacttcct
    15961 tagccttacc ataaccaaca cctactaaac ctttgcggtt tccaacgata actaaagcag
    16021 taaatctaaa tcttctacca cctttaacaa ccttagtaac tctgccgata tcgacgatta
    16081 cttcttcaaa ttcttctcta ttatattttt ccatcgattt accccttata gcctaatgcc
    16141 attttctctt aaagattcag ccaatgctgc gataacacca tgatatacat aaccatttct
    16201 atcaaaaaca gcttgttcta tctttttaac ttttaaagtt ttagcaaatt cagcagcgat
    16261 ttttttagca ccttctttat ttgctttaac gccaagtttg cgtccatcaa ctgctgctaa
    16321 agttacagct tttacatcat caatcgcttg gatatataga gttctgtttg atttaaatac
    16381 agaaattctt ggaaaatttt cacaacctga aattttcgct ctaattcttt tttttctttt
    16441 gattcttaaa gttagttttc tttttaatac atttgctctc atattctacc cttacttctt
    16501 agatgtctta ccagctttgc ggataatgcg ttcatcagaa tacttaacgc cttttccttt
    16561 atatggctct ggcggtctaa attcacgaat ttgagcagca acttgaccta caacttgttt
    16621 atcacttcct ttaactgcaa tagtattttt atccactaca atttcaattc cttctggaat
    16681 atcataatta ataggatgag aaaaaccaag gcttagttct aaaactttac cttttaaagc
    16741 tgccttataa ccaactccat tgatttcaag agtttttgaa aaaccttgag ttaaacctac
    16801 aacgatattg taagctaaag ctctgtaagt tccccaataa gctctacttt gtctgtcttc
    16861 accttttgga gaaaaaagaa tattattatc tttaatctca acatttacat ttgctttagt
    16921 atcaagttct tttgccaaat ttcctttttt aaatttaagc aaatttcctt ctaattttac
    16981 ttctactcct gctggaatag caatcggttg tttacctata cgagacatat ttttcctttt
    17041 tatttgtcta ggatatttct acttttttaa aagaatggat acccaatgcc ataaaaagca
    17101 gattttttac caaatggtac ataaaatttc gccgccaaca cctgctttat aagcttcatc
    17161 attagctaaa acaccatgac ttgtgctaac tacgatagta ccataaccat ttttaaaacg
    17221 cttgatttca tctttacctt tataaacacg acgaccaggc ttagaaattc ttttaagctc
    17281 attgataaca ctcttacctt tttcatcgta ttttaaaact acattgataa atttcttttt
    17341 atcttcttca ataacattaa aactctcaat atagccttta gcttgaaaaa ttccaactaa
    17401 agcttctaca actttagaat gtaaaagctt ggttgtttca agctttctca ttcctgcatt
    17461 tctgatacga gtgagtgaat ctgaaataat atcatttatc atattttatc cttaccaact
    17521 tgctttctta agacctggaa tcaaaccttc attgcccatt tttcttaagc aaactctgca
    17581 aattccaaaa tctctataaa ccgaatgcgg acgcccacaa atttggcatc ttgtataagc
    17641 tctaacctta aatttaggct tgcgtgccgc ttttgcaatc attgattttt tagccatctt
    17701 actttccttt tgtaaatggc acaccgataa gttctaataa cttttgtgcc tgtttgtcat
    17761 tttgtgctgt tgtaactata gaaatgttca taccatgagt tcttaaaatt ttatcatact
    17821 ccacttctgg gaacatcaac tgctcatcaa gaccgaagtt atagtttccg cgtccatcaa
    17881 aaccatctct acttaaacct ctaaagtctt tcacccttgg caaagcaata gaaattaatt
    17941 tatcaagaaa agcatacata ttttcttttc ttaaagttac cattacacct acaggaaaac
    18001 cttcgcgaac tttaaatcct gcaactgatt ttttagcttt agtaatcaca gccttttgtc
    18061 ctgcaattaa agaaatagta tctgcaacat tttgcaatac tttttgatct ttagccaact
    18121 caccagcacc tacgctgata actacttttt cgatcacagg gataagcata ggatttttaa
    18181 tatcaaattc tttaaccaat gcaggtttaa tgctttgatt atatttttct tttaatctca
    18241 tcatcgctta ctcctgaact tttgccacat tggaaatatc cattggcatt tctttattga
    18301 taaaaccacc atttgggttt ttctcactcg gcttaatagc ttttttagcg attttacatc
    18361 cttcaactac cactttaagt gtttttggat ataccgctaa aactttacct gttttacctt
    18421 tatcatcgcc tgtgataacc ttaacgctat cacctttttt gatttttaat ttaaccgcca
    18481 ttataatacc tccggtgcta gtgaaacgat tttcataaag ccaccatatc taacttctct
    18541 gcccactggc ccaaagatac gagttccgat aggctctctt ttgttgtcaa gaataaccgc
    18601 agcattttca tcaaaacgaa tcaaagaacc attatctcta tgaatttctt ttttagttct
    18661 aacgataacc gcttttacca cttgaccttt tttaactttt ccatttggta aagctttttt
    18721 aacagatgca acgattacat cacctacggt agcgtatctt cttttgctac cccctaaaac
    18781 cttgatacac attaattctt ttgcaccgct attatcagca actgcaagtc ttgtaaaact
    18841 ttgaatcatt actcaactcc tgtagctaat acagatttta agcgaaatga ttttcttttt
    18901 gaaagtggtc tgcattctac tgcaacaaca gtatcaccca ctttaacttc atttctctca
    18961 tcatgaatta gatatttttt aaagcgttta acaatttttc tatatcttgg atgaaccact
    19021 tttctttcaa ccaaaacact tgcggttttt tcaccagcga ttttaacaac aacgccttga
    19081 atttctcttt taaatgccat tttctatcct tatcttaaag cgttaattgc tgtatttatt
    19141 ctagcaatgt ctttttttac ttggctaatc tcttttggat tagtaagttg cattgttttt
    19201 agcttttgtt ttaaagtgaa taaaagcacc tttttttctt ttagcattgt tgcaagctca
    19261 gctgctgttt tatctttaat ctcagtatat ttcattttgg ctctctcttg taacaaactt
    19321 agttttaaat ggaagtttat gcatagctaa agtcaatgct tctcttgcca tttcttcgct
    19381 tactcctgcc atttcataaa tgatacgacc tggcttgata ttcattaccc attcctcaac
    19441 agcaccttta cctttaccca tacgagtttc taaaggtttt tttgtcaaag gcttatctgg
    19501 aaaaactcta atccaagttt ttccttgtct tttaacaaaa cgagttaaag cgatacgcgc
    19561 tgcttcgatt tggcgtgagt taatgcgtcc tgcttcagtt gcttttaatg caaattcacc
    19621 aaaagtaaat tctgttccac gattagcata acctctgtta cgccctttca tcattttgcg
    19681 atatttagtt ctttttggca ttaacatgat tatttacccc ttcttgtgcg tcttggcttt
    19741 ttagctggag cactttcttc agttttttca ggttgcatac ctttgtgcaa tacttcacct
    19801 ttaaagatcc atactttaac tcctatgttt ccataagtag ttctagcttc tgcaaaacca
    19861 taatcgattt ttgctcttaa agtatgaagt ggaacgcgtc cttcaagata ccattctgtt
    19921 cttgccattt cagcaccgcc taaacgaccg gaaactgaaa ctttaattcc tttagcacct
    19981 gctttttgcg caccttggat tacttttttc attgctcttc taaaagcaat tcttttttca
    20041 agttgagttg caacactttc agcagcaagt tgagctgaag ctcctgcttt tctttcttct
    20101 ttgatattga tatttacatc tttaccgatt aaatcttgca attcttttct taaattatca
    20161 acatcactac cttttttacc gatgatgata cctggtcttg cagcaactac agtaacgcga
    20221 agttttttag cagttctttc tactaaaatt tggctaattc ctgcgtaata aagttttctt
    20281 tttaagaaag ctctgatttt gtaatcttca ccgatatttt ctactaaatt tgctttagtt
    20341 ggaaaccatc ttgattccca gtttctattg attcctagtc ttagaccaat tggattaact
    20401 ttttgtccca ttagctttcc tttttcactg ttgctttttt agtgcttgtt gtttttttag
    20461 ctggagcttt tgttgtagta gtttttttag ctactgtttt tttctcttca gatttcactt
    20521 ccgcttttgc cacttctact aaaatatgtg aagttggttt tctaatacga cttgcacttc
    20581 ctctagctct tggtctaaat ctttttaata ccgcagctgc gtcaacacga caacttttta
    20641 caatcacttc gtttgcttca aagccaccat ttgctactgc gcttgaaatt gcgtttgcaa
    20701 tgtattttgc acctttattt ggcataaatt ttaaactagc catagctaat tctgcattca
    20761 tcccctgaac ttctctagca atcaatcttg ctttagttgg agataatctt atgaatttaa
    20821 ttaatgcttt actcatatct tatcccttac ttaccaattt tcttttgcac agagccttta
    20881 tgccctttaa atgtgcgtgt tggagcaaat tcaccaagtt tataaccgat gtgattttca
    20941 gtaatataaa ccggaatgaa gcttttgcca ttatgaacat taaatgtaag tcctatcata
    21001 tcaggagtaa ttgtgcttct tcttgaccaa gttttaattg gtttattatc attagccttt
    21061 ttagcagcga tgactttttt cattacatga tcatcaacaa aaggaccttt ttttagtgat
    21121 ctagccatct tactttcctt ttcttcttga aattattagc ttatcgctag cctttttacg
    21181 acgagttttc gcacctttgg ttggtttacc ccacggagtt actggatgac ggcctgaatt
    21241 tttcttacct tcacccccac cgtgcgggtg atctactggg ttcattgcag aaccacgagt
    21301 ttgcgggcgg atacctctat ggcgatttct acctgcttta ccgatagtta cattagccca
    21361 ttcttcattt ccaacttcgc cgatacttgc catacattca gctaaaactt gtctcatttc
    21421 gccacttgca agtcttaaaa taacatattt ttcttcttta cccataagtt gtgcataagc
    21481 acccgcagaa cgaatcattt gaccgccttt acctggtttt aactcaacat tatgaacaat
    21541 agtacccaca ggaatgtttt taagtttcat tgcattacct ggtttaatat caagtccgct
    21601 ttcagcagct gcaacgatat caccaacgct taatccacgt ggttgaagaa tatatctttt
    21661 ttccccatct ttataagcaa tcaaagcaat tctacaattt ctgtatggat catactcgat
    21721 tgcttctact ttgccttcta taccgaattt acgacgttta aaatcaataa ttctgtaaag
    21781 ttttttagca cccgcttctt tatgacgact tgtaattctt ccatagctgt tacgacccgc
    21841 gtgtgctgga agtttaacaa gtagtgagcg tacacttggt ttagctgtaa tatcttcaga
    21901 acttaaacct gtgatatatc ttctacttgg agtatatggt ttataagttt taattgccat
    21961 cttaagcctc cgtattttct aagctaacac cttcaggtag cttaacatag aattttttgt
    22021 aattgtttct ttgacctaaa cgacctctaa aacgcttaat ttttccatcc attcttaagg
    22081 aattgatgct ttttggagtt acaccaaaat actcttttaa aaccgctttt aagcctgttt
    22141 tagtcatttt tggcgaagtt tgaataacta cgacaccttg ctcttgcaaa ttcaaacttt
    22201 tttctgtgta aagtatagtc tttatatcag taatatctgc cataattatc cctcttttgt
    22261 aatagattct aacactgatt tttccataat aacagcatta aatacagata ctaaataagc
    22321 atttacttca gttacatcaa ctacatagca atttgctaaa tttctgtaag ctaaaagtgt
    22381 tttttcatct agtaaatctt taacgattaa agcatctttg acgccaagtt ttttaatcac
    22441 agcgtttgca tcttttgttt taccactttc aatagccaaa gaatcagcag taaataacac
    22501 acctttagct gctttatctg ctaaagctct ttcaagcgcc aatctttttt gttttttatt
    22561 tactttttgg aagtagtttc tttcatttgt tggaccaaaa gcaaccgcac cgcctaccca
    22621 aacgttagtt cttgttgaac ccgctctagc accgccacga cctttttgtc tccaaggttt
    22681 tttaccacca ccacttacat cacttctacc tttagtatga gctgtatttg ctcttaaact
    22741 tgcaaggtaa gattttacat acaagtaaag attgtgtgga tttacttccg catattttga
    22801 aggtaaatca agttcacctg ctttttctaa tttatcattt aaaacaacta ctttactcat
    22861 tttgcaatcc ttattttacc catggcacca ttataacctg gtactgcacc tttaactact
    22921 aaaattttat tttcagcatc ataagataca acttcgtttt taatggtcac tttagtattt
    22981 ccatagtgtc ctgccatttt catacctggt tgaacacgac ctggccattc tctattacca
    23041 atagatccat ggcgtctatg aaatctcgaa ccgtgacttg ctggaccccc tgcgaagtta
    23101 tgtcttttca taacaccgct ataacctcta cctttagtgt taaagcttac ttttaaaatt
    23161 tttgcttcat ttaatggagt ttcatctaaa tctcctgctt cagtatttgc tacttctaaa
    23221 gtcgcaaatc tattgtattc tgcagaaaga ttgtattttt tttgttgtcc tgcgacacat
    23281 ttattacttg ctttaccttt tggatatgct actaaagcct ttccgccttc aacttcacat
    23341 acttttgcat ttacaactct tagtaaagtt acagcgatac ttggattagt aattgttctg
    23401 ctcattccaa ttttttctac aatatattcc atatcttatc cttacttacc catagctctt
    23461 acttcaacgc ttacttctgg cgctaaatca agcttcgtta aagaatcaac tgtatctgga
    23521 gtcgctgcta ctatatctag catacgcgcg tgaattctta tttcaaactg ctcacgagaa
    23581 tctttgttaa tgtgtggaga ttttaaaact gtatagcgtt tgattttagt aggcattggt
    23641 atcggacctc taatatccgc acctgttctt ttaacagctt ctacgattgc tgcaactgtt
    23701 ctgtctagta ctcgatggtc ataagctttt agcttaagcc taattctttc cataatattt
    23761 cctttaaaaa gaactcgtta gttaaaaact aaccaaattt ataaaaattg aaatgagagt
    23821 atataaaatc ttgttttcaa agtcaaggaa tttgatgaaa tttttctatt attttccttt
    23881 taaaaaggat aaaaatagaa tttttagaat ttaaaaatta tcattatttt ttaaattttt
    23941 gtatataatg gtcaatatct tatttcatta aattttaaaa aatctcttaa tttttcatat
    24001 tcgccatttt ctaaataacg atgttttccc gccttcaaca taccaagatc taaagcccca
    24061 aaagcaacac gcttaagatc catgacttca agatcaaaat gtccaaaaaa gcgtctaagc
    24121 tctctatttt taccttcatt tataaccact ctaagcttag tatagcctcc acttgatcca
    24181 aaaatttcaa agtctataaa aggagcaaaa ctcatagagg taattttagt ttttgcatgt
    24241 gcgccttttt tttcattttt aatctcaagt ccattttgca tggcttcgat gacttgtttg
    24301 ctcaccgtgc ctttaacttt aaggtagtat tctctttcta aatcgctatg cattaaagca
    24361 tcggcaatca caggagaatc tgtaagcaaa agtaagcctt cacttgcata atccagccta
    24421 cctacgctaa gccaagtact aaattgtctt ggcaaggtat catatatagt ttttcttcca
    24481 cgatcgtctt ttttactgac aatttcacct ttttgtttat ggtagattat cacgctaaat
    24541 tgcgttcttt tttgtactct tttaccttta acaaaaactt tatcatcaaa tttaacttca
    24601 tcgcttaaaa gggcaatttt gttgtttatt tttactaagc cttgtttgat aagttcatcg
    24661 gcttcacggc gtgaatagcg ggtgttatgg gatataaatt tattaattct catttgatct
    24721 tccttaaaaa gggcgttttt gccctttttt acattacaaa aatagttgga actatggttg
    24781 ggtatttttt aatctttcta aagatgtgtt ttcttaaaac ttggcggatt tgattttcta
    24841 aaaatcttgg atcattgagt acttcatctt taacattgat gaaaaattgt cctaaaactt
    24901 cagccatatc tttgctaaaa gcatgatcgt gtttgtcagc tactagccca tagctaaata
    24961 ctcttggttt gttgatcagt gtttttgtag ctttgtcaat ttgtgcgata ataactacta
    25021 taccactatc tgcaagtttt tggcgatcta taactacatc atcggcgatt tgtttgttga
    25081 tttgattatc tacaaaaact ttacctgttt ttacggtttt tatgcgtttg acatattttt
    25141 ggcaaagttc tacttgatcg ccatcactca taagataaat atttctttca gggataccgc
    25201 acttcatcgc tgtttctttg tgtttggtga tgtgattgta ttctccatga actggtagga
    25261 aaaatttagg cttagtaagg gttagcataa gcttttgctc ttctatacta gcgtgtccgc
    25321 ttacatgaat ttcactaaat tcttgatacg ctactttagc tcctgctttt aaaagatagt
    25381 caagcaccgc agaaacactt gcttcatttc ctggtatggc tttagctgaa ataatcactt
    25441 gatctgtagg tttgattttt ataaatttat gctcatcagt tgccattcta taaagcgcac
    25501 tcatggtttc gccttgactt cctgtagtta cgataagcac ttcattgtct ttatatttgc
    25561 ttacttcatc agcatcgatg aaaatttttc tatcaagttt gatgtagcct aattccatag
    25621 tggtataaag atttctttcc atagaacgac cgatcacaca aacttttcta ccgtatttta
    25681 aaccataagt gatagcttga taaacgcggt ggatattaga actaaaagta ctcatgatca
    25741 ccctgccttt ggtacgtgca aagatttgat caaaagttgg ccctacggag ctttcacttt
    25801 ttgtataacc ttctttgtac gaatttgtac tatcgcttaa aagacataaa accccttctt
    25861 ctccataatg tgccaaacgt cctaagtctg ttggatagcc atcgattgga gtttgatcaa
    25921 ttttaaaatc acctgtgtgg ataatcgttc ctgcttttgt tttgatcgca agcgctgaag
    25981 catcaatgat agaatgcgtg atgtggatcc actctatatc aaattcgcct atctcataaa
    26041 cacggcgttt ttctacaggg cgaaaccatt tgcgttctgc ttttaagcca tgttcttcaa
    26101 atttgtttga aatcattcct aaagccaaag gtgtagcgta gataggaaat tggaattctt
    26161 taaagaaata aggcactgca ccgatatgat cttcgtgtgc atgagtgatc actataccac
    26221 gaattttatc tttaattttt cttacatagt caaaatcagg gatgataata tctaccccat
    26281 gcatagttcc atcaggaaaa ctcataccta tatctactat aattgcatct ttattggttt
    26341 caaaaacact gatatttcca ccaatttctc ctaaacctcc taaaggagtg atgcggattt
    26401 tatgctcgct agaattatta tattttaaag ggtgtaagcg gttttcatgt gaaatacggt
    26461 tagcttctat gcattctgca agagcgattt gccaatcttc attacctgtg agttttgaag
    26521 gaagattgcg atttttcttc ttttttttct cagttttatt ttctgagttt tcagaatttt
    26581 ccttgttgga attttgatca atttttggag tatcattttc attttgcaaa gaatcagcta
    26641 atttttttct acgattttta tatttatagc gtttattgtt ttttgaattt gagttcggat
    26701 tttgttcgtt tttatttatc tctttgtttt cgtccatatt catcctttaa tttgtcataa
    26761 attttaaggt ataaatcaac gcaaatttca tgtggtctga tgttttcttt taagccaaga
    26821 gtgcttaaaa cttctaaaac ttttgcttta tatgttttta aatttcctaa gagttgtttt
    26881 ctaggagctt taaaacaatc ttttagaaaa tttttgaaat tttctatttc gcaaagttca
    26941 tcaaaatcct tagttttaat caaactcatc accgctgaca taacttttgg tggaggatta
    27001 aaacattgtg gatcaacatc aaaaagtatt tttctttcgc aaatcattgc acttaaaaca
    27061 cctaaggaag aaaactcact atttccttct ttagcgcaga atttttcagc catttccctt
    27121 tgtgccatta caataagccc tagacaattt ttatcttcta aagcttttaa tataatgtga
    27181 cttgcaacat aataaggcaa atttgcaacc aaaaaatatg gtttttcatc aagactagga
    27241 ttaaaagctt cgcttgcgtc ttgatggatc aagttaaatt ttccacattc aagttctttt
    27301 tgaaatttct tttttaaaat aggtatgaga tcattatcga tttcataagc ttttacttga
    27361 gaaattttta aaagttcttg cgttaaatca cctaagccag gcccaatctc aatgatattg
    27421 ttcatctctt tgggtatggc ttggatgatt tttgctaata cgcttttatc gattaaaaaa
    27481 ttttgtccgt attgtttttt tgctttaacc ataagaaata attttatcta aaaattctta
    27541 attaagtctt tttaggtaga attatttttt gtaaaaattt cataaggatc aaaatgatta
    27601 tttgtgcggg tggaaatgaa aatttttctt ttgcaaaagc tataggcata ggtttggttg
    27661 aatcagcttt tcatttgagt caactttgct tcaaagaaaa accatcaaaa cttatattta
    27721 taggaacttg tgggctttat gataagggag agattttaga aatttataga agttcgcacg
    27781 cttttaatgt agaattttct aaaatttcac atgcatttta tactcctgca aaatatgaaa
    27841 tttgcttaga aaaagaaaat gtttctcgtg aaacaataaa aatcaattct tcaaattata
    27901 tttgtcaaaa ttcaaaagcg gcaaaagaat tttcaaaatt aggttttttt gcagaaaata
    27961 tggaagcctt ttctgttttg agcgtagcta aaaatttaaa tattgatgca gagtgtattt
    28021 tgtgtgcaac aaatttttgt aatgaaaacg ctcacgaaga ttttataaaa aatcatcaaa
    28081 aggcaaaaga aaacttagaa gaatacttaa aaaaatatca ttatatttaa aaattcaaaa
    28141 aggaaaataa ttttgaaaga gcttgttaat attttagatt ttttacctga agaattagga
    28201 gaaaaaatca aaccgatgtt tcgcgtgaaa caaatttatc aatggattta tcaaaaatat
    28261 gccaataatt tttccgatat gtcaagtttg ccaaaagatt tgcgtttaga acttgcgcaa
    28321 aattttcatt tttctcctgt aaaatgcgtt aaaaatgagc aaagtaaaga tggaagtata
    28381 aaatatcttt ttgaacttat cgatggttta agggtagaaa gtgtgctttt gcctatgaaa
    28441 gaagaaaaaa tagacgcaga aggcaaaaga atttctcatg cgagatatac tatctgtgtt
    28501 tcttctcaag taggttgtaa aagtggatgt agtttttgtc ttactgccaa gggtggtttg
    28561 aaaagaaatt taagtgcagg tgagatagtc ggacaaattt tatggatcaa aaaacaaaac
    28621 aatatccctt atgaacgccg tgtaaatata gtatatatgg gtatgggcga gcctttggat
    28681 aatcttaaaa atgtttctaa agcggtaaaa attttagcgc aaaatgaggg acttgctata
    28741 agtcctcgcc gtcaaaccat cagtactagc ggtttggcaa aacaaatcaa agaattaggt
    28801 caaatgaatt taggtgtttt acttgctata tcattgcatg cggttaatga tgagcttcga
    28861 accgaactta tgcctatcaa taaagcttat aatatcgctg cgattatgga tgcggtgcgt
    28921 gaatttccta tagatcaaag aaaaagagtg atgtttgaat atcttttaat tgatggtatc
    28981 aatgataagc ttgaacacgc taaagaatta gtcaagcttt taaatggcat taaagccaaa
    29041 gtgaatttaa tactctttaa tccacatgaa ggaagtttat ataaacgccc tagtttagaa
    29101 aatgcgatta aattccaaga tttactaagt aataaaggtg taacttgtac tataagagaa
    29161 agtaaaggac ttgatatctc agctgcttgt ggacagctta aagaaagggc aaaagaacaa
    29221 tgacgatgtt agatattttc gaaatcattt ttataacaac tgttgtaatt ataggttttg
    29281 gtggaattgt ttttgtagta acaaaagaaa aaaaataatt attacattta atggtgtcaa
    29341 gggggagact tgaactcccg acctccggct tatgagacca gcgctctaac cagctgagct
    29401 accctgacta aaaataaaaa tataattata ctacttttta ctaaaaattt tctgattttt
    29461 aaaaaaaata attttatttt caatatttaa aaaatttctt tatttttaaa gcttttatag
    29521 atataatgaa cgctttattt catagacagg tgtccgagcg gttgaaggag cacgcctgga
    29581 acgcgtgtaa agtgcaagct ttcgagggtt cgaatccctt cctgtctgcc atcaaataaa
    29641 ctttaaggca aactaagtta taatacaaac ttcatttggg gcattagctc agctgggaga
    29701 gcacaacgct ggcagcgttg gggtcagcgg ttcgaacccg ctatgctcca ccatatggtt
    29761 ccgtagctca gctggtagag cactaccttg acatggtagt ggccgttggt tcaagtccaa
    29821 tcggagccac catcaccctt ccttatacaa aggattatca tgcaaaacac tatcatacaa
    29881 aaagccgtca ataaagattt aaattctata cttgaaatca caaaagatgc tttaaatgct
    29941 atgaaaacta tgaattttca ccaatgggat gagaattatc caaatgaaat agtttttcaa
    30001 gaagatatac aagcacaaga actttatgtg tttaaagaaa atgatgaaat tttaggcttt
    30061 atctgtatca atgaaaaatt taaacctgaa ttttacaaac aagttatttt taacaaaaat
    30121 tatgatgata aagcctttta tctacaccgt ttagctgtca aacaaaatgc aaaaggcaaa
    30181 ggcgtggcac aaaaactttt aaatttttgc gaaaattttg ccttggaaaa tcacaaggca
    30241 agtttaagag cagatactca tagtaaaaat tttcctatga attcgctttt taaaaagctt
    30301 gattttaatt tttgtggaaa ctttgacata cctaattacc aagatccttt tttagcttat
    30361 gaaaaaattc taaaccaaaa agctttttga gtttttttca taggctttga tttgtgcttc
    30421 atgttttaaa gttaaagcta tattatcaag cccttccaaa agacaaattc tgtgaaaatc
    30481 atctaaatca aaagaaaaaa tcttatcttt aaaaaatact cttttttcca acaaagaaat
    30541 ttctatattt ttatcttggg atttttttaa ctcatcaact atttccaaaa cctcatcttt
    30601 agcaagttct atagtgagca aaccgtttcc taaggcattg tttttaaaaa tatccgcaaa
    30661 agaaggtgcg ataatagctc taataccata atcaaccaaa gcccaaggcg catgctctct
    30721 tgaagagcca ctaccaaaat tttcaaaact caccaaaata gagctatttt gatattcttt
    30781 tttattgaga ttaaaatcca tatttaaaac actttcttta tcatctaaat aacgcaaatc
    30841 atggaacaaa tgcttgccaa aaccttgctt agacactgca agtaaaaatt gcttaggtat
    30901 aatttgatct gtgtctatat tggcatattc taaaggacaa gctatacctt tgtgtataat
    30961 aaatttttgc atattaaact cctaaatact ttctattatc acaaataaca ccttctatgg
    31021 cacaagctgc tgcacttgca ggactcatca aatgagtgat agaaccttta ccttgtctgc
    31081 ctacaaagtt acgatttgaa gttgaagcaa ctctttgacc tgaatttgct ttgtcatcat
    31141 tcataccaag acacatagaa caccctgcat atctccactc acaccctgcc tcgataaaaa
    31201 tcttatcaag tcctaaattt tcagcttctt ttcttacttg cattgaacca ggcacgatta
    31261 aagctttaac atttttatga attttgagcc cttttaagat atcagcagct attttaagat
    31321 cttctaaacg cccatttgtg caagatccta taaatacaat gtcgattttt accccttcta
    31381 taacttgatc ttgctctaaa tttacataat ataaagcatc aagcaaagat ttttgctcgc
    31441 tttgattttt aaaatcactt atttttggaa ttttttcatc tatgccaatc acttgcgaag
    31501 gatttgttcc atagctaatt tgtggtttta tcttgcttac atctagagta atactcgcat
    31561 catattttgc tccttcatca cttcttaaac tcttccaata ctcacaatac ttttgaaatt
    31621 cttctccttt aggtgcaaat tcctttccct taatatactc aaaagtgatc tcatcaggag
    31681 ctatcatacc tactttcgct ccaaattcta tagccatatt acaaagagtc attctagctt
    31741 ccatgcttag atttcttata agttctccgc aaaattctat agcatagcct gtgccttttg
    31801 ctgtgccgta ttgtgcgatc aaatacaaaa tcaaatcctt agtataaacg cctttttgaa
    31861 actgcccttt acattcgatt ttcatagttt taagtttggc ttgttttaaa gtttgcgttg
    31921 ccatgacatg ctctacttca ctcgtgccta taccaaaggc taaagctcca aaagccccat
    31981 gtgttgccgt atgagaatcc ccgcaaacta aagtaacccc aggtaaagta aagccaagct
    32041 caggacctac tatatgaact atgccttgat ttttatctcc aagtcctaaa agccttactc
    32101 caaattcctt agtattttgc atcaaagttg taatttgctc ttttgccata tcagaacaag
    32161 catttaaatc catactttta gttgaaacat catgatctat agtagccaaa gttaaatccg
    32221 ctcttgccat tctacgctta gccattttaa gccctgaaaa tgcttgaggg cttgttactt
    32281 catggattaa atgtctatcg atataaagta taggaagttc gtttttgcct tcataaacca
    32341 catgagcatc aaagactttt tcatataaag ttttagccat tgtcattctc ctttaaaatt
    32401 tctaaaatac aatcccccat ttcatcggta tttaaatacg acttagcatt taaatcctta
    32461 gtcatttttc cttgtgccaa tgccaaagat atagcatttt ctatatcctg tgcggcttgt
    32521 tcttctttga aactatactt taacatcaaa gccgcactta aaatttgagc tatgggattg
    32581 gctatattta aatgagctat atcaggcgca cttccacctg ctggctcata aagtccaaaa
    32641 cctttatcat tcaaacttgc tgaacttaac aaacccaaag atccattaat ggcagctaac
    32701 tcatcactca aaatatcacc aaaaagattt gaacaaagca taacatcaaa aatgctagga
    32761 ttttttacaa tctgcatcgc agcattatcc acatacatgt actctaagtt tatatcttga
    32821 taatcttttg caacatttgc caccacttct cgccacaaaa tagaacttgc taaaacattc
    32881 gccttgtcga ttaaatggac ttttttcttt cttattcttg cactttcaaa agcgatacga
    32941 gctatccttt ctatctcttt tttagtgtaa atttcagtat catacgcact ttctttacct
    33001 aaatcctgct taccaaaata aatcccacct gtaagctctc taacacataa aatatccact
    33061 cctttttgga taatctcatt ttttaaaggt gaagcatggg ttaaactttc ataaatttta
    33121 caaggacgca aatttgcaaa caaattaaaa tgctttctta aaggcaaaag cgaggctctt
    33181 tcaggtcttt gatctatggg caaattatcc catttaggcc cacccacaga accaaataaa
    33241 atcgcatcac tttgctcaca aagctttaaa gtttcatcac ttaaagccac tccataagca
    33301 tctatacttg caccgcctat tttagcttca ttaaattcaa aactaaaatt gtatttttgt
    33361 gcgataaaag ttaaaatttt taaagcctct ttcatcacca aaggccctat gccatctcct
    33421 gctaaaacag ctactttata agttttcatg ccattttcct ttcttctact tttaaagagc
    33481 gataaatcgc attgtaagca ctcacaaaag cttgtgctga agcttctatc acatctgttg
    33541 aaagtccttt tccatggaat tttctccctt taaattccaa atctacatcc acttgccctt
    33601 gagcatctac tcctgaactt tttgcattga tactataagc ttttagcgca ggctttaaat
    33661 tcgttatcct agcaatgcag ttaaaaactg cttcaacagg accatttcct gtgcaagctt
    33721 cagtttttag ctcttctttg atacgcatac aaacacaagc agttgggata tttccactga
    33781 tcacacttaa tttttcaagc acaaattcat tttcttcttc actctcataa cttaaaaaca
    33841 tcaaagcttc taaatcataa tcatatactt gacccttttt atccgcaagg cgtaaaaaac
    33901 gctcataaac atcatctaaa ttataagtat tttcatcata gcctaaattt tcaaggcaag
    33961 tttttatcat agcccttcca cttcttgctg tcattaacat acgattttca tgaattccta
    34021 tggcactagg gcttatgatc tcgtaagttt gcctattttt aagcactcca tcttgatgaa
    34081 tgcctgaact atgagaaaac gcattgctac ccactatagc tttatgtgaa ggtatgcttt
    34141 cattagtgat agctgaaacc aattttgaag ttttaaagat attttcacat ttaatatcag
    34201 tataaaaacc ttttaaataa tcttttctag tttttatcgc cataaccact tcttctaaag
    34261 cacaattgcc cgccctttcg ccaagtccat ttatagtgca ctctatctgt cttgcacctt
    34321 gtaaaatagc acttaaacta ttgcccgttg ccatacctaa gtcattgtga caatgcacag
    34381 aaataatagc tttgtctata tttggcactt tgttaaataa aattttgatg atattagcaa
    34441 attcacttgg taaggtatag cctacggtat ctgggatatt tatagtttta gcgcctgctt
    34501 ttatcgcatt ttccaccata aaacaaagat tatctatcgg agttcttcct gcatcttcgc
    34561 atgagaattc tacatcatca gtataagatc ttgctcttat aatcgctctt tttgccatag
    34621 acaaaatttc atcaaaatct ttttttaatt tatcttgcat atgcaaagtc gaagtggcta
    34681 taaaagtatg aattctaaaa tgctttgcca cttttaaagc ttcataagcc atatctatat
    34741 ctttatccaa tgctctagaa agtgcacaaa tagttgagtt tttaacctta gaagcgatct
    34801 tttgcaccgc tttaaaatcc ccttgtgaag ataccggaaa acctgcttct ataacatcta
    34861 cgcctaaatt ttcaagcgct aaagcgattt gtaatttttg attgatactc aaagaactgc
    34921 ctaaagcttg ttctccatca cgcaaagtgg tatcaaagat tatgatttta ttatctttca
    34981 tgatttaatc ctttaaaacc aaacagactg aatgaattaa aaattcaaaa acttaacaac
    35041 aatgataaaa aattaaaaat gtaaaaaatg attaaaaata aaattgagtt ttagagtgag
    35101 agttgcagta gcagattaaa agtattgtct ttactttttt gttgaactga atttgaaatt
    35161 tcaaaaattt gtttcatctt ttcctccttt gttaaaatta atacttaatg tatcatattt
    35221 ttagtaaatg tgtttgtaaa attcttaaat taagaaaatt attgatataa ttgtaatttt
    35281 aagtaacaaa aaggaagttg atgttaaaag aactcttaga gattaaaaaa gaaatggaac
    35341 ctgttatcca cgaagccaat gtgaaattaa atgtcctagc tcgtgaagtc atagtccgaa
    35401 aaaaagaata cgaaatttat gggcctatgg tagatcgtgt ttatcttgat aatgccattt
    35461 atgttaaagt tatgtcaagt ggacgcgatg taaaaacaga caatgtgact ataaaaaatg
    35521 gtttttatat ggtttttgtt gcccctgaaa aagaaagtac aaaagatatc aaaaataaac
    35581 tcaaagtagc ttatgaagga cttgataaca aatttatcgc tacacttata cgatcttgcc
    35641 aacgctttaa agagatcata aacaaaaccc aagctacact tgctaaagct tctaaaatga
    35701 atgtggtagt aaaaacgaat ttaggtgaag caagtgctgc tctaaaattt aacatcacta
    35761 tagaatatac taaagagaat caaaaactca ctcgtgaaaa ttcaaaatca gcaggaagtt
    35821 tcagagatac taaaacttat atcaatcttg tagtagaaaa aaatacagat tctcaaattt
    35881 gtgaaaaact acttgatgat gttgaaaaat actttatcgg tggaggttga aatcctaccg
    35941 ataaaatact tcattaaaat ttataagtat agcccaagta taagccgtaa tttgtttgtc
    36001 ttggatcgta taaatttgat cctatagctt tttgataaaa atctcttgta ttatattcga
    36061 ttttctctac tttaaaacct gcttcgattt cattagaagc acctagctca aatatagcac
    36121 cgattttaac tccatacaca aaaccatcaa atttttgaga taaagacaat aaggatgttt
    36181 ttaaatcaag atttgttttt gcataaccca aatatccacc tgcaacagct cttactcttt
    36241 caaaaatttt tggagtaaaa tcataaccca tcaagaattt atgcgtacta aaatcacttt
    36301 caattttaag tttaggagtt cttataatat cgctaaattc atcagaataa ttataagcaa
    36361 gatataatct atgcaaatca ttaaaacgat aacccgcttt taaacccaaa ataggaatac
    36421 tgctagacaa atcgccatta aaaacagcac cggtttgatt gtgttttaaa tttccttgaa
    36481 ctttagtttg aacataagct gcatccgcac ctataaaaaa gcctgatttt tcttcagcaa
    36541 aagccgagct tgaaaacaat gctatacctg caataatgct taaaaacttt ttattcatgg
    36601 tttgcctcct tgaatagaat tttgaggtga tattgtatta tattgataat tagtatagta
    36661 ttatttttat tactttttca ttttttctaa tattatgtaa ggattttgtt tacaaattta
    36721 aaaaaaaatc agctttaaaa tacttgtaaa tttatatttg ttaaaaaact atgcaattag
    36781 gaatctaaaa aagagcgaaa acacagagtg gatttcactc tttgtaaaaa gttcaaatca
    36841 aaatcaatta tcaaattctt ggcctaaaaa attaccattg cgatcaaaat aaagctccat
    36901 ataattgtta agcttgattt cataaccata cgcttcccaa tccatatcta cgataaaagc
    36961 acctggatag agattttgaa tttgactggt aatatttttg gcaagccatt aaaatgatct
    37021 tgtggtggca cagcatattg cggatataca ggatacgaag tagcaggcgc aggcgcaact
    37081 gcagaggttt gggctgaaac attagaaatt gtatttgcac ttgcaagtat ggcagaacat
    37141 gctaaaatga cagggataaa ttttactttc atttcttctt ccttaaaatg ttttagtaag
    37201 tgcaagttta tgcttttttt gtgaagtgag cgtgaaagag aaataaaaat attttaaaaa
    37261 tagctataaa tttaagatat caaataaatt tttaaacttt tgcactttca aaagctattt
    37321 aaaactttaa aatgcaaaag ctttgtcttt attttggtac taccatatcg ctacgacatt
    37381 ctatgactgt gtgtacattt ccgcgcggat taaaatcccc tactacttta atccattttg
    37441 gcttgagttt gtcttttaga gtattataaa tttcattgat acttgcttca tgtgaaacat
    37501 ttctatacat aaaagtattg atataaagtt ttatcgcttt aagctcaacc acaaatttat
    37561 caggcatata ctcaagataa atcgttgcaa aatcaggata acctgaacgc ggacaacaac
    37621 acataaattc aggcaaggtg attttaatga tatagtcatt tttagcatca tttggccaaa
    37681 tttccatatt ttctacatca aattctttaa tttctttttc accataacgc atgagctttc
    37741 cttattgaaa atttttagaa aattatataa aaaattactt ttagagcaat tgaaaaataa
    37801 acatttttag caaattgcat aaaaaagaca aatattatat taaataaagc tttttatact
    37861 agaataaggc aaatctttca aaaggaaaaa aatgaaaaaa tcaattgcaa ttataggcgg
    37921 tagcatcgca ggacttagcg cggctttatt tttcgcttca gctaaaaatg aagaacttga
    37981 ctttgatatc actgtttttg atgagggtaa agcagattta aaagcagcag caatttacaa
    38041 tgttcctttt ttcccaaaag gtgcaaaagc agatgaaatt tacactcaca taaaagcaca
    38101 aattgcttct atgctcgaag taaaatacat cgattcaaaa gtagtaagca taagcggaga
    38161 aaaaggagat tttactgtta atgatgagca aggcttgggt ataaaagcag attatatcat
    38221 cgtagcaaca ggggcaaaca aaagcgatat caaagaactt gaagattttg taataccgca
    38281 tgagcttatg ccaaaaccaa acaaattttg cttcaaacat cacgggagac agattatcaa
    38341 agaaggaatt tacgcagcag gacttgcttc aggtgttacg actatggtag cttgcgcgat
    38401 gggaagtgcc aatgaagcag cttgcgcgat tttaagcgat atcaaaggtg cagtaagcgt
    38461 atatcacgat acacctacta caagagttta aatcatcaaa gcacaaaagg tgtgctttga
    38521 tacacatcat aattgagcca atttgcaaaa atggtatttg catttgaacg ccaattgtat
    38581 tttatattgc cctttttatc ataataattt ttagcttttt gtatgaaatt atctcttaca
    38641 tattcttgat gtaaagtctc tttaaaatat tccaaatgcc ctaaaataaa aatattcttt
    38701 tcatctctta ataaagccga accgattttt ttatttctaa gcaaaatttt taatttccct
    38761 tgtttttgta gtgctaaaat ttgctcttca tccatgctag aatgtcttga atgaggcatt
    38821 aaaacctttt catctaaatt tgttaaaagc agatcaggcg aaactttatc atgcttatag
    38881 actccaaaaa ttttcttatc taaagagatt ttatccacac cataaaagta ttttaaagca
    38941 gccatggcac cccaacaaat atacatagaa cttgttacat tttgctttaa aaaatcaaaa
    39001 atttctagca attcttccca gtaagcaacc ttttcaaaat ccatttgttc cacaggagct
    39061 cccgtaacga tagcaccgtc aaatttatgt tttttaacct cttcaagacc cttgtaaaat
    39121 ttttccaaat gagtaaaagg agtattttta cccacatagc tagtcgtggc taaaagtgtg
    39181 atatttactt gcaaaggaga atttgcaagt aagcttagaa tttgattttc tgtttcaatt
    39241 ttttttggca taagattgac aatcaaaatt tcttgcggcc tgatatcttg atgctttgct
    39301 ctccttaatc ccatgataaa agcatgctct tttaaaagct cataagcggg tatattttct
    39361 ggaataatca gtggcatttt ttctccttta tttaataaac cttatttatg ataaagcatg
    39421 gtggaatttt tatctcattc actcaatgca aacacacttt taactttcta tagcttgttt
    39481 taaatccgct atcaaatcat cgctattttc aagtcctatg cttaagcgta tagtagcttt
    39541 cgtaatgcct gctttttgga gttcttcttc gcttagttgc gaatgagtag tagaagcagg
    39601 atggatgatc aaagacttgc tatcacccaa atttgcagca agtaagaaaa gttgagtttt
    39661 atcacaaatt cttctagcat gctcataatc tttagcttca aagcttaaaa gcccgctagc
    39721 aaaattttta tcaaaatatt ttttaaataa attatgataa gcattacttg ctaaagtagg
    39781 ataatttacg cccttgatat caggatgaga atttaaaaaa ttcgcaactt tttcagcatt
    39841 ttgactgtgt ttttctatac gcactgccaa ggtttcaagt ccttgtaaaa gtaaccaagc
    39901 attttgaggt gctaagctag ctcctagatc tctaagccaa gtgatgatga ctctaatact
    39961 aaaaatcggc aaatcaagtg tatttaaatt cagtccatga taacttggat caggagtgtt
    40021 aaaagcttta tatctatcgt tatttttaag caagtcgttt aaatcttttc tttctataag
    40081 tgctccaccc aaagcagtgc cttgaccgct tacatattta cttaaactat gcacgattac
    40141 atccacgcca tgtttaaaag gttggagtaa gaaaggagta gcaacggtat tatcacaaat
    40201 gctaacgatt ttatgttttt ttgctatttg gtttattttt tctatatcag ctatggcaat
    40261 ttgaggattt gaaagacttt cgaaaaaaat cgcttttgtg ttttgatcta taactttttc
    40321 caagctatct aaatcatcga tatcaaattc cctagcttct atgccaaaat ttttaagtgt
    40381 gtgagaaatt aaagtttgag tcccaccata aattttgttc gaatacgcga cattatctcc
    40441 cgaacttgct aaattgataa gagcataaaa acaagctgcc ataccgctag caacaggaat
    40501 tccaaaagcc cctccttcga cattagcaag tctttgtcct aaaacatcgc ttgtaggatt
    40561 gctaagtctt gagtaaatat tgccaagttc ttgaagatta aaccttgctg cagcttgatc
    40621 caaattttca aaattatacg cagtgttttg atatataggc acactaatac ttctttgagt
    40681 atcaaaatta taagctccgt gtaatgctaa agtttcttta ttgaaattca ttttttatcc
    40741 ttattgtatc aatgaaaaaa tgttaaaaag ctttttatcg gctttaaact aggctatttg
    40801 aaaatgtaaa tttatagaat atgagtatat acgagtagat taagcgtgcc aagcacgcat
    40861 acagaaagaa gaaagcatta agttaaaact aatataagac attttttctc ctttctaaaa
//
LOCUS       DAPIVO010000008        37150 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.008, whole genome shotgun sequence.
ACCESSION   DAPIVO010000008 DAPIVO010000000
VERSION     DAPIVO010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 37150)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37150)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37150
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.008"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            37..1529
                     /locus_tag="RJ239_000412"
                     /pseudo
     CDS             37..1529
                     /locus_tag="RJ239_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004275251.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
     gene            1728..3281
                     /locus_tag="RJ239_000413"
     CDS             1728..3281
                     /locus_tag="RJ239_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HDV7330556.1"
                     /translation="MSKNVKNLDTSFFGHPKPLLSLSLTELWERFSFYGIRPLLYLFM
                     IASFEKSGMNLKPEEASAIMGIFASCLYLAALPGGWLADNYLGQKRAILLGALTIAFG
                     HLCIAFSYFNNKMIFVGMVFLVIGTGLFKTCASVMVGMLYKKNDARRDSGFTLFYMCF
                     NFGAFVAPLICGFLQKEYGWHFGFGAGGIGMLLAVIIFYLKTMPDLKEFDEKVGIDST
                     WDRPSKKSKNAFYIIIVSGIVLLGAIFLILGGFIKLDAQVINKNIILTILACAGIYFL
                     YLFAFTSLKIEEKRNLIIFIVLFLAAALFWSVYEQQYTSFNFFAEKLTDKTILNYEIP
                     TIWFQSLGGLFVILFAPFSAFIWTICAKNNKEISSIIKFALGLLGAALAFLIMALASN
                     HAISLNGDANTLRENLENSSQIILVSPWCLVSSFLLMVLGELCLSPVGLSIMTKIAPN
                     LIKSQVMGLWFVASALGNALAGFIGGKASEENIAYLPNLFYQCMWILLGAVIILLILK
                     KPINKILKN"
     gene            3297..5087
                     /locus_tag="RJ239_000414"
     CDS             3297..5087
                     /locus_tag="RJ239_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HDV7330557.1"
                     /translation="MSIYKQRVLELRRLMKENNIDAYLILSADPHLSEYLPEYYKNRV
                     FISGFKGSVGTVLITQEEGFLWVDGRYWLQAQKELEGSGILLQKQDAKNTFTKWLEKN
                     LSEDQILGIDFALLPLSLQKDLKINCKANLKHIDLISPLWKDRPTLPQEKIYEHELEY
                     CSYSRKEKLALVRQKMKNLNVTSHLISSLDDIAWLTNLRGNDVNYNPVFLSHLLILED
                     KALLFVDQKKVNSELEKKLNLDGFWLKNYDEIIMELEKLANTNLLIEPSKMTALLINS
                     LDKSVKIIQEINPSTHLKAAKNTKEIAHIQDAMIEDGVALCKFFAWLEEAIKNKELIS
                     ELDIDVKASEFRAQSKYYISDSFATIAGFNENAAYPHYKATKESFAYLKKDGLLLIDS
                     GGQYKNGTTDITRVVPIGKANAEQIHDYTLVLKAHIAISSAIFPKDITMPLLDAITRA
                     PLWKEQIDYIHGTGHGVGYFLNVHEGPQVLSYLSPVLEKTKAKEGMLTSIEPGIYKVG
                     KWGIRLENLVIHTKVENPKNKDFGEFLYFKPVTLCPFEISCIDTKMLDEKEKEWLNNY
                     HKEVFEKLSPKLGDYPKALVWLEKRTKAIF"
     gene            complement(5208..7013)
                     /gene="mrdA"
                     /locus_tag="RJ239_000415"
     CDS             complement(5208..7013)
                     /gene="mrdA"
                     /locus_tag="RJ239_000415"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDV7330558.1"
                     /translation="MRMRLVVGFILLFFIFLLSRVYYLSIKSNVYYEELAKQNAIKTE
                     FLPPVRGQITDRNGTLLAINDLGFSISIKPYLSIKKSNKGILDKELSELTNLFPDLNA
                     SKLAEIYKRNDSYYNQDFIKVVDFIPYDEIISHYSELNLNKTIKIDPVVKRKYPFGKL
                     ASHIIGYVGKANLQDVQENEIAKLSNYTGKSGIERYYNDILQGEKGTRVYKVNALNQE
                     VEQLSYTPAMSNDIELTIDIELQSYLTSLFEGNAGAAIIMNVNDGSILAAGSFPEYDL
                     NPFVTGISFKDWDELSNSLDHPFTNKLINGYYPPGSVVKMGVGLSFLNSKNISPSTHY
                     VCNGSIELGGRFFRCWNRSGHGPVDLKHAIKYSCDVYFYNGSLQVGIDQISETLSRIG
                     FGVKTGVDLPSEFVGTLPSKEWKMQRYRQSWFQGDTLNTAIGQGNFLATPMQIARYTA
                     QIAKSGEVIPHFLKSIENNNTTIENQMDENKKEIFTLFEKSQLPYIRDAMYAVANEQG
                     GTSYRYLHNLDVKVAAKTGTAQVVGFSQTDKNRVDEKQFEYYTRSHAWLTSYAPYSKP
                     KYVVTVLLEHGGRNITSGATVAKIYQKMIELGYFK"
     gene            complement(7014..7508)
                     /locus_tag="RJ239_000416"
     CDS             complement(7014..7508)
                     /locus_tag="RJ239_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330559.1"
                     /translation="MRRNLSAYKAKFNGAYVFLGFFFLIYQILGSTFAYAPLLYGIFF
                     CYMFCLLEERERTFSKLDFRWYFSLFFLFFTDITYNFFIFSSWLAFFIFYYLCADWIK
                     TNLKIGKFIPVVFVLCAYGIILFLDMILSYIGDEKIKILGWAYIVSVFIECCLAHVFF
                     KGKI"
     gene            complement(7505..8101)
                     /locus_tag="RJ239_000417"
     CDS             complement(7505..8101)
                     /locus_tag="RJ239_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HDV7330560.1"
                     /translation="MIISAKFITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCK
                     QKNLAKSSATPGKTQLINFFEVICRRNEEKFNINFIDLPGFGYAKVSKNLKEIWNQNL
                     DEFLKLRTSIKLFIHLIDSRHTHLEIDVNLNDYLKRFLRPDQKILKVFTKCDKLNQSE
                     KAKLKNEFKGSILVSNLNKFGLDSLEDIIINQTLGLGK"
     gene            complement(8098..8559)
                     /locus_tag="RJ239_000418"
     CDS             complement(8098..8559)
                     /locus_tag="RJ239_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptA/OstA family protein"
                     /protein_id="HDV7330561.1"
                     /translation="MVARQIILLLVCVSVTWATQIEVKALNFYSDENKGESILSGNVE
                     VIRGDDILNSEKLIIYTDKNRKPIRYEAMQNARFKIVLKGKTYKGSGDKFIYNVIKDT
                     YEINGHAYINELGSNQKLFGDKIIVDRKANIYRVESKDQKPARFVFDLKDK"
     gene            complement(8541..9056)
                     /locus_tag="RJ239_000419"
     CDS             complement(8541..9056)
                     /locus_tag="RJ239_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330562.1"
                     /translation="MAIKIFGILIALFTITFTILSLQDPYSLNLQTNALNFKNIEAKN
                     LKAYESNTSIIKAYYKANSWVRYADRDEFNDFITLNLDFNLSANRLEFFNKDMSKVLF
                     EGNVTYIGSNNVKIISQEVEYQPKDKILHTNTNFKALINGSIINGNTLNYDVKNKILN
                     IQGVNAWLQDK"
     gene            complement(9047..9535)
                     /locus_tag="RJ239_000420"
     CDS             complement(9047..9535)
                     /locus_tag="RJ239_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HDV7330563.1"
                     /translation="MTELIFLDVDGCLTDGKIIYTSNGEFIKEFNVKDGAAIEAWLKL
                     GKKIAIITGRNCPCVEKRAKDLKIKILYQGIKDKLACAKEILQKLNLDFSQCAAIGDY
                     FNDKALLESVGLSFKPKDGHKDLNVDIVLSKKGGKAAVAQMIEILVEKNHLEEEWNKL
                     WL"
     gene            complement(9541..10368)
                     /locus_tag="RJ239_000421"
     CDS             complement(9541..10368)
                     /locus_tag="RJ239_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HDV7330564.1"
                     /translation="MQIKTITLKLSAVSLGALFFSGCLGTSFFSSLDNAQVYYPSNDF
                     KSSPSSSGTKGTMKPYTINGKTYYPTVVAVGETADGIASWYGPGFHGKKTSNGETYNQ
                     NALTAAHKTLPMNTILKVTNLNNNRQVTVRVNDRGPFVNNRIIDLSKGAASQIDMIAS
                     GTAPVRLEVIGFGSSNSGNNIVHSNVNYGNSGEIANNGQIYEGGNFMVQIGAFKNPAG
                     AQTIAARYKTYRTYSSTIRTSSVDGLNRVFLTGFRSEDEARDFAASGAFAGAFVVRE"
     gene            complement(10328..11446)
                     /locus_tag="RJ239_000422"
     CDS             complement(10328..11446)
                     /locus_tag="RJ239_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HDV7330565.1"
                     /translation="MKKILLCFLICFNFLFAQINTPEFYERQMNVLRNLDINPSFISD
                     LIFVQTQQDIKSKHAQTLIDSMQNFSKVTPMIRKILAQQEVPDEILYLAMVESGLKTH
                     SVSNAKAVGVWQFMQPTARNLGLRIDAYVDERRDPVKSTYAATNYLKELKEEFGKWYL
                     ALLAYNCGNGKLRQAIKQAGSDDLSVLLNPDKKYLSLETRNFIRKILTLAFLANDRDF
                     LLDKDASLMNYALSNEFAKVDVPSSASLKEIAKNLNMDLATFKKYNPQFKHNFTPPGK
                     GYYMYIPLNKVAFFDKNFKAEKLAKVDTTIPMTRTYTVKSGDSLYKIAKNYNISVDEI
                     REFNKIAKNHLSINQKLIIPIKENKNANKNNYTKVVSR"
     gene            complement(11446..12261)
                     /locus_tag="RJ239_000423"
     CDS             complement(11446..12261)
                     /locus_tag="RJ239_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HDV7330566.1"
                     /translation="MFLNLDFQDGLRIVDTHCHLDSEAFKDDLDETLNRAFKNGIEKI
                     IIPGADIKDLPYAATIAHKYKNIFFAAGVHPYEIDNYDEKILRQYLCDEKCVAVGECG
                     LDYFRFKSDLAEEIQKEKENQKKIFIAQLELAIEFKKPVIIHSREANHDTYEILHGYS
                     KDLVGGVLHCFNASEHLLTLFEEGFYFGIGGVLTFKNAKKLVEILPKIPKDKLLLETD
                     APYLTPEPYRGKRNEPLLTQFVVNKMCEVLNLSRKELLEICFNNSEKLFFKGY"
     gene            complement(12252..13496)
                     /gene="cbrR"
                     /locus_tag="RJ239_000424"
     CDS             complement(12252..13496)
                     /gene="cbrR"
                     /locus_tag="RJ239_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile resistance response regulator CbrR"
                     /protein_id="HDV7330567.1"
                     /translation="MNKKILIIDDNKMLGKLLAKKIQMTLDYEVDIAFGFAEAKELMN
                     NDYFLAFVDLCLPDAPNGEVVDYVIEKKIPAIVLTASGDKATKEKFMDKDILDYIFKE
                     SETCIDEIISSIVKLNQYAKTKVIVAMSKLPERNEIKKILTQRQFNVLAAAHGEEAMS
                     YLNDNNDVKLIIADVNMPVISGFELLTQVRERFSDDELGVILLGDHNDSFEANSFKNG
                     VNEYLFKPLSKESFNCRLDRCLSYMDDKKFLSTYNVLDPVSGVKNYNALIDGIDDYFN
                     EIATKDEEFAFAFLDIDNLQMINDEYGREVGDEVIKICANEIVNETKGRDLVGRYSAE
                     KICILLKNISQERAIKIFSRIRVNIKKAGVLVNLDEVFFTASIGVVFGKSGDKIDSLA
                     DKASKILSQAKDNGKDRVEVCS"
     gene            complement(13602..15125)
                     /locus_tag="RJ239_000425"
     CDS             complement(13602..15125)
                     /locus_tag="RJ239_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDV7330568.1"
                     /translation="MINRIFMKENLGFKKAELEISKGLTVFTGLSGAGKSVLFKGILS
                     AFSLSESEAKIVEIEVDDKLDLESFGIESEEENVFKLLKEKNTKYFINNQSIAKKSLQ
                     NLSKTFIKYLSAKENNEFGNEKFLNLLDALEMQENTNFISFLEDFKKDFNAYSQISNE
                     LNAILEEEKKVEELKELARAQIEKISSINPKIGEYEELLILKKKLSKKDKLEEAWSKA
                     ERIFELEKVVIEALNLSEVDASFFSECLNELRVICENQKMEDLDFDVEALLDRIENLS
                     YLIKRYESIENALEVLKQKKYELEHYENLSFEKKELEKKFQELKQKLEEKAQILTQTR
                     KKNLKKLEKCLNNYLKDLYMKDASLTLKENEKISILGKDEIMLDINLAHLKNLSSGEL
                     NRLRLAFIATECNILNAGKGILFLDEIDANLSGKEAMSIAKVLEELSKFYQIFAISHL
                     PQLSSKAHNHFLVEKNGEESKVKKLDQEERIKELARMVSGELVSDEAIEFAKTLFKN"
     gene            complement(15125..15985)
                     /locus_tag="RJ239_000426"
     CDS             complement(15125..15985)
                     /locus_tag="RJ239_000426"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HDV7330569.1"
                     /translation="MQNKIDYKNIKKIGLVTRPNVSLDKEILKLQSILSIYKVELVLL
                     KESSEILDLPKYGLDDLFKISDFVISLGGDGTLISLCRKACEYDKAVLGIHAGHLGFL
                     TDFKVDEAENFFQAFFQGEFRIEKPYLLSIFLEDRQGKILEKLAFNDVVISKNNQASM
                     AHIEVFRKEKKFNEYFGDGLIVATPAGSTAYNLSANGPIVYTLAQAFILTPVCSHSLT
                     QRPIVLPKGFEIEIMAKDCMLCIDGQENYKMNDFKSIKVGLSDKNVALIHPKNRDYFQ
                     ILKEKLHWGN"
     gene            16076..17827
                     /gene="aspS"
                     /locus_tag="RJ239_000427"
     CDS             16076..17827
                     /gene="aspS"
                     /locus_tag="RJ239_000427"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HDV7330570.1"
                     /translation="MRSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGI
                     IQLVCDPNDSKEAHEIASNARNEFVLITEGTIRPRGEGLVNPKLKTGEIEVVVSKLTI
                     ENESAVPPFAIADESVNEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFL
                     EVETPILTKATPEGARDYLVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCF
                     RDEDLRADRQPEFTQIDVEMSFCEQKDVIKVAETFLKDIFKACGKEIQTPFRQMQYKD
                     AMENYGSDKPDLRFDLKFIDVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFS
                     KRQMQRFEEFVRKFGAQGLAFIQVKKDGLKGPLCKFFSEEDLNELSKRCELEVGDVVF
                     FGAGAKKTVLDYMGRFRIFLANELKLIDPNALEFLWVVDFPMFEQNDDGSYSAMHHPF
                     TMPKNIDETDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEK
                     FGFLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPA
                     SNEAMRELGIKLRENIK"
     gene            17824..18402
                     /locus_tag="RJ239_000428"
     CDS             17824..18402
                     /locus_tag="RJ239_000428"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HDV7330571.1"
                     /translation="MKELFLIIGAPGSGKTTDASLIAQADATNITHYSTGDLLRAEVA
                     SGSELGKTIDSFISKGNLVPLDVVINTIVYALKAAPTKTIIIDGYPRSVEQMMEFDKV
                     LSEQNEICLKGVIEVRVSEEVAKERVLGRNRGADDNEEVFYNRMKVYTEPLNEILDFY
                     QKKKLHFIIDGERTIEPIVADMKELIKKIQSI"
     gene            18412..18930
                     /gene="ppa"
                     /locus_tag="RJ239_000429"
     CDS             18412..18930
                     /gene="ppa"
                     /locus_tag="RJ239_000429"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HDV7330572.1"
                     /translation="MNLSKIKIGDIPNKINAVIEIPYGSNIKYEIDKDSGAIMVDRVM
                     ASAIFYPANYGFIANTLADDGDPVDILVLNEYPIQAGAVIPCRLIGVLIMEDESGMDE
                     KLLAVPNSKIDARYDNIKTYTDLPQATLNKIKNFFETYKILEPNKWVKVQDFKDEKAA
                     IEILEKAIKNYK"
     gene            18971..19468
                     /gene="msrA"
                     /locus_tag="RJ239_000430"
     CDS             18971..19468
                     /gene="msrA"
                     /locus_tag="RJ239_000430"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDV7330573.1"
                     /translation="MKNIVLGGGCFWCVEAVFERLKGVINTEVGYSGGKPNPSYESVC
                     NGDGNIEVVKINYDEKQISLLEILTLFFKIHDPTSIDKQGGDIGIQYRSIIFYENEED
                     KILAQNFIEEQQKIFSKKIVTKISRLQTYYKAENYHQHYFINNPDQGYCQAVIAPKLQ
                     KIQSD"
     gene            complement(19644..20483)
                     /locus_tag="RJ239_000431"
     CDS             complement(19644..20483)
                     /locus_tag="RJ239_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HDV7330574.1"
                     /translation="MQNILSSFAQEKNVCVFANTLKTSIEELEKEFLKQNLKFKKINV
                     YCYLFDAKDKAILSSMKAFNEAHFYIQNYSSYLCALNLEVKAGQSVLDMCAAPGGKSI
                     NLANFMQNTGYLACNEMSRDRFFILQKNLKNYGVNAKVFMKDGKNIGNLCPLKFDKIL
                     LDAPCSTFAKIGFDLEKSYKEIKNIAKTQKKLLHSALKALKIGGELVYSTCTFTKEEN
                     EEVIENALKSEFKLELLDIDLENVEAKAGQSEEFAEISKCRRILPSLDYDGFFIAKLR
                     KLC"
     gene            complement(20512..20895)
                     /gene="ruvX"
                     /locus_tag="RJ239_000432"
     CDS             complement(20512..20895)
                     /gene="ruvX"
                     /locus_tag="RJ239_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HDV7330575.1"
                     /translation="MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKN
                     LLKILEISLLIVGIPKGGSSEEEMTRRIKHFVSLLEFDKEICFVDESGTSKEALGYGV
                     ANTRKKDGKLDSLSAFIMIKDYFAL"
     gene            complement(20892..21665)
                     /locus_tag="RJ239_000433"
     CDS             complement(20892..21665)
                     /locus_tag="RJ239_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HDV7330576.1"
                     /translation="MASEILPDEFLELFKDLKKPPKKLHYKGNLSLLKQDKIAIIGSR
                     RMSVYTKNCVFSLASMLKNAHLCVVSGGALGVDITASMAAMPNTIGIFANGLDQIYPR
                     TNEKIIKQIYENALALSEYEDDYLPKNYDFLLRNRLVIALSKAVVVAQADIKSGSMQS
                     AKLALELNKPLYVLPQRLEESTGTNFLLKENKSKLICDFKEFVSEFASIDINQDEFLE
                     FCKKGVSVDEALKIYGQKVYEYELEGKISIEGLFIRVLA"
     gene            complement(21655..22737)
                     /locus_tag="RJ239_000434"
     CDS             complement(21655..22737)
                     /locus_tag="RJ239_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HDV7330577.1"
                     /translation="MSKKKLVQIQRYLIIAILFLLCIALALGILVKYQNSQDVSSVKP
                     DYFIDKQEDLISLNKDHYEIGIFQENEFDNNKSVSILEQKIQEIDDLNTSLNEQNLSS
                     VEQNLSLEQNQSLEQNFILKDTNLTQDQNLTFNEDIHLNKISKKPKLAIIIDDMANAS
                     QVRGLKALNLKLNPSFFPPDKNHSETPKLALKFDFYMVHLPLAAINYNKPEIDTLNPN
                     DSKERIFKKIKQIKKDFKDLRYINNHTGSLFTSNEEAMRKLYEALKNQNIFFVDSKTI
                     GNSKANKIAKELSMPYIQRDVFLDNEDDVNYVKKQLESAVKLAQKKGFVIAIGHPRKN
                     TFKALEQSKDLLKGVDLVYLSEIYGK"
     gene            complement(22741..23763)
                     /gene="ilvC"
                     /locus_tag="RJ239_000435"
     CDS             complement(22741..23763)
                     /gene="ilvC"
                     /locus_tag="RJ239_000435"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HDV7330578.1"
                     /translation="MAITVYYDKDCDLNLIKSKKVAIIGFGSQGHAHAMNLRDNGVNV
                     TIGLREGSVSAVKAKNAGFEVVSVSEASKIADVIMILAPDEIQADIFNVEIKPNLSEG
                     KAIAFAHGFNIHYGQIVVPKGVDVIMIAPKAPGHTVRNEFTLGGGTPCLIAIHQDESK
                     NAKNLALSYASAIGGGRTGIIETTFKAETETDLFGEQAVLCGGLSALIQAGFETLVEA
                     GYEPEMAYFECLHEMKLIVDLIYQGGIADMRYSISNTAEYGDYITGPKIITEETKKAM
                     KGVLKDIQNGVFAKDFILERRAGFARMHAERKNMNDSLIEKTGRNLRAMMPWISAKKL
                     VDKDKN"
     gene            23882..25816
                     /locus_tag="RJ239_000436"
     CDS             23882..25816
                     /locus_tag="RJ239_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacB/RNase II family 3'-5' exoribonuclease"
                     /protein_id="HDV7330579.1"
                     /translation="MKEFLNSLSYGISSHEVNNEFKQIFRELLTNHIIKEHKNKYYLN
                     NGFAFGVLDISSKGTGFLQCFDESFKKDLLIENKNLKGANYKDIVAVKLLPLKKKRPS
                     AKVILVLKRANETSLMITKRYGQAVLGMNIKTGLSTALKASQKSLKALPLGTILKIEN
                     ENNNIIEVLGHIDDESVDEKISLALFNKNNEFSDACIKEALANGDSVDASMYENRMDL
                     RALPFCTIDPIHAKDFDDAIYFDTQKREIYVAIADVSEYVYAYSAIDKEARNRGFSIY
                     FPHIAIPMLPRPLSENICSLKPHLDRLAYCFKITLNHENKVIKEELFEGIINSKRRFN
                     YDEVDEILIQKPDLKELSWLYELFEITKNLRKMRLKNAFEFRTEELRMNLDENLSLKS
                     TVFEKDTPSHNLIEDCMLLANKAAAKLIDIGVFRNHLSADVRKIDKLLNELRELGIDV
                     NFKPNLPELIRDIQALADELNLRAEVDKLIIKAQKKAEYSSVNAGHFGLGFDKYSHFT
                     SPIRRYSDLILHRLLKAKQKNDEKLFNYLLLNIESTCENLSTLEREADKVAFDFMDRK
                     FARWAAKNIGKKFKALVVQNDGVCIAKLDDEIKGADIILYDTRVNLLENVEVQIMEAD
                     IVMAKIYAKITQRLIKEENV"
     gene            25809..26774
                     /locus_tag="RJ239_000437"
     CDS             25809..26774
                     /locus_tag="RJ239_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HDV7330580.1"
                     /translation="MYRKELQILLSKDSIPNFFFLYGADNFQSELYAEFIKEKYKPDE
                     TLKLFFEEYNFTRASDFLSAGSLFSEKKLLEIKTSKKIPTKDLKVLVDLCKNNADNFF
                     LLELYDESSKQSDIEKIFSPHFVRFFKANGAKEGVELLSIKAKQLGVEITQNALFTLF
                     TSFDENLYLAASELNKFSGLRVDEKTIEQYCYSLNTGSFESFFEKILKKQDFKSELEK
                     ILDNFNEIALINSLYNSFYRLFKIALYAKVNGKIDFKDLLGYTPPPQVGQNLSSQAFS
                     LKIEQYKEIFTLLLKSEYELKTNSKLVKKEFLISNLLKLARILKS"
     gene            26867..27910
                     /locus_tag="RJ239_000438"
     CDS             26867..27910
                     /locus_tag="RJ239_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction enzyme HsdR N-terminal
                     domain-containing protein"
                     /protein_id="HDV7330581.1"
                     /translation="MDFENQLNAIVETIAERKTLVNTEEATKMTFIMPFLKTLGYDVF
                     NPSIVVPEYTADIGTKKGEKVDYAIFKDSKPFILIEAKNHTENLDNHNNQLVRYFNTN
                     PSIKFAILTNGIEYRFFTDIEQQNLMDKIPFLVVNLEKLKPRDIKDLKRFICTDLNLD
                     EILSIAMEKKYYRSIQEIFKSEIENPSDEFTSFFAKQMTEKRMTSAVLEEFKNYIKKS
                     FKEIINDLAYEKITSIKNNLQNINDDENDEQIDESKDIVTTEEELQGFYIVKSILASV
                     SANLEDVSYKDTLSYFSILYQGKVTKWICRLYFNTSKKSISFPDGASYNIEKLEDIYQ
                     YKADIIKAFESRK"
     gene            complement(27932..28276)
                     /gene="hypA"
                     /locus_tag="RJ239_000439"
     CDS             complement(27932..28276)
                     /gene="hypA"
                     /locus_tag="RJ239_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HDV7330582.1"
                     /translation="MHELSIVESLIELCEENALNNKACNVQEIYVKIGRLSGIEVDLF
                     KRCFETFKENSNICKNAKLFIELAPLEILCLKCDQTSILEENVFKCPKCQSIEYKITQ
                     GEDLHLMRLVME"
     gene            complement(28276..29250)
                     /gene="hypE"
                     /locus_tag="RJ239_000440"
     CDS             complement(28276..29250)
                     /gene="hypE"
                     /locus_tag="RJ239_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein HypE"
                     /protein_id="HDV7330583.1"
                     /translation="MKNISLAHGGGGEEMNELLTKLFKIFDNEILNANNDAAILGNLA
                     LSTDSFVLSPIFLDEEVNIGKLCVCGSINDVLMVGAKPKYLSLGLILEEGFELEKLER
                     ILKSIKEECEKCGVMLVCGDTKVVPKGKADEIYINTTALGEIISKKESKNIKAGLSIL
                     LSGDIGRHGASVLIKRNELEANVKSDCKALDKEVLELLEKDIKVVAMRDATRGGLSAV
                     LNEWAKQSGNDLLIFEEKIIVQDEVLGLCELFGYEAYELANEGTFILCVEKEDGLKAL
                     EILKKYNVNASIIGEVLEEKKARVILQNAYGAKRFLESPKGELLPRIC"
     gene            complement(29247..30338)
                     /gene="hypD"
                     /locus_tag="RJ239_000441"
     CDS             complement(29247..30338)
                     /gene="hypD"
                     /locus_tag="RJ239_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HDV7330584.1"
                     /translation="MNFIDEFRDKKSILALKKLIEQELKNPINIMEICGGHTHSIMKY
                     ALPSILPKEINFIHGPGCPVCVMPRVRIDTAIKLASMKDTIFCTLGDLLRVPGSEISL
                     LDLRAKGADVRALYSPLEVLEIAKQNLNKNIIFFAIGFETTTPMSALLLQKLIEEKIN
                     NVFFHINHITVPAPVEAIMNDENVKINAFLGPSHVSVITGYGIYEPLAAKFKTPIAVS
                     GFEPVDILESVLNIIKQSNEGTFKVYNQYKRAVSKEGNVKAQNLVKKYFKVCDFEFRG
                     LGLIKDGGLELKEEFSAYDASKKFDCAVQSKNESKACICGQILRGLAKPYDCKVFGKA
                     CTPRSPIGSCMVSGEGACAAYYKYSKVNA"
     gene            complement(30322..30603)
                     /locus_tag="RJ239_000442"
     CDS             complement(30322..30603)
                     /locus_tag="RJ239_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HDV7330585.1"
                     /translation="MCLSIPSEILEIDELNNALVQTLGVKRKVNLDLIDEPLKQGDYV
                     LIHVGVAMEKIDKEAALESIKTYQEIVEKMNSGEIKSDEGDLGLNEFHR"
     gene            complement(30603..31346)
                     /gene="hypB"
                     /locus_tag="RJ239_000443"
     CDS             complement(30603..31346)
                     /gene="hypB"
                     /locus_tag="RJ239_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HDV7330586.1"
                     /translation="MCKDCGCSINSSHTHDHHHDHHHENPSLKESKTIEVISKILSKN
                     DEEAKHNRAHFNETNTLCINLMSSPGSGKTTLLESTIKALKNELKIAVIEGDLETNND
                     AIRVKNAGALAYQITTGQSCHLDAFMVHEALHHLAIDDVDLLFIENVGNLVCPASYDL
                     GEHLNVVLLSVTEGSDKPQKYPVMFKKADIVLITKADLAHHFDFDVKEATRLIKELNP
                     RADIITLDAKNDTNMELWYKVLKLKKELF"
     gene            complement(31423..33612)
                     /gene="hypF"
                     /locus_tag="RJ239_000444"
     CDS             complement(31423..33612)
                     /gene="hypF"
                     /locus_tag="RJ239_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HDV7330587.1"
                     /translation="MCHLGYKIKISGLVQGVGFRPLVYELALKSKLFGEVRNDGFGVE
                     IILACTQKECENFIENLKNHLPPLARIDQLIITQISISNYENFSITPSLENTKSTPML
                     SDFALCKECKKEFFDEKNPRFLYPFITCTHCGPRFSIIKSLPYDRAHTSMQELLMCEF
                     CKSEYEDPKNRRFHAQPISCPKCKINVFLKNPKGEILAKDQEAFIQSAKFLKEGKILA
                     IKGMGGFHLMCDAFNEEALKTLRLRKNRPKKPFALMCKDLQSAKELAFIDEKEEALLG
                     GVLAPIVILKAKKAFSLIAPDVDKIGIMLAYTPLHLLLFEYFKGSLVATSANLSGESI
                     IKDEFNLRQKLDKVFDFYLDYDREIINASDDSIAQVVNGKTMFLRTSRGLNPFYLERN
                     FNKKGTFLALGAELKNEFVIFYENKLLISPYIGDLKSLDVHERFFKLLEFFKQNYDLK
                     FDAILCDKHPHFSYAKEFEERIKISHHYAHFCAAYFEYEENFAKDEKALAFICDGTGY
                     GEDGKIWGGEVFVGNLKEYERIAHFENFTLINSDIKNIQNLALSLIFHYDLEDKAKDF
                     LAKIPKIKLKNLKKIYSHSNLQTSSLGRIIDAFGSIVFNLEKSSYEAQVGLMCEAFYD
                     KNLDFSYKLFVEKGQVNFKNLILGALQDEKTKAITGMFNALANFIIDFSKDYDLKVLL
                     SGGVFQNKTLLEILKAKNFDFFVPLKYPCNDSSIALGQMVHFLNLEK"
     gene            complement(33593..35113)
                     /locus_tag="RJ239_000445"
     CDS             complement(33593..35113)
                     /locus_tag="RJ239_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330588.1"
                     /translation="MTLDFDFIYNADNDIFEYLLRFYAKNYNYTLSKEENTYHFSIDA
                     DEENLKTFCDSLNLMSHSVFLKKFDVKAGQDFNPCIPEDKEFSKFSYITHLNSNAYQE
                     KKLLNKNEWGVFCECEFSSNLSEFEKINEENFNTFLNLAFDLLSQEKKIYLKDKNGIY
                     EFSLFKNEFIGDFLLPCDIKAINSVFVCSNENLKLLASLEKPLMKLRLNAIFRKNHNL
                     DFNDFKIRLARDLFCFALGLKLFENEYKFLSVKKIEEYQKDFYISALDEQVVVLEGFE
                     FINAKARELIFSKEDKNMARISYLVSRYKEKAFILELSKDDEDILLINKELNLLKLCL
                     PKHSKELYEEIKKDEIGARLLENFSKEFPLLDENFELQNNFYSLFGLVGRVLNLGKNL
                     QESVSELLKIADESKMPRGVKIDYRLKEDKSFDYTRTLRSAMSFMLAGVDSANIAYGA
                     VESLAYFLRDTYDELREKKQSDLALISGSLFEHKSLLKNTLKHLKNCQLSDVPLRI"
     gene            complement(35155..35802)
                     /locus_tag="RJ239_000446"
     CDS             complement(35155..35802)
                     /locus_tag="RJ239_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDV7330589.1"
                     /translation="MARQSSSLKSFIYKDECYFYSKKRIKTLRLRINERGEFVLSIPY
                     FCTFKSVYEFLDKSSSWMNEAKKRFEKKVLKDDELIFLAKKYKIIFDENVKKTYFDKD
                     KIICQNKAKLDLFLRQNAKKIFTFYLKKWSQKTGLFYTHLSIKNMKTRWGSCNHNKAY
                     INLNLKLIQKSLRAIEYVILHEICHLKFPNHSKEFYDFIEYFMSDFRQREKEFLS"
     gene            complement(35778..37094)
                     /locus_tag="RJ239_000447"
     CDS             complement(35778..37094)
                     /locus_tag="RJ239_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HDV7330590.1"
                     /translation="MAKKQLSLTRLSFPIFWDLLSKYLTVIINTAMVSHYSNFLVGAM
                     GAGNQILDLFITIFSFLSVGCSVVIAQAIGAKDHVLARKVIHQSLFLNALLGFVCGVL
                     ILWHGEYLLYLLKIPQELLKDSEIYLHMLAICLFFDAIGIVLAAIVRVYNMAYWVMLI
                     GFLMDIVVICGNYYVLHYTKSELFGVGLSNIFARIVAIVALLVILFYKLKIHLKIKEM
                     IKLEKEVLKKVLNIGGFSAGENLLWIVQYTIAFAFVASLGEASLSVQTIYFQISMLIM
                     LIGQATSIANEIIVGKLVGARYENIAYKHAWRALYFSVIASALVALLNYLCQDFTMQI
                     LGLKEELKNLMIPLFALSIFLEISRTFNIVMVNSLRASGDAKFPFFSGLVFMMGVSLP
                     VGYVLCFHFNLGILGVWIGFCADEFLRGMVNSYRWKSKKWQGKALV"
BASE COUNT        13012 a         6311 c         4897 g        12930 t
ORIGIN      
        1 atattttaag cataaaaaaa agaaaggtat tgggaagtga ctaaacaaga aatacaaaaa
       61 ctcgatacaa atttcctagg tcatcgcaag cccttattct ctttatcaat ggtagaactt
      121 tgggaaagat ttgcttttta tggcatacga tctttacttg tgcttttcat ggcaacaacc
      181 ataagcaaag gtagacttgg aataagcact gaatacgcct cggcaattta tggcattttt
      241 gcaggatgct tgtatttagc agcacttcct ggaggctgga ttactgataa ttatttaggg
      301 caaaaaaagg ctttattttt aggttctttt attatagctt taggacatat tagcatagcc
      361 ttatctattt taagcacacc tatgtttttc ctagggctta cttttatcgt tattggtact
      421 ggatttttta aaactaacgc ttctgtaaca gttggaatgt tgtataaaca aaatgataca
      481 agatgcgata ctggctatac gattttttat ataggaatta acattggagc attcattgct
      541 cctcttatat gtggttttgt tcaagcaaaa tggaattatc atttaggatt tgtcatagga
      601 ggtttaggta tgctaatctc tttgcttatt ttatatttta aagctgccct tgagcttgaa
      661 gaatttcata aaaattgaac cttaaagcaa aactgggaat aaccatttaa aaaagtaaaa
      721 aatttaactc ttatactaag tataagcttg ttaagtatta ttggattttt tctaatgttt
      781 attaatcttg taaatattaa tcccatataa tactatcaaa aaaacttcta attgtaattt
      841 tactatgttt ggtaatttat ttcatatatc tttttgtttt taaagcttta aataaaagag
      901 aaaaacagca attaacaatt ttaattgttt tattctttgc agccactttt ttttggagtg
      961 cttttgaaca aaaacctact gcttataatc tttttgcgca agattttaca aatagaaata
     1021 tttttgattg gaaaattcta acaaactggt ttcaatcttt taatccaatt tttatcatca
     1081 tacttgctcc tatagcaagt tatatttgga tatttttaga gaaaaaaaat atatattttt
     1141 cttccattgg aaaatttact ttaggaatat tatttgccgg tattggtttt atgatgatga
     1201 cctttgcttc acaaaatcta ataaacaaca atggtttgcc aatatccatg gcttggatta
     1261 tcataagtat attcttttta acacttgggg aattatgcgt gtctcctatt ggactctcta
     1321 taatggctaa ggttgcccct gatttaatca aaaatcaaat catgggactt tggtttgtag
     1381 caagtgcgct tggaaatttt gttgcaggac ttataggagg aaatgtcaat attaaaaaca
     1441 tcgatcaact tcctaatatt tttggacaat gcatgtggat gctttttgtt gtagcacttt
     1501 tgctttttat tgctaaaaaa ccatcttaac aaaaaaaata agcaattatc taactaaact
     1561 taaaatacaa aatacaccaa agttgaaaat tgatcttaat atttcttttt ttatatttgc
     1621 aaaaaagtaa cattatgata taaatcattt aaaaatatta caaagttata catatttttt
     1681 aatttcttgt ctataattta taaataaaaa tacacaaagg atataaattg agtaaaaatg
     1741 taaaaaattt agatacttca ttttttggac atccaaaacc acttttatct ctttcactta
     1801 ctgagctttg ggaaagattt tctttttacg gaattcgtcc cttgctttac ctttttatga
     1861 tagcaagttt tgaaaaaagt ggaatgaact taaaacctga agaagcaagt gcaattatgg
     1921 gaatttttgc aagttgttta tatcttgctg ctttgccagg tggatggctt gcggacaatt
     1981 acttaggaca aaaaagagca attttactag gtgctttaac tatagcattt ggacatttgt
     2041 gcatagcctt ttcttatttt aacaataaaa tgatttttgt tggtatggtt tttttggtta
     2101 taggtacagg actttttaaa acttgtgctt ctgtaatggt tggaatgctt tataaaaaaa
     2161 atgatgcaag gcgtgactct ggttttactc ttttttatat gtgctttaat tttggtgctt
     2221 ttgtagctcc tttaatttgc ggctttttac aaaaagaata cggatggcat tttggttttg
     2281 gtgcaggtgg gattggtatg cttttagcgg taattatttt ctacctaaaa actatgcctg
     2341 atttaaaaga atttgatgaa aaagttggca tagactctac ttgggataga ccaagcaaaa
     2401 aaagcaaaaa cgcattttac atcatcattg tatcaggtat tgttttgctt ggagcaatat
     2461 ttttaatcct tggtggtttt ataaaattag atgcacaagt tattaataaa aatattattc
     2521 taactatctt agcttgtgct ggaatttatt ttttatatct tttcgctttt acttctttaa
     2581 aaatagaaga aaaaagaaat ttaattattt ttattgtttt atttttagcg gctgcgttat
     2641 tttggtcagt atatgagcaa caatacactt cttttaattt ttttgcagaa aaattaacag
     2701 ataaaaccat attaaattat gaaattccta caatatggtt tcaatctctt ggaggtttat
     2761 ttgttatact ttttgcacct tttagtgctt ttatatggac tatatgtgcc aaaaataata
     2821 aagaaatttc atctattatt aaatttgcat taggactttt gggtgcagct ttggcatttt
     2881 taataatggc tttagcttca aatcatgcaa ttagtttaaa tggcgatgct aatacattaa
     2941 gagaaaattt agaaaattca tcacaaatta ttttagtttc accttggtgt cttgtcagta
     3001 gctttttgct tatggtttta ggagagcttt gcctttcccc tgtgggactt tctataatga
     3061 caaaaattgc acctaattta attaaatctc aagtcatggg actttggttt gtagcaagtg
     3121 cattaggcaa tgctttagct ggattcatag gtggtaaagc aagtgaagaa aatatagctt
     3181 atttgccaaa tttattttac caatgtatgt ggatattact tggtgctgtt ataattttac
     3241 ttatactcaa aaaacctatc aataaaatac taaaaaatta atattaagga gaaaatatga
     3301 gtatttacaa acaaagagta ttagaactta gaagattaat gaaagaaaat aatattgacg
     3361 cctatctcat cttaagcgcg gatccgcatt tgagcgaata tttaccagaa tattacaaaa
     3421 acagagtctt tatcagtggc tttaagggtt ctgttggaac agttcttatc acacaagaag
     3481 agggcttttt gtgggtagat ggaagatatt ggcttcaagc acaaaaggaa ttagaaggta
     3541 gtggcatact tttacaaaag caagatgcta aaaatacttt taccaaatgg ttggaaaaaa
     3601 atttaagcga agatcaaatt ttaggcatcg attttgcact tttaccttta tctttgcaaa
     3661 aagatttaaa gattaattgc aaggcaaatt taaaacatat agatttgata agtccacttt
     3721 ggaaagatcg tcccacttta ccacaagaaa aaatttatga acacgaacta gaatactgct
     3781 cttactcaag aaaagaaaaa ttagcattag tgcgtcaaaa aatgaaaaat ttaaatgtta
     3841 cctctcattt aatctccagc cttgatgata tagcttggct tacaaattta agagggaatg
     3901 atgtaaatta taatcctgta tttttaagtc atttgctaat cttggaagac aaagctttgc
     3961 tttttgttga tcagaaaaaa gtaaattcag aacttgaaaa aaaattaaat ttagatgggt
     4021 tttggcttaa aaattatgat gaaatcatca tggagcttga aaaacttgca aatacaaatt
     4081 tgcttattga accttcaaaa atgaccgctt tactcataaa ttctttagat aaaagcgtaa
     4141 aaatcattca agaaattaat ccaagcactc acttaaaagc agctaaaaat acaaaagaaa
     4201 tagcgcatat acaagatgct atgatagaag atggagtggc tttatgtaaa ttttttgcct
     4261 ggcttgaaga agcgataaaa aataaagaac taataagcga attagacata gatgttaaag
     4321 caagcgaatt tagagcacaa agcaagtact acataagtga tagttttgcc actatagcag
     4381 gctttaacga aaatgcagca tatccacatt ataaagccac aaaagagagt tttgcttatc
     4441 ttaaaaaaga tgggctttta cttattgatt ctggtggaca atataaaaac ggcacaacag
     4501 atattacacg cgttgtacca ataggaaagg ctaatgcaga acaaattcat gactatacct
     4561 tggttttaaa agcacatatt gccatttcca gtgcaatttt tccaaaagat ataactatgc
     4621 ccttacttga tgcaatcaca cgcgcacctt tatggaaaga acaaattgac tatatacacg
     4681 gcacaggaca tggcgtggga tattttttaa atgtccatga aggtccacaa gttttatctt
     4741 atctatcccc tgtgcttgaa aaaacaaaag ccaaagaagg tatgctaacc tccatagagc
     4801 caggtattta taaagtaggt aaatggggta taagacttga aaatttagtt attcatacca
     4861 aagtagaaaa tcctaaaaat aaagattttg gagagttttt atactttaaa cctgttactc
     4921 tttgtccttt tgaaatatct tgtattgata caaaaatgtt agatgaaaaa gaaaaagaat
     4981 ggttaaacaa ttatcacaaa gaagtatttg aaaaactttc tcctaagcta ggtgattatc
     5041 caaaagctct agtttggctt gaaaaaagaa caaaagccat cttttaagat acttttgtta
     5101 acatagataa attttccttg tattaaactt ataatttgtt taatacaaga tttttaaacc
     5161 aattgctaaa aaagtttttt ttgaaaaact caatttacaa ctaaaaatta tttaaaatat
     5221 ccaagttcaa tcattttttg ataaatttta gctacagttg cccctgaagt aatatttctc
     5281 ccaccatgtt ccaaaagaac ggtaactaca tattttggct tagaataagg agcataagaa
     5341 gtaagccacg catgagatct agtataatac tcaaattgtt tttcatcaac cctattttta
     5401 tctgtttgtg aaaatcccac aacctgagca gttcctgttt ttgctgcaac tttcacatca
     5461 agattatgca aataacgata agaggttcct ccttgctcat tagcaacagc atacattgca
     5521 tctcttatat aaggcaattg actcttttca aataaagtaa aaatttcttt tttattttca
     5581 tccatttgat tttctatagt tgtattatta ttttctatgc tttttaaaaa atgaggtata
     5641 acctctccac tttttgcgat ttgagccgta tatctagcaa tttgcatagg tgttgcaaga
     5701 aaattacctt gacctatagc tgtatttaaa gtatcacctt gaaaccaaga ttgtctatat
     5761 ctttgcatct tccattcttt gcttggtaaa gttcctacaa attcactagg taaatctacc
     5821 cctgttttca ctccaaagcc aatgcgagat aaagtttcac ttatttgatc gattccaact
     5881 tgcaaactgc cattataaaa ataaacatca caactatatt ttatcgcatg ttttaaatcc
     5941 acaggtccat ggcctgatcg attccaacat ctaaaaaacc tgcctccaag ctcaatgctt
     6001 ccattgcaaa cataatgagt cgacgggcta atatttttag aatttaaaaa agaaagccct
     6061 actcccattt ttacaacaga acctggagga taatatccat ttataagttt atttgtaaaa
     6121 ggatgatcaa gactatttga aagctcatcc caatccttaa aagaaatccc tgttacaaaa
     6181 ggattaagat catattcagg gaaactccct gcagctaaaa tagatccatc atttacattc
     6241 ataattatag cagctccagc attcccttca aacaatgaag ttaaataaga ctgaagctct
     6301 atatctatcg taagttctat atcattagac atagcaggag tgtaagaaag ctgttctact
     6361 tcttgattta aggcattaac cttataaacc ctagttcctt tttctccttg taaaatatca
     6421 ttataatagc gttctatacc gctttttccc gtatagttag aaagttttgc tatttcattt
     6481 tcttgaacat cttgcaaatt tgccttacct acatacccaa taatatgcga agctaatttt
     6541 ccaaaaggat attttctttt tacaacagga tctattttta ttgttttatt aagatttaac
     6601 tctgaataat gcgaaataat ctcatcatag ggtataaaat ctactacttt aataaaatct
     6661 tgattatagt aagaatcatt tctcttataa atttctgcta atttactagc atttaaatcg
     6721 ggaaataaat ttgtaagttc agataattct ttatccaaaa ttcctttatt tgacttttta
     6781 atactcaaat aaggtttaat agaaatacta aaacccaaat cattaatagc caataaagtt
     6841 ccatttctat ctgtaatttg acccctaaca ggtggcaaaa attcagtttt tatggcattt
     6901 tgtttagcaa gctcttcata atatacattt gattttatac tcaaataata cacacgactt
     6961 aataaaaata taaaaaacaa tagtataaat ccaacaacta aacgcattct catttaaatt
     7021 ttacctttaa aaaacacatg agctaaacaa cattctataa aaactgaaac aatatacgcc
     7081 catcctaaaa ttttaatttt ttcatctcca atataagaca atatcatatc caaaaacaaa
     7141 ataatgccgt aagcacaaag cacaaaaaca acagggataa atttaccaat ttttaaattt
     7201 gtcttaatcc aatctgcgca aagataataa aaaataaaaa atgccaacca agatgaaaaa
     7261 ataaaaaaat tataagttat atcagtaaaa aataaaaaaa ataaagaaaa ataccatcta
     7321 aaatcaagct ttgaaaaagt tctttctctc tcttctagta agcaaaacat ataacagaaa
     7381 aaaatcccat aaagtaacgg agcatatgca aaagtcgaac caagaatctg atagattaga
     7441 aaaaaaaatc ctaaaaagac ataagctcca ttaaattttg ctttataagc acttaaattt
     7501 cttctcattt accaagacct aaagtttgat tgataataat atcttccaaa gaatcaaggc
     7561 caaatttatt caaatttgaa actaaaatag agcctttaaa ttcatttttt aacttagctt
     7621 tttcactttg attcaattta tcgcatttgg taaaaacttt taaaattttt tgatcaggtc
     7681 gtaaaaatct tttcaaatag tcatttaaat ttacatcgat ctctaaatga gtatgtcttg
     7741 aatcgattaa atgtataaat aactttatcg aggttcttaa ttttaaaaat tcatctaagt
     7801 tttgattcca tatttctttt aaatttttag aaacctttgc ataaccaaac cctggcaaat
     7861 cgataaaatt gatattaaat ttttcttcat ttcttctgca aattacttcg aaaaaattta
     7921 taagctgagt ttttccagga gttgccgaac ttttggctaa atttttttgt ttacacaaag
     7981 aattgattaa agaacttttt ccgacattag aacgccccaa aaatgctact tcactaaaat
     8041 ttgagctcaa attctcatca aatttcacta aagaagtgat aaatttagca ctaattatca
     8101 tttgtcttta agatcaaaca caaaacgagc aggtttttga tccttactct ccactcgata
     8161 aatattagct tttctatcga ctattatttt atcaccaaaa agtttttgat tgcttccaag
     8221 ctcatttata taagcatgac cattaatctc gtaagtatct ttaataacat tataaataaa
     8281 tttatctcca ctacctttat aagttttacc ttttaaaaca atcttaaacc tagcattttg
     8341 cattgcttca taacgaatag gtttgcgatt tttatccgta taaataatca atttttcaga
     8401 atttaaaata tcatcacctc taattacttc tacatttcca ctaagaatac tttcaccctt
     8461 attttcatct gagtaaaaat ttaaagcttt tacttcaatt tgagttgccc aagttacact
     8521 tacacaaact aacaataaaa ttatttgtct tgcaaccacg cgtttactcc ttggatattt
     8581 aaaattttgt tttttacatc atagtttaaa gtatttccgt taataatact tccattgatc
     8641 agagctttaa aattagtatt tgtgtgtaaa attttatcct taggttggta ttctacctct
     8701 tgagaaataa ttttgacatt attagaacct atataagtaa catttccttc aaacaaaacc
     8761 ttgctcatat ctttattgaa aaactctaaa cgattcgcgc taagattaaa atctaaattt
     8821 aaagtaataa aatcattaaa ttcatctcta tctgcatatc tcacccaaga atttgcctta
     8881 taatatgcct taattatact agtattactc tcataagctt tcaaattttt agcctcaata
     8941 tttttaaaat ttaaagcatt agtttgcaaa ttcaaagaat acggatcttg caaacttaaa
     9001 atcgtaaaag taattgtaaa aagagcaatt aaaattccaa aaatttttat agccaaagct
     9061 tattccattc ttcttctaga tgattttttt ctactaaaat ttctatcatc tgtgctacag
     9121 cagccttacc accttttttg ctaagcacta tgtctacatt taaatcttta tgaccatctt
     9181 ttggcttaaa actaagtcct acactttcaa gcaaagcctt atcgttaaaa taatctccaa
     9241 tagccgcaca ctgagaaaaa tctaaattaa gtttttgtaa aatttctttt gcacaagcta
     9301 acttatcctt gataccttga tataaaattt ttatttttaa atctttagct cttttttcaa
     9361 cacaaggaca atttctacct gtaataatag caattttttt accaagcttt agccaagcct
     9421 cgatagccgc tccatctttt acattaaatt ctttaataaa ttctccatta gaagtataaa
     9481 taatcttccc atcagttaaa cagccatcta catccaaaaa aatcaattct gtcataattt
     9541 ctactctctt acaacaaatg cacctgcaaa tgcaccactt gcagcaaaat cccttgcttc
     9601 atcttcactt ctaaagcctg ttaagaaaac gcgatttaac ccatccactg agcttgtgcg
     9661 tatagtagag ctataagttc tataagtttt atatcttgct gctatcgttt gtgctccagc
     9721 tgggttttta aaggctccaa tttgaaccat gaaatttcca ccttcataaa tttgtccatt
     9781 atttgcaatc tctccactat ttccatagtt tacattagaa tgtacaatat tattacccga
     9841 attacttgat ccaaacccta taacctcaag ccttactgga gctgttcctg aagcaatcat
     9901 atcaatttga ctagcagctc cttttgataa atctataata cgattattta caaaaggacc
     9961 tctatcattc acacgaacgg taacttgacg attgttattt agattggtta cttttaagat
    10021 ggtattcata ggtaaagttt tatgagccgc ggttaaagca ttttgattat aggtttcgcc
    10081 attagaggtt ttcttgccgt gaaagcctgg cccataccaa ctcgcaatac catcagcagt
    10141 ttcgcctact gctacaacag taggataata agttttaccg ttgatagtat aaggcttcat
    10201 tgttccttta gtccctgaag aactaggact gcttttaaaa tcatttgaag gataatacac
    10261 ttgagcatta tccaagctag aaaaaaaact agtgcctaaa caaccactaa aaaataaagc
    10321 ccctagacta acggctgaca actttagtgt aattgttttt atttgcattt ttattctcct
    10381 tgattggtat aattaatttt tgattaatgc taagatgatt ttttgctatt ttattgaatt
    10441 ctcgaatttc atcaacactt atattataat tttttgctat tttatataaa gagtcaccag
    10501 acttaacggt ataagttctt gtcataggta tagttgtatc aaccttcgca agtttttctg
    10561 ctttaaaatt tttatcaaaa aatgctactt tattaagtgg tatatacata taataccctt
    10621 taccaggagg cgtaaaatta tgtttaaatt gtggattata tttcttaaaa gttgcaagat
    10681 ccatatttaa atttttagct atttctttta aagatgcaga agaaggcaca tcaacttttg
    10741 caaattcatt gcttaaagca taattcatta aagacgcatc tttatctagt aaaaaatccc
    10801 tatcattagc taaaaaagca agcgttaaaa tctttcttat aaaatttcta gtttctaaag
    10861 aaagatattt cttatcaggg ttcaataaaa cacttaaatc atcacttcct gcttgcttga
    10921 tagcttgtct tagcttgcca tttccgcaat tataagctaa aagtgctaaa taccatttgc
    10981 caaattcttc ttttaactct tttaaataat ttgtagcggc ataagttgac ttgaccggat
    11041 cacgcctttc atcaacataa gcatcgattc ttaaacccaa atttctagct gttggttgca
    11101 taaattgcca aacccctaca gccttggcat tagaaacact atgagttttc aagcctgatt
    11161 caaccatagc tagatacaaa atctcatcag gaacttcctg ctgggctaaa atttttctta
    11221 tcataggagt aacttttgaa aaattttgca tactatctat taaagtttga gcatgttttg
    11281 attttatatc ttgttgagtt tgcacaaaaa tcaaatcact aataaaactt ggattaatat
    11341 ctaaatttct taaaacattc atttgtcttt cataaaattc aggagtatta atttgcgcaa
    11401 aaagaaaatt aaagcatatt aaaaaacaca ataaaatttt tttcattaat aacctttaaa
    11461 aaataatttt tcagaattgt taaaacaaat ttctagaagc tcttttcttg ataaattcaa
    11521 tacttcacac attttgttta ctacaaattg agttaacaaa ggttcatttc ttttaccacg
    11581 ataaggctct ggagtaagat atggagcatc agtttcaagt agtagtttat cttttggaat
    11641 tttaggcaaa atctcaacta atttcttagc atttttaaaa gttaaaactc ccccaatacc
    11701 aaaataaaat ccctcttcaa aaagagttag caaatgttcg cttgcattaa agcagtgtaa
    11761 aactcctcct acaagatcct tagaataccc atgtaaaatc tcataagtat catgatttgc
    11821 ttctcttgag tgaatgataa caggtttttt aaattcaata gcaagctcaa gctgtgcaat
    11881 aaaaatcttt ttttgatttt ctttttcttt ttgaatttct tcagcaagat cacttttaaa
    11941 acggaaataa tcaagcccac attcacctac agctacacac ttttcatcgc ataaatactg
    12001 tcttaaaatt ttctcatcat aattatcaat ttcataagga tgcacccctg ctgcaaaaaa
    12061 aatattttta tatttatgag caattgtagc tgcataaggc aagtctttta tatcagcacc
    12121 aggtatgatg attttctcta taccattttt aaaagcacga tttaaagttt catctaaatc
    12181 atctttaaat gcttcactgt ctagatggca atgcgtatca acaatcctta aaccatcttg
    12241 aaaatcaaga tttaagaaca tacttcaact ctatccttgc cattatcttt tgcttgagac
    12301 aatattttac ttgctttatc agccaaagaa tcaatcttat ctccactttt tccaaaaacc
    12361 acgcctatag aagctgtaaa aaagacttca tctaaattaa ctaaaacacc agcctttttt
    12421 atatttactc gtatacgaga aaagatttta atcgctcttt cttgggatat atttttaagc
    12481 aaaatacaaa ttttttctgc actatatcta cctacaagat ctcttccttt agtttcattg
    12541 actatttcat tggcgcagat tttaattact tcatcaccaa cttcacggcc gtattcatcg
    12601 ttaatcattt gaagattatc tatatctaaa aaagcaaaag caaattcctc gtcttttgtt
    12661 gctatttcgt taaaataatc atctattcca tcaattaaag cattataatt tttaacccca
    12721 gatacaggat ctaaaacatt ataagtgctt aaaaattttt tatcatccat gtaagataaa
    12781 caacgatcta agcgacaatt aaaactttcc ttgcttaaag gcttaaacaa atactcatta
    12841 actccatttt taaaagaatt cgcttcaaat gaatcattat gatcccccaa aagaatcaca
    12901 cctaattcat catcactaaa acgttctctt acttgagtca aaagctcaaa accgctaatt
    12961 actggcatat tgacatctgc tataataagc ttaacatcat tattatcatt taaataactc
    13021 attgcttctt caccatgagc cgcagctaaa acattaaatt gtctttgagt aagtattttt
    13081 ttaatttcat tacgttcagg tagcttgctc atagctacaa tcactttagt ttttgcatat
    13141 tgattaagtt ttacaataga actaataatc tcatcaatgc aagtttcact ttctttaaaa
    13201 atataatcta atatatcttt atccataaat ttttctttag tagccttatc accactagcc
    13261 gtaagaacaa tagcaggaat tttcttttct ataacataat ccacaacttc accatttggg
    13321 gcatctggca agcataaatc cacaaaagct aaaaaataat cattattcat taactcctta
    13381 gcttcagcaa aaccaaaagc aatatctacc tcataatcta aagtcatttg aattttttta
    13441 gccaaaagtt tgccgagcat tttattgtca tcaataatta aaattttctt attcatagtg
    13501 tgtaaaatac ctttatatct aaaatttttt attatatttg tttcaaaaga aaggaaattt
    13561 ttatagttat atattttaac atagcaaaat aaaaaatccg cttaattctt aaataaggtc
    13621 ttagcaaatt cgatcgcttc atcactaaca agctctccac ttaccatcct agcaagttct
    13681 ttaattcttt cttcttgatc aagctttttt accttacttt cttcaccatt tttttcaact
    13741 aaaaaatgat tatgtgcctt agaggaaagt tgaggcaaat gagaaatagc aaaaatttga
    13801 taaaacttag aaagttcctc taaaacctta gctatactca tagcctcttt tccacttaaa
    13861 tttgcatcaa tttcatctaa aaataatatc cctttgcctg catttaaaat attacattct
    13921 gtggctataa aagcaagtct taagcgattt aattcacccg aacttaaatt ttttaaatga
    13981 gctaaattaa tatctagcat tatctcatct ttgcctaaaa ttgaaatttt ttcattttct
    14041 ttaagcgtca aacttgcatc tttcatataa agatctttaa gataattatt taaacatttt
    14101 tctaattttt taaggttttt ctttcttgtt tgagttaaaa tttgtgcttt ttcttctaat
    14161 ttttgtttta attcttgaaa ttttttttca agttcttttt tttcaaaact taaattttca
    14221 taatgctcta gctcatattt tttttgtttt aaaacttcta aagcattttc tatgctttca
    14281 taacgcttga taagatagga taaattttca atgcgatcta aaagcgcctc cacatcaaaa
    14341 tccaaatctt ccattttttg attttcgcaa atcacacgca attcatttaa acattcacta
    14401 aaaaaactcg catcaacttc gcttaaattt aaagcttcaa taacaacttt ttcaagctca
    14461 aaaatacgct ctgccttact ccaagcttct tctaatttat cttttttaga aagctttttt
    14521 ttaagtatta aaagctcttc atactcacct attttaggat taatgcttga aattttttca
    14581 atttgtgctc tagctagttc ttttaattct tctacttttt tttcttcttc taaaattgca
    14641 ttaagctcat tagaaatttg actataagca ttaaaatctt ttttaaaatc ttctaaaaag
    14701 gaaataaaat ttgtattttc ttgcatttct aaggcatcta agagatttaa aaatttttca
    14761 tttccaaatt cgttattttc ctttgcgctt aaatacttaa taaaagtttt acttaaattt
    14821 tgcaaacttt ttttcgctat gctttgattg ttaataaaat attttgtgtt tttttctttt
    14881 aagagcttaa aaacattctc ctcttcactt tctataccaa aactttctaa atccaactta
    14941 tcatctactt ctatttcgac aattttagcc tcactttcac tcaaagaaaa tgcggataaa
    15001 attcctttaa acaagaccga ttttccagct ccacttaggc ctgtaaaaac ggtaagccct
    15061 ttagaaattt caagctcagc ctttttaaaa ccaagatttt ctttcataaa aattctattt
    15121 atcatcaatt tccccagtgt aatttttctt ttaaaatttg aaaataatcc ctattttttg
    15181 gatgaattaa agccacattt ttatcactta aacccacttt tatactttta aaatcattca
    15241 ttttataatt ttcttgccca tcaatgcaaa gcatgcaatc ctttgccata atctctattt
    15301 caaaaccttt tggcaagaca atagggcgtt gtgttaaaga atgagaacaa acaggagtta
    15361 agataaaagc ttgagctaaa gtataaacta tgggtccatt tgcacttaaa ttataagctg
    15421 ttgaacccgc aggagttgca acaataagcc catctccaaa atattcatta aatttctttt
    15481 cttttctaaa aacttctata tgagccatag aagcttgatt gtttttactg ataaccacat
    15541 cattaaaagc caatttttct aaaatttttc cttgcctatc ttctaaaaaa atacttaaca
    15601 aataaggctt ttctattcta aattctcctt gaaaaaaagc ttgaaaaaaa ttttcagctt
    15661 catcaacttt aaaatctgtt aaaaaaccta aatgtccagc atgaattcct aaaactgctt
    15721 tatcatattc acaagcttta cggcataaag aaatcaaagt tccatctcca cctaaagaaa
    15781 taacaaaatc ggatatttta aacaaatcat ccaatccata ctttggcaaa tctaaaattt
    15841 cagaactttc tttaagcaat acaagttcaa ctttatatat agataaaatc gattgaagtt
    15901 ttaaaatttc cttatctaaa ctcacattgg gtcgcgtaac aagtccaatt tttttaatat
    15961 ttttataatc tattttattt tgcataaaaa attatatcaa atcttagcaa agcaaaagaa
    16021 taaaaatact ataattttgc tcattatctt aaaaaatctt tttcaaggaa taaatttgcg
    16081 aagtcattat aatacagact tgggaatttc ccatgttggt caaagcgtta aactttgcgg
    16141 ttgggtaaat agctaccgcg atcatggtgg agttattttt atagatttaa gagatagaag
    16201 cggtattatc caacttgttt gcgatccaaa tgatagtaaa gaagctcatg aaatcgcttc
    16261 caatgcaaga aatgaatttg tacttattac agaaggtact attcgtccgc gtggcgaagg
    16321 acttgtaaat cctaagttaa aaacaggaga aatcgaagta gttgtttcta aacttaccat
    16381 agaaaatgaa agtgccgtac ctccttttgc tatcgctgat gaaagtgtaa atgaagaatt
    16441 acgcttaaaa tatcgctttt tagatttaag aaatcctaaa ctttatgaaa attttgcctt
    16501 gcgttctaaa gcttgtatag cagctagaaa ttctttggca aatatgggat ttttagaagt
    16561 tgaaacccct attcttacca aagctactcc cgaaggcgca agagattatc tcgtgccttc
    16621 tcgtgtgcat cagggtgaat tttatgctct tccacaaagc cctcagcttt tcaaacaact
    16681 tttaatgtgt agcggttttg atcgttattt tcaaattgca aaatgtttta gagatgaaga
    16741 tttaagagct gatcgccaac ctgaattcac acaaattgat gttgaaatga gcttttgcga
    16801 acaaaaagat gtgatcaagg tagctgaaac ttttttaaaa gatattttca aagcttgcgg
    16861 caaagaaatt caaacccctt ttagacaaat gcaatacaaa gacgctatgg aaaattatgg
    16921 ctctgataag ccggatttaa gatttgatct taaatttatt gatgtgattg atatttttgc
    16981 taagtcaaat aatgaaattt ttgcaaatat tgccaaagat acaaagaaaa atcgcatcaa
    17041 agccatacgc gttccaaaag gcgatactat tttttcaaaa agacaaatgc aaagatttga
    17101 agaatttgtg cgtaaatttg gcgcccaagg cttagctttc atacaagtta aaaaagatgg
    17161 gcttaaaggt ccactttgta aattctttag cgaagaagat ttaaatgagc taagcaaacg
    17221 ctgtgagctt gaagtaggag atgtggtatt tttcggtgca ggagctaaaa aaaccgtgct
    17281 tgattatatg ggaagattta gaattttctt agccaacgag ttaaaactta tagatccaaa
    17341 tgccttggaa ttcttatggg ttgttgattt tcctatgttt gagcaaaatg atgacggaag
    17401 ttattctgcg atgcaccatc cttttaccat gccaaaaaat attgatgaga ctgatttaga
    17461 agaaatttca tctattgctt atgatgtagt gttaaatggc gttgagctag gtggaggtag
    17521 tataagaatc cataaaaatg atattcaaca aaaagtattt aaacttttaa atatcgatga
    17581 agaacaacaa aaagaaaaat ttggtttctt gcttgatgct ttaagttttg gcgctccacc
    17641 acatggaggc atcgctatag gacttgatag actcatcatg ctagttacag gagcaaacag
    17701 cataagagag gttatagcct ttccaaaaac ccaaagagcg caatgcttaa tgacagatgc
    17761 gccatcgcct gctagcaatg aagcaatgag agaattagga atcaaattaa gggagaatat
    17821 aaaatgaaag aattgttttt aatcataggt gcaccaggta gtggaaaaac taccgatgct
    17881 agtttaatcg cacaagcaga tgcgacaaat atcacacact attcaacagg ggatctttta
    17941 agagctgaag tagcaagcgg gagtgagctt ggaaaaacta tagatagttt tatctccaaa
    18001 ggcaatcttg ttcctttaga tgttgttata aatactatag tttatgctct aaaagctgct
    18061 ccaactaaaa ctatcatcat cgatggctat ccaagaagcg tagaacaaat gatggaattt
    18121 gacaaggttt taagtgagca aaatgaaatt tgtcttaaag gtgtcataga agtaagagta
    18181 agcgaagaag ttgccaaaga aagagtttta ggcagaaatc gtggtgcaga tgataatgaa
    18241 gaagtgtttt ataatagaat gaaagtttat acagaacctt taaatgaaat tttagatttt
    18301 tatcaaaaga aaaaacttca ttttattatc gatggggaac gcactatcga acctatcgtt
    18361 gcagacatga aagaactgat taaaaaaatt caaagtatat aaggagaaaa aatgaattta
    18421 agcaaaatca aaatcggaga tattccaaat aaaatcaatg ccgtaatcga aattccatac
    18481 ggctcaaata tcaaatacga aatcgataaa gatagtggtg ctatcatggt agatcgcgtt
    18541 atggctagtg cgatatttta cccagcaaac tatggtttta ttgccaatac tttggctgat
    18601 gatggtgatc ctgtagatat tttagtgctt aatgaatatc ctatccaagc tggagccgtg
    18661 attccttgcc gcttaatcgg tgttttaatc atggaagatg aaagcggaat ggatgaaaaa
    18721 cttcttgcgg ttccaaattc aaaaatagat gcaagatatg acaatataaa aacttacacg
    18781 gatttaccac aagcaacttt aaataaaatc aaaaatttct ttgaaactta taaaatttta
    18841 gaaccaaata aatgggttaa agtgcaagat ttcaaagatg aaaaagctgc aattgaaatt
    18901 ttagaaaaag caatcaaaaa ctacaaataa tcctagccct tcaaagggct aaactcaagg
    18961 aaaactcgca atgaaaaata tcgttttagg tggtggttgt ttttggtgtg ttgaagccgt
    19021 atttgaacgc ctaaaaggtg taatcaatac tgaagttgga tatagcggag gaaaaccaaa
    19081 tcctagctat gaaagcgtgt gtaatggtga tggcaacata gaagttgtca aaataaatta
    19141 cgatgaaaaa caaatctctc ttcttgaaat cttaacactc ttttttaaaa ttcatgatcc
    19201 aacaagtata gataaacaag gtggagatat tggtatacaa tatcgctcaa taatctttta
    19261 cgaaaatgaa gaagataaaa ttttagctca aaatttcatc gaagaacagc aaaaaatatt
    19321 tagcaaaaaa atagttacta aaatttcaag attgcaaact tattacaaag ctgaaaacta
    19381 tcatcaacat tattttataa ataatcccga tcaaggatat tgtcaagctg taatagctcc
    19441 aaaactgcaa aaaatacaat cagactaatt tcatcttttt aaggttaaaa aaatttcaac
    19501 tttattcaca gccttttcac gctgtgattt tcttttcaaa gtacttaaaa atagaacttt
    19561 aagctttaaa ataaagaaaa aattatttat tgttttttaa gtttttttat gaatttgtat
    19621 ttaaatgtga ataattttat caattaacat aatttcctaa gcttagctat aaaaaatcca
    19681 tcatagtcta agcttggtaa aatccgtctg cattttgaaa tttcagcaaa ttcttcactt
    19741 tgccctgctt tagcctcaac attttccaaa tcaatatcta aaagctctaa tttaaactca
    19801 ctttttaaag cattctctat cacttcttca ttttcttcct tggtaaaggt gcaagtacta
    19861 tatacaagct ctccgcctat ttttaatgcc tttaaagcag aatgtagaag ttttttttga
    19921 gtttttgcaa tatttttgat ttctttataa cttttttcca aatcaaaacc tattttagca
    19981 aaagttgaac aaggtgcatc aagtaagatt ttatcaaatt ttaaagggca taaattgcct
    20041 atatttttac catctttcat aaaaacttta gcattcacgc cgtaattttt aagatttttt
    20101 tgcaaaataa aaaatctatc cctactcatc tcattgcaag ctaaataacc tgtattttgc
    20161 ataaaatttg caagattgat acttttgcca cccggagctg cacacatatc aagaacactt
    20221 tgccctgctt tgacctctaa atttaaagca cacaaataag aagaataatt ttgtatataa
    20281 aagtgcgcct cattaaaagc tttcatagaa cttaagatag ccttatcttt ggcatcaaac
    20341 aaataacaat aaacattgat ctttttaaat tttaaatttt gttttaaaaa ttctttttct
    20401 aattcttcaa tgctagtttt taaagtattt gcaaatacac aaacattttt ttcttgagca
    20461 aaagaagata aaatattttg catttcatct ttggtataaa gtttttctat tctagagagc
    20521 aaaataatcc tttatcatga taaaagcgga taaagagtct aatttaccat cttttttgcg
    20581 tgtattggct acgccgtatc ctaaagcttc tttgcttgtt ccgctttcat ctacaaagca
    20641 aatttcttta tcaaattcaa gcaaagaaac aaaatgctta atgcgtcttg tcatttcttc
    20701 ttcacttgat ccacccttag gaatgcctac aatgagtaaa gaaatttcaa gtattttaag
    20761 taaatttttg atttcattag cggcttgatt gcgatttttt cttaaaactg catctaaagg
    20821 caaagcgatc tttttatcta tgcaaagcgc tacacctatg cgttttaaac ctacatctaa
    20881 agccaaagct ctcatgctaa aacccttata aaaagccctt ctatggaaat ttttccctca
    20941 agttcatatt cataaacttt ttgtccataa atttttaaag cctcatcaac actcacacct
    21001 tttttacaaa actctaaaaa ctcatcttga tttatatcta tacttgcaaa ctcacttaca
    21061 aattctttaa aatcacaaat taactttgat ttattttcct ttaaaagaaa attagttcct
    21121 gtgctttctt ctagtctttg tggtaaaaca tataaaggtt tattgagttc taaagcaagt
    21181 tttgcactct gcatagaacc actttttata tctgcttgtg caaccacaac ggccttgctt
    21241 aaagcaataa ccaaacgatt tcttagtaaa aagtcataat tttttggcaa ataatcatct
    21301 tcgtattcac ttaaagctaa agcattttca taaatttgtt taatgatttt ttcattagtt
    21361 cttggataaa tttgatctaa accattggca aaaataccta tagtatttgg catagctgcc
    21421 atacttgcgg tgatatccac acccaaagca ccgccactta ccacgcaaag atgagcattt
    21481 ttaagcatac tcgctaagga aaaaacacaa tttttcgtat aaacactcat acgccttgaa
    21541 cctataatag cgattttatc ttgttttaat aaagataaat ttcctttata gtgtaatttt
    21601 ttaggaggct tttttaaatc tttaaaaagt tctaaaaatt catcaggcaa aatttcactt
    21661 gccataaatt tcactcaaat acacaagatc aacgcctttt aacaaatcct tactttgctc
    21721 taaagcttta aaagtatttt tcctaggatg tcctatggct ataacaaaac cttttttttg
    21781 tgcaagtttt accgcacttt caagttgttt tttaacataa ttaacatcat cttcattatc
    21841 caaaaacaca tctctttgta tataaggcat actgagttct ttagcgattt tatttgcctt
    21901 agaatttcct atagttttag aatctacaaa aaatatattt tgatttttta aagcctcgta
    21961 aagctttctc atagcttctt cattgcttgt aaataaactt cctgtgtgat tattgatata
    22021 tcttaaatcc ttaaaatctt ttttaatttg cttgattttt ttaaaaattc tttctttgct
    22081 atcatttgga tttaaagtat caatttctgg tttattgtaa ttaattgctg ctaaaggtaa
    22141 atgcaccata taaaaatcaa attttaaagc aagttttggc gtttcgctat ggtttttatc
    22201 tggcggaaaa aaagaaggat ttaactttaa atttaaagct tttaaacctc taacctgact
    22261 tgcatttgcc atatcatcga taataatggc aagttttggt tttttagaaa ttttatttaa
    22321 atgaatatct tcattaaaag ttaaattttg atcttgggtt aaatttgtat cttttagaat
    22381 aaaattttgt tctaaactct gattttgctc taaacttaaa ttctgctcca cactgcttaa
    22441 attttgctca tttaaacttg tatttaaatc atcaatttct tgaatttttt gctctaaaat
    22501 acttacagat ttattattat caaactcatt ctcttgaaaa ataccaattt cataatgatc
    22561 tttatttaat gaaattaaat cttcttgctt atcaataaaa taatccggct taacagaaga
    22621 aacatcttgg gaattttgat attttactaa aattcccaaa gctaaagcta tgcaaagtaa
    22681 aaaaagtata gctatgatta aataacgctg aatttgaact aattttttct ttgacaatgt
    22741 ttagttctta tctttatcta ctaatttttt agcactgatc caaggcatca tagcacgcaa
    22801 attgcgtcct gttttttcta tcaaagaatc attcatattt ttgcgttctg catgcattct
    22861 agcaaaacct gcacggcgtt ctaagataaa atcttttgca aaaacaccat tttgtatatc
    22921 ttttaaaaca cctttcatcg cttttttagt ctcttcagtg ataatctttg gccctgtgat
    22981 gtaatcgccg tattctgcag tatttgaaat agaataacgc atatctgcaa taccaccttg
    23041 ataaatcaaa tccacaatga gtttcatttc atgcaaacac tcaaaataag ccatttcagg
    23101 ttcataacct gcttcaacca aagtttcaaa acctgcttga atcaaagcac taagtccacc
    23161 acaaagcaca gcttgctcac caaaaagatc tgtttctgtt tcggctttaa aggttgtttc
    23221 tataatacct gtacgtccac ccccgatcgc acttgcataa cttaaggcta aatttttagc
    23281 atttttgctt tcatcttgat ggatagctat taaacaagga gtgccaccac ctagagtaaa
    23341 ttcatttctt actgtatgac ctggtgcttt aggtgctatc atgataacat ctacaccttt
    23401 tggaacaaca atttgaccat aatggatatt aaaaccgtgt gcaaaagcta tagccttgcc
    23461 ttcacttaaa tttggtttta tttcgacatt aaaaatatct gcttgaattt catcaggagc
    23521 taaaatcata atcacatccg ctatcttaga agcctcactc acactcacca cttcaaaacc
    23581 agcatttttt gctttaacag cacttacact accttcacga agtccgatag ttacatttac
    23641 gccattatct cttaaattca tcgcatgagc gtgcccttga gagccaaagc ctataattgc
    23701 tacttttttt gatttgatta aatttaaatc acaatcttta tcataatata ctgtaatagc
    23761 catattcact ccttaaaaat tcaaaaatta aaggtattat tatagcaatt aaagtataaa
    23821 tttcatattt tttttataaa ctttatgtaa gaattttaca aaaaatcata aagtatcaaa
    23881 agtgaaagaa tttttaaaca gtcttagtta tggcattagc tctcacgaag taaacaatga
    23941 atttaaacaa attttcagag aacttttaac taatcatatc attaaagaac acaaaaacaa
    24001 atactatctt aacaatggtt ttgcctttgg agtacttgat atttcgagta aaggcacagg
    24061 ttttttacaa tgctttgatg aaagtttcaa aaaagatctt ttgatagaaa acaaaaacct
    24121 aaaaggcgca aactataaag atatagtcgc agtaaaactt ctacctttaa agaaaaaacg
    24181 ccccagtgca aaggtgattt tggttctaaa aagagccaat gaaacctctt taatgatcac
    24241 caaaaggtat ggccaagccg tgcttggaat gaatatcaaa acaggattaa gcactgcctt
    24301 aaaagcttct caaaaatcct taaaagcact gcctttaggg acaattttaa aaatagaaaa
    24361 tgaaaataac aatatcatag aagttttagg acatatcgat gatgaaagcg tagatgaaaa
    24421 aatctcctta gctcttttta ataaaaataa cgaatttagc gacgcttgca tcaaagaagc
    24481 tctagcaaac ggcgatagtg ttgatgcgag tatgtatgaa aatcgcatgg atttaagagc
    24541 cttgcctttt tgcaccatag atcctataca tgcaaaagat tttgatgatg cgatttattt
    24601 tgacactcaa aaacgagaaa tttatgtagc tattgctgat gttagcgaat atgtttatgc
    24661 ttatagtgct atagataaag aagcaagaaa tcgtggattt tctatttatt ttccacatat
    24721 tgctatacct atgctacctc gtcctttaag tgaaaatatc tgttctttaa aacctcattt
    24781 agatcgctta gcgtattgtt ttaaaatcac actcaatcat gaaaataaag tcataaaaga
    24841 agaacttttt gaaggtatta tcaactcaaa acgccgtttt aattatgatg aagttgatga
    24901 aattttaata caaaaacctg atttaaaaga gctttcatgg ctttatgagc tttttgaaat
    24961 cacaaaaaat ttacgcaaaa tgcgtcttaa aaatgccttt gaatttcgca ccgaagaatt
    25021 aagaatgaat ttagatgaaa atttaagtct aaaaagtaca gtttttgaaa aagacacgcc
    25081 ttcgcataat ttgatcgaag attgtatgct tttagccaat aaagccgcag caaaactcat
    25141 agatataggt gtttttagaa atcacttaag tgctgatgta agaaaaatcg ataagctttt
    25201 aaatgaatta cgcgaattag gcatcgatgt aaattttaag cccaatcttc ctgagctcat
    25261 acgcgacata caagctttag ctgatgagtt aaatttaaga gcagaagtag ataaactcat
    25321 catcaaagca caaaaaaaag cggaatattc tagcgtcaat gcgggacatt ttggcttagg
    25381 ttttgataaa tactcacatt ttacaagccc tataagaagg tattctgatc ttattttgca
    25441 cagactttta aaagccaagc aaaaaaacga tgaaaaactt tttaattatc tacttttaaa
    25501 catagaaagc acttgtgaga atcttagcac acttgaaaga gaggcggata aggttgcttt
    25561 tgattttatg gatagaaaat ttgctagatg ggcagctaaa aatataggca aaaaatttaa
    25621 agctttagtt gtccaaaatg atggagtttg catagccaaa ctagatgatg aaatcaaagg
    25681 agcggatata atcctttatg atacgcgtgt aaatttgcta gaaaatgttg aagtacaaat
    25741 catggaagcg gatatagtta tggcaaaaat ttatgctaaa atcacccaaa gacttataaa
    25801 ggaagaaaat gtatagaaaa gagcttcaaa tcttactttc taaagattca atacctaatt
    25861 ttttctttct ttatggagca gataattttc aaagcgaact ttatgctgaa tttataaaag
    25921 aaaaatataa gcccgatgaa actttgaaac ttttttttga agaatacaac ttcactcgtg
    25981 cgagtgattt tttaagcgca ggatcgcttt ttagcgaaaa aaaattacta gaaatcaaaa
    26041 cttctaaaaa aattccaaca aaagatctta aagttttagt agatctttgt aaaaacaatg
    26101 cggacaattt ctttctttta gagctttatg atgaaagttc taaacaaagc gatatagaaa
    26161 aaattttctc tcctcatttt gtaagatttt tcaaagctaa cggagctaaa gaaggcgtgg
    26221 aacttttaag cataaaagca aaacaactag gggttgaaat cactcaaaat gctttattta
    26281 ctctttttac aagttttgat gaaaacttat atcttgctgc gagtgagctt aataaattta
    26341 gtggtttaag agtagatgaa aaaaccatag aacaatactg ctatagtttg aatacaggaa
    26401 gttttgaaag cttttttgag aaaattttaa aaaaacaaga ctttaaaagc gaacttgaaa
    26461 aaattttaga taattttaat gaaattgctt taatcaactc tttgtataat tctttttatc
    26521 gtttgtttaa aatcgcactt tatgctaaag tcaatggtaa aattgacttt aaagatcttt
    26581 taggctatac tccacctcct caagtgggac aaaatttaag ctctcaagcc tttagtttaa
    26641 aaatcgaaca atataaagaa attttcactc ttttgcttaa aagcgaatac gagcttaaaa
    26701 ccaattctaa gctcgtaaaa aaagaatttt tgatttcaaa tttgcttaaa cttgcaagga
    26761 ttttgaaaag ctaaatagta aaattataaa aattaaaatc acttttttta ttataaaact
    26821 aaaaaatgtt gctataatac ttttaataaa aacaaaagga atgaaaatgg attttgaaaa
    26881 tcaattaaat gctatcgttg aaacaatagc tgaacgcaaa acacttgtca atactgaaga
    26941 agctacaaaa atgactttta taatgccttt tttaaaaaca ttaggttatg atgtttttaa
    27001 ccctagtatt gttgtgccag aatatacagc agatatagga actaaaaaag gcgaaaaagt
    27061 ggattatgct attttcaaag attcaaaacc ttttatttta attgaagcta aaaatcatac
    27121 tgaaaattta gataatcata acaatcagct tgtaagatat tttaacacta atcctagtat
    27181 taaatttgcc attcttacca atggtattga atatagattt tttacagata ttgaacaaca
    27241 aaatcttatg gataaaatac catttttagt tgttaatctt gaaaaactta aacctagaga
    27301 tattaaagat ctaaaacgtt ttatttgcac tgacttaaac ttagatgaaa ttctaagcat
    27361 tgctatggag aaaaaatatt accgaagtat acaagaaatt tttaaaagtg aaatagaaaa
    27421 tccaagcgat gaatttacaa gtttttttgc taaacaaatg acagaaaaaa gaatgactag
    27481 tgctgtttta gaagaattca aaaattacat taaaaaatct tttaaagaaa ttattaatga
    27541 tttagcttat gaaaaaatca caagcattaa aaacaatctt caaaacataa acgatgatga
    27601 aaatgatgag caaattgatg aaagtaaaga tattgtcaca acagaagaag aattacaagg
    27661 tttctatata gtaaaatcaa ttcttgctag tgtcagcgcc aatcttgaag atgtaagtta
    27721 caaagatact ttaagctatt ttagtatttt atatcaaggc aaagttacta agtggatatg
    27781 tagattatat tttaatacaa gcaaaaaatc tattagtttt ccggatggag caagttataa
    27841 tatagaaaaa ttagaagata tttatcaata taaagcagat attatcaaag catttgaaag
    27901 cagaaagtaa aatcatttat tgattttact ttcactccat cacaagtcgc ataagatgta
    27961 agtcctcacc ttgtgtgatt ttatattcta tactttgaca tttaggacac ttaaaaacat
    28021 tttcttctaa aatacttgtt tgatcgcatt ttaagcataa aatttcaagc ggagcaagtt
    28081 ctataaaaag tttagcattt ttacaaatat ttgagttttc tttaaaagtt tcaaaacaac
    28141 gcttaaaaag atcaacttct ataccgctta aacgcccgat ttttacataa atttcttgca
    28201 cattacaagc cttattgttt aaggcatttt cttcacaaag ttcgattaaa gattctacta
    28261 tacttaattc gtgcattagc aaattcttgg taaaagttcg cctttagggc tttctaaaaa
    28321 gcgttttgct ccataagcgt tttgtaagat cacgcgtgct tttttctctt ctaaaacttc
    28381 tcctataata ctcgcattta cattgtattt ttttagaatt tccaaggctt ttaacccatc
    28441 ttctttttcc acacaaagta taaaagtgcc ttcatttgca agctcatagg cttcataacc
    28501 aaaaagctcg caaagtccta aaacctcatc ttgaacgatg attttttctt caaagatcaa
    28561 aagatcattt ccactttgct ttgcccactc atttaaaacc gcactaagtc ccccacgagt
    28621 agcatctctc attgctacaa cctttatatc tttttctaaa agctctaaaa cctctttatc
    28681 taaagcctta caatcacttt taacattagc ttctaactca tttcttttga ttaaaacact
    28741 agctccatgc cttcctatat cacctgaaag aagtatgcta agccctgctt tgatattttt
    28801 actttctttt ttagaaataa tttcacctaa ggctgtagtg ttgatataaa tttcatctgc
    28861 tttaccctta ggaacaactt tagtatcgcc acaaactaac ataactccac atttttcaca
    28921 ttcttcttta atgcttttta aaatgcgttc tagtttttct agctcaaaac cttcttctaa
    28981 gataagccct aagcttagat attttggctt agcacccacc atcaaaacat cattaataga
    29041 accacaaaca caaagtttac ctatattaac ctcttcatct aaaaaaatcg gacttaaaac
    29101 aaaagaatcc gtgcttaaag ccaaatttcc caaaatcgct gcatcattat ttgcgtttaa
    29161 aatttcatta tcaaagatct taaaaagctt agttaaaagc tcattcatct cttctccacc
    29221 gcctccgtgg gctaaggaaa tatttttcat gcattcacct ttgagtattt ataatacgcc
    29281 gcacaagcac cctcgccaga aaccatacaa cttcctatag gacttcttgg cgtacaagcc
    29341 ttgccaaaaa ctttacaatc ataaggcttg gccaaacctc ttaaaatttg cccacaaata
    29401 caggctttgc tttcattttt gctttgcacc gcgcaatcga attttttact cgcatcataa
    29461 gcgctaaatt cttcttttaa ctccaagcct ccatctttaa taagtcctaa gccacgaaat
    29521 tcaaaatcac acaccttaaa gtattttttt actaaatttt gtgctttaac attaccttct
    29581 ttacttacgg ctcttttgta ttgattatac actttaaaag tgccttcatt gctttgtttt
    29641 atgatattta acacactttc taaaatatca actggttcaa aaccactcac cgctataggg
    29701 gttttaaact ttgctgctaa aggctcataa ataccataac ctgtaatcac actcacatga
    29761 gaaggaccta aaaaagcatt gatttttaca ttttcatcat tcatgatcgc ttctacaggt
    29821 gctggaactg tgatatgatt gatatggaaa aagacattat ttattttctc ttctataagc
    29881 ttttgaagaa gtaaagcact cataggcgta gtggtttcaa aacctatagc aaaaaagatg
    29941 atatttttgt ttaaattttg cttagcaatt tccaaaacct caagcggaga ataaagcgct
    30001 ctaacatcag cccctttagc tcttaaatcc agtaaagaaa tttcacttcc aggcaccctt
    30061 aaaagatctc ctaaagtaca aaaaatcgta tctttcatag aggctaactt gatagctgta
    30121 tcaatgcgaa ctcttggcat aacacaaaca ggacatcctg gcccatggat gaagttaatt
    30181 tcctttggca aaatagaagg cagggcatat ttcatgatgc tatgcgtatg cccaccgcaa
    30241 atttccatga tgttgatagg atttttaagt tcttgttcta tgagtttttt taaagctaaa
    30301 atgctttttt tatctctaaa ttcatcgatg aaattcattt aaacctaaat ccccctcatc
    30361 actttttatc tctccactat tcattttttc tactatttct tgataggttt taatgctttc
    30421 tagtgcagct tctttgtcga ttttttccat ggcaacgcct acatggatta agacataatc
    30481 gccttgtttt aaaggctcat caatcaaatc taaattcact tttcttttca cgcctaaagt
    30541 ttgcactaaa gcattgttta actcatcgat ttctaaaatt tcagaaggta tagacaaaca
    30601 cattaaaaaa gctccttttt aagtttaagc accttatacc aaagctccat attggtgtca
    30661 ttttttgcat caagggtgat aatatctgct ctaggattta attctttaat caacctagtc
    30721 gcctctttaa catcaaaatc aaaatgatga gctaaatctg cctttgtgat taaaactata
    30781 tcagcctttt taaacatcac agggtatttt tgcggtttat cacttccttc agttaccgaa
    30841 agcaaaacca catttaaatg ctctcctaaa tcataacttg caggacagac taaatttcca
    30901 acattttcta taaaaagcaa atccacatca tcaatggcta aatgatgcaa agcctcatgc
    30961 accataaaag cgtccaaatg acagctttgc cctgtagtga tttgatacgc taaagctcca
    31021 gcatttttta ctcttatagc gtcattattg gtttccaaat ccccttcaat cacagcgatt
    31081 ttaagctcat ttttcaaagc cttgatcgtg ctttctaaaa gcgtagtttt tccactacct
    31141 ggagaactca ttaaattgat acaaagcgtg ttggtttcat taaaatgtgc cctattgtgc
    31201 ttagcttctt catcattttt gcttaaaatt ttagaaatca cttctatggt tttactttct
    31261 tttaagcttg gattttcatg gtggtgatca tgatgatgat catgcgtatg gcttgaattt
    31321 atagaacagc cgcaatcttt acacattttc tttcctttat attttttgtt tcattttaac
    31381 cttaaaagca ttaaaaaatt atgagttttt agaatatttg ctttattttt ctaaatttaa
    31441 aaaatgtacc atttgtccta aggctatgga gctatcattg caaggatatt ttaaaggtac
    31501 aaaaaaatca aaatttttag cttttaaaat ttcaagcaag gttttgtttt gaaaaactcc
    31561 tccacttaaa agcactttta aatcataatc tttgctaaaa tctatgataa aatttgctaa
    31621 ggcattaaac atacctgtaa ttgccttagt tttttcatct tgcaaagccc ctaggattaa
    31681 atttttaaaa ttaacctgcc ctttttctac aaaaagctta taagaaaaat caagattttt
    31741 atcataaaaa gcttcacaca ttaagccaac ttgagcttca taagaacttt tttctaagtt
    31801 aaaaacaata cttccaaaag catcgataat gcgtcctaaa gaacttgttt gtaagttaga
    31861 atgagaataa atttttttaa gatttttaag tttaattttt ggaatttttg ctaaaaaatc
    31921 cttagcctta tcttctaaat cataatgaaa aataagactt agagccaaat tttgtatatt
    31981 tttaatatca ctatttataa gagtgaaatt ttcaaaatgt gcaattcttt catattcttt
    32041 taaatttcct acaaaaactt ctccacccca aattttacca tcttcgccat aacctgttcc
    32101 atcacaaata aaagctaaag ccttttcatc ttttgcaaaa ttttcttcgt attcaaaata
    32161 agccgcacaa aaatgcgcat aatgatgaga aattttaatc ctttcttcaa attcttttgc
    32221 atagctaaaa tgcgggtgtt tatcgcacaa aatcgcatca aatttcaaat cataattttg
    32281 tttaaaaaat tctaaaagtt taaaaaatct ctcatgcaca tcaagacttt tcaaatcccc
    32341 tatataagga gaaattaaaa gtttattttc ataaaaaatc acaaattcat ttttaagttc
    32401 cgcacccaaa gctaaaaaag tgcctttttt attaaaattt ctttccaaat aaaagggatt
    32461 taaacccctt gaagtgcgta aaaacatagt tttgccattt accacttgag ctatgctgtc
    32521 atcacttgca ttgataattt ccctatcata atccaaataa aaatcaaaaa ctttatcaag
    32581 tttttgacgc aaattaaact catctttaat gatactttct ccgcttaaat ttgcactcgt
    32641 tgctacaagg cttcctttaa aatactcaaa aagcaaaaga tgtaaaggtg tataagctaa
    32701 cataatgccg attttatcaa catcaggagc gattaaagaa aaggcttttt ttgcctttaa
    32761 aatcacaata ggagctaaaa ccccaccaag caaagcttct tctttttcat ctataaaggc
    32821 aagttcttta gcactttgta aatctttaca catcaaagca aaaggttttt tagggcgatt
    32881 ttttctaagt cttagagttt ttaaagcttc ttcattaaaa gcatcacaca tgagatgaaa
    32941 accgcccatg cctttaatgg ctaaaatttt accttccttt aaaaacttcg cactttgtat
    33001 aaaagcttct tgatctttgg ctaaaatttc accctttgga tttttaagaa aaacattgat
    33061 tttacactta ggacaactaa taggctgggc atgaaaacgc ctatttttag gatcttcgta
    33121 ttcgctttta caaaactcac acatcaataa ttcttgcatg gaagtatggg ctctatcata
    33181 aggaagactt tttataatac taaagcgtgg cccacaatgt gtgcaagtga taaagggata
    33241 caaaaagcgt ggattttttt catcaaaaaa ttctttttta cactccttac aaagcgcaaa
    33301 atcgcttaac ataggcgtgc tttttgtatt ctctaaagaa ggagtaatgc taaaattttc
    33361 atagtttgaa atagaaattt gcgtgattat aagctgatct attcttgcta aaggcgggag
    33421 atgatttttt aaattttcta tgaaattttc acattctttt tgagtgcaag caaggatgat
    33481 ttctacccca aaaccatcat ttcttacttc tccaaaaagc tttgatttca aagctagttc
    33541 ataaactaag gggcgaaaac ccaccccttg aactagacct gaaattttga tcttatatcc
    33601 taagtggcac atcgcttaac tgacaatttt taagatgttt taaagtattt ttaagtaaag
    33661 atttatgttc aaacaaagag ccgcttataa gcgctaagtc gctttgcttt ttctctctta
    33721 attcatcata agtatcacgc aagaaataag ccaaactctc aaccgctcca taagcgatat
    33781 tagcactatc cacacctgct aacataaaac tcatagcaga tcttaaagtt cttgtataat
    33841 caaaactttt atcttctttc aaacgataat caatctttac tccacgaggc atttttgact
    33901 catcagcgat ttttaaaagc tcgctaacac tctcttgtaa atttttaccc aaatttagca
    33961 ctcttcctac taagccaaac aaggaataaa aattgttttg aagctcaaaa ttttcatcta
    34021 aaagaggaaa ttccttgcta aaattttcta aaagccttgc accaatttca tcttttttga
    34081 tctcttcata aagctctttg ctgtgttttg gtaagcaaag tttaagcaaa ttaagctctt
    34141 tgttgataag caaaatatct tcatcatctt tacttagctc taaaataaaa gccttttctt
    34201 tataacggct tacaagataa gaaattcttg ccatattttt atcttcttta gaaaaaataa
    34261 gctctcttgc cttagcattg ataaattcaa agccttccaa aaccaccact tgctcatcta
    34321 aagcactgat ataaaaatct ttttgatatt cttctatctt ttttacgctt aaaaatttat
    34381 attcattttc aaaaagtttt aaacctaaag caaaacaaaa caaatcccta gcaagtctga
    34441 ttttaaaatc attaaaatca agattgtgat tttttctaaa tatggcatta agccttagct
    34501 tcatcaaagg tttttccaaa cttgcaagaa gttttaaatt ttcatttgaa caaacaaaaa
    34561 ctgaatttat agctttaata tcacaaggaa gtaaaaaatc tcctataaat tcgttcttaa
    34621 acaaagaaaa ttcataaatg ccatttttat cttttaaata aatctttttt tcttgactta
    34681 acaaatcaaa agcaagattt aaaaaagtat tgaaattttc ttcattgatt ttttcaaatt
    34741 ctgataaatt gcttgaaaat tcacactcac aaaacacacc ccattcattt ttgtttaaaa
    34801 gttttttttc ttgataggca ttagaattta aatgagtaat ataagaaaat tttgaaaatt
    34861 ctttatcttc tggtatacaa gggttaaaat cttgtcccgc ttttacatca aattttttca
    34921 aaaaaacgct atgactcatt aaattcaaag aatcacaaaa agtctttaaa ttttcttcat
    34981 ctgcatcgat agaaaaatga taagtatttt cttctttact aagggtgtaa ttataatttt
    35041 tcgcataaaa acgcaataaa tattcaaaaa tatcattatc cgcattataa ataaaatcaa
    35101 aatccaaagt catattatgc cttttttgaa aaataaacta taaatataac atttttaact
    35161 taaaaattct ttctctcttt gcctaaaatc actcataaaa tactcaataa aatcgtaaaa
    35221 ttctttgctg tgattaggga attttaagtg gcatatttca tgcaaaatca catattcaat
    35281 agcccttaaa ctcttttgaa tgagttttaa atttaaatta atataagctt tattgtgatt
    35341 acatgaaccc caacgcgttt tcatattttt aatgcttaag tgcgtgtaaa ataaacctgt
    35401 tttttgactc cattttttaa gataaaaagt aaaaatcttt ttagcatttt gtcttaaaaa
    35461 taaatctaat tttgctttat tttgacaaat tattttatct ttatcaaaat aagttttttt
    35521 gacattttca tcaaaaataa ttttatattt tttagctaaa aagattaact catcatcttt
    35581 taaaactttt ttttcaaatc ttttttttgc ctcattcatc caagaacttg atttatctaa
    35641 aaactcataa acacttttaa aggtgcaaaa ataaggaatg ctaagaacaa attcacccct
    35701 ttcattgatc cttaatctta aagtttttat gcgtttttta gaataaaaat agcactcatc
    35761 tttataaata aaagatttta aactagagct ttgccttgcc attttttact tttccatctg
    35821 tatgaattta ccattccacg caaaaactca tccgcacaaa atcctatcca aacccctaaa
    35881 attccaagat taaaatgaaa acaaagcaca taacccacag gtaaagatac ccccatcata
    35941 aaaacaagtc cactaaaaaa tggaaactta gcatcgccac ttgcgcgcaa ggaattaacc
    36001 atgactatat taaaagtgcg tgaaatttca agaaagattg aaagagcaaa taaaggtatc
    36061 attaaatttt ttaactcttc tttaagccct aaaatttgca tagtaaaatc ttgacaaaga
    36121 tagttcaaaa gcgctactaa agcactcgct attacgctaa aatataaagc acgccaagca
    36181 tgtttataag cgatattttc atatctagca ccgactaatt tacctactat aatttcatta
    36241 gctatgctcg tagcttgtcc tataagcatg ataagcattg aaatttgaaa ataaatcgtt
    36301 tgtacactca agcttgcttc acctaagctt gctacaaaag caaaggctat agtgtattgg
    36361 actatccaca aaagattttc ccctgctgaa aatccgccta tatttaaaac cttttttaat
    36421 acctcttttt caagttttat catttctttg attttaagat gaattttaag tttataaaaa
    36481 agtatcacaa gtaaagccac tatagcaaca atacgggcaa aaatattact aagccctact
    36541 ccaaaaagtt ctgattttgt ataatgcaaa acataataat ttccacaaat caccactata
    36601 tccatcaaaa aacctataag catgacccaa taagccatat tataaaccct tacaatagca
    36661 gctaaaacaa ttcctatggc atcaaaaaac aaacaaattg caagcatatg taagtaaatt
    36721 tcgctatctt tgagcaattc ttgtgggatt tttaaaagat aaagcaaata ctccccgtgc
    36781 cataaaataa gcacaccgca tacaaagcct aaaagtgcat ttaagaacaa actttgatga
    36841 atcacttttc ttgctaaaac atgatctttt gcaccaattg cttgtgcgat caccacacta
    36901 caacccacac ttaaaaatga aaaaatagtg ataaaaagat ctaaaatttg atttccagcc
    36961 cccatagcac cgacaagaaa attagaataa tgcgacacca tagcggtatt gataatcacg
    37021 gttaaatact tagaaagcaa atcccaaaat ataggaaaac taagtcttgt taaagagagt
    37081 tgtttttttg ccatgatatt atcttatctc tttttttaaa tatttctttt aaaaaacaat
    37141 tctacttaaa
//
LOCUS       DAPIVO010000009        32028 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.009, whole genome shotgun sequence.
ACCESSION   DAPIVO010000009 DAPIVO010000000
VERSION     DAPIVO010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 32028)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32028)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32028
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.009"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..336
                     /locus_tag="RJ239_000448"
     CDS             <1..336
                     /locus_tag="RJ239_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2972 domain-containing protein"
                     /protein_id="HDV7330591.1"
                     /translation="ILDMDSSVGFYIDKQDYNKLKNDSIFYKQVIDYLRNFAYELKNR
                     IQIEEDLMLKVEDVLRHLYNNKNARVSAKNILDEELVYIKQHRPDIVASWKYYQEFEK
                     MCKELDGDI"
     gene            403..1176
                     /locus_tag="RJ239_000449"
     CDS             403..1176
                     /locus_tag="RJ239_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDV7330592.1"
                     /translation="MKQGDFTKVAKHYHNRPAYSPFLLEKLVACINDKNKNLKDLNIV
                     EVGAGTGKLTKMLGEMFGCQISAVEPNDNMREEGQKFTQNLSNISWHKGSGEETCMSN
                     NQADWVIMASSFHWTDPKKSLPEFNRILTGGGYFTAIWNPRHIVEGSVFDEIEKEIKH
                     IVPDLARVSSGTQNVKKWEEILVSTGDFIDCFFMECDYKEFWDKERYLGAWHSVNDIQ
                     AQAGEKRWKEILEMIEAKISHMQSIEIPYKIRAWTARKA"
     gene            1229..1990
                     /locus_tag="RJ239_000450"
     CDS             1229..1990
                     /locus_tag="RJ239_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDV7330593.1"
                     /translation="MQKLVEQVWDYTKHAKFYSYRPNYAPKTIDMLISLVGKKDIKVA
                     DIGAGTGNLSIMLLERGCKVVSVEPNDAMREIGIERTKDQKIDWVRATGLNSTLQNSE
                     FDWVTFGSSFNVMDRNEALEEAHRLLKSEGYFSCMWNHRDLNDPVQKIAEDTIVEFVP
                     NYTRGTRREDQRPIIESRKDLFDNIVYIEEDFYFHQSIENYINAWKSVKNPYWDLETD
                     EGNELFNKISNKISQRLPKEFSIKYTTRCWSAKKI"
     gene            2005..4344
                     /locus_tag="RJ239_000451"
     CDS             2005..4344
                     /locus_tag="RJ239_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330594.1"
                     /translation="MAELKFKTKAQNLKNLQTKLKKAKVLPLVLTSLEELISNEDKVL
                     QDIQTLKANRLIIRSSSLSEDSMKNSNAGAFLSLANIKADSKDELLKALYEVANSMPS
                     KSDEILVQPMLENITLCGVGFSVDKDNFSPYFCLQYDENGSNSSITDGSSKSAKTYYH
                     YRNYLEFKDIRLQKIIELIKELEVLYDCHFLDVEFAFAIQDDKEELFCLQVRPLVMHE
                     KNNLFHSLPKEALYRFYKRFESLKESRSRVLGDKAIFGVMPDWNPAEIIGLRPKRLAF
                     SLYKEIITDNIWAYQRDNYGYRDLRSHPLIHSFLGIPYVDVRLSFNSFIPKKLDENIA
                     QKLVNFYLDKLNKNHELHDKIEFNIVYSCYDFNSSKKLEELLNHGFNENEIKRLEFSL
                     LELTNKIINPRSGFYLKDIQKAYKLKERYDGIINSNFSLIDKIYWLIEECKRYGTLPF
                     AGVARAAFVAMQLLNSLVEIDFITKEEKDDFLNSLNTVSKNLSKQTNHLNFHNKDQFL
                     KDFGHLRAGTYNILSPRYDEDFELYFDADQKDSKVYLQDKAFVFSEEKTRALNALLKE
                     HGLEINACEFFDFLKQAIEGRELVKFEFTRLLSKAIVYIEELGKYYDIEKEDLAHLDI
                     KSILNLYSSLYSINPKEQFIEEINRNKKEYELTQAIKLPSLLCNADEIFSFYNHSIIP
                     NFITQKSIAAFTAKENDKDLEGKIVLIYAADPGYDYLFTKNIAGLITCYGGANSHMAI
                     RASELGMPAVIGVGEENFEKYLKAKKINIECESEQIFCL"
     gene            4335..4937
                     /locus_tag="RJ239_000452"
     CDS             4335..4937
                     /locus_tag="RJ239_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HDV7330595.1"
                     /translation="MFIGITQRLICNDSYHEKRECLALDWGKLFNKDLFKNFTPLPLS
                     YEIDFSYYKHLIKAVILSGGNDLSFYSPNVLSKKRDLYEKQVIEICLEEKIPLLGICR
                     GAQMIAHYFNSHISPCENHIGKHEVFFSKEKFISNSFHNFAIEKLGEDLVELCLAKDN
                     TIEAFKHKYENIFGIMWHIERENGLNNIQILKEWFSLIKE"
     gene            4939..5700
                     /locus_tag="RJ239_000453"
     CDS             4939..5700
                     /locus_tag="RJ239_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP:phosphoglutamine cytidylyltransferase"
                     /protein_id="HDV7330596.1"
                     /translation="MNAIILAAGFGSRLMPLTKDQPKCMVEYKNKKIIDYEIEALKSA
                     GINEIAVVGGYLNDVLKNYLNKYDIEHFFINSKYDKTNMVHTFFCAKDFMLKCIEEKQ
                     DLIISYADIVYFQDCVQKLINAKEELAIVVDKSWCKLWSKRFANPLEDAETLKMTNGY
                     IIELGKKANAYDEIEAQYIGLFKFSYQFLSEVIAFYEMLDRDILYDNKNFENMYMTSF
                     LQALIEKYNNAKAVEIDGNWCEIDFMSDLEVQIEK"
     gene            5690..6202
                     /locus_tag="RJ239_000454"
     CDS             5690..6202
                     /locus_tag="RJ239_000454"
                     /EC_number="2.7.1.224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine diphosphoramidate kinase"
                     /protein_id="HDV7330597.1"
                     /translation="MKNNPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYLDGDEL
                     REILGHYAYDRQGRIDMALKRAKFAKFLNDQGMMVIVTTISMFNEIYDYNRKQLKNYY
                     EIYIECDMHELIQRDQKGLYTKALNKEIDNVVGVDIEFDKPEADLVINNSCRNNLEEK
                     VELIIKKLAL"
     gene            6199..8268
                     /locus_tag="RJ239_000455"
     CDS             6199..8268
                     /locus_tag="RJ239_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HDV7330598.1"
                     /translation="MKYYSISKKLIANVRNFYTISLYKKNLKIKKDDLFFGWGRKKSG
                     LKAMNLAKKYKAKFILLEDGFIRSLNLGVENSPSFSMVKDDIGIYYDATMPSKLENLL
                     NTCEFKDEEIKQAKKAIELIKKYKISKYNNNLDIPDNYFQKDEKRVLIITQTANDASL
                     EFGLAKDFKTLDMIKDAIKENPKSTIYIKIHPDVLSGKKQSDLDLNSLPKECILITEN
                     FNPIALLEFFDKVYTKTSGMGFEALMQECECICYGMPFYAGWGLTKDKLECKRRMQKR
                     SLEEVFYAAYILYAEYFNPYLNQKSNIFDTIQTLAKYKDIEKVNSNKLFMLGFTLWKR
                     HFIKPFFKAKDNEIIFLNSLKSLARYKLKENDKFFIWGKRIDYNALKTTLIKKAQDEN
                     LLHFTPKISLVEDGFIRSISLGSDLTRPFSLIVDDKGLYIDPNKASKLEELLQNEIFD
                     ENMLNRAKNIIKILLENRFSKYNGLKHEDLKINVKTGQKIILIPAQVEDDASMILGGF
                     GLSTLDLLKEVRSKNQDAYIIFKPHPDVLSGNRVGLKDETLILEFCDEIVKDCSIDSA
                     IKIADEIHTITSTSGFDALLRAKKVFTYGMPFYAGWGLTKDKYRCERRTRKLSLEELV
                     AGALIAYPRYINPKTKTLCEIEVCLDIMLNLQKAYFSKKYIKLAIDFKTFMLRKIRRF
                     YEFLAKK"
     gene            8265..9449
                     /gene="kpsS"
                     /locus_tag="RJ239_000456"
     CDS             8265..9449
                     /gene="kpsS"
                     /locus_tag="RJ239_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide modification protein
                     KpsS"
                     /protein_id="HDV7330599.1"
                     /translation="MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAIKMKKKQTKVFKL
                     NFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKIDAILMYNDCRIIHTKAIKVAKE
                     LGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
                     MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIY
                     NLEKKYFLAILQVYSDTQIKYHYKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRG
                     YKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINSTVGLSAILEGCPTK
                     VCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFL
                     DK"
     gene            9522..10643
                     /locus_tag="RJ239_000457"
     CDS             9522..10643
                     /locus_tag="RJ239_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF829 domain-containing protein"
                     /protein_id="HDV7330600.1"
                     /translation="MDREVFYIAGYDPKSYRFYYDLFKKNLKDYSHAFNIKVDLSKIE
                     KNEQFPFFQISCEGVQTTYHFLTWNDIVKKNWSENYKDALADCYSFFRIYTITGLFIK
                     FGKESIYQLITGYYPFFYVLFSLLFSLVVAFGSFAFLQNYMHFSLAIIIGCFLGFLLN
                     HFLFKLGKKLAVFWIARICAFCATWQDKKTGTMQERIKLFANTIVDKLKQNENKQDYE
                     LVLVAHSVGTIVCIEVLECILRQNLDLSLLHKLKILTLGECIPLVSYQKKADEFRKKL
                     EFVSRFDLKWYDYTSIIDGACFPQVDFFRTSGVNAKFTPPFLSAKFHTLYEKHEYKKI
                     KRDKNKAHFLYLYSISVKGDYDFFSFIIMPKFLEEKVKI"
     gene            10640..12001
                     /locus_tag="RJ239_000458"
     CDS             10640..12001
                     /locus_tag="RJ239_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HDV7330601.1"
                     /translation="MSECPFFPKPYKNKASTLLTFLLKRRSWLDGLYERSYKMQTGYV
                     KMPNFDLYVINDTKEVKRMMVDEVREFPKSAFLHELLSPLLGESIFTTNGEVWKKQRE
                     LLRPSFEMTRINKVFNLMSEAVADMMDRFSKYPNHAVIEVDEAMTFITADVIFRTIMS
                     SKLDEEKGKKILNAFVTFQEQSVHTAMRRMFRFPKWLSYVLGDRKRAKAGDVIRQVLS
                     DIIKPRYDMADNAEFEDILGSLLLVVDADTNKRFSFEEILDQVAMLFLAGHETTASSL
                     TWTLYLLSLYPKEQEKAYEEITQVLQGGAIEISHLRQFKYLTNIFKESLRLYPPVGFF
                     AREAKKDTQVRDKLIKKGSGVVIAPWLIHRHEEFWTNPHGFNPSRFEGEYKKDAYLPF
                     GVGERICIGQGFAMQEAILILANILKTYKLELEEGFVPDVVGRLTVRSANGMRIKFSK
                     RKL"
     gene            11998..12417
                     /locus_tag="RJ239_000459"
     CDS             11998..12417
                     /locus_tag="RJ239_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330602.1"
                     /translation="MKRVRTKIRANFRRRVKRTLKGSLKEKLAGTILLCAIVPLAVLG
                     YLFIVIIGTFFNTARARQGVRALDHFVNASLFNGYAWESVSSHAWRERNRKKWARIVI
                     KITDFFQKDHCKRANKREQPVVDFIISRNLDKQTIGK"
     gene            complement(12418..12765)
                     /locus_tag="RJ239_000460"
     CDS             complement(12418..12765)
                     /locus_tag="RJ239_000460"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HDV7330603.1"
                     /translation="MRVGCDIIAISRIEKIHSRHGKNFLDKFLSPKEQILIKNPATLA
                     GLWAAKEAASKALGVGICELCSFFDIEISKDEKNAPKLKYSQKITKDFNITQTSLSIS
                     HDNGFAIAIVAIV"
     gene            complement(12765..13301)
                     /gene="fliL"
                     /locus_tag="RJ239_000461"
     CDS             complement(12765..13301)
                     /gene="fliL"
                     /locus_tag="RJ239_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated protein FliL"
                     /protein_id="HDV7330604.1"
                     /translation="MDEELENEETKKKKGGSLVIIIVILLFVLLLSIMGVIAWLISSS
                     SSDESEVKEAPKEEAKADKPKVSAPTQRGSDFANIGPMYPLDPFTLNLLSDSGSRYVK
                     CTIELEQNSELLKPELDKKVPVIRDIIIRTLTAKTFEEVSTQKGKERLKDELVGKINE
                     ILTDGFIKNVYFTDFVVS"
     gene            13423..14793
                     /gene="pgmL"
                     /locus_tag="RJ239_000462"
     CDS             13423..14793
                     /gene="pgmL"
                     /locus_tag="RJ239_000462"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase PgmL"
                     /protein_id="HDV7330605.1"
                     /translation="MLDVIFREYDIRGLYGKELNEKSVKAIGFCLGQTMLNKGCKNVS
                     VGYDARYSANELFNYLVSGLNKAGIKIYDIGLVPTPLGYFSLYEGLKFDANVMITGSH
                     NPKDYNGFKITINKESFFGVELKEFSKEVYKHLDDDIEENLEVEKYDILSLYVKFMCE
                     QFSFLKDFNYKFGVDCTNGAAGVVIKPLIKALNLKAHVMFAKPDGQFPNHAPDPTEEE
                     NLSAIREFLNQNQDYSLAFAFDGDADRMVALSKTYVFCGDELCYLFAKNIPNPRILGE
                     VKCSKNLFDEVAKFGTIFMGKTGHSNIKKMMKEKDIDLAAEVSGHIFFKHRYFGYDDG
                     IYAFLRALELVYKGFDLESMIKALPKLYTTPEIKIPVNEEEKFKLVEEFQKEIEKGAL
                     KGVKSLCEIDGARIDFGDGWALLRASNTSPYLITRFEATSLERAKELESTVFSLFNEI
                     KARLKN"
     gene            14841..15218
                     /locus_tag="RJ239_000463"
     CDS             14841..15218
                     /locus_tag="RJ239_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002870609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1090 family protein"
                     /protein_id="HDV7330606.1"
                     /translation="MKKILVLLLLCAFAFGASECDRKIDRINKEISFSKAHNDTARTL
                     SLELALKQVQNDCAKDPMFYDKKLEAKKLKEQEVEKIEKELDALKEQKDYMSKAEYKA
                     KKEALKEQKEKIKKEIKEYIDNL"
     gene            complement(15249..15575)
                     /gene="rsfS"
                     /locus_tag="RJ239_000464"
     CDS             complement(15249..15575)
                     /gene="rsfS"
                     /locus_tag="RJ239_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HDV7330607.1"
                     /translation="MQERIDLIVKILDEKKAEDIKTIDMSEQEYFVKYVIIAATLGER
                     HALSLIDELKTQLKAKGEEFLNIDSSEEWSVIDLGDILIHLLTPEHRGIYNIEELLEN
                     LKKGRV"
     gene            complement(15603..16148)
                     /gene="nadD"
                     /locus_tag="RJ239_000465"
     CDS             complement(15603..16148)
                     /gene="nadD"
                     /locus_tag="RJ239_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HDV7330608.1"
                     /translation="MKIALFGGSFDPPHNGHNSVVLEALEKLDIDKLIIMPTYINPFK
                     QSFSADEKQRFLWVKKLWGHLPKVEICDFEIRQKRPVPSIESVKYLYKLYNPSKFYLL
                     IGADHLEKLHLWHDFEKLNSLVEFVIANRNDIEIPKNFKDLKTDKKIASSFIRNTLNT
                     NEVCEEIKDEVKKYYEKLQKN"
     gene            16208..17206
                     /gene="gap"
                     /locus_tag="RJ239_000466"
     CDS             16208..17206
                     /gene="gap"
                     /locus_tag="RJ239_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HDV7330609.1"
                     /translation="MAVKVAINGFGRIGRCVARIILERNDIELVAINDTTDIELTKYL
                     FKYDTVHGEFKGSVDSEGDDLVVNGKKIKVFKSRNVKDLDFAKHGAQIVLECTGAHLT
                     MAKCQEFIDMGVQKVIMSAPAKDDTPTYVLGVNSELYKGESIISNASCTTNCLGPVCR
                     VLQDNFGIEKGLMTTIHAYTNGQSIIDAKAKDKRRSRAAAQNIIPTSTGAAKAMKLVM
                     PELNGKLHGQSMRVPVIDVSSVDLTAQLSRKVSKDEINEAFRKAAATNLKGILMVDDD
                     ERVSSDFITCSYGAIVASDLTQVIADDFIKVIAWYDNEWGYSSRLVDMAVYIANKA"
     gene            17209..18411
                     /locus_tag="RJ239_000467"
     CDS             17209..18411
                     /locus_tag="RJ239_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HDV7330610.1"
                     /translation="MSDIISIKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIP
                     TIRYCLDNGCSVILASHLGRPKEISSKYSLEPVAKRLARLLDKEIVMAKDVIGEDAKT
                     KAMNLKAGEILLLENLRFEKGETKNDENLAKELASMVQVYINDAFGVCHRAHSSVEAI
                     TKFFDEKHKGAGFLLQKEIDFASNLIKHPARPFVAVVGGSKVSGKLQALTNLLPKVDK
                     LIIGGGMAFTFLKALGYDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPAC
                     SQDAPMKFVPAQEIPNGWMGLDIGPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKG
                     SIKMSHYISEGHATSVVGGGDTADVVARAGDADEMTFISTGGGASLELIEGKELPGVK
                     ALRSKENE"
     gene            18408..19079
                     /locus_tag="RJ239_000468"
     CDS             18408..19079
                     /locus_tag="RJ239_000468"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HDV7330611.1"
                     /translation="MIFAANLKCNHTRASFKIYAKILNKTMGVKCDDIIVFPPSIAFL
                     ENENNFIQGAQNFYPCVNGAFTGELGKEHLDEFGIKCVLIGHSERRALGDEEFIKAKF
                     DFAKEHGYKIVFCIGENLDTKNSGKTLEFLKKQLEIIDLNYEKLIIAYEPIYSIGTGV
                     SAQSTDIAKVLEFLASLTKVPLLYGGSVNENNIKEILSVNHCGGVLIGSAALKVENFI
                     KLIKG"
     gene            19083..19907
                     /gene="fabI"
                     /locus_tag="RJ239_000469"
     CDS             19083..19907
                     /gene="fabI"
                     /locus_tag="RJ239_000469"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HDV7330612.1"
                     /translation="MIMKGKKGLIVGVANNKSIAYGIAKACFDQGAELAFTFLNDALK
                     KRVEPIAQEFNSNFVYELDVNNNEHLDSIAEKIKKDLGEIDFVVHAVAFAPKEALENS
                     FLETSKEAFDIAMQTSVYSLLSLTRAVLPILKDKGSILTLSYLGGVKYVPHYNVMGVA
                     KAALESSVRYLARDLGVKGIRVNAISAGPIKTLAASGIGDFRMILKYNEINSPLKRNV
                     SIEDVGNSAMYLLSDLANGVTGEIHYVDAGYNIMGMGDVEKNEEGQTVLCWDNQKG"
     gene            19911..21404
                     /locus_tag="RJ239_000470"
     CDS             19911..21404
                     /locus_tag="RJ239_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HDV7330613.1"
                     /translation="MAKLSNEELKNILEDRIKKLENSTLKEDKVINEESVKILARHLS
                     LGNEIPALAQRFFQIAPKTKLVWLHLCECTGCSESLLRSELPSFDELIFDFFSLEYHE
                     TLMAANGTKAEELLEYVLEEDFILAVEGGVAAIDTFFLTIGAQGESGYEILEKLAAKA
                     KAIFAVGTCSSYGGIQAAYPNPSKTCGISEVLSQKVVNIPGCPPSDINIIATLSFFAL
                     FGVLPELDEQNRPVWAYGKCLHDMCERKAKFESGIFAEHFDDEAAKNGACLFKIGCKG
                     PYTYNNCPKVKFNAKTSWPVAAGHGCIACSEKNFWDEFGNYEKPMANIFSYAKLCNEE
                     LKQEFFLEEQIKILEQIDFEFESNIKLILQNIAKNKLGALLVENYKKSFEKNYAFIEQ
                     NFDENPMPSKDFWKYLEISFILVKGAFLKDKNDFLIVAKNYAFKHASPYDFKLNMNAE
                     KPKLDVSKSFRMTLIYLCGGLDFEGVAYSILKAFEDNIAKISSLKAS"
     gene            complement(21401..23242)
                     /gene="feoB"
                     /locus_tag="RJ239_000471"
     CDS             complement(21401..23242)
                     /gene="feoB"
                     /locus_tag="RJ239_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HDV7330614.1"
                     /translation="MKKIKIALVGQPNVGKSLLINALCKANMKVGNFSGVTIEKASAK
                     TFYKNYEFEVIDLPGTYSLDGYSEEEKITRHFLNQNDYDVIVNVLDATNLERNLILSA
                     ELLSLNKKMLLALNMCDEAKKEGIELDTSILSQEFQSQVVEISAKTKENLELLLQKII
                     ILFESKFIPRSQFYTPLCEKSPEKEDLLYFINELSKKIITHKKEERNLTKKIDALLIH
                     KFFGLPIFLFLMWLLFQLTFSLGQIPMDYIESGFNTLGEFVKNNISNTFIASALADGI
                     IAGVGAVILFLPNIMILFLGIALLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGF
                     GCSVPAFMATRTLKNKRDRLLTLFVINFMSCGARLPVYVLFIGAFFPSEKAGNYLFGI
                     YILGAILGLCAAKFLRMTAFRGLDEPFVMEMPKYRMPNWHLVWFMVYNKAKMYLKKAG
                     TFILLASLLIWFASNFPKSEENLNDFNAQERAIEQSYLGQFGKGIEPIFQPLELDWKL
                     SVSLISGLAAKEVMISTMGVLYSLGKDVDETNNDLKGIIAKNIPIPSAVAFILFVMIY
                     NPCFAATIVFSKESGKLKYTLFLFLFTCTSAYIVAFIGLHIAKILLN"
     gene            complement(23239..23463)
                     /locus_tag="RJ239_000472"
     CDS             complement(23239..23463)
                     /locus_tag="RJ239_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein A"
                     /protein_id="HDV7330615.1"
                     /translation="MTLNELKDGQKAIIVNLNAHKELKNRLLSFGFIKNKNLKKIHSS
                     LKNATIMVELDTSCVILRSDEAKTIEVNLI"
     gene            complement(23545..24885)
                     /locus_tag="RJ239_000473"
                     /pseudo
     CDS             complement(23545..24885)
                     /locus_tag="RJ239_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843169.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
     gene            complement(24894..26261)
                     /locus_tag="RJ239_000474"
     CDS             complement(24894..26261)
                     /locus_tag="RJ239_000474"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDV7330616.1"
                     /translation="MTGISVFDHRLLADSWSTQEMRAIFCEQNRIQKWLDVEAALAKA
                     QAKLKIIPKKAADEIAKKAHYKFMDMDFIFAEFKKTKHPLVPTVRGLEKACDNNLGEY
                     VHFRVTTQDIIDTGLVLQFKEAMTLVKSELKAIAKALAKLAKTHKNTAMMGRTLALQA
                     LPITFGHKVAIWLSELDRHFERILELEKRLYVGSIVGAVGTKASLSDECNEVEKLTLE
                     NLGLEVPNISWQSTRDRFIELGFVLGNINATFNKIAHQLLILSHNEIDEVAEPFGKGQ
                     VGSSTMPHKRNPAVSENAVTVSNAFKANLAILSDIERHEHERDGQVWKMEWKLLPEMF
                     LMLSVVLANMKFALSDLEVKKDKMLKNLDTLKGFVLAERVMFALSDHYGKQHAHEIVY
                     ENAMLGIEQQKTFKEVLLADTRVSQVLKEKDIDALLDATSYVGYAPKLVDEFLAKIKN
                     SAILK"
     gene            complement(26271..27433)
                     /locus_tag="RJ239_000475"
                     /pseudo
     CDS             complement(26271..27433)
                     /locus_tag="RJ239_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866696.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
     gene            complement(27446..28885)
                     /gene="dcuC"
                     /locus_tag="RJ239_000476"
                     /pseudo
     CDS             complement(27446..28885)
                     /gene="dcuC"
                     /locus_tag="RJ239_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247107.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DcuC"
     gene            complement(28889..29251)
                     /locus_tag="RJ239_000477"
     CDS             complement(28889..29251)
                     /locus_tag="RJ239_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDV7330617.1"
                     /translation="MSNYPKAIGPYSAYREVNGLLFISGQLPINPASGEIESSDIKEQ
                     TKQSLKNIGAILEENGISYDKVIKTTCFLADINDFVAFNEIYAEFFKAPYPARSAFAV
                     KDLPKKAKVEIEIIAQKG"
     gene            29419..30075
                     /locus_tag="RJ239_000478"
     CDS             29419..30075
                     /locus_tag="RJ239_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDV7330618.1"
                     /translation="MDEGQKQQFIKLTYFLGEVLGEQYEIVFHVITEDGAYIAAIANS
                     HISGRSLDSPLTAFASELMQNKKYLEKDFLCDYKALVGKSKLIRGSTFFIKNHDKLVG
                     ILCINHDTSIMRDLICKMIDLEKIGDMGDILGNISFSQNDSSIETLSHSIEDILVQSV
                     DSSYLNSDYQLSITQKEEIAEKLYEKGIFNIKGAVPIVAKFLKISEPSVYRYLKKFKK
                     "
     gene            complement(30076..30546)
                     /locus_tag="RJ239_000479"
     CDS             complement(30076..30546)
                     /locus_tag="RJ239_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj1386 family hemin-binding protein"
                     /protein_id="HDV7330619.1"
                     /translation="MTTLSLEEEKRFEELCKMAFNFARNNECENLKIMIEAGLNVNLK
                     THKGDSLLMLAAYNNSYESAKMLLEKGAKVDEKNDRGQTPLAGVCFKGYLPMCELLVK
                     YGANIDENNGLGMTPYTFAIMFGRKDVAEFLLKKSKNNFLKKISLKILKFIKKF"
     gene            complement(30603..32027)
                     /locus_tag="RJ239_000480"
     CDS             complement(30603..32027)
                     /locus_tag="RJ239_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HDV7330620.1"
                     /translation="MKKLTNDFGNIIADNQNSLSAGAKGPLLMQDYLLLEKLAHQNRE
                     RIPERTVHAKGSGAYGEIKITADLSAYTKAKIFQKGEVTPLFLRFSTVAGEAGAADAE
                     RDVRGFAIKFYTKEGNWDLVGNNTPTFFIRDAYKFPDFIHTQKRDPRTHLRSNNAAWD
                     FWSLCPESLHQVTILMSDRGIPASYRHMHGFGSHTYSFINDKNERFWVKFHFKTQQGI
                     KNLTNQEAAELIAKDRESHQRDLYNAIENKDFPKWKVQVQILAEKDIEKLGFNPFDLT
                     KIWPHSFVPLMDIGEMILNKNPQNYFNEVEQAAFSPSNIVPGIGFSPDKMLQARIFSY
                     PDAQRYRIGTNYHLLPVNRAKSEVNTYNVAGAMNFDSYKNDAAYYEPNSYDNSPKEDK
                     SYLEPDLVLEGVAQRYAPLDNDFYTQPRALFNLMNDDQKTQLFHNIAASMEGVDEKII
                     TRALKHFEKISPDYAKGIKKALEK"
BASE COUNT        11153 a         4382 c         5516 g        10977 t
ORIGIN      
        1 attttagata tggatagttc agtgggtttt tatattgata agcaagatta taataaatta
       61 aaaaatgata gtatttttta taagcaagta atagattatc ttcggaattt tgcttatgaa
      121 ttaaaaaata gaattcaaat agaagaagat ttgatgctta aagttgaaga tgttttgaga
      181 catttatata ataataaaaa tgctagagta agtgctaaaa atatcttgga tgaagaattg
      241 gtttatatta aacaacatcg tccagatata gtagcttctt ggaaatatta ccaagaattt
      301 gaaaaaatgt gcaaggagtt ggatggtgat atttaggaga aagatttgta aattaataaa
      361 aaaaagatat aattatgttt taatttagaa aaaggaatga atatgaaaca aggggatttt
      421 acaaaagttg caaaacatta tcacaataga cctgcttata gtccgttttt acttgaaaaa
      481 cttgtagctt gtatcaatga taaaaataaa aatttaaaag atttaaatat tgttgaagta
      541 ggagctggaa ctggaaaact tactaagatg ttgggagaaa tgtttggatg ccaaattagt
      601 gctgtggaac caaacgataa tatgcgtgaa gaagggcaaa aatttacaca aaatttatca
      661 aatatttctt ggcataaagg gagtggcgaa gaaacctgca tgagcaataa tcaagctgat
      721 tgggtcatca tggctagttc tttccattgg acagatccta aaaaatctct cccagaattt
      781 aatcgtatat tgacaggggg ggggtatttt actgcgattt ggaatcctcg ccacattgta
      841 gagggttcgg tttttgatga aattgaaaag gagattaaac atattgttcc agatcttgct
      901 cgtgtaagca gtggcactca aaatgttaaa aaatgggaag aaattcttgt ttcaacagga
      961 gatttcatag actgcttttt tatggagtgt gactataaag agttttggga taaagagcgt
     1021 tatcttggag cttggcattc tgtaaatgat atacaagcac aagcaggtga aaaaagatgg
     1081 aaggaaattt tagagatgat agaagctaaa atttctcata tgcaaagtat agagattcct
     1141 tataaaataa gagcatggac agctagaaaa gcataaaata cctccttttt ttcatcaagc
     1201 ttgtcaaaga tgaaaaaaag gaaataaaat gcaaaaacta gtagaacaag tgtgggatta
     1261 taccaagcat gctaaatttt atagctatag accaaattat gctccaaaaa ctatagatat
     1321 gcttattagc ttagttggaa aaaaagatat taaagtcgct gatatcggtg caggaactgg
     1381 aaatttaagc attatgcttt tagaaagagg atgtaaggta gtatctgtag aaccaaatga
     1441 tgcgatgcgt gagatcggga tagaaagaac caaggatcaa aagattgact gggttagagc
     1501 aacaggctta aactcaacac tccaaaatag tgaatttgat tgggtgactt ttggtagtag
     1561 ttttaatgta atggatagaa atgaagcctt agaggaagcg catcgcttat taaaatcaga
     1621 gggatatttt tcttgtatgt ggaatcacag ggatttaaac gatcctgtgc aaaaaatagc
     1681 tgaagatact attgtagaat ttgtaccaaa ttatacaagg ggaacaagaa gagaagatca
     1741 aagaccaatt atagagagtc gaaaggatct ttttgataat attgtttata ttgaagagga
     1801 tttttatttt catcaaagca ttgaaaatta tattaatgca tggaagagtg ttaaaaatcc
     1861 ttactgggat ttggagactg atgaaggaaa tgaacttttt aataaaatta gtaataaaat
     1921 ttcacaaaga cttcctaagg aatttagcat aaaatatacc actcgttgtt ggagtgctaa
     1981 aaaaatataa aactaaggaa aaacatggcg gagttaaaat ttaaaaccaa agcacaaaat
     2041 ttaaaaaatt tacaaacaaa attaaaaaaa gcaaaagttc tacctttggt tttaacttcg
     2101 cttgaagaat taatatcaaa tgaagataaa gttttacagg acattcaaac cttaaaggct
     2161 aatagactca ttataagaag ttcttcttta agtgaagata gcatgaaaaa ctccaatgca
     2221 ggtgcttttc tttctttggc aaatattaaa gctgattcta aagatgagtt attaaaagct
     2281 ttatatgaag ttgccaattc tatgccatca aaaagtgatg aaattttagt tcaacctatg
     2341 cttgaaaaca ttactctttg tggagttggt tttagtgttg ataaggataa tttttcccct
     2401 tatttttgtc ttcaatatga tgaaaatggt tcaaatagct ctattacaga tggaagcagt
     2461 aagagtgcaa aaacttacta tcattacaga aattatttag aatttaaaga tattagactt
     2521 caaaaaatta tagaacttat aaaagaatta gaagttttat atgattgtca ttttttagat
     2581 gttgaatttg catttgctat tcaagatgat aaggaagaac ttttttgctt acaagtgcgt
     2641 cctttggtta tgcatgaaaa aaataattta tttcattctt taccaaaaga agctttatat
     2701 agattttata aacgttttga gtctttaaaa gaatcaagat ctagagtttt gggagataaa
     2761 gctatttttg gggtaatgcc tgattggaat ccagctgaaa tcatagggtt aagacctaag
     2821 cgtttagctt ttagtttata taaagaaatc attacggata atatctgggc gtatcaaaga
     2881 gataattatg gttatagaga tctaagatcc catcctttaa tccattcttt tttaggcatt
     2941 ccttatgtgg atgtaagatt atcttttaat tcttttatac caaaaaaatt agatgaaaat
     3001 attgcacaaa aacttgtcaa tttttactta gataagctta ataaaaatca tgaattgcac
     3061 gataagattg aatttaatat tgtttattct tgttatgact ttaatagttc taaaaaatta
     3121 gaagaacttt taaatcatgg ttttaatgaa aatgaaatca aaagattaga attttcatta
     3181 ttagaactta caaataagat tattaatcct agatcagggt tttatttaaa agacatacaa
     3241 aaagcttata agctaaaaga aagatatgat ggcattatta attctaattt ttctttaatt
     3301 gataaaattt attggcttat tgaagaatgc aagcgttatg gaaccttgcc ttttgctggg
     3361 gtggctaggg ctgcatttgt agcaatgcaa cttttaaatt ctttagttga gattgatttt
     3421 ataaccaaag aggaaaaaga tgatttttta aattcactca atacagtgag caaaaattta
     3481 agcaaacaaa caaaccatct taattttcac aacaaagatc aatttttaaa agattttgga
     3541 catttaagag caggaactta taatatttta tcgccaaggt atgatgaaga ttttgagctt
     3601 tattttgatg cagatcaaaa agatagtaaa gtttatttac aagataaagc ttttgttttt
     3661 tcagaagaaa agacaagagc tttaaatgct ttacttaaag aacatggact agaaattaat
     3721 gcttgtgaat tttttgattt tttaaaacag gctatcgagg gtagagagct cgttaaattt
     3781 gaatttacta gattgctttc taaagccata gtttatatag aagaattagg caaatattat
     3841 gatattgaaa aagaagattt ggctcatctt gatataaaaa gcattttaaa tctttattct
     3901 agtctttatt ctataaatcc aaaagagcag tttatagaag aaattaatcg caataaaaaa
     3961 gaatatgaac ttacacaagc tataaaactt ccttctttac tttgtaatgc tgatgaaatt
     4021 ttttcttttt ataatcatag cattattcca aattttatta cacaaaagag cattgctgca
     4081 tttacggcga aggaaaatga taaagattta gaaggaaaga ttgttttaat ttatgcagca
     4141 gatcctggat atgattattt atttacaaaa aatatagcag gacttattac atgttatggg
     4201 ggtgctaatt cacatatggc cattcgtgcc tcagaacttg gaatgcctgc tgttatagga
     4261 gttggagaag aaaattttga aaaatattta aaagctaaaa aaataaatat agaatgtgaa
     4321 agtgagcaaa tattttgttt ataggtatta ctcaaaggct tatttgcaac gatagttatc
     4381 atgaaaaaag agaatgtttg gctttggatt ggggaaaatt atttaataaa gatttattta
     4441 aaaattttac tcctcttcct cttagctatg aaatagattt ttcttattat aaacatctaa
     4501 taaaagctgt gatattaagt ggtggcaatg atttaagttt ttatagtcct aatgttttat
     4561 ccaaaaagag agatttatat gaaaagcaag ttatagaaat ttgtttagaa gaaaaaatac
     4621 cacttttagg aatttgcaga ggggctcaga tgatagctca ttattttaac agccatataa
     4681 gtccttgtga aaatcatata ggcaaacatg aagtattttt ctcaaaagaa aaatttataa
     4741 gcaattcttt tcataatttt gctattgaaa aattaggcga agatcttgta gaactttgct
     4801 tagcaaaaga taataccata gaagctttta aacataagta tgaaaatatt tttggtataa
     4861 tgtggcatat tgaaagagaa aatggactta ataatattca aattttaaaa gagtggttta
     4921 gtttaatcaa ggaataatat gaatgcaatt atcttagcag caggttttgg atcaaggctg
     4981 atgcctttaa caaaagatca accaaagtgt atggttgagt ataagaataa aaaaataata
     5041 gattatgaaa tcgaagcttt aaaatcagca ggtataaatg aaatagctgt tgtgggtgga
     5101 tatttaaacg atgtgctaaa aaattatctt aataaatatg atattgagca tttttttatt
     5161 aattcaaaat atgataaaac caatatggtt catacttttt tttgcgctaa agattttatg
     5221 ttaaaatgca tcgaagaaaa acaagatttg attatttctt atgcggatat tgtttatttt
     5281 caagattgcg tgcaaaagct tataaatgcc aaagaagaac ttgctatagt agttgataag
     5341 tcttggtgta agctttggag caaacgcttt gcaaatcctt tagaagatgc tgaaacatta
     5401 aagatgacaa atggttatat tatagaactt ggaaaaaaag ctaatgccta tgatgagata
     5461 gaagctcaat atataggact ttttaaattt tcttatcaat ttctttccga agttattgct
     5521 ttttatgaaa tgcttgatcg agatatttta tatgataata aaaattttga aaatatgtac
     5581 atgacaagtt ttttgcaagc tttaattgaa aaatacaaca acgcaaaagc agtggaaatt
     5641 gatggcaatt ggtgtgaaat tgattttatg agtgatttag aggtgcaaat tgaaaaataa
     5701 tccttatatt atttggctta ctggtttagc tggaagtgga aaaacaacta taggtcaagc
     5761 tttgtatgaa aaattaaaat taaaatataa aaaccttatt tatctcgatg gagatgagtt
     5821 aagagaaata ttaggacatt atgcatacga tagacaaggt cgcatagata tggctttgaa
     5881 aagagctaaa tttgcaaaat ttttaaacga tcaaggtatg atggttattg tcactacgat
     5941 ttcaatgttt aatgagattt atgattacaa tagaaagcaa ttaaaaaatt attatgaaat
     6001 ttatatagaa tgcgatatgc atgaattaat acaaagagat caaaaagggc tttatactaa
     6061 ggctttaaat aaagaaattg ataatgtagt tggtgttgat atagaatttg ataaaccaga
     6121 ggctgattta gtgatcaata attcttgtcg aaataattta gaagaaaaag ttgaacttat
     6181 aataaagaaa ttggcattgt gaagtattac tcaatatcaa aaaaacttat tgctaatgtt
     6241 agaaattttt acaccatttc tttgtataag aaaaatttaa aaatcaaaaa agatgatctt
     6301 ttctttggtt ggggacgcaa aaaatcaggt ttaaaagcta tgaatttagc taaaaaatat
     6361 aaggctaaat tcatactttt agaagatgga tttatccgct cattaaactt aggggttgaa
     6421 aatagcccaa gtttttctat ggttaaagat gatataggca tttattatga tgcaacaatg
     6481 ccttcaaagc ttgaaaatct tttaaatact tgtgaattta aagatgaaga aatcaagcaa
     6541 gctaaaaaag ctatagagct tatcaaaaaa tataaaatta gcaagtataa taacaatctc
     6601 gatattccag ataattattt tcaaaaagat gaaaaacgcg ttttaatcat cactcaaacg
     6661 gccaatgatg cctctcttga atttgggctt gctaaagatt ttaaaactct tgatatgata
     6721 aaagatgcca taaaagaaaa tcctaaatct acaatttata taaaaatcca tccagatgtt
     6781 ttaagtggta aaaaacaaag tgatttagat ttaaattcct tacctaaaga atgtatttta
     6841 atcactgaaa attttaatcc catagccttg cttgagtttt ttgataaggt ttataccaaa
     6901 acttctggta tgggttttga agctttgatg caagaatgtg agtgtatttg ttatggcatg
     6961 cctttttatg cgggctgggg tctaacaaaa gataaattag agtgtaaaag aaggatgcaa
     7021 aaaagaagtt tagaagaagt tttctatgct gcttatatac tttatgctga gtattttaat
     7081 ccttatttaa atcaaaaaag taatattttt gatactattc aaactttagc aaaatataaa
     7141 gatatagaaa aggtaaattc taacaagctt tttatgctag gctttaccct atggaaaagg
     7201 cattttatca agcctttttt taaggctaaa gataatgaaa ttattttttt aaattcttta
     7261 aaatctttag ctagatataa acttaaagaa aatgataaat ttttcatttg gggtaaaagg
     7321 atagattata acgctcttaa aactactctt ataaaaaaag cgcaagatga gaatttgctc
     7381 cattttactc ccaaaatttc tttagttgaa gatggattta ttcgctcaat ctctttaggt
     7441 tctgatctta cgcgcccttt ttctttaatt gttgatgata aaggacttta catagatcca
     7501 aataaagcaa gtaaattaga agagcttttg caaaacgaaa tttttgatga aaatatgcta
     7561 aatagggcaa aaaatattat aaaaatctta cttgagaacc gcttttcaaa atataatggc
     7621 ttaaagcatg aagacttaaa aatcaatgtc aaaacagggc aaaaaattat tttaatccct
     7681 gctcaagttg aagatgatgc ttcgatgatt ttagggggtt ttggcttatc tactcttgat
     7741 ttgcttaagg aggtgcgttc taaaaatcaa gatgcttata tcatctttaa gcctcatcct
     7801 gatgtgttaa gtggcaaccg tgtaggttta aaagatgaaa cactcatctt ggaattttgt
     7861 gatgagattg taaaagattg cagtatcgat agtgctataa aaattgctga tgaaattcac
     7921 actattactt ctacaagtgg ttttgatgct cttttaagag ctaaaaaagt ttttacttat
     7981 ggtatgcctt tttatgcggg ctggggttta acaaaagata aatatagatg cgaaagaaga
     8041 acaagaaaac taagcctaga agagcttgta gcaggtgctt tgatagcata tccaagatat
     8101 ataaatccta aaacaaaaac tttatgtgaa attgaagttt gtttagatat aatgctaaat
     8161 ttacaaaaag cttatttttc aaaaaaatat ataaaattgg caatagattt taaaactttt
     8221 atgcttagaa aaataagaag attttatgaa tttttagcaa agaaatgaga tttagcacta
     8281 aaattaaaaa agaatttagc ggtaaaaatg ttttactctt gcaagggcct gtgggaaatt
     8341 tttttcatca tcttgcaata aaaatgaaaa aaaaacaaac caaagttttt aaactcaatt
     8401 ttaacggtgg agattttttt ttctatccta gtggaacgag gtgtaagtgc gatgaaaaag
     8461 atcttgaaaa tttctataga gatttttttc aaagcaaaaa aatcgatgct attttaatgt
     8521 ataatgactg tcgcattata catactaagg ctattaaagt ggctaaagaa ttaggaattg
     8581 aaatatggat ttttgaagaa ggatatttaa ggccttattg tattactttg gaaaaagatg
     8641 gagtgaatgc aaattcttct ttaccgcgtg ataaaaattt ttatctttct caaaatattt
     8701 ttaccaaaga aagcataaaa gaaattccag gtggatttaa atttatggct tttgatgctt
     8761 ttttgtattg gttgtttgct tttattttgg ctccattttt taacaacaaa cttcatcatc
     8821 gcactttata tccttttgaa tttttatttt ggtttagatc attgtataga aagtatcttt
     8881 ataagattac agaaaaaaaa ctaaatgaaa agatttataa tttagaaaaa aagtactttt
     8941 tggcgatttt acaagtttat agcgatacgc aaattaaata tcattacaaa aaaagcatag
     9001 agcactttat agaggaaacc atactttctt ttgcaaacca tgcaagagct aaatcttatc
     9061 tagtttttaa acaccatccc atggataggg gctataagaa ttattctaaa ctcataaatg
     9121 atttaagtca aaaatatcat gtagaaggaa gggttttata tgttcatgat acccacttgc
     9181 cagttctttt aagaaaggct ttgggttgta ttactataaa ttcaacagta ggccttagtg
     9241 ctattttaga aggctgtccg actaaggttt gtggcaatgc tttttatgat tttgaaggct
     9301 tatcttatcc aaaaaaactt caattttttt ggcgtgaagc tcatgcttat aaacccaatc
     9361 ctgttttagt atgtaatttt aaaaaatatc ttttacaaac taatcaattc aacggcaatt
     9421 tttataaaaa tttcttttta gacaaataag actaaaaagc tttgattaag agagctttta
     9481 aagcaaagtt gttataatta aaagcaaaaa gaaattattg tatggatagg gaagtatttt
     9541 atatagcagg atatgatcct aaaagttata gattttatta tgatttattt aaaaaaaacc
     9601 taaaagatta ttctcatgct tttaacatta aagttgattt aagtaaaatt gaaaaaaatg
     9661 agcaatttcc tttttttcaa atttcttgcg aaggagtaca aactacatat cattttttaa
     9721 catggaatga tattgttaag aaaaattggt cagaaaatta taaagatgct ttggcagatt
     9781 gttatagttt ttttagaatt tatactatca cagggctttt tatcaaattt ggcaaagagt
     9841 cgatttatca acttatcaca ggttattatc ctttttttta tgtgttattt tctttactat
     9901 tttctttggt tgtggctttt ggaagttttg cttttttgca aaattatatg catttttctt
     9961 tagctatcat cataggatgt tttttaggat ttttactaaa tcatttttta tttaaattag
    10021 gtaagaaatt agctgtattt tggatagcaa gaatttgtgc tttttgtgct acttggcaag
    10081 ataaaaaaac aggcactatg caagaaagaa tcaagctttt tgcgaatacc atagtagata
    10141 agttaaaaca aaatgaaaat aaacaagatt atgaacttgt tttagtagca catagtgttg
    10201 gaactatagt ttgtatagaa gttttggagt gtattttaag acaaaattta gatttatctt
    10261 tacttcataa gttaaaaatt cttactctag gagaatgcat tcctttagtg agttatcaaa
    10321 aaaaagcgga tgaatttaga aagaagcttg aatttgtttc aaggtttgat ttaaaatggt
    10381 atgattatac atcgattatt gatggagcat gttttcctca agtggatttt ttccgcacga
    10441 gtggcgtaaa tgctaaattt acacccccat ttttaagtgc taaatttcac actttatatg
    10501 aaaaacatga gtataaaaaa ataaaaagag ataaaaacaa agcgcacttt ttatatcttt
    10561 atagtattag tgttaaaggt gattatgatt ttttttcttt catcataatg cctaaatttt
    10621 tagaagaaaa ggtaaaaata tgagtgaatg cccctttttt ccaaaacctt ataaaaataa
    10681 agcttctacg cttttaactt ttttgttaaa gcgtagatct tggcttgacg ggctttatga
    10741 gcgtagttat aaaatgcaaa caggctatgt gaagatgcca aattttgatc tttatgtcat
    10801 aaatgacact aaagaagtta aaagaatgat ggttgatgag gttagagaat ttcctaaaag
    10861 tgcattttta catgagcttt taagtccgct tttaggggag agtattttta ctacaaatgg
    10921 tgaagtttgg aaaaaacaaa gagagctttt gcgtccaagt tttgaaatga ctcgtatcaa
    10981 taaagtgttt aatcttatga gtgaagctgt ggcagatatg atggatcgtt ttagcaagta
    11041 tccaaatcat gctgttatcg aagtagatga agctatgact tttattaccg ctgatgtgat
    11101 ttttcgcacc attatgtctt caaaactcga tgaggaaaaa ggtaaaaaaa tcttaaacgc
    11161 atttgtgact tttcaagagc aaagcgtgca tacagccatg cgtcgtatgt ttcgttttcc
    11221 aaaatggctt tcttatgtgt taggagatcg taagcgtgct aaagccggag atgtgatcag
    11281 acaggtttta agtgatatca taaaaccaag atatgatatg gcagataatg cagaatttga
    11341 agatatttta ggatctttgc ttttagtagt ggatgctgat acaaataagc gtttttcttt
    11401 tgaggaaatt ttagatcaag tggctatgct ttttttagca ggacatgaaa ccacagcaag
    11461 ttctttgaca tggacgcttt atttgctcag tctttatcct aaggagcaag aaaaagctta
    11521 cgaggagatt actcaggttt tacagggtgg agccattgaa atttcgcatc taagacagtt
    11581 taaatactta acaaatattt ttaaagaatc tttaagactt tatcctcctg ttggtttttt
    11641 tgcaagagag gcaaaaaaag atacccaagt tagagataag cttattaaaa aaggttctgg
    11701 ggtggtgatt gctccttggc tgatacacag acatgaagaa ttttggacaa atccgcatgg
    11761 atttaatcct tctcgttttg aaggagagta caaaaaagat gcttatttgc cttttggggt
    11821 aggggaaaga atttgtatag gacaaggttt tgctatgcaa gaagcgattt tgattttggc
    11881 taatatttta aaaacttaca aactagaact tgaagaaggt tttgtacctg atgtagtagg
    11941 gcgtttaaca gtgcgttcgg ctaatggtat gaggataaaa tttagcaaaa gaaagctatg
    12001 aaaagagtta gaactaaaat tcgcgccaat tttcgtcgtc gtgtaaaacg caccttaaaa
    12061 ggaagcttaa aagaaaaatt agcaggtact attttgcttt gtgcaatagt acctttagca
    12121 gttttaggat atctttttat cgtgattata ggaacttttt ttaataccgc acgagcaaga
    12181 cagggtgtta gagccttaga tcattttgta aatgcaagct tgtttaatgg ctatgcttgg
    12241 gagagcgttt cttctcatgc gtggcgtgaa agaaatcgta aaaaatgggc aaggattgtt
    12301 ataaaaatca cagatttttt tcaaaaagat cattgtaaaa gagcaaataa aagagaacaa
    12361 cctgtggtag atttcataat ttcaagaaat ttagacaagc aaactatagg aaaataatca
    12421 aactatagcc actatggcta tagcaaaacc attatcatga gaaatgctta gggaagtttg
    12481 agtgatatta aaatcttttg taattttttg agaatatttt aatttaggtg cgtttttttc
    12541 atcttttgat atttcaatat caaaaaaact gcataattca caaattccaa cacctaaagc
    12601 cttgctagcg gcttctttag cagcccaaag acctgctaga gttgctggat ttttaatgag
    12661 tatttgttct tttgggctta gaaatttatc caaaaaattt ttgccatgtc tagaatgaat
    12721 tttttctatc ctagaaatgg cgatgatatc acagcctaca cgcattaaga aactacaaaa
    12781 tccgtaaaat aaacattttt aataaagcca tcggttaaaa tttcattgat ttttccaact
    12841 agctcatctt ttaaacgttc tttgcctttt tgtgtactta cttcttcaaa agttttagct
    12901 gttaatgtac gaataataat atcacgaatc accgggactt ttttatcaag ttcaggtttt
    12961 aaaagttcgc tattttgttc tagttctata gtgcatttta catatcttga gccactatcg
    13021 ctaagtagat ttagggtaaa aggatcaagt ggatacatag gacctatatt agcaaaatca
    13081 ctacctcgtt gagtaggagc tgaaacttta ggtttatcgg cttttgcttc ttcttttgga
    13141 gcttctttga cttcgctttc atcacttgaa ctgcttgaaa taagccaagc aatcactccc
    13201 ataatactaa gaagtaaaac aaaaagtaaa ataacaataa taattacaag tgaaccacct
    13261 tttttctttt tcgtttcttc gttttctaat tcttcatcca taaattttcc ttcatttagt
    13321 gaaattaatg taaaattgta gcaaaaattt cttttctatc caaatttgct ttagaaaaac
    13381 gataaattta ggtcaaagaa gagatgaatt tgaaggaaaa aaatgttaga tgtgattttt
    13441 agagaatatg atataagagg gctttatggc aaagaattaa atgaaaaaag tgttaaggct
    13501 ataggttttt gcttgggaca aaccatgcta aataaaggct gtaaaaatgt aagtgtgggc
    13561 tatgatgcaa gatatagtgc aaatgaactt tttaattatc tagtgagtgg acttaacaaa
    13621 gcgggaataa aaatctatga tatagggctt gtaccaactc cattgggata ttttagtctt
    13681 tatgagggct tgaaatttga tgcaaatgtt atgataacag gctctcataa cccaaaagat
    13741 tataatggtt ttaaaatcac tatcaataaa gaaagttttt ttggcgtgga attaaaagag
    13801 ttttcaaaag aagtttataa gcatttagat gatgatattg aagaaaattt agaagtagaa
    13861 aaatacgata ttttaagcct ttatgtgaaa tttatgtgcg agcaatttag ttttttaaag
    13921 gattttaatt ataaatttgg tgttgattgc acaaatggtg cggctggagt ggtgataaag
    13981 cctttaatca aggctttaaa tttaaaagct catgtaatgt ttgcaaagcc tgatggacag
    14041 tttccaaacc atgctccaga tcctacagaa gaagaaaact taagtgcgat tagagagttt
    14101 ttaaatcaaa atcaagatta ttctttagct tttgcttttg atggggatgc tgatagaatg
    14161 gttgctttga gtaaaactta tgtattttgt ggagatgagc tttgttattt gtttgctaaa
    14221 aatattccta atccacgcat tttaggtgag gtaaaatgtt ctaaaaatct ttttgatgaa
    14281 gtggctaaat ttggaactat ttttatggga aaaacaggac attctaatat caaaaaaatg
    14341 atgaaagaaa aagatattga tttagctgct gaagtgagtg gacatatttt ctttaaacat
    14401 agatattttg gttatgatga tggaatttac gcatttttaa gagccttaga acttgtttat
    14461 aaaggttttg atttagaaag tatgattaaa gctttaccaa aactttatac tacacctgaa
    14521 attaaaattc ctgtaaatga agaagaaaaa tttaaacttg tggaagaatt tcaaaaagag
    14581 attgaaaaag gagctttaaa aggtgttaaa agtctttgtg aaattgatgg agctaggata
    14641 gattttggcg atggatgggc tttgcttcgt gcatctaaca ccagccctta tcttatcaca
    14701 cgctttgaag caacttcttt agaaagagca aaagagcttg aaagtacggt atttagtttg
    14761 tttaatgaga taaaagctag gcttaagaat tgatgagata atatttcgcg atttaaattt
    14821 attttaaaaa ggaattaaaa atgaaaaaaa tacttgttct acttttgtta tgtgcgtttg
    14881 cttttggcgc aagtgaatgt gatagaaaaa ttgatcgtat caataaagaa atcagttttt
    14941 ctaaagcgca taatgataca gctagaactt taagcttaga gcttgcttta aaacaagtac
    15001 aaaatgattg tgctaaagat cctatgtttt atgataaaaa gttagaagct aaaaaactta
    15061 aagaacaaga agtagaaaaa atcgaaaaag aacttgatgc tttaaaagaa caaaaagatt
    15121 atatgagtaa ggctgagtat aaagctaaaa aagaagcttt aaaagaacaa aaagagaaaa
    15181 tcaaaaaaga aattaaagaa tatattgata atctctaaaa attaaaaggc taattaaatt
    15241 tagccttttt aaaccctacc ttttttaaga ttttctagta attcttctat attataaatt
    15301 cctctgtgtt ctggtgttaa aagatggatt aaaatatcac caagatcaat cacactccat
    15361 tcttcgctac tatctatgtt taaaaattcc tcacctttgg ctttaagttg tgttttaagc
    15421 tcatcgatca aggatagagc gtgtctttct cctaaagtag ctgcgataat gacatatttt
    15481 acaaagtatt cttgctcgct catgtcaatg gttttgatat cttcagcttt tttttcatct
    15541 aaaattttaa cgattaaatc tattctttct tgcattattg tcctttaatt tttgaaattg
    15601 tatcaatttt tttgtaattt ttcataatat ttttttactt catctttaat ttcttcgcaa
    15661 acttcatttg tatttaaagt gttgcgtatg aaagaagaag cgattttttt atcggttttt
    15721 aaatctttaa aattcttagg aatttctata tcattgcgat tagcaataac aaattctact
    15781 aaagaattaa gtttttcaaa atcatgccaa agatgaagtt tttctaaatg atctgcgcca
    15841 attaaaagat aaaatttact aggattataa agcttataaa gatacttaac actttctatg
    15901 ctaggaacag ggcgtttttg cctgatttca aaatcgcaaa tttcaacttt tggcaaatgt
    15961 ccccaaagtt ttttaaccca taagaatctt tgcttttcat cagcactaaa actttgttta
    16021 aaaggattga tataagtagg cataataata agtttatcaa tatctaattt ttccaaagcc
    16081 tctaaaacaa cgctattatg accattatgc ggtggatcaa aactgccacc aaaaagtgct
    16141 atcttcatta aaattttaac cttttttttg tagaatatta gcattatatt ttgcaaaagg
    16201 aaattaaatg gctgtaaaag ttgctataaa tggttttgga cgcataggca gatgtgttgc
    16261 aagaatcatc ttagaaagaa atgatattga gcttgtggcg ataaatgata ctacggatat
    16321 tgaacttaca aaataccttt ttaaatacga tacagtacat ggtgaattta aaggcagtgt
    16381 tgatagtgaa ggagatgatt tagtggtaaa tggtaaaaaa atcaaagtat ttaaaagtcg
    16441 caatgtaaaa gatcttgact ttgcaaaaca cggcgcacaa attgttttag agtgcacagg
    16501 agcgcattta actatggcaa aatgtcaaga atttatagat atgggagtac aaaaagtgat
    16561 catgagtgct cctgcaaaag atgatactcc tacttatgtt ttaggagtaa attcagaact
    16621 ttacaagggt gaaagcatta tttctaatgc aagttgtaca acaaattgtt taggtcctgt
    16681 ttgtcgtgtt ttacaagata attttggcat agaaaaagga cttatgacaa caatacatgc
    16741 ttatacaaat ggacaaagta ttattgatgc taaagctaaa gataaacgcc gttctcgtgc
    16801 tgcagcgcaa aatatcattc caacttctac aggcgcagca aaagctatga aacttgttat
    16861 gcctgaactt aatggcaagc ttcatggaca aagtatgcgt gtgccagtga ttgatgtatc
    16921 aagcgtggat ttaactgcac aactaagccg taaagttagc aaagatgaaa tcaatgaagc
    16981 tttcagaaaa gctgcagcta caaatttaaa aggcatttta atggtagatg atgatgaaag
    17041 agtttcaagc gattttatca cttgttctta tggagctatt gtagcaagtg atttaactca
    17101 agtgattgcg gatgatttta tcaaggtaat tgcttggtat gataatgaat ggggctattc
    17161 aagtcgtcta gtagatatgg cagtatatat tgcaaataag gcttaatcat gagtgatatt
    17221 atttctataa aagacattga tttagctaag aaaaaagttt ttataagatg tgattttaat
    17281 gttcctcaag atgatttttt aaatatcact gatgatagac gcataagatc agctattcct
    17341 acgataagat attgtttgga taatggttgt agtgtgattt tagcctctca tttagggcgt
    17401 ccaaaagaaa ttagctctaa atattcttta gaacctgtgg ctaagcgtct tgctagactt
    17461 ttagataaag aaattgttat ggcaaaagat gttatcggcg aagatgcaaa aaccaaagct
    17521 atgaatttaa aagcgggtga aattttactt cttgaaaatt tgcgttttga aaaaggcgaa
    17581 actaaaaatg atgaaaattt agccaaagaa cttgcttcta tggttcaagt ttatatcaat
    17641 gatgcttttg gagtatgcca tagagcacat tctagtgtag aggcgattac taaatttttt
    17701 gatgaaaaac acaaaggcgc aggattttta ctccaaaaag aaattgattt tgcaagcaat
    17761 cttatcaaac atccagcacg tccttttgtc gctgttgttg gaggttcaaa ggtaagtgga
    17821 aaacttcaag cattgacaaa tttattacca aaggtagata aattaatcat aggcggaggt
    17881 atggcattta cttttttaaa agctttaggt tatgatatag gaaattcact tttagaagaa
    17941 gaacttttag aagaagctaa taaaattctt accaagggta aaaatttagg agtgaaaatt
    18001 tatcttccag tagatgttgt agccgctcct gcgtgctcac aagatgcgcc gatgaaattt
    18061 gttccagcgc aagaaattcc aaatggttgg atgggtttag atataggacc tgcgagtgtg
    18121 agacttttta aggaggtgat ttctgatgcg caaacgattt ggtggaatgg acctatgggt
    18181 gtttttgaaa ttgataaatt ttcaaaaggt agcattaaaa tgagtcatta tatcagcgaa
    18241 ggacatgcaa cttctgttgt tggaggcggt gatacggctg atgtggttgc gcgtgcaggt
    18301 gatgcagatg aaatgacttt tatttctact ggaggtggtg cttctcttga acttatagaa
    18361 ggcaaagaac ttccaggtgt aaaagcttta agatctaagg aaaatgaatg atctttgctg
    18421 caaatttaaa atgcaatcac acaagagcaa gctttaaaat ttatgctaaa attttaaata
    18481 aaactatggg ggtaaaatgc gatgatatta tcgtttttcc acctagtata gcatttttag
    18541 aaaatgaaaa taacttcata caaggagcgc aaaattttta tccttgtgtt aatggtgctt
    18601 ttacaggcga gcttggaaaa gaacatttgg acgaatttgg gattaaatgt gtcttaatcg
    18661 ggcattctga aagaagagct ttaggagatg aagaatttat taaggctaaa tttgattttg
    18721 ctaaagagca tggttataaa attgtttttt gtataggtga aaatttagat acaaaaaatt
    18781 caggcaagac tttagagttt ttaaaaaaac aacttgaaat tattgattta aattatgaaa
    18841 aactcatcat cgcttatgag cctatttatt ctataggaac gggagtgagc gcacaaagta
    18901 cagatatcgc taaagtgctt gaatttttag cgagtttaac caaagtacct ttgctttatg
    18961 gtggaagtgt gaatgaaaat aatatcaaag aaattttaag tgtaaatcat tgtggtggag
    19021 ttttgatagg ctctgcagct ttaaaagtag aaaattttat aaaattaatc aaaggataaa
    19081 agatgattat gaagggtaaa aaaggcctta ttgtaggggt tgcaaataat aaatctattg
    19141 cttatggcat agcaaaagca tgttttgatc aaggagccga gcttgctttt acttttttaa
    19201 atgatgcttt aaaaaaacgc gtagaaccta tagcacaaga gtttaattct aattttgttt
    19261 atgagcttga tgtaaataat aacgagcatt tagattctat cgctgaaaaa atcaaaaaag
    19321 atttaggcga gattgatttt gtagtgcatg cggttgcttt tgctccaaaa gaagctttag
    19381 aaaattcttt tttagaaact tcaaaagaag cttttgatat agctatgcaa acttctgtgt
    19441 attctttact ttctttaaca cgtgcggttt tacctatttt aaaagataag ggttcgattt
    19501 tgactttaag ttatcttggt ggggttaaat atgtacctca ttataatgtt atgggtgtag
    19561 caaaagccgc acttgaaagt tctgtgcgtt atttagcaag agatctagga gtaaaaggaa
    19621 ttcgtgttaa tgctatttca gcaggtccta ttaaaacttt ggcagcaagt ggaatagggg
    19681 attttagaat gattttaaaa tacaatgaaa tcaattctcc tttaaaacgc aatgttagta
    19741 tagaagatgt aggtaattcg gctatgtatt tacttagcga tttagcaaat ggtgttacag
    19801 gtgaaataca ttatgttgat gcaggatata acatcatggg tatgggcgat gttgaaaaaa
    19861 atgaagaagg gcaaactgtt ctttgttggg ataatcaaaa aggataaaaa atggcaaagc
    19921 ttagcaatga agaattaaaa aatatacttg aagatcgcat taaaaaactt gagaattcta
    19981 ctttaaaaga ggacaaggtt atcaatgaag aaagtgtaaa aattcttgct aggcatttat
    20041 ctttaggcaa tgaaattcca gctcttgctc aaagattttt tcaaatcgca cctaaaacaa
    20101 agttagtatg gcttcatctt tgtgaatgta cagggtgtag cgagagtttg ttgcgttctg
    20161 agttgccaag ttttgatgag cttatttttg attttttttc tttagaatat catgaaactt
    20221 taatggcggc aaatggcact aaggctgaag agcttttaga gtatgtttta gaagaagatt
    20281 ttattttagc ggttgaaggt ggtgttgcag ccattgatac cttttttctt actataggag
    20341 cgcaaggaga gagtggctat gaaattttag aaaaactagc cgctaaagcc aaggctatct
    20401 ttgcagtggg tacttgttca agttatggtg gtattcaggc tgcttatcca aatcctagta
    20461 aaacttgtgg tattagcgaa gttttaagtc agaaagtagt aaatattcca ggttgtcctc
    20521 caagtgatat aaatatcatt gcgactttaa gtttttttgc tttatttgga gttttgcctg
    20581 aacttgatga gcaaaatcgt cctgtgtggg cttatggtaa atgtttgcat gatatgtgtg
    20641 aaagaaaggc gaaatttgaa agcgggattt ttgctgaaca ttttgacgat gaagctgcaa
    20701 agaatggagc ttgtttattt aagataggtt gtaaaggacc ttatacttac aacaactgtc
    20761 ctaaagtgaa atttaatgct aaaacttctt ggccagtggc tgcaggacat ggttgtatag
    20821 cctgtagtga gaaaaatttt tgggatgagt ttgggaatta tgaaaaacct atggcaaata
    20881 ttttttctta cgctaaactt tgcaatgaag agttaaaaca agaatttttt ctagaagagc
    20941 aaattaaaat tttagaacaa atagattttg aatttgaaag caatataaaa cttattttac
    21001 aaaatatagc taaaaataaa ttaggtgctt tgcttgtaga aaattataaa aaatcttttg
    21061 aaaaaaacta tgcttttata gaacaaaatt ttgatgaaaa tcctatgcct tcaaaagatt
    21121 tttggaaata tcttgagata agctttattt tagttaaagg cgcattttta aaagataaga
    21181 atgatttttt aattgtggca aaaaattacg cttttaaaca tgcaagtcct tatgatttta
    21241 agttaaatat gaacgctgaa aaaccaaagc ttgatgtgag taaatctttt cgtatgactt
    21301 taatctatct ttgcggtgga cttgattttg aaggtgttgc ttatagcatt ttaaaagctt
    21361 ttgaagataa tatcgctaaa atttcatcat taaaagcaag ttaatttaat aaaattttag
    21421 caatatgaag tcctataaaa gctactatat aagcacttgt acaggtaaaa agaaatagaa
    21481 agagagtgta ttttagcttt ccactttctt ttgaaaaaac tatagttgct gcaaagcaag
    21541 gattataaat cattacaaat aaaataaaag ccactgcact tggtataggt atgtttttag
    21601 cgataattcc ttttaaatca ttatttgttt catctacatc ttttcctagt gaataaagca
    21661 cgcccatagt tgagatcatc acttctttag cagccaaacc actgattaaa gatacgctta
    21721 atttccaatc taactcaagg ggttgaaaaa taggttctat gcctttgcca aattgtccta
    21781 aataactttg ttctatagct ctttcttgag cattaaaatc atttaaattt tcttcacttt
    21841 ttggaaaatt gctagcaaac catatgagca aagaggccaa aagtatgaaa gttcctgctt
    21901 ttttaagata cattttggct ttattataaa ccataaacca aactaaatgc caatttggca
    21961 tacgatattt tggcatttcc ataacaaaag gttcatcaag tccacgaaat gctgtcattc
    22021 ttaaaaattt tgcagcacaa agtcctaaaa tcgcacctaa aatataaatt ccaaaaagat
    22081 aatttcctgc tttttcactt ggaaaaaaag caccgataaa aagcacatat acaggaagtc
    22141 ttgctccaca actcataaaa ttgatcacaa aaagagttaa aagcctatct cttttgttct
    22201 taagagtgcg tgtagccata aaagcaggta ccgaacaacc aaaaccagtg attagcggaa
    22261 taaaactttt accatgcaaa ccaaatttat gtaaaatccc atcaagtaaa aaagctactc
    22321 ttgacatata gcctgtggtt tctaaaagag ctatgcctaa aaataaaatc attatattag
    22381 gcaaaaaaag tatcacagca ccaacacctg cgataatccc atcagccaaa gctgaagcga
    22441 taaaggtatt agaaatattg tttttaacaa attcacctaa ggtattaaag cccgattcta
    22501 tataatccat aggaatttgc cctaagctaa aggtgagttg aaataaaagc cacattaaaa
    22561 ataaaaatat aggtaagcca aagaatttat ggataagtaa ggcatcgatt tttttggtta
    22621 aatttctttc ttcttttttg tgtgtaataa ttttttttga aagttcatta ataaaatata
    22681 ataaatcttc tttttccgga cttttttcgc aaagcggagt gtaaaattga gatcttggaa
    22741 taaatttact ttcaaataaa ataataattt tttgcagcaa aagttctaaa ttttcttttg
    22801 tttttgctga aatttcaaca acttgacttt gaaattcttg gcttaaaata gaagtgtcaa
    22861 gctctatacc ttcttttttg gcttcatcgc acatatttaa agctaaaagc atttttttat
    22921 taaggcttaa aagttctgca ctaaggataa gattgcgttc taaattggta gcatctaaaa
    22981 cattaacaat aacatcatag tcattttgat ttaaaaaatg acgtgtgatt ttttcttctt
    23041 cgctatatcc atctaaagaa taagttcctg gcaaatcaat gacttcaaat tcatagtttt
    23101 tataaaaagt ttttgcgctt gctttttcta tagtaactcc gctaaaattt cctactttca
    23161 tattggcttt gcaaagtgca ttaataagaa gacttttgcc tacattaggc tgacctacaa
    23221 gagctatttt gatttttttc atataagatt cacttctatg gttttagctt catcagatct
    23281 taggataaca caacttgtat caagttctac cattatggtg gcatttttta aagaggagtg
    23341 aatttttttc aagtttttat ttttaataaa tccaaagctt aaaagtctat ttttgagttc
    23401 tttgtgagcg tttaaattga caataatagc cttttgtcca tcttttaact cgtttaaagt
    23461 cattgtaatt cctaaattaa taataaatat tataataaaa aagtgtaatg aaattatcct
    23521 tcttgtaaaa agaaggataa atatttaaaa agaaaagtgg tttaaatttt ctagattgat
    23581 gatttgatct agaattttgt tagctttagt attatcaagg taaatttgtg cattggctaa
    23641 aaatttagct tttaattctt caaaacttag tggattatca aaattacctt tattgataaa
    23701 aacatctttt tggattatgc gtccatcttg caaactggct tctaaatgcc ctggaaaata
    23761 ttttggaaag ccttgagatt tccttttttt gtaactgatt tttttagcaa attctagtac
    23821 ttcttcacgc tttaaatttt cataagattc aagagtgatt ttaccatcaa agaatcctag
    23881 agccattaaa aaaggcatgg aaaatttggc ctcataagca ctgtttggag tgtattttgc
    23941 ttctaaagga tcgcaaataa aagaaatagg aacttcatct acaaaacaac gaatgctttt
    24001 gatttcatct gcttttaagc catcattttt taaagctatg gcacaatcaa taagaccatg
    24061 agcaaaatgg cagcttggat aaggctttat agaaacttgc atactttgct aaatttcacc
    24121 caagccttta tcaagttctg ttttatcgca ttcttgttct ataccaaaac atttaaagat
    24181 attatcccta cctttaaaaa tgcttagagg ttcactcatg ttatttttag caaagttagc
    24241 gattaaaatt ccatttttaa tggcatttgc tatatgtaag acttttgaat tagagccatt
    24301 ggataagaac tcattaatcc cacttgcaaa acttccagca agtcctaaag cattgatgat
    24361 ttgttctttg ttaagatcca gcaagattgc acttgcactc acacttccaa aaattcctgc
    24421 aatagcagtg gtatgaaaac cacgcttatg aaaagtgcct ttgcttgcaa tgcctactct
    24481 agctgcaatt tcccagccta ttataaaagc tttgatgatt tttttcgcat ctttgctaac
    24541 atgaaaacca taacttaaac aaagaggagt taaaatcgca cttgcgtgca aaatagcttc
    24601 tgtatgcgta tcatcaaaat caagtgcatg agaagcaatg ccatttagca tggctgcata
    24661 aatgggatct aattttttat catgtaccca tacaggggta tttttttctg tgcttaaatt
    24721 ttcaaaagct ttaaaggcat ttaaaacgca ttcttcctta ctcgctgcta tagccgttcc
    24781 aaggctatca agcataagct ctttagctct ttgaacaact gtattaggga tattttcata
    24841 ctgaagattg aaaataaaat ccgccaaaat ttcgctatag aacatgattt ttcctatttt
    24901 aagatagcgc tatttttgat ttttgccaaa aattcatcta caagttttgg tgcatatcct
    24961 acataacttg ttgcatcaag taaagcatcg atatcttttt cttttaagac ttgagatact
    25021 cttgtatctg caagcaatac ttctttgaaa gttttttgtt gttcgatacc tagcatagcg
    25081 ttttcataaa cgatttcatg agcgtgttgt ttgccgtaat gatcgcttag tgcaaacata
    25141 acgcgttctg ccagtacaaa gcctttaaga gtgtcaagat ttttaagcat tttatctttt
    25201 ttaacttcta ggtcactaag agcaaatttc atatttgcta aaaccacaga aagcattaaa
    25261 aacatttcag gtaaaagttt ccattccatt ttccaaactt gcccatctct ttcatgctcg
    25321 tgtctttcaa tatcgcttaa aatggctaaa tttgccttaa aggcattgct tactgtaact
    25381 gcattttcgc ttactgcagg atttcttttg tgtggcatag tgctagatcc tacttgtcct
    25441 ttgccaaaag gttctgctac ttcatcgatt tcattgtgtg agagtatgag taattgatga
    25501 gcgattttgt taaaggttgc gttgatattg cctagtacaa aaccaagctc tataaagcga
    25561 tcacgtgtgc tctgccaaga gatattaggc acttcaagtc ctaaattctc taaagttagc
    25621 ttttctactt cgttgcattc atcgcttaaa ctcgccttgg ttccaacagc tcctactatg
    25681 ctgcctacat aaagtctttt ttcaagttca agtattcttt caaaatgacg atcaagctcg
    25741 ctaagccaga tggctacctt atgcccaaag gtgatcggta aagcttgtaa agcaagagtt
    25801 cttcccatca tagcagtgtt tttatgggtt ttagctagtt tcgctaaggc ttttgcgata
    25861 gcttttaatt cgctttttac aagagtcatt gcttctttaa attgtaaaac cagtcctgta
    25921 tcgatgatat cttgagtggt tactctaaaa tgtacatatt cgcctaaatt attatcgcaa
    25981 gctttttcta atcctcttac agtaggaact aaagggtgtt tggtcttttt aaattcagca
    26041 aagataaagt ccatatccat aaatttataa tgagcttttt ttgcgatctc atcagctgct
    26101 tttttaggga taattttaag ttttgcttgt gcttttgcta aagctgcttc aacatcgagc
    26161 catttttgta tgcggttttg ttcgcaaaaa atagcacgca tttcctgcgt gctccatgag
    26221 tctgctagta atctatgatc aaatacgcta attcctgtca tcttatctcc ttatttttta
    26281 atactatcaa aagcttgtgt taaatcagca attaaatctt tagtatcttc aagacctata
    26341 tgaaatctta caaatagccc tcttgcactt aggtctgttg cagttctagg cggagtagtt
    26401 acggtggcta agctttcata tccaccccag ctagcaccaa ttgaaaagta ttctagttta
    26461 tctacaaatt taatagcatc atctttgtta taaccttctg caaattctat ggtaatcata
    26521 ccatttgcac ctttatgatc acgcatgaaa atttcatgat ttgggtggga tttgagtttt
    26581 ggatagaaaa ttgttttaat ttcttttctg ctttgtaaaa actctacaat ttcatcagca
    26641 cttttttcat gagctttcat tcttacatct agtgttctca taccacgaag tactaagtaa
    26701 gcatcatcag gacttgttgt aaagcctaaa gcttctggaa gtttgtcaaa atttttccat
    26761 tctttttcgt tgattactac tatacccatg gttacatcag agtgtccact aagatatttt
    26821 gtagcggcga taactgaaat gtctactcca agttctaaag gatttagaaa atatccacta
    26881 gaataagtat tgtcaatagc tacagggata ttatatgcat gagcaatttt gcaaagtttt
    26941 ggtaaatcta tgatttcata aagtatagaa cctggacttt cgcataggat aagcttggta
    27001 ttaggtttga ttttttcttc tatatcactt gcatcagctt ttaaaaaatc aatttcaacg
    27061 cctattttgt ctaaaaataa ttcgcaaatc gttcttacag gcccataaat tgcatcagtg
    27121 attaaaaaat gtgcatcttt gcttgcatag tttaaaagta ccatggctaa tgctgcaagt
    27181 cctgttggaa aaagttgtgc tctataacca ccctctagag tgcaaataag tttttcaagt
    27241 tcaaaattgg ttgttgttcc tctagctcca tagcttaaaa cacgatctgt ttttcttaat
    27301 tctctgtatt tttccaagtt gcgtgatctt taaaaagtat ggttgatgca cgcataagtg
    27361 taggattgac tgatcttact tcagcacctt gatcgcctct gccacaatga ataagtttag
    27421 tttttgagtt cattttttct cctttttaaa gataaatata agtcataata acatttacaa
    27481 tagccgctac aagcatagga atagctgttc ttttaactac ggcaaaagga cttacttttg
    27541 caatagctga gatagctaag atcgctggtg caataggact aacacatctt ccaaagcccg
    27601 tcatgatttg aattggtgct atcatggtga tagtttcaac tccaaagtgt tttgctatat
    27661 ttgggataag tggagcaaag ctaaaaaatg ccgcatttcc tgaacccatt aagaaagcac
    27721 aaaccgcaag caagattgaa acggcgataa taatagccaa aactccaaat cctgcatttt
    27781 tgcaaaattc tattaaagta tctacaaaac ctacagataa aagaccactt gcaaatactt
    27841 gaccgcaaac gatgagtgaa actgtgataa caaataaatg tcccattcct ttaaagaaaa
    27901 tcataataga attaagagtt tctacaacgc ttttatagcg tatcatttca aaaataatag
    27961 ccacaaaagt tgaaatcacc attgcttact ggaacattca ttttaattgc agtgctagca
    28021 gctgctttaa cttcttgggc actacttatt cccattaaaa ccaagatgct atcaagcacg
    28081 gaactaaatc ctaggattaa aaccaaagga attataggta aaatcgcata aattctagga
    28141 ggctttttaa gttctttttc tttaccttca ttttcattta gttctttttc aatttcttgt
    28201 gcattgaagg caaaattatc ttttttgtca aaaaatttat tgcaaagata tatcgcaata
    28261 cctacagcta taatgatagg caaggttgta gggagttgat aatgaacaaa ataaattgca
    28321 ggatcaactt cagctacttt tgatgccatg atcacatttc cacttccagg tccatgatcg
    28381 atatattgac aaatcgcaat cacacttaag gcagaaagtt ttgaaacacc agaagtacaa
    28441 gtataggata catagtaacc ataagtaaaa gtgccaaacc tgcgtgagaa gggataaaaa
    28501 gaaccaaaaa ttgcacgata aaatatgcaa ctaaaagtaa gatataaggg gactttacca
    28561 tttttaaagg tttttcaaaa actttaaaga gtgtataaga agccccaaca tgatccatat
    28621 aagcagaaaa acctgctata gtcataagtg taagtccaag ccctactaat gtacttgaca
    28681 tggtttgatt gaaaacttga aaaatatcaa aaaaacctaa atttaaagaa cctttagcga
    28741 caatatgtgg agaaagtcca aaaagagcag ctaaggaaag taaaagtaaa ccacttaaaa
    28801 gcaatgccat gtgagcattg atttttttat aaagcataaa aacaagcaaa aaaacactaa
    28861 ataaagaaaa aacaatacct agcatgtttt atcctttttg agcgatgatc tctatctcta
    28921 ctttagcttt ttttggtaga tcttttaccg caaaagcact tcttgctgga taaggagctt
    28981 taaaaaattc agcataaatt tcattgaatg ctacaaaatc attaatatca gctaaaaagc
    29041 aagtggtttt aatcacttta tcataactga taccattttc ttctaagata gcaccgatat
    29101 tttttaaaga ttgtttggtt tgttctttga tatcagagct ttctatttct cctgaagcag
    29161 ggttgatagg aagttgtcct gatataaata aaagtccatt tacttctctg taagctgagt
    29221 atggaccaat ggcctttgga tagtttgaca tgaattctcc tttgttaaat atagattaag
    29281 cagaatgcat tttatcacta caataataat ttgtcaatag tttattatca taataataaa
    29341 attttatttt taagaaatgt tttaaagtat aaagagtaga atttaatatt atattaattt
    29401 tttattgaag gcagttttat ggatgaggga caaaaacaac aatttataaa gttgacatat
    29461 tttttaggag aagttttagg tgagcaatat gagatagttt ttcatgtaat tactgaagat
    29521 ggggcctata ttgcagcaat tgctaacagt catattagtg gaagaagttt agattctccc
    29581 ttgactgctt ttgcaagtga gcttatgcaa aataaaaaat atttagaaaa agatttttta
    29641 tgtgattata aggctcttgt tggaaaatca aaattaatta gaggatctac tttttttatt
    29701 aaaaatcatg acaaattagt aggtattttg tgtatcaatc atgatactag cattatgaga
    29761 gatttaatat gcaagatgat tgatttagaa aaaattggag atatgggtga tattttagga
    29821 aatattagtt tttctcaaaa tgattcaagt atagaaacat taagtcactc gatagaggat
    29881 attttagttc aaagcgtaga ttctagttat ttaaattctg attatcaatt aagcattact
    29941 caaaaagaag aaattgctga aaagctatat gaaaaaggta tttttaatat aaaaggggcg
    30001 gttcctatcg tagcaaaatt tttaaaaatt tcagaaccta gtgtctatag gtatctgaag
    30061 aaatttaaaa aataactaaa attttttgat aaattttagt atttttaggc ttattttctt
    30121 taaaaaatta tttttagatt ttttgagtaa aaattctgcc acatctttgc gtccaaacat
    30181 aatagcaaaa gtataaggtg tcattcctaa accattgttt tcatcaatat ttgctccata
    30241 tttaactaaa agttcacaca taggtaagta tcctttaaaa caaactcccg ctaatggggt
    30301 ttgtccacga tcgttttttt catctacttt tgcacctttt tctaaaagca ttttagcgct
    30361 ttcataagaa ttattataag ctgcaagcat aagcaagcta tcgcctttat gagtttttaa
    30421 atttacattt aaacctgctt ctatcatgat tttaagattt tcacattcat tatttcttgc
    30481 aaaattaaaa gccattttgc aaagctcttc aaatcttttt tcttcttcta aactaagagt
    30541 tgtcattgtt tttccttaat tattataatc tttagtttgc caccaaaagt ggcaagtaaa
    30601 aattattttt ctaaagcttt tttaattcct tttgcataat caggtgaaat tttttcaaaa
    30661 tgttttaaag ctctagtgat aattttttca tcaactcctt ccatagaagc ggcgatatta
    30721 tgaaaaagtt gagttttttg atcatcattc ataagattaa ataaagctct tggttgagta
    30781 taaaagtcat tatctagtgg agcatatctt tgtgctacgc cttctaagac taaatcaggt
    30841 tcaagatagc ttttgtcttc ttttgggcta ttatcatagc tgtttggttc ataataagca
    30901 gcatcatttt tataactatc aaaattcata gcaccagcga cattgtaagt attcacttcg
    30961 ctttttgcac gatttactgg taaaagatga taattagttc ctattctata tctttgtgca
    31021 tcaggatatg aaaaaattct agcttgcaac attttatcag ggctaaagcc aattccagga
    31081 acgatattgc ttggactaaa ggcagcttgt tcaacttcat taaaataatt ttgaggattt
    31141 ttgtttagaa tcatttcgcc tatatccatc aaaggtacaa aactatgagg ccaaattttt
    31201 gttaaatcaa aaggattaaa tccaagtttt tctatatctt tttcagcaag aatttgaact
    31261 tgaactttcc attttggaaa atctttattt tctatagcat tatagagatc tctttgatga
    31321 ctttctctat cttttgctat aagctcggca gcttcttggt tggtaagatt tttaatccct
    31381 tgttgggttt taaaatggaa tttcacccaa aatctttcat ttttatcatt aataaaacta
    31441 taagtatggc ttccaaatcc atgcatatga cgataacttg caggaattcc tctatcgctc
    31501 ataagaatgg ttacttgatg taaactttca ggacataaac tccaaaaatc ccaagcagca
    31561 ttattacttc ttagatgagt tcttggatct cttttttgag tatggatgaa atcagggaat
    31621 ttataagcat cgcggatgaa gaatgtcgga gtgttatttc ctaccaagtc ccagtttcct
    31681 tctttagtgt aaaatttaat agcaaaacct ctcacatcgc gttcagcatc tgctgcacct
    31741 gcttcacctg ctactgttga aaagcgtaaa aataatggag taacttcgcc tttttgaaaa
    31801 attttagctt tggtataagc acttaagtct gctgtaattt ttatttcgcc ataagctcca
    31861 cttcccttag catgaacggt tctttctgga attctttctc tattttgatg agcaagtttt
    31921 tcaagcaaaa gataatcttg cataagtaaa ggtccttttg cgcctgcgct taatgaattt
    31981 tggttatcag ctataatgtt tccaaaatcg ttagtcaatt ttttcatt
//
LOCUS       DAPIVO010000010        30624 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.010, whole genome shotgun sequence.
ACCESSION   DAPIVO010000010 DAPIVO010000000
VERSION     DAPIVO010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 30624)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30624)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30624
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.010"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            58..1035
                     /locus_tag="RJ239_000481"
     CDS             58..1035
                     /locus_tag="RJ239_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HDV7330621.1"
                     /translation="MLKRLALLIALSSLMLHASDLVKIYLNQGLDAVGVAIEKELTQK
                     DFWLSEIGDKNISLGYYDDNVAIVLTNKTDKILRVYSYEDGKIRKDFEQKEIITGLMG
                     DKKIEGDLKTPVGFYELGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYP
                     LDGSRLDEFKTRGCIALFNNNLEKFAKVVQDKKVFVMTEEKEKIRAKKDQIASLLADL
                     FTWKLAWTNSDTNAYLSFYDEQEFKRFDKMKFEQFASMKKSIFSRKEDKKIKFSDINI
                     SPYPNLENETMYRISFYEDYYTKNYRFRGDKILYVKIDSKGKMKILAEQ"
     gene            1036..2022
                     /locus_tag="RJ239_000482"
     CDS             1036..2022
                     /locus_tag="RJ239_000482"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HDV7330622.1"
                     /translation="MSLIKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLL
                     APLAKNLGVSFVAVKSEEEAREIEEFFENILILSHRPHGNENSRFIYALNDISQVKNY
                     KQDIKIHLKIDTGMHRNGICVENLEHAINLIQGSDLKLTGMFTHFASADEMDGSFFVQ
                     KENFQKAKKIVKKYFSNLLFHSYNSAALFRGKIPEDEYCRVGLVQFGYGDSNLKRVLS
                     LYAHRLSQRILQKGQSIGYGGIFTAAKDMEVATYDLGYADGLFRYNGRGELVLGNGKA
                     MLGKMSMDSFSCENSGEEICVFKDADIWADFFHTINYEILVKLNPNIQRVLV"
     gene            2025..2492
                     /locus_tag="RJ239_000483"
     CDS             2025..2492
                     /locus_tag="RJ239_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HDV7330623.1"
                     /translation="MFNIVLVHPRIPQNTGSIGRMCFNAGFKLHIVKPIVFDISQKAV
                     RRAGLDYWDKLEPIIWENLEEFLNENMIYKNRFFFATTKSQKAYFDAEFQKNDFLFFG
                     SESYGLPMELMQLNWENAITIPMKSYGRSLNLATSVGIISYEALRQNFRNFAS"
     gene            2596..4062
                     /locus_tag="RJ239_000484"
     CDS             2596..4062
                     /locus_tag="RJ239_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HDV7330624.1"
                     /translation="MNLDIMLDFANKASDIIANKIVPNTDIIMVVLLIVCGLYYSFLT
                     RFVQFRMLSSVFKILTEKNEGHAKEHISPFQALMISTASRVGIGNIAGISLALATGGA
                     GALFWMWVMAFFGGASAFAESTLAQVYKSKDDTGGFKGGPAYYIKKALGSHFFGAFFA
                     FILIITYAYGFNGLQSQTMTSSFKVYYDMFNPNAAVDFASSSWPMIIGIVLTIFGAWM
                     FFSHHTKIGKISSLIVPFMALAYVLLAVIAVLMNFDKIPSVIHMILQSAFDFKAIFGG
                     FAGSALVIGIKRGLFSNEAGMGSAPNAAAAALTSHPAKQGVIQAFSVLIDVVVCTSSG
                     FLVLFSMAYLGLGENKIDGGMPLVQEAMREYYGSFGIHFITIAIVLFAITSLIGNYYY
                     AQANVKYLTNSKFVMNLFRITAVAMIFIGSQMNLKLAWNLADLTMAFMATTNIISLLL
                     LGGIVNKVLKDFNTQQKSGIDPKFNASKLGIKNAECWD"
     gene            complement(4090..4818)
                     /locus_tag="RJ239_000485"
     CDS             complement(4090..4818)
                     /locus_tag="RJ239_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDV7330625.1"
                     /translation="MIEVKNLQKKYGELEVLKNINTTISKGDVIAIIGPSGGGKSTFL
                     RCINRLELADSGEILINKQNILDKEIDINKIRQKVSMVFQHFNLFANKNVMENLCLTP
                     IKTGILSQEEAIKKAKLLLAKVGLADKENIMPHKLSGGQKQRIAIARSLMMNPDVILF
                     DEPTSALDPEMIGEVLSIMKDVAKEGLTMLVVTHEMGFARNVANRIFFMDKGKIAVDA
                     SPKEVFENPSNERLREFLNKVLNH"
     gene            complement(4811..5554)
                     /locus_tag="RJ239_000486"
     CDS             complement(4811..5554)
                     /locus_tag="RJ239_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDV7330626.1"
                     /translation="MNQKNIRIFVFFVIIILWGYFSFPIEILKIQDPSGVASYGYTEN
                     AKAYLKSYLITLLLTACAVIIGVIIGFSLAILRFSKFKTLNFIIDEYIDIIRGTPVIL
                     QLMIFAFVIFTFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYK
                     TSMKEIILPQATKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNPKPI
                     IFTGLVYYVSVKIFSYFAKKLELRMNKND"
     gene            5637..5816
                     /locus_tag="RJ239_000487"
     CDS             5637..5816
                     /locus_tag="RJ239_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330627.1"
                     /translation="MLEFPKNKVVFMEILDFILIVIFVFLMIVLVIGFNHQMMQKNKE
                     REERFKKYKKGEQNE"
     gene            5809..6378
                     /locus_tag="RJ239_000488"
     CDS             5809..6378
                     /locus_tag="RJ239_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HDV7330628.1"
                     /translation="MSKKVLIPLAQGFEEAEFIGIADVLKRAKELNPDLEVVIASLNS
                     ELLVKGANSISIKADCSIEDVDIENLDAIALAGGFEGMMNLKNSNVILNIIKQLHSKN
                     KIVAAICASPIVLNEAGVLEGEFACYPSCEVGLNGNRVNKAVVVNKNVITSAGPATAI
                     LFGLELAKKLCGDEIYQKLYEGMLLPLTK"
     gene            complement(6408..6773)
                     /locus_tag="RJ239_000489"
     CDS             complement(6408..6773)
                     /locus_tag="RJ239_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HDV7330629.1"
                     /translation="MQEKTIFELIVEGKLPCNKVLESDDFLAFHDIAPKAPIHILIIP
                     KKYFKDFQEFDPELMAKMTSFIQELAVLLGVDKSGYRLVTNCGKNSGQEVFHLHFHML
                     GGFELPKEKTKKENPQALF"
     gene            6896..7888
                     /gene="pheS"
                     /locus_tag="RJ239_000490"
     CDS             6896..7888
                     /gene="pheS"
                     /locus_tag="RJ239_000490"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HDV7330630.1"
                     /translation="MQNFIEQIQKCENLNDLEAIRISVLGKKGILTEGFTKLKELEDE
                     AKKEFAAKLNAQKEIFNEAYLAKFKDLENLALEERMKQDALNFNYFDESITTGALHPV
                     MSTMDKIIEYFIALNFSIEKGPLIEDDFHNFEALNLPKSHPARDMQDTFYFDDKRLLR
                     TQTSPVQIRTMLAQKPPIRMIAPGAVFRRDFDITHTPMFHQVEGLVVEEGQKVSFANL
                     KSVLEDFLRYMFGDVKVRFRPSFFPFTEPSAEVDISCVFCKGKGCRVCKHTGWLEVLG
                     CGIVDPNVYNFVGYENVSGYAFGLGVERFAMLLHQIPDLRSLFEGDLRLLEQFR"
     gene            7885..10206
                     /locus_tag="RJ239_000491"
     CDS             7885..10206
                     /locus_tag="RJ239_000491"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HDV7330631.1"
                     /translation="MIITKSWLNDWLELEEISSDKIAKTLNSIGIEVDRVGALKAPDK
                     VVVGYVKEKIKHENSDKLSICQVDIGSETLQIVCGAANVDAGQFVAVATKGAIMSNGM
                     EIKEAKLRGVDSCGMLCSSLELGFEKINEGIMLLDESIGKLELGRPLNTYEIFNDELI
                     EVELTPNRGDCLSIYGIARDLAAALNLNLKEPKPFKESENVLGIGRILRLAAEKELNG
                     LYNYRAIGLKEEIQTNLLLSLRLAQIEGLGKNSIENLLNYATHSTGVLFNAYDLSSFS
                     EKDEEFTINLSKQVHGETKVSYKDKLLSFSGIFQNNESRCKDDSKIIIIEANYTDPLV
                     IADAKIYHKDQDEKMLYRSFRGSEPKLNLGMDFLLGIFEQIPNLVIYSSSQQILTDKE
                     LPIIPISIEGISDIIGQNVDKDEVLKILKKLGFELILSGEGLINVKAPLHRPDIKNLS
                     DICEEVVRIIGIDNIASKGLEFIEKNRLNSAYKNYIEFLNLRKRAVASGYFESLHYVL
                     DNGEELKRLGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKKIIKLFELG
                     AVFNVNNQELNRIAFIHSGLKEEAKISNKAKPESVQFYDFLLDIKNIIGDFKLKSSKY
                     NILSPYEQADIYLSDIKVGFIGRLHLKIENERDLPKTYICELDLDLIRQDFKIAKPYS
                     KFPAITRDLSVLIPKGFEYNQIKNCIEELNLEILENFRLVDIYSDENLKEFYSITISF
                     SFRDINKTLEDNQVNECMDKILNTLKNLGLDLR"
     gene            10203..11489
                     /gene="aroA"
                     /locus_tag="RJ239_000492"
     CDS             10203..11489
                     /gene="aroA"
                     /locus_tag="RJ239_000492"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HDV7330632.1"
                     /translation="MKIYKLQTPVNAILENIAADKSISHRFAIFSLLTQEENKAQNYL
                     LAQDTLNTLEIIKNLGAKIEQKDSCVKIIPPKEILSPNCILDCGNSGTAMRLMIGFLA
                     GISGFFVLSGDKYLNNRPMRRISKPLTQIGARIYGRNEANLAPLCIEGQKLKAFNFKS
                     EISSAQVKTAMILSAFRADNVCTFSEISLSRNHSENMLKAMKAPIRVSNDGLSLEINP
                     LKKPLKAQNIIIPNDPSSAFYFVLAAIILPKSQIILKNILLNPTRIEAYKILQKMGAK
                     LEMTITQNDFETIGEIRVESSKLNGIEVKDNIAWLIDEAPALAIAFALAKGKSSLINA
                     KELRVKESDRIAVMVENLKLCGVEARELDDGFEIEGGCELKSSKIKSYGDHRIAMSFA
                     ILGLLCGIEIDDSDCIKTSFPNFIEILSNLGARIDY"
     gene            11479..12312
                     /locus_tag="RJ239_000493"
     CDS             11479..12312
                     /locus_tag="RJ239_000493"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HDV7330633.1"
                     /translation="MIIELAKNYGFCFGVKRAIKKAEQIKDAATIGPLIHNNEEISRL
                     QKNFNVKTLENIQALSNEKKAIIRTHGITKQDLEELRKKDIEIFDATCPFVTKPQQIC
                     EQMSKEGYEVVIFGDENHPEVKGVKSYVSTKAYVVLDKKELQNIKLPNKIAVVSQTTK
                     KPEHFMEIVNFLILKTKEVRVFNTICDATFKNQDAIKELSLKSDVMVVVGGKNSANTK
                     QLFLIAKTNCEDSYLIETEEELKKEWFLDKKHCGISAGASTPDWIIQKVIAKIENFRI
                     N"
     gene            12444..14114
                     /locus_tag="RJ239_000494"
     CDS             12444..14114
                     /locus_tag="RJ239_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HDV7330634.1"
                     /translation="MSEVNKKVQDGVDDYLEEEDFGQLLEAFDKSREEATTEGVIVEI
                     KNDEVYVDIGKKSEGILALSEIQGDNSKLLFNVGDSIKVAVMGSRGGRSLLSHKKALR
                     KEKVIEFIKNYQENQDDIFTVKVVGKNKGGLIVVDENDVEFFLPKSQYGFKETNNIIG
                     KTFKVKIIKIDKDEQSIIVSRKKTLDDERRKRKELINNVAQQEDLIEGIVKKITTYGM
                     FVDVGGVDGLVHYSEISYKGPVNPGTLYKEGDKVPVKVIKYDKERKHLSLSIKAALPD
                     PWSEIKDTLDIGDTIKVIVSNIEPYGAFVDLGNDIEGFLHISEISWDKNIKNPKDYIN
                     KGQEIDVEVIEINPNERRLRVSLRNLLSRPFDEFMKSYKIADVVEGEITSVTSFGAFV
                     KLGGIEGLLHNEDASWDRNDKCKDKFSQGDKIKVKIIKIDEENQKISLSTKELSSSPV
                     QEYAKIHKVGDIVKGAIRDIKDFGVFVELSKNVDALIHKEDISTSMLENLKIGDDIEA
                     AIVFIDEKKNRIRLSVKNLVRIKEREVLNEINNDDKVTLGDIIKDQLA"
     gene            14114..14602
                     /locus_tag="RJ239_000495"
     CDS             14114..14602
                     /locus_tag="RJ239_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330635.1"
                     /translation="MKKYITISILSILLLILLAVVFTLLWQFKANVNFIPQFAKDTNT
                     QPSIQTQNQDLSWQEELAKWPTRDFTPAAEKFTLYFDADTSELKEKNKYYQLIVGKYD
                     IYSMFCLRQTLNSFNVKYFLLKSGHSPEIFLDTGNEKLIDDIIKELKKYKINTEVKEI
                     WL"
     gene            14599..16182
                     /locus_tag="RJ239_000496"
     CDS             14599..16182
                     /locus_tag="RJ239_000496"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HDV7330636.1"
                     /translation="MKKKIIVCDAILDKGVDILRKAEDIELIEAAKFPKDELMQMLSD
                     IEVAITRSSTDVDVNFLNHAKKLKALVRAGVGVDNVDIPECSKRGVIVMNVPTANTIA
                     AVELTMAHLLTSARSFVNAHNFLKIERKWEREKWYGIELMNKTLGVIGFGNIGSRVAI
                     RAKAFGMKILAYDPYISASKITDLDMEQAKNLDEILEKSDFITIHTPKTKETNGMIGK
                     QEIAKMKDGIRLINCARGGLYTEEALYEGLKSGKIAWLGIDVFDKEPATNHPLLDFEN
                     ISVTSHLGANTLESQDNIAREACEQALSAARGVAYPNALNLPIKTEDLPPFVAPYIEL
                     VSKMAFLAVQIDKNPIKSIKLEAEGIIGEYANSMLTFAAVGALGGILGEKINYVNAEF
                     VAKEKGVELSCETLPNSGYNNKLSVKIITENSNISVSGTVFNENEQRIVGLNGFKTDF
                     KPKGKMIIFKNKDIPGVIAKISSVLAAKNINIADFRLGRDGFGYALAVVLIDEKVQKE
                     VLDELKQLEACVFVQYVEI"
     gene            16169..16831
                     /locus_tag="RJ239_000497"
     CDS             16169..16831
                     /locus_tag="RJ239_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDV7330637.1"
                     /translation="MLKFKILIIEDDIDLNELLVLKLKSSGYEVISLADFFGVEDLLD
                     NEQIDLLIVDRNLPSGDSLEKIQDLREQGYKEAVIFLTAKALHQDLLEGFESGCDDYV
                     CKPFDFNELLLRIKAILKRHKKEEEKLSFGDFILDLVSYEFFYKNQKLEISNLDYELL
                     KCFFENPNTLLTRQFLSESVWKDDTTSDKTINIALTRLRNKFPKLKDHIISVRGIGYK
                     LC"
     gene            16825..18114
                     /locus_tag="RJ239_000498"
     CDS             16825..18114
                     /locus_tag="RJ239_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDV7330638.1"
                     /translation="MLKTKNIFIVFFVVLALIFGFIFYTFTNSYLNFLLIKQYEQKIK
                     SLDDVLKFSLLEHLNDANIKDFAKDTRADFIILNNDMKISSVKNPDFFSNLKEGEILN
                     FNSKKILTKSFIYKGYKYIIIVYPRFLDLELFWTKMAIGFGVCLLFVFILMLLLGRRI
                     EKNFNKILDFLDSIGDHKVVILEKGIFKEFNLLNEKLLKTKDKILKNTQKNKKQSDKI
                     TLKNTQLASVISAISHELKNPLSVIDLSLEMLKDEKLEDKKLKKELLEKISRQSVKLN
                     ALTHKLNFVFNLNSEALQMQEFDLFSLCEKITKNPGFERVALQGKSTKVKADEFLIEQ
                     VIINLLSNALKYSQKKVILTARDQKIIVQDFGKGIEEDKIKLITKKFYKIDVKSDNSF
                     GLGLFLVKKILNIHKSYLEISSTLGYGSSFSFKLSQG"
     gene            18118..20049
                     /locus_tag="RJ239_000499"
     CDS             18118..20049
                     /locus_tag="RJ239_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDV7330639.1"
                     /translation="MALIDLIEASKKFGDKIVLNEVNFSANEGEKIAIIGKNGEGKST
                     FLKTLLGALPLDSGRIIRQNGKSIAMLSQTVDFNANLSVKEAIKQELVEIYNTLEEYE
                     ILHKKLEEDPSNKDYLQKIDTLMTLIDSKDAWSIESKIIRVLKEFSLLEYENRIISTL
                     SGGEIRRVGLCILLLKNPDILLLDEPTNHLDVYMTSFLEELLKNSKMCVIFISHDRYF
                     IDAIAHKCVEVEQGKLSIFKGGYANYLEKKTQILQSLAKSHETLLKQLKSEEEWLRRG
                     VKARLKRNEGRKERIFKMREEAKKNPGAIKRLKLEISRAALNFNGEKTINRKKMLFEL
                     KNISKNINNKNLFKDFSTRILQGERIAIVGRNGCGKSTLLKILLGQIKQDSGEIKRGE
                     LKIGYFDQARSLVNSDKSLLEIFCPNGGDRVEVRGKNMHVYGYLKNFLFPKEFLDKSV
                     ALLSGGEKNRVALALLFAKEYDVLILDEPTNDLDIATINILEEYLLSFEGAILLVSHD
                     RYFVDKIATKLYAFEGNGYINILHTLYTEYLENEKEIEELDNFALELQTQEQNNNQKE
                     KSSKKLSYKENEILKNHPEKIDFLEQKIAKLNQDLSDPNVYQEIGINKLYQELEVMQK
                     ELEILENEYFLVLEKSENL"
     gene            complement(20080..20154)
                     /locus_tag="RJ239_000500"
     tRNA            complement(20080..20154)
                     /locus_tag="RJ239_000500"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(20120..20122),aa:Gly,seq:gcc)
     gene            complement(20165..20251)
                     /locus_tag="RJ239_000501"
     tRNA            complement(20165..20251)
                     /locus_tag="RJ239_000501"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(20215..20217),aa:Leu,seq:caa)
     gene            20432..22684
                     /gene="flgL"
                     /locus_tag="RJ239_000502"
     CDS             20432..22684
                     /gene="flgL"
                     /locus_tag="RJ239_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgL"
                     /protein_id="HDV7330640.1"
                     /translation="MRITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDAS
                     TYIDNTRLEYEIKTLEQVKESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSN
                     SQTSREAIAKELERIKESIVQLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINV
                     VTGAGTESPYNIPGWDLFFKADGDYKKQISTNVSFTDNRWDLNKDPDKTKYLTGDSKW
                     QQLIGQSYVKDNSLDADKDFEYDDSKLDFPPTTLYVQGTRPDGTSFKSAVLVKPEDTL
                     EDVMENIGALYGNTPNNKVVEVSMNDSGQIQITDLKQGNNKLDFHAVAFTPQADDKTE
                     LNNIIQAAQDEGITMEDVTNRVMTAALGNPNNGDITNLNNPVTIQINGQNFEIDLKQT
                     DFIKSKMTDTDGNAANGADYDNVYFEKNGNTVYGNVSQVIKGSNAYATDSTKLSEVMA
                     GDSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSYPDPNNPGQTISFPIMHTNPATGNS
                     GVVTGSNDITYGQINDIIGMFAADKIPTTTIQANNGQINNADYTQIQQLMKDSQATVD
                     VSMDYKGRISVTDKLSSGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSL
                     TIDEPNVDIIKDLDSMIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVSKLNT
                     TMGAYHNTIEGVNTRTSFLSVNIQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKASTT
                     ISQLSLLNYM"
     gene            22794..25634
                     /locus_tag="RJ239_000503"
     CDS             22794..25634
                     /locus_tag="RJ239_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsK"
                     /protein_id="HDV7330641.1"
                     /translation="MLAPGMGEWVYKANLFLFGEFAYYYPFFLFILNYVYYKRNYKLA
                     NFTRRELFGIGFAFFSSLLLFAVFYPNSGYILELAYAIFSTILGHTGSGIFALLLLLF
                     SLVLLFPKFAKEILKIELDFTYLLKVEQAFKSLLMRVFGGENEKEDVGKSEPIVPKLN
                     ILQDSIYGNLQINKKGETNNLEQIIKDSNINASKNSITTAKENFEKLKNQILDETIEI
                     DKQSLKESRSFVHEHSQQVRNFAQKASKMSISLDEDFNFISEEEVDMIPERFLKPKKL
                     EDIKQIDTNKNLDEPSYKRKNIEIPVSNQEVKPKIFTKELELRENLIKKEKLEQEYKA
                     YQNEILENKVKQEIKKLEEYDAINSSDIIEGNKYSFNSPKTIKTETEESDKINENKNL
                     DKADNIFEFAPIVEELNHPYIEPTPIKNINEIVIEEKNTLDFIQNTETKIDNEKTNDQ
                     EIKLQKAVLAKEIAINQALLREIEQGEIEKPKDFTLPPLDFLANPKEHKQEINESEID
                     KKIYNLLEKLRRFKIGGDVISTYVGPVVTTFEFRPSADVKVSRILNLQDDLTMALMAK
                     SIRIQAPIPGKDVVGIEVPNDEIQTIYLREILQSEVFKNAKSPLTIALGKDIVGNAFV
                     TDLKKLPHLLIAGTTGSGKSVGINSMLLSLLYRNSPKTLRLMMIDPKMLEFSIYNDIP
                     HLLTPVITDPKKAVNALSNMVAEMERRYRLMADAKTKNIENYNEKMKELGGEELPFIV
                     VIIDELADLMMTAGKDVEFYIGRLAQMARASGIHLIVATQRPSVDVVTGLIKANLPSR
                     ISYKVGQKIDSKVILDAMGAESLLGRGDCLFTPPGTSSIVRLHAPFASEFEIEKIVDF
                     LKDQQSVEYDESFLKDQQSVGVTTNESFDGEADELYEEAKRVILEDGKTSISYLQRRL
                     KIGYNRSANIIEQLTQNGILSEPDAKGQREIL"
     gene            complement(25720..25992)
                     /gene="rpsO"
                     /locus_tag="RJ239_000504"
     CDS             complement(25720..25992)
                     /gene="rpsO"
                     /locus_tag="RJ239_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HDV7330642.1"
                     /translation="MALDSAKKAEIVAKFAKKPGDTGSTEVQVALLTARIAELTEHLK
                     IYKKDFSSRLGLLKLVGQRKRLLSYLKRKDYNSYSKLITELNLRDK"
     gene            26167..26577
                     /locus_tag="RJ239_000505"
     CDS             26167..26577
                     /locus_tag="RJ239_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RrF2 family transcriptional regulator"
                     /protein_id="HDV7330643.1"
                     /translation="MLFTKASEYALLSLIYISQKETPQDVDSLALELDIPKSFLAKIL
                     QTLAKDGLLKSFKGAKGGFVLIKEPSQYTIKEIVNSAEKKDISVFECSGGTCPNNKEE
                     NCTLMPMLVNLQNKVDEFLDSITLEDIMKNNGKK"
     gene            26564..28738
                     /gene="flhA"
                     /locus_tag="RJ239_000506"
     CDS             26564..28738
                     /gene="flhA"
                     /locus_tag="RJ239_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HDV7330644.1"
                     /translation="MAKNKIVDLVFPFLGPLIAPVLKAKSLTIVGFLVCILAIIIVPL
                     PSPILDFFLALSIALSVLIILISIYIPKPTDLTTFPTLILIITLFRLSLNIATTRMIL
                     SEGQNGPEAVSEIIAAFGEFVVGGNMVIGVIVFCILVLINFMVVTKGSTRVSEVQARF
                     TLDAMPGKQMAIDADLNAGLIDEQTARARRQEVIAEANFYGAMDGSSKFIKGDAVAGI
                     IITIINIIGGFLIGSFQHDMALSDAASTYTILTIGDGLVSQIPGLITSTATAIIITRA
                     SKDEENFAEGTLTQLLSEYRTLLIVGFVLFIFALVPGLPTLSLGFMALVFLSLGYLTK
                     QVKEGKIDITTVKKSKPSAAVASQSGAGGTTAAPAKKSEEEILKEEEHKINDILKVEI
                     LELELGYGLIKLAENELTERIRSMRRSIAESLGFLMPKIRIRDNLRLKPNEYSFKLKG
                     VSIASAEIYPDKYLAMDSGFITEEIEGIATKEPAFNSDALWIDANLKDEATLNGYIVI
                     DPASVISTHMSELIKAHASELLTRQEVQNLLDKVKNDYPIIVEGALGVAPVSLIQKIL
                     KDLLKHHIPIKDMLTILESVSDIAEVSKSFDMIIEHVRASLARMITNMYLDDKGNLDI
                     FILDSASSAVLMENVQFRDGSYHLPLSVAQTGTLVDTLRAEVAAVANGRIKPFILCVE
                     PQLRKFIADICYNFSINIVVLSFAEIAENTNFNTEGIIRIEL"
     gene            28747..29793
                     /locus_tag="RJ239_000507"
     CDS             28747..29793
                     /locus_tag="RJ239_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HDV7330645.1"
                     /translation="MKIYHLSHTDLDGYACQFIVNFYFKNVRFYNSNYGKEINENFNS
                     IIGDIEKDENFGKAIILITDLNLNLNQCEEFEKICKEKNIKIFLLDHHQSGEECAQKY
                     SWYLLDSKRCATKIVYDFFSKICTPVLELSKFVDVVNAVDIWLSEDENFELGKVFLGL
                     IANAKEINRVMFKESQIDYMFFLLDKAWKFIGKENANILLDNATHFIKKDYFARKNDD
                     TLSNLISCFVVEKLSELKENFSIEYEGHKGILTSNIGNTSVIGNDFLVKNPDYDFFID
                     VSSRKTLSFRANGKIDVSLMAKNLVGGGGHKNASGGLFATFKDGANYNHIKAQIIDLI
                     KSKELKKENNESKQ"
     gene            29777..30019
                     /locus_tag="RJ239_000508"
     CDS             29777..30019
                     /locus_tag="RJ239_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330646.1"
                     /translation="MNQNNNKTLKNELEDLQYELSIVLEAMLLYAGVKRDKLENAIEA
                     YIDNIDNVLENSNKEGVDEILEVVEFLKNKYKDFFQ"
     gene            30016..>30624
                     /locus_tag="RJ239_000509"
     CDS             30016..>30624
                     /locus_tag="RJ239_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330647.1"
                     /translation="MKKCILIFFSLYSLSFANIYEKLNDFAYEKKPNKDFKIQDVKLV
                     QFSQENKDCLELLIEAGQVRILNSYNSCQKLSKDESFQKFLNEDFLKLYKNNGYLINE
                     NLQNLKNTMQDIMIYYKLRYSFSKDVKDMSKNKNLDILNIDEKDGGTLLYKINNQACV
                     GIELTRHDSRMAMKIYGIENLDKECKLFIQSPSFKDLSYTKKD"
BASE COUNT        11302 a         3810 c         5341 g        10171 t
ORIGIN      
        1 atattataat cacaaacatt tttgacttaa aaaatttgaa atacctaagg aaaaacattg
       61 ttaaaacgac ttgctttatt aattgcactt tcttcattga tgttgcatgc ctcagatctt
      121 gttaaaattt atcttaatca aggattagat gctgttggtg tagcgattga aaaagaatta
      181 actcaaaagg atttttggtt aagtgaaata ggagataaaa atatttcact tggatactat
      241 gatgataatg ttgctatcgt gcttacaaat aaaacagata aaattctccg tgtttattct
      301 tacgaggacg gaaaaataag aaaagatttt gaacaaaaag aaataataac tggattaatg
      361 ggtgataaaa aaatagaagg agatttgaaa actccagtag gtttttatga gttaggccgt
      421 aagtttaatc caggtgatcc ttattatggt ccctttgctt ttgccacaac ttatccaaat
      481 ttacttgata aagtacaagg aaaaacaggt ggtggtattt ggatccatgg ctatccttta
      541 gatggttcta gacttgatga atttaaaaca agagggtgta ttgctttatt taataataat
      601 ttggagaaat ttgcaaaagt tgtgcaagat aaaaaagttt ttgttatgac agaagaaaaa
      661 gaaaaaatta gagctaaaaa ggatcaaatc gctagtttat tggctgatct ttttacatgg
      721 aaactagctt ggacaaatag tgacactaat gcctatttaa gtttttatga tgagcaagaa
      781 tttaaacgtt ttgataaaat gaaatttgaa cagtttgctt ccatgaaaaa atctattttt
      841 tctcgtaaag aagataaaaa gattaaattt tcagatatta atatcagccc ttatccgaat
      901 ttagaaaatg aaactatgta tagaatttca ttttatgagg attattacac taaaaactat
      961 cggtttagag gcgataaaat tttatacgtt aagatagata gtaaaggtaa aatgaaaatt
     1021 ttagcagagc aataaatgtc tttaataaaa attgatcaaa aagcttatga atacaattta
     1081 agacatattg ctaaaaaaat agggagtttt caaagattaa tttgtgtttt taaagataat
     1141 gcatatggac atggagctaa gcttttagct ccattagcca aaaatttagg agtttctttt
     1201 gttgctgtta agagtgaaga agaagctcga gaaatcgaag aattttttga gaatatatta
     1261 atactatcac atcgtcctca tggtaatgaa aattctcgat ttatttatgc tttaaatgac
     1321 atttctcaag taaaaaatta caagcaagat ataaaaatac atctaaaaat agatacaggc
     1381 atgcatcgca atggaatttg tgtagaaaat ttagagcatg ctataaatct tattcaaggt
     1441 agtgatttaa aacttactgg aatgtttaca cattttgcta gtgcagatga aatggatgga
     1501 agtttttttg ttcaaaaaga aaattttcaa aaagctaaaa agatagtaaa aaaatatttt
     1561 tcaaatttat tatttcattc gtataattct gcagcattat ttagagggaa aattcctgaa
     1621 gatgaatatt gtagagttgg gcttgttcaa tttggatatg gggattcaaa tttaaaaaga
     1681 gttttaagtt tgtatgctca tagattaagt caaaggattt tacaaaaagg acagagcata
     1741 ggatatggag gcatttttac tgctgcaaag gatatggaag tagcaactta tgatttgggt
     1801 tatgctgatg gtctttttcg ctacaatgga aggggggagt tagtgcttgg aaatggaaaa
     1861 gcaatgcttg gaaagatgtc aatggatagt ttttcttgtg aaaattctgg tgaggaaatt
     1921 tgcgtgttta aagatgctga tatttgggct gatttttttc atactattaa ctatgaaatt
     1981 ttagtaaaat taaatcctaa tattcaaaga gttctagtat aaatatgttt aatatagttt
     2041 tagttcaccc tagaataccg caaaatacag gtagtatagg tagaatgtgc tttaatgctg
     2101 gttttaaact tcatattgtt aaaccaattg tttttgatat ttcacaaaag gctgttagaa
     2161 gggcaggact tgattactgg gataaattag agcctattat ttgggagaat cttgaagaat
     2221 ttttgaatga aaatatgatt tataaaaatc gctttttttt cgcaacaact aagagtcaaa
     2281 aagcttattt tgatgcagaa tttcaaaaaa atgatttctt attctttgga agtgagagtt
     2341 atggtttgcc tatggaatta atgcaattaa attgggaaaa tgctataact atacctatga
     2401 aatcttatgg aagaagttta aatttagcca caagcgttgg tataatctct tatgaagctt
     2461 taagacaaaa ttttagaaat tttgcttctt aaaagtttca aatttacaca atagcttaaa
     2521 acaaataaaa tcataaagtc ctttttataa aaattatgtt aaagtaaaat ttagattatt
     2581 ttttgaggag tttagatgaa tttagatatt atgctagatt ttgccaataa agcgtctgat
     2641 attatagcta ataagattgt cccaaataca gacattatta tggtagtttt acttattgtt
     2701 tgtgggcttt attatagttt tttaactcgc tttgttcagt ttcgtatgtt gagttctgta
     2761 tttaaaattc ttacagaaaa aaacgaagga cacgctaaag aacatatttc accttttcaa
     2821 gcattaatga tctcaactgc ttctagagtt ggtataggaa atattgctgg aatttctttg
     2881 gcattggcta caggtggagc tggtgcttta ttttggatgt gggttatggc attttttggt
     2941 ggtgcctcag catttgctga aagtacctta gctcaagttt acaaatcaaa agatgataca
     3001 ggcgggttta aaggtggtcc agcttattat ataaaaaaag ccttaggctc acattttttt
     3061 ggagcttttt ttgcttttat tcttattatt acttatgctt atggatttaa tggacttcaa
     3121 agtcaaacaa tgacttcgtc ttttaaagtt tattatgata tgtttaatcc aaatgctgct
     3181 gtagattttg catcaagttc ttggccaatg attattggta ttgttttaac tatttttggt
     3241 gcatggatgt ttttttctca ccatactaaa ataggtaaaa ttagttcttt aattgttcct
     3301 tttatggctt tagcttatgt tttacttgcc gtgattgctg ttttaatgaa ttttgataaa
     3361 attccttctg tgattcatat gattttacaa agtgcttttg attttaaagc gatttttggt
     3421 ggttttgctg gttctgcttt ggttataggg attaaaagag gacttttttc aaatgaagcg
     3481 ggtatgggct cggcacctaa tgcagctgca gcagctttga caagtcatcc agctaaacaa
     3541 ggtgttatac aagccttttc agttttaatt gatgttgttg tttgtacaag ttctggattt
     3601 ttagttcttt tttctatggc atatttagga cttggagaaa ataaaattga tggtggaatg
     3661 cctttagttc aagaagctat gcgtgagtat tacggtagct ttggaatcca ttttattact
     3721 atagctattg ttctttttgc aataacttct ttaataggaa attattatta tgctcaagct
     3781 aatgttaaat atttaacaaa ttccaaattt gtaatgaatt tgtttagaat tacagctgtg
     3841 gctatgattt ttataggctc gcaaatgaat ttaaaacttg cttggaattt ggctgatttg
     3901 actatggctt tcatggcaac gacaaatatt atatctttat tgcttttagg tggtatagta
     3961 aataaagttt taaaagattt taatacgcaa caaaaatctg gtatagatcc taaatttaat
     4021 gctagcaaac ttggaattaa aaacgctgaa tgttgggatt aaaattcata agccttagtg
     4081 gcttatgaat taatgattta aaaccttgtt taaaaattct ctcaatcttt cattgctagg
     4141 attttcaaat acttctttag ggcttgcatc aacagcaatt tttcctttat ccataaaaaa
     4201 tatacgattg gcaacatttc tagcaaagcc catttcatga gttactacaa gcatagttaa
     4261 accttctttt gcaacatctt tcataatgct tagaacctcg cctatcattt caggatctag
     4321 agctgaagta ggttcatcaa ataaaataac atcaggattc atcatcaagc ttctagcaat
     4381 agctatgcgt tgtttttgtc caccagagag cttatggggc attatatttt ctttgtctgc
     4441 taaacccacc ttagcaagaa gtaattttgc tttttttatg gcttcttctt gacttaaaat
     4501 tcctgtttta attggtgtta aacataaatt ttccataaca tttttattag caaaaagatt
     4561 aaaatgctga aataccatgc taactttttg cctgatctta ttaatatcaa tttctttatc
     4621 aagtatgttt tgcttattga ttaaaatttc cccactatca gctagttcta agcgattgat
     4681 gcagcgtaaa aatgtacttt ttccgcctcc acttggacct atgatagcta ttacatcgcc
     4741 ttttgagatt gtagtgttaa tattttttaa aacttctaat tctccatatt ttttttgtaa
     4801 atttttaact tcaatcattt ttattcatcc taagttcaag tttttttgca aaataactaa
     4861 aaatttttac acttacataa taaacaagtc cagtgaaaat aataggcttt ggattgtaaa
     4921 gtacggcttg caagctttga ctttgcatgg taatatcaat aacactaata aatcctacaa
     4981 cagaagtttc cttaaataaa gaaataaatt cattagctaa tgcaggtaga atgtttttag
     5041 tagcctgagg aagaataatt tctttcattg aagttttgta atcaagtccc attgctcttg
     5101 cagcttccat ttgtccttta tctacactat taatgccact tcttacaatt tctgctatat
     5161 aagccgagct attaagtcct agtgcaagaa tggctgcata aaggttgtct ataaaagtaa
     5221 aaattacaaa agcaaaaatc atcaattgta aaattaccgg tgttcctcgt ataatgtcta
     5281 tatattcatc tataataaaa ttaagtgttt taaatttaga gaagcgtaaa atagctaagc
     5341 taaaaccaat aatcactccg ataataacag cacaagcagt taataaaagc gtaataagat
     5401 aactttttaa ataagctttt gcattttctg tatagccata gcttgcaact ccactaggat
     5461 cttgaatttt taatatttct atcgggaaag aaaaatagcc ccataaaata ataataacaa
     5521 aaaaaacaaa aattcttata tttttctgat tcaatttgta aaccttttca gagaaattat
     5581 ttaaaaaaag attttataga aatatctttg aattttctct aaagatttaa aaaaatgtgt
     5641 tagaatttcc caaaaataag gttgtattta tggaaatttt agatttcatt ctaatagtta
     5701 tttttgtgtt tttaatgatt gttttggtta taggtttcaa tcatcaaatg atgcaaaaaa
     5761 acaaagaaag agaagaaaga tttaaaaaat ataaaaaagg agaacaaaat gagtaaaaaa
     5821 gtattaattc cattggctca aggttttgaa gaagctgaat ttataggaat tgcggatgtt
     5881 ttaaaacgag caaaagaatt aaatccagat ttggaagttg ttatagcttc gttaaacagt
     5941 gagttattgg taaaaggtgc taatagcatt agtataaaag cagattgttc tatagaggat
     6001 gttgatatag aaaatttaga tgctattgct ttggcgggtg gctttgaagg tatgatgaat
     6061 cttaagaatt caaatgttat tttaaatatc attaaacaac ttcatagcaa aaataaaatt
     6121 gttgccgcaa tctgtgcttc tcctatagtt ttaaatgaag caggtgtttt agagggcgag
     6181 tttgcttgtt atcctagttg tgaagttgga cttaatggaa atcgtgttaa caaggctgta
     6241 gttgtaaata aaaatgttat aacttcagca ggtccagcta cggcaattct ttttggttta
     6301 gaactagcta aaaagttatg cggtgatgaa atttatcaaa aattatacga gggaatgttg
     6361 ctacctttga caaaatagtt taaatggtag tttttctacc atttaaatta aaataaagct
     6421 tgaggatttt cttttttagt tttttcctta ggcagttcaa aacctccaag catatgaaaa
     6481 tgcaaatgaa aaacttcttg tccactattt tttccacagt ttgttaccaa gcgatatcca
     6541 cttttatcta cacctaaaag aacagctaat tcttgtatga aacttgtcat tttggccata
     6601 agttcaggat caaattcttg aaagtcttta aaatattttt tagggattat aagtatatgt
     6661 atgggtgctt tgggtgcaat atcatgaaat gctagaaaat cgtcactttc aagcacttta
     6721 ttgcatggaa gtttaccttc aactatgagt tcaaaaattg ttttttcttg cattatttat
     6781 ccttttttat tgttggtttg atacaattat atctttaaag tttggttttt atgctgaatt
     6841 taaaatagtt tttaatagaa ttagaacttg aaatatttta tttaaggtaa gaaaattgca
     6901 aaattttata gaacagattc aaaaatgtga gaatttaaat gatttggaag ccattaggat
     6961 ttccgttctt ggaaaaaaag gtattttaac agaaggcttt acaaagctta aagagttaga
     7021 agatgaggcg aaaaaagaat ttgctgctaa attaaatgca caaaaagaaa tatttaatga
     7081 ggcttattta gccaaattta aagatttgga aaatcttgct ttagaagaaa gaatgaaaca
     7141 agatgcttta aattttaact attttgatga aagtattaca acaggtgcct tgcatcctgt
     7201 tatgagcacc atggataaaa tcatagaata ttttatagct ttgaatttta gcatagaaaa
     7261 agggccttta atagaagatg actttcataa ttttgaagcg ttaaatttac ctaaatctca
     7321 ccccgcaaga gatatgcaag atacctttta ttttgatgat aaaaggcttt taagaacaca
     7381 aacttcgcca gtgcaaatac ggacaatgct tgcacaaaaa cctcctatta ggatgatagc
     7441 ccctggtgct gtatttagaa gagattttga tattacgcat actcctatgt ttcatcaagt
     7501 tgaaggcctt gtggtggaag aagggcaaaa ggttagcttt gcaaatttaa aaagtgtatt
     7561 ggaagatttt ttgcgttata tgtttggaga tgtgaaagtt cgttttcgtc caagtttttt
     7621 cccatttaca gaaccttctg ctgaagttga tatttcttgt gtattttgca aaggaaaggg
     7681 ttgtagagtt tgcaaacata caggttggct tgaagtttta ggatgtggaa tagttgatcc
     7741 taatgtttat aattttgttg gttatgaaaa tgtaagtggt tatgcttttg gattgggagt
     7801 agaacgtttt gcaatgcttt tgcatcaaat tccagattta agatctttat ttgaaggtga
     7861 tttgagatta ttggagcagt ttagatgata attactaaaa gttggttgaa tgattggtta
     7921 gaacttgaag aaataagttc agataaaata gctaaaactt taaactctat aggtatagaa
     7981 gttgataggg ttggcgcttt aaaggctcca gataaagttg ttgtaggcta tgttaaggaa
     8041 aaaattaaac atgaaaattc agataaatta agcatttgtc aagttgatat cggaagtgaa
     8101 accttgcaaa ttgtctgcgg tgctgcgaat gttgatgcag gacaatttgt agctgttgca
     8161 actaaaggtg ctatcatgtc aaacggtatg gaaataaaag aagcaaaatt gcgaggagtg
     8221 gattcttgtg gtatgctttg ttctagttta gaactgggtt ttgaaaaaat caatgaagga
     8281 attatgcttt tagatgagag tatagggaaa ttagaacttg ggagaccttt aaatacttat
     8341 gaaattttta atgatgagct aatagaagtg gaacttactc ctaatagggg tgattgttta
     8401 agtatttatg gtatagctcg tgatttagcc gcagctttaa atttaaattt aaaagaacca
     8461 aaaccattta aagaaagtga aaatgtttta ggtatcggta gaattttgcg cttagcagct
     8521 gagaaagaac ttaatggact ttataattat cgagccatag ggctaaaaga agaaattcaa
     8581 acaaatttat tgcttagttt aagacttgct caaattgaag gtttgggaaa aaattccata
     8641 gaaaatttat taaattatgc aacgcattca actggtgttc tttttaatgc ttatgattta
     8701 agtagttttt ctgaaaaaga tgaagaattt accattaatt taagcaagca agtgcatgga
     8761 gaaacaaaag tatcttacaa agataaactt ttaagcttta gcggaatttt ccaaaataat
     8821 gaaagtagat gtaaagatga ttctaaaata attattattg aggctaatta taccgatcca
     8881 ttggtaattg cagatgctaa aatatatcat aaagatcaag atgaaaaaat gctttataga
     8941 agttttaggg gaagtgaacc taaattaaat ttaggaatgg attttttgct tggtattttt
     9001 gagcagattc caaatcttgt tatttatagt tcttctcaac aaattttaac tgacaaagaa
     9061 ttaccaatca taccaataag tattgaaggt attagcgata taataggaca aaatgttgat
     9121 aaagatgaag tattaaaaat attaaagaaa ttaggttttg agctcatact ttcaggtgaa
     9181 gggcttataa atgttaaagc acctttacat cgtcctgata ttaaaaattt atcagatatt
     9241 tgcgaggaag ttgtaagaat tataggtatt gataatattg cttccaaggg tttagaattt
     9301 atagaaaaaa atcgtttaaa ttctgcatat aaaaattata ttgagttttt aaatttaaga
     9361 aaaagagcag tagctagtgg ttattttgaa agcttacatt atgttttgga taatggagaa
     9421 gaacttaaaa gattaggttt tgactctgtt aaattaaaac taatcaatcc aattacagca
     9481 gaacttaata ctttaagaac aaccctttta aatcatttgt taaatgcagc aagtttaaat
     9541 gcaaaaaatt ctaaaaaaat tattaaactt tttgaattag gggctgtttt caatgttaat
     9601 aatcaagaat taaatcgtat tgcatttatc cattctggct taaaagaaga agctaaaatt
     9661 tccaacaagg ccaaacctga atcggtgcaa ttttatgatt ttcttttaga tattaaaaat
     9721 attataggtg attttaaact aaaatcatca aaatataata ttttaagccc ttatgaacaa
     9781 gcagatattt atctatcgga tattaaagta ggttttatag gccgtttgca tttaaaaata
     9841 gaaaatgaga gagatttacc aaaaacatat atttgcgaac ttgatttaga tttaatcagg
     9901 caagatttta aaatagctaa gccttactcc aaattcccag ctatcactag agatcttagc
     9961 gtgttaatac ctaaaggttt tgaatacaat cagattaaaa attgtatcga agaattgaat
    10021 ttagaaatac ttgaaaattt tcgtttagtt gatatttata gtgatgaaaa ccttaaagaa
    10081 ttttatagca ttactataag tttttctttt agggatataa ataaaactct agaagataat
    10141 caagtgaatg aatgtatgga taaaatttta aatactctta aaaatttggg tcttgattta
    10201 agatgaaaat ttacaaattg caaacccctg taaatgctat acttgaaaat atagcagcag
    10261 ataaaagcat atctcatcgt tttgctatat tttcgctttt aacacaagaa gaaaataagg
    10321 ctcaaaatta tctcttagct caagatactt taaacactct tgaaattata aaaaatcttg
    10381 gagctaaaat tgaacaaaaa gattcttgcg tcaaaattat accccctaaa gaaattttat
    10441 ctccaaattg tattttagac tgtggaaatt caggaactgc tatgcgtttg atgataggat
    10501 ttttagcagg aatttctggt ttttttgttt taagtggaga taagtattta aacaatcgtc
    10561 ctatgagaag gataagcaaa ccacttactc aaataggcgc tagaatttat ggaagaaatg
    10621 aggcaaattt agctccactt tgtatagaag gtcaaaaatt aaaagctttt aattttaaaa
    10681 gcgaaatttc ttcggctcaa gttaaaacag ctatgatttt atctgctttt agggctgata
    10741 atgtatgcac ttttagtgaa atttctctta gtcgaaatca tagtgaaaac atgctaaagg
    10801 ctatgaaagc tccaataagg gttagtaatg atggcttaag tcttgaaata aatcctttaa
    10861 aaaaaccttt aaaagctcaa aatataatca ttcctaatga tccttcttcg gctttttatt
    10921 ttgttttagc agctattatt ttacctaaat ctcaaattat tttaaaaaat attttgctta
    10981 atcctactcg tatagaggcg tataaaattt tgcaaaaaat gggtgccaaa cttgaaatga
    11041 caataactca aaatgatttt gaaactattg gtgagatcag ggtggagtct agcaagctta
    11101 atggcataga agttaaagat aatatcgctt ggttaataga tgaagcgcct gctttggcta
    11161 tagcttttgc tttggctaag ggtaaatcta gtttaataaa tgctaaagaa ttacgcgtta
    11221 aagaaagcga taggattgct gtgatggttg aaaatctaaa gctttgtggt gttgaagcta
    11281 gagaacttga tgatggtttt gaaatagaag gtggatgcga actaaaatct tcaaaaatta
    11341 aaagctatgg agatcaccgt attgctatga gttttgctat tttaggtttg ctttgtggaa
    11401 tcgagattga tgatagtgat tgtataaaaa cttcttttcc aaattttata gagattttat
    11461 caaatttagg agctaggatt gattattgaa ttagcaaaaa actatggttt ttgttttggt
    11521 gttaaaagag ctattaaaaa agcagaacaa ataaaagatg ctgcaactat aggccctctt
    11581 attcacaata acgaagaaat ttctcgtttg caaaaaaatt ttaatgtcaa aactttggaa
    11641 aatatacaag ctttaagtaa tgaaaaaaag gctattataa gaactcatgg tattacaaag
    11701 caagatttag aagaattgag aaaaaaagat atagaaattt ttgatgccac ttgtcctttt
    11761 gttacaaaac cacaacaaat ttgcgagcaa atgagtaagg agggttatga agttgttatt
    11821 tttggagatg aaaatcatcc cgaagttaaa ggagtcaaaa gttatgtaag tacaaaagct
    11881 tatgtagttt tggataaaaa agaacttcaa aatataaaac ttcctaataa aatagctgta
    11941 gtaagccaaa caactaagaa gcctgagcat tttatggaga tagtaaattt tttaatactt
    12001 aaaaccaaag aagtaagagt ttttaacact atatgtgatg caacctttaa aaatcaagat
    12061 gccattaaag aactctcgct taaaagtgat gttatggttg ttgtaggggg taaaaactca
    12121 gccaatacaa aacaactttt tttgattgca aaaaccaatt gtgaagatag ctatctaatt
    12181 gaaaccgaag aagagttaaa aaaagaatgg tttttagata aaaaacattg tggcattagt
    12241 gcaggtgcta gtactcctga ttggattata caaaaagtta tcgccaaaat agaaaatttt
    12301 agaattaatt aaaaaatgtt tttaaataga ataaaaaagt caaaaattta aaaaaaatta
    12361 acaaaaataa aaaaacttaa cactaattaa agaaaaataa ggtaaaatca atcaatttct
    12421 aaaaattatt ttaaaggacc ataatgagcg aggtgaacaa aaaagttcaa gacggcgtag
    12481 atgattatct tgaggaagaa gattttggac agcttttaga agcttttgat aaatcaagag
    12541 aagaggctac aacagagggt gtgattgtag agatcaaaaa tgatgaagtt tatgtagata
    12601 taggtaaaaa atctgaaggt attttagctc ttagcgaaat acaaggtgac aattctaagc
    12661 tattgtttaa tgtaggtgat agtattaaag ttgctgttat gggttctcgt ggtggcagat
    12721 ctttactttc tcataaaaaa gctttgagaa aagaaaaagt tattgaattt attaaaaact
    12781 atcaagaaaa tcaagatgat atttttaccg taaaagtagt tggaaaaaat aaaggcggat
    12841 tgatagttgt tgatgaaaat gatgttgaat ttttcttacc aaaatctcaa tatggcttta
    12901 aagaaacaaa taatattata ggcaaaacgt ttaaagttaa aattattaaa atcgacaaag
    12961 atgagcaaag tatcattgtt tctcgtaaaa aaactttaga tgatgagaga agaaaacgaa
    13021 aagaattgat caataatgta gcacaacaag aagatttaat tgaaggtatt gtaaaaaaaa
    13081 ttaccactta tggtatgttt gtagatgtag gaggtgttga tggccttgtt cattacagcg
    13141 aaatttctta caaaggacct gtaaaccctg gaacacttta taaagagggc gataaagttc
    13201 cagttaaagt aataaagtat gataaagaac gcaaacattt atccttatct ataaaagcgg
    13261 ctttacctga tccatggagc gagataaaag atactcttga tataggtgat accattaaag
    13321 taatagtatc aaatatagag ccttatggtg cttttgtgga tttaggaaat gatatagaag
    13381 gatttttaca tatcagtgaa atttcttggg ataaaaatat taaaaatcca aaagattata
    13441 tcaataaagg tcaagaaatt gatgttgaag taattgaaat caatccaaat gaaagacgct
    13501 taagggtttc tttaagaaat ttactttcta gaccttttga tgaatttatg aaatcttaca
    13561 aaattgcaga tgtggttgaa ggagaaatta cctcagtaac ttcttttggt gcatttgtta
    13621 aacttggtgg tattgaaggt ttattgcata atgaagatgc ttcttgggat agaaacgata
    13681 aatgcaaaga caaattctct caaggggata aaatcaaggt aaaaattatc aaaatagatg
    13741 aagaaaacca aaaaatatca ttaagtacaa aagaattaag cagttctcca gtgcaagaat
    13801 atgctaaaat tcataaagtc ggcgatattg taaaaggtgc tatccgtgat attaaagatt
    13861 ttggtgtttt tgtagagcta agtaaaaatg ttgatgcttt aattcataaa gaagatataa
    13921 gcacttctat gcttgaaaat ttaaaaattg gcgacgatat tgaagctgct atagttttta
    13981 ttgatgaaaa gaaaaataga attcgcctaa gtgttaaaaa tcttgttaga ataaaagaaa
    14041 gagaagttct taatgaaatc aataatgatg ataaagtaac tttaggtgat atcattaaag
    14101 atcagctagc ttaatgaaaa aatacattac aataagcatt ttgagtattt tattactcat
    14161 tttgcttgct gttgttttta cattgctttg gcaatttaaa gctaatgtaa atttcattcc
    14221 acaatttgct aaagatacaa atacgcagcc aagcattcaa acccaaaatc aagatctttc
    14281 atggcaagaa gaattagcaa aatggcctac aagagatttt accccagcag cagaaaaatt
    14341 taccttatat tttgatgcgg atactagcga gcttaaggag aaaaataaat attatcaact
    14401 tatagttgga aaatatgata tttattctat gttttgctta agacagactt taaattcttt
    14461 taatgtgaag tattttcttc ttaaatctgg ccatagtcca gaaatctttt tggatacagg
    14521 caatgaaaaa cttatagatg atattatcaa agaattaaaa aaatataaaa taaatacaga
    14581 agtaaaggaa atttggttat gaaaaaaaag attatagtgt gtgatgctat tttggataaa
    14641 ggtgtcgata ttctaagaaa agctgaagat attgagctta tagaagctgc aaaatttcca
    14701 aaagatgaac ttatgcaaat gctaagcgat attgaagttg caattactag aagttctacg
    14761 gatgtagatg taaatttttt aaatcatgcc aaaaaattaa aagcgcttgt gcgtgccggg
    14821 gtgggcgtag ataatgttga tattccagag tgttctaaac gaggagtgat tgtgatgaat
    14881 gtcccaactg caaatactat tgccgcagtt gaactaacaa tggcacatct tttaacatca
    14941 gctagaagct ttgtcaatgc tcataatttt ttaaaaattg aaagaaaatg ggaaagagaa
    15001 aaatggtatg gcattgaatt gatgaataaa acgctagggg ttataggttt tggaaatata
    15061 ggttcaagag tagctatccg tgctaaagca tttggtatga aaattttagc ctatgatccg
    15121 tatatttctg cttctaagat tacagattta gatatggaac aagcaaaaaa tttggatgaa
    15181 attttagaaa aaagtgattt tattaccatt cacacaccaa aaaccaaaga aaccaatggt
    15241 atgataggaa agcaagaaat tgcaaaaatg aaagatggaa taagattaat aaattgtgct
    15301 cgtggaggat tgtacacaga agaggcttta tatgaaggtt taaaaagtgg taaaatagct
    15361 tggcttggta tagatgtgtt cgataaagaa cccgcgacta atcatcctct tttagacttt
    15421 gaaaatattt cagttacttc tcacctagga gcaaatactt tagaaagtca agacaatatc
    15481 gcaagagaag cttgtgagca agcattaagc gcagcacgag gcgtggctta tcctaatgcc
    15541 ttaaatttac caattaaaac tgaagattta ccaccttttg tagctcctta tatagaactt
    15601 gtttctaaaa tggctttttt agctgttcaa attgataaaa atcctataaa aagtattaaa
    15661 ttagaggctg aaggaattat tggtgagtat gcaaattcta tgctaacttt tgcagctgtt
    15721 ggtgctttgg gtggaatttt aggagagaaa attaattatg ttaatgcaga atttgttgcc
    15781 aaagaaaaag gagttgaatt atcttgcgaa actcttccaa atagtggtta taataataaa
    15841 cttagcgtta aaattatcac cgaaaattca aatatcagtg tttcaggaac agtgtttaat
    15901 gaaaatgaac aacgcatagt tggattaaat ggctttaaaa ctgattttaa gccaaaggga
    15961 aaaatgatta tttttaaaaa caaagacata ccaggagtta tagctaaaat cagttccgtt
    16021 ttggcagcta aaaatatcaa tatagctgat tttaggcttg gtagagatgg ttttgggtat
    16081 gctttggctg ttgttttgat tgatgaaaaa gttcaaaaag aagtattaga tgaactaaaa
    16141 caattagagg cgtgtgtatt tgtccaatat gttgaaattt aaaattttaa ttatagaaga
    16201 tgatatagat ttaaacgaac tgcttgtttt aaagttaaaa tctagtggtt atgaagttat
    16261 atctttagcg gatttttttg gagttgaaga tttgctcgat aatgagcaaa ttgatctttt
    16321 aatagtcgat agaaatttgc ccagtggaga ttctttagaa aaaattcaag atttaagaga
    16381 gcaaggatat aaagaagcag ttatttttct tacagccaag gctttacatc aagatttact
    16441 cgaaggcttt gaaagtggtt gtgatgatta tgtttgtaaa ccttttgatt tcaatgagct
    16501 tttgcttcgc attaaagcaa ttttaaaacg ccataaaaaa gaagaagaaa aactatcttt
    16561 tggtgatttt attttagatt tggttagtta tgaattcttt tacaaaaatc aaaaattaga
    16621 aatctcaaat cttgactatg agcttttaaa atgttttttt gaaaatccaa ataccttgct
    16681 tactagacaa tttttaagcg aaagtgtttg gaaagatgat actacaagtg ataaaacaat
    16741 caatatagct ctaacaagac ttagaaataa atttccaaaa ctaaaagatc atattataag
    16801 tgttaggggt attggctata aattatgcta aaaactaaaa atatttttat agtttttttt
    16861 gttgtattgg ctttgatttt tgggtttatt ttttatactt ttactaattc ttatcttaat
    16921 ttcttgctta taaaacaata tgaacaaaaa atcaaaagcc ttgatgatgt tttaaaattt
    16981 tctctcttag agcatttaaa tgatgctaat atcaaggatt ttgctaaaga tactagggct
    17041 gattttatta tcctaaacaa tgatatgaaa ataagttctg taaaaaatcc tgattttttt
    17101 tctaatctta aagaaggaga aattttaaat ttcaattcaa aaaaaattct cactaaaagc
    17161 tttatttaca aaggatataa atatattatt attgtttatc ctcgtttttt agatttagaa
    17221 cttttttgga caaaaatggc aatcggtttt ggagtatgct tgctgtttgt ttttatttta
    17281 atgttgttgt taggtagaag aatagagaaa aattttaata aaattttgga ttttttggat
    17341 tctatagggg atcataaagt tgttatatta gaaaaaggaa tctttaaaga atttaattta
    17401 ctaaatgaga aacttttaaa aactaaggat aaaattctaa agaataccca aaaaaataaa
    17461 aaacaaagcg ataaaatcac tttaaaaaat actcagcttg ctagcgtgat ttctgctatt
    17521 tctcatgagc ttaaaaatcc attaagcgtg attgatctta gcttagagat gctaaaagat
    17581 gagaaattgg aagataaaaa attaaaaaag gaattactag aaaaaatttc acgtcaaagc
    17641 gttaaactta atgctttaac ccataagctt aattttgttt ttaatcttaa tagtgaagcc
    17701 ttgcagatgc aagaattcga tcttttttct ctatgtgaaa aaatcactaa aaacccaggc
    17761 tttgaaagag ttgcattgca aggtaaaagc acgaaagtta aggctgatga atttttaatc
    17821 gagcaagtga ttataaattt gctttctaat gctttaaaat atagtcaaaa aaaagtcatt
    17881 ttaacggcaa gagatcaaaa gataatagtg caagattttg gaaaaggcat agaagaagat
    17941 aaaataaaat tgattacaaa aaaattttat aaaattgatg taaaaagtga taattctttt
    18001 ggtttgggac tttttttagt aaagaaaatt ttaaatatac ataaaagtta tcttgaaatt
    18061 tctagcactt taggttatgg ttctagtttt agctttaaac tcagtcaagg ataaaaaatg
    18121 gctcttatag atttaattga agcttcaaaa aaatttggag acaaaatagt tttaaatgaa
    18181 gtaaatttta gcgcaaacga gggagaaaag attgctatta taggcaaaaa tggagaagga
    18241 aaatctactt ttttaaaaac gcttttaggc gcacttcctt tagatagcgg tagaataata
    18301 agacaaaatg gaaaaagcat agccatgctt tcacaaaccg ttgattttaa tgcaaattta
    18361 agcgtaaaag aagccatcaa gcaagagctt gtagaaattt acaatacctt agaagaatat
    18421 gaaatactgc ataaaaaatt agaagaagat cctagtaata aagattatct tcaaaaaata
    18481 gatacgctta tgactttgat tgatagtaaa gatgcttgga gtatagaatc taaaataata
    18541 cgcgttttaa aagaatttag tttacttgag tatgaaaatc gcattatatc tactttaagt
    18601 ggtggagaaa tacgccgcgt tgggctttgc atacttttac taaaaaatcc tgatatttta
    18661 ttgcttgatg aaccaactaa tcatttagat gtatatatga caagcttttt ggaagaattg
    18721 ctaaaaaatt caaagatgtg tgtgattttt atttcccatg atagatattt tattgacgct
    18781 atagcacaca agtgtgtaga agtagagcag ggtaagctta gtatttttaa aggcggatat
    18841 gcaaactatt tagagaaaaa aacacaaatt ttgcaaagcc ttgctaagag ccatgaaact
    18901 cttttaaagc aattaaaaag cgaagaagaa tggcttagaa gaggggttaa agcaagactt
    18961 aaaagaaatg aaggacgaaa agaacgcatt tttaaaatgc gtgaagaagc gaaaaaaaat
    19021 cctggggcaa tcaaacgctt aaaacttgaa atttcaagag cggctttaaa ttttaatgga
    19081 gaaaaaacga tcaatcgtaa aaaaatgctt tttgagctta aaaatataag caaaaatata
    19141 aacaataaaa atctttttaa agatttttca acgcgtattt tacaaggtga acgcatagct
    19201 atcgtaggaa gaaatggttg tggaaaatca acattgttaa aaattcttct agggcaaata
    19261 aaacaagata gcggtgaaat aaaacgcgga gagcttaaga taggatattt tgatcaggct
    19321 agaagcttgg taaattctga taaaagcttg cttgaaattt tttgtcccaa tggtggagat
    19381 agggttgaag ttcgtggtaa aaatatgcat gtttatggat atttgaaaaa ttttctattt
    19441 cctaaggaat ttttagataa aagcgtggct cttttaagcg gcggagagaa aaatcgcgtt
    19501 gctttagcct tgctttttgc taaagaatat gatgttttga ttttagatga gccaactaat
    19561 gatcttgata tagctacgat taatatatta gaagaatact tacttagttt tgaaggggct
    19621 attttgctag tatcacacga tagatatttt gttgataaaa tcgcaacaaa actttatgct
    19681 tttgagggaa atggatatat aaatatttta cacactcttt atactgaata tcttgaaaat
    19741 gaaaaagaaa ttgaagaatt ggataatttt gctttagagc ttcaaaccca agagcaaaat
    19801 aataaccaaa aagaaaaaag ctccaaaaaa ttgagctaca aagaaaatga gatattaaaa
    19861 aaccatcctg aaaaaataga ttttttagag caaaagatag ctaaattaaa tcaagattta
    19921 tccgatccaa atgtatatca agaaataggt attaacaagc tttatcaaga gcttgaagta
    19981 atgcaaaaag aacttgaaat tctagaaaat gagtattttt tagtattaga gaaaagcgag
    20041 aatttataat taaagagatt ttatattttt tttactctat ggagcgggaa acgagattcg
    20101 aactcgcgac cccaaccttg gcaaggttgt gctctacccc tgagctattc ccgcaaaaaa
    20161 taagtggtgc ccgaggtcgg actcgaaccg acacaaggtt gcccttacca gattttgagt
    20221 ctggcgcgtc taccagtttc accactcggg ctcattttta agatttaaag ctaaaattat
    20281 acttttttag gctaaaaaat actttaaaaa taaaaagtat tttcaaaaag acaatataaa
    20341 attatataat ttaaattttt ggaacagtta ttgcttttgt ttattagcaa tgtttgaaaa
    20401 gattttaact ttaatacttt agaggaaaaa aatgagaatt acaaataaac ttaacttcac
    20461 aaatagtgtg aataattcta tgggcggtca aagtgcttta tatcagatat ctcaacaact
    20521 tgcttcaggt ttgaaaatac aaaattcata tgaagatgca agcacttata tagataatac
    20581 gcgtcttgaa tatgaaatta aaacgttaga acaagtaaaa gaatcaacaa gtagagctca
    20641 agaaatgact caaaatagta tgaaagcttt acaagatatg gttaaacttc ttgaagattt
    20701 taaagttaaa gtaacccaag ctgcaagcga tagcaattct caaacctcaa gagaagctat
    20761 agcaaaagaa ctagaacgta taaaagaaag catagttcag cttgcaaata ccagtgttaa
    20821 tggtcagtat ctttttgcgg gttctcaagt tgcaaacaaa ccttttgatt ctaatggaaa
    20881 ttattatgga gataaaaata atattaatgt agtaactgga gctggaactg aaagcccata
    20941 caatatacca ggttgggatt tattttttaa agcagatgga gactataaaa aacaaataag
    21001 cactaatgtt agttttacag ataatcgttg ggatttaaat aaagaccctg ataaaactaa
    21061 atatctcaca ggagattcta aatggcaaca acttatcgga caaagttatg taaaagataa
    21121 tagcttagat gctgacaaag actttgagta tgatgatagc aaactagatt ttcctccaac
    21181 aactctttat gttcaaggta caagacccga tggaacaagt tttaaaagtg ctgtactcgt
    21241 caaacccgaa gatactttag aagatgtaat ggaaaatatt ggagctcttt atggtaatac
    21301 tccaaataat aaagtagtag aagtaagtat gaatgatagt ggtcaaattc aaattacaga
    21361 tctaaagcaa ggtaataata aactcgattt tcatgctgta gctttcacac cacaagctga
    21421 tgataaaact gaattaaata atattatcca agcagcacag gatgaaggca ttacaatgga
    21481 agatgttaca aacagggtta tgactgctgc actaggaaat cccaataatg gagatattac
    21541 aaatttaaat aatcctgtaa ccattcaaat taacggacaa aactttgaaa ttgatttaaa
    21601 acaaactgat tttatcaaaa gtaaaatgac agatacagat ggaaatgctg ctaatggagc
    21661 tgattacgat aatgtgtatt ttgaaaaaaa tggcaatact gtttatggta atgtttctca
    21721 agttatcaaa ggaagcaatg cttatgccac tgattcaacc aaacttagcg aggtaatggc
    21781 aggagatagc ctaaatggta ctactttaaa tttaaaagtc aattccaaag gtggaaattc
    21841 ttacgatgtt actataaatt tacaaacttc aactgtaagc tatcctgatc ctaataatcc
    21901 aggtcaaacc ataagctttc ctattatgca tactaatcct gcaactggaa atagtggggt
    21961 tgttacagga tcaaatgata ttacttatgg tcaaattaat gatattatag gtatgtttgc
    22021 tgcagataaa attcctacaa caaccataca agccaataat ggtcaaatta ataatgcaga
    22081 ttatacccaa atacaacaac tcatgaaaga ttcacaagct actgttgatg taagtatgga
    22141 ttataaaggt cgtattagtg ttactgataa actttcatca ggaaccaata tagaaatttc
    22201 tcttagtgat tctcaaagtg gccaatttcc agcacctcct tttaccacaa cttctactgt
    22261 acaaaatggt ccaaatttta gttttagcgc gaataattct ttaactatag atgagccaaa
    22321 tgtggatatt attaaagatt tagattcaat gattgatgct gttttaaaag gcaatatgag
    22381 agcagactcc gaaagtgaaa accctagaaa tacaggtatg caaggagctt tagaaagact
    22441 tgatcattta gcagatcatg ttagcaagct taatacaact atgggagcat atcataatac
    22501 tatcgaaggt gttaatacac gcacatcatt tttaagcgtt aatatccaaa gtataaaatc
    22561 aaatgtgatt gatgtagatt atggtgaggc aatgatgaat ttaatgcaag ttcaacttgc
    22621 atatcaagct tctcttaaag ctagtacaac aatttctcaa cttagcttat taaattatat
    22681 gtaaaatttt ttatggtata atttggcttt gattttattt tcaaggaaag aatattaaaa
    22741 aagaagccat ttttaccagc tccacgcttg ttatttttta tctttgtctt tgtatgctag
    22801 cacctggcat gggagaatgg gtttacaagg ctaatttatt tttatttgga gaatttgcgt
    22861 attattatcc ttttttctta tttattttaa attatgttta ttataaaaga aattacaaat
    22921 tagctaattt tacaagaaga gagctttttg gtataggatt tgcctttttc tcgagtttgc
    22981 ttttatttgc agttttttat cctaattcag gctatatact agagcttgct tatgcgattt
    23041 tttctactat tttggggcat actgggagcg gaattttcgc tcttttactt ctactatttt
    23101 ctttggtttt attgtttcca aaatttgcaa aagaaatttt aaaaatagaa ttagatttta
    23161 cttatttatt aaaagtagag caagctttta aatctttact tatgcgtgta tttggtggag
    23221 aaaacgagaa agaagatgta ggtaaatcag aacctatagt tccaaaatta aatattttgc
    23281 aagatagtat ttatggaaat ttacaaataa acaaaaaagg ggaaaccaat aacttagaac
    23341 agataattaa agatagcaat atcaatgcaa gtaaaaattc aattaccacg gccaaggaaa
    23401 attttgaaaa actaaaaaat caaattttag atgaaaccat agagattgat aaacaaagtt
    23461 taaaagaatc aagaagtttt gttcatgagc attctcaaca agtgcgaaat ttcgcacaaa
    23521 aggctagtaa aatgagcatt agtcttgatg aagattttaa ttttatttca gaagaagagg
    23581 tagatatgat tcctgaacgt tttttaaaac ctaaaaaact tgaagatata aagcaaatag
    23641 atacaaataa aaatttagat gagccaagtt ataaacgtaa aaatattgaa attccagttt
    23701 ctaatcaaga agttaaacca aaaattttta caaaagagct tgaacttaga gagaatttga
    23761 taaaaaaaga aaaactagaa caagaataca aagcctatca aaatgaaatt ttagaaaata
    23821 aagtaaaaca agaaattaaa aaattagaag aatatgatgc gataaattca agcgatatta
    23881 tagaagggaa taaatatagt tttaatagcc caaaaacaat taaaacagaa acagaagaat
    23941 cagacaaaat aaatgaaaat aaaaatctag ataaagcaga caatatcttt gaatttgctc
    24001 ccattgtaga agagttaaat catccttata tagaacctac tcctataaaa aatataaatg
    24061 aaatagttat agaagaaaaa aatacactcg attttatcca aaatacagaa actaaaatcg
    24121 ataatgaaaa aacaaatgat caagaaatta aacttcaaaa agcagtttta gccaaagaaa
    24181 ttgctattaa ccaagcttta ttgcgtgaaa tagagcaggg cgaaatagaa aaaccaaaag
    24241 atttcacctt gccgccatta gattttttag ctaatccaaa agaacacaaa caagaaatca
    24301 atgaaagtga aatagataaa aaaatttata atcttcttga aaaattgcgt cgttttaaaa
    24361 taggcggcga tgttataagc acttatgttg gtcctgtggt aactactttt gaatttcgtc
    24421 ctagtgcaga tgtgaaagta agtcgtattt taaatttaca agatgattta actatggctt
    24481 taatggcaaa atcaatccgt attcaagctc caataccagg aaaagatgtt gtaggtatag
    24541 aagttccaaa tgatgaaatt caaaccattt atttaagaga aattttacaa agtgaagttt
    24601 ttaaaaacgc taaaagtcct ttaaccatag ctttaggtaa agatatagta ggcaatgctt
    24661 ttgtaaccga tcttaaaaaa cttccgcatt tactcatcgc aggaacgaca ggtagtggta
    24721 aaagtgtggg gataaattct atgcttttaa gtcttttata tcgcaactct ccaaaaacct
    24781 tgcgtttgat gatgatagat cctaagatgc ttgaatttag catttataat gacattcctc
    24841 atcttttaac tcctgttatc acagatccaa aaaaagcagt caatgcgctt tcaaatatgg
    24901 tagctgaaat ggaaagacgc tatcgcttaa tggctgatgc aaaaaccaaa aatatagaaa
    24961 attacaatga aaaaatgaaa gaattaggcg gagaagaact tccttttatt gtagtaatta
    25021 tcgatgaact tgctgatttg atgatgactg cgggtaaaga tgtagaattt tatataggaa
    25081 gacttgcgca aatggcaaga gcaagtggaa tccacttgat tgtagctaca caacgacctt
    25141 ctgttgatgt tgtaacagga ctaattaaag cgaatttacc aagtagaatt tcttataaag
    25201 tagggcaaaa aattgactct aaagttattt tagatgctat gggtgctgaa agtttacttg
    25261 gaagagggga ttgtttattt actcctcctg gaacaagctc tatagtgcgt ttgcatgcgc
    25321 cttttgcaag cgaatttgaa atagaaaaaa tcgtggattt tctaaaggat caacaaagcg
    25381 tagaatatga tgaaagcttt ttaaaggatc agcaaagcgt aggtgttaca acaaatgaaa
    25441 gctttgatgg ggaagcagat gagctttatg aagaagctaa aagagtaatc ttagaagatg
    25501 gaaaaacaag catttcttat ttacaacgcc gtttaaaaat cggctataac cgctctgcaa
    25561 atattattga acaacttacg caaaacggga ttttaagcga acctgatgcc aaaggacaaa
    25621 gggaaatctt gtaagatttt tcttgtgttt ttgatatata aaactgatta caaaagaaga
    25681 aatttaaaag gcaaaagccc cgtaaaaagg gcttaaaaat tatttatctc taagatttaa
    25741 ttcagtaatt aacttactat aagaattata atcttttctt ttaagataag ataaaagtct
    25801 ttttctttga cctacaagtt ttagaagtcc taatcttgat gaaaagtctt ttttgtagat
    25861 ttttaaatgt tctgtaagtt ctgcaattct tgcagttaaa agagctactt gaacttctgt
    25921 tgaaccagta tcacctggtt ttttagcgaa tttcgcaact atttctgctt ttttggccga
    25981 atccaaagcc atgatagacc tcctgattgg taaaataata aaattaaaga actgtaattt
    26041 tatcttaaaa agcaaaaaat aaactgaatt tatctttttt agaaggtttt gtcaaaattt
    26101 aagtcttttt ctaagaatta tttattataa ttacagctat ttctgtagtt ataacaagga
    26161 gaatctgtgc tatttaccaa agctagcgaa tacgctttac tttctttaat ttatatttct
    26221 caaaaagaaa cacctcaaga tgtagattct ttagctttag agcttgatat tcctaaaagt
    26281 tttttagcta aaattttaca aactttagct aaagatggct tgttaaaatc ctttaaaggg
    26341 gcaaaaggtg gttttgtttt aatcaaagaa ccaagtcaat atactataaa agaaattgtt
    26401 aatagtgctg aaaaaaagga tatcagtgta tttgaatgca gtggtggcac ttgtccaaat
    26461 aataaagaag aaaattgcac cttaatgcct atgttagtaa atttacaaaa taaagtagat
    26521 gaatttttag attctattac tttagaagat attatgaaaa ataatggcaa aaaataaaat
    26581 agtcgattta gtttttcctt tcttggggcc tttaatcgct cctgttttaa aagctaaaag
    26641 cttgactatt gttggttttt tagtttgtat tttagctatt attatagttc ctttaccaag
    26701 tcctattttg gactttttct tggctttaag tatagcttta tcggtattaa ttattttaat
    26761 ttctatttat atacccaaac cgacagattt aacaactttt ccaactttaa tcttgattat
    26821 cactttattt aggctttcat taaatatagc taccacaagg atgattttaa gcgaagggca
    26881 aaacggccct gaagctgtga gtgagattat agcagcattt ggagaatttg ttgttggtgg
    26941 aaatatggtc attggcgtga ttgtattttg tattttagta ttgattaatt tcatggttgt
    27001 aacaaaaggt agtacaaggg tttctgaagt acaagcaaga tttacacttg atgcgatgcc
    27061 gggtaaacaa atggctattg atgcggattt aaatgcagga cttattgatg aacaaaccgc
    27121 tagagcaaga cgtcaagaag ttattgctga ggcaaacttc tatggtgcaa tggatggttc
    27181 ttctaaattt atcaaaggag atgctgttgc aggaattatc ataactatta taaatatcat
    27241 aggtggtttt ttaataggat cttttcagca cgatatggct ttaagcgatg ctgcatctac
    27301 ttatactatt ttaaccatag gtgatggact tgtatctcaa attccagggc ttattacttc
    27361 tactgcaacc gctataatta tcactcgtgc aagcaaagat gaggaaaatt ttgcagaagg
    27421 aactttaact caacttttaa gcgaatatcg cacgctttta atagtaggtt ttgtactttt
    27481 tatctttgcg ttagtgcctg gtttgccaac tttatccttg ggctttatgg ctttagtatt
    27541 tttaagcctt ggctatctta ccaagcaggt taaggaaggt aaaattgata taactacagt
    27601 taaaaaaagc aaaccaagtg ccgcagttgc atctcaaagt ggagcaggtg ggacaacggc
    27661 agcgcctgct aagaaaagcg aagaagaaat tctcaaagaa gaagagcaca agattaacga
    27721 tatactcaaa gttgaaattt tagaacttga acttggatac ggacttatta agcttgctga
    27781 aaacgaactt acagaaagaa ttcgctcaat gagaagaagt attgctgaaa gtttaggatt
    27841 tttaatgcca aaaataagaa taagagataa tttaagactt aaaccaaatg agtatagttt
    27901 taaactcaag ggtgtgtcta tagcaagtgc tgaaatttat ccggataaat atttagccat
    27961 ggatagtggt tttatcacag aagagataga agggattgct acaaaagaac ccgcttttaa
    28021 ctctgatgca ctttggattg atgcgaattt aaaagatgaa gcaacattaa atggctatat
    28081 agtaatagat cctgcaagtg ttatttcaac acatatgagc gaacttatca aagcgcacgc
    28141 aagcgaactt ctcacacgcc aagaggtaca aaatcttctt gataaggtta aaaatgatta
    28201 tccaatcatc gtagaaggtg ctttaggtgt tgcacctgta agtcttattc aaaaaattct
    28261 caaagacttg cttaagcatc acataccaat taaagatatg cttactattt tagaatctgt
    28321 aagcgatata gcagaagtaa gcaagagttt tgatatgatt attgaacatg taagggcgtc
    28381 cttagctagg atgattacaa atatgtattt agatgataaa ggaaatttgg atatttttat
    28441 cttagactct gctagttctg cggttttaat ggaaaatgta caatttagag atggaagtta
    28501 tcacttgcct ttaagtgtag ctcaaacagg tactttagta gatactctaa gggctgaagt
    28561 tgccgcagta gcaaatggtc gtatcaagcc ttttatactt tgcgttgaac cgcagcttag
    28621 aaaattcatt gctgatattt gttataattt tagcattaat atagtagtgt taagttttgc
    28681 agaaattgca gaaaatacaa attttaatac cgagggtatt attaggatag aactttaagg
    28741 aatataatga aaatttatca tctttcacat acagatcttg atggctatgc ttgtcaattt
    28801 atagtaaatt tttattttaa aaatgtgaga ttttataatt ctaattatgg caaagaaatt
    28861 aatgaaaatt ttaactctat tataggcgat atagaaaaag atgaaaattt cggaaaagct
    28921 attattctaa taacagattt aaatttaaat ttaaatcaat gcgaagaatt tgaaaaaatt
    28981 tgcaaagaga aaaatattaa aatttttctt cttgatcatc atcaaagtgg cgaagaatgt
    29041 gctcaaaaat attcttggta tttacttgat tctaaaagat gtgcaactaa aatcgtttat
    29101 gattttttct ctaaaatctg cacccctgtt ttagagcttt caaaatttgt tgatgtggtt
    29161 aatgctgttg atatttggct aagcgaggat gaaaattttg aacttggaaa ggttttttta
    29221 ggcttgattg ccaatgcaaa agaaataaat cgcgtgatgt ttaaagaatc tcaaatcgat
    29281 tatatgtttt tcttgcttga taaggcttgg aaatttatag gaaaagaaaa tgcgaatatt
    29341 ttactcgata atgctactca ttttataaaa aaggattatt ttgccagaaa aaatgatgat
    29401 actctttcta atttaatttc ttgttttgta gttgaaaaac taagcgagct aaaagaaaat
    29461 ttcagtatag aatatgaagg ccataaaggc atcttaactt caaatatagg caatacttct
    29521 gttattggaa atgatttttt agtaaaaaat cctgattatg acttttttat tgatgttagt
    29581 tctagaaaaa ccttaagttt tcgtgcaaat ggaaaaatag atgtaagttt aatggctaaa
    29641 aatttagtag gtggtggtgg acataaaaat gctagtggtg gactttttgc gacatttaaa
    29701 gatggagcaa attataatca tattaaggct caaattattg atttaattaa aagcaaagaa
    29761 cttaaaaagg aaaacaatga atcaaaacaa taataaaacc ttaaaaaatg aactagaaga
    29821 tttacaatat gagcttagca tagttttaga agctatgctt ttatacgctg gagttaaaag
    29881 ggacaaatta gaaaatgcaa tagaagctta tattgataat atagataatg tgctcgaaaa
    29941 ttccaacaaa gaaggggttg atgaaatttt agaagtggtg gaatttctaa aaaataaata
    30001 caaagatttt tttcaatgaa aaagtgtatt ttaatttttt ttagtttata ttctttaagt
    30061 tttgccaata tttatgaaaa attaaatgat tttgcttatg aaaaaaaacc aaataaagat
    30121 tttaagattc aagacgttaa attagtgcaa ttttcacaag aaaataaaga ttgccttgaa
    30181 cttttaatag aagctggtca agttagaatt ttaaatagct ataattcttg tcaaaaatta
    30241 tctaaagatg aaagttttca aaaatttctt aatgaagatt ttttaaaact ttataaaaat
    30301 aatggatact tgattaatga aaatttacaa aatttgaaaa ataccatgca ggatattatg
    30361 atatattata aactccgata ttcttttagt aaagatgtaa aagatatgag taaaaataag
    30421 aatttggata ttttaaatat agatgaaaaa gacggtggta ctttgcttta caaaatcaac
    30481 aatcaagctt gcgttggaat agaacttaca agacatgact caagaatggc tatgaaaata
    30541 tacggaatag aaaatttgga taaagagtgc aaactattta tccaatcacc ttcttttaaa
    30601 gatctttcct acacaaaaaa agat
//
LOCUS       DAPIVO010000011        29091 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.011, whole genome shotgun sequence.
ACCESSION   DAPIVO010000011 DAPIVO010000000
VERSION     DAPIVO010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 29091)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29091)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29091
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.011"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..1239
                     /gene="cmeD"
                     /locus_tag="RJ239_000510"
     CDS             <1..1239
                     /gene="cmeD"
                     /locus_tag="RJ239_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter outer membrane
                     subunit CmeD"
                     /protein_id="HDV7330648.1"
                     /translation="ALYPLAMLASNLHEFIALSQNNESYLIKQMQSEQANLDKEQAFR
                     NYLPSLSLNSAYVANNKDRFIIDPQESLFAKVSLNFLLFDGGAREANLRALESREKLS
                     LLDKEQNKNYLALNAITLYFNTLSLEKILLANQQKVSFLKSTFERLQKFYDAGLSPKD
                     ELESIKAKYHLSLLELSQNELKLANIQKEIKILSDTDFKVQGNAFLENPQQEKSQNYE
                     VMIAKEQINLAKESVNLAKAEYFPKFYIQDNFNFYKNNYNPKVPAPFANLADQFLEKY
                     SQGNQFILGMEWKIFDFNARAKEVEKERLNVQIANANARFSERKNKEELNYLDKSLKV
                     LQEQILALNLSLNAANLAFESVDKKYQAGLVSYVEYLQALEVKFKAQSDLELAKNEFE
                     ITKANYYFNAGIDLNSKVKE"
     gene            1236..1976
                     /gene="cmeE"
                     /locus_tag="RJ239_000511"
     CDS             1236..1976
                     /gene="cmeE"
                     /locus_tag="RJ239_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit CmeE"
                     /protein_id="HDV7330649.1"
                     /translation="MKKILFLLLVFNCAFGEEIYASFNVEASKQSKLALESIGLVQKI
                     PVEIGQKVSKGELLLALDQESEKIALQNAQNSYQLALVEYENTKSRMQKIKAVENVID
                     KQSYEDMKAKFDAANLNLNKAKINIAYYKNIMAKKELRAPYDAIIANKFIQVGEGVGG
                     VAQPLIEIFSYPQSKLILSFDEKYKDKVRLGDDFFYKIDQNGTELKGKINLIYPSIEV
                     KTRKIYAEVQTTNLTPGLFGEGRIITKD"
     gene            1979..4996
                     /gene="cmeF"
                     /locus_tag="RJ239_000512"
     CDS             1979..4996
                     /gene="cmeF"
                     /locus_tag="RJ239_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit CmeF"
                     /protein_id="HDV7330650.1"
                     /translation="MFKLAINRPITVLMFFLALMIFGLISAFSMSVNLFPNVSIPLIK
                     ITSKINGDLNFVESKVTKEIENALSEIDGVKTITSAAYDNFSVSVVEFKLGKNLEVAA
                     NDVRDKIGTLSLPSKPEIEKISSDSGSAISLFLYSKDKLQLMREINDKIKPFLQRVEG
                     VGKIEAKGFLEPQIRIELKPNQLRKYNLNALDVANIIKSQNFKQALGELNNNQDNYII
                     KGYFEATNLEELSNLRIKTGVFLSDIANISSLYEDEKQSALYEGKEGVLLELGKITNY
                     NTLEMIKNVKNALPILEKQIPKDISINMLYDKSLNIHKHLSQVIFDMVLGIFLTLVIV
                     FLFLRNLSTTLIACIAIPTSIISTFFIIDLLGYDLNRLTFIALTLSIGIFIDDAIVVI
                     ENIAKKLKTYPPLQAAFLGINEIGFSVLSISIVLLCVFIPISYMNSISGLFFNALGIS
                     VASGIVISFLVSVFLIPSIGARFLNPKENKFYEKTEAFFEKIEQKYENLLYKILQNKV
                     KIILATLVFIGLSFALATRIGLDFLPMEDDSEIQVLLESKKDLSLEAMKEKSLNLLEK
                     IKNDSNVKYAFLLVGYDDAKDATKAKIYVKLKNLDERNLRQSAIVSLYRQKFQDESLK
                     IKILELPKIEGAGIDDPVQFLILGDDLNTLKEAASQAKEILGTNARIVDISDNANATK
                     DEVALHINKEKAKLLDVNPQYIAGVLGYSFSQLSVGSMDRGNSKDDIILSFAPEFKKD
                     IEALKRISIKNNQGINLELSSVVDFIYSKDLKTINRYNKNRSVKITAGVNDLSLGAVQ
                     KLLLDNMDKILNNNPSLSYAFSGFINLLGETVQGFAMAVALAFVLIYLVLAALYESFI
                     LPLIIMITMPLAFGGASIGLFITGHNFSLFVLIAIILLFGMVGKNAILLVDVANKKCH
                     EGLDPDKALLIAGKSRLRAILMTTFAMIFAMLPLALSRGAGYEANSPMAIAIIFGLIS
                     STLLTLLVVPALFKFCFKLDSKLRKIYEREKLN"
     gene            complement(5020..5826)
                     /locus_tag="RJ239_000513"
     CDS             complement(5020..5826)
                     /locus_tag="RJ239_000513"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDV7330651.1"
                     /translation="MQIVQTLETINVNTDDISVFQYFKDLITKNFTKVIGRKNKIFSF
                     FEENEIPQRRYFLKVLDQKYRKSTNEGIENLQDAHFKTFRLIFEQNNMLKPMLFIKID
                     FVAGRILMKLSSNEKLFIAYIRNYFQDHNIEYNEMTNILILEYKNENTLELFEVFADE
                     SEHLKYCVNFEVDREEYKKFRQNIHNKENMKWKFNALAKLFSNYFNTLECTPQNDLSE
                     IRQKYLILVKLYHPDFHQGKSAIEKAYAREQFEKIQIAYDNLKALYKNNT"
     gene            complement(5827..6546)
                     /locus_tag="RJ239_000514"
     CDS             complement(5827..6546)
                     /locus_tag="RJ239_000514"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HDV7330652.1"
                     /translation="MLEIGFCTLEDQCPYLKDKRSRIEYKYIENCPKEINNELIKRGW
                     RRFGRYFSRPICKDCDECLSLRILVNEYNFSRSERRVVNKNINTKVILRTPNLSNEHL
                     FLYDKYHRFMEEKKNWKRYDLSFKQYYNLYVDGFMNFGYELAFYIEDKLVCVDLIDIL
                     EDGISSIYCFYDPDFSYFSLGKFSLLNEIQIAKKMNLDYIYLGYFVKKCQSLSYKADY
                     TPNEILKGTKELFENEVLWEK"
     gene            complement(6546..6797)
                     /locus_tag="RJ239_000515"
     CDS             complement(6546..6797)
                     /locus_tag="RJ239_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330653.1"
                     /translation="MDFLDSLKSIKKEMQANTNTSKLAKKSSKSGASVKNLEKLAKDI
                     REKNQETNIDKEMQEIFLKQEKLQDEFSEFIKNADIKKI"
     gene            complement(6801..8246)
                     /locus_tag="RJ239_000516"
     CDS             complement(6801..8246)
                     /locus_tag="RJ239_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase subunit A"
                     /protein_id="HDV7330654.1"
                     /translation="MNQIHKILIANRAEIAVRVIRACRDLHIKSVAVFTEPDRECLHV
                     KIADEAYRIGTDAIRGYLDVARIVEIAKACGADAIHPGYGFLSENYEFAKACEDAGII
                     FIGPKSEVIHKMGNKNIARKLMAKNGIPIVPGTEKLNSYSMEEIKIFAEKIGYPVILK
                     ASGGGGGRGIRVVHKEQDLENAFESCKREALTYFNNDEVFMEKYVVNPRHIEFQILGD
                     NYGNIIHLCERDCSIQRRHQKVIEIAPCPGISDNLRKTMGVTAVAAAKAVGYTNAGTI
                     EFLLDDYNRFYFMEMNTRIQVEHPITEEITGIDLIVRQIRIAAGEILDLEQSDIKPRG
                     FAIEARITAENVWKNFIPSPGKIGEYYPALGPSVRVDSHIYKDYTVPPYYDSMLAKLI
                     IKATSYDLAVNKLERALKEFVIDDIRTTIPFLIAITKTREFRRGYLDTSFIETHMQEL
                     LEKTEDRHQENKEEVIAAIAATLKKIRESRE"
     gene            8386..9549
                     /gene="ftsW"
                     /locus_tag="RJ239_000517"
     CDS             8386..9549
                     /gene="ftsW"
                     /locus_tag="RJ239_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HDV7330655.1"
                     /translation="MVADKRLFYLSCILITIGIVFSYSLTAFTVLFLDYSEFHFFIRQ
                     LFFGISGILIMFFISRLDPDKALSKKIILAILIVSFIFIIILPFLPSVLATASGGAKR
                     WIRLGPLSISPVEFFKIGLIYFLAWSYTRRIDDSKKAIRHEALILLPYCILASIVIGY
                     IYITQNDLGQSVISFFLILALAFFAGASKRLFAFGTLIIMMIGIMVIFSNQRRIQRIA
                     SWWGNIQDAFLPMLPDWLANALRVSSNSEPYQISHSLNAIAHGGMFGEGLGLGTFKLG
                     FLSEVHTDFVLSGITEEIGLLGLGVICYIYLWMILRIFRIAGRCEAKQDFIFCSGIAL
                     LLLFSFFMNAFGIISLTPLKGVAVPLLSYGGSSMWAICIGIGYVLMISKKVKL"
     gene            9546..10574
                     /gene="murG"
                     /locus_tag="RJ239_000518"
     CDS             9546..10574
                     /gene="murG"
                     /locus_tag="RJ239_000518"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HDV7330656.1"
                     /translation="MTIALTGGGTGGHLAIVRCLLESAIKKNIECVYIGSQNGQDKAW
                     FENEVRFKEKFFLSSKGVVNQSKFDKISSLLHTLKLSKDCREIFKKYHIQAVFSVGGY
                     SAAPASFAALFSHLPLFIHEQNSKSGSLNMLLKPFATKFFSAFEKKISPYPVADKFFD
                     NARIRKELKNIIFLGGSQGAQFINELALNLAPKLQEQNIKIIHQCGKNDFEKCKKHYQ
                     SLNIQADIFDFSLNLEEKMKNADLAISRAGASTLFELCANTLPTIFIPYPYAAKNHQY
                     FNAKFLQDQALCQIFMQNSINLDEFFKSILKLNLENISTRLQNITQKNGADMLIQKAL
                     FDNLTFIR"
     gene            complement(10545..11708)
                     /locus_tag="RJ239_000519"
     CDS             complement(10545..11708)
                     /locus_tag="RJ239_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CynX/NimT family MFS transporter"
                     /protein_id="HDV7330657.1"
                     /translation="MASFKKIFWINVTIVIIVAFNLRAPITAVGPIIDIIKDKYYLNS
                     TVAGILTSLPLIAFGSISFIVGYFSPIRAIVFGIFLIFLGEIIRSYFGVYGLFLGMLA
                     MGCGIAIANVLLPSFIKEKFPKKMASIMGIYSLVLSISSIMGIALAIPLLSVFDLAGA
                     MFFWAIFSFVALVVYYPQAKNGRFFRIKKKTHKKINLFTNLTTWKITLFMGFQSFLAY
                     SLFFWYVQIVVEKGFDKEFSTSMVLFAQLVAAPVSLFGPLLLGKLRQNLHTFYIAGLC
                     SMYVIAFGMLFIFDSKISIIISAFIMGFPWGGVFGIALLFIAQKSSNAQIAARLSALA
                     QGFGYLIAAQGQWIIGFLHDKFENFSFAILMLVFVGILVNIFGYLSYKSQIIK"
     gene            complement(11716..12567)
                     /locus_tag="RJ239_000520"
     CDS             complement(11716..12567)
                     /locus_tag="RJ239_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7330658.1"
                     /translation="MKKYVLSLALLGSLLGASELKYQEFDGFKSPESIFVDKNYVYVS
                     NVGEKLEPLAKDNDGFISKLDKNGKVLEYKFLTHLNAPKGMMEIGKTLYVVDIDVLRG
                     FDLKTKKEIFNLPIKGAIFLNDIEKLDDNTLLVSDTGTGLILKVDLKTKQYDELLKLD
                     LAKFGGPNGLYLDRKKHKLFIAGYHPDGVSGGVVMAYDLNTKELSIIKNEKESYDGIV
                     PYKDGLLVSSWGNNLNGYIYNLDNVKSVKLELPLMKGPADIFIEGNILWIPKMVEGKI
                     FKVELNK"
     gene            complement(12630..13520)
                     /locus_tag="RJ239_000521"
     CDS             complement(12630..13520)
                     /locus_tag="RJ239_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV7330659.1"
                     /translation="MNKILSLPEDLKQLKGVNYKKIKSCTFAKYTQTDTSHSTFVNVG
                     SHLLTFVRKGYKILHTASKDYKINSYETLFLKAGSYTLSNVGLSKGVYEAYLFFFDNA
                     FLIELIYKYKDFFKLDQKFQNYEIFWVKNDKILQGILESFSPHFEENTQILDPIVSLK
                     FEEIFLHLLLNKNIYFISFLSGILKEFRLDLSQLFEYCGREFLSVNEMSNFAKLDLAT
                     FSKEFKKCFGQSPKKWLDEKRLQKAKILLKFSKKNINEIANECAFSSVAWFIERFKEK
                     YEQTPKQYQKTKNLYFLSKN"
     gene            complement(13517..14122)
                     /locus_tag="RJ239_000522"
     CDS             complement(13517..14122)
                     /locus_tag="RJ239_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDV7330660.1"
                     /translation="MWDKKIIAISDRKCVEIDFLKQIEKLAKAKVDAIVLREKDLSEF
                     EYYDLAKEVLSICAKQKVTCFLHFFDRECLKLGHRYFHAPLSLLRKEPKLTKYFHILG
                     TSVHSKEELLEAMSYKVNYAFVGHIFESSCKMGLEPKGIDFLKSLLEFSQIPLYAIGG
                     INAQNIENFKDINVVGVCMREILMKEKDLKKYLLECRQNLR"
     gene            complement(14112..15257)
                     /gene="thiH"
                     /locus_tag="RJ239_000523"
     CDS             complement(14112..15257)
                     /gene="thiH"
                     /locus_tag="RJ239_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminoacetate synthase ThiH"
                     /protein_id="HDV7330661.1"
                     /translation="MQDYMQHLPHMQEIKSEILNKVLTQVQSYDESQFSAKDVKNALN
                     QTHLSIEHLKALLSSAAEDFIEELAFKSAKVKQKYFGNSISLFTPLYLSNYCNSKCVY
                     CGFQKGNKIARAKLNEAEIHEEMQAIAKSGLEEILMLTGEGREFASVEYIANACKIAR
                     EYFKVVGVEIYPMNEDEYKILHEKGCDYVTVFQETYNPLKYSKIHLAGEKRIFPYRFN
                     AQERALKAGMRGVAFAALLGIDDFRKDALATALHAHFLQQAYSHAEISISVPRLRPII
                     NNAKIHPKDVSEKRLLQVLCAYRLFLPFAGITISSRERIGFRDEVIKLGATKMSAGVS
                     VGIGEHKGEKKGDEQFEISDDRSVDEILAMLKRSNLQAVMSDSIYVG"
     gene            complement(15260..16036)
                     /locus_tag="RJ239_000524"
     CDS             complement(15260..16036)
                     /locus_tag="RJ239_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HDV7330662.1"
                     /translation="MQENLKNDKLKIGKYEFDSRFILGSGKYSLELIKSAIEEAKAQI
                     ITLALRRANTGEIANILDYIPKNITLLPNTSGARNADEALRIARLSRELGCGELIKIE
                     VISDSRYLLPDNYETIKACELLAKEGFTPLPYMHADLYAARAMRDAGAAAIMPLAAPI
                     GSNKGLCAKEFIQILLNEIDLPIIVDAGIGSPSQACEAMQMGVSAVMVNTAIAEAKDI
                     ALMARAFSLAVNAGRAAFLAGVASVSEAKASSPLTGFLRD"
     gene            complement(16039..16842)
                     /gene="thiF"
                     /locus_tag="RJ239_000525"
     CDS             complement(16039..16842)
                     /gene="thiF"
                     /locus_tag="RJ239_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine biosynthesis protein ThiF"
                     /protein_id="HDV7330663.1"
                     /translation="MMRVKFNGKELDTDFKTSLEFFENISKNENDVWIINGFATKENI
                     ALNENDELFCIEKNTLPPKDALDAMMRARHTPKLHDKLKNGRVAVCGLGGLGSHIAIN
                     LARSGVGYLKLIDFDVIEPSNLNRQAYRVSDLGKFKTEALKEQISEINPYISVEICTL
                     KIDEDNLESLFKDIDIVCEAFDSAIAKAMIAQNFHRFYKDGILICASGLAGYGDSNSI
                     QTRKIAKNFYVCGDLVNGAKLGNGLMAPRVNICAGHQSNLVLELLANKE"
     gene            complement(16839..17030)
                     /gene="thiS"
                     /locus_tag="RJ239_000526"
     CDS             complement(16839..17030)
                     /gene="thiS"
                     /locus_tag="RJ239_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HDV7330664.1"
                     /translation="MIINGQKLELKELKFMDFIKEKGFKIELIALELNGEIVPKSEFE
                     NLILKENDKAEIVSFVGGG"
     gene            complement(17040..18137)
                     /gene="dapE"
                     /locus_tag="RJ239_000527"
     CDS             complement(17040..18137)
                     /gene="dapE"
                     /locus_tag="RJ239_000527"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HDV7330665.1"
                     /translation="MNAKEFLIELLKFKSVTPNDDGALNFIAMELSDFEAFFIEKEGI
                     KNLLLTKKFKDEGEHLAFGGHVDVVPAGEGWSNNAFAPVEKEGFIYARGAQDMKSGVA
                     AFVDAAKNADFKGARLSLILTSDEEGEAIYGTKAVLEWMQERDMLPDYAVVAEPTCVK
                     KIGDSIKIGRRGSINGKLLIRGKQGHVAYPEKCINPVHDFAPVLKLLAGFDLDPGSAE
                     FSPSKIVITDIRGGMGVCNVTPNDLKLMFNVRNSPDTSLEDVKSYVEKICHGLNYELE
                     LKQSSEAFLTNIDNKIVQKMNESVQKITHEVPELNTKGGTSDARYFAKYGVKVVEFGV
                     CNDRIHAIDERVSIEEFEKLCLVFKDLIENF"
     gene            complement(18141..18740)
                     /locus_tag="RJ239_000528"
     CDS             complement(18141..18740)
                     /locus_tag="RJ239_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HDV7330666.1"
                     /translation="MFDSFLSGVFLGFGVSVPFGPVNILILTYALKAFKNSIAVGLGA
                     FSIDMLYLFLLQFGLLNFLDNVIFMRSLAIFGFCFLTYMAYLMLRKKKESLNLEHKEF
                     KESLLKSYIKGAFLNGSNPFVIGFWLSAASVVLSSDHAYLMTLGLVVAILFWVSALAF
                     VVARYSHVFSAKVVFIINIISAIIIEYFALNLLYKTFLG"
     gene            complement(18733..19434)
                     /locus_tag="RJ239_000529"
     CDS             complement(18733..19434)
                     /locus_tag="RJ239_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacetylase"
                     /protein_id="HDV7330667.1"
                     /translation="MKNIMILSGAGLSAPSGLKTFRDNDGLWEEYDVMEVCSATGFRK
                     NPKKVLDFYDARRAQLQNVKPNHAHEKIAQLKEKWGKNLFVITQNVDDLLERAGCKDV
                     VHLHGFLPELRCLKCEEIFNIGYEKIIDKQCPKCKSKDLRHNIVMFEEQAPAYATLYS
                     LLNQTSLFISIGTSGAVLPVGRYASMCEKSILNIYEKDANLERYFDKIYIEDIISAID
                     KIALDIENFMKDGNV"
     gene            complement(19477..23496)
                     /locus_tag="RJ239_000530"
     CDS             complement(19477..23496)
                     /locus_tag="RJ239_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HDV7330668.1"
                     /translation="MITKDNLKQVLENLGFKNKNENYVKTINNYTLLIDYKNQSINYP
                     KEIKIHDKTTSNFSHPENFVVFECVHRLLEKGYKAEYLELEPKWNLGRDKKGGKADIL
                     VKDNENNPYLIIECKTTDSKNSEFIKEWNRMQEDGGQLFSYFQQEKGVKYLCLYTSDF
                     SDKLEYKNYIIQAYDNEEYLKEKELQNSYKKSNNNIELFKTWKESYELQYFKQGIFEE
                     NVNAYKILEITPTFDNLKELKEEGKYHEFAKILRKHNISGKENAFDKLVNIFLCKIYD
                     ETFNKNNLKFGYFGVMADTYANMQDRLMWLYKEAMKEFLGEKITFVSNEDIEKDFKQL
                     KIKTLKEVMQNYIKELKFYSNNDFAFLEVHNKELFLKNALVLKEIVELFANYKLTQNS
                     TNQFLGNLFELFLQKGMKQDEGQFFTPIQICEFIMYSLPLQEMLSKSSKALRVIDYAC
                     GAGHFLNTYANELKRYLTEDELKEHYKNIYGIEKEYRLSKVSKVSSAMYGQNEINILY
                     ADALASFELANTNNLEGEKAKPQIESNSFDLLIANPPYSVKGFLETLSDKSKNTYKLF
                     NDDINIETNNSIECFFCERANQILNDNAKAAIILPSSILNKDSIYKNTREILFQNFDF
                     IAIVELGNQTFGATGTNTIILFLRKKETFKQENHLISQDYSLIKERIEAENLKDNENF
                     YQNYLSAYCDFRKFDKELYSNFLNGNLDSKLAELEAFKDYRNAFRQTSDYKKLKESKI
                     YKESKDKQDLEDKAFLAYTQAIEKDKLLYFCLSLNQEVLIIKSPSDIKEQKKFLGYEW
                     SNRKGDEGLKELHEPYLSPLFERGNPQNETKLNTLICKAFLKTLSDIPKDLQGYASKA
                     RLIDMMDFEKVEFNKAISLNVKSRDELNPFKNSKYELVRLGEVCDLNKIRNQASATEI
                     EKMNLNSGNVKLLPSSKNYEWWTDEKTAGQFINEGEVITLGVARYANIKKHKGKFVSA
                     NNHILSVKDKSKIIFDFLYILLEICGQKLYKQGQQYPQFDTNIFYSFKIPLPPLEIQK
                     QIVAECEKIEEQHNTLSLSIKEYQKLIKAMLQKSGIIEDNQEYELNSILENLQKLESK
                     LDFNLLLSLIEEQISHSEVLVEETQSKERKQDFNAFKNFSKTIQELLQTLSTPPKDGW
                     KRISLKNEQYMELNPSKKEISKLDENMLVSFIEMASVSDKGYIQSKIDRSLNEVRKGY
                     TYFIENDILIAKITPCMENGKCAIAKNLTNNIGFGSTEFHIFRAKTGLDSSFLFYNLN
                     QQNIREKAALAMTGASGHKRVPISFYENLTIPLPPLEIQEKIVQNIELVEQQIDLLNL
                     KLEFLEKEKEKILQKYLFS"
     gene            complement(23505..25715)
                     /locus_tag="RJ239_000531"
     CDS             complement(23505..25715)
                     /locus_tag="RJ239_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HDV7330669.1"
                     /translation="MMNDTKEELISKLDLNSYLEEFKALFARDKEIFLQGDSNLHFKR
                     IHELCEVEFPTMPELSNLDKALVHLSKQGILHLDEIFEFVKIFRYFEKLKKIKLGTNL
                     GSWLQKIEFVSGALELCLNFDEKGELKESLDERLVNLNAALRLKNESIIAEFKKFCYT
                     KALMPYLIDTQIHLINNLEALLVRGGFNHAIKAKIIGRSSGGGFYIVPLSVENLQNDI
                     EKIKNQKEEIYYEYAKNFSAFLAKNLPFLKFINTAFDLFDHYSARVLLAKKRDFEFVL
                     CDQSTDLVLKNFAHPALKNPKSVSLEFKKQVLIITGVNAGGKSMLLKSMLSAAFLAKH
                     LLPMHIKASESKIGTFKEFDAIIEDPQNVKNDISTFAGRMLHFSRLFSKKNLLLGIDE
                     IELGTDFEEAACLYSVLISKLIANNLKIIITTHHKRLAMLLAKNEQVELIAALYDEEL
                     SRPKYEFLKGTIGKSYAFETALRYQIPPNLVSEAKKLYGEDKENLEELVGKNINLELE
                     LKAKLENVEKKEQKVDEILLSLKEQKEKNEQEFRTSLRNLEFKLHKAIEEAKKTIQLK
                     DIKDKQRSLNKTNELKKEIILPSMEQNEELRVGDFVKYEKIKGKIISISKNDAMVESD
                     GIKLRVPLKLLKKSTPTPKISPKTSISVAKPTNLSVSLDLHGLRSDEAISRLDKFISD
                     ALLAGFDEVLVYHGIGTGKLAFAVREFLKTHKSVKGFNDAPINQGGFGAKVVRL"
     gene            complement(25705..26055)
                     /locus_tag="RJ239_000532"
     CDS             complement(25705..26055)
                     /locus_tag="RJ239_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330670.1"
                     /translation="MSRFFLYFLIILILALITFALREKLGKKTKPFFGILLVIFIVLA
                     VFFEFENTQKSHLRTDIIVAFNQNKNILCKDINVSKAYFNYEFGTGSFISKDNNQSFN
                     SLIIDIKDCRLNDE"
     gene            complement(26048..27346)
                     /locus_tag="RJ239_000533"
     CDS             complement(26048..27346)
                     /locus_tag="RJ239_000533"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HDV7330671.1"
                     /translation="MMQNIHFIGIGGIGISALARFLKEKGFKISGSDLKESKITNELE
                     KEGVKVSIPHHKDNILNKDLVIYSAAIKEENPEFKHAKELGIKCLSRKEALPLILEDK
                     RVFAVAGAHGKSTTSSILASLLDDASVIIGAILKEFGSNMIYKESQNLVFEADESDSS
                     FLNSNPYLAIVTNAEAEHLDHYGNEVSKLHYAYTQFLDTAKIRVINAEDEFLKNYKNE
                     SIKLYPSKDIKNCTMCIENFKPFTSFELKDLGEFKVFGMGYHLALDASLAILAALNFL
                     DIETIRTRLKNYQGIKKRFDILHADENLVLIDDYGHHPTEIKATLSAAQEYARLGGYK
                     KITAIFEPHRYTRLAANLKEFAKAFEGVDELIILPVYAAGEEPIELDLKAVFPKALFV
                     EDIKREGKFLVASKGQVFEEGLIIGFGAGDISNKLRQKNE"
     gene            complement(27410..28918)
                     /locus_tag="RJ239_000534"
     CDS             complement(27410..28918)
                     /locus_tag="RJ239_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002844947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HDV7330672.1"
                     /translation="MLIFGVFVFFLNLKILNLKLKPVNLRLFPLIALNLILIIVYVIA
                     LRGPFKHVAINVQNYSFSEYSVVNDTMLNPIMAFSWALKQYKEEAALKAITPLKAQEL
                     KEKLFDYLHQSPINLKAEKNHPSVFVNLMESFGLNLADFTNTEHNFLGSLDKHFKQDF
                     LFKRFLSSSNGTIPSFANLFFVSPFSNISTSKFQKTYLDLTPIAIYKKAGYKVIFVSA
                     GNGSWQNIKNYLSILGVDEIIDENILMKEYNGAKDSENGYGVADEFLYKKVYDLLQKN
                     PHNTLIIALTISNHPPYKIPQNDLPKLQNIPQTLLNMLPYEKDKQDNIIKAYTYANNE
                     FGKFLDKVKQSSFKDNVIIAATGDHRVREMSIDLNSQKAFAYSVPFYLYIPKDLQDDI
                     YYDKDRVGSHKDIFPTLYALSLNNVKYLSVGGRNMLARPSDEKLEFGINDAVWIDKKG
                     IYSGGKGYYFESNDTLKDMNKAFNLDVYTKDFDKFYRELNLYQLAERLGISK"
BASE COUNT         9870 a         5031 c         3805 g        10385 t
ORIGIN      
        1 gctctttatc ccttagcaat gttagcttct aatttgcacg aatttatagc actaagtcaa
       61 aataatgaat cctatctcat taagcaaatg caaagcgaac aagcaaattt agacaaagaa
      121 caagctttta gaaattacct accctctctt agtctaaact cagcttatgt agccaacaat
      181 aaagatcgct tcattatcga tccacaagaa agtttatttg ctaaagtttc tcttaatttt
      241 ttgctttttg atgggggtgc tagagaggct aatttaagag ctttagaaag cagagaaaaa
      301 ttaagccttt tagacaaaga acaaaataaa aattaccttg ccctaaatgc aatcacactt
      361 tattttaaca ccttaagtct tgaaaaaatt ttactagcca atcaacaaaa agtatctttt
      421 ttaaaatcaa cttttgaaag attgcaaaaa ttttacgacg caggacttag ccctaaagat
      481 gaacttgaaa gcattaaggc taaataccat ttaagcttat tagagctcag tcaaaatgaa
      541 ttaaaacttg ccaatataca aaaagagatt aaaattttaa gcgatacaga ttttaaagtg
      601 caagggaatg cttttttaga aaatccgcaa caagaaaaaa gtcaaaacta tgaagtaatg
      661 atagctaaag aacaaatcaa tcttgctaaa gaaagtgtaa atttagcaaa agctgaatat
      721 tttccaaaat tttatattca agataatttt aacttttata aaaacaatta taatccaaaa
      781 gttccagctc cttttgcaaa tttagcggat caattcttag aaaaatattc tcaaggtaat
      841 caatttattt taggtatgga atggaaaatt tttgatttca atgcaagggc taaagaagtt
      901 gaaaaagagc gtttaaatgt tcaaatagcc aatgcaaatg caagatttag cgagagaaaa
      961 aataaagaag aattaaatta tttagacaaa agtttaaaag ttttacaaga acaaatttta
     1021 gctcttaatc ttagcttaaa tgctgcaaat ttagcttttg aaagtgtaga taaaaaatac
     1081 caagcaggac ttgtttctta tgtagaatat cttcaagctt tagaggttaa atttaaagca
     1141 caaagcgatt tagagcttgc taaaaatgaa tttgaaatta ctaaagcaaa ttattatttt
     1201 aatgcgggta tagatcttaa ttcaaaggtt aaagaatgaa aaaaattcta tttttacttc
     1261 ttgtttttaa ttgcgccttt ggcgaagaaa tttacgcaag tttcaatgta gaagcatcaa
     1321 aacaaagcaa acttgccctt gaaagcatag gtttggttca aaaaattcct gtagaaattg
     1381 gacaaaaagt cagcaaagga gaacttttac ttgctcttga tcaagaaagt gaaaaaatag
     1441 ctcttcaaaa tgctcaaaat tcttatcaac ttgcccttgt agaatacgaa aataccaaaa
     1501 gtaggatgca aaaaatcaaa gctgtagaaa atgttataga caaacaaagc tatgaagata
     1561 tgaaagctaa gtttgatgct gctaatttaa atttaaacaa agcaaaaatc aatatagctt
     1621 attataaaaa tatcatggca aaaaaagaat tacgcgcacc ttatgatgct attatcgcaa
     1681 acaaatttat acaagtgggc gaaggagtag gaggagtagc tcaaccttta atagaaattt
     1741 tttcctatcc acaaagcaaa ctgattttaa gttttgatga aaaatataaa gataaagtta
     1801 gattaggcga tgatttcttt tataaaatcg atcaaaatgg tacagaattg aaaggaaaaa
     1861 tcaaccttat ttatccaagt atagaagtaa aaacaagaaa aatttatgct gaagtgcaaa
     1921 ccacaaatct aacaccaggg ctttttggtg aaggtagaat catcactaaa gattaaaaat
     1981 gtttaaacta gctataaacc gacctattac cgtgctaatg tttttcttag ctcttatgat
     2041 ttttgggcta atctctgctt ttagcatgag tgtaaattta tttcctaatg tttccatacc
     2101 tcttataaaa atcacaagca agataaatgg ggatttaaat ttcgtagaat caaaagtcac
     2161 taaagaaata gaaaatgctt taagtgaaat cgatggagta aagaccataa cctcagctgc
     2221 atatgataat tttagtgtaa gtgtagtcga gtttaaactg ggtaaaaatc ttgaagtagc
     2281 tgccaatgat gtgcgtgata aaataggaac tttaagccta ccttctaagc ctgaaattga
     2341 aaaaatcagt tcagattctg gttctgctat ttcacttttt ctatattcta aagataaatt
     2401 acaactcatg cgtgaaatca atgacaaaat aaaacctttt ttgcaaagag ttgaaggagt
     2461 aggtaaaatc gaagctaagg ggtttttaga accccaaatt cgcatagaat taaaaccaaa
     2521 ccaacttaga aaatacaatc ttaacgccct tgatgtagca aatatcatca aaagtcaaaa
     2581 ttttaaacaa gccctaggcg aacttaacaa caatcaagat aactatatca tcaaaggcta
     2641 ttttgaagcc acaaatttag aagaacttag caatcttcgc ataaaaacag gagtattttt
     2701 aagtgatatt gctaatattt caagccttta tgaagatgaa aaacaaagtg ctttatacga
     2761 aggtaaagaa ggggtgcttt tagaactcgg aaaaatcaca aattataaca cccttgaaat
     2821 gattaaaaat gtcaaaaatg ccttgcctat tttagaaaaa caaattccaa aagatataag
     2881 cattaatatg ctttatgata aaagcttaaa tatccacaag cacctttctc aagtgatttt
     2941 tgatatggtt ttggggattt ttctaaccct tgttatcgtg tttttatttt taagaaattt
     3001 aagtacaact ctcattgctt gcatagctat acctacttct atcatttcaa ctttttttat
     3061 tatcgatctt ttaggctatg atttaaaccg cttaactttt atagctttaa ccttaagcat
     3121 aggaattttt atcgatgatg ctatagtagt gattgaaaat attgctaaaa aactaaaaac
     3181 ttatccgcct ttacaagctg cttttttagg tatcaatgaa ataggtttta gcgttttaag
     3241 cataagtata gttttacttt gtgtttttat ccctatttct tatatgaact ctatatcagg
     3301 gctttttttc aatgccttag gcataagcgt tgcaagtggg atagttataa gctttttggt
     3361 ttctgtattt ttaataccta gtattggggc aagattttta aatccaaaag aaaacaagtt
     3421 ttatgaaaaa acagaagctt tttttgaaaa aatagagcaa aagtatgaaa atttactcta
     3481 taaaatttta caaaataaag taaaaattat cctagccact cttgttttta tagggctttc
     3541 ttttgcttta gccactcgca tagggcttga ttttttacct atggaagatg atagtgaaat
     3601 tcaagttttg cttgaaagca aaaaggattt aagtttagaa gccatgaaag aaaaaagttt
     3661 aaatttgctt gaaaaaatca aaaatgatag caatgtcaaa tacgcttttt tacttgtagg
     3721 ctatgatgat gccaaagatg ctacaaaggc taaaatttat gttaaactta aaaatttaga
     3781 cgaaagaaat ttaagacaaa gtgccatagt aagtttatat cgtcaaaaat ttcaagatga
     3841 aagtttaaaa atcaaaattt tagaacttcc aaagatagag ggtgcaggca ttgatgatcc
     3901 cgtgcaattt ttaatcttag gagatgattt aaacactctg aaagaagctg cttctcaggc
     3961 aaaagaaatt ttaggcacta atgcacgcat tgtagatata agtgataatg ctaatgctac
     4021 aaaagatgaa gtagccttac acatcaacaa agaaaaagcc aaacttttag atgtcaatcc
     4081 tcaatatatc gctggggttt tagggtattc tttctcgcaa cttagcgtag gaagcatgga
     4141 tagaggcaat tcaaaagatg atattatcct aagttttgct ccagaattta aaaaagacat
     4201 agaagcttta aagcgcatta gcattaaaaa caaccaaggt ataaatttag aactttcaag
     4261 cgtggtggat tttatataca gtaaagattt aaaaactatc aatcgttaca ataaaaaccg
     4321 ctctgtgaaa atcacagctg gagtgaatga tctttcctta ggagcggtgc aaaaactttt
     4381 actagataat atggataaaa ttttaaataa caatccaagt cttagctatg ctttttcagg
     4441 ctttatcaat cttttaggtg aaaccgtgca aggttttgct atggcagtag cacttgcttt
     4501 tgttttaatt tatcttgttt tagccgcact ttatgaaagt tttattctgc ctttaatcat
     4561 catgataacc atgcctttag cctttggcgg agcttctata gggcttttta tcacagggca
     4621 taatttttca ctttttgtac ttattgccat catcttactt tttggtatgg tggggaaaaa
     4681 tgctatttta ctcgtagatg tagctaataa aaaatgccat gaaggtttag atcccgataa
     4741 agctctttta atcgctggaa aatcgcgctt aagggctata ttgatgacaa cttttgctat
     4801 gatttttgct atgctcccac ttgctctttc aaggggtgcg ggctatgaag ctaattctcc
     4861 tatggcaata gccattatct ttggacttat aagttcgact ttgcttacct tactcgtagt
     4921 acctgcactt tttaaatttt gttttaaact agatagcaaa ttaagaaaaa tttatgagag
     4981 agaaaaatta aattaaccaa aatgattaat ttaatttttt taagtattat tcttataaag
     5041 tgcttttaag ttatcatagg cgatttgtat tttttcaaac tgttctcttg cgtaagcttt
     5101 ttctattgca ctttttcctt gatgaaaatc aggatgataa agttttacca aaatcaaata
     5161 tttttgtctg atttcactaa gatcattttg cggagtgcat tctaaagtat taaaataatt
     5221 actaaaaagc ttagctaaag cattaaattt ccatttcata ttttctttat tgtgaatatt
     5281 ttggcgaaat tttttatact cttcgcggtc aacttcaaaa ttcacgcaat attttaaatg
     5341 ctcgctctca tctgcaaaaa cttcaaaaag ttcaagggta ttctcgtttt tatattctaa
     5401 aattagaata tttgtcattt cattatattc tatattatga tcttgaaaat aatttcttat
     5461 ataagcaata aataattttt cattagagct taacttcatc aaaattctac ccgcaacaaa
     5521 atcaatcttg ataaacaaca taggcttaag catattattt tgctcaaaaa ttaatctaaa
     5581 agttttaaaa tgagcatctt gtaaattctc tataccttca tttgtgcttt tacgatattt
     5641 ttgatctaaa acttttaaga aataacggcg ctgtggaatt tcattttctt caaaaaaaga
     5701 aaaaatttta ttttttcgtc ctatgacctt tgtgaaattt ttggtaatca agtctttaaa
     5761 atactgaaat acgctaatat catctgtatt aacattgata gtttctaaag tttgcacgat
     5821 ttgcatctat ttctcccata aaacctcatt ttcaaaaagc tctttagtgc cttttaaaat
     5881 ttcattaggt gtataatcgg ctttataaga taaagattga cactttttta caaaataccc
     5941 aagataaata taatctaagt tcattttttt agctatttgt atttcattga gcaaagaaaa
     6001 tttacccaaa gaaaaatacg aaaaatcagg atcataaaaa caataaatgc ttgaaattcc
     6061 atcctctaaa atatcaatca aatcaacaca aacgagctta tcttctatat aaaatgcaag
     6121 ctcatatcca aaattcataa aaccatcgac ataaagatta taatactgtt taaagcttaa
     6181 atcataacgc ttccagttct ttttttcttc cataaaacga tggtatttat catataaaaa
     6241 caaatgttca ttgcttaaat tgggtgttct aagtataact ttggtgttaa tatttttatt
     6301 tacaaccctt ctttcacttc ttgaaaaatt atattcatta actaaaattc taagacttaa
     6361 acattcatca caatctttac aaatagggcg tgaaaaatac ctaccaaaac gacgccaacc
     6421 tcgttttatt agctcattat tgatttcttt agggcaattt tcaatgtatt tatactctat
     6481 tcttgaacgt ttatccttta agtaaggaca ctgatcttca agagtacaaa aaccaatctc
     6541 aagcattaaa ttttcttaat atctgcattt ttgataaatt cggaaaattc atcctgtagt
     6601 ttttcttgct ttaagaaaat ttcttgcatt tccttatcta tgtttgtttc ttgatttttt
     6661 tcgcgaatat ctttagctag tttttctaaa ttttttacac ttgcaccact cttgcttgat
     6721 ttcttcgcta attttgaagt attggtgtta gcttgcattt cttttttaat acttttaaga
     6781 ctgtctaaaa aatccatcta ttattcccta ctttctcgta tttttttaag cgtagcagct
     6841 attgcagcta taacttcttc tttattttct tgatgacgat cttctgtttt ttctaataat
     6901 tcttgcatat gtgtttctat gaaagaggtg tctaaatacc cccttctaaa ttctcttgtt
     6961 tttgtaatgg caattaaaaa tggtattgtt gttctaatat catcaatcac aaattccttc
     7021 aaagcacgct caagtttatt aaccgctaaa tcataacttg ttgctttaat aataagcttt
     7081 gcaagcatgg aatcataata aggcggcaca gtatagtctt tataaatatg actatcaacc
     7141 ctaacagatg gtccaagagc tgggtagtat tctcctattt ttccaggact tggaataaaa
     7201 tttttccata cattttcagc agtaattcta gcttcaatag caaaacccct aggtttaata
     7261 tcgctttgtt ctaagtccaa aatttctcct gctgcaatac gaatttgtct tacaataaga
     7321 tcaatacctg taatttcttc agtaattgga tgctcaactt gaattcttgt attcatttcc
     7381 ataaaataaa agcgattata atcatcaagc aaaaactcta tagttccagc atttgtataa
     7441 cctacagcct tagcagctgc cacagctgta acacccatgg tttttctaag attatctgaa
     7501 attccagggc aaggtgctat ctcaattacc ttttgatgtc ttctttgaat agaacaatcc
     7561 ctttcacaaa gatggataat atttccgtag ttatctccta aaatttgaaa ttctatatgt
     7621 ctgggattaa ctacatattt ttccataaat acttcatcat tattaaagta tgttaaagct
     7681 tctcttttgc aagattcaaa ggcattttca agatcttgtt ctttatgaac aacgcgaatt
     7741 ccgcgtccac ctccaccacc tgaagctttt aaaataacag gataaccaat cttctcagca
     7801 aaaattttaa tttcttccat gctataggaa tttaattttt cagtccctgg aacaataggt
     7861 atgccatttt tagccattaa cttacgagcg atatttttat ttcccatctt atggattact
     7921 tcagattttg gacctataaa aataattcca gcatcttcac aagccttagc aaattcgtaa
     7981 ttctcactta aaaatccata accaggatga atcgcatcag caccacaagc cttagcaatc
     8041 tcgacaatac gagcaacatc taaatatcct cttatagcat ccgttcctat gcgataagcc
     8101 tcatctgcga tttttacatg caaacattca cgatcaggct ctgtaaaaac tgcaacactt
     8161 ttaatatgta aatctctaca agcacggatt actctaacag ctatttcagc tctatttgct
     8221 atgagaattt tatggatttg attcataatt tgcctttttt gttatatttt tattgttaat
     8281 tttagcaaat tttccttaca aaaacttagc aaaaaattta atttatttta gttataataa
     8341 aactttttaa aattttaatt ccaataaaga aaagttataa ttataatggt tgctgataaa
     8401 agattatttt atttaagttg tattttaatc accataggaa tagtattttc atactctctt
     8461 acagctttta ctgttctttt tcttgactat agcgaatttc atttttttat tcgtcagctt
     8521 ttttttggaa ttagtggcat acttataatg ttttttattt ctcgattgga tcctgataaa
     8581 gcactttcta aaaaaattat tttagctatt ttgattgttt cttttatctt tatcatcatt
     8641 ttaccatttt taccttctgt attagcaaca gctagcggag gagctaaacg ctggatacgc
     8701 ttaggcccac tctctatctc tcctgtggaa ttttttaaaa taggattgat ttatttttta
     8761 gcatggagct atacaaggcg tattgatgat agcaaaaaag ctatcagaca cgaggcttta
     8821 attcttctgc cttattgcat cttagcttct atagttatag gatatattta tatcactcaa
     8881 aacgatttag gacaaagtgt aatttctttc tttttgattc tagctttagc tttttttgca
     8941 ggagctagta aaagactttt tgcttttgga actttaatca ttatgatgat aggtataatg
     9001 gtaattttta gtaaccaaag aagaattcaa agaatcgctt cttggtgggg gaatatacaa
     9061 gatgcttttt tacctatgct tcctgattgg ctggcaaatg ctttaagagt aagtagcaac
     9121 agcgagcctt atcaaatttc acactcttta aatgctatag cccatggagg aatgtttggc
     9181 gaaggcctag gacttggaac ttttaaatta ggctttttaa gtgaagtgca tactgacttt
     9241 gttctttcag gaattactga agaaatagga cttttaggtc ttggggttat ttgctatatt
     9301 tatctttgga tgattttaag aatttttaga attgcaggaa gatgtgaagc taaacaagat
     9361 tttatttttt gttcaggcat agccttactt ttactttttt ctttctttat gaatgctttt
     9421 ggtattattt ctcttactcc actaaaaggt gtagcggttc cacttttaag ctatggagga
     9481 agttcaatgt gggcaatttg cataggcata ggatatgtat taatgatttc aaaaaaggtt
     9541 aaattatgac aatagcttta acaggtggtg gaactggagg acatttggcc atagtgcgtt
     9601 gcttattaga aagtgcgatt aaaaaaaata tagaatgtgt atacataggc agtcaaaatg
     9661 gtcaagataa agcttggttt gaaaatgaag tacgctttaa ggaaaaattt tttttaagct
     9721 ctaaaggagt ggttaatcaa agcaaatttg acaaaatcag ttctttactc cacaccttaa
     9781 aactctccaa agattgtaga gaaattttta aaaaatacca catccaagcc gtttttagtg
     9841 taggtggata cagtgcagct cctgcatctt ttgcggcttt attctcacat ttgcctcttt
     9901 ttatacatga acaaaattca aaaagcggct ctttaaatat gcttttaaaa cctttcgcta
     9961 caaaattttt tagcgccttt gaaaaaaaaa ttagccctta tcctgtagca gataaatttt
    10021 ttgataatgc taggattcgc aaagaattaa aaaatattat tttcttagga ggatcacaag
    10081 gagctcaatt tatcaacgaa ctagctttaa atttagcacc aaaacttcaa gaacaaaata
    10141 tcaaaatcat ccatcaatgt ggaaaaaatg attttgaaaa gtgcaaaaaa cattatcaaa
    10201 gcttaaatat ccaagctgat atttttgatt ttagtttaaa tttggaagaa aaaatgaaaa
    10261 atgcagatct agctatatca agagcaggtg caagtactct ttttgaactt tgtgctaata
    10321 ctttgcccac tatttttata ccttatcctt atgcagctaa aaatcatcaa tactttaatg
    10381 ctaaattttt acaagatcaa gctttatgtc aaatttttat gcaaaactct attaatcttg
    10441 atgaattttt taagtcaata ttaaaactaa atctagaaaa tatttctaca agattgcaaa
    10501 atataaccca aaaaaatggc gcagatatgc taatccaaaa agctttattt gataatttga
    10561 cttttataag ataaatatcc aaagatattt actaaaattc caacaaaaac taacatcaaa
    10621 atagcaaatg aaaaattttc aaatttgtca tgcaaaaaac ctataatcca ttgtccttgt
    10681 gctgcaatta aatatccaaa accctgagct aaagcagaaa gtctcgctgc tatttgagca
    10741 ttagagcttt tttgtgcaat aaaaagcaac gcaatgccaa aaactccacc ccatggaaaa
    10801 cccatgataa aagcactgat aataatagaa attttactat caaaaataaa gagcatacca
    10861 aaagcgatca catacatact gcacaaacct gctatgtaaa aagtatgtaa attttgtctt
    10921 aattttccta aaagtaaagg gccaaaaaga gacactggag ctgcaacaag ttgagcaaat
    10981 aaaaccatac ttgtagaaaa ttctttatca aatccttttt ctacaacaat ttgaacatac
    11041 caaaaaaaca aagaataagc taaaaaactt tgaaatccca taaaaagagt aattttccaa
    11101 gttgttaaat ttgtaaaaag attgattttt ttatgagttt ttttcttaat acgaaaaaat
    11161 ctaccatttt tagcttgagg atagtaaact actaaagcta caaaagaaaa aatagcccag
    11221 aaaaacatag ctccagctaa atcaaataca ctaagcaaag gtatagctaa agcaataccc
    11281 ataatcgaag aaatactcaa aacaagacta taaattccca ttatacttgc catttttttt
    11341 ggaaattttt ctttaataaa actaggaagt aaaacatttg caattgctat accacagccc
    11401 attgctaaca ttcctaaaaa taagccatat acaccaaaat aagaacgaat aatttcgcct
    11461 aaaaaaatta aaaaaattcc aaaaacaata gcacgaatag gagaaaaata ccccacaata
    11521 aaagaaatac ttccaaaagc tatcaaagga agacttgtaa gtatgcccgc tacggttgag
    11581 tttaaataat acttatcttt aataatatca ataataggcc ccactgcagt aattggggct
    11641 ctaagattaa aagctacaat aataacaata gtaacattaa tccaaaatat ctttttaaaa
    11701 gaagccataa aagccttatt tgttaagttc tactttgaat attttacctt ctaccatctt
    11761 aggaatccat aaaatattac cttcaataaa tatatctgca ggacctttca tcaaaggaag
    11821 ttcaagtttt acagatttaa cattatctaa attataaata tatccattta gattatttcc
    11881 ccaagaactt accaataaac catctttata aggaactatt ccatcataag attctttttc
    11941 atttttaatt atactgagtt cttttgtatt taaatcataa gccattacaa caccgccact
    12001 tacaccatca ggatgataac cagctataaa aagcttatgt ttttttctat ctagatataa
    12061 cccatttgga ccgccaaatt ttgctaaatc aagttttaat aattcatcat attgcttagt
    12121 ttttaaatca acctttaaaa taagccctgt gccagtatcg ctaaccaaaa gcgtattgtc
    12181 gtctaatttt tctatgtcat ttaaaaagat tgcaccttta ataggtaaat taaaaatttc
    12241 ttttttagtt ttaagatcaa aaccgcgtaa aacatcgata tctaccacat aaagagtttt
    12301 tccaatctcc atcatgcctt ttggtgcatt aagatgggtt aaaaatttat attctagcac
    12361 tttgccattt ttatcaagct tagaaataaa tccatcatta tctttcgcca aaggttcaag
    12421 tttttcccct acattagata cataaacata gtttttatct acaaaaatac tttcagggct
    12481 tttaaaacca tcaaattctt gatattttaa ttcacttgca ccaagcaaac ttccaagaag
    12541 cgctaaactt aaaacatatt ttttcatatt ttctccttta tttaaaaata ttttcattga
    12601 attatattta tttagataaa aaaaatgtgc tagttttttg ataaaaaata caagtttttt
    12661 gttttttgat attgcttagg agtttgctca tatttctctt taaatctttc aataaaccaa
    12721 gctaccgaag aaaaagcgca ctcattagct atttcattga tatttttttt agaaaattta
    12781 agtaaaatct ttgctttttg caaccttttt tcatctaacc attttttagg actttgtcca
    12841 aaacatttct taaattcttt agaaaaagtt gctaaatcta atttcgcaaa attagacatt
    12901 tcatttacgc ttaaaaattc tctaccacaa tactcaaaaa gttgggaaag atcaaggcga
    12961 aattctttta aaattcctga taaaaaacta ataaaataaa tattcttatt taaaagcaaa
    13021 tgtaaaaaaa tctcttcaaa tttcaaactc actataggat ctaaaatttg cgtattttct
    13081 tcaaaatgcg gtgaaaaact ttccaaaatt ccttgcaaaa tcttatcatt ttttacccaa
    13141 aaaatttcat agttttgaaa cttttgatct agtttaaaaa aatctttata cttataaata
    13201 agctcaatta aaaatgcatt gtcaaaaaaa aataaataag cttcataaac tcctttacta
    13261 agtcctacat tgcttaaagt atagctccca gcttttaaaa acaaagtttc ataagagtta
    13321 atcttataat cttttgatgc agtgtgtaaa attttatatc ctttgcgaac aaaagttaaa
    13381 agatgacttc ctacattaac aaaagtagaa tgcgaagtat ccgtttgtgt atatttagca
    13441 aaagtgcaag atttaatttt tttataattg acacctttta attgctttaa atcttctggt
    13501 aaagaaagaa ttttattcat cgtaaatttt gcctacattc taaaagatac tttttaagat
    13561 ctttttcttt cattaaaatt tcacgcatgc aaacacctac tacatttata tctttaaaat
    13621 tttctatatt ttgagcattg ataccgccta tagcataaag tggaatttga ctaaattcaa
    13681 gcaaggattt taaaaaatca atccctttag gttctaaacc catcttgcaa gaactttcaa
    13741 aaatatgccc tacaaaagca taatttacct tatagctcat cgcctctaaa agctcttctt
    13801 tgctatggac tgaagtacca agtatatgaa aatattttgt taatttaggt tcttttctta
    13861 gcaaagaaag cggtgcgtga aaataacgat gtcccaattt taaacactcc ctatcaaaaa
    13921 aatgcaaaaa acaagtcact ttttgctttg cgcaaatgct taaaacttct tttgctaagt
    13981 cataatactc aaattcgctt aaatcttttt ctcttaaaac tatagcatct accttagcct
    14041 tagcaagttt ttcaatctgc tttaaaaagt ctatttctac acattttcta tcgcttatgg
    14101 cgatgatttt tttatcccac atagatacta tcgctcatca cagcttgtaa attggatctt
    14161 ttaagcatag ctaaaatttc atctacgctt ctatcatctg aaatttcaaa ctgctcatca
    14221 ccctttttct cacccttatg ctcacctata cccacactca ctcctgcact cattttagta
    14281 gcaccaagct tgataacctc atctctaaaa cctattcttt cacgacttga aatggtaatg
    14341 cccgcaaaag gcaaaaagag cctataagca caaagtactt gcaaaaggcg tttttcactt
    14401 acatctttag gatggatttt ggcattattg ataataggtc ttaaacgcgg cactgaaata
    14461 gaaatttcag catgcgaata agcttgttgt aaaaaatgtg catgaagcgc cgtagcaaga
    14521 gcgtcttttc taaaatcatc tatacctaaa agtgccgcaa aagccactcc acgcataccc
    14581 gcttttaaag ctctttcttg agcattaaag cgataaggaa aaatgcgttt ttcaccagct
    14641 aaatgaattt tagaatattt tagaggattg taagtttctt gaaaaacagt cacataatca
    14701 caaccctttt catgcaaaat tttatattca tcttcattca taggataaat ttcaacgccc
    14761 acaaccttaa aatactctct agctatttta caagcatttg ctatatattc tacacttgca
    14821 aactccctgc cctcgcctgt tagcattaaa atttcttcta aaccactttt agcaatggct
    14881 tgcatttctt cgtgaatttc agcttcattt agcttagctc ttgcgatttt attacctttt
    14941 tgaaaaccac aataaacaca tttagaatta caataatttg acaaataaag cggagtaaaa
    15001 agagagatag aatttccaaa atatttttgc ttgactttag cggatttaaa ggctaattct
    15061 tctatgaaat cttctgctgc acttgaaagc aaggctttta aatgctctat gcttaaatgt
    15121 gtttgattta aagcattttt aacatcttta gcgctaaatt gactctcatc atagctttga
    15181 acttgagtta aaaccttgtt taaaatttcg ctttttattt cctgcatgtg aggtaaatgc
    15241 tgcatataat cttgcataat caatccctta aaaagcctgt taatggagaa cttgctttag
    15301 cttcactcac acttgccaca cctgctaaaa aagccgctct tcccgcattt actgccaaag
    15361 aaaaagctct agccatcaag gctatatctt tagcttcagc tatggctgta tttaccatca
    15421 ctgcacttac tcccatttgc atagcttcac aagcttgtga aggacttcca atacccgcat
    15481 ctacaatgat aggcaaatca atttcattaa gcaaaatttg tataaattcc ttagcacata
    15541 aacctttatt actcccaata ggcgctgcta aaggcatgat agccgcagct ccagcatcac
    15601 gcatagctct agctgcgtaa agatcagcat gcatgtaagg taggggcgta aaaccctctt
    15661 tagctaaaag ctcacaagct ttaatcgttt cataattatc aggcaataaa tacctactat
    15721 cacttatcac ttctattttg ataagttctc cacaaccaag ctctcttgaa agccttgcaa
    15781 tgcgtaaggc ttcatcggcg tttcttgcgc ctgaagtgtt gggtaaaagt gtgatatttt
    15841 tagggatata atcaagtata ttagcaattt cccctgtatt tgcacggcgt aaggctagag
    15901 tgataatctg tgctttagct tcttctatag ctgattttat aagctctagc gaatattttc
    15961 cagaacctaa aataaatctt gaatcaaact cgtatttgcc tatttttaat ttatcatttt
    16021 ttaaattttc ttgcattttt actccttatt tgctaaaagc tctaaaacaa ggttactttg
    16081 atgtcctgcg caaatattta cccttggcgc cataagtcca tttcctagct tagcaccatt
    16141 taccaaatcc ccacacacat agaaattttt agcaattttt cttgtttgta tgctgttgct
    16201 atcaccatag cccgcaagcc ctgaagcgca gattaaaata ccatctttgt aaaatctatg
    16261 aaaattttgc gctatcattg cttttgcgat agcactatca aaggcttcac aaactatatc
    16321 tatatcttta aacaaagact ctaaattatc ctcatcgatt tttaaagtac aaatttcaac
    16381 gctgatataa ggattaattt cgctaatttg ctcttttaaa gcttcggttt taaacttgcc
    16441 caaatcactt acacgataag cctgacgatt taaattacta ggctcaatca catcaaaatc
    16501 aatcaacttt aaatacccca ctccacttct tgctaaattt atcgcaatgt gcgatccaag
    16561 tccgcctaaa ccacacaccg ccacgcgccc atttttaagt ttatcgtgaa gctttggtgt
    16621 atgtcttgct ctcatcatag catctagtgc gtcttttgga ggtaaagtat ttttttctat
    16681 acaaaaaagc tcatcatttt catttaaagc gatattctct tttgttgcaa aaccattgat
    16741 aatccataca tcattttcat ttttgctgat attttcaaaa aattccaaac ttgttttaaa
    16801 gtctgtatca agttctttgc cattgaattt tactctcatc atccacctcc tacaaaactt
    16861 acgatttcag ctttatcgtt ttcttttaaa atcaaatttt caaattcgct cttaggtaca
    16921 atctctccat ttaattccaa ggcgataagt tcgattttaa aacctttttc tttgataaaa
    16981 tccataaatt taagctcttt taactcaagc ttttgtccat tgataatcat tctaaacctt
    17041 taaaaatttt ctatcaagtc tttaaaaaca aggcaaagtt tttcaaattc ttctatgctt
    17101 actctttcat caatagcgtg aattctatca ttacaaaccc caaattctac tacctttaca
    17161 ccgtattttg caaaatacct tgcatcactt gtaccgcctt tggtattaag ctctggcact
    17221 tcatgagtga ttttttgaac gctttcattc attttttgaa cgattttatt atcgatattt
    17281 gtcaaaaaag cttcgcttga ttgttttagc tctaactcat agtttaaacc atgacaaatt
    17341 ttttctacat aactttttac atcttctaag cttgtatcag gggaattgcg tacattaaac
    17401 ataagtttta aatcatttgg cgttacatta cataccccca tacctccacg aatatcagtt
    17461 ataacgattt ttgaaggact aaattcagca cttccaggat caagatcaaa acccgctaaa
    17521 agctttaaaa ccggtgcaaa atcatgcaca ggattgatac atttttcagg ataagcaaca
    17581 tgcccttgtt ttccacggat taaaagtttt ccattgatag aaccacgacg ccctatttta
    17641 atactatcgc cgattttttt aacacaggtt ggctctgcaa ccacggcata atcaggtaac
    17701 atatctcttt cttgcatcca ttctaaaaca gccttggttc catatatagc ctcgccttct
    17761 tcatcacttg ttaaaataag actcagtctt gctcctttaa aatccgcatt ctttgccgca
    17821 tccacaaagg ctgctactcc gcttttcata tcttgagcac cccttgcata gataaagcct
    17881 tctttttcca caggcgcaaa agcattatta ctccaaccct cgcctgcagg caccacatct
    17941 acatgcccac caaaagctaa atgctcgcct tcatctttaa attttttagt gagtaaaagg
    18001 tttttaatgc cttctttttc tataaaaaaa gcttcaaaat cactcagttc catagcgatg
    18061 aaatttaaag ctccatcatc atttggcgta acagatttaa attttaaaag ttcgattaaa
    18121 aattcttttg cattcatttt ttatcctaag aaagttttat ataataaatt aagagcaaaa
    18181 tactctataa ttatagctga aattatattg attataaaaa caacttttgc actaaaaaca
    18241 tgactatatc ttgccaccac aaaggctaaa gcacttaccc aaaaaagtat agccacaaca
    18301 agccctaaag tcatcaaata agcatgatcg ctgcttaaaa ctacacttgc agcactaagc
    18361 caaaatccta tcacaaaagg atttgaacca tttaaaaaag ctcctttaat ataacttttc
    18421 aaaagacttt ctttaaattc tttatgctct aaatttaagc tttctttctt ttttcttagc
    18481 atcaaatacg ccatataggt taaaaaacaa aaaccaaaaa tcgccaaaga acgcataaaa
    18541 atgacattgt ctaagaaatt taaaagccca aattgaagca aaaaaagata aagcatatct
    18601 atactaaatg ctccaagtcc tacagctatg gaatttttaa aagcttttag cgcataagtt
    18661 aaaatcaaaa tatttacagg tccaaaaggc acactcactc caaagcccaa aaaaactcca
    18721 cttaaaaaag aatcaaacat taccatcttt cataaaattt tctatatcaa gtgcgatttt
    18781 atcaatagcg cttataatat cttctatata gattttatca aaataccgct ctaaattcgc
    18841 atctttttcg tagatattta aaatactttt ttcgcacatt gaagcataac gccctacagg
    18901 caaaaccgcc ccacttgtgc ctatgctgat aaaaagcgaa gtttgattta gcaaagaata
    18961 aagcgtagca taagcaggag cttgctcttc aaacatgact atattgtgtc ttaaatcctt
    19021 gcttttgcat tttgggcatt gtttatctat gattttttca taacctatat taaaaatttc
    19081 ttcgcatttt aagcagcgaa gttcaggtaa aaagccatgc aaatgtacta catctttaca
    19141 ccctgcacgc tctagcaaat catctacatt ttgcgtgatg acaaaaaggt ttttacccca
    19201 tttttctttt aactgtgcga ttttttcatg agcatgattt ggctttacat tttgaagttg
    19261 tgcccttctt gcatcgtaaa aatcaagtac ttttttagga ttttttctaa aacctgttgc
    19321 agagcaaacc tccatcacat cgtattcttc ccaaagtcca tcattatctc taaaagtttt
    19381 aagcccactt ggagcagaca aacccgctcc gcttaatatc ataatgtttt tcatcgctaa
    19441 accttataaa atttacaaag tttagcgaaa aatgctttaa gaaaataaat atttttgcaa
    19501 gattttttct ttttcttttt ctaaaaattc taatttaaga ttaagaagat caatttgttg
    19561 ttctactaat tcaatgtttt gaacaatttt ttcttgaatt tctaacggtg ggagtgggat
    19621 tgtaagattt tcataaaaac ttataggaac tcttttgtgt ccacttgctc cagtcatagc
    19681 aagagctgct ttttctctta tattttgttg atttagatta tagaataaga aactactatc
    19741 aagccctgtt tttgctctaa aaatatgaaa ttctgtgcta ccaaaaccta tgttatttgt
    19801 tagatttttt gcgatagcac atttaccatt ttccatgcaa ggagtaattt ttgcaatcaa
    19861 aatatcattt tctataaaat atgtgtagcc ttttcttact tcgtttaatg acctatctat
    19921 cttactttga atataaccct tatctgaaac gctagccatt tctataaatg agacaagcat
    19981 attttcatca agttttgata tttctttttt gctaggatta agttccatat attgttcatt
    20041 ctttaaagaa attctcttcc agccatcttt tggtggagtt gagagagttt gtaaaagctc
    20101 ttgtatagtt ttagaaaagt ttttaaaagc attaaaatct tgctttcttt ccttgctttg
    20161 agtttcttca actaatactt cagaatgact gatttgttct tcaattagcg aaagcaaaag
    20221 attaaaatca agcttagatt ctaatttttg caaattttct aaaatagaat ttagttcata
    20281 ttcttgattg tcctctataa taccagattt ttgaagcatt gctttgatta gcttttgata
    20341 ctcttttata ctcaagctta aagtattatg ctgctcttct atcttttcac actctgctac
    20401 gatttgtttt tgaatttcaa gcggtggaag tgggatttta aaactataaa aaatattagt
    20461 atcaaactgt ggatactgtt gtccttgttt atatagtttt tgtccgcaaa tttctaataa
    20521 aatatacaaa aaatcaaaaa taatcttgct tttatcttta acactcaaaa tatgattatt
    20581 tgctgaaaca aatttacctt tatgtttttt aatatttgca tatcttgcca ctcctaaagt
    20641 aattacttca ccttcgttta taaattgtcc agctgttttt tcatctgtcc accattcgta
    20701 gtttttagaa cttggtaaaa gttttacatt tccactgttt aaattcattt tttcgatttc
    20761 tgtcgcacta gcttgatttc taattttatt taaatcacac acttccccta atctcaccaa
    20821 ctcatactta gaattcttaa aaggatttaa ctcatctctt gattttacgt ttaaacttat
    20881 agctttatta aattccactt tttcaaaatc catcatatca ataagcctcg ctttactagc
    20941 atagccttgc aaatcttttg gtatatcgct aagagttttt aaaaatgctt tacaaattaa
    21001 agtattaagc ttagtttcat tttgcggatt gcctctttca aaaagtgggc tcaaataagg
    21061 ctcgtgcaat tcttttaaac cttcatcacc ttttctatta ctccactcat aacctaaaaa
    21121 tttcttttgt tcttttatat cacttggaga ttttatgatt aaaacttctt gattaagact
    21181 tagacaaaaa taaagcaatt tatccttttc tattgcttga gtataagcta aaaaggcttt
    21241 atcttctaaa tcttgcttat ctttactttc tttataaatt ttagattctt taagtttttt
    21301 ataatcactt gtttgcctaa atgcattgcg ataatcttta aaggcttcta gctctgcaag
    21361 tttagaatct aagtttccat ttaaaaaatt gctataaagc tctttatcaa attttctaaa
    21421 atcacaatac gcacttagat aattttgata aaagttttca ttgtctttta aattttcagc
    21481 ttctatgcgt tctttaatca aactataatc ttgagaaata agatgatttt cttgtttaaa
    21541 agtttctttt ttgcgtaaaa ataaaataat cgtatttgtc cctgttgctc caaatgtttg
    21601 attacctagc tctacaatgg caataaaatc aaaattttga aataatattt ctcttgtatt
    21661 tttataaata gaatctttat ttaaaataga acttggtaag ataatagcag ctttagcatt
    21721 atcatttaaa atttgatttg ctcgctcaca aaaaaagcat tcgatagaat tatttgtttc
    21781 tatgtttata tcatcgttaa aaagtttata ggtattctta gatttatcac ttaaagtttc
    21841 taaaaatcct tttacagaat aaggcggatt tgctataagc aaatcaaaac tatttgattc
    21901 tatttgtggt tttgcttttt ctccttctaa attatttgta tttgctaatt caaaagaagc
    21961 aagtgcatca gcgtataaaa tattgatttc attttgtcca tacattgcac ttgatacctt
    22021 agaaacctta cttaagcgat actctttttc aataccataa atatttttat aatgctcttt
    22081 aagctcatct tctgttagat aacgcttaag ctcattggca taggtgttta aaaaatgtcc
    22141 agcaccacaa gcataatcaa tcacccttaa agctttagag cttttgctta acatttcttg
    22201 aagcggtaaa gaatacataa taaattcaca aatttgaata ggggtaaaaa actgcccttc
    22261 atcttgcttc ataccttttt gcaaaaaaag ttcaaaaaga ttgcctaaaa attgatttgt
    22321 agagttttgg gtaagcttgt aatttgcaaa aagctctact atttctttta atacaagtgc
    22381 attttttaag aataattctt tattatgcac ttctaaaaat gcaaaatcat tatttgaata
    22441 aaattttaat tctttgatgt aattttgcat tacttctttt aaagttttta tctttaattg
    22501 cttaaagtct ttttctatat cttcattaga tacaaaggta attttctctc ctaagaattc
    22561 tttcatagct tctttataaa gccacattaa tctatcttgc atatttgcat aagtatctgc
    22621 cattacacca aaatatccaa atttgagatt gtttttatta aaagtttcat cataaatttt
    22681 gcaaagaaaa atatttacaa gtttatcaaa ggcattttcc ttgcctgata tattatgctt
    22741 gcgtaaaatt tttgcaaatt cgtgatattt accttcttct ttaagttcct taagattatc
    22801 aaaagttgga gtaatttcta aaattttata agcattgaca ttttcttcaa aaataccttg
    22861 tttaaaatat tgcagttcat aactttcttt ccaagtttta aaaagttcta tattgttatt
    22921 agatttttta taagaatttt gtaattcctt ttcttttaga tattcttcgt tatcgtaagc
    22981 ttgtatgatg taatttttat attctaactt atcgctaaaa tcacttgtat aaagacaaag
    23041 atattttaca cctttttctt gctgaaaata agaaaaaagc tgcccgccat cttcttgcat
    23101 tctattccat tcttttataa attcactatt tttagaatct gtggttttac attctataat
    23161 caaataagga ttgttttcat tatcctttac taaaatatca gccttaccac cttttttatc
    23221 cctgccaaga ttccattttg gctctaactc taaatattca gccttgtaac ctttttctaa
    23281 aagtctatgc acacattcaa aaactacaaa attttcaggg tgtgaaaaat tagaagtagt
    23341 tttatcgtga atttttattt cttttgggta attaatactt tggtttttat aatctattaa
    23401 aagagtgtaa ttattgattg tttttacata attttcattt ttatttttaa agcctaagtt
    23461 ttctagaact tgttttaaat tatcttttgt aatcatttat ttccttataa tctcaccacc
    23521 ttagcaccaa agccaccttg attgatcggt gcgtcattaa agcccttgac acttttatga
    23581 gttttcaaaa actctcttac agcaaaggca agctttcctg ttcctatacc atggtaaact
    23641 aaaacttcat caaagcctgc aagcaaagca tctgaaataa atttatcaag ccttgaaata
    23701 gcttcatcac tcctaagccc atgcaaatcc aagctaacgc taagattagt cggttttgcc
    23761 acactaatgc ttgtttttgg acttatttta ggtgtaggag tgcttttttt aagcagtttt
    23821 aaaggcacac gaagtttgat cccatcactt tcaaccatag catcgttttt agaaatgctt
    23881 atgattttac ccttaatttt ttcatatttt acaaaatccc ccacacgcaa ttcttcgttt
    23941 tgctccatac ttggcaagat gatttctttt ttaagttcat tggttttatt aagacttctt
    24001 tgcttgtctt ttatatcttt aagctgtatg gtttttttag cttcttctat ggctttgtgc
    24061 aatttaaatt ctaaatttct caaactcgta cgaaattctt gttcattttt ttctttttgc
    24121 tcttttaaag aaagtaaaat ttcatcgact ttttgctctt ttttctcaac attttcaagc
    24181 ttagctttta gttctaattc aagattgata tttttaccca caagctcttc taaattttct
    24241 ttatcctcgc cataaagctt tttagcctcg ctaactaaat tcggcggaat ctgataacgc
    24301 aaagcagttt caaaggcata agattttcct atagtacctt ttaaaaactc atattttggg
    24361 cgtgaaagct cttcatcata taaagcagca atgagttcaa cttgctcatt ctttgctaaa
    24421 agcatggcaa ggcgtttgtg gtgcgtggtg atgatgattt taagattatt agctatgagt
    24481 tttgaaatta acacactata caaacaagcc gcttcttcaa aatctgttcc aagctctatt
    24541 tcatcgatac ctaaaagcaa atttttctta gaaaaaagcc tggaaaagtg caacattctt
    24601 cctgcaaaag ttgaaatgtc gtttttaaca ttttgcggat cttctatgat ggcatcaaat
    24661 tctttaaaag taccaatttt actttcactt gctttgatat gcataggcaa aagatgttta
    24721 gctaaaaatg ctgcacttag catggatttt aaaagcatgg attttccgcc tgcatttacc
    24781 cctgtgatga ttaaaacttg ttttttaaat tccaaactca cgctttttgg attttttaaa
    24841 gcaggatgag cgaaattttt aagaaccaaa tctgtacttt gatcacacaa aacaaattca
    24901 aaatcccttt ttttagcaag caaaacccta gcactataat gatcaaaaag atcaaaggct
    24961 gtattgataa attttaaaaa aggtaggttt tttgctaaaa aagctgagaa atttttagcg
    25021 tattcataat aaatttcttc tttttgattt ttgatttttt ctatatcatt ttgcaaattt
    25081 tcaacactta aaggcacgat ataaaagcca ccgccactac ttctacctat gatttttgct
    25141 ttaatagcgt gattaaaccc gcctcttaca agcaaggctt caagattgtt tataagatgg
    25201 atttgtgtat cgataagata aggcattaaa gcttttgtat agcaaaattt cttaaactca
    25261 gctattatgc tttcattttt taatcttaga gcggcattaa gatttacaag tctttcatct
    25321 aaactttctt ttaattctcc tttctcatcg aaattcaaac aaagctccaa agccccgcta
    25381 acaaattcta tcttttgtag ccaagagcct aaatttgttc ctagttttat tttttttaac
    25441 ttttcaaaat aacgaaaaat ttttacaaat tcaaaaattt catctaaatg taaaattcct
    25501 tgcttactta aatgtactaa ggctttatca agattgctaa gctctggcat agtaggaaat
    25561 tccacctcac aaagctcatg tatgcgttta aaatggagat tagaatctcc ttgcaaaaaa
    25621 atctccttat ctcttgcaaa aagggcttta aactcttcta aatagctgtt taaatcaagc
    25681 tttgagatca attcttcttt tgtatcattc atcatttaac ctacaatctt taatatctat
    25741 gattaaagaa ttaaaacttt gattattatc ttttgaaata aaacttcctg taccaaattc
    25801 ataattaaaa tacgccttag aaacattgat atctttacat aaaatatttt tattttgatt
    25861 aaaagctacg ataatatctg ttcttaaatg acttttttgt gtgttttcaa attcaaaaaa
    25921 taccgctaaa acaataaaaa tcacaagtaa aataccaaaa aaaggtttgg tttttttacc
    25981 taatttttca cgcaaagcaa aagtgattaa ggctaaaatt aaaataatta aaaaatataa
    26041 aaaaaaccta ctcatttttt tgccttaatt tattactgat atctcctgcg ccaaaaccta
    26101 taataagccc ttcttcaaaa acctgcccct tagaagccac caaaaattta ccctctcttt
    26161 tgatatcttc tacaaataaa gccttaggaa aaaccgcctt taaatcaagt tctataggct
    26221 cttctcctgc agcataaaca ggtaaaatta taagctcatc aacaccttca aaagcctttg
    26281 caaattcctt taaatttgca gccaaacgcg tgtagcggtg gggttcaaag atagctgtga
    26341 tttttttata tccgcctaat cttgcgtatt cttgtgctgc acttaaagtc gcttttattt
    26401 cggtaggatg atgaccataa tcatcgatta aaaccaaatt ttcatcagca tgtaaaatat
    26461 caaaacgctt tttaatacct tgataatttt taagcctagt tcttatcgtt tctatatcta
    26521 agaaatttaa agccgctaaa atcgccaaag acgcatcaag ggctaaatga tatcccatgc
    26581 caaaaacttt aaactcacct aaatctttca actcaaagct tgtaaaaggt ttgaaatttt
    26641 ctatacacat ggtgcagttt ttgatatctt tacttggata aagcttgatt gactcatttt
    26701 tataattttt caaaaactca tcttcagcat taatcacgcg aattttagcc gtatctaaaa
    26761 actgcgtata agcataatgg agttttgaaa cttcattacc ataatgatct aaatgctctg
    26821 cttctgcatt agtaactata gccaaataag gatttgaatt taaaaaagaa ctatcgctct
    26881 catcagcttc aaaaacaagg ttttgacttt ccttataaat catatttgaa ccaaattctt
    26941 ttaaaatcgc tccgatgatc acagaagcat catcaagtaa agaagctaaa atacttgaag
    27001 tcgtgctttt tccatgtgct cctgcaactg caaaaacacg cttatcttct aaaataagag
    27061 gtaaggcttc cttgcgtgaa agacacttaa tacctaattc tttagcgtgt ttaaattcag
    27121 gattttcttc tttgatagca gcagaataaa taactaaatc tttgtttaaa atattgtctt
    27181 tatgatgagg gatactgacc ttaacccctt ctttttctag ttcgttagtg attttacttt
    27241 ctttaagatc acttccgcta atcttaaaac ctttttcttt taaaaatctt gctaaagcgg
    27301 aaattcctat accgcctatg ccgataaaat ggatattttg catcatttaa acctttatac
    27361 tttaaaggct aaattttagc acttttttac taaaaagaaa atataaatcc tattttgaaa
    27421 tgcctaaacg ctcggctaat tgatataaat ttaactctct ataaaattta tcaaagtctt
    27481 tagtataaac atcaaggtta aaagctttat tcatatcttt taaagtatca ttactttcaa
    27541 aataataccc tttaccgcca ctataaatac cttttttatc aatccataca gcatcgttaa
    27601 tcccaaattc taatttctca tcacttggtc ttgctaacat atttcttccg cctacgctta
    27661 aatacttaac attatttaaa cttaaagcat aaagagttgg aaaaatatct ttatgagatc
    27721 ctacacgatc tttatcataa taaatatcat cttgtaaatc cttaggaata taaagataaa
    27781 aaggtacact ataagcaaaa gctttttggg aatttaaatc tatactcatt tcgcgtactc
    27841 tatgatctcc agttgctgct ataatgacat tatctttaaa agaactttgt tttactttat
    27901 ctagaaattt tccaaattca ttgtttgcat aagtataagc tttgataatg ttatcttgtt
    27961 tatctttttc ataaggaagc atattaagca aagtttgcgg aatgttttgt aattttggca
    28021 aatcattttg tggaatttta taaggtggat gattagaaat agtaagagca attataaggg
    28081 tgttgtgtgg atttttttga agtaagtcat aaactttttt atataaaaac tcatcagcta
    28141 ccccataacc attttcgcta tcttttgctc cattatactc tttcattaaa atattttcat
    28201 ctataatctc atctaccccc aaaatactga gataattttt aatattttgc caagatccat
    28261 tacctgcact tacaaaaatc accttatatc ctgctttctt ataaatagca ataggtgtta
    28321 aatctaaata agttttctga aatttacttg tggaaatatt agaaaatgga cttacaaaaa
    28381 ataagtttgc aaaacttggt atagttccat tactagaact caaaaagcgt ttgaataaaa
    28441 aatcttgctt aaaatgttta tctaacgaac ccaaaaaatt atgttctgta tttgtaaaat
    28501 cagccaaatt aagcccaaaa ctttccatta agttaacaaa tacactagga tgattctttt
    28561 cagcttttag atttatagga ctttgatgca aataatcaaa aagtttttct ttaagttctt
    28621 gtgcttttaa aggtgtgata gccttcaaag ctgcttcttc tttatattgt tttaaagccc
    28681 aagaaaatgc cataattgga tttaacattg tatcatttac aacactatat tcgctaaaag
    28741 aataattttg cacatttata gccacatgct taaatggacc ccttaaggct ataacataaa
    28801 caataattaa tattaaattt aaagctatca agggaaataa tcttaaatta acaggtttta
    28861 gctttaaatt taatattttc aaatttaaaa aaaatacaaa aactccaaaa atcaacatta
    28921 aagctaaaat ttttaaaatt ggataatcgt gataaataat acttaaaata gtttttgcgt
    28981 tatcatcttt tagagtaaac ataaaaatat caaatttagt cttgtaaatt tcgtaataat
    29041 agtattttgc ataagaaaat cctatacaaa gacaagaaat aacaattata t
//
LOCUS       DAPIVO010000012        28994 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.012, whole genome shotgun sequence.
ACCESSION   DAPIVO010000012 DAPIVO010000000
VERSION     DAPIVO010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 28994)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28994)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28994
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.012"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..632
                     /locus_tag="RJ239_000535"
     CDS             <1..632
                     /locus_tag="RJ239_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="highly acidic protein"
                     /protein_id="HDV7330673.1"
                     /translation="NKELQANISDFDDLPVVEEQEKEMDFDDLPEDAEFLGQAKYNEE
                     SEENLEEFAPVVEEDVQDEIDDFASNLSTQDQIKEELAQLDELDYGIDSENSSKVLED
                     FKDEPILDDKELGTNEEEVVVPNLNISDFDALKESDIQEALGEEILEKNEEPIASDAT
                     KDDNSEEIVNELSQSIAGAITSSIKDDTLKAALKGMNMNININISFKED"
     gene            629..1252
                     /gene="gmk"
                     /locus_tag="RJ239_000536"
     CDS             629..1252
                     /gene="gmk"
                     /locus_tag="RJ239_000536"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDV7330674.1"
                     /translation="MKLQGFVLLISGPSGAGKSTLLKKLFDEFEDELYFSISSTTRKP
                     REGEKNGIHYHFISHEEFQKGIDSDHFLEWARVHENFYGTSLKHTQNALDNGKIVVFD
                     IDVQGFKIARKKMADKIVSVFITTKNKDELKKRLIKRNTDTIIQLEKRLQNASDEMKE
                     LSEYDYLIINDELKQSYEALRAILIAHKFRTKGQNLGQIQNIWNEGE"
     gene            1254..1493
                     /locus_tag="RJ239_000537"
     CDS             1254..1493
                     /locus_tag="RJ239_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HDV7330675.1"
                     /translation="MGGWSSPSHWLIILLIVVLLFGAKKIPELAKGLGKGIKTFKDEM
                     NNDDEVAKNTQKIEENKNTTNNTNADASIDETKKA"
     gene            1505..3097
                     /locus_tag="RJ239_000538"
     CDS             1505..3097
                     /locus_tag="RJ239_000538"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HDV7330676.1"
                     /translation="MKSIIFNEIKKILECDFALENPKDKNLAHFATPLAFSLAKELKK
                     SPMLIASDLASKFQNHDCFESVEAVNGYLNFRISKTFLNELANQALTNPNDFTKGEKK
                     QESFLLEYVSANPTGPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLL
                     GLSILLSVKENTLHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSEENIPSLADWAK
                     DKMLVLIKQNLEQAKIKIDNYVSERSYYDALNTTLESLKEHKGIYEQEGKIWLASSQK
                     GDEKDRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFL
                     GFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCD
                     THLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQSLNQDGVNL
                     LFEALNLKAILNDAFEARALQKIPDYLKNLAANFHKFYNENKVVGSANENDLLKLFSL
                     VALSIKTAFSLMGIEAKNKMEH"
     gene            complement(3115..3423)
                     /locus_tag="RJ239_000539"
     CDS             complement(3115..3423)
                     /locus_tag="RJ239_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDV7330677.1"
                     /translation="MYIFIIILSALLDIVANLLLKKSDGFKHKIWGLAAIANAILAFF
                     LLSFSLKYVPLSIAYSTWGAIGIIGTCLGGWILYKEKLNKIGILGIIIVIIAVFLLNY
                     "
     gene            complement(3423..3764)
                     /locus_tag="RJ239_000540"
     CDS             complement(3423..3764)
                     /locus_tag="RJ239_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDV7330678.1"
                     /translation="MNIAKKELFVAWFFLIAAIVFEVLGTSFLKMENQILGYIFMALF
                     IAFSYFFMGKAIKKIQVGIAYAVWELLGIILILLVSFIVFKESLTLTQILGIILSIIG
                     IIMINIGEVKE"
     gene            3873..4580
                     /locus_tag="RJ239_000541"
     CDS             3873..4580
                     /locus_tag="RJ239_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDV7330679.1"
                     /translation="MGRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGTDPDMN
                     PKLRSAIATAKANNMPKDNIDAAIKRASGKDSADIKNIHYEGKAAHGALVIVECMSDN
                     PTRTVANVKAIFSKNGGEVLQNGSLGFMFTRKAVFHLEKFAGDLEELELDLIDAGLEE
                     LEQNEEELVISGDYTAFGELSSAIEAKGLVLKKAGLEYIPNNPVSFSEEQLSDIEKLL
                     DKLEDDDDVQAVYTNID"
     gene            4590..5072
                     /locus_tag="RJ239_000542"
     CDS             4590..5072
                     /locus_tag="RJ239_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDV7330680.1"
                     /translation="MIKTIDTSKVNEYKFALIETEKGTMKLKLFGDEAPQTVCNFATL
                     ANEGFYKDLNFHRVIPNFVIQGGCPHGNGIGGPGYEIICECDDQEHKHERGTLSMAHA
                     GRDTGGSQFFICHSPQAHLDGVHTVFGQIDPKDEESLEVLDSIRQGDKILDIKICDKI
                     "
     gene            5236..6657
                     /gene="omp50"
                     /locus_tag="RJ239_000543"
     CDS             5236..6657
                     /gene="omp50"
                     /locus_tag="RJ239_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane tyrosine kinase"
                     /protein_id="HDV7330681.1"
                     /translation="MKTKFSLILSACLLSSSLFAKNTDDEITKLQKQLAQIQAELAEI
                     RKEREAQAKQNEAVKAELADLNDRADETEFQAALSKVKFGLEFSTAVSNTNYKVSGQD
                     YSANNKWMNELHLNMNADINDKTKFYGRLSMAKNWSQMGWSGSPLDLDAGRNTRSSGP
                     VLYVDRAYLDYYITPEWIATIGRQPGTDGPGSNLRNNALRQSTYPALAINALGDAAVI
                     TYKPESLQDHKVAIRAAYGKTYQWDEESGKVRDWMSDQKDADANLYYAAVEGELPIEG
                     MGDNLIIFNVAHMTDFALPIPGSMLLGDDDEVVNLGNLTLANIHFENYKAFGTNFNWF
                     ASLGYSNGSNNEINPLLSIALQSKGYGNGKFNEKDGYAVHVGGRYDFTKALKVGYEFF
                     WGSRYWYTMSRPSINDPLNIRMTRGTAHDFYVIYQLDRYQFLRLSYTNIQNIWGNRGL
                     PFGGAKKDKARADNIMLMYNVKF"
     gene            6668..6895
                     /locus_tag="RJ239_000544"
     CDS             6668..6895
                     /locus_tag="RJ239_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330682.1"
                     /translation="MRKILFASLLPIIALADCASLMAKYEAPEPESKTMKQVERWINK
                     KVSDPADAAVLKECMIARAADNPNQVSVAGK"
     gene            6976..7578
                     /locus_tag="RJ239_000545"
     CDS             6976..7578
                     /locus_tag="RJ239_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDV7330683.1"
                     /translation="MQEIISFIVETASAWGYLGIIILMTLESCFIPFPSEVVMIPAGY
                     LAHKGELDITLCILSGTLGSVLGALINYYICFFWGKNFVLKWGKYFGINEVKFAKFEE
                     FFNKHGEFSTFTCRLLPGIRQYISMPAGLVKMKLINFILFTALGSAIWVAILVFLGYY
                     IGQNEELIKTYLTQILIIIIVFVILASLIYIKIKKPFKKA"
     gene            complement(7537..8502)
                     /locus_tag="RJ239_000546"
     CDS             complement(7537..8502)
                     /locus_tag="RJ239_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002916444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HDV7330684.1"
                     /translation="MAKIGIVGLGYVGSASAYSIATQGICSELYLYDIKQDLALAHAR
                     DLEDMSAIHFSYTKIFHVPNLENLASCDIIILAFRKESLKELPSRLVELQNNILELKD
                     IVLTLKNANFKGKYIVATNPNDTITYYTQVLSQLPKNHVFGSGTNLDSSRLKKFLAKD
                     LNINSKDIFACMIGEHGDSQFAALSNASVLGQNLLDFYKQKLGKDLDIQELEKAVISE
                     GYFIYERKGRTEFGIGTSCANLAKAILEDRKSLHPVSVVFDDIAFSMPAIIGKDGIEK
                     VFELKFNEKEKTKLENSKQQIKNAIQSVKDKNLSLFKRLFDFDIN"
     gene            8569..9345
                     /locus_tag="RJ239_000547"
     CDS             8569..9345
                     /locus_tag="RJ239_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HDV7330685.1"
                     /translation="MEKPDIQRLTNFLIVYTKTLLGAGTYTARVAKCVGRIAEVYGYE
                     ININFFFHHITLNVVDMDDNSIQRTYVIPNHHAHVNFKLIFDLSALSWAIYDHKYDLE
                     KAKVVFGQISQQKKHSYLLNLLFVSMANSAFCRLFGGDFGAGNLVFFATFVGLLLRYI
                     LTKAKIDLRIQYILCSFISSWFVFFGLDMGYTNTSDVALGSSILYLIPGVFFINSVID
                     ILKDHILMGLSRIISVAILICCIALGIYMTLSISDFGILR"
     gene            9342..9836
                     /locus_tag="RJ239_000548"
     CDS             9342..9836
                     /locus_tag="RJ239_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HDV7330686.1"
                     /translation="MIEFILRDMFFAAVAGFGFAYACNPPLKTLILSALLAAIAHGLR
                     FTLVEYFHFQTLAIATFVASFCIGCLGIVLAKIIKTPAEIIAFPALIPMIPGIYAYKA
                     ILYLISFIRSDDLKAKSEFLVQFFDYFFTTVSVTLALAIGVSVTLLIFFEQSFMMTRH
                     AKKH"
     gene            9906..10169
                     /locus_tag="RJ239_000549"
     CDS             9906..10169
                     /locus_tag="RJ239_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HDV7330687.1"
                     /translation="MLCPVCNVDLVMSDRSGVEIDYCPKCRGVWLDRGELDKIIERSV
                     PNTANFNQAPRQESRYNDSAYHQHNDYYKKKKKESWLGELFDF"
     gene            10245..11195
                     /gene="czcD"
                     /locus_tag="RJ239_000550"
     CDS             10245..11195
                     /gene="czcD"
                     /locus_tag="RJ239_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family cation-efflux transporter CzcD"
                     /protein_id="HDV7330688.1"
                     /translation="MYKFLSHEPLANKSCHHNHEEHSHEHHHSHADARSVDKKILKIS
                     LLMTFSMMLVQFIYSILSNSLALLSDTLHMFSDVFALALSFLAIIAVEKWQDHQKTFG
                     YFRLEVLVAFINALTIILSALFIIYEAIEKFINPKEIDAKTMIIVAILGFLVNGINAL
                     MMFKGANLENVNMKSAFLHMMSDLLGSLAVIIGGIVVYFSDIVYIDTILAIVLSILLL
                     RWAIILLKQSANVLLESSPVDIEKVRQVLLLNPSVDEVVDLHITQITNKMLVASMHLK
                     VRVCNLKEFEKLSQDLSHKLLHEFEIGHITIQPIRSENEI"
     gene            11185..11379
                     /locus_tag="RJ239_000551"
     CDS             11185..11379
                     /locus_tag="RJ239_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal transport/detoxification protein"
                     /protein_id="HDV7330689.1"
                     /translation="MKFKVKNVNCMNCVNLIKNSLEDEFGNIEVDLEQKILSLNLEEN
                     QVSNFTKEFQDLGFEIVERL"
     gene            11379..13484
                     /gene="copA"
                     /locus_tag="RJ239_000552"
     CDS             11379..13484
                     /gene="copA"
                     /locus_tag="RJ239_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase CopA"
                     /protein_id="HDV7330690.1"
                     /translation="MEELRIKIGKMTCVNCSNAIERACKKIDGVKDASVSYVNSSGVF
                     LLEDQKKRKDIIAKIKNLGFEILEDEQSLNAYKAKKHLELRKNLLLSIVLSVIIMYFE
                     MFVKSSFSQNIQMALSFFGIFYCGRDFFSHAFLGFKSKNLDMNTLVALGTLSAFVYSF
                     LVYLQIFKEEDLYFSGAMMIISFVLLGKYLESKAKFKAQDYQRILENIDTKKTKILLE
                     DESIKEISSSFVKSGDVLLVKEGESIVADGVVLLGSAELDMSFLNGEFLPVLKKEGDE
                     VQAGAVVLNGALRIKANKKAMDSTLEQIKNLVFEAGSIKSPLANLADQISKYFVGGII
                     FFAFLVFVFWVLKADLNTAFLHSCAVLLISCPCALGLATPIALVVASANAAKNFILIK
                     NPAALEKLALVKYAFFDKTGTLTKENLSIFKHNLSKDDFDKLCQIESLSSHPIAKALH
                     KDHFFDLKGEGRVIVGSGIKYKEDNDIYLAGSAKFLHENEIDTKESDIFFDTFKEYIR
                     VYFAKNKKCLGGVLLSNALKDGAKELVLNLKKQNLKTFILSGDHVKNVEKIAKELQID
                     EFHAQLKSEEKLQIIQKFEKTLFVGDGINDAAALSAASVSISFSKANELAKKTGDFIL
                     IKDDLSAIFKCFKLAKKTRSIIKLNLFWAFIYNVLCIPIAAGFVPFIALSPHIAALAM
                     CFSSVTVVFNSLRLRKSKP"
     gene            complement(13474..15375)
                     /locus_tag="RJ239_000553"
     CDS             complement(13474..15375)
                     /locus_tag="RJ239_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002882950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HDV7330691.1"
                     /translation="MQRRDFLNGMALAVVAGMTPLQLLYGKDSKIEDFTKEYYPPNLL
                     GLRGSNNKSYKYAHMLRDGDKFGFSSIKPKENYDLVIVGAGISGLAAACFYQQKFGEN
                     KKILILDNHDDFGGHARRNEIQLDEGTILSYGGSESFQSPKALYSKEVIELLKSLGVS
                     IDELAKRFDVNFYPDLKLSRGVYFSKENFGVDKVVNGNPRKVICDDIPDSKNNGKSIE
                     NFIKDFPMTSKDKRELISLFKSNKDYLKGLSKEEKEEYMAKTSYKKFLEEKVKLSQKA
                     ITFFEGMTDDFLALGIDAISCEDARISFLPGFDKLGLDPIEGEALAEMEEPYIYHCAD
                     GNATVARLMVRKLIPTVSQKGKDMDDITLAHFDYSKLDDSNNKVRLRLNSTVIHVENT
                     KNGTLISYINQGKKYRIKAKNVVMANYNNMIPYIIPSLPKEQKEALSKNVKTSLLHTK
                     VIISNWEPFIKLGVHEIYSPKMPYARTKLDYPVDMGGYHHPRDPKKPICIHMVCSPLA
                     LANIQGIDLEGLDARDRARVGRNLLFTMSFEEHEKIIRGQLQGMLGTAGFNHEKDILA
                     IVVNRWGHCYSYTENSLYDDPKIAEQTRLIARKPFGNIVIANSDSDWSAYMHSAIDQA
                     YRAINEIKA"
     gene            complement(15455..16990)
                     /locus_tag="RJ239_000554"
     CDS             complement(15455..16990)
                     /locus_tag="RJ239_000554"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HDV7330692.1"
                     /translation="MLQALAIKYRPKTFDELIGQKTVSVSLKYALNHNRLAHAYLFSG
                     LRGSGKTSSARIFSRALVCEQGPSDTPCGTCKHCLAALEGKHIDIIEMDAASNRGLED
                     IQALIEQTKYTPSMARFKIFIIDEVHMLTPQAANALLKTLEEPPSYVKFILATTDPLK
                     LPATVLSRTQHFRFKQIPQSEILNHLKEILLKENVKFEEEALKFIARSGNGSLRDTLT
                     LLDQAIIFCQNEISISKITDMLGFLDPQKIKTFYQAILTKDKEKVFAYLEELQDYEAS
                     SVIDEMLFYLKESFFAKSTEFSTLIYERFFRILSKAKNMLCDDDGFTLCVMAFMMMEA
                     SHLKEIDAQIQEIKQENMTNITPRITPAPIIPNLEKKIEKNAYEILLDSIYDRDFNLA
                     ECFKQSTKFISFENNTLNISSNAQGQNRDTLNKGFKLIQELFKAKFGENAKINVQKAL
                     TIDENKLQSLTQELPNNENKNIDIQSSINMLKEGAKKFDPQEDLKEALKDCFGNPQIQ
                     NID"
     gene            complement(16994..18292)
                     /gene="rho"
                     /locus_tag="RJ239_000555"
     CDS             complement(16994..18292)
                     /gene="rho"
                     /locus_tag="RJ239_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HDV7330693.1"
                     /translation="MEKEKKQHQRTHVPVEGYKIEELKLLDLENLVKIANECEIENPR
                     EFRRQELIFEILKAQTKKGGFILFTGILEISSEGYGFLRGMDSNLSDSVNDAYVSNSQ
                     IKKFALRVGDIVTGQVREPKDQEKYYALLKIEAINYLPLQEAKERPLFDNLTPIFPTE
                     KIKLEYDAMKLTGRVLDLFTPIGKGQRGLIVAPPRTGKTELMKELATAIAKNHPEMHL
                     IVLLVDERPEEVTDMQRCVKGEVFSSTFDLPAYNHVRVAELVIEKAKRMVETGKDVII
                     LLDSITRLARAYNTATPSSGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIVATAL
                     IDTGSRMDDVIFEEFKGTGNSEIVLDRNIADRRIYPAINIIKSGTRKEELLQGVANLQ
                     KIWAIRSAISQMDDVEALKFLYSKMLKTKDNVELLSIMNE"
     gene            18401..20758
                     /locus_tag="RJ239_000556"
     CDS             18401..20758
                     /locus_tag="RJ239_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase
                     metal-binding domain-containing protein"
                     /protein_id="HDV7330694.1"
                     /translation="MIMKCEHCKLDYKQAQMIEYKGKIFCCKGCESVWEILHESGLDE
                     FYEKLGNQTLSPVNFQNEMKNYDEFITKTKEGFSEIYLMIHGIECAACVWLNEKILTK
                     QEGILELDINHLNHKARIVFDEQSISLVQILRLIESIGYKASAYDASKASKKADLLKR
                     EFYSKLVVAIACVMNIMWIAVAKYAGFFSGMDKDTKDILNFAEFILCSPVLFYTGSHF
                     YKSAFKTLKMHSLNMDVLVISGASLAYVYSLWAMFFRVGEVYFDSVAMIICFVFIGKY
                     LEMFSKKRALDTIDGLNDFLQNEVLVFNGKEFVSKEVQKVCLGDRILLKTGDKILIDG
                     ICKSGEMSVDTSSLNGENTPKLIQKEDEIFSACIVLDGSVEYEATKLYKDSKLSQIIQ
                     LLELASSKKAKLESLVNSLLAYFSRTVLLIAFICFAFWFFYKEESFEISLVNAIAVLI
                     IACPCALALATPVSNLVALGRALKKHILFKSSSVIEDLSKCDCVVFDKTGILTKIELE
                     LKEVFLDKALDLNELYNFVKLSKHPISQNIVLYLKQKGAKDLNLDFKKHSSIQAKGLS
                     AELNEGLLLGGSSKFLQEKGIVAKEFDNTHFIFAKEGKILAFFEFDSVLREGAKELIA
                     YLKKEKKELMILSGDHQKAVEKIAKKLEIQNYQASCLPEDKMKTIENLSKNYKVLFVG
                     DGVNDALALKYASVSMTLREGSDLAIESSDVLLLKNDLLSLKKAIKLSKNTFKIIKQN
                     LAFSLFYNACTIPLAFLGMINPLFAAISMSFSSIIVVLNALRIKE"
     gene            20755..20961
                     /gene="ccoS"
                     /locus_tag="RJ239_000557"
     CDS             20755..20961
                     /gene="ccoS"
                     /locus_tag="RJ239_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HDV7330695.1"
                     /translation="MNSIIMMMIGVSILAFFIILATLLWGIKNKQFDDDYKFTTLNDD
                     EDSLRDAIELERRKKEALDKKRLS"
     gene            complement(20984..21286)
                     /locus_tag="RJ239_000558"
     CDS             complement(20984..21286)
                     /locus_tag="RJ239_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HDV7330696.1"
                     /translation="MKKLLVVSALACLGVSAFAADGATLFKKCAVCHGANADKVYLNK
                     VPALKTLSSAERLQYMKEYSEGKRNAYGQGAIMKLNLKGLTEEDFKAIEAHIETLK"
     gene            21368..21928
                     /gene="gmhB"
                     /locus_tag="RJ239_000559"
     CDS             21368..21928
                     /gene="gmhB"
                     /locus_tag="RJ239_000559"
                     /EC_number="3.1.3.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-alpha-D-manno-heptose-1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HDV7330697.1"
                     /translation="MFIFFLKKLYYNVFMKTKALFLDRDGVINIDKKYVYKIEDFEFC
                     DGIFELCRYFLARNYLLFIATNQSGIARGYYKESDFFKLCDYMLKEFAKQDIKIDKIY
                     HCPHLEGCECRKPKAGMLLKAKDEFDLDMKNSIFIGDNLSDMQAGLNADIGTLILVNE
                     EKKEGDFFRQFKNLKEILNFFKEKDI"
     gene            21929..22882
                     /gene="rfaD"
                     /locus_tag="RJ239_000560"
     CDS             21929..22882
                     /gene="rfaD"
                     /locus_tag="RJ239_000560"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HDV7330698.1"
                     /translation="MKIAITGGAGFIGSQLALNLQEKHEILIIDKMRSSATFENGNLQ
                     SFGHFKNLLEFDGELFAGDINDEKVLKKIEDFKPEIIFHQAAISDTTVFDQTKVLQTN
                     LNTFKDFIELSIDLNAKLIYASSASVYGDAKSPQTVGKDEEPKNPYAFSKLMMDKLAK
                     KYYDKAHLVGLRYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSDQIYRDFT
                     YIKDVISANLIALDSKCGVYNVGSGKARTFQDIVDILQKELKTDLPCEYIPNPYVKSY
                     QFHTEAKLDQTWNYQPKFSLEEGIKDYLGEIKRLFEKEVNA"
     gene            22875..24260
                     /gene="rfaE1"
                     /locus_tag="RJ239_000561"
     CDS             22875..24260
                     /gene="rfaE1"
                     /locus_tag="RJ239_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase"
                     /protein_id="HDV7330699.1"
                     /translation="MLEFLSQQKPKILIIGDFMVDNYTWCDCSRISPEAPVLIAKTLK
                     EDKRLGGAANVYANLKSLGADVFALGVVGDDESGKFLQENLKGEFLIQKGRKTPFKNR
                     IMAHNQQVLRLDEEDISEILLENELIALFDEKIKDFKAVVLSDYAKGVLTPKVCKAVI
                     EKAKVLNIPVLVDPKGSDFNKYSGATLLTPNKKEALEALKFENLEGENLEKGIKKLKE
                     DFSLRYSIITLSEAGIALFDEGLKIAPAKALEVYDVTGAGDSVIAVLAFCLANEIEIF
                     KACELANEAAAVVVSKIGSVSVSFDEIKSFKRVDFEKKIKSKEELLVLLKQNNKKIVF
                     TNGCFDIVHFGHIKYLDKAKRLGDVLIVGLNSDASVKRLKGESRPVNSEFQRACMLAA
                     FYFVDFVVIFDEDTPLELISFLKPDILVKGADYKDKLVVGADIVSRVELIDFEEGFST
                     SKIIEKIKDKK"
     gene            24257..24817
                     /gene="gmhA"
                     /locus_tag="RJ239_000562"
     CDS             24257..24817
                     /gene="gmhA"
                     /locus_tag="RJ239_000562"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HDV7330700.1"
                     /translation="MINLVEKEWQEHQKIVQASEILKGQIAKVGELLCECLKKGGKIL
                     ICGNGGSAADAQHFAAELSGRYKKERKALAGIALTTDTSALSAIGNDYGFEFVFSRQV
                     EALGNEKDVLIGISTSGKSPNVLEALKKAKELNMLCLGLSGKGGGMMNKLCDHNLVVP
                     SDDTARIQEMHILIIHTLCQIIDESF"
     gene            complement(24798..25757)
                     /gene="waaF"
                     /locus_tag="RJ239_000563"
     CDS             complement(24798..25757)
                     /gene="waaF"
                     /locus_tag="RJ239_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HDV7330701.1"
                     /translation="MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTAL
                     FKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFAFRSAFSSKIILHILKTKQRYFF
                     DKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
                     SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCN
                     KTTIKTLCQNIAFCDLFITNDSGPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLV
                     HLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL"
     gene            25816..26640
                     /locus_tag="RJ239_000564"
     CDS             25816..26640
                     /locus_tag="RJ239_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDV7330702.1"
                     /translation="MPQLSIIIPLFNSCNFISRALQSCINQTLKDIEILIIDDKSKDN
                     SLNMVLEFAKKDPRIKIFQNEENLGTFASRNLGVLHSSSDFIMFLDSDDFLTLDACKI
                     ALKEMKKGFDLLCFDAFVHRVKTKQFYRFKQDEFFNQKEFLEFLSKQRHFCWSVWAKC
                     FRKDIILKSFEKIKIDERLSYGEDVLFCYVYFMFCEKIAVFKTCIYHYEFNPNGRYEN
                     KNKEILWQNYQDKKKSNELVKKLCLNFKNNDFHKKLFEVLEKEEFDLQRRVDEARN"
     gene            26624..27472
                     /locus_tag="RJ239_000565"
     CDS             26624..27472
                     /locus_tag="RJ239_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330703.1"
                     /translation="MKQEISSFWYTPRGYKGIGLMELLSIKSFIDNGYKFILYTYNLD
                     DKIFKKLDELFDDFELKDANEIVSFKNYFRDDRGSGVAAFSDYFRYNLLYLKKKRGGV
                     WVDLDMICLNYIDLNEEYIFTQEVDEDNKKSRITTSFLKFSRYSDFGKNLIQEAEKII
                     NKRKKISWGVIGPWFLADHVKKCGLENFVWDYKRTCQIPWCNVKIFLDNTSIDISQPF
                     LHLFSEMWRLNNMEKNTFHQMGVYGQLLKKHEIEKLYNQINTCLKTSMLDNIASFLTK
                     FFIKKL"
     gene            complement(27467..28129)
                     /locus_tag="RJ239_000566"
     CDS             complement(27467..28129)
                     /locus_tag="RJ239_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylneuraminate cytidylyltransferase family
                     protein"
                     /protein_id="HDV7330704.1"
                     /translation="MTLAIIPARAGSKGIKNKNLALLHDRPLLYYTINAAKNSKYVDK
                     IVLSSDGDDILEYGQTQGVDVLKRPKELALDDTTSDKVVLHTLSFYKDYENIVLLQPT
                     SPLRTNVHIDEAFLKFKNENSNALISVVECDNKILKAFIDDNGNLKGICDNKYPFMPR
                     QKLPKTYMSNGAIYIVKSNLFLNNPTFLQEKTSCYIMDEKASLDIDTTEDLKRVNNIS
                     FL"
     gene            complement(28160..28994)
                     /locus_tag="RJ239_000567"
                     /pseudo
     CDS             complement(28160..28994)
                     /locus_tag="RJ239_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002852888.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-1,4-N-acetylgalactosaminyltransferase"
BASE COUNT         9772 a         3833 c         5147 g        10242 t
ORIGIN      
        1 ataataaaga attacaagct aatataagcg attttgatga tcttcctgtg gttgaagagc
       61 aagaaaaaga aatggatttt gatgatcttc ctgaggatgc tgaattttta ggtcaagcaa
      121 aatataatga agaatcagag gaaaatttag aggagtttgc tcctgttgtg gaagaagatg
      181 ttcaagatga aatagatgat tttgcttcaa atttgagtac tcaagatcaa atcaaagaag
      241 aactagctca acttgatgag cttgattatg gtattgatag tgaaaatagt agcaaggttt
      301 tagaagattt taaagatgaa ccaattctag acgataaaga attaggaaca aatgaagagg
      361 aagtggttgt gccaaattta aatataagtg attttgatgc attgaaagaa agtgatatac
      421 aagaagctct tggagaggaa atcttagaaa aaaatgaaga gcctatagca agtgatgcaa
      481 ctaaagatga taatagcgaa gagatagtta atgagcttag ccaaagcata gcaggagcga
      541 tcacttcaag tattaaagat gataccttaa aagctgctct taagggtatg aatatgaata
      601 taaatataaa cattagtttt aaagaggatt gaaattgcaa ggttttgttt tgttgatttc
      661 aggtcctagt ggtgctggaa aatcaactct tttaaaaaaa ctttttgatg aatttgaaga
      721 tgagctttat ttttctattt cttcaacaac tcgcaaacca agagagggtg aaaaaaatgg
      781 aatacattat cattttatat cccatgaaga atttcaaaaa ggtatagata gtgatcattt
      841 tctagaatgg gctagagtgc atgaaaattt ttatggtact tctttaaagc acactcaaaa
      901 tgctttagat aatggaaaaa tagttgtttt tgatattgat gtgcaaggat ttaaaatagc
      961 cagaaaaaaa atggctgata agattgtttc tgtttttatt actacaaaaa ataaagatga
     1021 gttaaaaaaa agacttatta agcgaaatac tgatacaata atacaactag aaaaaagatt
     1081 acaaaacgct agtgatgaaa tgaaagagct tagtgagtat gattatctta tcattaacga
     1141 tgagttaaag caaagttatg aagcattgcg agcgatttta atcgcccata aatttagaac
     1201 caaagggcag aatctagggc aaattcagaa tatttggaat gaaggagaat aaaatgggtg
     1261 gttggtcaag tccaagtcat tggttgatta ttttattgat tgttgtattg ctttttggag
     1321 caaaaaaaat tccagaactt gcaaagggtt taggcaaagg tattaaaact tttaaagatg
     1381 aaatgaataa tgatgatgaa gtagcaaaaa atactcaaaa aatagaagaa aacaaaaaca
     1441 caactaataa tacaaatgct gatgcaagta tagacgaaac aaaaaaagct taaggtttag
     1501 tcttttgaaa agtattattt ttaatgaaat taaaaagatt ttagagtgtg attttgcgct
     1561 tgaaaatcca aaggataaaa atttagcgca ttttgctacc cctttggctt tttcactggc
     1621 taaggaatta aaaaaatccc ctatgttgat cgctagcgac ttagcgagca aatttcaaaa
     1681 tcatgattgt tttgaatcag ttgaagctgt aaatgggtat ttaaatttta gaatttccaa
     1741 aactttttta aatgaacttg caaatcaggc tttaacaaat ccaaatgatt ttactaaagg
     1801 agaaaaaaaa caagaaagtt ttttgcttga atatgtgagt gcaaatccta ctgggccttt
     1861 acacatagga catgcaagag gcgctgtttt tggagacacc ttaacaagac ttgcaagaca
     1921 tttgggctat aaattcgata cagaatacta tgtcaatgat gcgggtaatc aaatttattt
     1981 actagggctt tctattttac taagtgtgaa agaaaataca cttcatgaaa atgttgaata
     2041 tccagagcaa tattacaaag gcgagtatat agcggattta gcaaaagaag cttttgaaaa
     2101 atttggtaaa gaatttttta gcgaagaaaa tatccctagt ttggctgatt gggcaaaaga
     2161 taaaatgctt gttttgatta aacaaaattt agaacaagca aagattaaaa ttgacaacta
     2221 tgtaagcgaa agatcgtatt atgatgcttt aaatacaact ttagaatctt taaaagagca
     2281 taagggaatt tatgagcaag aaggtaaaat ttggcttgct tcttcgcaaa aaggcgatga
     2341 aaaagatcgt gtaattatcc gtgaagatgg acgcgggact tatttggcag cagatattgt
     2401 ttatcataag gataaaatga gtcgtggtta tggaaagtgt attaatatct ggggagcaga
     2461 tcatcatggt tatatcccta gaatgaaagc tgcgatggag tttttgggat ttgactctaa
     2521 taatcttgag attattttag cacaaatggt ttccctgctt aaagatggag agccttataa
     2581 aatgagcaaa agagcaggaa attttatctt gatgagcgat gtagttgatg aaataggaag
     2641 tgatgctttg cgttatatct ttttgagtaa aaaatgcgat actcatttgg aatttgatat
     2701 tagtgatttg caaaaagaag atagctctaa tcctgtatat tatatcaact atgcacacgc
     2761 tagaattcat caagtgtttg ctaaagctgg taaaaaaatc gatgatgtaa tgaaagctga
     2821 cttacaaagt ttaaatcaag atggtgtaaa tttgcttttt gaagctttga atttaaaggc
     2881 tattttaaac gatgcttttg aggctagagc tttgcaaaaa attcctgatt atcttaaaaa
     2941 tttagctgca aattttcata aattctacaa tgaaaataaa gttgtaggct ctgcaaatga
     3001 aaatgatttg cttaaattat tttctttggt tgctcttagt attaaaaccg cattttcttt
     3061 aatgggtatt gaagcgaaaa acaaaatgga acattaaaac agcattttgc tgttttaata
     3121 atttagcaaa aatactgcta ttattacgat aatgatacct aaaattccta ttttgtttaa
     3181 tttttcttta tataaaatcc atccaccaag acaagttcct atgatgccta tagcacccca
     3241 agttgagtaa gctatgctta aaggaacata ttttaaagaa aaagaaagta ggaaaaaagc
     3301 aagtatagca ttggcaatcg cagctaagcc ccaaatttta tgcttaaaac catctgattt
     3361 ttttagcaat aaatttgcta cgatatctaa caatgctgat aaaataatga taaaaatata
     3421 cattattctt taacctcgcc tatattaatc atgataattc caatgataga aagaataatg
     3481 cctagaattt gagttaaggt taaactctct ttaaaaacta taaaagaaac taaaagtata
     3541 agaataatcc ctaaaagctc ccatacagca taggctatgc ctacttgaat ttttttaatc
     3601 gccttgccca taaaaaaata agaaaaagct ataaataaag ccataaatat atagcctaaa
     3661 atttgatttt ccatttttaa aaaactagtg cctaaaactt caaatacaat agcagcaatc
     3721 aagaaaaacc aagcaacaaa aagttctttt tttgcgatat tcaaaaagct tctccccaaa
     3781 aataaatggt aaaatcatac catttaaagc tttaattagc ctttttagtt tatactttta
     3841 agtttaaaaa tctttaaaga aagtgagaat ttatgggacg agcgtttgaa taccgaagag
     3901 cttctaaaga ggctagatgg gataaaatga gtaagctttt tcctaagctt gctaaagcca
     3961 tacaagtagc cgctaaagaa ggtggcaccg atcctgatat gaatccaaaa ttaagaagtg
     4021 ctatagctac agcaaaagca aataatatgc caaaagataa tatagatgcg gctattaagc
     4081 gtgcgagcgg aaaagatagc gcagatatta aaaacattca ttatgaagga aaagctgcac
     4141 atggagcttt ggttatagtt gaatgtatga gcgataaccc tacacgcacc gtggctaatg
     4201 taaaagctat ttttagcaaa aatggtggag aagttttaca aaatggatct ttaggcttta
     4261 tgtttactag aaaagcggtt tttcatcttg aaaaatttgc aggagattta gaagaattag
     4321 aacttgattt gattgatgca ggacttgaag aattagaaca aaatgaagaa gagttagtaa
     4381 ttagcggtga ttatactgcc tttggtgagc taagttctgc tatagaagct aagggtttag
     4441 ttcttaaaaa agcagggctt gagtatatac caaacaatcc tgtaagcttt agcgaagaac
     4501 agcttagcga tatagaaaaa cttttagata agttagaaga cgatgatgat gttcaagctg
     4561 tttatacaaa tatagattaa ggagaaataa tgataaagac aattgacaca agcaaagtaa
     4621 acgaatacaa atttgctctt atagaaactg aaaaaggcac aatgaaacta aaactttttg
     4681 gcgatgaggc tccacaaacg gtttgtaatt ttgctacttt ggctaatgaa gggttttata
     4741 aagatttaaa tttccatcgt gtgatcccaa attttgtcat acaaggaggt tgtccacacg
     4801 gcaatggtat aggtgggcct ggatatgaaa tcatttgcga atgtgatgat caagaacata
     4861 aacatgagcg tggaacctta tctatggcac acgcaggacg cgatacgggt ggctctcaat
     4921 tttttatttg tcacagccct caagctcatt tagatggggt tcatactgtt tttggacaaa
     4981 ttgatccaaa agatgaagaa agtttggaag ttttagactc tatacgccaa ggagataaaa
     5041 ttttagacat caaaatttgc gataaaattt aaaaatttaa aattttaaaa cttttttgaa
     5101 actacaatat ttacaaagct agtcataagt ttgactagct aaaaatgatt aatgtataat
     5161 ttttttttaa actttttttt ctataatcac aattttaatt tactaaatgt aacaaaatta
     5221 caaggagtta tgattatgaa aactaagttt tcacttattt taagcgcttg tcttctttca
     5281 tcttcacttt ttgctaaaaa tacagatgat gagataacca agcttcaaaa acagcttgca
     5341 caaattcaag ctgaacttgc agaaatcaga aaagaaaggg aagctcaagc taagcaaaat
     5401 gaagctgtaa aagctgaact tgccgatctt aatgatagag ccgatgaaac agaatttcaa
     5461 gctgctttaa gtaaggttaa atttggtctt gagttttcaa cagcagtttc aaatacaaac
     5521 tataaagtta gcggacaaga ttatagcgct aataacaaat ggatgaatga gcttcattta
     5581 aatatgaatg ctgatattaa tgataaaacc aaattctatg gtcgtttatc tatggctaaa
     5641 aactggtctc aaatgggttg gagtggaagt ccacttgact tagatgcagg aagaaataca
     5701 agatcaagcg ggcctgtact ttatgtagat agagcttatc ttgactacta tatcacacct
     5761 gagtggattg caaccatagg aagacagcca ggaaccgatg gtccaggaag caaccttaga
     5821 aacaatgctt taagacaatc aacttatcca gctttagcaa tcaatgcttt aggtgatgca
     5881 gcagtgatca cttataaacc tgaaagtttg caagatcata aggtagctat ccgtgcagct
     5941 tatggtaaaa cttatcaatg ggatgaagaa agtggtaaag taagagactg gatgagtgat
     6001 caaaaagatg ctgatgcaaa tctttactat gctgcagtag aaggagagct tcctatagaa
     6061 ggtatgggag ataatcttat tatcttcaat gtggctcata tgactgattt tgcattgcct
     6121 attccaggat ctatgttatt gggtgatgat gatgaagttg ttaatttagg taatcttact
     6181 ttagctaata ttcattttga aaattacaaa gcttttggaa caaattttaa ttggttcgca
     6241 tctttgggat attctaatgg aagcaataat gagataaatc cattattaag catagctctt
     6301 caaagtaaag gttatggcaa tggtaagttc aatgaaaaag acggctatgc tgtgcatgta
     6361 ggcggacgct atgattttac taaggcttta aaagtagggt atgagttctt ctggggaagt
     6421 agatactggt atactatgag ccgtccaagt atcaatgatc cgcttaatat aagaatgaca
     6481 agaggaacgg cacatgattt ttatgtgatt tatcaacttg atagatatca attcttacgc
     6541 ttaagctaca ccaatatcca aaacatttgg ggtaatcgtg gcttaccatt tggtggagcg
     6601 aaaaaagata aagcaagagc tgataatatc atgttaatgt ataatgtaaa attctaagga
     6661 gcaaaagatg agaaaaatac tttttgcaag tttattacct atcattgctt tggctgattg
     6721 tgcaagtttg atggcaaaat acgaagctcc agagccagag tcaaaaacaa tgaaacaagt
     6781 tgaacgctgg attaataaaa aagttagcga tccagctgat gctgctgttt taaaagagtg
     6841 catgatcgct cgtgcagcag acaatccaaa tcaagtttca gttgcaggta aataaaaaaa
     6901 gcggtgtaaa accgcttttt actgtttaat cttttaagct acaatttttt aaaattttct
     6961 tcaaataagg ctaatatgca agaaatcatt tcttttattg ttgagacggc tagtgcttgg
     7021 gggtatttgg gtattattat cttaatgacc ttagagagtt gttttatacc ttttccaagt
     7081 gaagttgtta tgatacctgc tggatatttg gcacataaag gcgagcttga tatcactctt
     7141 tgtatactta gtgggacttt aggttctgtt ttaggggctt tgattaatta ttatatttgc
     7201 tttttttggg gtaaaaattt tgtattaaaa tggggtaagt attttggtat aaacgaagtc
     7261 aaatttgcta aatttgaaga attttttaac aaacatgggg aattttcaac ctttacttgt
     7321 cgtcttttgc cagggattcg tcagtacatc tctatgcctg caggtttggt aaaaatgaaa
     7381 cttataaatt ttatactttt tactgcactt ggtagtgcta tttgggtggc tatacttgta
     7441 tttttgggtt attatatagg acaaaatgaa gagttgatta aaacttattt aactcaaatt
     7501 ttaatcatta taattgtttt tgtgatttta gcaagtttaa tttatatcaa aatcaaaaag
     7561 ccttttaaaa aggcttaaat ttttatcttt tacgctttgt atagcgtttt tgatttgttg
     7621 ttttgaattt tctaattttg ttttttcttt ttcattgaat tttaattcaa aaaccttttc
     7681 tataccatct tttcctatga tagcgggcat tgaaaaagct atatcatcaa aaaccacact
     7741 tacaggatgt aaactttttc tatcttctag gatggctttg gctaaatttg cacaagaagt
     7801 tcctatgcca aattctgttc ttcctttgcg ttcatagatg aaatatccct cgctaatcac
     7861 agctttttcg agttcttgta tgtctaaatc tttgcctaat ttttgcttgt aaaaatctaa
     7921 taaattttgt cctaaaacgc ttgcattaga aagtgctgca aactgagaat ctccatgttc
     7981 accaatcata caagcaaaaa tatcttttga atttatgttt aaatctttgg ctaaaaattt
     8041 cttaagtctt gaactatcta aatttgttcc actaccaaaa acatgatttt taggtaattg
     8101 gcttaatact tgagtgtagt aagttatggt gtcatttgga tttgttgcga caatgtattt
     8161 gcctttaaaa ttagcatttt ttaaggttaa gacaatgtct ttaagttcga ggatattgtt
     8221 ttgaagttct actaagcgac taggtaattc ttttaagctt tcttttctaa aagctaaaat
     8281 gataatatcg caagaagcta aattttctaa atttggcaca tgaaaaattt ttgtataaga
     8341 aaaatgaatg gctgacatat cttccaaatc tcttgcatga gctagagcta aatcttgttt
     8401 tatatcatat aaataaagtt ctgagcaaat tccttgagta gctatgctat aagcactagc
     8461 agatcctaca taacctaaac caactatacc gatttttgcc attttttctc cttatttatt
     8521 ttaaaatttg ctataattat aacaaattca atcaaagatt attaaaatat ggaaaaacct
     8581 gatatacaaa gattaactaa ttttttaatc gtatatacta aaactttgct aggtgctgga
     8641 acttatacag ctagggtggc aaaatgcgta ggaagaatag ctgaggttta tggctatgag
     8701 ataaatatca atttcttttt tcatcatatt actttaaatg ttgtagatat ggatgataac
     8761 tccattcaaa gaacttatgt tatacccaat catcatgccc atgttaattt taaacttatt
     8821 tttgatttaa gtgctttaag ctgggctata tatgatcaca aatacgatct tgaaaaagca
     8881 aaagtcgttt ttgggcaaat ttctcaacaa aaaaagcatt cttatttgct taatctttta
     8941 tttgtttcta tggcaaattc ggctttttgc aggctttttg gtggtgattt tggtgctgga
     9001 aatttagtat tttttgcaac ttttgtggga ttgttattaa gatatatttt aactaaagca
     9061 aagattgatt taagaattca atacatcctt tgttctttta tctcatcatg gtttgtattt
     9121 tttggactgg atatgggata taccaatact tctgatgtgg ctttgggttc tagtatcttg
     9181 tatcttatac caggggtatt ttttataaat tctgtgattg atatattaaa agatcatatt
     9241 ttaatggggc ttagccgtat tatcagcgtg gctattttga tttgttgtat agcacttgga
     9301 atttacatga cgcttagtat ttcggatttt gggattttaa gatgattgaa tttattttaa
     9361 gagatatgtt ttttgctgct gtggcgggat ttggctttgc ttatgcttgt aatccacctt
     9421 taaaaaccct tattttatct gctcttttag cggcaattgc acatggactt cgttttacct
     9481 tggtggaata ttttcatttt caaactttag caattgcaac ttttgttgct tcattttgca
     9541 taggatgttt aggaattgtt ttagcaaaaa tcatcaaaac tcctgctgaa attatcgctt
     9601 tccctgctct tattcctatg atacctggaa tttatgctta taaagcgatt ttgtatctta
     9661 tttcttttat acgcagtgat gatttgaagg ctaagtctga atttttagtt caattttttg
     9721 attatttttt tacaactgtt tctgtgactt tggctctagc tataggagtg agtgttacct
     9781 tgcttatatt ttttgaacaa agttttatga tgactagaca tgcaaaaaaa cattaaaact
     9841 tgttgtaaat ttgtttaata tttcttttta taattttaag tcaaaaattt aaaaaaaggt
     9901 attgtatgtt atgtccagtt tgtaatgtag atttggttat gagtgatagg agtggagttg
     9961 agattgatta ttgtccaaag tgtcgtggcg tttggcttga tcgtggagag cttgacaaaa
    10021 tcatagaacg cagtgtccct aatacagcaa attttaacca agctccaaga caagagtcaa
    10081 gatataatga ctcagcttat catcagcaca atgactatta taaaaagaaa aagaaagaaa
    10141 gttggctagg cgagcttttt gacttttaat ttttataaaa ataacaaata tttatatcct
    10201 ttttagctta atatcttaaa atgtcaagca aaaaaggata taagatgtat aaatttttat
    10261 cacacgagcc tttagctaac aaatcttgtc atcataatca cgaagaacat tctcatgaac
    10321 atcatcattc ccatgccgat gcaaggagtg tggataaaaa gattttaaaa atttctcttt
    10381 taatgacttt ttctatgatg cttgtgcaat ttatttattc aatcctttca aattctttgg
    10441 cacttttaag cgatactttg catatgtttt ctgatgtttt tgccttagct cttagttttt
    10501 tagccattat agctgtagaa aaatggcaag atcatcaaaa gacctttggg tattttcgtc
    10561 ttgaagtttt agtggctttt atcaatgctt taaccattat tttatcggct ttatttatca
    10621 tttatgaggc tatagaaaaa tttatcaatc caaaagaaat tgacgctaaa accatgataa
    10681 ttgtagctat tttgggcttt ttggtaaatg ggattaatgc tttgatgatg tttaagggtg
    10741 caaatttaga aaatgtcaat atgaagtccg cttttttgca tatgatgagc gatttattgg
    10801 gttctttagc ggttattata ggtgggattg tggtgtattt tagtgatatt gtttatatag
    10861 atacgatttt agctattgta ttatcaatct tgcttttaag atgggcgatt atcttgctta
    10921 aacaaagtgc taatgtcttg cttgaaagtt ctcctgtgga tatagaaaaa gtaagacaag
    10981 ttttgctttt aaatcctagt gtggatgagg tagtggattt gcatattact caaatcacta
    11041 ataaaatgct agtagcctct atgcatttaa aagtaagagt ttgcaatcta aaggaatttg
    11101 aaaaactatc tcaggattta tctcataagt tgttgcatga atttgaaatc gggcatatta
    11161 ccatacaacc tataaggagt gaaaatgaaa tttaaagtaa aaaatgttaa ttgcatgaat
    11221 tgtgtaaatt tgatcaaaaa ttctcttgaa gatgaatttg gaaatataga agtggatttg
    11281 gagcaaaaaa ttttaagttt aaatttagaa gaaaatcaag tatcaaattt tacaaaagaa
    11341 tttcaagatt taggttttga gattgtagag cgtttataat ggaagaattg cgtataaaaa
    11401 taggcaaaat gacttgcgtt aattgttcta atgctataga aagagcttgt aaaaaaattg
    11461 atggtgttaa agatgctagt gtttcttatg tgaattctag cggggttttt ttacttgaag
    11521 atcaaaaaaa acgcaaggat atcatcgcaa aaattaaaaa tttaggcttt gaaattttag
    11581 aagatgaaca aagcttgaac gcatacaagg caaaaaaaca cttagaatta agaaaaaatt
    11641 tgctcttaag tatagttttg agtgtgatta ttatgtattt tgaaatgttt gttaaaagtt
    11701 ctttttctca aaatatccaa atggctttga gtttttttgg gatattttat tgtgggagag
    11761 actttttttc tcatgctttt ttaggcttta aaagcaaaaa tttagatatg aatacccttg
    11821 tagctttggg gactttgagt gcttttgtgt attctttttt ggtgtatttg caaattttta
    11881 aagaagaaga tttgtatttt agtggtgcaa tgatgattat ttcctttgtg cttttaggaa
    11941 aatatcttga aagtaaggct aaatttaagg cacaagatta tcaaagaatt ttagaaaata
    12001 tagacacaaa aaagacaaaa attttgcttg aagatgaaag tatcaaagaa atttcaagtt
    12061 cttttgttaa aagtggcgat gtacttttgg taaaagaagg agaaagcatt gttgcagatg
    12121 gagtagtgct tttagggagt gcagagcttg atatgagttt tttaaatggg gagtttttgc
    12181 ctgttttaaa aaaagaaggc gatgaagttc aagcaggagc agtagtttta aatggtgctt
    12241 taaggatcaa agcaaacaaa aaggccatgg atagtacttt agaacaaatc aaaaatctag
    12301 tttttgaagc aggaagtatc aaaagtcctt tggcaaattt agcagatcaa atttctaaat
    12361 actttgtagg gggtataata ttttttgctt ttttagtttt tgttttttgg gtgctaaaag
    12421 cagatttaaa tacagctttt ttacactctt gtgctgtgct tttgatctct tgtccttgtg
    12481 ctttaggtct tgcaacgcct atagctttgg ttgtggcaag tgcaaatgcg gcaaaaaatt
    12541 tcattcttat taaaaatcct gctgctttag aaaaattagc cttagttaag tatgcttttt
    12601 ttgataaaac gggtacatta acaaaggaaa atttgagtat ttttaaacac aatctttcta
    12661 aagatgattt tgataaatta tgtcaaattg aaagtttaag ctctcatcct atagctaagg
    12721 ctttacataa agatcatttt tttgatttaa agggtgaggg aagagtgatt gtgggttctg
    12781 gtataaaata caaagaagat aatgatattt atctcgcagg tagtgcgaag tttttgcacg
    12841 aaaatgaaat tgacacaaaa gaaagtgata tcttttttga tacttttaaa gaatatatta
    12901 gggtgtattt tgctaagaat aaaaagtgtt taggcggtgt tttgttaagc aatgctttaa
    12961 aagatggagc caaagagctt gtgttaaatt taaaaaagca aaatcttaaa acttttattt
    13021 taagcggcga tcatgtaaaa aatgtagaaa aaatagccaa agaattacaa atagacgaat
    13081 ttcacgctca gcttaagagt gaagaaaaac tacaaatcat tcaaaaattt gaaaaaactc
    13141 tttttgtagg agatgggatc aatgatgcgg cagctttatc tgctgcaagt gtgagtataa
    13201 gtttttcaaa ggcaaatgaa cttgcaaaaa aaacagggga ttttatcttg ataaaagatg
    13261 atttatcagc tatttttaaa tgctttaagc ttgctaaaaa aacacgcagt attattaagc
    13321 taaatctttt ttgggctttt atttataatg tactttgcat tcccatcgca gcaggatttg
    13381 taccttttat cgctttaagt cctcatatag cagcacttgc aatgtgtttt agttctgtta
    13441 ctgtagtgtt taattcttta aggcttagaa aatctaagcc ttgatctcat taatagcgcg
    13501 ataagcttgg tcgatagctg aatgcatata agctgaccaa tctgaatctg aattagctat
    13561 aacaatattg ccaaaaggtt ttctagctat aagcctggtt tgctctgcaa ttttaggatc
    13621 atcataaaga ctattttctg tataggagta acaatgtccc cagcgattta caacaattgc
    13681 taatatatct ttttcgtggt taaaacctgc agttcccaac attccttgaa gctgccccct
    13741 aatgattttt tcatgttctt caaaactcat ggtaaacaat agatttctac ctactctggc
    13801 tctatctctt gcatcaagcc cttcaagatc aataccttga atattggcta gagctaaagg
    13861 agagcaaacc atatgaatac atataggttt ttttggatct cttggatgat gatagccacc
    13921 catatcaacc ggataatcaa gttttgttct agcgtaaggc atttttggtg aataaatttc
    13981 atgaacccct agtttaataa atggttccca attgcttata attactttgg tgtgaagtag
    14041 agatgttttt acatttttac ttaaggcttc tttttgttct ttaggtaaac tagggataat
    14101 ataaggaatc atattgttat aattagccat tacaacattt tttgctttaa ttctatattt
    14161 ttttccttga ttgatatagc ttattaaggt tccatttttt gtattttcta catgaataac
    14221 agtactattt aatcgtaaac gaactttatt attagagtca tcaagttttg agtagtcaaa
    14281 atgagctaag gtgatatcgt ccatatcttt acctttttgt gacactgtag gaatcagctt
    14341 tcttaccatt aatcttgcta ctgtagcatt tccatcggcg caatgataaa tgtaaggttc
    14401 ttccatttcg gccaaagctt ctccttcgat aggatcaagt cctaatttat caaacccagg
    14461 taaaaaagaa attcttgcat cctcacaaga gattgcatct atacctaaag ctaaaaaatc
    14521 atccgtcatt ccctcgaaaa atgttatagc tttttgggat aattttactt tttcttctaa
    14581 gaatttttta taacttgttt tagccatata ttcttctttt tcctctttgc ttaaaccttt
    14641 gagatagtct ttattgcttt taaaaaggga tattaactct cttttatctt tagaagtcat
    14701 aggaaaatct ttaataaaat tttcaatact ttttccatta tttttagaat ctgggatatc
    14761 atcacaaata acttttctag gatttccatt gacaacttta tcaacaccaa aattttcttt
    14821 tgaaaaatat acccctctgc ttaattttaa atctgggtaa aaatttacat caaatcgttt
    14881 tgctaattca tctatactga ctccaagtga ttttaagagt tcgattactt ctttagaata
    14941 aagtgctttt ggggattgaa aactttcact tcctccgtaa cttaaaatgg ttccttcatc
    15001 aagttgtatt tcattgcgtc tagcatgtcc tccaaaatca tcatgattgt caagaattaa
    15061 aattttttta ttttccccaa atttttgttg ataaaaacaa gctgcagcta gtccactgat
    15121 tccagctcca acgattacta aatcataatt ttctttaggt tttatactgc taaaaccaaa
    15181 tttatctcca tctcttaaca tgtgagcgta tttatagctt ttattattac tacctcttaa
    15241 tccaagtaga ttgggaggat agtattcttt tgtaaagtct tcaattttac tatcttttcc
    15301 atagagtaat tgtaagggtg tcatgcctgc aacgacagct aaggccatgc cattaagaaa
    15361 gtctcttctt tgcattttta ttcttctttc taaataattt ataaaaaaat attgtagcta
    15421 aagattactt atattattat tattaagcaa tatcttaatc tatattttgg atttgaggat
    15481 tgccaaagca atctttaaga gcctctttaa gatcttcttg tgggtcaaat tttttggccc
    15541 cttctttaag catattaata gaactttgaa tatctatgtt tttattttca ttgtttggta
    15601 attcttgagt taaggattga agcttatttt catcaattgt tagtgctttt tgcacattaa
    15661 tttttgcatt ttccccaaat ttagctttaa aaagttcttg tatgagttta aaacctttat
    15721 tgagtgtatc gcgattttgt ccttgtgcgt ttgagcttat atttaaagta ttgttttcaa
    15781 aactaataaa ttttgtgctt tgtttaaagc attctgcaag attaaaatcc ctatcataaa
    15841 tactatcaag caagatttca taagcatttt tttctatttt tttctcaaga ttaggtatga
    15901 taggagcagg tgtgatccta ggtgtaatat ttgtcatatt ttcttgtttg atttcttgga
    15961 tttgtgcgtc aatttctttt aaatgacttg cttccatcat cataaaagcc ataacacaaa
    16021 gcgtaaagcc atcatcatcg caaagcatat tcttagcttt tgataaaata cggaaaaatc
    16081 tttcataaat taaagtagaa aattctgtac tttttgcaaa aaaactttct tttaaataaa
    16141 aaagcatttc atcaatcacg cttgaggctt catagtcttg taattcctct aaatacgcaa
    16201 aaactttttc cttgtctttt gttaagatag cctgataaaa ggttttgatt ttttgaggat
    16261 ctaaaaagcc taacatatct gtaattttac taatgctgat ttcattttga caaaaaataa
    16321 tagcttggtc aagcaaggtt aaagtatctc ttaaagatcc attgccgctt cttgctataa
    16381 attttaaagc ttcttcttca aatttaacat tttctttaag taaaatttct ttaagatgat
    16441 ttaaaatttc actctgtgga atttgtttaa agcgaaaatg ttgtgttctt gaaagcacag
    16501 tagctggaag ttttaaagga tctgtggttg caagtataaa tttaacataa cttgggggtt
    16561 cttctaaggt ttttaaaagc gcatttgcag cctgtggggt aagcatatgt acttcatcaa
    16621 tgatgaaaat tttaaatctt gccatagaag gggtgtattt ggtttgttcg attaaggctt
    16681 gtatatcttc aagcccacgg ttgcttgcag catccatttc tataatgtct atatgtttgc
    16741 cttcaagtgc tgcaagacag tgtttgcaag tgccacatgg agtatcactt ggtccttgtt
    16801 cgcaaactaa agcacgagaa aaaattctag cacttgaagt ttttccactt cctctaagtc
    16861 ctgaaaaaag ataagcatga gctaagcgat tatgatttag ggcgtatttt aaacttacgc
    16921 taactgtctt ttgtcctata agttcatcaa aagtttttgg tctgtattta atcgctaaag
    16981 cttgaagcat tttttactcg ttcattatag ataaaagttc tacattgtct ttggttttaa
    17041 gcattttaga atataaaaat ttcaacgctt caacatcatc catttgagaa atcgctgaac
    17101 ggatcgccca aattttttga agatttgcta cgccttggag taattcttct tttcttgttc
    17161 ctgatttgat gatattaatc gcaggataaa ttcttctatc ggcgatattt ctatcaagaa
    17221 ctatttcgct atttcctgtg cctttaaatt cttcaaaaat cacatcatcc attcttgaac
    17281 ctgtatcaat taaagctgta gcaactatag ttaaagagcc tccattttct atatttctag
    17341 ctgcaccaaa gaagcgtttt ggtttgtgta gggcattagc atccaccccg ccgcttagga
    17401 cttttccgct gcttggagtt gcggtgttat aagcacgtgc cagtcttgtg atactatcaa
    17461 gcaagatgat aacatctttg cctgtttcta ccattctttt ggctttttct atcacgagtt
    17521 cagctacacg cacatgatta taagcaggta aatcaaaagt agaactaaaa acttcgcctt
    17581 ttacacatct ttgcatatcg gtaacttctt caggcctttc atcgactaaa agtacgatta
    17641 aatgcatttc tgggtggttt tttgcaatag cagtagcaag ttctttcata agctctgttt
    17701 tacctgtgcg tggtggagca acgataagcc cgcgttgtcc ttttcctata ggagtaaaaa
    17761 gatccaaaac acgacctgta agcttcatcg catcgtattc gagtttgatt ttttctgttg
    17821 gaaaaatagg ggttaagtta tcaaacaaag gtctttcttt ggcttcttgt aaaggcagat
    17881 aattgatcgc ttcgattttt aaaagagcgt agtatttttc ttgatctttt ggttctctaa
    17941 cttgtcctgt aacgatatcg cctacacgca gagcaaattt tttaatttgt gagtttgaaa
    18001 cataagcgtc attaacgcta tcactaagat tagagtccat acctcttaaa aagccataac
    18061 cttcggaaga aatttctaaa atccctgtaa aaagtataaa accgcctttt tttgtttgtg
    18121 cttttaaaat ttcaaaaata agttcttggc ggcgaaattc tcttgggttt tcgatttcac
    18181 attcattagc gattttaact agattttcta aatctaataa ttttaattct tcgattttat
    18241 aaccttccac tggaacgtgg gttctttgat gttgtttttt ttctttttcc ataagtcctc
    18301 gtaagattta gcagaataat ttttgtaaaa tgtgatttta ataaaaaaat gcactttttg
    18361 tcaaatttgt ttataattat aaaaaatatt tttttaaaga atgattatga aatgtgaaca
    18421 ttgcaaactt gattataaac aagcccaaat gatagagtat aagggtaaaa ttttttgttg
    18481 taaaggttgt gagagcgttt gggaaatttt gcatgaaagt ggattagatg agttttatga
    18541 aaagcttgga aatcaaactt taagccctgt aaattttcaa aatgaaatga aaaattatga
    18601 tgagtttatc actaaaacca aagaaggatt tagtgaaatt tatctcatga tacacggtat
    18661 agaatgtgca gcttgtgtgt ggcttaatga gaaaatttta accaaacaag aaggaatttt
    18721 agaacttgat attaatcatt taaaccataa agcacgcatt gtttttgatg agcaaagcat
    18781 ttctttggtg caaattttaa gacttattga aagcataggc tataaagcga gtgcttatga
    18841 tgcgagcaag gcttcaaaaa aagcggattt actaaaaagg gaattttatt ctaagcttgt
    18901 tgtggctata gcttgtgtga tgaatatcat gtggatagca gtggcaaaat acgcaggatt
    18961 ttttagcggt atggataagg acactaagga tattttaaat tttgctgaat ttatcctttg
    19021 ttctcctgtg cttttttata cgggatctca tttttataaa agtgctttta aaactttaaa
    19081 aatgcatagt ttaaatatgg atgtattggt gattagcgga gcgagtttgg cttatgttta
    19141 ttctttatgg gccatgtttt ttagggtagg ggaggtgtat tttgactctg tggcgatgat
    19201 aatttgcttt gtttttatag gtaaatatct tgagatgttt agcaaaaagc gtgctttaga
    19261 tactatagat gggcttaatg attttttgca aaatgaagtt ttagttttca atggtaaaga
    19321 atttgtctct aaagaagtgc aaaaggtttg tttgggggat agaattttgc ttaaaactgg
    19381 agataaaatt ttaatcgatg ggatttgtaa aagtggtgaa atgagcgtag atacttcttc
    19441 tttaaatgga gaaaataccc caaaactcat acaaaaagaa gatgaaattt tttcagcttg
    19501 tatagtgctt gatggaagtg tggagtatga agcaacaaag ctttacaagg attcaaaact
    19561 cagtcaaatt atccagcttt tagaacttgc aagttctaaa aaagcaaaac ttgaaagttt
    19621 ggtcaatagt cttttggctt atttttctag aacggtttta ttgatcgctt ttatttgttt
    19681 tgctttttgg tttttttata aagaagagag tttcgaaatt tctttagtca atgcgattgc
    19741 agttttgatt atcgcttgtc cttgtgcttt ggctttagca acgccagtga gcaatcttgt
    19801 ggctttaggt agggctttaa aaaagcatat tttatttaaa agttctagcg tgatagaaga
    19861 tttaagcaaa tgtgattgtg tggtgtttga taaaacgggt attttaacca aaatagagct
    19921 tgaacttaaa gaggtttttt tagataaagc gcttgattta aacgagcttt ataattttgt
    19981 aaaactttct aaacatccta tctctcaaaa tattgtgtta tatttaaagc aaaaaggagc
    20041 taaggattta aatttggatt ttaaaaagca ttcgagtatt caagctaaag gtttaagtgc
    20101 tgagttaaat gaagggttgc ttttaggcgg aagttctaaa tttttgcaag aaaagggtat
    20161 tgtggctaaa gaatttgata atacgcattt tatttttgcc aaggaaggta aaattttagc
    20221 tttttttgag tttgatagtg ttttaagaga aggtgcaaaa gagcttatcg cttatcttaa
    20281 aaaagaaaag aaagaattaa tgatactcag tggcgatcat caaaaagcag tggaaaaaat
    20341 cgctaaaaag ttagaaattc aaaattatca agcttcttgt ttgcctgaag ataagatgaa
    20401 aactatagaa aatttaagta aaaattacaa agttttattt gtaggtgatg gggtaaatga
    20461 tgcactagct ttaaaatacg caagtgtttc aatgacttta agagaaggaa gtgatctagc
    20521 tatagaaagt agtgatgttt tgcttttgaa aaatgacttg ctttctttaa aaaaagccat
    20581 caaattatct aaaaacacct ttaaaattat caagcaaaat cttgcttttt ctttgtttta
    20641 taatgcttgc accatacctt tggctttttt gggtatgata aatcctttat ttgctgctat
    20701 ttctatgtct tttagtagta taatagtcgt tttaaatgct ttaaggatta aagaatgaat
    20761 agtataatca tgatgatgat aggagtttct atcttagcgt tttttatcat tttggcaact
    20821 ttgctttggg ggattaaaaa taagcaattt gatgatgatt ataaatttac tactttaaat
    20881 gatgatgagg attctttacg tgatgctata gaattagaaa gacgtaaaaa agaagctttg
    20941 gataaaaaaa ggctttctta aaaagaaaag ccttttttag aaattatttt aaagtttcaa
    21001 tatgagcttc gatagcttta aaatcttctt cagttaaacc tttaaggtta agtttcatga
    21061 tcgcaccttg accataagca tttcttttac cttctgaata ttctttcatg tattgaagtc
    21121 tttcagcaga agaaagagtt tttaaagctg gaactttgtt taagtaaact ttgtcagcat
    21181 ttgcaccatg gcatactgcg cattttttaa aaagtgtagc accatctgca gcaaaagcag
    21241 aaacaccaag acatgccaaa gcagaaacta ctaataattt tttcatttgt tttctcctta
    21301 gtaaaaatta gattgctagg tattatatat ctttattttt aataaaaatc ttaagaaatt
    21361 aaagataatg tttattttct ttttaaaaaa gctatattat aatgttttta tgaaaacaaa
    21421 agcattattt ttagatagag acggtgtgat taatatagat aaaaaatatg tttataaaat
    21481 agaagatttc gaattttgtg atggaatttt tgaactttgt agatattttt tggctagaaa
    21541 ttatttgctt tttatagcga caaaccaatc aggcattgca agaggatatt acaaggaaag
    21601 tgattttttt aagctttgtg attatatgct taaagaattt gctaaacaag atataaaaat
    21661 tgataaaatt tatcattgtc cgcatttaga aggttgtgag tgtcgcaaac ctaaagcagg
    21721 catgctttta aaagcaaaag atgagtttga tttagatatg aaaaattcta tctttatcgg
    21781 agataatcta agtgatatgc aagcaggatt aaatgctgat attggcactt tgattttagt
    21841 gaatgaagaa aaaaaagaag gtgatttttt tagacaattt aaaaatttaa aagaaatttt
    21901 gaactttttt aaggaaaagg atatttaaat gaaaatagca atcacaggtg gagcaggatt
    21961 tataggttcg caactagctt taaatttgca agaaaaacat gaaattttaa tcatcgataa
    22021 aatgcgtagt agtgcgactt ttgaaaatgg aaatttgcaa agttttgggc attttaaaaa
    22081 tttacttgaa tttgatggag aactttttgc aggcgatatt aacgatgaaa aagttttaaa
    22141 aaagattgaa gattttaaac cagagattat ttttcatcaa gcagcaattt cagacactac
    22201 ggtttttgat caaactaagg ttttgcaaac caatttaaat acttttaaag attttataga
    22261 acttagcata gatcttaatg caaagcttat ttatgcaagt tcagcttcgg tttatggtga
    22321 tgcaaaaagt ccacaaactg taggtaagga tgaagaacca aaaaatcctt atgctttttc
    22381 aaaattgatg atggataagt tagcgaaaaa atattacgat aaagctcatt tggtaggact
    22441 tagatatttt aatgtttatg gaaaaggcga attttataaa aacaaaaccg cttctatggt
    22501 tttgcaattt ggccatcaaa ttttagcagg aaaaaatcca cgattgtttg aaggaagtga
    22561 tcaaatttat agggatttta cttatattaa agatgttatt agtgctaatt taatcgccct
    22621 tgattcaaaa tgtggggttt ataatgtagg cagtggtaaa gcaagaacct ttcaagatat
    22681 agttgatatt ttgcaaaaag agttaaagac tgatttgcct tgtgaatata tcccaaatcc
    22741 ttatgtaaaa tcttatcagt tccatactga agcaaaacta gatcaaactt ggaattatca
    22801 gccaaaattt agccttgaag agggtataaa agattattta ggcgagataa aaagactttt
    22861 tgaaaaggaa gtaaatgctt gagtttttaa gtcagcaaaa acctaaaatt ttgattatag
    22921 gagattttat ggtggataat tacacttggt gtgattgttc gcgtatcagc cctgaagccc
    22981 ctgttttaat agctaaaact cttaaagaag ataaaagatt aggcggggct gcgaatgttt
    23041 atgcaaattt aaaaagcttg ggagctgatg tttttgcgct cggtgttgtg ggcgatgatg
    23101 agagtggaaa atttttacaa gaaaatttaa aaggagaatt tttgatccaa aaaggacgca
    23161 aaactccttt taaaaatcgt attatggcgc ataatcagca ggttttaaga ctggatgaag
    23221 aagatataag tgagattttg cttgaaaatg agcttattgc tttgtttgat gaaaagatta
    23281 aagactttaa ggctgtggtt ttaagcgatt atgccaaagg tgttttaacc cctaaagttt
    23341 gtaaggctgt gatagaaaag gctaaggttt taaatatccc tgttttggtt gatcctaagg
    23401 ggagtgattt taacaaatac agcggtgcaa ctttacttac acctaataaa aaagaagctt
    23461 tagaggcttt gaaatttgaa aatttagagg gtgaaaattt agaaaaaggc atcaaaaaat
    23521 taaaagaaga tttttctttg cgttattcta tcatcactct ttcagaagct ggaattgcac
    23581 tttttgatga gggtttgaaa atcgcacctg ctaaagcctt agaggtttat gatgtaacag
    23641 gagcgggcga tagtgtgatc gcagttttgg ctttttgttt ggcaaatgaa attgaaattt
    23701 ttaaagcttg cgaacttgcc aatgaagccg cagctgttgt ggtaagtaaa ataggtagcg
    23761 tgagtgtgag ttttgatgag attaaaagtt ttaagcgcgt ggattttgag aaaaaaatca
    23821 aaagcaaaga agaacttttg gtacttttga aacaaaataa taaaaagatt gtttttacaa
    23881 atggttgttt tgatatcgtg cattttggac atataaaata ccttgacaaa gctaaaagat
    23941 tgggcgatgt tttgattgta ggtttgaact cagatgcgag tgtgaaaaga ctcaaaggcg
    24001 agagtcgtcc tgtaaattca gaatttcaaa gagcttgtat gttggcagct ttttattttg
    24061 ttgattttgt agtgattttt gatgaagaca cgcctttaga acttataagc tttttaaagc
    24121 ctgatatttt ggttaaagga gctgattata aagataaact tgttgtaggt gcagatatcg
    24181 tttcaagggt tgaattaatc gactttgaag aaggatttag tacaagtaag atcatagaaa
    24241 agattaagga taaaaaatga taaatttagt ggaaaaagaa tggcaagaac atcaaaaaat
    24301 tgttcaagca agcgaaattt taaaaggaca aatcgctaaa gtaggtgagc ttttgtgtga
    24361 gtgtcttaaa aaaggtggta aaattttaat ttgcggaaac ggtggaagtg cggctgatgc
    24421 tcagcatttt gcggctgaac ttagcgggcg ttataaaaaa gaacgcaagg ctttagcagg
    24481 catagcactt acaaccgata cttcagcact tagtgccata ggaaatgact atggttttga
    24541 gtttgttttt tcaagacaag tggaagcttt agggaatgaa aaggatgttt taatcggtat
    24601 ttcaacgagc ggaaaaagcc ctaatgtttt agaagcttta aaaaaagcaa aagagcttaa
    24661 tatgctttgt ctagggctta gcggaaaagg tggtggaatg atgaataagc tttgtgatca
    24721 taatcttgtt gtgccaagcg atgatacagc tagaattcaa gaaatgcaca ttttaatcat
    24781 acacacactt tgtcagatca tagatgagag tttttaagta aatttttagc ctgttctatc
    24841 actttttcag gctttagatc tttcatgcat ttgtggtgtt ttaaagggca ggttttttgc
    24901 atacaaggca tacaagctag atctaaatgc actaattttg cattttcatt ttgccaaggt
    24961 gaagtttgag taaatttcgt agggccaaaa atagctacgg tttttacctt ataaaccgca
    25021 cttaggtgca taggtccact gtcatttgtg atgaaaagat cgcaaaaagc gatattttga
    25081 caaagggttt tgatggtggt tttattgcaa agatttttta cttttatgtt ttgttctttt
    25141 aaaatttgat aaatttcatt acaaagttct tgttcggctt ttcctgcacc aaagattaaa
    25201 atatcatgac tttggctgaa atttaaagcc actttagcaa aataactcgc atcccatctt
    25261 tttgcacttc caaagcttgc accagggttg agtcctagaa tttttttacc atttcttaag
    25321 ataagagggt tttgaaattt tagcttaaag ggaagcttta agtccttaaa atgagctttt
    25381 atactaagtg aattttctat aaaataaagg tattttaaaa cttgatgttc ttctttgtac
    25441 ttgtttttgt caaaaaaata tctttgtttt gttttaagga tatgcaagat aatcttagaa
    25501 gagaacgcag atctaaaagc aaagctaaga tcgattttac caagttcttt gcgtaaagat
    25561 agagcttgtt tataacggga tagtttattt tctatgatga ttttagaatt aggaaattct
    25621 ttaaaaagtg ctgtagaaac aaaagaacca taaaggataa actgagcatc tttaaaatgt
    25681 tcttttatag tgtataaagc aggtgaagcc attaccgtat cgcctaacca ggtgggaaga
    25741 tgtataaaaa ttttcataaa tttcctaaac tttgatagaa ttgtttttat tattttaaca
    25801 aaatttagga aaaatatgcc acaactttct atcataatcc cgctttttaa ttcttgcaat
    25861 tttatctcaa gagctttgca aagttgtata aatcagactt taaaagatat tgaaattttg
    25921 attatcgatg ataaaagtaa agataatagt ttaaatatgg ttttagaatt tgctaaaaaa
    25981 gatccaagga taaaaatctt tcaaaatgaa gaaaatttgg gcacttttgc aagtagaaat
    26041 ttgggagttt tgcattctag ttctgatttt ataatgtttt tagatagtga tgatttttta
    26101 actcttgatg cttgtaaaat agcgcttaaa gagatgaaaa aaggttttga tttgctttgc
    26161 tttgatgctt ttgtacatag ggtaaaaacc aagcaatttt atcgttttaa acaagatgag
    26221 ttttttaatc aaaaagaatt tttagaattt ctaagcaaac aaaggcattt ttgctggtcg
    26281 gtttgggcta agtgttttag aaaagatatt atcttaaaaa gttttgaaaa aattaaaata
    26341 gatgagcgtt tgagttatgg cgaagatgtg cttttttgtt atgtttattt tatgttttgt
    26401 gagaaaatag ctgtttttaa aacttgcatt tatcattatg aatttaatcc aaatggaaga
    26461 tatgaaaaca aaaataaaga aattttatgg cagaattatc aagataaaaa gaaaagcaat
    26521 gaacttgtaa aaaagctttg tttaaacttt aaaaataatg attttcataa gaagttgttt
    26581 gaggttttag agaaagaaga atttgattta caaagaaggg ttgatgaagc aagaaattag
    26641 tagtttttgg tatacaccta gaggttataa aggtattggt ttaatggagc ttttatctat
    26701 aaaatctttt atagataatg gttataaatt tatactttat acttataatt tagatgataa
    26761 aatttttaaa aaattagatg aattatttga tgattttgaa ttaaaagatg caaatgaaat
    26821 tgtttctttt aaaaattatt ttagagacga taggggatct ggagtagcag cgtttagtga
    26881 ttattttaga tacaatttac tttatcttaa aaaaaaaagg gggggggtat gggtagatct
    26941 tgatatgata tgtttaaatt atattgattt aaatgaagaa tatatcttta cacaagaagt
    27001 ggatgaagat aataaaaaat caagaatcac aacatccttt ttaaaatttt ctcgatattc
    27061 agattttgga aaaaatctta tacaagaagc agaaaaaatc attaataaaa gaaaaaaaat
    27121 ctcgtggggt gttataggac cttggttttt agctgatcat gtaaaaaaat gtggtttaga
    27181 aaattttgtt tgggattata aaagaacttg tcagattcca tggtgtaatg taaaaatttt
    27241 tttagataat acttcaatag atatcagtca acctttctta catttatttt cagaaatgtg
    27301 gagattaaat aatatggaga aaaatacttt tcatcaaatg ggagtttatg gacaactttt
    27361 aaaaaaacat gagatagaaa aattatataa tcagataaat acttgtttaa aaacatcaat
    27421 gctagataat atagcatcct ttttaaccaa gttttttata aaaaaattat aagaagctta
    27481 tattattaac tctttttaaa tcctctgttg tatctatatc caaactagct ttttcgtcca
    27541 ttatatagca acttgttttt tcttgtagaa aagttgggtt atttaaaaat aaatttgact
    27601 ttactatata aattgcacca ttactcatat aagtttttgg taatttttgt ctaggcataa
    27661 atggatattt gttatcacaa attcctttta agttaccatt atcatctata aaagctttta
    27721 aaattttatt atcacattct acaacactta ttaatgcatt tgagttttca tttttaaatt
    27781 ttaaaaaagc ttcatctata tgtacatttg tccttaaagg agaagtgggt tgtaataaaa
    27841 caatattttc ataatcttta taaaaactca aggtatgcaa tacaacctta tcactagttg
    27901 tatcatctag cgctaattct ttaggtcttt ttaacacatc tacaccttga gtttgtccat
    27961 attctaatat atcatcgcca tcactactta aaacaatttt atctacatac tttgaatttt
    28021 ttgctgcatt gatagtataa tacaacaaag gcctatcatg caaaagagct aaatttttat
    28081 tttttatacc ttttgaacca gctcgagcag gtattatagc taaagtcatt tttttaccac
    28141 tcaatttaaa tttatctaat atttcacgaa ttactttttc atcaagcatt gtataattta
    28201 ttttctttat ttttctatgt ctataatgga tttttttaaa atcttctaaa gttaaagcat
    28261 ccaaatgttt ttgataatca tttctatgat attttaaagc aggaaaatgc cattgaagta
    28321 attctgcttg taagattttt atatgtttgg gtataatttg ctgttcagaa tacaattctt
    28381 tcacagtttt ttcaggatca atccactgac tttgctttga aaccattctt tctataaata
    28441 cactattgca cttttgaatt aacaattgat cccctccatc gataaaacca cattctccta
    28501 tattttgaat tacaatttta tctagtatta aaaaattaat tcttggaaat ctaacagcag
    28561 tattttttga tgccatataa aaactcttat ataatttttt tgcatcatag taatgatcca
    28621 catctatttt tataagccac tcatcttgcg gtataaaact agctacatag ttataataac
    28681 tatgaagttt attttcttcg ctttgcggat tttcaatttg cacctcatgg ggatatttta
    28741 ctggtataaa cgaagggtat tgtttgcaaa attccaaaat aatttcttca cttccatcag
    28801 tataatcatt atatcctata acacctcttt gtatggcagg taacatactt tcaagtgata
    28861 ctcttaaagt agtggcttca ttttttactc ttataaaagc ccatggattt aaaggagatt
    28921 ttgtatcttt tgagtttgga tcaaaatcaa aaaaaccttt atgcttttca tcgtagattt
    28981 ttttatttaa gttt
//
LOCUS       DAPIVO010000013        28828 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.013, whole genome shotgun sequence.
ACCESSION   DAPIVO010000013 DAPIVO010000000
VERSION     DAPIVO010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 28828)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28828)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28828
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.013"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(102..1139)
                     /locus_tag="RJ239_000568"
     CDS             complement(102..1139)
                     /locus_tag="RJ239_000568"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005021248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II asparaginase"
                     /protein_id="HDV7330705.1"
                     /translation="MKKLFICCLFIGVCMKKAKSRIAILGTGGTIAGFIDSTIATTGY
                     TAGAIDIDVLIKAVPQIRDLADISWEQIANIDSSNMCDEIWLRLAKKIAKLFAEGIDG
                     VVITHGTDTMEETAYFLNLTIKSDKPVVLVGAMRPSTAISADGPKNLYNAVALVANKE
                     AKNKGVMVAINDKILSARGVVKTHSLNVDAFSSPDFGDLGYIVDGKVFFYNNVTKAHT
                     KNAPFDVSKLTSLPKVDILYSYSNDGSGVAAKALFEHGTKGIVVAGSGAGSIHKNQKD
                     VLKELLKKGLKVVVSSRVVAGCVAVSDSDEKLGFISAEDLNPQKARVLLILALTKTSD
                     PKKIQEYFLKY"
     gene            complement(1193..2764)
                     /gene="recJ"
                     /locus_tag="RJ239_000569"
     CDS             complement(1193..2764)
                     /gene="recJ"
                     /locus_tag="RJ239_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HDV7330706.1"
                     /translation="MKIINKNEIKKILASRFEKDLHTKLCDLPLPCCLKDAYKAANRI
                     KEAVEKNEKVAIVGDYDVDGIISCVIMAEFFDDIGFDYIIRIPNRFKDGYGLNAEIIN
                     ELDVNLIITVDNGIAALEAAKLCKEKNIDLIITDHHMPQDVLPDAFAIINPKQKDCDF
                     PEIEICGAQVAWYLIAALKEVCKLKYDMCKFLELLAIAIVADMMELRDLNRALVRRGI
                     DHINKSKRAAFRAIKHYYQKDKFALDNIGFLIAPLINSAGRMDDASISYEFLHTKDFN
                     KALEYLEQIVSFNESRKDEEKQLFEDSLNQIDENDSCIVVSGLNWHEGVLGIVASRLA
                     KHFNKPAFVFSQNEEHLKGSARSVGKIDILALISKTNSILSNYGGHKGAAGISLNSEN
                     FEQFKNKIKKECSQISESEFLDTDEILGILEPSEIDFEMLEILESFEPFGHKNPRPFF
                     VLENLCVKNKKLLGKDEKHLKLVLTKENKTIEALFFNFDKEPELNQNISLLGSISKNE
                     FRGMVTPQFVVKEIL"
     gene            complement(2751..4382)
                     /locus_tag="RJ239_000570"
     CDS             complement(2751..4382)
                     /locus_tag="RJ239_000570"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HDV7330707.1"
                     /translation="MKQTKYIFVTGGVLSSLGKGIAAASIATLLKNSGLKVSILKADP
                     YINVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFLDESLSQDNNFTTGRVYQSVIE
                     KERRGEYLGKTIQVIPHIVGEIKDRIKKAGEGKDILIVEIGGTVGDIEGLPFLEAIRA
                     LRLEVGKNNAMNIHLTLVPFIKAAGELKTKPTQHSVGELRRIGISPDMIICRSEKALD
                     RDLKDKIAISCGVEKNCVIESVDAASIYQIPLNFLKQDILSPIAEILDLKNLKPNMEN
                     WDSLVKRVIAPSNEVKIAFVGKYVDLKESYKSLTEAIIHAGAALDTKVELKWVDSEKL
                     ENMESAEVFKDVSGILVAGGFGYRGVEGKIKAIQYARENKIPFLGICLGMQLALVEFA
                     RNVLKLKDANSSEFDEKCQNPVVYLIDEFMDTNGEKQIRTAKTPLGGTMRLGAYKCDI
                     KEKSLLAKVYNEAKSVKERHRHRYEANPKYRADFEKHGLIVSGESKGLIEAVELNCHP
                     FFLAVQFHPEFTSRLEHVNPVICSFIKAAINYEDN"
     gene            4502..5125
                     /locus_tag="RJ239_000571"
     CDS             4502..5125
                     /locus_tag="RJ239_000571"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HDV7330708.1"
                     /translation="MQITLLFHTPLSVCSHATRTCWQSFEKGDCGGEKDKELIDRVGN
                     KFKHASTLEHLNYTFYIQGISRACLQEVARHRHTSPSVKSTRYTLKELRNEAEFKIGD
                     FENASRYLVLCGNEEVDNASIKALENLRTILQKSISLDIAKYCLPESYKTELTLTINA
                     RSLQNFISLRSSKSALWEIRNLANALFEALPQEHKFIFEHCLHKDIE"
     gene            5245..6630
                     /locus_tag="RJ239_000572"
     CDS             5245..6630
                     /locus_tag="RJ239_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HDV7330709.1"
                     /translation="MDKQFFQDFLMLSQAHTITTLAMLCVVFYALKKMRDIKINFSLR
                     MLFALLMGLGFGFALQYLANFPDAKEASNILWYSETKHWFAFVSSVFVAFIKMLVVPL
                     VSICIIKVIIEIDKNIKISSLLGISLFWILFSTAIAATLGIFLGYSFDLGSNFAIYEG
                     NKQIREIQTFSNIILGLIPSNIIAAINKENIIAIVIFSFFIGISAKKISKKEEYEQAF
                     KSFHNFILTFYNIMMNMTATVIRFMPYAVVCMMANVLLSNGFEAIKTAGLFIMLIYIA
                     MLIMFGVHFLLLASQGLNPIKYAKKAFPVWLFAFSSRSSLGTLPMTTSTLQNKFGVNS
                     AIANFVASIGTTTGLNGCAGYFPALAAVFVAFATHTHIDFTFALMIVLVAVIGSLGIA
                     GVPGSATMAASIMLAGIGFGNNFVMLSLILAIDPIIDMARTASNVSGAMTSALCTAKN
                     LKALDKEIYNS"
     gene            complement(6669..9038)
                     /locus_tag="RJ239_000573"
     CDS             complement(6669..9038)
                     /locus_tag="RJ239_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HDV7330710.1"
                     /translation="MKVIKRNGRTEELDVSKIKKCTSDAVKDLEGVNLSELELDAKIQ
                     FRDGISTEEIQKTLIKTAVDKIDIDCPNWTFVAARLFLFDLYKKVNGMNRYNHLCEYF
                     EKGEKEGRILLGLKEKYDLDDLNAYIKPERDMQFTYLGIKTLYDRYLIKDSKGMPIEL
                     PQQMFMAIAMFLAQNEFNPQEWAKKFYDLISKFELMLATPTLSNARTTRHQLSSCYIG
                     STPDNIEGIFDSCQEMALLSKFGGGIGWDWSKVRAMGGSIDGHKNAAGGIIPFLKITN
                     DIAVAVDQLGTRKGAIAVYIEPWHMDISDFIDLRKNSGEERRRAHELFPALWINDLFM
                     KRVRANDKWTLFDPADTADLCDLYGEAFEKRYEEYEKDESITKEIVEAKELWKKILLN
                     YFETGLPFLCFKDSANRANPNAHVGIIRSSNLCTEIFQNTEPNYYQIKVVFENGDELH
                     FDEEQKVVIDGGYEKPAKKISTLDSIDGNKVYIVEKYKNDGKTAVCNLASINLSKVYT
                     KEDIERVVPTAIRMLDNVIDLNFYPHRKVKDTNLKSRAIGLGVMGEAQMLAEAKIHWG
                     SDEHLNKIDEIMEQISFEAINASSNLALEKGSYEDFEGSNWSKGIFPIDVASPKAKAL
                     TLREGLFDQSECDWVKLREKVKKDGMRNGYLMAIAPTSSISILVGTTQTIEPVYKRKW
                     FEQNLSGMIPVVVPNLSLDTWQYYTPAYELDQKILVKAAAVRGKWIDQGQSLNIFLSL
                     DKASGGYLNEIYQLAWELGVKSTYYLRSESPDSEKVNVADRSIECEGCQ"
     gene            complement(9054..10382)
                     /locus_tag="RJ239_000574"
     CDS             complement(9054..10382)
                     /locus_tag="RJ239_000574"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDV7330711.1"
                     /translation="MVERYSREIMAKKWDMQAKYDAWLKVELAAVKAWNKLGLIDDTD
                     CEKILKNAKFDIARIDEIEKTTKHDVIAFLTSVSESLGEESRFVHYAMTSSDCIDTAV
                     ALQIKESLELILEDVSLLLEAIKKRALEHKNTLMVGRSHGIHGEPITFGLVLAIWYDE
                     ISHAKELLEHAKEVISYGKISGAMGNFAHAPLEFEEEVCKNLGLKAAPVSNQVIQRDR
                     YAQVVSAIAILASSCEQIAVAIRHFQRTEVYEAEEYFSVGQKGSSAMPHKRNPVLSEN
                     ITGLCRVLRSFVTPALENVALWHERDISHSSVERFILPDAFITADFMLMRLTNLIDKL
                     LVYPENMMKNLNLTGGLVFSGRVLLELPFKGISREEAYKIVQRNAMKVWADLQNGKAA
                     INEKNESLFLLALLSDEDLRKSLSEEDVRKCFDYNYYTKNVDAIFKRTFK"
     gene            10460..11362
                     /locus_tag="RJ239_000575"
     CDS             10460..11362
                     /locus_tag="RJ239_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDV7330712.1"
                     /translation="MAYIKIKLSNNGKKAFQVLMENLKISINEAQKLIDKKRLFCDGI
                     LVEEKNKILNGLVELIVYENNPKGVEIVFENEDFAILEKESGILSHPNGRHCKYSLSD
                     EIWHLWGKEACVAHRLDKETSGLILVAKNKKAQIDLKALFEKKLVQKEYLALANGKIE
                     ENFIIDKAINLAKNYDDVKTRMQICKEGKQAITEFEILEYFPKINATLLLCKPLTGRQ
                     HQIRVHLHYKNHTILGDPLYGLSKEQIESILDEKLTPKERLKLTGALRLCLHSYRLKF
                     QYKNQNFNINSKINIKEIFNNSIK"
     gene            11475..12353
                     /locus_tag="RJ239_000576"
     CDS             11475..12353
                     /locus_tag="RJ239_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HDV7330713.1"
                     /translation="MKFVNFIQGQKPNLGVLNSSGKIVSFDDLGIETNDMNEFIIHFD
                     KFKHKLTDLDSKIAYEIPQENYLAPIIEPRQDIICLGINFLDHAKESAKFKGEKFEER
                     EYPVYFGKRCNQATPPFGDIPLHADVTSQLDYECELAFILSKDAYKIKAKDAKDYIFG
                     YTIINEISARELQKRHKQFYRAKSLEGSTIMGPYITSVDEISYPPKLQLQSYVNDELR
                     QNSNTQLFIFDIAYVLEELSAGMLLKAGSIISMGTPSGVGMGLNPPTFLKSGDKVRCV
                     IENLGELCNKIKNINY"
     gene            12417..13331
                     /locus_tag="RJ239_000577"
     CDS             12417..13331
                     /locus_tag="RJ239_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HDV7330714.1"
                     /translation="MKKIIMILCLSYANIVFAVDMITPIPNSISYDKEKAELGKSLYM
                     DKSLSKDGKVSCNTCHRLDRHGVDGLEFSIGVDNQLDKPFNTPTTFNSVFNFVQFWNG
                     RAKDLTEQAMGPFFNPKEMGLSPELLLQKVNSNENYVKTFKKLYGEVTVENIALAIAE
                     FEKTLITPNSPFDRYLSGDQNAISAQAKKGYEDFKANGCISCHQGQNIGGNMFQKIGI
                     FEEYPNQEDLGRYEITKREADKMVFKVPSLRNIAKTAPYFHDGSIPTLDACVQFMAYY
                     QLGKFLDQETVDNIVAFLESLTGEYHDK"
     gene            13321..15099
                     /locus_tag="RJ239_000578"
     CDS             13321..15099
                     /locus_tag="RJ239_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HDV7330715.1"
                     /translation="MTNKKSSFLIKFIILSTLVLTFILVLLAIIFNNYSSSKDNKDLI
                     NIVQQLEISDEKINSIFQNSFNFINYDPSVQAIKKMQENFAKLKTFGIDISKAEEIFN
                     AKLIQLNYFKSANSIAVNSKLYLFELAKNYFEELEQNHETNKNNYKTMNSMLSVLSTE
                     SILQKTTLNQLNSLMKEIKNDAKNENLQLFLKHYKMIVKQISIMQDNSSIYENNSLMK
                     ELKQLDTFTQNTIEQSNLFKFYIALAVFGITIVLFVFFILLTLKKVIIPIHTLEKLSA
                     NLASKEANLHSRLNIDPKSELGQSAQYINSFISTVQNSIIEAIENAKSSHQNSQKLKN
                     NSMMLENSSNSQHEQIQGVKEITHVLDDHINLAGNLAQESIENMQDMHILMDKVELTL
                     SELVNLINENNEKEQNVVANMDSLTQSADNIIEITNSIKDIADQTNLLALNAAIEAAR
                     AGEHGRGFAVVADEVGQLADKTSKSLLNINATVNTIVQQINDNKALMDLIHDSMKETS
                     SKTNDLQQELVNSMHKLESSIESTQTMKDKSMEVKDKMLILGTNIDKVNELANSVKDL
                     SCEINNISQNVLNGASKLSEKLSSFQ"
     gene            15205..15372
                     /gene="dba"
                     /locus_tag="RJ239_000579"
     CDS             15205..15372
                     /gene="dba"
                     /locus_tag="RJ239_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein Dba"
                     /protein_id="HDV7330716.1"
                     /translation="MEFLELLLVLIALILIIKKPEKENLAFGLVMVAWLLMVFFYVGH
                     KTGALLTIMNL"
     gene            15384..16910
                     /gene="dsbI"
                     /locus_tag="RJ239_000580"
     CDS             15384..16910
                     /gene="dsbI"
                     /locus_tag="RJ239_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbI"
                     /protein_id="HDV7330717.1"
                     /translation="MNEINKTKNFYTLMCLAGFLIILLPVGIANLIFGYMLGDSPCTL
                     CWGQREAMIFIGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGF
                     GLAVFGIHTYFWAEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVL
                     ISAIIVASNVFQAFVSTGIPPYVGQGDPVRFSLNPKYIIWSKEGWNGLWQNISFLGKR
                     DVKAPDYAFAPASEKLGIKFDNDINNAPFAKINDELKITNEQTINFDKAINTLDYINN
                     EFVASSKWDVAFLDNNFSVKEGFELDPYFSASIDPIIGIIPYMNDKFILMGSNKSFLR
                     FAKNPNASEEDIAKQYADFVKGNDKFKGQGEGLGRGRLDTVRAKFNHVASMTTDGNYL
                     YLATVPNNKDAKTFVISKVSLKDRVLSGEFTPKANLKEGKTLGDLYVTSMTFKDGEIY
                     ALSKNHNVIAVIDPVKEEVVKTIAFPSSITNARSIFFKDGKINILSYQDGANKLYTLN
                     "
     gene            complement(16931..17605)
                     /gene="queC"
                     /locus_tag="RJ239_000581"
     CDS             complement(16931..17605)
                     /gene="queC"
                     /locus_tag="RJ239_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HDV7330718.1"
                     /translation="MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKE
                     RECFKQICKALKVEKSYILDVSFIKDIGGNALTDKSIDIPKNELCISDTPPITYVPFR
                     NGIFLSIAGSLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVC
                     IKTPLVRLNKAKIVELALKENVPLELTWSCYESEDEACGKCDSCLLRLRGFEKAGFKD
                     KIKYKS"
     gene            17682..18908
                     /locus_tag="RJ239_000582"
     CDS             17682..18908
                     /locus_tag="RJ239_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD family hydrolase"
                     /protein_id="HDV7330719.1"
                     /translation="MINIKLIEHIFKAASISRWNDYPRMANLVELDKQAHKFIIAYFI
                     AKMEKDVDMRVIIEGGIFEFLSRVVVTDIRPDVYHEIVRQKKAEVNAWVLSKIEPMIE
                     DIEDGEFLKRFEAYLNGNAYAKEKLILKAASYFATRWEFNIVYQTSAFLNDIDEIKNK
                     VEEELEDYYELIGARKIALNQKIAKIIDLSGRLRFQKRWAQTPRIPETAVLGHMLVVA
                     ILGYFYSLKIKACDKRLENNFYCALFHDLPESLTRDIISPVKYGIDGLHDIINDYEMK
                     LINEKILPFVPEGLRGEFSYILGIREGRNGESNFVKNEFENRTYKNAKIELCSGSLSS
                     FNENEFGAIDGKVLKYCDKIAAYIEAGLSISYGVKSKELESGFLGMHEFFKENPTIDG
                     VNFFEICESLREYFKI"
     gene            19000..19396
                     /locus_tag="RJ239_000583"
                     /pseudo
     CDS             19000..19396
                     /locus_tag="RJ239_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343486.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1440 domain-containing protein"
     gene            complement(19408..21084)
                     /gene="ilvD"
                     /locus_tag="RJ239_000584"
     CDS             complement(19408..21084)
                     /gene="ilvD"
                     /locus_tag="RJ239_000584"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HDV7330720.1"
                     /translation="MRSDAIKKGHLKAPNRSLLRACGLKDEDFDKPFIGVANSYIDII
                     PGHYFLNDYAKIIKDEICKNGCVPFEFNTIGVDDGIAMGHEGMLYSLPSREIIANSIE
                     TVMNAHQLDALICIPNCDKITPGMLMGALRVNVPTIFVSGGPMASGVTKKGEKISLSS
                     VFEAVGAYEAKKISEEEFKDIECSACPSGGSCSGMFTANSMNTLCEAMGIALEGNGTI
                     LALSKEREELLRKAARRICEIALDERFKIRNIITQKAVRNAMVVDMAMGGSSNTVLHM
                     LAISREAGVALDIKDLNFISSKVAHIAKIAPSLNSVYMDDIHKAGGVSAVMAEISSRQ
                     GHILELDALTITGESLEERLKNAKIKDENIIRKVDNAYSKVGGLAILFGNLAEQGCVI
                     KTAGIIGERKFKGKAVCFNSQDEAIKGIIKGKVKKGNVCVIRYEGPKGGPGMQEMLSP
                     TSLLMGMGLGADVALITDGRFSGATRGLSVGHISPEAAEGGLIGLLKDGDEIEIDVDA
                     YTIHANLSEEEITQRKKEFVLPQKEVPSRWLRMYQKLVSNASKGAVLDME"
     gene            21244..21891
                     /locus_tag="RJ239_000585"
     CDS             21244..21891
                     /locus_tag="RJ239_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="desulfoferrodoxin FeS4 iron-binding
                     domain-containing protein"
                     /protein_id="HDV7330721.1"
                     /translation="MRQYETYKCQKCGNEVEVQNVGGGKLSCCGEEMKCITTDLTAVN
                     LMKAFAGESMARNKYDLFADVAEEEGWHAVARHFREAAENEKWHARAEFKAYHEIVDG
                     KPLEVTTKNLVTAAEGENYEHTTMYPNFAKIAEDEGKKAIARLFTAIGKVEIEHEREY
                     LALKKMLEEEEFFNSEVEELWVCEVCGHIHRGKKAPAACPLCKAPKEYFKREFLG"
     gene            21956..22195
                     /locus_tag="RJ239_000586"
     CDS             21956..22195
                     /locus_tag="RJ239_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HDV7330722.1"
                     /translation="MKKLLFLFFALTAFLFGAVNINTATLKELKSLNGIGEAKAKAIL
                     EYRKEANFTSIDDLKKVKGIGDKLFEKIKNDITVE"
     gene            22229..22804
                     /locus_tag="RJ239_000587"
     CDS             22229..22804
                     /locus_tag="RJ239_000587"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HDV7330723.1"
                     /translation="MKTLFDTKELLNEFDINLIGIDEAGRGALAGPMMMAACKLNKKL
                     DGLCDSKKLSEKKREELYEIIIKNSNYLILAFSSEQIDALGLSTCLKTGLKLIKKHFK
                     AENNFLYDGNTNLGINGIKTQIKADTSILQVSAASILAKVSKDRVMNFLAKDFPCYEF
                     EKNKAYGTKAHKEVIAKFGICKLHRKSFKLL"
     gene            complement(22805..24250)
                     /locus_tag="RJ239_000588"
     CDS             complement(22805..24250)
                     /locus_tag="RJ239_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HDV7330724.1"
                     /translation="MGNARGFLDFKRMDFKKIAPKERVLNYKEFTIPLDKKEQEIQGG
                     RCMDCGVAFCHTGVMSEGKDVGCPLNNLIPEWNDLIYRSLWEEAYERLDLTNPFPEFT
                     GRVCPAPCEDSCVCAINGTSVSIKNNELSIIENAFKENLVRVNKPKQYNGKKIAIIGS
                     GPAGLACANTLNSLGYKVSVFERSDKIGGLLMYGIPDMKLDKSIVDRRVDLLKKSGIE
                     FKVNENIDSKDKVSKLLKEFDALVLCTGASKPIDLDIEGRKLKGVEFALDFLTQNTKT
                     LLKTGKGADAAKGKNVLVIGSGDTSVDCIAVATRQGAKSIVRFERSPKRPLQRSQNNP
                     WPLKADIFTTDYGLEEAIAVYGKDPREYQKMTKKFLGKTHVEGVEANDLKREFKEGKA
                     INVEIPNSKKTYKVDLVLLAMGFSGCEEAIAKNFGVKLDEKNNISTENFQTTHKKIFA
                     CGDARKGQSLVVWAIKDGIECALSLHQNLAK"
     gene            complement(24260..28750)
                     /gene="gltB"
                     /locus_tag="RJ239_000589"
     CDS             complement(24260..28750)
                     /gene="gltB"
                     /locus_tag="RJ239_000589"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HDV7330725.1"
                     /translation="MDLENILENNQSIGLYHPKNEHDACGIAAVANIRGIASYKVICD
                     ALEILMNLEHRGGAGAEENSGDGAGILIQIPHDFFKTQELGFELPKKGDYAVAQMFLS
                     PNTDAKEEAKEIFLQGLKDKKLEFLGFREVPFNPSDIGASALKAMPYFLQAFVKKPSK
                     ISAGLEFERVLYSTRRLIEKRAINVPKFYFSSFSSRTIVYKGMLLSTQLSDFYLDFKD
                     VNMKSAIALVHSRFSTNTFPSWERAHPNRYMVHNGEINTIRGNVDSIRAREGLMQSEY
                     FENLDEIFPIIAKPSSDSAMFDNTLEFLALNGRTLEEAFMMMVPEPWHKNENMESKKR
                     AFYEYHSLLMEPWDGPAAIVFTDGVIMGASLDRNGFRPSRYYLTKDDMLILSSETGAL
                     KLDEKNIKAKKRLEPGKLLLVDTARGRVIADNEIKEHYANAKPYKKWLKNLVELEKQK
                     SGVYKHQFLKEDEVLKLQKAFGWSYDELKMSVAAMAQNGKEAIAAMGVDTPLAILSKT
                     YQPLYNYFKQLFAQVTNPPLDAIREEIVTSTRIYLGSEGNLLKPDENNAKRVKIALPV
                     ISNEELFEVKALNKFQVKEFSILYDYSKKTLEKALDELCVKIEDEVKKGVSIIILSDK
                     GVDEKNAYIPALLAVSGVHNHLVRKNLRTHTSLIIESGEPREIHHFACLLGYGATVIN
                     PYLVYESIQKLIANKDLNLSYEKAVENFIKASSSGIVKIASKMGVSTLQSYNGSALFE
                     CLGLSSKVIDKYFTSTTSRIEGMDLEDFEKELIALHKHAFNDTHKALDSKGIHGFRSA
                     KEEHLIDPLVIFNLQQACRNKDYKSFKKYSALVDEKQVNLRSLMEFDFSEAISIDKVE
                     SVESIVKRFRTGAMSYGSISKEAHECLAQAMNKIGAKSNSGEGGEDEERYEIKEGVDK
                     NSAIKQVASGRFGVDLNYLSHAKEIQIKVAQGAKPGEGGQLMGFKVYPWIAKARHSTA
                     GVTLISPPPHHDIYSIEDLAQLIYDLKHANKDAKISVKLVSENGIGTVAAGVAKAGAN
                     LILVSGYDGGTGASPRTSIPHAGIPWELGLAETHQTLILNKLRDRVRLETDGKLMNGR
                     DLAIAALLGAEEFGFATAPLIVLGCTMMRVCHLNTCPFGIATQDTELRDRFKGKVDDV
                     INFMYFIAEELREYMARLGFERLDDMIGRVDKLRQKSVQGKAGKLNLDKILKSLPTYN
                     RTAVHFKDYKDNKLEKTIDYRILLPLCKNAVEKKEPIKLSLEVGNQSRTFATMLSSEI
                     LKTYGKDALDEDSIHIKAIGNAGNSFGAFLLKGIKLEIIGDSNDYLGKGLSGGKIIAK
                     ISNEATFSPEENIIAGNACLYGATKGEVYLDGIAGERFCVRNSGALAVVLGTGVHGCE
                     YMTGGQVVVLGDVGANFAAGMSGGVVYIFGRHNEAHVNTELVDIKDLNAKDEKELKAV
                     IEKHITYTDSKKAKDILEKFDKKDFFKVTPRDYEKMLKMLDLCKNEKDPNLAAFLKIT
                     QK"
BASE COUNT         9641 a         5255 c         4164 g         9768 t
ORIGIN      
        1 aatgataata aaaaatacaa gatataatat actattaata ggattgaaag gcttgactta
       61 gggaagataa gttccctaag tttagaaata tttaaaaaat tttaatattt taaaaaatac
      121 tcttgaattt ttttaggatc acttgttttt gtaagtgcta atataagcaa aactcttgct
      181 ttttgaggat ttaaatcttc agcactaata aaacctaatt tttcatctga atcactcaca
      241 gcaacacaac ctgctacaac ccttgaactt acaacaacct taagcccttt ttttaaaagc
      301 tcttttaaaa catctttttg atttttgtgt atacttcctg ctccacttcc tgcaacaact
      361 atgcccttag ttccatgttc aaataaagct tttgcagcga caccactacc atcatttgaa
      421 tagctataaa gaatatctac ttttggcaaa cttgtgagtt tgcttacatc aaaaggagcg
      481 ttttttgtgt gagctttagt aacattatta tagaaaaaga ctttaccatc tactatataa
      541 cccaaatccc caaaatcagg agaagagaaa gcatcaacat ttaaactatg agtttttact
      601 acgcctctag cgcttaaaat tttatcattt atagctacca taacaccctt attcttagct
      661 tctttattgg caactaatgc cactgcatta taaagatttt tcggaccatc cgcacttata
      721 gcagttgatg gacgcatagc gccaactaga actacgggct tatcactttt aatggttaaa
      781 tttaaaaaat aagcagtttc ttccatagta tcagtaccat gagttatcac cacaccgtct
      841 atcccctcag caaaaagctt agcaattttt ttagcaagcc ttaaccaaat ttcatcacac
      901 atatttgaac tatcaatatt tgctatttgc tcccaactaa tatctgctaa atctctaatt
      961 tgcggaactg ctttaattaa tacatctata tcaatggctc cggccgtata tcctgttgta
     1021 gcaatagtgc tatcaatgaa gcctgctatc gttccgcctg ttcctaaaat agcaatcctt
     1081 gatttagctt ttttcataca tactcctata aaaagacaac atataaataa ttttttaatc
     1141 tcttgtatat taatttttta atgttattaa tgcaaattat aagtaaaaat ttttataaaa
     1201 tctctttaac aacaaactgt ggagttacca ttcccctaaa ttcattctta gaaatacttc
     1261 caagcaaaga aatattttga ttcaattctg gctctttatc aaaattaaaa aataaagctt
     1321 ctatggtttt attttcctta gttaaaacaa gctttaagtg tttttcatct ttacctagaa
     1381 gttttttatt ttttacacaa agattttcta aaacaaaaaa aggtcgtgga tttttatgtc
     1441 caaaaggttc aaaagattct aaaatttcaa gcatttcaaa atcaatttcg ctaggttcta
     1501 agattcctaa aatttcatct gtatccaaaa attcactttc agaaatttgc gaacattctt
     1561 ttttgatttt atttttaaat tgttcaaaat tttcagagtt taaactgatt ccagcagcac
     1621 ctttatgacc accataattg cttaatatag aatttgtctt agaaattaaa gctaaaatat
     1681 caatcttgcc aacacttctt gcgctgcctt ttaagtgttc ttcattttga gaaaatacaa
     1741 aagcaggttt attaaaatgt ttagctaaac gacttgccac aatccctaaa acaccttcat
     1801 gccaatttaa acccgatacc acaatacaag aatcgttttc atcgatttga tttaaactat
     1861 cttcaaaaag ctgtttttct tcatctttac gactttcatt aaaactaaca atttgctcta
     1921 gatattctaa agctttatta aaatctttag tgtgtaaaaa ttcataagaa atacttgcat
     1981 catccattct tccagcacta tttataagcg gagcaattaa aaatcctata ttatcaagag
     2041 caaatttatc cttttgataa taatgcttaa tagcccgaaa agcagccctt ttagatttgt
     2101 taatatgatc tataccacgc cttactaaag cacgatttaa atctctaagt tccatcatat
     2161 ctgcaacaat tgcaatcgcc aaaagttcta aaaatttaca catgtcatat ttaagcttgc
     2221 acacctcttt taaagccgct atcaaatacc atgcgacttg agctccacaa atttcaattt
     2281 ctggaaaatc acaatctttt tgctttggat tgataatggc aaaagcatca ggtaaaacat
     2341 cttgaggcat atgatgatca gtgataatca aatctatatt tttttcttta cagagtttgg
     2401 ctgcttcaag agcagctatt ccattatcta ctgttattat taaatttaca tcaagttcgt
     2461 tgatgatctc agcatttaat ccatatccat ctttaaaacg atttggaatt cttataatat
     2521 aatcaaaacc tatatcatcg aaaaattctg ccataataac acaagaaatg attccatcaa
     2581 catcataatc tcctactatg gcgactttct catttttttc tacagcttct ttgatgcgat
     2641 tagctgcttt atatgcatcc tttaaacagc atggcaaagg cagatcacaa agtttggtat
     2701 gcaaatcttt ttcaaagcgt gaagctaaaa tttttttaat ttcattttta ttaattatct
     2761 tcatagttta tagctgcctt gataaaactg caaatcacag gattaacatg ctcaagtctt
     2821 gatgtaaatt ctggatgaaa ctgcacagcc aagaaaaaag gatgacagtt aagctcaact
     2881 gcttcaatca atcctttgct ttcaccactt acaatcaaac cgtgtttttc aaaatctgct
     2941 ctatattttg gatttgcttc ataacggtgg cggtggcgtt cttttacact ttttgcttca
     3001 ttataaacct tagccaaaag ggatttttcc ttgatatcac atttataagc tcctaaacgc
     3061 atagttccgc ctaaaggagt ttttgcagta cgaatttgtt tttctccatt tgtatccata
     3121 aattcatcaa tcaaataaac cacaggattt tggcatttct catcaaattc acttgaattt
     3181 gcatctttaa gttttaatac atttctagca aattccacca aagcaagctg catacccaaa
     3241 caaattccta aaaaaggaat tttattttct cttgcgtatt gaatggcttt tatcttacct
     3301 tctacaccac gatatccaaa tccccctgca actaaaattc cactcacatc tttaaatact
     3361 tcagcacttt ccatattttc aagtttttca ctatctaccc attttaactc cactttagta
     3421 tctagggctg cacctgcatg tataatagct tcagtaaggc ttttataact ttcttttaaa
     3481 tccacatatt tgcctacaaa agcgatttta acttcattgc ttggagctat aactcttttt
     3541 accaaagagt cccaattttc catattaggt tttaaatttt tcaaatccaa aatttcagca
     3601 atagggctta aaatatcttg ctttaaaaaa ttaagtggaa tttgataaat actagccgca
     3661 tcaacacttt ctatcacgca atttttttct accccgcaag aaatagcaat tttatctttt
     3721 aaatctctat caagagcttt ttcactacga caaataatca tatcaggact aatgcctatg
     3781 cgtcttaact cgcctacact atgttgagtt ggctttgttt ttaattcccc tgcagcctta
     3841 ataaaaggta ctagagtaag atgaatattc atagcattat ttttacccac ttccaaacgc
     3901 aaagcacgaa tagcttctaa aaaaggcaag ccttctatat ccccaacagt tccgcctatt
     3961 tcaacgataa gtatatcttt gccttctcct gcttttttaa tgcgatcttt gatttctcct
     4021 actatatgag ggataacttg aatggttttg ccaagatatt ctccacgcct ttctttttca
     4081 atcacacttt gataaacccg tcctgtagtg aagttattat cttgagataa actctcatcc
     4141 aaaaaacgct cataatgccc caaatcaaga tccgtttctg ctccatcatc agttacaaaa
     4201 acctctccat gctcaaaagg actcatagtg cctggatcaa cattgatata aggatcagct
     4261 tttaaaatac tcactttaag ccctgaattt tttaaaagtg ttgcgataga agcagcggct
     4321 atccctttac ccaaagaact taaaactcca cctgttacaa aaatatattt tgtttgtttc
     4381 attgacaata agccttattt ttttatctaa ttatagcttg ataaaacttt ttatttcatt
     4441 agaattttaa gtaaaaaatg caagaattac aaaaaatatt tttatcaaaa aaggaataag
     4501 catgcaaatc actttacttt ttcacactcc attatctgtt tgttctcatg caacaagaac
     4561 ttgttggcaa agctttgaaa aaggcgattg cggtggcgaa aaagataaag aacttatcga
     4621 tcgcgtaggc aacaaattca aacacgcttc aaccttagaa catctaaact atacttttta
     4681 tatacaagga atttcaagag cttgcttaca agaagttgca agacaccgtc acactagtcc
     4741 tagtgtaaaa agcacgcgtt ataccttaaa agaacttcgc aatgaagctg aatttaaaat
     4801 aggagatttt gaaaatgcaa gccgttatct tgtgctttgt ggcaatgaag aggttgataa
     4861 cgcaagcatt aaagccttag aaaatttacg cactatttta caaaaaagca ttagtctaga
     4921 tatagccaaa tactgcttac cagaaagcta taaaactgaa cttacactaa cgattaatgc
     4981 aagaagtttg cagaatttca tttctttgcg tagttcaaaa tcagctcttt gggagattag
     5041 aaatttagca aatgctttat ttgaagcctt gccacaagaa cacaaattta tatttgaaca
     5101 ttgcttacat aaagatatag aataaatcat actaatttta tcttatttaa aatattgtta
     5161 tgctaccatt tataaaatca agctttacgc aagtatattt tcatatacct tgtgcttgat
     5221 tatagtttct tataaggact ttttatggat aaacaatttt ttcaagattt tctaatgctt
     5281 tcacaagctc atactataac tactcttgct atgctttgtg ttgtttttta cgcattaaaa
     5341 aaaatgcggg atataaaaat caatttttct cttcgcatgc tatttgcgct tttaatgggt
     5401 ttggggtttg gttttgcttt gcaatatttg gcaaattttc cagatgctaa agaagcaagt
     5461 aatattcttt ggtatagcga aacaaaacat tggtttgcat ttgtaagttc tgtttttgta
     5521 gcttttataa aaatgctggt tgttcctctt gtaagcattt gcattataaa agtaattata
     5581 gaaattgata aaaatatcaa aatatcctcc ttgcttggaa taagtctttt ttggatactc
     5641 tttagcacag ccatagctgc aaccttgggt atatttttag gttatagttt tgatttagga
     5701 agtaattttg ctatatatga aggaaataaa caaattcgcg aaattcaaac tttttcaaat
     5761 attatactag ggctaatacc tagcaacatc attgcagcta ttaataaaga aaatattata
     5821 gctattgtta ttttttcttt ttttatagga attagtgcta aaaaaatttc taaaaaagaa
     5881 gagtatgaac aagcctttaa aagttttcat aattttatcc taacctttta taatattatg
     5941 atgaacatga ctgctacagt tattagattt atgccttatg ctgtagtttg tatgatggct
     6001 aatgtgcttt taagcaatgg ttttgaagct atcaaaacag ctggactttt tataatgctt
     6061 atttatatag ctatgttaat aatgttcggg gtgcattttt tacttcttgc ttcacaaggg
     6121 ctaaacccta taaaatatgc aaaaaaagca tttcctgtat ggttatttgc atttagctca
     6181 agatcttctt tgggcacttt gcctatgact acttcaactt tgcaaaataa atttggagtt
     6241 aattcagcta tagctaattt tgtagcatct ataggtacaa caacaggact taatggttgt
     6301 gcggggtatt ttccagcttt agcggcagtt tttgtagctt ttgctacaca tacacatatt
     6361 gattttacat ttgctttaat gatagttttg gtagctgtta ttggatcctt gggtatagct
     6421 ggagtacctg gaagtgcaac tatggcagct tctattatgc tagcagggat tggatttggt
     6481 aataattttg tcatgctaag tttgatttta gctatagatc ctattataga tatggcaaga
     6541 acagcaagta atgtctcagg agctatgact tcggcacttt gtactgcaaa aaatctaaaa
     6601 gccctagata aagaaattta caattcttaa tctcttaaaa cccaatattt ttcattgggt
     6661 tttagtattt attggcaacc ttcacattct atgctacgat ctgcaacatt gactttttca
     6721 ctatcagggc tttcacttct taaataataa gtagatttta ctccaagctc ccaagcgagt
     6781 tgataaattt catttaaata tcccccactt gctttatcaa gtgataaaaa gatatttaaa
     6841 ctctgccctt gatcgatcca tttaccacgc acagcagcag cctttacaag aattttttga
     6901 tcaagttcgt aggctggagt atagtattgc caagtatcaa ggcttaaatt tggcacaaca
     6961 acaggtatca taccacttaa attttgttca aaccactttc ttttgtaaac aggttctata
     7021 gtctgcgtag tacccaccaa gatagaaata gaagaagtag gtgcaatggc catcaaataa
     7081 ccatttctca taccatcttt tttaactttt tctctaagtt taacccagtc gcattcactt
     7141 tgatcaaata agccctctct taaagttaaa gctttagcct taggacttgc tacatcaata
     7201 ggaaaaatcc ccttgctcca atttgatcct tcaaaatctt cataagaacc tttttcaaga
     7261 gctaaatttg aactcgcatt aatagcctca aagctaattt gctccataat ctcatcgatt
     7321 ttatttaaat gctcatcgct tccccaatga atcttagcct cagcaagcat ttgtgcctcg
     7381 cccataactc caagacctat ggcacgagat tttaaatttg tatcttttac ttttctatga
     7441 ggataaaaat ttaaatcaat tacattatca agcatacgaa tagctgttgg aacaacacgc
     7501 tctatatctt ctttagtata tactttgcta agatttatac ttgctagatt acaaacggct
     7561 gtttttccat catttttata tttttcaact atataaactt tattaccatc aatgctatct
     7621 aaagttgata tttttttggc tggtttttca tatcccccat cgatcacaac cttttgctct
     7681 tcatcaaaat gaagctcatc tccattttca aaaactactt tgatttgata ataatttggc
     7741 tcggtatttt gaaaaatttc agtacataaa tttgaacttc taataattcc tacatgagca
     7801 tttggatttg ctctgttagc actatcctta aaacataaaa atggcaagcc tgtttcaaaa
     7861 taatttagca aaattttctt ccaaagctct ttagcttcta cgatttcttt ggtaatgctt
     7921 tcatcttttt catattcttc atagcgtttt tcaaaagctt caccatataa atcacacaaa
     7981 tccgccgtat ccgcaggatc aaaaagagtc catttatcat tagctcttac tctcttcata
     8041 aaaagatcat tgatccataa agcagggaaa agttcatgag cacggcgtct ttcttcacct
     8101 gaatttttac gcaaatcaat aaaatcactt atatccatgt gccaaggttc tatataaaca
     8161 gctatagctc cttttctggt tcctagctga tctactgcca cggcaatatc attagtaatt
     8221 ttcaagaaag gtataatccc tcctgcggca tttttatgcc catctatgct tccacccata
     8281 gcacgcactt tagaccaatc ccaacctata ccgccaccaa atttagaaag caaagccatt
     8341 tcttggcaag aatcaaaaat accttcaata ttatcagggg ttgatcctat ataacaagaa
     8401 ctaagctgat ggcgcgttgt tcttgcatta gataaagtcg gagttgcaag catgagttca
     8461 aatttagaaa ttaaatcata aaatttcttc gcccattctt gaggattaaa ttcattctgc
     8521 gctaaaaaca tcgcaatggc cataaacatt tgttgaggaa gttctatagg cataccttta
     8581 ctatctttaa tcaagtatct atcatataaa gttttaatac caagataagt aaattgcata
     8641 tcgcgttcag gtttaatata agcatttaaa tcatctaaat catatttttc tttaagacca
     8701 agtaaaattc ttccttcttt ttcacctttt tcaaaatact cacacaaatg attatagcga
     8761 ttcataccat taactttttt atataaatca aataaaaaaa gtctagctgc aacaaaggtc
     8821 caatttggac aatcaatatc tatcttatct actgcagttt taattaaagt tttttgaatt
     8881 tcttcagttg aaattccatc gcgaaattga atctttgcat cgagttcaag ttcgcttaaa
     8941 ttcacaccct ctaaatcttt tacagcatca gaggtgcatt ttttgatctt ggaaacatcc
     9001 aattcttctg tacgaccatt tcttttaata actttcattg ccttccttgc tttttattta
     9061 aatgttcttt taaaaattgc atcaacattt tttgtatagt agttataatc gaaacatttt
     9121 cttacatcct cttcgctcaa actttttctt aaatcttcat cgcttaaaag cgctaacaaa
     9181 aacaaacttt catttttttc attgatagca gccttgccat tttgcaaatc tgcccaaact
     9241 ttcatagcgt ttctttgaac tattttataa gcttcttcac ggctaatgcc tttaaatgga
     9301 agttctaaaa gcaccctccc tgaaaataca agcccgcctg taagatttaa atttttcatc
     9361 atattttcag gataaaccaa aagcttatca atcaaatttg taagacgcat aagcataaaa
     9421 tcagccgtga taaaagcatc aggcaaaata aatctttcaa cactagaatg agatatatct
     9481 ctttcatgcc aaagtgcaac attttccaaa gctggagtta caaaagatct aagcacacga
     9541 caaagtcctg tgatattttc acttaaaaca ggatttcttt tatgtggcat agctgaactt
     9601 cctttttgtc ctacactaaa atactcctca gcctcataaa cttcagttct ttgaaaatgt
     9661 cttatggcta cagcgatttg ctcacaactt gaagctaaaa tcgcaatagc agaaacaact
     9721 tgagcataac gatctctttg gatcacttga tttgaaacag gagcggcctt aagacctaaa
     9781 tttttacaaa cttcttcttc aaattctaaa ggagcatgag caaaatttcc cattgcaccg
     9841 ctgatttttc catagcttat cacttctttt gcatgttcta aaagctcttt tgcatgcgaa
     9901 atttcatcat accaaatagc taacaccaaa ccaaaagtga taggctctcc atgaattcca
     9961 tgacttcttc ctaccattaa ggtgttttta tgctccaaag cacgcttttt gatcgcttct
    10021 aaaagcaaag aaacatcttc taaaataagc tccaaactct cttttatctg taaagcaaca
    10081 gctgtatcta tacaatcaga gcttgtcatt gcataatgca caaaacgact ctcttctccc
    10141 aaactttcac ttacacttgt aagaaaagct ataacatcat gttttgtggt tttttctatc
    10201 tcatctattc ttgcaatatc aaattttgca tttttaagaa ttttttcgca gtctgtgtca
    10261 tcaatgagac cgagtttatt ccaagctttt acagcggcta attctacttt taaccacgca
    10321 tcgtattttg cttgcatgtc ccatttttta gccatgattt ctctgctata tctttcaacc
    10381 atctttgaaa cctttttagc tataatttta tattttaaaa aacagaaatt atatcaaatt
    10441 atcctaagaa agttattaaa tggcctacat aaaaataaaa ctctcaaaca atggaaaaaa
    10501 ggcgtttcaa gtccttatgg aaaatttaaa aattagcata aatgaagcac aaaaactcat
    10561 agacaaaaaa agactttttt gtgatggaat tttagtagaa gaaaagaata aaattttaaa
    10621 tggtttagta gagcttatag tctatgaaaa caatcccaaa ggagtagaaa ttgtctttga
    10681 aaatgaagac tttgccatac ttgaaaaaga aagtgggatc ttaagtcatc caaatggtag
    10741 acattgtaaa tacagtctta gtgatgaaat ttggcatctt tggggaaaag aagcttgcgt
    10801 agcacacaga cttgataaag aaacgagcgg acttatactt gtagccaaaa ataaaaaagc
    10861 tcaaattgat cttaaagctt tgtttgaaaa aaaactagtt caaaaagaat accttgctct
    10921 agctaacgga aaaatagaag aaaattttat aattgataaa gccataaatt tagccaaaaa
    10981 ctacgatgat gtaaaaacaa ggatgcaaat ttgcaaggaa ggaaaacaag ctatcactga
    11041 gtttgaaatt ttagaatact ttcctaaaat caacgctact cttttactct gcaaaccctt
    11101 aacaggcaga caacaccaaa taagagtgca tttacactat aaaaaccata ccattttagg
    11161 cgatccactt tatgggctta gcaaagaaca aatcgaaagt attttagatg aaaaattaac
    11221 ccccaaagaa cgcttaaaac ttacaggtgc cttgcgtttg tgtttgcatt cttatcgttt
    11281 gaaatttcaa tataaaaatc aaaattttaa tatcaactca aaaataaaca taaaagaaat
    11341 tttcaacaat tctataaaat aaaatgatgt ttcactacgc tacaatcaat cacttttcta
    11401 ccaaatttta aaacaaaaaa ataattcttg ctaaaacttt aagtataatt aaataaaaaa
    11461 gcgagatttt ccaaatgaaa tttgttaatt ttatacaggg tcaaaaaccc aatctaggag
    11521 tactaaattc tagtggaaaa attgtaagtt ttgatgatct tggcattgaa actaacgata
    11581 tgaatgaatt tattatccat tttgataaat ttaaacacaa acttacagac ttggattcta
    11641 aaatagccta tgaaattcca caagaaaatt atctagcccc tattatagaa cctcgtcaag
    11701 atattatatg tcttgggatt aattttttag atcatgccaa agaatctgcc aaatttaagg
    11761 gtgaaaaatt tgaagaaaga gaatatcctg tatattttgg aaaacgttgc aatcaagcta
    11821 cgccaccttt tggcgatata cctttacatg cagatgtaac ttctcagctt gattatgaat
    11881 gtgagcttgc atttatttta agtaaagatg cttataaaat caaagctaaa gatgcaaaag
    11941 attatatctt tggctatact attatcaatg aaatttcagc tcgcgaactt caaaaacgcc
    12001 acaaacaatt ctaccgagca aaaagtcttg aaggtagcac tataatggga ccttatatca
    12061 caagcgtaga tgaaatttct tatcctccta aactccaact tcaaagctat gtcaatgatg
    12121 aactacgcca aaactctaac actcaattgt ttatttttga tattgcttat gtcttagaag
    12181 aacttagtgc aggcatgctt ttaaaagctg gaagtattat atctatggga actcctagtg
    12241 gagtaggtat ggggttaaat ccacctactt ttttaaaatc aggagataaa gtacgttgcg
    12301 ttatagaaaa tttaggagaa ctttgcaata aaataaaaaa tatcaattat taaataattt
    12361 actaaaatta tactataatg gcattttaaa aacttaaatt aaggcagaaa tttatcatga
    12421 aaaaaataat aatgatttta tgtttatctt atgcaaatat agtctttgca gtagatatga
    12481 taacccctat tccaaattcc atctcttatg ataaagaaaa agctgaactt ggaaaaagtc
    12541 tttatatgga taaaagttta tctaaagatg gaaaagtttc gtgcaatact tgccataggc
    12601 ttgatcgaca cggtgttgat gggcttgaat tttcaatagg agttgataat caactcgata
    12661 aaccctttaa cactcctaca acctttaatt ctgtgtttaa ttttgtgcaa ttttggaatg
    12721 gcagagctaa agatttaaca gaacaagcta tgggaccttt tttcaatcca aaagaaatgg
    12781 ggctaagtcc tgaacttctt ttacaaaaag ttaattcaaa tgaaaattat gtaaaaactt
    12841 ttaaaaaact ttatggagaa gttacagtag aaaacatagc ccttgcaatt gctgaatttg
    12901 aaaaaacctt aatcacccca aattctcctt ttgatcgcta tcttagcggg gatcaaaatg
    12961 ctatttcagc tcaagctaaa aaaggctatg aagattttaa agctaatggt tgcatttctt
    13021 gtcatcaagg tcaaaatata ggtgggaata tgtttcaaaa aatcggtatt tttgaagaat
    13081 acccaaacca agaagattta gggcgctatg aaatcacaaa aagagaagct gataaaatgg
    13141 tatttaaagt tcctagtctt agaaatatag ccaaaaccgc gccttatttt catgatggtt
    13201 ctatacctac tttagatgct tgtgttcagt ttatggctta ctatcaacta ggaaaatttt
    13261 tagatcaaga aacagttgac aatatagttg cattcttaga aagcttaaca ggagaatatc
    13321 atgacaaata aaaaaagttc atttttgata aaatttatta tcttatctac actagttttg
    13381 actttcattc ttgttttatt agctattatt tttaataact attcttcatc taaagacaat
    13441 aaagacttga taaacatagt tcagcaacta gaaatttcag atgaaaaaat caattctatt
    13501 tttcaaaata gttttaattt tatcaactat gacccaagtg tgcaagcgat aaaaaaaatg
    13561 caagaaaact ttgcaaaact taaaactttt gggattgaca taagcaaagc agaagaaatt
    13621 tttaatgcca aactaattca gcttaattat tttaaatccg caaattccat agcagtaaat
    13681 tcaaaacttt atttatttga actagctaaa aattattttg aagaattgga acaaaaccat
    13741 gaaacaaata aaaacaacta taaaacaatg aactccatgt taagcgttct ttcaactgaa
    13801 agtattttac aaaaaacaac attaaatcaa ctcaacagtc ttatgaaaga aatcaaaaat
    13861 gatgcaaaaa atgaaaattt gcaacttttt ttaaaacact ataaaatgat tgtaaagcaa
    13921 atttctatta tgcaagataa ttcttctatt tatgaaaata attcccttat gaaagagtta
    13981 aaacaacttg acacttttac ccaaaatact atagaacaat ctaatttatt taaattttat
    14041 atcgctttgg cagtatttgg aattactatc gtattatttg tattttttat tttattaaca
    14101 ctaaaaaaag tcatcatacc aattcatact ttagaaaaac taagtgctaa tttagctagc
    14161 aaagaagcca atctacattc tcgtttaaac atagatccaa aaagcgagct tggacaaagc
    14221 gctcaatata ttaattcatt tatatccacc gttcaaaact cgatcataga agccatagaa
    14281 aatgctaaat caagtcatca aaattcacaa aaactcaaaa acaattctat gatgcttgaa
    14341 aacagttcta attctcaaca tgaacaaatt caaggagtta aagaaatcac tcatgtttta
    14401 gatgatcata tcaatcttgc gggaaattta gcacaagaaa gtatagaaaa tatgcaagat
    14461 atgcacatac taatggataa agtagaactt actctatctg aacttgtaaa tttgataaat
    14521 gaaaacaatg aaaaagaaca aaatgtagta gccaatatgg atagtctaac ccaaagtgcg
    14581 gataatatta tagaaatcac aaattccatt aaagatatag ctgatcaaac taatttactt
    14641 gctctaaatg cagctatcga agctgcaaga gcaggcgaac atgggcgtgg atttgctgtt
    14701 gtagccgatg aagttggaca acttgctgat aaaacaagca aatctctttt aaatatcaat
    14761 gctactgtta atactatagt ccaacaaatc aatgacaaca aagccttaat ggatcttatc
    14821 catgattcta tgaaagaaac ctcttcaaaa accaatgatt tacaacaaga acttgtaaat
    14881 tctatgcata aattggaaag ctctatagaa tcaacccaaa ccatgaaaga taaaagcatg
    14941 gaagtaaaag ataaaatgct tatcctagga acaaatatag acaaagttaa cgaacttgca
    15001 aattctgtta aagatttatc atgcgaaatc aataatatct ctcaaaatgt tctaaatggt
    15061 gcctctaaac tctccgaaaa attaagtagc tttcagtaac ttttttcacg ttaatttaac
    15121 ttaacgtgaa atttcaataa aaattttatt tttaatttat gtttttcaag taaaattagc
    15181 agtttttatt tcaaaggaga tgctatggag tttcttgaac ttttattagt tttaatcgcc
    15241 ttgatactga ttatcaaaaa accagaaaaa gaaaatttgg cttttggttt ggtaatggta
    15301 gcttggcttt taatggtttt tttctatgtt ggccacaaaa caggcgcact attaacaata
    15361 atgaatctgt aaggaagggc taaatgaacg aaatcaataa aacaaaaaat ttctacacac
    15421 taatgtgttt agcaggcttt ttgattatac tcttgcctgt aggtattgca aatttgatat
    15481 ttggttatat gttgggcgat agtccttgca cgctttgctg gggacaaaga gaagcaatga
    15541 tctttatcgg tgtaatggcg cttttcattg ttcgttatgg tatgaaaggt aaataccttg
    15601 ccgctctttt aatcatgaca gcagtaggac tttatcaatc ttttgctcac tatggtaatc
    15661 acgctcatag agatttagat caaggttttg gtttagcagt ttttggtatc catacttatt
    15721 tttgggctga agtagtattt tgggctgttg tattgctctt aggtgtgatt tttgcttttg
    15781 ctcctaaatt taatgctttt gaagctgaac taaatggaga aaagtttaga aaatatacta
    15841 aatttagctt tgcagcagtt ttaatcagtg ctatcatcgt agcatcaaat gttttccaag
    15901 cctttgttag cacaggtatt cctccttatg taggacaagg cgatcctgta agatttagtt
    15961 taaatccaaa atacatcatt tggagtaaag aaggttggaa tggtttatgg caaaatattt
    16021 ctttcttagg aaaacgcgat gttaaagctc ctgattatgc ttttgcacct gcaagtgaaa
    16081 aacttggcat aaaatttgat aatgatatca acaatgctcc atttgcaaaa atcaatgatg
    16141 agcttaaaat cacaaatgaa caaaccataa attttgacaa agccatcaat actcttgatt
    16201 atatcaataa cgaatttgta gcaagttcta aatgggatgt agctttctta gataataatt
    16261 ttagcgttaa agaaggtttt gaacttgatc cttatttttc agcttctatc gatccaatca
    16321 tcggtatcat accttatatg aacgataaat tcattcttat gggctcaaac aaatctttct
    16381 taagatttgc aaaaaatcct aatgcaagtg aagaagatat cgctaaacaa tacgctgact
    16441 ttgtaaaagg taatgataaa tttaaaggcc aaggcgaagg tttaggtcgt ggaagacttg
    16501 atactgtaag agcgaaattt aaccatgtag caagtatgac tacagatgga aattatcttt
    16561 atcttgcaac tgttccaaac aacaaagacg ctaaaacttt tgtaatctct aaagtttctt
    16621 taaaagatcg tgttctttca ggagaattta ctccaaaagc aaatcttaaa gaaggtaaaa
    16681 ctttaggcga tctttatgta acttctatga cttttaaaga tggggaaatt tatgcactta
    16741 gcaaaaatca caatgtgatt gccgtaattg atccagtcaa agaagaagta gtaaaaacca
    16801 tcgctttccc aagctctatc actaatgcta gaagcatttt ctttaaagat ggaaaaatca
    16861 atattctttc ttatcaagat ggagcaaaca agctttatac tttaaactaa gctttaagtc
    16921 ctagtgaaaa ctaggactta tatttgatct tatctttaaa ccctgctttt tcaaaacccc
    16981 ttaaacgaag caaacaacta tcacacttcc cacaagcttc atcttcactc tcatagcaag
    17041 accaagtaag ttctaaaggt acattttctt ttaaggctag ttctacaatt ttagctttgt
    17101 tcagtctaac aagcggggtt tttatacaaa ctttgaaatt cttactcgta ccttcattga
    17161 taaattcttg tgccttttgt ataaactcat cagtacagtc aggataacca ctgccatctt
    17221 cttctaccac ccctataaaa atactctcac aattttcctt ttcagccaaa gatcctgcta
    17281 tgcttaagaa aattccattg cgaaaaggca cataagtgat aggtggagta tcgcttatgc
    17341 aaagctcatt tttagggata tctatacttt tatcagttaa ggcattgccc cctatatctt
    17401 tgataaaact cacatctaaa atataagatt tttctacttt taaagccttg caaatttgct
    17461 taaaacattc tctttctttc tcttgggtgc gttgttcata gtcaaaatgc aaagcgatga
    17521 tttcataacc ttcttttttg gctagataag cacacaaagt gctatccata ccaccactta
    17581 taatacaaag tgctttttta ctcattttta tccttaaatt tgctataatt tcgcaatttt
    17641 aacgaaaatt tttaaattta aattgcaaaa aaggcaaaag catgataaac ataaaactca
    17701 tagaacacat ttttaaagcc gcttctatca gtcgttggaa tgattatcca agaatggcaa
    17761 atttggttga acttgacaaa caagctcata aattcatcat tgcatatttt atcgctaaaa
    17821 tggaaaaaga tgtggatatg agagtgatta tagaaggggg aatttttgag tttttaagtc
    17881 gtgtggtagt aaccgatata cgccctgatg tatatcatga aatcgtgcgt caaaaaaaag
    17941 ctgaagttaa tgcttgggtt ttaagcaaaa tcgaacctat gatagaagat atagaagatg
    18001 gggaatttct aaagcgtttt gaagcgtatt taaacggcaa tgcttacgct aaagaaaagc
    18061 ttatcttaaa agcggcttcg tattttgcta caagatggga atttaacata gtttatcaaa
    18121 cctcagcttt tttaaatgat attgatgaga ttaaaaacaa agttgaagaa gaattagaag
    18181 attactatga gcttatagga gctagaaaaa tcgctttaaa tcaaaaaatt gcaaaaatca
    18241 tcgatcttag cggaagactt cgctttcaaa agcgttgggc tcaaactcca cgcataccag
    18301 aaaccgcggt tttaggacat atgcttgtgg tggcgatttt aggatatttt tactcactaa
    18361 aaataaaggc ttgtgataaa agacttgaga ataattttta ttgtgcttta tttcatgatt
    18421 tgccagagtc tttaacgcgt gatattatca gccctgtaaa atacggcatt gatgggcttc
    18481 atgatattat aaatgattat gaaatgaaac ttattaatga aaaaatttta ccctttgtac
    18541 ctgagggttt aaggggtgag ttttcttata ttttaggcat tagagaaggt agaaacggtg
    18601 agtcaaattt tgtaaaaaat gagtttgaaa accgcactta taaaaatgct aaaatagagc
    18661 tttgtagcgg aagtttaagt tcttttaatg aaaatgaatt tggtgctata gatggtaagg
    18721 tgcttaaata ctgcgataaa atcgccgctt atatagaagc aggacttagt ataagttatg
    18781 gtgtaaagtc taaagaactt gaaagtggtt ttttaggaat gcatgagttt tttaaagaaa
    18841 atcctactat agatggggta aatttttttg aaatttgtga aagtttaaga gagtatttta
    18901 aaatttaaat aagattttta tacttctatt ttcaatatgt tttaaataaa aatattataa
    18961 tttcaaattt tattttgtat aaaacataaa ggagttatta tgaaaaaata ctttcaaaag
    19021 cactatactt tagccttttt tataggtata ttagcgggta ttttcggagc tattgttaaa
    19081 tggggttggg aagtaccttt tcctccaaga aatcccaatg ttttttggcc agcagatgct
    19141 ttagaacgtg ttactccacc taaaattttt ctagaacaac taggcttacc tactgaaagg
    19201 tgcagttttt ggattttttg tttatctttt tgcccatgtt attgtaatgc ctttaattgc
    19261 agaagttcca ccactttgtg aaattccttt tgatgaacac ctgtctgaaa tttttggaca
    19321 tattgtttgg ctgtggggca tggaaatagt tcgtagagat ataagaaatc gtataaccaa
    19381 agaaatagaa gaatgaaagg tttcctttca ttccatatcc aaaaccgcac ctttactagc
    19441 attgctaaca agtttttgat acattctaag ccatcttgaa ggcacttctt tttgaggcaa
    19501 tacaaattct tttttgcgtt gagtgatttc ttcttcgctt aaatttgcat ggatggtata
    19561 agcatctaca tcaatttcta tttcatctcc atcttttaaa agtcctataa gaccaccttc
    19621 agctgcttca ggggaaatat gacctacgct taaacccctt gtagccccgc taaaacgacc
    19681 atcggtgatt aaagctacat cagcacccaa acccataccc attaaaagtg aagtaggact
    19741 taacatttct tgcataccag ggccaccttt tggaccttca tagcgtatca cacaaacatt
    19801 tccttttttc accttgcctt tgataatgcc ttttatagct tcatcttgag agttaaaaca
    19861 aacagctttg cctttaaatt ttctttctcc gattattcct gcggttttta taacacaacc
    19921 ttgctcagct aaatttccaa acaaaatagc aagtccacct acttttgagt aagcattgtc
    19981 tactttgcga atgatatttt catctttgat tttagcattt tttaagcgtt cttcgagact
    20041 ttctcctgtg atagtcagtg catcaagttc taaaatatgt ccttgtctgc ttgaaatttc
    20101 agccataact gcactcacac cacctgcttt gtggatatca tccatataaa cactatttag
    20161 cgacggggct atttttgcta tgtgtgcaac tttacttgag atgaaattta aatctttaat
    20221 atctagtgcc acccctgctt cacgcgaaat ggcaagcatg tgtaaaacag tattgctact
    20281 tccacccatt gccatatcta ctaccatagc attacgcacg gctttttgag tgatgatatt
    20341 gcgaatttta aaacgctcat ctaaggcgat ttcacaaata cgacgcgctg cttttcttaa
    20401 aagctcttct ctttctttgc ttaaagctaa gatggttcca ttaccttcta gtgctatacc
    20461 catagcttcg cataaggtat tcatagaatt tgctgtaaac attcccgagc aagatccacc
    20521 acttggacag gctgaacatt ctatatcttt aaattcttct tcgctaattt ttttggcttc
    20581 ataagcccct acagcttcaa aaacagagct aagactaatc ttttctcctt ttttagttac
    20641 ccctgaagcc ataggcccac cacttacaaa aatggttgga acatttactc ttaaagctcc
    20701 cattaacata ccaggagtga ttttatcgca gtttgggatg cagattaaag catcaagttg
    20761 atgagcattc atcactgttt caatggaatt tgcgatgatt tcacgacttg gtaaagaata
    20821 aagcatacct tcatgtccca tagctatacc atcatctaca cctatggtat taaactcaaa
    20881 aggcacacaa ccatttttgc atatctcatc tttaatgatt ttagcataat catttaaaaa
    20941 ataatgtcct gggattatat ctatatagct atttgctaca cctataaaag gtttgtcaaa
    21001 atcttcatct ttcaaaccac aagcacgaag taaagaacga ttaggtgctt ttaaatgtcc
    21061 tttttttatc gcatcgcttc tcattgtaac tcctgataat aattttttaa aattatattt
    21121 agcaaagctt aatttttatg aaatttattt tgatatacat tttcataaat gataaaaatt
    21181 attaattgac aaaaatattt ttttataata caatgctttt tgataatcaa aaaaggagtc
    21241 aaaatgagac aatatgaaac ctataaatgc caaaaatgtg gtaatgaagt agaagttcaa
    21301 aatgtaggtg gaggtaagct tagttgttgt ggtgaagaaa tgaaatgtat cactacagat
    21361 ttaactgcag taaatttgat gaaagctttt gcgggcgaat ctatggcgag aaacaaatac
    21421 gatttatttg ctgatgtagc tgaagaagaa ggttggcatg cggttgctag acattttaga
    21481 gaagcggctg aaaatgaaaa atggcatgca agagcagaat ttaaagctta tcatgaaatc
    21541 gttgatggca aacctttaga agtaactaca aaaaacctag taactgctgc agaaggtgaa
    21601 aactatgagc acacaactat gtatccaaat tttgcaaaaa tcgctgaaga tgaaggtaaa
    21661 aaggctatag cgagattatt tacagctatt ggtaaagtag aaatcgaaca cgaaagagaa
    21721 tatctagcgc ttaaaaaaat gctcgaagaa gaagaatttt ttaatagtga agtagaagaa
    21781 ttatgggttt gtgaagtatg cggacatata catcgtggca aaaaagctcc agcagcctgt
    21841 cctttatgta aagcaccaaa agagtatttt aaacgcgaat ttttgggtta agttaagaaa
    21901 ttcttatcct ttttaagata atattataat tattttttaa taaaaggata agaaaatgaa
    21961 aaaattacta tttttatttt ttgctttaac ggcttttctc tttggtgctg taaatatcaa
    22021 cactgcaaca ctaaaagaat taaaaagttt aaatggtatt ggcgaagcta aggctaaagc
    22081 gattttagaa taccgcaaag aagcaaattt tacaagtatt gatgatctta aaaaagttaa
    22141 aggcataggt gataagcttt ttgaaaaaat caaaaatgat atcacagtag aataaaaggg
    22201 catttttgcc cttcttttta gaaaaatttt gaaaacttta tttgacacaa aagaactttt
    22261 aaatgaattt gatataaatt taatcggtat tgatgaagca ggacgcggtg ctttagcagg
    22321 ccctatgatg atggcggctt gcaaactgaa caaaaaactt gatgggttgt gtgattctaa
    22381 aaaactaagc gaaaaaaaac gcgaagaact ttatgaaatc atcatcaaaa attcaaacta
    22441 tctcatactt gctttttctt cagaacaaat cgacgcacta ggcttaagca cttgtttaaa
    22501 aacgggctta aagcttataa aaaagcattt taaagcagaa aataacttct tatatgatgg
    22561 aaacaccaac ctaggtataa acgggataaa aacacaaatc aaagccgata ctagcatttt
    22621 gcaagtaagt gcagctagca tacttgcaaa agttagtaaa gatagggtga tgaatttctt
    22681 agctaaagac tttccttgtt atgaatttga aaaaaacaaa gcctatggca caaaagccca
    22741 caaagaagtt atagctaaat ttggaatttg caaactccac cgaaaaagtt ttaaactttt
    22801 atgattattt tgctaaattt tgatgcaaac tcaaagcaca ttctatacca tcttttatag
    22861 cccaaacaac taaagattgt ccttttctag catctccgca agcaaagatt tttttatgag
    22921 tggtttggaa attttctgtg cttatgttgt ttttctcatc taatttcact ccaaaatttt
    22981 tagcgatagc ttcttcgcac ccgctaaaac ccatagccaa aagtactaaa tctactttat
    23041 aagttttttt agaatttgga atttcaacat ttatagcctt gccttcttta aactcgcgtt
    23101 ttaaatcatt tgcttcaacg ccttctacat gagtttttcc taaaaatttc tttgtcattt
    23161 tttgatattc tctaggatct ttgccatata cagcaatggc ttcttctaaa ccataatcag
    23221 tagtaaaaat gtcagctttt aaaggccaag gattgttttg gcttctttgc aaaggtcttt
    23281 ttggacttct ttcaaaacgc actatagatt tagccccttg tcttgtcgcc acagcgatac
    23341 aatccacact tgtatcccca cttcctataa ccaagacatt tttacctttg gctgcatctg
    23401 cacccttgcc tgtttttaac aaagttttgg tattttgcgt taaaaaatca agggcaaatt
    23461 caaccccttt tagctttcta ccttctatat caagatctat aggcttgctt gctcctgtgc
    23521 aaagcaccaa agcatcaaat tcttttagaa gttttgaaac cttatctttg ctgtctatat
    23581 tttcattcac tttaaattca atcccgcttt ttttaagcaa atccacccgt ctatcaacta
    23641 tacttttatc aagcttcata tcagggatac catacatcaa aagtccgcct attttatcgc
    23701 ttctttcaaa aacacttact ttataaccta gcgaatttaa agtgttagca caagcaagcc
    23761 cagcaggccc acttcctatg atagcgattt ttttgccatt gtattgctta ggtttattta
    23821 ctcttactaa attttcttta aaagcatttt ctatgatgga taattcatta tttttgatac
    23881 tcacacttgt gccatttatc gcacacacac aagaatcctc acaaggagca gggcaaacac
    23941 gaccggtaaa ttcaggaaaa ggattggtaa gatcaagtct ttcataagct tcttcccata
    24001 aagaacgata aataagatcg ttccattcag gaatgagatt gtttaaagga cagcctacat
    24061 cttttccttc gctcatcaca cccgtatgac aaaaggccac accacaatcc atacatcgtc
    24121 cgccctgaat ttcttgttct tttttatcca aaggtatagt aaattctttg taatttaaaa
    24181 ccctttcctt aggagcaatt tttttaaaat ccattctttt aaaatctaaa aaacctcttg
    24241 catttcccat ttttactcct tatttttgtg tgattttcaa aaatgctgct aaatttggat
    24301 ctttttcatt tttacaaaga tcaagcattt ttaacatctt ttcataatct cttggcgtga
    24361 ctttaaaaaa gtctttttta tcgaattttt ctaaaatatc tttagccttt ttagaatctg
    24421 tataagtgat atgtttttct atcacagctt ttaattcttt ttcatcctta gcattaagat
    24481 ctttaatatc cacaagctcg gtatttacat gagcttcatt gtgtcttcca aagatataaa
    24541 caacgccccc actcatacca gcagcgaaat tcgcacccac atctccaaga actacaactt
    24601 gtccacctgt catatattca caaccatgca cgcctgttcc taaaaccaca gccaaagccc
    24661 ctgaatttct tacacaaaat ctttcccctg ctataccatc taaatacact tcaccttttg
    24721 tagctccgta taaacaagca tttcctgcga tgatattttc ttcaggtgaa aaagtggctt
    24781 catttgaaat ttttgctatg attttaccac cacttaaacc cttgcctaaa taatcattgc
    24841 tatcgcctat aatctcaagt ttaataccct ttaacaaaaa cgctccaaag ctattgcctg
    24901 cattgcctat agctttgata tggatactat cttcatctaa agcatctttt ccataagttt
    24961 ttaaaatttc acttgaaagc atagttgcaa aagtacgact ttgatttcct acttctaaag
    25021 aaagtttgat aggctctttt ttctccacag catttttaca aagtggtagt aaaattctat
    25081 aatcaatcgt tttttcaagt ttattgtctt tataatcttt aaaatgcaca gcggttctat
    25141 tataagtagg caaggatttt aaaattttat ctaaatttag ctttcctgct ttaccttgca
    25201 cacttttttg gcggagttta tccacgcgac ctatcatatc atctaggcgt tcaaaaccaa
    25261 gccttgccat gtattctcta agctcctcag ctataaaata catgaaatta atcacatcat
    25321 ctactttgcc tttgaaacga tctctaagtt ctgtatcttg agtggctata ccaaaaggac
    25381 aggtatttag atgacaaact ctcatcattg tacaacctaa aacaatcaaa ggcgcggttg
    25441 caaaaccaaa ttcttcagct cctaaaagtg ctgctatggc taaatcacgc ccattcataa
    25501 gctttccatc agtttctaat cttaccctat ctctaagctt atttaagatc aaagtttgat
    25561 gcgtttcagc taagcctaac tcccaaggaa ttccagcatg cggtatagaa gttctaggac
    25621 ttgcacccgt acctccatca taacctgaaa caaggattaa attcgcacct gccttagcca
    25681 cacctgcagc aaccgttcct atgccatttt cgcttacaag ttttactgaa attttagcgt
    25741 ctttgttcgc atgttttaaa tcataaatga gttgagccaa atcctcaata gaataaatat
    25801 catgatgagg aggtggagaa atcagcgtca cacctgcagt agaatgtcta gccttagcta
    25861 tccaaggata gactttaaag cccattaatt gtccgccctc acctggtttt gcaccttgag
    25921 cgactttgat ttgaatttct tttgcatgac ttaagtagtt taaatccacg ccaaaacgcc
    25981 cacttgctac ttgcttaatg gctgagtttt tatccacacc ctctttgatt tcatagcgtt
    26041 cttcatcctc accaccttca cctgaatttg atttagcacc tattttattc atagcctgtg
    26101 ctaaacactc gtgtgcttct ttagaaatag aaccataact catcgcccct gttctaaagc
    26161 gtttaactat actttctaca ctttcaacct tatctatact gatagcttca ctaaaatcaa
    26221 attccatcaa agaacgcaaa ttaacttgtt tttcatctac taaagccgag tattttttaa
    26281 agcttttata gtctttgttg cgacaggctt gctgaagatt aaaaatcaca agcggatcga
    26341 ttaaatgttc ttctttagca cttctaaaac catgaattcc tttagaatct aaagccttat
    26401 gtgtatcgtt aaaagcatgt ttgtgtaaag caatgagttc tttttcaaaa tcttctaaat
    26461 ccataccttc aatgcgtgaa gttgtagaag tgaagtattt atcaatcacc ttagagctta
    26521 agcccagaca ttcaaaaagt gcagagccat tataactttg caaggtagaa acccccattt
    26581 tagaagcaat tttgactata ccacttgaac ttgccttgat gaaattttct accgcctttt
    26641 cataacttaa atttaaatct ttattggcaa tgagtttttg tatgctctca taaaccaaat
    26701 aaggattaat aacagtcgca ccataaccta aaagacatgc aaaatgatga atttctctag
    26761 gttcaccact ttcgataata agacttgtgt gtgttcttaa attttttctt actagatgat
    26821 tatgcactcc agaaacagca agcaaagcgg ggatataagc gtttttttca tccactcctt
    26881 tatcgcttaa aatgataata gaaacacctt ttttaacctc atcttctatc ttaacgcaaa
    26941 gttcatctaa agccttttct aaagtttttt tagaataatc ataaagtata gaaaattctt
    27001 taacttgaaa tttatttaaa gccttaactt caaaaagttc ttcattgctt atcacaggca
    27061 aggctatttt tacgcgtttt gcattgtttt catcgggttt taataaattg ccttcgcttc
    27121 ctagataaat ccttgtagaa gtaacgatct cttctcttat ggcatcaaga ggaggattag
    27181 ttacttgtgc aaaaagttgt ttaaaataat tatacaaagg ttgataagtt ttagaaagta
    27241 tagccaaagg agtatctaca cccatagctg ctatagcttc tttaccattt tgagccatag
    27301 cagccacact cattttaagc tcatcataac tccaaccaaa agctttttgg agttttaaaa
    27361 cctcatcttc ttttaaaaac tgatgtttat aaactccgct tttttgtttt tcaagttcaa
    27421 ctaaattttt aagccatttt ttataaggct tagcattagc ataatgctct ttgatttcat
    27481 tatcagctat aaccctacct cttgctgtat caacgagtaa aagttttcca ggttctaagc
    27541 gttttttggc tttgatattt ttttcatcaa gttttaaagc ccctgtttca cttgaaagta
    27601 tgagcatatc atcttttgta agataatacc ttgaaggacg aaaaccattt ctatccaaac
    27661 tcgcccccat aatcactcca tcagtaaaaa ctatagcagc aggcccatcc caaggctcca
    27721 tcaataaaga atgatattca taaaaagcac gctttttgct ttccatattt tcatttttat
    27781 gccaaggttc tggcaccatc atcataaaag cttcttctaa agtacgacca tttagagcta
    27841 aaaattctaa agtattatca aacattgcag aatcactgct aggcttagct atgatgggaa
    27901 aaatttcatc taaattttca aaatactcac tttgcatcaa accttctcta gctcttatac
    27961 tatcaacatt tccgcgtatg gtattaatct ctccattatg taccatatag cggtttgggt
    28021 gggctctttc ccaacttgga aaggtattag tcgaaaagcg agaatgcact aaagcaatgg
    28081 ctgatttcat attaacatct ttaaaatcga gataaaaatc gctcaattga gttgaaagaa
    28141 gcattccttt ataaactata gtacgtgaag aaaaacttga aaaataaaat tttggcacat
    28201 taatagctct tttttctatg agacgacgtg tgctataaag cactctttca aactcaagcc
    28261 ctgcacttat tttacttggt tttttcacaa aggcttgtaa aaaataaggc atagctttta
    28321 aagcacttgc acctatatcg ctaggattaa aaggcacttc tctaaaacct aaaaattcaa
    28381 gttttttatc ctttaaacct tgtaaaaata tctcttttgc ttcttctttt gcatcagtat
    28441 tgggtgataa aaacatctgt gctacggcat aatcaccctt tttaggaagt tcaaaaccca
    28501 attcttgagt tttaaaaaaa tcatgtggaa tttggattaa aatccccgcc ccatcacctg
    28561 aattttcttc agctcctgca ccacctcggt gttcaagatt catcaaaatt tctaaagcat
    28621 cacaaataac cttataagaa gcaataccgc gtatattagc aactgcagcg ataccacagg
    28681 catcgtgttc gttctttggg tgatataaac ctatgctttg attattttct aggatatttt
    28741 ctaaatccat tttgctctcc ttataagact gatttaaatt ttgttagctt tataaggatt
    28801 atagcataca tttttttaaa atcgatat
//
LOCUS       DAPIVO010000014        27464 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.014, whole genome shotgun sequence.
ACCESSION   DAPIVO010000014 DAPIVO010000000
VERSION     DAPIVO010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 27464)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27464)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27464
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.014"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..183)
                     /locus_tag="RJ239_000590"
     CDS             complement(<1..183)
                     /locus_tag="RJ239_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HDV7330726.1"
                     /translation="MIYENDLIYIEKEEAQVPWLKIFTKEIYKEFSDCPLELQKELFE
                     KILFCEKAMIEFYKPEK"
     gene            291..995
                     /locus_tag="RJ239_000591"
     CDS             291..995
                     /locus_tag="RJ239_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330727.1"
                     /translation="MQISSSYNSYDYYSSKPSFDKTNQSDSTQKDEKNLSENKDDKEK
                     NGEQTQMVNGVELSQKEVAQVRELQSIDRNVKAHEAAHQAAGGGLAGAASFTYTRGPD
                     NQMYATAGEVPISMQKGNTPEETIANARQIAAAAMAPADPSPQDYKVAANATKMEFEA
                     RAEAMKLKAEEAKEKEEENKEKDDKNSENSLEKTDKDSKNNDKNSNFDKDFKNLVTRT
                     YQQNSQNNDIKFSIAS"
     gene            complement(1073..1265)
                     /locus_tag="RJ239_000592"
                     /pseudo
     CDS             complement(1073..1265)
                     /locus_tag="RJ239_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857465.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1554..3275)
                     /locus_tag="RJ239_000593"
     CDS             complement(1554..3275)
                     /locus_tag="RJ239_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HDV7330728.1"
                     /translation="MAEVLKKVDVVTVGAGWTGGIVAAELTKAGLNVLSLERGHMQST
                     ENFNYIHDEWRYGINYGLMQDCSKDTVTFRHDPSGLALPYRKMGSFLLGNNVGGAGVH
                     WNGWTFRFMPYDFEIQTLSKQRYGNKLGNDYTLQDWGVTYKDMEPYYDRFEKTCGVSG
                     EPNPLAEKMGAFRSSPYPQEPLENTKMLKRFESAAKSSNLHTYRLPASNSKGGYTNPD
                     GQDLAPCQYCAYCERFGCEYGAKASPLNTVIPKAMSTGKYTIRTYSNVTQILKKDGKV
                     TGVKFVDTRTMKEYIQPADIVVLTSYMFNNAKLLMVSNIGEQYDPKTGKGTLGRNYCY
                     QMNMGTTAFFDEQFNTFMGSGALGTTSDDFNGDNFDHSKEKFLHGAMIYSVQLGTRPI
                     QSAPLPAGAPTWGAEFKKALNYNFTRAITVGGQGASLPHKNNYLSLDPTYKDAFGMPL
                     LRLTYNFTDQDRALHKFITDKTAEVAKRMQGVKSIKKGAYLKDYSVVPYQSTHNTGGT
                     TMGADRETSVVNTYLQHWDADNLFVVGAGNFQHNSGYNPTDTVGALAYRCAEGILKYH
                     KSGKSLA"
     gene            complement(3277..4005)
                     /locus_tag="RJ239_000594"
     CDS             complement(3277..4005)
                     /locus_tag="RJ239_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HDV7330729.1"
                     /translation="MQDNIIDRRSFFKLGLLGGSVVAASTIGGGAVLKAAELTHSHQA
                     SQGKSNKIRGRMFFQTQTEFDTLSAACERIYPKDEQGEGAIGLGVPYFIDNQLASAYG
                     YNDREYMQGPFMEGKAEQGYQTPMQRKDIFLEGVHALEENAQKRYKKSFSLLKGGDQD
                     KILSDFEKGKIQTTGFKSSYFFTLLRDMTVAGVLADPIYGGNDNKNGWRMMQYPGAQM
                     SYVDKIASDEFFNIEPMGLADMES"
     gene            complement(4141..4845)
                     /locus_tag="RJ239_000595"
     CDS             complement(4141..4845)
                     /locus_tag="RJ239_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HDV7330730.1"
                     /translation="MRIFLTLFLFFNSLFALSELEEGLKLYEANKFDKAYEIFKSLCE
                     KDISKACFSLAFMHESARGVSKDLNQAYKFYDKACKLGLANACSNMALLLQNQGYENE
                     ALLAFNKACTLGESLSCNNIALFYEKEKDGQMASSFYKRSCDLKNARACYQLGSLYDK
                     GELVKASVKSALAFYSKSCTLGFGEACYLLGRYNQLEKQDLTKAKRYFGMACDQKHQE
                     ACAAYKELNSKDIELY"
     gene            complement(4845..6674)
                     /locus_tag="RJ239_000596"
     CDS             complement(4845..6674)
                     /locus_tag="RJ239_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HDV7330731.1"
                     /translation="MQINLLNDFIKAYENTYSVSFDDSFKGRIQELCKELNEPFMHAS
                     YALENELKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLR
                     YAKEYFLRVEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTP
                     GLNANENDTLTTLDELKNIHGAIWLSLIDNAGKKSEEDAIKANLELLGENSICVLNQK
                     DKLSAEELDNVLNYAKSVFLKYFNELIAISCKEAKDEQSYEKSNFQSLLDFLTQLDTT
                     VLKEKFVKRKILNLCEILEDENQLFVGIFDRLLNQFQSYEKHLLLAYENFLKEIEILN
                     HQILEQLKSISERISSEIFASVKEKDAYFYKESKGFLKKDLYTRYDYKAPYISSDDAF
                     LAMFYNSDVMSKEFKKIKNELYKSFEEIKMKLKDFINILEREILLFKAEFSNIQKDHI
                     FQSDKNFSELRAFCNASDEYFLKDFKELLFKSILELDLFFEKLNLKAFTNYENATKLS
                     LAFFSRKINESRVLYELDSSEFVLFYPKKSEIYERVLNELNVYEFETLLINKPILTKI
                     AKNFLEQSQNLIQEKNKFLDLKKAELQKRRAQILNVRESIKED"
     gene            complement(6664..8850)
                     /locus_tag="RJ239_000597"
     CDS             complement(6664..8850)
                     /locus_tag="RJ239_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HDV7330732.1"
                     /translation="MKELFQKIWQNELQFLNFDAKFQDKSKLDTAECAIILSVNKDNY
                     ERYFLLKEFQELCKKIDLRVDIFSMQNAQICILNLFKSGFISKQDLLKALKILEKISK
                     NTEIFDFILQEKVQSIDQKALFQNDFKELNTINLELQKLSFDENLKSRLQKTLEKFQN
                     LEFNIAITGVMNAGKSSLLNALLKEDFLGVSNIPETANLTVLSYGKSEEAKIYFWDKK
                     EWQNILESSHFNADLKEFIDKLDKSVNIEDFIKDKPLIQNIALCELKNFSSAKNKISA
                     LIKKIEIKSHLEFLKNNISIVDTPGLDDVVVQREIVTNEYLRESDFLIHLMNASQSLT
                     QKDADFLVHCLLNSRLSKFLIVLTKADLLSKKDLEEVIVYTKESLKSRLVDLDENLVE
                     KIDFLCVSAKMASDFYKGLASKESLQKSGMQEFENYLFNELYAGEKSKIALRAYKKEL
                     HLELKNILSEYEMQNRLIKENKQGVSEENQKLLLELQKQNTLLKEAQDEISNSIAKLK
                     NIDSGIDNLVLLLAKKLKERLIDEFKYLKNNAQKLNLSRILNIVDITTKDGINDILRE
                     IKFENIKKIEELKTNLSLKYDFLKDDFDNGFEGFKDGISKNIDSIFQSEKFALLRLKI
                     EKLSNLKSDLYELETNLDTVIFDTFKEFKMSEILNSLNINGAFFEFLNDKLKHYEKNQ
                     KSKLESLEKVLQSLKNQDANILNSFEENLEKIEKLKQLEMGLLNAD"
     gene            complement(8878..9603)
                     /locus_tag="RJ239_000598"
     CDS             complement(8878..9603)
                     /locus_tag="RJ239_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase iron-sulfur subunit"
                     /protein_id="HDV7330733.1"
                     /translation="MSRKLTIKAFKYNPLSKISKPHFVTYELEETPFMTVFVCLTLIR
                     EKMDADLSFDFVCRAGICGSCAMMINGVPKLACKTLTKDYPDGVIELMPMPAFRHIKD
                     LSVNTGEWFEDMCKRVESWVHNEKETDISKLEERIEPEVADETFELDRCIECGICVAS
                     CATKLMRPNFIAATGLLRTARYLQDPHDHRSVEDFYELVGDDDGVFGCMSLLACEDNC
                     PKELPLQSKIAYMRRQLVAQRNK"
     gene            complement(9596..11587)
                     /locus_tag="RJ239_000599"
     CDS             complement(9596..11587)
                     /locus_tag="RJ239_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase flavoprotein subunit"
                     /protein_id="HDV7330734.1"
                     /translation="MNIQYSDALVIGGGLAGLRAAIEVAKSGQSVTLLSICPVKRSHS
                     AAVQGGMQASLANGAKGEGDNEDLHFADTVKGSDWGCDQEVARMFAQTAPKAVRELAA
                     WGVPWTRVTKGPRTVVINAQKTVIEEKEEAHGLINARDFGGTKKWRTCYIADATGHCM
                     LYGVANEAIKHQVKIIDRMEAVRIIHDGKKCLGVIARDLTNGQLIAYIARGTMIATGG
                     YGRIYKQTTNAVICEGTGAAIALETGLCRLSNMEAVQFHPTPIVPSGILLTEGCRGDG
                     GILRDVDGYRFMPDYEPEKKELASRDVVSRRMMEHIRKGKGVKSPYGDHLWLDISILG
                     RAHVEKNLRDVQDICKTFNGIDPADEGPKGWAPVLPMQHYSMGGIRTKPTGESQWLNG
                     LFACGEAACWDMHGFNRLGGNSCAETVVAGMIVGDYFADYCKNNGEVIDTNVVKDFLT
                     KEYQYLKSLVDKEGKHNVFEIKNRMKEIMWDKVAIFRTGEGLKEAVDELEKLYKDSQD
                     VKVHCKELDCANPELEEAYRVPRMLKIALCVAYGALLRTESRGAHYREDYPKRDDLNW
                     MKRTNTFWVEGETLPRIEYEELDIMKMEIPPAFRGYGAKGNIIENPLSEKRQAEVDAI
                     REKMEAEGKGRYEIQNALMPYELQAKYKAPNQRIGVDYE"
     gene            complement(11571..12353)
                     /locus_tag="RJ239_000600"
     CDS             complement(11571..12353)
                     /locus_tag="RJ239_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase cytochrome b subunit"
                     /protein_id="HDV7330735.1"
                     /translation="MRELIEGYLGKSIEGKKSKMPAKLDFIQSASGLFLGLFMWVHML
                     FVSTILVSEDFFNSVVHFLELKFVYDNPVMSYLTSFLAACVLVVFFVHALLAMRKFPI
                     NYRQYQILRTHSKKMNHSDTSLWWVQAFTGFIMFFLGSAHLIFIVTNADKISGDMSGD
                     RVVSHFMWLFYAVLLVCVELHGSIGLYRLCVKWGWFEGKNVKESRKKLKTAKWIISIF
                     FLVLGVLSLAAFIKIGYENYQNQTQTTAMIKNYNGANYEYTI"
     gene            complement(12423..13238)
                     /locus_tag="RJ239_000601"
     CDS             complement(12423..13238)
                     /locus_tag="RJ239_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HDV7330736.1"
                     /translation="MEFWQHIYSNFNVIAFSIFGLKVHWYGIMYVIALLLALLLAKFF
                     VRKFQLDINEKHLDSYFIWVEIGVILGARLGYILIYDANTMYYITHPWQIFNPYINGE
                     FVGIRGMSYHGAIIGFLIATLLFCKKYKTNPWIFLDLVALSVPLAYVFGRIGNFLNQE
                     LFGRITNVPWGIYVDGVLRHPSQLYEAFLEGIVVFIIVYLARFKQSFQGELILVYAGA
                     YSLARFICEFYREPDFGIGFVLWGMSMGQILSFIMFITALLVYICIKFKKVNI"
     gene            13328..14227
                     /locus_tag="RJ239_000602"
     CDS             13328..14227
                     /locus_tag="RJ239_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7330737.1"
                     /translation="MKKYILLASSMLILAACGGTSSNFVNVSMPNFKPQVPTKVEPID
                     SGVSIALVPINIEQNNNYSDYFENSVLKIRIEKEIDLLKQNLEEQIKTIAQLKGYKIV
                     TTNPDYTLKSSISIYTEEKNVQKTSNFMSGDYVKSNLGINFKGKIDFIDAHNPQNSTN
                     LSSSTKLDSLVALNYPIKNDDGVNMFKTTISTVPTQLNKGLEQPAFEIDKSFLAFYKN
                     TLNTLYNNLPKATDIGKTIPNTNSGFNSFDGDATFEESLPQTNSNQNNTIENAPTQNI
                     PTNPSSTNQNNQSKNQDGVEIFE"
     gene            complement(14302..15090)
                     /locus_tag="RJ239_000603"
     CDS             complement(14302..15090)
                     /locus_tag="RJ239_000603"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HDV7330738.1"
                     /translation="MKFLAVIGDPISHSKSPRMHNNAIKALGLDSIYTRYHLRNANCL
                     REDFFKLGLSGANITLPFKEKALDIADVKDDFARNIGSANTLCLKEDKIYAYNTDALG
                     FLEAIKDFDNIKKALILGAGGTALALAYALKQKGVEVYIANRSKERFKDFLAYPTYLY
                     KNLQDFDFDLVINSTSTGLKDENLPCDRELLDRILPKAKFAFEVIYGRETPFYRLCKE
                     YHLKIKDGLDMLLWQGVFAFELFFEIQDKREMIKNAMQQALILK"
     gene            complement(15087..15923)
                     /locus_tag="RJ239_000604"
     CDS             complement(15087..15923)
                     /locus_tag="RJ239_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HDV7330739.1"
                     /translation="MENQKNEFDDIILEKSNKSEKVKKILLRVIALVILFLAIMIVMK
                     LINGSGDENTQNQSVLPSEPIATQDNNNDTSFESMPITDNTSAKDQFEALRKQFQDEQ
                     NTTQNTTTSSSNNNDTTNFAMPDQEVPAEPTATTSANTTPQASTPKQEVTQTAKSKEE
                     AKKQTAVKKEKESAKQTPKKEQNANDLFKNVDAKPVHPSGLASGIYVQIFSVSNLDQK
                     SKELASVKQKGYDYKLYKTTVGSKEITKVLIGPFEKADIAAELAKIRKDIAKDAFSFT
                     LK"
     gene            complement(15937..16482)
                     /locus_tag="RJ239_000605"
     CDS             complement(15937..16482)
                     /locus_tag="RJ239_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1882 domain-containing protein"
                     /protein_id="HDV7330740.1"
                     /translation="MISPMDMSLIKIIGDHYYIRRDKIVNKITHRGRLFFDKFERVDA
                     PLNLNVMREHAAKKIVVAHDLITKDNKVENIVFDYNGFNAERFYHRAQLILREEGFIN
                     FTAYKTKTPGHLHLYIHKGHTALNEGYSLASKLSMMFASKMPVEWKVFPSMDVPREFN
                     ILILPYEVYQKERGSSWSKHM"
     gene            complement(16479..17723)
                     /locus_tag="RJ239_000606"
     CDS             complement(16479..17723)
                     /locus_tag="RJ239_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HDV7330741.1"
                     /translation="MSLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGS
                     ILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFANVQPNSGSQANQGVYA
                     ALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKE
                     KPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVV
                     SSTTHKTLRGPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDE
                     WKVYAKQVRTNAQVLANVLMDRKFKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAG
                     ITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDVNNEKLQ
                     ENIKQELKKLASNFIIYERAMF"
     gene            complement(17720..19225)
                     /gene="lysS"
                     /locus_tag="RJ239_000607"
     CDS             complement(17720..19225)
                     /gene="lysS"
                     /locus_tag="RJ239_000607"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HDV7330742.1"
                     /translation="MFDNILEQQRIEKAKELKNLGINPYPHFLEKEMSLKTFKDKFSY
                     ILEQVEKRDESVNAVVAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTIL
                     KKNLEVGDIVLVKGFPFVTKTGEFSLHASEVKLATKAIVPLPEKYHGLTDIEQRYRKR
                     YVDMIMNVEVRKDFLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHN
                     SLGVERFLRIAPELYLKRLIVGGFEAVFEINRCFRNEGMDLTHNPEFTTIEFYWAYHN
                     YKDLMDLTEELFALLLDKLNLGKTIEFDGKMINFSKPFERITYKDALCKYGGLDRDLI
                     EDKEKILTKLKADGFEANEKLELGHLQAELFDNYVEEKLINPTFVIDFPISISPLSRR
                     SDEDSQIAERFELFICGRELANGFNELNDPLDQYERFLKQIEAKNAGDEEACEMDEDF
                     VNALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFPAMRPLKSELKEKE"
     gene            complement(19226..19699)
                     /locus_tag="RJ239_000608"
     CDS             complement(19226..19699)
                     /locus_tag="RJ239_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HDV7330743.1"
                     /translation="MLIENVEYDVLLERFKKILRQGGLKYTKQREVLLKTLYHSDTHY
                     TPESLYMEIKQAEPDLNVGIATVYRTLNLLEEAEMVTSISFGSAGKKYELANKPHHDH
                     MICKNCGKIIEFENPIIERQQALIAKEHGFKLTGHLMQLYGVCGDCNNQKAKVKI"
     gene            complement(19701..20264)
                     /locus_tag="RJ239_000609"
     CDS             complement(19701..20264)
                     /locus_tag="RJ239_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HDV7330744.1"
                     /translation="MNFYWFDAFILGFTLLLGLKGIINGLIKEIFGLLGIIGGVFIAS
                     KYATQAAEFIQSTFYKIENQSLAGFAGFLAILIIFWIACLLAGNFLSKLIKLSGLGFL
                     DRIGGFIFGGAKIFLIFAILVFCVARIDFLNDKLDNFAKNSYTLNLLKETGSFIMNQP
                     LTENSLDHASEKLQDIVSDLNNTQKGE"
     gene            complement(20332..20616)
                     /gene="gatC"
                     /locus_tag="RJ239_000610"
     CDS             complement(20332..20616)
                     /gene="gatC"
                     /locus_tag="RJ239_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HDV7330745.1"
                     /translation="MQIDEKLLSKLEKLSALQITKNRNETIAQLSEIVNFVEKLNELD
                     LDSQEITVSTIKGGAPLRIDEIRNSNVIDEVLDCAPKKQEHFFVVPKIIE"
     gene            20760..21338
                     /locus_tag="RJ239_000611"
     CDS             20760..21338
                     /locus_tag="RJ239_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330746.1"
                     /translation="MGLKDNLKAVKNELNTEEQFIENFIKGERFIRKYKFYISAVVII
                     LVAWFAGNFIISKINDYKTKEANEIYANLIQDPSNKNLLEQLKNKNTNLYAIFLLKEN
                     INDFNNTTLQNELKQIYNNAQTNTLLKNIIALSLGDKSIFLKNYDKLLEAYKLLEQNK
                     IEEANVLLSQIKENSSLNQIAKNLKHYQGITQ"
     gene            21335..22333
                     /locus_tag="RJ239_000612"
     CDS             21335..22333
                     /locus_tag="RJ239_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7330747.1"
                     /translation="MKKIFLTLFCLIFLCACGTKRQYFEPKQTDGDLSHNSNLKSKIV
                     DWNLVSAKLSNNTTILKNNISIDKFKLPKNYMLLAYQDGEYFTADNNGNLKIFDNSYN
                     EIYNFQFDASVVGVASNGDDLALVLANNTIVLANRSLGIKFSQTLTSAPAQDSRTANP
                     IFLDNIIVYPTLDGKILILSRNNLQIIKDVVISAENFFNNVIHLSVIGDKLIAATAKK
                     IIVVSPARTLYLDADIKDVALSDDGIFILEKDGTIIKTDYNLRKIAEKKFEFAIFVKS
                     NIYNNYLYIFEKTGYLIKMNLNLDNAQVFKLSEAVDKISFMGNGKFYYGDKILDLL"
     gene            22330..22620
                     /locus_tag="RJ239_000613"
     CDS             22330..22620
                     /locus_tag="RJ239_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tram-like protein"
                     /protein_id="HDV7330748.1"
                     /translation="MIKILEQTIKALKLNLKPYDLSMLTRKKSYICAKDQNNILFMYT
                     GKTKFLMKDALFLENLAQQININNKYFFSMASLCSKAKNHLEMKGFNIYVAL"
     gene            22607..23236
                     /locus_tag="RJ239_000614"
     CDS             22607..23236
                     /locus_tag="RJ239_000614"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HDV7330749.1"
                     /translation="MLLCDIGNSNANFLDDNKYFTLNIDQFLEFKNEQKIFYINVNEH
                     LKEHLKNQKKFINLEPYFLFDTIYQGLGIDRIAACYTIEDGVVVDAGSAITIDIISNS
                     IHLGGFILPGIANYKKIYSHISPRLKSEFNTQVSLDAFPQKTMDALSYGVFKGIYLLI
                     KDAAQNKKLYFTGGDGQFLANYFDHAIYDKLLIFRGMKKIIKENPNLLY"
     gene            23355..24701
                     /locus_tag="RJ239_000615"
     CDS             23355..24701
                     /locus_tag="RJ239_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HDV7330750.1"
                     /translation="MSQQEFDVLVIGAGISGAALFYELARYTNIKNIALIEKYNTAAT
                     LNSKGTSNSQTIHCGDIETNYTLEKARKVKRTADMIVKYGLMQNAQNNFMFSHQKMAL
                     AVGDIECDYMKKRYEEFKELYPYIKFFDKAKIKQIEPKVVLGEDCNQDRPENICAMGV
                     ESGEVFTTVDFGKMSINLIEQAQKQNKNTFVAFNQEIIHIEKKDDIFILKTSNHQEYH
                     AKSVVVNAGAHSLYLAHKMNLGMDKSCWPVAGSFYLTKQKLLNGKVYMVQNPKLPFAA
                     LHGDPDLLADMNTRFGPTALVIPKLERYHGLKSVPEFFEALKLDKTVLKVTFNMFKDA
                     TIRNYIFYNYLFELPFVDKSLFVKDAKKIVPSLKASDIYYAKGFGGVRPQVIDKTKGE
                     LMLGEASITETPGIIFNMTPSPGATSCLGNAERDAKLVCNYLGMEFNEDKFSSELL"
     gene            24750..26192
                     /gene="pyk"
                     /locus_tag="RJ239_000616"
     CDS             24750..26192
                     /gene="pyk"
                     /locus_tag="RJ239_000616"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDV7330751.1"
                     /translation="MLKKTKIVATVGPASEKEEILRQMIINGVNVFRLNFSHGTHEYH
                     KKNLDTIRRVAKELHTRIGILQDISGPKIRTGELKEPFELKKGDRLDFYRETILGEKI
                     AQNHYKISINQKSILDMLKIDEYIYLYDGSIRAKVVNIDNQKIETIIENDGFLNSNKG
                     INFPNTKINIDVITQKDKNDLLWGIKNEVDFLAISFVQNAHDIDEVREILAQNNAKIS
                     IFAKIEKFDAVENIDEIIKSSDGIMVARGDLGIEVPYYKVPNIQKEIIQKANNASKPV
                     ITATQMLFSLAKSKTATRAEISDVANAVLDGTDAVMLSEESAVGIDPANAVDIMCQTI
                     IETEKRYPYNKFNDFNDLDNTDKIMRSSAHLATDLNADAIFSLTSSGKSAIKIARYRP
                     NIEIIAVGHSEKTLNSLSIVWGVNPAILVNKSNELTELLKDSVRSSVEKGFMDEDKCY
                     LLTAGFPTGVEGTSNLIRILNKEQIAYYLQ"
     gene            26290..26925
                     /locus_tag="RJ239_000617"
     CDS             26290..26925
                     /locus_tag="RJ239_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330752.1"
                     /translation="MQVNTFSNIASMARTQVSNKKADDAKENTKDKNVQSANSSKDVD
                     KNTLEKLNALGGKGITQIYLVQFQQQTMNAVIGSSNAQTGLDSLLNGANLDTAKSILT
                     NIDFASLGYSSKNPLDMNTDELQQLVSEDGFFGVENTANRIADFVIKGGGDDVEKLKK
                     GLEGMKKGFEQAEKMWGGELPQISQNTIDAALKKVSDRIDELGGKTLDLQA"
     gene            complement(26956..>27464)
                     /locus_tag="RJ239_000618"
     CDS             complement(26956..>27464)
                     /locus_tag="RJ239_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330753.1"
                     /translation="QNAQIHFKNLKLDYRSVFGGPNIAREFYVNLMHIAGLLNLERQK
                     FKELINVSGAKDEGILQTLAYLDIFAQQYEEAYALYNSLIDDYGAKDTKTLFLAAVAA
                     VGANNPNSAIALLQLSKLTDKNNKESKAALGMLYQEVKNYEAAISQYKTLPNNFKSEF
                     FTFDINNN"
BASE COUNT         9647 a         4836 c         3514 g         9467 t
ORIGIN      
        1 tttttcaggt ttgtaaaatt ctatcatagc cttttcacaa aataaaattt tttcaaaaag
       61 ttccttttgc aactctaaag gacaatcgct aaattcttta taaatttctt tagtaaaaat
      121 tttaagccaa ggcacttgag cctcctcttt ctctatataa atcaaatcat tttcataaat
      181 cattacattc ctttgaaatt gtatttatga ttattttaca aaatttatca aatttttaag
      241 tcaaaatgcg ttaaaattcc taaaaattta aaaaacaaaa agaaggataa atgcaaatta
      301 gttcaagtta taactcttat gattactact ctagcaaacc ttcttttgat aaaacaaatc
      361 aatctgattc cactcaaaaa gatgaaaaaa atcttagtga aaataaagat gataaagaaa
      421 aaaatggcga acaaacccaa atggttaatg gcgtagagct aagccaaaaa gaagtagctc
      481 aagttcgcga actccaaagt atcgatagaa atgtaaaggc tcatgaagct gcacatcaag
      541 cagcgggtgg cggcttagca ggtgctgcaa gttttactta cacaagaggc cctgataatc
      601 aaatgtatgc tacagcgggc gaagttccta tcagcatgca aaaaggaaac acaccagaag
      661 aaactatagc caatgcaaga caaatcgcag cagcagctat ggctcctgct gatcctagcc
      721 cacaagacta taaagttgca gcaaatgcta caaaaatgga atttgaagca agagctgaag
      781 caatgaaact taaagccgaa gaagccaaag aaaaagaaga agaaaataaa gaaaaagatg
      841 acaaaaattc agaaaatagc ttagaaaaaa cagataaaga ttcaaaaaac aacgataaaa
      901 attcaaattt tgataaagac tttaaaaatc ttgtcactag aacttatcaa caaaattcac
      961 aaaataacga cattaaattc agcatcgcat cttaaaattc ttaatttaaa taaaaaaatt
     1021 atgccaatct tccttataaa taaagctttg ttttaaaact aaacggacat gtctaaaaat
     1081 ttattttttt attatctgct ttatctgtat ttgtagaatt actttgctct tcttttttgg
     1141 cttctacttt tttttgtacc ttcttgctgt tccataagct ttaaagtatc atatatttga
     1201 tgaacttcct taggcataca tttatggaaa cgatgacttg aatttgcatg taaaatattt
     1261 aacatttttt atccttttta taatttaaat ttttgcattt tcaatacttt catctctaat
     1321 tttagtaagt gtctgcagag gattatttcc aaaatatcta ttaaaagaac ttaaagtaat
     1381 catcttgcat accaccctcc aagagcagac tacatttgcc tttttgtata attgtagttt
     1441 gaataagaat ttataccatt aatcattttt gccttccttg atattatata ctatatcgga
     1501 agaaaattaa aaatttataa tcttgagagt tttcaaaaac tctcaagtta ttatcaagct
     1561 aagctttttc cacttttatg atattttaaa ataccttcag cacagcgata agccaaagct
     1621 cccacagtat cagttggatt atatccacta ttatgttgga aatttcctgc tcctacaaca
     1681 aaaagattat ccgcatccca gtgttgtaaa taagtattaa ccacactagt ttctctatct
     1741 gcgcccatgg ttgttccacc tgtgttatga gtagattgat aaggcacaac gctataatcc
     1801 ttaagataag cacctttttt gattgatttt actccttgca ttctttttgc tacctcagct
     1861 gttttatctg tgataaattt atgcaaagct ctatcttgat cagtgaaatt ataagttaag
     1921 cgtaaaagtg gcataccaaa agcatcttta taagttggat caagacttaa ataattattc
     1981 ttatgaggca aagaagcacc ttgccctcct acggtaatag ctcttgtgaa attatagttt
     2041 aatgcttttt taaattcggc accccaagtt ggagctcctg ctggaagtgg ggctgattgt
     2101 atagggcgag ttccaagctg aacgctataa atcatagctc catgaaggaa tttttcctta
     2161 gaatgatcaa aattatctcc gttaaaatca tcactcgtag ttcctaaagc acctgaaccc
     2221 ataaaggtgt taaattgctc atcaaagaaa gctgttgtgc ccatgttcat ttggtaacaa
     2281 taatttctac ctaaagttcc tttacctgtt tttggatcgt attgctcacc tatgttgctt
     2341 accattaaaa gcttagcatt gttaaacata taacttgtaa gtacaactat atcagcaggc
     2401 tggatatact ctttcatcgt tctagtatcg acaaatttta cccccgttac ttttccgtct
     2461 tttttaagaa tttgcgttac attactataa gtgcgtatgg tgtatttacc tgtgctcata
     2521 gcctttggaa ttactgtgtt taaaggactt gcttttgcac catactcaca accaaaacgc
     2581 tcacaatacg cacagtattg acaaggagct aaatcttgac catcagggtt tgtatagcca
     2641 cctttagaat ttgaagctgg caaacgataa gtgtgtaaat ttgaactttt tgctgcactt
     2701 tcaaatcgtt taagcatttt agtattttca agaggttctt gtggataagg actggatcta
     2761 aaagctccca ttttttccgc taaaggattt ggttcacctg ataccccaca ggttttttca
     2821 aatctatcat aataaggctc catatcctta taagtcacgc cccaatcttg caaggtataa
     2881 tcattaccta atttattacc atatctttgt ttgcttaggg tttgaatttc aaagtcataa
     2941 ggcataaacc taaaagtcca accattccaa tgcacccctg caccgccaac attattaccc
     3001 aataaaaacg aacccatttt acgataaggt aaggctaaac cactaggatc atggcgaaaa
     3061 gtcacagtgt cttttgagca atcttgcatc aaaccataat taatcccata tctccactca
     3121 tcatggatat aattaaaatt ttcagtactt tgcatatgtc cgcgttctaa actaagtaca
     3181 ttcaaacctg ctttagtaag ctctgcagcc actatacctc cagtccatcc tgctccaact
     3241 gttactacat ctactttttt taatacttca gccattttaa ctctccatat ctgctaaacc
     3301 cataggttca atgttaaaaa attcatcact tgcaatttta tccacatagc tcatttgtgc
     3361 gcctggatat tgcatcattc tccaaccatt tttattatca tttccgccat aaattggatc
     3421 agctaaaact ccagctactg tcatatctct taaaagtgtg aaaaaataag aagatttaaa
     3481 acctgtagtt tgaatttttc ctttttcaaa atcgcttaaa attttatcct gatctccacc
     3541 tttaagcaaa gaaaaagatt ttttataacg cttttgagca ttttcttcaa gagcatgcac
     3601 gccttctaaa aaaatatctt tgcgttgcat aggagtttga tagccttgtt cggctttgcc
     3661 ctccatgaaa ggcccttgca tatattctct atcattataa ccataagcac tagctagctg
     3721 attatcgata aaataaggca cgcctaaacc tatagctcct tctccttgct catctttagg
     3781 ataaattctt tcacaggctg cacttaaggt atcaaattca gtttgagttt gaaaaaacat
     3841 tctacctcta attttatttg attttccttg tgaagcttga tgcgaatgcg taagttctgc
     3901 tgcctttaaa acagcaccgc cacctatagt gctagctgct actacagaac cacctagaag
     3961 ccctagttta aaaaagcttc tgcgatcaat aatattgtct tgcattactt ctccttgata
     4021 ataatttaaa caagactata ttagtcctat taatataaat ttaactttaa aaagcgataa
     4081 attttgtgtt attcttaatt ttatttaagt atatctttga aagtaatgaa aatagaactt
     4141 ttaataaagc tctatatctt tagaattaag ttctttataa gctgcacaag cttcttgatg
     4201 tttttgatca caagccatac caaaatatct ttttgccttt gttagatctt gtttttctag
     4261 ttgattatag cgtcctagca aataacaagc ctcaccaaaa cctaaagtgc aagatttaga
     4321 ataaaaagca agagcagatt ttacacttgc tttaacaagc tctcctttat catataaaga
     4381 tcctaactga taacaagctc ttgcattttt taaatcacaa gatcttttat aaaaacttga
     4441 ggccatttgt ccatcttttt ctttttcata aaataaagct atattattac aacttaatga
     4501 ttctcctaaa gtgcaagctt tattaaaagc caaaagagct tcattttcat aaccttgatt
     4561 ttgcaaaagc aaagccatat tagaacacgc atttgctaaa cccaatttac aagctttatc
     4621 ataaaattta taagcttgat ttaaatcctt actcacaccc ctagcacttt catgcataaa
     4681 agctaaagaa aaacaagctt tagaaatatc tttttcacaa agacttttaa aaatttcata
     4741 agctttatca aatttatttg cctcgtaaag ttttaaaccc tcttctagtt cacttaatgc
     4801 aaataatgaa ttaaaaaata aaaataaagt taaaaatatt ctcattaatc ttcctttata
     4861 ctttctctaa catttaaaat ctgtgctctt cttttttgaa gctctgcttt tttaagatct
     4921 aaaaatttat ttttttcttg gattaaattt tgactttgtt ctaaaaaatt ttttgcaatt
     4981 tttgtcaaaa taggcttatt aataagcaaa gtttcaaact cataaacatt taattcattt
     5041 aaaactcttt cataaatttc acttttttta ggataaaaaa gtacaaattc agaactatca
     5101 agctcataaa gaacacgact ttcattgatt ttacgactaa aaaatgcaag gcttagtttc
     5161 gtagcatttt cataatttgt aaaagcctta agatttaatt tttcaaaaaa taaatcaagc
     5221 tctaaaatac ttttaaataa aagctcctta aaatctttca aaaagtactc atcacttgca
     5281 ttgcaaaaag ctcttaattc actaaaattt ttatcacttt ggaaaatgtg atctttttgt
     5341 atgtttgaaa attctgcttt aaaaagcaaa atttctcttt caagtatgtt tataaaatct
     5401 tttaatttca tcttgatttc ttcaaaagat ttataaagtt catttttgat ttttttaaac
     5461 tctttactca tcacatcact attataaaac atcgccaaaa aagcatcgtc gcttgaaata
     5521 taaggcgctt tataatcata tcttgtgtat aaatctttct ttaaaaatcc tttgctttct
     5581 ttgtaaaaat aagcatcttt ttccttaaca cttgcaaaaa tttcactaga aattctttcg
     5641 ctaatgcttt taagctgttc taaaatctga tgatttaaaa tttcaatctc ttttaaaaaa
     5701 ttttcatacg ctaaaagtaa atgcttttca taactttgaa attgatttaa taaacgatca
     5761 aaaataccta caaaaagttg gttttcatct tctaaaattt cgcataaatt taaaattttt
     5821 cttttaacaa atttttcttt taaaactgtt gtatctagct gagttaaaaa atcaagcaaa
     5881 gattgaaaat tagatttttc atagctttgc tcatctttag cttctttgca agaaatagca
     5941 ataagctcat taaaatattt taaaaacaca ctttttgcat aatttaaaac attatctagc
     6001 tcttctgcgc ttaatttatc tttttgattt aatacacaaa tgctattttc tcctaaaagt
     6061 tctaaatttg cttttatggc atcttcttca ctttttttac ctgcattatc aattaaactt
     6121 aaccaaatcg ccccatgaat atttttaagt tcatcaagag ttgttaaagt atcattttca
     6181 tttgcattta aacctggagt atctacaaga gtgatttttt caagtaaagg aatgggtgca
     6241 aaaatatgca aactttttgc ttgttttact tcatttcttt gatccgtata aaaggctaat
     6301 ttttctatat ttgtgataat atcacttcca tcttcaaatt ctactcttaa aaaatattct
     6361 tttgcatagc gtaaaaaagt aggtttaaaa gtaacaggaa caacacccgt aggcaaacaa
     6421 tcacgcccta agatcaaatt tagcaaactt gatttaccac ttgaaaactg ccctataata
     6481 gcgatattaa cattcttatc caaagaaaac acaagctctt ttaattcatt ttctaaagca
     6541 taacttgcgt gcataaaagg ctcgttaagt tccttgcaaa gctcttgaat acgcccttta
     6601 aaactatcat caaaactcac gctataggta ttttcatagg cttttataaa atcatttaaa
     6661 agattaatct gcatttaaaa gccccatttc aagttgtttt aatttttcaa ttttttctaa
     6721 attttcttca aaagaattta aaatattagc atcttgattt ttcagactct gtaaaacttt
     6781 ttcaagactt tctaattttg atttttgatt tttttcataa tgttttaatt tatcatttaa
     6841 aaactcaaaa aatgctccat tgatatttaa agagtttaaa atttcgctca ttttaaattc
     6901 tttaaaagta tcaaaaataa ccgtatctaa attcgtttca agctcatata aatctgattt
     6961 tagattgctt aatttttcaa ttttcaatct taaaagtgca aatttttcgc tttgaaaaat
     7021 actatctata ttttttgaaa ttccatcttt aaaaccttca aaaccattat caaaatcatc
     7081 ttttaaaaaa tcatatttta aagataaatt tgttttaagc tcctcgattt ttttaatatt
     7141 ttcaaattta atttctctta aaatatcatt aatcccatct tttgtggtaa tatcaactat
     7201 atttaaaata cgagaaagat taagcttttg tgcattattt ttcaaatatt taaactcatc
     7261 tatcaagcgt tcttttaatt ttttagccaa aagtaaaaca agattatcta tgccactatc
     7321 tatattttta agttttgcaa tggaatttga aatttcatct tgtgcttctt ttaataaggt
     7381 gttttgcttt tgaagttcaa gtaaaagctt ttgattttct tcacttacac cttgtttatt
     7441 ctccttaata agacgatttt gcatttcata ttcgcttaga atatttttaa gctctaaatg
     7501 caattctttt ttgtaagctc ttaaggcaat cttacttttt tctcctgcat aaagctcgtt
     7561 aaaaagatag ttttcaaatt cttgcatacc acttttttgc aagctttcct tggacgctaa
     7621 acctttataa aaatcacttg ccattttagc gctcacacat aaaaaatcaa tcttttccac
     7681 taaattttca tctaaatcca caagtcttga ttttaagctt tccttggtat aaacaatgac
     7741 ttcttctaaa tcctttttgc ttaacaaatc cgctttagtt aaaacaatta aaaacttact
     7801 cagccttgaa tttaaaagac aatgcaccaa aaagtctgca tctttttgag tcaagctttg
     7861 agaagcattc attaaatgaa ttaaaaaatc actttctcta agatactcat ttgtaacaat
     7921 ttctctttga actacaacat catcaagccc tggagtatca actatagaaa tattattttt
     7981 taaaaattct aaatgacttt taatttctat ttttttaatt aaagctgaaa ttttattttt
     8041 agcagaactg aaatttttaa gctcacaaag tgcgatattt tgtatcaaag gtttatcttt
     8101 aataaaatct tctatattta cactcttatc cagcttatca ataaattctt ttaaatctgc
     8161 attaaagtgc gaactttcaa gtatattttg ccattctttt ttatcccaaa aatatatctt
     8221 tgcttcttca ctcttaccat agcttaatac tgttaaatta gctgtttcag gtatgtttga
     8281 aacccctaaa aaatcttctt ttaaaagagc atttaaaaga cttgattttc ctgcattcat
     8341 cacgccagtg atggctatat taaactctaa attttgaaat ttttccaaag ttttttgaag
     8401 tcttgatttt aaattttcat caaaacttag cttttgaagc tctaaattaa tggtgtttaa
     8461 ttctttaaaa tcattttgaa ataaagcttt ttgatctata ctttgaactt tttcttgtaa
     8521 aataaaatca aatatttcgg tatttttcga aattttttct aaaattttta gagccttaag
     8581 taaatcttgc tttgaaataa aacctgattt aaaaagattt aaaatacaaa tttgagcatt
     8641 ttgcatacta aaaatatcca ctcttaaatc aatttttttg caaagctctt gaaattcttt
     8701 taagagaaaa tatctttcat aattgtcttt attgacactt aaaataatcg cacactcggc
     8761 tgtatcaagt ttgcttttat cttgaaattt agcatcaaaa tttaaaaatt ggagttcatt
     8821 ttgccaaatt ttttggaata attctttcac aatcttcccc ttaaaaaggg gaaagattta
     8881 tttatttctt tgagcgacaa gttgtcttct catataagcg attttacttt gtaaaggtaa
     8941 ttctttaggg caattatctt cacaagcaag caatgacata caaccaaaaa caccatcatc
     9001 atcgcctact aattcataaa aatcttccac acttctatgg tcatgcggat cttgtaaata
     9061 tctagctgtt cttaaaagcc ctgtagcagc tatgaaattt gggcgcataa gtttagttgc
     9121 acaagaagct acacaaattc cacactctat acaacgatca agttcaaaag tttcatccgc
     9181 aacttctggc tcaatgcgtt cttcaagttt agaaatatca gtttcttttt cattatgcac
     9241 ccagctttca acacgcttac acatgtcttc aaaccactcg cctgtattca cgcttaaatc
     9301 tttaatatgc ctaaatgcag gcataggcat aagctctatc actccatcag gataatcttt
     9361 agtcaaagtt ttacaagcaa gttttggcac tccattaatc atcattgcac aagatccgca
     9421 aatccctgca cgacaaacaa agtcaaaact cagatctgca tccatttttt cacggatcaa
     9481 agtcaaacat acaaaaaccg tcataaaagg agtttcttca agctcataag tcacaaaatg
     9541 tggtttagaa attttgctta aaggattgta tttaaatgcc tttattgtca attttctact
     9601 cataatcaac tcctattctt tggtttggtg ctttatattt agcttgcaat tcataaggca
     9661 ttaaggcgtt ttgaatttca taacgacctt tgccttcagc ttccattttt tcacggatag
     9721 catccacttc agcttggcgt ttttcactta aaggattttc tataatattt cctttagcac
     9781 cgtatccacg gaatgctggt ggaatttcca ttttcataat atcaagctct tcgtattcta
     9841 tgcgtggtaa ggtttcgcct tctacccaaa aagtattggt tcttttcatc caatttaaat
     9901 catctctttt tggataatct tccctataat gcgccccacg actttctgtt cttaaaagcg
     9961 ctccataagc tacgcaaagt gctattttta acattcttgg cactctatac gcttcttcaa
    10021 gctctggatt tgcacaatca agttctttac aatgtacttt aacgtcttga gaatctttat
    10081 aaagtttttc aagttcatct actgcttctt tcaaaccttc acctgttcta aagatggcca
    10141 ccttatccca catgatttct ttcattctgt ttttgatttc aaaaacatta tgtttacctt
    10201 ctttatctac taaagatttt aaatattgat actctttagt taagaagtct tttactacat
    10261 ttgtgtcaat tacttcacca ttatttttac aataatctgc aaaataatct cccactatca
    10321 tacctgctac aacagtttca gcacatgaat tcccacctaa acgattaaat ccgtgcatat
    10381 cccagcaagc tgcttctcca caagcaaaaa gtccgtttaa ccattgactt tcacccgttg
    10441 gtttagttct aattccaccc atagaataat gctgcattgg aagaactggc gcccaacctt
    10501 ttggaccctc atctgctgga tcaataccat taaaagtttt acaaatatct tgtacatcgc
    10561 ggagattttt ttccacatga gctcttccaa gtatagaaat atcaagccat aaatgatccc
    10621 cataagggct ttttacacct ttgcctttac gaatatgttc catcattcta cgacttacca
    10681 catcacggct tgcaagttct tttttctctg gttcataatc aggcataaaa cgatatccat
    10741 ccacatcgcg taaaattcca ccatcaccac gacagccctc agtaagcaaa ataccgcttg
    10801 gcacaatagg agttggatga aattgcactg cttccatatt tgaaagtctg caaagccctg
    10861 tttcaagagc gatggctgca cctgttcctt cacaaattac cgcatttgta gtttgtttat
    10921 aaattctacc atagccccct gttgctatca tggttcctct tgcaatataa gcaatgagtt
    10981 gtccattagt taaatctcta gcgatcacac ctaagcattt tttaccatca tggataattc
    11041 ttactgcttc cattctatca ataattttta cttgatgttt aatagcttca tttgctacac
    11101 cataaagcat acaatgccct gttgcatctg cgatatagca agttctccat tttttagttc
    11161 caccaaaatc tctagcatta ataagcccgt gcgcttcttc tttttcttca atcacagttt
    11221 tttgtgcatt gattacaaca gttcttggac ctttagtaac tctagtccaa ggcacacccc
    11281 aagccgcaag ctcacgcact gcttttggcg cagtttgagc aaacattctt gctacttctt
    11341 gatcacagcc ccaatcactt ccttttactg tatctgcaaa gtgaagatct tcattatcac
    11401 cctcaccttt tgccccattt gctaaacttg cctgcatacc tccttgcacc gctgcagagt
    11461 gagaacgctt cactggacaa atacttaaaa gtgttacact ttggccactc tttgctactt
    11521 caatagccgc tctaagacct gctaatcctc cgcctattac taaagcatca ctatattgta
    11581 tattcataat ttgctccatt gtagtttttt atcatcgcag tagtttgggt ttgattttgg
    11641 tagttttcat aacctatttt tataaatgct gcaagactta acacacctaa aactaggaag
    11701 aaaatactga ttatccattt agcagtttta agctttttgc gactttcttt tacatttttt
    11761 ccttcaaacc aaccccattt aacacaaagt ctataaagcc ctatacttcc atgaagttca
    11821 acacagacta aaagaacagc ataaaaaagc cacataaaat gacttacaac cctatctcct
    11881 gacatatcgc cgctgatttt atctgcattg gttacaataa aaataagatg agcagaacct
    11941 aagaaaaaca taataaaacc tgtaaaagct tgaacccacc ataacgaagt atcgctgtga
    12001 ttcatttttt tactgtgtgt tcttagtatt tgatactgac ggtaattaat aggaaatttt
    12061 ctcattgcaa gtaaagcatg aacgaaaaaa accactaaaa cacaggcggc taaaaatgaa
    12121 gtaagataac tcataacagg attatcgtaa acaaatttta attctaaaaa atgcactaca
    12181 gaattaaaaa aatcctcact gactaaaatt gtagaaacaa aaagcatatg cacccacata
    12241 aaaagaccta aaaaaagccc tgaagcactt tggataaagt ctaatttcgc aggcatttta
    12301 ctttttttgc cctcaatgct cttacccaaa taaccttcga taagctcacg catctttact
    12361 cctttgtaaa aagaaattaa aaaaaatcca tttcattata ttacaaaagt ctttaagata
    12421 gattaaatat ttactttttt aaactttata caaatataaa ctaacaaagc tgttataaac
    12481 attataaaac ttaaaatttg ccccatactc ataccccata aaacaaaacc tataccaaaa
    12541 tcaggctcgc gataaaattc acatataaat cttgccaatg aataagcacc agcatacaca
    12601 agaatcaatt ccccttgaaa gctttgctta aatcttgcta aataaactat aataaaaaca
    12661 acaatacctt ctaaaaatgc ttcataaagt tgcgatggat ggcgcaatac tccatcaaca
    12721 taaattcccc aaggcacatt tgtaatgcga ccaaaaagct cttgatttaa aaaatttcct
    12781 atacgaccaa aaacataagc caatggaaca cttaaagcaa ccaaatcaag aaaaatccaa
    12841 ggatttgttt tatatttttt acaaaacaat aaagtagcta tcaaaaatcc tataattgct
    12901 ccatgataac tcatacctcg aatacctaca aattcaccat taatataagg attaaaaatt
    12961 tgccaaggat gagtaatata atacatagta tttgcatcat aaatcaaaat atatccaagt
    13021 cttgcaccta aaataacccc tatttcaacc catataaaat aactatccaa atgtttttca
    13081 ttaatgtcta gttgaaattt tcttacaaaa aatttagcca aaagcaaagc caaaagcaaa
    13141 gctataacat acataatgcc ataccaatgc acctttaaac caaagatgct aaaagctata
    13201 acattaaaat ttgaataaat atgctgccaa aattccatat atctttccta attttctttt
    13261 ataaaaatat aacaaaaaaa ctttaacttg ctataattaa cacaaacaca ttaaataaag
    13321 gtaaaaaatg aaaaaatata ttttacttgc tagtagtatg ttaattttag cagcttgtgg
    13381 gggtacaagt agtaattttg tcaatgtttc tatgccaaat tttaaacccc aagttccaac
    13441 aaaggttgaa cctattgatt ctggagtaag cattgctctt gtgcctatta atatagaaca
    13501 aaataacaat tattctgatt attttgaaaa ttcagtgctt aaaattcgca tagaaaaaga
    13561 aattgatctt ttaaaacaaa atttagaaga gcagatcaaa accatcgctc aactaaaagg
    13621 ctataaaata gttactacta atccagacta cactcttaaa agttcaatca gtatttatac
    13681 ggaagaaaaa aatgtacaaa aaacaagcaa ttttatgagt ggagattatg taaaatccaa
    13741 tttaggtata aattttaaag gtaaaataga ttttatagat gcacacaatc cacaaaattc
    13801 aaccaatctt tcaagtagca ctaaactaga ttctttagtt gcgcttaact atcctattaa
    13861 aaatgatgat ggggttaata tgtttaaaac tactatctct accgtaccaa ctcaactcaa
    13921 taaaggttta gagcaacctg cttttgaaat tgataaaagt tttttagctt tttataaaaa
    13981 tacattaaat acactttata acaatctacc aaaagcaaca gacataggca aaactatacc
    14041 taatacaaac agtggtttta atagttttga tggcgatgct acctttgaag aaagcttacc
    14101 tcaaacaaat tctaatcaaa ataatacaat tgaaaacgcg cctacacaaa atattcctac
    14161 aaatccatct tcaacaaatc aaaataatca aagtaaaaat caagatgggg tagaaatatt
    14221 tgaatgataa aacttgtggg aaaattaaac tttctcacac aaaaaataag attttcttat
    14281 acaagaaaaa taactatcat tctactttaa aatcaatgcc tgttgcattg cattttttat
    14341 catctctctt ttatcttgta tttcaaaaaa aagttcaaaa gcaaaaactc cttgccataa
    14401 aagcatatca agtccatctt taatttttaa atgatactct ttacacaatc tataaaaagg
    14461 tgtttctctg ccataaatta cctcaaaagc aaatttagct ttaggtaaaa ttctatctaa
    14521 aagctcccta tcacaaggta aattttcatc ttttaatcca gtagaagttg aatttataac
    14581 caaatcaaag tcaaaatctt gcaagttttt ataaagataa gttggataag ctaaaaaatc
    14641 tttaaatctt tctttactac gattagctat atacacttct acgccttttt gttttaatgc
    14701 ataagcaagc gccaaagctg tacctccagc acccaaaatc aaagcttttt ttatattatc
    14761 aaaatcctta atagcttcta aaaaacctaa agcatcagta ttataagcgt aaattttatc
    14821 ttcttttaag cataaagtat ttgcagagcc aatatttcta gcaaaatcat ccttcacatc
    14881 agcaatatct aaagcttttt ccttaaaagg caaagtaata ttagctccac taagtcctaa
    14941 tttaaaaaaa tcttctctta aacagttagc atttcttaaa tgatagcgtg tataaatgct
    15001 atcaagccct aaggctttaa tagcattatt atgcattcta ggcgatttag agtgagaaat
    15061 aggatcgcct ataactgcta aaaatttcat tttaaagtaa aagaaaaagc atcttttgca
    15121 atatccttac ggattttagc aagttctgct gcaatatctg ccttttcaaa tggtcctatt
    15181 aaaaccttgg taatttcttt acttccaact gtagttttat aaagtttata atcataacct
    15241 ttttgcttta cagaagcaag ttcttttgat ttttgatcca aattacttac tgagaaaatt
    15301 tgcacataaa tacccgatgc taaaccactt ggatgtacag gtttagcatc aacattttta
    15361 aataaatcat ttgcattttg ttctttttta ggggtttgtt ttgcactttc tttttctttt
    15421 tttacagctg tttgtttttt tgcttcttct ttagattttg cagtttgtgt tacttcttgt
    15481 ttaggagtac ttgcttgtgg agtggtattt gctgaagtag ttgctgttgg ttctgctgga
    15541 acttcttgat caggcatagc aaaatttgta gtatcattgt tatttgaact agaggttgtt
    15601 gtattttgag ttgtattttg ttcatcttga aattgttttc ttaatgcctc aaattgatct
    15661 tttgctgaag tattatctgt aattggcata ctttcaaaag aagtatcatt gttattgtct
    15721 tgagttgcta taggttcact tggcaataca ctttgatttt gcgtattttc atcaccacta
    15781 ccattaataa gcttcataac tatcatgata gctaaaaaca aaataactaa agcaataact
    15841 cgtaaaagaa ttttttttac tttttcactt ttattacttt tttctaaaat aatatcatca
    15901 aattcatttt tttgattttc cataatttgt cctttcttac atatgcttag accaagaact
    15961 tcctcgttct ttttgataaa cctcataagg caatattaaa atattaaatt ccctaggtac
    16021 atccatgcta ggaaacacct tccattctac tggcatttta cttgcaaaca tcattgaaag
    16081 tttagacgct aaagaataac cttcgtttaa cgccgtgtgt cctttgtgaa tataaagatg
    16141 taaatgtcct ggagttttag tcttataggc tgtgaaattt ataaaacctt cttctcttaa
    16201 aataagttgt gcacggtgat aaaatctttc agcattaaaa ccattataat caaagacaat
    16261 attttctact ttattatctt ttgttattaa atcatgagcg acaacaattt ttttagcagc
    16321 gtgttctctc atgacattta aatttaaagg agcatcaact ctttcaaatt tatcaaaaaa
    16381 taagcgacct ctatgtgtaa ttttatttac aattttatcg cgtcttatat aataatgatc
    16441 gccaattatt ttaattagcg acatatccat tggtgaaatc aaaacatagc cctttcataa
    16501 ataataaaat tacttgcaag tttttttaat tcttgtttaa tattctcttg taatttttca
    16561 ttattaacat catctaaaat atctgcaata taatttgaca caatttccat ttctttttct
    16621 ttaaaacctc tggcagtaag ggctggagtt ccaagtctta atccacttgt gataaaagga
    16681 cttctaatct ctcctggaac ggtattttta tttgcagtaa tacctgcatt tccaagagct
    16741 aaatctgcat cttttccact aaattcacga tctaaaaaac tcattaaaac aaggtgatta
    16801 tccgttccat cgctaacaag tttaaatttt ctatccatta aaacattagc taaaacttga
    16861 gcattagttc ttacttgttt tgcataaact ttccactcat cgctaagatt aaatttaaat
    16921 cctactgctt ttgcagcaat tacatgcatc aaaggaccac cttgaatacc tggaaaaatg
    16981 gcagaattaa tttttttagc aagctcttca tcatttgtca taataatacc acctcttggg
    17041 ccacgcaaag ttttatgtgt agttgagctt actacatgag cgtatggaaa aggacttgga
    17101 tgctcacctg ccacaacaag acctgcaata tgtgctatat cagcaaaaag ataggcacct
    17161 atttcatcag caatttctct aaatttagca aaatcaatca ctcttgcata agcactagct
    17221 ccacaaacta taagttttgg tttttctttt ttagcaattt ctcttacttt ttcataatca
    17281 attcttccat caagttctac gccgtaaaaa cagctttcat acattttgcc cgaagaactt
    17341 acttttgcac catgagttaa atgtccgcca tgacttaaat ccattcctaa aattttatca
    17401 cctggattaa tcaaagccgc ataaacacct tgattagctt gagaacctga attaggctga
    17461 acattagcaa atttacaatt aaaaagtttt ttacatcttt caatagctag agtttcaatc
    17521 tcatcaacaa attcacaacc accataatat cttttacccg gataaccttc tgcgtatttg
    17581 tttgtcaaga tacttcccat aacttccatt acttcaggta aagtgaaatt ttcactcgct
    17641 atcatttcaa gaccttcaca ttgacgctct aactctttgt ttgttaaatc aaaaatttct
    17701 ttatcaaaca tttctaaact cattctttct cctttagttc tgattttaat ggacgcattg
    17761 caggaaacaa tatcacatca cgaatggatt ttttatttgt caaaagcata acaagtctat
    17821 ctatacctat gccctgccct gccgttggag gcattccata acccaaagca tttacaaaat
    17881 cttcatccat ttcacaagcc tcttcatcgc ctgcattttt agcttcaatt tgttttaaaa
    17941 atctctcata ttgatcaaga ggatcattaa gctcattaaa accatttgcc aattctcttc
    18001 cgcaaataaa caactcaaat ctctcagcaa tctgagaatc ctcatcgcta cgtcttgata
    18061 aaggacttat ggaaatagga aaatcaatca caaaagtagg attgatcaat ttttcttcca
    18121 cataattgtc aaaaagttca gcttgcaaat gtccaagttc aagcttttca ttcgcttcaa
    18181 aaccatctgc ttttaattta gtaagaattt tttccttatc ttcgattaaa tccctatcta
    18241 aaccaccata cttacaaagt gcgtctttat aggttattct ttcaaaaggt ttagaaaaat
    18301 ttatcatttt tccatcaaat tctattgttt ttcctaaatt aagtttatcc aaaagtaaag
    18361 caaaaagttc ttcggttaaa tccattaaat ctttataatt atgataggcc caataaaatt
    18421 ctatagttgt aaattcggga ttatgagtta aatccatacc ttcgtttcta aaacaacgat
    18481 tgatttcaaa aaccgcctca aaaccaccta ctataagtct tttaagataa agttctggag
    18541 caattcttaa aaatctttct acgcctaaag aattatgaaa agttacaaaa ggcttagcgt
    18601 ttgctccacc tgcaatcgga tgcatcatag gagtttctac ttctaaaaag cctttatttt
    18661 caaaaaaatg acggattaaa ctcaccactt tagaacgcac taaaaaatct tttctaactt
    18721 cgacattcat tatcatatca acataacgtt tacgatatct ttgctcaata tctgttaatc
    18781 catgatattt ttcaggtaaa ggaacaatag cttttgtagc gagttttact tcacttgcat
    18841 gtaaactaaa ctcacctgtt ttagttacaa aaggaaaacc tttaaccaaa acaatatcac
    18901 ccacctctaa attctttttt aaaatcgtat aaagctcttc gcctacgcta tctttactaa
    18961 aataaatttg taaatttgta tcctcatctt caatgtttgc aaaaatcgat ttcccagcta
    19021 tacgcaaaag tttcaaacgt cctgcaacaa cagcattgac actttcatct cttttttcaa
    19081 cttgctctaa aatataagaa aatttatcct taaaagtctt taaagacatt tctttttcta
    19141 aaaaatgagg ataaggattg atccctaaat tttttaattc cttagctttt tctattcttt
    19201 gctgctctaa aatattatca aacatttata tttttacctt tgctttttga ttattacaat
    19261 caccacaaac accataaagc tgcatcaaat gccctgtaag tttaaaacca tgttcttttg
    19321 caatcaaggc ttgctgtctt tctataatag gattttcaaa ttctataatt tttccgcaat
    19381 ttttacatat catatgatca tggtgaggtt tattggcaag ctcgtatttt ttacctgctg
    19441 aaccaaaaga aatggaagtt accatttctg cttcttcaag caaatttaaa gtacgataaa
    19501 cagttgcaat tcctacattt aaatcaggtt cagcttgttt gatttccata tataaacttt
    19561 cgggtgtgta atgagtatca ctgtgataaa gagtttttaa aagcacttct ctttgcttag
    19621 tatatttaag tccgccttgt cttaatattt ttttaaatct ctcaagtaaa acatcatatt
    19681 ccacattttc tatcagcata tcactcccct ttttgagtat tgtttaaatc acttacaata
    19741 tcttgcaact tttcactagc atgatctaga ctattttctg ttaaaggttg attcataata
    19801 aaagatccag tttctttaag caaattcaaa gtatagctat ttttagcaaa attatctaat
    19861 ttatcattta aaaaatcgat tcttgctaca caaaaaacta aaattgcaaa aattaaaaag
    19921 atttttgccc cgccaaatat aaagccacca atacgatcta aaaaacctag gccacttaat
    19981 ttaatcaact tagaaagaaa attacctgcc aacaaacaag ctatccaaaa aataattaat
    20041 atggccaaaa atccagcaaa tccagctaag ctttgatttt ctatcttata aaaagtactt
    20101 tgtataaatt cagctgcttg agttgcatat tttgaagcaa taaaaacacc accaataata
    20161 cccaaaagcc caaaaatttc ttttatcaaa ccattgataa tacccttaag ccctaaaagc
    20221 aaggtaaatc ctaaaataaa agcatcaaac caataaaaat tcatttcaat cactctctga
    20281 ttttttttgt tttaaattta ttctacaaat aagcactaaa tgctaagtta atcattctat
    20341 gattttagga acaacaaaaa aatgttcttg tttttttgga gcacaatcca aaacctcatc
    20401 aataacattg ctatttctta tctcatcaat cctcaaagga gctccacctt ttatagtact
    20461 cacagtaatc tcttgggaat ctagatcaag ttcgtttaat ttttcaacaa aattcacaat
    20521 ttcacttaac tgtgcaatgg tttcatttct gttttttgtt atttgtaaag cacttaattt
    20581 ttcaagcttg cttaataatt tctcatctat ttgcatttct taaaccttaa taaaaaagtt
    20641 aaaattttga aaattatatc ataaaaagct ttaaattgtt taggatattt tgcaatttat
    20701 atgatacaat actataattt ttctatacaa aaataaaaat attttttcaa ggataaattt
    20761 tgggactaaa agataattta aaagctgtta aaaatgaact taacacagaa gaacaattta
    20821 tagaaaattt tatcaaagga gagagattta tacgcaagta taaattttat atatctgctg
    20881 ttgtgataat tttagttgct tggtttgctg gaaattttat aatctcaaaa ataaacgatt
    20941 ataaaacaaa agaagcaaat gaaatttatg ccaatctaat acaagatcct agcaataaaa
    21001 atcttttaga acaacttaaa aataaaaata ccaatcttta cgctatcttt ttactaaaag
    21061 aaaatattaa tgattttaat aatacaactc tccaaaatga actaaaacaa atttataata
    21121 atgctcaaac aaacacttta cttaaaaata ttattgcatt atctttaggg gataaatcga
    21181 tatttttaaa aaattatgat aaattattag aagcttacaa acttttagag caaaataaaa
    21241 tcgaagaagc taatgtttta ctttctcaga taaaagaaaa ttcaagttta aatcaaatag
    21301 ctaaaaacct caaacattat caaggcatta cacaatgaaa aaaatatttt taacactatt
    21361 ttgtttaata tttctatgtg cttgtggcac caaaagacaa tattttgaac caaaacaaac
    21421 cgatggagat ttaagtcata atagcaattt aaaaagtaaa atcgttgatt ggaatctagt
    21481 ttctgcaaaa cttagcaata atacaactat cttaaaaaat aatatctcca tagacaagtt
    21541 taaacttcct aaaaattata tgcttctagc ttatcaagat ggggaatatt ttactgcaga
    21601 taataatgga aatttaaaaa tttttgacaa ttcttataat gaaatttata attttcaatt
    21661 tgacgctagt gttgtaggag tagcttctaa tggagatgat ttagcccttg tacttgcaaa
    21721 caatactata gttcttgcaa atcgttcttt gggtattaaa ttcagtcaaa ccctaacctc
    21781 agctccagcc caagacagtc gtaccgctaa tcctatattt ttagacaata tcatcgttta
    21841 tccaacacta gatggtaaaa ttttaattct ttcaagaaac aatcttcaaa tcattaaaga
    21901 tgtggttatt tcagcagaaa attttttcaa caatgtaatc catctaagtg taatcggaga
    21961 taaacttata gcagcaacag ctaaaaaaat cattgttgta agccctgcta gaactcttta
    22021 tcttgacgct gacataaaag atgttgcact tagcgatgat ggtattttta tactagaaaa
    22081 agatggcact attattaaaa ctgattataa cttaagaaaa attgcggaaa aaaaatttga
    22141 atttgctatt tttgtaaaaa gcaatatata caataattat ttatatattt ttgaaaaaac
    22201 aggctatctt atcaaaatga atctgaattt agataatgca caagtattta aactttcaga
    22261 agctgttgat aaaatttctt tcatgggaaa tggtaaattt tactacggag ataaaatttt
    22321 agatttgcta tgataaaaat tttagaacaa acaataaagg ctttaaaatt aaatttaaag
    22381 ccctatgact taagtatgtt gactagaaaa aaaagttata tttgtgctaa agatcaaaat
    22441 aacattcttt ttatgtatac aggaaaaaca aaatttttaa tgaaagatgc cttattttta
    22501 gaaaatctag cacagcaaat taacataaat aacaaatatt tttttagtat ggcttctctt
    22561 tgctctaaag caaaaaatca tctagaaatg aaaggattta atatctatgt tgctctgtga
    22621 tattgggaat tcaaatgcta atttcctaga tgataacaaa tattttactc ttaatataga
    22681 tcagttttta gaatttaaaa atgaacaaaa aattttttat atcaatgtca atgaacatct
    22741 caaagaacat ttaaaaaatc aaaaaaaatt tatcaatctt gaaccttatt ttttatttga
    22801 tacaatttat caaggattag gaatcgatcg catagcagct tgttatacta ttgaagatgg
    22861 agttgttgta gatgcaggta gtgctattac aattgatatt atttctaatt ctatacatct
    22921 tggtggtttt atcttgccag gtattgcaaa ttataaaaaa atttatagcc atatttcacc
    22981 acgattaaaa agtgaattta acactcaagt tagtcttgat gcattcccac aaaaaaccat
    23041 ggatgcttta agttatggtg tttttaaagg aatttaccta ctgataaaag atgccgctca
    23101 aaataaaaag ctttatttca ctggtggaga tgggcaattt ttagcaaatt atttcgatca
    23161 cgcaatttat gataaacttt taatctttcg aggaatgaaa aagattataa aagaaaatcc
    23221 caatttactt tattaaaaat gttacaaaaa ttctcattaa tatcaaacct taatgaaatt
    23281 taactttttg taaaacaaat tcaattaaac ttctatttag aaaaaagttt attaaaataa
    23341 aaaaaggaaa aacaatgagc caacaagaat ttgatgtgct tgtcatcgga gctggaattt
    23401 caggagcagc attattttac gagcttgcaa gatatacaaa tattaaaaat attgctttga
    23461 tagaaaaata taatacagct gcaacattaa attctaaggg aacgagtaat tctcaaacca
    23521 ttcattgtgg agatattgaa accaattata ctttagaaaa agcgcgaaaa gtaaaaagaa
    23581 cagctgatat gatagttaaa tatggactca tgcaaaatgc gcaaaataat ttcatgtttt
    23641 ctcatcaaaa aatggctcta gctgttggag atatagaatg tgattatatg aaaaaacgct
    23701 atgaagaatt taaagaactt tatccttata taaaattttt cgataaagca aaaatcaaac
    23761 aaattgaacc caaagttgtt ttaggagaag attgcaatca agatagacct gaaaatatct
    23821 gcgccatggg tgttgaaagc ggcgaggttt ttacaactgt agattttggg aaaatgagta
    23881 taaatctaat agaacaagct caaaaacaaa ataaaaatac tttcgttgcc tttaatcaag
    23941 aaattattca catagaaaaa aaggatgata tttttatatt aaaaacctca aatcatcaag
    24001 aataccatgc caaaagcgta gttgtcaatg ctggagcgca ctctttatat ttagcacata
    24061 aaatgaactt aggtatggat aagtcttgtt ggcctgttgc aggaagtttt tatttaacca
    24121 aacaaaaact tttaaatggt aaggtttata tggtgcaaaa tcctaaactt ccatttgcag
    24181 ctcttcatgg agatcctgat ttgcttgctg atatgaacac ccgctttgga cctaccgcac
    24241 ttgttattcc aaaactagaa cgttatcatg gtctaaaatc agttccagaa ttttttgaag
    24301 cactaaaact tgataaaact gttttaaaag taacttttaa tatgtttaaa gatgcaacaa
    24361 ttagaaatta catcttttat aattatcttt ttgaactacc ttttgttgat aaaagcttat
    24421 ttgttaaaga tgccaaaaaa atagtcccaa gtcttaaagc aagcgatatt tattatgcga
    24481 aaggttttgg aggcgtaaga ccgcaagtta ttgataaaac taaaggagaa ttaatgctag
    24541 gtgaagcaag catcacagaa acccctggta ttattttcaa tatgactcca agtcctggag
    24601 caacaagttg tctaggaaat gctgaaagag atgcaaagct tgtatgtaat tacctaggaa
    24661 tggaatttaa cgaagataaa ttttcttcag aattattgta atcattttgt ttctattttt
    24721 agctacaata atttcaaaag gagtttacca tgcttaaaaa aacaaaaatt gtagccacag
    24781 taggtccagc aagtgaaaag gaagaaattc tacgccaaat gattatcaat ggtgtaaatg
    24841 ttttccgttt aaacttttct catggaacac atgagtatca taaaaaaaac ttagatacca
    24901 taagaagagt agctaaagaa ttgcatactc gtattggaat tttacaagac attagtggtc
    24961 ctaaaattcg tacaggtgaa cttaaagaac catttgaatt aaaaaagggt gatagacttg
    25021 atttttatcg tgaaacaatt ttaggggaga agattgctca aaatcattat aaaatcagta
    25081 tcaatcaaaa atccatttta gatatgttaa aaattgatga atatatttat ctgtatgatg
    25141 gatcaattcg tgctaaagta gtaaatatag ataatcaaaa aattgaaacc attatagaaa
    25201 atgatggttt tttaaactca aataaaggta ttaattttcc gaatactaaa atcaatattg
    25261 atgttattac acaaaaagat aaaaatgatt tactttgggg tataaaaaat gaagtagatt
    25321 ttttagcaat atctttcgta caaaatgcgc acgatattga tgaagttcgt gaaattttag
    25381 cacaaaataa cgcaaaaata tctatttttg caaaaattga aaaatttgat gcagtagaaa
    25441 atattgatga gattattaaa tctagcgatg gtataatggt tgcaagagga gacttaggta
    25501 ttgaggtacc ttattataaa gttcctaata tccaaaaaga aattatacaa aaagcaaaca
    25561 atgcctctaa gcctgttatt actgcgactc agatgctttt ttcattagcc aaaagcaaaa
    25621 ccgccacaag agctgaaatt tcagatgttg caaatgctgt tttagatgga acagatgcag
    25681 taatgctaag tgaagaaagt gccgttggta tagatcctgc aaacgctgtt gatataatgt
    25741 gccaaactat aatagaaaca gaaaaacgct atccatataa caaatttaat gattttaatg
    25801 atttagacaa tacagataaa atcatgcgtt cttcagctca tcttgcaaca gatcttaacg
    25861 ctgatgctat tttttcttta acaagtagcg gaaaatctgc tattaagatt gcgagatatc
    25921 gtccaaatat agaaatcata gcagtagggc attctgaaaa aaccttaaac tctttaagta
    25981 tagtttgggg agttaatcct gcaatcttgg ttaacaaaag taatgaactt acagaattat
    26041 taaaagactc tgtaagatca agtgttgaaa aaggttttat ggatgaagat aaatgctatc
    26101 ttctaactgc aggctttcca acaggagtag aaggtactag caatcttatc cgcattctca
    26161 ataaagagca aattgcttat tatctacaat aaaacattaa attcctttga aaataaggaa
    26221 tttaatgtcc ttataaattt tttaagtcaa aagtcgatat aaattaaagc ctcacacaaa
    26281 ggagcaaata tgcaagtgaa tactttttca aatatcgcta gcatggcacg aacacaagtt
    26341 agcaataaga aggcagatga tgctaaggaa aacacaaaag acaaaaatgt tcaaagtgct
    26401 aattctagca aggatgtaga taaaaatacc cttgaaaaat taaatgcact tggtggaaaa
    26461 ggcattacac aaatttacct agttcagttt caacagcaaa caatgaatgc tgtaataggt
    26521 tcgagcaatg cccaaactgg actagatagt cttttaaatg gtgccaattt agatactgcg
    26581 aaatctatac ttacaaatat tgattttgca tccttaggct acagtagcaa aaatccactt
    26641 gatatgaata cagatgaact tcaacaactt gtaagtgaag atggtttttt tggagtggaa
    26701 aatacagcca atcgcatcgc ggattttgtt attaaaggcg gtggcgacga tgttgaaaaa
    26761 ttgaaaaaag gtcttgaagg tatgaaaaaa ggatttgagc aagcagaaaa aatgtggggt
    26821 ggagaacttc ctcaaatcag tcaaaataca atagatgcgg cacttaaaaa agttagcgat
    26881 cgcattgatg aactaggcgg aaaaactcta gatcttcaag cttaactaaa aatgcttaga
    26941 aatttctaag catttttagt tgttattaat atcaaaagta aaaaattcac tcttaaaatt
    27001 attaggtaaa gttttatact gagatatcgc agcttcatag ttctttactt cttgatacaa
    27061 cataccaaga gctgctttac tctctttgtt atttttatct gtaagtttag aaagctgcaa
    27121 aagcgctata gctgaatttg gattatttgc acctacggct gctacggctg ctaaaaataa
    27181 agttttagta tctttagctc cataatcatc aatcaaagaa ttataaagcg cataagcctc
    27241 ctcgtattgc tgtgcaaaaa tatccaaata agctaaagtt tgtaaaatac cctcatcttt
    27301 tgctcctgaa acattaatca actctttaaa tttctgtctt tctaaattta aaagccctgc
    27361 aatatgcatt aaattaacat aaaattccct agctatattt ggcccaccaa aaacactacg
    27421 ataatcaagt tttaaatttt taaaatgaat ttgagcattt tgag
//
LOCUS       DAPIVO010000015        26834 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.015, whole genome shotgun sequence.
ACCESSION   DAPIVO010000015 DAPIVO010000000
VERSION     DAPIVO010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 26834)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26834)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26834
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.015"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            66..446
                     /locus_tag="RJ239_000619"
     CDS             66..446
                     /locus_tag="RJ239_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330754.1"
                     /translation="MLIIGHKLLKNLDFSFIESVEEVKDNKVYCIVYDEKLISYLSQN
                     DFEFAILVQNKDEIFLANALGAKFLLCNDKKLAKFASKVAEFYVFDSRVLMIVDKLEN
                     FKKFYKLKIDGIILKDNIDNFPKN"
     gene            491..4003
                     /locus_tag="RJ239_000620"
     CDS             491..4003
                     /locus_tag="RJ239_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-[ACP]--phospholipid O-acyltransferase"
                     /protein_id="HDV7330755.1"
                     /translation="MQKKSFLKIYGLIPFLLIAFINAFVDLGHKIIIQNTIYKAYEGS
                     EQLFLNAIVNALILLPFILMLSPSGFLADKYPKNIVMKISAIFNVILTLIICICYYSG
                     AFWMAFIFTFIMGAQAAIYSPSKYGFIKELVGKDFLAMGNGVINAVSIVAILAGMALF
                     SLSFESLYSSMYNQTDEILKEVAPLGIVLILFSCIEVFFAWRLPKLKQTNKDLVFNKK
                     DYIRGKLLINNLKLVFKNKTIWLCIIGISFFWAISQLYLVSFPVFAKNELFIENTFYV
                     QISLAFSGIGVILGSLVAGKFSKNYIELGFIPLGALGMFLMAFLMPYFISLLSYSFLF
                     FFFGFCGALFIIPLNTLIQFHAKENELGQILAGNNFFQNIAMLGFLLLATLFVKFEIN
                     VIYLFYFIALVTFIGSFYILLKLPFSLVRILLSIAFLQRYRLLVEGFENIPEKGGALL
                     LGNHISFIDWAVVQMAIPRKIYFVMERSIYSKWYIKIFLDKFGIIPVSSTGSKTSLEL
                     IAKHIKEGNLVCLFPEGTLSRHGQLNEFKAGFELACECLSEDDGKIIPFYIRGLWGSA
                     FSRSDEEFSARNRTLNKRKIAIAFGKAMPLHSKKDEVKAKVFELSFMAWKSQCEAMHT
                     IARAWIDTAKKNLNQIAIIDTLAGDISYRKMLTLSLFLNFFIKRKSKELNINLQRGSY
                     APKEEAIGILLPASFASSLTNLSVLIAEKIAVNLNFTAGEKALKAAIKNAQISQIYTS
                     KTFLEKLANKGINLNFDTNIHLIYFEDIVEDFKMQKTKIFSMMLAVSIIPSFILKSIF
                     TPSKNNLAIAAILFSSGSEGSPKGVMLNNRNILSNIAQISDVLCTRNNDVILSSLPPF
                     HAFGLTVTTFLPLLEGIKSITFSDPTDALGVAKAVAKNNVTIMCGTSTFLGIYARNKK
                     LDALMFESLRIVVSGAEKLKNEVRTTFEMKFKKSIFEGYGATETTPVASVNLPNHFDV
                     DYWLIHRANKEGSVGMPLPGTAVRIVDPNNYENLKTNEDGLILIGGHQVMVGYLNDKE
                     KTDEVVKEIDGIRWYNTGDKGHLDEDGFLYIVDRYSRFAKIGGEMISLGAIEEEIAKF
                     IDTEVVKFCATSLEDEKKEEQIVLLIECNNEIFEGVCEAIKNSNIPTLFKPRYYFQIE
                     KIPLLGSGKVDLKKVKELAKNLAI"
     gene            complement(4011..4922)
                     /locus_tag="RJ239_000621"
     CDS             complement(4011..4922)
                     /locus_tag="RJ239_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HDV7330756.1"
                     /translation="MFVFIPLFTIFILLAGGYFAKRIGVLKQKQARTFLDFAIIFALP
                     CLIFDKAYHLNFDFSLIIFIFIGLFSCILAAFFAILIGKVFHFSKVTLVSMFLLSCFG
                     NTIFVGMPIVAGIFNDPQFSAEVIFYDALATTLPISLFGPFILSLGNGEKVSLLANVK
                     KILSFPPFLALLFGFLCKLITLPEFIFSPIRLFGASATPVALFAIGLGLGFMAIKTSY
                     KPTIVVIFAKMILAPLFFVFCLKIFNLELKDSTIVAIIESAAPTMTLAGAMVMKAKLD
                     SNLAVSAVAFGVLFAFVSMPILIWTLL"
     gene            complement(5119..5204)
                     /locus_tag="RJ239_000622"
     tRNA            complement(5119..5204)
                     /locus_tag="RJ239_000622"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5168..5170),aa:Leu,seq:gag)
     gene            complement(5239..5577)
                     /locus_tag="RJ239_000623"
     CDS             complement(5239..5577)
                     /locus_tag="RJ239_000623"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HDV7330757.1"
                     /translation="MKKVLFLLLACTAVAFAAETNAPVEQEAINVWIKAFSVLAAGLG
                     LGVAALGGAIGMGNTAAATIAGTARNPGLGPKLMTTMFIALAMIEAQVIYALVIALIA
                     LYANPFIVLQ"
     gene            5810..7144
                     /locus_tag="RJ239_000624"
     CDS             5810..7144
                     /locus_tag="RJ239_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDV7330758.1"
                     /translation="MSSKFSKIGFILAVAGSAVGLGNAWKFPTLVGQSGGSAFILLYI
                     ILTLGVGFVIFLAELSIGKISEKDPVNAYEKLAPSNKKAWSYVGFTMVGAILIVSFYT
                     LVIGWIVKYVFLSITGNLPMDLEVSKAQFGFFISEDFLSQFICFTLVFLCVFYIVSKG
                     VKNGIEKLNVWMMPSLFILLILMLVYAISKDGFIMAVKFLFVPDFSKINTSNVLEALG
                     LAFFSLSLGVGTIITYSASLPDKTNFITSTLNIIFINLLVGLLMGLVVFTFIFEFGYN
                     PNQQGPGLVFISLATLFEKIGVIGCIFGAAFFISLIFAGITSAVSMIEPFTFYLINTF
                     GMSRKKALILIGIVVYILGMLCILSSLKSTQFGFFGMSFFDLLDSVSSKVIMPLGGIL
                     AAIFVGFVMKKEALKILFKPYMRGIFFELWYVFLRFISPLAVVIVMIAAFLK"
     gene            7157..8497
                     /locus_tag="RJ239_000625"
     CDS             7157..8497
                     /locus_tag="RJ239_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDV7330759.1"
                     /translation="MRTYFSKIGFVLTVAGGAVGLGNAWKFPTLSAENGGFVFVLLYL
                     FFTLTIGFSIFLAEVAMGRLSKSDLANAYSNLAIKYGNRWRYGGVFMLGGIFVLSFYL
                     VIMGWVLKYTVVSLYYLPKTLDEAASNFQNLITTNLTSSVFFFTLSFFLTLLIVSKGL
                     IKGIEKLNVVIMPSLFLMLVFMLFYCMGFKQGFANAFSYLFYPDFLHFKFSSIAEALG
                     LAFFTLCLGIGCIVTYSSALDKKTNFIKSSVYIVLINLLISFIMGLIVFTFIFEFGAD
                     PHTQGVGIVFISLMSLFNQLGALGYIFAFCFFLALFFAGITSAVSMIEPLTFYMINNY
                     QISRVKALFLIGLFVFVFGICCILSLNLNFFSMFSFFGKDFFTLLDKLTSNFLLPLGA
                     IVCSIFVGFFMNKKQIYKIFSKFISRKIFLIWLFFIRFISPIAIILVMCYQIFV"
     gene            8529..10328
                     /locus_tag="RJ239_000626"
     CDS             8529..10328
                     /locus_tag="RJ239_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin attachment protein"
                     /protein_id="HDV7330760.1"
                     /translation="MAKKFIDVMDTSFRDGFQSVYGARVLMDDFFPAVEAAKEAGITH
                     FEFGGGARFQSLYFYLNEDAFTMMDRFRAIVGKDANLQTLARGVNTVTLDTGSSELID
                     LHAKLFAKHGTTTIRNFDALNDINNLKFSGECIAKHGLKHEIAITLMDLPPNCKGAHD
                     VPFYEKILKEILAAEIPFHSICFKDASGTSNPNKIYETIKMARKILPQDMHIRLHTHE
                     TAGVSIACYLAALEAGVDGIDLAAAPVSGGTSQPDILTMMHALKGKDYDLGGLEEEKI
                     LKYEEVLKDCLKEYFLPPEATMVNPLIPFSPMPGGALTANTQMMRDNNILDKFPQVIH
                     AMREVVEKGGFGTSVTPVSQFYFQQAFNNVMFGSWKKIAEGYGKMVLGYFGKTPVAPD
                     ANIIELASKQLNLEPTTELAINIADKDESKSIAYTKTLLEKEGIETSEENIFVAAACK
                     EKGIAFLKGEAKVNIRKLASMPKPMSADENKFTVAVNGNKYHVEVSYGFDKDVNVKSV
                     KKVEENKNIISSNSTSSVDAENEVLAGISGNVFKIYVNEGEEVKSGQAIMVLEAMKME
                     IEVNAPKDGIILELCIKIGDTVNEGEVLAIYKN"
     gene            10341..11915
                     /gene="pckA"
                     /locus_tag="RJ239_000627"
     CDS             10341..11915
                     /gene="pckA"
                     /locus_tag="RJ239_000627"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HDV7330761.1"
                     /translation="MKKFDKLGLDNIKEIFHNLSYDELNAHEKANNEGLSTDNDTFCV
                     DTGIFTGRSPKDKYFVKQDPSSKYIAWGKVNQPITKELFDKLLTKAKQELSGKKIYVQ
                     DVFCGASLQSRKAVRFVTEIAWQAHFVKNMFIRPSQEELENFKADFIVYNACKCINED
                     YKQDGLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANV
                     GEKDDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLDPE
                     HEPEIYGAIKRNALLENVVLRADKSVDYADASKTENTRVSYPIEHIENHEPSLKAGHP
                     KNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEP
                     FMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGS
                     ITKCEFENFEVFDLAIPKALEGVESVLLNPINTWLDKNAYIATRDKLAHMFIQNFKRY
                     EDVKEGIEFSKFGPKI"
     gene            11925..13307
                     /gene="argH"
                     /locus_tag="RJ239_000628"
     CDS             11925..13307
                     /gene="argH"
                     /locus_tag="RJ239_000628"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HDV7330762.1"
                     /translation="MKNEMWSGRFSGASDELLKEFNASLNVDKTLFNEDIQGSIAHAT
                     MLESCGILKKEELDAIIKGLEQVRSEIEQGKFIFDIKDEDIHMAVEKRLSEIIGSEIG
                     GRLHTARSRNDQVATDFKLFVKKSHIELIKLLKELIQTMLEHAKVHKKTIMPSFTHLQ
                     HAQPVSFSFYILAYAFMLMRDIKRLQNSLELADFSPLGSCACAGTSYATNRELSAKIL
                     GFKDIMPNAMDGVSDRDFALDLLYDIAVIFTHTSRLCEEMILFSSSEFSFITISDSFS
                     TGSSIMPQKKNPDVCELIRGKTGRVYGNLISLLTIMKALPLAYNKDMQEDKEGIFDSV
                     KTAKDSLIILNAMLKEIQINKENMLNACKKGHLLATDLADYLVREKNIPFRKAHFIVG
                     NVVAQAEAQGIDISEIKDLSKIDPVFDEKAMELLNFEFSLNSKQSEGSSSIASVEKQI
                     QILEGFIQNL"
     gene            complement(13329..14432)
                     /gene="ychF"
                     /locus_tag="RJ239_000629"
     CDS             complement(13329..14432)
                     /gene="ychF"
                     /locus_tag="RJ239_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HDV7330763.1"
                     /translation="MSLSVGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAM
                     VEVPDLRLNELAKIVKPERIMHSLIEFVDIAGLVKGASKGEGLGNKFLSNIRETEVIL
                     HIVRCFDEENITHVEGGVDPLRDVEIINTELILADIEQLSKKIEKLTKEAKANQKGAK
                     ESLELANSLLDHLNKGLAASSYPEKESEIYQALIKELRLLSAKEVIYGANVDENGISE
                     DNDYVKALKEYAKKNDHEVIKLCAKIEEELVGLSDEESHEFLSSLGVNESGLDQIIRT
                     AFAKLGLISYFTAGVVEVRSWTIKKGWKAPKAASVIHNDFEKGFIKAEVISYEDYIQY
                     KGENGAKEAGKLRLEGKDYIVLDGDVMHFKFNV"
     gene            complement(14429..15880)
                     /locus_tag="RJ239_000630"
     CDS             complement(14429..15880)
                     /locus_tag="RJ239_000630"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HDV7330764.1"
                     /translation="MKFELNDKKLDAIKADFELVFIQDKNLKIFNKEKDFFKLNNYKG
                     EGALLDLNNKKLYLELKSLAYEDIRLSLCTAYKTLEKLNIKSVKLPSIIGDCVVRSFA
                     SLVEGVLFGAYKFDKYKSEKKTSTLEKFIISNEELNGKKFNKDEAKIGLERGEILANA
                     TNFTKNIVNEIPEIYTPLKMAEDAQNLAKENKNIICKIYDEKFLAKEKMNAFLAVNHA
                     SVHPPRLIHLSYKAKNAKKRVVFVGKGLTYDSGGLSLKPADFMLTMKADKSGAAAAMG
                     IIKAVAELALDLEVHCILGATENMIGGNAYKPDDVLISREGVSIEVRNTDAEGRLVLA
                     DCLSFAQDLKPDLLIDMATLTGACVVGLGEFTSAIMGNNEELQNDFYLSSKKSGEYTT
                     ILHFNPHLRELIKSNIADVSNTASSRYGGAITAGLFLDKFIRKEYKDKWLHLDIAGPA
                     YTEKSWGYSSFGAGGAGVRMCVNYLIQILRKAK"
     gene            complement(15877..16473)
                     /locus_tag="RJ239_000631"
     CDS             complement(15877..16473)
                     /locus_tag="RJ239_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDV7330765.1"
                     /translation="MEEFLKNLLYQYKDLAYIIIFLWCILEGELALILAGIFAHQGHV
                     NLGFVIFIAGLGGFVGDQIYFYIGRYNKCYIQKKLKTQRRKFAVAHLLLQRFGWPIIF
                     IQRYMYGFRTIIPMSIGITRYSAKKFAIINLFSAWVWASITILLAWYFGEQIWKMVTW
                     AEEHWYYAAIIIIAFLSLLLFGFKQMEKAILKDKRKKS"
     gene            complement(16492..17040)
                     /gene="apt"
                     /locus_tag="RJ239_000632"
     CDS             complement(16492..17040)
                     /gene="apt"
                     /locus_tag="RJ239_000632"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HDV7330766.1"
                     /translation="MIKLTQEEQKYLLDSIRIIPDFPKKGIIFRDITTLLNNKEALNF
                     LLKHLKERYKDYNLDFIAGTESRGFIFASMICAKLNLPFVPIRKPGKLPFETFSCEYD
                     LEYGSDKVELHKDAFKNIQNARVLLVDDLIATGGTAIASYELIQKAGAKCVEACFLIN
                     LKDLNGANKLEKLTSVYSVLEI"
     gene            complement(17037..17369)
                     /locus_tag="RJ239_000633"
     CDS             complement(17037..17369)
                     /locus_tag="RJ239_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330767.1"
                     /translation="MFTNWLVLTILICATIYLIVMLFYYKTLLNKEKTSKDFIKNNLD
                     DTEIVIRKLQIQLQRSLGNIDILTEELNKIKADLTSLRTRNSQYRLENDKLRQRIKEL
                     EAKIEALL"
     gene            complement(17369..17806)
                     /gene="rpiB"
                     /locus_tag="RJ239_000634"
     CDS             complement(17369..17806)
                     /gene="rpiB"
                     /locus_tag="RJ239_000634"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HDV7330768.1"
                     /translation="MLREKIYIASDHAGFELKEKICVFLKEKNIIFNDLGTNTCASCD
                     YPDYAHLLAEKINKRSFGILICGSGIGISIAANRHKNIRCALCHESLSAELARRHNDA
                     NVLALGGRLIGVELAIDIIEKFIQTPFEEGRHMQRIQKIEVKI"
     gene            17972..18526
                     /locus_tag="RJ239_000635"
     CDS             17972..18526
                     /locus_tag="RJ239_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HDV7330769.1"
                     /translation="MKLILIGSSTGGPNQLKFLLKDIDVKNTCVVIAQHMSASFIPSF
                     VGQFNKEAFSEVCLLNDKEILSNKIYICPKNTILSGNLNIVAAWQDVASSFKPSVDLL
                     FHSAVSLAKTNKILAIILTGMGDDGAKGLFELYKTGVRCLCENEADSVVYGMPKRAKD
                     MNPHLKPMSLKEIKKEIVNFIDQD"
     gene            18542..19330
                     /locus_tag="RJ239_000636"
     CDS             18542..19330
                     /locus_tag="RJ239_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDV7330770.1"
                     /translation="MEKKITPSELELNEFIKIINEMSGIDLTDKKNILALKLNKFLEG
                     TNTKNFSEFLGKLKSNRQLKQETLDFVTIGETYFLRELAQLKEIIYYAKSLEKRVNIL
                     SAPCSSGEEVYSLALLAAQNFIKDMYILGVDINSSVIEKAKLGKYQGRTLQRLSESEK
                     RRFFLESEDKFYTINKNELCTCKFELCNVFEEKFSRLGKFDIIASRNMIIYFDHESKL
                     KLMERFHRILNDKGRLYVGNADLIPETIYFKKIFSPRGVYYEKV"
     gene            19466..20194
                     /locus_tag="RJ239_000637"
     CDS             19466..20194
                     /locus_tag="RJ239_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDV7330771.1"
                     /translation="MIELKNVNKYYGTHHVLKNINLSVKEGEKLVIIGPSGSGKSTTI
                     RCMNGLEEVSSGEVVVNNLVLNHKNKIEICRKYCAMVFQHFNLYPHMTVLQNLTLAPM
                     KLQKKSKKEAEETAFKYLKVVGLLDKANVYPATLSGGQQQRVAIARSLCTKKPYILFD
                     EPTSALDPETIQEVLDVMKEISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEEN
                     IPSEFFSNPKTERARLFLGKILKN"
     gene            20216..20995
                     /gene="peb1A"
                     /locus_tag="RJ239_000638"
     CDS             20216..20995
                     /gene="peb1A"
                     /locus_tag="RJ239_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adhesin/ABC transporter
                     aspartate/glutamate-binding protein PEB1a"
                     /protein_id="HDV7330772.1"
                     /translation="MVFRKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGV
                     KNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSV
                     DAVIATFTITPERKRIYNFSEPYYQDAIGLLVLKEKKYKSLADMKGANIGVAQAATTK
                     KAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFSVDKSILLGYVDDKSEILPDS
                     FEPQSYGIVTKKDDPAFAKYVDDFVKEHKNEIDALAKKWGL"
     gene            20997..21749
                     /locus_tag="RJ239_000639"
     CDS             20997..21749
                     /locus_tag="RJ239_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDV7330773.1"
                     /translation="MNESVGFVEHLRQILTSWGLYDENSISPFAVWKFLDALDNKDAF
                     INGFIYTLEVSILALLIATIFGTIGGVMATSRFKIIRAYTRIYVELFQNVPLVIQIFF
                     LFYALPVLGIRLDIFTIGVLGVGVYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQ
                     QMRYIIVPQTIRIILPPMTNQMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYAPAY
                     IFAAVLYFIICYPLAYFAKAYENKLKKAHLTR"
     gene            21760..22419
                     /locus_tag="RJ239_000640"
     CDS             21760..22419
                     /locus_tag="RJ239_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDV7330774.1"
                     /translation="MENVFNAQNIEFLMQGLFLTLKIALATCIISIVFGTFLAITKNY
                     GDRLSKFLAACYIDIFRNTPLLLWMLAACFVLPVFFGQFPQAFWGTIGFSLYTSSVMA
                     EIIRGGLNSIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAY
                     LAGLGIAELTYNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKKTAYI
                     S"
     gene            22527..23456
                     /locus_tag="RJ239_000641"
     CDS             22527..23456
                     /locus_tag="RJ239_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HDV7330775.1"
                     /translation="MRGYKIFSGSANVEFARQVSKYLSLPLSDAGVKRFSDGEISVQI
                     DESVRGKDVFIIQSTCAPTNDNLMELLILTDALRRSSANSITAIIPYFGYARQDRKAN
                     PRVPITAKLVANLIQAAGIDRVATIDLHAGQIQGFFDIPVDNLYGSIVFNDYIKAKHF
                     KNAIIGSPDIGGVARARSVAKHLGLDIVIVDKRREKANESEVMNIIGDVKDKEVILVD
                     DIIDTAGTIVKAAEALKEKGAKSVMACCTHAVLSGKAYERIASGVLDELVVTDTIPLK
                     EQLPNIKVLSVTPVFAEVIRRVYHNESVNSLFI"
     gene            23623..25734
                     /locus_tag="RJ239_000642"
     CDS             23623..25734
                     /locus_tag="RJ239_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HDV7330776.1"
                     /translation="MTQLSTKILWLFVAALGAICFGYLALQNGESVSAIYLVVAAVCI
                     YMIGYRFYGSFVAYKVLELDKNRATPALVENDGRDFVPTNKAVLFGHHFAAIAGAGPL
                     VGPILAAQMGYLPSMLWILVGGVLAGAVHDFVVLFISTRRKGRSLGEMIKDEMGKFTG
                     GVAMVAIFGIMLIIIAILAMVVVKALAESPWGLFTIAMTIPIAIFMGIYMRFIRPGRV
                     GEASIIGFVLLILAIHYGSVIAADPYWAKIFTLEAPTLAIVMMAYGFIASVLPVWFLL
                     APRDYLSTFLKIGVIVVMAVAIVLVAPDLQMPKANTQYFDGTGPVFAGGVFPFLFITI
                     ACGAISGFHALISSGTTPKMLENETHTLAVGYGSMLAESAVAIMALICACILHPGLYF
                     AINSSSALIGTDVVNVAQTISSWGFSITPEEITTLTTNIGEYTILSRTGGAPTFAIGV
                     ALILHELFGGVDLMAFWYHFAILFEALFILTAVDAGTRACRFMVQDILGNVYKPLGDI
                     HNYPAGLLATALSVAGWGYFLYQGAIDPKGGIYTLWPLFGVSNQMLAGMALLLATTIL
                     VKMDKARYTWVTLVPAVFVLVATLYGGIQKIMPYEEGNKIANAVSHVAAVSIQSQKIK
                     DLEFKLNNTKDEKEISTIRKEISIATQNKVGNLLNAILCVFFMIATLLVIISCIGICL
                     GKIKIPLKETKYIKIDEFQKI"
     gene            25715..25912
                     /gene="kcuS"
                     /locus_tag="RJ239_000643"
     CDS             25715..25912
                     /gene="kcuS"
                     /locus_tag="RJ239_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_148936501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KCU-star family selenoprotein"
                     /protein_id="HDV7330777.1"
                     /translation="MNFKKFKYYYEKAERFFHPLVGLSSYDKYLEHMKQKHPGKIPKT
                     RGEFFKECLDKKYNSGGLNKC"
     gene            complement(25952..26365)
                     /locus_tag="RJ239_000644"
     CDS             complement(25952..26365)
                     /locus_tag="RJ239_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDV7330778.1"
                     /translation="MRDMGEPKLKIVAMPSDTNPAGNIFGGWILSQIDLAGAIAAREL
                     SPERVVTISMDKVVFKEPVFIGDIISCYSKVVNVGNTSISVEVEVTAQRVDSQGCTSC
                     INVTSALVTYVSVTRDGKKNPISEELKRIHGFLNA"
     gene            26427..>26834
                     /locus_tag="RJ239_000645"
     CDS             26427..>26834
                     /locus_tag="RJ239_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330779.1"
                     /translation="MNNFKEIAKLVRKYKERNNALYEFLDKEDVGEYFRSLISLSELK
                     QDKTTMLAILRRLIDLKEENLVQEWKKNNFKEDKIIELKHKFYEEVRKFYEKEHQNLI
                     NEIKEKKLLNNFYQSLIQGVHNIGLIMNIFEISW"
BASE COUNT         8957 a         3576 c         4678 g         9623 t
ORIGIN      
        1 ttgcttggta acaattttat aagtataatt tacaaaataa taaaaaatag agctaaggaa
       61 aaaaaatgct tattattgga cataaattat taaaaaattt agatttttct tttattgaaa
      121 gtgttgaaga agttaaagat aataaagttt attgtattgt ttatgatgaa aaattgattt
      181 cttatttaag tcaaaatgat tttgaatttg ctattttagt tcaaaataaa gatgagatat
      241 ttttagccaa tgctttagga gctaagtttt tgctttgtaa tgataaaaaa cttgcaaaat
      301 ttgctagtaa ggttgcagaa ttttatgttt ttgatagtag ggttttaatg attgttgata
      361 aattagagaa ttttaaaaaa ttttataaat taaaaatcga tggaattatt ttaaaagata
      421 atatagataa ttttcctaaa aactgataaa ttcttttgta aaataagcgc taattgacga
      481 ggtttaaata atgcaaaaaa aatctttttt gaaaatttac ggattaattc cttttttact
      541 tatagcattc atcaatgctt ttgtggattt gggacataaa attattattc aaaatactat
      601 ttataaggcc tatgaaggaa gtgagcagtt atttttaaat gctatagtta atgctttgat
      661 tttacttcct tttattctta tgctttctcc ttcgggtttt ttagcggata aatatccaaa
      721 aaatattgta atgaaaattt cagcaatttt caatgttata ctcactttaa taatttgcat
      781 ttgttactat agcggtgctt tttggatggc ttttattttt acttttataa tgggagcaca
      841 agcagcgatt tattcaccaa gtaaatacgg ttttattaaa gaactcgtgg gaaaagactt
      901 tcttgctatg ggtaatggtg taattaatgc ggtaagcatt gtggcaatct tagcgggaat
      961 ggctttattt tctttaagct ttgaaagtct ttatagttct atgtataatc aaacagatga
     1021 aattttaaaa gaagtagcgc ctttaggaat tgtgctaatt ttattttctt gtatcgaagt
     1081 attttttgcg tggcgtttac ctaagctcaa acaaacaaat aaagatttag tttttaataa
     1141 aaaagactat attcgtggaa aacttctaat aaataatctt aagcttgttt ttaaaaataa
     1201 aactatttgg ctttgtataa ttggaatttc atttttttgg gctatatctc aactttatct
     1261 tgtcagcttt cctgtctttg ctaaaaatga acttttcata gaaaatactt tttatgtgca
     1321 aatttcactc gctttttctg gtataggagt gattttaggc tctttagtag ctggtaaatt
     1381 ttcaaaaaat tatatagaac ttggatttat tccacttggt gcattgggta tgtttttaat
     1441 ggctttttta atgccttatt ttataagttt attaagttat agttttttat ttttcttttt
     1501 tggattttgc ggagcccttt ttatcattcc tttaaatact ttaatccaat ttcatgctaa
     1561 agaaaatgaa ttaggacaaa ttcttgcagg aaataatttt tttcaaaata ttgccatgtt
     1621 gggatttttg ctcttggcaa ctttatttgt aaaatttgaa atcaatgtga tttatttgtt
     1681 ttattttatt gctttggtaa cctttatagg aagtttttac atacttttaa aactcccctt
     1741 ttctttagtg cgtatacttt taagcatagc ttttttacaa cgataccgtt tacttgtgga
     1801 aggttttgaa aatataccag aaaaaggtgg agctttactt ttgggtaatc atatttcttt
     1861 tattgattgg gctgttgtac aaatggcaat tccaagaaaa atttattttg ttatggaaag
     1921 aagtatttat tctaaatggt atattaaaat ttttcttgat aaatttggta ttattcctgt
     1981 atcaagtaca ggaagtaaga cgagtttaga actgatagca aagcatatta aagaaggtaa
     2041 tttagtttgc ttatttcctg aaggtacact ttcgcgacat gggcaattaa atgaatttaa
     2101 agcaggattt gaattagctt gtgaatgttt aagtgaagat gatggaaaaa ttattccttt
     2161 ttatataaga gggctttggg gtagcgcttt ttcaagaagt gatgaagaat tttcagcaag
     2221 aaaccgcact ttaaataaaa gaaaaattgc tatagctttt ggtaaagcta tgcctttgca
     2281 ttctaaaaaa gatgaagtta aagctaaagt ttttgaactt tcttttatgg cttggaaatc
     2341 acaatgcgaa gctatgcata ctatagcaag agcttggata gatacagcta aaaaaaatct
     2401 aaatcaaata gctattatcg atacactagc tggagatatt tcttatagaa aaatgttgac
     2461 tcttagttta tttcttaatt tttttattaa aagaaaatcc aaagagttaa acattaacct
     2521 tcagcgtgga agttacgctc ctaaagagga agctatagga attttactac ctgcttcttt
     2581 tgcaagttct ttaaccaatc tatctgtttt aatcgcagaa aaaattgcag taaatcttaa
     2641 tttcactgct ggagaaaaag ctctaaaagc agctataaaa aatgcgcaaa tttcacaaat
     2701 ttatacttct aaaacttttt tagaaaaatt agcaaataaa ggtataaacc taaatttcga
     2761 tacaaatata catttaattt attttgaaga tattgtagaa gattttaaaa tgcaaaaaac
     2821 taaaattttt agcatgatgc tagcagttag tattatacct agttttatac tcaaaagcat
     2881 cttcactcct tcaaaaaaca atcttgccat cgcagctatt ttatttagta gtggaagtga
     2941 aggttctcca aaaggtgtta tgctcaataa ccgtaatatt ttaagcaata tagcacaaat
     3001 ttctgatgtg ctttgcacaa gaaataatga tgtcattctc tcatctttac caccttttca
     3061 tgcttttgga cttaccgtaa ctacattttt gcctttgctt gaaggtatta aaagcatcac
     3121 tttttcagat ccaaccgatg ccttaggggt tgccaaagct gttgctaaaa ataatgtcac
     3181 tattatgtgt ggaacttcaa cctttttagg aatttatgca agaaataaaa agcttgatgc
     3241 tttaatgttt gaaagtttaa gaatagttgt atcgggcgct gaaaaactaa aaaatgaagt
     3301 aagaactact tttgaaatga agtttaaaaa aagcattttt gaaggttacg gggctacgga
     3361 aaccacgcct gtggcgagtg taaatttacc aaatcatttt gatgtggatt attggcttat
     3421 acatcgtgct aataaagaag gaagcgtagg aatgcctcta cctggaactg cggtacgtat
     3481 tgttgatcca aataattatg aaaatttaaa aacaaatgaa gatggactca tacttatagg
     3541 cggtcatcaa gttatggtag gctatcttaa tgacaaagaa aaaaccgatg aagtggttaa
     3601 agaaattgat ggcataagat ggtacaacac gggagataag ggacatttgg atgaagatgg
     3661 ttttttatat attgtcgatc gttattctcg ctttgcaaaa attggcggag agatgatttc
     3721 tttgggtgca atagaagaag aaattgccaa atttatagac actgaagtgg ttaaattttg
     3781 tgccacatct ttagaagatg agaaaaaaga ggaacaaatt gttttactca tagaatgcaa
     3841 taatgaaatt tttgaaggag tatgtgaggc tataaaaaat tctaatatac ctacactttt
     3901 taaacctaga tattattttc aaatagaaaa aattcccctc ctaggttcag gaaaagttga
     3961 tcttaaaaaa gttaaagaat tagctaaaaa tttagccata taatttgagc ttataacaaa
     4021 gtccaaatta aaattggcat agaaacaaaa gcaaaaagaa ctccaaaggc tacagcactt
     4081 acggctaaat tactatctag tttagctttc attaccatag ctcctgctaa agtcatagta
     4141 ggagctgcac tttctataat agcaacgatg gtagaatctt ttaattccaa attaaatatt
     4201 tttaaacaaa atacaaaaaa taaaggagct aaaatcattt tagcaaagat gacaactatt
     4261 gtaggtttgt aagaggtttt aatcgccata aagccaagtc ctaaacctat agcaaaaagt
     4321 gcaacagggg ttgcagaggc accaaataaa cgaataggag agaaaataaa ttcaggtaaa
     4381 gtaatcaatt tacacaaaaa accaaaaagc aaagctaaaa aaggtggaaa actaagaatt
     4441 tttttaacat tagcaagcaa actgactttt tctccatttc ccaaagaaag tataaaaggt
     4501 ccaaaaagtg atataggtaa agttgtggct aaagcatcgt aaaatataac ttcagcgcta
     4561 aattgtgggt cattaaatat accagcaaca ataggcatac ccacaaatat agtatttcca
     4621 aaacaagaaa gcaaaaacat actgactaaa gttactttag aaaaatgaaa aacttttcca
     4681 ataagaatag caaaaaaagc tgctagtata cagctaaaca atccaataaa aataaaaata
     4741 atcaatgaaa aatcaaaatt taaatgatat gctttatcga aaatcaaaca aggtaaagca
     4801 aaaataatag caaaatctaa aaaagtccta gcttgttttt gctttaaaac gccaattctt
     4861 ttggcaaaat atccgcctgc aagtaaaata aaaattgtaa ataatggtat aaaaacaaac
     4921 attgaataat cctttttaag ggatggtttt tgaaaacgga tagaattata ttctttatac
     4981 ttaaaaaaaa tcttaatatt ttttaagttt tttaaaaaaa ccaatatttt ttattttttg
     5041 taactttaag aaattgtaag ttgaaatttg attttgaata gttagtattt taagttgaat
     5101 gattataatt ttaaataatg gtgcggttag cgagatttga actcgcacac gcggagcgca
     5161 ccaccccctc aagatggcgt gtctaccaat tccaccataa ccgcatagaa aaaagcccaa
     5221 aaagggcttt gataagtttt attgtaaaac tataaaagga tttgcgtaaa gtgctattag
     5281 cgcgataaca agagcataga taacttgtgc ttcaatcatc gctaaagcga taaacatagt
     5341 tgtcattaat tttggcccaa gaccagggtt tctagctgtt cctgcaattg ttgccgctgc
     5401 agtattaccc ataccgatag caccaccaag tgctgcaaca ccaagaccta agcctgctgc
     5461 aagaactgaa aatgctttaa tccatacatt aatagcttct tgctctactg gagcattagt
     5521 ttcagctgca aaagctactg ctgtacatgc taataataaa aaaagaactt ttttcattat
     5581 cttaaccttt ctataaaaaa atttttttca atttttaaat cagttcggct tgcgtatccc
     5641 tacttaagac ttaaaaataa attcgaatta taaccaaaag tatctttatt tttattgaaa
     5701 tttacaaaaa ttcacatttt tgatttaaat ttgattgttt tcaataaagc ttaaaagttt
     5761 ttttgcttta ataatatttt aaaataattt ttaagtcaag gttgtaacat tgagttctaa
     5821 attttcaaaa ataggtttca ttttagcggt agcaggttca gcggtgggct tgggtaatgc
     5881 ttggaaattt ccaacactag taggtcaaag tggtggatct gcttttatct tgctttatat
     5941 aattcttact ttaggtgtag gttttgtgat atttttagct gagcttagca taggaaaaat
     6001 tagtgaaaaa gatccggtta atgcctatga aaagttagca ccttcaaata aaaaagcttg
     6061 gtcttatgtt ggttttacta tggtgggggc gattttaata gtttcttttt ataccttggt
     6121 gattggctgg atagttaaat atgtgttttt aagtatcact ggaaatttgc ctatggatct
     6181 agaagtaagt aaagcacagt ttggattttt tataagtgag gattttttaa gtcagtttat
     6241 ttgttttact ttggtttttt tatgtgtttt ttatattgtt tctaaaggtg ttaagaatgg
     6301 gattgaaaag ttaaatgttt ggatgatgcc ttcattgttt attttgctta ttttgatgct
     6361 tgtttatgct attagcaaag atggttttat aatggcggtt aaatttcttt ttgtacctga
     6421 tttttccaaa atcaacactt caaatgttct tgaagcctta ggacttgctt tttttagtct
     6481 ttctttgggc gttggaacga ttattactta ttctgctagt ctgcctgata aaaccaattt
     6541 tattaccagt actttaaata ttatttttat caatctttta gttggtttat taatgggttt
     6601 ggttgttttt acttttatct ttgagtttgg ttacaatcct aatcagcaag gaccaggact
     6661 tgtttttatt tccttagcta ctttatttga aaaaattgga gtgattggtt gtatttttgg
     6721 agcagcgttt tttatttctt taatctttgc tggtattact tcagctgttt caatgataga
     6781 gcctttcact ttttacctta ttaatacttt tggtatgagc cgtaaaaaag ctttgatttt
     6841 aataggaatt gttgtttata ttttaggaat gttgtgtatt ttatcttctt taaaaagtac
     6901 tcagtttgga ttttttggaa tgagtttttt tgatttgctt gatagtgttt caagcaaggt
     6961 tattatgcct ttaggtggaa ttttggcagc tatttttgtg ggatttgtga tgaaaaaaga
     7021 agctttaaaa attttattta aaccttatat gaggggtata ttttttgaac tttggtatgt
     7081 gtttttgaga tttatttccc ctttggctgt tgttatagtt atgatagccg cttttttaaa
     7141 gtgagtttga aaaataatga gaacatattt ttcaaaaatc ggttttgtat tgactgttgc
     7201 tggtggagcc gttggtttag gtaatgcttg gaaatttcca actttaagcg cagaaaatgg
     7261 tggttttgtt tttgtgcttt tatatttgtt ttttacttta actataggat ttagtatttt
     7321 tttggctgaa gtggctatgg gacgtttaag taaaagtgat cttgcaaatg cttattcaaa
     7381 tcttgccata aaatatggca atagatggcg atatggcggc gtttttatgt taggtggtat
     7441 ttttgtcctc tctttttatc tagttatcat gggatgggtt ttaaaatata ctgtagtgag
     7501 tctttattat cttcctaaaa ctttagatga agcagcaagt aattttcaga atttaattac
     7561 tacaaatttg acaagttctg tttttttctt cactttatct ttttttctta ctttattgat
     7621 agtatctaaa ggtttaatca aagggattga aaaattaaac gttgttataa tgcctagctt
     7681 atttttaatg cttgttttta tgttgtttta ttgcatggga tttaagcaag gttttgcaaa
     7741 tgctttttct tatttatttt atcccgattt tttacatttt aaattcagct ctattgccga
     7801 agctttaggg cttgcatttt ttaccttatg cttgggaata ggttgtatag ttacatattc
     7861 atcggccttg gataaaaaaa caaattttat aaaaagttca gtgtatattg ttttgattaa
     7921 tttattgatt tcttttatca tgggacttat tgtttttact tttatctttg aatttggagc
     7981 cgatccgcat actcaaggag taggaattgt ttttatatcc ttgatgagtt tgtttaatca
     8041 acttggagct ttaggctata tttttgcatt ttgttttttc ttagcacttt tttttgctgg
     8101 tattacttca gctgtttcaa tgatagagcc tttaactttt tatatgatta ataactatca
     8161 aatttctcgt gttaaagctc tatttttaat aggtttattt gtttttgttt ttggaatttg
     8221 ttgtatcttg tcattaaatt taaatttttt ttctatgttt agtttttttg gtaaagattt
     8281 ttttacttta ttagataaat taacttcaaa ttttttactt ccacttggtg ctatagtatg
     8341 ctctatattt gtaggttttt ttatgaataa aaaacaaatt tataaaattt tttctaaatt
     8401 tataagtcga aaaattttct taatttggtt gttttttatt cgttttatat cgcctatagc
     8461 aataattttg gtaatgtgtt atcaaatttt tgtataataa tgaaaaaata tttttttaag
     8521 gaaaaataat ggctaaaaaa ttcatcgatg taatggatac aagctttagg gacggttttc
     8581 agtctgttta tggagctagg gttttaatgg atgatttttt tcctgcagta gaagcagcaa
     8641 aagaagcggg tattactcat tttgaatttg gtggtggtgc tagatttcaa agcttgtatt
     8701 tttatcttaa tgaagatgct tttaccatga tggatagatt tagggctatt gtaggaaaag
     8761 atgctaatct tcaaacttta gcaagagggg ttaatactgt tactttagat actggaagta
     8821 gtgagcttat tgatttgcat gcaaaacttt ttgcaaaaca cggtaccaca acgataagaa
     8881 attttgatgc tcttaatgat ataaataatt taaaatttag tggtgaatgt atagcaaaac
     8941 atggattaaa acatgaaatc gctattacct taatggatct accgccaaat tgcaaaggtg
     9001 ctcatgatgt gcctttttat gaaaaaattt tgaaagaaat tttagcagca gaaattcctt
     9061 ttcacagcat ttgttttaaa gatgcaagtg gaacttcaaa tccaaataaa atttatgaaa
     9121 ccattaaaat ggcaagaaaa attttacctc aagatatgca tattagactt catacgcatg
     9181 aaactgcagg ggtgagtata gcctgctatc ttgcagcact tgaagcaggt gttgatggta
     9241 tcgatttggc tgcagctcct gtaagtggtg gaacttctca gcctgatatt ttaaccatga
     9301 tgcatgcctt aaaaggtaaa gattatgatt taggtggact tgaagaagaa aaaattctaa
     9361 aatacgaaga agttttaaaa gattgtttaa aagagtattt tttaccccct gaagctacta
     9421 tggtaaatcc acttattcct ttttctccta tgccaggagg agctttaacg gcaaatacac
     9481 aaatgatgag ggataataat attttagata aatttccaca ggtcattcat gctatgagag
     9541 aagttgtaga aaaaggtgga tttggtactt cggttactcc agtttctcaa ttttattttc
     9601 aacaagcatt taataatgtt atgtttgggt cttggaaaaa aatcgcagaa ggttatggaa
     9661 aaatggtgct tggttatttt ggaaaaactc cagttgcacc cgatgcaaac attattgagc
     9721 ttgcttcaaa acaacttaat ttagaaccta ctacagagct tgctataaat atagctgata
     9781 aagatgagag taaaagtata gcttatacca aaaccttgct tgaaaaagag ggtatagaaa
     9841 cgagtgaaga aaatatattt gttgcagcag cttgcaaaga aaaaggtata gcatttttaa
     9901 aaggagaggc aaaggtaaat atacgcaaat tagccagtat gccaaaacct atgagtgcag
     9961 atgaaaacaa atttaccgta gctgtaaatg gtaataaata tcatgtagaa gtaagctatg
    10021 gctttgataa agatgttaat gttaaaagtg tgaaaaaagt agaagaaaat aaaaatatta
    10081 tttcttcaaa ttcaacaagt tctgtagatg ctgaaaatga agttttagca ggtatttcag
    10141 gtaatgtctt taaaatttat gttaacgaag gcgaagaagt aaaatcaggt caagctatca
    10201 tggttttaga agcaatgaag atggagattg aggttaatgc cccaaaagat ggaattattt
    10261 tagagctttg tattaaaata ggtgatactg ttaatgaagg cgaagtatta gctatttaca
    10321 agaattaaag tgagggaaaa atgaaaaaat ttgataagtt aggtttggat aatataaagg
    10381 aaatttttca taatttaagt tatgatgaat taaatgctca tgaaaaagca aataatgaag
    10441 gtttaagcac ggataatgat actttttgtg tagatacagg gatttttaca ggtagaagtc
    10501 ctaaagataa atattttgta aaacaagatc catctagtaa atatatagct tggggaaagg
    10561 taaatcagcc tattacaaaa gaattatttg ataaactttt aactaaagca aagcaagaat
    10621 taagcggaaa gaaaatttat gttcaagatg ttttttgcgg tgcttctttg caaagtcgca
    10681 aagcagtaag atttgttact gaaattgcat ggcaagcgca ttttgttaaa aatatgttta
    10741 ttcgcccaag tcaagaggaa cttgagaatt ttaaagcaga ttttattgtt tataatgctt
    10801 gcaaatgcat caatgaagat tacaaacaag atggtttaaa ttcagaggtt tttgtgatct
    10861 ttaatgttga agaaaatata gcggttattg gtggaacttg gtatggtgga gaaatgaaaa
    10921 aaggtatttt ttctatgatg aattattggt taccactaga aaataaactt tctatgcatt
    10981 gtagtgcaaa tgtcggagaa aaagacgatg tggcactttt ctttggactt agcggtacag
    11041 gaaaaactac gctttcaacc gatccaaaaa gaagactcat aggtgatgat gagcatggct
    11101 gggatgatga aggtgtgttt aattttgagg gcggttgcta tgcaaaaaca atcaatcttg
    11161 atcctgaaca tgagcctgaa atttatggag ctattaaaag aaatgcactt ttagaaaatg
    11221 tagttttaag agctgataag agtgttgatt atgctgatgc ctcaaaaaca gaaaacacga
    11281 gagtttctta tcctatagag catattgaaa atcatgagcc tagtctaaaa gcagggcatc
    11341 caaaaaatat tatattttta agtgcagatg cttttggaat tttacccccg gtaagcaaac
    11401 taagcaaaga gcaggctatg tattattttt taagtggcta tacagcaaaa gtagctggaa
    11461 ctgagcgcgg tataacagag cctcaagcaa ctttttcagc ttgttttgga gaacctttta
    11521 tgcctttaca tccaacggtt tatgcgagat tgcttggtga aaagattgaa aaacatgaag
    11581 ttaatgttta tcttgttaat acgggttgga gtggcggaag ctacggtgtg ggtaaaagaa
    11641 tgagcattaa ggctactagg gcttgcatta atgccattct agatggaagt attacaaaat
    11701 gcgaatttga aaattttgaa gtgtttgatt tagctattcc aaaagcttta gaaggtgtag
    11761 aaagtgtact tttaaatcct ataaatactt ggttagataa aaatgcttat attgcaacaa
    11821 gagataaatt agcacatatg tttatacaaa attttaaacg ttatgaagat gtcaaagaag
    11881 gcattgaatt tagcaaattt ggaccaaaaa tttaaggcat ttaaatgaaa aatgaaatgt
    11941 ggtcaggacg ttttagtggt gcaagtgatg agcttttaaa agaatttaat gcaagtttaa
    12001 atgtagataa aactttgttc aatgaagata tacaaggttc tatagcacac gctacaatgc
    12061 ttgaaagttg tggtatttta aaaaaagaag aattagatgc tattataaaa ggtttagagc
    12121 aggttagaag tgaaatagag caaggtaaat ttatttttga tattaaagat gaagatattc
    12181 atatggctgt agaaaagcgt ttaagcgaga ttataggtag tgaaattggc ggaagactac
    12241 atactgcaag aagtagaaat gaccaagtgg ctactgattt taaacttttt gtaaaaaaat
    12301 ctcatattga actcataaag cttttaaaag aattgattca aaccatgctc gaacatgcta
    12361 aagtgcataa aaaaactatt atgccaagtt ttacacattt acagcacgct cagcctgtga
    12421 gtttttcttt ttatatttta gcttatgctt ttatgttaat gcgagatatt aagcgtttgc
    12481 aaaatagcct agaacttgca gacttttcac cacttggatc ttgtgcatgt gcaggaacaa
    12541 gctatgctac caatcgtgag ttgagtgcta aaattttagg atttaaagat attatgccaa
    12601 atgctatgga tggagtgagt gatagggatt ttgctcttga tttgctttat gatatagcag
    12661 ttatttttac acacacttca agactttgtg aggaaatgat tttattttca agctcagaat
    12721 tttcttttat aaccataagt gatagttttt caacgggaag ttctattatg cctcagaaaa
    12781 aaaatcctga tgtttgtgag cttatacgtg gaaaaacagg gcgtgtttat ggaaatttga
    12841 tttctctttt aactataatg aaagctttac ctttagccta taataaagat atgcaagaag
    12901 ataaagaagg gatttttgat agtgtaaaaa ccgctaaaga tagcttaatc atcttaaatg
    12961 caatgctaaa agaaatacaa attaataaag aaaatatgct taatgcttgt aaaaaaggtc
    13021 atttattggc taccgatttg gcagattatt tggtgcgtga aaaaaatatt ccttttagaa
    13081 aagcacattt tatagtggga aatgttgttg cacaagctga agcacaaggt attgatataa
    13141 gtgaaattaa agatctttca aaaatagatc ctgtatttga tgaaaaagct atggaacttt
    13201 taaattttga attttcttta aattctaagc aaagtgaagg ctcaagttct attgcaagcg
    13261 tagaaaagca aattcaaatt ttggaaggtt ttattcaaaa tttataaata ttgtttaggc
    13321 tattttgcct aaacattgaa tttaaaatgc attacatcgc catctaaaac gatatagtct
    13381 tttccttcaa ggcgtagctt tcctgcttct ttggcgccat tttcgccttt gtattggata
    13441 taatcttcat aggaaataac ttcagctttt ataaagcctt tttcaaagtc attgtgaatt
    13501 acacttgctg cttttggtgc tttccagcct tttttgattg tccaagaacg cacttcaact
    13561 acaccagcgg taaaataact gatcagtcca agcttagcaa aagcagtgcg tatgatttga
    13621 tcaagaccgc tttcgttaac tcctagagaa cttaaaaatt catgactttc ttcatcgctt
    13681 aatcctacta attcttcttc gatttttgca caaagcttga taacttcatg atcatttttt
    13741 ttagcatatt cttttaaagc ttttacataa tcattatctt cactaatacc attttcatca
    13801 acatttgcac cataaatcac ttctttagca gaaagcagtc ttaattcttt gattaaggct
    13861 tgataaattt cactttcttt ttcagggtaa gaacttgcag ctaagccttt gtttaaatga
    13921 tcaagtaagg aatttgcaag ttcgagactt tctttagcac ccttttgatt ggctttggct
    13981 tctttggtga gtttttctat ttttttactc agttgttcaa tatctgctaa aataagctct
    14041 gtattgataa tttctacatc acgtaaagga tcaactccac cttcaacatg ggtaatattt
    14101 tcttcatcaa aacaacgtac tatatgcaaa ataacctcag tttcacgtat atttgaaaga
    14161 aatttatttc ccaagccttc gcctttactt gcgcctttaa caagtccagc gatatctaca
    14221 aattctatta aagaatgcat aattctttca ggttttacta ttttagcaag ttcattaagt
    14281 cttaaatcag gaacttcaac catggcttta ttaggctcta tggtgcagaa aggatagttt
    14341 gcactttggg cattttgtgc tttagttaaa gcattaaaag ttgttgattt gccaacattt
    14401 ggaagtccta ctatacctac gcttaaactc atttagcttt ccttaaaatt tgaattaaat
    14461 aattaacaca cattctaact ccagctccac ctgcgccaaa actagaatat ccccaagatt
    14521 tttctgtata agcaggtcct gctatatcaa gatgtagcca tttatcttta tattctttac
    14581 gaataaattt atctaaaaat aaccctgcgg taattgcacc tccgtagcga ctagaggcag
    14641 tattactaac atcggcaata tttgatttta taagttctct taagtgaggg ttgaaatgta
    14701 agattgtggt atattctccg ctttttttag agcttagata aaaatcattt tgcaattcct
    14761 cattatttcc cataatagcg cttgtaaatt ctccaagtcc tacaacacaa gctccagtaa
    14821 gagttgccat atcgataagt aaatcaggtt ttaaatcctg tgcaaaagaa agacaatcag
    14881 ctaaaaccaa gcgtccttct gcatctgtat ttcttacttc tatgcttaca ccttcacgac
    14941 tgattaacac atcatcaggc ttataagcat tgccgcctat catattttca gttgcgccca
    15001 aaatgcaatg cacttctaaa tctaaagcaa gttcagctac ggcttttatg attcccattg
    15061 ctgctgctgc accgctttta tcagctttca ttgtaagcat aaaatcagct ggttttaagc
    15121 ttaatccacc gctatcgtaa gttaagcctt ttccaacaaa tacaacacgt ttttttgcat
    15181 ttttggcttt atagcttaga tgaatgaggc gtggtgggtg taccgaggca tgatttaccg
    15241 ctaaaaaggc attcattttt tctttggcta aaaatttttc atcataaatt ttacaaataa
    15301 tgtttttatt ttctttagct aaattttgcg catcttctgc catttttaaa ggggtgtaaa
    15361 tttcaggaat ttcattgact atatttttag taaaatttgt agcattggct aaaatttctc
    15421 cacgctctaa acctatctta gcttcatctt tattaaattt cttaccattt aattcttcgt
    15481 ttgaaataat aaatttttcc aaagtacttg tttttttctc gcttttatat ttgtcaaatt
    15541 tataagctcc aaaaagtacg ccttcaacta aagatgcaaa acttctaact acacaatctc
    15601 ctattatgct aggaagtttt acgcttttaa tattaagttt ctcaagagtt ttatatgctg
    15661 tgcaaagact taatcttata tcctcataag caagactttt aagctctaaa taaagctttt
    15721 tattgtttaa gtctaataat gcaccttcgc ctttgtaatt attaagttta aaaaaatctt
    15781 tttctttgtt aaaaattttt aaatttttat cctgtataaa aacaagttca aagtctgctt
    15841 ttatagcatc tagtttttta tcgtttaatt caaatttcat gattttttcc ttttatcttt
    15901 aagtatagct ttttccattt gtttaaaacc aaataataaa agggataaaa aagctataat
    15961 aataatggct gcataatacc aatgttcttc agcccaagtc accatcttcc aaatttgttc
    16021 tccaaaatac caagctaaaa gtatagtgat tgatgcccaa acccaagcac taaaaagatt
    16081 gataatagca aatttttttg cactataacg cgtgattcct atactcatag gtataatggt
    16141 tctaaagcca tacatatagc gttgtataaa aataataggc caaccaaaac gttgtaaaag
    16201 taggtgtgct actgcaaatt tacgcctttg agtttttaat tttttttgta tgtagcattt
    16261 attatatctt cctatataga agtaaatttg atcgcctaca aaaccgccaa gacctgctat
    16321 aaatataaca aagcctaaat ttacatgtcc ttgatgggca aaaataccag ctaaaattaa
    16381 agctaactct ccttctaaaa tgcaccataa aaaaataata atataagcta gatctttgta
    16441 ttggtaaagt aaatttttta aaaattcttc catttgtacc tttctatagt tttaaatttc
    16501 taaaacacta taaactgaag taagtttttc aagtttattt gctccattta aatctttaag
    16561 atttattaaa aaacaagctt caacacattt tgctccagct ttttgaatga gttcatatga
    16621 agctatagct gttccgccag ttgctattaa atcatctaca agtaaaactc ttgcattttg
    16681 aatattttta aatgcatctt tatgaagttc tactttatcg ctgccatatt caagatcgta
    16741 ttcgcagcta aaggtttcaa aagggagttt tccaggtttt ctaataggca caaaaggaag
    16801 attaagtttt gcacaaatca tagatgcaaa gataaatcct ctgctttctg ttcctgctat
    16861 gaagtctaga ttgtaatctt tgtagcgttc ttttaaatgt ttaagtagaa aatttaaagc
    16921 ctctttgtta tttagtagag tggtaatatc tctaaaaata attccttttt ttggaaaatc
    16981 aggaataatc ctaatgctat caagcaggta tttttgttct tcttgtgtta gttttatcat
    17041 aataatgcct caatttttgc ttctaattct ttaattcttt gtcttagttt gtcattttcc
    17101 aagcgatatt gagaatttct ggttcttaaa gatgtaaggt ctgctttgat tttattaagt
    17161 tcttctgtga gtatatctat atttccaaga cttctttgaa gttgaatttg tagttttcta
    17221 atgacaatct cagtatcatc aagattgttt ttgataaaat cttttgatgt tttttcttta
    17281 ttaagtagag ttttatagta aaacaacatt acaataagat agatagttgc acaaatcaat
    17341 atagttaaaa caagccagtt tgtaaacatt atatttttac ctcaattttt tgaattcttt
    17401 gcatatgtct cccttcttca aaaggagttt gaatgaattt ttctataata tctatagcta
    17461 attcaacccc aattaatctt ccgcctaatg ccaaaacatt ggcatcatta tgccttcttg
    17521 caagttctgc acttaagctt tcgtggcata atgcacaacg aatgttttta tgacgatttg
    17581 ctgcaataga aattccaatt ccacttccac aaataagaat gccaaagctc cgtttgttta
    17641 ttttttcggc aagtaaatgc gcataatcag gataatcgca gcttgcgcaa gtgtttgttc
    17701 ctaaatcgtt aaaaattata tttttttctt ttaaaaatac gcaaattttt tcttttaatt
    17761 caaaaccagc atgatcacta gcaatataaa ttttttccct aagcattggt ttcctaatta
    17821 ctatataaaa taagataaaa acctaatctt atcatattaa atcataaaaa cagcttttct
    17881 ttgttttaaa aataagcttt atttttcttt atatatgtta gaatcatgtg acaagaaaaa
    17941 taaaatttca ataaattaag aggagaagaa agtgaagctc atactcatag gatcttcaac
    18001 aggtggtcct aatcagctta aatttctttt aaaggatatt gatgtaaaaa atacttgtgt
    18061 agttatagct cagcacatga gtgccagttt tattccatct tttgtggggc aatttaataa
    18121 agaagctttt agtgaagtgt gcttattgaa cgataaagag atattaagca ataaaattta
    18181 tatttgccct aaaaatacta ttttatctgg aaatttaaat attgtagccg cttggcaaga
    18241 tgtggcttca agctttaaac cgagtgtgga tttacttttt cattccgctg tttctttggc
    18301 aaaaacaaat aaaatacttg ctattatttt aacgggcatg ggagatgatg gcgcaaaagg
    18361 tttatttgag ctttataaaa caggagttag atgtttatgt gagaatgaag cagatagcgt
    18421 cgtttatggt atgccaaaaa gagcaaaaga tatgaatccg catttaaaac ctatgagctt
    18481 aaaagaaatt aaaaaagaaa ttgtaaattt tattgatcag gattaataaa aggaaaattg
    18541 catggaaaaa aaaataactc ctagcgaatt ggaacttaat gaatttataa aaattatcaa
    18601 cgaaatgagt ggtattgatt taaccgataa aaaaaatata ctagctttaa agttgaataa
    18661 atttcttgaa ggaactaata ctaaaaattt ttccgaattt ttgggaaaat taaaaagcaa
    18721 tagacaactt aaacaagaaa ctttagattt tgtaaccata ggtgaaactt attttttaag
    18781 agaattggct caattgaaag aaataattta ttatgccaaa agcttagaaa agagagtaaa
    18841 tatcctaagc gccccttgtt caagtggaga agaagtatat tctttggcat tattggctgc
    18901 acagaatttt attaaagata tgtatatttt aggcgttgat attaattcaa gtgtgattga
    18961 aaaagcaaaa cttggaaaat atcaaggaag aactttacag cgattgagcg agagtgaaaa
    19021 aagaaggttt tttttagaaa gcgaagataa attttatact attaataaaa atgagctttg
    19081 tacttgtaaa tttgaacttt gcaatgtttt tgaagaaaaa ttttcaagat tgggaaaatt
    19141 tgatattata gcttctagaa atatgattat ttattttgat catgaatcaa aactaaaact
    19201 tatggagagg tttcatagaa ttttaaatga taaaggaagg ctttatgttg gcaatgctga
    19261 tttaattcca gagactattt attttaaaaa gattttctct ccaagaggtg tttactatga
    19321 aaaagtataa attctaaaaa ttactaaaag ttacactttg gaaatttatt agtaaaaata
    19381 agttacattt tgaagtagtt ttctttattt aatgataaaa taatttcaat taattttata
    19441 tttagctaaa aataaaggaa aaaacttgat tgaattaaaa aatgtaaaca aatactacgg
    19501 aactcatcat gttctaaaga atattaatct ttctgttaaa gaaggtgaga agcttgttat
    19561 tataggtcca agtggaagtg gaaaaagtac aactatccgt tgcatgaatg ggcttgaaga
    19621 agttagttca ggagaggtcg tagttaacaa tcttgtttta aatcataaaa ataaaattga
    19681 aatttgccga aaatattgtg caatggtttt tcagcatttt aatttatatc cacatatgac
    19741 ggttttgcaa aatttgacct tagctccaat gaaacttcaa aaaaaatcta aaaaagaagc
    19801 tgaagaaaca gcttttaagt atttaaaagt tgtaggtttg ctggataaag caaatgttta
    19861 tccagcaacc ctttcaggtg gacaacaaca acgcgttgct atagcaagat cactttgtac
    19921 taaaaaaccc tatattttat ttgatgaacc tacttcagcc cttgatccag aaaccataca
    19981 agaggtttta gatgtaatga aagaaatttc acatcaaagc aatactacca tggtggttgt
    20041 tacacacgaa atgggttttg caaaagaagt agcagatagg attattttta tggaagatgg
    20101 tgctattgtg gaagaaaata ttcctagtga atttttctca aatccaaaaa ctgaaagagc
    20161 gcgactcttt ttagggaaaa ttcttaaaaa ttaaccaaaa ttgaaaggag aaaaaatggt
    20221 ttttagaaaa tctttgttaa agttggcagt ttttgctcta ggtgcttgtg ttgcatttag
    20281 caatgctaat gcagcagaag gtaaacttga gtctattaaa tctaaaggac aattaatagt
    20341 tggtgttaaa aatgatgttc cgcattatgc tttacttgat caagcaacag gtgaaattaa
    20401 aggtttcgaa gtagatgttg ccaaattgct agctaaaagt atattgggtg atgataaaaa
    20461 aataaaacta gttgcagtta atgctaaaac aagaggccct ttgcttgata atggtagtgt
    20521 agatgcggtg atagcaactt ttactattac tccagagaga aaaagaattt ataatttctc
    20581 agagccttat tatcaagatg ctatagggct tttggtttta aaagaaaaaa aatataaatc
    20641 tttagctgat atgaaaggtg caaatattgg agtggctcaa gctgcaacta caaaaaaagc
    20701 tataggtgaa gctgctaaaa aaattggcat tgatgttaaa tttagtgaat ttcctgatta
    20761 tccaagtata aaagctgctt tagatgctaa aagagttgat gcgttttctg tagacaaatc
    20821 aatattgtta ggttatgtgg atgataaaag tgaaattttg ccagatagtt ttgaaccaca
    20881 aagttatggt attgtaacca aaaaagatga tccagctttt gcaaaatatg ttgatgattt
    20941 tgtaaaagaa cataaaaatg aaattgatgc tttagcgaaa aaatggggtt tataatatga
    21001 atgaaagtgt aggttttgtt gaacatttaa gacaaattct tacttcttgg ggtttatatg
    21061 atgaaaatag tataagccct tttgcggtat ggaaattttt agatgctttg gataataaag
    21121 atgcttttat taatggtttt atttatactt tagaagtaag cattcttgct ttgcttatag
    21181 ctacaatttt tggaactata ggcggagtta tggctacaag tagatttaaa attatcagag
    21241 cctacactag aatttacgta gagctttttc aaaatgttcc tttggtaata caaattttct
    21301 ttttgtttta tgccttgcct gttttaggta taaggcttga tatatttact attggtgtat
    21361 tgggtgttgg ggtgtatcac ggagcttatg taagcgaggt ggttagaagt ggaattttgg
    21421 ctgtgccaag aggtcagttt gaagcttctg cgtctcaagg gtttacttat attcaacaaa
    21481 tgcgttatat tatagtacct caaaccatta gaattatttt accaccgatg acaaatcaaa
    21541 tggtaaattt aattaaaaat acctctgtat tgcttattgt aggtggagct gagttaatgc
    21601 attctgctga tagttatgca gctgattatg gaaattatgc gccagcttat atatttgcag
    21661 cggttttata ttttataatt tgctatcctt tggcttattt tgcaaaagct tatgaaaata
    21721 aattaaaaaa agcacattta acgagataaa gggttgttaa tggaaaatgt ttttaatgcg
    21781 caaaatattg aatttttaat gcaaggttta tttctgacat taaaaatagc cttggcaact
    21841 tgtattattt cgattgtttt tggaactttt ttagctataa ctaaaaatta tggagataga
    21901 ttaagtaaat ttttagcagc ttgctatata gatattttta gaaatactcc tttattgcta
    21961 tggatgctcg cagcttgttt tgttttgcct gtattttttg gacaatttcc tcaagctttt
    22021 tggggtacta taggattttc actttatacg agttcggtta tggctgaaat tattagaggc
    22081 ggattaaatt ctataccaaa aggtcagttt gaagcagctt attcacaagg ttttggtaaa
    22141 ttttttactc ttttttatat tattttacca caaactttta gaaaaataat acctgcttta
    22201 ttatctcaaa ttgtaaccac tgtaaaggat acagcttatt tagcaggtct gggtatagct
    22261 gaacttactt ataattcaaa aactatattg gcaaaactaa caagttttga agaaatttta
    22321 gcgatgatag gtgttgttgc gggaatttat tttataatat gtttttcact ttctatgttg
    22381 gtaagatatt atgccaaaaa gacagcttat atttcttaaa aaagcttata tttttatata
    22441 agctttttaa atttacagca gtttttaaca ttttttttat taaaatcttt tgtattaatt
    22501 cataatttta ttgattaagg ttttttatgc gaggttataa aattttttca ggctcagcta
    22561 atgtcgaatt tgcaagacaa gtttctaaat atctctccct gcctttaagt gatgctggag
    22621 taaagcggtt tagtgatgga gagattagcg ttcaaattga tgagagtgta cgcggaaagg
    22681 atgtttttat tattcaaagt acttgcgctc ctacaaacga taatttaatg gaacttttaa
    22741 ttcttacaga tgctttgcgt cgctcaagtg caaattcaat tacggctatt atcccatatt
    22801 ttggctatgc gagacaagat agaaaagcaa atcctagagt gccaattact gctaaacttg
    22861 tggctaattt gattcaagca gctgggattg atcgcgtagc tacgatagat ttgcatgcag
    22921 gacaaattca gggttttttt gatattccag tagataatct ttatggaagt atagttttta
    22981 atgattacat taaagccaaa cattttaaaa atgctattat aggaagtcca gatatagggg
    23041 gtgttgcaag agctaggagt gttgcaaagc atttaggact tgatatagtt atagttgata
    23101 agcgtcgtga aaaagccaat gaaagtgaag taatgaatat tattggagat gtaaaagata
    23161 aagaagttat cttagtggat gatattattg atactgctgg cactatagtt aaagccgcgg
    23221 aagctttaaa agaaaaaggt gcaaaatctg ttatggcttg ctgtactcat gcagttttaa
    23281 gtggaaaagc ctatgagaga atagcaagcg gagttttaga tgagcttgtg gtaacagata
    23341 ctataccttt aaaagagcaa ttaccaaata ttaaagtatt aagcgttaca cctgtttttg
    23401 ctgaagtaat acgtcgtgtt tatcataacg aaagtgtaaa ttctctcttt atttagatta
    23461 aaaaagctta aagattattt ttaagctttt catttttatg ctacttaaag aaacaaaaaa
    23521 catatatttt tttaaaaatg tgaaaaaact aaacatcttt ctatacaatt taatctataa
    23581 atctgctatt ctttgaaaat attttatttt cttaggagaa atatgactca gttaagtact
    23641 aaaattttat ggttgtttgt tgcagcttta ggcgctattt gttttggtta tttagcttta
    23701 caaaatggcg aaagtgtatc agcgatttat ttggtggttg ctgctgtatg tatttatatg
    23761 ataggatata gattttatgg gagttttgta gcttataagg ttttagaact tgataaaaat
    23821 cgtgcaacac cagcacttgt agaaaatgat gggcgtgatt ttgtgcctac aaataaagct
    23881 gtattatttg gacatcattt tgctgctatt gcaggagcag gtccattagt aggacctatc
    23941 ttggccgctc aaatgggata tttgccttct atgctttgga ttttagtagg aggagtttta
    24001 gcgggtgctg tgcatgattt tgttgttctt tttatatcta ctcgtagaaa aggtagaagt
    24061 cttggcgaga tgattaagga tgagatgggt aaatttacag gtggagttgc tatggtggcg
    24121 atttttggca ttatgcttat tattattgcc attttagcta tggtggttgt aaaagcttta
    24181 gcagaatctc catggggttt atttactatc gcaatgacga ttcctatagc aatatttatg
    24241 ggaatttata tgcgttttat ccgtccaggt agagtagggg aggcttctat aataggtttt
    24301 gtgcttttaa ttttggctat tcattatggt agcgttatag ctgctgatcc ttattgggct
    24361 aaaatattta ctttagaagc tccaactttg gcaattgtta tgatggctta tggttttatt
    24421 gcttctgttt tacctgtgtg gtttttactt gctccaagag attatctttc aacttttttg
    24481 aaaatcggtg ttattgtggt aatggctgta gctattgttt tggttgctcc tgatttacaa
    24541 atgccaaaag caaatactca gtattttgat ggaacaggtc cagtatttgc aggtggagtg
    24601 tttccatttt tatttattac cattgcttgt ggtgcgatca gtggttttca tgctttgatt
    24661 tctagtggaa ctactcctaa aatgcttgaa aacgaaactc atactttggc tgttggatat
    24721 ggctctatgc ttgctgagag tgctgtggcg attatggctt taatttgtgc ttgtatttta
    24781 catccaggtc tttattttgc tataaattca agctctgctt tgataggaac agatgttgta
    24841 aatgtagcac aaactatttc aagttgggga tttagtatta ctcctgaaga aattactact
    24901 ttaaccacaa atataggaga gtatactata ctttcaagaa cagggggagc cccgactttt
    24961 gctataggtg tagctttgat cttgcatgaa ctttttggcg gcgtggattt gatggctttt
    25021 tggtatcatt ttgctatatt gtttgaagct ttatttattt taacagcggt ggatgctggg
    25081 acaagggctt gtcgttttat ggtgcaagat atattgggta atgtttataa acctttagga
    25141 gatattcata attatccagc tggacttttg gctacggctt taagtgttgc aggttgggga
    25201 tattttcttt atcaaggcgc cattgatcct aagggaggaa tttatacact ttggcctctt
    25261 tttggcgtga gcaatcaaat gcttgcgggt atggctttgc ttcttgctac aactatactt
    25321 gtaaaaatgg acaaggcaag atatacttgg gttactttag tacctgcggt atttgtctta
    25381 gtggcaactc tgtatggagg aattcaaaaa attatgcctt atgaagaagg caataaaata
    25441 gcaaatgcgg taagtcatgt agccgccgtt agcatacaaa gtcaaaaaat taaagattta
    25501 gaatttaaat taaataatac taaagatgaa aaagaaattt ctacaattag aaaagaaatt
    25561 tcaatagcca ctcaaaataa agttggaaat ttacttaatg caattctttg tgtgttcttt
    25621 atgatagcta ccttgcttgt tataatttct tgtataggaa tttgcttagg taaaattaaa
    25681 attcctctta aagaaactaa gtatattaag attgatgaat ttcaaaaaat ttaagtatta
    25741 ttatgaaaaa gccgaaaggt tttttcatcc cttggtggga ctttctagtt atgataagta
    25801 tttagaacac atgaaacaaa aacatccagg aaaaattcca aaaaccagag gggaattttt
    25861 caaagaatgt ctagataaaa aatataatag tggcggttta aataaatgct gataagctta
    25921 aaggataaag ttttatcata caaaataagc tttaagcatt taaaaagcca tgaattcttt
    25981 taagttcttc actaatagga tttttctttc catctcttgt aacacttaca taagttacta
    26041 aagccgaagt tacattaatg caagaagtac aaccttgaga atccactctt tgagctgtga
    26101 cttctacttc aacgctgatt gaagtgttgc ccacatttac aactttagag taacaagaaa
    26161 ttatatcgcc tataaaaaca ggttctttaa aaactacttt atccatagag atggttacaa
    26221 cgcgttcagg agaaagttct cttgctgcga tagctcctgc taaatcgatt tgtgaaagta
    26281 tccatccgcc aaaaatattt cctgctggat ttgtgtcact tggcatagct acaattttta
    26341 attttggttc tcccatatct ctcattttta ctccttattt taaaaaatga attataatta
    26401 aaaaagttaa aaaggagaat aaaagtatga ataattttaa agaaatagct aaattggtta
    26461 gaaaatacaa agaaagaaat aatgcgttat atgagttttt agacaaagaa gatgtgggcg
    26521 agtattttag atctttgatt tctttaagtg agttaaaaca agataaaaca actatgctag
    26581 ccatacttag gcgtttgatt gatttaaaag aagaaaattt agttcaagag tggaaaaaaa
    26641 acaactttaa ggaagataag attatagagt taaaacataa gttctatgaa gaggttagaa
    26701 agttttatga aaaagaacat caaaatttaa ttaatgaaat aaaagagaaa aaacttttaa
    26761 ataattttta tcagtcctta atacaaggag tgcataatat aggtttaatt atgaatattt
    26821 ttgaaatttc ttgg
//
LOCUS       DAPIVO010000016        26318 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.016, whole genome shotgun sequence.
ACCESSION   DAPIVO010000016 DAPIVO010000000
VERSION     DAPIVO010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 26318)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26318)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26318
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.016"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..263)
                     /locus_tag="RJ239_000646"
     CDS             complement(<1..263)
                     /locus_tag="RJ239_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3971 domain-containing protein"
                     /protein_id="HDV7330780.1"
                     /translation="MKKKILYIVVFFVVLILALFIVLKNGIVISSIQFDFLKLEQLYI
                     KLDKKLIVRAKNITINETQNSEISSQTHSSDNASTEILKITKN"
     gene            178..1179
                     /gene="mltG"
                     /locus_tag="RJ239_000647"
     CDS             178..1179
                     /gene="mltG"
                     /locus_tag="RJ239_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HDV7330781.1"
                     /translation="MTIPFLSTINKANISTTKNTTIYKIFFFIRNFFLIFILGIFYYL
                     TQPLKSNSVVFIPQGSISQIITYLKQNKYQMSNIDKYILFFLGHPQSGWINIGTKDLN
                     RAEFLHKLTIAKAALQTITLIPGETSVIFLEQAAKQLGLDKDILLKEFQAQAPYDEGV
                     FLPETYKIPKGITENLLIQMLLNHAEISNKKTSEKIFGDYNPKKWHQYIIIASVIQKE
                     AANDNEMPIVASVIYNRLKKGMKLQMDGTLNYGIYSHVKVTPQRIRQDNSSYNTYKFT
                     GLPKEAVCNVSLAAIRAAIFPLKTDYLYFVRDKNTGVHIFSTNIDDHNKAINLQKGK"
     gene            1260..1691
                     /gene="flgB"
                     /locus_tag="RJ239_000648"
     CDS             1260..1691
                     /gene="flgB"
                     /locus_tag="RJ239_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HDV7330782.1"
                     /translation="MINPFKSKELVTGALAGRNLRNQLINANLANVDTPFYKARDIEF
                     ETALVNRANEIFKKNDNKELQLAVTEEEHQKPWKFPDPSKSTIYLRDGHLARNDANTV
                     DLDVETTEMSKNTVMITALDGVLRRQSNIFSSILDASSKLS"
     gene            1701..2195
                     /gene="flgC"
                     /locus_tag="RJ239_000649"
     CDS             1701..2195
                     /gene="flgC"
                     /locus_tag="RJ239_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HDV7330783.1"
                     /translation="MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRR
                     REVIFKATDFDKLLNEQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKD
                     FRMKYDPSHPDANAEGYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTISQSAID
                     LLRG"
     gene            2202..2498
                     /gene="fliE"
                     /locus_tag="RJ239_000650"
     CDS             2202..2498
                     /gene="fliE"
                     /locus_tag="RJ239_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HDV7330784.1"
                     /translation="MNNINDLRLNNNISNTNKSQNSTGIGDEFAKMLKNEINDLNKAQ
                     ESGEAAMTDIATGQVKDLHQAAIAITKAESSMKFMLEVRNKAISAYKEITRTQI"
     gene            2505..4313
                     /locus_tag="RJ239_000651"
     CDS             2505..4313
                     /locus_tag="RJ239_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDV7330785.1"
                     /translation="MQEYKKNRVSKVAFAYCMALLFMIIFISSTFFLTSKRHIPNTEK
                     DQYALALRGSIITKDNFTITSSKQIYRAEIDLRSINKDKFDLFLKLFQIYSGISNDQV
                     ADIKKRMQNQKKRSYNFVLLQNLDSKQASYLKDLAKKLYIQGFFKAFTNNSGRVETRG
                     LNIIEHEEDRIYMSKDSFTPIIGYTKMILDPESGILKNIGVKGLEKYYDACLSPVQNE
                     KIQGLKDIGGNIILNLNSLQQKKINGCDLYLNLSLKLQKSIEKAIDQRNEDLKANEII
                     VGVMESKTGRILALASSRRYDPQNRGKDLSVLNASAIEYGYEAGSVIKPFIFTTALRL
                     GKIKMDEVINTYGGSYKLGRFTIKDDHKMDKMTMEEVIRYSSNIGMIQIAKRLNNIEI
                     VSGLKIFKFGEKSGIDLPYEQKGEIPNPKRLRDIEKSVLSYGYGLKTTFIQLLAAYNV
                     FNNDGFYITPRLAEKFYQNGRFTNLDDDVKKEKILSSEAAKTMQNVLINVIEKGTGKK
                     AITQGIIAGGKTGTARIAERQGYTSNRYNASFFGFANDLNHAYTIGVLVRHPTKPYSY
                     YAAQSALPMFKDVVDILINEEFLTPIQDNNQTSTNN"
     gene            complement(4310..5011)
                     /locus_tag="RJ239_000652"
     CDS             complement(4310..5011)
                     /locus_tag="RJ239_000652"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330786.1"
                     /translation="MISLVKFSDTAIEALRKESEHLYNNTYAVVAHAIGFSRKDIQSD
                     KSFKEILENKKWFSKNVDLDYLYQTRIKVLFEAIIDFSTKAQVYINDETKNHKIFTFK
                     MAAKNLAETTKNLKIIQANIKKYSSSSNEFLALEYNKIRSNLGELLRSIEELRVVEDR
                     EKLYLIIKNLQKGKEILKEIDTLTLSNVEHLISVRKITTAEGISILNDTTFAAKIAEE
                     LIGAVEVIFSKDISN"
     gene            complement(5165..5440)
                     /locus_tag="RJ239_000653"
     CDS             complement(5165..5440)
                     /locus_tag="RJ239_000653"
                     /inference="COORDINATES: protein motif:HMM:NF037997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
                     /protein_id="HDV7330787.1"
                     /translation="MLTGVIQSSTVIMAIIVAALLAQQISLENSLAATLGTSVGGVVT
                     AVLASLSTNIEGKKLAFANCIFNFGIAFLIVLIFPYFIHFLIFYPLR"
     gene            complement(5452..5934)
                     /locus_tag="RJ239_000654"
     CDS             complement(5452..5934)
                     /locus_tag="RJ239_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
                     /protein_id="HDV7330788.1"
                     /translation="MTNLGIGFKVFSGDLLEKILVKSTDTKIKSILFGTLSTLIMQFS
                     ILVSIVTISFLSAGLISLGAGIGIIFGVNLGNTASSWLIVGLTNIKILMLAIPLLIIG
                     VLFFFQKDSILKGLGNIFIGIGFFFLGVDYIKSGFENFKHIIDLSRFDFAGFKGVFVF
                     "
     gene            complement(6076..6510)
                     /locus_tag="RJ239_000655"
     CDS             complement(6076..6510)
                     /locus_tag="RJ239_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330789.1"
                     /translation="MLGIYLLIAALSFLALYFAVKKLTLNIDERTLLEPIKMDIYPKF
                     CDLIDEKIREFKENIQNANLTLKNSNQKDEFLEKLGDLSRELTFIQTMNLSNKNDSIW
                     QNELFSFLKELENLLLEYLEKGEEEAENLREFLMDEFEKLKG"
     gene            complement(6510..6827)
                     /locus_tag="RJ239_000656"
     CDS             complement(6510..6827)
                     /locus_tag="RJ239_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDV7330790.1"
                     /translation="MIENISASLWTKQDLNAYQIFDVRTPLEWEEGILPNAQCVALYD
                     NQGLLNAKFLDEFQSKRDESKKLAFICRSGHRSMVAAEFIAEKLGLESINLDGGMLAL
                     KGC"
     gene            complement(6824..8650)
                     /gene="htpG"
                     /locus_tag="RJ239_000657"
     CDS             complement(6824..8650)
                     /gene="htpG"
                     /locus_tag="RJ239_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HDV7330791.1"
                     /translation="MQFQTEVNQLLQLMIHSLYSNKEIFLRELISNASDALDKLNFLS
                     VSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLEN
                     LSGDAKKDSQLIGQFGVGFYSAFMVASKIEVLSKKALDDKAYLWSSDANGYEIDDANK
                     EEQGTSITLYLKDDEFANAYKIESIIEKYSNHIQFPIFMEKEEFTPAKEGEEEGKTEL
                     KISQINKANALWRMQKSSLKAEDYERFYEQNFHDSNKPLLYLHTKSEGKLEYNSLFFI
                     PQNAPFDLFRVDYQSGLKLYVKRVFISDDDKELLPTYLRFVRGIIDVEDLPLNVSREI
                     LQENQILKGIKEASVKKILGELEKLKNNDKEKYLSFFKTFGKVLKEGLYGFGGEKDSL
                     LKLMLYKSTKGENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQKNIEV
                     LLMDDEIDSLVTPMLEFEGLKFVSINQVEDKNELSDEEKNTFAPLVAKFKELLKDQVE
                     DVRLTSRLKDSPSCIVYDKNKPDFAMQQLLKQMGQEQNFKPILEINPKHAIFTGLKNN
                     ESFSADIATLVLNMAKLSEGMGVDNPAEFNASLTKIINKAFS"
     gene            complement(8722..9090)
                     /gene="crcB"
                     /locus_tag="RJ239_000658"
     CDS             complement(8722..9090)
                     /gene="crcB"
                     /locus_tag="RJ239_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HDV7330792.1"
                     /translation="MLNTLLVVGFGGFIGAILRMLSINLVNKFFPYSISFGTLFVNVL
                     GSFIIGLLFSYAQNKGLSPLLKSFISTGFLGAFTTFSTFSYQNLLLLQSGNYLHFALN
                     IILNVFLCLFAAWLGFLIFK"
     gene            complement(9084..9776)
                     /locus_tag="RJ239_000659"
     CDS             complement(9084..9776)
                     /locus_tag="RJ239_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HDV7330793.1"
                     /translation="MIYKKIKALYFWIFFVLSVALVIFCFCFTKSQNTLWKIRKIWAK
                     FQRYTISYKQEIIGTFNPQAQMILMNHQSALDIIALEELYPKNLCWIAKKELGEIPIF
                     KVAMKKPKLLCIDRKNPRDLVRVLKEAKERISEDRVLAIFPEGTRSKNEKMLKFQSGA
                     KILSEKLNLKVQPILIVDSAKILDTKSFSASSGVLKIICMDLVDTNDEKWLENTRKKM
                     QELLDQERAKLC"
     gene            complement(9757..10953)
                     /locus_tag="RJ239_000660"
     CDS             complement(9757..10953)
                     /locus_tag="RJ239_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HDV7330794.1"
                     /translation="MKILLTLIFSIVVLFGRGEISVFSGQDENMQKELQKLPQEEQKI
                     YQNIPPSDENNDFESNVDDPFVAKGSLVLTNDEYPSRVYVGEVFPITIYARTTENIKF
                     DFNISVEKTNLSFLNPDAKWEFINNEYKTTLWFEAKNSNASLSKISIKLLRNNEAFQE
                     ADINLNPIKFENTLFNKDFSHLVASSLEIKKVKASYFDDANIIMMIELNATNTNLKSF
                     FIEGIQKQGIENLKGDFNASSAFYYAILPLSKTNFEFSYFNKDSKKLENINLKLKISD
                     DEISTQSDLNPVNKDLNIYKQYALWFLAVLFGVLFVWRKNYIILALAVVCFALSFLVD
                     TNTQNAIIKAGSRAKILPTEPSTYFYTANADEKVEVLGKRQNYIKVLFSDGKIGWVNK
                     DDLQKN"
     gene            complement(10925..11596)
                     /gene="purQ"
                     /locus_tag="RJ239_000661"
     CDS             complement(10925..11596)
                     /gene="purQ"
                     /locus_tag="RJ239_000661"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase I"
                     /protein_id="HDV7330795.1"
                     /translation="MKVAIIRFPGTNCEFDTTYAFEKLGVKTQIVWHEEKEFDADLVV
                     LPGGFSYGDYLRCAAIAKLAPAMQGVFNHAKKGGYILGICNGFQILLESGLLKGAMKH
                     NNNLSFISKNQSLRVVSNDNAFLKNFKKDEIINLPIAHGEGNYYADETTLKELQDKDL
                     IILKYEPNPNGSVFDIAGICDENKKIFGLMPHPERACEKVLGNDVGLKMLKGFLLENF
                     INFNF"
     gene            complement(11598..11843)
                     /gene="purS"
                     /locus_tag="RJ239_000662"
     CDS             complement(11598..11843)
                     /gene="purS"
                     /locus_tag="RJ239_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HDV7330796.1"
                     /translation="MEVIVNISLKNGVLDPQGKAVEKALHSLNFNSVKEVKIAKQIKI
                     SLDEKDEKLAKEQVKKMCEELLVNSVIEDYELIIEKE"
     gene            complement(11852..12562)
                     /locus_tag="RJ239_000663"
     CDS             complement(11852..12562)
                     /locus_tag="RJ239_000663"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HDV7330797.1"
                     /translation="MTKKEMLYEGKGKKLFKTDDENLLISEFKDDLTAFNAEKRGNES
                     GKGALNCKISTEIFHLLEKNGIKTHLVEIISDTEQVVKKCKIVPIEVIVRNVATGSLT
                     KRLGIKDGTVLPFALVEFCLKDDALGDPFINDEHCLILNLVQNEAQISEIKNMARKIN
                     SILTPFFDNKNLRLIDFKIELGLTKDNELVLADEISPDSCRFWDKFSNEKLDKDRFRQ
                     DLGNVKMAYEEVLKRILN"
     gene            complement(12564..13898)
                     /locus_tag="RJ239_000664"
     CDS             complement(12564..13898)
                     /locus_tag="RJ239_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HDV7330798.1"
                     /translation="MMELILKTKRFFAGLAGFATTFILCLFLTSHLQAKVDQKEEQVQ
                     KRLEALDKLTKTLAIVEQYYVDDQNISDLVDKSLSGLLSNLDAHSSFLNEKDFNDMKI
                     QTNGEFGGLGITVGMKDGALTVVSPIEGTPADKAGIKSGDIILKINDEATLGINLNDA
                     VDKMRGKPKTQITLTIFRKGATKPFDVTLTREIIKIESVYAKMIENENILYLRVANFD
                     KNVVDVASKELKKYPNVKGVILDLRNNPGGLLNQAIGLVNLFVDKGVIVSQKGRIASE
                     NQEYKADPKNKISNASLVVLVNGGSASASEIVSGALQDLKRGVIVGENTFGKGSVQQI
                     IPINKTEALRLTIARYYLPSGRTIQAVGVKPDIEVFPGKVNTQEDGFSIKESDLKQHL
                     ESELEKIDKNKKEDKQENKDNKNLISQKQINDDAQLKSAIDTIKILNIKQGQ"
     gene            14016..14306
                     /locus_tag="RJ239_000665"
     CDS             14016..14306
                     /locus_tag="RJ239_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sensing transcriptional repressor"
                     /protein_id="HDV7330799.1"
                     /translation="MCQEKHTHTHSQKHLKAVCNRLSRTIGHLSAIKRMVENDKDCSE
                     ILIQLAAVKAEVNNTAKVVLKEHLAHCMVHAVEENDIQSIEELNKAIDMFMK"
     gene            14418..16991
                     /locus_tag="RJ239_000666"
     CDS             14418..16991
                     /locus_tag="RJ239_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDV7330800.1"
                     /translation="MANIQDFLTDNMLSNLESAASLAIHSKNNEVVPLHLLWALSVDS
                     TSILNQILNKLNISKEALELEIKSRISKLATSSNVNRENIRFSNELINSLENAKGLMS
                     ANGDSYLSVDTWLISESQKSPIKEILAQFLDLREFQKELESLRAGRKMDSKTSDETLD
                     SLNKFGIDLTLKASEGKLDPVIGREEEIERLMQILIRKTKNNPILLGEPGVGKTAIVE
                     ALAQRIIKKDVPKSLQNKKVIALDMSALIAGAKYRGEFEDRLKAVVNEVIKSENIILF
                     IDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTLKEYRKYFEKDAALQRRFQ
                     PVNVGEPSVNEALAMLRGIKEKLEIHHNVTINDSALVAAAKLSKRYIADRFLPDKAID
                     LIDEAAAELKMQIESEPSSLRKVRKDIETLEVENEALKMENDEKNQKRLDEIAKELAN
                     LKEKQNALNSQFENEKSVFDGISAKKKEIDLLKNEASLAKARGEFQKAAELEYGKIPS
                     LEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTSEKQKFLEVE
                     KHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF
                     LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAVRRKPYSVLLFDEV
                     EKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASNAIMNLSGKEQEDAV
                     KNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKDLQMSLENKGIKASLSENA
                     ALLIAKDGFDPDFGARPLRRAIYDLIEDKLSDMILADELHENDSIIIDAKDDEIIIKK
                     A"
     gene            complement(17019..18950)
                     /locus_tag="RJ239_000667"
     CDS             complement(17019..18950)
                     /locus_tag="RJ239_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HDV7330801.1"
                     /translation="MKILKYIFSFFTLLFITGFIYVAYLFTSADTEGYTFKEYKPPLT
                     TQIYDRNGKLVANIFEQHRFYAPYEELPPRLIEALVAIEDTSFFEHNGVNIDAIFRAA
                     VKIIKSGGKTMEGASTLTQQFIKNTELTPERTIARKIREALLAYKMETILTKEQILER
                     YLNFIFFGHGYYGVKTAALGYFHKNLNELSLKEIAMLVGMPKAPSSYDPTKHLDLSIS
                     RANNVISRMYNLGWISKADYDTAIKEIPQVYDDTLTQNAAPYVVDEVIKQLSPNIKDL
                     KTGGYKIILNIDLDVQNMAQNALKFGYDEIVKRDKDANLSTLNGAMVVVNHQSGDVLA
                     LVGGVDYEKSNYNRATQSMRQPGSSFKPFVYQVAINLGYSPMSEIADISRIFEGGAGN
                     NEDWKPKNEGGKFLGLITLKEALTRSRNLATINLALDMGLDVLYSKLMEFGFKDIPPN
                     LSIVLGSFGISPLEYSKFYTMFGNYGTIKDPQIIRQVQDKTGKTIMEFNSNERKVSDE
                     AQSFLVLDMMRNVVEKGTGRNARVKDIEIAGKTGTTNKSVDAWFCGLTPEIEAIIWYG
                     NDNNKPMRYTEGGARTAAPVFREFLTQYIEKFPDTTRKFSIPNGVYRGNYKGESAYYT
                     TKSPLPKANMKFNESEIIF"
     gene            complement(18947..19498)
                     /gene="maf"
                     /locus_tag="RJ239_000668"
     CDS             complement(18947..19498)
                     /gene="maf"
                     /locus_tag="RJ239_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HDV7330802.1"
                     /translation="MLILASSSISRANLLKTAKIDFRQVSFDYDENLNKNISPFLYVQ
                     KIVLEKERQFLSTLGKDFQNQNLLFADSIVCIDEKILTKAKDKKEAYEMLALQNGKYA
                     SILSAFLLVKPEKRVFSLSKTTLYFKNFDENALRDYVENDLYKGKAGCIMCEGFHQNF
                     ITQQVGNLSTALGLDIQTLKAYL"
     gene            complement(19498..22026)
                     /gene="alaS"
                     /locus_tag="RJ239_000669"
     CDS             complement(19498..22026)
                     /gene="alaS"
                     /locus_tag="RJ239_000669"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HDV7330803.1"
                     /translation="MDIRKAYLDFFASKGHEITPSSPLVPDDATLLFTNAGMVPFKSI
                     FTGEIPRPNPPRKTSCQTCIRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEQA
                     IAYAWEFVTEVLKLPKDRLYVTVHENDDEAFNLWQKHIQKERIYKFGDKDNFWQMGDT
                     GPCGPCSEIFYDQGQEHFNSSEDYMGGDGDRFLEIWNLVFMQYERSADGVLSPLPKPS
                     IDTGMGLERVTAIKEGKFSNFDSSLFMPIINEISKLCNKTYVYESGASFRVIADHIRS
                     SVFLLAQGVSFDKEGRGYVLRRILRRALRHGYLLGFKQAFMYKLVDVVCDLMGGHYTY
                     LNEKKDFIKEQIRLEEERFLSTIENGIEIFNEELKNTKEIFSGEVAFKLYDTYGFPLD
                     LTADMLREKNLKVDEEKFELFMNEQKARAKASWKGSGDKTASGDFKNLLEKFGENHFV
                     GYEKAECESKILALLDEDFKEVSTLKDAGWVMLENTPFYATSGGQSADSGFIAKREVL
                     DTQKFFNLNLSFIKAGEELKVNDIVHARIDTEKREQIARHHSATHLLHHALREILGSH
                     VSQAGSLVESNKLRFDFTHHKALNKEELESIEKRVNKMIINSSEAILENMPLEEAKKS
                     GAIALFNEKYQGNVRVLTLGESKELCGGTHVKNTAQIGSFYIVKESGVSAGVRRIEAV
                     VSKAALEFVKNQLEELSKVKDELKNNDILSGIKKLKNEILSLKNELKNSSKTELDSKN
                     IQGVEICVKRIDNGDIKAMIDDFKNKFAKAVILLIQVKDEKITLAAGVKDVPLKAGAL
                     VKEAAQILGGNGGGRDDFATAGGKDLSKINEALKQSLETIEKAL"
     gene            22141..23214
                     /locus_tag="RJ239_000670"
     CDS             22141..23214
                     /locus_tag="RJ239_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HDV7330804.1"
                     /translation="MNFINLQAQYLAYKDEINAEIESVLSSSSFIGGAKLNEFEQNLA
                     HFLGVKHAIGCSSGTSALYLALRVLDIGKDDEVIVPSFTFIATAEVVALVGAKPVFAD
                     INLSNYNLDFKAVQKAITSKTKAVIAVSMFGQMSDLRALEEILKDKNITLIEDGAQSF
                     GASFKGEKSCSIAKISCTSFFPSKPLGAYGDGGAIFCHDDEIAKKIRILLNHGQTQRY
                     KHEFIGINGRLDTLQAAILNVKLKYLEKELDKRQKLAQIYNANLKNCQIPQINPNAFS
                     AYAQYSVLVEDRASVLRKFEKANIPYAIHYPTPLHKQPCFSEFSNLELKNSEYASEHI
                     LSLPFSPFLSEEEQEQVICIFKD"
     gene            23219..24085
                     /locus_tag="RJ239_000671"
     CDS             23219..24085
                     /locus_tag="RJ239_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDV7330805.1"
                     /translation="MKIGIIGLGKMGQNHLNELSKNSHFKLNALFDLCKNPNLNIFDD
                     IFYDDLDKFLNQNNDIIIIATPTNSHLTIAKKVFKQCKCVLIEKPLALNLKEIDEISN
                     LAKEYSIKVGVGFCERFNPAVLALKKELENEEIISINIQRFSPYPQRISDVGILQDLA
                     VHDLDLLCFLSKQEITKTNLLKKYTQDQTRESESIILCGLEKCIASIHQSWNSTQKLR
                     KIHLITKNHFYEANLNDFSLLKDGNFIELTQQSPLFSEHEALLKLIDNQPNHLASTSD
                     AYKVQEILERFA"
     gene            24082..24993
                     /locus_tag="RJ239_000672"
     CDS             24082..24993
                     /locus_tag="RJ239_000672"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HDV7330806.1"
                     /translation="MKLVLFLNMGGATNLQDCEVFLKNMFNDPYILGIKNRFLRKFVA
                     WIITKARVKAMQENYKKMGGKSPLNELTQSLCDKLNLKQDEFKFDFVNLYVPPFATEI
                     LQKYTLNASDEIILFPLYPHHSCTTVTSSLEVLQNEISKQKIQAKVKTIDIFYKNELY
                     NEMIVSHILAKKSKFDAKILIFSAHSLPQSIIDKGDLYEKHVNDHVEILKEKLKDHFD
                     EFILAYQSKLGPVKWLEPNTSDVLANLNDKALIYPISFCIDCSETIFELGMEYKHLSK
                     YNYDLISCPNDSDEFMEFILKYLSDLN"
     gene            complement(25055..26277)
                     /locus_tag="RJ239_000673"
                     /pseudo
     CDS             complement(25055..26277)
                     /locus_tag="RJ239_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002882411.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
BASE COUNT         9363 a         4379 c         3665 g         8911 t
ORIGIN      
        1 aaattttttg ttatttttaa aatctctgtt gaagcattat cagaagagtg ggtttgtgat
       61 gaaatttcgg aattttgagt ctcatttata gtgatatttt ttgctcgtac aattaatttt
      121 ttatctaatt taatatataa ttgttccaat tttaaaaaat caaattggat actagagatg
      181 acaattccat ttttaagcac tataaacaaa gctaatataa gcacaacaaa aaatacaaca
      241 atatataaaa ttttcttttt catacgcaac ttctttttga tatttatttt ggggattttt
      301 tattatctaa ctcagccttt aaaaagcaat tctgtggtat ttattcccca aggttcaatt
      361 tctcaaatta taacatattt aaagcaaaat aaatatcaga tgagtaatat tgataaatat
      421 attttatttt ttttaggaca ccctcaatca ggctggatca acataggtac aaaagattta
      481 aatagagctg aatttctaca taaactcact attgctaaag cagcacttca aaccattact
      541 cttatcccag gagaaacaag cgtaatcttt ctagaacaag cagccaaaca acttggactt
      601 gataaagata tacttttaaa agaatttcaa gctcaagctc cttatgatga aggagttttt
      661 ttaccagaaa cttataaaat cccgaaaggc attacagaaa atctactcat tcaaatgctt
      721 ttaaaccatg ctgaaatttc caataaaaaa acttctgaga aaatttttgg tgattataat
      781 ccaaaaaaat ggcaccaata tatcatcatc gcttctgtaa tacaaaaaga agctgctaat
      841 gacaatgaaa tgcctatagt tgcaagcgta atttacaatc gacttaaaaa aggtatgaaa
      901 cttcaaatgg atggaacttt aaattatgga atttattccc atgtaaaagt taccccacaa
      961 agaataagac aagataatag ctcttataat acctataaat ttacaggatt gcctaaagaa
     1021 gcggtttgta atgtttcttt agctgctatt cgtgcagcta tttttccttt aaagacagat
     1081 tatttatatt ttgtgcgtga taaaaatact ggagttcata tttttagcac aaatatagat
     1141 gatcacaata aagccataaa tttacaaaaa ggaaaataat ttttgatatt tttatacaaa
     1201 atagttaaat tggaacagta tttgcttatt aatattaaaa attataaaaa ggataaaaaa
     1261 tgattaaccc atttaaatca aaagaactgg tcactggtgc tttagcgggt agaaatctaa
     1321 gaaatcaact catcaatgcc aatcttgcaa atgttgatac tcctttttat aaagcaagag
     1381 atattgaatt tgaaacagct ttggtaaatc gtgcaaatga aattttcaaa aaaaatgata
     1441 ataaagaatt gcaattagcc gtaactgaag aagagcatca aaaaccttgg aaattccctg
     1501 atcctagtaa atctactatt tacttaagag atggtcattt agcaagaaat gatgcaaata
     1561 ctgttgatct agatgtagaa accacagaaa tgagtaaaaa tacagttatg ataacagctc
     1621 ttgatggagt tttaagaaga caaagcaata tctttagttc tatacttgat gcaagctcta
     1681 aattaagtta aaggtaaatt atggcatact taagtgattt tgatattagt ggttatggtt
     1741 taagtgctca gcgttttaga atgaatgtta ttagctctaa tatagctaat gcaaacacta
     1801 caagaacagc tgaaggtggg ccttatagaa gacgcgaagt gatctttaaa gcaacagatt
     1861 ttgataagct tttaaatgag caaattaaca aagataataa ttttttaaaa tatgaaaatc
     1921 ctttaaatga tccaagttcg ccagaagaag ctaaacctgc tattcaaagt gttgtagtgg
     1981 ataaagtggt cagagatgac aaagattttc gtatgaagta tgatccaagc catcctgatg
     2041 caaatgctga aggttatgta gcgtatccaa atgtaaaccc tgttattgaa atggcagatt
     2101 tgattgaagc tacaagagct tatcaagcca atgtaagtgc ttttacaagt gcaaaaacta
     2161 tatctcaaag tgcgattgat ttattaagag gataataaaa aatgaacaat attaatgatt
     2221 taagattaaa taataatatt tcaaatacca acaaaagtca aaattccaca ggaattggtg
     2281 atgaatttgc caagatgctt aaaaatgaaa tcaatgattt aaataaagca caagaaagtg
     2341 gagaagctgc aatgacagac attgccacag gacaagtaaa agatttacat caagcagcta
     2401 tagctatcac taaagctgaa agcagcatga aatttatgct agaagtaaga aataaagcaa
     2461 tcagtgctta taaagaaatc acaagaactc aaatttaaac cctaatgcaa gaatataaaa
     2521 aaaatagggt ttcaaaagtt gcctttgcct actgcatggc acttttgttt atgattattt
     2581 ttatcagctc tacttttttt cttacatcaa aacgtcatat acctaacact gaaaaagatc
     2641 aatacgctct tgctctaaga ggatcgatta taaccaaaga taattttact atcacaagtt
     2701 ctaaacaaat ttatcgtgct gaaattgatc ttagaagcat taacaaagat aaatttgatc
     2761 tatttttaaa gctttttcaa atttatagtg ggataagtaa cgatcaagta gcagatatta
     2821 aaaaaagaat gcaaaatcaa aaaaaacgct cttataattt tgttctttta caaaacttag
     2881 actccaagca agcaagctac cttaaagatc ttgctaaaaa actttatata caaggttttt
     2941 tcaaagcttt tacaaataac tcaggaagag ttgaaacaag aggattaaat atcatcgaac
     3001 atgaagaaga tagaatttac atgtcaaaag attcttttac tcctattatc ggttatacta
     3061 aaatgatatt agatccagaa agtggaattt taaaaaatat aggagttaaa ggtttagaaa
     3121 aatactacga tgcatgtcta agccctgttc aaaatgaaaa aattcaagga cttaaagata
     3181 taggtggaaa tattatttta aatctaaatt cactacaaca aaaaaagatc aatggttgtg
     3241 atttatattt aaatctttct ttaaaactgc aaaaaagtat agagaaagct atagatcaaa
     3301 gaaatgagga tttaaaagcc aatgaaatca tcgttggggt aatggaaagt aaaacaggaa
     3361 gaattttagc tctagcaagc tcaaggcgtt atgacccaca aaatcgcgga aaggatctat
     3421 cagttcttaa tgcaagcgct atagaatacg gctatgaagc aggttctgtt atcaaacctt
     3481 ttatctttac aacagcctta agacttggta aaataaaaat ggatgaagtg attaatactt
     3541 atggcggttc ttacaagcta ggacgtttca ccatcaaaga cgatcacaaa atggacaaaa
     3601 tgactatgga ggaagttata agatattctt caaatatagg catgatacaa attgctaaaa
     3661 ggcttaacaa tatagaaatc gtatcaggac ttaaaatatt taaatttggc gaaaaaagtg
     3721 gtattgatct accctatgaa caaaaaggag aaattccaaa tcctaagcgc ttaagagata
     3781 tagaaaaatc tgttttaagt tatggttatg gacttaaaac aacctttata caactccttg
     3841 cagcttataa tgttttcaac aatgatgggt tttatatcac accacgttta gctgaaaaat
     3901 tctatcaaaa tggacgcttt acaaatcttg atgatgatgt aaaaaaagaa aaaattcttt
     3961 ctagcgaagc cgctaaaacg atgcaaaatg ttcttataaa tgttatagaa aaaggaacag
     4021 gaaaaaaggc aattacacaa ggtattattg caggaggtaa aacaggaacg gcaagaatag
     4081 ccgaaagaca aggttacacc tcaaatcgct acaatgcatc cttttttggt tttgcaaatg
     4141 atttaaatca cgcctatacc ataggagttc tcgtaagaca tcctactaaa ccttatagtt
     4201 attatgctgc acaaagtgct ttgcctatgt ttaaagatgt tgttgatatt ttaatcaatg
     4261 aagaatttct aacgcctata caagacaata accaaactag cacaaacaac tagtttgata
     4321 tatctttaga aaatatcacc tcaacagcac ctataagttc ttcagcaatc ttagcagcaa
     4381 aagttgtatc attaagtatt gaaattcctt cagctgttgt gatttttctt actgaaataa
     4441 gatgttcaac attgctcaag gttaaagtat cgatttcttt taaaatttct tttccttttt
     4501 gaagattttt aataatcaaa taaagctttt cacgatcttc aacaactcta agctcttcga
     4561 tacttcttaa aagctctcct aaattcgatc taattttatt gtactctaaa gccaaaaatt
     4621 cattagaaga actagaatat ttcttaatat ttgcttggat aatttttaaa tttttagttg
     4681 tttcggctaa atttttagct gccatcttaa aggtaaaaat tttatgattc tttgtttcat
     4741 cgttaatata aacttgtgct ttagttgaaa aatcgataat agcttcaaaa agaaccttta
     4801 tcctagtttg atacaaatag tccaaatcca catttttact aaaccacttt ttattttcta
     4861 aaatttcttt aaaactttta tcactttgta tatctttacg actaaaacct atagcatgag
     4921 caacaactgc ataggtattg ttataaagat gctcgctttc tttccttaaa gcttcgatgg
     4981 ctgtgtcact aaatttaacc aaactaatca agatataaag gcttgtcttt attcttatct
     5041 ttaggagctt ttactatttt atttaaaaaa acaatttaag gagtaaagaa tgaaaaaaac
     5101 gcaacaccaa ttaaattaaa caaagtgtga aataatgcca ctttcaaagc tatatcttct
     5161 atgtttaacg caatggataa aaaattaaga aatgtataaa ataaggaaaa ataagcacta
     5221 ttaaaaaagc tataccaaaa ttaaaaatac aatttgcaaa cgctaatttc tttccttcaa
     5281 tattggtact taaagaagct aaaacagccg ttacaactcc tccaacacta gtacccaaag
     5341 ttgctgctaa ggaattttcc aaactgattt gttgtgcaag taaagcagcg acaataatag
     5401 ccattataac tgtgcttgat tgtataactc ctgtaagcaa agcacctaat cctaaaaaac
     5461 aaaaactcct ttaaaaccag caaaatcaaa acgagaaaga tcaattatat gtttaaaatt
     5521 ttcaaaacca cttttaatat aatccacacc caaaaagaaa aaacctatac caataaaaat
     5581 attacccaaa ccttttaaaa tactatcttt ttgaaagaaa aataatactc caataatcaa
     5641 aagcgggata gccaacatta aaattttaat atttgttaaa ccaacaatca gccaagaact
     5701 tgccgtattt cctaaattta ctccaaaaat aatccctatg cccgcaccca aagaaataag
     5761 ccctgcactc aaaaaagaaa tcgtaacaat agaaactaaa attgaaaatt gcataattaa
     5821 agtacttaaa gtaccaaaaa gtatactttt tatctttgta tcagttgact ttactaaaat
     5881 tttttcaagc aaatcaccac taaaaacttt aaaacctata cctaaattag tcattccaat
     5941 aagaagtatt gccactcctg ctaaaagatt agcaagctcg tcataacgaa ttaaaataaa
     6001 aatcagaact aaagtaaaaa tacttcatga aataaattta aaatatttta aagaatttcc
     6061 ttcttcttgc aatgcctaac cttttagttt ttcaaattca tccatcagaa attctcttaa
     6121 attttcagct tcttcttcgc ctttttctag atactcaagc aataaatttt ctaattcttt
     6181 taaaaaagaa aaaagttcat tttgccagat actatcgttt ttattgctca aattcatggt
     6241 ttgtatgaaa gtcaactctc tgcttaaatc cccaagtttt tctaaaaatt catctttttg
     6301 attagaattt tttaatgtta aattagcatt ttggatattt tctttaaatt ctctgatttt
     6361 ttcatcgatt aaatcacaaa attttggata aatatccatt ttaataggct ctaaaagggt
     6421 tcgctcatct atatttaaag taagcttttt aacagcaaaa taaagagcta aaaaagacaa
     6481 agctgctatg agtaaataaa ttcctagcat taacaaccct taagggctag cattccgcca
     6541 tctaaattga tgctttcaag tcccaatttt tcagctataa attcagctgc aaccatgctt
     6601 ctatggccac tacgacaaat aaaagcaagt tttttacttt catctctttt gctttgaaat
     6661 tcatctaaaa atttagcatt taaaagccct tgattatcat ataaagccac acattgcgca
     6721 ttaggtaaaa taccttcttc ccattctaaa ggagtacgca catcaaaaat ttgatatgcg
     6781 tttaaatctt gctttgtcca aagacttgca gagatatttt ctatcatgaa aaagccttgt
     6841 tgatgatttt tgtaaggctt gcattaaatt cagcaggatt atccactccc ataccttcgc
     6901 ttaattttgc catatttaaa actaaggttg ctatatctgc actaaagctt tcgttgtttt
     6961 taagacctgt aaaaatagcg tgttttggat tgatttctaa aataggtttg aaattttgtt
     7021 cttgacccat ttgttttaag agttgttgca tagcaaaatc aggtttattt ttatcataaa
     7081 ctatacaact tggactatct ttcaaacgac tggttagtct tacatcttca acttgatctt
     7141 ttagaagttc tttaaattta gctacaagtg gagcaaaagt atttttttct tcgtcgctta
     7201 gttcattttt atcttctact tgattaatgg atacaaattt taaaccttca aattctagca
     7261 taggagttac taaagaatca atctcatcgt ccatgagtaa aacttctata tttttttgtt
     7321 tatactcttc aagtaaaggg gaggttctta ataaactttc attatttcct gctatataaa
     7381 aaatttcctt ttgttcgcct tgaaggtcat ttttatactc ctctaaagag cgtaaatttt
     7441 cacctttagt gcttttataa agcatgagtt ttaaaagact atctttttct ccgccaaaac
     7501 cataaagtcc ttcttttaat accttaccaa aggttttaaa gaaagataag tatttttctt
     7561 tatcattgtt tttgagtttt tcaagttcac ctaaaatctt tttaacgcta gcttctttga
     7621 taccttttaa aatttgattt tcttgtaaaa tttcacgact tacattaagt ggtaaatctt
     7681 ctacatcgat aatcccccgc acaaaacgca aataagttgg taaaagttct ttatcgtcat
     7741 cgctgataaa tacgcgtttt acataaagtt ttaagccact ttgataatcc acacggaata
     7801 aatcaaaagg tgcattttgt ggtatgaaaa ataaagaatt gtattctaat tttccttcac
     7861 ttttagtgtg aagataaagt aaaggtttgt ttgaatcatg aaaattttgc tcataaaatc
     7921 tttcataatc ttctgcttta aggcttgatt tttgcattct ccataaagca ttggctttat
     7981 tgatttgaga aattttaagt tcagttttcc cttcttcttc gccttcttta gcaggagtaa
     8041 attcttcttt ttccatgaaa attggaaatt gaatgtgatt agagtatttt tctataatgc
     8101 tttcgatttt ataagcatta gcaaactcat catcttttaa atataaagta atgcttgttc
     8161 cttgttcttc tttgtttgcg tcatcaatct cataaccatt tgcatcagaa ctccaaagat
     8221 aagctttatc atctaaagct tttttactta aaacttcgat tttactagcc accataaaag
     8281 cagaataaaa acctactcca aattgtccta tgagttgaga atctttttta gcatcaccgc
     8341 ttaaattttc taaaaagctt ttagtaccgc tttttgctat ggttccaagg ttgttgataa
     8401 gatcatcttt atccatacct atgccattat cactaatact taaagttttt ttatctttat
     8461 caattttgat ttcaatttta ggttcgaatt ttaagctttt atatttatca tcacttacgc
     8521 ttaaaaaatt aagcttatct aaagcatcgc ttgcgtttga aataagttct cttaaaaaaa
     8581 tttctttatt agaatataaa gagtgtatca taagctgtaa aagctgatta acttcggttt
     8641 gaaattgcat tttgattcct ttgtaatttt ttaaagtggt attttagcaa aaaatacaaa
     8701 ttctaaagta aatttaaaga tttatttgaa aattaaaaag ccaagccatg cggcaaataa
     8761 gcaaagaaag acatttaaga taatatttaa cgcaaaatga agataatttc cactttgcaa
     8821 aagaagtaaa ttttgataag aaaaagtaga aaaagttgta aaagctccta aaaaacctgt
     8881 acttataaag cttttaagta aaggagataa acctttattt tgtgcataag aaaacaaaag
     8941 tcctatgata aaagaaccca aaacatttac aaaaagagtt ccaaagctga tagaataagg
     9001 aaaaaattta ttcactaaat ttatagaaag cattcttaat attgctccta taaatccccc
     9061 aaaaccaact actaaaagag tgtttaacaa agcttagctc tttcttgatc gagtaattct
     9121 tgcatttttt ttctggtgtt ttcaagccat ttttcatcat ttgtatcgac taaatccata
     9181 caaatgattt taagtactcc gctgcttgca ctaaaacttt ttgtgtctaa aatttttgca
     9241 gaatccacaa ttaaaatagg ttgaacttta agatttaatt tttcacttaa aatttttgct
     9301 ccactttgaa atttaagcat tttttcattt ttagatctag ttccttctgg aaaaatagcc
     9361 aaaaccctat cttcactaat tctttctttt gcttctttta aaactcgcac caaatcacgc
     9421 ggattttttc tatctataca aagaagtttt ggttttttca tagcaacttt gaaaatagga
     9481 atttctccta attctttttt ggcaatccag cataaatttt taggatataa ttcttctaaa
     9541 gcgatgatat ctaaagcact ttgatgattc attaaaatca tctgagcttg tggattaaaa
     9601 gtaccaatga tttcttgttt ataagagata gtatatcttt gaaatttagc ccaaattttg
     9661 cgaattttcc aaagtgtgtt ttgagatttt gtaaagcaaa aacaaaaaat caccaaagca
     9721 acacttaaaa caaaaaaaat ccaaaaataa agagctttaa tttttttgta aatcatcttt
     9781 attaacccaa cctatttttc catcagaaaa caatacttta atataatttt gtcttttgcc
     9841 caaaacttct actttttcat ctgcatttgc cgtataaaaa taagttgaag gctctgtagg
     9901 taaaatttta gccctagaac cagccttgat aattgcattt tgagtattgg tatctacaag
     9961 aaaactaagt gcaaaacaaa caactgccaa agccagaata atgtaatttt ttctccatac
    10021 aaataaaact ccaaataaaa ccgctaaaaa ccacaaagca tattgtttat aaatatttaa
    10081 gtctttattt acaggattta aatcactctg agtactaatc tcatcgtcac taatttttaa
    10141 ttttaaattt atattttcaa gctttttact gtccttattg aaatacgaaa attcaaaatt
    10201 tgttttactt aatggcaaaa tagcataata aaaagcgcta gaagcattaa aatccccttt
    10261 taaattttca ataccttgct tttgaattcc ttctataaaa aagcttttaa gatttgtatt
    10321 ggttgcgttt agttctatca tcataatgat attagcatca tcaaaataac tcgctttaac
    10381 ttttttaatt tccaaagaac ttgccacaag gtgtgaaaaa tctttattga ataaagtatt
    10441 ttcaaatttg ataggattaa gattgatatc agcctcttga aaagcttcat tatttctaag
    10501 aagtttgata gaaattttac tcaaactagc atttgaattt ttggcttcaa accataaagt
    10561 tgttttatat tcattgttga taaattccca ttttgcatct ggattcaaaa aagataagtt
    10621 agttttttct acgcttatgt taaaatcaaa ttttatattt tccgtagtgc gagcatagat
    10681 cgtaatagga aaaacttctc caacatatac tctacttgga tattcatcat ttgtaagaac
    10741 caaactccct ttggctacaa aaggatcatc tacattgctt tcaaagtcat tgttttcatc
    10801 acttggcgga atattttgat aaattttttg ttcttcttgg ggtaattttt gtaattcttt
    10861 ttgcatattt tcatcttggc cgctaaatac agaaatttca cccctgccaa acaatacaac
    10921 aatgctaaaa attaaagtta ataaaatttt caagtaaaaa gcctttaagc atttttaaac
    10981 ctacatcatt acctagaact ttttcacaag cacgctcagg atggggcatg agtccaaaga
    11041 tttttttgtt ttcatcacaa attcctgcga tatcaaatac agaaccattt ggatttggct
    11101 cgtattttag aataataaga tctttatctt gcaattcttt taaagtagtc tcatcagcgt
    11161 aataatttcc ctctccatgg gcaattggta aattaataat ttcatctttt ttgaaatttt
    11221 tcaaaaaggc attatcatta gaaaccactc ttaaactttg gttttttgag ataaagctaa
    11281 gattgttgtt atgcttcatt gcacctttta aaagaccgct ttcaagtaaa atttgaaaac
    11341 cattacaaat acctaagata tatcctcctt tttttgcatg attaaaaaca ccttgcatag
    11401 caggagcaag ttttgcaata gctgcgcatc ttagataatc tccataagaa aatcctcctg
    11461 gtaaaacaac taaatctgca tcaaattctt tttcttcatg ccaaacaatc tgcgtcttta
    11521 ctccaagttt ttcaaaggca taagttgtat caaattcaca atttgtccct ggaaatctaa
    11581 taatagcaac tttcatttta ttctttctca attataagct cataatcttc aatgacgcta
    11641 tttaccaaca actcttcaca catttttttt acttgttctt tggctaattt ttcatctttc
    11701 tcatcaagag aaattttgat ttgttttgct atttttactt ctttaacact attaaaattt
    11761 aaagaatgca aagctttttc caccgctttg ccttgtggat ctaaaacccc attttttaaa
    11821 gaaatattta caataacttc catatttttc cttaatttaa tattcttttt aaaacttctt
    11881 cataagccat ttttacatta cctagatctt gacgaaatct atctttatct aatttttcat
    11941 tactaaattt atcccagaat ctacaactat cagggcttat ttcatcagct aaaacaagct
    12001 cattatcttt agttaaaccc agttcgattt taaagtcaat caaccttaaa ttcttattgt
    12061 caaaaaatgg agttaaaata gagttgattt tcctagccat atttttaatt tcactaattt
    12121 gagcttcatt ttgcactaaa tttaaaatca aacaatgctc atcattgata aaaggatcgc
    12181 ctaaggcatc atctttaaga caaaattcca ccaaagcaaa aggtagcaca gtgccatctt
    12241 taatgcccag tctttttgta agagaacctg ttgcaacatt gcgtactata acttcaatag
    12301 gaacaatttt acatttttta accacttgtt ctgtatcgct tataatttct accaaatggg
    12361 ttttaatccc atttttttca agcaaatgaa aaatttcagt actgatttta cagtttaatg
    12421 caccttttcc actttcattg cctctttttt ctgcattaaa agcagttaaa tcatctttaa
    12481 actcactaat tagtaaattt tcatcatcag ttttgaaaag ttttttacct tttccttcat
    12541 aaagcatttc tttttttgtc attttattgt ccttgtttga tatttaaaat tttaatagta
    12601 tcaatagctg attttaactg tgcgtcatca ttgatttgtt tttgactgat tagattttta
    12661 ttgtctttat tttcttgttt atcttctttt ttatttttat ctattttttc aagctcactt
    12721 tctaaatgtt gttttaagtc gctttctttt atagaaaaac catcttcttg agtatttact
    12781 ttacctggaa aaacttcaat atcaggtttt acacccactg cttgaatagt acgcccgctt
    12841 ggaagataat atcttgcaat agtaagcctt aaagcttcag ttttattaat aggtatgatt
    12901 tgctgaacac taccttttcc aaaagtattt tcacccacaa taacaccgcg tttaagatct
    12961 tgtaaagctc cgcttacgat ttcacttgca ctagcacttc caccatttac aagcacaacc
    13021 aaagaagcat tagaaatttt gtttttagga tcggctttat attcttgatt ttcacttgcg
    13081 atgcgtcctt tttgagaaac aataacacct ttatctacaa ataaatttac aagtcctatg
    13141 gcttgattta aaagtccacc aggattattt ctaagatcta aaataactcc tttaacatta
    13201 ggatattttt taagttcttt acttgccaca tctacaacat ttttatcaaa atttgcaacc
    13261 ctaagataaa gaatgttttc attttctatc atttttgcat aaacactttc tatcttaata
    13321 atttctcttg taagtgtaac atcaaaaggt tttgttgcac cttttctaaa aatagttaaa
    13381 gtgatttgag tttttggctt accacgcatt ttatctacag catcattgag attaattcct
    13441 aaagtggcct catcattaat ttttaaaata atatctcctg attttatccc tgctttatct
    13501 gctggtgttc cttctatagg agaaacaact gttaaagcac catctttcat acctacggtt
    13561 ataccaaggc caccaaattc gccattggtt tgaattttca tatcattaaa atctttttca
    13621 tttaaaaaag aagaatgcgc atcaagattg cttaaaagtc ctgataaaga tttatccacc
    13681 aaatcgctga tattttgatc atccacatag tattgctcta ctatggcaag agtttttgta
    13741 agcttatcta aagcttctag gcgtttttga acctgctctt ctttttgatc aactttagct
    13801 tgtaaatgac ttgttaaaaa tagacataaa atgaaagtag tggcaaagcc tgcaagaccc
    13861 gcaaaaaatc gttttgtttt caaaataagc tccatcattg agttttagtt taaagagtaa
    13921 attttaataa aaattgctta aaaattcgta aataaattta aattcttaaa aatatgttaa
    13981 aatagactaa aaatttcaaa aagaaagtta atacaatgtg ccaagaaaaa catactcata
    14041 cacattctca aaaacatctt aaagcagttt gcaatcgtct aagtagaacc ataggacatt
    14101 taagcgctat taaaagaatg gttgaaaatg acaaagactg tagtgaaatt ttaatccagc
    14161 ttgctgccgt aaaagccgaa gttaacaata ctgcaaaagt agttttaaaa gaacatttag
    14221 ctcattgtat ggtacacgcc gtagaagaaa atgatattca aagtatagaa gaattaaaca
    14281 aggctataga tatgtttatg aaataatcta aaattagtca tttgtcctat tatttaaaaa
    14341 attttactca attaacttga cattatatga ctaaagttat ataatagcaa gtctataaac
    14401 taaataaagg ataaaacatg gcaaatatac aagatttttt aactgataat atgctttcaa
    14461 accttgaaag tgcagcatct ttagctatac attctaaaaa taatgaagtt gtacctttac
    14521 atcttttatg ggctttaagc gtagatagta caagtatttt aaatcaaatt ttaaataaat
    14581 taaatatttc taaagaagcc ttagagcttg aaattaaaag cagaatttca aaacttgcaa
    14641 cgagttcaaa tgtaaaccgt gaaaatatac gcttttccaa tgaacttata aattcattag
    14701 aaaatgctaa aggattaatg agtgctaatg gagatagtta tttaagtgtg gatacttggc
    14761 ttataagtga aagtcaaaaa agtcctatta aagaaatttt ggcgcaattt ttagatttaa
    14821 gagaatttca aaaagagctt gaaagtctaa gagcgggacg aaaaatggat agcaaaacaa
    14881 gcgatgaaac tttagatagc ttaaataaat ttggtataga tttaacctta aaagcaagcg
    14941 agggtaaact tgatcctgtt ataggcagag aagaagaaat cgaacgtttg atgcaaattt
    15001 taatacgtaa aaccaaaaat aaccctatac ttttaggtga accaggcgta ggaaaaacag
    15061 ctatagtaga agctttagca caaagaatta ttaaaaaaga tgttccaaaa tctttgcaaa
    15121 ataaaaaagt catcgctctt gatatgagtg ctttaattgc aggtgcaaaa tacagaggag
    15181 aatttgaaga tagattaaaa gctgtggtta atgaagtgat aaaaagtgaa aatatcattc
    15241 tttttatcga tgaaattcac actatagtag gagctggagc gagtgaaggc agcatggatg
    15301 cggcaaatat tttaaaacct gctcttgcaa gaggtgaact ccataccata ggcgcaacta
    15361 ctttaaaaga atatcgtaaa tattttgaaa aagatgcagc cttgcaacgc cgttttcaac
    15421 ctgtaaatgt aggtgagcca agtgttaatg aggctttggc tatgttaagg ggtataaaag
    15481 aaaagcttga aattcatcat aatgtaacca taaatgatag tgctttagta gccgcagcta
    15541 aactttcaaa gcgttatata gcagatcgtt ttttacctga taaggccatt gatttaatcg
    15601 atgaagctgc agctgaactg aaaatgcaaa ttgaaagcga accaagttct ttaagaaaag
    15661 tacgcaaaga tatagaaact ttagaagttg aaaatgaagc tttaaaaatg gaaaatgatg
    15721 aaaaaaatca aaaaagactc gatgaaatcg caaaagaact agctaattta aaagaaaaac
    15781 aaaatgccct aaattcacag tttgaaaatg aaaaaagtgt ttttgatggc ataagtgcta
    15841 agaaaaaaga aattgatctg cttaaaaatg aagcttcttt ggctaaagct agaggtgaat
    15901 ttcaaaaagc agccgagcta gagtatggaa aaattccaag tcttgaaaaa gaagtagaaa
    15961 ttttagaaga taaatggaaa aaaatgagtg aaaatggagt tttacttaaa aatcaagtag
    16021 atgaggattt ggttgctgga attttaagca aatggacggg tattagcgtg caaaaaatgt
    16081 taacttctga aaaacaaaaa ttcttagaag tggaaaaaca tttaaaagaa agtgtcatag
    16141 gacaagataa ggccttaagt gctttagcta gagccattaa acgtaacaaa gcagggctta
    16201 atgcggacaa taaacctata ggaagctttt tatttttagg gccaacaggg gtaggaaaaa
    16261 cacaatcggc taaagctttg gcaaaatttt tatttgatga tgaaaaagca atgattcgct
    16321 ttgatatgag tgaatttatg gaaaaacata gtgtttcaag actcttaggt gcgcctccag
    16381 gatatatagg acatgaagaa ggtggagagc ttactgaagc cgtacgaaga aaaccttata
    16441 gcgtgctttt gtttgatgaa gttgaaaaag cacataaaga tgtatttaat gtgcttttag
    16501 ggattttaga tgatggtaga gcaaccgata gcaaaggtgt aacagtggat tttaaaaata
    16561 ccattatcat tctaacttct aatatcgcct caaacgctat tatgaattta agcggaaaag
    16621 aacaagaaga tgcggtaaaa aatgagttaa aaaatttctt taaacctgag tttttaaacc
    16681 gtttagatga tattatcacc tttaatccac ttggaaaaga tgaagcttat gaaatagtca
    16741 agcttttatt taaagattta caaatgagct tagaaaacaa gggaataaaa gcaagtttaa
    16801 gcgaaaatgc agccctttta atcgctaaag atggttttga ccctgatttt ggtgctagac
    16861 ctttaagaag agctatttat gatcttatag aagataaatt aagcgatatg atacttgctg
    16921 atgaacttca tgaaaatgat agcattatca ttgatgcaaa agatgatgaa ataatcatca
    16981 aaaaagctta atcattttga aagtagatct ttctactttc aaaatataat ctcgctttca
    17041 ttaaatttca tatttgcttt tggtaatggt gatttggtgg tataataagc actttctcct
    17101 ttataatttc cacgataaac tccattagga atgctaaatt ttctagttgt atcagggaat
    17161 ttttctatat attgagttaa aaattctcta aacacaggag cagctgttct agccccacct
    17221 tctgtataac gcataggctt gttgttatca tttccatacc aaatgattgc ttctatttca
    17281 ggcgtaagtc cacaaaacca agcatcaaca cttttattcg ttgttcctgt ttttcctgct
    17341 atttctatat cttttactct tgcattacgc cctgtgcctt tttcaacaac atttctcatc
    17401 atatctaaaa ccagaaaact ttgcgcttca tcgctgactt tacgctcatt tgagttaaat
    17461 tccatgatgg ttttaccagt tttatcctga acttgtctga taatttgagg atctttaatc
    17521 gtaccatagt tcccaaacat ggtataaaat ttcgaatact ccaaaggaga aataccaaaa
    17581 cttcccaata cgattgataa attaggcggt atatctttaa atccaaattc cattagttta
    17641 gagtaaagaa catcaagccc catatcaagt gcgagattaa tggtagctaa atttcttgat
    17701 cttgttaaag cttcttttaa ggtaattaaa cctaaaaatt tacccccttc atttttaggt
    17761 ttccaatcct cattattacc cgctccacct tcaaaaattc tagaaatatc agcaatttca
    17821 ctcataggcg aatatcctaa attaatcgcc acttgataca caaaaggttt aaaagagctt
    17881 ccaggttgac gcatactttg agtagcgcgg ttataattac ttttttcata atcaactcca
    17941 cctaccaaag ctaaaacatc accactttga tgatttacca cgaccatagc tccgtttaaa
    18001 gtgcttaaat ttgcatcttt atcgcgtttt actatctcat cataaccaaa ttttaaagca
    18061 ttctgtgcca tattttgaac atctaagtct atatttaaaa tgattttata tccacctgtt
    18121 tttaagtctt tgatattagg gcttaattgt ttaatcactt catctacgac ataaggagca
    18181 gcattttgag taagcgtatc atcataaact tgcggaattt ctttaatggc tgtatcataa
    18241 tctgcttttg aaatccaacc tagattatac attcttgaaa taacattatt tgctcttgag
    18301 atggaaagat ctaaatgctt tgtaggatca taactgctag gtgcttttgg catacctact
    18361 agcatagcaa tctctttaag gcttagttca tttaaatttt tatgaaaata ccccaaagct
    18421 gcggttttta ctccataata cccatgtcca aaaaagataa aatttaaata cctttctaaa
    18481 atttgttcct tagttaaaat ggtttccatt ttataagcaa gcaaagcttc tcgaatttta
    18541 cgcgcaatag ttctttctgg ggttaattcc gtgtttttaa taaattgctg agtaagagtg
    18601 gaagctcctt ccatggtttt tccaccactt tttataattt ttacggcagc tctaaaaatg
    18661 gcgtcgatat taactccatt atgttcaaaa aagcttgtat cttctatagc aaccaaagct
    18721 tctataaggc gtggaggaag ctcttcataa ggagcgtaaa aacgatgttg ttcaaaaata
    18781 ttagccacaa gcttgccatt tctatcgtaa atttgtgttg taagaggagg tttgtattct
    18841 ttaaaagtat aaccctcagt atcagcactt gtgaaaagat aagccacata aataaatcca
    18901 gttataaaca aaagagtaaa aaatgaaaaa atatatttta atattttcat aaataagcct
    18961 ttaaagtttg gatatcaagc cctaaagcag tgcttagatt tcctacttgt tgggtgatga
    19021 aattttgatg aaaaccctca cacataatac aacccgcctt gcctttataa agatcatttt
    19081 ctacataatc tcttaaagca ttttcatcaa aatttttaaa ataaagtgta gtttttgaaa
    19141 gagaaaaaac tcttttttca ggttttacaa gcaaaaaagc cgataaaata cttgcatact
    19201 ttccattttg caaggcaagc atttcataag cttctttttt atcctttgct ttggtaagaa
    19261 ttttttcatc tatacaaact atactatctg caaaaagcaa attttggttt tgaaaatctt
    19321 tgcctaaagt acttaaaaat tgtctttctt tttcaagaac tattttttga acatataaaa
    19381 aaggtgaaat atttttattt aaattttcat cataatcaaa actaacttgc ctaaaatcaa
    19441 tctttgcggt tttaagcaag ttagctcttg aaatggaact tgaagcaaga attaacatta
    19501 aagtgctttt tctatcgttt ctaagctttg ttttaaagct tcattgattt tgcttaaatc
    19561 ttttccacct gcagtagcaa aatcatctct tccgccacca tttccaccta aaatttgcgc
    19621 cgcttcttta accaaagctc ctgcttttaa aggcacatct ttaacgccag ctgctaaagt
    19681 gattttttca tcttttactt ggataagtaa aatcaccgct ttagcaaatt tgtttttaaa
    19741 atcatcaatc atagctttaa tatcgccatt atctatacgt tttacgcaaa tttcaacacc
    19801 ttggatattt ttagaatcaa gctcggtttt acttgaattt ttaagctcat tttttaaact
    19861 taaaatttca tttttaagct ttttaatccc gcttaaaata tcattatttt taagttcatc
    19921 ttttacttta gaaagttctt cgagttgatt ttttacaaat tctaaagccg ctttagaaac
    19981 cacagcttca atacgtctaa ctccagcact cacaccactt tctttaacta tgtaaaaact
    20041 tcctatttga gcagtatttt taacatgagt tcccccgcaa agttctttgc tttcacctag
    20101 agttaaaaca cgcacattgc cttggtattt ttcattaaac aatgctatag caccgctttt
    20161 tttagcttct tctaaaggca tattttctaa gatagcttcg cttgagttta taatcatttt
    20221 attgactctt ttttcaatgc tttctagctc ttctttgttt aaagctttat gatgagtaaa
    20281 atcaaatctt agtttattgc tttcaaccaa agatcctgct tggcttacat gagaacctaa
    20341 aatttctctt aaagcatgat gtaaaagatg agtggctgag tggtggcgtg cgatttgctc
    20401 tcttttttct gtatcgattc ttgcatgaac tatatcgtta acttttagtt cttcgcctgc
    20461 ttttataaag ctaagattga gattaaaaaa cttttgcgta tctaaaactt cacgcttagc
    20521 tataaatcca ctatcagcac tttgcccccc acttgttgca taaaaaggtg tgttttcaag
    20581 catcacccaa cccgcatctt taagggtgga aacttcttta aaatcttcat ctaaaagggc
    20641 taaaatttta ctttcgcatt ctgctttttc ataacctacg aaatgatttt ctccaaattt
    20701 ttcaagtaag tttttaaaat ctccgcttgc agttttatct ccacttcctt tccaagaagc
    20761 cttagcgcgt gctttttgct cattcatgaa aagttcaaat ttttcttcat caactttaag
    20821 atttttttct cttagcatat cagccgttaa atcaagcgga aaaccataag tatcataaag
    20881 cttaaaggct acttctccgc taaaaatttc tttagtgttt ttaagctctt cattaaaaat
    20941 ttcaatccca ttttctatag tgcttaaaaa tctttcttct tcaaggcgaa tttgttcttt
    21001 tataaagtct tttttctcat taagataggt ataatgtccg cccattaaat cgcacacaac
    21061 atcaactagt ttatacataa aagcttgttt aaaacctagc aaatatccat gccttaaagc
    21121 acgacgcaaa atacgacgca aaacataacc cctaccttct ttatcaaaac ttaccccttg
    21181 tgcaagtaaa aatacacttg atcttatatg atcagctatg actctaaaac ttgctccact
    21241 ttcataaaca taagttttgt tacaaagttt tgaaatttca ttgatgattg gcataaaaag
    21301 cgagctatca aaattgctaa atttaccttc tttaattgct gttactcttt caagccccat
    21361 tcctgtatca atacttggct ttggcagtgg gctaagcact ccatcagcac ttctttcata
    21421 ttgcataaaa acaagattcc agatttctaa aaatctatct ccatctccgc ccatataatc
    21481 ttcgcttgag ttaaaatgct cttgtccttg gtcataaaaa atctcactgc aaggaccaca
    21541 aggaccagta tcgcccattt gccagaagtt atctttatca ccaaatttgt aaattctttc
    21601 tttttgaatg tgtttttgcc atagattaaa agcttcatca tcgttttcat gcacagttac
    21661 ataaagtcta tctttaggta gttttaaaac ttcagttaca aattcccaag cataagctat
    21721 ggcttgttct ttaaaataat ctccaaaact aaaattccca agcatttcaa aaaaagtatg
    21781 atggcgtgcg gtatatccta cattatctaa gtcattgtgc tttccacccg ctcttataca
    21841 agtttgacag cttgttttgc gtggagggtt tgggcgtgga atttctcctg taaatatact
    21901 tttaaaaggc accatacccg cattggtaaa aagtaaagtt gcatcatcag gaactaaagg
    21961 acttgacggg gttatctcat gtccttttga tgcaaaaaaa tccaaataag cttttctgat
    22021 atccatgaat tttcctaaag aaatttttat aaaaacatat cataccaaaa ttactttaaa
    22081 ttaagtaaaa ctaaaataca ataaacattt ttatttaatt ttatttctct aaggtttttt
    22141 atgaatttta tcaatcttca agcccaatat ctcgcataca aagatgaaat caatgctgaa
    22201 attgaaagcg ttttatcaag ctcttctttc ataggcggtg caaagcttaa cgaatttgag
    22261 caaaatttag ctcatttctt aggtgttaaa cacgctatag gttgctcaag tggaactagt
    22321 gctttatacc ttgccttaag agtcttagat attggtaaag atgatgaagt tatagtgcct
    22381 agttttactt tcatagcaac agctgaagtt gtggccttgg taggtgcaaa acctgttttt
    22441 gcagatataa atttatcaaa ttacaatctt gattttaaag cagtgcaaaa agcaataact
    22501 tcaaaaacta aagctgttat agcagtgagt atgtttggac aaatgagtga tttaagggct
    22561 ttagaagaaa ttttaaaaga taaaaatatc actttgatcg aagatggtgc acaaagtttt
    22621 ggcgcaagtt tcaaaggaga aaaatcctgc tctatagcta aaatttcatg cacaagcttt
    22681 tttccttcga agcctttggg agcttatggc gatggcgggg ctattttttg ccatgatgat
    22741 gaaattgcta aaaaaataag aattttactc aatcacggac aaactcagcg ttataaacat
    22801 gaatttatag gtataaatgg acgccttgac accttacaag cagcgatttt aaatgttaag
    22861 ttaaaatacc tagaaaaaga attagacaaa agacaaaaat tagcacaaat ttataatgca
    22921 aatttaaaaa actgtcaaat tccacaaatt aatccaaatg cttttagcgc ttatgcacaa
    22981 tacagtgttt tagttgaaga tagagctagt gtattgcgaa aatttgaaaa agctaatata
    23041 ccttatgcta tacactatcc aacccctttg cataaacaac cttgctttag tgagttttca
    23101 aatttagaac ttaaaaattc agaatacgca agcgaacaca tcttatcttt gcctttttca
    23161 ccttttttaa gtgaagaaga gcaagagcaa gttatttgta tttttaaaga ttaattccat
    23221 gaaaataggt atcataggtc ttggaaaaat ggggcaaaac cacttaaatg aacttagtaa
    23281 aaattctcat tttaaactta atgcactttt tgacctttgc aaaaatccaa acctaaatat
    23341 ttttgatgat attttttatg atgatttgga taaattttta aatcaaaata atgatattat
    23401 catcatagca acacctacaa attcacattt aacaatagca aaaaaagttt ttaaacaatg
    23461 caaatgcgtt ttaatcgaaa agcctttagc tctaaattta aaagaaatag acgaaatttc
    23521 aaatttagct aaagaataca gcataaaagt aggtgtaggt ttttgtgaaa gatttaatcc
    23581 tgcggtttta gccctaaaaa aagagcttga aaatgaagaa attatcagca ttaacataca
    23641 aagattttca ccctacccac aaagaatcag cgatgtaggg attttgcaag atttggctgt
    23701 gcatgatctt gatttgcttt gttttttaag caaacaagaa ataacaaaaa ccaatttgct
    23761 taaaaaatac acccaagatc aaacaagaga aagtgaaagc attattctat gtgggcttga
    23821 aaaatgtatt gctagcatac atcaaagttg gaatagcaca caaaaactaa gaaaaattca
    23881 tcttattact aaaaatcatt tttatgaagc caatttaaat gacttttctt tattaaaaga
    23941 tggaaatttt atagaactta ctcaacaaag tccacttttt tcagaacacg aagctttgtt
    24001 aaaacttatc gataatcaac ccaatcattt agccagcacg agcgatgctt acaaagttca
    24061 agaaatttta gaaaggtttg cgtgaaatta gttttatttt taaatatggg cggagctacg
    24121 aatttacaag attgtgaagt ttttttaaaa aatatgttta atgatcctta tattttagga
    24181 atcaaaaatc gatttttaag aaaatttgta gcatggatca taacaaaggc tcgcgttaaa
    24241 gccatgcaag aaaactataa aaaaatgggc ggaaaatccc ctttaaacga acttactcaa
    24301 agcctgtgtg acaagcttaa tttaaaacaa gatgaattta aatttgattt tgtaaatctt
    24361 tatgttcctc cttttgccac agaaattttg caaaaataca ctttaaatgc aagtgatgaa
    24421 atcattcttt ttccacttta tccgcaccat tcttgcacca cagtaacttc atctttagaa
    24481 gttctgcaaa atgaaatttc aaagcaaaaa attcaagcaa aagtaaaaac tatagatatt
    24541 ttttacaaaa atgagcttta taacgagatg atagtttcgc acattttggc taaaaaaagt
    24601 aaatttgatg ccaaaatttt gattttttca gcgcattctt taccacaaag cattattgac
    24661 aaaggtgatt tatatgaaaa gcatgtaaat gatcatgtag aaattttaaa agaaaagcta
    24721 aaagatcatt ttgatgaatt tattttagct tatcagtcta aactaggccc tgtaaaatgg
    24781 cttgaaccaa atacaagcga tgttttggca aatttaaacg ataaagctct gatttaccct
    24841 atttcttttt gcattgattg ttctgaaacg atttttgaac taggtatgga gtataaacat
    24901 ttatcaaaat acaattatga tttgataagt tgccctaatg atagtgatga atttatggaa
    24961 tttattttaa agtatttatc tgatcttaac taagaatgaa tttgagaacc ttgtctatca
    25021 tttttttaaa cttttttggt aaaaatttag ccgactaaac caaagtataa gctttttctc
    25081 cgtgcaaact cacatctaag cctttttgtt ctacttcttt tttcactctt aagtctgtaa
    25141 aacaagaaat gatcttaaaa aataataaag cttatgagag ctaaaaaaat catacaaatc
    25201 ataatagtaa gaatttgctc ttttaaaagc tctaaacttc cactgataaa aaatccctcc
    25261 gccaagtgca tttttggtaa tcacattagg atttgcttta acacttgcaa aaagccctgt
    25321 agcgattcct tcacaaacac ctccgattcc gtgcaaagaa aaaacatcta aagaatcatc
    25381 ctatttgagt ttgtatttaa taaaactcaa actaaaataa caaaatgcag aagacaaagc
    25441 cactataaca agaaaagcat aattatctac ataaccgcaa gctggagtaa tccctacaag
    25501 cccactaagc ccacctaaaa tagtcggttt ttatagatga gccctcaagc actacccaag
    25561 ataaaaagcc acaagctgct gatataatac ttactataaa agcattgata gcaatatcat
    25621 tcatttcgcc agcacttcca gcattaaaac ccagccatcc tataaaaagc aaaatcacac
    25681 ctaagaaagc ataagaaata gaatgcgcgt ttttatcctc atcatcactt tttctagcac
    25741 ccactatcaa agctcctaca agtccagcaa ccccagagct aatatacaca acaccacccc
    25801 cagcaaaatc aaggctttct cttttaagta aaaacccttc gctactccaa atcatatgcg
    25861 ctaacacatc ataaactaaa gtactccaaa aaagtaaaaa tatcaccaaa acacccagtt
    25921 taattcttcc aaccaaagag cctgttatga tggcagatgc aataagtgca aacatcattt
    25981 gaaaaatcat aaaaagaata tttgaaacac ctgaagcatt atatccgcta ataccctcta
    26041 agagaaaatt ctcgaaattt cctacaagcc caagtccttc atctttgcca aaagaaaagc
    26101 taaatccaag cactacccat tgtaaagtaa tgacaccaaa agcaataaag caattcatta
    26161 tggtattgag agtattttta cttcttacca tacccgaata aacattgcca aagttggagt
    26221 tataagcaaa actagtaaag tacacaacac aataaaactt gaatttatcg tattcattta
    26281 cttacccttt cttacaaaat atacttgcga gataatta
//
LOCUS       DAPIVO010000017        24554 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.017, whole genome shotgun sequence.
ACCESSION   DAPIVO010000017 DAPIVO010000000
VERSION     DAPIVO010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24554
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.017"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..359)
                     /locus_tag="RJ239_000674"
     CDS             complement(<1..359)
                     /locus_tag="RJ239_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HDV7330807.1"
                     /translation="MKKIIILTFFVVFAFGDVNRTIINNINEKINTLNTVISASIWNI
                     RYENFIKYQDINDELIILNLNLKKTSDIHQQEELKRKIANLEEQLNLLKEYKDLNFAQ
                     SLSAPDNIETLSKLTNP"
     gene            complement(356..1411)
                     /locus_tag="RJ239_000675"
     CDS             complement(356..1411)
                     /locus_tag="RJ239_000675"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HDV7330808.1"
                     /translation="MQVEVKLKENAYKVYIDELEELEFDSKVFILSNPKISGLHLKTL
                     LSKIKAKEIFIATVKDGEEYKNLSTMEEILNQMFNSKLDRKSVLISFGGGVISDMGGF
                     AASIYQRGIDFINIPTTLLACVDAAVGGKTGVNNNFGKNLIGTFYQPKAVYCESFFLK
                     TLSSRELAAGMAEFIKMAAMFDYSILDFIEKIDEKSFLNATCENEIFTQIIAKSIELK
                     SRVVEQDEKESRLRMLLNYGHTFAHVIENFTDYKLYLHGEAVAIGMVMANQLALNLGL
                     LDKMQSQRIKDILLKFGLPISYKINNVDEFYEAFFMDKKSSNKKINFVLASPLGKGLI
                     KGDISKEDIIATLREFQ"
     gene            complement(1457..2857)
                     /locus_tag="RJ239_000676"
     CDS             complement(1457..2857)
                     /locus_tag="RJ239_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COG3400 family protein"
                     /protein_id="HDV7330809.1"
                     /translation="MNNILIIIDGILAKHFLERLCFEKGLGYFFTVVCQNSEKNNLNI
                     SSEYIDLHYFDPTSTARLENIMSKDFKQAFIYMQDEFETKKSYEALRSLNPNLEIEIM
                     DFWGLSVNDTHANLADARMTLSRRFMDFLPDIALTAQYIGLGVGEIMEVKIPAGSIFA
                     YRHISSIQQKRWRIVLIYRNSKIYFVKPSFVLEPNDSILIVGDPVVLQSIFHNIRGKA
                     GQFPMPFGSNVFALIDMKNMNQNMQERVLDTTLKLTQKSNAKRFFIHVINPKLGVMYE
                     KLKKLSEDKEGVFFDYFNTDFKQISMWLQNNDIGLVVTDIKNFEKEKQAFFDLKIPIM
                     KVGEASFDELKEAIILSADESELENNANVITDLSKQLDFGVILYYYNPNSQNTTDMEE
                     YFRSLSKLYDKNIQIINKNDENPLLNLQYREDLLQFVSFQKELLNRDFARNLSTNLNR
                     HYYKMRQNYQLFIPVE"
     gene            2887..4008
                     /gene="tgt"
                     /locus_tag="RJ239_000677"
     CDS             2887..4008
                     /gene="tgt"
                     /locus_tag="RJ239_000677"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HDV7330810.1"
                     /translation="MEFKLKHKDGMARVCEITTAHSTFLTPVFMPVGTVGAVKSLDAN
                     DMKNELDAKIILANTYHMYLRPTSKVVKDFGGLHGFTKFDRSFLTDSGGFQAFSLSKN
                     SKHFNEGIEFKSHIDGSRHLFTPKSVLDTQYDFNSDIMMILDDLVALPATKERVKISV
                     DRTILWAKEAITYHKNMQNKGIGIGQNIFGIIQGGTDYEERKRCALSLNEMPFDGLAI
                     GGLSVGEENALMYETVQNLNPYLDENRPRYLMGVGTPEDLVENVERGVDMFDCVMPTR
                     NARNGTFFTSFGKFNIKKAEFINDHEVIDSTCSCYTCRNFSRGYLNHLFKAKELTFFR
                     LASLHNLHYYLELARKMREAILNNSFTQFKRNFYHLRGK"
     gene            4010..4777
                     /locus_tag="RJ239_000678"
     CDS             4010..4777
                     /locus_tag="RJ239_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HDV7330811.1"
                     /translation="MLELHENLKKILQAKNLETFYSEIYGQKIFVYVGLNLETWLFND
                     EKIYKLQDGEFKLSSIEEFSNFIKSILEDFKVQNTHFQNLLEHKEGIILKGGFVKNFY
                     KKSFVLRQKINKNLKQINLLSEAFNLLLSEQAQYKKHLKILNLSISILSKNTKEHLAR
                     IDTLYTLTNAIKNEKMNKSIYLLSILSSIFLPLNLIVGFFGMNTNNLFFKDSPYGTLY
                     IFSLICCILIVGFIFYYSKKTKEFDLDEGKKAKKQTK"
     gene            4830..4906
                     /locus_tag="RJ239_000679"
     tRNA            4830..4906
                     /locus_tag="RJ239_000679"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4864..4866,aa:Arg,seq:gcg)
     gene            complement(4909..5358)
                     /locus_tag="RJ239_000680"
     CDS             complement(4909..5358)
                     /locus_tag="RJ239_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330812.1"
                     /translation="MVIFCAALALLLFLGVIAYLITSDGKKTIKKQKTSQKQHVAEKT
                     KKFDTDLDKMIIAASDVKLTDIELKELAKLYVQTHKLGSKTSKELDEAAKKKLEFVSA
                     LAANINASAQTVSYLNKELKKIYGSYKKEIDAYEHMGLAKRKIKEDK"
     gene            complement(5374..8619)
                     /gene="ccsA"
                     /locus_tag="RJ239_000681"
     CDS             complement(5374..8619)
                     /gene="ccsA"
                     /locus_tag="RJ239_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HDV7330813.1"
                     /translation="MKNIIKSIGDLRVSVVLFLLFALFCALATFIESAYGTPTAWAMV
                     YDTFWFEYIQLLLGINLLCGMFRYKMFGLKKLPLMIFHISFLFILVGSAMTRYAGFEG
                     ILPIREHTQNSLIESSKTSLRISAIKDGERYSAVNDRYIGNLPFANSFKLKLNLGDDQ
                     AVLKYKDLILNAHYTYKENNNSDPLLVLMLSQKGSQGVDVKFEKGEVKNIEGVNFAFM
                     NDNVKAPFVKIDENLTLSSSENLHFLSMLDGQNLDLKIGEKANAKERRLYEINDISFV
                     VKAASLHAQEALEGSNRPQDESFWLWFKSAWLEVGRTMLISTFGEPQNWKNSLLLHFK
                     DFALSNENKNLELTGSNALKLELSYKNESKEFYIFEYNKPIMIELADQKFFISWALSY
                     EQLPFDIYLRDFVLDRYPGSMSPASYASEITVKNNNENFDYRIFMNNVLDYDGYRFYQ
                     SSYDQDEKGTVLSVNKDPGKIPTYIGYFLLCLGMFMNFLNPHSRFRTLARLINKDTLK
                     HTSVIIFILLLSFGSEKTFAQDLNSTLPVVNTNHAKALATLIVQKSADGRMVPFDTLS
                     REILEKIHQSDSYKGQNSNAVMLSMLVDVDKWQLEPFILMPQNQAVRDAIANILEIPS
                     AKYIAYKDFFDENNRYKLQKYVENANRKNPNARGVFDKEIIKLDERANVVNLVFSGEL
                     FKFIPVQNNPNNVWLAPFSAVTTLKGDEGHIVLALIQNYFSAVENAFKDGNWIRADEG
                     LKFIKEYQEKIGYKVMPSKTKVEMEIFSNKAEIFVKLAPVYLIAGFLLLILVFSKMVV
                     PNLKISFIFKVVYVLNVLAFVIHTVGLGLRAYLSGHAPWSNGYESMVYIAWALSLSGI
                     FFSRKSPIALSLTSILSGVVLMVAHLSEMNPQITNLVPVLNSYWLSIHVSVITASYGF
                     LGLCALLGIFTLFLMCFLKKDGKYNLNILRNITEATRINEMAMIFGLCLLTVGNFLGA
                     IWANESWGRYWSWDSKETWALVSILVYAAILHLRMIPKYCNQFVFALWSMFAYWVIIM
                     TYFGVNYFLTGLHSYAAGEAAQIPNYVYWGFALMVVLAFFARRKRNFVGKL"
     gene            complement(8637..9332)
                     /locus_tag="RJ239_000682"
     CDS             complement(8637..9332)
                     /locus_tag="RJ239_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7330814.1"
                     /translation="MLIVKDLHVYYGLIEAVKGIDFKVETGHIVSLIGSNGAGKTSTL
                     NALLNSVKRTGEVNFLGYDTKRHLTHTLVQKGIALVPEGRRVFINLSVEENLKIGAFN
                     NAENYEHLREQMYKLFPRLASKKHALAGTLSGGEAQMLAISRALMSEPKLLMLDEPSL
                     GLAPKIVGEVFDIIVRLKEEGITILLVEQNAYSALKISDYAYVLENGRIVMENEAKNL
                     IGDDEIRKKYLGL"
     gene            complement(9319..10089)
                     /locus_tag="RJ239_000683"
     CDS             complement(9319..10089)
                     /locus_tag="RJ239_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7330815.1"
                     /translation="MILELKQISKSFGSVKAINETSFKINEGEIFALIGPNGAGKTTL
                     FNIITGNYKPSSGSVEFLGERIDHLKPHKIVHLGIARTFQNIRLFSSMNVLENVLIGF
                     NKQMKYNIFEAFLHLGRFGKIEQVFKEKAYAILEELGIAEFAYEKATSLSYGQQRKVE
                     IARAMATQPRLLLLDEPAAGMNSSESDELAGLIFKLRKDYKISVLLIEHDMKFVNKLC
                     DRVLVLDYGKTIFEGKLCDAVNHKEVIAAYLGDFDANS"
     gene            complement(10086..11138)
                     /locus_tag="RJ239_000684"
     CDS             complement(10086..11138)
                     /locus_tag="RJ239_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HDV7330816.1"
                     /translation="MMVRIKVSHLIFLIASIIFIFISPYIFGDYGLNIVNQIAIFIIL
                     AVSYNLINGVTGQFSLEPNGFVAIGAYAAALVLLSADAKNDQFFLDGPSSFILAIHSN
                     SFILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGIIIKIAAINFPSITNGSR
                     GLVDIPQFSTIYWTGGIAIVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIK
                     TLAFSTSAFLEGVGGGLLACLLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAI
                     LVIGGSEWLRFLDELNIKIDSLNLDIQSTPGLRMVVFSIVLILVMLFARKGIMGYYEL
                     SDVIRGIKKRFKRSKK"
     gene            complement(11138..12034)
                     /locus_tag="RJ239_000685"
     CDS             complement(11138..12034)
                     /locus_tag="RJ239_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HDV7330817.1"
                     /translation="MDSTLFLQQLVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDI
                     MMVGAYAALFCMTNLNVPFLGALSLAMIFAACVGIATDRIAYKPLRQAPRISLLITAI
                     GISFFLQNLFNMLFTSTPRTFTPPSYFEESVNFGGVITTYGSLMVPALTFVILIAVLW
                     ILYKSKYGIAIRALAFDIQTVNLMGIDANRIIAIVFALGSALAAVGGVFWAANYYSVE
                     PTMGTLIGLKAFAAAVLGGIGSVVGAVLGGLIIGFTEVVVVAFFPDLSGFKDAFAFIF
                     LVFILLFRPTGILGINFEKSRF"
     gene            complement(12053..13162)
                     /locus_tag="RJ239_000686"
     CDS             complement(12053..13162)
                     /locus_tag="RJ239_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDV7330818.1"
                     /translation="MKKSLILASILSLSLSAAEVKIGVVLPLSGATAAYGQSALEGIK
                     LANSMQSALSNGDKVSLAIIDTKGDKLESSSGANRLVSQDKVIGLIGEMVTANTLQVM
                     RVAEDNKIPLIAPAATGDRLLDKKIYSSRVCFMDSFQGSSLAKYVFSKLNYKSAVIVV
                     DQSTDYSLGLAKAFEKQYKSNGGQILRILRVNSGDKDFRAIVAQVKSLNPEFIFLPLY
                     YSEASLFARQSKLAGLNIPMGSADGVADQTFISLAGDASEGYIFTDSFDANNPTTKLS
                     KEFISVYEKAKGTKEVPNFSAMGADAYFVMLNAMNACVENLTSKCVNEKIHQTKNYQG
                     VSGVISIDQTGNATRSVVVKEIKNQKQNYKDIINP"
     gene            complement(13184..14299)
                     /locus_tag="RJ239_000687"
     CDS             complement(13184..14299)
                     /locus_tag="RJ239_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDV7330819.1"
                     /translation="MKKLTLTLSVLTMVNCLYAKDINIGVVLPLTGTVAAYGQDVFNG
                     IELANKLQPKLSNGDVIKLITIDTKGDKLETSNGVNRLIATDKVLGIIGEATTPNTIQ
                     AISIAEEKKIPLIAPVASGDKLLDKKKYASRVCFKDSFQGDKFATYVSKDLGLKNAVI
                     IIDQSNVYSLGLARAFENSFKNNGGKIIKKLVINSGDKDFRAVVSQLKSLNPDFVYMP
                     IYHPEAALIARQARQIGFDKLLVAGDGVNNQTFIDLGGSAVNGVIFTDSFDYNSPSTQ
                     LGKDFVAAYEKVKGTKELPAFSAMGADAYFVMLNAMNACVDNLSSECINSKIHQTKDF
                     QAVGGVISIDESGNAIRSVVIKEIQNQKQNYKTIINP"
     gene            complement(14330..14764)
                     /locus_tag="RJ239_000688"
     CDS             complement(14330..14764)
                     /locus_tag="RJ239_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDV7330820.1"
                     /translation="MIARWLFISSIFVVALFGINLKSFFTYTFDANKQYDMEKAKALY
                     FQNKCNTCHGDNAEKSVIGSRILKDMSPEDIKGALIGYTLDSSSSTTASQMAFYARNL
                     SHEDIDNIIAYIKGGNFALDLQVKDLLEEEPAQKTKHNIFLK"
     gene            complement(14773..14964)
                     /locus_tag="RJ239_000689"
     CDS             complement(14773..14964)
                     /locus_tag="RJ239_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mini-MOMP protein"
                     /protein_id="HDV7330821.1"
                     /translation="MKKIFLIGMILNHFVFAAPLDEVFKDIEVSGTVRYRYDIKKEKK
                     YNKKTHRYQNKTQTEITIK"
     gene            complement(15017..15523)
                     /locus_tag="RJ239_000690"
     CDS             complement(15017..15523)
                     /locus_tag="RJ239_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqhA family protein"
                     /protein_id="HDV7330822.1"
                     /translation="MLEKIFESLLVRSRIVTILPVIFGLIGAFVLFFIASYDVLKVIF
                     YTYNYFFDAGSNVDLHEDVVALIIGAVDLYLMALVLFIFSFGVYELFISEIEEFKQTK
                     QSKVLEVHSLDQLKDKLAKVIIMVLVVNFFQRVLQMKFATPVDMAFLAGSILALCVGL
                     YFLHKGGH"
     gene            complement(15532..16563)
                     /locus_tag="RJ239_000691"
     CDS             complement(15532..16563)
                     /locus_tag="RJ239_000691"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HDV7330823.1"
                     /translation="MSKKQKIAIVGATGAVGEELLNVLDELDFPVESILPLASAKSVG
                     SEVEFKGKAYKVKELTENVFKENPIDIAFFSAGGSVSEKYAKFAVESGAVVIDNTSHF
                     RMEKDVPLVVPECNPEDIKDWKKTGIIANPNCSTIQMVQVLKPLNDAFNLKRVDVSTY
                     QAASGAGKEGMQELVEAMQSFFAFKLDEFEPQTFPYTLALNLIPQIDVFMDNDYTKEE
                     LKMVNETQKILHKNLEVSATCVRVPVLRSHSEAITMHFEKEIDVKKAKEILKKAPSVI
                     VIDDPKNKKYPMPLMTSDTNETYVGRIRADVYDKKILHLWCVADQIRVGAATNAVRIA
                     QKWLELKNK"
     gene            complement(16563..17864)
                     /gene="flgR"
                     /locus_tag="RJ239_000692"
     CDS             complement(16563..17864)
                     /gene="flgR"
                     /locus_tag="RJ239_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fla regulon two-component system response
                     regulator"
                     /protein_id="HDV7330824.1"
                     /translation="MNLVIVEDDINMRKSLEIALAEYEEFNIKSYKSATEALKKIDDN
                     TDLIITDINMPGIDGIEFVKACENKYDFIIMTGNATLSRAIEAVRLGVKDFLTKPFDV
                     DTLVEAIKRAKIIREKTADKKSKKNEKKEENKDFFSTSPNLEKTLNLSQKAAKTDASV
                     MFFGESGVGKEVFSRYIHTHSKRSNKPFIAINMAAIPANLIESELFGFEKGAFTDANA
                     TKIGLFEMANEGTLFLDEIGEMPYEIQAKLLRALQEKEITRLGSTKSIKIDVRIISAT
                     NANLDEKIKNGEFRSDLYYRLNTVPINIPPLRERKEEILGIAQKVLEDTCKEYDFKEK
                     QLSQEAKNALLEYDFPGNIRELISVVQRACILSENDEISSEDLFLEARSIKKDVKNLE
                     KELICEVLLSVDYDKDQASQILGMDIKILNEKIKKYQIKDK"
     gene            complement(17921..18370)
                     /gene="flgQ"
                     /locus_tag="RJ239_000693"
     CDS             complement(17921..18370)
                     /gene="flgQ"
                     /locus_tag="RJ239_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FlgQ"
                     /protein_id="HDV7330825.1"
                     /translation="MERIVCLLIFLSFKLFAQDEFIFWAELSSKNFILFHQNQNLSLA
                     MTQSENVEEQWVCEISYSDQDLKVLPRTSLGLIDDNMPKTIKFNFLNSHKDELSDCFI
                     GARISVKDIVNTDLLRAQSETYVKILPLRFTVEFGEQNAIIYYLKKK"
     gene            complement(18346..18861)
                     /gene="flgP"
                     /locus_tag="RJ239_000694"
     CDS             complement(18346..18861)
                     /gene="flgP"
                     /locus_tag="RJ239_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly lipoprotein FlgP"
                     /protein_id="HDV7330826.1"
                     /translation="MKKIYFMLAIAGIFAGCVPSANSATKNSSANSTAPSQDVIVQKV
                     DKDDVRDIIREEKMLAPDASETELSFTAVGEGIAPMNTVSTAQALALAKRAAITDAYR
                     QLASKLYGVKVNGKDTVKDAMLRSSTITAQVNGLIKNASIIDENFNQGLYRVNLELKI
                     DADKWKELFAY"
     gene            complement(18925..21516)
                     /gene="gyrA"
                     /locus_tag="RJ239_000695"
     CDS             complement(18925..21516)
                     /gene="gyrA"
                     /locus_tag="RJ239_000695"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit A"
                     /protein_id="HDV7330827.1"
                     /translation="MENIFSKDSDIELVDIENSIKSSYLDYSMSVIIGRALPDARDGL
                     KPVHRRILYAMQNDEAKSRTDFVKSARIVGAVIGRYHPHGDTAVYDALVRMAQDFSMR
                     YPSITGQGNFGSIDGDSAAAMRYTEAKMSKLSHELLKDIDKDTVDFVPNYDGSESEPD
                     VLPSRVPNLLLNGSSGIAVGMATNIPPHSLNELIDGLLYLLDNKDASLEEIMQFIKGP
                     DFPTGGIIYGKKGIIEAYRTGRGRVKVRAKTHIEKKTNKDVIVIDELPYQTNKARLIE
                     QIAELVKERQIEGISEVRDESNKEGIRVVIELKREAMSEIVLNNLFKSTTMESTFGVI
                     MLAIHNKEPKIFSLLELLNLFLTHRKTVIIRRTIFELQKARARAHILEGLKIALDNID
                     EVIALIKNSSDNNTARDSLVAKFGLSELQANAILDMKLGRLTGLEREKIENELAELMK
                     EIARLEEILKSETLLENLIRDELKEIRSKFDVPRITQIEDDYDDIDIEDLIPNENMVV
                     TITHRGYIKRVPSKQYEKQKRGGKGKLAVTTYDDDFIESFFTANTHDTLMFVTDRGQL
                     YWLKVYKIPEGSRTAKGKAVVNLINLQAEEKIMAIIPTTDFDESKSLCFFTKNGIVKR
                     TNLSEYQNIRSVGVRAINLDENDELVTAIIVQRDEDEIFATGGEENLENQEIENLDDE
                     NLENEESVSTQGKMLFAVTKKGMCIKFPLAKVREIGRVSRGVTAIKFKEKNDELVGAV
                     VIENDEQEILSISAKGIGKRTNAGEYRLQSRGGKGVICMKLTEKTKDLISVVIVDETM
                     DLMALTSSGKMIRVDMQSIRKAGRNTSGVIVVNVENDEVVSIAKCPKEENDEDELSDE
                     NFGLDLQ"
     gene            complement(21557..22132)
                     /locus_tag="RJ239_000696"
     CDS             complement(21557..22132)
                     /locus_tag="RJ239_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HDV7330828.1"
                     /translation="MRCINCGAFALLCFCELCELELSEFSLNVRKLDNNFKVYSFYKY
                     HEIQHLLHSKHYFYGYFVYKMLAKLSFAKFKDFFDPRMTINVIALDDKVEDMLYSHSA
                     ILARYLKTKFVKPVFNVLKAQNSVKYSGKSLEFRQKHKRNYKLLKTIHEPVILVDDIV
                     TTGSSLLEAKKVLEENKISVLFALVLADAKV"
     gene            complement(22129..22773)
                     /locus_tag="RJ239_000697"
     CDS             complement(22129..22773)
                     /locus_tag="RJ239_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330829.1"
                     /translation="MFKKFLIFIVPILFLSACATKQDTFAQVNQISKNSQCSSCESPG
                     GFEAKIKGLLYISDVGIQCCANKRTLDTGIALKKVYLHRFYDLKEGQKVLNAKGKKLF
                     VDVNFNAVFYTYLKQELEARGIVVLDNNDQNSPYVSKIDLEFISYGATQDAIGLHSKL
                     VGVLQVSDINKNKKFTIRTKQDVQGFDDLKETTFYTHLLIKQMANKAASLISEL"
     gene            complement(22850..>24554)
                     /gene="lepA"
                     /locus_tag="RJ239_000698"
     CDS             complement(22850..>24554)
                     /gene="lepA"
                     /locus_tag="RJ239_000698"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HDV7330830.1"
                     /translation="AISDRQMSSQVMDTMDIEKERGITIKAQSVRLNYKFNNENFVLN
                     LIDTPGHVDFSYEVSRSLASCEGALLVVDASQGVEAQTIANVYIALENNLEIIPVINK
                     IDLPNADVEKVKHEIEHIIGIDCKDAICVSAKTGVGIKELIETIITKIPAPKTDDEAP
                     TKALIYDSWFDNYLGALALVRIYEGSIAKNDEVLVMSTDKKHIVQDLFYPHPLSPIKT
                     QSLQSGEVGVVVLGLKTVGDVQVGDTITLVKNKAKEAIGGFEKAKAFVFAGLYPIETD
                     KFEDLRDALDKLKLNDSSITYEPETSLALGFGFRVGFLGLLHMEVIKERLEREFNLDL
                     IATAPTVTYEIYQTDGELIKIQNPSELPPVNKIDHIKEPYVKATIITPSEFLGNLITL
                     LNRKRGVQVKMDYITPERVLLEYDVPLNEIVMDFYDKLKSLTKGYASFDYEPIEFRVG
                     DLVKLDIKVAGENVDALSIIVPNEKAQSKGRELVSAMKEIVPRQLFEVAIQASIGNKI
                     IARETVKSMGKNVTAKCYGGDITRKRKLLEKQKEGKKRMKAIGKVNLPQEAFLSVLKI
                     D"
BASE COUNT         8538 a         4531 c         2968 g         8517 t
ORIGIN      
        1 aaaggattag taagcttaga taaagtttct atattatcag gggcactaag actttgtgca
       61 aaatttaaat ctttatattc tttaagcaag ttcaattgct cttctaaatt tgctatcttg
      121 cgtttaagtt cttcttgttg gtgaatatcg gaagtctttt ttaaattaag atttaaaatg
      181 attaattcat catttatatc ttgatatttt ataaaatttt cataacgtat attccaaata
      241 ctagcactga ttacagtatt taaagtatta attttctcat ttatattatt aataatagtc
      301 cgatttacat caccaaaagc aaaaacaaca aaaaaggtta aaataataat ttttttcatt
      361 ggaattctct taaagttgca attatatctt ctttagaaat atcacctttt atcaaaccct
      421 tacccaaagg actagcaaga acaaaattga tttttttatt agagcttttt ttatccatga
      481 aaaaagcttc ataaaattca tctacattgt tgattttata tgatattggc aaaccgaatt
      541 taagtaaaat atcttttatt ctttgacttt gcattttatc caaaagccct aaatttaaag
      601 ccaattgatt tgccataacc atacctatag ccaccgcttc tccgtgtaaa taaagcttat
      661 aatctgtaaa attttctata acatgagcaa aagtatgacc ataatttaaa agcattctaa
      721 gccttgattc tttttcatct tgttcaacaa cccttgattt aagctctatg ctttttgcta
      781 taatctgagt aaaaatttca ttctcacaag tagcatttaa gaaacttttt tcatcaattt
      841 tttctataaa atcaagtata ctataatcaa acattgctgc cattttaata aattcagcca
      901 tgcctgcagc aagttctcta gagctcaaag tctttaaaaa aaaactctca caatatacag
      961 ctttaggttg ataaaaagtg ccaataagat ttttaccaaa attattatta acacctgttt
     1021 ttccacctac tgctgcatca acacaagcta aaagtgtagt aggaatattt ataaaatcaa
     1081 tacctctttg ataaatacta gcagcaaatc cgcccatatc actaatcacg ccaccaccaa
     1141 aacttataag tacgcttttt ctatccaatt tagaattaaa catttggttt aaaatttctt
     1201 ccatggtgct taaattttta tattcttcac catctttcac agtggcaata aaaatttctt
     1261 ttgccttaat tttagaaagt aatgttttca aatgaagacc tgaaatctta ggatttgaaa
     1321 gtataaaaac cttactatca aattctaatt cttcaagttc atcaatataa accttataag
     1381 cattttcttt taacttaact tctacttgca ttgaactact ctttttgcat ttattttatc
     1441 acatttaatt aattatttat tctactggta tgaaaagttg gtaattttgt ctcattttgt
     1501 aataatgcct atttaaattt gtacttaaat ttctggcaaa atctctattt agtaattctt
     1561 tttgaaaact cacaaattgt aacaaatctt cgcgatattg caaatttaaa agagggtttt
     1621 catcattttt attaataatt tgtatatttt tatcataaag cttagataaa cttctaaaat
     1681 actcctccat atctgtagta ttttgagaat ttggattata ataatataaa ataactccaa
     1741 aatcaagctg tttacttaaa tcagtaatga catttgcatt gttttcaagt tcactctcat
     1801 cagcacttaa aataatcgct tctttaagct catcaaaaga agcttcaccc accttcataa
     1861 taggaatttt taaatcaaaa aaagcttgtt tttctttctc aaaatttttt atatcagtta
     1921 caactaatcc tatatcatta ttttgcaacc acatggaaat ttgtttaaaa tccgtgttga
     1981 aataatcaaa aaacacacct tctttatcct cagaaagttt ttttaatttt tcatacatta
     2041 cccctaattt aggattgata acatgtataa aaaatctttt tgcattgctt ttttgagtta
     2101 attttaaagt agtatcaagc actctttctt gcatattttg attcatattt ttcatatcaa
     2161 ttaaagcaaa aacattactt ccaaaaggca taggaaattg ccctgctttg cctcttatat
     2221 tatgaaaaat actttgtaaa acaacaggat ccccaacgat caaaatgcta tcatttggct
     2281 ctagaacaaa agatggtttt acaaaataaa ttttagaatt tctataaata aggactatgc
     2341 gccacctttt ttgttgtatt gaacttatgt gcctataagc aaaaatagac cctgctggaa
     2401 tttttacttc cataatctct ccaactccaa gtcctatata ctgagctgtt aaagcaatat
     2461 ctggtaaaaa atccataaat ctacggctta aagtcattct agcatcagct aaatttgcat
     2521 gagtatcatt aacacttaac ccccaaaaat ccattatttc tatttctaaa tttggattta
     2581 aagaacgcaa agcctcgtaa ctttttttag tttcaaattc atcttgcata taaataaaag
     2641 cctgtttaaa atccttactc ataatatttt caagacgcgc tgtgcttgta ggatcaaaat
     2701 aatgcaagtc aatatactcg ctagaaatat ttaagttatt tttttcacta ttttgacaca
     2761 ctactgtaaa aaagtaacct aagccttttt caaaacaaag cctttctaag aaatgctttg
     2821 ctaaaatacc atctattata attaaaatat tattcatttt aaactccaaa aaggaaatta
     2881 taacaaatgg aatttaaatt aaagcataaa gatggaatgg caagggtttg tgaaatcact
     2941 accgcacaca gcactttttt aacccctgtt tttatgcctg ttggcacagt aggagcggtt
     3001 aaaagtcttg atgctaatga tatgaaaaat gagcttgatg caaaaattat tttagcaaat
     3061 acctatcaca tgtacttgcg tccaacttcc aaagtagtaa aagattttgg aggtttacat
     3121 ggatttacga aatttgatag aagtttttta accgatagtg gtggttttca agctttttct
     3181 ttaagtaaaa attccaaaca ttttaatgaa ggcatagaat ttaaaagtca cattgatgga
     3241 agtcgtcatc tttttactcc aaaaagtgtt ttagatactc aatatgattt taattctgat
     3301 attatgatga ttttagatga tttagtagcc ctacccgcaa ccaaagaaag ggttaaaatt
     3361 tctgttgatc gcactatact ttgggcaaaa gaggctatta cttatcataa aaatatgcaa
     3421 aataaaggta taggtatagg gcaaaatatt tttggtatta tccaaggtgg tacagattat
     3481 gaagaaagaa agcgttgcgc tttaagttta aatgaaatgc catttgatgg tttagctata
     3541 ggtgggctta gcgtgggcga agaaaacgcc ttgatgtacg aaacagtcca aaacttaaac
     3601 ccttatctag atgaaaatcg tccaagatat ttaatgggcg taggaacgcc tgaagattta
     3661 gtagaaaatg ttgagcgagg agtagatatg tttgactgtg tgatgccaac tagaaatgca
     3721 agaaatggaa catttttcac aagttttgga aaatttaata tcaaaaaagc agaatttatc
     3781 aacgatcatg aagttataga ttctacttgc tcatgttata cttgtcgtaa tttttcaagg
     3841 ggttatttaa accatctttt taaagctaaa gaacttactt tttttcgttt ggcaagtctg
     3901 cacaatctac attattatct tgaacttgca agaaagatgc gtgaagcaat tttgaacaat
     3961 tcttttacgc aatttaaaag aaatttttat cacttaagag gcaaataaaa tgctagaact
     4021 acacgaaaat ctaaaaaaaa tcctacaagc aaagaattta gaaacttttt atagtgaaat
     4081 ttatggacaa aaaatttttg tttatgtggg attaaatttg gaaacttggc tttttaacga
     4141 tgaaaaaatt tataaacttc aagatggaga atttaagctt tctagcatag aagaattttc
     4201 aaattttatt aaatccattt tagaagattt taaagtacaa aatactcatt ttcaaaacct
     4261 tttagaacac aaagaaggta ttatcttaaa aggtggtttt gttaaaaatt tttacaaaaa
     4321 atcctttgtg ttaagacaaa aaatcaacaa aaatctaaag caaattaatc ttctaagcga
     4381 agctttcaat cttttgctta gtgaacaagc acaatataaa aaacatttaa aaattttaaa
     4441 tttatccatc agcatcttaa gtaaaaacac caaagaacat ctagcaagaa ttgatactct
     4501 ttatacatta acaaatgcaa ttaaaaatga aaaaatgaat aaaagtattt atcttttaag
     4561 tatactttct tctattttct tgcctttaaa tttgatcgta ggattttttg gaatgaatac
     4621 taataatctt tttttcaaag atagccctta tggtacactt tatatttttt ctttgatttg
     4681 ctgtattttg attgtaggtt ttatatttta ttattcaaaa aagactaaag aatttgattt
     4741 agatgaaggt aaaaaagcta aaaaacaaac aaaataagca aaattttgct tattttaaga
     4801 atatttatat ataattttaa cttatttttg cgctcatagc tcagctggat agagcatttg
     4861 attgcggttc aaaaggccag aggttcgaat cctcttgagc gcaccatatt atttatcttc
     4921 tttaattttt cttttagcta atcccatatg ctcgtaagca tcaatttctt ttttgtaaga
     4981 tccataaatt ttcttaagtt ctttatttaa gtaacttact gtttgtgcac ttgcattaat
     5041 atttgcagcc aaagcagaaa caaattctag tttctttttt gctgcttcat ctaattcttt
     5101 agaagttttt gaaccaagtt tatgtgtctg cacataaagt ttggcaagtt cttttaattc
     5161 aatatccgtt agtttaacat cggaagcagc aattatcatt ttatctaagt ctgtatcaaa
     5221 ttttttagtc ttttcagcta catgctgctt ttggctagtt ttttgctttt taattgtttt
     5281 tttgccatca cttgtaataa gataagcaat cacgcctaaa aacaataaaa gcgctaaagc
     5341 agcacaaaaa ataaccaaaa aaatatggtt catttaaagt ttgcccacaa aatttcgctt
     5401 ccttcttgca aaaaaagcta aaaccaccat caatgcaaat ccccaataaa cataattagg
     5461 aatttgagcc gcttcgcctg cagcgtaaga atgaagtcct gttaaaaagt aatttactcc
     5521 aaaataagtc ataataataa cccaataagc aaacatactc cataaagcaa acacaaattg
     5581 attacaatat tttggaatca ttctaagatg caaaattgct gcataaacca aaatgctaac
     5641 taaagcccaa gtttccttag aatcccaact ccaatatctc ccccaacttt catttgccca
     5701 aattgctcct aaaaaatttc ctacagtaag caaacaaagt ccaaaaatca ttgccatttc
     5761 attaattctt gtagcctctg taatatttct caaaatatta agattatatt ttccatcttt
     5821 cttaagaaaa cacattaaga acaatgtaaa gataccaagt aaggcacaaa gtcctaaaaa
     5881 tccataacta gcagtaataa cagatacatg aatactaagc caataagaat taagcacagg
     5941 aacaagattt gtaatttgcg gattcatttc gcttaaatgc gcaaccatta atacaacacc
     6001 agataaaata gaagttaatg acaaggctat aggacttttt ctggagaaaa atatacccga
     6061 caaagacaat gcccaagcta tatacaccat actttcatag ccattactcc atggagcatg
     6121 acctgataaa taagcacgaa gtccaagacc tactgtatga attacaaaag ctaaaacatt
     6181 taaaacatat accactttaa atataaaaga gatttttaaa ttcggtacga ccattttaga
     6241 aaaaacaaga atcaagagta aaaaacccgc aattaaatat acaggagcga gtttaacgaa
     6301 aatttcagcc ttattagaaa aaatttccat ttcaaccttg gttttactag gcatgacttt
     6361 atatcctatt ttttcttgat attctttgat aaatttcaag ccttcatcag ctctaatcca
     6421 attaccatct ttaaaagcat tttccacggc actaaaataa ttctgtatta aagccaaaac
     6481 aatatgccct tcatccccct taagagtagt tacagcagaa aaaggtgcaa gccaaacatt
     6541 atttggatta ttttgaacag gaataaattt aaataattca ccactaaaaa ctaaatttac
     6601 aacattagct ctttcatcta gttttataat ttccttatca aaaactcctc ttgcatttgg
     6661 gtttttacga tttgcatttt caacatattt ttgaagttta tagcggttat tctcatcaaa
     6721 aaaatcttta taagcaatat atttagcact aggaatttct aaaatatttg caatagcatc
     6781 acgaactgct tgattttgtg gcattaaaat aaaaggttcc aattgccatt tatctacatc
     6841 aacgagcatg gaaagcataa cagcgttaga attttgaccc ttatagctat cactttgatg
     6901 aattttttct aaaatttctc ttgatagcgt atcaaaaggc accattcttc catctgctga
     6961 tttttgaact attaaagtgg caagagcttt agcatgatta gtatttacca caggtaaggt
     7021 cgaatttaaa tcttgagcaa aagtcttttc agaaccaaaa gataacaata aaataaaaat
     7081 aatcacactt gtatgtttta aagtgtcttt attaattaat cttgccaaag ttctaaatct
     7141 agaatgtgga tttaaaaaat tcataaacat tccaagacaa agcagaaaat aacctatata
     7201 agttggtatt ttgcccggat ctttatttac agataaaaca gtcccttttt catcttgatc
     7261 ataagaactt tgataaaatc tatagccatc ataatctaaa acattattca taaaaattct
     7321 ataatcaaaa ttttcattat tattttttac ggtaatttca cttgcataag aagctggaga
     7381 catagaacct ggataacgat ctaatacaaa atctcttaaa taaatatcaa aaggcaattg
     7441 ttcataagaa agcgcccaag aaataaagaa tttttgatct gcaagttcta tcataatagg
     7501 tttattatat tcaaaaatat aaaattcttt actttcattt ttatagctta attctaattt
     7561 taaagcatta gagccagtta attctaagtt tttattctca ttgcttaagg caaaatcttt
     7621 aaaatgcaat aataaagaat ttttccaatt ttgaggctcg ccaaaagtag aaatcaacat
     7681 agttctaccc acttctaacc aagcagattt aaaccataac caaaaacttt catcttgagg
     7741 tctattggaa ccttctaaag cttcttgcgc atgcaaagaa gcagctttaa ctacaaaact
     7801 aatatcatta atttcataaa gtcttctttc cttagcattt gccttttctc caattttaag
     7861 gtctaaattt tgtccatcta gcatgcttag aaaatgtaag ttttcacttg aacttaaagt
     7921 taaattttca tcaattttta caaaaggtgc tttaacatta tcattcataa aagcaaagtt
     7981 aaccccttct atattcttaa cttcaccttt ttcaaattta acatcaacac cttgagatcc
     8041 tttttgagaa agcatcaaaa ccaataaagg atcagaatta ttattttctt tataagtata
     8101 atgagcattt aagattaaat ctttatattt taatacagct tgatcatcac ctaaattaag
     8161 ttttagttta aaagaattag caaaaggcaa atttcctata taacgatcat taaccgcact
     8221 atagcgttct ccatctttta tagcagaaat acgcaaagaa gtcttagaac tttctataag
     8281 tgaattttga gtatgctctc taataggtaa aataccttca aaaccagcat atcttgtcat
     8341 tgcagaaccc actaaaataa ataaaaaaga aatatgaaaa atcattaaag gtaatttttt
     8401 aagcccaaac attttataac gaaacatccc gcatagtaaa ttaataccaa gtaaaagttg
     8461 tatatattca aaccaaaaag tatcataaac cattgcccaa gccgtagggg ttccataagc
     8521 actttcaata aaagttgcca aagcacaaaa aagcgcaaaa agcaaaaaca atacaaccga
     8581 aactcttaaa tcccctatgc tttttattat atttttcatt ctttttcctt taaattttaa
     8641 agccctaaat atttctttct aatctcatca tcacctatta aatttttagc ctcgttttcc
     8701 attacaatgc gaccattttc caaaacataa gcataatcac ttatttttaa tgcagaataa
     8761 gcattttgct ctaccaaaag aatagttata ccctcttctt ttaaacgcac aataatatca
     8821 aaaacttcac ccacaatctt tggagcaagt cccaaagaag gctcatccaa catcaaaagt
     8881 tttggttcac tcattaaagc ccttgaaatc gcaagcattt gcgcttcccc tccactcaat
     8941 gttccagcta aagcatgctt tttacttgca agtcttggaa aaagtttata catttgctct
     9001 cttaaatgct cataattttc agcattatta aaagcaccta tttttaaatt ttcctctacg
     9061 cttaaattaa taaaaacacg ccttccttca ggaactaaag ctataccttt ttgaactaaa
     9121 gtatgagtta aatgcctttt agtatcataa cctaagaaat taacctcacc agttctttta
     9181 actgagttta aaagcgcatt taaagttgaa gttttacctg ctccatttga acctataaga
     9241 gaaacaatat gacctgtttc cactttaaaa tcaatccctt taacagcttc aattaatcca
     9301 taataaacat gcaaatcttt aactattagc atcaaaatcc cctaaatacg cagcaattac
     9361 ttctttatga tttacagcat cgcaaagttt accttcaaaa attgtttttc cataatcaag
     9421 taccaatacg cgatcacaca atttatttac aaatttcata tcatgttcta taagcaaaac
     9481 gctaatttta taatcttttc gtaatttaaa aatgagccca gcaagttcat cactctcaga
     9541 gctattcatc ccagcggctg gctcatcaag caataataat cttggttgag tagccattgc
     9601 tcttgcaatc tcaacttttc tttgttgtcc ataactcaag ctagtagcct tttcataggc
     9661 aaattctgca ataccaagtt cttctaatat tgcataagcc ttctctttaa atacttgttc
     9721 tatttttcca aaacgcccta aatgcaaaaa ggcttcaaaa atattatatt tcatttgttt
     9781 attaaaacca ataagaacat tttcaagcac attcatgctt gaaaaaagcc taatattttg
     9841 aaatgttcta gctattccta aatgcacaat cttatgaggt tttaagtgat caattctttc
     9901 tcctagaaat tcaaccgaac ctgaactagg tttatagtta cctgttataa tattaaaaag
     9961 agttgttttg ccagccccat taggtccaat taaagcaaaa atttcaccct cattgatttt
    10021 aaaagaagtt tcattaatag ccttaacact accaaaactt tttgaaattt gttttaattc
    10081 caaaatcatt ttttgctcct tttaaaacgc tttttaatcc ctctaatcac atcactcaac
    10141 tcataataac ccattatgcc ttttcttgca aaaagcatta ctaaaatcag aacaatagaa
    10201 aaaacaacca ttctaagccc tggcgttgat tggatatcaa gatttaaaga atctattttt
    10261 atatttaact catctaaaaa tctaagccac tcacttccac caataaccaa tatcgcacct
    10321 ataatagcac ctgtagtaga accaagtcca cctaaaacaa taataatcaa aagctgaaaa
    10381 gtaagtaaaa aatcaaattg agttggagat acggtagtca acagacaagc taaaagtccg
    10441 ccacctacac cttctaaaaa tgctgaagtg ctaaaagcta aagtttttat ccaaaaagta
    10501 tttattccca tagcgcttgc agcatcttca tcatctctta tagccttcat tgcacgacca
    10561 tatttagaat aaactatatt taaaattaaa ataaccgcta caatagcaat accacctgtc
    10621 caatagatcg tggaaaattg tggaatatct accagccctc ttgagccatt agtaatagaa
    10681 ggaaaattaa tagcagctat tttaataatt attccaaagc ctaaagttac aatagccaaa
    10741 taatcccctc tcacgcgaaa tacagcaaaa gccaaaatca gggcaagtaa agatgaacaa
    10801 attccagcca caattaaagc tagaataaag gaatttgaat ggatagctaa aataaaagaa
    10861 ctaggaccat ctaaaaaaaa ctgatcattt tttgcatcag cacttaaaag aactaaagca
    10921 gccgcataag ctccaatcgc aacaaatcca ttgggttcta gtgaaaattg tccagttaca
    10981 ccattaataa gattgtaact cacagccaaa ataataaaaa tagcaatttg attaacaatg
    11041 tttaatccat aatccccaaa aatataagga gaaatgaaaa taaaaataat tgaagcaatt
    11101 aaaaagatta aatgtgaaac cttaattcta accatcatta aaacctactc ttttcaaaat
    11161 ttatacctaa aattcccgta ggcctaaata acaatataaa caccaaaaaa ataaaagcaa
    11221 atgcatcttt aaagcctgat aaatctggaa aaaaagccac aacaacaact tcagtaaatc
    11281 ctataataag tccacccaaa actgcaccta ctacagaacc tatacctcct aaaactgcag
    11341 cagcaaaagc ttttaaacct attaaagttc ccatagtagg ttcaacagag taataatttg
    11401 cagcccaaaa aacaccccca actgctgcca aagctgaacc tagggcaaaa actatagcaa
    11461 taatacgatt tgcatctata cccattaaat ttactgtttg tatatcaaat gccaaagcac
    11521 gaatagctat accatatttg cttttataca aaatccataa cactgctatt aaaataacaa
    11581 atgtaagagc aggaaccatt aaagaaccat aagttgttat cactccacca aaattaacac
    11641 tttcctcaaa ataacttggc ggtgtaaaag ttctaggtgt tgaagtaaaa agcatattaa
    11701 aaagattttg caagaaaaaa ctaataccga ttgctgtaat caacaatgaa attctaggag
    11761 cctgtcttaa aggtttataa gcgattctat ctgtagctat tccaacacaa gcagcaaaaa
    11821 tcattgctaa agacaaagct cctagaaaag gaacatttag attagtcatg caaaaaagag
    11881 ccgcataagc accaaccatc ataatatcgc cgtgagcaaa attaataagt cttaacacac
    11941 cataaaccat cgtatagcca acagcaataa gagcatacat actgcccaaa ctaagtccat
    12001 taacaagttg ttgtaaaaat aaagtagaat ccataatctt tctatttttc ctttaaggat
    12061 tgataatatc tttataattt tgcttctgat ttttaatttc tttaaccact acagaacgag
    12121 ttgcatttcc tgtttgatca atactgataa caccagaaac accttgataa tttttagttt
    12181 ggtgaatttt ttcattgaca cacttactag taagattttc aacgcaagca ttcatagcat
    12241 ttagcattac aaaatacgca tcagcaccca tagccgaaaa atttggaact tcttttgttc
    12301 ctttagcttt ttcataaaca ctgataaatt ctttgcttaa ttttgtagtt ggattattag
    12361 catcaaaact atctgtgaaa atataaccct cgcttgcatc tccagctaaa ctaataaaag
    12421 tttgatcagc aactccatct gcagaaccca taggaatatt taaacctgcg agttttgatt
    12481 gtcttgcaaa taaagaagct tcgctataat aaagcggtaa aaaaataaat tctggattta
    12541 aacttttaac ttgagctaca atagctctaa aatctttatc acctgaatta actcttaaaa
    12601 ttctaagaat ttgaccacca ttagacttgt actgtttttc aaaagctttt gctaaaccta
    12661 aggaatagtc agtgctttga tctactacaa taacagcact tttgtaatta agttttgaaa
    12721 aaacatattt tgctaaagat gaaccttgaa aactgtccat aaaacatact cgagaagaat
    12781 atattttttt atcaagcaat ctatcaccag ttgcagcagg agcgatcaat ggaattttat
    12841 tatcttctgc tacgcgcata acttgcaatg tattagcagt aaccatttcc cctataaggc
    12901 ctataacttt atcttgagaa actaaacgat ttgctccact cgaagattct aatttatcac
    12961 ctttagtatc aataatagca agagaaacct tatctccatt acttaaagct gattgcattg
    13021 aatttgcaag tttaatccct tctagtgcgc tttgtccata tgctgcagta gctccgctaa
    13081 gcggtaaaac aactcctatt ttgacttccg cagcacttaa acttaaactt agaatacttg
    13141 ctaaaattaa actttttttc attctctacc tttattttag taattatgga tttataattg
    13201 ttttataatt ttgtttttga ttttgaattt ctttaatcac aacagaacga atggcattac
    13261 cgctttcatc tatgctaatc acaccaccaa cagcttgaaa atctttagtt tgatgaattt
    13321 tgctattaat acattcgctg ctaagattat caacgcaagc attcatagca tttaacatta
    13381 caaaatacgc atcagccccc atagccgaaa atgctggaag ttcttttgtt cctttaactt
    13441 tctcataagc tgcaacaaaa tcttttccta attgtgtaga tggactgtta taatcaaaac
    13501 tatcagtgaa aattactcca ttaacagcac ttccgccaag atctataaaa gtttgattgt
    13561 taacaccatc tcctgctact aaaagtttat caaaaccaat ttgtcttgct tgtctcgcaa
    13621 ttaaagcagc ttcaggatga taaataggca tataaacaaa atcaggattt aaactcttaa
    13681 gttgagaaac cacagctcta aaatctttat ctcctgaatt aataacaagt ttttttataa
    13741 ttttcccacc attattctta aaagaatttt caaaagctct tgccaaacct aaagaataaa
    13801 cattgctttg atctatgatg ataacagcat ttttaagtcc taaatcctta gatacataag
    13861 tagcaaattt atctccttga aaactatctt taaaacaaac tctacttgca tatttctttt
    13921 tatctagcaa tttatctcca gatgccactg gagctattag gggaattttt ttctcttctg
    13981 ctatagaaat agcttgaatg gtatttggag ttgtagcttc accaataatc ccaaggactt
    14041 tatctgttgc tattaaacga ttaactccat ttgaagtttc aagcttatct ccttttgtat
    14101 ctattgtgat aagtttaata acatctccat ttgaaagttt tggctgtagc ttattagcca
    14161 gttcaattcc gttaaaaaca tcttgcccat aagctgccac agttccagtt aaaggtaaaa
    14221 ctactcctat attaatatcc ttagcatata agcaatttac catagttaaa acacttaaag
    14281 ttaaagttag ttttttcata gtattccttt taattatagt ttttacattt tattttagaa
    14341 atatattatg ttttgttttt tgcgcaggtt cttcttcaag aagatctttt acttgcaaat
    14401 caagcgcaaa atttccacct ttaatataag caataatatt atctatatcc tcgtggctta
    14461 aatttctagc ataaaaagcc atttgagaag ctgttgtaga actgctacta tcaagagtat
    14521 aacctatcaa agctccttta atatcctcag gagacatatc ttttaaaatt ctagatccta
    14581 taacactctt ttcagcatta tctccatggc aagtattgca tttattttga aaatacaaag
    14641 ccttcgcttt ttccatatca tattgcttat ttgcatcaaa ggtataagta aaaaatgatt
    14701 tcaagttaat accaaaaagc gcaacaacaa atattgaact aataaacaac cagcgtgcaa
    14761 tcatgatttt ccttatttta ttgtaatttc tgtttgtgtt ttattttgat atctatgtgt
    14821 ttttttgttg tatttttttt cttttttaat atcatagcga taacgaacag tccctgaaac
    14881 ttctatatct ttaaagactt catctaacgg agctgcaaaa acaaaatgat ttaaaatcat
    14941 accaattaaa aatatttttt tcatttttat tctttaaaca caaaaaaacg attatatcaa
    15001 aaaaagataa tccttgttaa tgaccacctt tgtgtaaaaa ataaagtcct acacaaagag
    15061 ctaaaatcga tccagcaaga aaagccatat ccacaggagt agcaaatttc atctgtaaaa
    15121 ccctttgaaa gaaatttacc actaagacca taatgataac ttttgcaagc ttgtctttta
    15181 attgatctaa gctatgcacc tctaaaacct tgctttgttt tgtttgttta aattcttcta
    15241 tttcactgat aaaaagctca taaactccaa aagaaaaaat aaacaaaact aaagccataa
    15301 gataaagatc aacagctcct ataattaaag ccaccacatc ctcatgcaaa tcgacattag
    15361 aacctgcatc aaaaaaataa ttataagtat aaaatataac ttttaaaaca tcataacttg
    15421 caataaaaaa caatacaaaa gctccaatta aaccaaaaat tacgggtaaa attgtaacaa
    15481 tacgacttct aacaagtaaa gattcaaata ttttctctaa catttttttc cttatttatt
    15541 ttttaattct aaccattttt gcgcaatacg cacagcattt gttgcagcac ctacacgaat
    15601 ttgatccgcc acacaccaaa gatggagtat ttttttatca tacacatcag cacgaattct
    15661 tcctacataa gtttcattag tatcgctagt cattaaaggc atagggtatt ttttattttt
    15721 aggatcatct atgacaataa cacttggtgc tttttttaaa atttctttag ctttttttac
    15781 atctatttct ttttcaaaat gcatagtaat ggcttcgcta tgacttctta aaacaggcac
    15841 tctaacacaa gttgccgaaa cttctaaatt tttatgtaaa attttttgag tttcattgac
    15901 cattttaagt tcttctttag tgtaatcatt atccataaaa acatcaattt gtggaataag
    15961 attaagtgcc aaagtataag gaaaagtttg aggttcaaat tcatcaagtt taaaagcaaa
    16021 aaaactttgc atagcttcaa ccaattcttg cattccttct tttcctgctc cacttgcagc
    16081 ctgataggta cttacatcaa cacgctttaa attaaatgca tcatttaaag gttttaaaac
    16141 ttgcaccatt tgtatagtag aacaatttgg attagcaata atccctgttt ttttccaatc
    16201 tttaatatcc tcaggattgc attcaggaac caccaaagga acatcttttt ccattctaaa
    16261 atgacttgta ttatcaataa caacagcacc agattctact gcaaatttag catatttttc
    16321 actcacactt ccacctgcgc taaaaaaagc aatatcaata ggattttctt taaatacatt
    16381 ttcggtaagt tctttgactt tataagcttt gcctttaaat tctacttcac tacctacact
    16441 ttttgcactt gctaaaggta aaatactttc cactgggaaa tcaagttcat ctaaaacatt
    16501 taaaagctct tccccaaccg caccagtagc acccacaatg gctatttttt gtttttttga
    16561 cattacttat cctttatttg atatttttta attttttcat ttaaaatttt tatatccata
    16621 cctaaaattt gagaagcttg atccttgtca taatctacac ttaaaagaac ttcacaaatc
    16681 aattcttttt ctaaattctt tacatctttt tttatacttc tagcttctaa gaacaaatct
    16741 tcacttgaaa tttcatcatt ttcacttaaa atacaagctc tttgtacaac ggatattaat
    16801 tctctaatat taccaggaaa atcatattca agtaaagcat ttttagcttc ttggctgagc
    16861 tgtttttcct taaaatcata ttctttacaa gtatcttcta aaaccttttg agctatacct
    16921 aaaatttctt ctttacgctc tcttaaaggc gggatattaa taggaacagt gtttaaacga
    16981 taatataaat ctgaacgaaa ttcgccattt tttatttttt catctaaatt tgcattagtt
    17041 gcactgataa ttcttacatc tattttgatg ctttttgtac ttccaagtcg tgtgatttct
    17101 ttttcttgca aagctcttaa aagtttagct tgaatttcat aaggcatttc accaatttca
    17161 tctaaaaaca aagtgccctc attagccatt tcaaaaagcc ctattttagt tgcattagca
    17221 tcagtaaaag cacctttttc aaaaccaaaa agctcacttt caatcaaatt tgcaggaatg
    17281 gctgccatat taatagcaat aaaaggctta ttagagcgtt tagaatgggt gtgaatataa
    17341 cgagaaaata cctcttttcc tactccactt tctccaaaaa acattacaga ggcatcagtt
    17401 ttagccgctt tttgacttaa atttaatgtt ttttctaaat taggagaagt tgaaaaaaaa
    17461 tctttatttt cttctttttt ttcatttttt ttgctttttt tatcggctgt tttttctctt
    17521 atgattttag cacgcttaat agcctcgact aaagtatcaa catcaaaagg cttggttaaa
    17581 aaatctttta ctcccaaacg aaccgcttct atagcacggc ttaaagtagc atttcctgtc
    17641 ataataataa aatcatattt attttcacag gctttaacaa attctatgcc atcaattcct
    17701 ggcatattaa tatctgtaat aatcaaatct gtattatcat ctattttttt taaagcttca
    17761 gtggcagatt tataagattt aatattaaat tcttcatact ctgctaatgc aatttctaag
    17821 gatttgcgca tattaatatc atcttctact atgactaaat tcatcctaag ccttttaaaa
    17881 aatttctact atagtatcca atttgcgctt aattttgaat ttactttttt ttaagataat
    17941 aaattatcgc attttgttcg ccaaattcta cggtaaaacg caagggtaaa attttaacat
    18001 aagtttcact ttgagcacgt aataagtcag tattaacaat atccttaaca ctgattctag
    18061 ctcctataaa gcaatcgctt aattcatctt tatgagaatt taaaaaatta aatttaattg
    18121 tttttggcat attatcatca atcaatccta aagaagttcg aggtaaaact tttaaatctt
    18181 gatcactata agaaatttca catacccatt gttcttcaac attttcgctt tgcgtcattg
    18241 ctaaggataa attttgattt tgatgaaaga gaatgaaatt tttactagaa agctctgccc
    18301 aaaaaataaa ttcatcttgg gcaaaaagct taaagctaag aaagattaat aagcaaacaa
    18361 ttctttccac ttgtctgcat cgattttaag ttctaagttt actctataaa gcccttgatt
    18421 aaaattctca tcaataatac ttgcattttt tatcaaacca tttacttgcg cagtaatagt
    18481 tgaacttcta agcattgcat cttttacagt gtctttacca ttcactttca caccataaag
    18541 tttacttgca agctgtctgt aagcatctgt aatcgctgct ctttttgcta aagctagagc
    18601 ttgagcagta gaaactgtat tcattggagc aattccttca ccaactgctg taaaactaag
    18661 ttccgtttcg ctagcatctg gagccaacat tttttcttct ctgataatat cacgcacatc
    18721 atctttatcg actttttgca cgataacatc ttgagatgga gcagtgctat ttgcacttga
    18781 atttttagtt gcactgtttg cacttggtac acaaccagcg aaaattcctg ctattgctag
    18841 cataaaataa atttttttca tttttacacc ttcaaaatat tgtaattagt aaaataaaaa
    18901 gcaataagcg ttccaacttt aaacttattg caaatctaaa ccaaagtttt catcgcttaa
    18961 ctcatcctcg tcattttcct ctttaggaca cttagcgatg ctaaccacct cgtcattttc
    19021 cacattaact acaatgacac cactcgtatt acgccctgct tttctaatgc tttgcatatc
    19081 aacacgtatc atcttacctg aacttgtaag agccattaaa tccatagttt catctactat
    19141 aactacgcta ataagatctt tggttttttc tgtaagtttc atacaaatta cacccttacc
    19201 acctctgctt tgcaatctat attctccagc attggtgcgt tttcctatac cttttgcact
    19261 tatgcttaaa atttcttgct catcattttc tataacaact gcacctacta attcgtcatt
    19321 tttctcttta aacttaatag ccgtcactcc acgacttaca cggccgattt cacgcacttt
    19381 agcaagtggg aatttgatac acataccttt tttggttact gcaaagagca ttttaccttg
    19441 tgtgcttaca ctttcttcat tttcaagatt ttcatcatct aaattttcaa tttcttgatt
    19501 ttctaaattt tcttcaccac cagtggcaaa aatttcatct tcatctcttt gaacaataat
    19561 agcagttacc aactcatcat tttcatccaa gttgatcgct ctaactccta cacttctgat
    19621 attttgatat tcactcaaat ttgtacgctt tacaatacca tttttagtaa agaaacataa
    19681 agatttactc tcatcaaaat ccgtggttgg aataatagcc atgatttttt cttcagcttg
    19741 taaattaata agatttacca ctgcttttcc tttagccgtt cttgagcctt caggaatttt
    19801 ataaacttta agccaataaa gctgtccacg atctgttaca aacataagtg tatcatgtgt
    19861 atttgccgta aagaaacttt ctataaaatc atcatcataa gtcgtaacgg ctaattttcc
    19921 ttttccgcct cgtttttgct tttcatattg tttactaggc acacgcttaa tataaccacg
    19981 atgcgtaata gttacaacca tattttcatt aggaatcaaa tcttcaatat caatatcatc
    20041 ataatcatct tcaatttgag taatacgtgg cacatcaaat ttacttctaa tttcttttaa
    20101 ttcatcgcga attaaatttt caagcaaggt ttcacttttt aaaatttctt caagtcttgc
    20161 aatttctttc attaattctg caagttcatt ttcgattttt tctctttcaa gtcctgttaa
    20221 acgaccaagt ttcatatcta aaatagcatt ggcttgaagc tcactaagac caaatttagc
    20281 tactaaagaa tctcttgcgg tattattatc agaactattt ttaattaaag caatcacttc
    20341 atctatatta tcaagtgcaa ttttaagacc ttctaaaata tgagctcttg ctcttgcctt
    20401 ttgaagttca aaaatcgttc ttctaataat aactgttttt ctatgagtta agaaaagatt
    20461 taaaagttcc aacaaagaga aaattttagg ttctttatta tgaattgcca acataatcac
    20521 accaaaagta ctttccatag tggtagattt aaatagatta tttaaaacaa tttcactcat
    20581 agcctcacgt ttaagctcta taacaacgcg gattccttct ttattgctct catctcttac
    20641 ttcagatatt ccttcaattt gcctttcttt aacaagctct gcaatctgct ctataagcct
    20701 agctttattg gtttgataag gaagctcatc gataacaata acatctttat ttgtcttttt
    20761 ttcaatatga gttttagctc gcactttcac gcgaccacgc cctgtgcgat aagcttctat
    20821 aatacctttt ttaccataaa ttattccacc tgttggaaaa tctggacctt tgataaactg
    20881 cataatctct tctaggcttg catctttatt atcaagcaaa tataaaagtc catctatcaa
    20941 ctcatttaaa ctatgaggtg ggatgtttgt cgccatacct acagctatac cacttgaacc
    21001 atttaataat aaatttggaa ccctagaagg taaaacatca ggttcgcttt ctgaaccatc
    21061 ataatttgga acaaaatcga ccgtatcttt atctatatct tttaaaagct catgagaaag
    21121 tttactcatt tttgcttcag tataacgcat cgcagcggca ctatcaccat ctatagatcc
    21181 aaagttgcct tgtcctgtaa tacttggata tctcatagaa aaatcttgag ccattctaac
    21241 caaagcatca taaactgctg tatctccatg tgggtgataa cgacctataa cagcacccac
    21301 tatacgggct gatttgacaa aatctgttct actttttgcc tcatcatttt gcatagcata
    21361 taaaattctt ctatgaacag gctttaaacc atctcttgcg tcaggcaaag cacgacctat
    21421 aataacactc atagaatagt ctaaataact actttttata gaattttcta tatctacaag
    21481 ttcaatatca gaatctttgc taaaaatatt ctccataaaa atccttctat tagttcaaag
    21541 ttttgattat agcatattaa acttttgcat cagctaaaac aagagcaaaa agtacagaaa
    21601 ttttattttc ttctaaaact tttttagctt ccaaaaggct agaaccagtt gttacaatat
    21661 catctactaa aattacaggt tcgtgaatgg tttttaagag tttgtaattt cttttatgtt
    21721 tttgacgaaa ttctaaactt tttccagaat atttcacaga attttgtgct tttaaaacat
    21781 taaaaacagg ttttacaaat tttgttttaa gatatctagc taaaatagca gaatgtgaat
    21841 aaagcatatc ttcaacctta tcatctaaag ctataacatt aattgtcatt ctaggatcaa
    21901 aaaaatcttt aaattttgca aaacttaatt tagcaagcat tttataaaca aaataaccat
    21961 aaaaataatg tttagagtga agcaagtgtt gtatttcatg gtatttataa aaagaataga
    22021 ctttgaaatt attatcaagc tttcttacat ttaaggaaaa ttcagaaagc tctagctcgc
    22081 ataattcaca aaagcagagc agagcaaaag ctccgcaatt tatacacctc aaagttcaga
    22141 gattaaacta gctgctttat ttgccatttg ttttattaac aaatgagtat aaaaagttgt
    22201 ttcttttaaa tcatcaaaac cttgtacatc ttgcttggtg cggattgtaa atttcttatt
    22261 tttatttata tcactaactt gtaaaactcc tactagtttt gaatgtaatc ctatagcatc
    22321 ttgagttgct ccataagata taaattctaa atcaatctta ctcacataag gtgaattttg
    22381 atcgttattg tcaagcacaa ctattcctct agcttcaagt tcttgtttta aataagtata
    22441 aaataccgca ttaaaattca catcgacaaa taactttttc cctttagcat ttaaaacctt
    22501 ttgcccttct tttaaatcat aaaatctatg taaataaacc tttttcaaag caataccagt
    22561 gtctaaagtg cgtttattgg cacaacattg aattccaaca tcgctaatgt ataaaagccc
    22621 tttaatcttt gcttcaaaac caccaggact ttcacaagaa ctgcattgag aatttttaga
    22681 aatttgatta acttgagcaa aagtatcttg tttagttgca caagcactca aaaataaaat
    22741 aggcactata aaaatcaaaa attttttaaa cattttttct ccttagaaaa ttattttaaa
    22801 attgtattaa aaatacaagc aaatttcaag ccaagtttta aatttatcat caatctatct
    22861 ttaaaacact caaaaaagcc tcttgaggta aatttacctt acctatagct ttcattcttt
    22921 ttttaccttc tttttgcttt tctaaaagct ttctttttct agtaatatcc ccaccataac
    22981 attttgctgt cacattttta cccatggatt taacagtttc tcttgcgatg attttatttc
    23041 caatacttgc ttgaatggcc acttcaaaaa gctgtctagg aactatttct ttcatagcac
    23101 taacaagttc tcttccttta ctttgcgctt tttcattagg cacgataatg cttaacgcat
    23161 caacattttc acccgctacc ttaatatcaa gttttaccaa atcccctact ctaaattcta
    23221 taggctcata atcaaaactc gcataacctt ttgttaagga ctttaattta tcataaaaat
    23281 ccatcacaat ctcatttaaa ggcacatcat attctagcaa aacacgctca ggtgtgatat
    23341 agtccatttt aacctgcact cctcttttgc gatttaaaag agtgattaaa ttccctaaaa
    23401 attcacttgg agtaatgata gtagctttaa cataaggctc ttttatatga tcgattttat
    23461 taacaggagg aagctcgcta ggattttgaa ttttaataag ctctccatcg gtttgataaa
    23521 tttcgtaagt cacagttgga gctgtagcaa tcaaatcaag attaaattct ctctcaagcc
    23581 tttctttgat aacttccata tgtaaaagcc ctaaaaatcc taccctaaaa ccaaagccta
    23641 aggccaaaga agtttcaggc tcataagtaa tagaactatc attaagcttt aatttatcca
    23701 aagcatctct taaatcttca aatttatccg tttctatagg ataaagtccc gcaaacacaa
    23761 aagctttagc cttttcaaaa ccacctatgg cttctttagc tttgtttttt accaaagtga
    23821 tggtatcgcc tacttgtaca tcacctacgg ttttaagccc taaaaccacc acacctactt
    23881 cgcctgattg taaagattga gttttaattg gacttaaagg gtggggataa aaaagatctt
    23941 gaactatatg ttttttatcc gtactcatga ctaaaacttc atcgttttta gcaatacttc
    24001 cttcataaat cctaaccaaa gccaaagcac ccaaataatt atcaaaccaa gaatcataaa
    24061 ttaaagcctt agtaggagct tcatcatctg tttttggtgc agggatttta gtaataattg
    24121 tttctataag ctcttttata cccactcctg tttttgcact cacgcaaatt gcatctttgc
    24181 aatctatacc tataatatgc tcgatttcat gctttacttt ctcaacatca gcattaggta
    24241 aatcgatttt attaatcaca ggaatgattt caagattatt ttcaagcgct atataaacat
    24301 tagctatagt ctgtgcttca acaccttgag aagcatctac tacaagcaaa gccccttcac
    24361 aacttgccaa agaacgactc acttcataag aaaaatccac atggccagga gtatcaataa
    24421 gatttaaaac aaaattttca ttattaaatt tataatttaa acgcactgat tgtgctttta
    24481 tggtgatacc acgctctttt tctatatcca tagtatccat aacttgtgaa ctcatctgcc
    24541 tatcgctaat agca
//
LOCUS       DAPIVO010000018        23465 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.018, whole genome shotgun sequence.
ACCESSION   DAPIVO010000018 DAPIVO010000000
VERSION     DAPIVO010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23465)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23465)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23465
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.018"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(63..2429)
                     /locus_tag="RJ239_000699"
     CDS             complement(63..2429)
                     /locus_tag="RJ239_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein"
                     /protein_id="HDV7330831.1"
                     /translation="MRILFLILLSFLNAFAFELVLNTGRENNQAFAVLHASNDLEFTC
                     QKFITEAKVHFECDIVGMVDNKLKDQSFSAFDLKFIQEAQKIKMIILPKIQARMFDTS
                     QNIYIDKELSSSSSHKSKAFTFIFTPELAPIKDYDGLDFNINFPHESLPYVGALDLNS
                     DPVVIPQSADINTYLRIKKEYDKANYNQVVIDAQNAINRYRGSIFTSEFILYKLRAQN
                     KLYTQDPSMRDQQILEKMIDDAKNWTRTFTSDKNFSEVLHIMLRTYIALAQRADVEYT
                     MSILDNEQPNNYFTQLSKLDYADYIYNLNEKEKAVNIYENTYFNTKNLDLAARAAMSL
                     AKNLLSNEQVNKAIEYINTILKANPEYFGKDIPRSLELAKLFNQKGQFDISASIYEDA
                     FAKMSKLDPSYEETLKDLALVLSHANRSSDAKKYLDLYMDDYLDGKYLDEIKKASDEV
                     FFALGDNNASFLHQRYTDLMKQYANKDENIANKALDEDVALYYKEGNFSAILAYKDLI
                     ESKKIPNATQFLEKAAINDLKNAIKADNCINAANIFMRFSAYDIGQKIENKKQMLACL
                     IRTSNVEQALDYIDKNYNEDSIFYGLQKASILFDNKQYPQVIKISKDIANSRILKSDD
                     ENFKAYYLQFLSLLRLNDYNQAIKILQILESFPMNFSMVEAYDALLSYANDHNMQTTI
                     LTYAPKAIDYQNFKGINLFSPNLEFIYLDALTKINKNEESLAVLTDLLKLKLSDEDRA
                     RALYIQALTYERMQNIQAEKESLKQCLEIKSASNWQNLCKSKNQILNQ"
     gene            complement(2451..3839)
                     /locus_tag="RJ239_000700"
     CDS             complement(2451..3839)
                     /locus_tag="RJ239_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HDV7330832.1"
                     /translation="MLNNFLNLELLNISLSYPFLFLITTAIVLLLCSGFWKFHRSFYI
                     GISSLSLIVSAFLILNNANAQGLEAKAFLATLNNDIVSFYASLVILCFSFLYLLMQKE
                     ENQGEFYALFLFMIASLLLMVSSSNLVLIFIGLESSSLALYTLIAMRGSDNAISSAIK
                     YFSVAAVGAGFFVMAVAFIYLKTGTLDLSANLALKNEFQKDPMLLGAGVMIFVLCAIK
                     LSLAPFHFWLKDVYYAAHTNLVAFISVVPKVAMLVVVIRLFDFLNNTGFEYIIIVLAI
                     FSMLIGAFAALSQNNIKKMFAYSSVVHSSLVLVACIPLLKEQNFDGILLAIFGYWTLF
                     AFANYAVFMILSNYENNSYESLNGLLVKKPLIAFCLSISVLSLAGIPPFGVFWGKFMI
                     LNTAILNGYWYLALFVALSSVIMLYAYLKILIHALFMKNDRVHNIKFSFIQNFILAFC
                     VCVSTFVILLML"
     gene            complement(3829..5316)
                     /locus_tag="RJ239_000701"
     CDS             complement(3829..5316)
                     /locus_tag="RJ239_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HDV7330833.1"
                     /translation="MLNYLIFFPLISAFVVLLLNRGGVKVFSVVVSFMILALNLDIFA
                     DFLQGVSFDYNLSFKILKFFSFHVGVDSIALVLILLSSLMIFLSFLFLKLEQKALISC
                     IFFLEFAIMGLFSAKDGLLFYVFWEFSLLPLLYIMGVYGKDFRAGVKFFIYAFAGSIL
                     MLVALIYQAYLNYQLLNIFTFDLEIWKNNASAVNFTEQLLLFGAFFIAFAIKAPLFPL
                     HTWAPKVYANSPILVSVMLVVFKMAPFGFLLFCLPLFPDASVYFMPLIVALCIVSIVY
                     NALIAYRAENIKELIAYSSISHLGVMILGIFSLNALGISGAVFYMFAHGIVTGALFLM
                     VELLYQRYHTYDISFYHSLAKKAPLFSIFFMLILLASVSLPLTVSFVGEFLILLGIAK
                     INLFYALLAGLVIILGAIYMFAVFRKIFFMQKQSFIEGFSLLFREIVALVCIVVMIFG
                     LGLMPNILLKPIQKDVDNLIKTMNIRAVEQNTLDFLSKIGEANVK"
     gene            complement(5318..7108)
                     /gene="nuoL"
                     /locus_tag="RJ239_000702"
     CDS             complement(5318..7108)
                     /gene="nuoL"
                     /locus_tag="RJ239_000702"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HDV7330834.1"
                     /translation="MQNLALISLFSPFIAFLFASCFALSEKKQFVGIICSLLVALSAF
                     CSLYLLFCNEAFNVSLFEWFAGVNFGFDIDAISLTMMSVVGIVATCVHFYSIFYMAHD
                     EGFNKFFAYLGLFVFSMLFLVMSDNFLGLFVGWEGVGLCSWLLIGFWYKNATYSFAAN
                     EAFIMNRIADLGMLLGIFWLYLQAGTLKYDEVFSMAQSLDHNALILIATCLFIGAMGK
                     SAQFPFHTWLADAMAGPTPVSALIHAATMVTAGVYLVIRASTLYDLVPEVSYIIALLG
                     AFVAIFAASMALVVRDLKRIIAYSTLSQLGYMFVAAGLGAYGIALFHLATHAFFKSLL
                     FLGAGNVMHAMNDKLDIKKMGGLFKPLKITAILMCIGSLALAGIYPFAGFFSKDLILG
                     YSFISFHHGIFLVLLIAAFLTAFYSFRLLMLVFFTPARHDEHPHEASKIALLAMSPLM
                     VLAIIAGFFEHSFFEYLSTKLVFIDAQNQIVMICASVAAILGAILAIFAYKNSWFKES
                     IEENKIHKLLSNDYFIPQFYHQFIVSKYESLCAILKHCDLYIFDRIVEKIALYSQNIS
                     QKMIMPNSLNLMLRFLVAAFVILLILVWMV"
     gene            complement(7110..7406)
                     /gene="nuoK"
                     /locus_tag="RJ239_000703"
     CDS             complement(7110..7406)
                     /gene="nuoK"
                     /locus_tag="RJ239_000703"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HDV7330835.1"
                     /translation="MIEKYFFIAILMFVIGLVGILKRQNLIMLFISSEILLNSANLAL
                     VAASKMHNDLNGQVFALFIMGVAACEVAVGVALCVLWYRRKGTLELKSLKEVEA"
     gene            complement(7403..7921)
                     /locus_tag="RJ239_000704"
     CDS             complement(7403..7921)
                     /locus_tag="RJ239_000704"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HDV7330836.1"
                     /translation="MIENLAFVFFSVVVLGFFGIAVLSKNMLYSLSALAGGMVFLSGF
                     YFLLDAEFLGVIQIIVYSGAVLGLYSFAMMFFDASKEFKEQLKAKKSFFTLVVLSAIL
                     LLAMLIGFKYQNISTDLPLNDPALFDFNKQLALAIFSKYLLAFEFIAILLLIALVCAI
                     VLTHKELTKEKQ"
     gene            complement(7918..8559)
                     /gene="nuoI"
                     /locus_tag="RJ239_000705"
     CDS             complement(7918..8559)
                     /gene="nuoI"
                     /locus_tag="RJ239_000705"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HDV7330837.1"
                     /translation="MKNYYLVDEKRKTPVSTWEKISQALRRSVKLELFVGLFVMMREL
                     LKRNNSATIKYPFEKVKLDNRYRAVHRLMRFIESENERCIGCGLCEKICISNCIRMET
                     SLDENGRKKVENYSINLGRCIYCGFCAEVCPELAIVHGTEYENAAEQRSYFGYKQDFL
                     TPIDKLKNQVEFEGAGSLRKDANLWVKKTPNYYDAMLESALENQNTQEQGENK"
     gene            complement(8569..9567)
                     /gene="nuoH"
                     /locus_tag="RJ239_000706"
     CDS             complement(8569..9567)
                     /gene="nuoH"
                     /locus_tag="RJ239_000706"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HDV7330838.1"
                     /translation="MSDFAFFALETLIKCIIIIAIFASLAGLATYAERKVLAYFQRRI
                     GPDMVGPFGLIQLVADMIKLFTKEDIIPSNSQKFIFAIAPLISAICAFVSLAAIPMLP
                     EFTLFGRVIQPIVADINVALLFVIGTSGLCFYAVFLGGLASNNKWSILGAARGLVSII
                     SYESVGALALIAIIMLVGSFSLVDINNYQSDGFFSWLIFKQPLAFVLFIIALFIETNR
                     TPLCLTENDAEIVAGYGTEYSGLRWGMFFIGEYTSMIAGAILVTLLFLGGFNSFWIIP
                     GWIMMIVKSSFIFFWYFWARAAFPQLRPDQVMKMCYLILIPLAVLNLLITALTVLL"
     gene            complement(9560..12022)
                     /locus_tag="RJ239_000707"
     CDS             complement(9560..12022)
                     /locus_tag="RJ239_000707"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit G"
                     /protein_id="HDV7330839.1"
                     /translation="MTVKINGIDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLAC
                     RMCMVEADGKKVYSCNTKAKEGMVVESDLQNLWDERNEIMQAYCINHPLECGVCDKSG
                     ECELQNFTHKSRVNVQKHWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESA
                     LKTVPRGGDSVDNSFKESMGKDAYAIWTKFQKSLIGPANGDTLDCSFCGECTSVCPTG
                     ALIGSKFQYTSNIWELKRIPASNPHSSDCELMYYDIKQSGISNQKEKIYRVSNDFAFA
                     SLNKAARFAFDTQNEADKDEKAFKELVELFEKNEIKNIKFNSFITNEEALILQNLKKK
                     FNLSLINEEALKFKEFLQEFIANSGEFYSANTQDITKSDFLVVAGMLLRYDAPTLSYK
                     INNALVMNKGSGLYFHPMEDMGIAKYSKNFIPHIHKNGDEEQILYFLLQKFSQDEGIK
                     THLAEFFVSENKEIEESINEEVVEQVIEKDEEGNEIQKEVKKVVPKKVKKIIEVQRSV
                     FAKNLGIDEDKLEDLLLKKANFTLVVGSDFYFHKNAKKLAKLLALIQNTTPFKVFLNP
                     THTNTLGVAMICDLDNNTQEGKTLGYNEKGDFSFSYEEHANLASASLNQQEGTFLNYD
                     KRVVPTNAALEFKGYFLNDLANALGFDEEYTINYTKRLPINKGFSPIDFDHLDNFYTN
                     AGDCKRGYELNLECFKQVAKKEFISPNFENLSLKEDEILLYSANPSYQFGRFSNRASA
                     INEVIFLGVSENLAKEKNLKDKDLVKLKIKDKELSLSVRVDKDIKNGAFLPYFDEKLD
                     TLSFFDERFVVANLEKLGANHE"
     gene            complement(12019..12711)
                     /locus_tag="RJ239_000708"
     CDS             complement(12019..12711)
                     /locus_tag="RJ239_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330840.1"
                     /translation="MIYDNALCFLDMPSLKNKNLCEKIGVNSINISCLEDKNLKAKFY
                     KCEIASLSFVLALLCKLSDEGQFCDLDEGYLSAESCFGEEEAGEVLAFLKEVKYLIID
                     KNIHSYKDSENIKYFLNFLSVKYGLKILDSDEEECDFKKAKLNTLKELDNYDGLVLFR
                     ANLQDKNLHCSKQFLQIAKCKDQSEVEILAKDFSFKTKLCLDENLQGTIAFLNYENNG
                     FDFTPIRIKEAK"
     gene            complement(12708..12935)
                     /locus_tag="RJ239_000709"
     CDS             complement(12708..12935)
                     /locus_tag="RJ239_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase subunit E family
                     protein"
                     /protein_id="HDV7330841.1"
                     /translation="MRRVDLRKSKELFEDLAQIIKEAKQGEVLVVLFEIGDFSPVEKS
                     FSFVKEQGCELLNSLKFNQVDWTIVIKKERV"
     gene            complement(12932..14158)
                     /gene="nuoD"
                     /locus_tag="RJ239_000710"
     CDS             complement(12932..14158)
                     /gene="nuoD"
                     /locus_tag="RJ239_000710"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HDV7330842.1"
                     /translation="MQIPSKLKPYYENIAFEQEDSKMIINLGPQHPSAHGNLRLILEL
                     DGEQVVKARPCIGYMHRGMEKMAENMIYQEFIPTTDRMDYIAASANNYAYCAAVEKLC
                     GLEIPRRAAVIRMILLELNRITSHLLWLATHALDIGAMSVFLYCFREREYVLDLIEKY
                     CGARLTHSSMRIGGVMLDLPENYLEEMLAFCDKFLNDLKDYEDLLDDNRIWRLRTENV
                     GVVTKEQALNWGCTGVMLRGSGIKYDIRKEEPYLLYNEVEFGVPYATQGDSYARYKVY
                     MQEFRESLKILRQCAMLYKDTSPEILATHPEYVSASKEQILTQNYSLMQHFVLITQGL
                     KPPKGEVYVPTESPKGELGFFIHSDGTGRPYRLKARTPSYWHCAFFEEMLVGTYLADV
                     VAIMGNVNIVLGEIDR"
     gene            complement(14160..14954)
                     /locus_tag="RJ239_000711"
     CDS             complement(14160..14954)
                     /locus_tag="RJ239_000711"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HDV7330843.1"
                     /translation="MMRKYSDKKNAQTQNYYKDRFYHAPHTVKSDVNESVFKEDFEVL
                     KTQVEILNSFVELDFWVIEIKKEDNVKTLQMLKTLGYLSFTEASAIDFIADKNGFEVF
                     YQLLNLEKKLRVRIKTFVGVKERLQSVAHVFKGANWSEREIYDMFGIFIINHPNLKRI
                     LMPDDWFGHPLLKTYPLKGDEFARWYEIDKIFGKEYREVVGEEQRDSGFADDKDTLNF
                     ARLYHEVPKGGQKKEISFKQEYQEDEGVAFVKKVKRDEAKILEKRR"
     gene            complement(14951..15454)
                     /locus_tag="RJ239_000712"
     CDS             complement(14951..15454)
                     /locus_tag="RJ239_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HDV7330844.1"
                     /translation="MAEHQVNYASGLPVVLTSVDKLVQWGRSNSLWALSYGLACCAIE
                     MMAAGGSRYDFDRFGTIFRASPRHSEVMIIAGTLCKKHAEFTRRLYDQMPDPKWVISM
                     GSCANTGGMFNTYSTVQGVDRIIPVDIYVPGCAPRPESFQFALMILQKKIRKEKASRK
                     IAPKRLI"
     gene            complement(15436..15825)
                     /locus_tag="RJ239_000713"
     CDS             complement(15436..15825)
                     /locus_tag="RJ239_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase subunit 3"
                     /protein_id="HDV7330845.1"
                     /translation="MSHIDASHPYFGIFLMLVLASVIFFGLVFLASKIGNNFAAKNRK
                     KLGLGIYECGPIPVKQANKINSQFFIIALIFILLDIEVVFLFPWALIFKDLGWFGFLE
                     VFVFIVLLGVGFLYAYKKGAFAWQSIK"
     gene            complement(15938..16603)
                     /locus_tag="RJ239_000714"
     CDS             complement(15938..16603)
                     /locus_tag="RJ239_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDV7330846.1"
                     /translation="MLKVCNLSKFYELKKHWYLKKERHIIFDNVNFSLNENDNLIILG
                     KSGAGKSTLARILCFLEDPSEGEVWYENLNLHKLDKNKQRLLRKQIQYCFQDQKMALN
                     PYKKIKNLIQDGLENFNLQKNDDLILEFFDFFSLKKQILEQKSYELSGGEATRVGLIR
                     ALVLNPKLLILDEITSAFDIKTSKEILTFLYDYQQKNNISYIFITHQSDLFYKFNHKK
                     LKL"
     gene            complement(16596..17306)
                     /locus_tag="RJ239_000715"
     CDS             complement(16596..17306)
                     /locus_tag="RJ239_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7330847.1"
                     /translation="MKVRNLNISLKNNLLLKDINLDIKTGKTLMILGQSGVGKSLLGK
                     ALVRLLDSNFTISFDELSFHNSCIFNFNKEELRNFRSKVALVLQDAELSLYPYLDIGN
                     LCHLVLKTHTKLKQKEIKDYAFSYFQKLGFENLDRLWHSYANELSLGMARRVSLALAL
                     LNQPQILICDEITASLDKENASKIISILKELKNTTALVCITHDLNLVNSLADEILMLE
                     KNSSNLYSLDEFLRYYNA"
     gene            complement(17303..18097)
                     /locus_tag="RJ239_000716"
     CDS             complement(17303..18097)
                     /locus_tag="RJ239_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7330848.1"
                     /translation="MILFKFLIILAPLIFLFLCALFAPFLASFDILSTHLENLHQAPN
                     FTYILGTDFLGRDLFSRLLFALRNSLIIGVGGSLLSIIFALCYLFLARCFFYVFWMRI
                     LEFFLALPAFLLMMFFQSMITSDVFLMIFLIALIHWCFIARIIESELKRLENLDFYKA
                     NIVLGRTKFRAFFKDLIPALKTLIFTLFIFNIVHAIATEATLSFFGLGLGFEIPTLGT
                     LLSESSKAVFIGAWWMILFPLLSLLLLFLPLLWLGNFLQKIWGIRS"
     gene            complement(18084..19028)
                     /locus_tag="RJ239_000717"
     CDS             complement(18084..19028)
                     /locus_tag="RJ239_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7330849.1"
                     /translation="MLKRLVFSIFIAFFSTFLCFVLLHFSKGSIAYANGVNSQSKEFV
                     QRIEQNLGLDKPLLEQYKIWLFKALKGDLGVSFLSGESVLKLIKERIFNTFILGFSAL
                     MLLFLLSVFLALLGYYYKESFIDKIITFLAFNFFALPPFVLALLFVLIFGIFWKILPV
                     MGSSDIGFEDDFLNRLEHLILPVLVLVLSHLALFLRIARNFINESFSQIFIQNLYARA
                     LREKDIYFLVLKYSLSPIVAYFGGSALSFMMGTYVVESVFAYKGLGSLLFKSIIFKDY
                     PIVLALIFFSVLLAAFFTFLSDIVARILNPRLRRLDFV"
     gene            complement(19028..20563)
                     /locus_tag="RJ239_000718"
     CDS             complement(19028..20563)
                     /locus_tag="RJ239_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDV7330850.1"
                     /translation="MLRWFVLLFLLFLNLEAKIPKDTLIIAVENEIARINPAYSEDHD
                     AVINLVFSGLTRFDENMSLKPDLAKSWDISKDGLVYDIFLRDDVLWHDGVKFSADDVK
                     FSIEAFKNPKNNSSIYVNFEDIKSVEILNPSHVKITLFKPYPAFLDALSIGMLPKHLL
                     ENENLNTSSFNQNPIGTGPYKFVKWKKGEYVEFKANEHFYLDKVKTPRLIIKHIFDPS
                     IASAELKNGKIDAALIDVSLLNIFKNDENFGILREKSADYRALMFNLDNEFLKDLKVR
                     QALNYAVDKESIVKNLLHDYAFVANHPLERSWANSKNFKIYKYDPKKAEDLLVSAGFK
                     KNKDGNFEKDGKILEFEIWAMSNDPLRVSLAGILQSEFRKIGVVSKVVAKPAGSFDYS
                     KVDSFLIGWGSPLDPDFHTFRVFESSQDSALNDEGWNFGHYHDKKVDIALQKARNTSN
                     LEERKKYYKDFIDALYENPPFIFLAYLDFALVYNKDLKGIKTRTLGHHGVGFTWNVYE
                     WSK"
     gene            complement(20673..23444)
                     /locus_tag="RJ239_000719"
     CDS             complement(20673..23444)
                     /locus_tag="RJ239_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HDV7330851.1"
                     /translation="MANFKAFYKEAKYIFKDRIFNDYARCYAYGIDASCYFYIPKIVI
                     IAKNEDEIKQIIQLANTYKTPITFRAAGTSLSGQSSCDGVLVVIKFAFKKIKINKDAN
                     EITLGCGVVGIHANESLAFLKKKIGPDPATINSALIGGIINNNSSGMCCGTKDNSYKT
                     LRSIRVILANGSMLDTSDALSVARFKDENKKLINELREIKEEINANKELKDLIIKKFK
                     IKNTTGYSLNAFVDYDDEIDILAHLLIGSEGTLGFVSEVKLAVLDDLEFKACALLFFD
                     NINNAANTIKEFAKVDFISSAEIMDYASLKAASTYDELRDILADIKEGNTCVLIQSEH
                     SNELKLDENINKIKEISKLAYKSYFSKNKAEYDLWWKIRKALLPIAASLRKAGSTVIT
                     EDVCFNIEDLADGIKSIQELFYKYGFGDNGIIFGHALAGNIHFIITPDLNNKLEFDNF
                     SNLVKEMSNIVASYGGSIKAEHGTGRMVAPFVEVEWGKQAYLINKKIKSIFDKDSLFN
                     PDVIISDDKDIYKKNIKQVSWIDEKLNTCMECGFCERFCPSNEYTITPRQRIAILREI
                     KRLESLNDDESKAKLKDIKKYYNHLVDSSCAACGVCSFSCPLGINFADFSLKYRKNNI
                     GFISKILGNLAYKNHEKTLKIAKFSLSIANKFDNLSLDNKLEKASNFLSIIPRTRAYL
                     PKVNDYELKSHKRVCNVVYFTSCLNKSFKPNEKMHDKRSLQEVFESLCKKANIGIIYA
                     PNDLCCGKAYENFQDIQDKNIQKINDFLSNIDSPIVLDHSACSAKLISDHSKYEIYDL
                     SEYLLKFIAPKLRIDKINENVGLYIMCAARKLDLNENIIKLTKLCTNGKVLIDNDTYC
                     CGFAGYKGFFKPQLNISATKGFKKFYAKTNIKRGFSTSSTCEIGLSDATGISWQHIAY
                     LLDECSEAI"
BASE COUNT         8752 a         4366 c         2731 g         7616 t
ORIGIN      
        1 ttaagaagaa gaggttttaa ccttagataa ctagccaaaa agctagttat ctctaaattt
       61 acttattgat ttaaaatttg atttttactc ttacataaat tctgccaatt tgaagcactt
      121 ttgatttcaa gacattgttt taaactttct ttttcagctt gtatattttg cattctttca
      181 taagttaagg cttggatata taaagctctt gctctatctt catctgaaag ttttaattta
      241 agtaaatctg ttaaaacagc taaactttct tcatttttat tgattttagt caaagcatca
      301 agatatataa attctaaatt aggactaaaa agatttatac ctttaaaatt ttgatagtca
      361 atggccttag gtgcgtaagt taaaatcgtt gtttgcatat tatgatcatt agcgtaagaa
      421 agtaaagcat cataagcttc caccatacta aaattcattg gaaaactttc taaaatttgc
      481 aaaattttaa tggcttgatt atagtcattt aaacgcaata aagataaaaa ttgcaaataa
      541 taagccttaa aattctcatc atcacttttt aaaattctag aattagctat atctttagaa
      601 attttaatca cctgaggata ttgtttattg tcaaaaagaa tagatgcttt ttgaagacca
      661 taaaatatag aatcttcatt ataattttta tctatataat caagtgcttg ttcaacatta
      721 gaagttctga taagacaagc taacatttgt tttttattct caattttctg acctatatca
      781 taagcactaa aacgcataaa aatatttgca gcattgatac aattatcagc ttttatggca
      841 ttttttaaat cattaatggc tgctttctct aaaaattgag tagcatttgg aattttttta
      901 ctttctataa gatctttata agctaaaatg gcactaaaat ttccctcttt ataataaagt
      961 gcaacatctt catctaaagc tttatttgca atattctcat ctttatttgc atattgcttc
     1021 attaaatctg tataacgctg atgcaaaaag cttgcattat tatcacctaa agcaaagaat
     1081 acctcatcac ttgctttttt aatttcatct aaatacttac catctaaata atcatccata
     1141 tacaaatcaa ggtatttttt agcatcacta gatctgttag catgtgataa aaccaaggct
     1201 aaatctttta aagtttcttc ataacttgga tcaagtttgg acattttagc aaaggcatct
     1261 tcataaatac ttgcacttat atcaaattgt cctttttgat taaataattt agcaagttct
     1321 aaagatcttg gaatatcttt tccaaaatat tcaggattgg cttttaaaat ggtattaata
     1381 tattctatag ctttatttac ttgctcattt gaaagcaaat tctttgccaa actcatagct
     1441 gctcttgcag ctaaatctaa attttttgta ttaaaataag tattttcata aatatttaca
     1501 gctttttctt tttcatttaa attataaata tagtctgcat aatcaagttt tgataactga
     1561 gtaaaataat tattaggttg ttcattatct aaaatcgaca ttgtatactc tacatcagca
     1621 cgctgagcta aagcgatata agttcttaac attatatgta aaacttctga aaaattttta
     1681 tcacttgtaa aagtacgcgt ccaattttta gcatcatcaa tcatcttttc taaaatttgt
     1741 tgatcacgca tacttggatc ttgagtgtaa agtttatttt gagctcttaa tttataaagt
     1801 ataaattcac tagtaaaaat actgccacga tatctattga tagcattttg tgcatcaatc
     1861 accacttgat tgtaattagc cttatcgtat tcttttttga tgcgtaaata agtattgata
     1921 tctgcacttt gaggaataac aacaggatca gaatttaaat ccaaagctcc aacataaggc
     1981 aaactctcat gtggaaaatt gatattaaaa tcgagtccat catagtcttt aataggtgct
     2041 agttctggtg taaaaataaa agtaaaagcc ttacttttat gcgaacttga tgaactgagt
     2101 tctttatcta tataaatatt ttgagaagtg tcaaacattc ttgcttgtat ttttggcaaa
     2161 atgatcattt taattttttg agcttcttgt ataaatttta aatcaaaagc agaaaaactc
     2221 tgatctttta atttattatc aaccatacct acaatatcac attcaaaatg aacttttgct
     2281 tcggtaataa atttttgaca tgtaaattct aaatcattac tcgcatgtaa aactgcaaaa
     2341 gcttgattat tttcgcgacc cgtgtttaaa acaagctcaa aagcaaaagc atttaaaaaa
     2401 cttaataaaa ttaaaaataa tattctcata aaataattat agcaaaactc ttataacatt
     2461 aacaatataa caaaagtgct tacacaaaca caaaaagcta aaataaaatt ttgtataaaa
     2521 ctaaacttaa tattatgaac cctatcattt ttcataaata aagcatgaat taaaatcttt
     2581 aaatacgcat aaagcataat aacagaagat aaagccacaa aaagcgccaa ataccaatat
     2641 ccatttaaaa ttgctgtatt taaaatcata aatttacccc aaaacactcc aaaaggcggg
     2701 atacctgcta aagaaagcac actaatgctt aaacaaaaag caattaaagg ttttttaacc
     2761 aaaagcccat ttaaactctc ataagaatta ttctcataat tgcttaaaat cataaataca
     2821 gcataatttg caaaagcaaa taaagtccaa tatccaaaaa tagcaagcaa aattccatca
     2881 aaattttgtt cttttaataa aggaatgcaa gctaccaaaa ccaaagaaga atgcactaca
     2941 gaactataag caaacatttt tttgatattg ttttgactta gagccgcaaa agcacctata
     3001 agcatagaaa aaatcgctag aactattatg atatattcaa aacctgtatt atttaaaaaa
     3061 tcaaacaaac gaataaccac aaccaacatg gcaacttttg gcacaactga aataaaagca
     3121 accaaatttg tatgtgctgc ataatacaca tctttaagcc aaaaatgaaa aggtgccaaa
     3181 gaaagcttga ttgcacaaag aacaaaaatc atcactccag cacccaaaag catgggatct
     3241 ttttgaaact cattttttaa cgctaaatta gcagataaat ctaaagttcc tgtttttaaa
     3301 taaataaaag ctacagccat aacaaaaaac ccagctccta cagccgctac actaaagtat
     3361 tttatcgcac ttgaaatagc attatcactt ccacgcattg ctattaaagt ataaagtgct
     3421 aaagaagaac tttcaagtcc tataaaaata agtactaaat ttgagcttga aaccatcaaa
     3481 agcaaagatg caatcataaa taaaaataaa gcataaaatt caccctgatt ttcttctttt
     3541 tgcattaaaa gatataaaaa tgaaaaacac aaaatcacca aagaagcata aaatgaaaca
     3601 atatcattat ttaaagtagc caaaaaagct tttgcttcta aaccttgagc atttgcatta
     3661 tttaaaatca aaaaagcact tacaatcaaa gacaaagaac ttatgccgat ataaaacgat
     3721 cgatgaaatt tccaaaaacc agagcaaagc aaaagaacta ttgcagttgt aattaaaaat
     3781 aaaaatggat aagataagct tatatttaaa agttctaaat ttaaaaaatt atttaacatt
     3841 tgcctctcct attttagata aaaaatctaa agtattttgc tcaacagctc taatattcat
     3901 tgtttttata agattatcca catctttttg tatcggcttt aaaagtatat ttggcataag
     3961 ccctagtcca aaaatcatta ctacaatgca cacaagcgct actatttctc taaaaagtaa
     4021 agaaaaaccc tctataaagc tttgtttttg catgaaaaat atttttctaa atactgcgaa
     4081 catataaatc gctcctaaaa taatcaccaa acctgccaac aaagcgtaaa ataaattaat
     4141 ctttgctata cctaaaagaa ttaaaaactc tcccacaaaa gaaacagtta aaggcaaaga
     4201 aacactcgca agtaaaatga gcataaagaa aattgaaaat aaaggtgctt ttttggctaa
     4261 agaatggtaa aaagaaatat cataagtatg atatctttgg tataaaagtt caaccattaa
     4321 aaataaagct cccgttacaa taccatgtgc aaacatataa aaaaccgcac cactaatacc
     4381 caaagcattt aaagaaaaaa ttcccaaaat catcacacca agatgtgaaa tagaactata
     4441 agcaatcaat tctttaatat tttctgctct ataagcaatt aaagcgttat aaacgatact
     4501 tactatacat aaagctacaa ttaaaggcat aaaatacaca ctcgcatctg gaaaaagtgg
     4561 taaacaaaaa agtaaaaatc caaaaggagc cattttaaaa actacaagca ttacagaaac
     4621 aagtataggc gaatttgcat aaaccttagg tgcccaagta tgaagtggaa ataaaggagc
     4681 tttgatagca aaagcgataa aaaatgctcc aaaaagtaaa agttgctctg taaaatttac
     4741 tgctgaggca ttatttttcc aaatttccaa gtcaaaagtg aagatattta aaagctgata
     4801 atttaaataa gcttgataaa tcaatgctac aagcattaaa attgaacccg caaaagcata
     4861 gataaaaaat ttcacccctg ctctaaaatc tttaccataa actcccataa tataaagcaa
     4921 aggcaaaaga gaaaattccc aaaaaacata aaacaacaaa ccatcttttg cgctaaaaag
     4981 tcccataata gcaaattcta aaaagaatat acaagatata agcgcttttt gttctagttt
     5041 caaaaataaa aagcttaaaa atatcatcaa agaacttaaa agtatcaata caagtgcaat
     5101 actgtctact cctacatgaa agctaaaaaa tttcaaaatt ttaaaagaga gattataatc
     5161 aaagcttacc ccttgtaaaa aatccgcaaa aatatccaaa tttaaagcca aaatcataaa
     5221 acttacaaca acgctaaaaa ccttaacgcc tccgcgattt aatagcaaaa ccacaaaagc
     5281 agaaattaaa ggaaaaaata tcaaataatt tagcatttta caccatccat actaaaatca
     5341 acaaaatcac aaaagctgcc accaaaaacc taagcattaa gtttaagctg tttggcataa
     5401 tcattttttg tgaaatattt tgagaataca aagcaatttt ttcaactatt ctatcaaaaa
     5461 tataaagatc acaatgcttt aaaatcgcac ataagctttc atattttgaa acgataaatt
     5521 gatgatagaa ttgaggaata aaataatcat tacttaaaag tttatgaatt ttattttctt
     5581 caatactttc cttaaaccaa gaatttttat aagcaaaaat agccaaaatt gcacccaaaa
     5641 tagctgctac actcgcacaa atcattacaa tttgattttg cgcatcaata aaaactaatt
     5701 ttgtgcttaa atattcaaaa aaactatgtt cgaaaaatcc tgcaataata gctaaaacca
     5761 tcaaaggact catagccaaa agtgcgattt tacttgcttc atgtggatgt tcatcatgtc
     5821 ttgcaggggt aaaaaatacc aacattaaaa gtctaaagct ataaaatgct gttaaaaaag
     5881 ctgcgattaa gagcactaaa aaaataccat ggtgaaaaga aatgaaagaa tatcccaaaa
     5941 tcaaatcttt agagaaaaat cctgcaaaag gataaattcc tgctaaagct aaagatccta
     6001 tacacattaa aatagctgta atttttaaag gtttaaaaag tccacccatt tttttaatgt
     6061 ctaatttatc attcatagca tgcattacat ttccagcgcc taagaaaagt aaagatttaa
     6121 aaaaagcatg cgtagctaag tgaaataaag ctataccata agccccaagt cctgcagcca
     6181 caaacatata tccaagttgc gataaggtag agtaagcaat aatgcgtttt aaatccctaa
     6241 ccaccaaagc catagaggct gcaaaaatcg ctacaaaagc tccaagtaag gcaataatat
     6301 aagaaacttc aggaactaaa tcataaagcg tactcgcacg aattaccaaa taaacccccg
     6361 ctgttaccat ggttgctgca tggattaatg cagaaacagg agttggccct gccatagcat
     6421 cagcaagcca agtgtgaaaa ggaaattgtg cagattttcc catagcccct ataaataaac
     6481 aagttgcgat taagatcaaa gcattgtgat ctaggctttg tgccatggaa aaaacttcat
     6541 catattttaa agttcctgct tgcaaataaa gccaaaaaat tcctaaaagc atacccaaat
     6601 ccgcaatacg attcataata aaagcttcat tagccgcaaa agaataagta gcgtttttat
     6661 accaaaaacc tatgagcaac caagagcaaa gcccaacgcc ttcccaacct acaaaaagtc
     6721 ctaagaaatt atcactcata actaaaaaaa gcatagaaaa gacaaaaagc cccaaataag
     6781 caaaaaattt attaaaaccc tcatcatgag ccatataaaa aatactataa aaatgcacac
     6841 aagtagctac aatacctaca acactcatca tagtaagcga aatagcgtct atatcaaagc
     6901 caaaatttac tccagcaaac cattcaaaca aactcacatt aaaagcttca ttgcaaaaaa
     6961 gcaaatacaa agaacaaaaa gcactcaaag caactagaag tgaacaaatt atccctacaa
     7021 attgtttttt ctcactcaaa gcaaaacaac ttgcaaacaa aaaagctata aaaggactaa
     7081 aaagagaaat caaagctaaa ttttgcatac taagcctcca cttcttttaa gctttttaat
     7141 tccaaagtgc cttttcttct ataccaaagc acgcacaaag ctacaccaac agctacttca
     7201 caagccgcta cacccatgat aaaaagtgca aaaacctgtc catttaaatc attgtgcatt
     7261 ttagaagccg ctactaaggc taaattagca ctatttaata aaatttcact cgaaataaaa
     7321 agcatgatga gattttgtct ttttaaaata cctacaagcc ctatgacaaa cattaaaata
     7381 gctataaaaa aatacttttc tatcattgtt tttcctttgt tagctcttta tgagtaagca
     7441 ctatagcaca cactaaagca atcaaaagta aaatagctat aaactcaaaa gccaaaagat
     7501 attttgaaaa aatcgctaaa gccagttgtt tattaaaatc aaacaaagca ggatcgttta
     7561 aaggcaaatc cgtgctgata ttttggtatt taaaacctat aagcatggcc aaaagtaaaa
     7621 tcgcacttaa aaccaccaaa gtaaaaaaac tttttttagc tttaagttgt tctttaaatt
     7681 ctttagaagc atcaaaaaac atcatcgcaa aactataaag tccaagcaca gctccactat
     7741 aaacaataat ttgtatcaca cctaaaaact ctgcatcaag taaaaaataa aatcccgata
     7801 aaaacaccat tccacccgct aaagccgaaa gagaataaag catattttta cttaaaaccg
     7861 caatgccaaa aaagcctaaa accactacac taaaaaatac aaaggctaaa ttttctatca
     7921 tttgttttct ccttgctctt gtgtgttttg attttctaag gcactttcaa gcatcgcatc
     7981 gtaataattt ggcgtttttt taacccacaa atttgcatcc tttctaagac ttcctgctcc
     8041 ttcaaattca acttgatttt taagcttatc aataggagtt aaaaaatctt gcttatagcc
     8101 aaaataagac ctttgctcag ctgcattttc atactctgtg ccatgcacta tagcaagttc
     8161 aggacaaacc tcagcacaaa aaccacaata aatacaacgc cctaaattaa tactataatt
     8221 ttctactttt ttacgcccat tttcatctaa agaagtttcc attctgatac aattgctaat
     8281 gcaaattttt tcgcaaagcc cacaacctat acatctttca ttttcgcttt ctataaaacg
     8341 catcaaacga tgaacagcac ggtaacgatt gtcaagcttt accttttcaa aaggatattt
     8401 aatcgtagca ctattatttc tcttaagtaa ttctctcatc atcacaaaaa gccctacaaa
     8461 aagctctagt ttaacgcttc tacgcaaagc ttgtgaaatt ttctcccaag tgctaacagg
     8521 agtttttctt ttctcatcta ctaaataata atttttcata tcaaactcct ataaaagaac
     8581 tgtcaaagca gtgattaaaa ggtttaaaac agctaaagga attaagatca aatagcacat
     8641 tttcatcact tgatctggac gcaattgcgg aaaagcagct cttgcccaaa aataccaaaa
     8701 gaaaataaaa cttgatttta ctatcatcat aatccaacca ggaataatcc aaaagctatt
     8761 aaaaccccct aaaaacaaaa gagtgaccaa aatagctcca gctatcatag aagtatattc
     8821 acctatgaaa aacatacccc atcttaaacc cgaatactcc gttccataac ccgctacaat
     8881 ttcagcatca ttttccgtca aacaaagcgg agttctatta gtctctataa ataaagcaat
     8941 tataaaaagc acaaaagcca aaggttgttt aaaaataagc caagaaaaaa atccatcgct
     9001 ttgataattg ttaatatcca ccaaagaaaa agaacctaca agcattataa tagcaatcaa
     9061 agctaaagct cctacgcttt cataggaaat aatcgataca agccctcttg cagcccctaa
     9121 aatcgaccat ttattattac ttgcaagtcc acccaaaaac accgcataaa agcaaagtcc
     9181 tgaagtgccg atgacaaaaa gcaaagctac attgatatct gccactatag gctgaatcac
     9241 ccttccaaat aaagtaaatt caggtagcat aggaatagct gctaaagaaa caaaagcaca
     9301 aatagcagaa atcaaaggtg ctatagcaaa aataaatttt tgcgaatttg aagggattat
     9361 atcttcttta gtaaaaagtt ttatcatatc agctacaagt tgaataagcc caaaaggccc
     9421 taccatatca ggccctatgc gtctttgaaa ataagctaaa acctttcttt cagcataagt
     9481 tgcaagacct gctaaactcg caaatattgc aatgataata atacatttaa tcaaagtctc
     9541 taaagcaaaa aaagcaaaat cactcatggt ttgctcctaa tttttctaaa ttcgccacaa
     9601 caaatctttc atcaaaaaag cttagcgtat caagtttttc atcaaaatac ggcaagaaag
     9661 ctccattttt tatatcctta tccacacgca cactaaggct taattcttta tcttttattt
     9721 taagttttac aagatcttta tcttttaaat ttttctcttt agctaaattt tcacttacac
     9781 ctaaaaaaat cacctcatta atcgcactag cacgatttga aaatctacca aattgatagc
     9841 taggattagc actataaagc aaaatttcat cttcttttag gcttaaattt tcaaaatttg
     9901 gagagatgaa ttctttttta gcaacttgtt tgaaacattc taaattaagc tcatatcccc
     9961 ttttacaatc gcctgcattg gtataaaaat tgtctaaatg atcaaaatca atcggagaaa
    10021 aacctttatt tatagggagt ctcttagtat aatttatagt atattcctca tcaaaaccta
    10081 aagcattagc caaatcattt aaaaaatatc ccttaaattc taaagcagca ttagttggta
    10141 ccactctttt atcataattt aaaaaagttc cttcttgctg atttaaactc gcactagcta
    10201 aatttgcatg ctcttcataa gaaaaactaa aatcaccttt ttcattgtag cctaaagtct
    10261 tgccttcttg tgtattgtta tccaaatcac aaatcatagc cacacctaag gtattagtat
    10321 gcgtaggatt taaaaagact ttaaaaggag tagtattttg gatcaaagca agtaatttag
    10381 caagtttttt cgcattttta tgaaaataaa aatcactccc tacaacaaga gtaaaatttg
    10441 cttttttaag caataaatct tctaatttat cttcatctat gcctaaattt ttagcaaaaa
    10501 cagagcgttg tacttctatg atttttttta cttttttagg tacgactttt tttacttctt
    10561 tttgaatttc attgccttct tcatcttttt ctatgacttg ttctacaact tcttcgttga
    10621 tactttcttc tatttcttta ttttcactaa caaaaaactc tgctaaatga gttttaatac
    10681 cttcatcttg gctaaatttt tgaagtaaaa aatataaaat ttgctcttca tcgccatttt
    10741 tatgaatgtg cgggataaaa tttttagaat attttgctat acccatatct tccataggat
    10801 gaaaataaag ccctgagcct ttattcatca ctaaagcatt attgatttta tagctaagcg
    10861 ttggagcatc atatcttaaa agcattccag ctacaaccaa aaaatcactt tttgttatat
    10921 cttgagtatt agcgctataa aactcaccag aattagcgat aaattcttgt aaaaattctt
    10981 taaatttcaa agcttcttca ttgatcaaag aaagattaaa tttctttttt aaattttgta
    11041 aaatcaaagc ttcttcattg gtaataaaac tattaaattt aatgttttta atttcatttt
    11101 tctcaaaaag ctccacaagt tctttaaagg ctttttcatc tttatccgcc tcattttgcg
    11161 tatcaaaagc aaaccttgca gccttattta aactcgcaaa ggcaaaatca ttactcacac
    11221 gataaatttt ttctttttga ttgctaatgc cgctttgctt aatatcataa tacatcaact
    11281 cacaatcgct tgaatgcgga tttgaagcag ggattctttt aagttcccaa atatttgaag
    11341 tgtattgaaa tttcgaacct atcaaagctc ctgttggaca cacgcttgta cattctccac
    11401 aaaatgaaca atcaagcgta tcaccatttg cagggcctat caaacttttt tgaaatttag
    11461 tccaaatcgc ataagcatct tttcccatgc tctctttaaa gctattatcc acactatctc
    11521 cgccacgagg aacagtcttt aaagcacttt cgccgatttt atccttacaa actgtaatac
    11581 aacgctcaca cactatgcaa agtgcgggat cgtaattaat cattccccaa tgtttatgtg
    11641 gtttatgcgt gtctttaatc caatgttttt gaacatttac acgactttta tgagtaaaat
    11701 tttgcaattc acactcgcct gatttatcgc aaactccaca ttctaaagga tgattgatac
    11761 aataagcttg catgatctca tttctttcat cccaaagatt ttgtaaatca ctttctacaa
    11821 ccataccctc ttttgcttta gtattgcaag aatatacctt tttaccatca gcttcaacca
    11881 tacacatacg acaagccaaa gtaggactac agcccgaaag atagcaaatc gctgggataa
    11941 aaatatcatt tcttcttgct atatttaaga tatattcgcc ttcttcaaag gcgcaatcta
    12001 taccattaat cttaactgtc attttgcttc ctttatgcga attggagtaa aatcaaaacc
    12061 attattttca taatttaaaa aagctatggt gccttgtaaa ttttcatcta aacaaagctt
    12121 agttttaaaa ctaaaatctt tagctaaaat ttcaacttca ctttgatctt tgcattttgc
    12181 aatttgtaaa aattgctttg aacaatgtaa atttttatct tgcaaatttg ctctaaaaag
    12241 cactaacccg tcataattat cgagttcttt tagggtgttt aattttgcct ttttaaaatc
    12301 gcattcttct tcatcgctat ctaaaatctt taatccatat tttacactta agaaattcaa
    12361 aaaatatttg atattttcac tatctttata agaatggata tttttatcta taattaaata
    12421 cttaacctct tttaaaaaag caagcacttc gcctgcttct tcctctccaa aacaagattc
    12481 agcacttaaa tatccctcat ctaaatcgca aaattgtcct tcatcgctta atttacaaag
    12541 caaggccaaa acaaaactca aacttgcaat ttcgcatttg taaaatttag cttttaagtt
    12601 tttatcttcc aaacaagaaa tattaatgct atttacacct attttttcac ataaattttt
    12661 gtttttaagg cttggcatat ctaaaaaaca aagagcatta tcataaatca taccctctcc
    12721 ttttttataa caatagtcca atcgacttga ttaaatttca aagaatttaa aagctcacag
    12781 ccttgttctt ttacaaaaga aaaacttttt tcaacaggag aaaaatcgcc gatttcaaaa
    12841 agcaccacta aaacctcacc ttgttttgct tcttttatga tttgtgctaa atcttcaaaa
    12901 agctctttgc tttttcttaa atctaccctt ctcatcgatc tatctcacct aaaactatat
    12961 ttacattacc cataatggct acaacatcag ctaaataagt acctacaagc atttcttcaa
    13021 aaaacgcaca atgccaataa ctaggcgttc tagcctttaa acgataaggt cttcctgtac
    13081 catcactatg gataaaaaag ccaagctcac cttttggact ttcagtaggc acataaactt
    13141 cgcctttagg gggttttaaa ccttgagtga ttaaaacaaa atgctgcatt aaagaataat
    13201 tctgcgttaa aatttgttcc tttgaagcac ttacatactc aggatgcgta gctaaaattt
    13261 caggcgaagt atctttataa agcatggcac attgtctaag gattttcaaa ctttcacgaa
    13321 attcttgcat ataaacttta tatcttgcat aagaatcccc ttgcgtagca taaggcacac
    13381 caaattcaac ttcattataa agcaaataag gctcttcttt gcgtatatcg tattttatgc
    13441 cacttcctct taacatcaca cccgtacaac cccaatttaa ggcttgttct ttagtaacca
    13501 cacctacatt ttcagttctt aaacgccaaa ttctattatc atctaaaaga tcttcataat
    13561 cttttaaatc atttagaaat ttatcgcaaa atgcaagcat ttcttctaaa taattctcag
    13621 gtaaatcaag cataaccccg cctattctca tagaagaatg cgtaagcctt gcaccgcaat
    13681 acttttctat caaatccaaa acatactctc gttctctaaa acagtataaa aatacactca
    13741 tcgcaccaat atcaagcgca tgagtagcaa gccaaagcaa atgcgatgtg atacggttta
    13801 attctaaaag tatcatgcgt atcactgcgg cacggcgtgg aatctctaaa ccacaaagct
    13861 tttcaaccgc tgcacaataa gcataattat tcgctgaagc agcgatatag tccattctat
    13921 cagtagtagg aataaattct tgataaatca tattttcagc cattttttcc ataccacgat
    13981 gcatataacc tatacaagga cgcgctttta caacttgctc tccatcgagt tctaaaataa
    14041 gacgcaaatt tccatgcgct gaaggatgtt gagggcctaa gttgataatc atttttgagt
    14101 cttcttgctc aaaagctata ttttcataat aaggttttaa cttgctagga atttgcattt
    14161 taacgccttt tctctaaaat ttttgcttca tcacgtttta ctttttttac aaaagccaca
    14221 ccttcatctt cttgatattc ttgtttaaag gaaatttcct tcttttgacc accttttggc
    14281 acttcatggt aaagtcttgc aaaatttagc gtatctttat catcagcaaa accagaatct
    14341 ctttgttctt cgcccactac ttcacgatat tctttgccaa aaattttatc aatctcatac
    14401 catcttgcaa actcatcgcc ctttaaagga taagttttca aaagcggatg tccaaaccaa
    14461 tcatcaggca ttaaaatgcg ttttaaatta ggatgattta tgatgaaaat tccaaacata
    14521 tcataaattt ctctctcact ccaatttgcc cctttaaaaa catgagccac gctttgcaaa
    14581 cgctctttta cgcctacaaa agtttttatt ctcactctta attttttttc taaatttaaa
    14641 agctgataaa acacttcaaa accattttta tctgctataa aatcaatagc acttgcttct
    14701 gtaaaactta aataacctaa agttttaagc atttgcaagg ttttaacatt gtcttctttt
    14761 ttaatttcta ttacccaaaa atcaagctct acaaaggaat ttaaaatttc tacttgagtt
    14821 tttaaaactt caaaatcctc tttaaaaaca ctttcattaa catcagattt tacagtgtgt
    14881 ggtgcgtgat aaaatctatc tttgtagtaa ttttgagttt gagcattttt tttatcgcta
    14941 tactttctca tcatatcaac cttttaggtg cgatcttgcg acttgctttt tctttgcgaa
    15001 tctttttttg caaaatcatc aaagcaaact gaaaactttc ggggcgtgga gcacagcctg
    15061 gcacataaat atctacaggt ataattctat ccactccttg aacagtagaa taagtattaa
    15121 acataccgcc tgtattggca caacttccca tagaaatcac ccatttagga tcaggcattt
    15181 gatcataaag tcttcttgta aattcagcgt gctttttaca caaagttcct gcgataatca
    15241 tcacttcact gtggcgtggt gaagctctaa aaatcgttcc aaatctatca aaatcatatc
    15301 ttgaaccccc agccgccatc atctcaatcg cacaacaggc aagtccataa gataaagccc
    15361 ataaagaatt actcctgccc cattgaacta gcttatccac actggttaaa actacgggca
    15421 aaccacttgc ataatttact tgatgctctg ccatgcaaac gctccttttt tataagcata
    15481 taaaaatcca actcctaaaa gtacgataaa aacaaaaact tctaaaaatc caaaccaacc
    15541 taaatcttta aaaatcaaag cccaaggaaa taaaaacaca acttctatat ccaaaagtat
    15601 gaagattaag gcgatgatga aaaattgaga gttaatcttg ttagcttgtt taacaggaat
    15661 aggaccacat tcataaattc caagtcctaa ttttttgcga ttttttgcgg caaaattatt
    15721 accgattttt gaagctaaaa aaaccagtcc aaaaaaaata acactagcaa gtaccagcat
    15781 taaaaaaata ccaaaataag gatgcgaagc atctatatga gacatttatt ctcctttttt
    15841 aaagcacttt aatcactcca caacaaaaat taaatttaca cttttcttta ttttactcta
    15901 aactttctat attgaaactt atattaaaaa atatttttta aagttttaat tttttatgat
    15961 taaatttata aaaaagatca ctttgatggg ttataaatat ataagaaata ttattttttt
    16021 gctgatagtc atataaaaaa gttaaaattt ctttagaagt tttaatatca aacgctgaag
    16081 taatttcatc taaaatcaac aatttaggat ttaaaaccaa agcacggata agacctacac
    16141 gtgtggcttc tcctccgctt aactcatagg atttttgttc taaaatttgt ttttttagac
    16201 taaaaaaatc aaaaaattct aaaatcaagt catcattctt ttgtaaatta aaattttcca
    16261 aaccatcttg tataagattt ttgatttttt tataagggtt taaagccatt ttttgatctt
    16321 gaaagcaata ttgaatttgc tttcttaaaa gtctttgttt gtttttatca agcttgtgta
    16381 agttaagatt ttcataccat acctcaccct cacttggatc ttctaaaaaa caaagaattc
    16441 tagctaatgt gcttttacct gcaccacttt tacctaaaat tattaaattg tcattttcat
    16501 ttaaagaaaa attgacatta tcaaaaataa tatgtctttc tttttttaaa taccaatgct
    16561 ttttaagctc ataaaactta cttaaattac aaactttaag cattataata ccttaaaaac
    16621 tcatctaagc tatataaatt tgaactattt ttttctagca taagaatttc atctgctaaa
    16681 gaatttacca aatttaaatc atgagtgata caaactaagg ctgtagtatt ttttaattct
    16741 tttaaaatcg atataatctt agaagcgttt tctttatcca aagaagctgt gatttcatca
    16801 caaattaaaa tttggggttg atttaataat gccaaagcta ggctcaccct tcttgccata
    16861 cccaaactta attcattagc ataagaatgc cacaaacgat caagattttc aaatcctaat
    16921 ttttgaaaat aagaaaaagc gtaatctttt atttcttttt gttttaattt tgtatgagtt
    16981 tttaaaacaa gatgacataa atttccaata tccaaataag gataaagact aagctctgca
    17041 tcttgcaaaa caagtgccac tttagaacga aaatttctaa gctcttcttt attaaaatta
    17101 aaaatacaag aattatgaaa acttaattca tcaaaactta ttgtgaaatt agaatctaaa
    17161 agtcttacca aagcttttcc taacaaactt ttgcccactc cactttgtcc tagtatcatt
    17221 aaagttttgc ctgtttttat atctaaatta atatccttaa gtaataaatt attcttcaaa
    17281 ctgatattta aatttcttac cttcaagatc ttatacccca aattttttgt aaaaaattac
    17341 ccaaccataa aagaggtaaa aacaacaaaa gcaagcttaa aagtggaaaa agtatcatcc
    17401 accaagcgcc tataaaaact gcttttgaag actcactcaa aagagtacct aaagttggaa
    17461 tttcaaatcc taaacccagt ccaaaaaaac tcaaagtagc ttctgtggct atagcatgaa
    17521 cgatattaaa tataaaaagt gtaaaaatca gtgtttttaa agcaggtatt aaatctttaa
    17581 aaaaagctct aaatttagtt cttccaagca ctatatttgc tttgtaaaaa tctaaatttt
    17641 caagtctttt taattcactt tctataattc ttgctatgaa acaccaatga attaaagcga
    17701 ttaaaaaaat catcaaaaac acatcagaag ttatcatact ttgaaaaaac atcataagta
    17761 aaaaagcagg caaggctaaa aaaaactcta aaatacgcat ccaaaaaaca taaaaaaaac
    17821 atcgcgctaa aaacaaatag cacaaagcaa agataataga caataaagat ccaccaacac
    17881 ctataatcaa agaatttctc aaagcaaaaa gcaaacgaga aaacaaatct ctgcctaaaa
    17941 aatcagtccc taaaatataa gtaaaattag gagcttgatg caaattttct aaatgagtgc
    18001 ttaaaatatc aaaagaagct aaaaaaggtg caaacaaggc gcataaaaac aaaaaaatta
    18061 aaggcgcaag aatgataaga aatttaaaca aaatcaagcc ttcttaatct aggatttaaa
    18121 atcctagcta caatatcact taaaaatgta aaaaatgctg caagcaaaac actaaaaaat
    18181 ataagcgcaa gcacaatagg ataatcttta aaaataatac ttttaaaaag taaagatcca
    18241 agccccttgt aagcaaagac actttctacc acataagttc ccatcataaa acttaaagca
    18301 cttcccccaa aataagccac aataggactt aaagaatatt tcaaaactaa aaaataaata
    18361 tctttctccc ttaaagccct agcgtataaa ttttgaataa aaatttgaga aaaactttca
    18421 ttgataaaat ttctagcaat ccttaaaaat aacgccaaat gtgataaaac gagcaccaaa
    18481 acaggcaaaa tcaaatgctc taaacgattt aaaaaatcat cttcaaagcc tatatcacta
    18541 cttcccataa caggcaaaat tttccaaaaa attccaaaaa tcaaaacaaa caataaagcc
    18601 aaaacaaaag gaggtaaagc aaaaaaatta aaagctaaaa aagtgatgat tttatctata
    18661 aaactttctt tataataata tcccaaaagt gccaaaaaaa cactgagcaa aaataaaagc
    18721 attaaggcac taaaacccaa aataaaagta ttaaaaattc tttcttttat aagctttaaa
    18781 acactttctc cacttaaaaa agaaacccct aagtcccctt ttaaagcctt aaaaagccaa
    18841 attttatact gctctagcaa aggcttatca agccctaaat tttgttctat tctttgaaca
    18901 aattctttac tttgtgaatt aactccatta gcataagcta tactgccttt actaaaatga
    18961 agtaaaacaa aacataaaaa agtgctaaaa aatgctatga aaatactaaa aactaagcgt
    19021 tttagcacta tttactccac tcataaacat tccaagtaaa acccactcca tgatgaccta
    19081 aagtccttgt tttgatacct tttaaatctt tattataaac taaagcaaaa tcaagatagg
    19141 ctaagaaaat aaaaggagga ttttcataca aagcatctat aaaatcttta taatattttt
    19201 ttctctcttc taaatttgaa gtatttcttg ctttttgcaa ggctatatcc acttttttat
    19261 catgataatg tccaaaattc caaccctcat catttaaagc actatcttgc gaactttcaa
    19321 ataccctaaa agtgtgaaaa tcaggatcta aaggacttcc ccagcctatt aaaaaactat
    19381 ctactttaga ataatcaaaa cttccagcag gtttagccac caccttgctt acaactccta
    19441 tttttctaaa ttcgctttgc aaaattccag ctaaacttac ccttaaagga tcattgctca
    19501 tcgcccaaat ttcaaattct aaaattttcc catctttttc aaaatttcca tctttatttt
    19561 tcttaaaacc tgcactcaca agcaaatcct cggctttttt aggatcatat ttgtaaattt
    19621 taaaattctt agaatttgcc caagaacgct ctaaagggtg attagctaca aaagcataat
    19681 catgtaaaag attttttact atactttctt tatcgactgc gtaatttaaa gcttgtctta
    19741 cttttagatc ttttaaaaat tcattatcta aattaaacat taaagcccga taatcagccg
    19801 atttttcacg caaaattcca aaattttcat catttttaaa aatatttagc aaagaaacat
    19861 cgattaaagc tgcgtctatc ttgccatttt taagctcagc actagctata gaaggatcaa
    19921 aaatgtgttt tataataagt cttggagttt ttaccttatc aagataaaaa tgttcattgg
    19981 ctttaaattc aacatattca ccttttttcc attttacaaa tttataagga cctgtaccta
    20041 taggattttg attaaaagag cttgtgttta aattctcatt ttcaagcaaa tgtttaggaa
    20101 gcattcctat gcttaaagca tctaaaaatg caggataagg tttaaagagt gtgattttta
    20161 catgagaagg atttaaaatt tccacacttt taatgtcttc aaaattgaca taaatagaag
    20221 aattgttttt aggattttta aaggcttcta tactaaattt cacatcatca gcactaaatt
    20281 tgactccatc atgccataaa acatcatctc ttaaaaaaat atcataaaca agcccgtctt
    20341 tactaatatc ccaagactta gccaaatcag gttttaaact catattttca tcaaaacgcg
    20401 taagccctga aaatacaaga ttaatcactg catcatgatc ctcgctataa gcaggattta
    20461 tccttgcgat ttcattttca actgctataa taagtgtatc ttttggaatt ttagcctcaa
    20521 gattcaaaaa caataaaaat agtaaaacaa accatctaag cacttgtaac tcctcaaatt
    20581 taaaatttta aagaattata aaataaaaaa taagaagcca caagctctat ggggggataa
    20641 tttgctttaa attatggagt tttatttatc aattaaattg cttcactgca ttcatccaat
    20701 aaatacgcta tatgctgcca agatataccc gtagcatcgc ttaatcctat ctcgcaagtg
    20761 cttgatgtac taaacccgcg cttaatattt gttttggcat aaaatttttt aaagcctttt
    20821 gtagcactaa tatttaattg aggcttgaaa aagcccttgt atccagcaaa cccacaacaa
    20881 taggtatcat tatctattaa tacttttcca ttcgtacata gctttgtaag cttaattata
    20941 ttttcattta aatcaagctt tctagcagca cacatgatat ataatcctac attctcattg
    21001 attttatcaa tgcgtaactt gggagcaata aattttaata aatactcgct taaatcataa
    21061 atttcgtact ttgaatgatc actaattaac ttagcactac aagcactatg atctaacact
    21121 atgggtgagt ctatattgct taaaaagtca ttgatttttt gtatattttt atcttgaata
    21181 tcttgaaaat tctcataagc cttaccacaa cataaatcat tgggtgcata aataatgcct
    21241 atatttgctt ttttacacaa gctttcaaat acttcttgca aacttctttt atcatgcatt
    21301 ttttcatttg gtttaaagct tttattaaga cagcttgtaa aataaaccac attgcaaact
    21361 cttttatgac tttttagctc ataatcattc accttaggca aatacgccct agttcttggt
    21421 ataatgctaa gaaaattgct tgctttttca agcttattat caagacttaa attatcaaat
    21481 ttatttgcga tacttaatga aaatttagca atttttagag ttttttcatg atttttatat
    21541 gctagatttc ctaaaatttt agatataaat cctatattat tttttctata ttttaatgaa
    21601 aaatcagcaa aattaatccc caaaggacat gaaaaagagc acaccccaca agcagcacaa
    21661 gagctgtcta ctaaatgatt gtaatatttt ttaatatcct ttaattttgc ttttgactca
    21721 tcatcattta agctttcaag gcgtttaatc tctcgtaaga tcgcaattct ttgtcttgga
    21781 gtaattgtat attcatttga tggacaaaat ctttcgcaaa atccacattc catacaggta
    21841 tttaatttct catcaatcca actgacttgt ttgatatttt tcttataaat atctttatca
    21901 tcgctaatga ttacatcggg attaaataaa ctatccttat caaagatact tttgattttt
    21961 ttattgatca aataagcttg cttaccccac tctacctcca caaaaggtgc caccatacgc
    22021 cctgtgccgt gttcagcttt tatacttcca ccataagaag ctactatatt agacatttct
    22081 ttaactagat ttgaaaaatt atcaaattca agcttattgt ttaaatccgg tgtgataata
    22141 aaatggatat tgcctgctaa tgcatggcca aaaatgattc cattatcacc aaagccatat
    22201 ttataaaaca attcttgaat gcttttaatt ccatcggcta aatcctcgat attaaaacac
    22261 acatcttcag taattaccgt tgaacctgcc tttctaagac tagctgctat aggcaagagt
    22321 gcttttctaa tcttccacca taaatcatat tcggccttat tcttgctaaa atatgactta
    22381 taagccagtt tggaaatttc ttttatttta tttatatttt catcaagctt aagctcatta
    22441 ctatgctcac tttggatcaa tacacaagta ttgccctctt taatatcagc taaaatatct
    22501 cttaactcat cataagttga tgcagctttt aaacttgcat agtccattat ttcagcagaa
    22561 cttataaaat caactttagc aaattctttt atagtgtttg cagcattatt gatattatca
    22621 aaaaacaata aagcacaggc cttaaattcc aaatcatcca aaacagcaag cttaacttcg
    22681 cttacaaatc ccaaagtccc ttcagagcca ataagcaagt gtgctaaaat atctatttca
    22741 tcatcataat caacaaaggc attaaggcta taacctgtgg tgtttttgat tttaaatttt
    22801 ttgattatta aatcttttaa ttctttattg gcattaatct cttctttgat ctctctaagt
    22861 tcattaatta attttttatt ttcatcttta aatcgagcca cacttaaagc atcgctggta
    22921 tcaagcatac taccatttgc caaaatcacc ctaatacttc ttaaggtttt atagctatta
    22981 tccttagttc cacagcacat tccgcttgaa ttgttattta taatccctcc aattaaagct
    23041 gaatttatag tagctggatc aggtcctatt tttttcttca aaaaagcaag actttcatta
    23101 gcatgaatgc ctactacacc gcatcctaaa gtaatttcgt tagcgtcttt gttaattttt
    23161 atttttttaa aggcaaattt aatcactaca agtactccat cacaagagct ttgtccactt
    23221 aaacttgtac ctgctgctct aaatgttata ggagttttat aagtatttgc taattgaata
    23281 atttgcttaa tttcatcttc atttttagca ataatcacta tttttggaat ataaaaataa
    23341 cacgacgcat caatgccata agcatagcat ctagcataat cattaaaaat tctatcctta
    23401 aaaatatact tagcctcttt ataaaaagct ttaaaatttg ccatagtccc tctttttaat
    23461 ttatt
//
LOCUS       DAPIVO010000019        23118 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.019, whole genome shotgun sequence.
ACCESSION   DAPIVO010000019 DAPIVO010000000
VERSION     DAPIVO010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23118
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.019"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            17..3505
                     /locus_tag="RJ239_000720"
     CDS             17..3505
                     /locus_tag="RJ239_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HDV7330852.1"
                     /translation="MIQKALALAEELQGQIEANISNSEKEFHAKMQKLLNNPKNKVML
                     IELLDRSFRCKDKNASFELIEYTLSKYGIADFFSTFEKFLLFSFLNFGKFAPNLSVPF
                     FVKHLREDTKAMVLDANPSVLEPHIKKRKEQDKITLNVNLIGEEVLGEAESKYRMQKY
                     EEALKSSYITYISIKITTIFSQINIIDFNYSKEEVVKRLDYLYALALEEEKKQGVSKF
                     INLDMEEFRDLELTVAAFMESVAKFDIKAGIVLQAYIPDSYKYLKKLFAFSKERVLKG
                     MKPIKIRFVKGANMESEETIASQRGWELPTFYKKIDTDSNYNKMLDFILEGDNYKYIN
                     IGIASHNIFEIAYAYTRISEVGALDSFTFEMLEGMSLQCSYELSKMHDLILYAPVCDE
                     AHFNNAIAYLVRRLDENTSEDNFMRYFFNLKVGDKNWNIQKELFLKSLEGIKTLDNTT
                     HRKQDRNKESNIISSYEGKKFSNESDTDFILAQNRVWAKEIKTKYENLKDYDVYPVIG
                     ELDFKAENLNVLEVKDKIEDRVIGKAYLAGEKEIKQALEVAKNSKFTQKSHDEIYQIL
                     AKSAKLMRERRGDLIGLAALEVGKTFLEIDPEVSEAIDFIEFYPHSLEELKKQNPKVT
                     FTPKGIGVTIAPWNFPIGISVGTIAAPLAAGNVVIYKPSSLSTLTGYMLCKCFWDSGI
                     PKDALIFLPSKGSDISKYLLIDEAIKFSILTGGEDTAYAMLKANPTLLLSAETGGKNA
                     TIVSKFADRDSAIKNIIHSAFSNSGQKCSATSLLVLEEEVYHDEEFKKTLVDAASSMA
                     VGNPFEFKNKLGTLADKPSSKVQKALDELQPYEEWALKPKFLEDNPYLMTPGIKYGTK
                     KGDFTHMNELFVPILSVMKAKDLKEAIDIVNSTGYGLTAGFESLDEREWEYFHTHIEA
                     GNIYINKPTTGAIVLRQPFGGIKKSAIGLGRKVGIYNYITQFLEIKQEDFDDHLIEDK
                     FSKKLAQIDLKEAQDFINNLIKMSQSYAYHYKNEFSVSKDYVNIRGEDNLFSYTKIKN
                     MVLRLCGNESLKDVLGVVLGANIANIDLSISYDEQDVSMIERIVQSIGAKVLFLKENK
                     ENFIKSIKEYERVRYLAKPDVNDEIYKEAAKLAKIIIREKPLLNGRFELLNYFNEKAL
                     SISFHRYGNLGIRAIS"
     gene            3523..4992
                     /gene="putP"
                     /locus_tag="RJ239_000721"
     CDS             3523..4992
                     /gene="putP"
                     /locus_tag="RJ239_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HDV7330853.1"
                     /translation="MEVVQINTPIAVMFVVYALLMLYIGFYFYKQNKNSEDYFLGGRT
                     MGPVISALSAGASDMSGWLLMGLPGALYVSGFIDSYIAIGLTIGASLNWIFVAKRLRI
                     YTSVIANSLTIPDYFETRFDDDKHILRIVCAVVILIFFTFYVSSGLVSGAKLFESTFG
                     IRYDYALTTGTIIIVAYTFLGGYKAVCWTDMIQGLLMMMALIIVPLVMLYHLGGFGEA
                     MNIVREIKPQALSMGEGVGIVSIISALAWGLGYFGQPHILVRFMSIRSTKDIPMATFI
                     GIAWMAVCLLSACMIGILGIAYVHKFELSLQDPEKIFIVMSQLLFNPWIAGILLSAIL
                     AAIMSTASSQLLVSSSTIAEDFYKKIFREDAPSHIVLNLGKLGVLLVAVIAFLISTDK
                     NSSVLSIVSYAWAGFGASFGSVMLFSLFWSRMTRVGAILGMITGAATVVLWKNFANSG
                     LYEIVPGFLVASVVIIIASLFTNVRSGTKAAYEKMLKEL"
     gene            complement(5008..5235)
                     /gene="yedF"
                     /locus_tag="RJ239_000722"
     CDS             complement(5008..5235)
                     /gene="yedF"
                     /locus_tag="RJ239_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HDV7330854.1"
                     /translation="MKITYSLNLQGEACPYPAIATLDVLPKLKSGEILEVLCDCPQSI
                     NSIPQDAKNRGFKVLEIDQSGPTLRFLIQKP"
     gene            complement(5239..6447)
                     /gene="yedE"
                     /locus_tag="RJ239_000723"
     CDS             complement(5239..6447)
                     /gene="yedE"
                     /locus_tag="RJ239_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
                     /protein_id="HDV7330855.1"
                     /translation="MNSFKQKYLINFWDNSRSMIALGILSAVYFGIFGGVWAVTGEMT
                     RWGGEFLELLGMNLDGYSYYQKQNLNGTPLTRTDGIMLIGMFIGCLVAALLANKVKFR
                     LPASNIRIFQAIVGGILSGYGARLAFGCNLANFFTGLPYFSLHTWLFTVFMVLGIYLG
                     VKICNTSFFKPKAKLERVNKENLPLNKQSLRTKLYFNLGILLFIAFLVWVFYLVFTNG
                     NISTQNKQSLLALALIFGFVFGFVISRGQICFTSCFRDLFLFGRDNAIKGALIGMIIA
                     SLIAFAFILQGHTSKLIELSPAVAVGAFLFGFGIVFAGGCECGWTYRAFEGQSHFIIV
                     GIANIIGTMILALSYNFLPKAFKEGIKINLLTEFGNLNGFFINLILFILMFVFVVFYK
                     KHFFKNQLKG"
     gene            6587..6684
                     /locus_tag="RJ239_000724"
     tRNA            6587..6684
                     /locus_tag="RJ239_000724"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6621..6623,aa:Sec,seq:tca)
     gene            6712..7962
                     /locus_tag="RJ239_000725"
     CDS             6712..7962
                     /locus_tag="RJ239_000725"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HDV7330856.1"
                     /translation="MSKADIIVGIQWGDEGKGKVVDKLCENYDFVCRSAGGHNAGHTI
                     WVNGVRYALHLMPSGVLHPRCINIIGNGVVVSPEVLIAEMAQFENLKGRLYISDRAHL
                     NLKHHSLIDIAKEKLKGKNAIGTTGKGIGPSYADKINRTGHRVGELLEPQRLCEALIK
                     DFEANKTFFEMLEIEIPSAEELLADLKRFNEILTPYITDTTRMLWKALDEDKRVLLEG
                     AQGSMLDIDHGTYPYVTSSSTISAGTLTGLGLNPKEAGNIIGIVKAYATRVGNGAFPT
                     EDKGEDGEKIAQIGKEIGVSTGRKRRCGWFDAVAVRYTARLNGLDALSLMKLDVLDGF
                     EKIKICRAYEYKGMEIDYIPSDLENVQPIYEEMDGWDKVFGIKDYDLLPENAKKYIAR
                     LEELAGVKVKYISTSPERDDTIIL"
     gene            7959..8387
                     /locus_tag="RJ239_000726"
     CDS             7959..8387
                     /locus_tag="RJ239_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar FliJ family protein"
                     /protein_id="HDV7330857.1"
                     /translation="MKSKYNSVVKVRKQQLDKAESNLNQAKQRQLEHEKAYELSRQEC
                     ESLGVLPKSGSIAELRSNLSMAQVGREALARAKEKVELSKKEMNHYQFLYQKAHLDYE
                     KMKVLEAEEIKQKQKELAKAEEKFLDEIAISRFFKGEKDD"
     gene            8380..8898
                     /locus_tag="RJ239_000727"
     CDS             8380..8898
                     /locus_tag="RJ239_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotE family protein"
                     /protein_id="HDV7330858.1"
                     /translation="MIKKFILLVFISSVVFGAEQDCEQYFEARKAQIELQTREFDEAR
                     QSLEAYKASFEALQKERLENLEKKEAEVNATLAKIEELKLENARLVEEQQKILNSIND
                     KTQGRVKEIYSQMKDAAIADVLSQMDAEDASKIMLSLESRKISGVLSKMDPKKASELT
                     LLLKNLDNNASN"
     gene            8991..9542
                     /locus_tag="RJ239_000728"
     CDS             8991..9542
                     /locus_tag="RJ239_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF507 family protein"
                     /protein_id="HDV7330859.1"
                     /translation="MRIKLPHIPYIANKMMLDIANSSFVEIKDQLEKLKVCIIEVLEK
                     DILNERKLDERVKELLEQQEDEMELMQVDRKNMFWLVKKKLAPEFNVILDSEDRHNHL
                     AHQILEELVENDYINFIVSENRVKNLIFSSIESYLKIYEKLEDEVYEKISNYKTKPIP
                     GSEEYDLIFEKLYQEELRKKGMF"
     gene            9542..10660
                     /gene="carA"
                     /locus_tag="RJ239_000729"
     CDS             9542..10660
                     /gene="carA"
                     /locus_tag="RJ239_000729"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HDV7330860.1"
                     /translation="MKAYIYLENDIFLSAKAFGKSGTFFGELVFNTSLTGYQEIISDP
                     SYAGQFIVFSMPEIGIVGTNENDNESKEIFASGVLMRELSSSFSNFRAKESLQDYLEK
                     HGKIGIYELDTRYLVKMIRNNGNLRAVISTEISNKEDLKIALEKSAKIDEVNFVKEVS
                     TKKNYSHKQGVWNASFQKFNDAKRSEKKVAVIDYGVKTNILNELVEVGFEVEVYPYNV
                     KADELITLYKKGEIQGVFLSNGPGEPRILKQEIAEIKKLAEAKIPMLGICLGHQLLSN
                     AFGYETYKMKFGQHGANHPVINLDTKTVEITAQNHNYNVPEELAQVAHITHRNLFGDN
                     VEGVRYKDYPIISVQHHPESSSGPHESKYIFKEFMNLM"
     gene            10657..11316
                     /locus_tag="RJ239_000730"
     CDS             10657..11316
                     /locus_tag="RJ239_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDV7330861.1"
                     /translation="MSIDFLAIISVAFLSSFGHCYSMCGGFNLLFINLNSKSNNLFLL
                     TFIYNLFRIFAYIVLGIIFGTFGNILAINAKVQSLSFFILGIFMMILGFALIFRGNML
                     SFIENNVFFDSFVKKIIKKSKNFKGLKSAIFLGFSNGFVPCGLVYFFIANAMSKQNIF
                     EGILVMMIFGISTLPAMLFFSKISQFFSDFLKNLFNYLSYGVIVCYGINLAYIGFKAF
                     Q"
     gene            11313..12524
                     /locus_tag="RJ239_000731"
     CDS             11313..12524
                     /locus_tag="RJ239_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HDV7330862.1"
                     /translation="MKDFFKDQFFKALEKNTIFSRADVQGNLIFVSDKLCQISGYSKK
                     ELIGKKHSIFKHPDVEECYIEELLKKLSYKKPYQVIFKNIDKLGKTFYLETLLIPILD
                     KNNELIEIVAFSHDVSNSFKLNEELALNHAKLRELSINLENTVKNHQQEFIQLGKKFE
                     KKMQIALEKNEKDIKIAYEEILKSSLEQMISDIAHQWRQPLNELGIAMFQMKQNLKDE
                     KGFAEIYSQSKDMIKNMSETIDVFRTLFNKGVEQCVFIKETLNKALEIAFETIEKNHV
                     NINIVSKSDYEVLAYENGLIRVFLNLILNSIEAFKNKKRKIITINFSKFGKNYLKITI
                     KDNAGGIDKENLDKIFQPYFTTKHPSQGIGVGLYISRQIIESFQGKIKVKNGKDGACF
                     EIFLKLKERVE"
     gene            12527..13207
                     /locus_tag="RJ239_000732"
     CDS             12527..13207
                     /locus_tag="RJ239_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDV7330863.1"
                     /translation="MSQECKELIILVVEDEVKARESMINILSERFSKVIGAQNGDEGL
                     KKFKKFKPDLVITDIAMPIMDGLDMAREIKEISDDVPIVVLSAYSEKERLLRSIDIGI
                     DKYLIKPVDIEELFKVLDYLIGEKIEANMLVKISEEYQFNKTKRTLIYSGGEIVLTKK
                     ELAFISLLLKQPGALVLHEDIKKNVWIGEHVSDTAVRTFIKRVRDKVGEDFIKNVPSL
                     GYKININK"
     gene            13333..14799
                     /gene="ccoN"
                     /locus_tag="RJ239_000733"
     CDS             13333..14799
                     /gene="ccoN"
                     /locus_tag="RJ239_000733"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HDV7330864.1"
                     /translation="MHPGNVLNYDYTVARYFMFATILFGIVGMAIGTLIAFQMAYPNL
                     NYLAGEYATFSRLRPLHTSGVIFGFMLSGIWATWYYIGQRVLKVSMAESRFLMAVGKL
                     HFWLYMLTMVLAVISLFMGVTTSKEYAELEWPLDILVVLVWVLWGVSIFGLIGIRREK
                     TLYISLWYYIATFLGIAMLYLFNNMEVPTYFVTGMGKWWHSVSMYAGTNDALVQWWYG
                     HNAVAFVFTVGIIAQIYYFLPKESGQPIFSYKLSLFAFWGLMFVYLWAGGHHLIYSTV
                     PDWMQTMGSVFSVVLILPSWGSAINILLTMKGEWSQLRESPLIKFMILASTFYMFSTL
                     EGPILSIKSVNALAHFTDWIPGHVHDGTLGWVGFMTMAALYHMTPRVFKRELYSKSLM
                     EAQFWIQTTGIVLYFASMWIAGITQGMMWRATDEYGNLLYSFIDTVVAIVPYYWIRAI
                     GGLLYLIGFFMFTYNIYKTIACGRVLDKEPKSASPMAA"
     gene            14812..15477
                     /gene="ccoO"
                     /locus_tag="RJ239_000734"
     CDS             14812..15477
                     /gene="ccoO"
                     /locus_tag="RJ239_000734"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HDV7330865.1"
                     /translation="MFSWLEKNPFFFAVAVFVVIAYAGIVEVLPNFAENARPIEGKKP
                     YTVLQLAGRAVYIKDSCNACHSQLIRPFKSETDRYGMYSVSGEFAYDRPFLWGSKRTG
                     PDLARVGNYRTADWHENHMWDPTSVVPDSIMPSYKHMFKNNADIETAYAEALTVKKVF
                     NVPYDAENGTKLGSWEDAQAEVKAEAQAIVDQMKNQEVKDAFAKGEIKEIVALIAYLN
                     SLK"
     gene            15482..15745
                     /locus_tag="RJ239_000735"
     CDS             15482..15745
                     /locus_tag="RJ239_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase, cbb3-type, CcoQ subunit"
                     /protein_id="HDV7330866.1"
                     /translation="MEHLSIVFDVIKNLITFDLATVQKHEWEIFQGYGFFALVMFLSI
                     VLYAYWYHLYRTEKKGERNYENYANLALKDDIDDSVLESKRSA"
     gene            15745..16608
                     /locus_tag="RJ239_000736"
     CDS             15745..16608
                     /locus_tag="RJ239_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDV7330867.1"
                     /translation="MQWLNLEDNVNLLSLIGAILIILITLVIVGRMFKQMKEKKGESE
                     LSEHSWDGIGEYKNAVPTGWAVVFFLTIVWAIWYFLWGYPLNSFSSIGQYNEEVATHN
                     TKFEEKFKNLSPEDKIAMGQNIFLVQCSACHGITGDGINGKAQNLNIWGSEEGIINVI
                     KHGSKGMNFPGGEMLGAADLGVAEEDIPAIAAYVAKDLSAIKKTANENLVAKGKEAYA
                     TCAACHGEDGKGQDGMFPDLTKYGSAAFVVDVLHSGKAGFIGTMPSFPTLNDIQKEAV
                     GEYVISLSRGE"
     gene            16605..16826
                     /locus_tag="RJ239_000737"
     CDS             16605..16826
                     /locus_tag="RJ239_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4006 family protein"
                     /protein_id="HDV7330868.1"
                     /translation="MMENNNRCVFSLSGVTGMLIATVLLLVILAVLTIWGLKAQQEVM
                     QKPYSLKDVQSVKMFGSKEQDHRSIKEAQ"
     gene            16823..16924
                     /locus_tag="RJ239_000738"
     CDS             16823..16924
                     /locus_tag="RJ239_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330869.1"
                     /translation="MSKALEYLIVIGLVAAAAITAWSVLTVNHLHIG"
     gene            16921..17523
                     /locus_tag="RJ239_000739"
     CDS             16921..17523
                     /locus_tag="RJ239_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330870.1"
                     /translation="MKKILQDGFFLAIFFFVLLPSRVFALDAVLFNENILSQKVSNEI
                     NLIGKELYQKSNIFIGVMVGDKTEIETLLNKQKELPQSYILLLLSKNSHKVDIVGSKG
                     ALALIDKEAVLSPYPGTGSILPILATNKGDIYNAAILNGYADIVDRVAKSLGLQLEHS
                     IGNANRDTINILRILIYGFICFALLYYAQRRIKRKKNVRN"
     gene            17510..18031
                     /locus_tag="RJ239_000740"
     CDS             17510..18031
                     /locus_tag="RJ239_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7330871.1"
                     /translation="MLETKKSFWPYGILLSLLAIIIACIVTIFIASHHPVYEDDFYFD
                     SYQNVENNYNQIQKQQVNFDKFFKVNFQNDKITFIGKRKIPSYEVDQNSYVANFKISA
                     LQNINSNDLKVQVLLTRPFTKNFDQKLEGQVKNGILSIALPKLDKGRWELKLKFYANQ
                     ETVGFFSYELNAQ"
     gene            18028..20394
                     /locus_tag="RJ239_000741"
     CDS             18028..20394
                     /locus_tag="RJ239_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HDV7330872.1"
                     /translation="MKLRIFSSSRQIREYYNQKKQQNALLDSAIHIGEFLDKVCLSNF
                     HKASSYESLLLMQEACLKSKDLEKKLGISVEFFAFLKNNEYLFSFFKELSLEKKSIED
                     LKNNDYYATYNEHLEILDEVYKNYLTLLEKNSFYDDLSLPKNYTLNKDFLDEYEAIVY
                     DLQGFLSKFEENLLNEISQIKEVVLSFKTSKFNLEYLLKLDFLKIFDLKINTHYEINL
                     SKQEILKEEIFKTKNSKMKLKSFELRALQCAFVMDEISHFVRKGLKPENIAVITPDES
                     FCEFLRLFDKDNMLNFASGISIKESLFYQKFQALYESASSASFIYKNQEDYFEDTQMI
                     FDYHNTLLHSLKLDFIEFKKYFDEKCDFEYFEKLLALFLENEKQELIYLIRKELYFIK
                     DLLKNQSLTLKELIHLFFMQISQLSLSDVGGGKVTVMGLLESRGLCFDGVILVDFNEE
                     FIPKRSVNELFLNNEVRKKAGLISYDRRENLQRFYYESLMKNALEVSICFVENEEKSK
                     SRFLDELDFDFFYETHIHQKAYLNALKLDYEGIKPNLTPIKAPILKHNPFEFPLSFSR
                     FNLLENQKRTYYYRYILNLAEPRVLSEESKAKNQGNFIHKMLEIYYKNYANNNFDIKV
                     FANLLDKEYQKYNISELDLEVFKLKFIQFAKNEKEHFSKGFYVAHTELELNNILKLGT
                     DSIKLKGTIDRIDSSKEGNLIIDYKSGKVPSNSYQLAFYQALYDENASVGFYDLNSMQ
                     ILHQKAKSLDELRERLKDLVLMSKEEIEFENEQDEYCPYKLIYKKELK"
     gene            20391..>23118
                     /locus_tag="RJ239_000742"
     CDS             20391..>23118
                     /locus_tag="RJ239_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RecB-like helicase"
                     /protein_id="HDV7330873.1"
                     /translation="MSQFEPFLALEASAGSGKTFALSVRFVALILKGARINEILALTF
                     TKKAANEMQKRIIETFLNLEKENKTSECNELCKLLGKDKEELISLRDAKKEEFLRTEL
                     KISTFDAFFGKILRVFALNLGLSSDFTMSEERLDVREIFLKLLKKDELKDLAYYINLV
                     DEKENFFNELEKFYENAYFQNRPKILNPTKAYINKAYSELRSYCLGLTHVKNYKNLCD
                     NFKSEVLDLSVFMQSSFMTKFESTKYLQDLESTNLHFSAKRMELINALNTYAIELENY
                     KIANLMNLLNHYSEAKNIFHKDKNTLNFQDVSKKVYELITSEFKDMIYFRLDGFISHL
                     LIDEFQDTSVIQYQILRPLIAELVSGEGVKKNRTFFYVGDKKQSIYRFRKGKKELFDL
                     LKQEFSQIKSDNLNTNYRSKELLVDFVNETFKEKIKDYKEQFALESKKGGFVRIVESK
                     EQKVKNQAQEIKEKTLETLFEQINFLRSKNISYDDICILCWKNSDADMVLDFLREQNI
                     PAFTQSNVLLENKASVRLVLEYAKYCIFGDEFYLVFLKELLGFEPRKITLDFSKNAME
                     NVLFLIKELKLDLNDIALIQFIEYAKTKENFLKLLFEPCALKIVSEQNMGISIMSVHK
                     SKGLEFDHVILLDSLSKNNSNNEDIMLEYDINQGWQLHIKDKIRELTKEPIYTLFKEN
                     ITRANYEDDINKLYVAFTRAKESLIIIKRNEESVNGNYPSYFKGGFLNIHSQERGFLE
                     SKEQILSVKKESIQTLQKFEKITLQEIQSEERLDSKELYFGNAFHFFMQNLKLPKGEN
                     FQILTQRCKSKFRHFLDESDFEKLFKRIEILLKNIQFQNLIGDGKLLKEQALSFNGEI
                     KQLDLLALKDEEAFIIDYKTGLAMQDKHKEQVGTYKIAISEILQKDKVRAFIV"
BASE COUNT         8328 a         2674 c         4221 g         7895 t
ORIGIN      
        1 tcttaggaga tacgaaatga tacaaaaagc tttagcctta gctgaagaat tacaaggaca
       61 aatagaagcc aatatttcaa attctgaaaa agaatttcat gctaaaatgc aaaaacttct
      121 taataatccc aaaaataaag ttatgcttat agagctttta gatcgttctt ttagatgtaa
      181 agataaaaat gcaagttttg agcttataga atatactttg agtaaatatg gcatagcgga
      241 tttttttagc acttttgaaa aattcctact ttttagcttt ttaaattttg gcaaatttgc
      301 tcctaattta agtgtacctt tttttgtcaa acatttaaga gaagatacta aagctatggt
      361 tctagatgca aatcctagtg ttttagaacc acatattaag aaaagaaaag agcaagataa
      421 aattacctta aatgtgaatt taatcggcga agaggtttta ggtgaagctg agagtaaata
      481 tcgtatgcaa aaatacgaag aagccttaaa atcaagctat atcacttata tttccataaa
      541 aattactact attttttcac aaattaatat tatagatttt aattattcta aagaagaggt
      601 cgtaaaaaga ctagattatc tttatgcttt agccttagaa gaagagaaaa aacaaggtgt
      661 atctaaattt atcaatcttg atatggaaga atttagggat ttagagctca ccgttgcagc
      721 ttttatggaa agtgtggcta aatttgatat taaagcaggg attgttttgc aagcttatat
      781 tcctgattct tataagtatc ttaaaaaact ttttgctttt tcaaaagaga gggttttaaa
      841 aggtatgaag cctattaaga tccgttttgt taagggtgct aatatggaaa gtgaagaaac
      901 cattgcgtct caaaggggtt gggagcttcc tactttttac aaaaaaatag atactgatag
      961 taattataat aaaatgcttg attttattct tgaaggagat aattataaat acatcaacat
     1021 aggaattgca agtcataata tctttgagat tgcttatgct tatacacgca taagtgaagt
     1081 gggtgctttg gattctttta cttttgaaat gcttgaaggt atgagtttgc aatgttctta
     1141 tgaattatct aaaatgcatg atctaatcct ttatgcccca gtttgcgatg aagcacattt
     1201 taacaatgcc attgcttatc ttgtaagacg ccttgatgaa aatacaagtg aagataattt
     1261 tatgcgttat tttttcaatc ttaaagtagg agataagaac tggaatatcc aaaaagaact
     1321 ttttttaaaa tctttagaag gcataaaaac tcttgataat actacacatc gtaagcaaga
     1381 tagaaataaa gaatcaaata tcataagttc ttatgaaggt aaaaaattta gcaatgaaag
     1441 cgatacggat tttattttag cacaaaatag agtgtgggct aaagaaatta aaactaaata
     1501 tgaaaattta aaagattatg atgtttatcc tgttataggc gaacttgatt ttaaagcaga
     1561 aaatttaaat gttttagaag ttaaagataa gatcgaagat agagttatag gaaaggctta
     1621 tttagcagga gaaaaagaaa tcaaacaagc tttagaagta gctaaaaatt ccaaatttac
     1681 acaaaaaagt catgatgaaa tttatcaaat tttagccaaa agtgcaaaac tgatgagaga
     1741 aagaagaggg gatttgatag gtttggcagc tttagaagtg ggcaaaacct ttttagagat
     1801 cgatcctgaa gtaagcgagg ctattgattt tatagagttt tatccgcact ctttagaaga
     1861 gcttaaaaaa caaaatccaa aagttacatt cacacctaaa ggtatagggg ttaccatagc
     1921 tccttggaat tttcctatag gaatttcagt aggtactata gctgcaccac tagccgcagg
     1981 taatgtggtg atttacaaac cttcttcact ttcaactcta acaggttata tgctttgtaa
     2041 gtgtttttgg gattcgggta ttccaaaaga tgctttgatt ttcttacctt caaaaggaag
     2101 tgatatttct aaatatttac ttattgatga agcgattaaa ttttcaattc ttacaggagg
     2161 agaggatact gcttatgcca tgttaaaagc taatccaacc ttgcttttaa gtgctgaaac
     2221 tggcggaaag aatgcgacta tagtttctaa atttgctgat cgtgatagtg cgattaaaaa
     2281 tatcattcat tctgctttta gcaatagcgg tcaaaaatgt tcagctactt ctttgctagt
     2341 cttagaagaa gaggtttatc atgatgaaga atttaaaaag actttagtgg atgctgcgag
     2401 ttctatggca gtgggcaatc cttttgaatt taaaaataaa ttaggtactt tagctgataa
     2461 gccaagttct aaagttcaaa aggccttaga tgaattacaa ccttatgaag aatgggcatt
     2521 aaaacctaag tttttagagg ataatcctta tttgatgact ccaggcataa aatatggcac
     2581 taaaaagggt gattttactc atatgaatga actttttgta ccgattttaa gtgtgatgaa
     2641 ggctaaagac ttaaaagaag ctattgatat agtaaattcc acaggttatg gtttaactgc
     2701 aggttttgaa agcttagatg aaagagaatg ggagtatttt cacactcaca tagaagcagg
     2761 aaatatttat atcaataaac caaccacagg ggctatagtg ctgcgtcaac cttttggtgg
     2821 gattaaaaaa tcagctatag gtttgggtag aaaagtggga atttataatt atatcactca
     2881 atttttagag attaagcaag aagattttga tgatcattta attgaagata aattttcaaa
     2941 aaaattagca caaatagatt taaaagaagc acaagatttt ataaacaatt taattaaaat
     3001 gtctcaatct tatgcttatc attataaaaa cgagtttagt gtttcaaaag attatgtcaa
     3061 tattcgtgga gaagataatc ttttttctta tactaaaata aagaatatgg ttttaagact
     3121 ttgtggaaat gaaagcttaa aagatgtttt aggtgtggtt ttaggtgcaa atattgcaaa
     3181 tattgatcta agtatcagtt atgatgaaca agatgttagt atgatagaac gaattgttca
     3241 aagcatagga gcaaaagtat tgtttttaaa agaaaataaa gaaaatttta tcaagagtat
     3301 taaagaatat gaaagagtgc gttatttagc aaagccagat gtaaatgatg agatttataa
     3361 agaggctgca aagcttgcta aaatcattat aagagaaaag ccattattaa atggtcgttt
     3421 tgaactttta aattatttta atgaaaaagc tttaagtata tcttttcatc gttatggaaa
     3481 tttaggcatt agagcaatat cttaatgatc aaggagagat tgatggaagt ggttcaaatt
     3541 aataccccaa tagcagtgat gtttgtagtg tatgccttat taatgcttta tataggtttt
     3601 tatttttata agcaaaataa aaattcagag gattattttc taggtgggcg tactatgggg
     3661 cctgtgatat ctgcacttag cgcaggggct tctgatatga gtggttggct tttaatgggt
     3721 ttaccaggag ctttatatgt aagtggtttt atagattctt atattgcaat tgggcttact
     3781 ataggagcta gtttaaattg gatttttgtg gcaaaaagac ttagaattta taccagtgtg
     3841 attgcaaatt ctttgactat tcctgattat tttgaaactc gttttgatga tgataaacat
     3901 atactgcgca ttgtatgtgc ggtggtaatt ttgatatttt ttacctttta tgtttcatca
     3961 gggcttgtaa gcggagcaaa actttttgaa agtacttttg gtatcagata cgattatgct
     4021 ttaactactg gaacgattat tattgttgct tatacttttt taggtggata taaggcggtt
     4081 tgttggacgg atatgataca agggctttta atgatgatgg ctttaattat tgtacctttg
     4141 gttatgcttt atcatttagg tggttttggt gaagcgatga atatagtaag agaaataaag
     4201 ccacaagctt tatctatggg cgaaggagta ggaattgtaa gcattatatc tgcacttgct
     4261 tggggtttgg gttattttgg tcaaccacat attttagtgc gttttatgtc gattcgttct
     4321 actaaagata ttcctatggc cacttttata ggtattgctt ggatggcggt ttgtctttta
     4381 agtgcttgta tgataggtat tttaggtata gcttatgtgc ataaatttga attaagtttg
     4441 caagatcctg aaaagatttt catcgtgatg tcgcagcttt tatttaatcc ttggatagca
     4501 ggtattttac tcagtgctat tttagcggct attatgagta cggcaagttc acaattgctg
     4561 gtttcaagtt ctactatagc ggaagatttt tataaaaaga tttttagaga agatgcacca
     4621 agtcatattg tattaaattt aggtaaatta ggtgttttat tggtagctgt aatagcgttt
     4681 ttgatttcta ctgataaaaa ctcaagtgtt ttgagtatag tttcttatgc atgggctgga
     4741 tttggagctt cttttggttc tgtaatgctt ttttctttat tttggagtag gatgacaaga
     4801 gtaggagcga tcttaggtat gataacagga gctgctactg tggtgctttg gaagaatttt
     4861 gcaaattcag gtctttatga aatagttcca gggtttttag tagcttcggt ggtgattatt
     4921 attgcaagtt tgtttacaaa tgtaagatct ggaactaagg cagcttatga aaagatgtta
     4981 aaagagcttt gagaataaaa gcctttttta aggcttttgg attaaaaatc ttagtgtggg
     5041 tccactttga tcgatttcaa gcactttaaa accacggttt tttgcatctt gaggtatgga
     5101 attgatactt tgtggacaat cacaaagtac ttctaaaatt tctccacttt taagcttagg
     5161 taagacatca agtgttgcta tagcaggata aggacaagct tcaccttgta aatttaaact
     5221 ataagtaatt ttcactgttt atcctttaag ttgattttta aaaaagtgtt ttttgtaaaa
     5281 tactacaaaa acaaacatta agatgaataa aataaggttg ataaaaaatc catttaaatt
     5341 gccaaattca gttaaaagat tgatttttat accttcttta aaagcttttg gtaaaaagtt
     5401 ataacttaaa gctaaaatca tagttcctat tatatttgca attcctacta ttataaaatg
     5461 actttgtcct tcaaaggcac gataagtcca accacactcg caacctccgg caaaaactat
     5521 accaaaacca aacaaaaatg ctcccacagc tacagcagga gaaagttcta tgagtttgct
     5581 agtatgacct tgcaagataa aagcaaaagc gattaaagag gcgataatca taccgattaa
     5641 tgcgcctttt atagcattat ctctaccaaa taaaaataaa tctctaaagc aagaagtaaa
     5701 acaaatttgc cctctagaaa taacaaagcc aaaaacaaaa ccaaaaatca gtgctaaagc
     5761 tagaagactt tgtttgtttt gtgtgctgat attgccattt gtaaaaacaa gataaaacac
     5821 ccaaactaaa aaggctatga aaagcaatat gcctaagtta aaatataatt ttgtacgcaa
     5881 actttgcttg tttaacggca agttttcttt atttacacgt tctaatttag ctttaggttt
     5941 aaaaaaggaa gtgttgcaaa ttttcactcc tagataaatt cctaaaacca taaaaacagt
     6001 aaaaagccaa gtgtgtaaag aaaaataagg taaacctgta aaaaaattag ctaaattgca
     6061 tccaaatgca agtcttgctc catatcctga aagaattcca cctactattg cttgaaaaat
     6121 tcttatattg ctagcaggta gacgaaattt gactttgtta gctaaaagtg cggctactaa
     6181 acaacctata aacataccta tgagcataat accatcagtt cttgttaaag gggttccatt
     6241 taaattttgc ttttggtaat aagaatatcc atctaaattc atacctaaaa gctctaaaaa
     6301 ctcgccaccc caacgtgtca tttctccagt aacagcccaa acgccaccaa aaatcccaaa
     6361 atacactgca cttaaaattc caagtgcaat catagaacgg gaattgtccc aaaaattgat
     6421 taaatatttt tgtttaaaag aattcaaaga aagatcctaa aaatgtaatc atcaaaactt
     6481 gatgctaaaa aagagtgaga ttatagctta aatttaatat gaagtcaaaa agaatattga
     6541 taaatttatt ttgtttttca ttaaaaatcg ctataattat cactttggaa gattagcgta
     6601 tctggtgatc gccactgact tcaaatcaga tgaaaggata gttgactatt ctttggggag
     6661 ttcgattctc tcatcttctc gccaatatta agtaaaatca aggaaatttt tatgagcaaa
     6721 gcagatatta ttgtcggcat tcaatggggc gatgaaggaa aaggtaaggt agttgataaa
     6781 ttatgtgaaa attatgattt tgtttgcaga agtgcaggtg gacacaatgc aggacatacg
     6841 atttgggtaa atggtgtaag atatgcgctt catcttatgc caagtggagt tttgcatcca
     6901 agatgtatta atattatcgg aaatggagtt gtggtttctc ctgaagtatt gattgctgaa
     6961 atggctcaat ttgaaaattt aaaaggtaga ttatatatca gcgatagagc tcatttaaat
     7021 ttaaaacatc attctttaat agacattgca aaagaaaagc tcaaaggcaa aaatgccata
     7081 ggaacaacag gtaagggtat aggaccttct tatgcagata agattaatcg tacaggacat
     7141 agagttggag agcttttaga accacaaaga ctttgcgagg ctttgataaa agattttgaa
     7201 gctaataaaa ctttttttga aatgcttgaa attgaaattc caagtgctga agaattgctt
     7261 gctgatttaa aacgttttaa tgaaatttta actccttata ttacagatac tacaagaatg
     7321 ctttggaagg ctttagatga agataaaaga gtacttttag aaggagctca gggttctatg
     7381 cttgatattg atcatggaac ttatccttat gttacaagtt caagtactat ttcagcaggc
     7441 actttaacag gacttgggtt aaatcctaaa gaagcgggaa atattatagg tattgtaaaa
     7501 gcttatgcaa cgcgtgtggg aaatggagct tttcctactg aggataaggg cgaagatgga
     7561 gaaaaaattg cgcaaattgg aaaagagatt ggcgtaagca cgggacgcaa aagacgctgt
     7621 ggatggtttg atgcggttgc tgtaagatat acagcaaggc ttaatggtct tgatgcttta
     7681 tctttgatga agcttgatgt tttagatggt tttgaaaaga taaaaatttg tcgtgcttat
     7741 gaatataagg gtatggaaat cgactatata ccaagtgatt tagaaaatgt tcaacctatt
     7801 tatgaagaaa tggatggttg ggataaagtt tttggtataa aagattatga tttattgcca
     7861 gaaaatgcta aaaaatatat agcaagactt gaagagcttg caggggttaa ggtaaagtat
     7921 atttctacta gccctgaaag agatgatact atcatcttat gaaaagtaaa tataattctg
     7981 ttgtaaaggt aagaaaacaa caacttgata aagcagaatc aaatcttaat caagccaaac
     8041 aaagacagct tgaacatgaa aaagcttatg aactttcacg ccaagagtgt gaaagtttag
     8101 gcgtattgcc aaaatcagga tctatagcag agttaagatc gaatttaagt atggcacaag
     8161 taggacgcga ggctttggca agagctaagg agaaagtaga actttctaaa aaagaaatga
     8221 atcattatca gtttttatat caaaaagcac atttagatta tgaaaaaatg aaggttttag
     8281 aagccgagga aattaaacaa aagcaaaaag aacttgccaa ggctgaagaa aaatttttag
     8341 atgaaattgc aatcagtcgt tttttcaaag gagaaaaaga tgattaaaaa atttatattg
     8401 ttagttttta tttcaagtgt agtttttgga gctgaacaag attgtgagca gtattttgaa
     8461 gctagaaaag ctcaaattga attgcaaact agagaatttg atgaagcaag acaatcttta
     8521 gaagcttata aagcctcttt tgaagctttg caaaaagaaa ggcttgaaaa tttagaaaaa
     8581 aaagaggctg aggttaatgc aactttggca aaaattgaag aattaaagct tgaaaacgca
     8641 aggcttgtag aagaacaaca aaagatttta aattcaatca atgataaaac acaaggtagg
     8701 gttaaagaaa tttattccca aatgaaagat gcagccattg cagatgtttt aagtcaaatg
     8761 gatgcagagg atgcaagcaa aataatgctt tctttggaat cgcgtaaaat ttcaggtgtt
     8821 ttatctaaaa tggatccaaa aaaagctagc gagcttactt tgcttttgaa aaatttagat
     8881 aataatgcta gtaattaggt gattaaaata atgaaaattt ttcattttta acattctttt
     8941 accaaaaata agctattatt tcaaacatta tcaaataaaa ggtttttaag atgcgtataa
     9001 aattaccaca tattccttat atcgcaaata aaatgatgct agatatagct aattcttctt
     9061 ttgtagaaat taaagatcaa ttagaaaagc ttaaggtatg tataatagaa gttttagaga
     9121 aagatattct aaatgaaaga aaattagatg aaagagtaaa agagctttta gagcaacaag
     9181 aagatgaaat ggagcttatg caagtagatc gtaaaaatat gttttggctt gtgaagaaaa
     9241 agttagctcc tgaatttaat gtgattttag attctgaaga tagacataat catctagcgc
     9301 atcaaatttt agaagaactt gtagagaatg attatattaa ttttatagtg agtgaaaata
     9361 gagttaaaaa tttaatcttt tcaagcatag agtcttatct taaaatttat gaaaaacttg
     9421 aagatgaggt ttatgagaaa attagcaatt ataaaacaaa acctattcca ggtagcgaag
     9481 aatacgatct tatctttgaa aaactctatc aagaagagct tagaaaaaaa ggtatgtttt
     9541 aatgaaggct tatatttatt tagaaaatga tattttttta agtgctaagg cttttggaaa
     9601 gagcggtact ttttttggag agcttgtatt taacacttct ttaacagggt atcaagaaat
     9661 tatttcagat ccttcttatg cagggcaatt tatcgtattt tccatgccag aaattggtat
     9721 agtgggaacc aatgaaaatg ataatgaaag caaggaaatt tttgcaagtg gtgttttaat
     9781 gcgtgaatta agttccagtt tttcaaattt tcgcgctaaa gaaagtctgc aagattatct
     9841 tgaaaaacat ggaaaaatag gaatttatga acttgatacg agatatctag taaaaatgat
     9901 aagaaataat ggcaatttaa gagctgtaat ttcaactgaa atttcaaata aagaagattt
     9961 aaaaatcgcc ttagaaaaat cagcaaaaat tgatgaagta aattttgtaa aagaagttag
    10021 cactaagaaa aattattctc ataaacaagg cgtttggaac gctagttttc aaaaatttaa
    10081 tgatgctaaa agaagtgaga aaaaagttgc tgttatagat tatggtgtta aaacaaatat
    10141 cttaaatgaa cttgtagaag taggttttga agtagaagtt tatccatata atgttaaagc
    10201 agatgagttg attactctgt ataaaaaagg tgaaattcaa ggcgtgtttc tttctaatgg
    10261 tccaggtgag ccaaggattt taaaacaaga gattgcagag attaaaaaac ttgcagaagc
    10321 taaaattcct atgcttggaa tttgcttagg tcaccagctt ttaagtaatg cttttggata
    10381 tgaaacttat aaaatgaaat ttggacaaca tggagcaaat catcctgtga tcaatcttga
    10441 tacaaaaacg gtagaaatta ccgcacaaaa tcataattat aatgttccag aagaattagc
    10501 tcaagtggct catatcactc atagaaattt atttggcgat aatgttgaag gagtaagata
    10561 taaagactat cctattattt cagtgcaaca tcatccagaa agttcttcag gtcctcatga
    10621 aagtaagtat atttttaaag aatttatgaa tttgatgtga gtatagattt tttagctatt
    10681 atcagcgttg cttttttatc tagttttgga cactgctatt ctatgtgtgg tggttttaat
    10741 ttacttttta taaatttgaa ttcaaaaagc aataatttat ttttattaac ttttatttat
    10801 aatttgttta gaatttttgc ttatattgtt ttagggataa tttttgggac ttttgggaat
    10861 atcttggcaa tcaatgccaa ggttcaaagt ttgtcatttt ttattcttgg tatatttatg
    10921 atgattttgg gttttgctct tatttttaga ggtaatatgt tatcttttat tgaaaataat
    10981 gttttttttg atagttttgt aaagaaaatt attaaaaaat ctaaaaattt taaaggatta
    11041 aaatcagcca tatttttagg attttcaaat ggttttgttc cttgtggatt ggtgtatttt
    11101 tttatagcca atgcaatgag taagcaaaat atttttgaag gtattttggt aatgatgatt
    11161 tttggaatat caactttacc tgcgatgtta tttttttcta aaatttcaca gttttttagt
    11221 gattttttga aaaatttatt taattattta tcgtatggcg ttattgtttg ttacggtata
    11281 aatcttgcct atataggttt taaggctttt caatgaaaga tttttttaaa gatcagtttt
    11341 ttaaagctct tgaaaaaaat acaatttttt caagagctga tgttcaagga aatttaattt
    11401 ttgtcagtga taagctttgt caaataagtg gatatagtaa aaaagagctt ataggaaaaa
    11461 aacattcaat atttaaacat ccagatgttg aggaatgtta tattgaagaa cttttaaaaa
    11521 aactttcata taaaaaacct tatcaagtta tttttaaaaa tattgataaa ttaggcaaaa
    11581 ctttctatct tgaaacttta ttaatcccca tattggataa aaataatgaa ttaatagaaa
    11641 tagtagcatt ctctcatgat gttagtaatt cttttaagct taatgaagag cttgctctaa
    11701 atcacgctaa attaagagaa ttaagtatta atcttgaaaa tacagttaaa aatcaccaac
    11761 aagaatttat acagttaggt aaaaaatttg agaaaaaaat gcaaattgcc ttggaaaaaa
    11821 atgaaaaaga tattaaaata gcatatgaag agattttgaa atcttcatta gaacaaatga
    11881 ttagcgatat agcacatcaa tggagacaac cgttaaatga gctcggtatt gccatgtttc
    11941 aaatgaagca aaatcttaaa gatgaaaaag gatttgctga aatttactca caatcaaaag
    12001 atatgattaa aaatatgtca gaaacaattg atgtgtttag aactttgttt aacaaaggag
    12061 tagagcagtg tgtatttata aaagagactt taaataaagc cttggaaatt gcttttgaaa
    12121 ctatagaaaa aaatcatgta aatattaata ttgtttcgaa aagtgattat gaagttttgg
    12181 catatgagaa tggtttaata agagtttttc ttaatttgat tttaaattca atagaagcat
    12241 ttaaaaacaa aaaaaggaaa atcataacaa taaatttttc aaaatttgga aaaaattatc
    12301 tgaaaattac aataaaagat aatgctggtg ggattgataa agaaaattta gataaaattt
    12361 ttcaacctta ttttacaaca aaacatccta gtcaaggtat aggagtagga ctttatataa
    12421 gtagacaaat tatcgaaagt ttccaaggaa aaataaaagt taaaaatgga aaagacgggg
    12481 cttgttttga gatattttta aaactaaaag agagggtaga gtagaaatgt cacaagaatg
    12541 taaagaattg ataatattag tagttgaaga tgaggttaag gctagagaat caatgattaa
    12601 tatattaagc gaacgcttta gtaaagtaat cggagctcaa aatggagatg aggggcttaa
    12661 aaaatttaaa aaatttaagc cagatttagt tatcacagat attgctatgc ctattatgga
    12721 tggactggat atggcaagag agattaaaga aatttcagat gatgtcccaa ttgttgttct
    12781 tagtgcgtat tcagagaaag agagactttt gcgttctatt gatattggta tagataaata
    12841 tttgattaaa cctgttgata tagaagagtt gtttaaagtt ttagattatc tgataggtga
    12901 aaaaattgaa gcaaatatgc ttgtaaaaat ttctgaagaa tatcaattta acaaaactaa
    12961 acgaacttta atttacagtg gtggagaaat tgttttaact aaaaaagaat tggcttttat
    13021 ttctttgctt ttaaagcaac ctggagcttt ggttttgcat gaagatatta agaaaaatgt
    13081 ttggataggt gaacatgtga gcgatactgc tgttagaact tttataaaaa gagtaagaga
    13141 taaagtgggt gaagatttta taaaaaatgt gccaagttta ggttataaga taaatatcaa
    13201 taaataagac tgatttagcc ttaaaatata aaacataaca aatgattaac aaaattatca
    13261 tttttaagaa aaaatgtata attaatattc tataatattc tcttgttatc aaaaatttta
    13321 aggagaaagt cgatgcatcc aggtaatgta ttaaattacg actatacggt tgcaagatat
    13381 tttatgtttg cgaccatatt gtttggcatt gttggtatgg ctataggaac tcttatagct
    13441 tttcaaatgg catatcctaa tttaaattat ttagcaggag aatatgccac tttttcaaga
    13501 cttagaccac ttcatacttc aggtgtgatt tttggtttta tgctttcagg gatttgggca
    13561 acttggtatt atataggtca gcgtgttctt aaagtgagta tggctgagtc aagattttta
    13621 atggctgttg gtaagcttca tttttggctt tatatgctta ctatggtttt agctgttata
    13681 tctttgttta tgggtgtgac tacatctaaa gaatatgcag agcttgagtg gcctttagat
    13741 attcttgttg ttcttgtttg ggttttatgg ggtgtaagta tttttggact tattggaatt
    13801 cgccgtgaaa aaacccttta tatttctcta tggtattata tagctacatt tttaggtata
    13861 gctatgcttt atctttttaa caacatggaa gtaccaactt attttgttac tggaatgggt
    13921 aaatggtggc atagtgtatc aatgtatgca ggaacaaatg atgctttagt acaatggtgg
    13981 tatggacata atgctgtggc atttgtattt actgtgggta ttattgctca aatttattac
    14041 ttcttgccaa aagaaagtgg tcagccgatt ttctcttata aactctcttt atttgcattt
    14101 tggggcttaa tgtttgttta tctttgggca ggtggtcacc atttgattta ttcaactgta
    14161 cctgattgga tgcaaactat gggttcggtt ttctctgtag tattgatttt accttcttgg
    14221 ggttcagcga ttaatatctt gcttactatg aaaggtgagt ggagtcagct tcgcgagagt
    14281 ccgttgatta aatttatgat tttggcatca actttctata tgttctcaac acttgaaggg
    14341 ccaattcttt caattaaatc tgttaatgct ttagcacact ttacagattg gattccagga
    14401 catgttcatg atggaacatt aggttgggta ggatttatga ctatggctgc gctttatcat
    14461 atgactccta gagttttcaa aagagagctt tatagcaaat ctttaatgga agctcaattt
    14521 tggatccaaa ccacaggtat agttctttat tttgcttcaa tgtggattgc gggtattact
    14581 caaggtatga tgtggagagc gacagatgag tatggtaact tgctttatag ctttattgat
    14641 actgttgtgg ctattgttcc ttattattgg attagagcga ttggtggatt gttgtatctt
    14701 atcggtttct ttatgtttac ttataatatt tacaaaacaa ttgcttgtgg aagagtgctt
    14761 gataaagaac caaaaagcgc ttcgcctatg gcagcataaa aaggagaaaa tatgtttagt
    14821 tggttagaaa aaaatccatt cttttttgct gtagctgttt ttgtagtgat tgcttatgca
    14881 ggcatagttg aagttttacc aaattttgca gaaaatgcaa gaccaattga aggtaaaaaa
    14941 ccttatacgg ttttacaact tgcagggcgt gcagtatata ttaaagatag ttgtaatgct
    15001 tgtcattcac agcttattcg tccatttaaa tcagaaacag atcgttatgg tatgtattct
    15061 gtaagtggtg aatttgctta tgatagacct tttctttggg gctcaaaaag aacaggacct
    15121 gatcttgctc gtgtaggaaa ttatagaacg gctgattggc atgaaaatca tatgtgggat
    15181 cctacttctg ttgttccaga ttctattatg ccttcatata agcatatgtt taaaaataat
    15241 gcagatattg aaactgctta tgctgaggct ttaactgtga aaaaagtttt caatgttcct
    15301 tatgatgcag aaaatggaac aaaacttggt tcttgggagg atgcacaagc tgaagtaaaa
    15361 gctgaagctc aggctatagt tgatcaaatg aaaaatcaag aagtaaaaga tgcttttgct
    15421 aaaggtgaaa tcaaagaaat agttgctttg atcgcttatt taaatagctt aaagtaagat
    15481 gatggaacat ttatcaatag tttttgatgt gattaaaaat ttaatcacat ttgatttagc
    15541 aacagttcaa aaacatgagt gggagatttt ccaaggttat ggtttttttg cactcgtgat
    15601 gtttttgtca atagtattat atgcgtattg gtatcattta tatagaacag aaaaaaaagg
    15661 cgagagaaat tatgaaaatt atgcaaacct tgccttaaaa gatgatattg atgatagtgt
    15721 attagaaagt aaaaggagtg cttaatgcaa tggttaaatt tagaagataa tgttaatctc
    15781 ttatctttaa ttggagctat tcttatcatt ttaatcacac tagttattgt gggtagaatg
    15841 tttaagcaaa tgaaagaaaa aaaaggcgag tcagagctta gtgaacatag ttgggatgga
    15901 ataggagagt ataaaaatgc tgttcctact ggttgggctg tggtattttt cctgactatt
    15961 gtttgggcta tttggtattt tctatgggga tatcctttaa attctttttc aagtataggt
    16021 caatataatg aagaagtagc aactcataat acaaaatttg aagaaaaatt taaaaattta
    16081 tctcctgaag ataaaatagc aatgggtcaa aatatctttt tagttcagtg ttcggcttgt
    16141 catggaatta caggagatgg tatcaatggt aaagctcaaa atttaaatat ttggggtagt
    16201 gaagaaggta taatcaatgt aattaaacat ggttcaaaag gtatgaattt tccaggtgga
    16261 gaaatgcttg gtgctgctga tttaggtgta gcagaagaag atatccctgc tattgctgct
    16321 tatgtagcaa aagatctttc agctattaag aaaactgcaa atgaaaattt agtagcaaaa
    16381 ggtaaagaag cttatgcaac ttgtgcagca tgccatggag aagatggaaa aggtcaagat
    16441 ggaatgttcc cagatcttac aaaatacggt tctgcagctt ttgtagtaga tgttttacat
    16501 agtggtaagg ctggttttat aggaacaatg ccgagttttc caacacttaa tgatattcaa
    16561 aaagaagctg ttggcgagta tgtaatttct ctttcaaggg gtgaatgatg gaaaataata
    16621 atagatgcgt gttttctctt tcaggtgtta caggtatgtt aattgctacg gttttgttgc
    16681 ttgttatctt agcagtttta actatttggg gtcttaaagc tcagcaagaa gtgatgcaaa
    16741 agccatatag tcttaaagat gtacaaagtg taaagatgtt tggttcaaaa gaacaagatc
    16801 atagaagtat aaaggaagca caatgagtaa ggctttggaa tatttaattg ttattggttt
    16861 agttgctgct gctgcaatca ccgcttggtc ggttttgacc gtaaatcatc ttcatatagg
    16921 atgaaaaaaa tattacaaga tggctttttt ttagctatct tcttctttgt tttattgcct
    16981 tctagggttt ttgctcttga tgctgtactt tttaatgaaa atattttaag tcaaaaagta
    17041 agtaacgaga ttaatcttat aggaaaagag ctttaccaaa aaagtaatat ttttatcggc
    17101 gttatggttg gtgataaaac tgaaattgaa actttattaa ataaacaaaa agaacttcct
    17161 caatcttata tattgcttct tttgtcaaaa aattctcaca aagttgatat agtgggctca
    17221 aaaggtgctt tagctttgat tgataaagaa gctgtgctta gtccttatcc tggaacagga
    17281 tctattttgc cgatattagc tacaaataaa ggtgatattt ataatgctgc tatacttaat
    17341 ggttatgcag atattgtaga tcgtgtggca aaatccttgg gattacaatt agaacattct
    17401 ataggtaatg caaatcgtga tactatcaat attttaagaa tacttatcta tggatttatt
    17461 tgctttgcat tgttatacta tgcacaaaga agaataaaga ggaaaaaaaa tgttagaaac
    17521 taaaaaaagt ttttggcctt atggtatttt gctttcactt ttggctataa ttattgcttg
    17581 tattgtaacg atttttatag caagtcacca tcctgtgtat gaggatgatt tttattttga
    17641 ctcttatcaa aatgttgaaa ataattacaa tcaaatacaa aaacaacaag taaattttga
    17701 taaatttttt aaagtaaatt ttcaaaatga taaaatcact tttataggta aaagaaaaat
    17761 tcctagttat gaagtggatc aaaattccta tgttgcaaat tttaaaattt ctgcattaca
    17821 aaatataaat tctaatgatt taaaagttca agttcttctt acaagaccat tcactaaaaa
    17881 ttttgatcaa aagttagaag gacaagttaa aaatggaatt ttaagtatcg ctttacctaa
    17941 attagataaa ggtagatggg agcttaagct aaagttttat gcaaatcaag aaacagtggg
    18001 tttttttagc tacgaattaa atgctcaatg aaattaagaa tttttagctc ttcaaggcaa
    18061 attagagaat attataatca aaaaaaacag caaaatgctt tattagatag tgctattcat
    18121 ataggtgaat ttttagataa agtttgtttg agcaattttc ataaggcaag ttcttatgaa
    18181 agcttacttt taatgcaaga agcttgtcta aaaagtaagg atttagaaaa aaaactagga
    18241 atttcggtag aattttttgc ttttttgaaa aataacgaat atcttttttc ttttttcaaa
    18301 gaacttagtt tagaaaaaaa aagtatagaa gatcttaaaa ataatgatta ttatgctacc
    18361 tataatgaac atttggaaat tttagatgag gtatataaga attatcttac tttgcttgaa
    18421 aagaattctt tttatgatga tctttctttg cctaaaaatt acactcttaa taaagatttt
    18481 ttagatgagt atgaagctat agtttatgat ttgcaaggtt ttttgagtaa atttgaagaa
    18541 aatttattaa atgaaatttc tcagattaaa gaagtggttt taagttttaa aacaagtaaa
    18601 tttaatcttg aatatctttt aaaacttgat tttttaaaaa tatttgattt aaaaataaac
    18661 actcattatg aaatcaatct ttcaaaacaa gagatcttaa aagaagaaat ttttaaaaca
    18721 aaaaattcaa aaatgaaact caaatctttt gaattaaggg ctttgcaatg tgcttttgtt
    18781 atggatgaaa tttcacattt tgtacgcaaa ggtttaaagc ctgaaaatat tgcagttata
    18841 actccagatg aaagtttttg tgagttttta agactttttg ataaagacaa tatgcttaac
    18901 tttgcaagtg gaattagtat taaagagagt ttgttttatc aaaaatttca agcactttat
    18961 gaaagtgcta gtagtgcttc ttttatttat aaaaatcaag aggattattt tgaagacacg
    19021 cagatgattt ttgattatca caatacgctt ttacattctt taaaacttga ttttatagag
    19081 tttaaaaagt attttgatga gaaatgtgat tttgaatatt ttgaaaaatt acttgctttg
    19141 tttttagaaa atgaaaagca agagcttatt tatttgatac gaaaagaact ttattttatt
    19201 aaagatttat tgaaaaatca gtctttaact cttaaagagt tgatccatct ttttttcatg
    19261 caaatttcac aactttccct tagtgatgta ggtggaggta aggttacggt aatgggactt
    19321 ttagaaagtc gtgggctttg ttttgatgga gtgattttgg ttgattttaa tgaagaattt
    19381 attcctaaaa gaagtgttaa tgagcttttt ttaaacaatg aagtgcgtaa aaaagcagga
    19441 ttgattagct atgatagaag agaaaattta caaagatttt attatgaaag cttgatgaag
    19501 aatgctttag aagtaagtat ttgctttgtg gaaaatgaag aaaaaagcaa atcacgtttt
    19561 ttagatgaac ttgattttga ctttttttat gaaactcata tccaccaaaa agcttatctt
    19621 aatgctttaa aattagacta tgaaggcata aaacctaatc taactcctat aaaagctcct
    19681 attttaaagc ataatccttt cgagtttccg ctttctttta gtcgttttaa tttattggaa
    19741 aatcaaaaaa gaacttatta ttatcgttat attttaaatt tagcagaacc tagggtttta
    19801 agcgaggaaa gcaaagcgaa aaatcaagga aattttatcc ataaaatgct tgaaatttat
    19861 tataaaaatt atgcaaataa taattttgat ataaaagttt ttgcaaattt attggataaa
    19921 gaatatcaaa aatacaatat cagtgaactt gatcttgaag tatttaaatt aaaatttata
    19981 caatttgcta aaaatgaaaa agagcatttt tcaaaaggct tttatgtcgc acatacagag
    20041 cttgagttaa acaatatttt aaagctcgga acagatagta taaaacttaa gggtactata
    20101 gatcgtatcg atagttcaaa agaaggtaat ttgattattg attataaaag tggaaaagtg
    20161 ccaagtaatt cttatcaact tgctttttac caagctttat atgatgaaaa tgcaagcgtg
    20221 ggtttttatg atttaaatag tatgcaaata ttgcatcaaa aagccaaaag tttagatgag
    20281 ctaagagaaa gacttaaaga tttagttctt atgagtaagg aagaaataga gtttgaaaat
    20341 gaacaagatg agtattgtcc ttataaactc atttataaaa aggaattaaa atgagtcaat
    20401 ttgagccttt tttagcatta gaagcgagtg caggaagcgg aaaaaccttt gccctgagtg
    20461 tgcgttttgt agcacttatt ttaaaaggag ctaggattaa tgaaatttta gctttgactt
    20521 ttaccaaaaa agctgctaat gaaatgcaaa aaagaattat tgagactttt ttaaacttag
    20581 aaaaagaaaa taaaaccagt gaatgcaatg aactttgcaa gcttttaggt aaagataaag
    20641 aagagcttat ttctttaaga gatgctaaaa aagaagaatt tttaagaaca gagttaaaaa
    20701 tcagtacttt tgatgctttt ttcggaaaaa ttttgcgtgt ttttgcttta aatttgggct
    20761 taagtagtga ttttacaatg agtgaagaga ggcttgatgt aagagagatt tttttaaaac
    20821 ttcttaaaaa agatgaatta aaagatttgg cttattatat taatttagtt gatgagaaag
    20881 aaaatttttt taacgagctt gaaaaatttt atgagaatgc ttattttcaa aatcgtccta
    20941 aaattctaaa tccaactaaa gcttatatca ataaagctta tagtgagtta agaagttatt
    21001 gtttgggtct tactcatgta aaaaattata aaaatttgtg tgacaatttc aaaagtgaag
    21061 ttttagattt atccgtgttt atgcaatcaa gttttatgac aaaatttgaa agtacaaaat
    21121 atttacaaga tttagaaagt actaacctgc attttagtgc aaaaagaatg gagcttataa
    21181 atgctttaaa tacctatgcc atagagcttg aaaattataa aattgctaat ttaatgaatc
    21241 ttttaaatca ttatagtgaa gctaaaaata tatttcataa agataaaaat accttaaatt
    21301 tccaagatgt gagtaaaaaa gtttatgagt taataaccag tgaatttaag gatatgattt
    21361 attttcgttt agatggtttt atttcgcatt tgcttattga tgaatttcaa gatacaagcg
    21421 tgatccaata tcaaatttta cgccctttga tcgctgagct tgtttcagga gaaggggtta
    21481 agaaaaatcg cacttttttt tatgtaggag ataaaaaaca aagtatttat cgctttcgta
    21541 aaggaaaaaa agaattattt gatttgttaa aacaagaatt tagtcaaatt aaaagtgata
    21601 atttaaatac taattatcgt tctaaagagc ttttggttga ttttgttaat gaaactttta
    21661 aagaaaaaat caaagattat aaagaacaat ttgccttaga aagtaaaaaa ggcggttttg
    21721 tgcgtattgt ggagtctaag gaacaaaagg ttaaaaacca agcccaagaa attaaggaaa
    21781 agactttaga aactttattt gagcaaatta attttttaag atctaaaaat atttcttatg
    21841 atgatatttg tattttgtgt tggaaaaata gtgatgcaga tatggttttg gattttttaa
    21901 gagagcaaaa tattcctgca tttactcaaa gcaatgtttt acttgaaaat aaagcaagtg
    21961 taagacttgt tttagaatat gctaaatatt gtatttttgg tgatgagttt tacttggtat
    22021 ttttaaagga acttttaggt tttgagccga gaaaaattac ccttgatttt tcaaaaaatg
    22081 ctatggaaaa tgtacttttt ttaataaaag aattaaaact tgatttaaat gatatcgctt
    22141 taatacaatt tatcgaatat gctaaaacta aggagaattt tttaaagctt ttatttgagc
    22201 cttgtgcttt gaaaatagta agcgaacaaa atatgggaat tagtattatg agtgtgcata
    22261 aatctaaggg tttggaattt gatcatgtga ttttacttga tagtttatct aaaaacaatt
    22321 caaacaatga agatatcatg cttgaatatg atatcaatca aggttggcaa ctccatatta
    22381 aagataaaat tcgagagctt actaaagagc ctatttatac tctttttaaa gaaaatatta
    22441 caagagcaaa ttatgaagat gatattaata aactttatgt ggcttttaca agagctaagg
    22501 aaagtttgat catcataaaa agaaatgaag aaagtgtaaa tggaaattat ccaagttatt
    22561 ttaagggggg atttttaaat atacattctc aagagagagg ttttttagaa agcaaagaac
    22621 aaattttaag cgttaaaaaa gaaagcattc aaactttgca aaaatttgaa aaaattacct
    22681 tgcaagaaat tcaaagtgaa gaaaggcttg atagtaaaga actatatttt ggaaatgctt
    22741 ttcacttttt tatgcaaaat ttaaaacttc ctaagggtga aaattttcaa atacttactc
    22801 aaagatgcaa gagtaaattt agacattttt tagatgagag tgattttgaa aagcttttta
    22861 aaagaattga aattttactt aaaaatattc aatttcaaaa tttgattggt gatggaaagc
    22921 ttttaaaaga acaagctttg agttttaatg gagaaattaa acaattagac ttgcttgctt
    22981 taaaagatga agaagctttt ataattgatt ataaaacagg tcttgctatg caagataaac
    23041 ataaagagca ggtaggaact tataagatcg ccattagtga aattttgcaa aaagataaag
    23101 tgcgtgcttt tatagttt
//
LOCUS       DAPIVO010000020        23016 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.020, whole genome shotgun sequence.
ACCESSION   DAPIVO010000020 DAPIVO010000000
VERSION     DAPIVO010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23016)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23016)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23016
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.020"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            14..463
                     /locus_tag="RJ239_000743"
     CDS             14..463
                     /locus_tag="RJ239_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HDV7330874.1"
                     /translation="MSVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAY
                     EEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYL
                     LAEFKKLNEAAEKESDTTTAAFAQENIAKYEKSLWMIGATLQGACKM"
     gene            528..1565
                     /locus_tag="RJ239_000744"
     CDS             528..1565
                     /locus_tag="RJ239_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7330875.1"
                     /translation="MKVLNFFYENHPKFEVSYERKNQISKPNIIIKGPRFCGKKTLIF
                     NFLSQFKASEILFLDLYDTRFEKQSLERLADFLNENLQIKILCLYNLDFIPNLEKINI
                     PIILSTNIKDLNVNGFEELELDYFDFEEFISVSKKNLPINNLVGLFLQSGRSKFGEKN
                     ILLRQSFTLLELEILKYLALNLGQQISISKIFIELKKRLKTSKDSVYQAIKKLENTYV
                     IYTLKHDEKKLQKIYFKDFGLRNNLCISKDFSHLFENLVLSELFKFKEEFFYNKYFNF
                     YSQISKIAYISSPTLDIDLIKLRAKKILPKALELGIFHVIFITLSSEDNFFEQGVKFE
                     VISFDKFSLGF"
     gene            complement(1562..2293)
                     /locus_tag="RJ239_000745"
     CDS             complement(1562..2293)
                     /locus_tag="RJ239_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HDV7330876.1"
                     /translation="MKPIIIFFSLFLIPLFADDLKSGFGEEYYKLDIDQKRQIFFIKM
                     NEMFDQSFKKIEQERAFIEAFFKDAYKTGFRTSNQINLEKLITIKNKYRIENLYDFAE
                     YKKRIQKIPKSMGIAQALVESATGTSRFAREANNLFGEWTWGEKGLIPDLRHPDKKHK
                     IKIFDSLQDSVDSYVLNLNRHFAYEKFRDARAKFESEGKEITGLEAIKTLDSYSERKG
                     YYINLITKIIKRYNLEKYDTNSNNT"
     gene            complement(2268..3017)
                     /locus_tag="RJ239_000746"
     CDS             complement(2268..3017)
                     /locus_tag="RJ239_000746"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HDV7330877.1"
                     /translation="MKFYKYCASGNDFVITNADRKEDRSALAKELCNRYEGIGADGFI
                     VILPHEKYDFEWEFYNNDGSRAAMCGNGSRAAAHFAHHINKINPNMSFLTGAGIIKAK
                     VNQDKVEVSLGKIKSVQNTFEELGKTWQLCNTGVPHLVHFCQNLDEFDTMLCQKMRQK
                     YNANVNFVKILDENHLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNKVKITPK
                     SGEEVGFAYKNEELFFEGKVKYCFEANYNFF"
     gene            complement(3014..3619)
                     /locus_tag="RJ239_000747"
     CDS             complement(3014..3619)
                     /locus_tag="RJ239_000747"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HDV7330878.1"
                     /translation="MKNAFFVTASIACGKSTFIEIANSLGFKSISADKIAHKILDENA
                     LELEKIFSPFSLKNLLKKEKKIDRKILGEIVFNNKEAKKILENFTHPKIRAKILEQMQ
                     ILDKENKAFFVEIPLFFESGAYENLGKVIVIYTPKELSLKRIMQRDKLSLEAAKARLD
                     SQIDIEEKLKKADFIIKNTNSYADFRQECVKVIQEISKGNM"
     gene            3680..4669
                     /locus_tag="RJ239_000748"
     CDS             3680..4669
                     /locus_tag="RJ239_000748"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HDV7330879.1"
                     /translation="MKISYEDAGVSIDNGNTFVEAIKPLVKETFNDNVVGGIGSFAGA
                     FRMPSGFKKPVILGATDGVGTKLRLAIDAKKYDTIGQDLVAMCVNDLICNFATPLFFL
                     DYYATAKLEVEVAKAVVSGIAKGCKMANCALIGGETAEMPGMYAKDDFDLAGFAVGMA
                     EEDEIDRSKFVKNGDILLALSSSGLHSNGYSLARKVLFESLKLKFDDKIEGKNLIDIL
                     LEPTRIYVRDFLTLKPYISALAHITGGGLVENLPRVLPRGMGATIRKHHLKTPEIFYT
                     IGQAVEESEMYRSFNMGVGLVMVVDPSNVSKILENSDAFIIGEICINEGIVLE"
     gene            complement(4690..6144)
                     /gene="dcuC"
                     /locus_tag="RJ239_000749"
     CDS             complement(4690..6144)
                     /gene="dcuC"
                     /locus_tag="RJ239_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DcuC"
                     /protein_id="HDV7330880.1"
                     /translation="MPIFMICSTLLAVIVVAYYILKKYNPIFVFFLSGIILLIFAFYI
                     TGTPIQKAPSREHASFLNVLLDSYAFITATFKSQLSGVGLIIMSVAGFAAYMKHINAS
                     AKLAFLANKPLGKIKNKYLILSGTFVVGMALKIVISSYAGLLLLLLACIYPVLISLKI
                     RPITAVCVLSLIALDYGPKDGNSINMADMVGQSDNVVGLFLNYQIYSVIAYVVVIAIL
                     IPFYFAWIDKRDKEKGVLNDEVEIPQIIDPKCPTFYILFPWLPVVFLFTAYFFTIKLD
                     VVTANFVSISLVFLVEFARHRNARKLGEDIMVILKAMAEIFISVVSIIIAAGVFAEGI
                     KALGGVNILANAVSNLGTGNFAWFGILLSIAILSFLVYFATVIMGSGIAAFNTFGKLA
                     PDIATKLGVAPITLVLPIEIASCLGRAASPIAGGIIALAGFAKVAPMDIIKRTTPLLL
                     IAMLVNVLVAFYLAQTNPLPKEQNTTKIELKIQK"
     gene            6351..9314
                     /gene="cas9"
                     /locus_tag="RJ239_000750"
     CDS             6351..9314
                     /gene="cas9"
                     /locus_tag="RJ239_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344900.1"
                     /note="Cas9, originally named Csn1, is the large,
                     multifunctional signature protein of type II CRISPR/Cas
                     systems. It is well known even to general audiences
                     because its RNA-guided endonuclease activity has made it a
                     popular tool for custom editing of eukaryotic genomes;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR RNA-guided endonuclease Cas9"
                     /protein_id="HDV7330881.1"
                     /translation="MARILAFDIGISSIGWAFSENDELKDCGVRIFTKAENPKTGESL
                     ALPRRLARSARKRLARRKARLNHLKHLIANEFKLNYEDYQSFDESLAKAYKGSLISPY
                     ELRFRALNELLSKQDFARVILHIAKRRGYDNIKNSDNEEKSEILKAIKQNEEKLVNYQ
                     SVGEYLYKEYFQKFKENSKEFINVRNKKESYERCIAQSFLKDELKLIFQKQREFGLSF
                     SKKFEEEVLSVAFYKRALKDFSHLVGNCSFFTDEKRAPKNSPLAFMFVALTRIINLLN
                     NLKNTEGILYTKDDLNTLLNEVLKNGTLTYKQTKKLLGLSDDYEFKGEKGTYFIEFKK
                     YKEFIKALGDHSLSQDDLNEIAKDITLIKDEIKLKKALAKYDLNQNQIDSLSKLEFKD
                     HLNISFKALKLITPLMLEGKKYDEACNELNLKVVINEDKKDFLPAFNETYYKDEVTNP
                     VVLRAIKEYRKVLNALLKKYGKVHKINIELAREVGKNHSQRAKIEKEQNENYKAKKDA
                     ELECEKLGLKINNKNILKLRLFKEQKEFCAYSGEKIKLSDLQDEKMLEIDHIYPYSRS
                     FDDSYMNKVLVFTKQNQEKLNKTPFEAFGNDSTKWQKIEVLAKNLPTKKQKRILDKNY
                     KDKEQKDFKDRNLNDTRYIARLVLNYTKDYLDFLPLSDDENTKLNDIQKGSKVHVEAK
                     SGMLTSALRHTWGFSTKDRNNHLHHAIDAVIIAYANNSIVKAFSDFKKEQESNSAELY
                     AKKISELDYKNKRKFFEPFSGFRQKVLDKIDEIFVSKPERKKPSGALHEETFRKEEEF
                     YQSYGGKEGVLKALELGKIRKVNGKIVKNGDMFRVDIFKHKKTNKFYAVPIYTMDFAL
                     KVLPNKAVVQGKDKKSGLIKDWILMDENYEFCFSLYKDSLILIQTKDMQEPEFVYYNA
                     FTSSTVSLIVSKHDNKFETLSKNQKILFKNANEKEVIAKSIGIQNLKVFEKYIVSALG
                     EVTKAEFRQREDFKK"
     gene            9311..10201
                     /gene="cas1"
                     /locus_tag="RJ239_000751"
     CDS             9311..10201
                     /gene="cas1"
                     /locus_tag="RJ239_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR-associated endonuclease Cas1"
                     /protein_id="HDV7330882.1"
                     /translation="MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINII
                     VLESLQISISSALFNAFAKYKIILLTCDETHSINGVFTPFLGHFQSAKIAKEQMNVSA
                     QKKAILWQKIIKNKILNQAFILKKHNKIEQSNELINLAKKVSLNDSKNIEAVAAALYF
                     KTLFGTSFSRDELCFENSALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALC
                     DDLIEVFRASVDDCVLKLKGESEFLSKDDKRALIGNLQSKINFDGQNYPLNRAINHYV
                     ANFKNALLYEDELKIVKFDD"
     gene            10194..10625
                     /gene="cas2"
                     /locus_tag="RJ239_000752"
     CDS             10194..10625
                     /gene="cas2"
                     /locus_tag="RJ239_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
                     /protein_id="HDV7330883.1"
                     /translation="MIEDKFMRVLLMFDVPTKSKKEQKLASKFRNNLIKLGYFMLQFS
                     VYMRICKGLSSAKSSIENVKKILPPYGNVRALIITEKQFDKMELLLGGIVFNEKVNNE
                     TNLTLFDIDSHGEFKYKNSNNEEIQINKKQEKYHQQNLFEF"
     gene            complement(11123..12313)
                     /locus_tag="RJ239_000753"
     CDS             complement(11123..12313)
                     /locus_tag="RJ239_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HDV7330884.1"
                     /translation="MLMSYEESLKILHSHIKTYEKIEKIALTECLGRILAQDIKAPKN
                     QPEFPTSAMDGYAIKFEDQDKPLKILGLTPAGTMPQFSVQNGTCVKTFTGSLMSEGSD
                     TLVPVENIRIENNTLFIEKKVPQAFAVRAVGENYKKDEILLKKGTRLNYSEIALLAEL
                     GFFHISVFIKPIVGVLSSGSEIKDLGEALENPAQIRSSNHIAIANLAKNLNCDTRVFP
                     LLKDDEKATFSTLESALQSCDILVTTGGVSMGDFDFLKKAIKEYEIIIDKADIKPGRH
                     IKIAKANEKFIIALPGFPYSAMVMFNLYTREILNSWLLQPKDYICKAFLQGSYKKKTP
                     YLEFVACNIEFKNGRILANLEGKKEGSSAIINNLNNKAALMVVPKECEMLENESLVDI
                     IFMP"
     gene            complement(12317..12763)
                     /locus_tag="RJ239_000754"
     CDS             complement(12317..12763)
                     /locus_tag="RJ239_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HDV7330885.1"
                     /translation="MKHFTLYQGSLDIPKIYSQWYEFSKDKNCGALLTFCGIVREEGG
                     IEALSFDIYESLLKKWFDEWQKRVDFDGISLLFAHSIGDVAIHESSYFAGILSKQRKL
                     GLKLLNEFVEDFKASAPIWKYDVINKERIYAKERSTKLCGAGLLKG"
     gene            complement(12764..12985)
                     /locus_tag="RJ239_000755"
     CDS             complement(12764..12985)
                     /locus_tag="RJ239_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HDV7330886.1"
                     /translation="MVKVEFLGPINKENLELEVKNLKELKEILQKDESLKEWLELCAV
                     SLNDEIIFNENTKLKDGDKIALLPPVCGG"
     gene            complement(12987..14528)
                     /gene="cueO"
                     /locus_tag="RJ239_000756"
     CDS             complement(12987..14528)
                     /gene="cueO"
                     /locus_tag="RJ239_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase CueO"
                     /protein_id="HDV7330887.1"
                     /translation="MNRRNFLKFNALTLASMGVAYANPMHDMHSMHKNHSINHDLDTS
                     FINFAPKNLKLLDPKQFPQGEILKALPLLKNESKEKNIFRATLEIKENHIELIKGKKT
                     LFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAG
                     EERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHLKEKDLMI
                     SDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNERIRIYNATAARYLN
                     LRIQGAKFILVGTDGGLIEKAIYKEELFLSPASRVEVLIDAPKDGNFKLESAYYDRDK
                     MMVKEESNTLFLANINLKKEKLELPKNLKIFKPLEEPKEFKEIIMSEDHMQMHGMMGK
                     SENELKIALASMFLINGKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFEL
                     ISSKLNGKVQKAEFRAFRDTINVRPNEELRLKMKQDFKGLRMYHCHILEHEDLGMMGN
                     LEVKE"
     gene            14652..15800
                     /gene="nspC"
                     /locus_tag="RJ239_000757"
     CDS             14652..15800
                     /gene="nspC"
                     /locus_tag="RJ239_000757"
                     /EC_number="4.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxynorspermidine decarboxylase"
                     /protein_id="HDV7330888.1"
                     /translation="MFYEKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFA
                     FSGAMKIVGEYLKGCTCSGLWEAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVF
                     NSLAQFHKFQAKTQKNSLGLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLSTI
                     EGLHFHALCEESAGALEAVLKVFEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIAL
                     CKNFSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIM
                     PYTSEVLNARILATRENEKISDLKESEFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKI
                     VFLDQIHYTIVKNTTFNGIRLPNLMLLNAKNELQMIREFSYKDYSLRN"
     gene            16104..16817
                     /locus_tag="RJ239_000758"
     CDS             16104..16817
                     /locus_tag="RJ239_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD family protein"
                     /protein_id="HDV7330889.1"
                     /translation="MGALMDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTM
                     QECLFDENLKSNFDILLKHLDDENSIQAFFKEYDLLFLSLKNSIPTTFSYIEEGFENS
                     NPLLCVRQILVKSKIRRNEKFFKESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINK
                     SIDEFLGDVFMNKNANLYKEIASIASAFMEFERLCFEVEKPAKINSKKVQNDLSRSEF
                     LRREANKQRRTREKSQGIS"
     gene            16792..16983
                     /locus_tag="RJ239_000759"
     CDS             16792..16983
                     /locus_tag="RJ239_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HDV7330890.1"
                     /translation="MKNRREFLKKSAFALGAAGVLGSTTLALAKDEERKDLVKGKSKK
                     KEVLFQRSANWENYYIKAE"
     gene            16983..17525
                     /locus_tag="RJ239_000760"
     CDS             16983..17525
                     /locus_tag="RJ239_000760"
                     /inference="COORDINATES: protein motif:HMM:NF016750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HDV7330891.1"
                     /translation="MSSVGENIKLTRRSFLKMAALSSLATPLLARSETLREASADELK
                     EAYEGSKKVKTVCTACSVGCGIIAEVQNGVWVRQEIAQDHPVSSGGHCCKGSDMIDMV
                     RSHVRLKYPMKKENGEWKRISYEQALSEIGEKLAAYRKENPESVMFLGSAKLNNEQAY
                     YIRKFAAFFGTNNVDHQARI"
     gene            17574..19787
                     /locus_tag="RJ239_000761"
     CDS             17574..19787
                     /locus_tag="RJ239_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002896872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HDV7330892.1"
                     /translation="MTNHLGDIQRSKCIIIIGANPAVNHPVGFRHFLKAKEKGAKLIV
                     VDPRFTKSAAKADIYARIRPGTDIAFMYGMLKIIFDEGLEDTKYLDERVFGIDKIREE
                     AAKWTVEEVENVTGISKELLVQITHEVAKNKPTTLIWAMGLTQHTVGTSNTRLAPIVQ
                     MVLGNIGKFGGGVNILRGHDNVQGASDMACLSENLPGYYPLNEATWRYYAKIWGVDYE
                     WLLGNFVSKDWMHKTGLSLARWWAAALNGKDGNDAIDNAGTPLKALVVMGNGITSTAQ
                     QVKVKEGLEALELLVLADPFVNEAGIIAERKDGIYLLPAATQFETSGSVTATNRSGQW
                     RFKVVDPLYESMEDQEILFELAKKLGFYEDFTKTLRDEKGEIVWPENATREIAKAVRS
                     IGLNGWSPERLKKHTLYWDKFDEVTLEGKDEVAGEYYGLPWPCWSDKHPGSPVLYNTD
                     IEVAKGGMGFRNNFGLEYEGESLLAKNAPLNSPIDTGYPQITKDNIEKVLGITLSAQE
                     KEKMGSTWSYDDSNIIATKCIEKGIVPYGNAKARAVVWTFKDKIPLHREPLHSPRNDL
                     VQKYPSFEDQKALYRVDTKFVSVQQAKDYSKEFPLNLVTARLVNLNGAGMENRASMYL
                     TRLTPEMFCEINPELAKEQDIKAGDMIWVHSPEGTKIHVRVKVNPGVAKDMIFLPFHF
                     TGVMQGVDLTHNFPEGTKPYASGESANTVTNYGYDIMCQIPETKGGLCRISKDGK"
     gene            19784..20425
                     /locus_tag="RJ239_000762"
     CDS             19784..20425
                     /locus_tag="RJ239_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HDV7330893.1"
                     /translation="MSKVNFANLEKERLKFFCDNERCIDCNGCAVACDEAHELPIHIR
                     RRRVITLNEGIQGKEVSTSISCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCG
                     YCLYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPEATNSEKERELYGQNRIAEGKVP
                     VCAAMCSTKALLVGESSKIEEIYHNRLMNRNYGIPNPSESLEWKIAYTGKERL"
     gene            20422..21354
                     /locus_tag="RJ239_000763"
     CDS             20422..21354
                     /locus_tag="RJ239_000763"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HDV7330894.1"
                     /translation="MRKVFVTLLLSVVSLFAYGSERMGQDTQIWDFHRITNIPNYDTF
                     GKLWTTLQGEYIATIALIAVIAVLSAFALHYMVIGPKQFSHDGKKIYAFTLFERLFHF
                     IAAISWVILVPTGFVMMFGEVFGGGVFVRVCKNLHAFATILFIISIIPMFLCWIKRML
                     PASYDIRWMMIVGGYLSKIKRPVPAGKFNFGQKSWYYIAVFGGFLMIITGGFMYFLDF
                     NSTAIQGLFGLTQIELLRISAIVHNFLGIVCAVFFGVHIYMAVFAIKGSIHSMISGYK
                     EEEEVYILHSYWYKELSNKKQIEPSFSYDPNVKI"
     gene            21521..22303
                     /gene="fdhD"
                     /locus_tag="RJ239_000764"
     CDS             21521..22303
                     /gene="fdhD"
                     /locus_tag="RJ239_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HDV7330895.1"
                     /translation="MDPLFTTQILKYKGDESFTCNDTLVREIKLEIFINDEKVGALMA
                     TPVDEQALAIGYLMSENIIAKVSDIESIETKDDGMSVHIKAKIDKENLAKLNAEGVVI
                     SGCGRAHTANIDPEAIEASKISSDAKFSKDEILKQMSTFYTQCELYEKTGCVHTAKLF
                     VDEKTFFIGEDIAQHNTIDKALGKACLAGVDLSQCFLMVSGRLSSEMVAKAVMHKIPV
                     LVSRTAPTCLGVMIARKFDLTLCGFARENKINIYSGEFRIHG"
     gene            22296..>23016
                     /locus_tag="RJ239_000765"
     CDS             22296..>23016
                     /locus_tag="RJ239_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HDV7330896.1"
                     /translation="MDKNQEKEIISYMRELLNSNEKLDCGTAFKIAKKFNINIEKIGQ
                     LADENHMRIDNCELGQFGHLDFEKAKIEVLKKIEPSLDEKRRIFCKDARDIAKEGCGL
                     KSMRSALKTYKVDVKYCQLGCFKEKKGKQFIVRTKTWIENADGDLLFGRGKTELLELI
                     GQTGSLLHASKLMGINYKKAWMHLQTLQKNSQEILVSTRQGRSKESGTKLTPRAMELM
                     ENYSILQKDIEEYANKRFKELF"
BASE COUNT         8100 a         3150 c         4026 g         7740 t
ORIGIN      
        1 aaaggagtca atcatgtcag ttacaaaaca attattacaa atgcaagcag atgctcatca
       61 tttatgggtt aaatttcata attatcactg gaatgtaaaa ggtttgcaat ttttttctat
      121 acacgagtac acagaaaaag cttatgaaga aatggcagaa ctttttgata gttgtgctga
      181 aagagtttta caacttggcg aaaaagctat cacttgccaa aaagttttaa tggaaaatgc
      241 aaaaagtcca aaagttgcaa aagattgctt tactccgctt gaagtcatag aactgatcaa
      301 acaagattat gaatatcttt tagcagaatt taaaaaactc aatgaagcag cagaaaaaga
      361 aagtgatact acaacagctg cttttgcaca agaaaatatc gcaaaatatg aaaaaagtct
      421 ttggatgata ggcgctactt tacaaggtgc ttgcaaaatg taatttaagg ggctttatgc
      481 cccaattata caaactaggt tataatatcc ttttttaaag gataaaattg aaagtactta
      541 atttttttta tgaaaaccac cctaaatttg aagtaagtta tgaaagaaaa aatcaaattt
      601 caaaaccaaa tattatcata aaaggcccac gattttgtgg taaaaaaaca cttattttta
      661 attttttatc tcaatttaaa gcaagtgaaa ttttgttttt agatttatat gatacacgct
      721 ttgaaaaaca aagtttagaa agacttgctg attttctgaa tgaaaattta caaattaaaa
      781 ttctttgcct ttataatttg gattttatcc ctaatttaga aaaaattaac attcccatca
      841 tcttaagtac aaatataaaa gatttaaatg taaatgggtt tgaagagctt gaacttgatt
      901 attttgattt tgaagaattt attagtgtaa gtaagaaaaa tttacctata aataatttag
      961 taggtctttt tttgcaaagt ggacgcagta aatttggaga aaaaaacata cttctaagac
     1021 aaagcttcac tcttttagaa ttagaaattt taaagtattt agctttaaat ttgggtcagc
     1081 aaatcagtat ttctaagata tttatagaac tcaaaaaaag attaaaaact tcaaaagata
     1141 gtgtttatca agctataaaa aaattagaaa atacttatgt gatttatacc ttaaaacatg
     1201 atgaaaaaaa acttcaaaag atttatttta aagattttgg cctaagaaat aatctttgta
     1261 tttcaaagga tttttcacat ttatttgaaa atttagtttt aagcgagttg tttaaattta
     1321 aagaagaatt tttttataac aaatacttta acttttatag ccaaatatct aaaattgctt
     1381 atatttcaag tccaacttta gatattgatt tgatcaagct acgtgctaag aaaattttac
     1441 caaaggcttt agaacttgga atttttcatg tgatttttat cactctttca agcgaggata
     1501 atttttttga acaaggggtt aaatttgaag tcatatcttt tgataaattt tcacttggat
     1561 tttaggtgtt gtttgagttt gtatcgtatt tttcaaggtt gtatcgtttg atgatttttg
     1621 taataagatt gatataatat cccttgcgtt cagaataaga atctaaagtt ttaatagcct
     1681 ctagccctgt tatctctttg ccttcgcttt caaatttagc tcttgcatcg cgaaactttt
     1741 cataagcaaa atgacgattt aaatttaaaa cataagagtc aacactatct tgcagactat
     1801 caaaaatttt aattttgtgt tttttatctg gatgtcttaa atcaggaatt aaacctttct
     1861 caccccaagt ccattctcca aaaagattgt ttgcttctct tgcgaagcga ctggtacctg
     1921 tagcactttc aactaaagct tgggctatac ccatggattt tggaattttt tgaatacgtt
     1981 ttttatattc tgcaaaatca taaagatttt caatgcgata tttgtttttt atcgtgataa
     2041 gtttttcaag atttatttgg tttgaagtcc taaagcctgt tttgtaagca tctttaaaaa
     2101 aggcttcgat aaaagctctt tcttgttcaa tttttttaaa gctttgatca aacatttcat
     2161 tcatttttat aaaaaaaatt tgtctttttt gatctatatc aagtttgtaa tattcttctc
     2221 caaatccact ctttagatca tcagcaaaaa gtgggattag aaaaagacta aaaaaaatta
     2281 taattggctt caaaacaata ctttaccttt ccttcaaaaa acaattcttc atttttatat
     2341 gcaaacccta cctcttcacc acttttagga gttattttaa ctttattttg tactttttta
     2401 tttaaaaatg ccagataaaa acaagccccc attcctgtgc cacaagctaa ggtttcatct
     2461 tcaactccgc gttcataggt gcgaactttt aaatgatttt catctaaaat ttttacaaaa
     2521 ttaacattgg cattatattt ttgtctcatt ttttgacaaa gcattgtatc aaattcatct
     2581 aaattttgac aaaaatgtac tagatgtgga actccagtgt tgcaaagttg ccaagttttt
     2641 cctaattctt caaaagtatt ttgcacgctt tttattttgc ctaaagatac ttcaacttta
     2701 tcttgattta cctttgcttt tattattcct gcaccggtta aaaaactcat gttaggattt
     2761 attttgttaa tatgatgtgc aaaatgtgcc gcagcccttg agccattgcc acacatagca
     2821 gcccttgagc catcgttatt ataaaattcc cattcaaagt cgtatttttc atgaggcaat
     2881 attacgataa agccatccgc acctataccc tcataacgat tacaaagttc tttagctaaa
     2941 gcacttctat cttcttttct atcagcattt gttatgacaa aatcattccc acttgcacaa
     3001 tatttataaa atttcacatg tttcctttag aaatttcttg tattacttta acacattctt
     3061 gcctaaaatc ggcataagaa ttagtatttt taatgataaa atctgctttt ttaagttttt
     3121 cttcaatatc tatttgagaa tcaagtcttg cttttgcagc ttctaagcta agcttatctc
     3181 tttgcatgat tcttttaagg cttaattctt taggtgtgta aattacaatg actttgccta
     3241 aattttcata agcaccgctt tcaaaaaaaa gaggaatttc tacaaaaaaa gctttatttt
     3301 ctttatctag aatttgcatt tgttctaaaa ttttagctcg aattttagga tgagtgaaat
     3361 tttctaagat ttttttagct tctttattgt taaaaacaat ttctccaagg atttttctat
     3421 cgattttctt ttcttttttg agtaaatttt ttaaactaaa gggagaaaaa atcttttcaa
     3481 gttctaaagc attttcatct aaaattttat gagcgatttt gtctgcgcta atgcttttaa
     3541 agcctaaaga attcgctatt tctataaaag tgcttttacc acaagcaatt gaagcggtta
     3601 caaaaaaagc atttttcatc ttatgcctta ttaaaacttt tttcgttaaa ataccttttt
     3661 agttcttaaa ggaaaataaa tgaaaatttc atatgaagat gcaggcgtaa gtatagataa
     3721 tggaaatacc tttgtagagg ctataaaacc tttggttaaa gaaactttta atgataatgt
     3781 tgtaggtgga attggttctt ttgctggtgc ttttagaatg ccaagtggtt ttaaaaagcc
     3841 tgtgatttta ggtgcaacag atggggttgg taccaagctt cgcttggcaa ttgatgctaa
     3901 aaaatatgat actatagggc aagatttagt agcaatgtgc gtgaatgatt tgatttgtaa
     3961 ttttgctacg cctttgtttt tcctagatta ttatgctaca gccaagctcg aagtagaagt
     4021 agcaaaggct gttgtatcag gcattgccaa gggatgtaag atggcaaatt gtgcattaat
     4081 tggcggagaa actgctgaaa tgcctggaat gtatgcaaaa gatgattttg atcttgcggg
     4141 ttttgcagtg ggtatggctg aagaagatga gattgataga agtaaatttg ttaaaaatgg
     4201 tgatatttta ttggcacttt ctagttcagg acttcattca aatggttatt ctttagctag
     4261 aaaagtactt tttgaaagtt taaaattaaa atttgatgac aagatagagg gtaaaaattt
     4321 aattgatatt ttgttagaac ctacaaggat ttatgtgcgt gattttctta cactaaagcc
     4381 ttatatcagt gctctagcac atattacagg gggtggttta gtagaaaatt taccacgcgt
     4441 tttacctcgt ggtatgggtg caactatacg caaacatcat cttaaaactc ctgaaatttt
     4501 ttatactata ggacaggctg tagaagaaag cgaaatgtat agaagcttta acatgggagt
     4561 gggtttagta atggttgtag atccttctaa tgtaagtaag attttagaaa attcagatgc
     4621 ctttattatc ggcgaaattt gcattaatga aggtattgtt ttagaatgaa aataaagcgt
     4681 taatacgctt tatttttgta ttttaagttc tatttttgta gtgttttgtt cttttggcaa
     4741 aggattggtt tgtgctagat aaaaggctac aagtacattt acaagcatag cgataagtaa
     4801 aagaggagtg gttcgtttta taatatccat tggagctact tttgcaaatc cagctaaagc
     4861 tatgattccg cctgctattg gtgaagctgc acgacctaaa caagatgcaa tttctatagg
     4921 taaaactaga gtaataggtg caacgcctaa ttttgtagct atatcaggag ctagttttcc
     4981 aaaagtatta aaagcggcaa ttccacttcc cataatcact gtggcaaaat aaactaaaaa
     5041 gcttaaaata gctatactca aaagaattcc aaaccatgca aaatttcctg ttccaagatt
     5101 tgaaaccgcg ttagcaagga tattaactcc accaagtgct ttaatgcctt cagcaaatac
     5161 tccagcggcg atgattatgc ttacgactga gataaaaatt tcagccatag cttttaaaat
     5221 caccattata tcttcgccta attttctagc atttctgtgt cttgcaaatt caacaagaaa
     5281 aactaaagaa atgcttacaa aatttgctgt tacaacatca agcttgatag taaaaaaata
     5341 cgctgtaaat aaaaatacaa caggtaacca aggaaagagt atgtaaaaag tagggcattt
     5401 aggatcaatg atttgcggaa tttcaacttc atcatttaaa acaccttttt ctttatctct
     5461 tttatcaatc caagcaaaat aaaaaggaat caagatggca ataactacaa cataggcaat
     5521 cacactataa atttggtaat ttaaaaaaag ccctacgaca ttatcacttt gtcctaccat
     5581 atctgccata ttgattgaat ttccatcttt tggaccataa tcaagcgcaa ttaaagaaag
     5641 cacacataca gctgtaatag gacggatttt aagtgagatt aaaacaggat aaatacatgc
     5701 taacaaaagc aaaagcaatc cagcatagct agaaatgacg atttttaaag ccattccaac
     5761 aacaaaagtt ccacttaaaa tcaagtattt atttttgatt tttcctaagg gtttatttgc
     5821 taaaaaagca agttttgccg aagcattgat atgtttcata taagcagcaa aacctgccac
     5881 actcatgata ataagtccta ctccagaaag ctgactttta aaagtcgctg tgataaaagc
     5941 ataactatca agtaaaacat tcaaaaagct tgcatgttct ctgctcgggg ctttttgtat
     6001 aggtgttcct gtgatgtaaa aagcaaaaat aagcaagata atacctgaaa gaaaaaatac
     6061 aaaaatggga ttgtattttt tgagtatata ataagcaaca acaattaccg ctaaaagtgt
     6121 agaacatatc ataaaaattg gcatgatttc tcctaaggtt attattagct tttattttat
     6181 tttagctaaa atttaactaa taaatatttt tcatttaaaa ttttacttat tttttgcatt
     6241 ataaaattaa tcatatgtat agtttggtta ctgaaaagtt tatgtttgta taaaaaatga
     6301 tttttatatt ataattataa acaaatcata aatattaaaa aggatctagt gtggcaagaa
     6361 ttttggcatt tgatatagga ataagctcta ttggctgggc atttagcgaa aatgatgagt
     6421 taaaagattg cggagttagg atttttacaa aggctgaaaa tcctaaaaca ggagaatcct
     6481 tagccttgcc aagacgcctt gcaagaagtg ctagaaaacg ccttgctaga cgcaaagcaa
     6541 ggctaaatca cttaaaacat ttaatcgcaa atgaatttaa gttaaattac gaagattatc
     6601 aaagctttga tgaaagttta gctaaggctt ataaaggctc tttaattagc ccttatgagt
     6661 taagatttag agctttaaac gagcttttaa gtaagcaaga ttttgcaaga gtgattttac
     6721 atattgcaaa aaggcgtggt tatgataata taaaaaatag cgataatgaa gaaaagagtg
     6781 aaattttaaa agctatcaag caaaatgaag aaaaactagt aaattatcaa agtgtgggag
     6841 agtatcttta taaagagtat tttcaaaaat tcaaagaaaa ttccaaagaa tttataaatg
     6901 ttagaaataa aaaagaaagt tatgaacgct gcatagcgca aagtttttta aaagatgaat
     6961 taaagcttat ttttcaaaaa caaagagaat ttggcctttc tttttcaaag aaatttgaag
     7021 aagaagtgct tagtgtagca ttttataaaa gggctttaaa agatttttct catttggtgg
     7081 gaaattgtag tttttttact gatgaaaaaa gagcgccaaa aaattcgcct ttagctttta
     7141 tgtttgtagc gcttacaaga attatcaatc ttttaaacaa tcttaaaaat actgaaggaa
     7201 ttttatatac aaaagatgat ttaaacacgc ttttgaatga agttttaaaa aacggcactc
     7261 taacttataa acaaacaaaa aagcttttgg gcttaagcga tgattatgaa tttaaaggag
     7321 aaaaaggaac ttattttatt gagtttaaaa aatataaaga atttataaaa gccctaggtg
     7381 atcatagttt aagccaagat gatttaaatg aaatagcaaa agatattacc cttataaaag
     7441 atgagattaa gcttaaaaag gctttagcaa aatacgattt aaatcaaaat caaattgata
     7501 gtttaagcaa attggaattt aaagaccatt taaatataag ttttaaagcc ttaaaactta
     7561 tcactccttt aatgcttgaa ggtaaaaaat acgatgaagc ttgtaatgag cttaatttaa
     7621 aagtagtaat caatgaagat aaaaaagatt ttttacccgc atttaatgaa acttattata
     7681 aagatgaggt aactaatcct gtagttttaa gggcgattaa agaatacaga aaggtcttaa
     7741 atgctttact taaaaaatac ggcaaagtgc ataaaataaa cattgaatta gcaagagaag
     7801 taggtaaaaa tcacagccaa agagctaaaa tagaaaaaga gcaaaatgaa aactacaagg
     7861 ccaaaaaaga cgccgagctt gagtgtgaaa aactaggctt aaaaataaat aataaaaata
     7921 ttttaaaatt aagattattt aaagaacaaa aagaattttg tgcttatagt ggagaaaaga
     7981 ttaaacttag cgatttgcaa gatgaaaaaa tgcttgaaat tgaccatatt tacccttatt
     8041 ctagaagttt tgatgattct tatatgaata aggttttagt ttttaccaag caaaatcaag
     8101 aaaagcttaa taaaaccccc tttgaagcct ttggcaatga tagtacaaaa tggcagaaaa
     8161 ttgaagtttt agcaaaaaat ttgcctacta aaaagcaaaa aagaatttta gataaaaatt
     8221 acaaagacaa agagcaaaaa gactttaaag atagaaatct aaacgatact cgctacatcg
     8281 caaggcttgt tttaaactat actaaagatt atttagattt tttaccttta agcgatgatg
     8341 aaaatacaaa gttaaatgac atacaaaaag gctcaaaagt gcatgtagaa gcaaaaagcg
     8401 gtatgcttac atcggcttta agacacactt ggggctttag cactaaagat agaaataatc
     8461 atcttcatca cgccatcgat gcggtaatta tagcttatgc aaacaactct atcgtaaagg
     8521 ctttttcaga ttttaaaaaa gagcaagaaa gcaacagtgc agaactttat gcaaaaaaaa
     8581 ttagtgaatt agattataaa aacaaaagga agttttttga gccttttagt ggttttaggc
     8641 aaaaggtttt agataaaatt gatgaaattt ttgtctcaaa acctgagaga aaaaagccaa
     8701 gcggagcctt acacgaagaa acatttagaa aagaagaaga attctatcaa tcatacggcg
     8761 gaaaagaagg agttttaaaa gccctagagc ttggtaaaat ccgcaaagta aatggtaaaa
     8821 ttgttaaaaa tggcgatatg tttagagtgg atatttttaa acacaaaaag acaaataaat
     8881 tttatgctgt gccaatttat actatggatt ttgctttaaa agtattacca aataaagccg
     8941 tggtgcaagg taaagataaa aagtcaggtc ttataaaaga ttggatttta atggatgaaa
     9001 attatgagtt ttgcttttct ttatacaaag atagtttgat tttaattcaa actaaagata
     9061 tgcaagagcc agaatttgtt tattataatg cttttacaag ctctactgtt agtttgattg
     9121 tttcaaaaca cgataataaa tttgaaacgc taagcaaaaa tcaaaaaata ttgtttaaaa
     9181 atgcaaatga aaaagaagta atcgcaaaaa gcataggaat tcaaaatcta aaagtatttg
     9241 aaaaatacat agtttcagca cttggggaag ttacaaaggc tgagtttaga caaagagaag
     9301 attttaaaaa atgagttacg atgaagcttt taaaacactg cttattagct ctaatgccaa
     9361 gctaaattta gagctaaatc atcttgtgat taagcaagat gaaaatatag ccaaattgtt
     9421 tttaaaagat ataaatatca tcgttttaga aagcttacaa ataagcatta gttccgcact
     9481 ttttaatgcc tttgcaaagt ataaaattat cttattaacc tgcgatgaaa ctcatagtat
     9541 aaatggcgtt tttactcctt ttttagggca ttttcaaagt gcaaaaatcg caaaagagca
     9601 aatgaatgta agtgctcaaa aaaaggctat tttatggcaa aaaatcatta aaaataaaat
     9661 cctaaatcaa gcctttatct taaaaaaaca caataaaata gagcaaagca atgagcttat
     9721 aaatttggct aaaaaagtaa gcttaaatga tagtaaaaat attgaagctg ttgcggcggc
     9781 gctttatttt aaaactttgt ttggtacttc tttttcaaga gatgagcttt gctttgaaaa
     9841 ttctgcttta aattatggct atgcaatcat tagggcttgt attattagag cagtttgcat
     9901 aagtgggctt ttgccttggc ttggcataaa gcacgataat atttataatt cttttgcgct
     9961 ttgtgatgat ttgatagaag tgtttagggc tagtgttgat gattgtgttt taaagcttaa
    10021 gggtgaaagt gagtttttaa gcaaagatga caaaagagcg ttgattggca atttacaaag
    10081 taaaatcaat tttgatgggc aaaattatcc tttaaacaga gcgataaatc attatgtggc
    10141 aaattttaaa aatgctttat tgtatgaaga tgaactaaag atagtgaaat ttgatgattg
    10201 aagataaatt tatgcgtgtg cttttgatgt ttgatgtgcc aactaaaagt aaaaaagagc
    10261 aaaaactagc aagtaaattt agaaataatc ttataaaatt aggttatttt atgctgcaat
    10321 ttagtgttta tatgcgtatt tgcaagggtt taagttctgc aaaaagttct attgaaaatg
    10381 taaaaaagat tttgccacct tatggaaatg taagggcttt aatcatcact gaaaagcaat
    10441 ttgataaaat ggagcttttg cttggtggca tagtttttaa cgaaaaagtt aataacgaaa
    10501 ccaatttaac gctttttgat atagatagtc atggagaatt taaatataaa aattcaaata
    10561 atgaagaaat tcaaataaac aaaaaacaag aaaaatatca tcagcaaaat ttatttgaat
    10621 tttaaaagcg gttttagggg attgtaaccc cgcagagtcc cgcaaactct ttattttagt
    10681 ccctttttaa atttcttatg agattatagc ataatttttg ctatttttca tgaaaaaacc
    10741 ccgaaatttt cattatctgg taaatatcta ttttaccata aagaaattta aaaagggact
    10801 aaaactatat ttattatccc aaatcctaaa atcaaatttt accataaaga aatttaaaaa
    10861 gggactaaaa cgtgccatca tcagattgag caaaatatcc tattttacca taaagaaatt
    10921 taaaaaggga ctaaaacagt taaattcaac taatgaaact ttggaaaatt ttaccataaa
    10981 gaaatttaaa aagggactaa aacaaaccct agtggattga aactccacta gggctaatta
    11041 ctccactaaa aggaggttgc gaatttgaaa cttattgaaa tttagggttg attaaaatcg
    11101 aaataaaatt atttaaataa ttttaaggca taaagataat atctactaaa ctttcatttt
    11161 ctaacatttc acattctttt ggcaccacca taagggcagc tttattgtta agattgttta
    11221 taatcgcact agagccttct tttttgcctt caagattggc taaaatgcgt ccatttttaa
    11281 actctatatt gcaagcgaca aattccaaat aaggtgtttt tttcttgtaa cttccttgta
    11341 aaaaggcttt gcaaatatag tctttaggtt gaagtaacca agagtttaaa atctctcttg
    11401 tgtaaagatt aaacattacc atagccgagt aaggaaaacc tggtaaggcg atgatgaatt
    11461 tttcattagc cttagctatt ttgatatgtc tacctggttt tatgtcggct ttatcgatga
    11521 tgatttcgta ttctttgatg gcttttttta aaaagtcaaa atctcccata gaaaccccgc
    11581 ccgttgtaac caaaatatca caactttgca aagcactttc aagggtggaa aaagtggctt
    11641 tctcatcatc ttttaaaaga ggaaaaaccc ttgtatcgca atttaaattt ttagctaaat
    11701 tagctatggc gatatgattt gaagagcgga tttgagcagg attttccaag gcttctccta
    11761 gatctttgat ctcacttcca ctacttaaaa cccctacaat aggttttata aacacactaa
    11821 tgtgaaaaaa tccaagttca gctaaaagag ctatctcgct ataatttaac cttgtgcctt
    11881 ttttgagtaa aatttcatct tttttatagt tttctcctac cgcacgcacg gcaaaagctt
    11941 ggggaacttt tttttctata aaaagagtat tattttctat gcgtatattt tcaacaggga
    12001 ctaaagtatc gcttccttcg ctcatgagtg agcctgtaaa ggtttttaca caagtgccat
    12061 tttgtacgct aaattgtggc atagtacccg caggtgtgag gcctaaaatt tttaaaggct
    12121 tgtcttgatc ttcaaatttg atcgcataac catccatagc cgaggttgga aattcaggct
    12181 gatttttagg ggcttttata tcttgagcta aaatgcgtcc taaacactct gtaagagcta
    12241 ttttttcaat cttttcataa gttttgatat gagaatgtaa aatttttaaa ctttcttcat
    12301 aagacattag cattttttat ccttttaaaa gtcctgcacc gcaaagcttg gttgatcttt
    12361 ctttggcata aattctttct ttgtttatca catcatactt ccaaatgggc gcacttgctt
    12421 taaaatcttc aacaaattca ttaagaagtt taagtcctaa ttttctttgt ttgcttaaaa
    12481 ttcctgcaaa atacgagctt tcatgtatcg ctacatcgcc tatagagtga gcaaaaagca
    12541 agctaatacc atcaaaatct actctttttt gccactcatc aaaccatttt tttaaaagcg
    12601 attcataaat atcaaaacta agtgcctcaa tacctccttc ttcacgcaca ataccacaaa
    12661 aagtcagtaa agcaccgcag tttttatcct tggaaaattc ataccattgg ctataaattt
    12721 taggaatatc taaagagcct tgataaagtg taaaatgttt catttagcct ccacaaactg
    12781 gcggtaaaag tgctatttta tcaccatctt ttaacttggt gttttcatta aaaatgattt
    12841 catcatttaa agatacagca caaagttcta gccattcttt taaactctca tctttttgca
    12901 aaatttcttt taattctttt aaatttttta cttcaagttc taaattttct ttatttatag
    12961 ggcctaaaaa ttccactttt accattttat tcctttactt ctaaatttcc catcattcct
    13021 aaatcttcat gttctaaaat atggcaatga tacattctaa gtcctttaaa atcttgtttc
    13081 attttaagtc ttaactcttc attaggacgc acatttatag tatctctgaa ggctctaaat
    13141 tcggcttttt gaactttgcc attgagtttt gatgagatga gttcaaattg cgtgccgtgt
    13201 atgtggaaag gatgatccat gtgagatttg tttatcacta tccagtcttc aactactcca
    13261 agcttggagc ttaaatcaat gcgttttaaa tcatagcttt tgccattgat taaaaacata
    13321 gacgcaagag cgatttttaa ttcattttca ctttttccca tcattccatg catttgcata
    13381 tgatcttcac tcatgattat ttctttaaat tccttaggtt cttctaaagg tttgaaaatt
    13441 tttaaatttt ttggaagttc taatttttct ttttttaggt taatattggc tagaaatagg
    13501 gtattagatt cttcttttac catcatttta tccctatcat aataagcact ttctagctta
    13561 aaattcccat cttttggagc gtcgattaaa acttctacac gagaagcagg acttaagaaa
    13621 agttcttctt tataaatagc tttttctata agtccaccat cagtaccaac aagtataaac
    13681 ttagctcctt gtatgcgtaa atttaaatat cttgctgcag tagcattata aatgcgtatg
    13741 cgttcgtttg tggcgagttt gattttaggt ttaaattgtc cattgatgag tacaaattct
    13801 ccttctctac catttagcca atcatttagg ttgttgtttg gaatttgagc gttttcatca
    13861 agacgcaaat cgctaatcat caaatctttt tcttttaaat gacttaaagc atcttttttt
    13921 gctttgatca caaaagcccc tgctaaaccc ataaaaactt gtttagaagc cgtataatga
    13981 ggatgtggat gataccagta agttcctgcg ctatcttgag gaatttcaaa acgatatatt
    14041 ctttcttctc ctgctaagat aggatcatgt gggcttccat cttgatcagg tggcacagga
    14101 acgccatgcc aatgtatagt tgtagcttct ttgagtttgt ttttgactaa aatttcaagt
    14161 ttatctcctt caaaaacttc tatttttgga gcaggcacga ggccattgta agtataaaat
    14221 aaggtttttt tacctttgat aagctctata tgattttctt tgatttctag ggtagcacga
    14281 aaaatatttt tttctttact ttcatttttg agtaaaggca aggcttttaa aatttctcct
    14341 tgggggaatt gttttggatc taaaagcttt aaattttttg gagcaaagtt tataaaagaa
    14401 gtatctaagt catgatttat agaatgattt ttatgcatgg agtgcatatc atgcatagga
    14461 tttgcatagg ctacacccat acttgctaga gtgagtgcat taaattttaa aaaatttctt
    14521 ctattcatta gtttttcctt ttgcttgatt ttttgtatta tagtcattat ttttttaact
    14581 ttagtaaata tttattttga aaatttggtt taattttgtt atgattttag caatttaatc
    14641 aaggaaaaat aatgttttat gaaaaaattc aaaccccagc ttatatttta gaagaagata
    14701 aattaagaaa aaattgtgag cttttagcaa gtgttggcga aaaaagtggt gctaaagtgc
    14761 ttttagcttt aaaaggtttt gctttttcag gagcgatgaa aattgttgga gaatacttaa
    14821 aaggttgtac ttgtagcgga ctttgggaag caaaatttgc taaagaatac atggataaag
    14881 aaattcatac ttattcgcct gcttttaaag aagatgaaat aggtgaaata gccagcttat
    14941 ctcatcatat agtgtttaac tctttagctc aatttcataa atttcaagct aaaacacaaa
    15001 aaaattcctt aggtcttcgt tgtaatgttg aattttctct agccccaaaa gaactttaca
    15061 atccttgtgg aagatactca agacttggaa ttcgtgctaa agattttgaa aatgtggatt
    15121 taagtaccat agaaggactt cattttcacg cactttgcga agaaagtgct ggtgctttag
    15181 aagctgtttt aaaggttttt gaagagaaat ttggcaaatg gatagggcaa atgaaatggg
    15241 tgaattttgg aggaggacat cacatcacta aaaaaggcta tgatgttgaa aagcttattg
    15301 ctttgtgtaa aaatttcagt gataaatacg gtgtgcaagt ttatcttgaa ccaggcgaag
    15361 cggtgggttg gcaaacagga aatttggtgg ctagtgtagt agatatcata gaaaatgaaa
    15421 aacaaattgc tattttagat acttcaagcg aagcgcatat gccagatact atcatcatgc
    15481 cttatacaag tgaagtttta aatgctagaa ttttagccac aagagaaaat gaaaaaattt
    15541 cagacttaaa agaaagcgaa ttttcctatt tgcttactgg aaatacttgt ttagcgggtg
    15601 atgtaatggg agaatacgcc tttgataaaa agcttaaaat cggcgataaa attgtttttt
    15661 tagatcaaat tcattacacc attgtgaaaa acacaacttt taatggtata agacttccaa
    15721 atctcatgct tttaaatgca aaaaatgaac ttcaaatgat aagagaattt tcttataagg
    15781 attattcttt aagaaattag tattatttat aatttgcata aaatgttaat tttactcgga
    15841 agagaatcaa agatgtaaat tttatgcaaa gtattttatt ttttcaaata taaaatcaac
    15901 tcaaatatct aattttcaat actttggtat gattttttaa tattttaaat ccttgtggaa
    15961 ttttattgaa attcagtgat ttttaaatca aatagtatta agataaatcg atttaaaaat
    16021 cggctttaaa atgaatatta ggtatatttt gcataatatt cattcaagca aaatttaaag
    16081 ctatttttga aaattttgaa tgcatgggag ctttaatgga tttggaaaaa ttaagattag
    16141 ctagaagtct ttattatcaa tgtctaggag agctttttgt tttttcattt tctgaagaaa
    16201 gattgtcaaa attacaagag tatttaaaga caatgcaaga atgtttattt gatgaaaatt
    16261 taaaatcaaa ttttgatatc ttgcttaagc atttagatga tgaaaattct atacaagcat
    16321 tttttaaaga atatgatttg ctttttttaa gtcttaaaaa tagcattcca acgacttttt
    16381 cttacataga agaaggtttt gaaaattcaa atcctttact ttgcgtgcgt caaattttag
    16441 tcaaaagtaa aataagacgc aatgaaaaat tttttaaaga aagtgaagat agtgttggat
    16501 tttgtttatt gttgatgagt gaatttttaa ggcaaaatga agatgattta gccaaagagc
    16561 tttttgaaaa agtgatcaat aaaagcattg atgagttttt aggcgatgtt ttcatgaata
    16621 aaaatgcgaa tttatataag gaaattgcaa gtattgcatc ggcttttatg gaatttgaaa
    16681 gactttgctt tgaagtggaa aaacctgcaa aaataaattc taaaaaagtg caaaacgatc
    16741 tatcgcgttc agaattttta agaagagaag caaataaaca aaggaggact cgtgaaaaat
    16801 cgcagggaat ttcttaaaaa atccgctttt gccttagggg ctgctggagt gcttggtagc
    16861 acaactttag ctctagctaa agatgaagaa agaaaagatt tagttaaagg taaaagtaag
    16921 aaaaaagaag tgctttttca aagaagtgct aattgggaaa attattatat aaaggctgag
    16981 taatgtcaag tgtaggtgaa aatatcaagc ttacgcgtcg ttcttttctt aaaatggcag
    17041 cactttcaag cctagcaaca ccgttgcttg ctagaagtga aactttaaga gaagcgagtg
    17101 ctgatgagct taaagaagct tatgaaggta gtaaaaaagt aaaaacagtt tgtacagcct
    17161 gttctgtagg ctgtgggatt attgcagaag tgcaaaatgg tgtttgggtg cgtcaagaaa
    17221 tcgctcaaga tcatcctgtg agttcaggtg gacattgctg caagggatct gatatgatcg
    17281 atatggtgcg ttcacatgtg cgtttaaaat atcctatgaa aaaagaaaat ggagaatgga
    17341 aacgcataag ttatgagcaa gctttaagtg agatcggaga aaaactagct gcttatcgta
    17401 aagaaaatcc tgaaagtgtt atgtttttag gttctgcaaa acttaataat gaacaagctt
    17461 attatataag aaaatttgca gcattttttg gaacgaacaa tgtagatcat caagctagaa
    17521 tttgacacag cgcaacagtc gccggtgtgg cgaatacatt tggttatggc gctatgacaa
    17581 accatcttgg agacatccaa agaagtaaat gtatcattat cattggagca aatccagcgg
    17641 taaatcaccc tgtgggtttt agacatttct taaaagcaaa agaaaaaggt gcaaagctta
    17701 tcgttgtaga tcctagattt acaaaaagtg cagcaaaagc ggatatttat gcaagaattc
    17761 gtccaggaac tgacattgct ttcatgtatg gaatgttaaa aatcattttt gatgaaggct
    17821 tggaagatac aaaatatctt gatgaaagag tttttggaat tgataaaatt cgtgaagaag
    17881 cagcaaaatg gacagttgaa gaagtggaaa atgttacagg gatctctaaa gaacttttgg
    17941 tgcaaatcac tcacgaagta gctaaaaaca aaccaactac gcttatttgg gctatgggtt
    18001 taactcaaca tactgtagga acttcaaata cacgtttagc acctattgtg caaatggtac
    18061 ttggaaatat aggtaaattt ggtggtggag ttaatatctt acgcggacac gataatgttc
    18121 aaggtgcttc agatatggct tgtttgagcg aaaatttacc aggttattat cctttaaatg
    18181 aagcgacttg gagatactat gccaaaattt ggggtgtgga ttatgagtgg cttttaggaa
    18241 attttgtaag caaagattgg atgcataaaa ctgggctttc acttgctaga tggtgggcag
    18301 cggctttaaa tggaaaagat ggaaatgatg ctatcgataa tgcaggaacg cctttaaaag
    18361 ctttagtagt tatgggaaat ggtattactt cgactgcaca acaagtaaaa gttaaagaag
    18421 gtttggaagc tttagagctt ttagttttag ccgatccttt tgtaaatgaa gcagggatta
    18481 ttgcagaaag aaaagatgga atttatcttt tacctgcagc aacacagttt gaaacaagcg
    18541 gaagtgtaac agcaacaaat cgtagcggac aatggagatt taaagttgta gatccacttt
    18601 atgaaagcat ggaagatcaa gaaattttat ttgagcttgc taaaaaatta ggtttttatg
    18661 aagactttac caagacttta cgcgatgaaa aaggtgagat tgtttggcct gaaaatgcaa
    18721 caagagaaat tgcaaaagca gttagaagta tagggcttaa tggttggagt cctgaaaggc
    18781 ttaaaaagca tactttatac tgggataaat ttgatgaggt aactttagaa ggaaaagacg
    18841 aagttgctgg cgagtattac gggcttcctt ggccttgttg gagtgataag cacccaggtt
    18901 ctcctgtgct ttataatacc gacattgaag tagcaaaagg tggtatgggc tttagaaaca
    18961 attttggact tgaatatgaa ggagagagtt tacttgctaa gaatgcacct ttaaattcac
    19021 ctattgatac aggttatcca caaattacta aagataatat agaaaaagtt ttaggtatta
    19081 ctttaagtgc tcaagaaaaa gaaaaaatgg gatcaacttg gtcttatgat gatagcaata
    19141 tcatagcaac taaatgtata gaaaaaggca tagttcctta tggaaatgct aaagctagag
    19201 ctgtagtttg gacttttaaa gataaaattc cactccaccg tgagccttta cattctccaa
    19261 gaaacgattt ggtgcaaaaa tatccaagtt ttgaagatca aaaagcgctt taccgcgtgg
    19321 atactaaatt tgtttctgtg caacaagcta aggattattc taaagaattc ccgcttaatc
    19381 ttgttactgc aagacttgtg aatttaaatg gtgcaggtat ggaaaataga gcatctatgt
    19441 atctaacgcg tttaacacct gaaatgtttt gtgagatcaa tcctgaatta gcaaaagagc
    19501 aagacattaa agcaggagat atgatttggg tgcattctcc agaaggtact aaaattcatg
    19561 taagagtgaa ggttaatcca ggtgtagcaa aagatatgat tttcttgcct ttccatttta
    19621 caggagttat gcaaggcgtg gatttaacgc acaatttccc agaaggaact aagccttatg
    19681 caagcggaga aagtgctaat acggtaacaa attatggtta tgatatcatg tgtcagattc
    19741 cagagactaa aggtggactt tgtagaatca gtaaggatgg aaaatgagta aggtaaattt
    19801 tgcaaattta gaaaaagaac gcttgaaatt cttttgtgat aatgagcgtt gtattgattg
    19861 taatggttgc gcggtagctt gtgatgaagc acatgagctt cctattcata ttcgccgccg
    19921 ccgtgtgatt actttaaatg aaggaattca aggaaaagaa gtttcaactt ctatttcttg
    19981 tatgcattgt gatgatgctc cttgttctat cgtttgtcct gtggattgtt tttacatccg
    20041 tgctgatggt attgttttgc atgataaaga aatttgcata ggttgtggat attgtcttta
    20101 tgcttgtcct tttggtgcac cacaatttcc aaaagatagt gtttttggaa ataaaggcat
    20161 tatggataaa tgtactatgt gtgcaggtgg ccctgaagca acgaattcag aaaaagaaag
    20221 agaactttat ggtcaaaatc gtatcgcaga aggaaaagtc cctgtatgtg ctgcgatgtg
    20281 ttcgacaaaa gcacttttag taggtgaaag ttctaaaata gaagagattt atcataatag
    20341 acttatgaat agaaattatg gcattccaaa tccttcggaa agtttggaat ggaagattgc
    20401 ttacacagga aaggaacgct tatgagaaaa gtatttgtaa cgcttttatt aagcgtagtg
    20461 agtttatttg cttatggtag cgagagaatg ggacaagata ctcaaatttg ggattttcat
    20521 cgtattacaa atatcccaaa ttatgatact tttggcaaac tttggacaac tttgcaaggt
    20581 gaatatatag ctactatagc tttaatcgct gttattgcgg tattgtctgc atttgctttg
    20641 cattatatgg ttataggacc taagcaattt tcacacgatg gaaagaaaat ttatgctttt
    20701 acattatttg aaagactttt tcattttatc gcagcgattt cttgggtgat tttagtgcca
    20761 actggttttg tgatgatgtt tggagaagtt tttgggggtg gagtttttgt aagggtttgt
    20821 aaaaatttac acgcttttgc aacgattttg tttatcatct ctataatccc tatgttttta
    20881 tgctggatta aaagaatgct tcctgcaagt tatgatatca gatggatgat gatagtaggt
    20941 ggttatttaa gtaaaatcaa acgtcctgta cctgcaggta agtttaattt tggtcaaaaa
    21001 tcttggtatt atatagctgt atttggtgga tttttgatga taattacagg tggatttatg
    21061 tattttcttg attttaattc cacggcaatt caaggtcttt ttggtttaac tcaaattgaa
    21121 cttttgagaa tttcagctat agtgcataat ttcttgggta tagtgtgtgc agtgtttttt
    21181 ggtgtgcata tttatatggc agtatttgca atcaaaggta gtatccattc tatgattagt
    21241 ggttataaag aagaagaaga ggtttatatt ttacattctt attggtataa agaattaagc
    21301 aataaaaagc aaattgaacc tagtttttct tatgatccta atgtgaaaat ttaatcttta
    21361 accgctatgt tattacatag cggtagtttt aagctttttt gaaataaata gaacgaattt
    21421 tcttttataa gttgaatcta aaatctattt ttccatatat aaatttgtta tttatgtttt
    21481 tttgatataa tattatttaa agatatttaa aggataaggt atggatccgt tatttacaac
    21541 tcaaatttta aaatataaag gtgatgaatc ttttacatgc aatgatactt tagtgcgtga
    21601 aattaagctt gaaattttta ttaatgatga aaaagtaggt gctttaatgg caactcctgt
    21661 agatgaacag gcattagcaa taggatattt aatgagtgaa aatatcattg cgaaagtaag
    21721 cgatattgag agcatagaaa caaaagatga tggtatgagt gtgcatatta aagcaaagat
    21781 tgataaagaa aatttagcaa agcttaatgc tgaaggtgta gttataagtg gttgcggtag
    21841 agcacatact gccaatatcg atccagaagc tattgaagcg agtaaaatta gttctgatgc
    21901 aaaatttagc aaagatgaaa ttttaaaaca aatgagtact ttttatactc aatgcgagct
    21961 ttacgagaaa acaggctgtg tacatacggc taagcttttt gtagatgaga aaactttttt
    22021 tataggtgaa gatatagctc agcataatac catagataaa gctttaggaa aagcgtgttt
    22081 agctggggtt gatttaagtc aatgtttttt aatggttagt ggaaggctaa gttctgaaat
    22141 ggtagctaaa gcagttatgc ataaaattcc agtgcttgtt tcacgcacgg ctcctacttg
    22201 tttaggggtt atgatagcaa gaaaatttga tttaacgctt tgtggttttg ctagagaaaa
    22261 taagatcaat atttatagtg gagaatttag aattcatgga taaaaatcaa gaaaaagaaa
    22321 tcatctcata tatgagagaa ttgttaaata gcaatgaaaa attagattgt ggtacggctt
    22381 ttaaaattgc aaagaaattt aatataaata tagaaaaaat cggacaatta gccgatgaaa
    22441 atcacatgag aattgataat tgcgagttgg ggcaatttgg acatttagat tttgaaaaag
    22501 caaagattga agtgcttaaa aaaatagaac ctagtttaga tgaaaagcgt agaatttttt
    22561 gtaaagatgc aagagatatt gctaaagaag gttgtggact taaaagtatg cgttcagctt
    22621 taaaaactta taaggttgat gtaaagtatt gtcaacttgg ttgttttaaa gaaaaaaaag
    22681 gtaagcaatt tatagtaaga acaaaaactt ggattgaaaa tgcggatgga gatttgcttt
    22741 ttggtcgagg aaaaacagaa cttttagaac ttatcggaca aacaggtagt ttattacatg
    22801 cttctaaact tatggggatt aattataaaa aagcttggat gcatttacaa accttacaaa
    22861 aaaattctca agaaatttta gttagcacaa gacaaggacg ctctaaagaa tcaggaacaa
    22921 aacttactcc tagagctatg gaattgatgg aaaattactc tattttgcaa aaagacatag
    22981 aagaatacgc taataaacgc tttaaagaat tgtttt
//
LOCUS       DAPIVO010000021        22980 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.021, whole genome shotgun sequence.
ACCESSION   DAPIVO010000021 DAPIVO010000000
VERSION     DAPIVO010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22980)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22980)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22980
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.021"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            24..1046
                     /locus_tag="RJ239_000766"
     CDS             24..1046
                     /locus_tag="RJ239_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330897.1"
                     /translation="MNLKIFSIIVGILIAVIVILGGTYYYLFEYSKPKNYTLNTNTYT
                     EQKSYTNNYDNPYSPSIQTNNSSSNVNTNNNTIQKQETNPLLDENQSLNNDTFNISIS
                     ENNQSLNNDTNTSNNINTNENKQILDTDKEKLKQENKQAKIEALKKEISKQQKILERE
                     RAIKKELQSNKSNKNKYLNTAREYLSIGKNSRLEPELSTENMKVYILDGKFLSQYRIN
                     LLKDMLSIIQDNAKDYYLSIFVKMLPKGEMKLTIYNKEIIFSDMKKAYKYISLDRLSP
                     YLNNPKELNEHVAREEILERLKLQIKKDGKGSDFSKHIKSLKTGLNTAQYFFPFCEII
                     EISSIK"
     gene            1069..3681
                     /locus_tag="RJ239_000767"
     CDS             1069..3681
                     /locus_tag="RJ239_000767"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HDV7330898.1"
                     /translation="MYDKNLEKEYYQICEERGYFEIDGNKTIQEKDKNFCIMMPPPNV
                     TGVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNVVEKQLLAQGIKKE
                     ELGREEFIEKVWEWKEQSGGKILDQMRTLGITPAWSRLRFTMDEGLVNAVKKAFVELY
                     DKRLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKYFLKDSDEFLVVATTRPET
                     FFGDTAVMVHPDDERYAKFVDKEVILPISKKAIKIIADKHVEKEFGTGVVKVTPAHDM
                     NDYEVGLRHNLDFISVFDEKGILNEHCLEFQGLERLEAREKIVAKLESLGFIEKIEEY
                     NNQIGYCYRCNNIVEPYISKQWFVKKEIAQESIEKVALGESKFYPNHWINSFNAWMKD
                     LRDWCISRQLWWGHQIPVYYCECSHEWASQHTPKTCPKCQSQNFKQDEDVLDTWFSSG
                     LWAMSTLGWGNENWGKDKIWSEKDLKDFYPNSLLITGFDILFFWVARMMFQSTNVLHQ
                     LPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQGRDIKL
                     SNDKLLQVRNFTNKIYNAKNYLLLNESKFEDLENITLHSELAKYIYAKFQTCVKDVRE
                     NLDNYRFNDAANTLYKFFWDDFCDWGIELSKAEKSSVKELGSIFKEALKLLNPFMPFI
                     SEYLYHKLSDTELKTSPSIMISKYPKFKEQDKNIEKIFSLLIESIVSIRRAKSLIDLG
                     NSKIEKAYIKFNDKKIKDEIKAYMNFIIMLAKCEQIEFSEEKLPKAICDVSENLEIFI
                     TLENVDLSGILTRLENQKNKLEKESFKLNSMLSNEKFIANAPKEVVEQNKEALENLKI
                     QLEKISVELQNLRG"
     gene            3686..4696
                     /locus_tag="RJ239_000768"
     CDS             3686..4696
                     /locus_tag="RJ239_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HDV7330899.1"
                     /translation="MIKIKNLKKYYGKELVINDVSLEIKKGEIYAIVGHSGAGKSTLL
                     RCINGLENYQEGSLKVFDQEIKDLSQKKSKELRMLRKDIGMIFQNFALMERKNVFENV
                     AMPLRTHYTQCKFHAKLFNKEYMSEKEIAQKVNSLLEIVGLDHKNKSYPRELSGGQKQ
                     RVAIARALALNPKILLSDEATSALDPNTTKNILELISKINAEFGITVVLVTHEMDVVK
                     DIAQKALLLEHGQIIGSGAIDELFLRPNAKMKEFLGESDFLPEHGLNIKLYFPKEVAQ
                     NSVITHMARTLNIDFNIVWGKIEKLNGKALGNLVININEKDKDKVLDYIEKSGVLWEV
                     AS"
     gene            4693..5604
                     /locus_tag="RJ239_000769"
     CDS             4693..5604
                     /locus_tag="RJ239_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7330900.1"
                     /translation="MNEENISIVSAFFSRISQFFNEFSWQDIKEVSLSSITSFNENYE
                     NILKPALNETIYMSLMAVLFGFLLAIIPGILLAIWDKNGIKENKIAYSILDFITNILR
                     AFPFLILIVVLLPLSKIIVGTSIGTNAAIVPLAIGIAPYLAKMLESAFKEIDKGIIEA
                     AKSYGASNIQIIFKVIFSEALPAIISGITLTLIFTIGFSALAGTVGGGGLGDVAIRYG
                     YERFNKEVMIQTVVILLILVQLVQILGNLFYTWAKNSKTTYIIATLLILLGVSIVINI
                     NNDENFFWQVIVFILFLGSLLYKGFKK"
     gene            5794..6567
                     /locus_tag="RJ239_000770"
     CDS             5794..6567
                     /locus_tag="RJ239_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDV7330901.1"
                     /translation="MKIKSLFIASILTLSLNANALETITVAATPVPHAEILEQVKPDL
                     EKQGYKLEIKEFTDYVLPNLAVDNGEADANFFQHTPYLEEFNKNKGTKLIKVAAIHIE
                     PMAVYSKKYKSLDDIKEGVKIAIPNDPTNESRALDIIAKKGLVKFKDKALKTPLDIID
                     NPKKIKFVELKPAQLPRALNDVDFAVINSNYALSANLNPAKDSVFIEDKESPYANILV
                     VRVGHENDPKIKALIQALQSDKIKQFIIEKYNGSVLPAF"
     gene            6616..7386
                     /locus_tag="RJ239_000771"
     CDS             6616..7386
                     /locus_tag="RJ239_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDV7330902.1"
                     /translation="MNLFKIIILACILNLSSLFAQNITIGATPNPFGSLLELMKDDFK
                     NKGYELKIVEFSDYILPNRALEEKELDANLYQHKPFLEEYNLKKGSNLIATTPVLIAP
                     VGVYSKKIKNLENLKEGARVAIPNDATNESRALELLEKAKLIELNKNTLKTPLDINKN
                     PKKLKFIELKAAQLPRALDDVDIAIINSNFALGAGLNPSKDTIFREDKNSPYVNYVVV
                     RSEGKNSEKTKVIDEILRSDKFKAIINEHYKDILIPAF"
     gene            7396..8172
                     /locus_tag="RJ239_000772"
     CDS             7396..8172
                     /locus_tag="RJ239_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDV7330903.1"
                     /translation="MNIKKIFLSVLFTISLSFGADKTIIIGATPTPYAEILNFSKPLF
                     QEKGWKLIVKEFNDYNIPNIALNEKDLDANLYQHKPFLDDFNTHKGTKLSSLGAIVLV
                     PMAIYSNSIKDIKDIPNGAKIAIPNDATNESRALDLLAKANLIEFKSQSTLKTPIDIS
                     KNPKKLKFIELKAAQLPRALNDTDLAIITTNYALGAGLNPLKDGIFMEDKDSLYAIVL
                     ATRKGEETSQKSLVIKEILTSDKIKNFIIEKYKGSVIPTF"
     gene            8256..8918
                     /gene="flgA"
                     /locus_tag="RJ239_000773"
     CDS             8256..8918
                     /gene="flgA"
                     /locus_tag="RJ239_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation protein
                     FlgA"
                     /protein_id="HDV7330904.1"
                     /translation="MKIIFLTFFIVINYIQAASLEEIKTALAKEFRNNFPKIIISQID
                     LKITSLPKDFDQYEFLRIANGRFNQAQGFLRAEFKTPQNIQKNVFFRYFIQANLEVLK
                     SERAIKRGDKLGAFDYKSVLIDFDKVPLNALTLDDVDNLVAKSNINKNAILRANMFKT
                     TALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKEGKVMQGIVVGKNRMI
                     IQ"
     gene            8915..9478
                     /locus_tag="RJ239_000774"
     CDS             8915..9478
                     /locus_tag="RJ239_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HDV7330905.1"
                     /translation="MKVLLGISGSSSVNLGLKLLKNLENQCELYCILTQGAKLNFKTE
                     NQANLEEICQENFKYTHFLDDKNLSLSVASGSFGIEKTIIAPCSISSLAKIHAGFADT
                     LLMRAAAVALKERKKLILGVREMPFSTLNLEHMLKLSQMGVIIAPPIIASYSKANNLE
                     QMENFIAGKWLDLLEIKHNLYEKWQNF"
     gene            9518..9994
                     /gene="coaD"
                     /locus_tag="RJ239_000775"
     CDS             9518..9994
                     /gene="coaD"
                     /locus_tag="RJ239_000775"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HDV7330906.1"
                     /translation="MTCLYPGTFDPITNGHLDVIKRALKIFDEVIVAIAKSEHKKPCY
                     DLEKRKELALLATQNLKNVKIIAFDNLLVDLAKELKVNTIIRGLRAVSDFEYELQIGY
                     ANHALWEDMETIYLMPSLKHAFISSSIVRSIVAHGGDVSSLVPKEILPFLKDQSCM"
     gene            9985..10563
                     /locus_tag="RJ239_000776"
     CDS             9985..10563
                     /locus_tag="RJ239_000776"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HDV7330907.1"
                     /translation="MYVVFEGIDCVGKSTQISLLKEIYKDAIFTLEPGGTELGKHLRE
                     ILLNKTHPINKRAELLLFLADRAQHFEEILKTNQNKLIISDRSFISGMAYAKDFENDL
                     LFALNSFALENFFPQKIIFLKGDANLIQERLSQKELDSIEKRGIEYFLSVQDKLEKVL
                     HFLKEKISVEILTLDAKESKEKLHQQIKEFLQ"
     gene            10560..11786
                     /locus_tag="RJ239_000777"
     CDS             10560..11786
                     /locus_tag="RJ239_000777"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HDV7330908.1"
                     /translation="MINALKGMKDLLDKDAYYYEKVIKICEEVAKNYGFTFINTPHLE
                     LCTLFKRSVGESSDIVGKEMYEFIDKGENHVCMRPEGTAGVVRAYIEKKLDKNTSVKR
                     WFYYGSMFRYERPQKGRLREFHQFGVESLGIPNVYEDASIILMLVEIFSRLGIDFKLQ
                     LNSLGCSQCLPKYRDRLVEFLDSKEGFCEDCLRRKNLNPIRVLDCKNEHCQNLLENAP
                     LLINNLCTSCQKDFETLQQILKDNGVKFELDSKLVRGLDYYSKTAFEFISDEIGAKAA
                     IAGGGRYDRLIEYLGGKSGYGIGFAMGIERIITILEQKEEKIQREGIYLCAMDEIYIQ
                     KLLHIATNLRKEYKVLLSYEARKLAKHLENADKNNTEIFLCMGENEAQNESLFYKNLA
                     KKEEKMIKISDLKKVL"
     gene            11783..13618
                     /gene="speA"
                     /locus_tag="RJ239_000778"
     CDS             11783..13618
                     /gene="speA"
                     /locus_tag="RJ239_000778"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HDV7330909.1"
                     /translation="MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIVKELRDDGYK
                     GPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGK
                     DYNYGLEAGSKAELLLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGL
                     NELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLL
                     KENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLA
                     VEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIA
                     PVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLF
                     DLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSM
                     PDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKEN
                     YFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDYD
                     IHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV"
     gene            13619..14257
                     /gene="cysE"
                     /locus_tag="RJ239_000779"
     CDS             13619..14257
                     /gene="cysE"
                     /locus_tag="RJ239_000779"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HDV7330910.1"
                     /translation="MNFWGIIKEDFSQPKAQDPAFNSCIELFFNYPGVWAVVNYRFAH
                     FFYIRNFKRIARMISGISQFLTGVDLHPGAELGRRIFIDHANGVVIGQTAIIEDDVLI
                     YQGVTLGGTSLEKGTKRHPTIKKGVIIGSGAKVLGNITIGENAKIGSNAVVVKDIGAN
                     LTAVGIPAYIIEERKNKNIRAIDANCDDKLEKLEKKILELENLILKQPESQK"
     gene            14429..15598
                     /locus_tag="RJ239_000780"
     CDS             14429..15598
                     /locus_tag="RJ239_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HDV7330911.1"
                     /translation="MLTKRSQVLEESITLAITALANELKAKGEDIISFSAGEPDFDTP
                     QTIKNAAISAIEKGCGKYTAVAGIPEVLKAIQTKFKKDNNLDYETNEIITNVGAKHSL
                     FECIECLVEKDDEVIIPSPYWVSYPEMVKFAGGKPVFIEGLEENGFKITAEQLKKAIT
                     AKTKVLMLNSPSNPVGSIYSKEELTQIAKVLEGTQITVLSDEMYEKLRYDGFDFVAFA
                     SVSKDALKRTVTINGLSKCGAMPGWRFGYMASKNKALISAVKRLQGQSTSNICSITQH
                     AAIPALNGECDKDIEKMRQAFEKRRNLALDILKQIPNISVYKPEGAFYLFVNIQKIEK
                     DSMKFCQKLLEQEKVAVVPGVGFGMDGYFRLSYATSDELIKKGLERIANFIKNYK"
     gene            complement(15648..15989)
                     /locus_tag="RJ239_000781"
     CDS             complement(15648..15989)
                     /locus_tag="RJ239_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HDV7330912.1"
                     /translation="MKIIQWNGAEFSPKEVKINVLIDNEKGKEIQILLAKDSVMKEHK
                     APFAIHVQVLSGKIWFEVEKEKFELNALDMISLEANVAHSLGGLENSIIRLSLNKSDS
                     VQRVNAVLKKP"
     gene            complement(16059..17081)
                     /locus_tag="RJ239_000782"
     CDS             complement(16059..17081)
                     /locus_tag="RJ239_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDV7330913.1"
                     /translation="MNLSFKIFDISNTQRSKAKKVQGKKYEIFLNENEHSLITPKVSF
                     KEILRYYYLYPKNAIPSFKLPFFKPDLSGFSTPHITWLGHSSLFISFKEYKILIDPIF
                     NTHASPISFINKAFKNAPVYNINDFNEIFAVIITHSHFDHLDAKSVKALKDKAKFFIT
                     PLKVGNYLKSYGVSEKKIIELDWWSGIEFGDLKIMATPAQHSSSRGDGKNKTLWASFV
                     MEFLSVDKRVFFSADGGYFTHFKKIGEYFGSFDLACLESGQFNIAWPYSHSFPEQILK
                     EAKDLNAKAVMPIHWGRFLAGTHAWNEVVKFLYENLDLPLITPKMGEAYEVGAKFKQD
                     FWWKEE"
     gene            complement(17341..19212)
                     /gene="dnaK"
                     /locus_tag="RJ239_000783"
     CDS             complement(17341..19212)
                     /gene="dnaK"
                     /locus_tag="RJ239_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HDV7330914.1"
                     /translation="MSKVIGIDLGTTNSCVAVYERGESKVIPNKEGKNTTPSVVAFTD
                     KGEVLVGDSAKRQAVTNPEKTIYSIKRIMGLMINEDAAKEAKNRLPYHITERNGACAI
                     EIAGKIYTPQEISAKVLMKLKEDAEAFLGESVTDAVITVPAYFNDAQRKATKEAGTIA
                     GLNVLRIINEPTSAALAYGLDKKDSEKIVVYDLGGGTFDVTVLETGDNVVEVLATGGN
                     AFLGGDDFDNKLIDFLANEFKDETGIDLKNDVMALQRLKEAAENAKKELSSANETEIN
                     LPFITADASGPKHLVKKLTRAKFEGMIDSLVAETITKINEVVSDAGLKKDEIKEIVMV
                     GGSTRVPLVQEEVKKAFNKDLNKSVNPDEVVAIGAAIQGAVIKGDVKDVLLLDVTPLS
                     LGIETLGGVMTKIIEKGTTIPTKKEQVFSTAEDNQSAVTINVLQGEREFSRDNKSLGN
                     FNLEGIPPAPRGMPQIEVTFDIDANGILTVSAKDKATGKAQEIKITGSSGLSEEEINN
                     MVKDAELHKEEDKKRKEAVDARNAADSLAHQVEKSLSELGEKVAAADKENIQKALDDL
                     RETLKNQNASKEEIESKMKALSEVSHKLAENMYKKDEPNTANDKKKKDDDVIDAEVE"
     gene            complement(19234..19764)
                     /gene="grpE"
                     /locus_tag="RJ239_000784"
     CDS             complement(19234..19764)
                     /gene="grpE"
                     /locus_tag="RJ239_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HDV7330915.1"
                     /translation="MSEQKQEFENENAENSEHLQDENLQNIEDVEQNKLQKDYDELKD
                     KYMRANAEFENIKKRMEKEKLSAMAYANESFAKDLLDVLDALEAAVNVECQDEISLKI
                     KEGVQNTLDLFLKKLEKHGVALIKDEKEFDPNLHEAMFHVDSENHQSGEVVQVLQKGY
                     KIADRVIRPTKVSVAK"
     gene            complement(19761..20552)
                     /locus_tag="RJ239_000785"
     CDS             complement(19761..20552)
                     /locus_tag="RJ239_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HrcA family transcriptional regulator"
                     /protein_id="HDV7330916.1"
                     /translation="MKSRDKKDLILESIIQTYLLDNAPIGSNELNSNLCIPASTIRVY
                     LKRLSDEGLITQLHISSGRIPTILTMQNYWQSFWEKEQDKNIHIKNESFLKELSKEFE
                     IYCLVYGGRSLVLKEVLDLNTKFIVLDFEDEELVLKYEKEAWNFLQSLIGLDLSSIEK
                     IALRVHFIDLVEKIASLRQNLICYRSNEERAYQIYQNDEFVKLLDCQIHRHFKESLEF
                     EPLFKEGFMGLKVDAQFLGEDVNIILAGSVYTDYKKILQYIKEAA"
     gene            complement(20855..22945)
                     /gene="cfrA"
                     /locus_tag="RJ239_000786"
     CDS             complement(20855..22945)
                     /gene="cfrA"
                     /locus_tag="RJ239_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent ferric enterobactin receptor
                     CfrA"
                     /protein_id="HDV7330917.1"
                     /translation="MKKICLSVCAIGLLSSYAISQNVELDSSIVSASGFTQDIKEAPA
                     TINVISKKELQSKPYRDVAEAIADIPGVDLYASKGKTGSYNITMRGITGYTLVLIDGR
                     RQGIGGEVGPNGFNEISNSFLPPISSIERIEVIKGPMSTLYGSEALGGVVNIITKKVS
                     DKWETSVSLDALLNENKDWGNTYGTSIYSSGPLMNDKLGLTLRFREFYRQQSNVEFTN
                     GSGQRVQGDQAQSPTKANNFNIGTRISYLANDYNTFIFDIDFSRNHYDNKQGQLGTIT
                     SPGSAPDSLTGGYADIMEVDKFVTYLSHEGVYENFSITSGLQYNRVSNNGREVVGQAN
                     QPFLGQNRDIVAEDIILDTKSVIPLGQSHILSAGGEYRLEKMQDKIANPTNFDQYLLA
                     IFAEDEYSIKDNLRLTFGARYNHHEIFGNNISPRAYLVYNPTDELTLKGGVSTGFRTP
                     YANRLINGAYNYSGQGRFPIYGNPDLKEETSLNYEIAAIYNNDLFYVSATGFLTNFKD
                     KISTQRYDKGNMIPGIGTCDADRCFKAINHGKVEYKGIELGAGISPLDNLNVNFAYTY
                     LDSEVKEAQDKSVIGKPEQDSLKHNIMLKTEYSFYNKITPWIKGEWQIDRYMGDTNIN
                     REYYKDIFFASMGVRYDINKQWSINAAIYNLFNKSFTDGWESYQNSGAPTWVNTYNRI
                     EEGRRMYISINGSF"
BASE COUNT         8269 a         3636 c         3553 g         7522 t
ORIGIN      
        1 tttctatttt taagggatag caaatgaatt tgaaaatttt ttctattatt gttggcatat
       61 taattgctgt tattgtaata ttaggtggaa cctattatta tctttttgaa tattcaaaac
      121 caaagaatta caccttaaat accaacactt acaccgaaca aaaatcgtat accaataact
      181 acgataatcc ctattcaccc tcgatccaaa ccaacaatag ttcatcaaat gtaaatacta
      241 acaacaatac catccaaaag caagaaacaa acccattatt agatgaaaat caaagcttaa
      301 ataacgatac atttaatata tcaataagcg aaaacaatca aagcttaaat aatgacacca
      361 atacaagtaa taatattaat acaaatgaaa ataagcaaat tttagatacg gataaagaaa
      421 aattaaaaca agaaaataaa caagccaaaa tagaagctct taaaaaagaa atcagcaaac
      481 agcaaaagat cttagaaaga gaaagagcta taaaaaaaga acttcaatca aacaaatcaa
      541 acaaaaataa atatctaaat accgctagag agtatctaag cataggaaaa aacagtcgtt
      601 tagaacctga gcttagcaca gaaaatatga aagtttatat tttagatgga aaatttttaa
      661 gccaatacag aatcaatctg ttaaaagata tgctaagcat tatacaagat aatgcaaaag
      721 attattatct aagtattttt gttaaaatgc taccaaaagg ggaaatgaaa ttaactatct
      781 ataacaaaga aattatcttt tcagatatga aaaaagctta taaatatatt agtttagata
      841 gattaagccc atatttaaac aatccaaaag aattaaatga acatgtagca cgtgaagaaa
      901 ttttagaaag acttaaactt caaattaaaa aagatggcaa aggaagtgat ttttctaaac
      961 atatcaaaag tttgaaaact ggacttaata cagcacaata tttcttcccg ttttgtgaaa
     1021 ttatagaaat tagctctatt aaataagcta aaacaataaa ggcaaataat gtatgataaa
     1081 aatttagaaa aagagtatta tcaaatttgc gaagaacgcg gatattttga aatcgatggc
     1141 aataaaacca tacaagaaaa agataaaaat ttctgcatta tgatgcctcc tcctaatgtc
     1201 actggagttt tacacatagg acatgcttta acttttactc tacaagatat tatgacgcgt
     1261 tataaaagaa tggatggcta taaggttctt tatcaaccag ggcttgatca cgcaggtatt
     1321 gccactcaaa atgttgtaga aaaacaactc cttgctcaag gcattaaaaa agaagaacta
     1381 ggtagagagg aatttataga aaaagtctgg gagtggaaag agcaaagcgg tggaaaaatt
     1441 ttagaccaaa tgagaacact aggcatcact cctgcatgga gtcgcttgcg ttttactatg
     1501 gatgaaggtt tggttaatgc cgtaaaaaaa gcctttgtag aactttatga taaaagactt
     1561 attgtacgtg gaaactacat gataaattgg tgtactcatg atggcgcttt aagtgatata
     1621 gaagttgaat acaaagaaaa caaaggaaaa ctttatcata ttaaatactt tttaaaagat
     1681 agcgatgaat ttttagtagt agccacaacg cgtcctgaaa ctttttttgg cgatactgca
     1741 gttatggtgc atcctgatga tgaacgctat gctaaatttg tggacaaaga agtgattttg
     1801 cctataagca aaaaagccat taaaatcata gccgataaac atgtagaaaa agaatttgga
     1861 acaggagttg taaaagttac tcccgctcat gacatgaacg attatgaagt aggacttaga
     1921 cataatttag attttataag tgtttttgat gaaaaaggaa ttttaaacga gcattgttta
     1981 gagtttcaag gtttagaacg cttagaagca agagaaaaaa tcgtagccaa acttgaaagt
     2041 cttggtttta tagaaaaaat agaagagtat aacaatcaaa taggatattg ttatcgttgc
     2101 aacaatatag ttgaacctta tatctccaaa caatggtttg taaaaaaaga aatcgcccaa
     2161 gaaagtatag aaaaagttgc gcttggagaa agtaaatttt acccaaatca ctggataaat
     2221 agctttaatg cttggatgaa agatttaaga gattggtgta tttcaagaca actttggtgg
     2281 gggcatcaaa ttcctgtgta ttattgcgaa tgctctcatg aatgggcaag ccaacatacg
     2341 cctaaaactt gtccaaaatg tcaaagtcaa aatttcaaac aagatgaaga tgtgcttgat
     2401 acttggtttt cttcaggact ttgggctatg agtactctag gctggggaaa tgaaaattgg
     2461 ggtaaagata aaatttggtc tgaaaaggat ttaaaagatt tttatcccaa ttctttactc
     2521 attacaggtt ttgatatttt atttttctgg gtggctagaa tgatgtttca aagcaccaat
     2581 gtcttacatc aacttccttt taaagatatt tatttacatg ctcttgtgaa agatgagcaa
     2641 ggtagaaaaa tgagtaaaag ccttggaaat gttatcgacc caaatgaaag cattaaagaa
     2701 tatagtgctg atattttacg ctttacttta gcacttcttg ctatacaagg acgcgatatt
     2761 aaacttagca atgataaact tttacaagtt agaaatttta caaataaaat ttataatgct
     2821 aaaaattatc tgcttttaaa tgaaagtaaa tttgaagatt tggaaaatat cacacttcat
     2881 tcagaattag caaaatatat ttatgccaaa tttcaaactt gtgttaagga tgtaagagaa
     2941 aatttagaca attatcgctt taatgatgcg gctaatactc tatataaatt cttttgggat
     3001 gatttttgcg attggggtat agagcttagc aaagccgaaa aatcaagcgt taaagaactt
     3061 ggtagtattt tcaaagaagc tttaaaactt ttaaatcctt tcatgccttt tatcagcgag
     3121 tatttatacc acaaactaag cgatacagaa cttaaaacaa gcccttctat tatgataagc
     3181 aaatatccaa aatttaaaga acaagataaa aatatagaaa aaatcttttc tttgctcata
     3241 gaaagcatag ttagtatccg ccgtgctaaa agtttaatcg atcttggaaa ttctaaaata
     3301 gaaaaagctt atatcaaatt taacgataaa aaaatcaaag atgaaatcaa agcttatatg
     3361 aattttatca taatgctcgc aaagtgcgag caaatagaat ttagtgaaga aaaattacca
     3421 aaggcaatat gtgatgttag cgagaattta gaaattttta ttacgcttga aaatgttgat
     3481 ttaagtggta ttttaacaag acttgaaaat caaaaaaata agcttgaaaa agaaagtttc
     3541 aagcttaact ccatgctttc aaatgaaaaa ttcatcgcta acgcacctaa agaggtggtg
     3601 gagcaaaata aagaagctct agaaaattta aaaattcaac ttgaaaaaat atcagttgaa
     3661 cttcaaaatc taagaggtta aaaatttgat aaaaataaaa aatttaaaaa aatattatgg
     3721 caaggaactc gtgataaacg atgtttcttt ggagattaaa aagggtgaaa tttacgccat
     3781 agtaggtcat agtggagctg gaaaatccac tcttttaaga tgtattaatg gacttgagaa
     3841 ttatcaagaa ggaagtttaa aagtctttga tcaagaaatt aaagatttaa gtcaaaaaaa
     3901 atcaaaagag ttaagaatgc ttagaaaaga tatagggatg atttttcaaa attttgccct
     3961 aatggagcgc aaaaatgtat ttgaaaatgt tgctatgcct ttaagaacac actatactca
     4021 gtgtaaattt catgccaagc tttttaataa agaatacatg agcgaaaaag aaattgccca
     4081 aaaagtcaat tccttacttg aaatcgtagg gcttgatcat aaaaacaaat cctacccaag
     4141 agaactgagc ggagggcaaa aacaacgtgt tgctattgct agagccttag ctttaaaccc
     4201 aaaaatttta cttagtgacg aagctacttc ggctcttgat ccaaacacta caaaaaatat
     4261 tttagagctt atatctaaaa tcaatgctga atttgggatt actgttgttt tagtaactca
     4321 cgaaatggat gtggtaaaag acatagctca aaaagcttta ttacttgaac atggacaaat
     4381 cataggaagt ggagcaattg atgagctttt tttaaggcct aatgccaaaa tgaaagaatt
     4441 tttaggagaa agcgacttct tgcctgagca cggacttaat atcaaacttt actttccaaa
     4501 agaagttgcc caaaatagcg tcatcactca tatggcaaga actctaaata tagactttaa
     4561 catagtttgg ggtaaaatag aaaaactgaa tggaaaagcc ttgggaaatt tagttataaa
     4621 tataaatgaa aaggataaag acaaggttct tgattacata gaaaaaagtg gagtattatg
     4681 ggaggtggca tcatgaatga agaaaacatc tctattgtca gtgctttttt tagtagaatt
     4741 tctcaatttt ttaatgaatt ttcttggcag gatattaaag aagtgagttt aagttctatc
     4801 acgagtttca atgaaaatta tgaaaacatt ttaaaacctg cacttaatga aacaatttat
     4861 atgagtttaa tggctgtact atttggattt ttattggcta tcattcctgg aattttactt
     4921 gctatttggg ataaaaatgg aattaaagaa aataaaatcg cttatagtat tttagatttt
     4981 attaccaata tattacgcgc ctttccattt ttaattctta tagttgttct tttaccactt
     5041 tctaaaatca tagtaggcac aagcataggt acaaatgctg ccatagttcc tttagctatc
     5101 ggaatagctc cttatttggc aaagatgctt gaaagcgctt ttaaagaaat agacaaagga
     5161 attatagaag cagcaaaaag ttatggtgct agcaatattc aaattatctt caaggttatc
     5221 tttagtgaag cccttcctgc tataattagc ggaattaccc taactttgat ctttaccatt
     5281 ggtttttctg ctcttgctgg aactgtcggt ggtggaggat taggagatgt agctattcgc
     5341 tatggttatg aaagatttaa caaagaagtt atgattcaaa ctgtagttat tttacttata
     5401 ttagttcaat tagttcaaat tctaggtaat ttattttata cttgggctaa aaatagtaaa
     5461 actacatata tcattgccac tctattgatt ttacttggag ttagtatagt tatcaatata
     5521 aacaatgatg aaaatttctt ttggcaagta attgttttta tcttattttt aggaagtttg
     5581 ctttataaag gtttcaaaaa ataaggagat tatatctcct tttaagataa atataagttt
     5641 ttttaagtaa aatttaaaaa aaattaaagg aattaaaatg atgtatcaga tgcgttaatc
     5701 tgactatcaa caagttttta tatgcttctt cctgatagtc agagtgaatt tattaagatt
     5761 aaagcaagca caaaatgact aaaaaggaaa aaaatgaaaa tcaaatcttt atttatagca
     5821 agtattttaa cattaagtct taatgcaaat gcattagaaa ccatcacagt tgcagcaact
     5881 cccgtccctc atgctgaaat cctagaacaa gtaaaacctg atttagaaaa acaaggctat
     5941 aaacttgaaa tcaaagaatt tacggattat gttttgccta atctagctgt tgataacgga
     6001 gaagccgatg caaatttttt ccaacatact ccttatttgg aagaatttaa taaaaacaaa
     6061 ggcaccaaac ttatcaaagt agctgccata cacatagaac ctatggctgt ttactccaaa
     6121 aaatacaaaa gtctagatga tattaaagaa ggggttaaaa tcgccattcc aaatgatcca
     6181 accaatgaaa gtagagcttt agatattatt gcaaaaaaag gtttggtaaa atttaaagat
     6241 aaggctttaa aaacacctct tgatattata gacaatccta aaaaaattaa atttgtagaa
     6301 ttaaagcccg cacaacttcc aagagctttg aatgatgttg attttgctgt aattaattcc
     6361 aactacgctc tctctgcaaa tctaaatcct gcaaaagata gcgtatttat cgaagataaa
     6421 gaaagcccgt atgcaaacat tcttgttgta agagtgggac atgaaaacga tccaaaaatc
     6481 aaagccttaa tccaagctct acaaagtgat aaaatcaaac aatttatcat agaaaaatac
     6541 aacggatctg ttttacctgc tttttaattt tgtcccttac ctagggactt ttttcttaag
     6601 tacaaaggag tttttatgaa tttatttaaa attattatac tcgcttgcat tctaaattta
     6661 tctagcctat ttgcacaaaa cattactata ggagccactc caaatccttt tggtagctta
     6721 ctagaactaa tgaaagatga ttttaaaaac aaagggtatg agcttaaaat agtagaattt
     6781 tcagactata ttttgcccaa tcgtgcatta gaggaaaaag aacttgatgc aaatttatat
     6841 caacacaaac cttttttaga agaatacaac ctaaaaaaag gttcaaattt aattgcaaca
     6901 acgcctgtac ttatagctcc agtaggagtt tatagtaaaa aaatcaaaaa tttagaaaat
     6961 cttaaagaag gtgctagagt tgctatacct aatgatgcga ccaatgaaag cagagcttta
     7021 gagcttttag agaaagcaaa attaatagag cttaacaaaa atactctaaa aaccccattg
     7081 gacataaaca aaaatccaaa aaaacttaaa tttatagaac ttaaagccgc acaacttcca
     7141 agagctttag atgatgttga tattgctata attaattcta atttcgcact tggagccggt
     7201 ctgaatccaa gtaaagatac tatttttagg gaagataaaa atagccctta tgtaaattat
     7261 gttgtggtac gctcagaagg taaaaatagc gaaaaaacca aagtaattga tgaaatttta
     7321 agaagcgata aatttaaagc catcattaat gaacattata aagatatatt aatcccagct
     7381 ttttaggagt ataatatgaa tattaaaaaa atatttttaa gtgttttatt tacaattagc
     7441 cttagttttg gggcagataa aaccataatc ataggtgcaa caccaacgcc ttatgctgaa
     7501 attttaaatt tctctaaacc cttatttcaa gaaaaaggtt ggaagttaat agttaaggaa
     7561 tttaatgact ataatatacc taacatcgct ttaaatgaaa aagatttaga tgcaaattta
     7621 tatcagcata aacctttttt agatgatttt aatacccaca aaggaacaaa attaagttct
     7681 ttaggtgcta ttgttttagt tcctatggct atatattcta actccataaa agatataaaa
     7741 gacattccta atggtgctaa aatcgctata cctaatgatg ctaccaatga aagcagagct
     7801 cttgatttac tagctaaagc aaatttaata gagtttaaaa gtcaaagcac ccttaaaacc
     7861 cctattgaca taagtaaaaa tccaaaaaaa cttaaattta tagagcttaa agccgcacaa
     7921 cttccaagag ccctaaatga tactgatttg gctattatta ccacaaacta tgctcttgga
     7981 gcaggcttaa accctttaaa agatggtatt tttatggaag ataaagatag tttatatgct
     8041 attgttttag ctacaagaaa aggtgaagaa acaagtcaaa aaagtcttgt tattaaagaa
     8101 attttaacaa gcgataaaat taaaaatttt atcatagaaa aatacaaagg ctctgttatc
     8161 cctacttttt aactctatac aaagccttct aaaggctttg ttaaacttat aaaagctaaa
     8221 atactattta ttgcattata attcttagga taaaaatgaa aattattttt ttaacttttt
     8281 ttattgtgat aaattatatc caagcagcta gtttagaaga aatcaaaaca gcactagcta
     8341 aagaatttag aaataatttt cctaaaatta taatttctca aattgattta aaaataacat
     8401 cattgcctaa agattttgat caatatgaat ttctaagaat cgctaatggg cgttttaatc
     8461 aagcacaagg ctttttaagg gctgaattta aaactccgca aaatatacaa aaaaatgtat
     8521 tttttagata tttcattcaa gcaaatttag aagttttaaa aagcgaacgc gctataaaaa
     8581 gaggagataa acttggagct tttgactata aaagcgtatt gattgatttt gataaagttc
     8641 ctttaaatgc cttaacctta gatgatgtag ataatcttgt agctaaaagc aatattaaca
     8701 aaaacgccat tttaagagca aatatgttta aaaccacagc tttaatacgc cgaaatgatc
     8761 ctataatcgg ggttttaagc gaagcaaatg ttgatgtttt aatcgaactt gtggctttgc
     8821 aaagtgcaaa tatgggcgaa aggattcgtg caaaaaacaa agaaggtaaa gttatgcaag
     8881 gtatcgtagt gggtaaaaat aggatgatta tacaatgaaa gttttattgg gaatttctgg
     8941 ttcaagcagt gtcaatttag gcttaaaatt attaaaaaat ttagaaaatc aatgcgaact
     9001 ttattgtatt ttaacccaag gtgcaaaact taacttcaaa actgaaaatc aagcaaattt
     9061 agaagaaatt tgtcaagaaa attttaaata cactcatttt ttagatgata aaaatttaag
     9121 tctaagtgta gcaagtggat cttttggaat agaaaaaacc atcattgctc cttgttcaat
     9181 ttcaagttta gcaaaaattc acgctggttt tgcagacact cttttaatgc gtgctgcagc
     9241 agtagcccta aaagaaagaa aaaaactcat cttaggggta cgtgaaatgc ctttttctac
     9301 tttaaattta gaacatatgt taaaacttag ccaaatggga gttatcatcg cccctcctat
     9361 tatcgcaagc tattctaaag caaacaatct agagcaaatg gaaaatttta tcgcaggtaa
     9421 atggttagat cttttagaaa taaaacacaa tttatatgaa aaatggcaaa atttttagtt
     9481 taaatttgtt atatttttaa aaaaaattgg agcaaaaatg acttgtttat atcctgggac
     9541 ttttgatcct attaccaacg ggcatttaga tgttataaaa cgggctttaa aaatttttga
     9601 tgaagtcatc gttgccatag caaaaagtga acataaaaaa ccttgctatg atttagaaaa
     9661 acgcaaagaa ctagccctgc tcgcaacaca aaatttaaaa aatgttaaaa tcattgcttt
     9721 tgataattta cttgtagatt tagccaaaga attaaaagtt aatactataa tccgtggact
     9781 tagagcagtg agtgattttg aatacgaatt gcaaattggc tatgcaaatc acgcactttg
     9841 ggaagatatg gaaaccattt atcttatgcc aagtctaaaa catgctttta tttcaagttc
     9901 tattgtgcgt tctatagtag cacatggggg tgatgtaagt tctcttgttc caaaagaaat
     9961 tctacctttt ttaaaggatc aatcttgtat gtagtttttg aaggtattga ctgcgtagga
    10021 aaaagtacgc aaatttcact tttaaaagaa atttataaag acgccatttt cacactcgaa
    10081 cctggcggaa cagaacttgg aaaacattta agagaaattt tacttaataa aactcatcct
    10141 attaacaaaa gagctgaact cttgcttttt ttagctgatc gtgctcaaca ttttgaagaa
    10201 atcttaaaaa ccaatcaaaa caaactcatt attagcgata gaagttttat ttcaggcatg
    10261 gcttatgcca aagattttga aaacgatttg ctttttgctt taaatagttt tgctttagaa
    10321 aatttttttc cacaaaaaat tatcttttta aaaggagatg caaaccttat ccaagaacgc
    10381 ctcagtcaaa aagaactaga tagtatagaa aaacgtggca ttgagtattt tttaagcgtg
    10441 caagataaac tcgaaaaagt gcttcatttt ttaaaagaaa aaatttctgt agaaatttta
    10501 acacttgacg caaaagaaag taaagaaaaa ttacaccaac aaataaagga atttttacaa
    10561 tgattaacgc tttaaaagga atgaaagatt tattagataa agatgcatat tattatgaaa
    10621 aagtgattaa aatctgcgaa gaagtagcta aaaactatgg ctttactttt atcaatacac
    10681 cgcatttaga actttgcacc ctttttaaaa gaagcgtagg agaaagttct gatatagtag
    10741 gtaaagaaat gtatgaattt atcgataaag gcgaaaatca tgtttgcatg cgtcctgaag
    10801 gaactgctgg ggtggtgcgt gcctatatag aaaaaaaact cgataaaaac actagtgtga
    10861 aaagatggtt ttattatggt tctatgtttc gttatgaaag acctcaaaag ggtcgcttaa
    10921 gagaatttca tcaatttgga gttgaaagcc ttggcatacc taatgtttat gaagatgcaa
    10981 gcattatttt aatgctagta gaaattttct cacgccttgg tattgatttt aaacttcaac
    11041 ttaattcttt aggctgctca caatgcttgc caaaataccg cgataggctc gttgaattct
    11101 tagattccaa agaaggtttt tgtgaagatt gtttgcgtag aaaaaattta aatcctattc
    11161 gtgtcttaga ttgtaaaaat gagcattgtc aaaatttgct tgaaaatgct ccgcttttga
    11221 tcaataattt atgcacctct tgccaaaaag actttgaaac actgcaacaa attttaaagg
    11281 ataatggagt taaatttgag ttagattcaa aacttgtgag gggtttggat tattattcta
    11341 aaacggcttt tgaatttata agcgatgaaa taggagcaaa ggctgctatc gcaggtggag
    11401 gacgctacga tagacttata gagtatttag gtggaaaaag tggctatggt ataggttttg
    11461 ccatgggtat agaaagaatt ataactattt tagaacaaaa agaagaaaag attcaaagag
    11521 aaggaattta tctttgtgct atggatgaaa tttatatcca aaaacttttg catatcgcta
    11581 caaatttaag aaaagaatat aaagtacttt taagctatga agcaagaaaa ctagccaaac
    11641 atcttgaaaa cgcggataaa aataatactg aaatttttct ttgcatggga gaaaatgaag
    11701 cacaaaatga aagtttgttt tataaaaatt tagcaaaaaa agaagaaaaa atgattaaaa
    11761 tttcagactt aaagaaggtt ttatgatgga ttatggtatt gatatttggg gaaatgaaaa
    11821 tttcattatc aaaaatggta aagtttgtat caattacgag aaaaaacctg ctattattga
    11881 tatagttaaa gaattaagag atgatggata caaggggcct ttacttttaa gatttcctca
    11941 tcttatccaa aaacaaattg aaaatattta cggaaatttc aataaagcaa gaaaggaatt
    12001 tggctataaa ggaggattta acgctgttta tcctttaaag gtcaatcaat accctggttt
    12061 tgtaaaaaat cttgtaaaac ttggaaaaga ctataactat ggacttgaag caggttctaa
    12121 ggcagagctt ttactcgcta tggcttataa taacgaaggc gcacctatta ccgtaaatgg
    12181 ctttaaagat agagaactta tcaacatagg ctttattgca gctgaaatgg gacataatat
    12241 cactttaacc atagaaggac ttaatgaact tgaagctatc atagacatag ctaaagaacg
    12301 ctttaaacct aaaccaaata taggcttacg tgtacgtttg cattctgctg gagttggaat
    12361 ttgggcaaaa agcggtggga ttaattctaa atttggactt acatccactg aactcataga
    12421 agcggtaaat ttactcaaag aaaacaaact tttagaacaa tttaccatga ttcactttca
    12481 tctaggctca caaattaccg aaattcaccc cttgaaaaaa gccttaaatg aagcaggaaa
    12541 tatctataca gaacttagaa aaatgggagc taaaaatcta aaagctatta atcttggtgg
    12601 cggtttagct gtggaatact cacaatttaa aaatgaaaaa agtagaaatt acaccctaag
    12661 agaatacgct aacgatgtag tttttatcct aaaaaacata gccgaacaaa aaaaagattt
    12721 agagcctgat attttcatag aaagtggacg ttttgtagca gctaatcacg ctgttttaat
    12781 cgctcctgta ttagaacttt tttctcaaga atacgcagaa aacaaactca tacttaaaaa
    12841 acaaaatcca aaacttatcg atgagcttta tgatctttat aaaagtataa aaccttccaa
    12901 tgctttagaa tacttgcacg atagcataga tcatttagag agtattttaa ctctttttga
    12961 tttgggctat gtggatttac aagatcgttc caatgctgaa attttaactc atttgattac
    13021 aaaaaaagcc atcttgcttt taggcgataa gcaaaatcct gcggatttac ttgccataca
    13081 agatgaagtg caagaaaggt atttggtaaa tttttcgctc tttcaaagca tgcctgattt
    13141 ttggggttta gaacagaatt tccccatcat gccacttgat cgcttagatg aagaaccgac
    13201 acgaagtgca agtatttggg atataacctg cgatagcgat ggagaaattt catactctaa
    13261 agataaacct ttatttttgc acgatgtaga tgtagaaaaa gaaaattatt ttctagggtt
    13321 ttttcttgta ggtgcctatc aagaagtact tggaatgaaa cacaatcttt ttactcatcc
    13381 tactgaagct attataagca tcaatgaaaa aggctatgaa gtcgagggga ttatagaagc
    13441 gcaatccata cttgatacct tagaagattt agactatgat atacacgcta tcatggatat
    13501 acttaatgaa cgcataagta attctaagct tgtaaatgat aagcaaaaaa agcatatttt
    13561 aggcgaactt tatcttttct taaatgataa tggttattta aaaagcatag gagtttagat
    13621 gaatttttgg ggtattataa aagaagattt ttctcagcca aaggcacaag atccagcttt
    13681 taattcttgt atagaacttt tttttaatta ccctggagta tgggctgtag taaattaccg
    13741 ctttgcacat tttttttaca taagaaattt taaacgcatt gctagaatga ttagcggaat
    13801 ttcacaattc ttaactgggg tagatttgca ccctggagca gaacttggaa ggcgtatttt
    13861 tatagatcat gccaatggag tggttatagg tcaaacagca attatagaag atgatgtttt
    13921 aatttatcaa ggcgttactt taggtggaac aagccttgaa aaaggtacta aacgccatcc
    13981 aaccataaaa aaaggagtga tcataggctc aggcgcaaaa gtgcttggca atatcaccat
    14041 aggagaaaat gccaaaatag gctcaaatgc tgtagtggtt aaagatatag gtgcaaattt
    14101 aactgccgtt ggaattcctg cttatattat cgaagagcgt aaaaataaaa acattagagc
    14161 catagatgca aattgcgatg acaaactaga aaagttagaa aagaaaattt tagaacttga
    14221 aaatcttata ttaaaacaac ctgaatcaca aaaataataa ttttttataa tacataaaat
    14281 tatatgtatt attatgcgta ttaatttttc ctaaaaatta atacaaattt tcacatttat
    14341 tgaaatttac aactcatttt taaattaaat ttattgtaaa aatgcaattt tctgctaaaa
    14401 ttaaacaaaa attatcaagg attgaaaaat gcttacaaaa agatctcaag ttttagaaga
    14461 atctatcact ttagctatca ctgcacttgc caatgaactt aaagccaaag gcgaggatat
    14521 cattagtttt tcagcgggtg aacctgattt tgacacacca caaaccatca aaaatgccgc
    14581 tataagtgct attgaaaaag gatgtggaaa atacactgct gttgcaggaa ttcctgaagt
    14641 attaaaagct attcaaacca aatttaaaaa agataataat cttgattatg aaacaaatga
    14701 aatcatcacc aatgtaggcg caaaacactc tctttttgaa tgtatagaat gcttagtaga
    14761 aaaagatgat gaagtgatta tccctagtcc ttactgggta agctatcctg aaatggtaaa
    14821 atttgcaggt ggaaaacctg tatttataga aggcttagaa gaaaatggct ttaaaattac
    14881 cgctgaacaa ttaaaaaaag ctatcacagc taaaaccaaa gttttgatgc taaattctcc
    14941 ttcaaatcct gtgggatcga tttattctaa agaagaatta actcaaattg ctaaagtttt
    15001 agaaggaacg caaattactg ttttaagtga tgaaatgtat gaaaaacttc gctatgatgg
    15061 ttttgatttt gtagcttttg caagtgtaag caaagatgct ttaaaacgca ctgtgaccat
    15121 taacggactt agcaaatgtg gagctatgcc aggatggcgt tttggctata tggcaagcaa
    15181 aaataaagcc ctaatttcag ccgttaaaag acttcaagga caaagcactt caaatatttg
    15241 ctctatcact caacatgcag ccattcctgc tttaaatgga gaatgtgata aagatataga
    15301 aaaaatgcgt caagcctttg aaaaacgccg taacttagcc ttagacatac ttaaacaaat
    15361 cccaaatatc agtgtttata aaccagaagg tgctttttat ctttttgtaa atatacaaaa
    15421 aatagaaaaa gattctatga aattttgtca aaagttactt gaacaagaaa aagttgccgt
    15481 tgttccaggt gtaggttttg gaatggatgg atacttcaga ctttcttatg ctacaagcga
    15541 tgagcttatc aaaaaaggtt tagaaagaat agcaaatttc attaaaaact ataaataatt
    15601 ctaggttaaa gcctagaatt atttaggcaa attaaaacct tataaaatca aggcttttta
    15661 agcacagcat ttaccctttg aacactatct gatttattta aactcaatct tattatagaa
    15721 ttttctaatc cacctaaaga atgtgctaca tttgcctcta ggcttatcat atctaaagca
    15781 tttaattcaa atttttcctt ttccacttca aaccaaattt taccgcttaa aacttgaaca
    15841 tgtatagcaa aaggagcttt atgctctttc atcacactgt ctttagctaa taaaatttga
    15901 atttctttac ctttttcatt gtcaattaaa acattgattt tcacttcttt tgggctaaat
    15961 tccgctccat tccattgaat gattttcaca aaatctcctt ttttagtttt acaaaactat
    16021 agcaaaagcc aaaatataaa ttataaactt gtgttaattt attcttcttt ccaccaaaaa
    16081 tcctgtttaa atttagctcc tacttcataa gcctcgccca tttttggtgt gataaggggt
    16141 aaatctaaat tttcataaag aaattttacc acctcattcc atgcatgagt tcctgctaaa
    16201 aatctccccc aatgtatagg catgacagcc tttgcattaa gatcttttgc ctcttttaaa
    16261 atttgctcag gaaaagagtg tgaatatggc caagcgatat taaattgtcc gctttcaaga
    16321 caagctaggt caaaacttcc aaaatactca cctatttttt taaaatgtgt aaaataccct
    16381 ccatctgcgc taaaaaacac tctcttatct acacttaaaa attccatcac aaaagaagcc
    16441 caaagggttt tgtttttacc atctccccta cttgaactgt gctgtgcagg tgttgccatg
    16501 atttttaaat caccaaattc tattccactc caccaatcaa gctctatgat ttttttctcg
    16561 ctcaccccat agctttttag ataatttccc acttttaaag gagtgataaa aaatttagcc
    16621 ttatctttta aagcttttac actcttagca tctaaatgat caaaatgcga atgcgtgata
    16681 atcacagcaa aaatttcatt aaaatcattt atattataaa caggagcatt tttaaaagcc
    16741 ttgttgataa aagaaatggg cgaagcatga gtgttaaaaa taggatcaat caaaatttta
    16801 tactctttaa aacttataaa aagcgaagaa tggccaagcc aagtaatatg tggggtgcta
    16861 aaaccactca aatcaggctt gaaaaaaggt aacttaaaag aagggatggc attttttgga
    16921 taaagataat aatacctcaa aatttcttta aaagacactt taggagttat aagactgtgc
    16981 tcattttcat taagaaaaat ttcatatttt ttaccctgca cttttttagc ttttgatcgt
    17041 tgtgtattgg aaatatcaaa gattttaaat gataaattca aatttttcct tttatgttta
    17101 ttaagattat atctaaaaag tttttagatt aattttattt tattgttaat tttttagttt
    17161 gcttacacta aaatgaattg tctgatttga attagaactt caaaaagaat tggttaaaaa
    17221 atcaatgaaa aattaggtag caagctaata aaagaattat gttttacaga ttttgtcatt
    17281 tctttaaaat tttaaaaaat tttcaagcct tttaaaaagg cttgaataga gattttaaga
    17341 ttactcaact tcagcgtcga ttacatcgtc atcttttttc tttttatcat ttgctgtgtt
    17401 tggctcatct tttttataca tattttcggc taacttatga gaaacttcgc ttaaagcttt
    17461 cattttgctt tcaatctctt ctttgcttgc attttgattt ttcaaagtct cacgcaaatc
    17521 atcaagagct ttttgaatat tttctttatc agcagcggca actttttcac ccaactcact
    17581 taaagatttt tctacttgat gcgccaagct atcagctgca tttctagcat ctacagcttc
    17641 tttgcgtttt ttgtcttctt ctttgtgaag ttcagcatct tttaccatgt tattaatctc
    17701 ttcctcgcta agtccgcttg aacctgtgat tttgatctct tgagccttac ctgttgcttt
    17761 atcttttgca ctaacagtta aaataccatt tgcatcgata tcaaaagtaa cttcgatttg
    17821 tggcataccg cgtggtgctg gtggaattcc ttcaagatta aaatttccta aagatttatt
    17881 atcacgacta aattctcttt ccccttgtaa aacattgata gttacagcgc tttgattatc
    17941 ttcagcggtt gagaaaactt gctctttttt agttggaata gttgtacctt tttcgataat
    18001 cttagtcatt accccgccta gagtttctat acccaaagag agcggagtaa catcaagtaa
    18061 aagcacatct tttacatcac cttttataac cgcaccttga atcgccgcac cgatagccac
    18121 aacttcatca ggatttacag acttattaag atctttatta aaggcttttt tcacttcttc
    18181 ttgcactaaa ggaacacgag tagagccccc taccataacg atttctttga tctcatcttt
    18241 tttaagccct gcatcgctta ctacttcatt gattttagtg atggtttcag ctactaaaga
    18301 atcaatcata ccttcaaatt tagctctagt aagtttttta accaaatgtt ttggcccact
    18361 tgcatctgct gtgataaatg gtaaattaat ttcagtttca ttagctgaac ttaattcttt
    18421 tttagcattt tctgctgctt ctttcaagcg ttgcaaagcc ataacatcat ttttaagatc
    18481 tatgcctgtt tcatctttaa attcattagc tagaaaatct ataagtttat tatcaaaatc
    18541 atcaccacct aagaaagcgt taccacctgt tgctaaaact tctactacat tatcgcccgt
    18601 ttcaagcaca gtaacgtcaa aagttccccc acctagatca taaaccacaa ttttttcact
    18661 atctttttta tcaagtccgt aagctagagc tgctgaagta ggctcattga taattcttaa
    18721 tacattaagt cctgctatcg ttcccgcttc ttttgtcgct tttctttgtg catcgttaaa
    18781 ataagcaggc acagtaatca ccgcatcagt aacactttca cccaaaaaag cttctgcatc
    18841 ttcttttaat ttcatcaaaa cttttgctga aatttcttgt ggggtgtaaa ttttacctgc
    18901 gatttctatt gcgcacgcac catttctttc ggtgatgtgg taaggaagtc tatttttagc
    18961 ttctttagcc gcatcttcat tgatcattaa acccataatt cttttgatag aataaatggt
    19021 tttttcaggg ttagttaccg cttggcgttt tgcactatcg cctactaaaa cctcgccttt
    19081 atctgtaaaa gctaccactg aaggagttgt gttttttcct tctttgtttg ggattacttt
    19141 gctctcgccg cgttcataca cagcaacaca agaattggtt gttcctaaat ctatacctat
    19201 aactttactc attttttatc cttttattaa aatttatttt gctacactaa ctttggttgg
    19261 gcggatcacg cgatcggcta ttttataacc tttttgaagc acttgaacca cttcaccact
    19321 ttgatggttt tcactatcta catgaaacat tgcttcgtgt aaattaggat caaactcttt
    19381 ttcatctttg ataagagcca ctccatgttt ttcaagtttc ttaagaaata aatctaaagt
    19441 attttgcact ccttctttga tttttaagct aatttcatct tggcattcaa cattaacagc
    19501 tgcttctaaa gcatctaaaa catcaagcaa atcctttgca aagctttcat ttgcataagc
    19561 catagcactt agcttttctt tttccattct ttttttaata ttttcaaatt cagcgtttgc
    19621 acgcatatat ttgtctttta attcatcata gtctttttgc aatttgtttt gctcaacatc
    19681 ttcgatattt tgcaaattct catcttgcaa atgttcagaa ttttctgcgt tttcgttttc
    19741 aaattcttgc ttttgctcgc tcacgccgcc tcctttatat attgtaatat ttttttataa
    19801 tccgtataaa cactacctgc taagataata tttacatctt cgcccaaaaa ctgcgcatcc
    19861 accttaagcc ccataaaacc ttctttaaat aaaggttcaa attcaagact ttctttaaaa
    19921 tgacggtgaa tttgacaatc taagagctta acaaattcat cattttgata aatttgataa
    19981 gctctttctt cattgcttct atagcaaatc aaattttgtc ttaagctagc tattttttct
    20041 acaagatcta taaaatgaac tctcaaagct attttttcta tactagaaag atcaagccct
    20101 ataagacttt gtaaaaaatt ccacgcttct ttttcgtatt ttaaaaccag ctcttcatct
    20161 tcaaaatcaa gcactataaa tttagtatta agatctagta cttctttaag tactaaactt
    20221 ctacctccat aaacaagaca ataaatttca aattctttac ttaactcttt caaaaagctt
    20281 tcgtttttga tatggatatt tttatcttgt tctttttccc aaaaactttg ccaataattt
    20341 tgcatcgtta aaatagtagg aattctacca ctacttatat gaagctgagt gatcaaaccc
    20401 tcatcgctaa gtcttttaag ataaacgcgt atagtcgaag caggtatgca aaggtttgaa
    20461 tttaactcat tagaaccaat aggcgcatta tccaaaagat aagtttggat aatagactct
    20521 aaaatcaaat cctttttatc tcggcttttc atagctcttt ccttaaattt ttagcactct
    20581 attttttgat tgctagatat attatacaac attgagtgtt attttgtcaa gtgtaaatat
    20641 aaaaaatata cttaatttta tttagtctat atgactaaag ttttattagt tactttttta
    20701 taaggataag ctatctttta agattgaaaa tgcaacgata aaaataagat gaaaatttta
    20761 aattgaattg attgtctagt tttttaaagg tatagggtat taaaataaaa aactaaagaa
    20821 gactttaaaa gccctttagt ttttctatta aagcttaaaa gctaccattg atagaaatat
    20881 acattcttct tccttcttct atacgattgt aagtattgac ccaagtagga gcaccgctat
    20941 tttgataaga ttcccaacca tctgtaaaac ttttgttaaa aagattataa atagctgcat
    21001 tgatactcca ttgcttattg atatcataac gcacacccat agaagcgaaa aagatatcct
    21061 tataatattc cctatttata ttagtatcac ccatatagcg atctatttgc cattcgcctt
    21121 ttatccaagg ggtaatttta ttatagaagc tgtattcagt ttttaacatg atattgtgtt
    21181 ttaaactatc ctgctcaggt ttacctatca cacttttatc ttgtgcttct ttaacctcac
    21241 tatcaagata agtataagca aaatttacat ttaaattatc aagagggctt atccctgctc
    21301 caagctctat acctttatat tcaaccttgc catggttgat tgccttaaaa catctatcag
    21361 catcgcaagt accaattcct ggaatcatat tgcctttatc atatctttgg gttgaaattt
    21421 tatctttaaa atttgttaaa aaacctgtcg cagaaacata aaacaaatca ttattgtaaa
    21481 tagctgctat ttcataattt aaagatgtct cttcttttaa atcaggattt ccatatatag
    21541 ggaatctacc ttgaccacta taattataag ctccatttat caaacgattt gcataaggag
    21601 tcctaaaacc cgtagataca ccgcctttta aagtaagttc atcagtagga ttataaacca
    21661 gataagctct tggcgaaata ttatttccaa aaatttcatg atgattgtat cttgctccaa
    21721 aagtcaatct taagttatct tttatgctgt actcatcctc tgcaaatatt gccaataaat
    21781 actgatcaaa attggtcgga ttagctattt tatcttgcat tttttcaagc ctatattcac
    21841 cacctgcgct taaaatatga ctttgtccca aaggaatgac agacttagta tctaagataa
    21901 tatcttctgc gactatatct ctattttgtc ctaaaaatgg ctgattagct tgtcctacaa
    21961 cttcgcgtcc attattgctt actctattat actgcaaacc agaagtgata gaaaagtttt
    22021 cataaacacc ctcatggctt aaataagtca caaatttatc aacttccata atatctgcat
    22081 aaccacccgt taagctatct ggcgcactac ctgggcttgt gatggttcct aattgaccct
    22141 gtttgttatc gtaatgattt cttgaaaaat ctatatcaaa tataaaggta ttataatcat
    22201 tagctaaata actaattctt gttcctatat taaaattatt tgcttttgtg ggactttgag
    22261 cttgatctcc ttgaactctt tgtccacttc catttgtaaa ttcaacatta gattgctgtc
    22321 tgtaaaattc tctaaatcga agtgttagac ccaatttgtc attcatcaaa ggaccactag
    22381 aataaatact cgttccataa gtattacccc aatctttatt ttcatttaaa agagcatcca
    22441 aacttacaga agtttcccat ttatcactta cttttttggt aatgatattt accaccccgc
    22501 ctaaagcttc agagccatat aaagtactca tagggccttt tataacttct atcctttcta
    22561 tactagaaat cggaggtaag aaagaatttg aaatttcatt aaaaccatta gggcccacct
    22621 ctccgccaat accctgacga cgcccatcaa tcaaaaccaa agtatatcca gtaatacccc
    22681 tcatagtgat attataagaa cctgtttttc ccttgctagc atataaatca acgcctggga
    22741 tatctgcgat agcctctgca acatctctat aaggcttact ttgtaattct tttttactga
    22801 taacattgat agtagcagga gcttctttaa tatcttgggt aaagccagaa gcactaacga
    22861 ttgagctatc tagttctaca ttttgcgata tggcatagga gcttaagaga ccaatggcgc
    22921 aaactgatag acatattttt ttcatttttc tccttttgtc aaatattgat ttagaaatca
//
LOCUS       DAPIVO010000022        22554 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.022, whole genome shotgun sequence.
ACCESSION   DAPIVO010000022 DAPIVO010000000
VERSION     DAPIVO010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22554
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.022"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..610
                     /locus_tag="RJ239_000787"
     CDS             <1..610
                     /locus_tag="RJ239_000787"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330918.1"
                     /translation="LQNLNYEQFFNNPVQFYELNLFSDSQQQINFDYLVLDNNKINSF
                     YSKNQVNFNEENSTINLNIQGESNEIDIDLKSLLGQNLNFDKTKFNITINKFLNSNFN
                     ISHFIQKNLDLKIQNLILEKNKQNISLQGNLNINNSYQAKLQVISLDEPDEIFPWTKD
                     YGGLNQYFLKENNNFFLNLSYDSLANPQLKINGSEFSNMDLN"
     gene            610..1791
                     /locus_tag="RJ239_000788"
     CDS             610..1791
                     /locus_tag="RJ239_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDV7330919.1"
                     /translation="MSLALTFRPENFDDILGQYELIEIFKKFTALQKLPHSIFFGTAG
                     SGKTTFARVVAKEFGLDFYEFDGGNFKLEELRKILDNYKNSLYKPLIFIDEIHRLSKT
                     QQEMLLIPMENYRLILIGASTENPYFVLSSGIRSRSMLFEFKSLGVKELETLLLRVQE
                     KMKFNIDKEAKNFLLKSADARAMLNLLEFVLVLDEKHISLENLKKLRNTISSEGASSK
                     DTHYILASAMIKSLRGSDVDAAIYYLARLIDAGESADFIARRLVIFSSEDVGNADPNA
                     LNLAVSTLEAVKNIGYPEARIILAQCVVYLASTIKSNASYKAINEALNYVKNNEALEI
                     PNYLNNNHQEKQNYLYPHDFGGWVEQKYLSKNLKFYHSKGLGEEAKLLDNLYKLKNHK
                     A"
     gene            1854..2582
                     /locus_tag="RJ239_000789"
     CDS             1854..2582
                     /locus_tag="RJ239_000789"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HDV7330920.1"
                     /translation="MIKIGIYGAKGRMGKQIEECLKSETQAQISILYDKGGNLEELFE
                     KSDVIIDFSSPSGTHELLNYARTMPKPLVIGTTGLDEKILHLMQSASEVMPIFYATNM
                     SLGVAVLNYLASKASQMLKNFDIEILEMHHRHKKDAPSGTAMTLAQSVAKARNLELEK
                     VRVSGRDGIIGERSKDEIAVMSLRGGDIVGRHTVGFYEDGEFLELNHTATSRATFAKG
                     AIKIAIWLSKQEAKMYSINDFLGI"
     gene            2584..3921
                     /locus_tag="RJ239_000790"
     CDS             2584..3921
                     /locus_tag="RJ239_000790"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDV7330921.1"
                     /translation="MCAVVGVINSKNASTYAYYALFAMQHRGQEASGISVSNGKNIKT
                     IKAKGEVSQIFNPDNLKTLEGEIAIGHNRYSTAGNSSLNDAQPIAATSVLGDIALAHN
                     GNLVNKEEVRSRLIQDGAIFQTNMDTENVVHLIARSKQESLKDRFIESLKECIGAYCF
                     VLASKDKLYVVRDPHGVRPLSLGRLKDGGYIVASETCAFDLIEAEFIRDVKPGEMLIF
                     TQGNDKFESIELFSQTPRICAFEYIYFARPDSIVEGKSVYEVRKKMGEALAKKFAYKA
                     DFVVPVPDSGVSAAIGFAQYLQIPLEMAIVRNHYVGRTFIEPTQELRNLKVKLKLNPM
                     RKVLEGKEIVVIDDSLVRGTTSKKIISLLRAAGASKIHLAIACPEIKFPDTYGIDTPT
                     FEELISANKNAEEVREYVEADTLSFLSIEELTQSIGDERKYSLISFDGDYFIK"
     gene            complement(3924..5309)
                     /gene="fliI"
                     /locus_tag="RJ239_000791"
     CDS             complement(3924..5309)
                     /gene="fliI"
                     /locus_tag="RJ239_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein export ATPase FliI"
                     /protein_id="HDV7330922.1"
                     /translation="MNLEKLRSKLGKENLSAIFGEITKISATSIEIRGLKTGVGDIVK
                     LVSNENENLNTLAMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGR
                     VVDPFMRPKDGKGAIEATKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQK
                     LGIFAGSGVGKSTLMGMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIV
                     ATSDDSALMRKYGAFCAMSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTT
                     KGYPPSVLSLLPQLMERTGKEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVL
                     SRELTDFGIYPPINIQNSASRVMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQ
                     KGSDKELDEAISKKEFMQKFLGQNPEESFEFNQTLELLSQIDTPNTPLPPTQNINVGS
                     ASATLPNPNLK"
     gene            complement(5309..5881)
                     /gene="folE"
                     /locus_tag="RJ239_000792"
     CDS             complement(5309..5881)
                     /gene="folE"
                     /locus_tag="RJ239_000792"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HDV7330923.1"
                     /translation="MQKKFEDCVKTMLEIIGENPNREGLIKTPNRVFKAYEFLTSGYT
                     QNVKEILNDALFESSNNEMVLVRDIEFYSLCEHHLLPFFGRAHVAYIPNKKVVGLSKI
                     PRLVEVFARRLQIQEQLTEQIAQALMENVDAKGVGVVIEARHMCVEMRGVQKANSTTT
                     TSALRGIFLKNEKTREEFFSLINSAKQVRF"
     gene            6024..7358
                     /locus_tag="RJ239_000793"
     CDS             6024..7358
                     /locus_tag="RJ239_000793"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HDV7330924.1"
                     /translation="MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGF
                     RPGKVPVSAVLKRYERELTQDAEQNLFKSAVNSALQELKKENKELVGEPYFEKFDRKD
                     GEIIAELILSFKPEIKLEGYEKLIPEYQTPKVSKKEIDEKKDELLKRFATPEAIKTKR
                     ALKEGDFAKFDFEGFVDDKAFEGGKAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIK
                     VTFPKEYGAAHLAGKDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKL
                     KEQIKNEKLFKLVNDELKGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEI
                     EELKASKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRY
                     GMNPKEHLENYKKQGALPAVKMALIEEKLFNDIFIPKTEKSEKVSKKEKEDK"
     gene            7358..7942
                     /gene="clpP"
                     /locus_tag="RJ239_000794"
     CDS             7358..7942
                     /gene="clpP"
                     /locus_tag="RJ239_000794"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HDV7330925.1"
                     /translation="MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIV
                     AQLLFLEAEDPTKDIYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFL
                     LSCGAEGKRFALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQK
                     VAKIAKDTERDFFMSAQEAKEYGLIDKVLEKSFK"
     gene            7978..8505
                     /locus_tag="RJ239_000795"
     CDS             7978..8505
                     /locus_tag="RJ239_000795"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HDV7330926.1"
                     /translation="MVRKIITYPNPRLFLNSEIVNKFDTELHTLLDDMYETMIASNGV
                     GLAAIQVDIPLRVLLVNIFDENDEQKKEDLLEIINPEIIPLDEEMITCTEGCLSVPDF
                     FEEVKRYNHILLKYQDRFGEFKELEAKGFLAVAIQHENDHLNGHLFIEKISFAKRQKF
                     DKEFKKKKKNHKKEK"
     gene            8502..10007
                     /locus_tag="RJ239_000796"
     CDS             8502..10007
                     /locus_tag="RJ239_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HDV7330927.1"
                     /translation="MKKLKCISFHEGLDIIEVESTFTRGLPNLSIVGLASTAIKESVE
                     RIKATLLSCDFAFPAKKITINLSPSGIPKKGSHFDLAIALLILLQNEELDDFFVVGEL
                     GLDGSIKSTNELFSLLLFLSAKIKKAKIVVPKSIAQKASMIPNLEVYGLENLNEAIEF
                     FKEKNYENFRFSHNHPLFANPLQIENEIFLQNMDFKLDFKDIKGQEKAKRACMIAALG
                     MHNILFEGSPGSGKSMCAKRLVYIMPPQSLSEILMQNAYMSLDSKDCEFTKIRAFRHP
                     HHTSTRASIFGGGTKNARIGEVALANGGVLFFDEFPHFNKQIIESLREPLEDHKIHIS
                     RVNSKITYETKFSFIAAQNPCPCGNLFSKNLSCVCSENEIKKYKNHISAPIMDRIDLY
                     VAMDEISKDDKTSISSKEMSEKILQAFIFSKKRGQKEFNGKLKDEDLSRFCVLEKDAK
                     DTLDLAISRYNLSLRSLNKILKVSRSIADLEQSLNISKTHILEALSFRARN"
     gene            10009..10707
                     /locus_tag="RJ239_000797"
     CDS             10009..10707
                     /locus_tag="RJ239_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HDV7330928.1"
                     /translation="MENKSIAIFIDAENIPAKYAKSIFDIASDYGEVIIKRIYGDWTQ
                     KNIQGWREQIAEYSLIAMQQFNFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSDSD
                     YTSLIQKLRENKKQVIGMGLEKSIKSYVNAFSEFFYLDKDESKKEDILSKDYLRALIN
                     ITEQLIDEKGRAEYAQIRTNMNRKYSDFHPQNYGFKNFRALIQKFLPKMKKFEEEREK
                     NIYFLVKKDYESYY"
     gene            10691..12061
                     /locus_tag="RJ239_000798"
     CDS             10691..12061
                     /locus_tag="RJ239_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ADP-dependent NAD(P)H-hydrate
                     dehydratase/NAD(P)H-hydrate epimerase"
                     /protein_id="HDV7330929.1"
                     /translation="MKAIIDNIKILEQNAINKGLDELILMENAGLNLAKLIKKEAKKI
                     RIQRKIRKVKILFLLGGGNNASDGLVALRNLKHAKAYKIGFKENTLFKKQEQILQNYA
                     FKFCKKEPNFKKFHIIIDCILGTGSNRCLDEKTSLIIQKVNQSKALKIACDIPTNLGF
                     YPCFKADITFCMGALKEILLEDFAKEFVGRIKIANLGIRSKKFYPNSQAFLLEKKDLK
                     TIDRKINANKGNFGHIYIVANASAGTLAGLGALNFGAGLVSLVAQKSFSPLLMLKEKI
                     ENNASAIALGMGLENLDFLKDEILQNTPLILDANCFLSEALLWYLNRKDVVITPHPKE
                     FIKLYKMCFDENLDIETLQKNRFFYARKFSQNYDCVLVLKGANPIIVQKEKLFVVNLG
                     NQALAKGGSGDVLSGMIAAHLGFGFSALEAAKNATLAHGLVAKKYKFNKNSFDALKLI
                     KGLKCL"
     gene            12052..12618
                     /gene="purN"
                     /locus_tag="RJ239_000799"
     CDS             12052..12618
                     /gene="purN"
                     /locus_tag="RJ239_000799"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HDV7330930.1"
                     /translation="MLVKLAVLFSGNGSNLENILEKLHKKTIGENTYEVVLCICNKKD
                     AFGVQRAKKFGLDTVIVDHKAYNTREEFDTILVQKIKESGANLTVLAGFMRILSPVFT
                     KNIKAINLHPSLLPLFKGAHAIKESYESDMKVAGVSVHWVSEELDGGMIIAQKAFEKR
                     NLSFEEFEEKIHSLEHEILPLSVIEIFS"
     gene            12690..13409
                     /locus_tag="RJ239_000800"
     CDS             12690..13409
                     /locus_tag="RJ239_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HDV7330931.1"
                     /translation="MFEWIFSIDAWITLATLSALEIVLGIDNIIFLAILVSKLPPEHR
                     DKGRILGLAFAMITRILLLLSLFWVMKLVTPLFSVLGNEISGRDLVLLLGGLFLIVKS
                     IKEIKEQISHQEESQSHFKASNKLWIVVAEIAVIDIVFSLDSVITAVGIAQDVTIMII
                     AVIIAVAVMLFASKPIADFVEKYPSIKILALAFLVLIGVVLVAESFDIHIDKAYIYTA
                     MAFALVVQILNILDQRKEKNG"
     gene            13402..13611
                     /locus_tag="RJ239_000801"
     CDS             13402..13611
                     /locus_tag="RJ239_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HDV7330932.1"
                     /translation="MAKDANGIELNTGDSVSVIKDLKVKGASTTLKRGTTIKNIKLTS
                     KEGEIEARVDKFGVIVLKTEFLKKI"
     gene            13621..14805
                     /locus_tag="RJ239_000802"
     CDS             13621..14805
                     /locus_tag="RJ239_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein phosphatase"
                     /protein_id="HDV7330933.1"
                     /translation="MRILLVLRGNYYAGQEEFIKNNKLQNYTLDLNALRLLSGSVKNI
                     VSEYKILNVKNDEDLSKILLKLLEMRMQKGEFSIINAYNETLKIYKDLAKQYRYKIYV
                     IVFDSSLKQCQEKNLLEAKKNGYIIPYALLEKTQDLLKKNPKKYPILDSRDWKKCLYQ
                     MPNLSKYKKIHHIGDLQGCYSVLKEYIKTIKEDEFYIFLGDYINRGIENGKVIKFLLK
                     ICEKENVCLLEGNHERHLIKWANGELSNSKEFNENTLKDFRKEKLTPRDARKLYPHLK
                     ECLYYKFQNKFIFCSHGGVNFIPSKPEKISFIPSHDFIYGVGGYEDSQKVANQFCNFT
                     SDNLYQIFGHRNKEKLPMKIAKRVFLCEGKIDDGGYLRVVTLDEKGFECIEIKNQIYK
                     KK"
     gene            complement(14818..16176)
                     /locus_tag="RJ239_000803"
     CDS             complement(14818..16176)
                     /locus_tag="RJ239_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HDV7330934.1"
                     /translation="MDPSQVLDLNQTSTASFDAGYSILMVVVALALVFLNGFFVLSEF
                     SIVKVRRSKLEEMVKEKKAGAKKALEVTSRLDTYLSACQLGITLSSLALGWIGEPAIA
                     KMLEIPLINLGFSTVIIHTMAFIIAFSIITLLHVVLGELVPKSIAIAVADKAVLFIAR
                     PLHWFWMLFLPCIKIFDFLAAISLKLFGIKPAKESELTHSEEEIKIIASESQKGGVLD
                     EFETEIIRNAVDFSDTVAKEIMTPRKDMICLNKQKSYEENMQIICEHKHTRFPYIDGS
                     KDTILGMIHIRDIIQNELNHKSQNLDTFVKPLILVPENISISKVLVMMNKERSHTALV
                     VDEYGGTAGILTMEDIMEEIIGEIKSEHEEDSYKKLAENIYEFQGRCDIETVEEMLVI
                     NYDEDLEQVTIGGYVFNLLGRLPMVGDRIEDELCYYEVKKMDGNSIERVKVVKKTNKD
                     EE"
     gene            complement(16275..17480)
                     /locus_tag="RJ239_000804"
     CDS             complement(16275..17480)
                     /locus_tag="RJ239_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HDV7330935.1"
                     /translation="MIMFSSFFKSKKWALWAYLGLFLLLFFLYIQTSLNVAINSWYSD
                     FYNVLQKPKIELLDSNSTQKIEENLENNATLIQEANQRAEQNFQKANFINKGALYYYQ
                     NLLEYFFNSRAMIEKPNYSASDFYALILVFLAIAIPYVLIATINIYFASVYAFKWREA
                     MTFSYLKFWKNKDDNIEGSSQRIQEDTYNFSKIVESLGLSFIKALMTLVAFIPILWSL
                     SDVVSKALFANLSENSFFYFLKNIDGLLVYIALLISLGGLVVSWFVGIKLPGLEYNNQ
                     KAEAAFRKELVYAEDNRKEYAKNETMIELFTGLKFNYKRLFLHYGYFNIWLILFEQMI
                     VIVPFLIMAPGLFAGAIGLGIVMQINNAFDQVRSSFSIFITNWTTITQLRSIYKRLKE
                     FEKNISYKS"
     gene            complement(17526..18272)
                     /locus_tag="RJ239_000805"
     CDS             complement(17526..18272)
                     /locus_tag="RJ239_000805"
                     /inference="COORDINATES: protein motif:HMM:TIGR01352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDV7330936.1"
                     /translation="MKSSVIFGFVLSLILHTLVLMFFLFSFYTQEKSSGVDFKQGAEF
                     TSIMMVSEFPIGELKEVSIDQKKSNSQDKNKKQDERISFNSQDKNAVLKVQKKIEKQD
                     ENQAQKEIANASENSKFKNESLSAPLQSNKDKTQTIVSGNAKEQVKSYQALLMAHLTK
                     FKKYPQEAIMQKQEGVVRIRVSIDESGNVLSKELKKSCPYAALNDEALSLFKRASPLP
                     KPPKEMLKNGDKISFVMPIDYNIKDYLGKK"
     gene            complement(18274..18684)
                     /locus_tag="RJ239_000806"
     CDS             complement(18274..18684)
                     /locus_tag="RJ239_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HDV7330937.1"
                     /translation="MIKTEMAHKEEELSEINITPFIDIMLVLLIVFMAVTPLITSSIK
                     IELPKSSQQAEDKLKNPIILYLNTDNTLAINDDKLSLENLSSALDIKTKGNKEEIIYF
                     HIDKSVKYEDIMQVMQKLKENGYGKIALSSKKMD"
     gene            complement(18671..19432)
                     /locus_tag="RJ239_000807"
     CDS             complement(18671..19432)
                     /locus_tag="RJ239_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HDV7330938.1"
                     /translation="MLKKCFYFVFLLLNLNAEANATDTNLSFDSSKIETEAPKIELSL
                     SSLYQNADEVVKGVIYILVLFSILAWAVFISKLMQFYFMKKNLDLSIQKIKELKNLNE
                     LDQTKDFAGVLSLEIQDELEKSEYKNDHIKERIELRLQNTISKQITASKNGLSLLASI
                     GASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVAPGIAEALFATAFGLIAAIPAVLF
                     YNYLTRKNLKLMHHLDELANFVYILFHRSYFNDKN"
     gene            complement(19444..21711)
                     /locus_tag="RJ239_000808"
     CDS             complement(19444..21711)
                     /locus_tag="RJ239_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDV7330939.1"
                     /translation="MKKLSLFCAVGLCFASFAFSEELEFDSLEISGSKIKNDEKPFVT
                     PGATSTREGIGSDTQSIDSIVRSIPGTYTNTDQAQGTVQVNIRGMSGFGRVNTMIDGV
                     TQTFYGSASDDPARFHSQTGTSAFGAVIDTNFLIGVDVTRGTFEGVGGANALMGSANF
                     KTIGINDIVHDGNIFGFLGRFSYGSNGIGPSYMSAVAGKTELENNGYVGALFGYSAKR
                     ITQNYTVGGGGKIGSSMVDTDGDGIADTNIAPFDPDFLTQKPNSQLFKLEYVPNSFTN
                     TIFSYRRYQNELAGRKIHNDNYQLDFWHNPNEWLNVNTLIAYNQGIQTYGSKSTFAAN
                     DAIANTKAKNTATTFDISDTLEGEWHRFNLNIRFGANILLNDYKNTLNTSIQGVNSIP
                     FQPRGKQNLFTYYLDNSLNYGIFTLDTNVNLLDWNIKGHRPACDEVNFMCFPKAATDI
                     DKNGLRLNASVMLSAAIHELITPFVSFARTNRAPNVQEMFFSNNEGNGINSFLKPEQA
                     NTWQIGFNSFKHGLLKDDDRFGFKAVYYHTKIKDYIYNEQFYLEDPSKDPPSSQFYMH
                     LNSADDTIFKGVELELSYDLGFAYAKAMYSRQDTSSTISQTSGPLLGSFSASKIMELP
                     KDYANVELGFRLNDKISFGGIAKYTGKAKRVNPNTDDWNKDPNNPYYPKPTTQDLPKI
                     PIIVDLYWNIEWFKNLTMRAEVQNLFDKNYMDALNAYNSLDNQLQYNGAGDPIYLFSN
                     SARGRTFIVSFEYKY"
     gene            complement(21708..22517)
                     /locus_tag="RJ239_000809"
     CDS             complement(21708..22517)
                     /locus_tag="RJ239_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HDV7330940.1"
                     /translation="MLSACAVLQKSSPLQENKDFYILDTHTQKKISFEDMILELLKAD
                     VILLGEKHDEVKHKISQVMIFNALEGNLSSQNINFDVALEMLASTEQNHLDKAFKNKK
                     TIKANELTNALNWDKVWKWKDYEQFVNVVFYSKSKILGANLSRSEITSIYNGAQPLKG
                     YVSTTNEVKKQLFDIISLSHKLNPEENKELLDKLVEIQQFKDRRMADVLVHHVNKVLL
                     LAGSYHTSKKIGIPLHIQDFKSSKKIVVVNLSYGEIDLKDSDYVLIYKGEE"
BASE COUNT         8072 a         3366 c         3572 g         7544 t
ORIGIN      
        1 attgcaaaat ttaaattacg aacaattttt taacaatcct gtacaatttt atgagttaaa
       61 tttatttagt gatagccaac aacaaatcaa ctttgattat cttgtactag ataacaataa
      121 aatcaattct ttttatagca aaaaccaagt aaattttaat gaagaaaatt caacaataaa
      181 cttaaacata caaggagaat ccaatgaaat tgatattgat cttaaatctt tattgggtca
      241 gaatttaaat tttgacaaaa caaaatttaa tataaccata aataaatttc ttaactcaaa
      301 tttcaatatc tctcatttta ttcaaaaaaa tcttgatcta aaaatacaaa atttaattct
      361 tgaaaaaaat aaacaaaaca tcagtctaca aggcaattta aatatcaaca actcttatca
      421 agcaaaatta caagttatca gtttagatga gcctgatgaa atttttcctt ggacaaagga
      481 ttatggaggt ttaaatcaat attttttaaa agaaaataat aacttttttc taaatttatc
      541 ttatgatagc ttagccaatc ctcagctaaa aattaatggt agtgaatttt caaatatgga
      601 tttaaattaa tgagcctagc tttgaccttt cgccctgaaa attttgatga tattttagga
      661 caatatgagc ttatagaaat tttcaaaaaa tttactgctt tacaaaaact tcctcatagc
      721 attttttttg gaacagcagg ttctggaaaa acaacttttg ctagagttgt agccaaagaa
      781 tttggcttag atttttatga atttgatgga ggaaatttta aactcgaaga actaagaaaa
      841 attttagata attacaaaaa tagtctttat aaacctttaa tttttattga tgaaattcac
      901 cgccttagca aaacccaaca agaaatgctt ttaattccta tggaaaatta ccgtttaatt
      961 ttaatcggcg caagcactga aaatccctat tttgttttaa gttctggtat aagaagccgt
     1021 tccatgcttt ttgaatttaa atctttaggg gtaaaggaac ttgaaacttt actcttgcgt
     1081 gtacaagaaa aaatgaaatt taatattgat aaagaagcta aaaattttct acttaaaagt
     1141 gctgatgcaa gagctatgct aaatttgctt gaatttgtct tggttttaga tgaaaaacat
     1201 atcagtcttg aaaatcttaa aaaacttcgc aacaccataa gtagcgaagg tgctagctca
     1261 aaagatacac attatatttt agcaagtgca atgataaaaa gtttacgtgg aagtgacgtt
     1321 gatgcagcta tttattatct tgcaagactt attgatgcag gagaaagtgc ggattttatc
     1381 gctagacgtt tggtgatttt ttcaagtgaa gatgttggaa atgccgatcc aaatgctcta
     1441 aatttagcag tttcgactct agaagctgtt aaaaatatag gttatcctga agcaagaatt
     1501 atcctagccc aatgcgtagt ttatttagca agcacaatca aatctaatgc aagctacaaa
     1561 gctatcaatg aagctttaaa ctatgtaaaa aataatgaag ctttagaaat acctaattat
     1621 cttaacaaca atcatcaaga aaaacaaaac tatctttatc cgcatgattt tggtggctgg
     1681 gtagagcaaa aatatcttag taaaaattta aaattttatc atagcaaggg cttaggagaa
     1741 gaagcaaaat tgttagataa tttatataaa ttaaaaaacc ataaagctta attttattat
     1801 ttaaaattta caaaataaat gctaaaatca atattttatt ttcaaggaaa aagatgatta
     1861 aaataggaat ttatggcgct aaaggacgca tgggaaaaca gattgaagaa tgtttaaaaa
     1921 gcgaaacaca agcacaaatt tcgatacttt atgataaggg tggaaattta gaagagcttt
     1981 ttgaaaaaag tgatgtgatt attgattttt cttccccaag tggaactcat gagcttttaa
     2041 attatgcaag aactatgcct aaacctttgg taataggtac aacaggactt gatgagaaaa
     2101 ttttacattt gatgcaaagt gctagtgaag tgatgccgat tttttatgcg accaatatgt
     2161 ctttaggtgt tgcagtttta aactatcttg ctagcaaagc aagtcaaatg ttaaaaaatt
     2221 ttgatataga aattttagaa atgcatcatc gccataaaaa agatgcacca agtggtacgg
     2281 ctatgacttt agcccaaagt gtagcaaaag ctagaaattt agaacttgaa aaagtaagag
     2341 taagtggaag agatggcatc ataggtgaaa gaagcaaaga tgagattgct gtgatgagtt
     2401 taaggggtgg cgatatagta ggacgccata cagtaggttt ttatgaagat ggtgagtttt
     2461 tagaacttaa tcataccgct acttcaaggg caacttttgc taaaggtgcg attaaaatcg
     2521 ctatttggct tagtaagcaa gaagcaaaaa tgtattcaat taatgatttt ttaggaattt
     2581 aaaatgtgtg cagttgtagg agttatcaat tcaaaaaatg ctagcactta tgcgtattat
     2641 gcgctttttg ctatgcaaca ccgtgggcaa gaagcaagtg gtatcagtgt aagcaatggt
     2701 aaaaatatta agactattaa agccaaaggt gaagtgagtc aaatttttaa tcctgataat
     2761 ctaaaaactt tagagggtga aatcgctata gggcataatc gctattctac agcaggaaat
     2821 tcaagtttaa atgacgctca gcccatagca gctacttcag ttttaggtga tattgcttta
     2881 gcgcataatg gaaatttagt caataaagaa gaggtaagat caagacttat tcaagatggg
     2941 gctatttttc aaaccaatat ggacacagaa aatgttgtcc atcttatcgc aagaagtaag
     3001 caagaaagtc taaaagatag atttattgag agtttaaaag aatgtatagg agcttattgt
     3061 tttgttttag caagcaaaga taaactttat gttgtaagag atcctcatgg ggtgcgtcct
     3121 ttgtctttag ggcgtttaaa agatggaggc tatatagttg ctagtgaaac ttgtgctttt
     3181 gatcttatag aggctgaatt tattcgtgat gttaaaccag gggaaatgct tatttttact
     3241 cagggaaatg ataaatttga aagcatagaa cttttttctc aaactcctag aatttgcgct
     3301 tttgaataca tttattttgc tagacctgat agtatagtag aaggcaaaag cgtgtatgaa
     3361 gtgcgtaaaa aaatgggcga agctttagct aaaaaatttg cttataaagc agactttgtc
     3421 gtgcctgtgc cagatagtgg agtaagtgca gctataggtt ttgcgcaata tttacaaatc
     3481 cctcttgaaa tggcaatagt aagaaatcat tatgtaggaa gaacttttat agagccaact
     3541 caagagctta gaaatttaaa agtaaaatta aaacttaatc ctatgcgtaa agttttagaa
     3601 ggcaaagaaa tcgtagtcat tgatgatagc ttggtgcgtg gcactacttc taaaaaaata
     3661 atttctttgc ttcgtgctgc aggagcgagc aaaatccatc ttgccatagc ttgtcctgag
     3721 atcaaatttc ctgatactta tggcatagat actccaactt ttgaagaact tatcagtgca
     3781 aataaaaatg ctgaagaagt gcgtgaatat gtagaagctg atacgctaag ttttttaagc
     3841 atagaagagc taactcaaag cataggcgat gaaaggaaat attctttaat cagttttgat
     3901 ggagattatt ttattaaata attttatttt aaattaggat taggcaaagt tgcacttgca
     3961 cttcctacat ttatattttg agttggtggc aaaggagtat ttggtgtatc aatttgactt
     4021 aaaagctcta aagtttgatt aaattcgaag ctttcttcag gattttgtcc taagaatttt
     4081 tgcataaatt cttttttaga aatagcttca tcaagttctt tatcacttcc tttctgataa
     4141 gcaccgatgc gaagcaatac ttcattttct tttaaaagcg agtttaaacg cttaaatttt
     4201 cttgcccaaa gtttatgttc aggacttata atgtcactca tcacccttga agcagagttt
     4261 tgtatattaa taggaggata aattccaaag tctgttaatt cacggcttaa aacaatgtgt
     4321 ccatctaaga tagaacgact ttgatcggcg attggatcgc tcatatcatc accatccact
     4381 aaaacggtaa aaaaggctgt tatagtgcct ttaccttctt ctttaccggt tctttccatg
     4441 agttgaggca aaagacttaa aacacttggt ggataacctt tggttgtagg aggctctcca
     4501 agagctagtc caatttctct ttgtgccata gcaaaacgcg ttacactatc catgataaaa
     4561 agtacatctt tgccctgttc tttaaagtat tctgccacac tcattgcgca aaaagcaccg
     4621 tatttacgca tcaaagcact atcatcactt gtagcaacaa taatcactgt atcatcgagc
     4681 tttccgccta aatttttttg tataaattca ggaatttcac gccccctttc tcctatgagt
     4741 gccactactt ttataggagc tttggaattt ttaactatca ttcccataag agtggatttt
     4801 cctaccccac ttcctgcaaa aataccaagt ttttgtccta caccacaagt taaaagcgcg
     4861 tctatggttt taacacccac gggaaaaact tcttctataa gccctctttt cattgcatca
     4921 ataggtgcac gcattatagg catatatttg gttgcttcta tagctccttt accatctttt
     4981 ggacgcataa aaggatctac taccctgcct aaaagttcat cgctaacgcc tatttgcata
     5041 cctgcatcac ttataaaagc acgatcgcct attttaaaac cttctataaa agaaaatggg
     5101 cttaaatagc taaattgttc tttgatttct acaaccatag ctagagtgtt taaattttca
     5161 ttttcattag aaactaactt cactatatct ccaacccctg ttttaagccc acgaatttct
     5221 atacttgtag cagaaatttt tgtaatctct ccaaaaatag cacttaaatt ttctttgcca
     5281 agtttggagc gtagtttttc aagattcatt aaaatcttac ctgtttagca gagtttatga
     5341 gagaaaaaaa ttcctctctg gttttttcat tttttaagaa aattccacgt aaagctgaag
     5401 ttgtagtggt ggaattagct ttttgcactc cacgcatttc aacacacata tgtcttgctt
     5461 ctatgactac acccacacct tttgcatcga cattttccat taaagcttgt gcgatttgtt
     5521 cagtaagttg ttcttgaatt tgaagtcttc ttgcaaacac ttctacaagg cgtggaattt
     5581 tgcttaaacc tactactttt ttattaggga tataggctac atgagcacgc ccaaaaaaag
     5641 gcaaaagatg atgttcgcaa agactgtaaa attctatatc acgcactaaa accatttcat
     5701 tattagaact ttcaaataaa gcgtcattta aaatttcttt gacattttgc gtataaccac
     5761 tagtaagaaa ttcataagct ttaaaaacac gatttggcgt tttaataagc ccttcacgat
     5821 ttggattttc tcctataatt tcaagcatgg ttttaacaca atcttcaaat tttttttgca
     5881 catttttctc caaaaatatt ttttatattt taataataat gtaatattgc aattttatca
     5941 taaattactt taaaatttta tgcaagtaat aaggaaaaat ttgctatcat tgaaggcaaa
     6001 ttttatttta taaggaaaaa actatggaag taaaggcaaa gcaactagat tctgttaatg
     6061 cgactgctag tgtaaaaatt ccttcaggaa tgatcaaaag tgaagtagaa aatttagcaa
     6121 aaaaagcttc taaaagtgta aaaatggatg ggtttagacc aggaaaagtt cctgtaagtg
     6181 ccgtacttaa aagatatgaa agagagctca ctcaagatgc agaacaaaat ctttttaaat
     6241 ccgctgtaaa tagcgcttta caagaactta aaaaagaaaa taaagagctt gtaggtgagc
     6301 catattttga aaaatttgat cgtaaagatg gagaaattat tgctgaatta atactttctt
     6361 ttaaacctga aatcaaactt gagggttatg aaaaactcat ccctgaatat caaactccaa
     6421 aagtaagtaa aaaagaaatt gatgagaaaa aagatgagct tttaaagcgt tttgctactc
     6481 ctgaagctat aaaaacaaaa agagctttaa aagaaggtga ttttgcaaaa tttgattttg
     6541 aaggttttgt agatgataaa gcttttgaag gtggtaaagc tgaaaattat gttttagaaa
     6601 ttggttctaa gcaatttatt ccaggttttg aagatggtat ggtgggaatg aaaataggtg
     6661 aagaaaaaga tatcaaagta actttcccta aagaatacgg cgcagcgcat ttagcgggta
     6721 aagatgcagt atttaaagta aaactacatg aaattcaaga gcttaaaatt ccagaacttg
     6781 atgatgaaat gcttaaaaaa cttttaccag gagaagaaaa agctagtgtt gaagttttag
     6841 atgaaaaatt aaaagagcaa atcaaaaatg aaaaactttt caaacttgta aatgatgaat
     6901 taaaaggcaa atttgcagat gctttgattg aaaaatataa ttttgattta cctaaaggca
     6961 tagtagaaca agaaactgat atgcagatgc gtgcggcttt taatactttt agcgaaaaag
     7021 aaattgaaga gcttaaagca agtaaagaaa aatatcaaga aaaacgtgat tcttttaaag
     7081 aagaagcaca aaaaagtgta aaacttactt ttatcattga tgaacttgca aaattgcgta
     7141 agattgaagt aaatgatcaa gaattgattc aagcgattta ttttgaagca tatcgctatg
     7201 gtatgaatcc aaaagagcat ttagaaaact ataaaaaaca aggagctttg cctgctgtga
     7261 aaatggcttt aattgaagaa aaacttttta atgatatttt tataccaaaa acagaaaaat
     7321 cagaaaaagt gagcaaaaaa gagaaagaag ataaataatg tttattcctt atgttattga
     7381 aaaatctagt cgtggtgaaa gaagttatga catttattca cgccttttaa aagatagaat
     7441 tattatgcta agtggtgaaa ttcatgatga acttgccgct tctatcgtag cacaacttct
     7501 ttttttagaa gctgaagatc ctacaaaaga tatttatctt tatatcaatt ctccaggtgg
     7561 tgtaattaca agtggtttta gtatttatga tactatgaac tatatcaaac ctgatgtttg
     7621 tacgatttgt ataggacaag ctgcttctat gggagcattt ttgcttagtt gtggcgcaga
     7681 aggaaaacgt tttgctttgc ctaattcacg tattatgatt catcaacctt taggtggagc
     7741 tagaggtcaa gccacagata ttgaaattca agccaaagaa attttaagac tcaaaactat
     7801 acttaatgat attttggcaa aaaatactaa gcaaaaagtt gcaaaaatag caaaagatac
     7861 agaaagagat tttttcatgt cagcacaaga agctaaagaa tatgggctga ttgataaggt
     7921 tttggaaaaa agttttaaat gatttctttg gagatcattt aaaacaaagg ttttttaatg
     7981 gttagaaaaa ttatcaccta tcccaatcct agactttttt taaactctga aattgtaaat
     8041 aaatttgata cagaacttca caccttgctt gatgatatgt atgaaactat gatagcaagt
     8101 aatggagtag gtttagcagc tattcaagtg gatattcctt tgcgtgtttt acttgtaaat
     8161 atttttgatg aaaacgatga acaaaaaaaa gaagatttgc tagagattat caatcctgaa
     8221 attattcctt tagatgaaga aatgattact tgcacagaag ggtgtttgag tgtgccagat
     8281 ttttttgaag aagtgaaacg ctataatcat atcttgctta aatatcaaga tcgctttgga
     8341 gaatttaaag aacttgaagc aaaaggtttt ttagctgtgg ctattcaaca cgaaaatgat
     8401 catttaaatg gacatttatt tatagaaaaa atttcctttg ctaagcgtca aaaattcgat
     8461 aaagaattta agaaaaagaa gaaaaatcat aaaaaagaga aatgaaaaaa ctaaagtgca
     8521 taagctttca tgaaggctta gacattatag aggtagaatc cacttttaca agaggtttgc
     8581 caaatttaag catagtaggg cttgcaagta cagcgattaa ggaaagtgtc gaacgcatca
     8641 aagccacact tttaagttgt gattttgctt ttcctgctaa aaaaatcact atcaatctta
     8701 gtccttcagg catcccaaaa aagggatcgc attttgattt ggctatcgct ttattaatcc
     8761 ttttgcaaaa tgaagaatta gatgactttt ttgtagtagg agaattagga cttgatggaa
     8821 gtattaaaag cacaaatgag cttttttctt tgcttttgtt tctctctgct aaaattaaaa
     8881 aagctaagat cgttgttcca aaaagtatag cacaaaaagc ttccatgata ccaaatttag
     8941 aggtttatgg acttgaaaat ttaaatgaag caatagagtt ttttaaagaa aaaaattatg
     9001 aaaattttcg cttttctcac aatcatcctt tatttgcaaa ccctttacaa atagaaaatg
     9061 aaattttttt acaaaatatg gattttaaac ttgattttaa agatatcaaa gggcaggaaa
     9121 aagccaaaag agcttgtatg atagctgctt taggtatgca taatatctta tttgaaggaa
     9181 gtccaggaag tggtaaaagc atgtgtgcta aacgccttgt ttatatcatg ccccctcaaa
     9241 gtttaagtga aattttaatg caaaatgctt atatgtcttt agattcaaaa gattgtgaat
     9301 ttactaaaat tcgtgctttt cgtcatcctc atcatacttc tacaagagca agtatttttg
     9361 gcggaggaac aaaaaatgcc agaattggag aagtagcact tgcaaatggt ggagtattgt
     9421 tttttgatga atttccacat tttaacaagc aaatcataga gagtttaaga gaacctttag
     9481 aggatcataa aattcatatt tcaagagtaa attctaaaat cacttatgaa acaaaattta
     9541 gctttatagc tgcccaaaat ccttgtcctt gtggaaattt attctccaaa aatctttctt
     9601 gtgtttgtag tgaaaatgag attaaaaaat acaaaaatca catttcagct cctattatgg
     9661 ataggattga tctttatgta gctatggatg agatcagcaa ggatgataaa acgagtataa
     9721 gttctaaaga aatgagtgaa aaaattttac aagcttttat ttttagtaaa aaacgggggc
     9781 aaaaagaatt taatgggaaa ttaaaagatg aagatttaag tcgtttttgt gtattggaaa
     9841 aagatgccaa agatacgcta gatttagcaa tttcacgtta taatctttct ttgcgatcgc
     9901 ttaataaaat tttaaaagtt tcaagaagta tagcggattt agaacaaagt cttaatatta
     9961 gcaaaaccca tattttagaa gctttaagct ttagagcaag gaattaaaat ggaaaataaa
    10021 agtatagcta tctttataga tgcagaaaat atccctgcaa aatacgctaa aagtattttt
    10081 gatatcgctt cagattacgg agaggttatc attaaacgca tttatgggga ttggactcaa
    10141 aaaaatatac aaggttggag agagcaaatt gctgaatatt ctttaatcgc tatgcaacaa
    10201 tttaattttg cagccaacaa aaactcaagc gatatgtatt taatcactga aattatgtcc
    10261 atattttatg aaaaaaatat agatattttt gttattgttt caagcgatag tgattatact
    10321 tcactcattc aaaaattaag agaaaataaa aaacaagtta taggaatggg gcttgaaaag
    10381 tctataaaat cttatgtaaa tgcctttagt gaattttttt atttagataa agatgagagt
    10441 aaaaaagaag atattttaag taaggattat ttaagagctt taatcaatat caccgaacaa
    10501 cttatcgatg aaaaagggcg tgccgaatac gcacaaatcc gtactaatat gaaccgcaaa
    10561 tactcggatt ttcatccgca aaattatggt tttaagaatt ttcgtgcttt gatccagaaa
    10621 tttttaccca aaatgaaaaa atttgaagaa gaaagagaaa aaaatatata ttttttggtg
    10681 aaaaaagatt atgaaagcta ttattgataa tataaaaatt ttagaacaaa atgctataaa
    10741 taaaggctta gatgagctta ttttaatgga aaatgcggga ttaaatttag ccaagctaat
    10801 taaaaaagaa gctaaaaaaa ttcgcattca acgcaagatt agaaaagtaa aaatactttt
    10861 tttattaggc gggggtaaca acgcttcaga tggcttggtg gctttaagaa atttaaaaca
    10921 cgctaaagct tataaaatag gctttaaaga aaatacgctt tttaaaaaac aagagcaaat
    10981 tttacaaaat tatgctttta aattttgtaa aaaagaaccc aattttaaaa aatttcatat
    11041 tatcattgat tgtattttag gtacaggttc aaatcgttgt ttagatgaaa aaacaagttt
    11101 aattattcaa aaagttaatc aaagtaaggc tttaaaaata gcttgtgata tacctacaaa
    11161 tttgggattt tatccttgtt ttaaagctga tattacattt tgtatgggag ctttaaagga
    11221 aattttactt gaagattttg ctaaggaatt tgtaggaagg attaaaatag ccaatttagg
    11281 cattagatct aagaaatttt accctaattc tcaagctttt ttgcttgaaa aaaaagattt
    11341 aaaaactata gatagaaaaa tcaacgccaa taaaggaaat tttggccata tttatatagt
    11401 tgccaatgca agtgctggaa ctttagcagg acttggagcc ttaaattttg gagcaggtct
    11461 tgtttcttta gtagcacaaa aaagtttctc gcctcttttg atgttaaaag aaaaaattga
    11521 aaataatgca agtgctattg ctttaggtat ggggcttgaa aatttggatt ttctaaaaga
    11581 tgaaattttg caaaacactc ctttgatctt ggatgcaaac tgctttttaa gtgaagcttt
    11641 gctttggtat ttaaacagaa aagatgttgt tataacccct catccaaaag aatttataaa
    11701 actttataaa atgtgctttg atgagaattt agatatagaa acattgcaaa aaaatcgctt
    11761 tttctatgct agaaaatttt cacaaaatta tgattgtgtt cttgttttaa aaggagcaaa
    11821 tcctattatt gtgcaaaaag aaaaattatt tgttgtaaat ttaggaaatc aagccttagc
    11881 taaaggtggg agtggagatg ttttaagtgg aatgattgct gcacatttag gttttggttt
    11941 tagcgcttta gaagcagcaa aaaatgctac tttagctcat ggacttgttg caaaaaaata
    12001 taaatttaat aaaaatagct ttgacgcttt aaaacttatc aaaggattaa aatgcttgta
    12061 aaattagctg tactttttag tggaaatgga agtaatttag aaaatatttt agaaaaactt
    12121 cataaaaaaa ccatagggga aaatacctat gaagtagtac tttgcatttg taataaaaaa
    12181 gatgcttttg gtgtacaaag agcaaaaaaa tttggtcttg atactgtcat tgttgatcat
    12241 aaggcttata atactcgtga agaatttgat acgattttgg tacaaaaaat caaagaaagt
    12301 ggagcaaatc ttactgtatt agcaggtttt atgagaattt taagtcctgt ttttacaaaa
    12361 aatattaagg caattaacct tcatccttct ttattacccc tttttaaagg agcacatgcg
    12421 attaaagaaa gttatgaaag tgatatgaaa gtagctggtg tgagtgtgca ttgggtcagt
    12481 gaagaacttg atggtggaat gattatagct caaaaagctt ttgaaaaaag aaatttgagt
    12541 tttgaagaat ttgaagaaaa aattcatagt ctagaacatg aaattttacc cttaagtgtg
    12601 attgaaattt tttcttaaag aattaaaggt atttgcttta aaactataaa atatcgcttt
    12661 aaaaaatttt aaaattttca aggaaattta tgtttgaatg gatatttagt attgatgctt
    12721 ggattacttt agctacttta agtgctcttg aaattgtact agggatagat aatatcattt
    12781 ttttagctat tttagtaagc aaactacccc ctgaacatcg tgataaagga cgtatcttag
    12841 gtttagcttt tgcaatgatt acaagaattt tacttctttt atctcttttt tgggtaatga
    12901 aacttgtaac acctttgttt agtgtattgg gcaatgaaat ttcaggaaga gatctagttc
    12961 ttttactagg tgggcttttc ttgattgtaa agtctattaa agaaattaaa gagcaaattt
    13021 ctcatcaaga agaaagtcaa agtcatttta aagcaagcaa taaactttgg atagttgtag
    13081 ctgaaattgc tgtgattgac atagtgtttt cgcttgatag tgttattacc gcagtaggaa
    13141 ttgctcaaga tgtaaccatc atgattatcg ctgttattat cgcagtagct gtgatgcttt
    13201 ttgcttctaa acctatagca gattttgttg aaaaatatcc aagcattaaa attttagcct
    13261 tagctttttt ggtgctaata ggcgtagttt tagttgctga aagttttgat attcatattg
    13321 ataaggcata tatttatacc gctatggctt ttgctttagt ggtgcaaatt ttaaatattt
    13381 tagatcaaag aaaggaaaaa aatggctaaa gacgctaatg gaatagaact taacacaggt
    13441 gatagcgtga gtgtaataaa agatcttaag gttaaaggtg caagtacaac tttaaaacgt
    13501 ggaactacta taaaaaatat taagctcact tctaaagaag gtgaaattga ggctagagta
    13561 gataaatttg gcgttattgt tttaaaaact gaatttttaa agaaaatcta ggcaaagaat
    13621 gtgcgaatct tacttgtttt aagagggaat tattacgcag gacaagaaga atttatcaaa
    13681 aataataaac ttcaaaatta tacacttgat ttaaatgctt tgcgtctttt atcaggaagc
    13741 gttaaaaata tagtcagtga atataaaatt ttaaatgtta aaaatgatga agatttgagt
    13801 aaaattttac tcaaacttct agaaatgcgt atgcaaaaag gtgagtttag catcataaac
    13861 gcttacaacg aaacattaaa aatttataaa gacttagcta aacaatatcg ctataaaata
    13921 tatgttattg tttttgatag ctctttaaaa caatgtcaag aaaaaaatct tttagaagct
    13981 aaaaaaaatg gatatatcat tccttatgct cttttggaaa aaactcaaga tttgctcaaa
    14041 aaaaatccaa aaaaataccc aattttagac tcaagagact ggaaaaaatg tctttaccaa
    14101 atgccaaatt taagcaaata caaaaaaatt catcatatag gagatttaca aggttgctat
    14161 agtgttttaa aagaatacat taaaacaatc aaagaagatg aattttatat atttttggga
    14221 gattatatca acagaggtat agaaaatggc aaagtaataa aatttctttt aaaaatttgc
    14281 gaaaaagaaa acgtatgctt attagaagga aatcacgaaa gacatcttat aaaatgggct
    14341 aatggagaat tgtcaaattc caaagaattt aatgaaaata ctttaaagga ttttagaaaa
    14401 gaaaaactta ctccaagaga tgctagaaaa ctctatcctc atctaaaaga atgtttatac
    14461 tacaaattcc aaaataaatt catattttgt tcacatggag gagtaaattt tataccctcc
    14521 aaacctgaaa aaataagttt tataccaagc catgacttta tttatggtgt aggtggatat
    14581 gaagacagtc aaaaagtagc aaatcaattt tgtaatttca cctcggacaa tctttatcaa
    14641 atctttggac acagaaataa agaaaaactt cctatgaaaa tagccaaaag agtattttta
    14701 tgcgagggta aaatagatga tggtggatat ttacgcgtag ttacactaga tgaaaaaggt
    14761 tttgagtgta tagaaattaa aaaccaaatt tacaaaaaga aataagccta aagaggctta
    14821 ttcttcatct ttatttgttt ttttaaccac cttaacacgc tctatagaat tcccatccat
    14881 ttttttaact tcatagtaac aaagttcatc ttcaatgcga tctcctacca taggcaagcg
    14941 tcctaaaaga ttaaatacat aaccacctat agtaacttgt tctaaatcct catcatagtt
    15001 tattacaagc atttcttcaa cagtttctat atcgcatcgt ccttgaaatt catagatatt
    15061 ttcagcaagt tttttatagc tgtcttcttc atgctcgctt ttaatttcgc caataatttc
    15121 ttccatgata tcttccatgg ttaaaattcc agcagttcca ccatactcat caactactaa
    15181 tgcagtatga gagcgttctt tattcatcat tacaagtact tttgaaatgc tgatattttc
    15241 aggaaccaaa atcaaaggtt taacaaaagt atctaaattt tgacttttat ggtttaattc
    15301 attttgtatt atatctcgta tgtgtatcat acctaaaata gtatctttag agccatcaat
    15361 ataaggaaag cgagtatgtt tatgctcaca aatgatttgc atattttctt cgtaactttt
    15421 ttgtttattt agacaaatca tatcttttct aggagtcata atctctttag caacagtatc
    15481 tgaaaaatca acagcattgc gtatgatctc tgtttcaaat tcatctaaaa ctccaccttt
    15541 ttgactctca cttgctatga ttttaatttc ttcttcgcta tgagttagct cgctttcttt
    15601 agcaggtttt attccaaaaa gtttcaaact tatagctgct aaaaaatcga aaattttaat
    15661 acaaggcaaa aagagcatcc aaaaccaatg aagcggtcta gctataaata aaaccgcttt
    15721 atctgcaact gcaatagcta tactttttgg cacaagttct cctaaaacca catgtaaaag
    15781 agtaataatg ctaaaagcaa taatgaaagc catagtatgg ataataacag tgctaaaacc
    15841 aagattaata agcggaattt ctagcatttt tgcaatagca ggctcaccta tccaaccaag
    15901 agctagagaa cttaaagtga ttcctaattg acaagcacta agataagtat caagtcttga
    15961 agtaacctcc aaagctttct tggcaccagc ttttttttct tttaccatct cttcaagctt
    16021 ggaacgacgt actttaacaa tactaaattc agacaaaaca aaaaaaccat ttaaaaacac
    16081 tagagcaagt gcaacaacaa ccataagtat agaatatcct gcatcaaaag atgctgtaga
    16141 agtttggttt aaatccaaaa cctgactggg gtccaatgaa gctccttaag aaataaaata
    16201 ttattaaacc ttattataca caattaaaag taaatttaat atttgaattt tttcttgtat
    16261 tttataagaa aaaactaaga cttataagaa atatttttct caaattcttt taaacgctta
    16321 tatatacttc taagttgagt gatagttgtc cagtttgtga taaaaatact aaaagagctt
    16381 cgcacttgat caaatgcatt attaatctgc attacaatac caagtcctat agctccagca
    16441 aaaagccctg gtgccatgat taaaaatggc actataacta tcatttgctc aaataaaatg
    16501 agccaaatat taaaatatcc ataatgtaaa aaaagtcttt tatagttaaa tttaagccct
    16561 gtaaaaagct ctatcatagt ctcattttta gcgtattctt tgcgattatc ctcagcataa
    16621 acaagctctt ttctaaaagc tgcttcagct ttttgattgt tatattcaag tccaggaagc
    16681 ttaataccta caaaccatga cacaaccaag cctcctaaag aaatcaaaag tgcaatataa
    16741 acaagcaaac catcaatgtt ttttaaaaaa taaaaaaaag aattttcgct taaatttgca
    16801 aataaagctt tactcacaac atcacttaaa ctccataaaa tcggaataaa tgctacaagg
    16861 gtcatcaaag cttttataaa actaagtcct aaactctcta cgattttaga aaaattataa
    16921 gtatcttctt gaattctttg cgaacttcct tctatattat catctttatt tttccaaaat
    16981 tttaaataag aaaaagtcat agcctcacgc cacttaaaag catagacgct agcaaaatag
    17041 atattaattg tagcgattaa aacataagga atagcaatag ccaaaaaaac taaaatcaaa
    17101 gcataaaaat cacttgctga ataatttggc ttttcaatca tagccctaga gttgaaaaaa
    17161 tattctaata aattttgata ataatacaat gcgcctttat tgataaaatt agctttttgg
    17221 aaattttgct cagctctttg attagcctct tggattaaag tggcattatt ttcaagattt
    17281 tcttctattt tttgcgtaga attagaatcc aaaagttcta tttttggctt ttgtaaaaca
    17341 ttgtaaaaat cactatacca tgaattgatc gcaacattta agcttgtttg tatatataag
    17401 aaaaataaca gtaaaaaaag tcccaaataa gcccataaag cccatttttt acttttaaaa
    17461 aacgaagaga acataatcat cacctttaaa ataaaaattc taataaactt tttttaatga
    17521 aaagtttatt ttttacctaa atagtcttta atattgtaat caataggcat aacaaaactg
    17581 attttatcac cattttttaa catttcttta ggcggttttg gcaatggaga agctctttta
    17641 aataaactta aagcttcatc attgagcgct gcataagggc aagatttttt aagctctttg
    17701 cttaagacat ttccgctttc atcaatgctt acgcgaattc ttacaacgcc ttcttgtttt
    17761 tgcattatcg cttcttgagg atatttttta aatttagtca aatgagccat aagcaaagct
    17821 tgatagcttt taacttgttc tttggcattg ccacttacta tagtttgtgt tttatcttta
    17881 ttactttgta gcggagcact gagcgattca tttttaaatt ttgaattttc acttgcatta
    17941 gctatttctt tttgagcttg gttttcatct tgcttttcaa tctttttttg aacttttaat
    18001 acagcatttt tatcttgaga attaaaactt attctttcgt cttgtttttt gtttttatct
    18061 tgagaattac tctttttttg atcaatcgaa acttctttta attccccgat aggaaactct
    18121 gataccatca taatggaagt aaattccgct ccttgtttaa aatcaacacc acttgatttt
    18181 tcttgagtat aaaaagaaaa aaggaaaaac attaatacta aagtatgcaa tatcaaactt
    18241 aacacaaacc caaaaatcac actagacttc atactaatcc atctttttac ttgaaagagc
    18301 tatttttcca tagccattct cttttaattt ttgcattact tgcataatat cttcatactt
    18361 tacactttta tcgatatgaa aataaataat ttcttcttta ttgcctttgg tttttatatc
    18421 taaagcactt gaaagatttt ctaggcttaa tttatcatca ttaatagcca aagtattatc
    18481 agtatttaaa taaagtatga tgggattttt aagcttatcc tctgcttgct gcgaactctt
    18541 gggtaattct attttgatag aacttgtgat aagaggagta acagccataa aaacaatcaa
    18601 taatacaagc ataatatcta taaaaggagt tatattgatc tcacttaact cctcttcttt
    18661 gtgagccatt tcagttttta tcattaaaat aactcctatg aaaaagtata tagacaaaat
    18721 ttgcaagctc atctaaatgg tgcataagtt ttaaattttt tcttgtaaga taattataaa
    18781 aaagcaccgc agggatagca gctatcaagc caaaagctgt agcaaacaag gcttcagcta
    18841 taccaggcgc aacgactgcc aaagaagcat tgccaagatt tgctatacct ataaatgcat
    18901 tcataattcc ccaaactgtt ccaaaaagcc ctataaaagg tgcgctagca cctatgctcg
    18961 caagcaaact caagccattt ttgcttgctg tgatttgctt tgagatggta ttttgcaaac
    19021 gcaattctat acgctctttt atgtgatcat ttttatattc acttttttca agctcatctt
    19081 gaatttctaa agataaaaca cctgcaaaat cttttgtctg atctaattca ttgagatttt
    19141 ttaattcttt tatcttttgt atagacaagt ctagattttt tttcataaaa taaaattgca
    19201 taagcttaga aataaaaact gcccatgcta aaatggaaaa taaaaccaat atataaataa
    19261 caccttttac cacctcatca gcattttgat aaagactaga aagagaaagc tctattttag
    19321 gtgcttcggt ttctatctta gaagaatcaa aagataaatt tgtatctgtt gcatttgctt
    19381 ctgcatttaa atttaacaat aaaaaaacaa aataaaaaca tttttttaac atttgtatat
    19441 tccttaatat ttatattcaa aacttactat aaaagtacga ccgcgagcag aattgctaaa
    19501 aagatagata ggatcacctg ctccattata ttgaagctga ttatctaagg aattataagc
    19561 atttaaggca tccatgtagt ttttatcaaa taaattttgc acctctgctc tcattgtgag
    19621 gtttttaaac cattctatat tccaatataa atctactata ataggaattt ttggtaagtc
    19681 ttgtgtggtt ggtttaggat aataaggatt gtttggatcc ttattccaat catctgtatt
    19741 tggatttacc ctttttgctt tgcctgtgta ttttgctata ccaccaaagc ttattttatc
    19801 atttaaccta aagccaagct ctacatttgc ataatctttt ggaagctcca tgattttact
    19861 tgccgaaaaa gagccaagaa gaggtcctga agtttgagaa atagtcgaac ttgtatcttg
    19921 tcttgaatac atagctttag cataagcaaa acccaagtca tagcttaatt ctaactccac
    19981 acccttaaat atggtatcat cagctgaatt taagtgcata taaaattgcg agcttggagg
    20041 atctttactt ggatcttcaa gataaaattg ttcattataa atataatctt ttatttttgt
    20101 atgataatac acggctttaa aaccaaagcg atcatcatct tttaaaagtc catgtttaaa
    20161 agaattaaaa cctatttgcc aagtattggc ttgttctggt tttaagaaag aattgatacc
    20221 attgccttcg ttatttgaga aaaacatttc ttgcacatta ggggctctat ttgttctcgc
    20281 aaaacttaca aagggtgtaa taagctcgtg tatggcagct gaaagcatga cagaagcatt
    20341 caggcgaagt ccatttttat ctatatctgt cgccgctttt ggaaaacaca taaaatttac
    20401 ttcatcgcaa gcaggtctgt gtcctttgat attccaatct aaaagattca cattggtatc
    20461 aagtgtaaag ataccataat ttagactatt atcaagataa taagtaaaaa gattttgttt
    20521 tccacgaggc tgaaaaggta tagaatttac tccttgaatt gatgtattta aggtattttt
    20581 ataatcatta agcaaaatat ttgctccaaa gcgtatgttt agattaaatc tatgccattc
    20641 accctctaaa gtatcactta tatcaaaagt agtggcagta ttttttgcct ttgtgttagc
    20701 tatggcatcg tttgccgcaa aagtagattt tgatccatag gtttgtatgc cttgattgta
    20761 ggcaataagc gtatttacat taagccactc attagggttg tgccaaaaat caagttgata
    20821 attgtcattg tgtatttttc taccggcaag ttcgttttga tatctacgat aagaaaatat
    20881 agtgtttgta aaagaatttg ggacatattc gagtttaaaa agttgagagt ttggtttttg
    20941 ggttaaaaaa tctggatcaa aaggagcgat attggtatca gctataccat ctccatcagt
    21001 atcaaccata ctactaccta tcttgccacc cccgcctaca gtgtaatttt gagtaattct
    21061 ctttgcgcta taaccaaaaa gcgcgcccac atatccatta ttttcaagtt cagtctttcc
    21121 agccactgca ctcatataac ttggtccgat tccattgctt ccataagaaa atcgtcctaa
    21181 aaatccaaag atattgccat catgtacaat atcatttata cctatggtct taaaatttgc
    21241 tgatcccatc aaggcatttg ctccacctac tccttcaaaa gttccccttg taacatcaac
    21301 tccgattaag aaatttgtat caataacagc tccaaaagct gaagttcccg tttgtgaatg
    21361 aaatctagct ggatcatctg atgcactacc ataaaaagtt tgagtaacac cgtcaatcat
    21421 ggtattaaca cgcccaaaac cactcatacc acgaatattt acttgaactg tgccttgagc
    21481 ttgatctgtg tttgtgtagg ttccaggtat actacgcact atagaatcta tactttgtgt
    21541 atctgaacct ataccctctc ttgtgcttgt tgccccagga gttacaaaag gtttttcatc
    21601 gtttttgatt tttgaacctg aaatttcaag actatcaaat tctaattctt cagaaaaagc
    21661 aaaactagca aaacataaac ctacagcaca aaataaactt aattttttca ttcctccccc
    21721 ttataaatca aaacataatc actgtctttt aaatctattt ctccatagct taaattcact
    21781 acaactattt ttttactgct tttaaaatct tgtatatgta aaggaattcc tattttttta
    21841 cttgtatgat agcttccagc tagcaataaa actttattta catgatgaac caatacatca
    21901 gccatacgcc tgtctttgaa ttgttgaatt tccaccaatt tatctagtaa ttctttattt
    21961 tcttcaggat ttagcttatg gcttaaggat ataatgtcaa aaagttgttt ttttacttca
    22021 tttgtggttg aaacataacc ctttaagggc tgagccccat tataaatgct tgtaatttct
    22081 gagcgtgaaa gatttgcacc taatattttt gactttgaat aaaaaaccac attgacaaat
    22141 tgctcataat ctttccattt ccagacctta tcccaattta atgcattagt aagttcattg
    22201 gctttaatgg tttttttatt tttaaaagct ttatctaagt gattttgctc tgtgcttgct
    22261 aacatttcta aagctacatc aaagtttata ttttgagaac ttaaatttcc ttctaaggca
    22321 ttaaaaatca taacttgact tatcttatgt ttaacctcat cgtgtttttc gccaagcagt
    22381 atcacatctg cttttagcaa ttctaaaatc atatcttcaa aagaaatctt tttttgagta
    22441 tgcgtatcaa gtatataaaa atctttattt tcttgaagtg gagatgattt ttgcaaaaca
    22501 gcacaagcgc tcaacataaa gcttataaat agaatgctta aaatagtata aaat
//
LOCUS       DAPIVO010000023        22539 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.023, whole genome shotgun sequence.
ACCESSION   DAPIVO010000023 DAPIVO010000000
VERSION     DAPIVO010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22539)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22539)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22539
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.023"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            106..1914
                     /locus_tag="RJ239_000810"
     CDS             106..1914
                     /locus_tag="RJ239_000810"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HDV7330941.1"
                     /translation="MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSC
                     AHLMAQAIKSLYPEAKFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIE
                     ISKYEITKSEALAKFQNDDLKQEVLLRIPDRAVSIYKQGEFEDLCRGPHVPNTKFLRF
                     FKLTRVAGAYLGGDEKREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKL
                     FTFDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHY
                     ANYKENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSG
                     VLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEMEISTKPEKA
                     IGDDEIWEIATKALKEALDEQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQV
                     DFNLPSRFKLEYTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVG
                     IVPIGEAHIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEV
                     AKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEVHF"
     gene            1911..2429
                     /locus_tag="RJ239_000811"
     CDS             1911..2429
                     /locus_tag="RJ239_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HDV7330942.1"
                     /translation="MSKEKEVLLNEEIRADEIRCVGDDGKVYGIISSDEALEIANRLG
                     LDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKIAQNDIN
                     YKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENEANRDKEPNFEG
                     RYVNMLVTPKKA"
     gene            2468..3559
                     /locus_tag="RJ239_000812"
     CDS             2468..3559
                     /locus_tag="RJ239_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HDV7330943.1"
                     /translation="MKENPSFLKEQIITYLGNKRALLSFLNNGFKVAKKELGKDKFSF
                     CDIFSGSGVVSRFAKAHSNYILANDLEDYSKLINECYLANKDKDLLQNIKKYYKNLIQ
                     NLDFQKGFISELYAPKDDDDIKKNERVFYTFKNALYLDTIRQKIENEIPKELRHFFIA
                     PLIYEASVHSNTSGVFKGFYKGKDGIGKFGGEGQNALKRIKGEIELKMPIFSNFSCEF
                     EVMQKDANMLAKELDFFDVVYLDPPYNQHPYSSNYFMLNLIANYKKPEEISKISGIPK
                     DWNRSTFNKSKFAQDALFELINDLKARVILLSYNCEGFVKKEIFLKRLSTLGKCRILE
                     QKYNTFRASRNLKNRNIHLHEQLYILVKN"
     gene            3601..7063
                     /locus_tag="RJ239_000813"
                     /pseudo
     CDS             3601..7063
                     /locus_tag="RJ239_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_172669436.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            7144..8172
                     /locus_tag="RJ239_000814"
     CDS             7144..8172
                     /locus_tag="RJ239_000814"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HDV7330944.1"
                     /translation="MKIKVGILGASGYAGNELVRILLNHPKVEISYLGSSSSVGQNYQ
                     DLYPNTPLNLCFENKNLDELELDLLFLATPHKFSAKLLNENLLKKMKIIDLSADFRLK
                     NPKDYELWYKFTHPNQELLQNAVYGLCELYKEEIKKASLVANPGCYTTCSILSLYPLF
                     KEKIIDFSSVIIDAKSGVSGAGRSAKVENLFCEVNENIKAYNLALHRHTPEIEEHLSY
                     AAKEKITLQFTPHLVPMQRGILISAYANLKEDLQEQDIRDIYTKYYQNNKFIRLLPPQ
                     SLPQTRWVKSSNFADINFSVDQRTKRVIVLGAIDNLIKGAAGQAVQNMNLMFDFDEDE
                     GLKFFANL"
     gene            8182..8628
                     /locus_tag="RJ239_000815"
     CDS             8182..8628
                     /locus_tag="RJ239_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV7330945.1"
                     /translation="MLIRAMQKSDYEAVYKLWCEIKGFGIRSIDDSKENIENFLDRNP
                     NLSVVAVIDEEIVGSILCGHDGRTGGFYHVCVHKDHRKKGIAHEMAKFCLEALKAQKI
                     NKIALIAFKNNDLGNEFWKHYGFTLREDANYYDLSLNEYNQTSFNA"
     gene            8632..9477
                     /gene="argB"
                     /locus_tag="RJ239_000816"
     CDS             8632..9477
                     /gene="argB"
                     /locus_tag="RJ239_000816"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HDV7330946.1"
                     /translation="MIMQKYLEKANVLIEALPYIRKFNSKIILIKYGGSAMENEELKH
                     CVMQDIALLKLVGLKPIIVHGGGKDISAMCEKLGVKSEFKNGLRVSDKATIEVASMVL
                     NHINKNLVHSLQNLGVKAIGLCGKDGALLECVKKDENLAFVGTIQKVNSKILEELLEK
                     DFLPIIAPIGMDENFNTYNINADDAACAIAKALRAEKLAFLTDTAGLYEDFNDKNSLI
                     SKISLEQAKILAPKIEGGMHVKLKSCIDACENGVKKVHILDGRVKHSLLLEFFTDEGI
                     GTLVG"
     gene            9481..10668
                     /locus_tag="RJ239_000817"
     CDS             9481..10668
                     /locus_tag="RJ239_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HDV7330947.1"
                     /translation="MKMDYKEQSHIIPTYKRFDIVLEKGQGVYLFDDKAKKYLDFSSG
                     IGVCALGYNHAKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASALERVFFTNSG
                     TESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISG
                     VKFAKYNDISSVEKLVNEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIA
                     DEIQCGMGRSGKFFAYEHAQILPDIMTSAKALGCGLSVGAFVINQKVASNSLEAGDHG
                     STYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGF
                     MQGLSLDKSVKVAKVIQKCQENALLLISCGENDLRFLPPLILQKEHIDEMSEKLRKAL
                     KSF"
     gene            complement(10687..11316)
                     /locus_tag="RJ239_000818"
     CDS             complement(10687..11316)
                     /locus_tag="RJ239_000818"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HDV7330948.1"
                     /translation="MNAFEQKRCQNMAEEIAQKVFINEELFNAFCQIPREIFSPLKAH
                     AYRLDALPLANSQWISSPLTVAKMTMALDFKNADSILEIGCGSGYQAAILSKVIRRVF
                     TIERIENLAKKAAQTFRELELFNINVKFDDGQNGWKNYAPYDRILFSAYATQIPEILL
                     DQLSDDGILVAPILHNGKQFITRLRKNGTNLQKEILEECLFVPIVDGKE"
     gene            11405..11953
                     /locus_tag="RJ239_000819"
     CDS             11405..11953
                     /locus_tag="RJ239_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HDV7330949.1"
                     /translation="MLIKFKNHSPKLGQNVFVAEGAKIIGEIEIGDESSIWFNCVLRA
                     DVNFIKIGKRTNIQDLSTVHVWHREFDEKGKLKDAGFPTIIGDDVTIGHNCVIHACVI
                     KNRVLIGMNAVIMDNALIEEDSIVGAGSVVTKGKKFPPRSLILGNPAKFVRELNDEEV
                     SFLKQSALNYVDFKNEFLKDLQ"
     gene            complement(11922..13295)
                     /locus_tag="RJ239_000820"
     CDS             complement(11922..13295)
                     /locus_tag="RJ239_000820"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HDV7330950.1"
                     /translation="MMTSKTSLALLCDFYEFTMSQGYFKNNKKDQICYFDIFFRKIPD
                     SGSFAIFAGLEDILDFVENLSFDAEDIEFLRKQGIFDTEFLDFLANFKFKGEIYAMRE
                     GEVIFPNEPLLCIKATTIEAQLLETFLLLSLNHQSLIATKTNRIVRAAKDSKILEFGS
                     RRAQGSEAALKGARAAFIGGCIGSACTLAGKIYNIPINGTMAHSWVQMFENELEAFKA
                     YVKIYPKNPVFLIDTYDCLNSGLKNAIKVFKEFGIQEGGVRIDSGNLLELSLKIRQEL
                     DQAGLQKCKIIVSNALDEWSIKKLKEQNAPIDIFGVGERLITASSDPIFSCVYKLAAL
                     EDQGIKPKIKISENNEKSTLPHFKKLFRVYDKNTQKILFDELYVFDENPNQDENLERK
                     ELLELVYKEKRLLKKSSLNTIQDYTKEQISKLDESFLDLDRFVKFEVKLSPKLQNITE
                     DLLKTRF"
     gene            complement(13282..14304)
                     /locus_tag="RJ239_000821"
     CDS             complement(13282..14304)
                     /locus_tag="RJ239_000821"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HDV7330951.1"
                     /translation="MQRKRIYNPSSNETLGDRKVFDGNPHGILNFTKAKYTWALKLWD
                     LMEANTWFPKEVDTTKDALDYRCNLTAGEKRMYDLVWSQLISMDSFQTNNLADNINPY
                     ITAPEINAVLARQAYEEANHSKSYAVMVEAICDNTDLIYEMEKHDETLREKNDFISSI
                     YEELAGDVDDNKLLLAMVANQILEGVYFYSGFTAIYALARAGKMLGSAQMIRFIQRDE
                     ITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFTD
                     DIIEEYIHYLVDQRLSAINLDKLYNAKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS
                     ISFDDF"
     gene            complement(14318..14728)
                     /locus_tag="RJ239_000822"
     CDS             complement(14318..14728)
                     /locus_tag="RJ239_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HDV7330952.1"
                     /translation="MKTKAKISSRWLRFRALLIDIFLIYVPILYLFYFLLGSKEAFLN
                     NHFITTLCTFLFGLIQAIFLTKKAQSPGLKAYDLYLIDIKTGKKLSFLRILLRYVIFI
                     ISFGLLFGLFVSFVRKDRLNLHDILTQSCIATKA"
     gene            complement(14729..15337)
                     /gene="pyrE"
                     /locus_tag="RJ239_000823"
     CDS             complement(14729..15337)
                     /gene="pyrE"
                     /locus_tag="RJ239_000823"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HDV7330953.1"
                     /translation="MNLEQIYKDCGAYLEGHFLLSSGKHSQFYLQSAKVLEDPKLAAK
                     LCDELAKIIASYKIEFDSICSPALGGILAGYELARACSKRFIFTERVNKEMTLRRGFE
                     VKKGEKFIICEDIITTGGSALESAKIIESLGGIVVGFAALANRGFCAVENLKSPRKDN
                     AKLPENLPLFTLGNFEFEIYDETNCPLCKKGNKAIKPGSRGN"
     gene            complement(15340..15903)
                     /gene="frr"
                     /locus_tag="RJ239_000824"
     CDS             complement(15340..15903)
                     /gene="frr"
                     /locus_tag="RJ239_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HDV7330954.1"
                     /translation="MIMLNEIFNKQKTQSEKSLEALKKDFTTLRTGKVNIHILDHITV
                     DYYGTQTPLNQVATVLASDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKL
                     FFPPMTREQREENVKQAKAMGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYD
                     EVQKLTDTYTTKIDEGVKSKESELLKV"
     gene            complement(15913..16284)
                     /gene="secG"
                     /locus_tag="RJ239_000825"
     CDS             complement(15913..16284)
                     /gene="secG"
                     /locus_tag="RJ239_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HDV7330955.1"
                     /translation="MITLLIILQFIIVVVICIAVLLQKSSSIGLGAYSGSNESLFGAK
                     GPAGFLAKFTFVMGILLIANTIGLGYLYNKASKDSLAEKIKVENNNTTIPSAPIVPTT
                     PNTNSIAPSAPQLPSDVNSSK"
     gene            complement(16388..17083)
                     /locus_tag="RJ239_000826"
     CDS             complement(16388..17083)
                     /locus_tag="RJ239_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HDV7330956.1"
                     /translation="MSLYDRDYSRSKEFENTRSSELSIFIKQTYQLFAASLLAATVGA
                     YVGIFALASFFIQSQVTFWILFAVEIGLLFALQWKKREAPLNLVLLFGFTFCSGLTLT
                     PLLISVLALPAGGIIIAQAFALTTVAFAGLSVFAMNTKKDFTVMGKALFIVLIVIVAA
                     SLLNLFFQSSIVNLAISAVAAILFSFYILYDTQNIIRGNYETPIEGAVALYLDFVNLF
                     VSLLNILRSFNSR"
     gene            17243..17878
                     /locus_tag="RJ239_000827"
     CDS             17243..17878
                     /locus_tag="RJ239_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HDV7330957.1"
                     /translation="MENLISGAIKFMQEDFKEHEELFESLKNKQNPHTLFIGCSDSRV
                     IPNLITNTGPGELFVIRNIANIVPPYRVGEDYLATTSAIEYALNSLHIKNIVVCGHSN
                     CGGCNALYYSDEELNKIPNVKKWLTMLDPIKKDVMIFARDDLAMRSWLTEKLNLVNSL
                     QNILTYPGVQEALDEGKIEVHAWYYIIETGEIYEYDFKAKIFTLIQDRKVQ"
     gene            17875..19758
                     /locus_tag="RJ239_000828"
     CDS             17875..19758
                     /locus_tag="RJ239_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HDV7330958.1"
                     /translation="MKKIIFSLCFFILHLGAQEFKFIDANISKEDEGIYALVEKYVDL
                     NNQIKEFKKNNDENSSTFNGILSEFEKDKKTILAKIPDMIVGQKINEEAVARFLKAKE
                     KLLDVQKKNINKPYIYTDATLNLVYFNIVESFYSSLFEVEKLFKNTASSEDLIATVDK
                     AMENLQNSSNVNLDSFKSKITNPEELEKITLKERYISNAVDSYSEILKYLRSNADLLE
                     SNYIFSLLELQVWIDRINEAIGVSFVNIGKIVISALVLVFFISLRRFFANIVYFFLVQ
                     LFYRNKNDVDDIKVIFIENIKKPVGFLLIVYAISLCLTIATYPAPLSVNLSNFFHIVY
                     AVLIAWLILRMLDGYGVVLVSKLAQKSGKKEVVNLIIKILYFVIIIIALLYILAQLGF
                     NISAIIASLGIGGLAVALAAKDIIANFFASILLLFDNSFNQGDWVEVSGIEGTVVETG
                     LRKTTIRTFDNCLVFLPNSTIMGANIKNWSKRRMGRHVRMYLGVGYDATPEKLEQCVK
                     DLREFLHTSDLVAHDEDSALKYGDHTTKYRQNLVSINDLEGYKNACYVALSEFADSSI
                     NIELYFYIKEIGGKDFREARQSLMLEFMRIIEKNGLTFAFPSRSIYIENLPPLDLQAK
                     AIK"
     gene            complement(19781..20752)
                     /locus_tag="RJ239_000829"
     CDS             complement(19781..20752)
                     /locus_tag="RJ239_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly scaffold protein
                     NifU"
                     /protein_id="HDV7330959.1"
                     /translation="MGKNSLIGGSIWDEYSQKVQDRMNNPQHMGEFSEEDAKARNAKL
                     IVADFGAESCGDAVRLFWLVDEKTDKIIDAKFKSFGCGTAIASSDTMVDLCIGKTVDE
                     AVKITNLDVEFAMRDNPETPAVPPQKMHCSVMAYDVIKQAAAHYKGISPEDFEDQIIV
                     CECARVSLGTIKEVIKLNDLHSVEEITQYTKAGAFCKSCIKPGGHEKRDYYLVDILAE
                     TRAEIDREKLKNTMKSDVAFDEMTVVGQLKAVESVLDAEIRPMLHNDGGDLEVIDIQK
                     AEGAAIDVYIRYLGACSGCSSGSGATLYAIETILQEELSPNIRVMPV"
     gene            complement(20762..21943)
                     /locus_tag="RJ239_000830"
     CDS             complement(20762..21943)
                     /locus_tag="RJ239_000830"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifS family cysteine desulfurase"
                     /protein_id="HDV7330960.1"
                     /translation="MKVYLDNNATTMLDPNAYELMLPFLKDMYGNPNSLHQYGSATHP
                     ALREALDKLYAGLGANDLDDIVVTSCATESINWVLKGVYFDHILDKERNEVIISSVEH
                     PAVTAAAYFLKSLGVKVIELPVNEEGVSTVEDLRKVISDKTALVSVMWANNETGMIFD
                     IKAMAELAHEFGALFHTDATQAVGKIKVNLTQVGVDFASFSAHKFHGPKGVGGLFIKK
                     GLKLTPLLHGGEHMGGRRSGTLNVPYIVAMGEALRIANTMLDFEDSHIRRLRDKLEDQ
                     ILALPDTTVVGKREHRVPNTILASIKGVEGEAMLWDLNKNGIAASTGSACASEALESN
                     PIMEAIGAEHDLAHTALRLSLSRFNTEEEIDYAAKQIKNATQRLRAISCTYAYNPNNY
                     K"
     gene            complement(22121..22522)
                     /locus_tag="RJ239_000831"
     CDS             complement(22121..22522)
                     /locus_tag="RJ239_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HDV7330961.1"
                     /translation="MTYNEKIISMNNDLLDHQHKELFEISKKLSLMNQRHVGTKELKI
                     VLRELLIMINRHFSDEEAFMREIEYPYINHHTRIHRKIILEIEEIIISEAKFVNIMTE
                     KLNLVVQDFIFKHTAKEDSKIVKYYEEKFKK"
BASE COUNT         7836 a         3109 c         3875 g         7719 t
ORIGIN      
        1 ttttttaaaa ataagctgaa tttcaaaaat aattaagtct tagaaagtta aaattagaac
       61 tttataaaca ctcacagggt aagtgagcga caaagggtta aaaatatgga aaaagaagtt
      121 attgcgtatt tggacaatga gacaataatt gactctcaaa gtgtgaaaaa tacaaattta
      181 aaagaaattt attttgataa ttctaaagaa agtttagaag taatccgtca ttcttgtgcg
      241 catttaatgg cacaggcgat taagagtttg tatcctgaag ctaaattttt cgttggtcct
      301 gttatagaag atggatttta ttatgatttt cgtgtggaaa gtaagattgg cgaagaagat
      361 ttggtaaaaa ttgaaaaaaa gatgaaagaa cttgctgaag caaagattga aatttcaaaa
      421 tatgaaatca caaaaagcga agctttggct aaatttcaaa atgatgattt aaaacaagaa
      481 gttttattgc gtattcctga tagagctgta agtatttata aacaaggtga atttgaagat
      541 ttgtgtcgtg gtcctcatgt gccaaatacg aaatttttac gcttttttaa actcactcgt
      601 gttgcaggag cgtatttggg tggcgatgaa aaaagagaaa tgcttactcg aatttatgga
      661 actgcttttg cagataagga aagtttaaaa gagtatttaa ccattattga agaagctaaa
      721 aaacgcgatc atagaaagct tggaacagag cttaagcttt ttacttttga tgatgagatc
      781 ggaggaggtc ttcctatttg gttgagtaat ggtgcaagac ttagatctaa acttgaacat
      841 atgctttata agatccatcg tttacgtggt tatgagcctg tgcgtgggcc tgaactttta
      901 aaagcagatg catggaaaat cagtgggcat tatgcaaact ataaagaaaa tatgtatttt
      961 acacaaattg atgaacaaga atatggcatt aagcctatga actgtgtggg acatattaaa
     1021 atttatcaaa gtgatgtaag aagttatcgt gatttgcctt tgaaattttt tgaatacggc
     1081 gtggtacatc gtcatgaaaa aagtggcgtt ttgcatggac tttttagagt gagagaattc
     1141 actcaagatg atgcacatat tttttgtatg ccaagtcaga ttaaagagca ggttttagaa
     1201 attttagctt ttgtggataa tttgatgaaa ttatttgatt ttagctatga aatggaaatt
     1261 tcaactaaac ctgaaaaagc cataggtgat gatgaaattt gggaaatagc gactaaggct
     1321 ttaaaagaag ctttagatga acaaggttta aaatacggta ttgatgaagg tggcggggct
     1381 ttttatgggc caaagattga tattaaaatc accgatgctt taaaaagaaa gtggcaatgc
     1441 ggaaccatac aagtagattt taacctgcca agtcgtttta aacttgaata cactgatagt
     1501 gataatgaaa aaaaacaacc tgtaatgttg catcgtgcga ttttaggttc ttttgaaaga
     1561 tttataggaa ttttaaccga gcattgtgcg ggtgagtttc cattttttat cgcaccaact
     1621 gcggtgggta tagtgccaat aggcgaagca catattgctt acgcaaaaga aattcaaaaa
     1681 gaattattag agcttaatat cgatagcgag gtgtatgaaa aaaatgagag cttaagtaaa
     1741 aaaattcgta tcgctgaaaa gcaaaaatta cctatgattt tagttttagg cgatgatgag
     1801 gtggcaaagc gtagcgttgc tttaagagat agaagagcta aagaacaaaa aaatcttagc
     1861 ttggacgaat ttattaaatt agttaaggag aaaatgagtg aggtacactt ttgagtaaag
     1921 aaaaagaagt attgctcaat gaagaaataa gagcggatga aatcagatgt gttggcgatg
     1981 atggcaaagt ttatggtatt atcagtagtg atgaagcttt agaaattgca aatcgtttag
     2041 gacttgatct tgtaatgata gctgcagatg ctaagccacc tgtttgcaag atcatggact
     2101 atggtaaatt ccgttatcaa caagagaaaa aacaaaaaga agcaaagaaa aaacaaaaag
     2161 tgattgatat aaaagaaatc aaactttctg taaaaattgc tcaaaatgat attaattaca
     2221 aggtaaaaca tgctttagaa tttttagaac aaggtaagca tgtgagattt cgtgtgttct
     2281 taaaaggacg tgaaatggca actcctgaag caggtgtagc tttgcttgaa aaaatttgga
     2341 ctatgataga aaatgaagct aatcgtgaca aagagccaaa ttttgaaggt cgttatgtaa
     2401 atatgcttgt aactccaaaa aaagcttaat ccacttttgt ggataaagct tttaaaggtt
     2461 ttaaattttg aaagaaaatc cttctttttt aaaagagcaa attataactt atcttggaaa
     2521 taaaagagca cttttaagtt ttttaaataa tggctttaag gtagctaaaa aagaacttgg
     2581 taaagataaa tttagttttt gtgatatatt tagtggctca ggtgttgtaa gtcgttttgc
     2641 aaaagcacac tcaaattata ttttagccaa tgatttagaa gattattcaa aactcatcaa
     2701 tgagtgttat cttgctaata aagacaaaga tttacttcaa aatataaaaa agtattataa
     2761 aaatttaatc caaaatttag attttcaaaa aggttttatc agtgagcttt atgctccaaa
     2821 agatgatgat gatattaaaa aaaatgaaag ggttttttat acttttaaaa atgctttata
     2881 tcttgatact ataaggcaaa aaatcgaaaa tgaaattcca aaagaattga ggcatttctt
     2941 tatagctcct ttgatttatg aagccagtgt tcattcaaat actagcggag tttttaaagg
     3001 tttttataag ggtaaggatg gcatcggaaa atttggtggc gaaggacaaa atgcacttaa
     3061 acgcattaaa ggagaaatag agcttaaaat gcctattttt tcaaattttt cttgtgaatt
     3121 tgaagtgatg caaaaggatg caaacatgct tgcaaaagaa cttgattttt ttgatgtagt
     3181 gtatcttgac cccccttata atcagcaccc ttatagttct aattatttta tgctaaattt
     3241 aattgcaaat tataaaaaac ctgaagaaat ttctaaaatc agtggcattc caaaggattg
     3301 gaaccgcagt acttttaata agtcaaaatt tgcccaagat gctttatttg aacttattaa
     3361 tgatttaaaa gcaagagtga ttttactttc ttataattgt gaaggttttg taaaaaaaga
     3421 aattttttta aagcgcttaa gcactcttgg aaaatgccgg attttagagc aaaaatataa
     3481 tacttttaga gcttctcgca atcttaaaaa tcgcaatatc catcttcatg agcaacttta
     3541 tattttagtt aaaaattagt ttttcgtgct aaaattgcac ttaaaaatga ggagggattt
     3601 atgaaactaa aattatcttt ttgtacatta atggcatttg gtttttctaa ctatcttttt
     3661 gcttcagcta ttgatccaaa gttattttca agaatatctt gattttgcca gtaataaagg
     3721 caaatttcaa gtaggtcaaa ttggctttta aattttagca aaaaatccta gtcaaaatat
     3781 ctcttttaat gtgcctatga ttgatttttc tacttcaaat cgtggaggaa aattccaagg
     3841 agaatttacc aatataggac aatcttatat agtcagcgct tctcatatga gtacaagttt
     3901 aaatactggg aagtaaataa agactatgtg aaacaaggta gtgttttaca ctttggaggg
     3961 gtagcaaata gaatcgtaag ctcaagtgat aattttactt ataaaaaaga aaatgtggat
     4021 tttgctgttt taaaaatgag taagattagt ctcaataaaa gtgcaaattt gagtaaagat
     4081 ttaaatctta ttgaaaaaat tctggcgatg gtggagatat ttatgaatac aaggatccat
     4141 tttgggatag ttgtcaaagt ggaaaatgtg attattcaaa aggtaaaggc aagctttttg
     4201 atagttcggg ttatgagtac tttgcaagag agggaagtgg tattgtagct ttaggttttg
     4261 aagatacaaa taaagtaccc attaagattt ttgattctaa tgaaatcaat ttaggaggtt
     4321 ttgtcggttt aactcctaaa aatactgaag ataagcgttt taagttgcaa tttcttaatt
     4381 ataccaatga taaaagaaat ccttttacaa gttcttcaat atccggggat tctggaagta
     4441 gagtttatgt ttatgataag atggataaaa aatggtattt agtaggtgta gtaagtacga
     4501 gtaattgtaa tgtccatttt actatggata tacttgtttg caggttgatt atgctttgat
     4561 caatcaagca aagatcaatg aattttaaaa tgctcataaa gtagtcatag gatctggaac
     4621 ttatacactt agtagcgatg gtttgatgaa agatggtaaa aaaatagaaa atgtaagttt
     4681 gatttctaag actaatgtgg gttatgtaag ctataaaaat tcttttgatg ataaaataat
     4741 tgtgataaga gaattgaaga aatgcaaaat agcaaggatt tgtatttttc tcaaaatgga
     4801 agtataaatt taaatagcga tgtggattta ggcgctagtg ttttaaattt gataaaaatt
     4861 caaattggca aataacaggc gataaatggc ttatacatgg cggaatttat gctgataagg
     4921 gttcaaggta gaatataatg ttaaaaccaa aaaagatgat tttctttaat aaaatgggtg
     4981 aaggagagct tgttgtcaaa agtcaaagtg tggatacagg acttagaatg ggtgaggacc
     5041 aaggtaagtc ttgagggtga aggtttaagt tttagcgaaa tttatatgaa tggcagaact
     5101 ttggatttat caggcttaac attaaatttt gatcaaatta aaactgactc taataatgtt
     5161 tttatcacaa gttcttaatc aggaatacat ttaaatttag aaaacaagca agattatctt
     5221 tatcatggca atatcttttc agatgaagct gtaacaatga gtgccaatac agacaaagct
     5281 ttgatttttg atggtaatat ttacaataaa gaaggtgttt ttaggacaga aaatgccaag
     5341 ttaaattttc aaggacatgc tagaatacac gcttatgtaa gcaaagaaca agctaaaaaa
     5401 cttcaagaac atggtttaag tgctttaact aagcctgtaa gttttacaca agaagattgg
     5461 gaagataggg tttttgtttt aaaagagctt aatttagaaa aaaagcgagt tttatttagg
     5521 gcgtaatgta agcttaaaag tagaaaacct taatgctaaa aattccaaaa tagagcttgg
     5581 aagtaaaaat ttgtggatcg atgaaaaaga tggggaaaat attattgata agactgatga
     5641 ttattcttat ggagatgttg tataaacagg agttggcaaa gaaatggctt ttgagcaaaa
     5701 gctttaaaat acccaaaatg ctaagataga aaaggtttat tttagtgtaa atttaaatct
     5761 tgatcattct gatgttactt tgcaaaacac attttttagt ggtaatatca aaggtatcaa
     5821 tgatacgcaa aaaaaatctt gcgattaaag attctttgct tgagtctcat atataaatga
     5881 gcaatcttca agtagaaaaa agtgctattt ataggaaagt tgatgcaaaa aaattaagtg
     5941 caaataatac aatatttaaa atcaatgcgg attttgaaaa ttctaaatca gattatatta
     6001 attctaagga aagcacacaa ggagtaaata atactttagt attaattttt cttaataatc
     6061 ctagtaaaaa gcgggtttaa atatcttact agctcattta aaagatgaaa ataaacattt
     6121 aacaaaggaa ttttttacta tgccaaatgt gagcaaggtt ttagtacgta taccccaaat
     6181 gttgtttttt ctcataatga ggaaaatttt gcccagagtg gaatttagaa aaaattgatt
     6241 ctaagattaa agatgaatat ttttttacta atgataatac tcaagctatt gtaaaaacta
     6301 aatctatact tgctcaagct attttaggct ccatgatagg agtggaataa tatgcataaa
     6361 agaatggggg aattacgcaa taatccttat gaaagtggtg tatggttaag aacttttgga
     6421 tggggtacga gtgatgagta taatagtgga aaatactttg aaattcaaag cggacatgat
     6481 aaattaaacg agtattcgaa tttcgagctt tacagtggag taaggttttt atagtgattt
     6541 tgttttagat atatttatta tcaaaatgaa ataaatgcaa attttattcc aggaaatcaa
     6601 ggtagattag atgataatga tggttcgcat aatattatct taagtgctga gttaggttat
     6661 agaaaagctt atgataaatt ttatcttgag ccgatttgga atttatcagt ggttatgtag
     6721 gagctatgga tctaaaagga gatattgcta gtttaaaacg attttcttat attcctttag
     6781 tcgtaaaaac agcatttttc ataggaagtc aaaattaaaa tttaaatttt agaacaggac
     6841 ttggtttgta tgcggatccg attaaagcag gagatcaaat tttagaggat caagcaagtc
     6901 agagaagata tgaaggaaaa aagatcaaag aatgtttata aatttaggaa atgattataa
     6961 gcttaacgat aaaacacgct ttaattttga atttgaaaag acattttttg gcgatttaaa
     7021 tgtagattgg agtgcaaatg ctaatttaag atatagtttt taaataaaaa ataatttaaa
     7081 aattgtattt ttattttaag cttttttgtt tataatactt gcttttacat ttaaaggata
     7141 aagatgaaaa taaaagttgg gattttagga gcgagtggtt atgcgggaaa tgaacttgtt
     7201 cgcattttgc ttaatcatcc caaggttgaa atttcttatt tgggttcgag ttctagcgtg
     7261 gggcaaaatt atcaagatct ttatcctaac acccctttaa atttatgttt tgaaaataaa
     7321 aatttagatg aacttgaact tgatcttttg tttttggcta ctccgcataa atttagtgct
     7381 aaacttttaa atgagaattt attaaaaaag atgaaaatca ttgatttaag tgcggatttt
     7441 cgtcttaaaa atcctaaaga ttatgagctt tggtataaat tcactcatcc taatcaagag
     7501 cttttgcaaa atgcggttta tggactttgt gagctttata aagaagagat aaaaaaagca
     7561 agtttagtgg caaatccagg ttgttatacc acttgttcta tcttaagtct ttatccgctt
     7621 tttaaagaaa agatcattga ttttagctca gttattattg atgcaaaaag tggagtaagt
     7681 ggagcaggaa gaagtgcaaa ggtggaaaat cttttttgtg aagttaatga aaatatcaaa
     7741 gcttataatt tagctttgca tcgccatact cctgaaattg aagagcattt aagctatgcg
     7801 gccaaagaga aaatcactct acaatttacc cctcatcttg tgcctatgca aagaggaatt
     7861 ttaatcagtg cttatgcaaa tttaaaagag gacttgcaag aacaagatat acgcgatatt
     7921 tatacaaaat actatcaaaa caataaattc ataaggcttt taccgccgca gtcgcttccg
     7981 cagactcggt gggttaaatc aagcaatttt gcggatataa attttagtgt agatcaacgc
     8041 acaaagcgtg ttattgtgct tggtgctatt gataatttaa tcaaaggtgc agcaggacaa
     8101 gctgttcaaa atatgaattt aatgtttgat tttgatgaag atgaaggact taaattcttt
     8161 gcaaatttgt aaaggataaa aatgttaata cgagctatgc aaaaaagcga ttatgaagcc
     8221 gtttataagc tttggtgtga gataaaaggc tttgggataa gaagcattga tgatagcaaa
     8281 gaaaatatag aaaatttttt agatagaaac ccaaatctta gcgttgtagc agtgattgat
     8341 gaagaaattg taggaagtat actttgcggg catgatggac gcacaggagg attttatcat
     8401 gtatgtgtac ataaagatca tagaaaaaag ggcatagcgc acgagatggc aaaattttgt
     8461 cttgaggctt taaaagctca aaagattaat aaaatcgcct taatcgcttt taaaaacaat
     8521 gatttaggca atgagttttg gaaacattat ggttttactt taagagagga tgcgaattat
     8581 tacgatcttt ctttaaatga gtataatcaa actagcttta atgcttaagg aatgatcatg
     8641 caaaaatatt tagaaaaagc taatgtctta atcgaagctt tgccttatat acgcaaattt
     8701 aattctaaga ttatacttat aaaatacggc ggatcagcta tggaaaatga agagctaaag
     8761 cattgtgtga tgcaagatat agctctttta aaactcgtgg gtttaaagcc tattattgta
     8821 catggtgggg gaaaagatat ttctgctatg tgtgaaaaat taggcgtaaa gagtgagttt
     8881 aaaaacggtc ttagggttag tgataaagcc actattgaag tagccagcat ggttttaaat
     8941 catatcaata aaaatttagt ccatagtttg caaaatttag gagttaaagc catagggctt
     9001 tgtggtaaag atggcgcgct tttagaatgt gtgaaaaaag atgaaaattt agcttttgtt
     9061 ggcacgatac aaaaggtaaa ttcgaaaatt ttagaagagc ttttggaaaa agatttttta
     9121 cctatcattg ctcctattgg catggatgag aattttaata cttataatat caacgctgat
     9181 gacgcagctt gtgcgatcgc taaggcttta agggctgaaa aacttgcttt tttaactgat
     9241 actgcagggc tttatgagga ttttaatgat aaaaattctt taatttctaa aatcagcctt
     9301 gaacaggcta aaattttagc tcctaaaata gaaggtggta tgcatgtaaa attaaaatct
     9361 tgcattgatg cttgtgaaaa tggagtcaaa aaggtacata ttttagatgg gcgtgtgaaa
     9421 cattctttgt tgcttgagtt ttttaccgat gaaggtatag gcactttggt gggttaaagg
     9481 atgaaaatgg attataaaga acaaagtcat attatcccta cctataagcg ttttgatata
     9541 gttttagaaa aagggcaggg ggtttatctt tttgacgata aggctaaaaa atatcttgat
     9601 ttttcaagtg gcataggtgt ttgtgcttta ggatataatc atgctaaatt taatgctaaa
     9661 atcaaagcgc aagtggataa gcttttgcat actagcaatt tatattataa tgaaaatata
     9721 gctgctgcag ctaaaaattt agccaaagct agtgctttag agcgtgtttt ttttacaaat
     9781 tctggtacag aaagtataga aggagcgatg aaaacagcta gaaaatacgc ctttaacaaa
     9841 ggtgttaagg gtggacaatt tatcgctttt aagcattctt ttcatgggcg tactttaggg
     9901 gctttatcgc ttactgctaa tgaaaaatat caaaagcctt ttaaaccttt aatttcaggg
     9961 gttaaatttg caaaatataa tgatatttca agcgttgaaa aactggtgaa tgaaaaaact
    10021 tgtgccatta tcttagaaag cgtgcaagga gaaggtggaa taaatcctgc aaataaagat
    10081 ttttacaaag ccttaagaaa gctttgcgat gaaaaagata tattattaat cgctgatgaa
    10141 attcaatgtg gcatgggtag aagtggaaaa ttttttgcct atgagcacgc acaaattttg
    10201 cctgatatca tgacttcagc taaggcctta ggttgtgggc ttagtgtggg tgcttttgta
    10261 ataaatcaaa aggtagcaag caattcttta gaagcaggcg atcatggtag tacttatggt
    10321 ggaaatcctt tagtttgtgc aggagtgaat gcggtttttg aaatttttaa agaagaaaaa
    10381 attttagaaa atgtcaataa actcacgcct tatttagagc aaagtttaga tgagttgata
    10441 aatgaatttg atttttgtaa aaaacgtaaa ggcttagggt ttatgcaagg gctgagtctt
    10501 gataaaagtg taaaagtagc taaggtcatt caaaaatgtc aagaaaatgc acttttatta
    10561 ataagttgcg gggagaatga tttgagattt ttacctcctt tgattttaca aaaagaacat
    10621 attgatgaaa tgagtgaaaa gttaagaaag gctctaaaga gtttttaata aattttgtaa
    10681 aaaaatttat tcttttccat ctactatagg cacaaataaa cattcttcta aaatttcttt
    10741 ttgtaaattt gtgccatttt ttctaaggcg tgtgatgaat tgtttgccat tgtgtaaaat
    10801 aggagcgact aaaataccgt catcgcttaa ttgatcaagt aaaatttcag gaatttgtgt
    10861 cgcataagca gaaaataaaa tcctatcata aggagcataa tttttccagc cattttgtcc
    10921 atcatcaaat tttacattga tattaaaaag ttctaattct ctgaaagttt gagcggcttt
    10981 tttggctaaa ttttctatgc gttctatggt aaaaacacgc cttatgactt tgcttaaaat
    11041 cgcagcttga tagccacttc cacaacctat ctctaaaata ctatcagcat ttttaaaatc
    11101 taaagccata gtcattttag ctacagttaa aggtgaacta atccattgag aatttgctaa
    11161 aggcaaagca tcaaggcgat aagcatgggc ttttaaagga gaaaaaattt cacgtggaat
    11221 ttgacaaaaa gcattaaaaa gttcttcatt gataaaaact ttttgtgcaa tttcttcagc
    11281 catattttga catctttttt gttcaaatgc gttcattact tctcctataa atttaaataa
    11341 aaattgtaac taaaaaagtt gaaatagagt taaacttagc tatacttaaa taaaaaggaa
    11401 aaaaatgctt ataaaattta aaaatcatag tcccaaacta ggtcaaaatg tttttgttgc
    11461 agagggcgct aaaatcatag gagaaataga aataggagat gaaagtagta tttggtttaa
    11521 ttgtgtttta agagccgatg ttaattttat aaaaattggc aaaagaacca atattcaaga
    11581 tcttagcaca gttcatgttt ggcataggga atttgatgaa aaaggaaagt taaaagatgc
    11641 tggttttcct acaataatag gagatgatgt aactatagga cataattgcg ttatccatgc
    11701 ttgtgtgata aaaaatcgtg ttttaatcgg aatgaatgct gttatcatgg ataatgcttt
    11761 gatagaagaa gatagcatag tgggtgctgg aagcgttgta acaaagggta aaaaatttcc
    11821 gccacgctct ttgatacttg gaaatcctgc aaaatttgtg cgtgaattaa acgatgaaga
    11881 agtcagcttt ctaaaacaat ccgctttaaa ttatgtggat tttaaaaacg agtttttaaa
    11941 agatcttcag tgatattttg aagtttaggc gagagtttta cttcaaattt cacaaaacga
    12001 tcaagatcta aaaaactctc atcgagtttt gaaatttgct cttttgtata atcttgaata
    12061 gtatttaaag atgacttttt aagaagtctt ttttctttgt agactaattc taaaagttct
    12121 ttgcgttcta aattttcatc ttgatttggg ttttcgtcaa aaacataaag ttcatcaaaa
    12181 aggatttttt gcgtgttttt atcataaact ctaaaaagct ttttaaaatg aggtagggtt
    12241 gatttttcgt tattttcgct gattttgatt ttaggtttta tgccttgatc ttctaaggct
    12301 gcgagtttat aaacgcaact aaaaataggg tcacttgaag cagtgatcaa tctttcacct
    12361 acaccaaaga tatcaatagg tgcattttgt tctttgagtt ttttaatgct ccattcatca
    12421 agtgcgttag aaactatgat tttacatttt tgaagtcctg cttgatcaag ctcttgtctg
    12481 attttcaaac tcaactcaag taaatttcca gaatctattc tcacgccgcc ttcttgaata
    12541 ccaaattctt taaaaacttt aatcgcattt ttaagtccgc tatttagaca atcataagta
    12601 tcaatcaaaa aaacaggatt ttttggataa attttcacat aagctttaaa agcttcaagt
    12661 tcattttcaa acatttgcac ccaagaatgt gccatagttc cattgatagg gatattataa
    12721 atttttcctg ctaaagtaca agcacttcct atgcaacctc ctataaaagc tgctcttgct
    12781 ccttttaagg ctgcttcact tccttgtgct ctgcgtgaac caaattctaa aattttactg
    12841 tctttagctg cacgcacgat acgattggtt ttggtagcaa taaggctttg gtggtttaaa
    12901 cttaaaagta aaaaagtttc taaaagctgt gcttctatgg ttgtagcttt aatacatagc
    12961 aaaggttcgt ttggaaaaat cacttctcct tcacgcatag cataaatttc acccttaaat
    13021 ttaaagttag ctaaaaaatc taaaaattct gtatcaaaaa taccttgttt tcttaaaaat
    13081 tctatatctt ctgcatcaaa actcaaattt tcaacaaagt ctaaaatatc ttcaagacct
    13141 gcaaaaatag caaaagatcc tgaatctgga atttttctaa aaaatatatc aaaataacaa
    13201 atttgatctt ttttattgtt tttgaaatag ccttgagaca ttgtaaattc ataaaaatca
    13261 caaagcaagg ctaaagaagt tttagaagtc atcaaagctt atactaccct tagaataatt
    13321 cgttacttta ctttcaaaga aattgctctt ttgatcgtta aattttgaaa aatcatctac
    13381 ccatttaata ggatgttttg cattatataa cttatctaaa ttgatcgcac ttaatctttg
    13441 atctacaaga taatggatat attcttctat gatatcatca gtaaagccca tgatttgatt
    13501 ttgagtgatg tatttacccc atttgatctc aagatctcca gcttttttaa acatatcata
    13561 aattttattg atattttcat catggaataa atcaggtctt tctttgcgta ctgaattgat
    13621 catattttga aataataaaa gatgtgtgat ttcatctctt tggataaagc ggatcatttg
    13681 tgctgaacct agcatttttc ctgcacgtgc aagtgcgtaa atggcagtaa aaccactata
    13741 aaaatatact ccttctaaaa tttgatttgc caccatagcc aaaagaagtt tattatcatc
    13801 tacatcgcct gctaattctt cataaatact tgaaataaag tcattttttt cacgcaaagt
    13861 ttcatcatgc ttttccattt cataaatcaa atctgtatta tcgcaaatcg cttctaccat
    13921 aacagcgtaa gattttgaat ggtttgcctc ttcataagct tggcgtgcca aaaccgcatt
    13981 gatttcagga gctgtgatgt aagggttgat attatctgct aaattattgg tttggaaact
    14041 atccatagaa ataagctgac tccaaaccaa atcatacatt cttttttcac ctgcagttaa
    14101 attacagcga taatcaagtg catctttagt tgtatccact tcttttggaa accaagtatt
    14161 tgcctccatt aaatcccaaa gttttaaagc ccaagtatat tttgccttag tgaaatttaa
    14221 aattccatgt gggttgccat caaaaacttt acgatctcct agggtttcgt ttgaacttgg
    14281 attgtaaatt ctttttcttt gcatttttaa cctttcttta tgctttagta gctatacaac
    14341 tttgagttaa aatatcgtgt aaatttaaac gatcttttct tacaaaactg acaaataaac
    14401 caaagagtaa gccaaaactt ataataaata tcacatatct tagtaaaatt ctaagaaaac
    14461 ttagtttctt tcccgttttt atatcaataa gatataaatc atatgcttta agacctgggc
    14521 tttgtgcctt ttttgttaaa aaaatagctt gaatcaaacc aaataaaaaa gtacataaag
    14581 ttgtgataaa atggttgttt aaaaaagctt ctttagagcc taataaaaaa taaaataaat
    14641 acaaaatagg aacataaata agaaaaatat ctataagcaa agctctaaat cttagccatc
    14701 tagagctaat ttttgcttta gttttcattt aatttccacg gcttcctggt tttatagctt
    14761 tattcccttt tttacaaagt ggacaatttg tttcatcgta aatttcaaat tcaaaatttc
    14821 ctagagtaaa gagtggtaaa ttttcaggta atttcgcatt atcttttctt ggagatttta
    14881 aattttctac tgcacaaaaa ccacgatttg ccaatgctgc aaaacctaca acaataccac
    14941 ctaaactttc aatgattttt gcactctcta aagcactacc acctgtagta atgatatctt
    15001 cacaaattat aaatttttca ccctttttta cttcaaaacc acgtcttaaa gtcatttctt
    15061 tatttactct ttcagtgaag ataaaacgtt tactacaagc tcttgcaagc tcataacctg
    15121 ctaaaattcc acctaaagca ggagagcaaa tgctatcaaa ttctatctta tagcttgcaa
    15181 taatctttgc aagttcatca caaagttttg ctgctaattt tggatcctct aaaacttttg
    15241 cactttgaag ataaaactgc gaatgcttac ctgaacttag taaaaaatgc ccttctaaat
    15301 aagcaccaca atctttataa atttgctcta aattcatcgt taaaccttta aaagttcact
    15361 ttctttgctt tttacaccct catcaatttt tgttgtatag gtgtcggtaa gtttttgcac
    15421 ttcatcataa gctttttttg cttcatcttc gcttattgcc ttatcttttt ctagtttttt
    15481 aactgcatcg ttggcatctt tgcgtatatt tcttatagaa acttttgcct tttcacccat
    15541 agctttagct tgttttacgt tttcttctct ttgctctcta gtcatcggag ggaaaaataa
    15601 ttttacactt tcgccgtcat tgtttggatt gacaccgata tttgcagctg caatagcgct
    15661 ttctatggtt tttagtaaag gtttttccca aggagtgatg ctaatagttg aagcatcact
    15721 tgctaaaaca gttgctactt gatttaaagg agtttgagtt ccataataat ccactgtaat
    15781 atgatctaaa atatggatat taacttttcc agttcttaaa gtggtaaagt ctttttttaa
    15841 ggcttctaaa gatttttcac tttgggtttt ttgtttgtta aaaatttcat ttagcattat
    15901 catttccttt aattatttac ttgaattaac atcgcttgga agttgtggtg cacttggagc
    15961 gatagaattt gtgtttgggg tagtaggcac aataggagca cttggaatag tagtgttgtt
    16021 gttttctact ttaattttct ctgctagaga gtccttgcta gctttattgt ataaataacc
    16081 aagaccaata gtatttgcaa taagtaaaat tcccatgaca aaggtaaatt ttgccaaaaa
    16141 tccagccggt cctttggcgc caaataaact ttcattgctt ccactataag ctccaagtcc
    16201 tatacttgaa cttttttgaa gtaaaactgc tatacaaata actacaacga tgataaattg
    16261 taaaatgatt aaaagagtga tcattgaaat ttcctaaaag ttaattttta aatgattatt
    16321 ttagctaaat aaaacttgaa aagttttgaa acttgaaaag tttttgtgag aaaaatccca
    16381 caaaaactta tctgctattg aagcttctta agatattaag taaagatacg aaaagattaa
    16441 caaaatcaag ataaagtgct actgcacctt cgattggagt ttcataattt ccgcggataa
    16501 tattttgcgt atcataaaga atgtaaaatg aaaataatat tgcagctact gctgaaatag
    16561 ctagattaac tatactgctt tggaagaaaa ggtttagtaa agatgctgct acaataacga
    16621 ttaatactat aaataaagct ttacccataa cagtaaaatc tttttttgta ttcatagcaa
    16681 atacactaag tcctgcaaaa gcaactgttg ttaaagcaaa agcttgagcg atgataattc
    16741 ctccagctgg tagagctaaa actgaaataa gtaaaggtgt aagcgttaaa cctgagcaga
    16801 aagtaaaacc aaaaagtaaa acaagattta atggagcttc tctttttttc cattgcaaag
    16861 caaataaaag tccgatttca acagcaaaaa ggatccaaaa agttacttgt gattgtataa
    16921 aaaatgatgc taaagcaaaa attcctacat acgcacctac tgttgcagct aataatgaag
    16981 cagcaaaaag ttgataagtt tgtttaataa aaatacttaa ttcgcttgag cgtgtatttt
    17041 caaattcttt tgatcttgag tagtctctat cataaagact cataaaattc tccttgcaaa
    17101 attgttagat tttttaaaat cttgagcgaa atctaacata ttagactaaa taaaaagtta
    17161 atttatataa tatcttatgc ttaaatgaaa tctttgctga aattttgtta taatttcaag
    17221 attttagttt caggttggtt ttatggaaaa tcttattagc ggtgcgatta agtttatgca
    17281 agaagacttt aaggagcatg aagaactttt tgaaagtcta aaaaataagc aaaatcccca
    17341 tactcttttt ataggttgtt ctgattctag agtaattcca aatttgatca ctaatacggg
    17401 tccaggtgag ctttttgtaa tacgaaatat tgcaaatata gttccacctt atcgcgttgg
    17461 agaagattac ttggcgacaa cttcagcaat agagtatgct ttaaattcat tgcatattaa
    17521 aaatatcgtc gtttgtggcc atagtaattg tggaggttgc aatgctcttt attattctga
    17581 tgaagagtta aataaaattc ctaacgtgaa aaaatggctt actatgttag atccgataaa
    17641 aaaagatgtg atgatttttg caagagacga tttggctatg cgttcatggc ttacagaaaa
    17701 attaaattta gtaaattctt tgcaaaatat acttacttat ccaggcgtgc aagaagcttt
    17761 agatgaagga aaaatagaag tacatgcttg gtattatatt atagagacag gtgaaattta
    17821 tgagtatgat tttaaagcaa aaatttttac tttaatacag gataggaaag ttcaatgaaa
    17881 aaaattattt ttagtttatg tttttttatt ttacaccttg gagcacaaga atttaaattt
    17941 attgatgcga atattagtaa agaagatgaa ggaatttatg ctttagttga aaaatatgtt
    18001 gatcttaaca atcaaattaa agaatttaag aaaaacaatg atgaaaattc aagcactttt
    18061 aatggtattt taagtgaatt tgaaaaagac aaaaagacta ttttagcaaa aatacccgat
    18121 atgatagtag gacaaaagat taatgaagag gcagtggcta gatttttaaa agcaaaagaa
    18181 aaattactag atgttcaaaa aaagaatatt aataagcctt acatttatac agatgccact
    18241 cttaatctag tttattttaa cattgtggaa agtttttatt cttctttgtt tgaagtggaa
    18301 aaacttttta aaaatacagc aagcagtgaa gatttgattg ctactgttga taaggcaatg
    18361 gaaaatttac aaaattcttc taatgttaat ttagatagtt ttaaaagcaa aattacaaat
    18421 ccagaagaat tagaaaaaat taccctaaaa gaaagatata tcagtaatgc cgtagattct
    18481 tattctgaaa ttcttaagta tttacgttca aatgcagatt tgcttgaaag taattatatt
    18541 ttttcattac tcgagcttca agtttggata gatcgtataa atgaggcaat tggggtaagt
    18601 tttgttaata tcggaaaaat agtaatttct gctttggttt tagtattttt tatatcttta
    18661 agacgttttt ttgcaaatat agtatatttt ttccttgttc agctttttta tagaaataaa
    18721 aatgatgtag atgatattaa agtcattttt attgagaata ttaaaaaacc cgtaggtttc
    18781 ttgttgattg tctatgctat ttctctttgt cttactatag caacttatcc tgcacctttg
    18841 agtgtaaatt taagtaattt ttttcatata gtttatgcag ttttaattgc atggcttatt
    18901 ttaagaatgc ttgatggtta tggcgtggta ttggtttcta aacttgctca aaaaagtgga
    18961 aaaaaagaag ttgtaaattt aattattaaa attttatatt ttgtcattat tatcatagct
    19021 ttattatata ttcttgctca acttggtttt aatatttcgg ctattattgc atctttggga
    19081 attggtggtt tagctgttgc tttagcggcg aaagatatca ttgcaaattt ctttgcttct
    19141 atactcttac tttttgataa tagctttaat caaggagatt gggtagaggt ttcaggcata
    19201 gaaggaactg tggttgaaac aggacttaga aaaactacta ttagaacttt tgataattgt
    19261 cttgtatttt taccaaattc aactattatg ggagctaata tcaaaaattg gagcaaaaga
    19321 cgcatgggtc gccatgttag aatgtatttg ggtgttggtt atgatgctac tcctgaaaaa
    19381 ctagaacaat gtgtaaaaga tctaagagaa tttttgcata caagtgattt agtagctcac
    19441 gatgaggata gcgcattaaa atatggcgat catacaacaa aatatcgtca aaatcttgta
    19501 tctattaatg atttagaagg ctataaaaat gcttgttatg tggctttaag tgaatttgca
    19561 gatagtagta ttaatataga gctttatttt tatatcaaag aaataggtgg aaaagatttt
    19621 agagaagcta gacaaagttt aatgcttgag tttatgcgta taattgaaaa aaatggttta
    19681 acctttgctt tcccaagtcg tagtatttat atagaaaatt taccacccct tgatttgcaa
    19741 gcaaaagcta taaaatagca agattttatc ttgctatttt ttaaaccggc ataacgcgta
    19801 tatttggact taattcttct tgtaaaattg tttcaatagc ataaagtgtt gcaccacttc
    19861 cactagaaca accactacaa gcaccaagat aacgaatata aacatcaatt gctgcacctt
    19921 cagccttttg tatatcaatc acttccaaat ctccgccatc attatgaagc atagggcgaa
    19981 tttcagcatc taaaacactt tcaactgctt ttaattgtcc cactacggtc atttcatcaa
    20041 aagctacatc acttttcatt gtatttttga gtttttctct atctatttca gctctagttt
    20101 cagctaaaat atctacaagg taataatctc ttttttcatg tccgcctggt ttgatacagg
    20161 atttacaaaa agcacccgct ttagtgtatt gtgtgatttc ttctacgcta tgcaaatcat
    20221 taagtttaat cacttcttta atagttccaa gacttaccct agcgcattcg caaactataa
    20281 tttgatcttc aaaatcttca ggacttatac ctttataatg cgctgctgct tgtttgatta
    20341 catcataagc cataaccgaa cagtgcattt tttgaggtgg aacagctgga gtttctggat
    20401 tatcacgcat agcaaattcc acatctaaat ttgtgatttt tactgcttca tctacagttt
    20461 ttcctataca aagatccacc atagtatcac tacttgctat agctgtacca caaccaaaac
    20521 ttttaaattt tgcatcgata attttatcag ttttttcatc tacaagccaa aaaagtctta
    20581 ctgcatcgcc acaactttct gcaccaaaat cagctacgat caattttgca ttgcgtgctt
    20641 tagcatcttc ttcactaaat tctcccatat gttgaggatt attcattcta tcttgaactt
    20701 tttgtgaata ctcatcccaa atggatccac caattaaact attttttccc atttttcatc
    20761 cttatttgta attatttgga ttataagcat aagtacaaga aattgctctt aatctctgtg
    20821 ttgcattttt aatttgtttt gctgcataat caatttcttc ttcagtgtta aaacgtgaca
    20881 aagaaagcct taaagctgta tgcgctaaat catgctccgc accgatagct tccataatag
    20941 gattgctttc taaagcttca cttgcacagg ctgagcccgt acttgcagct ataccatttt
    21001 tatttaaatc ccaaagcatt gcttcgcctt caacaccttt aatacttgct aagattgtat
    21061 taggcacacg gtgttccctt tttccaacca ctgttgtatc gggcaaggcc aaaatttgat
    21121 cttctagttt atctcttaaa cggcgtatat gagaatcttc aaaatcaagc atagtatttg
    21181 caatacgcaa agcctcgccc atagccacta tgtaaggcac atttaaagtt ccgcttctac
    21241 gaccacccat gtgttctcca ccgtgtaaaa gtggagtaag tttaagtcct ttttttataa
    21301 aaagtccacc cacacccttt ggtccatgaa atttatgtgc cgaaaatgaa gcaaaatcaa
    21361 ctcctacttg agttaaatta acctttattt tacctactgc ttgagtagca tctgtatgaa
    21421 aaagagcacc aaattcatgc gcaagttctg ccatcgcttt aatatcaaaa atcatacctg
    21481 tttcattatt tgcccacata acacttacaa gtgctgtttt atcgctaatc actttacgca
    21541 aatcttctac agtagaaacc ccttcttcgt ttacaggaag ttctataact tttactccaa
    21601 gactttttaa aaaataagca gcagcagtaa cagcagggtg ttctacacta gaaataatca
    21661 cttcattgcg ttctttatct aaaatatgat caaaatacac acccttaagc acccagttaa
    21721 tgctttctgt cgcacaggag gttacaacta tgtcatctag gtcatttgct ccaagtcctg
    21781 cataaagttt atccaaagct tctcttaagg caggatgtgt tgcgctacca tattgatgaa
    21841 ggctatttgg atttccatac atatccttta aaaaaggtag catcaactca taagcattag
    21901 gatcaagcat tgtcgttgcg ttgttatcta aatatacttt cactttaaaa tccttaattt
    21961 atccttaatt ttaattagga tattttttat ctttatttaa aaacggataa taacaaaaat
    22021 ttataaaaat taggttaaaa attataacaa aaataaaatg ctaaagtaaa attttaaagt
    22081 gaaatatttt gtgaatttta tatagcaaaa atgagaaata ctatttctta aatttttctt
    22141 cgtaatactt tactattttt gaatcttctt tggctgtatg tttaaagata aaatcttgaa
    22201 caacgagatt taatttttcg gtcattatat ttacaaattt agcttcactg atgataattt
    22261 cttcaatttc taagataatt tttctgtgaa ttcttgtatg atggttgata taaggatatt
    22321 ctatttctct cataaaggct tcttcatctg aaaaatgtct attgatcatt attaacaact
    22381 ctcttaagac aatttttaat tcttttgttc caacatgacg ttggttcatt aaagagagtt
    22441 ttttagaaat ttcaaaaagt tctttatgtt gatgatctaa aagatcatta ttcattgaaa
    22501 taattttttc attataagtc atggttttga gtactttta
//
LOCUS       DAPIVO010000024        22296 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.024, whole genome shotgun sequence.
ACCESSION   DAPIVO010000024 DAPIVO010000000
VERSION     DAPIVO010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22296)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22296)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22296
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.024"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(22..591)
                     /gene="efp"
                     /locus_tag="RJ239_000832"
     CDS             complement(22..591)
                     /gene="efp"
                     /locus_tag="RJ239_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HDV7330962.1"
                     /translation="MASYSMGDLKKGLKIEIDGIPFKIVEYQHVKPGKGPAFVRIKIK
                     SFIDGKVLEKTFHAGDKCEAPNLEDKTMQYLYDDGENCQFMDTQTYEQVAISDDDVGE
                     AKKWMLDGMMVDVLFHNGKAIGVEVPQVVELKIIETAPNFKGDTQGSNKKPATLETGA
                     VVQIPFHVLEGEVIRVDTVRGEYIERANK"
     gene            705..1025
                     /gene="rnpB"
                     /locus_tag="RJ239_000833"
     ncRNA           705..1025
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="RJ239_000833"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(1023..1298)
                     /locus_tag="RJ239_000834"
     CDS             complement(1023..1298)
                     /locus_tag="RJ239_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330963.1"
                     /translation="MKQWLSDFKLALIQEDVNKLENLLDELDMKAFIKNLAKESPSED
                     FLKENANDVFYQVQALLQEAVILIEQKKKTKAVEIQKFQKALTYFKS"
     gene            complement(1279..1665)
                     /gene="fliS"
                     /locus_tag="RJ239_000835"
     CDS             complement(1279..1665)
                     /gene="fliS"
                     /locus_tag="RJ239_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HDV7330964.1"
                     /translation="MQNNLAYNAYSQNQVGIESPQKLIEMLYEGILRFCARAKVAIRN
                     EDIEQRVYFVKRTTAIFIELINTLNYEKGGEVAHYLSGLYTREIQLLSLANLENNEDR
                     INEVINVTKGLLEAWREVHNNETVAQ"
     gene            complement(1677..3608)
                     /gene="fliD"
                     /locus_tag="RJ239_000836"
     CDS             complement(1677..3608)
                     /gene="fliD"
                     /locus_tag="RJ239_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HDV7330965.1"
                     /translation="MAFGSLSSLGFGSGVLTQDTIDKLKEAEQKARIDPYTKKIEENT
                     TKQKDLTEIKTKLLSFQTAVSSLADATVFAKRKVVGSISDNPPASLTVNSGVALQSMN
                     INVTQLAQKDVYQSQGLANDSGFINANLAGTTDLTFFSNGKEYTVTVDKNTTYRDLAD
                     KINEASGGEIVAKIVNTGEKGTPYRLTLTSKETGEDSAISFYAGKKDAQGQYQSDPEA
                     EKIFSNLGWELDKTTQTIDPAKDKKGYGIKDASLHIQTAQNAEFTLDGIKMFRSSNTV
                     TDLGVGMTLTLNKTGEINFDVQQDFEGVTKAMQDLVDAYNDLVTNLNAATDYNSETGT
                     KGTLQGISEVNSIRSSILADLFDSQVVDGTTEDANGNKVNTKVMLSMQDFGLSLNDAG
                     TLSFDSSKFEQKVKEDPDSTESFFSNITKYEDINHTGEVIKTGSLSKYLNSNGGNTNG
                     LEFKPGDFTIVFNNQTYDLSKNSDGTNFKLTGKTEEELLQNLANHINSKGIEGLKVKV
                     ESYNQNNVTGFRLNFSGDGSSDFSIKGDANILKELGLSDVNITSKPIEGKGIFSKLKA
                     TLQEMTGKDGSITKYDESLTNDIKSLNTSKDSTQAMIDTRYDTMANQWLQYESILNKL
                     NQQLNTVTNMINAANNSNN"
     gene            complement(3611..3976)
                     /gene="flaG"
                     /locus_tag="RJ239_000837"
     CDS             complement(3611..3976)
                     /gene="flaG"
                     /locus_tag="RJ239_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella length regulator FlaG"
                     /protein_id="HDV7330966.1"
                     /translation="MEISKANGQMDTALANISQRTSETQASLNIQTDRSQSQGGDDGQ
                     QRGVSEKLADITKKLNEQMDSLDTNVRFGYSDKIGSMYISVTEKSTGREIRQIPSEEA
                     MRLAEYFRDVIGMIFDKES"
     gene            complement(4133..5935)
                     /locus_tag="RJ239_000838"
     CDS             complement(4133..5935)
                     /locus_tag="RJ239_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis decarboxylase"
                     /protein_id="HDV7330967.1"
                     /translation="MKEFIQILKENDLLRVIEEPVDVDLEIAHLAYIEAKKGEKGKAL
                     LFKNPIDKKLNKQYKFPVLMNTFCNKKALNLAFGRDYEEVAEEISKLIKLHIPTSFKA
                     KMDFFMNLLSFKNIPPKRLKKNKALYDYEILNSLEELPILKTWEDDAGKFITMGQVYT
                     QNLDKTQNNLGMYRLQMSDKNELLMHWQIHKDGANFYHEYKNAGFKKMPVSIAIGGDP
                     LYIWCSQAPLPKGIFELLLYGFIKKTPAKITPCENGIFIPYDSDVVIEGYVDLEEFKI
                     EGPFGDHTGFYTPAELFPVMKVEKIYAKKDAIYQATVVGKPPLEDKIMGLGTERIFLP
                     LLQTSVPDLIDYNMPENGVFHNLILAKIDAKYPAHAQQIMHAFWGVGQMSFVKHAIFV
                     DKNAPSLKDYDALIPYMLDRFNTKKILISEGICDQLDHASPNSCFGGKAGLDACEEIQ
                     VEELEILEDEKLLELFKTKVELLNLKQFYKESKSPIVCILLDKKEKIEQSFDKLLEFK
                     KHFRILVFLDAENKLENSYMLVWRVVNNIDAKRDIFIKEERLGVDASAKGEAEGYLRA
                     WPKQTDCTKSVIEDLILRNILENNPDLFNKFEIF"
     gene            complement(5932..6855)
                     /gene="hemC"
                     /locus_tag="RJ239_000839"
     CDS             complement(5932..6855)
                     /gene="hemC"
                     /locus_tag="RJ239_000839"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HDV7330968.1"
                     /translation="MKLIIATRKSQLALWQSEHVAQILKNTHQIEVLLEGFKTKGDVL
                     LDSPLAKIGGKGLFTKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSND
                     AMLSQNYKDFLSLPKGAKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNDF
                     DAIILAMAGIKRLNLDKQVNFVYEFSKDELIPAASQGALGIESINDEKILELLKCLND
                     ENALIETSIEREFIATLEGGCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIK
                     KNDFKGFGESLAKEFIAKGAKELLKKAESMI"
     gene            complement(6852..7241)
                     /locus_tag="RJ239_000840"
     CDS             complement(6852..7241)
                     /locus_tag="RJ239_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HDV7330969.1"
                     /translation="MNYKLSLSPLFVLEIIASVLFIVFFGFGNFLFFILLSMIFGAVL
                     LGIFWKNMLEFQMGGLKDMLTQFSFVIAGFLLIFPGIITSVFGIFVFFFGIALKLITK
                     SKYQYTKQEYQNSNEEIIDVEIIEDRK"
     gene            complement(7238..8947)
                     /locus_tag="RJ239_000841"
     CDS             complement(7238..8947)
                     /locus_tag="RJ239_000841"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HDV7330970.1"
                     /translation="MMRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFL
                     PLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKE
                     NEFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKD
                     GYSFHANEEDLGREFELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNG
                     EDDILICENCDYAANVEAAKRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA
                     FYTIKAVVKKAIYENESKLVVFFIRGSDDLQEVKAQNTCSALELVDASEEELEKAGLV
                     AGFIGFVGLKDIDFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKE
                     GDCCVKCGAKLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSR
                     LLAVAIEANHDEKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYRDLTNLGLEVLL
                     DDRNERFGVKMNDFELMGFPYALVIGKGLENNEIELIQREGLVKELIKTDELMEILKK
                     KVL"
     gene            complement(8931..10229)
                     /locus_tag="RJ239_000842"
     CDS             complement(8931..10229)
                     /locus_tag="RJ239_000842"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HDV7330971.1"
                     /translation="MYYCISFTHKNTDIALREKLSFSNEAKKSEFLKIISTHENIEEC
                     LVISTCNRVEIVAFVKMACAEFIVKSLALLCDVDKDILLEKADIFEDSGAIHHLFSVA
                     SSLDSLVVGETQIAGQLKDAFAFAVKNNFCGVHLSRAVHSAFKCAAKVRNETQISKNS
                     ISVASVAVAKAKELADLTQKKAVVIGAGEMGELAAKHLIAAGAKVIILNRDLQKAKDL
                     CERLGVLSEYDSLENLKKYLNQYEFFFSATNAPNAIITNSLIEELSYKRYFFDIAVPR
                     DIDINENENISVFAVDDLEIVVQKNLALREQEARMAYGIIGRETSEFFRYLNDLALMP
                     IIKAIRLQAKEYADKQLEIALKKGYLKKSDKEEARKLIHQVFKAFLHTPTVNLKHLQG
                     KMQSDTVINAMRYVFDLQNNLEGLNQYKCEFDMENNDEIY"
     gene            complement(10229..11122)
                     /locus_tag="RJ239_000843"
     CDS             complement(10229..11122)
                     /locus_tag="RJ239_000843"
                     /EC_number="2.5.1.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexaprenyl-diphosphate synthase"
                     /protein_id="HDV7330972.1"
                     /translation="MQKIDELIKQFLQELGYEPILNMLSNVKSGKKLRSKLLLAIADE
                     SEIAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAF
                     YELSKMDARFASIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASA
                     RCGAILAGLYEKDFAEYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPY
                     IYLYENLQEQDRIYLQTLFKKDLNENEKEWLKTKFEEQKALEKAILEAKTYAKKASKA
                     IEKYDNNKLNDIIKAMIDREF"
     gene            complement(11136..11672)
                     /locus_tag="RJ239_000844"
     CDS             complement(11136..11672)
                     /locus_tag="RJ239_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exporting protein"
                     /protein_id="HDV7330973.1"
                     /translation="MFKISPCLICIFFIFSNVLASEPTFDYTYKFILKKDERASVQIK
                     EIGYEDKVQNFDFYWTLFDNTNIIVHSKFRKYPRQFVMSLRRNLDWVTQTLIPDYTNP
                     HIDRARLILEFSGYNKGLATFTVYIEDKESRLMVEFLDPRKKALQNPPQNNQVVPMIN
                     FNEPQVKPLTSKENNNSN"
     gene            complement(11675..11938)
                     /locus_tag="RJ239_000845"
     CDS             complement(11675..11938)
                     /locus_tag="RJ239_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2018 family protein"
                     /protein_id="HDV7330974.1"
                     /translation="MDFFDEMFNKTPKEKFIEIIQNGNLGALEKVFEEFFADHIAMVE
                     LLEKQGLTEMDVKNFILENGDFIEERQNDIYIELGAKILGHEG"
     gene            complement(12077..12634)
                     /locus_tag="RJ239_000846"
     CDS             complement(12077..12634)
                     /locus_tag="RJ239_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HDV7330975.1"
                     /translation="MKYQLRFGGEGGQGVITAGEILAEAAIKEGRQAFKASTYTSQVR
                     GGPTKVDIIIDDKEILFPYAVEGEVDFMLSTADKGYKGFRGGVKEGGIIVVEPNLVHP
                     ESEDYKKWQIFEIPIITIAKDEVGNVATQSVVALAIAAYMSKCIDLDVLKETMLHMVP
                     AKTRDANAKAFDLGVKYATQAKPYS"
     gene            complement(12631..13476)
                     /locus_tag="RJ239_000847"
     CDS             complement(12631..13476)
                     /locus_tag="RJ239_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HDV7330976.1"
                     /translation="MAFNYDEYLRVDKMPTQWCWGCGDGVVLKCIIRAIEKLGWNMDD
                     VCLVSGIGCSGRMSSYVNCNTVHTTHGRAIAYATGIKLANPSKHVIVVSGDGDTLAIG
                     GNHTIHGCRRNIDLTHIVINNFIYGLTNSQTSPTTPKGFYTVTAQFGNIDPNFDACEL
                     TKAAGASFVARGNVIEANKLENLIYKALAHKGYSFVDVFSNCHINLGRKNKMGEAVAM
                     LDWIKNRVVDKAKFESMDFEERKDKFPTGILHEDNSQPEYCHAYEEVRRAAKEKRMVD
                     LGALK"
     gene            complement(13477..14601)
                     /locus_tag="RJ239_000848"
     CDS             complement(13477..14601)
                     /locus_tag="RJ239_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate synthase subunit alpha"
                     /protein_id="HDV7330977.1"
                     /translation="MREVIATGNVLIAKAAIDCGCKFFGGYPITPSSEIAHELSHMLP
                     ANDGTFIQMEDEISGISVAIGAAMSGVKSMTASSGPGISLKAEQIGLAFIAEIPLVIV
                     NVMRGGPSTGLPTRVAQGDLFQAKAPTHGDFASIAIAPASLEEAYTETIRAFNLAEKY
                     MTPVFLLMDETVGHMNGKAVLPDLKDIKVYNRKKFEGDKKDYKPYAAGENEPATLNPF
                     FTGYRYHVTGLHHGDIGFPTEDGVIVKKNMERLIGKIKNNQEDICTYEEYMLDDAEFL
                     IIAYGSVSRSAKEAIQRLREQGIKVGLFRPITLYPVAEKKIAEVVSKFKKVMVSELNM
                     GQYLEEIERVTSRRDFISLHRANGRPITPSEIIAKVKENI"
     gene            complement(14610..14921)
                     /locus_tag="RJ239_000849"
     CDS             complement(14610..14921)
                     /locus_tag="RJ239_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HDV7330978.1"
                     /translation="MSMTAPKDTPVWVDEHRCKACNICVSYCPAGVLAMRDDVHAVLG
                     QMIEVVHPESCIGCTECEIHCPDFAIMVAKRDEFKFAKLTAEAKDRAVAVKNNKYKKL
                     A"
     gene            complement(14936..15805)
                     /gene="sucD"
                     /locus_tag="RJ239_000850"
     CDS             complement(14936..15805)
                     /gene="sucD"
                     /locus_tag="RJ239_000850"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HDV7330979.1"
                     /translation="MSILVNKNTKVIVQGFTGKEATFHAEQCMAYGTNIVGGVTPHKG
                     GQTHLGKPVFDTVADAVKATKADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPV
                     KDMMFAKQYANKKGMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYE
                     AANQVVQGGYGISTAVGIGGDPIIGLAYKELLSEFQKDDETKAIVMIGEIGGSLEVEA
                     AKFIKENISKPVVAFIAGATAPKGKRMGHAGAIVGSADESAAAKKEALKSYGIHVVDS
                     PALIGEEIQKILG"
     gene            complement(15815..16978)
                     /gene="sucC"
                     /locus_tag="RJ239_000851"
     CDS             complement(15815..16978)
                     /gene="sucC"
                     /locus_tag="RJ239_000851"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HDV7330980.1"
                     /translation="MNIHEYQAKAIFADNGIPTLKGKVAFSVDEAVANAKELGGSVWA
                     VKAQIHAGGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGA
                     NIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHG
                     LEVARVLGLDKDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSF
                     DDSALYRHPEIAELRDTTEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDII
                     NYSGAKPANFLDVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILE
                     ATKNVEVNIPIVVRLDGTNAAEAKTILDNSNLKNIKAATNLKNGAELVKSLVG"
     gene            complement(16979..17881)
                     /locus_tag="RJ239_000852"
     CDS             complement(16979..17881)
                     /locus_tag="RJ239_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDV7330981.1"
                     /translation="MKITVIGAGNVGSSVAYALILREIANEIVLVDINEDLLYAKELE
                     LTQSIAALNLNIDLLCTKDYTHTKNSDIVLFSAGFARKDGQSREELLQLNTSIMLDCA
                     KKIKDFTEDPLFIILTNPVDFLLNTLYESGIFSSKKIIAMAGVLDNARFKYELAKKLN
                     VKMSRVDTRLIGFHNDDMVLVKSYASVKNKNISEFLNEEEFEDLENEVKTGGAKVIKH
                     LKTSAYLAPASACIRMLESIRSGEFLPMSVILHGEFGVQNKALGVMARLGLEGVIEIM
                     KMDLSLQEKDKLEKSLIKYQYKGE"
     gene            complement(17878..20082)
                     /locus_tag="RJ239_000853"
     CDS             complement(17878..20082)
                     /locus_tag="RJ239_000853"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HDV7330982.1"
                     /translation="MQITYTLTDESPALATYSFLPIVKAFLSRAHIGVKTSDISLSGR
                     ILATFSEYLKEEQRCEDALELLGELVKRSDANLIKTPNISASIPQLKAAIKELQDKGY
                     MLPNYPDEPKNDEELQIKTKYQKVLGSAVNPVLRQGNSDRRSTKAVKDYAKNNPYRVV
                     EFNPNSKTRVSYMKEGDFFSNEKAVLIDQDCVANIEFTSVDGKKEILKEGLKLEKNEI
                     LDATFMDVQKLQEFYTKEIKASKDDDVLFSLHLKATMMKVSDPILFGYAVKVFFKELF
                     IEFQDEFEKLGINPNNGLSELLSKIENSSKKDEILKKYNEILAKSADISMVNSDKGIT
                     NLHVPSDVIVDASMPAMLKNGARLWDKEGKEKDTNAVIPDQTYATIYEAVIEDLHKNG
                     TLNPSKLGSVSNVGLMAKKAQEYGSHDKTFVAKEEGTFKIVSNGKVLLEHKVRKGDIY
                     RANQAKFDAVLNWIDLGIERSELSGAEAIFWLDSKRASNKIMITLVQNRLKEKGKNVA
                     ILTPKEACLRSLELIREGKDVISITGNVLRDYLTDLFPILELGTSAKMLSVVPMLNGG
                     AMFETGAGGSAPKQVEQLVEENHLRWDSLGEFLALQASLEFYANKCGNHKAKVLAECL
                     DEAIGEWLENNKAPSRKVKEDDNRTSHFYLAMYFANHLARQASDMELQSFFKDIALEL
                     SSNEEKIRAEFNDAQGVKVDLGGYYKFDDEKANKIMRPSATFNAILEKIGQR"
     gene            complement(20199..>22296)
                     /locus_tag="RJ239_000854"
     CDS             complement(20199..>22296)
                     /locus_tag="RJ239_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AsmA-like C-terminal domain-containing protein"
                     /protein_id="HDV7330983.1"
                     /translation="LSINTKSEFYYFQGRASGELLDFNASISYKDKNLAYKIEDLNIR
                     NITEIFKRVNKRIELPQSLNLWVAYRAKGEFYHLDYLQGFIDFTKDNYYLDNISASGY
                     VNNVKVRLDDKMNAIEIPKLDLNLNKQKLDFVFNKAFYNGADLSSSKVYLYDLFDEKK
                     VGIYLRIKSDNLKFDEKLAKALEDYHFSLPFYQKSGKIKSDLELKIDFHDKGEISYSG
                     ILALENASISLADFNITKAFVKLNQNDLNIENASVKNGFLEADFNAKFDLQKQQGNFN
                     TQISRLYFDNGELLDLKNQNVEVKLDYSQNVNISIPQWNLILNFKDGLEANLNNPKIL
                     FSFSPLLKKLGFIDAKNVYYKTLNFEDFNASVNDTYFKNNLLINGQTPYENDSFDIVK
                     NKGIMEIHTQSDTASAKISSDNKEIHLKNLSYIYRKHSNSSNSTFDIATNTQNISFGG
                     ANVALILADSNKTLAFDRVEADLKGNALDLKGSRGNAKFDLYYSSNDLNLNVSNIDDN
                     YLNEFLQKQAVQDGVFNLSIKGSGLEYFDGQIDFKNTYVKDLRGINQLISFIDTVPSL
                     LMFKSPTFNQKGLSLHDGKIIFNRKKDLLSVSAINLNGDSVDIYGLGSANLRLNTVDF
                     SLELKTLKSASEAISKVPILNYVILGKNQEISTNLKIDGSIDDPKFHTEILTDTLKTP
                     FNLIKNIIQLPANLLN"
BASE COUNT         7172 a         4367 c         2685 g         8072 t
ORIGIN      
        1 agtccaaaag ctttttttgt attatttgtt cgctctttct atatactcac cacgcacagt
       61 atcaacgcgt ataacttcac cttctaacac atgaaaagga atttgcacta ctgcgcctgt
      121 ttccaatgta gccggttttt tatttgatcc ttgagtatca cccttaaaat ttggagctgt
      181 ttcgatgatt ttgagttcaa caacttgtgg aacttctacg ccgatagctt taccattatg
      241 gaaaagcaca tctaccatca taccatcaag catccatttt ttcgcctcac ctacatcatc
      301 atcactaata gctacttgtt catatgtttg cgtatccata aattggcaat tttcaccatc
      361 atcataaaga tactgcatag ttttatcttc taaatttgga gcttcacatt tatcacctgc
      421 atggaaagtt ttttcaagta ctttaccatc aataaaagat ttgattttaa tacgcacaaa
      481 agcaggacct ttgcctggtt ttacatgctg atactcaact attttaaaag gaattccatc
      541 gatttctatt ttaagtccct tttttaaatc acccattgaa taagatgcca taaatttcct
      601 ttgttaaaaa ataaaaaaca attttatcaa attttgattg atatcacaat aaaattattt
      661 tatttgatga aaaaataagt aaaattacgt taaaatccaa atttaaagca tagtaaatgc
      721 tcgcttcttt ttaggagagg aaagtccgag ctgctaaaga caaacattcc atctaacaga
      781 tggctagggt aacctaaggg atagtgcaac agaaagaaaa ctaccacgca agtggaaaag
      841 gtgaaacggc ggggtaaaag cccaccagcg attttggtaa caatttcggc tatgtaaacc
      901 caatgtgcag caagaaggga tggttagcgt ctttgtttta acccttcgct tgattttgtt
      961 tgcaaaaaca aaactagata aatgagcatt caagacagaa ctcggcttat cgctatgctt
     1021 ttttaagatt taaaatatgt caacgctttt tgaaattttt gaatttcaac agcttttgtt
     1081 tttttctttt gttcaatcag tataacagct tcttgcaaaa gagcttgaac ttgataaaat
     1141 acatcatttg cattttcttt taaaaaatct tctgaaggcg attctttggc taaattttta
     1201 ataaaagctt tcatatcaag ttcatcaagt aaattttcaa gtttattgac atcttcttgg
     1261 attaatgcaa gtttaaaatc actgagccac tgtttcattg ttatgcactt ctctccaagc
     1321 ttctagcaaa cctttggtta catttataac ttcattgatt ctatcttcgt tattttctaa
     1381 atttgccaaa gataaaagtt gaatttctct tgtataaagc ccgcttaaat aatgtgccac
     1441 ttctccgcct ttttcatagt ttaaagtatt aataagctct ataaaaatag ccgtggttct
     1501 ttttacaaaa tacactcttt gttctatatc ttcatttctt atggctactt tagctcttgc
     1561 acaaaaacgc aaaattccct cataaagcat ttcaataagt ttttgcgggg actctatccc
     1621 cacttgattt tgagaataag cattataggc taaattattt tgcatctttt ttatccttaa
     1681 ttattagaat tgtttgccgc attaatcata ttagtcacag tatttagctg ttgattgagt
     1741 ttatttaaaa tactctcata ttgcaaccat tgattcgcca ttgtatcata tcttgtatca
     1801 atcatagcct gagtcgagtc tttagaggta tttaatgatt taatatcatt tgtcaaactc
     1861 tcatcatatt ttgtaattga accatctttt ccagtcatct cttgcaacgt ggcttttaat
     1921 tttgaaaaaa tacctttacc ttctataggc ttagaggtta tatttacgtc agacaaacct
     1981 aattccttga gaatgttagc atctcctttg attgaaaaat ccgagctacc atctccacta
     2041 aaattcaacc taaaccctgt aacattgttt tgattatagg attcaacctt aacttttaag
     2101 ccttcaatac ctttactgtt tatatgatta gctaaatttt gaagcaattc ttcctctgtt
     2161 ttccctgtta atttaaaatt agtaccatca gaatttttag acaaatcata tgtttgatta
     2221 ttaaaaacta tagtaaaatc tcctggttta aattctaaac cattagtatt acctccattg
     2281 gaattaagat atttacttaa acttcctgtc ttaattacct ctcctgtgtg attaatgtct
     2341 tcgtatttag taatatttga aaaaaaactt tcagtagagt ctggatcttc tttaactttt
     2401 tgttcaaatt tagaagaatc aaaactcaaa gtgcctgcat catttaaact taagccaaaa
     2461 tcctgcatag aaagcataac cttagtgttt actttattac catttgcatc ttcagtagtt
     2521 ccatcaacaa cttgagaatc aaacaaatca gcaagaatgc ttgagcgtat tgaatttact
     2581 tcactgatgc cttgtaaagt tccttttgtt ccagtttcac tattatagtc agttgcagca
     2641 ttaagattgg ttactaaatc attataagca tccaccaaat cttgcatggc ttttgtcaca
     2701 ccttcaaaat cttgctgtac atcaaaatta atttcacctg ttttatttaa agttaaagtc
     2761 attcctacac caagatcggt aacagtatta cttgatctaa acatcttaat accatcaagt
     2821 gtgaattctg cattttgcgc agtttggata tgcaaagaag catccttaat accataacct
     2881 tttttatcct tagctggatc aatagtctga gtcgttttat ctaattccca tccaagattt
     2941 gaaaatattt tttctgcctc tggatcactt tgatactgac cctgcgcatc tttttttcca
     3001 gcatagaaac ttatcgcact gtcttcgcct gtttctttac tggttaaagt taagcggtaa
     3061 ggagtgcctt tctctcctgt gtttacaatc ttagcgacaa tctctcctcc actagcttca
     3121 ttaattttat cagctaaatc tctataggtt gtgtttttat ctaccgtaac agtatattct
     3181 ttgccatttg aaaaaaaagt aagatcggtg gttccagcta aatttgcatt aataaaacca
     3241 ctgtcatttg ccaatccttg actttgatat acatcttttt gtgcaagttg agtaacattg
     3301 atattcatgc tttgtaaagc aacacccgaa ttaactgtaa gacttgctgg aggattatcg
     3361 ctaatacttc ctacaacttt tcttttcgca aaaaccgtag catcagctaa tgatgaaaca
     3421 gccgtctgaa aacttagtaa tttagttttg atttctgtta aatctttttg tttggttgta
     3481 ttttcttcaa tttttttagt ataaggatca atacgagctt tttgctctgc ttcttttaat
     3541 ttatctatag tatcttgagt taaaacccca gaaccaaatc ctaaactaga tagactacca
     3601 aatgccattt ttaactctcc ttatcaaata tcattcctat cacatcccta aaatactcag
     3661 ctaatctcat agcttcttcg ctaggaattt gacggatttc ccttccagta cttttttcag
     3721 tcacgctaat atacatagaa ccgattttat cactataacc aaaacgaaca ttggtatcta
     3781 gagaatccat ttgctcattt aacttttttg taatatcagc taacttttca ctcacacctc
     3841 gttgctgtcc atcatcgcct ccttggcttt gacttctatc ggtttgaatg tttaaactag
     3901 cctgtgtctc acttgttctt tggctaatgt ttgccaaagc tgtatccatt tgcccatttg
     3961 ccttcgatat ttccatttta aaatcctttt taaaatttcc tattgctagt taaaagctta
     4021 tatcgacaaa tttataaatt tatgaacacc tataaagaaa attttatttt tcaataataa
     4081 aaaaataata agcaaaaact gtgccaaaat tttaaaataa atctcaatta tcttaaaaaa
     4141 tttcaaattt attaaaaaga tctggattat tttctaaaat attacgcaag atcaaatctt
     4201 ctatcacgct tttagtgcaa tctgtttgct taggccaagc tcttaaataa ccctcagctt
     4261 cacctttagc acttgcatct actccaagtc tttcttcttt gataaaaata tctcttttag
     4321 catctatatt atttaccaca cgccaaacaa gcatataaga attttcaagc ttattttcag
     4381 catctaaaaa tactaaaatc ctaaaatgtt ttttaaattc taaaagtttg tcaaaacttt
     4441 gttcgatttt ttctttttta tcaagcaaaa tacaaactat aggactttta ctttctttat
     4501 aaaattgctt taaatttaaa agttctacct tagttttaaa aagttctagt aatttttcat
     4561 cttctaaaat ttcaagctct tcaacttgta tttcttcgca agcatcaagt cctgctttac
     4621 ccccaaaaca agaattaggt gaagcatgat ctaattgatc acaaattcct tctgaaatta
     4681 aaattttctt tgtattaaaa cgatctaaca tataaggaat taaagcatca taatctttca
     4741 aagaaggtgc atttttatcc acaaaaattg catgcttaac aaaactcatt tgccctactc
     4801 cccaaaatgc atgcataatt tgttgcgcat gagcgggata ttttgcatcg atttttgcta
     4861 agataagatt atgaaagacc ccattttcag gcatattata atcaattaaa tcaggtactg
     4921 aagtttgaag caagggtaaa aaaattcttt cggtaccaag ccccatgatc ttatcttcta
     4981 aaggaggctt tcctacaacc gttgcttgat agatcgcatc ttttttagca taaatttttt
     5041 ctactttcat cacaggaaaa agttcagcag gagtataaaa acccgtatga tctccaaaag
     5101 gaccttcgat tttaaactct tctaaatcca cataaccttc aataaccaca tcactatcat
     5161 aaggtataaa aataccattt tcacaaggag taatttttgc aggagttttt ttaataaaac
     5221 cataaagtaa aagttcaaaa attcccttag gtaaaggtgc ttgagaacac caaatataaa
     5281 gcggatctcc acctatggct atacttacag gcattttttt aaaaccagca tttttgtatt
     5341 cgtgataaaa atttgcccca tctttatgaa tttgccaatg cattaaaagt tcatttttat
     5401 cactcatttg caaacgatac attccaagat tattttgagt tttatctaaa ttttgtgtat
     5461 aaacttgccc catggtaata aatttacccg catcatcttc ccaagttttt agtatgggaa
     5521 gttcttcaag tgagtttaaa atttcataat catacaaggc tttatttttt ttcagtcttt
     5581 taggaggaat atttttaaaa cttaacaaat tcataaaaaa atccattttt gctttaaaac
     5641 tcgtaggaat atgaagcttg atgagttttg aaatttcttc agccacctct tcataatcac
     5701 gtccaaaagc taaatttaaa gcctttttat tgcaaaaagt attcatcaaa acaggaaatt
     5761 tatattgttt atttaatttt ttatctatag gatttttaaa taataaagcc ttcccttttt
     5821 ctcctttttt agcttctata taggctaaat gagcgatttc aagatctaca tctacaggtt
     5881 cttcaattac ccttaaaaga tcattttctt ttaaaatttg aataaattct ttcatatcat
     5941 actctcagct ttttttaaaa gttctttagc acctttagca ataaactcct tagccaaact
     6001 ctctccaaaa cctttaaaat cattcttttt aatcattctc ttatctttta aaatttcact
     6061 tccatcgggt agtccaagta ccgcacgcac acaaatttca tctcctaaga gttctgcgtt
     6121 aatacctata ggaacttgac aacctccttc taaagtagca ataaattctc tttcaatgct
     6181 tgtttcaatc aaagcatttt catcatttaa acattttaaa agttctaaaa ttttttcatc
     6241 atttatgctt tctataccta aagctccttg agaagccgca ggaataagct catctttgct
     6301 aaattcataa acaaaattca cttgcttatc taagtttaag cgtttaattc ccgccattgc
     6361 caaaataatc gcatcaaaat cattattttt taatttctct atacgagaat tgacattacc
     6421 acgcaaagaa ataatctcta aatcaggtct taataataaa agctgcatct tgcgtctaag
     6481 actagtagtg cctatttttg caccttttgg taaagaaaga aaatctttat aattttgact
     6541 tagcatagca tcattgcttt gctctctttt gcttaccgct gccaaaacta aaccttgagg
     6601 aaaaaaacta ggcacatctt ttaaactatg cactgctaaa tgtgcttctt ttcttaacat
     6661 actttcttca agttcttttg taaaaagtcc tttaccacca atttttgcca aaggagaatc
     6721 aagcaaaaca tcgccttttg ttttaaaacc ttctaaaagc acttcaattt gatgtgtatt
     6781 ttttaaaatt tgggctacat gttcactttg ccaaagagct aattgacttt ttcttgttgc
     6841 aataataagc ttcattttct atcctctata atttcaacat caataatttc ttcattagaa
     6901 ttttgatact cttgcttggt gtattgatat tttgatttag ttattaattt caaagcaata
     6961 ccaaagaaaa atacaaaaat tccaaaaaca cttgtaataa tccctggaaa aataagcaaa
     7021 aaccctgcga taacaaaaga aaattgtgtt aacatatcct ttaagccacc catttgaaat
     7081 tcaagcatat ttttccaaaa aattcccaat aaaaccgcac caaaaatcat actcaaaagt
     7141 atgaaaaata aaaaattacc aaaaccaaaa aaaactataa aaagtacact tgcaataatt
     7201 tcaagtacaa ataaagggct taaacttaat ttataattca taacactttc tttttaagaa
     7261 tttccataag ttcatcagtt tttataagtt cttttaccaa accttctctt tggataagct
     7321 ctatttcatt attttctaat cctttaccaa taactaacgc ataaggaaag cccataagtt
     7381 caaaatcatt cattttaacc ccaaaacgct catttctatc atcaagcaat acttctaatc
     7441 caagattagt taaatcccta taaagcttat tagcaaattc taaagccttt tcatctttga
     7501 gatttgaaac aataatttca agcacaaaag gagctaaagt tttattccaa atacatcctt
     7561 tttcatcatg atttgcttca atagctacag ccaacaagcg tgaaacacct atgccgtaac
     7621 atcccatata aaaaggctgg cttttgccat tttcatctaa gaaatttgca ttcatcgctt
     7681 tggaatattt ttgtcctagc ttaaaaatat gccctacttc tataccttta ctttgtttta
     7741 attttgctcc acatttaaca cagcaatccc cttctttaac ttcaatcaaa tctttaaaac
     7801 gatctttatt taaatttaca acatcaatac cgattaaatg ataatctttt tcattcgcac
     7861 ccataatcat ttgcttttcg ttttcaagct caaaatctat ataaaaatct atatctttta
     7921 atcccacaaa acctataaaa ccagctacta agccagcttt ttccaattct tcttcgctcg
     7981 catcgactag ttcaagggca ctgcaagtat tttgagcctt aacctcttgc aaatcatcac
     8041 ttcctcttat aaaaaacaca actaatttgc tttcattttc ataaatagct ttttttacca
     8101 ctgctttaat cgtataaaaa gcattgattt taaaaaattg tgctaaagaa tctatagttt
     8161 taatatttgg agtgtgaaat ttacttgcat aatttgcttc aggacgctca tcttgacaag
     8221 tttttttagc tctttttgca gcttcaacat tagccgcata atcacaattt tcacaaatta
     8281 aaatatcatc ttccccattt tttgctaaaa ccataaattc cttagagcca cttccaccaa
     8341 tagccccact atcagcttca actgctctaa aatcaagccc cattctttgt aaaatttgag
     8401 aataagtttt atacataagc tcaaactcac gccctaaatc ttcttcatta gcatgaaaac
     8461 tatatccatc tttcattaga aattcacgac atcttaaaag cccaaatcta ggccttgctt
     8521 catcacgaaa tttaagtcca atttgatata aatgcaaagg aagttgttta tagcttgtga
     8581 ttttgttttt taccaaagaa agcatagctt cttcatgtgt tggacctaaa acaaattcat
     8641 tttcttttct gtctttaaaa cgcaaaagtt cttttccaaa aacattgtaa cgcccacttt
     8701 cttgccacaa acttgcagga gtgataaaac taagatttac ttcttgtgct ccagccttat
     8761 ccatttcttc tttaactata tttttaatct tgtctaaaac tctttttccc aaaggcaaga
     8821 aattataaag tccgctacca atttgttcta caaaacccgc acgcgttaaa aaaatatgac
     8881 taggtaaact cgcatctttt ggcgcttctt ttaaacttgg tgcataaaat ttagtaaatc
     8941 tcatcattat tctccatatc aaattcacat ttatattgat ttaaaccttc aagattattt
     9001 tgcaaatcaa aaacataacg catagcatta atcactgtat cgctttgcat tttaccttgt
     9061 aaatgtttca aatttacagt aggcgtgtgt aaaaaagcct taaaaacttg atgaatcaac
     9121 tttctagcct cttctttatc agattttttc aaatatcctt tttttaacgc aatttcaagt
     9181 tgtttatctg catattcttt agcttgcaag cgtatagctt tgataatagg catcaaagcc
     9241 aaatcgttta aatacctaaa aaattcactt gtttcacgac ctattatccc ataagccata
     9301 cgagcttctt gttctcttag tgctaaattt ttttgaacca caatttcaag atcatctaca
     9361 gcaaaaacag atatattttc attttcattg atatcaatat cccttggaac tgcaatatca
     9421 aaaaaatacc ttttataaga aagttcttct attaaagaat ttgtaataat agcatttggt
     9481 gcattggtag ctgagaaaaa aaactcgtat tgatttaaat atttttttaa attttctaaa
     9541 ctatcatatt cgcttaaaac accaagtctc tcacacaaat ctttagcttt ttgtaaatca
     9601 cgatttaaaa taatcacctt agcacccgca gcaattaaat gttttgccgc gagttctccc
     9661 atctctccag ctccaataac aacagctttt ttttgcgtta aatctgcaag ttcttttgct
     9721 tttgccacgg caacgctagc tacagaaata gaatttttag aaatttgagt ttcattgcgt
     9781 accttagcag cacatttaaa agcactatgt actgctcttg aaaggtgtac tccacaaaaa
     9841 ttatttttta cagcaaaagc aaaggcatct tttaattgtc ctgctatctg agtttctcca
     9901 accaccaaac tatccaaaga acttgctaca gaaaaaagat ggtggattgc tccactatct
     9961 tcaaaaatat cagctttttc aagtaaaata tctttatcaa catcacaaag taaagccaaa
    10021 gatttaacaa taaactccgc acaggccatt tttacaaaag caacaatttc aacacgattg
    10081 caagtactta taaccaaaca ttcttcaata ttttcatgag tgctaatgat ttttaaaaac
    10141 tcactttttt tagcttcatt ggaaaagctt aacttttccc ttaaggcaat atctgtattt
    10201 ttatgagtaa aagatataca ataatacatt aaaattccct atctatcata gctttaataa
    10261 tatcattaag cttgttatta tcatattttt caatcgcttt actagccttt tttgcataag
    10321 ttttagcttc taaaatagct ttttctaaag ctttttgttc ttcaaattta gtttttagcc
    10381 actctttttc attttcattt aaatcttttt taaataaagt ctgcaaatat atcctatctt
    10441 gttcttgtaa attttcataa agataaatat aaggtaaggt agtcttaccc tctttaaaat
    10501 cattcatagc aggttttcca agaatttttt catcactctt aatatctaaa atatcatcaa
    10561 tcatctgaaa agcgagtcct aaattttttc catattctgc aaaatctttt tcatataatc
    10621 cagccaaaat agctccgcat ctcgcacttg cttcgatcaa aacagctgtt ttattataga
    10681 tcattttcaa ataagcttct ttattgatat taaatttctc tcccaaatca acatccataa
    10741 gttcgcctat agcaagcttt acaacagcgt ctgaaataat acttgcaaat ctagcatcca
    10801 ttttacttaa ttcataaaag gcttttgaat acaaaatatc gcccaacata agagcatttt
    10861 ttgtaccaaa ttcagcatta acagatcttg ccccacgcct taattcactc tcatcgataa
    10921 tatcatcatg taataaacta gcaagatgta tcaattctat agctgcacaa attttaaaag
    10981 caatctcact ctcatctgcg atagctaata ataatttaga gcgtaatttc tttcctgatt
    11041 ttacatttga aagcatattt aaaataggtt catagccaag ttcttgtaaa aactgtttta
    11101 ttaattcatc tattttttgc actatctttt ccttgttaat tgctattatt attttctttg
    11161 cttgttaatg gttttacctg aggttcgtta aaattaatca taggaacaac ctgattattt
    11221 tgcggtggat tttgtaaagc tttttttctc ggatctaaaa attctaccat taagcgagat
    11281 tccttatctt ctatataaac cgtaaaagtt gccaaacctt tattataacc actaaattct
    11341 aaaataagtc ttgctctatc aatgtgtgga ttggtataat caggtattaa agtttgagtt
    11401 acccaatcta aatttcttct taaactcatc acaaattgac gcggatattt gcgaaatttc
    11461 gaatgtacga tgatattagt attatcaaac aaagtccaat aaaaatcaaa attttgcacc
    11521 ttatcttcat agcctatttc tttaatctgc acactagctc tctcatcttt tttaagtata
    11581 aatttataag tataatcaaa agttggttca gatgctaaaa cattactaaa aataaaaaaa
    11641 atacaaatta aacaagggct tattttaaac aattttagcc ttcgtgtcct aaaatttttg
    11701 cgcccaattc tatataaata tcattttgcc tttcttctat aaaatcacca ttttctaata
    11761 tgaaattttt tacatccatt tctgttaaac cttgtttttc caaaagttcc accatggcaa
    11821 tatgatcagc aaaaaattcc tcaaaaactt tttctaaggc tcctaaattt ccattttgta
    11881 taatttctat aaatttttct tttggagttt tattaaacat ttcatcaaaa aaatccatta
    11941 attttccttg aaaatataag tttttgatta taaaatttta atcgttaaaa gtagctaaat
    12001 taaaataatt aaaatttaaa ttttatttgc aatgtgtaaa attttagaag ttaaattccg
    12061 catgatgcgg aatttattat gaatatggtt ttgcttgagt ggcgtatttt acacccagat
    12121 caaaagcttt agcatttgca tcacgagttt ttgcaggaac catatgaagc atagtttctt
    12181 ttaaaacatc taaatctata catttgctca tataagcagc aattgcaagt gcaacaactg
    12241 attgagtagc cacatttcct acctcatctt tagctatggt gataataggg atttcaaaaa
    12301 tttgccattt tttataatct tcactttcag gatgtactaa atttggctct acaactataa
    12361 tacctccttc ttttacaccc ccacgaaaac ctttataacc cttatctgca gtcgaaagca
    12421 taaaatctac ttccccttct acagcataag gaaataaaat ttctttatca tcaatgataa
    12481 tatccacctt agtagggcca ccacgcactt gtgaagtgta agtagaagcc ttaaaagctt
    12541 gacgaccttc tttaatggct gcttctgcta aaatttctcc tgcggtgata acaccttgtc
    12601 cgccttcacc gccaaatctt aattgatatt tcattttaaa gctcctaaat ccaccattct
    12661 tttttctttg gctgcacgac gtacttcttc ataagcgtgg cagtattctg gctgagaatt
    12721 atcttcatgt aaaattcctg ttggaaattt atcttttctt tcttcaaaat ccatgctttc
    12781 aaatttagct ttatccacaa cgcgattttt aatccaatca agcatagcta cagcttcgcc
    12841 cattttgttt tttctgccta gattgatatg acaatttgaa aaaacatcta caaaactata
    12901 acccttatgc gctaaagcct tataaattaa attttcaagc ttattagctt cgatcacatt
    12961 accccttgcc acaaaagaag ctcctgcagc tttagttaat tcacacgcat caaaattagg
    13021 gtcaatattt ccaaattgag ctgttactgt ataaaaacct tttggagtgg ttgggcttgt
    13081 ttgggaattc gtaagtccat agatgaaatt attgattaca atatgtgtta aatcaatatt
    13141 tctgcgacaa ccatgtatag tatgatttcc accaattgcc aaagtatccc catctccact
    13201 tactacaata acatgtttac taggattggc tagtttaatg cctgttgcat aagctattgc
    13261 tctaccatga gtagtatgaa ctgtattgca atttacataa gaactcattc tgccactaca
    13321 acctataccc gaaacaagac aaacatcatc catattccaa ccaagttttt ctatcgcgcg
    13381 gataatacat tttaaaacaa caccatcgcc acatccccaa caccattgag taggcatttt
    13441 atctactctt agatattcat cataattaaa agccatttat atattctcct ttaccttagc
    13501 aataatttca cttggagtga taggacgacc atttgcacgg tgcaaactaa taaaatcgcg
    13561 acgcgaagtt actctttcaa tctcttcaag atattgtccc atattaagct cgcttaccat
    13621 gactttttta aatttgctta caacctcagc aatttttttc tcagccactg gataaagagt
    13681 aattggacgg aaaagtccca ctttaatccc ttgctctctt aatctttgta tagcttcttt
    13741 tgctgaacga ctcacgcttc cataagcaat gattaaaaat tcagcatcat caagcatata
    13801 ctcctcataa gtacaaatat cttcttgatt gttttttatt ttacctatga gtctttccat
    13861 attttttttc actataactc catcttcagt tggaaaacct atatctccat gatgaagtcc
    13921 tgtaacatga taacgataac ctgtaaagaa aggatttaaa gttgcaggct cattttctcc
    13981 tgctgcataa ggtttataat cctttttatc gccttcaaat tttttacggt tatatacttt
    14041 aatatctttt aaatcaggta aaaccgcttt accattcatg tgccctacag tttcatccat
    14101 aagtaaaaat actggagtca tatatttttc agctaaatta aacgctctaa tggtttctgt
    14161 ataagcttct tcaagacttg caggagcaat agcaatactt gcaaaatccc catgagttgg
    14221 tgctttagct tgaaacaaat ctccttgtgc tacacgagtt ggaagacctg ttgaaggacc
    14281 acctctcata acatttacaa tcacaagtgg aatttcagca ataaatgcaa gtcctatttg
    14341 ctctgctttt aaagaaattc caggaccgct acttgcagtc atggatttta ccccactcat
    14401 tgccgcacca atagccacgc taatacctga aatttcatct tccatttgta taaaagttcc
    14461 atcatttgca ggaagcatat ggcttaattc atgagctatc tcactactag gagtaatagg
    14521 ataacctcca aaaaatttac atccacaatc aatcgcagct ttggcgatta aaacattacc
    14581 tgttgctata acttctctca ttatttttcc tatgctaatt ttttgtattt gttatttttt
    14641 acggctacag ctctatcttt agcctcagca gtaagtttgg caaatttaaa ttcatctctt
    14701 tttgccacca taatagcaaa atcagggcaa tgtatctcac actcggtaca gcctatacag
    14761 gattcagggt gtaccacctc tatcatttgt cctaaaaccg catgcacatc atcgcgcata
    14821 gctaaaaccc cagcggggca atagctaaca caaatattac atgctttaca tctatgctca
    14881 tctacccaaa caggggtatc ttttggagct gtcatactca tgtttttttc ctttattaac
    14941 ctaatatttt ttgaatttct tcaccaatta aagccggaga atccaccaca tgaattccat
    15001 agctttttaa agcttctttt ttagctgcag cactttcatc agcacttcct actatggcac
    15061 ctgcatgccc cattcttttg cctttaggag cagttgcacc tgcaatgaat gctaccacag
    15121 gtttgctaat attttcttta ataaatttag ccgcttccac ttccaaacta ccaccaattt
    15181 cacctatcat tacaatagct ttagtttcat catctttttg gaattcactt aaaagttctt
    15241 tataagcaag acctatgata ggatcaccac caattcctac tgcagtagaa attccataac
    15301 caccttgaac tacctgatta gcagcttcat aagttaaagt tccacttttt gaaataagcc
    15361 ccacgcaacc ttttttaaaa ataaaacctg gcataatacc taacttacat tcttcagaag
    15421 tgataatacc tggacaattt ggtccaatga ttttcatacc ctttttatta gcatattgct
    15481 tagcaaacat catatccttt acaggcgtat gctcggtgat tacaactgca agcttaatac
    15541 ccgcatcagc tgcttcaatc acgctatcac ccacagcaaa agcagggaca aagatcaagc
    15601 tcacatcagc ctttgttgct ttaaccgcat ctgcaacggt atcaaaaact ggtttaccta
    15661 aatgagtttg tccgccttta tgaggggtga cacctccaac tatatttgta ccataagcca
    15721 tgcattgctc agcgtgaaaa gttgcttctt tacctgtaaa accttgaact attacttttg
    15781 tatttttatt aaccaatata ctcattttcc atccttatcc tactaaactt tttacaagct
    15841 ctgcaccgtt tttaagattg gttgctgctt tgatattttt aagatttgaa ttatctaaaa
    15901 ttgtctttgc ttctgctgcg ttagtgccat caagacgcac tacaattgga atatttacct
    15961 caacattctt agtagcttct aaaattccat ttgctatcct atcacaacga acaataccac
    16021 caaagatatt gataaatata acttttacat ttttatctct taaaataatt tcaaaagcct
    16081 ttgcaacagt ttctggagaa gctcccccac ctacatctaa gaaatttgca ggttttgcac
    16141 cactataatt aataatatcc atagttgcca ttgctagacc cgcaccattt accatacaag
    16201 ctacatctcc atctaatttc acatagctta agccaaattc agccgcttct ctttcagcag
    16261 gattttcttc agtagtatct ctaagttcag caatttcagg atgacgataa agcgcactat
    16321 catcaaaact gcattttgca tcaagggcat aaaaatcccc ttctgcagtt ttaattaaag
    16381 gattaatttc aagcatattc atatctttat ccatgtaaag cttataaagt ttagctatca
    16441 tagaaatgag ttttttgcct tcatctttat caagtcccaa aactctcgct acttcaagtc
    16501 catgaaacat tttaaatcca atttgtggat caatacctac ttttgcaatt ttttcaggac
    16561 tttctttggc tactttttct atatccatcc ctccttcact tgaagcgata atggtaattt
    16621 gctctgccat tctattaaac aaaatagcca aataatactc ttttactata ttagcaccac
    16681 tttctatata aagtttttgc acaagtttgc cttcaggtcc tgtttgatga gttactaaat
    16741 tcattcctaa aattttactt gcataatctt ttacctcatc taaattctta gcgattttaa
    16801 caccaccacc aagaccacgg cctcctgcgt gaatttgagc tttaactgcc caaacactac
    16861 cgcctaattc tttagcatta gccacagctt catctacgct aaatgcaact tttcccttta
    16921 aggtagggat accattgtct gcaaaaattg cttttgcttg atactcatgt atgttcattt
    16981 attctccttt atattgatat ttgattaaag atttttctaa tttgtctttt tcttgcaaac
    17041 taagatccat tttcatgatt tcaatcacac cttcaagtcc taatcttgcc ataactccca
    17101 aggctttgtt ttgcactcca aattccccat gtaaaatcac actcataggt aaaaactcgc
    17161 cacttcttat agactcaagc attcttatac aagcactagc aggggctaaa taagctgaag
    17221 ttttaagatg tttgattact ttagctccgc ctgttttaac ttcattttct aaatcctcaa
    17281 attcttcttc atttaaaaat tcgcttatat ttttattttt aacacttgcg taagatttta
    17341 ccaaaaccat atcatcatta tgaaaaccaa taagtcttgt atccactctt gacattttga
    17401 cattaagttt tttggcaagt tcatacttaa atcttgcatt gtctaaaaca cccgccatgg
    17461 ctataatttt ctttgatgaa aaaatcccgc tttcataaag agtattaagt agaaaatcca
    17521 caggattagt taaaataata aaaagcggat cttctgtaaa atctttaatt tttttagcac
    17581 aatcaagcat aatgcttgta tttaactgaa gcaattcttc tctactttgc ccatcttttc
    17641 tagcaaaacc tgcactaaaa agcactatat ctgaattttt ggtatgagta taatctttag
    17701 tgcaaagtaa atctatattt aaatttaaag cagctatgct ttgagtaagc tctagttctt
    17761 ttgcgtaaag caaatcctcg ttaatatcta ctaaaacaat ttcatttgct atttctctta
    17821 aaatcaaagc ataagctacg cttgaaccta cattgccagc ccctataaca gtgattttca
    17881 tctttgtcct attttttcta aaatagcgtt aaaagttgca cttggacgca tgattttatt
    17941 tgctttttca tcatcaaatt tataataccc acccaaatcc actttcacac cttgtgcatc
    18001 gttaaattcg gctctgattt tttcttcatt agaagaaagc tctagggcaa tatctttaaa
    18061 aaagctttga agctccatat cacttgcctg tcttgctaaa tgatttgcaa aatacattgc
    18121 taaataaaaa tgacttgttc tattatcatc ttctttgact tttcttgatg gagctttatt
    18181 attttcaagc cattcgccta tagcctcatc aagacattct gctaaaacct tagctttatg
    18241 attgccacac ttatttgcat aaaattccaa acttgcttgc aaagccaaaa attcacccaa
    18301 actatcccaa cgcagatgat tttcttcgac taattgttct acttgtttag gtgctgaacc
    18361 ccctgctcct gtttcaaaca tagctccacc atttaacata ggcacaacag aaagcatttt
    18421 tgcacttgtt ccaagctcta aaataggaaa aagatcggtt aaataatccc ttaaaacatt
    18481 acccgtgata gaaataacat ctttaccttc tcggattaac tctaaacttc ttaaacaagc
    18541 ttcttttgga gttaaaatgg ctacattttt acccttttct tttaaacgat tttgtaccaa
    18601 agttatcatg attttattac tagctctttt gctatctaac caaaaaatag cttcggctcc
    18661 actaagttct gatctttcta tacctaaatc aatccaattt aacactgcat caaatttagc
    18721 ctgattagct ctataaatat caccttttct aaccttatgt tctaataaaa ctttaccgtt
    18781 agaaactatt ttaaaagttc cttcttcttt agccacaaag gttttatcgt gcgatccata
    18841 ttcttgagct tttttagcca ttaaacctac attagataca ctgccaagtt ttgaaggatt
    18901 taaagtacca tttttatgca aatcttcaat aaccgcctca taaatagttg cgtaagtttg
    18961 atcaggaatt acggcatttg tgtccttttc cttaccttcc ttatcccaca atcttgcgcc
    19021 atttttaagc attgcaggca tagaagcatc aacgataaca tcgcttggaa catgaagatt
    19081 tgtaatgcct ttatctgaat ttaccataga aatatctgca gatttagcta aaatttcatt
    19141 gtattttttt aaaatttcat cttttttgct tgaattttcg atcttactta aaagctcact
    19201 taaaccatta tttggattaa tgcctaattt ttcaaattca tcttgaaatt cgataaataa
    19261 ttctttaaaa aatactttta ccgcataacc aaaaagtata ggatcactta ctttcatcat
    19321 tgtagctttt aaatgcaaag aaaaaagcac atcatcatct ttgcttgctt taatttcttt
    19381 tgtataaaat tcctgaagtt tttgcacatc cataaaagta gcgtctaaaa tttcattttt
    19441 ttcaagtttt aagccctctt ttaaaatttc ttttttacca tcaacgcttg taaattctat
    19501 attagccaca caatcttgat cgattaaaac cgctttttca ttagagaaaa aatccccttc
    19561 tttcatgtaa gaaacacgag tttttgagtt tggattaaac tcaaccacac gataaggatt
    19621 gttttttgca taatctttta ccgcttttgt tgaacgacga tctgaatttc cttgtcttaa
    19681 tacaggatta actgctgaac ctaaaacttt ttgatatttt gttttaattt gcaattcttc
    19741 atcatttttt ggctcatctg ggtaatttgg taacatataa cccttatctt gcaattcttt
    19801 aatcgccgcc ttaagctgag gaatagaagc tgaaatattt ggggttttaa taagatttgc
    19861 atccgatctt ttgacaagct cacctaaaag ttctaaagca tcttcacatc tttgttcctc
    19921 ttttaaatac tcactaaaag tagctaaaat ccttccagac aaagaaatat ccgaggtttt
    19981 tactcctata tgtgccctac ttaaaaaagc tttcactata ggcaaaaacg aataagtcgc
    20041 aagagctgga gactcatctg ttaaggtata agtaatttgc atttttagtc ctttaaaata
    20101 cttattttta ttttcatttt taagtatatt acaaataaaa aaaaatgcaa gagtaagttt
    20161 aaagtttgtt ttagttttca aacaaacttt aaatattttt aattaagtaa attagcagga
    20221 agttgtatga tatttttaat aagattaaaa ggggttttta gggtatctgt taaaatttcg
    20281 gtatgaaatt tagggtcatc tatacttcca tctattttta agtttgtgct aatttcttga
    20341 tttttaccta aaattacata atttaaaatt ggaaccttgg atatagcttc tgaagctgat
    20401 tttaaagttt taagctctaa actaaaatcc actgtattta atcttaaatt tgctgatcct
    20461 aaaccatata tatctacact atcgccattt aaattaatag ctgaaacact taaaagatct
    20521 ttttttctat taaaaataat ctttccatca tgtaagctta aacctttttg attaaaagtt
    20581 ggagatttaa acatcaataa acttggtaca gtatcgatga aggaaataag ctgatttata
    20641 cctcttaaat ccttcacata agtattttta aaatcgatct gtccatcaaa atactccaat
    20701 ccacttcctt ttatacttaa gttaaacact ccatcttgaa cagcttgttt ttgtaaaaac
    20761 tcatttaaat aattatcatc aatattgcta acgtttaaat ttaaatcatt agaagaataa
    20821 taaagatcaa attttgcatt tcctctagaa cctttaagat ctaaagcatt gccttttaaa
    20881 tcagcttcta ctctatcaaa agccaaagtt ttattagaat ctgccaaaat taaagctaca
    20941 tttgctccac caaaactaat attttgggta ttagtagcaa tatcaaatgt tgaatttgaa
    21001 gagttggaat gttttctata aatataactt aaatttttta aatgaatttc tttattatca
    21061 gaacttattt tagcacttgc tgtatcactt tgagtatgaa tttccataat gcccttattt
    21121 tttacaatat caaagctatc attttcataa ggagtttgac cgttgataag taaattattt
    21181 ttaaaataag tatcattaac acttgcatta aaatcttcaa aatttaaagt tttataataa
    21241 acatttttag catcgataaa cccaagcttt ttaagtaatg gagaaaatga aaataaaatc
    21301 ttaggattat taagattagc ctcaagtcca tctttaaaat ttaaaatcaa attccactga
    21361 ggaatgctaa tattaacatt ttgcgaataa tctaatttta cttctacatt ttgatttttt
    21421 aaatctaaaa gctctccatt gtcaaaataa agccttgaaa tctgagtatt gaaatttcct
    21481 tgctgttttt gtaagtcaaa tttagcatta aaatcagctt ctaaaaagcc atttttaaca
    21541 ctggcatttt ctatatttaa atcattttga tttaatttta caaatgcttt tgtaatatta
    21601 aaatcagcca aagaaatact agcattctct aaagctaaaa taccactata agaaatttca
    21661 cccttatcat gaaaatcaat tttaagctcc aaatcacttt taatttttcc gcttttttga
    21721 taaaaaggta gtgaaaaatg ataatcctct aaagctttag caagtttttc gtcaaatttt
    21781 agattatcag acttaatgcg caaataaatc ccaacttttt tttcatcaaa caaatcatat
    21841 agataaacct tactagaact taaatcagca ccattataga aagctttatt aaagacaaaa
    21901 tcgagctttt gtttgtttaa atttaaatcg agttttggaa tttcaatagc attcatttta
    21961 tcatccaagc gaactttgac attattaaca taacctgatg cactaatatt gtctaaataa
    22021 taattatctt tagtaaaatc tataaagccc tgcaaataat ctaaatgata aaattctccc
    22081 ttagccctat atgctaccca aagatttaaa ctctgcggaa gttctattct tttattaact
    22141 cttttaaaaa tttccgtaat atttctaatg tttaaatctt ctattttata agctaaattt
    22201 ttatctttgt aagagatgct tgcgttaaag tcaagcaatt ctccacttgc tctaccttga
    22261 aaataataaa actcgctctt agtattgatg cttaaa
//
LOCUS       DAPIVO010000025        22282 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.025, whole genome shotgun sequence.
ACCESSION   DAPIVO010000025 DAPIVO010000000
VERSION     DAPIVO010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22282)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22282)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22282
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.025"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..549)
                     /locus_tag="RJ239_000855"
     CDS             complement(<1..549)
                     /locus_tag="RJ239_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7330984.1"
                     /translation="MKILLLNENPVVSRLVSLSAKKMSYDFEELNAYSENLGNYDVIV
                     VDSDTPAPLKILKEKCDRLIFLAPRNQNVEDIDAQILQKPFLPTDFLNLLNNKDANKH
                     TSIDLPMLSNDENPYADISLDLDNLNLDDLPDENSLDINSEGMEDLSFDDDAQDDNSN
                     KTLETQNLEHDNLEQEAIKEQTQ"
     gene            complement(606..1373)
                     /gene="fliR"
                     /locus_tag="RJ239_000856"
     CDS             complement(606..1373)
                     /gene="fliR"
                     /locus_tag="RJ239_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliR"
                     /protein_id="HDV7330985.1"
                     /translation="MEFVNYLGDKNVVTFMLLLARMSGLIVFFPFFSHNSIPMVIKST
                     IVLFLTMYLYPLARLESLHLDSFFVLQLISEVIFGMIAGLMLQIIFVIIMMAGEQIAF
                     TMGFTMASILDPSSGTSMPITSQILNLLALMFFLAFDGHHLMLLFLSHSLGYISLGGF
                     YPHENLMHYLNMGMFNIFIIGFTMSFPILGISLLADVIFGLLMKTMPQFNLLVIGYPI
                     KIALGFVVLIAILLVMMQYFKNLILELFTHMQTLFFF"
     gene            complement(1360..1995)
                     /locus_tag="RJ239_000857"
     CDS             complement(1360..1995)
                     /locus_tag="RJ239_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7330986.1"
                     /translation="MELLRAENLSHSFDYPLFEGLNLTLNTKDCIAIQGSSGCGKSTL
                     LHILSSLLIPKKGEVFFKGSSLYQIDENERLKIRRYDFGIIFQTHYLFKGFSALENIE
                     LASVLSGQDLDEKILKRLGIDTLLHQKIGKLSGGQQQRVSIARVLCKKPKIIFADEAT
                     GNLDFDNAKNVIELLISYVKENDAALFFVTHDSKLASFCDKTYTINANGIC"
     gene            complement(2008..3081)
                     /locus_tag="RJ239_000858"
     CDS             complement(2008..3081)
                     /locus_tag="RJ239_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HDV7330987.1"
                     /translation="MAEITAAMVKELRESTGAGMMDCKNALSETNGDFDKAVQLLREK
                     GLGKAAKKADRLAAEGLVSVKVSDDFTSATVSEINSETDFVAKNDQFIALTKDTTAHI
                     QSNSLQSVEELHSSTINGVKFEEYLKSQIATIGENLVVRRFATLKAGANGVVNGYIHT
                     NGRVGVVIAAACDSTEVASKSRDLLRQICMHIAAMRPSYLSYEDLDMTFVENEYKALV
                     AELEKENEERRRLKDPNKPEHKIPQFASRKQLSDAILKEAEEKIKEELKAQGKPEKIW
                     DNIIPGKMNSFIADNSQLDSKLTLMGQFYVMDDKKTVEQVIAEKEKEFGGKIKIVEFI
                     CFEVGEGLEKKTEDFAAEVAAQL"
     gene            complement(3081..3872)
                     /gene="rpsB"
                     /locus_tag="RJ239_000859"
     CDS             complement(3081..3872)
                     /gene="rpsB"
                     /locus_tag="RJ239_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HDV7330988.1"
                     /translation="MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKT
                     LRYFRYTYNIVRDAAAEGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNF
                     GTIRQSIRKLEVIEKMEEDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIF
                     VIDTVKEKIAVQEANRLRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEA
                     INEGKALREQDGEALANEEKEITDEEKKEVLDEAMSEEDFGEEQE"
     gene            complement(3988..5151)
                     /locus_tag="RJ239_000860"
     CDS             complement(3988..5151)
                     /locus_tag="RJ239_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDV7330989.1"
                     /translation="MLEKQMIKFILSKWNYGNFRIVFWDQEEFHVGNQPAKFSLIFKE
                     KIPFLKLFSDTSLVFAKHYMESKLEIEGDYDEIAKVLYYFSNKRFLKNTEDILSKIAQ
                     KQESKNIKSHYDIGNDFYKLWLDDTMSYSCAYFKEPNNTLYEAQINKIEHTLKKLDLK
                     EGEKLLDIGCGWGWLSIMAAQKYGVKVVGITISEEQCKKAKERVKELGLEDKIEIRLQ
                     NYQDLEFENYFDKVVSVGMFEHVGKENLGLYFMKVKQVLKPGGSMLLHSILAMFEGKT
                     NAWIDKYIFPGGYLPSLREVVSAMSEWDFHLLLAESLRMHYAKTLDLWDENFNKVLDK
                     VREKYDEEFIRMWDLYLRSCASAFRVGSVDLFQFLITKEINNNLSLTKDYIYK"
     gene            complement(5279..6403)
                     /locus_tag="RJ239_000861"
     CDS             complement(5279..6403)
                     /locus_tag="RJ239_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDV7330990.1"
                     /translation="MREIKIFLVVVVFTALVYWGVEPYAHSVMKPHVAPANFDFAVED
                     TTFAKGIVEAKELALKDAQASGDAKRIESANKELEKAKEELSKVETLWADVAKIDFAK
                     GDAKKGKEFFENNCFACHGVKEDGIAANITDSSMGVIPPDLSAAGAIFDEKFLAALIM
                     HPALALKVDHKFGDAFIMTAYNKDTSGESEEATNANIANVIAYLKDVSVKFEANEDAT
                     IKKDVEAKYAKMENSAQKAALMEKDIKFAKDKATFIEACGRCHDMKYDSFFTPSNQND
                     LKTYLGSVPPDLSMMIRSRGEQYLHDFINNTQKLLPGTAMPRVGLTEAAQAKVVSYID
                     QVGDSKKEERKTTGIYVMIFFVILSIFAIGWKRSVWSKLH"
     gene            complement(6400..7650)
                     /locus_tag="RJ239_000862"
     CDS             complement(6400..7650)
                     /locus_tag="RJ239_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HDV7330991.1"
                     /translation="MAQIRKANGLVDWLDQRLAVHKLLDVLMVKYWIPKQINFLWAMG
                     VILTTLFAVLFVTGLLLVMYYKPDTALAFDSVNKTIMQEVDYGWLWRHMHGVAASVVF
                     LIIYIHMLTGIYYGSYKKGREMIWVSGMLLFVVFSAEAFSGYMLPWGQMSYWAAQVIT
                     NLFGGIPFIGPELVIWIRGDYAVSDPTLTRFFMLHVCLLPIVIIAIIAFHFYSLRIPH
                     VNNEISEELDFDLEAEKYMAGDTKGSKVIPFWPGFLSKDFMYISFFMIFFFYLVCFKF
                     EFAMDPINFDPANALKTPAHIYPEWYFLWSYEVLRGFFFDIASIKAFDIGLAAFGIAQ
                     VIFFLLPWLDRSDVVKPAHERPLFFIWFWILLIDLIVLTVYGKLPPTGVNAWVGFYAS
                     IVFLLLLIVVLPVITIMERKGAKQ"
     gene            complement(7652..8155)
                     /gene="petA"
                     /locus_tag="RJ239_000863"
     CDS             complement(7652..8155)
                     /gene="petA"
                     /locus_tag="RJ239_000863"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HDV7330992.1"
                     /translation="MATSESRRSFMGFAFGSVAAVGGVFSLVAMKKTWDPLPSVKAAG
                     FTTVDLSGMQDGELRTIEWRKKPIFILKKDASMPKDEKRDVVVDNAAYTVVIGLCTHL
                     GCIPAYQPSEQLFKCACHGGEFDTSGKNVFGPPPKPLEIPPFKIDGTKLVLGEEGPEY
                     KKMIAEA"
     gene            complement(8246..9532)
                     /locus_tag="RJ239_000864"
     CDS             complement(8246..9532)
                     /locus_tag="RJ239_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic transporter"
                     /protein_id="HDV7330993.1"
                     /translation="MLAFFIFLSTLVLLFWRPWNLPIWVFSSLGAFFVFIFQLVDFKD
                     VCFVFSLVWDSSLTLVGLIILSFSLEALGFFDFIASKILHFSREKNQEKIYISTKKLM
                     LFLLIFVFFLSAFFANDGAILIITPIIIALFSTLKDCKNHAFILSSFLLSLSFLCDAS
                     SNALVISNLTNIITANYFKIEFLEFAKNMFLPNFFVLLSTIVTVFVLYVRVLPKRLEF
                     KLIKKEQISLKLFFLCIVFLFLFVISFFIGEIFNIKISFFALLWAGIFWLIILKIQGK
                     KSIKILFEAPYGVLLFSFGLYMVVFALHKIGVSEILVKSYAFLMQDKSGIFGVALISA
                     FGSSVFNNLPMVLIGDLALKEYFENFSFDSLMIYAHLLGVNIGPKLTPIGSLATLLWL
                     GVLARKGINISFWQYCKFGFLITLPVLVFSLFALIV"
     gene            complement(9533..11392)
                     /gene="mnmG"
                     /locus_tag="RJ239_000865"
     CDS             complement(9533..11392)
                     /gene="mnmG"
                     /locus_tag="RJ239_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HDV7330994.1"
                     /translation="MFDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNP
                     AIGGLAKGHLVKELDAMGGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRII
                     TRNKLLKLSNLEISQEQASALIVENDEVKGVKTNLENTYFAKKVILTTGTFLNGLIHV
                     GENKLQAGRVGELASVNLGNYLQTLGLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVN
                     PKAFSFRSRNFNPTQLPCYIARTNTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIED
                     KINRFSDKESHHLFIEPQTIDATEYYINGFSTSLPYEVQIQMLRSVKGFENAKITRFG
                     YAIEYDYIEPTELKHTLELKKIKNLYCAGQINGTTGYEEAAAQGFMAGINASLSIDMK
                     EPLILRRDEAYIGVLIDDLVVKGTKEPYRMFTSRAEFRLLLREENAILRLGKYGYDLG
                     LLSEQDFTYIQNIANNLQKGLEFLLSKEFTPNNQNNAFLESLGEDKISSIVNLQKIVA
                     RASFDIEKLKKLDPIFEIMDNYSLREILNEAKYYHYISMQKAQVEKMKNLSELKIPEN
                     FDFKSVSGLSNEVVEKLNHHKPPTIFAASQISGITPAALDILQIYIKMQKKKA"
     gene            complement(11480..11977)
                     /gene="cetB"
                     /locus_tag="RJ239_000866"
     CDS             complement(11480..11977)
                     /gene="cetB"
                     /locus_tag="RJ239_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bipartate energy taxis response protein CetB"
                     /protein_id="HDV7330995.1"
                     /translation="MSREIFLQEDSLITSKTDLKGKIVYANDDFLKYAGYTMGEVLNK
                     PHNIVRHEEMPKTVFKYLWDYMKEGKEIFAYVKNKTKDNNYYWVFANVTPSIDVNNNI
                     IGYYSVRRMPNKSAISTIESLYSDLLRAEQQQGLNKGVEMLKNFCKDADKTYNELIFS
                     LQEAK"
     gene            complement(11995..13377)
                     /gene="cetA"
                     /locus_tag="RJ239_000867"
     CDS             complement(11995..13377)
                     /gene="cetA"
                     /locus_tag="RJ239_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bipartate energy taxis response protein CetA"
                     /protein_id="HDV7330996.1"
                     /translation="MIKHGLLLTIFLSVIGVLGVIFIHIFVGAIIFVLIAVLMIYLLR
                     QHKDEQIMIDKLLVLCRELKEGNFDNRIIYVKTKKSKKLAEIADNLNNTIDGLEAYLR
                     EINTSISCSQKGEFYRKALPEGLKGIFAHNIEFINKALANIEVTARSTFKNALSRTLM
                     DLSLGNQNKDMSQISSSLNQDISMMKNVYDTVDAISHTATENGSEVDSLQSAMGSLMD
                     VVNSSKETVQTFVANSQNITSVVEVIRDIADQTNLLALNAAIEAARAGEHGRGFAVVA
                     DEVRKLAERTQRSTSEISIAIQTMQQDFVNIQSGSEQVFNIVSESEERINKFSQAFKR
                     LEENSSALGVNFGSFAKRLILSVVKIDHILYKSNIYLNLNGAQNFNLESVDPISNLCQ
                     DERAQGVINELSSETELNLAKEFIKDNAKKAIEESSQDYIDQKAYDAIVNDIKSLEQR
                     SAEILAKLKI"
     gene            complement(13482..13976)
                     /gene="cetC"
                     /locus_tag="RJ239_000868"
     CDS             complement(13482..13976)
                     /gene="cetC"
                     /locus_tag="RJ239_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy taxis response protein CetC"
                     /protein_id="HDV7330997.1"
                     /translation="MKEIVLSENALITSKTDLKGNIIYANNDFLKYAGYKVDELLYKS
                     HNIVRHEDMPRTVFKCLWDYIQKGDEIFAFVKNKAKDGNFYWVFANVSASFDTNGNII
                     NYYSVRRAPNRKSLSIIEEVYKILLEKEQKSGINAGVSALMDIVSSYKMTYNELIFNL
                     QENN"
     gene            14245..15621
                     /locus_tag="RJ239_000869"
     CDS             14245..15621
                     /locus_tag="RJ239_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HDV7330998.1"
                     /translation="METLSQTLAERKPPLYKRIIKSLGFWVIIGIITGIVLGYTDKEL
                     AIASKPGVDYFIGALKVLIGPIIFVTLVLGIISLESLKKVGSIGAKAVIYFEVVSTLA
                     LAIGIFMANVMQPGHGMNLDPSQLDTKSVQKYISQTTEVSASSEIMHILKDAMPTDII
                     TPFTEGKTIQVLVIAIITALIISLMRIEDKQAIQRVFEVVQNFVFKILQIIMYFSPIA
                     AFSAMAVLIAQYGIGSLINLAYLLLVMLISCLVFIFGILGLICYFAKVNIFKFMRFIS
                     REVLIVFATSSSESALAPLMRKLEKAGLSKATVGLVLPTGYSFNLDCTNIYLAMSLIF
                     LAQAFNVNLSLAHEISILIVLMIASKGAVGVTGSGFIVLGSTLAALGNMEISEANATL
                     AQVLPVAAIGVLLGVDKFMSEMRAVGNLCGNSVAALIVAIWDKQIDWEKFRYAMDNPE
                     KFHNAGMN"
     gene            complement(15618..16424)
                     /locus_tag="RJ239_000870"
     CDS             complement(15618..16424)
                     /locus_tag="RJ239_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter beta-barrel
                     domain-containing protein"
                     /protein_id="HDV7330999.1"
                     /translation="MRGIFYIIALFSLLNGDELTEALAKNNNQNSWEHFDYKNTKEAP
                     KIQEENVDFKSTFDSLLSKTLENNNGIDKTDGNLDFQNENVQVKNLSSLYEGENNSLL
                     FQKELFVAQNNYNYSGGLINRYEKDDFLFGVNGFIDKQKEQKDTKSFGTEFGYSKFIK
                     AYSNYYIPNEAEKNLQLGMSFVIPTYTAFAFDISKDNDKTNYQVSYSPYSVFSLNLLR
                     RDYSARETVDDTVVQVGFSFNFNESFLKQFRKKDNTLEEVNRYDFLQRTH"
     gene            16566..18092
                     /locus_tag="RJ239_000871"
     CDS             16566..18092
                     /locus_tag="RJ239_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HDV7331000.1"
                     /translation="MQKDNLIAFVIFIISTIAFVIWGFGYISQHQLILFILASIFGIF
                     MAFNIGGNDVANSFGTSVGAKTVTIKQALIIAAVFELSGAIFAGAEVTKTIRSGIVIF
                     PNSLDPMLFVIIMLAALLSSGVWIFIATKKGLPVSTTHSIVGGIVGASIMMGLLKFDG
                     IQTLSMVKWSEILRIAISWVASPLLGGIVAYIIYSYIDKKILKPSEKLNDDLKNIKKE
                     RKKFKEEYFLNLKTKSQEEQIKELSAIALDEEEQENNFYRNKMKEFKDQEKDIDIYSI
                     LKTHMPIIACIAAAIISAMFLFKGLNNVSTLDILQNFWIIGIIGTISYVVTFAIVKIV
                     KKTELNKTTDRIFSWFQIFTASSFAFSHGANDIANAIGPFAAILDVLKNGTINATSPV
                     PFAALAMFGVALVVGLWFLGKEVITTVGSKLATIRPTTGFSAELGASIVILLATQFGI
                     PVSSTHILIGAILGIGVYNKNANWIMMKPIGLAWIITLPAAGIMAALVFLGFKLSLGI
                     "
     gene            complement(18100..19278)
                     /locus_tag="RJ239_000872"
     CDS             complement(18100..19278)
                     /locus_tag="RJ239_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDV7331001.1"
                     /translation="MIIKNAKIYGDSLQDIEIKEGKITNIGSNLQGEEILDAKGMTLL
                     PSFVDLCVSLKNDKFSLANLELLENECLKGGISSIVLRDCMDFDEESFALFLQNLAQR
                     KMQIFSSVRVKDANGKLKNLATLLNKGACALELDSSLDANTLKVSSQYAFMKDSPIFV
                     RCYDKDFDDNGVMNDCEMSFELGLIGMSKIAETSQIAKMKELAKFYKNKVIFDLLSLK
                     DSLVLLDEKDLKLVSIHHLIKDDSACEDFNTAAKLMPPLRSKEDVLALREALKEGKIS
                     FLTSLHSAKSISLKDLAFDEAAFGIHSVCEFISLCYTFLIKEGFLNWQELCRFTSKNP
                     SEFLGLNSGVIEVGKEANLVLFDENEEIFAPKSSLYSEDKLFGKIKMHIIKGKNILEK
                     "
     gene            complement(19288..20184)
                     /locus_tag="RJ239_000873"
     CDS             complement(19288..20184)
                     /locus_tag="RJ239_000873"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HDV7331002.1"
                     /translation="MMRIAVIGAGKWGSALHLALKENHNCFISSLHQRDLEDFVSIKE
                     ALECEYLVFALSSQGMRAWLKENFINKGQKILIASKGIEDQSCQFLDEIFLDFVPKEN
                     FCVLSGPSFAAEVMQKLPTALIISGINQELCKKFASFFPDFIKTYIDNDVRGAEICGA
                     YKNVLAIASGISDGLKLGNNARAALISRGLIEMHRFGKFFGAKEETFLGLSGAGDLFL
                     TATSVLSRNYRVGLKLAQNQKLDSILVELNEVAEGVKTAYAIEKLAKMKGIYTPIVNE
                     VVAIFKGKSVQEATQSLLKQND"
     gene            complement(20181..21599)
                     /gene="gatB"
                     /locus_tag="RJ239_000874"
     CDS             complement(20181..21599)
                     /gene="gatB"
                     /locus_tag="RJ239_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HDV7331003.1"
                     /translation="MFEVVIGLEVHAQLNTKTKIFCSCATSFGEAPNTNVCPTCLALP
                     GALPVLNEEAVKKAIAFGKAVNATINKKSVFNRKNYFYPDLPKAYQISQFDIPIVEKG
                     ELFINVKGENKRIGITRAHLEEDAGKNIHESNFSKVDLNRAGTPLLEIVSEPELRSSD
                     EAVAYLKKLHSIIRFLDISDANMQEGSFRCDANVSIRPKGDTKLYTRVEIKNLNSFRF
                     IQKAIEYEVKRQSEAWEDGTYEQEVVQETRLFDTTNLVTRSMRGKEEAAEYRYFPDPD
                     LLPVLLKDEFLDIKIPELPDEKKVRFIDKLGIKESDAEVLISSLEMSRFFESLISQNL
                     NPKLCVNWLNTELMGLLKGELTIENSPVDAQKLGVLIKRIEDGTISAKAAKDVLAFVF
                     ENTSVEIDEAIEKLGLKQVSDDSAIEAVIEQILNANADKVAEYKSGKDKLFGFFVGQT
                     MKEGKGAFNPAKVNEILKTKLG"
     gene            21714..22208
                     /gene="luxS"
                     /locus_tag="RJ239_000875"
     CDS             21714..22208
                     /gene="luxS"
                     /locus_tag="RJ239_000875"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HDV7331004.1"
                     /translation="MPLLDSFKVDHTKMPAPAVRLAKVMKTPKGDDISVFDLRFCIPN
                     KDIMSEKGTHTLEHLFAGFMRDHLNSNSVEIIDISPMGCRTGFYMSLIGTPDEKSIAK
                     AWEAAMKDVLSVSDQSKIPELNIYQCGTCAMHSLDEAKQIAQKVLNLGISIINNKELK
                     LENA"
BASE COUNT         7692 a         4015 c         2867 g         7708 t
ORIGIN      
        1 ttgagtctgt tctttaattg cttcttgttc taaattgtca tgttctaaat tttgagtttc
       61 taaagttttg tttgaattat catcttgagc atcatcatca aaactcaaat cttccattcc
      121 ctctgaattt atatctaaag aattttcatc aggcaaatca tctaaattta aattatctaa
      181 atccaagctt atatcagcat aaggattttc atcattgctt aacattggca aatcaataga
      241 tgtatgcttg ttcgcatctt tattattaag taaatttaaa aaatctgtag gtaaaaaagg
      301 tttttgtaaa atttgcgcat ctatatcttc tacattttga tttcgcgggg ctaaaaaaat
      361 caatctatcg catttttctt taagaatttt taaaggtgct ggagtatcac tatctacaac
      421 aatcacatca taattaccca aattttcact ataagcatta agttcttcaa aatcataaga
      481 cattttttta gcactaaggc ttacaagtct tgaaactaca gggttttcat ttaaaagtaa
      541 aattttcatc actttaatcc ttaaaaaata atcgctattt tacgataatt tcatttatcc
      601 tttccttaga agaaaaaaag agtttgcata tgagtaaaaa gttctaaaat taaattttta
      661 aaatattgca tcataactag taaaatagca atcaaaacta caaaacctag agctatcttt
      721 ataggatagc caataactaa aagattaaat tgtggcattg ttttcatcaa aagtccaaaa
      781 ataacatcgg ctaaaagtga aattccaagt ataggaaagc tcatagtaaa acctatgatg
      841 aaaatattaa acatacccat atttaaataa tgcattaaat tctcatgcgg ataaaatcca
      901 cctaaactaa tataacccaa agaatgactt aaaaacaaaa gcattaaatg atggccatca
      961 aaagcaagaa aaaacatcaa agcaagtaaa tttaaaattt gagatgtgat aggcatactc
     1021 gttccagaac ttggatctaa tatacttgcc atagtaaatc ccatagtaaa agcaatctgc
     1081 tcacctgcca tcataataat aacaaaaata atttgaagca ttaatcctgc tatcattcca
     1141 aaaatcactt cactaataag ctgtaaaaca aaaaaactat ctaaatgcaa agattctaat
     1201 ctagccaaag gatataaata catagtcaaa aataaaacta tagtactttt tatcaccata
     1261 ggaatagaat tatgtgaaaa aaaaggaaaa aaaactataa gaccactcat tctagcaaga
     1321 agcaacataa aagttacaac atttttatca cctaaataat taacaaattc cattggcgtt
     1381 tatagtataa gttttatcac aaaaacttgc aagcttgcta tcgtgagtta caaaaaataa
     1441 agctgcatca ttttctttaa cataggaaat taaaagttcg ataacatttt tagcattatc
     1501 aaaatccaaa tttccagttg cttcatcagc aaaaataatc tttggttttt tacaaagcac
     1561 acgtgcgata ctcacacgct gttgttgtcc gccgctaagc tttcctattt tttgatgtaa
     1621 aagcgtatca atacctaacc tttttaaaat tttctcatct aaatcttgac ctgataaaac
     1681 actagcaagt tcgatatttt ctaaagccga aaaaccttta aaaagataat gtgtctgaaa
     1741 aataatacca aaatcataac ggcgaatttt taatctttcg ttttcatcta tctgataaag
     1801 actagaacct ttaaaaaaaa cttcaccttt ttttggaatc aataaagaag aaagtatatg
     1861 caaaagagta gatttaccac aaccgctact cccttgaata gcaatgcaat ctttggtatt
     1921 taaagtaaga tttaaaccct caaaaagcgg ataatcaaaa ctatggctta aattttccgc
     1981 tcttaagagt tccattttta accgttttta aagttgtgca gcaacttcag ccgcaaaatc
     2041 ttcagttttc ttttctaaac cttcgccaac ttcaaagcaa ataaattcaa caattttaat
     2101 ttttccacca aattcttttt ctttttcagc gatcacttgt tctacagttt ttttatcatc
     2161 cattacataa aactgaccca ttaaagtaag tttgctatcg agttgagaat tatcggctat
     2221 aaagctattc attttgcccg ggataatatt gtcccaaatt ttttcaggtt taccttgagc
     2281 tttaagttct tctttgattt tttcttcagc ttcttttaaa attgcatcac ttaattgttt
     2341 gcgacttgca aattgaggaa ttttatgttc aggtttattt ggatctttaa gtctgcgtct
     2401 ttcttcattt tctttttcaa gttcagcaac caaggctttg tattcatttt caacaaaagt
     2461 catatccaaa tcttcataac ttaaataact tggtctcatt gctgcaatat gcatacaaat
     2521 ttgtcttaac aaatctcttg attttgaagc cacttcagtg ctatcacaag ctgcagcgat
     2581 cacaacgccc acacggccat ttgtatggat ataaccattt acaacgccgt tagcacctgc
     2641 ttttaaagtt gcaaatcttc ttacaactag gttttctcct atagttgcaa tttgactttt
     2701 taaatattct tcaaatttta caccattaat cgtacttgag tgaagttctt ctacactttg
     2761 caagctattg ctttgaatat gagctgtagt gtcttttgtt aaagcaataa actgatcatt
     2821 ttttgccaca aaatctgttt cggaattaat ctcacttaca gttgcgcttg taaaatcatc
     2881 acttactttt acacttacta aaccttctgc agcaagtcta tctgcttttt tagcagcctt
     2941 acctaaacct ttttctctta aaagttgtac tgctttatca aaatctccat tagtttcact
     3001 caaagcattt ttacaatcca tcatccccgc gcctgtactt tcgcggagtt cttttaccat
     3061 tgcagcagta atttcagcca ttattcttgc tcctcaccga agtcttcttc gctcatcgct
     3121 tcatctaaaa cttctttttt ctcttcatcg gtgatttctt tttcttcatt tgctaaagct
     3181 tcgccatctt gttctcttaa agcttttcct tcattaatcg cttcagccat ttcttggcag
     3241 aaaagttgca ctgaacgaat tgcatcatca tttcctggaa taggataagt taccaagtca
     3301 ggatcacagt ttgtatctag tggagctaca acaggaattc ttaatctatt tgcttcttga
     3361 acagcaattt tttcttttac tgtgtcaata acaaaaatca tatcaggttg agttttcata
     3421 taacgaattc cacctaaata agctaataat ttttcttttt ttcttgtaag cattaaagct
     3481 tcttttttag ttaaaagttt aatacttcca tcttcttcca ttttttcaat tacttctaat
     3541 tttctaattg attggcgaat ggtaccaaaa tttgtcatca taccgccaag ccatctatga
     3601 tttacataag gcataccgca tttttcagcg tattctttaa tcgctccacc tgcttgtttt
     3661 tttgtcccga caaaaagtat agtttttcct tcggcagcag cgtcacgaac gatattatag
     3721 gtatatctaa aatatcttaa agttttttgt aaatcaatta cataaatacc ttttctctcg
     3781 ccaaaaatga attttttcat ctttggattc cagcgtcttg tttggtgtcc aaaatgcaca
     3841 ccgcattcta ataaatctct catactaacc atgagtttct ccttgtaaat ttagctttat
     3901 tcctccacat cccttaattt acacaagcta aaaaggattg atgcgtgtga aatgaagcta
     3961 atattttatc aaatttaagt ttagttttta cttatatatg tagtccttgg taaggcttag
     4021 attattattg atttcttttg tgattaaaaa ttgaaacaaa tccacgcttc caacacgaaa
     4081 agcagaggca caagaacgaa ggtataaatc ccacattctt ataaattctt catcatattt
     4141 ttcccttacc ttgtccaata ctttgttaaa attttcatcc cataaatcta aagtttttgc
     4201 atagtgcatt cttaaacttt ctgctaaaag aagatgaaaa tcccactcac tcatagcact
     4261 tacaacctct cttaaagaag gtaaatatcc tcctggaaaa atatatttat ctatccaagc
     4321 atttgttttt ccttcaaaca tggctaaaat agaatgtaaa agcatagaac ctccaggttt
     4381 taacacttgt tttactttca tgaaataaag tcctaaattc tctttgccta catgttcaaa
     4441 catacccaca gaaacaactt tatcaaaata attttcaaat tctaaatctt gataattttg
     4501 aagtcttatt tctattttat cttcaagacc aagttctttt actctttcct tagctttttt
     4561 acactgctcc tctgaaatag taattccaac aaccttaact ccatactttt gagccgccat
     4621 aatagaaagc caaccccagc cacaacctat atctaaaagc ttttctcctt cttttaaatc
     4681 aagtttttta agagtatgtt ctattttgtt aatttgagct tcataaagag tattattagg
     4741 ctctttaaaa taagcgcaag aatagctcat agtatcatca agccaaagct tataaaaatc
     4801 attacctata tcataatgac ttttgatatt tttactttcc tgtttttggg ctattttact
     4861 caagatatcc tctgtatttt ttaaaaaacg cttatttgaa aaataataca aaactttagc
     4921 tatttcatca taatcacctt ctatttctag tttagactcc atataatgtt ttgcaaaaac
     4981 taaactcgta tcactaaata attttaaaaa aggtattttt tctttgaaaa ttaaagaaaa
     5041 tttagcaggc tgattaccca catgaaattc ttcttgatcc caaaatacaa ttctaaaatt
     5101 tccataattc cattttgaaa gaataaattt aatcatttgt ttttcaagca tgacatactc
     5161 caactaataa aaattattat ttgatagtat ctcttaatta tgtttaaaat ttgataaaat
     5221 tgaagaaaag atagaatttt tgccacagat ataaaatagt ggcaaaaatt ttataatact
     5281 aatgtaattt agaccaaaca gaacgcttcc aacctatagc aaaaatactt aaaattacaa
     5341 agaatatcat tacataaatt cctgtagttt ttctttcttc ttttttgcta tcacccactt
     5401 gatcaatata agatacaacc ttagcctgtg cagcttctgt taaacctact cttggcatag
     5461 cggttcctgg aagaagtttt tgagtattat taataaaatc atgtaaatat tgctcaccac
     5521 gagatcttat catcatagaa agatcaggtg gaacagaacc taaataagtt tttaaatcat
     5581 tttgatttga tggagtaaaa aagctatcgt atttcatatc atgacaacgt ccgcaagcct
     5641 caataaaagt tgctttatct ttagcaaatt ttatatcttt ttccattaaa gctgcttttt
     5701 gagcactatt ttccatttta gcatattttg cctcaacatc tttcttaata gtagcatctt
     5761 cattggcttc aaatttaaca ctcacatctt taagataagc aattacattg gctatatttg
     5821 catttgtagc ttcttcactt tctcctgaag tatctttatt gtaagctgtc ataataaaag
     5881 catcaccaaa tttatgatct acttttaaag caagcgcagg atgcataatc aaagctgcta
     5941 aaaatttttc atcaaaaata gcaccagctg cactgagatc aggcggtatt actcccatag
     6001 aagaatcagt aatattagct gctattccat cttcttttac accatgacat gcaaaacagt
     6061 tattttcaaa aaattcttta cctttttttg catcaccctt agcaaaatcg atctttgcaa
     6121 catctgccca aagtgtttca accttgctta attcttcttt tgctttttca agttctttgt
     6181 ttgcactctc tattctttta gcatctcctg aagcttgtgc atcttttaga gctaattctt
     6241 tagcttcaac tatacctttt gcaaaagtag tatcttcaac agcaaaatca aaatttgcag
     6301 gagcaacatg aggcttcatc actgaatgag cataaggctc taccccccaa tatacaagtg
     6361 cagtaaaaac tactacaact aaaaatattt ttatttctct cattgtttag ctccttttct
     6421 ctccataata gtaataaccg gtaaaactac aataagtaaa agtaaaaata ctatagaagc
     6481 gtaaaatcct acccaagcat ttacacctgt tggaggtaat tttccataaa cagttaaaac
     6541 aattaaatca ataagcaata tccaaaacca aatgaaaaat aaaggtcttt catgagctgg
     6601 ttttaccaca tcacttctat caagccaagg aagcaagaag aaaatcactt gagcaatacc
     6661 aaatgcagcc aaacctatat caaaagcttt aatacttgca atatcaaaga aaaatcctct
     6721 taaaacttca taactccata agaaatacca ctcaggataa atatgagctg gtgttttaag
     6781 cgcattagct ggatcaaaat taattggatc cattgcaaat tcaaatttaa aacagaccaa
     6841 ataaaagaag aaaatcataa aaaagcttat atacataaaa tcttttgata aaaatcctgg
     6901 ccaaaaagga atcactttag aaccctttgt gtcacctgcc atgtattttt cagcctctaa
     6961 atcaaagtca agttcttcag aaatttcatt attaacatga ggaattctta aagaatagaa
     7021 gtgaaatgct ataatagcaa tgataactat aggaagcaag cacacatgaa gcataaaaaa
     7081 tcttgttaaa gttggatcag aaaccgcata atctccacga atccaaatca caagctcagg
     7141 gccaataaat ggtatccctc caaaaagatt agtgattact tgagctgccc aataactcat
     7201 ttgtccccaa ggaagcatat acccactaaa agcttcagca gaaaatacaa caaacaaaag
     7261 cataccgcta acccaaatca tctcacgacc ttttttataa gaaccgtaat aaattcctgt
     7321 tagcatatgt atgtatataa tcaaaaatac aacagaagcg gcaacaccat gcatgtgacg
     7381 ccaaagccat ccatagtcca cctcttgcat aatagtctta ttcacactat caaaagcaag
     7441 tgcagtatct ggtttataat acatcacaag taaaagtcct gtaacaaaaa gcactgcaaa
     7501 aagagtggtt aaaataaccc ccattgccca aagaaagtta atttgctttg gtatccaata
     7561 ctttaccatt aaaacatcaa gcagtttatg taccgcaagt ctttgatcaa gccaatctac
     7621 aagaccatta gcttttctaa tttgtgccat cttaagcctc cgctatcatt tttttatatt
     7681 caggaccctc ttcacctaaa acaagcttgg ttccatcaat tttaaaagga ggaatttcaa
     7741 gaggctttgg aggaggtcca aagacatttt ttccacttgt gtcaaattct ccaccatgac
     7801 aggcgcattt aaacaattgc tcacttggtt ggtaagcagg tatacaaccc aaatgcgtac
     7861 aaagtcctat aaccacagta taagctgcgt tatctaccac aacatcacgt ttttcatctt
     7921 ttggcatact cgcatctttt tttaatataa aaataggctt tttacgccat tctatagttc
     7981 taagctcccc atcttgcatt cctgataaat ctactgtagt aaaacctgca gctttaacac
     8041 ttggaagcgg atcccaagtt tttttcatcg caacaagtga gaaaacaccg cctacagcag
     8101 ctacgcttcc aaatgcaaag cccataaagc ttcgtctact ctcagatgta gccataactt
     8161 gctcctttcg attttatttt ttaaccaagt taaaagttta tcgaaattaa aataaatttt
     8221 ttctttgttt aacaagtttt gatatttaga caataagagc aaaaagagaa aaaacaagca
     8281 caggtaaagt tatcaaaaag ccaaatttac aatattgcca aaaagaaata ttaatgcctt
     8341 ttctagccaa aactccaagc caaagcaaag ttgctaaaga acctattggc gtaagttttg
     8401 gacctatatt tacacctaaa agatgtgcat aaatcatcaa agaatcaaaa gaaaaattct
     8461 caaaatattc ttttaatgcc aaatctccga ttaaaaccat aggcaaatta ttaaacacag
     8521 aagatccaaa agctgaaatc aaggccacac caaaaattcc actcttatct tgcatcaaaa
     8581 aagcatagct tttaaccaaa atttcactca cacctatttt atgtaaagca aaaaccacca
     8641 tataaagccc aaaactaaaa agcaaaactc cataaggtgc ttcaaaaaga attttaatac
     8701 tttttttacc ttgaattttt aaaataataa gccaaaaaat tcccgcccaa agcaaagcaa
     8761 aaaaacttat tttaatatta aaaatttcac ctataaaaaa actgataaca aaaagaaata
     8821 aaaatactat gcaaagaaaa aacaatttca atgaaatttg ctcttttttg attaatttaa
     8881 attcaagcct tttaggtaaa actctcacat aaagcacaaa aaccgtaact atagtagaaa
     8941 gcaaaacaaa aaaatttggc aaaaacatat ttttagcaaa ttctaaaaat tctatcttaa
     9001 aataatttgc tgtgatgata ttggttaaat ttgaaataac caaagcgttt gaacttgcat
     9061 cacataaaaa agaaagacta agtaaaaaag aacttaaaat aaaagcatga tttttacaat
     9121 ctttaagagt tgaaaataaa gctataataa taggtgtaat gattaaaatc gctccatcgt
     9181 tagcaaaaaa tgcagaaaga aaaaatacaa aaatcaacaa aaataacatc aatttttttg
     9241 tactgatata aattttttct tgatttttct ctctagaaaa atgcaaaatt ttactcgcaa
     9301 taaaatcaaa aaatcccaaa gcttccaagc taaaagaaag gataatcaac ccaaccaaag
     9361 ttaaagaact atcccaaacc aaagaaaaaa caaaacaaac atctttaaaa tctaccaatt
     9421 gaaaaataaa aacaaaaaaa gcccccaagc tagaaaatac ccaaataggt aaattccatg
     9481 gacgccaaaa aagtaaaact aaagtagata aaaaaataaa aaaagcaagc atttaagctt
     9541 ttttcttttg cattttgata taaatttgta aaatatctaa cgctgcagga gtgattccac
     9601 tgatttgact tgcagcaaaa atggttggag gtttatgatg attaagtttt tctacaacct
     9661 cattactcaa accacttaca cttttaaaat caaaattttc aggaatttta agctcactaa
     9721 gatttttcat tttttctact tgagcttttt gcatactaat gtaatgataa tactttgcct
     9781 catttaaaat ttctcttaaa gaataattat ccatgatttc aaatataggg tcaagttttt
     9841 ttaatttttc tatatcaaaa cttgctcttg caacaatttt ttgaagattg actatagaag
     9901 aaattttatc ttctcctaaa ctctctaaaa aagcattatt ttggttatta ggcgtaaatt
     9961 ctttagaaag taaaaattca agtccttttt gaagattgtt tgcaatattt tgtatataag
    10021 taaaatcttg ctcgcttaaa agccctaaat catagccata ttttccaagt ctaagtatag
    10081 cattttcttc ccttaaaagc agtctaaatt ccgctcttga agtaaacatt ctataaggtt
    10141 cttttgtgcc ttttactacc aaatcatcga ttaaaactcc tatataagct tcatcacgcc
    10201 ttaaaatcaa aggctctttc atatctatgc ttaagcttgc attgattccc gccataaagc
    10261 cttgtgctgc agcctcttca taacctgtag ttccattaat ctgtcctgca caataaagat
    10321 ttttaatctt tttaagttct aaagtatgct taagttcagt tggctctata tagtcatatt
    10381 ctatagcata accaaaacgg gttattttag cattttcaaa accctttaca gaacgcagca
    10441 tttgaatttg tacctcataa ggcaaagaag tagaaaaacc gttgatataa tactccgtcg
    10501 catcgatagt ttgaggctct ataaaaagat gatggctttc tttgtcgcta aaacgattga
    10561 tcttatcttc tatagaagga caataccttg gccccacacc ttcaatctgt cctgtaaaaa
    10621 gcggggcacg ataaaaatta ttcttaataa tctcatgtgt agttgtatta gtgcgtgcga
    10681 tataacaagg aagttgagta ggattgaaat ttcttgaacg aaaactaaaa gctttaggat
    10741 ttacatcacc atcttgaatt tcaagcacgc taaaatcaat gctttttgca tccactcttg
    10801 ggcaagttcc tgtttttaaa cgtcccattt ttaaacccaa agtttgcaga taatttccta
    10861 aatttaccga agcaagctcc cctacccttc ctgcttgaag tttgttttca cctacatgaa
    10921 taagtccatt taaaaaagtt cctgttgtaa gtatcacttt tttggcaaaa tatgtgtttt
    10981 ctaaatttgt tttcacgcct ttaacttcat cattttctac aattaaagca ctcgcttgtt
    11041 cttgagaaat ttctaaattt gaaagtttta aaagtttatt acgtgtaatg atacggtatt
    11101 tatccatatc aatttgtgcc ctacttcctt gaacggctac acccttactt tcatttaaaa
    11161 tgcgaaattg tatccctgct tcatcggtga tttcacccat aagaccaccc atggcatcaa
    11221 gttcttttac caaatgtcct tttgcaagtc cacctatggc tggattacaa cttgccgctc
    11281 ctatttgctc aatcaatgta gttaaaagta aggttttttt acccattcta gcagcagcag
    11341 cacttgcttc aacacctgca tgtccaccac ctataacaat gacatcaaac atattttgcc
    11401 ttgaaaaatg tgaattttta aaagaaagat tatataatat ttagacttaa aacaaactcg
    11461 ttttaagtct aacaaaaatt tatttagctt cttggagaga aaagattagc tcattataag
    11521 ttttatctgc atctttgcag aaatttttaa gcatctcaac acccttattt aagccttgtt
    11581 gctgttctgc tcttaaaaga tcgctataaa gactttctat tgtagaaata gcgcttttat
    11641 ttggcatacg acgaacggaa taatagccta tgatattatt attaacatct attgatgggg
    11701 ttacatttgc aaaaacccaa tagtaattgt tatctttggt tttatttttt acgtaagcaa
    11761 aaatttcttt gccttctttc atataatccc ataaatattt aaaaacagtt tttggcatct
    11821 cttcatgtct tactatgtta tgaggtttat ttaaaacttc acccatggta taacctgcat
    11881 actttaaaaa atcatcattt gcataaacta ttttaccttt taaatctgtt ttagaagtaa
    11941 ttaaactatc ttcttgtaaa aaaatttctc ttgacatttt cccaccctct taatttatat
    12001 ttttaatttt gctaagattt cagcacttct ttgctctagt gatttaatat catttacaat
    12061 cgcatcataa gctttttgat cgatataatc ttgacttgat tcttctattg cttttttagc
    12121 gttatctttt ataaattctt tagctaaatt taactcagtt tcagaactaa gctcattaat
    12181 aacaccttga gctctctcat cttgacaaag attagaaatt ggatctacac tttcaagatt
    12241 gaaattttga gccccattta aatttaaata tatatttgat ttataaagaa tatgatcgat
    12301 tttaaccaca gacaaaatca atctctttgc aaaggatcca aaattaacac caagagcact
    12361 actattttct tctagacgtt taaaagcttg agaaaattta ttaattcttt cttcagattc
    12421 actaacaatg ttaaaaactt gctcactgcc actttggata tttacaaaat cttgttgcat
    12481 agtctgaatt gcaatagaaa tttcgcttgt agatctttga gttctttctg ctaactttct
    12541 aacttcatca gccacaaccg caaagcccct accatgctct cctgcacgcg cagcttctat
    12601 ggcagcgtta agagctaaaa gattggtttg atcggctata tcgcgtatta cttcaaccac
    12661 tgaagtgata ttttgtgaat tagccacaaa agtttgtact gtctccttgc tcgaatttac
    12721 aacatccatt aaagaaccca tagcactttg aagagaatcc acctctgaac cattttctgt
    12781 agctgtatga gaaatggcat ccactgtatc atatacattt ttcatcatgc taatatcttg
    12841 atttaatgag ctagaaattt gagacatgtc tttattttga tttccaaggc ttaaatccat
    12901 taaagttctt gataaagcat ttttaaaagt agatcttgct gtcacttcta tgtttgctaa
    12961 agctttattt ataaattcga tattatgagc aaaaattcct tttaaacctt caggcaaagc
    13021 cttacgataa aattcacctt tttgagaaca tgaaatagaa gtattaattt cccttaagta
    13081 agcttctagc ccatcaatag tattattaag attatctgct atttcggcta attttttgct
    13141 tttttttgtt tttacataga tgattctatt gtcgaaatta ccctccttta actctctaca
    13201 aagaaccaaa agtttatcta tcattatttg ctcatctttg tgttgtctaa gcaaataaat
    13261 cattaaaaca gcgattaaaa caaaaattat cgctccaaca aaaatatgaa taaaaatgac
    13321 acctaaaaca ccgataacac ttagaaaaat agttaacaat aatccatgtt ttatcataaa
    13381 tttacccctt tttattgaaa attttttgaa gtcataaatc aaaacaatgc tttaacttct
    13441 aggtgaaaat tatacaataa aaaagataaa atatatctta tttaattatt ttcttgtaag
    13501 ttaaaaataa gttcattata agtcatttta taagaactta caatatccat taaagctgaa
    13561 actccagcat taatgcccga tttttgctct ttttcaagta aaattttata aacttcttca
    13621 attatagaaa gagattttct attaggtgca cgacgaacag aataataatt gatgatattt
    13681 ccattagtat caaatgaagc acttacattt gcaaaaaccc agtaaaaatt accatctttg
    13741 gctttatttt tcacaaatgc aaaaatttca tctccttttt gaatataatc ccaaagacat
    13801 ttaaatacag tgcgtggcat atcttcatgt cttactatat tatgagattt atacaaaagt
    13861 tcatcaactt tataacctgc gtattttaaa aagtcattat tggcataaat gatattcccc
    13921 ttaagatctg ttttagaagt aattaaagca ttttcagaca aaactatttc tttcataatt
    13981 taaaacatcc caataaaaca aataaatcaa aaatagaatt attaccaata acaaacaaca
    14041 aaaagcaaac tgaattgcaa aattataaaa ttttcaaaaa tattttaaat tttataatgc
    14101 aaataatgag aaattttgta acgtttatat aaaaaattat catatcatat aaaagaaagt
    14161 atttctagat ttgttttttt gttaaaattt acgatacaca ttgttaaaat tatattttac
    14221 aaagatcaaa aggagtgaat aaacttggaa actttaagtc aaactttagc tgaaagaaaa
    14281 ccgcctttat ataaacgtat tatcaaaagt cttggatttt gggtgattat aggcattatt
    14341 acaggtattg tacttggcta tacagataaa gaattagcca ttgctagcaa accaggagtt
    14401 gattatttta taggtgcttt aaaggttctt ataggcccta ttatttttgt tactttggtt
    14461 ttgggcatca ttagtcttga aagtttaaaa aaagtaggta gcattggtgc taaagcggtt
    14521 atttactttg aagttgtaag tactttagca cttgctatag gtatttttat ggcaaatgtt
    14581 atgcaaccag gccatggaat gaatcttgat ccaagtcaac ttgatacaaa aagcgttcaa
    14641 aaatacattt ctcaaaccac agaagtaagt gcgagctctg agattatgca tattttaaaa
    14701 gatgctatgc ctactgatat tatcacacct tttacagaag gaaaaaccat acaagtttta
    14761 gttattgcta taattactgc tttgattatt tctttaatga gaatagaaga caaacaggca
    14821 attcaaagag tttttgaagt ggtacaaaat tttgttttta aaattctaca aatcattatg
    14881 tattttagtc ctattgccgc cttttcagca atggctgtac tcatagctca atacggaatt
    14941 ggctctttga tcaacttagc atatttactt ttagtaatgc tgatttcatg tcttgttttt
    15001 atatttggaa tcttaggtct gatttgttat tttgcaaaag taaatatctt caaatttatg
    15061 agatttatct caagagaagt attgatcgtt tttgcaacca gttcaagcga gtctgcactt
    15121 gctcctttaa tgagaaaact agaaaaagca ggactttcta aagcaacagt cggacttgtt
    15181 ttaccaacgg gatatagttt taatcttgat tgtacaaata tttatctagc tatgagctta
    15241 atctttctag cacaagcttt caatgtaaat ttaagtttag cacacgaaat cagtatttta
    15301 atagtattaa tgatagcctc aaaaggtgca gtaggtgtaa ctggatcagg ttttatagtg
    15361 cttggaagta cgcttgcagc tctaggaaat atggaaattt cagaagcaaa tgcaacctta
    15421 gcacaagttc taccagtagc tgctataggt gttcttttag gtgttgacaa atttatgtct
    15481 gaaatgaggg cggttggaaa tctttgtgga aattcagtag cagctttaat cgttgctatc
    15541 tgggataaac aaattgattg ggaaaaattc cgctacgcta tggacaatcc agaaaaattt
    15601 cataatgctg gaatgaacta atgagttctt tggaggaaat catatcgatt aacctcctct
    15661 aaagtattat ctttttttct aaattgcttt aaaaaacttt cattgaaatt aaaactaaat
    15721 ccaacttgaa caacagtatc atcaacagtc tctcttgcac tataatcacg acgcaataaa
    15781 tttaaactaa atacactata aggagagtaa gatacttgat aattagtttt atcattatcc
    15841 ttacttatat caaaagcaaa agcggtataa gttggaatta caaaactcat tccaagctgt
    15901 aaattttttt ctgcttcatt gggtatataa taattactat aagcctttat aaatttacta
    15961 taaccaaact ctgtaccaaa gcttttagta tctttttgtt ccttttgttt atcaataaaa
    16021 ccattaactc caaataaaaa atcatctttt tcataacgat tgattaaacc ccctgagtaa
    16081 ttataattat tttgagccac aaaaagttct ttttgaaaaa gcaaagaatt attctccccc
    16141 tcataaagag aacttaaatt tttaacctgc acattttcat tttgaaaatc taaattccca
    16201 tctgttttat ctataccatt attattttct aaagtttttg aaagtaagct atcaaaagtg
    16261 cttttaaaat ccacattctc ttcttgaatt tttggagctt ctttggtatt tttataatca
    16321 aagtgctccc aagaattttg attattattt tttgctaaag cctctgtaag ttcatcgcca
    16381 ttgagtaaag aaaacaatgc tattatataa aaaatacccc tcattattct tatattcctt
    16441 attatttctt gtttaagtat ttattataaa aaaataatat aaataaaaat tccacaaaga
    16501 ctaaaaaata aaattagcaa atttaaagta aataagtgta taattaaaat aaaaaagggt
    16561 tattaatgca aaaagacaac ctcatagctt ttgttatttt tattatcagt actatcgcat
    16621 ttgttatttg gggatttggt tatatttcgc aacatcaatt gattcttttt attcttgctt
    16681 ctatatttgg catttttatg gcatttaata taggtggaaa tgatgtagcc aattcttttg
    16741 gaacaagcgt tggcgcaaaa acagtaacca ttaaacaagc tttaattata gcagctgttt
    16801 ttgagctaag cggggcaatc ttcgcaggcg cagaagttac taagaccata cgcagcggta
    16861 ttgttatttt tccaaattct ttagatccta tgctttttgt tatcattatg cttgctgcac
    16921 ttttaagctc tggggtttgg atttttattg caaccaagaa aggcttacct gtatcaacca
    16981 cacacagtat agttggtggg attgtaggtg ctagcattat gatggggctt ttaaaatttg
    17041 atggaatcca aacactctct atggttaaat ggagtgaaat tttaagaata gctatttctt
    17101 gggtagcttc gcctctttta gggggtattg tagcttatat tatttattca tatattgata
    17161 agaaaatttt aaaaccatca gaaaaactaa atgatgattt gaaaaatatc aaaaaagaaa
    17221 gaaaaaaatt caaagaagaa tattttttaa atttaaaaac aaaatcccaa gaagaacaaa
    17281 tcaaagaact ttccgctata gctttggatg aagaagaaca agaaaataat ttctatagaa
    17341 ataaaatgaa ggaatttaag gatcaagaaa aagatataga tatttactct attttaaaaa
    17401 ctcatatgcc aatcattgct tgtattgctg ctgctatcat ttcggcaatg tttttattta
    17461 aaggtttaaa taatgttagc actttggata ttttacaaaa cttttggatt atcggaatta
    17521 taggaactat aagttatgtt gtaacatttg ctatagtcaa aatcgttaaa aaaacagaac
    17581 ttaataaaac tactgataga attttctcat ggtttcaaat atttacagcc tctagttttg
    17641 cattttcaca cggagccaat gatatagcca atgctatagg tccttttgca gcgattttag
    17701 atgtcttaaa aaacggtaca attaacgcga cttctcctgt accttttgca gctttagcta
    17761 tgtttggagt tgctctagtt gtagggcttt ggtttttagg taaagaagtg attactacag
    17821 tgggttcaaa acttgcaacc atacgcccta ctactggatt ttctgcagaa cttggtgcaa
    17881 gcatagttat actcttagct acacaatttg gaattcctgt tagctccacc catatactca
    17941 taggtgctat attgggtata ggagtgtata ataaaaacgc aaattggatt atgatgaagc
    18001 ctataggatt ggcttggatt atcactttac cagccgctgg tattatggca gcacttgtat
    18061 ttttaggatt taaactatct ttaggaattt aagtaaagct tatttttcta aaatattttt
    18121 tcctttaatt atatgcattt taatctttcc aaaaagttta tcctcagaat aaagagaact
    18181 ttttggagca aaaatttctt cattctcatc aaaaagaact agattagctt ctttgccaac
    18241 ttctataact ccactattta aacctaaaaa ttcactagga tttttacttg taaatcgaca
    18301 aagctcttgc caatttaaaa atccttcttt gattaaaaaa gtataacaaa gacttataaa
    18361 ttcgcatacg ctatgaattc caaaagccgc ttcatcaaaa gctaaatctt ttaaagaaat
    18421 tgattttgca ctatgcaggg aagttaaaaa gctaatcttt ccttctttta aagcctctct
    18481 taaagccaaa acatcttctt tgcttcttaa aggtggcata agtttcgcag ccgtattaaa
    18541 atcttcacaa gcactatcat ctttgataag atgatgaatg cttacaagtt ttaaatcctt
    18601 ttcatctaat aatactaaag aatctttcaa acttaaaaga tcaaaaataa ctttattttt
    18661 ataaaattta gccaattctt tcattttagc tatctggcta gtttcagcga ttttactcat
    18721 gcctataagc cctagctcaa aactcatttc acaatcattc atcactccat tatcatcaaa
    18781 atccttatca taacaacgca caaaaattgg agagtctttc ataaaagcat attgtgaact
    18841 tacttttaaa gtatttgcat ctaaagagct gtcaagttct agagcacaag cacctttatt
    18901 taaaagagtg gctaaatttt taagcttgcc gtttgcatcc ttaacccgca cacttgaaaa
    18961 aatttgcatc tttctttgag ctaaattttg taaaaataaa gcaaaacttt cttcatcaaa
    19021 atccatgcaa tcacgcaaaa ctatactaga aattcctcct tttagacact cattttctaa
    19081 aagctctaaa ttagctaaag aaaatttatc gttttttaaa ctcacacaca aatccacaaa
    19141 agatggaagt aaagtcatac ctttagcatc taaaatttct tcgccttgta aattagaacc
    19201 aatattggta atttttcctt ctttaatctc tatatcttgt aaagaatctc cataaatttt
    19261 tgcattttta attatcatga tttttcctta atcattttgc tttaataaac tctgcgttgc
    19321 ttcttgcacg cttttaccct taaaaattgc cactacttca tttacaatag gtgtataaat
    19381 tcctttcatt tttgctagtt tttctatagc ataagcagtt tttacacctt ctgctacttc
    19441 attaagttcg actaaaatac tatctaattt ttgattttgc gccagtttta aacctactct
    19501 ataatttctt gataaaacac tcgttgcagt taaaaacaaa tcccctgccc cacttaaccc
    19561 taaaaaagtt tcttctttag caccaaaaaa tttaccaaaa cgatgcattt ctataagccc
    19621 tcttgaaatc agtgccgctc ttgcattatt gccaagtttt aacccatcac taatcccact
    19681 tgcaattgct aaaacattct tataagcacc acaaatttca gcaccacgaa catcattatc
    19741 aatataagtt ttaataaaat cagggaaaaa acttgcaaat tttttacaaa gctcttgatt
    19801 tatcccgcta attatcaaag cagtaggaag tttttgcatt acttcagcag caaaagaagg
    19861 accgcttaaa acacaaaaat tttcttttgg tacaaaatct aaaaaaattt catctaaaaa
    19921 ttgacaactt tgatcttcta taccttttga agcaattaaa attttttgcc ccttgttgat
    19981 gaaattttct ttaagccaag cacgcatccc ttgagaactt aaagcaaaaa caagatattc
    20041 acattctaaa gcttctttta tgctaacaaa atcttctaaa tcacgctgat gcaaagaact
    20101 gataaaacaa ttgtgatttt cttttaaggc tagatgtaaa gcactgcccc attttcccgc
    20161 accaataacc gctatacgca tcaaccaagc tttgttttta aaatttcatt tacttttgca
    20221 ggattaaaag ctcctttgcc ttctttcatt gtttgaccca caaaaaatcc aaaaagcttg
    20281 tctttaccac ttttatactc tgcaacctta tcggcatttg catttaaaat ttgttcaatc
    20341 accgcttcta tggctgaatc atcacttact tgcttaagtc ctagcttttc tatagcttca
    20401 tcaatttcca cgctagtatt ttcaaataca aaagctaaga catctttagc cgcttttgca
    20461 ctgatagtgc catcttctat gcgtttaatt aaaactccaa gcttttgagc atctacagga
    20521 gaattttcta tagtcaattc tccttttaaa agtcccataa gttcagtatt taaccaattt
    20581 acgcaaagtt taggatttaa attttgagaa ataagacttt caaaaaaacg actcatttct
    20641 aaagaactga ttaaaacctc tgcatcactt tcttttatac caagcttgtc tataaagcgt
    20701 actttcttct catcaggaag ctcagggatt ttaatatcca aaaactcatc ttttaataaa
    20761 acaggcaata aatcaggatc aggaaaatag cgatattctg ccgcttcttc tttgccacgc
    20821 atacttcttg taactaaatt tgtcgtatca aaaagtctag tttcttgaac tacttcttgt
    20881 tcgtaagttc catcttccca agcctcactt tgtcttttta cctcatattc tatagctttt
    20941 tggataaaac gaaaagaatt aagattttta atctctactc tagtataaag ttttgtatcg
    21001 cccttaggtc ttatactaac atttgcatcg catctaaaac ttccttcttg catatttgca
    21061 tctgaaatgt ctaaaaagcg tataatagaa tgaagttttt taagataagc tactgcctca
    21121 tcgctacttc taagctcagg ctcactgaca atctcaagca aaggagttcc tgcacgattt
    21181 aaatctactt tagaaaaatt actttcatgg atatttttac ctgcatcttc ttccaagtgc
    21241 gctcttgtaa tacctatgcg tttattttca ccctttacat tgataaaaag ctcacccttt
    21301 tctactatag ggatatcaaa ttgtgaaatt tgataagcct taggtaaatc tggataaaaa
    21361 taattcttac gattaaaaac acttttttta ttaattgttg cattgacagc ttttccaaaa
    21421 gctatagctt tttttacagc ctcttcattt aaaacaggca aagctcctgg taaggccaaa
    21481 caagtgggac aaacattggt atttggagct tctccaaaag aagttgcaca tgagcaaaag
    21541 atttttgttt ttgtatttaa ctgagcatga acttcaagac ctataactac ttcaaacata
    21601 aaatttcctt gaatttttaa atgttttatt ttatcttttt ttcttttaga aaggctttaa
    21661 atattaactt taaatgctat aattcttaga caatttatat ttaaggagtt aaaatgccat
    21721 tattagacag ctttaaagtt gaccatacta aaatgccagc tcctgctgtg cgtttagcta
    21781 aagttatgaa aacacctaag ggtgatgata ttagcgtatt tgatttgcgt ttttgcatac
    21841 caaataaaga cattatgagc gaaaaaggta ctcatacctt agaacattta ttcgcaggat
    21901 ttatgagaga tcatcttaat tcaaattcag ttgaaattat tgatatttca cctatgggtt
    21961 gtcgcacggg tttttatatg agtttaattg gaacacctga tgagaaaagt attgcaaaag
    22021 cttgggaagc agccatgaaa gatgttttaa gcgtaagcga tcaaagcaaa attcctgaac
    22081 ttaatatcta ccaatgcgga acttgcgcaa tgcattcttt agatgaagcc aaacaaattg
    22141 cccaaaaagt tttaaatcta ggtattagca taataaataa caaagaatta aaactcgaga
    22201 atgcttaaaa agaatcttta ttttttaaat gattaagctt taattaatat atttttatat
    22261 atgattttga aattttatta tt
//
LOCUS       DAPIVO010000026        22169 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.026, whole genome shotgun sequence.
ACCESSION   DAPIVO010000026 DAPIVO010000000
VERSION     DAPIVO010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22169)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22169)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22169
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.026"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..140
                     /locus_tag="RJ239_000876"
     CDS             <1..140
                     /locus_tag="RJ239_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HDV7331005.1"
                     /translation="SKNFYPINLCFKPIFLAEKQLCFLYIPYKNKSFYLIKIIFKRTN
                     Q"
     gene            137..1723
                     /gene="yidC"
                     /locus_tag="RJ239_000877"
     CDS             137..1723
                     /gene="yidC"
                     /locus_tag="RJ239_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HDV7331006.1"
                     /translation="MNNSNNIFQQKRILLAVVISFLFFVIYDYFFIPKQPLKIEQNIT
                     QKNQQNTSINNTPNIQNATTNTPSAALVSQDSVISKVQSKHFEAQIDSFGRISAFYLK
                     DRKYQNEKGEFINLVSKENSPYPLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQV
                     LKLTQNLSGLKIEKDITFYPKGNYEIEVKLSKNANYFISPGYRPNIAVDSYTVHGALV
                     MDNKETIETYKDGDVEKDESANNVVMTSAFDRYYATFFYNFDKPLNVAISKDANQNPI
                     VFAYSDNEFKAGGYIGSKEHVILRSIDPRLEAVVEYGWFTFIAKPMFEFLNFLHQYIG
                     NWGWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKGDPQKMNMHMME
                     LYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYFILP
                     ILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLV
                     QQWVINKIFAKEHHKKTSGA"
     gene            1727..2545
                     /locus_tag="RJ239_000878"
     CDS             1727..2545
                     /locus_tag="RJ239_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Jag N-terminal domain-containing protein"
                     /protein_id="HDV7331007.1"
                     /translation="MKIEAIDLQSALTEASRSLECSVMDLEYEIIQHPRKGFFGFGRK
                     KAIIEAKAKKRILKKNPKKEFTSSKNHKPETHEPKQENKIEIKNEKNKSQKEKYTVKS
                     DEIFDSFHRESKGVRNTQDILDEIRIQLVKLLESSQFKIELSELRMYDEDCVLIRLDG
                     EDAALMIGKEAHRYKAISYLLHNWINLKYNLLVRLEIAQFLENQIQGMQLYLQSVIEK
                     IKIHGRGQTKPLDGVLIKIALEQLRAEFPDKYVGIKQNNDQRFVVINDFFKKDE"
     gene            2538..3866
                     /gene="mnmE"
                     /locus_tag="RJ239_000879"
     CDS             2538..3866
                     /gene="mnmE"
                     /locus_tag="RJ239_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HDV7331008.1"
                     /translation="MSDTIAAIATAHGVGSISIVRLSGERALEFALKLSHKTKLTPRH
                     ATFTKLFNQNNEIIDEAIMIYFKAPYSFTGEDIVEFQTHGGFSVSEVLLEELVSLGAR
                     LALAGEFSKRACLNGKMTPLKALNIQDLILSKSALAAKIIARNMQGNLGELLEKIRTD
                     LVKTLAFVETSIDYADDDLPSDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIA
                     IVGKPNVGKSSLLNALLSYERAIVSDIAGTTRDTIEENFKLGTHLLRIIDTAGIRESK
                     DVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDL
                     ENVFKNTQNKNFIKLSAQKDITLLKEELQNYLNSFDSEGIMVSSLDLINACKISSEAI
                     FRAKGLLEESSLEFFAFELNLAINELARFTKDFQRDEILDEMFGNFCLGK"
     gene            3877..6063
                     /gene="purL"
                     /locus_tag="RJ239_000880"
     CDS             3877..6063
                     /gene="purL"
                     /locus_tag="RJ239_000880"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HDV7331009.1"
                     /translation="MDKETIKAHKISDEEYAQILEILGREPNLLELGVISAMWSEHCS
                     YKSSKKYLNGFPTKAPWVIQGPGENAGVIDIGQGMAAVFKVESHNHPSFIEPFAGAAT
                     GVGGILRDVFTMGARVVAGLNSLKFGDIHDEKCGKHQKYLVKGVVNGISHYGNCMGVP
                     TIGGECAFDECFNGNILVNAFALGVCKSEDIFYAKAEGVGNPVIYVGSKTGRDGLGGA
                     VMASDSFNEESKSLRPTVQIGDPFSEKLLMEACLELFKTDYIVGIQDMGAAGLTSSSF
                     EMAGRSGSGMKLYLDKTPMRESGMTPYELMLSESQERMLICAKKGYEDKVIEIFKKWD
                     LDAVVMGEVTNTGKMELFWHDELVGLIPIEPLSEKAPILSRPTSEPKYLSEIKNYKFE
                     LKSSVQELFIQMLQNENINNKAFIYDQFDSSVQTNTIKADGRLGASVIRIKENGASVA
                     MAIECNSRLNYVNSKIGAALAVASAGRKVACTGAKPLAISDCLNYGNPQNPEVMWQFA
                     QGCEGIKEACKELNTPVVSGNVSLYNETEGVSIYPSPTIVSVGVLEDANKTLKASFEK
                     ENLSVYLLGESLGEFSGSMVMKIQDKKVSGSLKELDYKAELALWDLLYKANQNSLLEC
                     ANSVGIGGIAMTLAKMFAISSVGANLTSDFDDEKMIFDESASRAIIGLSKENEEAFLN
                     LAKEFGVKAYKLGVSTSQKHFKLDSIELSKAELDKLYFESFKEQIQ"
     gene            6060..6830
                     /locus_tag="RJ239_000881"
     CDS             6060..6830
                     /locus_tag="RJ239_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ family molecular chaperone"
                     /protein_id="HDV7331010.1"
                     /translation="MTLVLIILVVLVFYWYYKTWGKQDFLNSATRGAKGFAKGFARGV
                     MEERMDEFKRRMNYYVIALLAKIAKSDGRVSENEAEMIKDLLDANAKDEKERAFLKAS
                     FNEHKENLSDAFYVAKDFLKEVPLPKNERFNVLRVLVFMALIDADFNAKKREILEQIA
                     KAFDIAKSELDAFIASLSNLKSTKKELSLDEAFAILELPNNADLNAVKKQYRNLAKKY
                     HPDILNANNVSEEELKIGVEKFQKINEAYEKVKKHLER"
     gene            6833..8365
                     /gene="purH"
                     /locus_tag="RJ239_000882"
     CDS             6833..8365
                     /gene="purH"
                     /locus_tag="RJ239_000882"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HDV7331011.1"
                     /translation="MRALLSVSDKEGIVEFGKELENLGFEILSTGGTFKLLKENGIKV
                     IEVSDFTKSPELFEGRVKTLHPKIHGGILHKRSDENHIKQAKENEILGIDLVCVNLYP
                     FKKTTIMSDDFDEIIENIDIGGPAMIRSAAKNYKDVMVLCDPLDYEKVIETLKKGQND
                     ENFRLNLMIKAYEHTANYDAYIANYMNERFNGGFGASKFIVGQKVFDTKYGENPHQKG
                     ALYEFDAFFSANFKALKGEASFNNLTDINAALNLASSFDKAPAIAIVKHGNPCGFAIK
                     ENLVQSYIHALKCDSVSAYGGVVAINGTLDEALANKINEIYVEVIIAANVDEKALAVF
                     EGKKRIKIFTQESPFLIRSFDKYDFKHIDGGFVYQNSDEVGEDELKNAKLMSQREASK
                     EELKDLEIAMKIAAFTKSNNVVYVKNGAMVAIGMGMTSRIDAAKAAIAKAKEMGLDLQ
                     GCVLASEAFFPFRDSIDEASKVGVKAIVEPGGSIRDDEVVKAADEYGMALYFTGVRHF
                     LH"
     gene            8464..9192
                     /locus_tag="RJ239_000883"
     CDS             8464..9192
                     /locus_tag="RJ239_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331012.1"
                     /translation="MFKTIGFKVSAAIFVVLLISFIVMQVILNLDFKNTANKMSRANL
                     DTVSTSVFQTMRMAMNLGDPEKIKEAIEDAKSIEGISDIKIYPSKDTIDLFEMKAPQI
                     SNDKRIIEQFSNPKIQALEENVNGVVHLRLIRPLIADESCVACHANANVGSVIGVMDI
                     SHSLEGVQKDISKTSQSYIVIFTIALIFTLCVVLLMLKVVVGKPVLELLNHAKELAQG
                     SGNLKARISVKGQDEIALACGYIN"
     gene            9382..10056
                     /locus_tag="RJ239_000884"
     CDS             9382..10056
                     /locus_tag="RJ239_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002930723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HDV7331013.1"
                     /translation="MSNKANSANEKSFLLLEQMLKSLFNVANKVSTVSQNENELAKKV
                     ENMVNQAGNIQKATQMMDEIADKTNLLSLNAGIEAARAGAFGRGFSVIAEDVRQLAQN
                     SEEFLGNVAQITKELLQSINEVSAELKKNAQSVQALNDDTALLVDDANEVKLCNEDAR
                     ALVTQCTEKIKISQENIQNLLSRMQENVEVSEKNEEISKILLQVADELKIVCHNLESE
                     LNQFQI"
     gene            10066..10500
                     /locus_tag="RJ239_000885"
     CDS             10066..10500
                     /locus_tag="RJ239_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HDV7331014.1"
                     /translation="MKKMLQIALAATFFAGCASTSLTSSTSKGNNELVQNQLFKIEKI
                     IVNGKTFDPKNAEESPNISFENNKFYGYSGCNRFFGSYQTKADTLQIEGDRVASTQML
                     CHPMDVMDFENSFLSNFKGTFKISNENGKLVLSNDEMKIFFK"
     gene            10599..11576
                     /locus_tag="RJ239_000886"
     CDS             10599..11576
                     /locus_tag="RJ239_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agamatine deiminase"
                     /protein_id="HDV7331015.1"
                     /translation="MIKSIPEWSEQEYLMLSLPHEKSDWNPYLEEILQSYKEFVKVVS
                     EFQKVLLIAPKQSDFENFKDIKNVEFFKCDTNDTWIRDFGAIDIVENGRLKALDFTFN
                     AWGNKFQSELDNAVNSKLFKEKFKEELKKVDFILEGGSIDFNGEGVMLTSSHCLLNEN
                     RNSHLNKTQIDTKLKEIFGLKQIIWLENGFIKGDDTDHHIDTLARFIDKNTIAHCICE
                     DEEDEHYLPLQKMKEELKKTGFDLLELPIPKPLYYEERRLGATYANFVFINNALIVPF
                     YKDKNDEIIAKRLSKALPNHKIIGVDARVFLRQNGSLHCSCQNRFKGLR"
     gene            11573..12460
                     /locus_tag="RJ239_000887"
     CDS             11573..12460
                     /locus_tag="RJ239_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HDV7331016.1"
                     /translation="MSLQKKATLVASLCAIVLALVKFIVGLTSGSVAVLSSAIDSLMD
                     FAISAFNFLALKKSSQKANENYNFGFSKIEALMGLLEGVFIVGVGIFIFYESILKIYY
                     KEEIKDLNSSIYVMIFALIMTFFLVLFLNYVAKKTKSLIIESDALHYKTDCLTNACTL
                     GALVLIYFTNLHIIDAIFGIVISLYTAFSAFKIIKKALAFLMDEALPKEQVDKICTLI
                     SNNPEIISYHELKTRKTPSCNYLSVHLVFCPIISLLNAHKISDEIEEGVRKMFENEKW
                     DIQIHLDPYDDAEQERQRQ"
     gene            12457..13329
                     /locus_tag="RJ239_000888"
     CDS             12457..13329
                     /locus_tag="RJ239_000888"
                     /EC_number="3.5.1.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-carbamoylputrescine amidohydrolase"
                     /protein_id="HDV7331017.1"
                     /translation="MKIALIQQKFHLNKEQTIKKTCEFIEEASKQGAELVCLGELHQS
                     EYFCQSENVDFFDYANDYEKDVKFWANIARKNQIVLIASLFEKRSAGLYHNTAVVFEK
                     DGSIAGKYRKMHIPDDPCFYEKFYFTPGDLGFEPINTSLGKLGVLICWDQWYPEAARI
                     MALKGAEILIYPTAIGWFDKDKDEEKQRQLNAWLGVQKGHAIANGLYVVAINRVGFEK
                     DVSGVEEGIRFWGNSFVFGPQGEELCLLDSQNECVKIIEIDKKRSENVRRWWPFLRDR
                     RIEYFTDLTKRFID"
     gene            complement(13341..14687)
                     /locus_tag="RJ239_000889"
     CDS             complement(13341..14687)
                     /locus_tag="RJ239_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7331018.1"
                     /translation="MKSCLYFTFIVLFLTACSTKNLTSLHRENLEQKNENQHYVKLEY
                     EQNVNILPQFAYDINFDAKRYKKYFFNPWHDSFKNYKGQNIFWSFPLYLNSKNTYYFF
                     NKQIIPLSWFKNAINNANIQEFGKLNQKALIIQNTIIKNLPTQRAILKNPFFENEGIP
                     FDYASDGILNTGAPVLISHFSKDKRYAFVLGEAGFGFVESKNLEFFSNDRAKIYENLN
                     FITPLKEKFAIYSEDGKFLFESRIGAIYPYYKEDKNYFYGKIGSKKYKISKKDVSKFP
                     LQFNDKNLKNQLSQVLNLPYGWGGYNFERDCSLLTRDIFSAFGLYLPRNSAAQKNSFN
                     HFDISTLSNSQKKDFLNRFGKAYLSLLYLPGHIMLYAGQITDNNIAIHNIWGLRKDAT
                     QRLLISSSVITSLEIGKNEILEDNLLLSRLKEISFINLNEQEKEQIKSYLENIQNK"
     gene            14736..16079
                     /gene="pif1"
                     /locus_tag="RJ239_000890"
     CDS             14736..16079
                     /gene="pif1"
                     /locus_tag="RJ239_000890"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase Pif1"
                     /protein_id="HDV7331019.1"
                     /translation="MFDKLEKILAYDNVFLSGGAGVGKSFLTNELIKSYRKQKKLAIA
                     LGSSALSAFNIGGVTLHSFFCLGYCDDMMKLSVLDRNQKQKEKLTKLKELLKTIELII
                     IDEISMVSANVFEMIGFRLKNSQFNGKILVVGDFFQLPPVIKEKKETLFNHSYYAFSS
                     FFWQDLNFKNIKLSQPKRTQNMEFYNHLSLIRQGFLDEKILSFFESLRIDYKELENLE
                     DDYTLLCGINKKVNNINQEKLSKLETPLVCFKAQVKKEDKRIKDEELDSWIRSLNILE
                     ELNIKIGARIIFCVNNWDKNYYNGEQGIIEDILYEEEKIYISIIKNNGMKILLEPYTF
                     FMEELEQSGKDFVVNILASVTQFPIKLAYAITIHKSQGMSIEKLVCDIDHIFENGQLY
                     VALSRATNPNTLKIYSTKKINFGFYFANILKIDSNVIEFYKKHNFLDLEIQEQII"
     gene            16089..16823
                     /locus_tag="RJ239_000891"
     CDS             16089..16823
                     /locus_tag="RJ239_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331020.1"
                     /translation="MKKIFLSVFLVLSLNAQNLEIDKIRTDLYSKSGANVLKKVEISL
                     EFDGNNLKENENKLIDAVNTVISGFFYEDIFTEIGKNNFKKTLEKFLDKKYKIKLDDI
                     YIISLSGVEKFDLEEFKRFLESTEAKEKGMGSEVKKALENLEVPKTQVPSVEKIPTPS
                     VPNLEVKQVEQLFKDPDEENKNDNGEINIDNLNTPKMTPDIEEKIKRDLIANPPQIFK
                     ENNASKPYHLPQTGYDIKLDENSTQN"
     gene            complement(16820..17329)
                     /gene="lolA"
                     /locus_tag="RJ239_000892"
     CDS             complement(16820..17329)
                     /gene="lolA"
                     /locus_tag="RJ239_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HDV7331021.1"
                     /translation="MKKTFLIFFIFIGQLFALDLNFNTFSSNFTQIVKSKNSTLSYSG
                     HFILSKDQAYWSYDTPSKKEIYINKNQVTIVEHDLEQVIFSHLDNIPNLNEIFKKASL
                     IDKDKLVAKYDNINYTIKLNQEQIQSISYKDEFENDVIINLNNQIKNPKINSDVFKAK
                     IPQNYDIVR"
     gene            17429..20017
                     /gene="secA"
                     /locus_tag="RJ239_000893"
     CDS             17429..20017
                     /gene="secA"
                     /locus_tag="RJ239_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HDV7331022.1"
                     /translation="MFLNALKAVFGTKNDREVKKYFKRVAQINALEGNYQNLSDDELK
                     AEFAKFKEQILSGEKNENDVLNDVFAIVRETGKRTLNMRHFDVQLIGGMVLHDGKIAE
                     MKTGEGKTLVATLPVVLNAMSGKGVHVVTVNDYLAKRDAEQMSAIYNFLGFSVGVVLS
                     SQNSDIEHKQAYDCDITYGTNNEFGFDYLRDNMKFSKAEKVQREHNFVIVDEVDSILI
                     DEARTPLIISGPTNRTLDGYIKANEVAKQMQKGEAVLPPAKPEGDFVVDEKNRNILIT
                     EAGIAKAEKLFGVENLYSLDNAILAHQLDQALKAHNLFEKDVHYVLRNNEVIIVDEFT
                     GRLSEGRRFSEGLHQALEAKENVKIQEESQTLADITFQNYFRMYNKLAGMTGTAQTEA
                     TEFSQIYSLDVISIPTNIPIKRQDKDDLIYKTQNEKFKAVIEEIKKANAKGQPVLVGT
                     ASIERSEVFHNMLVKEKIPHHVLNAKNHEQEALIIQDAGKKGAVTIATNMAGRGVDIK
                     IDDEIRALGGLYIIGTERHESRRIDNQLRGRAGRQGDPGISRFYLSLEDNLLRIFGGD
                     RIKSIMDRLGIEEGESIESRIVTRAVENAQKKVESLHFESRKHLLEYDDVANEQRKTI
                     YRYRNELLDENYDIRAKISQNIAEYSANVMNDYMLDESGSNVNFENLKAKILYECSTQ
                     ISEKDFENLSVIEMQDKLSQILENSYNEKMLRLEIKELRNIERILYLQVLDNAWREHL
                     YQMDILKTGIGLRGYNQKDPLVEYKKESYNLFLELVNRIKFDSIKLLFSVQFNQEEAQ
                     NLENKANEENEKLLQSSVEMGASEDNLGEAEFKKVPRNAPCPCGSGKKFKECHGKSGP
                     KQGILA"
     gene            20014..21219
                     /locus_tag="RJ239_000894"
     CDS             20014..21219
                     /locus_tag="RJ239_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7331023.1"
                     /translation="MNKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVA
                     MAIMNGFDKEFEKRFFVMNYPITILPKFYAPVNDEFIDELRKTFPNLLFSPYLSTQVV
                     VKGDNRFEGGVLFGVNFNDEKKINEVVAKALKDENLSGFDILVGSALTDEFGLHKNDK
                     LSLIFSNLNPSGFSLVPQTKRFDVKARFTSGLAFYDKAYMYTDVDALKKVLGIPKNPN
                     YDGIHVYSDNAFKDVEKIKSYLKDDYAVVGWWEQNKNFFSALELEKRALFIVLMLIIL
                     VASLNIVSSLLMIVMNRRSEIALLLALGASKNEVKKSFFALGMLIGGGGMIVGVVLAF
                     FALWLLGNFDIVTLPVDVYGTSKLPLDLSLMDFSLTIVGALIIIALSSFYPAKKATQI
                     NILDTLRNE"
     gene            21242..22027
                     /locus_tag="RJ239_000895"
     CDS             21242..22027
                     /locus_tag="RJ239_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDV7331024.1"
                     /translation="MSLFTQKNKNFKPLKPLSKSKIITNLILLILFLILFCYCSFSIS
                     AYHFDFSAIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRFLSTF
                     YIELVRGTPLLVQVLLIYYIIANNLGLDNRYVAGVIILSCFSAAYLAEIFRAGILSIS
                     ISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQ
                     SAQEINSYTFATLEAYVILAITYLVLTLPISIFSRYLERKCQK"
     gene            22089..22164
                     /locus_tag="RJ239_000896"
     tRNA            22089..22164
                     /locus_tag="RJ239_000896"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:22122..22124,aa:Lys,seq:ttt)
BASE COUNT         7922 a         2683 c         4122 g         7442 t
ORIGIN      
        1 tttctaaaaa tttttatcct ataaatttat gttttaagcc tatattttta gcagaaaaac
       61 aactttgttt tttatatata ccttataaaa ataaaagttt ttatcttata aaaatcatct
      121 ttaaaaggac aaatcagtga ataattcaaa taatattttt cagcaaaagc gtatactttt
      181 agctgttgtg atttcttttt tattttttgt tatttatgat tattttttca ttccaaagca
      241 acctttaaaa atagaacaaa acattacaca aaaaaatcaa caaaacacaa gcataaataa
      301 cactcctaat atacaaaatg ccaccacaaa tactccaagt gcggctttag tttcgcaaga
      361 tagtgtgata tctaaggttc aaagcaagca ttttgaagca caaattgact cttttggtag
      421 aatttctgct ttttatttaa aagatagaaa ataccaaaat gagaaaggag aatttataaa
      481 tcttgttagc aaggaaaata gtccttatcc tttagaaatg cgttttagtg atccaagtat
      541 taactcagag gcttttaaaa ttccttatgt tgctaacgct agcaatcttt ttgttgatga
      601 aaatggaagt caagttttaa aactcactca aaatctttct ggattgaaaa tcgaaaaaga
      661 tattactttt tatccaaaag gaaattatga gatagaagtt aaactcagca agaatgcaaa
      721 ttattttata agtccaggat atcgtccaaa tattgccgta gatagttata cagttcatgg
      781 tgctttggta atggataata aagaaaccat cgaaacttat aaagatggag atgtagaaaa
      841 ggatgaaagt gctaataatg tcgtaatgac ttcggctttt gatagatact atgcaacttt
      901 cttttataat tttgataaac ctttaaatgt ggcaatcagc aaggatgcta atcaaaaccc
      961 tatagttttt gcttatagtg ataatgaatt taaagcaggg ggctatatag gctctaaaga
     1021 acatgtgatt ttaagaagta tagatccacg ccttgaagca gttgttgaat atggttggtt
     1081 tacttttatt gctaagccta tgtttgagtt tttgaatttc ttgcatcagt atataggaaa
     1141 ttggggttgg gctatcgttg tgatgacttt aattgtgcgt attattttat tcccgctaac
     1201 ttataagtct atgatttcta tgaataaact taaagatctt gctcctaaaa tgaaagatat
     1261 tagagagcgt tataaaggcg atccacaaaa aatgaatatg cacatgatgg agctttataa
     1321 aaaacatggt gcaaatccta tgagtggttg tttgcctata cttttacaaa ttcctatttt
     1381 ctttgctatt tatcgcgttt tgcttaatgc tattgagcta aaagcagctc cttgggcgtt
     1441 ttggatacat gatttatcgg taatggatcc ttattttatt ttgcctattt taatgggtgc
     1501 aacgatgttt ttacaacagc ttattacacc tatgactata caagatccta tgcaagctaa
     1561 gattatgaaa tttttaccag tgatttttac ttttttcttt atcactttcc cagcaggact
     1621 tacgctttat tggtttgtaa ataacctttg ttctttggtt caacaatggg ttatcaataa
     1681 aatatttgct aaagaacatc acaaaaaaac aagcggagca tgaaaaatga aaatcgaagc
     1741 cattgatctt caaagtgcct taacagaagc ttcaagaagt ttagaatgtt ctgtgatgga
     1801 cttagaatat gagattattc agcatccaag aaaaggtttt tttggatttg gaagaaaaaa
     1861 ggcaattata gaggctaaag caaaaaaaag gattttgaaa aaaaatccta aaaaagaatt
     1921 tacaagttca aaaaatcaca aaccagaaac acatgagcca aaacaagaaa acaagattga
     1981 aataaaaaat gaaaaaaata aaagtcaaaa agaaaaatac acagtaaaaa gtgatgaaat
     2041 ttttgatagt tttcatcgag aaagcaaagg agtgcgtaat actcaggata ttttagatga
     2101 gattcgtatt cagcttgtaa aacttttaga aagctcccag tttaaaatag agcttagtga
     2161 acttagaatg tatgatgaag attgtgtttt gattcgattg gatggggaag atgctgcttt
     2221 gatgataggc aaagaagcac atcgttacaa ggctatttct tatcttttgc ataattggat
     2281 caatttaaaa tataatcttt tagtgcgcct tgagatcgct caatttttag aaaatcaaat
     2341 tcaaggtatg cagctttatt tacaaagcgt gattgaaaaa attaaaattc atggacgcgg
     2401 acaaaccaaa cctttagatg gggttttgat aaaaatcgct ttagagcagt taagagctga
     2461 atttccagat aagtatgtag gaattaagca aaataatgat caaagatttg ttgtaataaa
     2521 cgactttttc aaaaaagatg agtgatacta tagcggctat tgccacagct catggtgtgg
     2581 gttcgatttc tattgtaaga ttaagcggtg aaagggcttt agaatttgcc ttaaagctta
     2641 gccacaaaac caaacttacc ccgcgccatg ctacttttac aaaacttttt aatcaaaata
     2701 atgaaattat cgatgaagct ataatgatat attttaaagc cccttatagt tttacagggg
     2761 aagatatagt agagtttcaa actcatggag gatttagtgt gagtgaagtt ttactcgaag
     2821 aacttgtgag tttaggagca agacttgctt tagcagggga atttagcaaa agagcgtgtt
     2881 taaatggcaa aatgactcct ttaaaagctt taaatataca agatctcata ctttcaaaat
     2941 ctgcacttgc agctaaaatt atagcacgca acatgcaagg aaacttagga gaacttttag
     3001 aaaaaattcg cacagatttg gttaaaacct tggcttttgt agaaactagc attgattatg
     3061 ctgatgatga tttaccttct gatttattag agcaaatttc tactatgtgt gaagaaaatt
     3121 ctaaaatttt aaaagaaatt tatacgcttt ctcaaagcaa aaaaggactc atagaaggtt
     3181 ttaaaatcgc tattgtaggt aagccaaatg taggcaaatc ttcgctttta aatgccttgc
     3241 tttcttatga aagagctatt gtttcagata tagcaggcac cactcgtgat actatagaag
     3301 agaactttaa attaggaacg catttattac gcattataga tacagcgggt attagggaaa
     3361 gtaaagatgt tatagaacaa atcggcgtag ctttaagtaa aaaaagttta gaagatgcag
     3421 atattatttt ggcagtcttt gatgcttcaa gagtgcaaga taaagaagat gagaaaattt
     3481 ttgacttatt agcaaatact gataaaaaaa tcttttggat tttaaataaa agtgatttag
     3541 aaaatgtttt caaaaatact caaaataaaa attttatcaa gcttagtgct caaaaagaca
     3601 ttactttgtt aaaagaagaa ttgcaaaatt atcttaattc ttttgatagc gaaggtatta
     3661 tggtaagttc tttagatctt attaatgctt gtaaaatttc aagtgaagcg atttttagag
     3721 ctaaggggct tttagaggaa agttctttag agttttttgc ttttgagctt aatttagcta
     3781 ttaatgaact tgcaagattt accaaagatt ttcaaagaga tgaaatttta gacgaaatgt
     3841 ttggtaattt ttgtttagga aaatgaaagg atagaaatgg ataaagaaac cataaaagca
     3901 cataaaatca gcgatgaaga atatgcacaa attttagaaa ttttaggacg tgagccaaat
     3961 ttattagaac ttggggttat ttctgcgatg tggagtgagc attgctctta taaatccagt
     4021 aaaaaatatc ttaatggttt tccaactaaa gcaccttggg tgattcaagg tccaggtgaa
     4081 aacgcagggg ttattgatat cgggcaaggt atggcagcgg tttttaaagt ggaaagtcac
     4141 aatcacccta gttttatcga accttttgca ggtgcggcta caggagtagg gggaattttg
     4201 cgtgatgttt ttactatggg tgcaagagtg gttgcggggc taaattcttt aaaatttggc
     4261 gatattcatg atgaaaaatg cggcaaacat caaaaatacc ttgttaaagg cgtggtaaat
     4321 ggaatttctc attatggaaa ttgcatgggt gtgccaacta taggcggaga atgtgctttt
     4381 gatgagtgtt ttaatggaaa tatcttagtt aatgcctttg ctttaggggt ttgtaaaagt
     4441 gaagatatct tttatgctaa ggctgaaggt gtaggaaatc ctgtgattta tgtgggttca
     4501 aaaacagggc gtgatggact tggtggagcg gttatggcaa gtgatagctt caatgaagaa
     4561 agcaaatctt tgcgtcctac agtgcaaatt ggcgatcctt tcagtgaaaa acttcttatg
     4621 gaggcttgtt tagagctttt taaaaccgat tatattgtgg gtattcaaga tatgggtgct
     4681 gcagggctta cttcaagttc ttttgaaatg gcaggaagaa gtggcagtgg catgaaactt
     4741 tacttagata aaactcctat gcgtgaaagc ggtatgactc cttatgagtt aatgcttagc
     4801 gaatctcaag aaagaatgct tatttgtgcg aaaaaaggct atgaagataa ggttatagag
     4861 attttcaaaa aatgggattt agatgctgtg gttatgggtg aagttaccaa tacaggaaaa
     4921 atggagcttt tttggcatga tgagcttgta ggacttattc ctatcgagcc tttaagtgaa
     4981 aaagcgccga ttttaagtcg ccctacaagt gaaccaaaat atttaagtga aattaaaaat
     5041 tataaatttg agttaaaatc aagcgttcaa gagcttttta tacaaatgct tcaaaatgaa
     5101 aatattaata ataaagcttt tatttatgat caatttgatt caagtgtgca aaccaatacc
     5161 ataaaagctg atggaagatt aggtgctagt gttattcgta tcaaagaaaa tggtgcaagt
     5221 gtggctatgg ctatagaatg taattcacgc ttaaattatg taaattctaa aataggagca
     5281 gctttagcag tagcttctgc aggaagaaaa gttgcttgta cgggggctaa acctttggca
     5341 ataagcgatt gtttaaatta tggaaatccg caaaatcctg aagtgatgtg gcaattcgca
     5401 caaggttgcg aaggtattaa agaagcttgt aaagagttaa ataccccagt agtaagcggc
     5461 aatgtttcgc tttataatga aactgaaggc gtaagtattt atccaagtcc tactatagta
     5521 agtgtagggg ttttagaaga tgcaaataaa accctaaaag ctagttttga aaaagaaaat
     5581 ttaagcgttt atcttttggg tgaaagttta ggagaattta gtggatctat ggtaatgaaa
     5641 atccaagata aaaaagtatc aggaagtctt aaagagcttg attataaagc tgaacttgca
     5701 ctttgggatt tgctttataa agccaatcaa aattctttac ttgagtgtgc caatagcgta
     5761 ggaatagggg gtattgctat gactttggca aaaatgtttg ctatttctag tgtgggtgca
     5821 aatttaacaa gtgattttga tgatgaaaaa atgatttttg atgagagtgc aagtcgtgct
     5881 ataatagggc ttagtaaaga aaatgaagaa gcttttttaa atttagctaa agaatttgga
     5941 gtaaaagctt ataaattagg tgtgagtaca agccaaaaac attttaaact tgatagcatt
     6001 gagttaagca aggctgaact tgataagctt tattttgaaa gttttaaaga gcaaatccaa
     6061 tgactttagt tttaattata ctcgttgttt tggtgtttta ctggtattat aaaacttggg
     6121 gaaaacagga ttttttaaac tcagctacaa gaggagccaa aggctttgct aagggttttg
     6181 ctcgtggggt tatggaagaa agaatggatg agtttaaaag gcgtatgaat tactatgtta
     6241 tcgcactttt ggcaaaaatt gcaaaaagcg atggcagggt aagtgaaaat gaagctgaaa
     6301 tgatcaaaga tcttttagat gcaaatgcca aagatgaaaa agaaagagct tttttaaaag
     6361 caagttttaa cgaacataaa gaaaatttaa gcgatgcttt ttatgtggca aaagattttt
     6421 taaaagaagt gcctttgcct aaaaatgagc gttttaatgt cttgcgtgtg cttgttttta
     6481 tggctttaat cgatgcagat tttaatgcta aaaagcgtga aattttagag caaatcgcta
     6541 aagcctttga tatagcaaaa agcgaactag acgcttttat agcaagtctt tcaaatttaa
     6601 aaagtactaa aaaagaatta agtcttgatg aagcttttgc tattttagaa cttccaaata
     6661 atgcggattt aaatgcggta aaaaaacaat accgcaattt ggcaaaaaaa taccatcctg
     6721 atattttaaa tgcaaacaat gttagcgaag aagagcttaa aatcggcgta gagaaatttc
     6781 aaaaaatcaa cgaagcttat gaaaaagtta aaaaacattt agaaaggtaa aaatgagagc
     6841 attacttagt gtgagtgata aagaaggcat agtagaattt ggcaaagagc ttgaaaattt
     6901 aggttttgag attctttcaa ctggggggac ttttaagctt ttaaaagaaa atggaataaa
     6961 agttatagaa gtgagtgatt ttacaaagag tcctgagctt tttgaagggc gtgtgaagac
     7021 tttgcaccct aagattcacg gtgggatttt gcataaaaga agcgatgaaa atcatatcaa
     7081 acaagcaaaa gaaaatgaaa ttttaggcat tgatctagtt tgtgtaaatt tatatccttt
     7141 taaaaaaact accattatga gcgatgattt tgatgaaatt atagaaaata tcgacatagg
     7201 cggacctgcg atgataagaa gtgcagcaaa gaactataaa gatgtgatgg tgctttgcga
     7261 tccacttgat tatgaaaaag tgattgagac tttaaaaaaa ggtcaaaatg atgagaattt
     7321 tcgtttaaat ttgatgataa aagcttatga gcatacagca aattacgatg cttatattgc
     7381 aaattatatg aatgaacgct ttaacggagg ttttggagcg agtaaattta tagtaggaca
     7441 aaaagtattt gatacaaaat atggagaaaa tccacatcaa aaaggggctt tatacgagtt
     7501 tgatgccttt tttagcgcaa atttcaaagc ccttaaaggc gaagcaagtt ttaacaatct
     7561 aaccgatatt aacgcagctt taaatttagc tagtagtttc gataaagctc cagctattgc
     7621 tatagtaaaa catggaaatc cttgcggttt tgctataaaa gaaaatttag tacaaagcta
     7681 tatacatgct ttaaaatgcg atagcgtcag tgcttatgga ggagtggttg caatcaatgg
     7741 aactcttgat gaggctttag caaataaaat caatgaaatt tatgtagaag taatcattgc
     7801 agccaatgta gatgaaaaag ctttagccgt gtttgaaggt aaaaaacgca ttaaaatttt
     7861 cactcaagaa agtccgtttt taatccgcag ttttgataaa tatgatttta aacatattga
     7921 tgggggtttt gtgtatcaaa acagtgatga agtgggcgaa gatgagctta aaaatgcaaa
     7981 gcttatgagt caaagagagg caagtaagga agaattaaaa gatcttgaaa tcgctatgaa
     8041 aatagcagcg tttaccaaat caaacaatgt tgtttatgta aaaaatggcg ctatggtggc
     8101 tataggtatg ggtatgacaa gtagaatcga tgcagcaaag gcagcaatcg ctaaagctaa
     8161 agaaatggga cttgatttgc aaggttgcgt tttagcaagt gaagcctttt ttccttttag
     8221 agatagcata gatgaagcaa gtaaagtagg ggttaaagct atagtagaac caggcggaag
     8281 tataagagat gatgaagtgg taaaggcggc tgatgagtat ggtatggcgc tttattttac
     8341 aggagtaaga catttcttac attaagttta atggaatgtt atgtttttta cacataattc
     8401 aataaaaatt aaataaatta tgtgtaaaat atttccgaaa aattttattt ttaggaaact
     8461 atgatgttta aaactatagg atttaaggtt tctgctgcaa tttttgtggt gttgcttata
     8521 agttttattg taatgcaagt gattttaaat ttggatttta aaaatactgc caataaaatg
     8581 agcagggcaa atttagatac cgtaagtact tctgtttttc aaacaatgag aatggctatg
     8641 aatttaggag atcctgaaaa aattaaagaa gccattgaag atgcaaaaag tatagagggt
     8701 attagtgata ttaaaattta tccttcaaaa gatactatag atctttttga gatgaaagcc
     8761 cctcaaattt caaatgataa gcgtattata gaacaatttt caaatcctaa aattcaagct
     8821 ttagaagaaa atgtaaatgg tgttgtgcat ttaagattga tacgcccttt gattgcagat
     8881 gaaagttgtg ttgcttgtca tgcaaatgct aatgtaggga gtgtgattgg ggttatggat
     8941 atatcacatt ctttagaagg tgttcaaaaa gatataagca aaaccagtca atcttatatt
     9001 gtaatattta ctattgcttt gatttttacc ctttgtgtgg ttcttttaat gcttaaagtt
     9061 gttgttggaa agcctgtttt agagctttta aatcatgcta aagaattagc tcaaggaagt
     9121 ggcaatttaa aagctcgtat ttcagttaaa ggtcaagatg aaattgcttt agcttgtgga
     9181 tatatcaatt aatttatcga aaaaactcat aaggcagtta gcggtgcaag tcataattca
     9241 aaaaatgtag aaaaacaaag caatctttta aattcaaatg ctatttcttt aagtgatatc
     9301 agttcacaaa gtcataagca aatagatcaa agttttaaac ttggtgcaaa tgttggcaat
     9361 gaacttggag aacttgctag tttgtcaaat aaagcaaata gtgccaatga aaaatccttt
     9421 ttattattag aacaaatgct taaatctttg tttaatgttg ctaataaagt atcaacagta
     9481 tctcaaaatg aaaatgaatt ggctaaaaaa gttgaaaaca tggtcaatca agcaggtaat
     9541 atacaaaaag caactcaaat gatggatgag atcgcagata aaaccaattt actatcccta
     9601 aatgctggca tagaagcagc tagggctggt gcatttggac gaggtttttc tgtaattgct
     9661 gaggatgtta ggcagttggc tcagaacagt gaagaatttt tgggaaatgt agctcaaatt
     9721 acaaaagagc ttttgcaaag tattaatgag gttagcgcag aattaaagaa aaatgctcaa
     9781 agtgtacaag ctttaaatga tgacaccgct ttattggttg atgatgctaa tgaggttaaa
     9841 ttatgcaacg aagatgctag ggctttggta actcaatgta ctgaaaaaat aaaaatttca
     9901 caagagaata tacaaaattt actttctcgt atgcaagaaa atgttgaagt aagtgaaaag
     9961 aatgaagaaa tttctaaaat tctgcttcaa gttgcagatg agttaaaaat agtgtgtcat
    10021 aatcttgaaa gcgaacttaa ccaatttcaa atttaaagga ataaaatgaa aaaaatgctt
    10081 caaattgctt tagctgcaac tttttttgcg ggttgtgcta gtacttctct tacttcatct
    10141 acttctaaag gtaataatga acttgtgcaa aatcagcttt tcaaaataga aaaaattata
    10201 gtaaatggca aaacttttga tccaaaaaac gcagaggaaa gtccaaatat cagttttgaa
    10261 aataataaat tttatggtta ttcaggatgc aatcgttttt ttggttctta tcaaactaag
    10321 gcggatactt tacaaatcga aggtgatcgc gtagcttcaa ctcaaatgct ttgtcaccca
    10381 atggatgtaa tggattttga aaattctttc ctttcaaatt tcaaaggaac ttttaaaatt
    10441 tcaaatgaaa atggaaaact tgttttaagc aatgatgaaa tgaaaatctt ttttaaataa
    10501 tgccctaaag cctcgaaata tcgaggcaat cttcttaaat ttgacaaaag tctaaaaaat
    10561 gatacaatta taattttatt atcaaaaaag gtagttaaat gataaaatca attcctgaat
    10621 ggagtgagca agaatacctc atgctttctt taccccatga aaaaagcgat tggaatccct
    10681 acttagagga aattttgcaa agttataaag aatttgtaaa agtggtaagt gaatttcaaa
    10741 aagttttact tatagctcct aaacagagtg attttgaaaa ttttaaagat ataaaaaatg
    10801 tagagttttt taaatgtgat accaatgata cttggatacg cgattttgga gctatagata
    10861 tagtagaaaa tggtcgttta aaagctcttg attttacttt taatgcttgg ggaaataaat
    10921 ttcaaagcga gcttgataat gctgtaaatt ctaagctttt taaagaaaaa tttaaagagg
    10981 agcttaaaaa ggttgatttt attttagaag gaggaagtat tgactttaat ggagagggtg
    11041 tgatgcttac aagctctcat tgtcttttaa atgaaaatag aaattctcat ctaaacaaaa
    11101 ctcaaattga tacaaaatta aaagaaattt ttggtttaaa gcaaattatt tggctagaaa
    11161 atggtttcat aaaaggtgat gatacggatc atcatatcga taccttagca agatttatag
    11221 ataaaaatac catagcgcat tgtatttgtg aagatgaaga ggatgagcat tatttgcctt
    11281 tgcaaaaaat gaaagaagag cttaaaaaaa caggctttga tttattagaa cttcctatac
    11341 ctaagccttt atactatgaa gaaagaagat taggagcgac ttatgcgaat tttgttttta
    11401 taaataatgc tttaattgtg cctttttaca aggataaaaa tgatgaaatc atagctaaaa
    11461 gactttctaa agctttacct aatcataaaa ttataggagt agatgcaaga gtgtttttac
    11521 gacaaaacgg ttctttgcat tgttcttgtc aaaatcgttt caaaggttta agatgagttt
    11581 gcaaaaaaaa gcaactcttg tagcaagttt atgtgctatt gttttagcct tggttaaatt
    11641 tatagtaggc ttaacaagtg gttctgttgc agtactttca agtgcgattg attctttaat
    11701 ggattttgct atttctgctt ttaatttttt ggctcttaaa aaaagctcac aaaaggcgaa
    11761 tgaaaattat aattttggtt tttctaaaat tgaagcttta atgggtttgt tagaaggtgt
    11821 ttttatagtt ggcgtgggga tttttatttt ttatgagagt attttaaaga tttattataa
    11881 agaagaaatt aaagatttaa attcaagcat ctatgtgatg atttttgctt taattatgac
    11941 tttttttctt gtactttttt taaattatgt agctaaaaaa accaaaagtt tgattataga
    12001 aagtgatgct ttgcattaca aaacagattg cttaaccaat gcttgtactt taggggcttt
    12061 ggttttgatt tattttacaa atttacatat tattgatgct atttttggga tagtgatcag
    12121 tctttatacg gcattttctg cttttaaaat cattaaaaaa gctttagctt ttttaatgga
    12181 tgaggcttta cctaaggaac aagtggataa aatttgtact ttgatttcta ataatcctga
    12241 aataatttcc tatcatgaat taaagacgcg taaaactcca agttgtaatt atttaagcgt
    12301 gcatttggtt ttttgcccta taatttcgct tttaaatgcg cataaaattt cagatgaaat
    12361 agaagaaggt gtgcgtaaga tgtttgaaaa tgaaaaatgg gatatacaaa ttcatttaga
    12421 tccttatgat gatgcagaac aagaaaggca aagacaatga aaatcgcttt aatacaacaa
    12481 aaatttcatt taaataaaga acaaactata aaaaaaactt gcgaatttat agaagaagcc
    12541 tctaaacaag gagctgagct tgtttgctta ggagaacttc atcaaagtga gtatttttgt
    12601 caaagtgaaa atgtggattt ttttgactat gctaatgatt atgaaaaaga tgtgaaattt
    12661 tgggcaaata tagctagaaa aaatcaaata gtgcttattg cttcattgtt tgaaaaacga
    12721 agtgccggac tttatcataa tactgcagtg gtttttgaaa aagatggttc tatagcaggc
    12781 aaatatcgca aaatgcacat acccgatgat ccttgttttt atgaaaaatt ttattttact
    12841 cctggagatt tgggttttga acctataaat acaagtttag gtaagcttgg agtgcttatt
    12901 tgttgggatc agtggtatcc tgaagcagca agaattatgg ctttaaaagg agctgagatt
    12961 cttatttatc ccacggcaat tggttggttt gataaggata aagatgaaga aaaacaaaga
    13021 cagctcaatg cttggcttgg cgtacaaaaa ggacatgcta tagctaatgg tttatatgta
    13081 gtagctatca atagagtagg ttttgaaaaa gatgtaagcg gggtagaaga gggcattaga
    13141 ttttggggaa attcttttgt ttttggccct caaggtgaag aactttgtct tttagattct
    13201 caaaacgaat gtgtaaaaat catagaaata gataaaaaaa gaagtgaaaa tgtgcgtcgt
    13261 tggtggcctt ttttgcgaga tagacgcata gaatatttta cagatttaac taaaagattt
    13321 attgattaaa tcaataaatc ttatttgttt tgtatatttt caagatagct ttttatttgc
    13381 tctttttctt gttcgtttaa atttataaaa cttatttctt taagtcttga taaaagcaaa
    13441 ttatcttcta aaatttcatt ttttcctatt tctaaagaag tgatgacgct agaacttatg
    13501 agaagtcttt gggttgcatc ttttcttaag ccccatatat tatgtatggc aatattatta
    13561 tctgtaattt gccctgcata aagcataata tgtccaggta aataaagtaa actaagataa
    13621 gctttcccaa agcggtttaa aaaatctttt ttttgagaat tactaagagt gcttatatca
    13681 aaatgattaa aagaattttt ttgtgcagct gaatttcttg gtagataaag tccaaaagct
    13741 gaaaagatat cacgagttag taaagaacaa tctctttcaa aattataacc gccccagcca
    13801 taaggcaaat ttaaaacttg tgaaagttga ttttttaaat ttttatcatt gaattgtaaa
    13861 ggaaatttag atacatcttt tttagaaatt ttatattttt tagaacctat ttttccataa
    13921 aaatagtttt tatcttcttt gtagtaagga tagatagcac caattctact ttcaaataaa
    13981 aatttaccat cctcgctata gatagcaaat ttttctttta gtggtgtgat aaagttgaga
    14041 ttttcataga ttttcgctct atcgtttgag aaaaattcca aatttttact ttcaacaaat
    14101 ccaaatccag cttcacctaa aacaaaagca taacgcttat ctttactaaa atgtgaaatt
    14161 aagacagggg ctccagtatt taaaatgcca tcgcttgcat agtcaaaagg aattccttca
    14221 ttttcaaaaa aaggattttt taagatagct ctttgggttg gaagattttt aatgattgta
    14281 ttttggataa ttaaagcttt ttgattaagt ttaccgaatt cttggatatt tgcgttattt
    14341 atagcgtttt taaaccatga aagtggaata atttgtttat tgaaaaaata ataagtattt
    14401 tttgaattta aatataaagg aaaggaccaa aaaatatttt gtcctttgta atttttaaat
    14461 gaatcatgcc aagggttaaa gaaatatttt ttatatcgtt ttgcatcaaa attaatatcg
    14521 taagcaaatt gtggcaaaat gtttacattt tgttcgtatt caagttttac ataatgttga
    14581 ttttcatttt tttgttctaa attttcacga tgaagtgaag ttaaattttt tgttgaacaa
    14641 gctgttaaaa atagcactat aaaagtaaaa tataaacaag atttcataat caacctttta
    14701 gaaaaaatag ttataattaa agccaaggaa atataatgtt tgataaacta gaaaaaattt
    14761 tagcttatga taatgttttt ttaagtggtg gtgctggagt tggtaaaagc tttttgacaa
    14821 atgagcttat caaatcttat agaaaacaaa aaaaattagc catagctctt ggttctagtg
    14881 ctctatcggc gtttaatata ggcggtgtta ctttacacag ctttttttgt ttagggtatt
    14941 gtgatgatat gatgaaatta agtgtattgg atcgcaatca aaaacaaaaa gaaaaattaa
    15001 caaaacttaa agagctttta aaaacgattg agcttattat tatcgatgaa atttccatgg
    15061 ttagtgcaaa tgtttttgaa atgataggct ttagacttaa aaattctcaa tttaatggaa
    15121 aaattttagt tgttggagat ttttttcaac tgcctccagt aattaaagaa aaaaaagaaa
    15181 ctttatttaa ccattcttat tatgcttttt cttcattttt ttggcaagat ttaaatttta
    15241 agaatattaa actttctcaa cctaaaagaa cgcaaaatat ggaattttat aaccatttat
    15301 ctttgattag acaaggtttt ttagatgaaa aaattttaag cttttttgaa tctttgcgaa
    15361 ttgattataa agaattagaa aatttagaag atgattatac tttactttgt ggtatcaata
    15421 aaaaagtaaa caatatcaat caagaaaaat taagcaaact tgagaccccg cttgtatgct
    15481 ttaaggctca ggttaaaaaa gaagataaga gaataaaaga tgaagagctt gattcttgga
    15541 ttagaagctt aaatatattg gaagaattaa atattaaaat aggcgctcgt attatttttt
    15601 gcgtaaataa ttgggataag aattattata atggagagca aggcattata gaagatattc
    15661 tttatgaaga ggagaaaatt tatattagca ttattaaaaa taatgggatg aaaattttac
    15721 ttgaacctta tacttttttc atggaagaac ttgagcaatc aggtaaagat tttgttgtta
    15781 atattctcgc aagtgttaca cagtttccta ttaaattagc ttatgctatt actatacaca
    15841 aatcacaagg tatgagtatt gaaaaattag tgtgtgatat tgatcatatt tttgaaaatg
    15901 gacagcttta tgtcgctctt tctcgcgcta caaacccaaa tactttaaaa atttattcta
    15961 caaaaaagat aaattttgga ttttattttg ctaatatttt aaaaatagat tctaatgtga
    16021 ttgaatttta taaaaaacat aattttttag atctcgaaat acaagaacaa atcatttaaa
    16081 ggcattaaat gaaaaaaata tttttaagtg tttttttggt tttgagttta aatgctcaaa
    16141 atcttgaaat agataaaata agaacagatt tgtattctaa aagtggagca aatgttctta
    16201 aaaaagttga aatttctttg gaatttgatg ggaataattt aaaagaaaat gaaaataagt
    16261 taattgatgc tgtaaataca gtaatttcag ggttttttta tgaagatatt tttacagaaa
    16321 ttggaaaaaa taattttaaa aaaactttag aaaaattttt agataagaaa tataagatta
    16381 aactagatga tatatatatc atatctttaa gtggagtgga aaaatttgat ttagaggagt
    16441 ttaaacgctt tttagaaagt actgaggcta aagagaaggg tatgggtagc gaggtaaaaa
    16501 aagcacttga aaacttagaa gttcctaaaa ctcaagttcc tagtgttgaa aagatcccaa
    16561 ctcctagtgt tccaaattta gaagtcaagc aagttgaaca gcttttcaaa gatccagatg
    16621 aagaaaataa aaatgacaat ggagaaatca atatagataa tttaaataca cctaaaatga
    16681 ctccagatat agaagaaaaa attaaaagag atttaatcgc caatcctcca caaatattca
    16741 aagaaaataa cgcaagcaag ccttatcatt tgccacaaac aggctatgat ataaagcttg
    16801 atgagaattc aacgcaaaat tagcgaacta tatcataatt ttgcggaatt tttgccttaa
    16861 aaacatcgga attaattttt ggatttttaa tttgattgtt tagattgatt ataacatcat
    16921 tttcaaattc atctttatag gatatgcttt gaatttgctc ttgattgagt ttaattgtat
    16981 aatttatatt atcatatttt gctacaagtt tatctttgtc tataagactt gcttttttga
    17041 aaatttcatt aagatttgga atgttatcaa gatgagagaa aatgacttgt tctagatcgt
    17101 gctctactat ggttacttga tttttgttga tataaatctc ttttttacta ggagtatcat
    17161 aactccaata tgcttgatct ttactcagta taaaatgccc agaataagaa agtgtagagt
    17221 ttttggattt cactatttgg gtaaaattgc ttgaaaaggt attaaaatta agatcaaggg
    17281 caaaaagttg tcctataaaa ataaaaaata tcaagaatgt ttttttcatt tattttcctt
    17341 aaaaaaatat attttttatg tcattctagc taattttaat taaataatcg ttataatgat
    17401 agcttgaaaa atttataaag gtttagaaat gtttttaaat gctttaaaag ccgtgtttgg
    17461 cacaaaaaat gatcgtgaag ttaagaaata tttcaagcgt gtagcacaaa tcaatgcttt
    17521 agaaggcaac tatcaaaatt taagcgatga tgaattaaaa gctgaatttg caaaatttaa
    17581 agagcaaatt ttaagcggag aaaaaaacga aaatgatgtt ttaaatgatg tttttgctat
    17641 agtcagagag acaggtaaga gaactttaaa tatgcgtcat tttgatgtgc agttaatcgg
    17701 tggtatggtt ttgcacgatg gaaaaatcgc agaaatgaaa acaggagaag gtaaaactct
    17761 tgtagcgacc ttacctgttg ttttaaatgc catgagtggc aaaggcgtac atgtcgttac
    17821 agtaaatgat tatctagcca aaagagatgc tgagcaaatg agtgcgattt ataatttttt
    17881 aggttttagt gttggcgtgg tgctttcttc tcaaaatagt gatatagaac acaagcaagc
    17941 ttatgattgt gatattactt atggaaccaa taatgagttt ggttttgatt atttgcgtga
    18001 taatatgaaa ttttcaaaag ctgaaaaagt tcaaagagag cataattttg ttatcgtaga
    18061 tgaagtagat agtattttaa ttgatgaggc aagaactccg cttatcatca gtggtcctac
    18121 aaatcgtact ttagatggtt atattaaagc caatgaagta gctaaacaaa tgcaaaaagg
    18181 tgaagcagtt ttaccccctg caaaacctga gggtgatttt gtagtagatg agaaaaatcg
    18241 taatatttta attacagaag caggtattgc taaggctgaa aaactttttg gcgtagaaaa
    18301 tttatacagt cttgataatg ctatcttagc tcatcagctt gatcaagcct taaaagcaca
    18361 taatcttttt gaaaaagatg tgcattatgt tttaagaaat aatgaagtta tcattgttga
    18421 tgaatttaca gggcgtttaa gcgaaggacg tcgttttagc gaaggattgc atcaagcttt
    18481 agaagctaaa gaaaatgtaa aaattcaaga agaaagccaa actctagcag atattacttt
    18541 tcaaaattat tttagaatgt acaataaact tgcaggtatg acaggaactg cacaaacaga
    18601 agcgactgaa ttttctcaaa tttatagttt agatgttatt tctataccga caaatattcc
    18661 tattaaaaga caagataaag atgatcttat ctataaaact caaaatgaaa aattcaaagc
    18721 tgtaattgaa gagattaaaa aagccaatgc taaaggtcag cctgtacttg taggaaccgc
    18781 aagtatagag cgcagtgaag tttttcacaa tatgcttgta aaagagaaaa tccctcatca
    18841 tgttttaaat gctaaaaatc acgagcaaga agctttgatt atccaagatg caggtaaaaa
    18901 aggtgctgta actatcgcta caaatatggc aggtcgtggt gtggatataa aaatcgatga
    18961 tgagattagg gctttgggtg ggctttatat catcggtaca gaaagacatg aaagccgccg
    19021 tattgataat caacttcgtg gtcgtgcagg aaggcagggt gatcctggaa taagtcgttt
    19081 ttatctaagt ttagaagata atcttttaag aatttttggt ggggatcgta ttaaaagtat
    19141 tatggatcgc ttgggcatag aagagggcga aagcatagaa tcaagaatcg ttacaagagc
    19201 ggttgaaaat gcgcaaaaaa aagttgaaag cttgcatttt gaaagcagaa agcatttgtt
    19261 agaatacgat gatgtagcaa atgaacaaag aaaaactatt tatcgttatc gtaatgagct
    19321 tttagatgaa aactatgata ttagagctaa aatttctcaa aatatcgctg aatatagcgc
    19381 aaatgtaatg aatgattata tgcttgacga aagcggttct aatgtaaatt ttgaaaattt
    19441 gaaagcaaaa attttgtatg aatgttcaac tcagattagt gaaaaagatt ttgagaattt
    19501 aagcgtcatt gaaatgcaag acaagctaag tcaaattctt gaaaattctt ataatgaaaa
    19561 gatgttaaga cttgagatta aagaattgcg taatatagag cgtattttat atttgcaagt
    19621 tttggataat gcttggagag agcatttgta tcaaatggat attttaaaaa caggaatagg
    19681 acttcgtgga tacaatcaaa aagatcctct tgtggaatat aagaaagaaa gttataatct
    19741 tttcttggag ttggtcaatc gtattaaatt tgatagtatt aaactacttt ttagcgtgca
    19801 atttaatcaa gaagaggcgc aaaatttaga aaataaagcc aatgaagaaa atgaaaagct
    19861 acttcaaagc tcagtagaaa tgggcgcaag cgaagataat cttggcgaag ctgaatttaa
    19921 aaaagttcca cgcaatgctc cttgtccttg cggaagtgga aaaaaattta aagaatgcca
    19981 tggaaaaagt ggtcctaagc aaggaatttt agcttgaata aaagcgtttt aaaatattta
    20041 ctttttaagt atttaagatt tgataaagag caacccttta tcaatctttc tatgcttttg
    20101 gcctttttag gagtttgtgt aggactttgc gttttgcttg tagctatggc aattatgaat
    20161 ggttttgata aagaatttga aaaacgcttt tttgtgatga attatcctat tactattttg
    20221 cctaaattct acgctcctgt aaatgatgaa tttatagatg agttaagaaa aacatttcca
    20281 aatttgttat ttagccctta tttaagcact caagttgttg taaagggaga taatcgtttt
    20341 gaaggtggtg tgctttttgg cgttaatttt aatgatgaaa aaaaaataaa cgaagtggtt
    20401 gctaaagctt taaaggatga gaatttaagt ggttttgata tacttgtagg atcagcactt
    20461 actgatgaat ttggtttgca taaaaatgac aaactttcac ttattttttc aaatcttaat
    20521 cctagtggat tttctttagt accgcaaact aaacgttttg atgttaaagc gcgttttact
    20581 tcagggcttg cattttatga taaagcttat atgtacacag atgttgatgc attgaaaaaa
    20641 gtacttggaa tacctaaaaa tccaaattat gatggaattc atgtatatag cgataatgct
    20701 tttaaggatg ttgaaaaaat taaatcttat ttaaaagatg attatgctgt ggtgggttgg
    20761 tgggagcaaa ataaaaattt tttttcagcc ttagaacttg aaaaaagagc gctttttata
    20821 gtgttgatgc ttattatttt ggttgcaagt ttaaatatag taagttcttt attgatgata
    20881 gtaatgaatc gtcgcagtga aatagcactt ttacttgctc taggtgcaag caaaaatgag
    20941 gtaaaaaaga gtttttttgc cttaggtatg cttattggtg gtggtggtat gatagtgggt
    21001 gtggtacttg cattttttgc tttatggctt ttgggaaatt ttgatattgt aactttacct
    21061 gttgatgttt atggaaccag taaattacca cttgatttgt ctttaatgga tttttcttta
    21121 accattgtgg gtgctttaat aatcatagct ttatcatctt tttatcctgc aaaaaaagca
    21181 actcaaatta atattttaga tactttaaga aatgaataaa ttgtaatttt ggagattttt
    21241 attgtctttg tttactcaaa aaaataagaa ttttaaacct ttaaaacctc tatcaaagtc
    21301 aaaaataatc actaatttaa ttcttttgat tttattttta atattgtttt gttattgtag
    21361 ttttagtata agtgcttatc attttgattt tagcgcaatt gcaacctata aagaaaaatt
    21421 tcttcaaggt tttttaaata ctttaataat cagttttttt tctttattgt tgagtataat
    21481 tttgggtgga gttttttgtg ctttttcttt aagttcgatt gtttttttaa gatttttatc
    21541 tacattttac atagagcttg tcagaggaac ccctttacta gtgcaggtat tattgatata
    21601 ttatatcatt gcaaataatt taggacttga taatcgatat gtggctggag ttattatttt
    21661 atcatgtttt tctgctgctt acttagctga aatatttaga gctggaattt taagtatttc
    21721 tatatctcag cttgagagcg ctagggcttt agggttaaaa gagatgcagg tttttgcgta
    21781 tgtaattttt ccccaagctt taaaaaatat tttagcaccg ctgagtggac aatttgcaaa
    21841 tttaattaaa gatagttcct tattaagcgt tattgctgta aatgaattaa cccaaagtgc
    21901 gcaagagata aattcttata cttttgctac tcttgaagct tatgtaattt tggctattac
    21961 atatcttgtt ttgactttac ctataagtat attttctcgt tatttggaga gaaaatgcca
    22021 aaaatgattt aaaaaagctt gacaaataga gctaattttg gcataatcac atttttattt
    22081 cagaaaatgt ctcgttagct cagccggtag agcatctccc ttttaaggag ggggccgttg
    22141 gttcgaatcc aacacgggac accattata
//
LOCUS       DAPIVO010000027        21698 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.027, whole genome shotgun sequence.
ACCESSION   DAPIVO010000027 DAPIVO010000000
VERSION     DAPIVO010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21698)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21698)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21698
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.027"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..484
                     /locus_tag="RJ239_000897"
     CDS             <1..484
                     /locus_tag="RJ239_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HDV7331025.1"
                     /translation="YNFSLPFKNRYKGGILKLILYKDGRYEFQQSALKQNSNDILLLS
                     DDKINSKSDNLYHKSSLRTFYNQHSYKWQQNLCYDIAFFNEKDELCEGSRTNLILEKN
                     AQFYTPQIQSGMLNGVYRNFLVNLGLIKEKVLFKQDLFEAENIYCINSVHGLKKVKLQ
                     "
     gene            481..1050
                     /locus_tag="RJ239_000898"
     CDS             481..1050
                     /locus_tag="RJ239_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HDV7331026.1"
                     /translation="MKKILFIDNYDSFSYTIIYYLKELGFECKVIKNDAFKKAKELEK
                     FDFTHLIISPGPHSPKESKLSLKAIKYFKKNKKILGICLGHQCIAEVFGGRVSKMQNP
                     MHGKISKLYFKKDPIFKGIKKEIEICQYHSLHISKMPKKCKILAKNSQDIIMAIKHKK
                     YSIYGIQFHPEAILSQQGKKILRNFMKIC"
     gene            1120..1518
                     /locus_tag="RJ239_000899"
     CDS             1120..1518
                     /locus_tag="RJ239_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020246980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331027.1"
                     /translation="MKIDNTLKELSQYTKINTDNTQKEKETKDTQKLDSAVEVTISKE
                     AKEKSSKQLQSKNNQNSNESNSQDDNTDKLAELMQKLAEIQAKIAELTGKMANADKNQ
                     LASLQSQVATLIGQSATIQAQIQEIQNQQK"
     gene            1579..2835
                     /gene="murA"
                     /locus_tag="RJ239_000900"
     CDS             1579..2835
                     /gene="murA"
                     /locus_tag="RJ239_000900"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HDV7331028.1"
                     /translation="MTFLEIKGVDSLEGEVQISGAKNAALPLIASTILAKNEVKISNV
                     PNVADIKTLISLLENLGARVNFQNNSAFLNTNTLNQTIAKYDIVRKMRASILTLGPLL
                     ARFGHCEVSLPGGCAIGQRPIDLHLLALEKMGANIQIKQGYVVASGNLKGNEILFDKI
                     TVTGSENIIMAAALAEGKTKLLNVAKEPEVVQLCEVLKDAGLEIKGIGTDELEIYGSN
                     GELLEFKEFSVIPDRIEAGTYLCAGAITNSKITLDKVNATHLSAVLAKLHQMGFETLI
                     TEDSITLLPAKEIKPVEIMTSEYPGFPTDMQAQFMALALKANGTSIIDERLFENRFMH
                     VSELLRMGADIKLNGHIATIVGGKELNAADVMATDLRASSALILAALAAKGTSKVHRI
                     YHLDRGYENLEEKFKGLGAKITRLEE"
     gene            2832..3992
                     /locus_tag="RJ239_000901"
     CDS             2832..3992
                     /locus_tag="RJ239_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HDV7331029.1"
                     /translation="MKNIFKTLKDLEDQISCLDESELISLEKAKDRILAKDLYARKNL
                     PSFDNAALDGYAFNYTDINEALEIKGTIFAGDKNFYTVAKNECYKIMTGAKMPKNADT
                     ILMLEDEYIEENKLIIKKAPKQYNAYRYKGEELKKGEILLRKGTKLNDKHIALLASQG
                     LYKIEVIRKIRIGIFSSGNELKEPWQECDEESIYNANALPLLTMLQNASYLGIIKDDF
                     KSTKEALENTNFDLLITSGGASVGEADFMEKALDELGFTPLFKGLKARPARPTKLYRK
                     GENFVLILPGNPMAAYLSCFIFAKKIIALLSGSLDNPLKFHATMGMDLKLKSGRNNLI
                     LGNLEKDIFTPFNENKFGSGMILPLIKSEFLLISEENTSELKKGDEITLLKI"
     gene            complement(4014..4862)
                     /gene="lepB"
                     /locus_tag="RJ239_000902"
     CDS             complement(4014..4862)
                     /gene="lepB"
                     /locus_tag="RJ239_000902"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDV7331030.1"
                     /translation="MEILKKLYKFSQSWTGTVVIVLLVIFFFIQAFVIPSGSMKNTLL
                     VGDFLFVKKFSYGIPTPHIPWLEIPVLPDFNKDGHLIKAQGPQRGDIVVFRNPRNEKE
                     HFVKRCVGTGGDRIIYANKTLYVRMHEGDEFMKEHYPNDLVTLGGQIYVKEPYKQKGI
                     HYDPKKDIESDILRFLSIGDFAMSPTYIKELGNHIGFSGGNAYVFDVPENEYFMMGDN
                     RDYSYDSRFWGSVPYRLIVGKPWFVYFSWDKDKNVRWERIGRFVDTLENDEQYIHDHD
                     DEDKLS"
     gene            complement(4872..5720)
                     /gene="folD"
                     /locus_tag="RJ239_000903"
     CDS             complement(4872..5720)
                     /gene="folD"
                     /locus_tag="RJ239_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HDV7331031.1"
                     /translation="MTLLDGKALSAKIKEELKEKNQFLKSKGIESCLAVILVGDNPAS
                     QTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHI
                     CKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDA
                     VIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDM
                     VKEGVIVVDVGINRLESGKIVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKS
                     AKNRLN"
     gene            5800..6147
                     /locus_tag="RJ239_000904"
     CDS             5800..6147
                     /locus_tag="RJ239_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331032.1"
                     /translation="MKIVLMFFLFSINLFGADFITLKEYSKMLYENPRGISCKECHGA
                     DGSEQILGYYMKNGIKTAYKVPSIQNLSFENFKNSLNQSKDAKSIMPNYSLTNDEIVT
                     LYNYIKQFSKEEK"
     gene            6144..7418
                     /gene="hemL"
                     /locus_tag="RJ239_000905"
     CDS             6144..7418
                     /gene="hemL"
                     /locus_tag="RJ239_000905"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HDV7331033.1"
                     /translation="MTNKKAFKEACKFIAGGVNSPVRAFANVQSEPKFISHGKGAYIF
                     DIDGNSYIDYVQSWGPLLFGHCDKDIQKACQKALHKGSSFGAPTLLETELAKLVLSDF
                     PHLEKIRFVSSGTEATMSAIRLARGFTKKDKILKFEGCYHGHSDSLLVSAGSGAATFN
                     SPSSLGVLEDVAKRTLVAKYNDINSVKELFEKNKDIACVIIEPIAGNMGLVPAKQDFL
                     EELAKICKNNQTLLIFDEVMSGYRASYLGSYGINHIQADIITFGKVIGGGLPAAAFAS
                     RAEIMDILSPLGGVYQAGTLSGNPLAMAAGIASLTKAKKKTKLYDKLGKLAKKLTQGM
                     KKLADEKGLPLQACHVGSMFGYFFTKDPVSNYQDALKSDLALFSKFHKNMLENGIYLA
                     PSQFETGFICSKMDDKIIDTTLEAVRESFKRI"
     gene            7415..7744
                     /locus_tag="RJ239_000906"
     CDS             7415..7744
                     /locus_tag="RJ239_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HDV7331034.1"
                     /translation="MSNILKEEKNHLENSNSKRQKIIRKTLEAADGLSLGISMVVAVF
                     IGVGIGYLLKKFTPYPWLFWLGVFWGIGAAILNVYKAYKVQVKSYEEFKERDELIKEK
                     IQKEKNK"
     gene            7744..8247
                     /locus_tag="RJ239_000907"
     CDS             7744..8247
                     /locus_tag="RJ239_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331035.1"
                     /translation="MEHKKALFCIFAIIHLFFWIIFSSLNHFKLDTFLSYEIAFFSVL
                     LIIFASYLNYKKVIIKKSKNYEKDFNFISSLFIKKKQNLSKIIHFKVLKDDLKPNVKE
                     KIHFFAMFFTLFKLMAYVILVAGFLFLHRQDKLDIFAYICGISSLLVCVFIFILYIKK
                     YESKKNY"
     gene            8225..9412
                     /locus_tag="RJ239_000908"
     CDS             8225..9412
                     /locus_tag="RJ239_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7331036.1"
                     /translation="MSPKKIIKSMTALFAGMAFLFAGNALIVSSIGVILKENGESSLA
                     VGVVSSCFFVGALVGTISAHKIISRIGHIRSFGLFGAIFGISAMLHTVSENLIFWAIL
                     RFFIGICYYGLLMVIESWLNEKSKNAIRSRILGFYEIVFYLAFGIGVLIIALNLSKHS
                     VFILSATLILLSSLPLNLIKIKEPVLPASSPISIPKIFDIAPLAIVTSFIAGMLINGF
                     FSMASLFILLQGFDTKAVSYFIFCGVLGGFIAQTIIGTISDKLGRKFAIITCASIGFI
                     TMLIFIFFKLHLYMQYFLGITLGIGIFCLYALALARANDVLVSKNKGVELGRGVLFCY
                     SLGSLFGPLILGFLMQYFEIKGFIWFYIVSLAFLILFAINKPNILNKKFKKKPGNMVI
                     FDD"
     gene            9405..11564
                     /locus_tag="RJ239_000909"
     CDS             9405..11564
                     /locus_tag="RJ239_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HDV7331037.1"
                     /translation="MINTQLASQIANTQKNDLKVDNSASKDKTNLKDNPKEALAQALK
                     QNLGLSKDASSEEILAKFVQNETGTKLKELVNKLLDQINAQKNPDSPVLKQGKNLNLA
                     PNFANELKILSTELAKSDTFTQVLDRLNQILKPASEIKNNNLAPLFKNSGVFLEAKLK
                     DALNEELLPKSFHSLLSTIKGLSSEKLSVQIAQLANTNLSPKDTLKELKNIINSSKNE
                     NKQILNQSSFKALLNLSSKLENFKNYISKNPSHAQEKITPIANKILKELNSIKNDFFK
                     ALNKPENLMIKDPNILKQTATAFEKLENTLKNILGNQASKIQDKENILENLLSNKENI
                     KEEKLNHNTKNQDEEKHIKASKEDENLDSGIKTHEEDTQDTKNDIQNNETENKPDNDI
                     KNSTPNQEKIKDEKQEKSKENIKENPKFYETKTENKTSINTNTNTSNPNTNNTQNLNN
                     TQNIQSNNNQTMQNIFKNQEFIKQNIVKNLAFNVENLDLEQVQDLSKNLSNLSRRLNE
                     SLKELEPYTQNAKLNQAELKNLEHKLNLSIKDLAQIKPKTEQDIAESLHHDVKSTLLQ
                     ISNLAKNEGNEAVYNQANRLLAQIEINQLMSLANDSINTYLPFSWDDLNDSKIMFRRG
                     KKDKFFAQIKLEFAKLGDLEILISLNNEKYIDINIMAENIEFRKTIYENAHELKRNIN
                     KAGLLSANFFVGDIIRSKFDTRNMKNLDLEMGMDKKV"
     gene            11561..11842
                     /locus_tag="RJ239_000910"
     CDS             11561..11842
                     /locus_tag="RJ239_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FlhB-like flagellar biosynthesis protein"
                     /protein_id="HDV7331038.1"
                     /translation="MSKIKRSIKKAVALGYQKEKNSAPKVLASGKGESAAKIISLAKE
                     HGVPIKEDEDLIEILSKLDLGDEIPPNMYKAVAEVFAFIYQMANKTPKN"
     gene            complement(11839..12639)
                     /locus_tag="RJ239_000911"
     CDS             complement(11839..12639)
                     /locus_tag="RJ239_000911"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDV7331039.1"
                     /translation="MSFSKESSRLFGFVAGIKFPKMIQKVINENYVKYFNINMSEFKA
                     PCEYESLNALFTRTLQIPRKFEEGFISPSDGKILECGSTFLANEEHFAFSIKGHAYSV
                     EELLKDSFEKDELKNGLDYVNIYLSPKDYHRYHSPCDMQILSATYTSGVLYSVNEKHL
                     ECISNLYVKNERVSLKCQNEKGIFWLVFVGAQNVGKMRFNFDASIQTNAKISHNFTRK
                     YENLNFKKGEELGNFELGSTIVLISQKGLLTFNLKVGQGIKFGEKIAD"
     gene            complement(12636..13760)
                     /locus_tag="RJ239_000912"
     CDS             complement(12636..13760)
                     /locus_tag="RJ239_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDV7331040.1"
                     /translation="MIFLIFSFIVLLIFGLANVYIYKRLIKKITLFKYFYKIFSFIFI
                     VLFLAQAVFLIFRRDEYLSDTWYEILAMFYAPTYCLFFMTLAWDFVKLILALMGKRDK
                     TYNLILRLIFELSLIVLSVFLIYASINNALKTPEVKSVDVEIPNLKQDLKIAMLTDIH
                     LGKNLHENFLDKLITKVNLQSPDMVVIVGDLIDTNPKDLKNYISKLNDFNSTYGTFYA
                     LGNHEYYHGINEVLDLLRKHTNMKILVNQNLDLGFINIAGLGDLAGLDRGLYAPDLAR
                     IKVDLNTSKASILLTHQPKTALLYDLSDFDLVLSGHTHGGQIFPFMFLVKLQQGFVYG
                     LYDLGEKTKLYVSSGAGFWGPSLRVFAPSEIVILNLKGKK"
     gene            13846..15141
                     /locus_tag="RJ239_000913"
     CDS             13846..15141
                     /locus_tag="RJ239_000913"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDV7331041.1"
                     /translation="MYRFAPSPTGDMHIGNLRAAIFNYICARQKNMDFILRIEDTDKA
                     RNIAGKEEEIKEILNLFSISWQHYYIQSENLKFHRQMALKLVSEKKAFACFCTEEELE
                     AKKELAKKQGKAYRYDGTCEKLADIDVLECEKPFVIRLKKPTHTMKFTDFIKGELSFE
                     PENIDSFVIMRTDKTPTYNFACAVDDMLENVTCIIRGEDHVSNTPKQEHIRASLGYNK
                     AMTYAHLPIILNEEGVKMSKREAHSSVKWLLESGILPSAIANYLVILGNKTPCEIFTL
                     EEAIKWFDISKVSKAPARFDLKKLLQINREHIKMIKDDELNKILDLNKDLAQLAKFYT
                     QETSTIKELKEKMQAIFNAKDFGEFETECKILKELLKDIELFENYEDFKNELLNKSNL
                     KGKKFFMPLRIILTGNIHGPELSDLYPYIKNFIHELARI"
     gene            15144..15425
                     /locus_tag="RJ239_000914"
     CDS             15144..15425
                     /locus_tag="RJ239_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HDV7331042.1"
                     /translation="MVIDSFIISIFQVLQIVINIYTWIIIITALLSWVNPDPYNPIVQ
                     ILYKLSYPAYALVRKIPTRIGNIDLAPLIIVLALQFLGIFLGNILRSIL"
     gene            15422..17047
                     /locus_tag="RJ239_000915"
     CDS             15422..17047
                     /locus_tag="RJ239_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HDV7331043.1"
                     /translation="MIKKILVFLFIFSSLNATQYSIEKLKKEENSLAKDYYIYRLLEK
                     NKISKKDAQDLNSHIFRYIGKIKSELEKIIPLKPYINPKYAKCYTYIANTILDANLTC
                     QSVRLNSLVFIASLNSKDRTTLAQTFKNQRPDLTNLLLAFNTSDPMSYIVQKEDINGF
                     FKLYNYSKKYDLDLNTSLVNKLPNHIGFKDFAQNIIIKKENPKFRYSMLEINPENVSE
                     DSAFYLGVNALTYDKTELAYDFFKKAAQSFKSQSNKDNAIFWMWLIKNNEEDLKTLSQ
                     SSSLNIYSLYAKELTNTPFPKIESLNPSKKKNNFNMQDPFAWQKINKQIRDANASQLD
                     VLAKEFDTQETLPIYAYILERKNNFKKHYFIMPYYDNIKDYNKTRQALILAIARQESR
                     FIPTAISVSYALGMMQFMPFLANHIGEKELKIPNFDQDFMFKPEIAYYFGNYHLNYLE
                     SRLKSPLFVAYAYNGGIGFTNRMLARNDMFKTGKFEPFLSMELVPYQESRIYGKKVLA
                     NYIVYRHLLNDSIKISDIFENLIQNKANDLNKS"
     gene            complement(16944..17429)
                     /locus_tag="RJ239_000916"
     CDS             complement(16944..17429)
                     /locus_tag="RJ239_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331044.1"
                     /translation="MKIYSVILGAFLLGACSLKDQAIVDTNLKSQTLMFTQKYKITQD
                     KINAIITMSYLNPILDKTSKDDVLALSFTPNTLKIQNLEVFINNKKANIEKLDDEYLK
                     YIIQNNYTDYFKVSLPSVKEEIRLVAKICLDHLPCFELNFQKYPKSLYYRSEDVDTQY
                     N"
     gene            17525..18016
                     /gene="mobB"
                     /locus_tag="RJ239_000917"
     CDS             17525..18016
                     /gene="mobB"
                     /locus_tag="RJ239_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HDV7331045.1"
                     /translation="MKQLIIAFSGPSNSGKTTLITKIADNFLQQNLKVLIIKHDPADK
                     AQFDFNGKDSFKFFQSGAEVMVLSPTRTTFFSHENRDILKALKLSPDFDICLVEGLKT
                     LDLPRISVFCKEIDESYFIFSNAIASYEKISHPYLTWLDLNDIQAICQYILKNAKNLQ
                     GEL"
     gene            18018..18860
                     /locus_tag="RJ239_000918"
     CDS             18018..18860
                     /locus_tag="RJ239_000918"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HDV7331046.1"
                     /translation="MQEVISYIQKAVLEISNALKFPDTSYSQNQNFTGDTQLKFDVLS
                     DEIITKTLSQCSSIKAIISEEKDEILTLNERANFIVAYDPLDGSSLMDVNFAIGSIFA
                     IYEEKASAKNLRAALYSMYGARLELVICKDQPKLYRLNANNEFIFIKDLRMNEKGKIN
                     ATGGTQKFWEEKHAKFIKSLFDEGYRLRYSGAMVSDINQILLKRGGIFSYPATQDAPN
                     GKLRAFFEVFPLAFIIEKAGGKTTNGKNRSLLELEFDKIHATTPCFFGSEYEISKLLK
                     AYNE"
     gene            18853..19050
                     /locus_tag="RJ239_000919"
     CDS             18853..19050
                     /locus_tag="RJ239_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331047.1"
                     /translation="MNEVRDEFEQDMDKKKEILLSCQNSKNLNSCYNCDEIFNCQTRK
                     NYVDAVYNSMSKGKTEGGFDF"
     gene            19060..20946
                     /gene="metG"
                     /locus_tag="RJ239_000920"
     CDS             19060..20946
                     /gene="metG"
                     /locus_tag="RJ239_000920"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HDV7331048.1"
                     /translation="MRYITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLT
                     GTDEHGQKIEEAAKLRNSTPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFIK
                     AMFLKMWQKGDIYKDEYEGHYCISCESFFTQSQLINDCSCPDCGKQTRILKEESYFFK
                     LSKYQDKILQWYEEKDPILPKNKKNELINFVQNGLKDLSITRTSFDWGIKLPQEINDD
                     KHIIYVWLDALFIYVSSLDFQNKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDL
                     PLPKFIGAHGWWTKEGEKMSKSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFS
                     ENMLINRINAELSNEFGNLLNRIIGMSTKYSQGNISKEGVLKFYNAELNQAKEHLNLA
                     VEFLENLQCNRYLEELFKALSVANLAISKYEPWSLIKENKHEQANALVALCANILAKT
                     SLLLSPTLPKSSQKVALALNFEISSANYTKMILDNELLDFKANPCEALFPKVEKALLK
                     QEIKEEPKKEESPKIKIDDFAKIEIKVAKVLDCQNIEGSEKLLKFQLELDDKEIRQVL
                     SGIAKYYKASDLIGKQVCVISNLKKAKIFGHESDGMILSAKSGDKLVLIAPEQLVQNG
                     SLVG"
     gene            20950..>21698
                     /locus_tag="RJ239_000921"
     CDS             20950..>21698
                     /locus_tag="RJ239_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331049.1"
                     /translation="MQISNLGELLNATLIHEGSVLSVEGFAINLNELKTGFAFFNNDK
                     KEIAQAVKKGAYAIITENDITIEDKEIFYFRVENLERALVRFLRFFCEDKECEFLLFK
                     SYELSLCKAFYFNILKGNIFADFEKLIKAKKGEIFCYCEENYLNKLCTYSHSLKDANF
                     TLLSRSSFFFTTLICENLYFKNLNLPFFYANSFAKIISFLKEKSQKIIFDFNKIDDFK
                     IYFIDDKFEITPFGSSSQAFIVSNNQNTFEF"
BASE COUNT         8192 a         3236 c         3178 g         7092 t
ORIGIN      
        1 ttataatttt tccctaccct ttaaaaatcg atacaaagga ggaattttaa aactgatttt
       61 atataaagac ggaagatacg aatttcaaca aagcgcctta aaacaaaatt caaatgatat
      121 tttgctttta agtgatgata aaatcaactc aaaaagtgat aatctctatc acaaaagctc
      181 tttacgtact ttttataatc aacactcata caaatggcag caaaacttgt gttatgacat
      241 agcttttttt aacgaaaaag atgaactttg cgaaggctca agaaccaatc tcatcttaga
      301 aaaaaacgct caattttata ctccacaaat tcaaagtggt atgttaaatg gagtatatag
      361 aaacttctta gtcaatcttg gtttgataaa agaaaaagta ttatttaagc aagatttatt
      421 tgaagcagaa aatatttatt gtattaattc cgtgcatggt ttaaaaaagg taaaattaca
      481 atgaagaaaa ttttatttat agataattat gattctttta gttataccat catctattat
      541 cttaaagaac ttggttttga atgcaaagtg ataaaaaatg atgcctttaa aaaagctaaa
      601 gaattagaaa aatttgattt tactcatctt atcatttctc ctggccctca ttctcccaag
      661 gaatctaaat taagcttaaa agcaatcaaa tattttaaaa aaaataaaaa aattttaggt
      721 atatgtttag ggcatcagtg catagctgaa gttttcggcg gtagggtttc taaaatgcaa
      781 aatcctatgc atggtaaaat ttctaaactt tattttaaaa aagatcctat ttttaagggt
      841 attaaaaaag aaattgaaat ttgccaatat cattctttac atataagcaa aatgcctaaa
      901 aaatgtaaaa ttttagccaa aaattctcaa gacattatta tggcaattaa acataaaaaa
      961 tatagtattt atggcataca atttcaccct gaggctattt taagtcaaca gggtaaaaaa
     1021 atactacgta attttatgaa aatttgttag ttaatagatg taaataataa taaaaaaaga
     1081 gacgatataa aaaatataca aagttaagga gaaataaata tgaaaattga taatactcta
     1141 aaagaattaa gtcaatatac taaaataaat acagataata cacaaaaaga aaaagaaaca
     1201 aaagatacac aaaagttaga ttcagctgtt gaagttacta ttagcaaaga ggcaaaagaa
     1261 aaatctagta agcaattgca atctaaaaat aatcaaaatt ccaatgaatc gaattctcaa
     1321 gatgataata cagataagct tgcagaattg atgcaaaagt tagcagaaat acaagcaaaa
     1381 atagcagaac ttactggaaa aatggctaat gctgataaaa atcaacttgc aagtttgcaa
     1441 agtcaagttg caacattgat tggtcaatct gcaactattc aggcgcaaat tcaagagatt
     1501 caaaatcaac aaaaataaat aatttttcca aaagtttaag aatgatataa taaagcattt
     1561 tattttttaa ggaaaaatat gacttttttg gaaattaaag gtgttgattc tttagaaggt
     1621 gaagttcaaa ttagcggcgc taaaaatgcc gccctaccct taatcgcttc tactatactt
     1681 gctaaaaatg aagtaaagat atccaatgtc ccaaatgtag ctgatataaa aactcttata
     1741 tctttgctag aaaatttagg agctagggtc aattttcaaa acaatagtgc ttttttaaac
     1801 acaaacactc ttaatcaaac catagccaaa tatgacattg tgcgcaaaat gcgtgcttcc
     1861 atacttactc tagggccttt gcttgctcgt tttgggcatt gtgaagtatc tttgcctggt
     1921 ggatgtgcta taggacaaag acctattgat ttacatcttt tagccttgga aaaaatggga
     1981 gcaaacatac aaatcaaaca aggctatgtc gtagctagtg gaaatttaaa aggcaatgaa
     2041 attctttttg ataaaatcac ggttacaggt agtgaaaaca tcatcatggc agcagcttta
     2101 gctgaaggta aaaccaagct cttaaatgtt gcaaaagaac ctgaagtagt tcaactttgc
     2161 gaagttttaa aagacgcagg acttgaaatc aaaggcatag gcacagatga acttgaaatt
     2221 tatggcagca atggagaact tttagaattt aaagaattta gtgttatacc tgatagaatt
     2281 gaggcaggaa cttatctttg tgcgggagct attacaaatt ctaaaattac tttagataaa
     2341 gttaatgcca ctcatcttag tgcagtttta gcaaaacttc atcaaatggg ttttgaaact
     2401 ttgattacag aagatagtat caccctactt cctgctaaag aaattaaacc tgtagaaatc
     2461 atgacaagcg aatatccagg ctttccaacc gatatgcaag cgcagtttat ggcattagct
     2521 ttaaaagcta atggaactag tattatcgat gaaagactat ttgaaaatcg tttcatgcat
     2581 gtaagtgaac ttttaagaat gggtgcggat atcaaactca acggtcatat tgctactata
     2641 gtaggcggaa aagaacttaa cgctgctgat gtcatggcta cagatttgcg tgcttcttca
     2701 gcccttatct tagcagctct tgcagctaaa ggcacaagca aagtccatag aatttatcat
     2761 cttgatagag gttatgaaaa tttagaagaa aaatttaaag gcttaggggc taaaatcaca
     2821 aggcttgaag aatgaaaaat atctttaaaa ccttaaaaga cttagaagat caaatttcat
     2881 gcttagatga aagtgaactt attagccttg aaaaagcaaa agatagaatt ttagctaaag
     2941 atttatacgc tagaaaaaat ctacccagtt ttgacaatgc tgctcttgat ggctatgctt
     3001 ttaattatac tgatatcaat gaggctttgg agattaaagg gactattttt gcaggagata
     3061 aaaattttta tacagttgct aagaatgaat gctataaaat catgacaggg gctaaaatgc
     3121 ccaaaaatgc tgatactatc ttaatgttag aagatgagta tatagaagaa aataaactca
     3181 tcattaaaaa agcccctaaa caatacaatg cctatcgcta taaaggcgaa gaattaaaaa
     3241 aaggtgaaat tttacttcga aaaggcacca aacttaatga taaacatatc gccctgcttg
     3301 cttctcaagg gctttataaa atagaagtca taagaaaaat tcgcataggt attttttcaa
     3361 gtggaaatga gctaaaagaa ccttggcaag aatgcgatga agaaagtatt tataatgcca
     3421 atgctttgcc tttactaacc atgcttcaaa atgcttctta tttgggtatt attaaagatg
     3481 attttaaaag cactaaagag gctttagaaa atacaaattt tgatctttta atcacttcag
     3541 gaggtgcaag cgttggcgag gctgatttta tggaaaaagc tttagatgaa ttaggcttta
     3601 ctccgctttt taaaggacta aaagcacgcc ctgcaagacc tactaagctt tatagaaaag
     3661 gtgaaaattt cgtattgatt ttaccaggaa atcctatggc agcttatctt tcttgtttta
     3721 tttttgctaa aaaaattatt gctttattaa gtggaagcct agacaatcct ttaaaatttc
     3781 atgctacaat gggtatggat ttaaagctta aaagtggaag aaacaatctc attttaggaa
     3841 atttagaaaa agatattttt acaccattta atgaaaataa atttggatct ggtatgatac
     3901 ttccacttat taaaagtgag tttttactta taagcgaaga aaatacaagt gaattaaaaa
     3961 aaggtgatga aatcacgctt ttaaaaatat aatgtttgtg tttttcacaa acattagctt
     4021 aatttatcct catcatcatg atcatggata tattgttcat cattttccaa ggtatcaaca
     4081 aaacgcccta tcctttccca gcgaacattt ttatctttat cccaagagaa atatacaaac
     4141 caaggtttac ctactatcaa cctataagga acagaacccc aaaaacgact atcataagaa
     4201 taatcacgat tatcacccat catgaaatac tcattttcag gtacatcaaa aacataagca
     4261 tttccgccgc taaaacctat atgatttcca agttctttaa tataagttgg agacatggca
     4321 aaatcaccta tactaagaaa gcgtaaaata tcgctttcta tatctttttt tggatcataa
     4381 tgaatacctt tttgtttata aggttctttt acataaattt gccctccaag agtaacaaga
     4441 tcattcggat aatgttcttt cataaattca tcaccctcat gcattcttac ataaagtgtt
     4501 ttatttgcat aaattattct atctcctcct gtgcctacac aacgctttac aaagtgttct
     4561 ttttcatttc taggatttct aaaaacaact atatctcctc tttgtggccc ttgtgctttt
     4621 atcaaatgcc catctttatt aaaatccggc aaaacaggaa tttccaacca aggaatatga
     4681 ggagttggga taccatagct aaatttttta acaaataaaa aatcccctac caataaggtg
     4741 tttttcatag aaccagaagg aataacaaaa gcttgtataa agaaaaaaat caccaaaaga
     4801 acaataacta cagttccagt ccaagactgt gaaaatttat ataatttctt taaaatttcc
     4861 atagattttc cctaattaag tctattttta gcagatttaa ctgtgttttc taaaagcatg
     4921 gctatagtca taggacctac tccgcctgga acaggagtta tataactaga ttttttagat
     4981 acctcttcaa aatccacgtc tccaactatc tttccacttt caagacgatt gattccaaca
     5041 tcaacaacaa tcactccttc ttttaccata tccgatcgaa gtaaattcac acaacctgct
     5101 gctactataa tcaaatcagc ttgcctagta taaaggctca aatctttggt tttaatatga
     5161 caaacgctta ctgtagctcc agcgtttaaa agcatagtag ccataggacg acctactata
     5221 tttgaagcac ctataataac agcgtctttt ccttctaaat caatttcata agccttcaaa
     5281 agcttcataa ctccaagtgg agtacaaggc aaaaacccac tttctaagcc taaatttaaa
     5341 tatcctacat taataggatg aaagccatca acatctttac tacttataat actttcaagt
     5401 attaaatctt tacaaatatg atcaggtaag ggaagctgaa ccaaaattcc atgaacacta
     5461 tcatcgtgat ttaaggtatt aatcaatgcc aaaagttcat tttgtgtagt attttcatta
     5521 agatgataaa ctaaagattt aattccacat tcttcacagg ctttagcctt agattttaca
     5581 taagtttgac ttgcaggatt atctccaacc aagataacag ctaaacagct ttcaatccct
     5641 ttgcttttca aaaattgatt tttttctttt aattcttctt tgatttttgc gcttaaagct
     5701 ttaccatcaa gcaaagtcat tattttcctt ctataaattt aatcactttt ttaaagtaaa
     5761 aattgtatca tattaaaact tcattaacaa ggtgaaactt tgaaaattgt tttaatgttt
     5821 tttttattta gtatcaatct ttttggtgct gattttatca ctcttaaaga atactctaaa
     5881 atgctttatg aaaatccaag gggtattagt tgtaaagaat gtcatggagc agatggaagc
     5941 gaacaaattt taggatatta tatgaaaaat ggtattaaaa cagcttataa agttccaagt
     6001 atacaaaatc ttagttttga gaattttaaa aattctctta atcagagtaa agacgcaaaa
     6061 tcaatcatgc caaattactc tttaacaaat gatgaaattg taactttata taattacatc
     6121 aagcaattta gcaaggaaga aaaatgacaa acaaaaaagc ttttaaagaa gcgtgtaaat
     6181 tcatcgcagg cggtgtaaat tctccagttc gtgcttttgc aaatgttcaa agtgagccaa
     6241 aatttatttc tcatggaaaa ggtgcttata ttttcgatat agatggaaat tcttatatag
     6301 actatgttca aagctggggg cctttacttt ttggacattg cgataaagat atacaaaaag
     6361 cttgtcaaaa agcacttcat aaaggttcaa gttttggagc tccgacttta ttagaaactg
     6421 aacttgccaa gcttgtttta tctgattttc ctcatttaga aaagatccgc tttgtaagca
     6481 gtggaacaga agcaaccatg agtgctattc gtcttgcccg tggctttact aaaaaagata
     6541 aaattttaaa atttgaagga tgttatcacg ggcattctga ttcattatta gtgagtgcag
     6601 gaagtggtgc tgctactttt aactctccta gttctttagg tgttttagaa gatgtagcta
     6661 aacgcacttt agtagcaaaa tataatgata taaatagcgt taaagagctt tttgaaaaaa
     6721 ataaagatat tgcatgtgtt atcattgagc ctattgctgg aaatatgggg ttagttccag
     6781 ctaaacaaga ttttttagaa gaacttgcta agatctgtaa aaacaatcaa actctgctga
     6841 tttttgatga agtaatgagt ggatatagag catcttacct tggttcctat ggaatcaatc
     6901 atatccaagc agatataatt acttttggta aggtaatagg aggcggtcta cctgcagcag
     6961 catttgcttc tagagctgaa attatggata ttttaagtcc tttaggtgga gtttatcaag
     7021 caggaacttt aagtggaaat cctttggcaa tggctgcagg tatagcaagt cttacaaaag
     7081 ccaaaaagaa aaccaagctt tatgacaaac ttggaaaatt agcaaaaaaa cttacccaag
     7141 gaatgaaaaa attagcagat gaaaaaggac ttccactgca agcttgtcat gtaggttcta
     7201 tgtttggata ctttttcacc aaagatcctg tatcaaacta ccaagatgca ttaaaatctg
     7261 atctagcatt attttcaaaa tttcacaaaa atatgcttga aaatggaatt tatttagcac
     7321 cttctcaatt tgaaacaggc tttatatgtt caaaaatgga tgataaaatt atagatacaa
     7381 cattagaggc tgttagggaa agctttaaaa gaatatgagt aatattttaa aagaagaaaa
     7441 aaatcactta gaaaattcca acagcaaaag acaaaaaatc attcgcaaaa ctcttgaagc
     7501 tgcggatggt ttaagtcttg gtatctctat ggttgttgct gtatttatag gtgtgggaat
     7561 aggatacttg cttaaaaaat ttactcctta tccttggctt ttttggcttg gagttttttg
     7621 ggggatcggt gccgctatac ttaatgttta taaagcttat aaagttcaag taaaaagcta
     7681 tgaagaattt aaagaaagag atgagttgat caaagaaaaa attcaaaaag aaaagaataa
     7741 ataatggaac ataaaaaagc tctattttgt atttttgcca ttattcattt atttttttgg
     7801 atcatatttt catcgttaaa tcattttaaa ttagatacat ttttaagcta tgaaatagct
     7861 ttttttagtg ttttattgat tatttttgct tcttatttaa attataaaaa agtcattata
     7921 aaaaaatcaa aaaattatga aaaagatttt aatttcattt cgtcactttt tatcaaaaaa
     7981 aaacaaaatt tatcaaaaat tattcatttt aaagttctaa aagacgattt aaagccaaat
     8041 gttaaagaga aaatccattt ttttgctatg ttttttactc tctttaaatt gatggcttat
     8101 gtaatattgg ttgctggatt tttattttta catcgccaag ataaattaga tatctttgct
     8161 tatatttgtg gaatttcatc cttgctagtt tgtgtgttta tttttatttt atatataaaa
     8221 aagtatgagt ccaaaaaaaa ttattaaatc aatgacagca ctttttgctg gtatggcatt
     8281 tttatttgca ggtaatgcct tgatagtaag ctctataggt gttatattaa aagaaaacgg
     8341 agaaagttct ttagctgttg gagtagtaag ttcttgtttt tttgtaggcg ctcttgttgg
     8401 aactatcagt gctcataaaa ttatttctcg tataggtcat atacgctctt ttgggctatt
     8461 tggtgctatt tttggaattt cagctatgct tcatacagta agcgaaaatc ttattttttg
     8521 ggctatttta agatttttca taggaatttg ctactatgga cttttaatgg tcatagaatc
     8581 atggcttaat gaaaaaagca aaaatgccat tcgatctaga attttaggct tttatgaaat
     8641 tgttttttat cttgcgtttg gtattggagt tttaatcata gcgttaaatt tgagcaaaca
     8701 tagtgtattt attctcagtg caactttaat tttactttca tctttacctt taaatctaat
     8761 taaaatcaaa gaacctgttt tacccgcatc aagtcctatt tctataccta aaatttttga
     8821 tatagctcct ttagctatcg tcacaagctt tatagctgga atgcttataa atggcttttt
     8881 ttctatggca tctttattta tacttttgca aggttttgat acaaaagcgg tttcttattt
     8941 tatattttgt ggggttttag gtggttttat tgcacaaacc atcataggaa ctatttcaga
     9001 caaacttggt cgcaaatttg ccattatcac ttgtgcaagc ataggattta tcactatgct
     9061 tatatttatc ttttttaaac ttcatttata tatgcaatat tttttaggaa ttactcttgg
     9121 tataggaata ttttgcttat atgctttagc acttgctaga gcaaatgatg ttttagtaag
     9181 caaaaataaa ggtgtagagt taggtcgtgg ggttcttttt tgttattctt tgggctcttt
     9241 gtttggccct ttaattttag gttttttaat gcaatatttt gaaatcaaag gttttatatg
     9301 gttttatata gtttctttag catttttaat tctttttgct atcaataaac caaatatttt
     9361 aaataaaaaa tttaagaaaa agcctggaaa tatggtgata tttgatgatt aatactcaac
     9421 tagcaagtca aattgccaat acgcaaaaaa atgatttaaa agtagataac tctgcttcaa
     9481 aagataaaac aaatttaaaa gacaatccaa aagaagcact tgcacaagct ttaaagcaaa
     9541 atttaggttt aagcaaggac gctagtagtg aggaaatact agcaaaattt gttcaaaatg
     9601 aaacaggtac caaattaaaa gaacttgtta ataaactttt agatcaaatc aatgctcaaa
     9661 aaaatcccga ttcccctgtg cttaaacaag gaaaaaattt aaatttagct cctaattttg
     9721 ctaatgaatt aaaaatctta agtacagaac ttgcaaaaag tgatactttt acacaagttt
     9781 tagacagatt aaatcaaatt ttaaaacctg ccagtgaaat aaaaaacaat aacttagctc
     9841 ctttgtttaa aaattcaggc gtatttttag aagctaaatt aaaagatgcc ctaaacgaag
     9901 aattactacc caaaagtttt cactctcttt taagtacaat caaaggtctt agtagcgaaa
     9961 aactaagcgt tcagatagcc cagcttgcaa atacaaattt aagcccaaaa gacactttaa
    10021 aagaattaaa aaatattatt aattctagca aaaatgaaaa taagcaaatt ttaaatcaaa
    10081 gttcttttaa agcactttta aatttaagtt ctaaattgga aaattttaaa aattatataa
    10141 gtaaaaatcc cagtcatgct caagaaaaaa tcacccctat agctaataaa attttaaaag
    10201 aattaaattc catcaaaaat gattttttca aagctcttaa taagccagaa aatttaatga
    10261 taaaagatcc aaacatcctt aagcaaactg ctaccgcctt tgaaaaactt gaaaatactt
    10321 taaaaaatat actaggcaat caagcttcta aaatacaaga taaagaaaat attttagaaa
    10381 atcttttaag taacaaagaa aatatcaagg aagaaaaact taatcataat acaaaaaacc
    10441 aagatgaaga aaaacatata aaagcatcaa aagaagatga aaatttagat tctggtataa
    10501 aaacccatga agaagatacc caagatacaa aaaatgatat tcaaaataat gaaacagaaa
    10561 ataagccaga caatgatata aaaaattcta ctccaaacca agaaaaaatt aaagatgaaa
    10621 aacaagaaaa atcaaaagaa aatatcaaag aaaatccaaa attttatgaa acaaaaacag
    10681 aaaacaaaac ttcaatcaat acaaatacca acacttcaaa tcctaacaca aacaatacgc
    10741 aaaatttaaa taatactcaa aatattcaat ctaacaataa ccaaactatg caaaatattt
    10801 ttaaaaatca ggaatttata aaacaaaata ttgtaaaaaa tttagcattt aatgtagaaa
    10861 atttagatct agaacaagtg caagatttaa gtaaaaattt aagcaatctt tctcgtagac
    10921 ttaatgaaag cttaaaagaa cttgaaccct atactcaaaa tgccaagctt aatcaagcag
    10981 aacttaaaaa tctcgaacac aaactcaatc tttctatcaa agatctagcg caaattaaac
    11041 caaaaacaga acaagatata gctgaatctt tacatcatga tgtaaaatca acacttttgc
    11101 aaatttcaaa tttagctaaa aatgaaggca atgaagctgt atacaatcaa gctaatcgtc
    11161 ttttagcgca aattgaaatc aatcagctta tgtctttagc taatgattct atcaatactt
    11221 atctgccttt ttcttgggat gatttaaatg attctaaaat tatgtttaga cgcggaaaaa
    11281 aggacaaatt ttttgctcag attaaactcg aatttgcaaa acttggggat ttagaaattc
    11341 ttatttcttt aaataatgaa aaatatatag atattaatat tatggcagaa aatattgaat
    11401 ttagaaaaac catctatgaa aatgcccatg agcttaaaag aaatatcaat aaagcaggac
    11461 ttttaagtgc aaatttcttt gtaggtgata tcataagaag taaatttgat actagaaata
    11521 tgaaaaattt agatcttgaa atgggtatgg ataaaaaagt atgagcaaaa tcaaaagatc
    11581 gattaaaaaa gctgtagctc taggctatca aaaagaaaaa aactctgcac caaaagtgct
    11641 tgcaagtggc aaaggagaaa gtgctgctaa aattatttct ttagccaagg aacacggagt
    11701 tcctattaaa gaagatgaag atttaataga aattttaagc aagcttgact taggtgatga
    11761 aattccacct aatatgtata aagctgtagc tgaagttttt gcctttatct atcaaatggc
    11821 aaataaaact cctaaaaact aatccgctat tttttctcca aatttaatac cctgccctac
    11881 ttttaaatta aaagttaaaa gtcctttttg agagattaaa actatagtag aacctagctc
    11941 aaaatttcct agttcttcgc cttttttgaa atttaaattt tcatattttc tagtaaaatt
    12001 atgagaaatt ttagcattgg tttgtatgct tgcatcaaaa ttaaaacgca tttttcctac
    12061 attttgcgct cctacaaaaa caagccaaaa aatacctttt tcattttgac atttcaagct
    12121 cactctttca ttttttacat ataaattact aatgcattct aaatgttttt catttacgct
    12181 ataaagcact ccacttgtgt aagttgcact taaaatttgc atatcacaag ggctgtgata
    12241 acgatgataa tcttttggag aaagataaat attgacataa tcaagcccat ttttaagttc
    12301 atctttttca aagctatctt ttaaaagctc ctcaacgcta taagcatgtc cttttataga
    12361 aaaagcaaaa tgttcttcat ttgctaaaaa agtacttcca cactctaaaa ttttaccatc
    12421 acttggactg ataaaacctt cttcaaattt tcttggaatt tgtaaagttc ttgtaaaaag
    12481 agcatttaaa ctctcatatt cacaaggagc tttaaattca ctcatattga tattaaaata
    12541 cttaacataa ttttcattaa taactttttg tatcatttta ggaaatttaa tccccgctac
    12601 aaaaccaaaa agtctcgaac tttcttttga aaaactcatt tttttccttt taaatttaaa
    12661 atcactattt cactcggagc aaaaactcta agacttggcc cccaaaatcc tgctccacta
    12721 ctcacataaa gcttagtttt ttctcctaaa tcataaagcc cataaacaaa accttgctga
    12781 agtttaacta aaaacataaa agggaaaatt tgccctccat gtgtatgccc acttaaaaca
    12841 agatcaaaat cacttaaatc ataaagcaaa gctgttttag gttgatgtgt gagtaaaata
    12901 ctagctttgc ttgtatttaa atccactttt attcttgcta aatcaggagc atataaaccc
    12961 ctatcaagtc cggctaaatc tccaagtcca gcaatattta taaaacccaa atctaaattt
    13021 tgattgacta aaattttcat attagtatgt tttctaagta aatccaaaac ttcattgata
    13081 ccatgataat actcatgatt tcccaaagca taaaaagttc cgtaagtgga gttaaaatca
    13141 ttaagttttg agatgtaatt ttttaaatct ttaggattag tatcaatcag atcccctact
    13201 attacaacca tatcaggact ttgcaaattc actttagtga tgagcttgtc taaaaaattt
    13261 tcatgcaaat ttttacccaa atgtatatca gtaagcatgg caatttttaa atcttgttta
    13321 agatttggta tttcaacatc aacactcttt acttcaggtg tttttagagc attatttata
    13381 cttgcataaa ttaaaaacac acttaaaact ataagagaaa gttcaaaaat caaacgcaaa
    13441 ataagattat atgttttatc tcttttaccc ataagagcta aaatcaattt aacaaaatcc
    13501 caagctaaag tcataaaaaa caaacaataa gtcggcgcat aaaacatggc taaaatttca
    13561 taccaagtat cacttaaata ttcatctcta cgaaatatta aaaacacagc ttgagctaaa
    13621 aaaagcacaa taaaaataaa ggaaaaaatt ttataaaaat acttaaaaag agtaattttc
    13681 ttgattaatc ttttataaat ataaacattt gctaagccaa aaatcaataa cacaatgaaa
    13741 gaaaaaatta aaaatatcat aaaagtatta taaccaagta aaattaaata tccgtataaa
    13801 tttttctgtt ataataagct tttaaataat tttaaaggct ataagatgta ccgttttgca
    13861 ccttctccca caggtgatat gcacatagga aatttacgcg cagcaatttt taattatatc
    13921 tgtgcaagac aaaaaaatat ggattttatc ttacgtattg aagatactga taaggctaga
    13981 aatatagcag gaaaagaaga agaaatcaaa gaaattttaa atctttttag tatttcatgg
    14041 cagcattact atatacaaag tgaaaattta aaattccatc gccaaatggc tttaaaactt
    14101 gtaagcgaaa aaaaagcttt tgcttgtttt tgcaccgaag aagaacttga agcaaaaaaa
    14161 gagctggcta aaaaacaagg taaagcttat cgctacgatg gcacttgtga aaaactagcc
    14221 gatattgatg ttttagaatg tgaaaaaccc tttgttatcc gtcttaaaaa acctactcat
    14281 actatgaaat ttactgattt tatcaaaggc gagcttagtt ttgagcctga aaacatagac
    14341 tcttttgtga ttatgagaac ggataaaact ccaacttata attttgcttg tgcggttgat
    14401 gatatgcttg aaaatgtcac ttgtattata cgcggagaag atcatgtttc aaacactcca
    14461 aaacaagaac atatccgcgc aagcttaggt tataataaag ccatgactta tgcacacttg
    14521 cctatcattt taaacgaaga aggtgttaaa atgagtaaaa gagaagcaca ttcttctgta
    14581 aaatggctac ttgaaagtgg aattttacct agcgcaatcg cgaattatct tgtcatacta
    14641 ggcaataaaa ctccttgtga aatttttacc ttagaagagg ctataaaatg gtttgatatt
    14701 tctaaagttt caaaagctcc cgcaagattt gatcttaaaa aactcttaca aatcaatcgt
    14761 gaacatatca aaatgatcaa agatgatgag cttaataaaa ttttagattt aaacaaagat
    14821 cttgcacaac ttgctaaatt ttatactcaa gaaacaagta ctataaaaga acttaaagaa
    14881 aaaatgcaag ctatttttaa cgcaaaagat tttggcgagt ttgaaacaga atgtaaaatt
    14941 ttaaaagaac tcttaaaaga tattgaactt tttgaaaatt atgaagattt taaaaatgaa
    15001 cttttaaata aaagcaactt aaaaggtaaa aaatttttca tgcctttaag gataatttta
    15061 acaggaaata tccacggacc tgagcttagt gatctttatc cttatattaa aaattttatt
    15121 cacgaattag caaggattta actatggtta tagactcttt tattatttct atttttcaag
    15181 tacttcaaat tgtcattaac atttatactt ggattattat catcacagca cttttaagct
    15241 gggtaaaccc tgatccttat aatcccatag tgcaaatttt atataaacta agctaccctg
    15301 cttacgcctt agttagaaaa attccaacac gcattggtaa tattgatctt gcgcctttga
    15361 ttatagtctt agcattgcag tttcttggca tttttcttgg gaatatctta aggagtatat
    15421 tgtgataaaa aaaatactcg tttttttatt tattttttca agtttaaatg ctacacaata
    15481 tagtatagaa aaactcaaaa aggaagaaaa ttcacttgct aaggattatt atatttatag
    15541 gcttttagaa aaaaataaaa tcagtaaaaa agatgcacag gatttaaatt ctcatatttt
    15601 tcgctatata ggaaaaatta aatctgaact tgaaaaaatc atccctttaa agccttatat
    15661 caacccaaaa tatgctaaat gctataccta tatagcaaat actatcttag atgcaaattt
    15721 aacttgtcaa agtgtgcgct taaattcatt agtttttata gcgagtctaa attccaaaga
    15781 ccgaactact ttagctcaaa cctttaaaaa tcaaagacct gatttgacaa atttattgct
    15841 agcttttaat acttctgatc ctatgagcta tatagtacaa aaagaagata ttaatggttt
    15901 ttttaaactt tataattatt ctaaaaaata cgacttagat ttaaatacaa gtttagtcaa
    15961 taaactacca aaccacattg gttttaaaga ttttgcacaa aatattatta ttaaaaaaga
    16021 aaatccaaaa tttagatatt ctatgctaga aataaatcct gaaaatgtaa gtgaagattc
    16081 tgctttctat ttaggagtca atgccttaac ttatgataaa acagagcttg cttatgactt
    16141 ttttaaaaag gcggcacaaa gttttaaatc gcaaagtaat aaagacaatg ctatattttg
    16201 gatgtggttg attaaaaaca atgaagaaga tttaaaaact ttatcgcaaa gttcttcttt
    16261 aaatatttat agtctttacg caaaagaact taccaacaca ccttttccaa agatagaaag
    16321 ccttaatcca agcaagaaaa aaaataattt taatatgcaa gatccttttg cttggcaaaa
    16381 aataaacaaa caaattcgcg atgctaacgc aagtcaacta gatgtcttgg caaaagaatt
    16441 tgacacacaa gaaaccttgc ctatttatgc ttacatatta gaacgcaaaa ataattttaa
    16501 aaaacattat tttataatgc cttattatga taatataaaa gactataaca aaacaagaca
    16561 agctttaatt ttggctattg ccagacaaga aagtcgtttt attccaactg ctatttcagt
    16621 ttcttatgct ttaggcatga tgcaatttat gccattttta gccaatcaca taggggaaaa
    16681 agaattaaaa attccaaatt tcgatcaaga ttttatgttt aaacctgaaa tagcatatta
    16741 ctttggaaac tatcatctaa attaccttga atcacgttta aaatctccac tttttgtcgc
    16801 ttatgcttat aatggcggta taggatttac taaccgtatg cttgcaagaa atgatatgtt
    16861 taagacaggc aaatttgaac ctttcttgtc tatggagcta gttccttatc aagaaagccg
    16921 aatttacgga aaaaaagttc tagctaatta tattgtgtat cgacatcttc tgaacgatag
    16981 tataaagatt tcggatattt ttgaaaattt aattcaaaac aaggcaaatg atctaaacaa
    17041 atcttagcta caagcctaat ctcttccttg acactaggaa gagatacttt aaaataatca
    17101 gtatagttgt tttgtattat atattttaaa tactcatcat ccaatttttc aatattggct
    17161 tttttattat tgataaaaac ttctaaattt tgaattttta atgtatttgg agtaaaagat
    17221 aaagctaata catcatcttt acttgtcttg tctagaattg ggtttaaata agacatagtt
    17281 ataatggcat taatcttatc ttgtgtgatt ttgtattttt gagtaaacat taaagtttga
    17341 gattttaaat ttgtatccac aatcgcctga tcttttaaag aacaagctcc aagcaaaaaa
    17401 gcacctaaaa ttacactata aattttcatt ctttttccat attttttagt attattgtag
    17461 ccttttaacc ctattttttg gtttaaaaag atataatttt gcaaaaaaat taagagtata
    17521 ttttatgaaa caacttatta tagcttttag cgggccttca aattcaggaa aaactacact
    17581 catcactaaa atagctgata attttttgca acaaaattta aaagttttaa tcattaaaca
    17641 tgaccctgcc gataaagctc aatttgattt taacggtaaa gatagtttta aattttttca
    17701 aagtggagct gaagtcatgg ttttaagccc tacaagaaca actttttttt ctcatgaaaa
    17761 tagagatatt ttaaaagctt taaaattaag ccctgatttt gacatttgtt tggttgaagg
    17821 attaaaaact cttgatttac cacgcattag cgtattttgc aaagaaattg atgaaagtta
    17881 ttttattttt tcaaacgcca ttgcaagcta tgaaaaaatt tctcaccctt atcttacttg
    17941 gcttgattta aacgatatac aagctatttg ccaatacata cttaaaaatg ctaaaaattt
    18001 acaaggagaa ttataaaatg caagaagtga tttcttatat acaaaaagcg gttttagaaa
    18061 tttctaacgc tttaaaattt cccgatacaa gctacagtca aaatcaaaat tttacaggcg
    18121 atacccaact caaatttgat gttttaagtg atgaaattat cacaaaaacc ctaagtcaat
    18181 gttcaagtat taaagccatc atcagtgaag aaaaagatga aattttaacg cttaacgaga
    18241 gggcaaattt tatcgtagct tatgatcctt tagacggttc tagcttaatg gatgttaatt
    18301 ttgccatagg ttctattttt gctatctatg aagaaaaagc aagtgctaaa aatttaagag
    18361 ctgcgcttta tagtatgtat ggagcgcgat tagaacttgt gatttgcaaa gatcagccaa
    18421 aactttatcg cttaaatgca aataatgaat ttatttttat aaaagatctt agaatgaatg
    18481 aaaaaggcaa gattaatgct acaggcggaa cgcaaaaatt ttgggaagaa aaacacgcta
    18541 aatttatcaa aagtcttttt gatgaaggct atcgcttaag atattctgga gccatggtaa
    18601 gcgatatcaa tcaaatttta ttaaaaaggg gtggcatttt tagctatcct gcaacacaag
    18661 atgcgcctaa tggcaaactt cgtgcctttt ttgaagtctt tcctctagcc tttatcatag
    18721 aaaaagcagg cggaaaaact acaaatggaa aaaaccgctc tttacttgaa cttgaatttg
    18781 ataaaatcca tgcgacaact ccttgttttt ttggctcaga atatgaaatt tcaaaacttt
    18841 taaaggctta caatgaatga agttagagat gaatttgagc aagatatgga taaaaaaaaa
    18901 gaaattttac tttcatgtca aaactcaaaa aacctaaact cttgttataa ttgcgatgaa
    18961 atttttaact gccaaactag aaaaaattat gttgatgcag tctataacag tatgtctaag
    19021 ggtaaaaccg aaggcggatt tgacttttaa aggaaaaaaa tgcgttatat tacaacacca
    19081 atttattatg taaatgatgt acctcattta ggtcatgctt atactaccat catagccgat
    19141 actttagcaa gattttatcg tttgcaagga catgaaacaa gatttctaac aggaacagat
    19201 gagcatggac aaaaaatcga agaagctgcc aaactaagaa attccactcc tcaagaatac
    19261 gctgataaaa tcagttttga atttaaaaaa ttatgggatg aatttgaaat cacctatgat
    19321 atttacgcaa gaacaactga tacaaggcat attgaattta ttaaagctat gtttttaaaa
    19381 atgtggcaaa aaggtgatat ttataaagat gaatacgaag gacactattg tatttcttgt
    19441 gaaagctttt ttactcaaag tcagcttatt aacgattgtt cttgcccaga ttgtggcaaa
    19501 caaactagaa ttttaaaaga agaaagctat tttttcaaac tttcaaaata tcaagataaa
    19561 attttacaat ggtatgaaga aaaagatccc atcttgccaa aaaacaaaaa aaacgaactt
    19621 ataaattttg tccaaaacgg ccttaaagat ctttccatta caagaacaag ttttgattgg
    19681 gggattaaac tgcctcaaga aattaatgat gataaacata ttatttatgt atggcttgat
    19741 gcacttttta tctatgtaag ctcacttgac tttcaaaaca agggagaaaa tgctaaattt
    19801 tggcctgcgc atgtgcattt agtaggaaaa gatatcttgc gttttcatgc catttattgg
    19861 ccagcttttt taatgagcgt ggatttgcct ttgccaaaat ttataggtgc acatggctgg
    19921 tggactaaag aaggtgaaaa aatgagcaaa tctaaaggca atgttgtaaa acctaaagaa
    19981 gtagttgatg cctatggaag tgaagctttt agatatttct tgcttagaga agtgcctttt
    20041 ggtaacgatg gggattttag cgaaaatatg ctgataaatc gtatcaatgc agagcttagc
    20101 aatgaatttg gaaatttact taatcgcatt ataggtatga gtacaaaata ttctcaagga
    20161 aatatttcaa aagaaggtgt tttaaaattt tacaatgccg aactaaatca agcaaaagaa
    20221 cacttaaatt tagcggtaga atttttagaa aacttacagt gtaatcgtta tttagaagaa
    20281 ctttttaaag ccttaagtgt ggcaaattta gccattagta aatacgaacc ttggagttta
    20341 atcaaagaaa acaaacacga acaagctaat gctttagtag cactttgtgc aaatatttta
    20401 gccaaaacaa gccttttatt aagccctact ctaccaaagt cctctcaaaa ggtggcctta
    20461 gctttaaatt ttgaaatttc gtctgcaaat tacacaaaaa tgatacttga taatgaactt
    20521 ttagatttta aagcaaatcc ttgcgaagct ttatttccaa aagtagaaaa agctctttta
    20581 aaacaagaaa ttaaagaaga acctaaaaaa gaagaaagtc ctaaaataaa aatcgatgat
    20641 tttgcaaaaa ttgaaatcaa agttgctaag gtacttgatt gtcaaaatat agaagggagt
    20701 gaaaaacttt taaaatttca actcgaactt gacgataaag aaatccgtca agtactctca
    20761 ggcatagcaa aatactataa ggccagtgat ttaatcggta aacaagtttg cgttataagc
    20821 aatcttaaaa aagctaaaat ttttggacat gaaagcgatg gtatgatact ttctgcaaaa
    20881 agcggagata aacttgtttt aatcgcccct gaacaacttg tgcaaaacgg ctctttagtg
    20941 ggttaaaata tgcaaattag caatttaggc gaactgttaa acgcaacact aattcatgaa
    21001 ggtagtgttt taagcgtgga aggttttgcc ataaatttaa acgaacttaa aacaggcttt
    21061 gccttcttta ataacgataa aaaagaaatt gcccaagctg taaaaaaagg cgcttatgct
    21121 ataattacag aaaatgacat tactattgaa gataaagaaa ttttttactt tagagtagaa
    21181 aatctagaac gagctcttgt aagattttta cgcttttttt gcgaagataa agaatgtgaa
    21241 tttttacttt ttaaatctta cgaactaagt ctttgcaagg ctttttattt taacatttta
    21301 aaaggaaata tttttgctga ttttgaaaaa ctaatcaaag caaaaaaggg tgaaattttt
    21361 tgctactgtg aagaaaatta cttaaataaa ctttgcacct attctcatag tctaaaagat
    21421 gctaatttta ccttattatc gcgatctagc ttctttttta caactttgat ttgtgaaaat
    21481 ttatatttta aaaatcttaa tttgcctttt ttttacgcaa atagttttgc aaaaattatt
    21541 tcttttttaa aagaaaaaag tcaaaaaata atatttgact ttaataagat tgatgatttt
    21601 aaaatttatt ttattgatga taaatttgaa atcactcctt ttggttcaag ctctcaagcg
    21661 tttattgtaa gcaacaacca aaataccttt gaattctg
//
LOCUS       DAPIVO010000028        21064 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.028, whole genome shotgun sequence.
ACCESSION   DAPIVO010000028 DAPIVO010000000
VERSION     DAPIVO010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21064)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21064)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21064
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.028"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            15..908
                     /gene="msrP"
                     /locus_tag="RJ239_000922"
     CDS             15..908
                     /gene="msrP"
                     /locus_tag="RJ239_000922"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HDV7331050.1"
                     /translation="MLITPEKLYKQRRNFLKLGAGALISSSVLASKLSALNFTSDTNP
                     NKLEISDEELATNYVNFYEFSTDKRKAVSLAQNFNTQNWKIDISGEIEKPLTLSMEDI
                     LKFPLEERIYRFRCVETWSMVVPWVGFELRRLIEMAKPTSEAKFVKFTTLLDKSQFPD
                     QDALFPTIDYPYVEGLRMDEAMHPLTLLAVGMYKKALKPQNGAPIRLVVPWKYGFKSI
                     KSIVKIKFTKEQPKSTWESYAPSEYGFYANVNPNVSHPRWSQANERALGDFFTKPTLM
                     FNGYEKEVASLYKNMDLKVNF"
     gene            908..1480
                     /locus_tag="RJ239_000923"
     CDS             908..1480
                     /locus_tag="RJ239_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase heme-binding subunit YedZ"
                     /protein_id="HDV7331051.1"
                     /translation="MQTKYFKFLAYFSFIISLIYGFYHIIKAFDFVKEAYIYTGIFAL
                     IFLNLSLLFSLLKFKKTRNYPKILGIFAAFWAILHFLNYFIFDRNAQILRLFDDISHR
                     LLEASGFIAFLIIFLMLLSSFKIFKKLSKIRKLGYLCLVLASYHYFLTPKIPMFWEWS
                     ALIIALFYFIVRYTKTLKKLKSNNLTFIKT"
     gene            complement(1445..3157)
                     /locus_tag="RJ239_000924"
     CDS             complement(1445..3157)
                     /locus_tag="RJ239_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7331052.1"
                     /translation="MEKLKNFLILKNIEDTQIYKELKCAKNEALILRELCRNYVVSIS
                     SINAFTLLSTIFGNDKYLYLDALEDLKKLIERGFVNQNSSFFKSLENNKTQTLTLALL
                     QSELSLSEYFLEFLEAKPRLNFEKQEAYADYLEYLKDEFARIQLYERLSFIQKSAYNS
                     EIKNQIKLYERHIKERLKKSKFYNVLADIFKEYNLEHKEQIIFLALLKEEYALSNESS
                     ISREMNSLLSLISENDLERHKNKKLLQENAPLLNLIECDEYLNAFGDISKSFFIIDEI
                     LQRIINFEPKQSKKIKIESVLKDQDIFELIEPSTDINDIIMPENTKELLENILKQQDK
                     KVLERLHSWGIKSNKNIEAKIIFYGPAGTGKTMSALAMAKSMKKSVLSFDCSKILSKW
                     VGESEQNVRKIFDTYKNIVQTCKQSPILLLNEADQFLSTRVDGSSGSDKMHNQMQNIF
                     LEQIERFSGVIIATTNFLESLDSAFSRRFDYKIEFKKPDFKDRLKIWEKFLPKKALFE
                     KDFDINILSNYELSGAQILMVVKNTALKVAVSKDGVFKMQDFIESIQKELNSSFDKSK
                     IVGF"
     gene            complement(3157..3981)
                     /locus_tag="RJ239_000925"
     CDS             complement(3157..3981)
                     /locus_tag="RJ239_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331053.1"
                     /translation="MKFFLLVFCFVNLALAKVYKGELHFYHLQDKEIFAIVYDNAPMT
                     PLFDRDKNQTSSSFLIVDDINGNLEIPLVKINDFWQDERKKYKINSSKMLTYDNKNFQ
                     GENLGTTTLELVETQDGIRIKRSLDFIGFNDDFKEFHPVHKGVFSFEQIRQKPIFLQD
                     GKISFEEWYYFYEDGMSRAILELNNFVYDINAHAFVKLNDLYNTENQKFQNLLHEKLK
                     NTCDECFEDLQNLQFNNNFLLNNGKLKICYLPFEGHFLDENICVEFNEDELKEFKK"
     gene            complement(3992..4468)
                     /locus_tag="RJ239_000926"
     CDS             complement(3992..4468)
                     /locus_tag="RJ239_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7331054.1"
                     /translation="MKHCLALCFVFFLCACSVKNQNFSSQSLMVLIASPMIKINDTAF
                     LKKENNALNLEVYKLGQAFFELKIKDKICINAVCYDKQVFNQKFFKNVYYDDILSDIL
                     KANPLWQGKNLEKTDCGFEQNLKAKNYEIFYQVCDNKVSFFDKISHTKIILTHIQN"
     gene            complement(4477..4968)
                     /locus_tag="RJ239_000927"
     CDS             complement(4477..4968)
                     /locus_tag="RJ239_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HDV7331055.1"
                     /translation="MASEHSFDISAALDKQELKNAFEQAKKELDSRYDLKGIKCEIDL
                     SEKESIFKLSSSSEGKLDVLKDIVISKLIKRGINPKAIKELSRESGAMFRLNLKANDA
                     IDSENAKKINKVIKDSKLKVNSSIRGEEIRVAAKQIDDLQAVMKLVKELDLELNISFK
                     NLK"
     gene            complement(4958..5893)
                     /locus_tag="RJ239_000928"
     CDS             complement(4958..5893)
                     /locus_tag="RJ239_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HDV7331056.1"
                     /translation="MKIVCLDAATLGDYDLSVFEKFGSLQIYTTTNKEQTIERLKDAN
                     VAMTNKVVIDKDVIDACKNLKLILETATGVNNIDIEYAKEKGIIVKNAAGYSTMSVVQ
                     HTFAFMFAFLNQVLYYDKWSKEGKWCESPIFTDYSRILNTLSGKKHGIIGLGTIGKEV
                     AKISKAFGAEIYYYSTSGANKNADFVHLELKDLLKTCDIISIHAPLNEKTKNLLAFEE
                     LKLLKDNAILINVGRGGIVNENDLAKIIDEKNIRVGLDVLEIEPMMKNHPLLSIKNKE
                     NLIITPHVAWASKEALNALMDIVYNNLKEWIENGK"
     gene            complement(5896..7065)
                     /locus_tag="RJ239_000929"
     CDS             complement(5896..7065)
                     /locus_tag="RJ239_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HDV7331057.1"
                     /translation="MQLLQVDKLQKDYLENIGFSWHTDEDGSDYISNKLVCVKESEAN
                     AYYEAVNELYDMFIAAAQEVINNDRFDELGIPFNLIDAIKMSWENEVHWHLYGRFDLA
                     GGLDGKPIKLIEFNADTPTALFESAILQWALLKQNGMDESAQFNSIYESLMDNFKRLI
                     TLDESVEGFEEHYQGWKILFSSVAGSKEEEITTKLLAHIANEAGFQTNFSFVDEVEFS
                     EEGIFKEGENYEYWFKLIPWEDIAIEEGELAMLLTQIMRNQRAIILNPAYTLLFQSKG
                     ILKILWELYPNHPLLLETKDTPLEGKNYVKKPVFGREGANISIIKDGKTLHENVGPYG
                     NNKAIYQEYVEFNSCENEYYQAGVFFAYEGCGLGFRKGGLVLDNYSKFVGHIIKD"
     gene            complement(7075..7680)
                     /locus_tag="RJ239_000930"
     CDS             complement(7075..7680)
                     /locus_tag="RJ239_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0323 family lipoprotein"
                     /protein_id="HDV7331058.1"
                     /translation="MKKIKKIIQIGMIGGLAAVAGGALAGCGSNNDNADTLNQAANAQ
                     GAFVIIEETAPGQYKIKDQYPSDETRVVLKDLNGTERILSKEEMDALIKEEAAKIDNG
                     TSNLTKDNGQISSGGLSLGETLLASAAGAILGSWIGSKLFNNQNFANQQRGAFSNQSA
                     YQRSVNSFNKAGTTSSASSAKKSGFFGGGSKATSSSSSFGS"
     gene            complement(7800..8012)
                     /locus_tag="RJ239_000931"
     CDS             complement(7800..8012)
                     /locus_tag="RJ239_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HDV7331059.1"
                     /translation="MPGIKVHPNESFDEAYRKFKKQVDRNLVVTEVRARRFFEPMTEI
                     RKKQKISARKKMLKRLYMLRRYESRL"
     gene            8172..9548
                     /gene="ccoG"
                     /locus_tag="RJ239_000932"
     CDS             8172..9548
                     /gene="ccoG"
                     /locus_tag="RJ239_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HDV7331060.1"
                     /translation="MQGHITNYTKKRYFVYLIASIIIFSLPFIRINENHFFLLSFDHS
                     KLNLFFISFSTQEFYLMPFVLIFLFLFIFFITTLGGRIWCAWSCPQTIFRVIYRDIIQ
                     TKFLKIRKNINNKQKEYERQYFKKFLGVIIFYFISLVAVSNLLWYFIPPEDFFNYIQN
                     PGEHLLLLGILFCASLLFTLDITYLQEKFCVYVCPYARIQSVMFDHDTMQVIYDEKRG
                     GLIYDGHTKLHKKPPEGECIGCEACVSICPTHIDIRKGMQLECINCLECADACSKVQS
                     KFNRPSLINWTSAKAIETRSKVHYLRFRTIAYFIVLLIALLALIIMGSKKESMLLNIN
                     RSSELYNISNVKGELVISNAYTFLFQNTDSKPHEYYFTANLEGINDGIEIIRPNKPFK
                     LKAGEQVKKIVVIRATKNLANNDKKDVIFPLHIKAYAKDNEKISVFRKSIFVYPKSTL
                     IKDKNELK"
     gene            9535..10167
                     /gene="cmeR"
                     /locus_tag="RJ239_000933"
     CDS             9535..10167
                     /gene="cmeR"
                     /locus_tag="RJ239_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     regulator CmeR"
                     /protein_id="HDV7331061.1"
                     /translation="MNSNRTPSQKVLARQEKIKAVALELFLTKGYQETSLSDIIKLSG
                     GSYSNIYDGFKSKEGLFFEILDDICKKHFHLIYSKTQEIENGTLKEILTSFGLAFIEI
                     FNQPEAVAFGKIIYSQVYDKDRHLANWIENNQQNFSYNILMGFFKQQNNSYMKKNAEK
                     LAVLFCTMLKEPYHHLNVLINAPLKNKKEQKEHVEFVVNVFLNGINSSKA"
     gene            10262..11365
                     /gene="cmeA"
                     /locus_tag="RJ239_000934"
     CDS             10262..11365
                     /gene="cmeA"
                     /locus_tag="RJ239_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit CmeA"
                     /protein_id="HDV7331062.1"
                     /translation="MKLFQKNTILALGVVLLLTACSKEEAPKIQMPPQPVTTMSAKSE
                     DLPLSFTYPAKLVSDYDVIIKPQVSGVIENKLFKAGDKVKKGQTLFIIEQDKFKASVD
                     SAYGQALMAKATFENASKDFNRSKALFSKSAISQKEYDSSLATFNNSKASLASARAQL
                     ANARIDLDHTEIKAPFDGTIGDALVNIGDYVSASTTELVRVTNLNPIYADFFISDTDK
                     LNLVRNTQNGKWDLDSIHANLNLNGETVQGKLYFIDSVIDANSGTVKAKAIFDNNNST
                     LLPGAFATITSEGFIQKNGFKVPQIAVKQNQNDVYVLLVKNGKVEKSSVHISYQNNEY
                     AIIDKGLQNGDKIILDNFKKIQVGSEVKEIGAQ"
     gene            11365..14475
                     /gene="cmeB"
                     /locus_tag="RJ239_000935"
     CDS             11365..14475
                     /gene="cmeB"
                     /locus_tag="RJ239_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit CmeB"
                     /protein_id="HDV7331063.1"
                     /translation="MFSKFFIERPVFASVVAIIISLAGAIGLTNLPIEQYPSLTPPTV
                     KVSATYTGADAQTIASTVASPIEDAINGADNMIYMDSTSSSSGTMSLTVYFDIGTDPD
                     QATIDVNNRISAATAKMPDAVKKLGVTVRKTSSTTLAAISMYSSDGSMSAVDVYNYIT
                     LNVLDELKRVPGVGDANAIGNRNYSLRIWLKPDLLNKFGITATDVISAVNDQNAQYAT
                     GKIGEEPVTQKSPYVYSITMQGRLQNPSEFENIILRTNNDGSFLRLKDVADVEIGSQQ
                     YSSQGRLNGNDAVPIMINLQSGANALHTAELVQAKMQELSKNFPKGLTYKIPYDTTKF
                     VIESIKEVVKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSI
                     NLLTLFALILAIGIVVDDAIIVVENIDRILHENEQISVKDAAIQAMQEVSSPVISIVL
                     VLCAVFVPVSFISGFVGEIQRQFALTLAISVTISGFVALTLTPSLCALFLRRNEGEPF
                     KFVKKFNDFFDWSTSVFSAGVAYILKRTIRFVLIFCIMLGAIFYLYKAVPSSLVPEED
                     QGLMIGIINLPSASALHRTISEVDHISQEVLKTNGVKDAMAMIGFDLFTSSLKENAAA
                     MFIGLKDWKDRNVSADEIAMELNKKFAFDRNASSIFIGLPPIPGLSITGGFEMYVQNK
                     SGKSYDEIQKDVNKLVAVANQRKELSRVRTTLDTTFPQYKLIIDRDKLKHYNLNMQDV
                     FNTMNATIGTYYVNDFSMLGKNFQVNIRAKGDFRNTQDALKNIFVRSNDGKMIPLDSF
                     LTLQRSSGPDDVKRFNLFPAAQVQGQPAPGYTSGQAIEAIAQVAKETLGDDYSIAWSG
                     SAYQEVSSKGTASYAFALGMIFVFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLR
                     GFSNDIYFQTGLLLLIGLSAKNAILIVEFAMEERFKKGKGVFEAAVAAAKLRFRPIIM
                     TSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVPLFFYLLENFNEW
                     LDKKKR"
     gene            14481..15959
                     /gene="cmeC"
                     /locus_tag="RJ239_000936"
     CDS             14481..15959
                     /gene="cmeC"
                     /locus_tag="RJ239_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit CmeC"
                     /protein_id="HDV7331064.1"
                     /translation="MNKIISISAIASFTLLISACSLSPNLNIPEANYSIDNKLGALSW
                     EKENNSSITKNWWKDFDDENLNKVVDLALKNNNDLKLAFIHMEQAAAQLGIDFSSLLP
                     KFDGSASGSRAKTAINAPSNRTGEVSYGNDFKMGLNLSYEIDLWGKYRDTYRASKSGF
                     KASEYDYEAARLSVISNTVQTYFNLVNAYENENALKEAYKSAKEIYRINDEKFQVGAV
                     GEYELAQARANLESMALQYNEAKLNKENYLKALKILTSNDLNDILYKNQSYQVFNLKE
                     FDIPTGISSTILLQRPDIGSSLEKLTQQNYLVGVARTAFLPSLSLTGLLGFESGDLDT
                     LVKGGSKTWNIGGNFTLPIFHWGEIYQNVNLAKLNKDEAFVNYQNTLITAFGEIRYAL
                     VARKTIRLQYDNAQASEQSYKRIYEIAKERYDIGEMSLQDYLEARQNWLNAAVAFNNI
                     KYSYANSIVDVIKAFGGGFEQSEDTSKNIKEESKNLDMSFRE"
     gene            complement(15982..16233)
                     /locus_tag="RJ239_000937"
     CDS             complement(15982..16233)
                     /locus_tag="RJ239_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331065.1"
                     /translation="MDKAKIVQNLNALFKQRAEFYSYFDENIAKINNTEVFDFKNAKN
                     LNPEEVYKQFYHFDYAIRKLLPAIYKAYEITDADLDKDF"
     gene            16362..17708
                     /locus_tag="RJ239_000938"
     CDS             16362..17708
                     /locus_tag="RJ239_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HDV7331066.1"
                     /translation="MNLFQNLALKYSHTMMEKSLQKGFNVELLKQPEEKIPKQDKSYM
                     LYAHVPFCHTFCPYCSFHKYYYDENLAKVYFQNLREEIKIMKNKGFDFTSMYVGGGTT
                     LIDEEELLKTLELCKKLFNIKEISCESDPNHIDPNKLSMFKGIIDRLSCGIQSFDDET
                     LKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQNEKQLLNDLEIAKNLAP
                     QQITTYPLMKSNLTKDNIAKSLGVSIKDNEFTYYQIIREFFKDYTQNNGWSFSLEKNK
                     LNDEYVSSHHEYLGVGSGAFSFLDGELLINAFNLNDYAKFIQEKQNANIAKACFDKKE
                     IIKYVFLTEIFSGKIEIDKFNKTLNCNLEKELFIELLGLKTSGAIIKDQNALIATEFG
                     QYLFVVLMKDFYTGMDLVRAVFRDDKRLKNKDYIDIMKENIDPLNSASMEFKAETN"
     gene            complement(17705..18157)
                     /gene="hemJ"
                     /locus_tag="RJ239_000939"
     CDS             complement(17705..18157)
                     /gene="hemJ"
                     /locus_tag="RJ239_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase HemJ"
                     /protein_id="HDV7331067.1"
                     /translation="MTEWINDYYFWIKWVHYLAFVSWMAGLFYLPRLFVYHAEHKDNK
                     GFVEVVKIQERKLYYYIQTPAMIVTLITGSLMLHAHKEVLMVGAGFMHVKLTCVTLLI
                     IFHIHNYYCLKALANDTSTKSGKYFRIYNEFPTIMFIIIALMMVVRPF"
     gene            complement(18141..18611)
                     /locus_tag="RJ239_000940"
     CDS             complement(18141..18611)
                     /locus_tag="RJ239_000940"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HDV7331068.1"
                     /translation="MAKTFKFIFYFWGAFVLVFALDQWVKSLTLAGFRWQSEYLDLTY
                     ALNTGVAFSMLSFLEHNLKYLHLALIGVLFIYLFWQRTLLKTHSIAFGMMLGAGVSNL
                     LDRFIHGGVVDMFFWHKWFNFAIFNVADVMINISVALILIQEIFKKRKKDDRMD"
     gene            complement(18604..19941)
                     /locus_tag="RJ239_000941"
     CDS             complement(18604..19941)
                     /locus_tag="RJ239_000941"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HDV7331069.1"
                     /translation="MRLFGTDGVRGKAGEFLDSFLAMRLAMAAGIYFKDKSITNNILV
                     GKDTRRSGYMIENAIVSGLTSIGYNVIQIGPMPTPAIAFLTEDMRCDAGIMISASHNP
                     YYDNGIKFFDAHGNKLSEDIEKKIEEIYFDDKLIQASKVDMEKIGQAKRIDDVIGRYI
                     VSIKNSFPKDLTLKSLRVVLDVAHGAAYKVAPTVFKELGAEVIVMSDKPNGLNINENC
                     GALHPVNLAAEVKRLRADVGFAFDGDADRLVVVDEKGEVANGDSLLGVLALYLKEQGK
                     LQSSVVATIMSNGALKEFLNKHGIELDTCNVGDKYVLEKLKANGGNFGGEQSGHIIFS
                     DYAKTGDGLIAALQFSALMLSKKKSASSILGQVKPYPQLLINLKIAEKKDLDKIKGLK
                     ELKKDLENKNINTLFRYSGTENLIRLLLEARDIKLLEKEMKNVVEFFKKALNG"
     gene            complement(20035..21060)
                     /locus_tag="RJ239_000942"
     CDS             complement(20035..21060)
                     /locus_tag="RJ239_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HDV7331070.1"
                     /translation="MKVKALLIASLVAFSSLNAASLIDEAKNSGLVALPKDQKGVDEI
                     LKQNGVKASEFTLEKAELGKKLYFEPRLSKSGIISCNTCHNVGLGGTDGVSTAIGHKW
                     TANPHHLNSPTVYNAVLNNTQFWDGRAGTLADQAKGPIQADPEMATPAKLAVEKISSL
                     PEYVSEFKKIYGKSGVNFDNIADAIANFERTLITPSRFDKFLEGDEKALTKEEQKGLK
                     LFIDKGCVACHNGVNLGGNMQAFEVAGKYKFANLGDFKGDANGMVKTPTLRNVAETAP
                     YFHNGAIWNLKDAIKEMGSVQLGIKISDKEAKSIETFLKSLTGTKPAIVYPQLPISTE
                     KTPKPEL"
BASE COUNT         7376 a         3450 c         2880 g         7358 t
ORIGIN      
        1 aataaggaaa aattatgctt ataacacctg aaaaacttta taaacaaagg agaaattttt
       61 taaaacttgg agcgggtgct ttaataagtt caagcgtgct tgcttctaaa ctatctgctt
      121 taaatttcac aagcgatact aatccaaaca aacttgaaat cagcgatgaa gaactagcta
      181 caaattatgt caatttttat gaattttcaa cagataaaag aaaggctgta tcattggcac
      241 aaaatttcaa tactcaaaat tggaaaatcg atatcagtgg agaaatagaa aaacctttaa
      301 ctttaagcat ggaagatatt ttaaaatttc cactagaaga gagaatttat cgttttcgct
      361 gtgttgaaac ttggtctatg gtggtacctt gggtaggctt tgaattgcgt cgtttgattg
      421 aaatggcaaa acctacaagc gaggcaaaat ttgttaaatt caccactctt ttagataaga
      481 gtcaatttcc cgatcaagac gctttatttc caactataga ctatccttat gtagaaggac
      541 ttcgcatgga tgaagctatg catcctctta ccttgcttgc agtaggaatg tataaaaaag
      601 ccttaaagcc tcaaaatggc gctccaatac gccttgttgt tccttggaaa tatggcttta
      661 aaagtattaa atccatagtt aaaataaaat ttaccaaaga acagcctaaa tctacttggg
      721 aaagttacgc tccaagtgaa tatggttttt atgctaatgt caatcctaat gtttctcatc
      781 ctagatggtc tcaagctaac gaaagggctt taggagactt ctttaccaaa cctactttaa
      841 tgtttaatgg atatgaaaaa gaagtggcaa gtttatataa aaacatggac ttgaaagtga
      901 atttttaatg cagacaaaat actttaaatt tcttgcttat tttagcttta tcataagttt
      961 aatttatggc ttttatcata tcataaaagc ctttgatttt gtaaaagaag cctatattta
     1021 cactggaata tttgctttaa tctttttaaa tttaagtctt ttattttctt tacttaaatt
     1081 taaaaaaaca agaaattatc ctaaaatttt aggtattttt gcagcttttt gggcgatttt
     1141 gcacttttta aattatttta tttttgatag aaatgctcaa attttaaggc ttttcgatga
     1201 tatttcacat cgtttattag aagcaagtgg atttatcgca tttttaatca tatttttaat
     1261 gcttttaagt tcttttaaaa tctttaaaaa acttagtaaa atcagaaaac taggatattt
     1321 atgcttagtt ttggcaagtt atcattattt tttaacccca aaaattccta tgttttggga
     1381 atggagtgct ttaattatag ctttgtttta ttttatagtt cgctatacaa aaacattaaa
     1441 aaagttaaaa tccaacaatc ttacttttat caaaacttga atttaattct ttttgtatgc
     1501 tttctataaa atcttgcatt ttaaaaaccc catcttttga tacagctact ttcaaagctg
     1561 tattcttcac caccattaaa atttgtgctc cacttaattc ataatttgat aaaatattta
     1621 tatcaaaatc tttttcaaat aatgcttttt taggtagaaa tttttcccaa attttaagcc
     1681 tatctttaaa atcaggtttt ttaaattcta tcttataatc aaatcttctt gaaaatgcac
     1741 tatctaagct ttctaaaaaa tttgtcgtag cgataatcac accactaaaa cgctcgattt
     1801 gctctaaaaa tatattttgc atttgattat gcattttatc actaccacta cttccatcta
     1861 cacgcgtact taaaaactga tcggcttcat tgagaagtaa aataggactt tgtttgcaag
     1921 tttgcacgat atttttataa gtatcaaaaa tttttcttac attttgctca ctctctccaa
     1981 cccatttgct caaaatttta gaacagtcaa aactaagaac agattttttc attgatttag
     2041 ccatagctaa agctgacata gtttttccag taccagcagg accataaaaa ataattttag
     2101 cttctatatt tttattactc tttatacccc aagaatgaag tctttctagg acttttttat
     2161 cttgttgttt taaaatattt tctaaaagct cttttgtatt ttcaggcata ataatatcat
     2221 tgatgtcagt gcttggttct ataagctcga aaatatcttg atcttttaaa acactttcaa
     2281 ttttgatttt tttactttgt tttggttcaa aatttataat tctttgtaaa atttcatcaa
     2341 taataaaaaa acttttagaa atatctccaa aagcatttaa atattcatca cactcgatta
     2401 agtttaaaag aggagcattt tcttgtaata attttttgtt tttatgtctt tctaaatcat
     2461 tttcactgat taaagaaagt aaagaattca tttctctaga aatcgaactt tcattactta
     2521 aggcatattc ttcttttaaa agtgctagaa aaataatttg ttctttatgt tcaagattat
     2581 attctttaaa aatatcagcc aatacattat aaaatttact tttttttagt ctttctttga
     2641 tatgtctttc ataaagttta atttggtttt ttatttcact attataagca cttttttgta
     2701 taaaacttaa tctttcatat aattgaatac gcgcaaattc atcttttaaa tattctaaat
     2761 aatctgcata agcctcttgt ttctcaaagt ttaaacgagg ttttgcttct aaaaattcta
     2821 aaaaatattc acttagacta agctcacttt gcaataaggc aagagttaat gtttgagttt
     2881 tattattttc taaactttta aaaaaactcg aattttgatt tacaaaacct ctttcaataa
     2941 gtttttttaa atcctccaaa gcatcaagat aaagatactt atcatttcca aaaattgtcg
     3001 ataataaagt aaaggcattg atagaagaaa tagaaacgac ataatttcta caaagctccc
     3061 taagaatcaa agcctcattt ttagcacact taagctcttt ataaatttga gtatcttcta
     3121 tatttttcaa aattaaaaaa ttttttaatt tttccattat tttttaaatt ccttaagctc
     3181 atcttcatta aattctacgc aaatattttc atctaaaaaa tgaccttcaa aaggtagata
     3241 acaaattttt agttttccat tattaagcaa aaaattatta ttaaattgta aattttgcag
     3301 atcttcaaaa cactcatcac atgtattttt aagcttctca tgtaaaagat tttgaaattt
     3361 ttgattttca gtattatata aatcatttag ttttacaaac gcgtgagcat taatatcata
     3421 aacaaaatta ttcaactcta aaatagcacg actcatacca tcttcataaa aataatacca
     3481 ttcttcaaaa ctaatttttc catcttgtaa aaaaataggt ttttggcgaa tttgttcaaa
     3541 actaaataca cccttatgaa caggatgaaa ttctttaaaa tcatcattaa aacctataaa
     3601 atcaagacta cgctttatac gaatgccatc ttgcgtttcg acaagttcta aagtagttgt
     3661 tcctaaattt tctccttgaa aatttttatt atcatatgta agcattttag aagaattgat
     3721 tttatatttt ttacgctcat cttgccaaaa atcatttatc ttaacgagtg gaatctctaa
     3781 atttccattt atatcatcaa caattaaaaa actagaactt gtttgatttt tatccctgtc
     3841 aaaaagtgga gtcataggtg cattatcata aactatggca aaaatttctt tatcctgtaa
     3901 atgataaaaa tgcaattcac ctttataaac tttcgctaaa gctagattta caaagcaaaa
     3961 taccagtaaa aaaaatttca aactctatcc ttcaattttg aatatgcgtt aagataattt
     4021 tagtatgtga aattttatca aaaaaactta ctttattatc acaaacttga taaaaaattt
     4081 cataattttt tgcttttaaa ttttgttcaa aaccacaatc agttttttct aaatttttac
     4141 cctgccataa aggatttgcc tttaaaatat cacttaaaat atcatcataa tatacatttt
     4201 taaaaaattt ttgattaaac acttgtttat cataacacac tgcattgata caaattttat
     4261 ctttgatttt gagttcaaaa aaagcttgcc ctagtttata aacttctaaa tttaaagcat
     4321 tattttcttt ttttaaaaaa gctgtatcat tgatttttat cataggggaa gcaatcaaaa
     4381 ccatcaagct ttgacttgaa aaattttgat ttttcacact acaagcacaa agaaaaaaaa
     4441 caaaacatag agctaaacaa tgtttcaaat ttgaccttat ttgagatttt taaaactaat
     4501 atttaactct aaatcaagct cttttacaag cttcatcaca gcttgtaaat catcgatttg
     4561 ttttgctgca acacgaattt cttcaccacg aatcgaagaa ttaactttaa gcttgctatc
     4621 tttaataact ttattgattt ttttagcatt ttcactatca atagcatcgt ttgctttcaa
     4681 atttaaacga aacattgctc cactttcacg agaaagctct ttaatagctt taggattaat
     4741 tcctcttttg ataagtttag aaatcactat atcttttaaa acatcaagtt ttccttcact
     4801 agaagaactg agtttaaaaa tactctcttt ttcgcttaaa tcaatctcac acttaattcc
     4861 ttttaagtca taacgactat caagttcttt tttagcttgt tcaaaagcat tttttaactc
     4921 ttgtttatct aaagctgctg aaatatcaaa actatgttca cttgccattt tctatccatt
     4981 cttttaaatt attataaact atatccatta aagcatttaa agcctccttg ctcgcccacg
     5041 caacatgagg agtgataata agattttctt tatttttaat gcttaaaagt ggatgatttt
     5101 tcatcatagg ttcaatttct aaaacatcaa gccctacacg aatatttttt tcatctatga
     5161 ttttagctaa atcattttca ttgacaatcc cacctcttcc tacattaatc aaaatcgcat
     5221 tatcttttaa aagctttaat tcttcaaagg cgagtaaatt tttggttttt tcatttaaag
     5281 gtgcgtggat acttataata tcgcaagttt ttaataaatc ttttaattcc aaatgtacaa
     5341 aatctgcgtt tttattagct ccactcgtag aataataata aatttcggct ccaaaagcct
     5401 ttgaaatttt tgccacttct ttacctatgg ttcctaaacc tataatacca tgttttttac
     5461 cacttaaggt gtttaaaatt ctactataat ctgtaaaaat aggactttca caccatttac
     5521 cctctttgct ccatttgtca taataaagca cttgatttaa aaaagcaaac ataaatgcaa
     5581 aagtatgttg caccacactc atagtagaat acccagcagc attttttaca ataatacctt
     5641 tttctttagc atactcaata tcgatattat taacccctgt agcagtttcc aaaatgagtt
     5701 ttaaattttt acaagcatca atcacatctt tatcaattac aaccttgttt gtcatggcga
     5761 cattagcatc ttttaaacgc tctatggttt gctctttatt tgttgtggta taaatttgca
     5821 aagaaccaaa tttttcaaaa acacttaaat cataatcccc taaagttgcc gcatctaaac
     5881 aaacaatttt catttctaat cctttataat atgtcctaca aatttagaat aattatcaag
     5941 cacaagtcct ccttttctaa atcctaagcc acacccttca taagcaaaga aaacacctgc
     6001 ttgatagtat tcgttttcac atgaattaaa ctctacatat tcttgataaa tagccttatt
     6061 attcccataa ggacctacat tctcatgcaa agtttttcca tctttaatta tactgatatt
     6121 tgcaccttct ctaccaaaaa caggtttttt aacatagttt ttaccttcca aaggagtatc
     6181 ttttgtttct aaaagtaatg gatgatttgg ataaagttcc catagaattt ttaaaattcc
     6241 cttagattga aataaaagcg tataagcagg atttaaaata attgctcttt gattacgcat
     6301 gatttgagtt aaaagcatag caagttcacc ctcttctatg gctatatctt cccaaggaat
     6361 aagcttaaac caatactcat aattttcacc ctctttaaaa attccttctt cactaaattc
     6421 tacctcatct acaaaggaaa aattagtttg aaaacctgct tcattggcta tatgtgcaag
     6481 caattttgta gtgatttcct cttctttact tcctgcaaca cttgaaaaaa gaattttcca
     6541 tccttgataa tgctcttcaa acccttcaac actttcatca agggtaataa gtcttttaaa
     6601 attatccatc aaactttcat aaatgctgtt aaattgtgcg ctttcatcca ttccattttg
     6661 ttttaaaagt gcccattgta aaatcgcact ttcaaaaaga gcagtagggg tatcagcatt
     6721 aaattctata agttttatag gcttgccatc aagtccaccc gctaaatcaa aacgcccata
     6781 taaatgccaa tgaacctcat tttcccaact catcttaatc gcatcaataa gattaaaagg
     6841 aattccaagc tcatcaaaac gatcattatt aatcacttct tgcgctgcag caataaacat
     6901 atcataaagc tcatttaccg cttcataata agcattagct tcactttcct taacacaaac
     6961 taacttattg ctaatataat cacttccatc ttcatctgta tgccaagaaa aacctatatt
     7021 ttctaaataa tctttttgaa gtttgtctac ttgtaataat tgcattattt atccttaaga
     7081 gccaaaagaa gaactagaac ttgtggcttt agagcctcca ccaaaaaaac ctgatttttt
     7141 agcacttgaa gcagagcttg ttgtgcctgc tttattaaaa ctattaacac tcctttgata
     7201 agcactttga tttgaaaaag caccgcgttg ttggttggca aaattttgat tattgaaaag
     7261 ttttgaacct atccaacttc ctaaaatagc acctgcagca cttgcgagta aagtttcccc
     7321 taaactcaat cccccactac tgatttgtcc attgtcttta gttaaatttg aagttccatt
     7381 atcaatttta gctgcttctt ctttaatcaa agcatccatt tcttctttgg ataaaattct
     7441 ttctgtacca ttaagatctt ttaaaactac ccttgtttca tcacttggat attgatcttt
     7501 gattttatac tgccctggag ctgtttcttc gataattaca aaagctcctt gagcattagc
     7561 cgcttgattt aaagtatctg cattgtcatt attacttcca caacctgcta aagcacctcc
     7621 agcaacagct gctaaaccac ctatcatacc aatttgaatg atttttttga tttttttcat
     7681 aagtttatcc taaaaacaga aaatttaaat tagaaatttt aacaaaaaat aataaatact
     7741 ttttaattta ataccaaatg aagtttgtag atataaaaaa gccctttcgg gcttttgggt
     7801 tagagtcttg actcgtagcg tctaagcata taaagtcttt taagcatttt tttgcgtgct
     7861 gaaatttttt gttttttgcg aatttcagtc ataggctcaa aaaatcttct tgctcttact
     7921 tcagtcacaa ctagatttct atctacttgt tttttgaatt tacgatacgc ttcatcaaaa
     7981 gactcgttag gatgcacctt gattcctggc acagtcctca ccacctttct gtgtaaattt
     8041 ttgttgtgaa atataattat aaaacacttc ttattaattc taacttagaa agcatttaaa
     8101 aattgtttta gtttttatcg gttataatcc ttaattacaa agtgctaaaa aattataatt
     8161 aaggtctaaa aatgcaagga cacattacaa actatacaaa aaaacgatat tttgtatatt
     8221 taattgcaag tattatcata ttttccctac ctttcataag aattaatgag aatcattttt
     8281 ttcttttaag ttttgatcat tctaaattaa acctattttt tatttctttt tcaacacaag
     8341 aattttatct catgcctttt gttcttatat ttcttttttt atttattttt tttattacaa
     8401 ctttaggtgg aagaatttgg tgtgcttgga gttgtccaca aacgattttt agagttatat
     8461 atagagatat catacaaact aaatttctta aaattcgcaa aaatatcaat aacaaacaaa
     8521 aagaatatga gaggcaatat tttaaaaaat ttcttggagt gataattttt tattttatat
     8581 ctttagttgc tgttagtaat ttactttggt actttattcc tcctgaagat tttttcaatt
     8641 atattcaaaa tcctggcgag catctacttt tacttggaat tttattttgt gctagcttac
     8701 tttttacttt ggatattacc tatttacaag aaaaattttg tgtttatgtc tgtccttatg
     8761 caagaataca atctgtaatg ttcgatcatg atacaatgca agtgatctac gatgaaaaac
     8821 gcgggggctt gatctatgat ggacacacca aacttcataa aaaaccgcct gagggagaat
     8881 gcataggttg cgaagcctgt gttagtatct gtccaactca tattgacata cgcaaaggaa
     8941 tgcaacttga atgtattaat tgtcttgaat gtgccgatgc ttgctctaag gttcaaagca
     9001 aatttaatcg tccaagtttg atcaattgga caagtgcaaa agctattgaa acgcgttcta
     9061 aggttcatta tttaagattt agaacgatag catattttat agttctttta attgctttac
     9121 tggctttaat catcatggga agcaaaaaag aaagcatgct tttaaatatc aatcgtagta
     9181 gtgaattata taatatttca aatgttaaag gtgaattagt catttcaaat gcttatacct
     9241 ttttgtttca aaatacagat tctaaacctc atgaatatta ttttacagca aatttagaag
     9301 gaataaatga tggaattgaa atcataagac caaacaaacc ttttaaatta aaagcaggag
     9361 aacaagtcaa aaaaatagtt gttatcaggg ctacaaaaaa tttagcaaat aatgataaaa
     9421 aagacgtaat ctttccttta catataaaag cttacgcaaa ggataatgaa aaaatttcgg
     9481 tttttagaaa aagtatattt gtatacccta aaagcactct tataaaggat aaaaatgaac
     9541 tcaaatagaa caccatcaca aaaagtttta gccagacaag aaaaaatcaa agcagtggcc
     9601 ttagagcttt ttttaacaaa aggataccaa gaaacaagtt tgagtgatat tattaaatta
     9661 tctggaggat cttattctaa tatttatgat ggttttaaaa gtaaagaagg gctattcttt
     9721 gaaattttag atgacatatg taaaaaacac tttcatctta tttattccaa aacacaagaa
     9781 attgaaaatg gcactttaaa agaaatttta acttcttttg gtttagcttt tatagaaatt
     9841 ttcaatcaac cagaagctgt agcttttggt aaaattatct attctcaagt ttatgacaaa
     9901 gatagacatc ttgccaattg gatagaaaat aatcaacaaa atttttccta taacatactt
     9961 atgggttttt tcaagcaaca aaataattct tatatgaaaa aaaatgcaga aaaacttgct
    10021 gttctttttt gcactatgtt aaaagaacct tatcatcatc ttaatgtttt aattaacgct
    10081 cctttgaaaa ataaaaaaga acaaaaagaa catgttgaat ttgttgtaaa tgtttttcta
    10141 aatggaatca atagctccaa agcttaaaaa ataattttat taaccaaaat taagatataa
    10201 ttagccaaaa atttttgtaa taaaaattac aatttttaat ttaatttttc aaggcaaaac
    10261 catgaaatta tttcaaaaaa atactatttt agctttaggt gttgtgcttt tactcactgc
    10321 ttgcagcaaa gaagaagcac caaaaataca aatgccgcct caacctgtaa caaccatgag
    10381 tgctaaatct gaagatttac cacttagttt tacttaccct gctaaacttg tcagtgatta
    10441 tgatgtcatt ataaagcctc aagttagtgg cgtaatagaa aataaacttt ttaaagctgg
    10501 agataaagta aaaaaaggac aaacattatt tattatagaa caagacaaat ttaaagctag
    10561 tgttgattcg gcttacggac aagctttgat ggctaaggca actttcgaaa atgcaagcaa
    10621 ggattttaat cgttctaaag ctctttttag taaaagtgca atctctcaaa aggaatacga
    10681 ctcttctctt gctacattta acaattcaaa agctagtcta gcaagtgcta gagcacagct
    10741 tgcaaatgca agaattgatc tagatcatac cgaaataaaa gctccttttg atggtactat
    10801 aggagatgct ttagttaata taggagatta tgtaagtgct tcaacaactg aactagttag
    10861 agttacaaat ttaaatccta tttacgcaga tttctttatt tcagatacag ataaactaaa
    10921 tttagtccgc aatactcaaa atggaaaatg ggatttagac agcattcatg caaatttaaa
    10981 tcttaatgga gaaaccgttc aaggcaaact ttattttatt gattctgtta tagatgctaa
    11041 tagtggaaca gtaaaagcca aagctatatt tgacaacaac aactcaacac ttttaccagg
    11101 tgcttttgca acaattactt cagaaggttt tatacaaaaa aatggcttta aagtgcctca
    11161 aatagctgtt aaacaaaatc aaaatgatgt ttatgttctt cttgttaaaa atggaaaagt
    11221 agaaaaatct tctgtacata taagctacca aaacaatgaa tatgccatta ttgacaaagg
    11281 attacaaaat ggcgataaaa tcattttaga taactttaaa aaaattcaag ttggtagcga
    11341 agttaaagaa attggagcac aataatgttt tctaaatttt ttatcgaaag acctgttttt
    11401 gcttcagttg ttgcaattat catttcttta gctggagcta taggtcttac aaatttacct
    11461 atagaacaat atccttcttt aacccctcct acagttaaag taagtgcaac ttacacagga
    11521 gctgatgcac aaaccattgc ttcaacagtt gcaagtccta tcgaagatgc aatcaatggc
    11581 gcagataata tgatttacat ggattcaact tcaagttctt caggaactat gagtttgact
    11641 gtttattttg atatcggtac agatcctgat caagccacca tagatgttaa taatagaatt
    11701 tcagccgcaa ctgcaaaaat gccagatgca gttaaaaaac ttggagtaac agttagaaaa
    11761 acttcctcaa caacacttgc tgcaatttct atgtattcaa gtgatggctc aatgagtgca
    11821 gtagatgtat ataactatat cactttaaat gttttagatg agttaaaaag ggttccagga
    11881 gttggagatg caaacgctat aggaaatcgt aattattctt taagaatttg gctcaagcct
    11941 gatttattaa ataaatttgg aatcacagct actgatgtaa tttctgcggt taatgaccaa
    12001 aatgcccaat acgcaactgg taaaattggc gaagaacctg taacccaaaa atccccttat
    12061 gtttattcaa tcactatgca aggaagacta caaaatccta gtgaatttga aaacattatt
    12121 ttaagaacaa ataatgatgg atcattttta agacttaaag atgtagctga tgtggaaata
    12181 ggatcacaac aatacagctc acaaggacga ttaaatggca atgatgcagt tccaattatg
    12241 atcaatcttc aatcaggggc aaacgcattg catacagcag aacttgttca agctaaaatg
    12301 caagaacttt caaaaaattt tccaaaaggt ttaacatata aaattcctta cgatacaaca
    12361 aaatttgtaa tagaatcaat caaagaagtt gttaaaactt ttgttgaagc tctaatttta
    12421 gttatcattg ttatgtatat gttcttaaag aatttccgtg caacacttat tcctatgata
    12481 gctgtacctg tttcattgtt aggaactttt gctggacttt atgttttagg ttttagtatt
    12541 aacttgctta cgctttttgc tttaatttta gccataggga tcgttgtaga tgatgcgatt
    12601 atagttgtag aaaatattga taggatttta catgaaaatg agcaaataag cgtaaaagat
    12661 gctgctatcc aagcgatgca agaagttagc tctccggtta tttcaattgt tcttgtgctt
    12721 tgtgctgttt ttgtaccagt ttcttttata tcaggttttg ttggagaaat tcaaagacaa
    12781 tttgctctta ccttagctat atctgtaacc atatcaggtt ttgttgctct taccttaaca
    12841 ccttctttat gtgcactctt tttgcgacgt aatgaaggag agccatttaa atttgtaaag
    12901 aaatttaatg atttttttga ttggagtacc tctgtattta gcgcaggagt agcatatatt
    12961 ctaaaaagaa ccattcgttt tgttttaatt ttttgtatta tgcttggggc aattttttat
    13021 ctctataaag ctgtaccaag ctctttagtt cctgaagaag atcaaggttt gatgattggc
    13081 attatcaacc ttccttcggc ttcagcactc catagaacaa tctcagaagt tgatcacata
    13141 agccaagaag ttttaaaaac taatggagtt aaagatgcaa tggctatgat aggatttgat
    13201 ctttttacaa gttcactcaa agaaaatgcc gctgcaatgt ttataggctt gaaagattgg
    13261 aaagatagaa atgtgagtgc tgatgaaatc gccatggagc ttaataaaaa atttgctttt
    13321 gatcgcaatg cttcaagtat atttataggc ctacctccta tacctggatt aagtatcaca
    13381 ggcggttttg aaatgtatgt tcaaaacaaa agcggaaaaa gctatgatga aatacaaaaa
    13441 gatgtaaata aacttgttgc tgtggccaac caaagaaaag agctatcaag agtaagaaca
    13501 acccttgata caactttccc tcaatacaag cttataattg atagagataa attaaaacac
    13561 tacaatctta acatgcaaga tgtttttaac acgatgaatg caactatagg cacttattat
    13621 gttaatgatt tttctatgct aggtaaaaac ttccaagtaa atatccgcgc aaaaggtgat
    13681 tttagaaata cacaagatgc attaaaaaat atttttgtaa gatcaaatga tggaaaaatg
    13741 ataccacttg attctttctt aactttacaa agaagttcag ggcctgatga tgtaaaacga
    13801 ttcaaccttt tcccagcggc acaagttcaa ggtcaacccg caccaggtta tacttcaggt
    13861 caagctatag aagcgattgc tcaagtagca aaagaaactt taggggatga ttattccata
    13921 gcttggagtg gatcagctta tcaagaagtt tctagtaaag gaacagcaag ttatgctttt
    13981 gctttaggta tgatatttgt ctttttaatt ctagctgccc aatatgaaag atggcttata
    14041 cctttagcag ttgtaacagc tgtacctttt gcggtatttg gatcattttt attggtatat
    14101 ttaaggggat ttagcaatga catatatttt caaacaggac ttttgctctt gattggactt
    14161 tcagctaaaa atgctatctt aatcgtagaa tttgcaatgg aagagcgctt taaaaaaggc
    14221 aaaggagttt ttgaagcagc tgttgcagca gcaaaacttc gttttcgtcc tatcataatg
    14281 acttctttgg catttacttt tggggtcttg ccaatgattt tcgcaacagg agcaggaagt
    14341 gcttcaagac actctttagg aacagggctt attggtggaa tgatcgcagc atcaacttta
    14401 gcgatattct ttgtgccttt atttttctat cttttagaaa attttaatga atggctagat
    14461 aaaaaaaaga ggtaaggttc atgaataaaa taatttcaat tagtgctata gcaagtttta
    14521 ctcttttgat ttcagcttgc tctttaagtc caaatttaaa tattcccgaa gcaaactata
    14581 gcattgataa taagcttgga gccttatctt gggaaaaaga aaacaatagc tctatcacaa
    14641 aaaattggtg gaaagacttt gatgatgaaa atttaaataa agtggttgat ttagcactta
    14701 aaaataataa tgatttaaaa cttgctttca tacacatgga acaagctgct gctcaattag
    14761 gtatagattt tagcagtttg ttgccaaaat ttgatggtag cgcaagcgga agtcgtgcaa
    14821 aaacagctat aaatgctcca agcaatcgaa ctggggaagt aagttacggt aatgatttta
    14881 aaatgggact taatttaagc tatgaaatcg atctttgggg aaaatatcgc gatacatatc
    14941 gcgcctcaaa atcaggcttt aaagcaagtg agtatgatta tgaagctgca agactttctg
    15001 ttatttcaaa tacagttcaa acttatttta atcttgtaaa tgcttatgaa aatgaaaatg
    15061 ctcttaaaga agcctataaa tctgcaaaag aaatttatag gattaatgat gaaaaatttc
    15121 aagttggtgc tgtaggtgaa tatgaacttg ctcaagcaag agccaactta gaaagtatgg
    15181 ctttgcaata taatgaagca aagttaaata aagaaaatta ccttaaagct ttaaaaattt
    15241 taacttcaaa tgatttaaat gacatacttt acaaaaatca aagctatcaa gtttttaatc
    15301 ttaaagaatt tgacattcca actggaattt caagtaccat cttgcttcaa cgtccagata
    15361 ttggctcttc tttagaaaaa ttaactcagc aaaattatct tgttggagta gctcgcacgg
    15421 ctttcttacc tagcctttct ttaacaggat tattgggatt tgaaagcggg gatttagata
    15481 ccttggttaa aggaggttct aagacttgga atataggtgg aaactttact ctgcctattt
    15541 ttcattgggg tgaaatttac caaaatgtaa atttagccaa gcttaataaa gatgaagctt
    15601 ttgtaaatta tcaaaatact ttgattactg cttttggaga aattcgctat gctttagtag
    15661 ctagaaaaac tatacgctta caatacgata atgcacaagc aagcgaacaa tcttacaaaa
    15721 gaatctatga aattgctaaa gaacgctatg atataggaga aatgtctttg caagattatt
    15781 tagaggcacg tcaaaattgg cttaatgctg cggttgcttt taataatatt aaatattctt
    15841 atgccaattc catagtagat gtaatcaaag catttggtgg aggatttgag caaagtgaag
    15901 atacgagtaa aaatataaaa gaagaatcaa aaaatttaga tatgtctttt agagaatagt
    15961 ttgttctatt ctctaaataa attaaaaatc tttgtctaaa tctgcatctg taatttcata
    16021 agccttgtaa atagcaggca ataattttct tatagcataa tcaaaatgat aaaattgctt
    16081 atatacctct tctggattta aatttttagc attcttaaaa tcaaatactt cagtattatt
    16141 gattttggca atattttcat caaaataaga gtaaaactct gctctttgtt taaacaaagc
    16201 atttaaattt tgaacaattt tggctttatc catttttata tcctttttaa ataatttaaa
    16261 aacttaatcc cattttttat ttaagaaata aaaaatttac tcctatttta gctaaaaatt
    16321 gataaagtta tgtcttaaat attttaatat ataggccact tatgaattta tttcaaaatt
    16381 tagctttaaa atactctcat actatgatgg aaaaatccct ccaaaaaggt ttcaatgtcg
    16441 aacttttaaa acaacccgaa gaaaaaattc caaaacaaga caaaagctat atgctttatg
    16501 cccatgtacc tttttgccat actttttgtc cttattgtag ctttcataaa tattattatg
    16561 atgaaaattt agccaaagta tattttcaaa atcttagaga agaaattaaa atcatgaaaa
    16621 ataaaggttt tgattttacc tccatgtatg tgggtggtgg tacaacactg attgatgaag
    16681 aggaattatt aaaaacctta gaactttgta aaaagttatt taatataaaa gaaatttcat
    16741 gcgaaagcga tccaaatcat attgatccaa ataagctttc tatgtttaaa ggtataattg
    16801 atcgtttaag ttgcgggatt caaagttttg atgatgaaac tttgaaaaaa gtggcaagat
    16861 ataataaatt tggttcatct aaagaacttc aagaaaaaat ttcaaaagct ttaggaattt
    16921 tacctatttt tagtatagat cttattttca atcttccagg acaaaacgaa aaacaacttt
    16981 taaatgactt agaaattgct aaaaatttag ccccgcaaca aatcacaacc tatcctttaa
    17041 tgaaatcaaa tcttaccaaa gataatatcg ctaaaagtct aggagtgagc attaaagata
    17101 atgaatttac ttattatcaa atcatacgag aattttttaa agactatacc caaaacaatg
    17161 gttggagttt ttctttagaa aaaaacaagc ttaatgacga atatgtcagt tctcatcatg
    17221 aatacctagg agtaggcagc ggggctttta gctttttaga tggggagctt ttaatcaatg
    17281 catttaatct aaatgattat gctaaattta tacaagaaaa acaaaatgct aatatagcca
    17341 aagcttgttt tgataaaaaa gaaattatca aatatgtctt tttaactgaa attttttcag
    17401 ggaaaataga aattgataaa tttaataaaa ctctaaattg caatctcgaa aaagaacttt
    17461 tcatagaact tttaggactt aaaacaagtg gtgccatcat aaaagatcaa aatgctttaa
    17521 tcgcaactga atttggtcaa tatctttttg tggttttaat gaaagatttt tacacaggaa
    17581 tggatcttgt gcgcgcagta tttagagatg ataagcgtct taaaaataaa gattatatcg
    17641 atatcatgaa agaaaatatt gatccgctta actccgctag tatggaattt aaagcggaga
    17701 caaactaaaa gggacgaaca accatcatta aagcgatgat aataaacatt atagttggaa
    17761 attcattata aattctaaaa tattttccac ttttagtaga agtatcattt gctaaagctt
    17821 ttaaacaata ataattatgt atatgaaaaa taatcaaaag tgtaacacag gtaagtttaa
    17881 catgcataaa acccgcacct accattaaaa cttccttatg agcatgcaac attaaacttc
    17941 ctgtgattaa agtcacaatc attgcaggag tttgtatata ataataaagc tttctttctt
    18001 gaatttttac aacctcgaca aaacctttat tgtctttatg ttcagcatga tacacaaaaa
    18061 gacgaggtaa ataaaaaaga cccgccatcc aagaaacaaa tgccaaataa tgcacccatt
    18121 taatccaaaa ataataatca ttaatccatt ctgtcatctt ttttcctttt tttaaatatt
    18181 tcttgtatta aaatcaaagc cacacttata tttatcatga catctgcaac attaaaaata
    18241 gcaaaattaa accatttatg ccaaaaaaac atatccacta cacctccatg tataaaacga
    18301 tccaataaat ttgaaacgcc ggcaccaagc atcattccaa aagctatgct atgagttttt
    18361 aaaagtgttc tttgccaaaa aagataaata aaaagcacgc caattaaagc aagatgtaaa
    18421 tattttaaat tatgttctaa aaaactcaac attgaaaaag ctacgcctgt atttagagca
    18481 taagttaaat ctaggtattc actctgccat ctaaatcctg ctaaagttaa ggattttacc
    18541 cattgatcaa gggcaaaaac caaaacaaag gcaccccaaa aataaaaaat aaatttaaaa
    18601 gttttagcca tttaaagctt tcttaaaaaa ctccacaaca tttttcattt ctttttctaa
    18661 gagcttaata tctctggctt ctagtaaaag tcttatcaaa ttttctgttc cagaatagcg
    18721 aaataaggta ttaatatttt tattttctaa atcttttttt aattctttta aacctttaat
    18781 tttatctaaa tctttttttt ctgcaatttt aagattgatt aaaagctgag gataaggttt
    18841 aacttgaccc aaaatagaac ttgcagattt tttcttagaa agcattaaag cactaaattg
    18901 caaggcagct atcaaaccat ctccagtttt tgcataatcg ctaaaaataa tatgcccact
    18961 ttgttctcca ccaaaatttc caccattggc ttttagtttt tcaagcacat atttatcgcc
    19021 aacattacaa gtatcaagtt ctataccatg tttatttaaa aactctttta aagcaccatt
    19081 actcattata gtagccacaa cacttgattg taatttacct tgttctttaa gataaagtgc
    19141 caatacaccc aataaactat ccccattagc cacttcgcct ttttcatcta caaccaccaa
    19201 acgatctgca tcaccatcaa aagcaaagcc cacatctgca cgcaaacgct ttacctcagc
    19261 agctaagttt acaggatgca aagctccaca attttcattg atattaagtc cattaggttt
    19321 atcactcatt actataactt cagcgcctaa ttccttaaaa acagtaggtg ctaccttata
    19381 agctgcccca tgagccacat ctaaaacaac acgcaaagac tttaaagtaa gatcttttgg
    19441 aaaagaattt ttaatagaaa caatatatct tcctataaca tcatcaattc tttttgcttg
    19501 accaattttt tccatatcta ccttagaggc ttgtataagc ttatcatcaa aataaatttc
    19561 ttctattttt ttctctatat cttcactgag tttatttcca tgagcatcaa aaaatttaat
    19621 accgttatca taataaggat tgtgagaagc tgaaatcata atccctgcgt cacaacgcat
    19681 atcttcagtt aagaatgcaa tcgcaggagt tggcatagga ccaatttgta taacattata
    19741 tcctatagaa gtaagccctg aaacaatagc attttctatc atatagccac ttcttcttgt
    19801 atcttttcct actaagatat tattagtaat acttttatct ttaaaataaa tacccgcagc
    19861 cattgctaaa cgcatagcca aaaaactatc taaaaattca cccgcttttc cacgaactcc
    19921 atcagttcca aaaagtctca ttgcaaacct ttctagcaaa atttaaagac aattataaca
    19981 aagctaagat aaagaaattt aaacaagctc taaaaataga gcttgtttgg aaccttatag
    20041 ttcaggttta ggagtttttt cagtagaaat aggaagttgt ggataaacaa ttgctggttt
    20101 tgttcctgtt aaggatttta agaaagtttc aatacttttt gcttctttat cagaaatttt
    20161 aatgccaagt tgcacactac ccatttcctt aatagcatct tttagattcc aaatagcgcc
    20221 attatgaaaa tatggagcag tttcagcaac atttcttaaa gttggagttt ttaccatgcc
    20281 atttgcatca cctttaaaat cacctaaatt tgcaaattta tatttaccag caacttcaaa
    20341 cgcttgcata ttgccaccta aattcacacc attatgacaa gctacacaac ccttgtctat
    20401 aaaaagcttt aagccttttt gctcttcttt tgttaaagct ttttcatcgc cttctaaaaa
    20461 tttatcaaaa cgagatggag tgatcaaggt tctttcaaaa tttgcaattg catcagcaat
    20521 attgtcaaaa tttacaccac ttttaccata gattttttta aactcactca catattcagg
    20581 caatgatgaa attttttcta ctgcgagttt agcaggagtt gccatttcag gatcagcttg
    20641 gattggacct ttagcttgat cggctaatgt tcctgcacga ccatcccaaa attgagtatt
    20701 atttaaaacc gcattataaa ctgttggtga atttaaatga tggggatttg ctgtccattt
    20761 atgacctatt gcagtactaa ccccatctgt tccaccaagt cctacattgt gacaggtatt
    20821 acaagaaatg ataccacttt ttgaaaggcg tggttcaaaa taaagctttt tgccaagctc
    20881 tgctttttca agagtaaatt cactagcctt tactccattt tgttttaaaa tttcatcaac
    20941 acctttttga tcttttggca aggcaacaag acctgaattt ttagcttcat ctataagact
    21001 tgcagcattt aagcttgaaa aagcaactaa ggatgcgatt agcaatgctt ttactttcat
    21061 ttat
//
LOCUS       DAPIVO010000029        20784 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.029, whole genome shotgun sequence.
ACCESSION   DAPIVO010000029 DAPIVO010000000
VERSION     DAPIVO010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20784)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20784)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20784
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.029"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..586)
                     /locus_tag="RJ239_000943"
     CDS             complement(<1..586)
                     /locus_tag="RJ239_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlgG"
                     /protein_id="HDV7331071.1"
                     /translation="MITQTMQSKESKESKENSKISFANAFLKQNASKLNEIQNANSQT
                     LARSEALNSTNTTNTSNNTNFSISSKTSSPNYDISSEFKNSIYTLKYKQVDISNTSTN
                     TAYGYSVDKDGYMGSDFNKAAGLPEDFKIHKSTLDEIKKAAENDPVVSSTKEYLGVSS
                     YYSNIDIANTIKQYYNLFSNALGQSFSNDKTSFSE"
     gene            complement(691..1410)
                     /gene="kdsB"
                     /locus_tag="RJ239_000944"
     CDS             complement(691..1410)
                     /gene="kdsB"
                     /locus_tag="RJ239_000944"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HDV7331072.1"
                     /translation="MIIIPARLKSSRFHEKILCDIGGVPMFVATARRVSSVDEVCIAL
                     DDEKVLSIAKEYGLNAVLTSKDHESGTDRINEACKKLALKDDEIIINVQADEPFIECE
                     NLLKFKEFASFCLDKKAFMASCYKKITQEEAMDPNLVKVLCDKEGYALYFSRAKIPYE
                     RENYEESFKGHLGIYAYSVKALREFCSLSSSALERAEKLEQLRAIENGKKIKMLEIST
                     TSMGIDTKEDYERALKIYLEK"
     gene            complement(1407..2819)
                     /locus_tag="RJ239_000945"
     CDS             complement(1407..2819)
                     /locus_tag="RJ239_000945"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HDV7331073.1"
                     /translation="MKLVESRNVNNVSSFKEALINPNAPEGGLYSPLNLPIFEGEKYA
                     NLSYKDFALKLIESFGFGEEELFKKALKSYESFDDKNTPISLQKISEKTYINELWHGP
                     TRAFKDMALQPFGVLLSEFSKDKNILIICATSGDTGPATLKSFENAKNVKVACMYPKG
                     GTSGVQELQMRALDKDNLKVFAIDEDFDAAQRTLKELLFSKDFQNEIKALNYELCAAN
                     SVNFGRILFQIIYHYYASLKLFNEFLEEVQIIVPSGNFGNALGAFYAKKMGAKISKIK
                     IASNANNILSEFFNQGVYDLREKSLKKTISPAMDILISSNIERLLFAKFKDKRTKELM
                     NLLKNERYFKLEKEELQSLQEDFEADFCTDEECMQFIKQSKILIDPHTATCFKMLDPL
                     KPSIITSTAEWTKFTPSMIKALYDRDSKNEKEDLKFIAKEFNVQVKDEILALFDLKNS
                     DEKVFEARNIKKEILDWMQK"
     gene            complement(2816..3742)
                     /locus_tag="RJ239_000946"
     CDS             complement(2816..3742)
                     /locus_tag="RJ239_000946"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HDV7331074.1"
                     /translation="MNEEKNYELWLDNYFFKPNFWQKCLAFILLPLSVLYAFFAILNT
                     FFRKKIVFKKPVISVGNLSFGGNGKTPLCKAIAREFDGVFIVLRGYKRKSKGLFVVKN
                     QNEILCTLTQSGDEAMEYAFEENIKGVIVSEDRVKGIEKAFELGAKIVVLDDAFSKFH
                     IKKFDILLESKIKPYFNFTLPSGAYRLPKFYEKRADFIALEGRDFVRYSFVKENPKAV
                     LVTAIAKPFRLYEHFIKARACYFFKDHYEFKKEELENLLKKHNCDTLMLTFKDFVKVK
                     DFGFKCQIIELNIELKDSLREKIKTYIKEFEQ"
     gene            complement(3746..4486)
                     /locus_tag="RJ239_000947"
     CDS             complement(3746..4486)
                     /locus_tag="RJ239_000947"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HDV7331075.1"
                     /translation="MDWQKITEKMCDFIQEKVKNSQSQGVVLGLSGGIDSALVATLCK
                     RALKENVFALLMPTQISNKANLEDALRLCADLNLEYKIIEIQSILDAFIKQSENTTLV
                     SLGNFAARIRMSLLYDYSALKNSLVIGTSNKSELLLGYGTIYGDLACAFNPIGSLYKS
                     EIYALAKYLNLHENFIKKAPSADLWENQSDEADLGFSYTKIDEGLKALETNDEKLLRT
                     LDPSLIAMLKNRMQKNAFKGKMPEILEI"
     gene            4560..5156
                     /locus_tag="RJ239_000948"
     CDS             4560..5156
                     /locus_tag="RJ239_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDV7331076.1"
                     /translation="MQIIKQACGVYETNCYILFTPKGEFIIDPGTDALLFIKKHVKKP
                     LAILNTHGHYDHIWDNAKVKKEYNIPIYIHKNDAFMLHDDFNQGYDSSDADFLVDNED
                     ILNICGVDFKFHFLPGHTPGCTMIEIVGKNIMFSGDFLFYRSIGRWDFPYSDANLMKQ
                     SLEKVMTYKEDFKLLPGHGQETTLKEEQVHLPSWLRYF"
     gene            5168..5473
                     /locus_tag="RJ239_000949"
     CDS             5168..5473
                     /locus_tag="RJ239_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331077.1"
                     /translation="MELDQILLYAFIFLNLFALFGLFLGNKKKNQFNDKKFYKICPCK
                     KMAENGSLSTICIYSAVGGFFYSVLSIGFIGFGNWTLNFIFLLALLSVFLGWKLKLD"
     gene            complement(5514..6293)
                     /locus_tag="RJ239_000950"
     CDS             complement(5514..6293)
                     /locus_tag="RJ239_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase"
                     /protein_id="HDV7331078.1"
                     /translation="MNTEFQGKTLVISGGTRGIGKAIVYEFAKVGANIAFTYNSNAQI
                     ADEMVQDLEKNYKIKARAYEFNILEPETYKELFEKIDVDFDRVDYFISNAIISGRAVV
                     GGYTKFMKLKPKGINNIFTATVNAFVVGAQEAAKRMEKVGGGSIISISSTGNLVYIEN
                     YSGHGTAKAAVEAMARYAATELGEKNIRVNVVSGGPIETDALRAFTNYEEVKQATINL
                     SPLNRMGQPEDLAGACLFLCSSKASWVTGHTFIVDGGTTFK"
     gene            complement(6293..7189)
                     /locus_tag="RJ239_000951"
     CDS             complement(6293..7189)
                     /locus_tag="RJ239_000951"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HDV7331079.1"
                     /translation="MDKNIIIGAMTALITPFKNGKVDEQSYARLIKRQIENGIDAVVP
                     VGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGAD
                     GILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCE
                     NIYGVKEASGNIDKCVDLLAHEPRMMLISGEDAINYPILSNGGKGVISVTSNLLPDMI
                     SALTHFALDENYKEAKKINDELYNINKILFCESNPIPIKTAMYLAGLIESLEFRLPLC
                     SPSKENFAKIEEVMKKYKIKGF"
     gene            complement(7182..8432)
                     /locus_tag="RJ239_000952"
     CDS             complement(7182..8432)
                     /locus_tag="RJ239_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDV7331080.1"
                     /translation="MIAYEKIQLKNKLEVYALPVNKNSDVISVDIFYKVGSRNEIMGK
                     SGIAHMLEHLNFKSTKNLKAGEFDEIVKGFGGVDNASTGFDYTHYYIKCAKKNLDKAL
                     ELFAELMANLNLKDEEFQPERAVVLEERRWRTDNNPLGYLYFRLFNHAFMYHPYHWTP
                     IGFFKDIENWSIEDIKEFHSIYYQPKNAILLVSGDIESKEVFELSKKHFEKIKNTKTI
                     PKIHTKEPKQDGVKRIYLHKNSDTELLALAYKIPNFKHKDIPALNALSELLGSGKSSL
                     MSEILIDKLNLINDYYAYVNDCIDENLFIFICNCNPNVNAEKVEKELLKIIDKLKMGK
                     ISQKDLQRVKNNVKSDFIFSLNNASAVANIYGSYLARGDINPLLNYEKDIQNLELKDL
                     ISCAKKYFIQENSTTVILRKDSNG"
     gene            complement(8429..9487)
                     /locus_tag="RJ239_000953"
     CDS             complement(8429..9487)
                     /locus_tag="RJ239_000953"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HDV7331081.1"
                     /translation="MAYEMIKLLLFKLNPEHAHALVEYSLRALSASFPGALSFLAHKY
                     IVDDESLRQNLLGLDFNNPVGLAGGFDKNATMIRPLSALGFGFLEVGTFTPKPQEGNE
                     KPRLFRLVKQESIQNAMGFNNEGAEKIALRLAKTYPFVLPLGVNIGKNKITPNDKALE
                     DYFTLFRDFKDLCDYFIVNISSPNTKNLRELQNDDFLNTLLEEAKKITSKPILIKIAP
                     DMKIDDALNLCENAIKKGADGFILANTSVDYSLLDNNRTFGGISGRLITEKSGIFFKE
                     VTKILFGKTLLIASGGIDSADIAYERIKNGANLVQVYTALIFKGPSLVKNINQNLIEL
                     LRKDGFLHISEAVGVNLK"
     gene            complement(9519..11261)
                     /locus_tag="RJ239_000954"
     CDS             complement(9519..11261)
                     /locus_tag="RJ239_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7331082.1"
                     /translation="MHNEMNLKEVLIRFKPFYKRYWKQFAIAIFGMILASGGTAGSFY
                     ALEPILNYIFVEKNEALLYTVPFLLVLMYFFKNLGTYLQSFYVSFIGTDMLRVLRARV
                     LKNVLRLDMDFFKRYRSGELVSRCTNDINALQSIVSNIIPDFFRELLTAIGLLAVVLY
                     QSPTLAFFALVILPLAIFPLVWFAKKLKKYARNIQETNSDLLSYLGEIFSNIELIKAN
                     DNEKKESDKFAKHNDTLCKLNLKSARIDALTSPLMDMMGSVGVAVVIIVGGREVINGS
                     MSVGSFISFVSALFAIYTPLKRLSSLYGKLQGAVAASERTFYLLDLEPQIKGGSKELK
                     NIEKISFENVEFAYENPHKSVLKGVNFDFVKGQMLALVGTSGGGKSSIINLLMYFYEK
                     QKGKILLNQEDISTFTIESLHAKIGLVTQNIYLFNDSFAANIAYSEELEEEKVIQALK
                     LANAYEFVKEMGGIWAEVKEHGKNLSGGQKQRIAIARALYKNPDVLIFDEATSALDNE
                     SEKAIVKTIENLKQDRLILVVAHRLSTIENADKIVVLDKGKVLAIGKDEELLQTCSLY
                     QKFKSKEKTKPSFS"
     gene            complement(11254..12642)
                     /locus_tag="RJ239_000955"
     CDS             complement(11254..12642)
                     /locus_tag="RJ239_000955"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HDV7331083.1"
                     /translation="MRLLDSVTKEKIKLDKKDISIYLCGPTVYDDAHLGHARSSVCFD
                     LLRRVLLAQGNRVKFARNYTDIDDKILKKMAQSGQTLEEITEFYIKSYEEDMRVLNVL
                     DPDFKPRATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENIS
                     RLSNEVQKRNESDFVLWKFDENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGI
                     DLLFPHHENEAAQCRCGCKRKLANIWLHNGFVKIDGEKMSKSLNNSFFIKDALKEFMG
                     EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIGIKS
                     EIAKQILEILNDDLNVSKALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIF
                     GFGFMDATLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLD
                     TPNGTIWEKINA"
     gene            complement(12642..14093)
                     /gene="murJ"
                     /locus_tag="RJ239_000956"
     CDS             complement(12642..14093)
                     /gene="murJ"
                     /locus_tag="RJ239_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HDV7331084.1"
                     /translation="MKSLVFKNFIINALGILFSRILGLARDVLIALFLGAGLYSDIFF
                     VALKMPAFFRRIFAEGAFGQSFLPNFVKAKKKGAFCVSVMMQFSLIVFLFCLLVSFFS
                     SFFTKLFAFGFNADTIALAAPLVAINFWYLFFIFLVTFLGAILNYRQKFFITSFSAAL
                     FNLSIVIAAFFVDKNAPQNTLYYFSYATVLSGVAQLILHLLVLKNNPVIRAMTLSIKF
                     KKTKAKLQGFYGNFFHGVLGSSATQFSSLLDTTIASFLMSGSISYLYYANRVFQLPLA
                     LFAIALTQVSFPKILKHLKSDQENLALKFMQRALALLSILLIASSIVGSVFALEISKL
                     LFERGNFTHEDSVITAYVLIAYLIGLLPFGLQKLFSLWLYAKFKQKTAAWIAVKSLII
                     SALCSMAFIFLIKDESLKVIAVALSSSISAFYLLGANIKEFGFKKFFALISIKICLLV
                     IVALIVFTILLILIKPYILSFFIGIFTSFKGVF"
     gene            14197..16056
                     /locus_tag="RJ239_000957"
     CDS             14197..16056
                     /locus_tag="RJ239_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF342 domain-containing protein"
                     /protein_id="HDV7331085.1"
                     /translation="MALDEKIIAYTENPARELLSVASRTNLSLNELDFSLLAFSTQYR
                     FGDLEWEKISEKELTLFDKDEIFLKNDLQIKQEYKIEIFHGINQSKASQAVKLVANKN
                     LTKIVAQIDFTNLDFHEKLALELLQNIYKKMLKLKFLIGIRIFDFKKKLMSFCNQYKN
                     TPLNKTIQITVAQGIDPIESQDESLILTYKEKTKNYTIDEKRSGIIVVDENEVVLKHV
                     KFKQGKEGKDLNLHTLKVLAANENKVKFSCSSAFKQVEQDGYTEYIALKKGYVVQDGE
                     KFDIANELDFNGVDFKNIGIIRAGLDKNVKINIKFLSEVKDAVNSGVGIECEELNVVG
                     SVGSNTQLNATKMKIEGTTHSKAKIQAKQAYIKTHRGFAEAEILNIDLLEGGTIKAKE
                     VRIKKSLGGNIQADKIYIENLESNNSCVFFENTTIERINGDNNKFHAKIKTLDKNYDE
                     EFAILGEQISKLNHKINKIRQYILSSKNGILSVEKKITELKNQGQNVPVQYEKALKDF
                     SLQNLELNKLQNEEKELLERKKSLQLELINLQKMLFEATFINKSGKWTDMNEIKFSLL
                     EPKEDIFCSSFVNESAKFIGIKKVIQNNQESIEIHKKLDYEEKDIAWLSASKE"
     gene            16032..16583
                     /gene="ruvA"
                     /locus_tag="RJ239_000958"
     CDS             16032..16583
                     /gene="ruvA"
                     /locus_tag="RJ239_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HDV7331086.1"
                     /translation="MVVGIEGIITKKEPTFIIVKCASGLSYGIFISLFCSAKIQTQEK
                     HEFFITQIIKEDSNKFYGFLDKDEQKMFEMLLKVNGVGANTAMAVCSSLDVNSFYKAL
                     SLGDESVLKKVPGIGPKSAKRIIVELSDTKTKLENVSDDKSEALAALLTLGFKQEKII
                     SVLVSAQATGTSELIKEALKKLG"
     gene            16593..17633
                     /locus_tag="RJ239_000959"
     CDS             16593..17633
                     /locus_tag="RJ239_000959"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HDV7331087.1"
                     /translation="MKFAILFGGNSYEHEISIVSAVVLKKVINQNLEFIFCDKERRFY
                     HIPSEKMNSKTFSTKAYKKEKELFIKQGGFFSKGFLKENKLECECVINLIHGRDGEDG
                     KIAALFEFYSIKFIGPRLEASVLSFNKELTKLYAKSVGVKTLDYTILRKNQNSKEKLS
                     FPCIIKPARLGSSIGISIVKDEKDLEYAKDVGFEFDNDLVVEEFKNNIKEYNLAGCMI
                     NDEFVFSIIEEPKKKEFLDFEQKYLSFSGHNELIEADLSEELKEKLKDSFKKIYNPLF
                     KGALIRCDFFILDNEIYLNEINPNPGSLANYLFKDFNTTLNALADQISLEKMIKINYN
                     FLHSINGQKGKL"
     gene            17693..17908
                     /locus_tag="RJ239_000960"
     CDS             17693..17908
                     /locus_tag="RJ239_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HDV7331088.1"
                     /translation="MLSFKQDEIYTATEVVRNFSPIMEKLKKSESGKIVILKNNKFEA
                     VMLSMKEFERLQNAMQLLENIYKNQKA"
     gene            17910..18629
                     /locus_tag="RJ239_000961"
     CDS             17910..18629
                     /locus_tag="RJ239_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDV7331089.1"
                     /translation="MAQTQLSYKNKTYQISYEILGDLSLPQILILHGWGADKKLMKQS
                     FCPFLKDFCQIYMDLAGFGNSSVEEILNTQDYANITELFLKQKKLNVCFFMGHSFGGK
                     VSTLLAKEKDTLILLSSAGILAKKSLKVRFKIRIFKILKLFGLGKFYRYFASKDGANL
                     SPIMYETFKKVVDEDFSEIFAKQKAKSLIFWGKSDEATPLYCGEKMHQFLKNSTFYPL
                     EGDHFFFLKHSAFIAQKIKEI"
     gene            18630..20057
                     /locus_tag="RJ239_000962"
     CDS             18630..20057
                     /locus_tag="RJ239_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HDV7331090.1"
                     /translation="MLINTLYFINSLFFNFCIAFYLMSALQWYSYKFKRVFFHYHKPL
                     WHLYFLFIPYFLFLAFPLYSLVYFALIHTPILYFWNKGIDKKLVFTSKVKWFFVFVFV
                     YNAIFTILALRFSFLFNLFSLPFALLSLKIYEFFTNLYYKKQAKAKLRANENLKIILI
                     TASFGKTSIKNFLYELLKDDFKSYKTPRSVNTLLGIVADINANLSQDTQIYIAEAGAR
                     LKGDIDEITHFLQPQISIVGEIGNAHLEYFKSVENIRSTKLEALNSERLEKAFLHSST
                     QKEEDKLISLYDDKLSLIHSSLEGLEFKVDIENKSYDFKSQILGDFNAQNLCVCILCA
                     HYLGIKLEKIQKQVLNINSVEHRLQVLSREPKFIIDDGFNGNFKGMSTSYKLCKSYKG
                     RKVLVSPGIVEVSEEENIKLAKIINECFDLAIISAQINAEIFKKELKIKTIILKEKSQ
                     LVQTLAKETKHGDLILFSNDAPSFM"
     gene            complement(20115..>20784)
                     /locus_tag="RJ239_000963"
     CDS             complement(20115..>20784)
                     /locus_tag="RJ239_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331091.1"
                     /translation="GISELSSDKTIGIMPKNYDKLTITNYYNTQEQYNEAEQLGMFGH
                     INIGLQPLNFTPQSMQTQNLDKDTAIDTFNPDMSVYPQNEDGSYSKEALFMSFLKSTG
                     VSPREGSATLNPIAKSYAEAMAKESFDGSLASLDDIMTGKVDFASLLKGYAQEGWLDA
                     DIYAMDKGVAWQNTSIGYGGAWFDREFNQVKANGWKASSESINSYVGSIMDRLNNLMG
                     QTRV"
BASE COUNT         7413 a         3522 c         2667 g         7182 t
ORIGIN      
        1 cttcactaaa acttgtttta tcatttgaaa agctttgacc tagagcatta gaaaaaagat
       61 tataatattg ttttatagta tttgctatat ctatattaga ataataactg cttacgccta
      121 agtattcttt tgtacttgaa acaacaggat cattttcggc agctttttta atctcatcca
      181 aagtagattt atgtatctta aaatcttcag gaagtcccgc agctttatta aaatcacttc
      241 ccatataacc atctttatct acactataac cataggctgt attagtagaa gtattactta
      301 tatctacttg tttgtatttt agagtataaa tagagttttt aaattcacta gatatatcat
      361 aattaggaga acttgtctta ctacttatac taaaattagt attattgcta gtatttgttg
      421 tattagtaga atttaatgct tcacttcttg ctagagtttg tgaatttgca ttttgaattt
      481 catttaactt actagcattt tgttttaaaa aagcattagc aaaacttatt ttagaatttt
      541 ctttactttc tttactctct ttactttgca tagtttgagt tatcattgat actaaagata
      601 ctcatattaa ttccttgatt tagatttttt gccttcaacc taaatatatt aaaataatat
      661 aagcaagatc tgttccgttt tggggtggag ttatttttct aaataaattt ttaaagccct
      721 ttcatagtct tctttagtat caatccccat gcttgttgtt gaaatttcaa gcattttgat
      781 ttttttacca ttttctatag ctcttaactg ctctaatttt tccgctcttt caagtgcaga
      841 acttgataaa gaacaaaact cccttaaagc tttgacacta taagcgtaaa tgcctaaatg
      901 ccctttaaaa ctttcctcgt aattttctct ttcataaggg attttagctc ttgaaaaata
      961 caaggcatac ccttctttat cgcaaagcac tttaaccaga ttaggatcca tagcttcttc
     1021 ttgagtgatt tttttataac aactcgccat aaaagctttt ttatccaagc aaaaacttgc
     1081 aaattcttta aattttaata aattttcaca ttctataaaa ggctcatcag cttggacatt
     1141 gataataatc tcatcatctt ttaaagctag tttcttacaa gcttcattaa tcctatccgt
     1201 accgctttca tgatctttgc ttgttaaaac cgcatttaga ccatattctt tagcgatact
     1261 taaaaccttt tcatcgtcta aagctataca aacttcatcc acgctactta ctcttcttgc
     1321 agtagccaca aacataggca ctccacctat atcacataaa attttctcat gaaaacgact
     1381 tgattttaat cttgcaggaa taataatcat ttttgcatcc aatctaaaat ttcttttttt
     1441 atatttctgg cttcaaatac cttttcatcg ctatttttca aatcaaataa agccaaaatt
     1501 tcatctttaa cttggacatt aaactcttta gctataaatt ttaaatcttc tttttcattc
     1561 ttagaatccc tatcatataa agcttttatc atacttggag taaattttgt ccattctgct
     1621 gtagaagtga taatgctagg ttttaaagga tcaagcattt taaaacaagt tgcggtatgc
     1681 ggatcgatta aaatcttgct ttgtttgata aattgcatac attcttcatc ggtgcaaaaa
     1741 tccgcctcaa aatcttcttg caaactttgt aattcttctt tttcaagttt aaaatatctt
     1801 tcatttttta acaaattcat cagttcttta gttcttttat ctttaaattt cgcaaacaaa
     1861 agtctttcga tattagatga aataagtata tccatagctg gagaaatagt cttcttaaga
     1921 cttttttcac gcaaatcata aacgccttga ttaaaaaatt cactcaaaat attatttgcg
     1981 tttgaagcga ttttgatttt tgaaatttta gctcccattt ttttagcata aaaagctcct
     2041 aaagcattgc caaaatttcc acttggaacg atgatttgta cttcttctaa aaactcatta
     2101 aaaagtttta aactcgcata ataatgataa ataatctgaa ataaaatacg cccaaaattt
     2161 acagaattag ctgcgcaaag ctcataattt aaagctttaa tttcattttg aaaatctttt
     2221 gaaaaaagca attcttttaa agtgcgttgc gctgcgtcaa aatcctcatc tatggcaaaa
     2281 actttcaagt tatccttatc taaagctcgc atttgcaact cttgaactcc acttgtgcca
     2341 ccttttggat acatacaagc tactttaaca ttttttgcat tttcaaaact ttttagggtt
     2401 gcaggccctg tatcgccgct tgtagcacag ataattaaaa tatttttatc ctttgaaaat
     2461 tcgcttaaaa gcacgccaaa aggctgtaaa gccatatctt taaaagctct tgtaggccca
     2521 tgccaaagct cgttaatata ggttttttca gagatttttt gcaaagaaat aggtgtattt
     2581 ttatcatcaa agctttcgta acttttcaaa gcctttttaa aaagctcttc ttcgccaaaa
     2641 ccaaaacttt ctataagctt taaagcaaaa tctttataag acaaattggc atatttttct
     2701 ccttcaaaaa taggcaaatt taaaggtgag taaagccctc cttctggagc gtttgggtta
     2761 atcaaagctt ccttaaaact tgatacatta tttacatttc tactctcgac caatttcact
     2821 gttcaaactc cttgatataa gtttttattt tttctcttaa tgaatctttt aattctatat
     2881 ttaattctat aatttgacat ttaaaaccaa aatctttaac tttaacaaaa tccttaaaag
     2941 taagcattag tgtatcgcaa ttatgttttt ttagcaaatt ttctaattct tcttttttaa
     3001 actcataatg atctttaaaa aaataacaag cccttgcctt gataaaatgc tcatacaatc
     3061 taaaaggttt agcaatagca gttaccaaaa cagcctttgg attttctttt acaaaagaat
     3121 aacgcacaaa atccctgcct tctaatgcaa taaaatcagc ccttttttca taaaatttcg
     3181 gcaaacgata agctccactt ggtaaggtaa aattaaaata aggtttgatt ttactttcaa
     3241 gtaaaatatc aaatttttta atatgaaatt tagaaaaagc atcatcaagc acaacgattt
     3301 tagctcccaa ttcaaaagct ttttcaatac cttttactct atcttcgctc acaatcacac
     3361 ctttgatatt ttcttcaaaa gcatactcca tagcttcatc gccactttgt gttaaggtgc
     3421 ataaaatttc attttgattt ttaacaacaa acaaaccttt agactttctt ttatagcccc
     3481 taagtactat aaaaacacca tcaaattccc ttgctatagc tttacaaagc ggggtttttc
     3541 cattacctcc aaaacttaaa ttaccaacgc taataacagg ctttttaaaa actatttttt
     3601 tacgaaaaaa agtatttaaa atcgcaaaaa aagcataaag cacacttaaa ggtaaaagta
     3661 taaaagcaag gcatttttgc caaaaattgg gcttaaaaaa ataattatca agccaaagtt
     3721 cataattttt ttcttcattc attgtttaaa tttccaaaat ttcaggcatt tttcccttaa
     3781 aagcattttt ttgcatgcga ttttttaaca tagcaatcaa agaaggatca agtgttctta
     3841 aaagtttttc atcattagtt tctaaagctt ttaaaccttc atcgattttt gtataagaaa
     3901 aacctaaatc cgcctcatca ctttgatttt cccaaagatc cgcacttgga gcttttttga
     3961 tgaaattttc atgcaagtta aggtattttg ctaaggcata aatttcactt ttataaagcg
     4021 atcctatagg attaaaagca caagctaaat ccccataaat cgtaccataa cctaaaagca
     4081 attcgctttt attagaagtg cctatgacta aagaattttt caaagcagaa taatcataaa
     4141 gcaaactcat tctaatacgc gctgcaaaat ttcccaaaga tactagagtg gtattttcac
     4201 tttgctttat aaaagcatct aaaatgcttt gaatttctat gattttatat tcaagattta
     4261 aatccgcaca aagccttaaa gcatcttcaa gattggcttt gtttgaaatt tgagttggca
     4321 ttaaaagagc aaaaacattc tcttttaaag ctcttttaca aagcgttgct accaaagcag
     4381 aatcaatccc gccactaagc cccaaaacca caccttgact ttgagaattt ttcacttttt
     4441 cttgtataaa atcacacatt ttttccgtaa tcttttgcca atccataaag cttgcctttt
     4501 aaaaatttaa tgtataatta tatttattta aggcaaattt tttattaaag aggtaaaaaa
     4561 tgcaaattat caaacaagct tgtggagttt atgaaactaa ttgctatatt ttatttaccc
     4621 caaagggtga atttatcatt gatccaggaa ctgatgcact tttatttatc aaaaaacatg
     4681 taaaaaaacc tttggcgatt ttaaatactc acgggcatta tgatcatatt tgggataatg
     4741 ctaaggttaa aaaagaatac aacatcccca tttatattca taaaaatgat gcttttatgc
     4801 tacatgatga tttcaatcaa ggctatgatt ctagcgatgc ggatttttta gtagataatg
     4861 aagatatttt aaatatttgc ggagttgatt ttaaatttca ctttttacca ggacatacac
     4921 caggttgcac tatgatagaa attgtaggta aaaatatcat gtttagtgga gattttttat
     4981 tttatagaag cataggaaga tgggattttc cttattcaga tgcaaattta atgaaacaaa
     5041 gcttagaaaa agttatgact tacaaagaag attttaaact tttgccagga catggacaag
     5101 aaactacttt aaaagaagag caagtccatc taccctcttg gcttagatat ttttaaggta
     5161 tattaaaatg gaattagatc aaattttatt atatgctttt atttttttaa atctttttgc
     5221 cctttttggt ttatttttgg gaaataaaaa gaaaaatcaa tttaatgata aaaaatttta
     5281 taaaatctgc ccatgtaaaa aaatggcaga aaatggatct ttaagtacga tttgtattta
     5341 ttcagctgta ggaggatttt tttacagcgt attatctata ggttttatag gttttggtaa
     5401 ttggacttta aattttattt ttttacttgc attattaagt gtttttttag ggtggaaatt
     5461 aaaacttgat tgaaaaatat ttttaagaaa aatccattga tttttcttaa tttttattta
     5521 aaagttgtac caccatcaac gatgaaagta tgtcctgtca cccaacttgc cttacttgaa
     5581 caaagaaaaa gacatgctcc agccaaatct tcaggctgcc ccatgcgatt taaagggctt
     5641 aaatttatag tagcctgttt tacttcttca taatttgtaa aagctcttaa agcatcagtt
     5701 tcaataggcc caccacttac gacatttaca cggatatttt tttctccaag ttcagtagcc
     5761 gcatatcttg ccatagcttc tacagcggct tttgctgtac catgacctga ataattttct
     5821 atatacacta aatttcctgt agatgagata gaaataatgc ttccaccccc tactttttcc
     5881 atccttttag ctgcttcttg tgcgcccaca acaaaagcat ttactgtggc tgtaaaaatg
     5941 ttattaattc cctttggttt taacttcata aatttagtat agccacctac aaccgcacgt
     6001 cctgaaatga tagcatttga gataaaataa tccactctat caaaatccac atcaattttt
     6061 tcaaaaagtt ctttataggt ttcaggttct aagatattaa attcataagc tctagctttg
     6121 attttataat ttttctccaa atcttgaacc atttcatcag caatttgcgc attagaatta
     6181 taagtaaaag ctatatttgc acccacttta gcaaattcat aaactatagc tttgcctatc
     6241 ccgcgagttc caccgctaat cactaaagtt tttccttgaa attctgtatt cattaaaatc
     6301 ctttgatctt atattttttc atcacttctt caattttagc aaaattttcc ttacttggag
     6361 aacaaagagg aagtctaaat tccaaacttt ctatcaatcc agctaaatac atagccgttt
     6421 taataggaat aggattactt tcgcaaaata aaattttatt gatattataa agctcatcat
     6481 tgattttttt agcttcttta taattttcat ctaaagcaaa atgagttaaa gcgctaatca
     6541 tatcgggtaa taaatttgaa gttactgaaa tcactccctt tccaccattt gaaagtatag
     6601 gataattgat cgcatcttcc cctgaaataa gcatcattct aggttcgtgt gcaagcaaat
     6661 ccacacactt atcgatattt ccactcgctt cttttactcc ataaatattt tcacaatctc
     6721 taaaaagctt gataatagta tccgttgaaa tttcacaacc tgttcttcct ggaacattat
     6781 ataaaagcac aggaatatct acactttgcg caatagcctt ataatgctcg taaagtcctt
     6841 gttgcgtagg tttattataa tacggtgcca cacttaaaat cccatcagca ccatgctctt
     6901 tagcaaattt agccaaaccc actgcctcat gagttgcatt acttcccgca cctgctaaaa
     6961 ccttaacttt agttccttta caagtctcaa cggctatttc tatgcaagtt ctatgttctt
     7021 catgggttaa agttgcactt tctcctgttg ttcctactgg aactactgca tcgatgccat
     7081 tttctatttg tcttttaatc aatcttgcat aactttgctc atcaactttt ccatttttaa
     7141 atggtgtaat aagagccgtc atcgccccaa tgataatatt tttatccatt tgaatccttt
     7201 cttagaatta ccgtagttga attttcttga ataaaatatt ttttagcaca agaaatcaaa
     7261 tcttttaatt ccaaattttg tatatctttc tcataattta acaaaggatt gatatctcct
     7321 cttgctagat atgaaccata aatatttgcc actgcactag cattgttaag tgagaaaata
     7381 aaatcacttt tgacattatt tttcactctt tgcaaatctt tttgagaaat tttacccatt
     7441 ttaagtttat caatgatttt taaaagctct ttttctactt tttctgcatt aacattgggg
     7501 ttacaattac aaataaaaat aaataaattt tcatctatac aatcattaac ataagcataa
     7561 taatcattga ttaaatttaa tttatcaatc aaaatttcac tcattaaaga acttttccca
     7621 cttcctaaaa gctcggataa agcatttaaa gcaggtatat ctttgtgctt gaaatttgga
     7681 attttataag caagggctaa tagttcagta tctgagtttt tatgtaaata tattcttttt
     7741 actccatctt gcttaggctc ttttgtgtga attttaggta tagtcttagt atttttaatc
     7801 ttttcaaaat gtttttttga aagctcaaaa acttccttac tttctatatc gccacttaca
     7861 agtaaaatcg catttttagg ttgataataa atactgtgaa attctttaat atcttcaata
     7921 ctccaatttt ctatatcctt aaaaaaacct ataggagtcc aatgataagg atgatacata
     7981 aatgcatgat taaaaagcct aaaataaaga tatcctaaag ggttattatc tgttctccat
     8041 ctacgctctt ctaaaaccac tgctctttca ggctgaaatt cttcatcttt taaatttaaa
     8101 ttcgccataa gttctgcaaa aagctctaaa gctttatcta aatttttctt cgcacattta
     8161 atataataat gagtatagtc aaaacctgtg cttgcattat ccacaccacc aaaaccctta
     8221 acaatctcat caaattcgcc agcttttaaa tttttagtac ttttaaaatt taaatgttct
     8281 aacatatgag ctatgccact ttttcccatg atctcatttc ttgaacccac tttataaaaa
     8341 atatcaacgc taatcacatc gctattttta tttacaggca aagcataaac ttcaagcttg
     8401 ttttttaatt gaattttttc ataagcaatc attttaaatt taccccaaca gcttcgctaa
     8461 tgtgtaaaaa accatctttt cttaaaagct ctataagatt ttgattgata ttttttacca
     8521 aagaaggacc tttaaaaatc aaagctgtat aaacttgcac caaattagcc ccatttttaa
     8581 tacgctcata agcaatatca gcactatcaa tccctccact tgcaataagc aaggttttgc
     8641 caaaaagaat tttagttact tctttgaaaa aaataccact tttttccgta atcagtcttc
     8701 cactaatacc accaaaagta cgattattat ctaataaact ataatcaaca ctagtattgg
     8761 ctaatataaa cccatctgca ccttttttaa tggcattttc acataaattt aaagcatcat
     8821 ctattttcat atcaggagca atttttatca aaataggctt agaagtgatt tttttggctt
     8881 cttcaagcaa ggtatttaaa aaatcatcat tttgcaactc tcttaaattt ttagtattag
     8941 gagatgagat attaacgata aaataatcac acaaatcctt aaaatctcta aacaaagtaa
     9001 aataatcctc caaggcttta tcatttggag tgattttatt tttccctata tttaccccta
     9061 aaggcaaaac aaaaggatag gtttttgcaa gtcttaaagc aatcttttca gcaccttcgt
     9121 tgttaaaacc catagcattt tgtatacttt cttgttttac aagtctaaat agacgtggct
     9181 tttcattgcc ttcttgaggt tttggagtaa aagttcccac ttctaaaaag ccaaatccta
     9241 aagcactcaa aggtcttatc atagtggcat ttttatcaaa gcctcctgct aaacctacag
     9301 gattattaaa atcaagtcca agtaaatttt gccttaaact ctcatcatca actatatatt
     9361 tgtgtgctaa aaaacttaaa gctcctggaa aactggcact taaagccctt aagctatatt
     9421 caaccaaagc atgtgcatgc tcagggttta acttaaaaag taaaagtttt atcatttcat
     9481 aagccatttt ttaatccttt ttgaaattct aactaaaatt aactaaagct gggctttgtt
     9541 ttttctttgc ttttaaattt ttgatacaaa gaacaagttt gcaaaagctc ttcatcttta
     9601 cctattgcca ataccttacc cttatccaat actactattt tatccgcatt ttctatagtg
     9661 cttaaacgat gtgcaaccac taaaatcaat ctatcttgtt ttaaattttc tatagtttta
     9721 actattgctt tttcactttc attatccaaa gctgaagttg cttcatcaaa aataagcaca
     9781 tcaggatttt tatataaagc tctagcgatt gctattcttt gtttttgccc tccacttaag
     9841 ttcttaccat gttctttcac ttcagcccaa atcccgccca tttctttaac aaattcataa
     9901 gcattggcca attttaaagc ttggatgact ttttcttctt ctaactcttc gctataagca
     9961 atatttgcag caaaactatc attaaaaaga taaatatttt gcgttacaag tcctatttta
    10021 gcatgtaagc tttctatggt aaaagtgcta atatcttctt gattgagtaa aattttacct
    10081 ttttgctttt cataaaaata catcaaaaga ttaataatag aagatttacc acccccactt
    10141 gtccctacaa gagcaagcat ttgcccttta acaaaatcaa aatttacgcc ttttaaaaca
    10201 cttttatgcg ggttttcata agcaaattca acattttcaa agctaatttt ttcaatgttt
    10261 tttaattctt tgcttccacc tttaatttga ggttctaaat ccaataaata aaaagttctt
    10321 tcacttgccg caacagcacc ttgaagtttt ccatataaag acgaaagacg ctttaaagga
    10381 gtatatatcg caaaaagtgc cgaaacaaaa ctgataaaac ttcccacact catagaacca
    10441 ttgataacct ctctaccccc tacaataatc accacagcaa ccccaacaga acccatcata
    10501 tccattaaag gacttgtaag tgcatcaata cgtgcggatt ttaggtttaa tttacataaa
    10561 gtatcattat gcttagcaaa tttatcactt tctttttttt cattatcatt agctttgatc
    10621 aattcaatat ttgaaaaaat ttcacccaaa taagaaagta aatccgaatt tgtttcttgt
    10681 atatttcttg catatttttt aagtttttta gcaaaccata ccaaaggaaa aatagctaaa
    10741 ggcaaaatca ctaaagcaaa aaaagccaaa gtaggacttt gatacaagac taccgcaagc
    10801 agtcctatag cagttaaaag ctctctaaaa aaatcaggaa taatgtttga tactatgctt
    10861 tgaagtgcat taatatcatt agtacaacga cttacaagct ctccgcttct atagcgttta
    10921 aaaaaatcca tatccaagcg taaaacattt tttaaaaccc tagcacgcaa tactcttaac
    10981 atatctgttc ctataaagga aacataaaaa ctttgtaaat aagttccaag atttttaaaa
    11041 aaatacatca atactagcaa aaaaggtact gtataaagta aagcttcatt tttttcaacg
    11101 aaaatataat ttaaaatagg ctctaaagca taaaaacttc cagcagttcc tccgcttgct
    11161 aaaatcatac caaaaatagc tatagcaaat tgtttccaat atcttttata aaagggctta
    11221 aagcgtatta aaacctcttt taaattcatc tcattatgca tttattttct cccaaattgt
    11281 tccatttgga gtatctaaaa gagtgatttt tttactattt aattgctctc ttattgcatc
    11341 agctgtgtta aaatctttgt ttttcttagc ctcagttctt tctaaaatta acttttcaat
    11401 ctcttctcgt tcttctttgc ttacacccca ttgaaaatat aaagttgcat ccataaaacc
    11461 aaagccaaaa attttagcta gctcacttaa agcttctttg atattttgtt ttaaaatttt
    11521 atttttgctt tctttatcca actctaaatt tgcactactg ataaaatcat ccaaaagagc
    11581 taaggcttta gaaacattta aatcatcatt taaaatctct aaaatttgct tagcaatttc
    11641 gctttttatt ccaatatcat ttaaaacatc aaaatcagaa atttcaccta aatccaatct
    11701 ttttttaagg cgataaaatt tatctaaacg ttttttagca ttttctaaat ccgataaaga
    11761 ataattaaaa tgagatctat aatgagaact caaaagataa aatcttaaag cctcgcccat
    11821 aaattctttt aaagcatctt ttataaaaaa actattattt aaacttttac tcattttttc
    11881 gccatcgatt tttacaaaac cattgtgaag ccaaatattt gctaattttc tcttacatcc
    11941 acaacgacat tgcgcagctt cattttcatg atgaggaaaa agcaaatcta tccctccagc
    12001 atgtatatca agggtatttt caaaaataga atcaatcata gcaacacatt cagtatgcca
    12061 acctggacgc cctttgccaa attcactttc gtaaaaattt tcatcaaatt tccaaagcac
    12121 aaaatcgctt tcatttcttt tttgcacttc attacttaga cgagagatat tttcttctaa
    12181 attgcgattt gataggctta aatatttttc atctttactt gtatcaaaat aaattccatc
    12241 ttctagagta taaacaaacc catccttagc aagcttttta atcaaatcaa gcatagctgt
    12301 tatataatgc gttgcacgag gtttaaaatc aggatctaat acatttaaaa ccctcatatc
    12361 ctcttcataa cttttgatat aaaattccgt aatttcctct aaagtttgac cactttgagc
    12421 catttttttc aaaatcttat catcaatatc tgtataattt ctagcaaatt ttaccctatt
    12481 gccttgagca agtaaaaccc tacgcaaaag atcaaaacaa acactacttc ttgcatgtcc
    12541 taaatgtgca tcatcataaa ccgtaggtcc gcataaataa atactaatat cttttttatc
    12601 aagttttatt ttctcttttg ttacactatc taataatctc attaaaaaac tcctttaaaa
    12661 cttgtaaaaa ttcctataaa aaaacttaaa atataaggtt taatcaaaat aagtaagatc
    12721 gtaaaaacaa tcaaagcaac tataaccaat aagcaaattt taatagatat taaagcaaaa
    12781 aatttcttaa aaccaaattc tttgatatta gctccaagca aataaaaagc actaatagag
    12841 cttgaaagtg ctactgcaat aacctttaaa ctttcatctt taatcaaaaa tataaaagcc
    12901 atagaacata aagcactgat aattaaagat tttaccgcga tccaagctgc tgttttttgt
    12961 ttaaattttg cataaagcca caaagaaaaa agcttttgca aaccaaaagg taaaagccct
    13021 ataagataag caatcaaaac ataagccgta atcacactat cttcgtgagt gaaatttcct
    13081 ctttcaaata aaagctttga aatttccaaa gcaaacacag aacctacaat actagaagca
    13141 ataagcaaaa tgcttaaaag cgctaatgct ctttgcataa attttaaggc taaattttct
    13201 tgatcacttt ttaaatgttt taaaattttt ggaaaagaaa cttgagttaa agcaatagca
    13261 aaaagtgcca gggggagttg gaagacacga tttgcataat aaagataaga aatactcccg
    13321 ctcattaaaa aactagctat agttgtatca agcaatgagc taaattgagt cgcagaagaa
    13381 cctaaaactc catgaaaaaa attgccataa aaaccttgta atttcgcctt ggttttttta
    13441 aattttatac ttaaagtcat agcacgtatt acaggattgt tttttaaaac aagcaaatgt
    13501 aaaataagct gtgccacccc acttaaaacc gttgcataag aaaaataata aagtgtattt
    13561 tgcggtgcat ttttatccac aaaaaaggca gctataacaa tacttaagtt aaataatgcc
    13621 gcagaaaaag aggtaatgaa aaatttttgt ctataattta aaatagctcc taaaaaagta
    13681 actaaaaaaa taaaaaacaa ataccaaaaa ttaatcgcca ccaaaggagc cgctaaagct
    13741 atagtatctg cgttaaaccc aaaagcaaaa agcttagtaa aaaaagagga aaaaaaactt
    13801 accaaaagac aaaataaaaa aactataagg ctaaattgca tcattacact aacgcaaaaa
    13861 gctccctttt ttttcgcttt tacaaaatta ggcaaaaaac tttgtccaaa agccccttct
    13921 gcaaaaattc ttctaaaaaa agcaggcatt tttaaagcca caaaaaaaat atcactataa
    13981 agccctgctc ctaaaaaaag cgctattaaa acatctctag caagccctaa aattcttgaa
    14041 aataaaattc ctaaagcatt gataataaaa tttttaaata ctaaactctt cattaaattt
    14101 tttcataaat ttcaaaatat aaagagaact attttaacta aaattgatta aaaattgact
    14161 ataattacat tcttaatttt ttacaagggg aaagttttgg ctttggatga aaaaattatt
    14221 gcctatacag aaaatccagc tcgagagctt ttaagcgtag cttcacgaac aaaccttagc
    14281 ttaaatgagc ttgattttag tttattggca ttttctacac aatatcgttt tggagattta
    14341 gaatgggaaa aaatctctga aaaagaatta actctttttg ataaagatga aattttttta
    14401 aaaaatgatc ttcaaatcaa gcaagaatac aaaatagaaa ttttccacgg tataaaccaa
    14461 agcaaagcat ctcaagcagt caaactagtt gcaaataaaa atttaaccaa aatagttgct
    14521 caaattgatt ttacaaattt agactttcat gaaaaactag cactagaact tttgcaaaat
    14581 atttataaaa agatgttgaa acttaaattt ttaataggta tccgcatttt tgattttaag
    14641 aaaaaattaa tgtctttttg caaccaatat aaaaacaccc ctttaaataa aactatacaa
    14701 atcaccgttg cacaaggtat tgatcctata gaaagtcaag atgaatctct gatcttgact
    14761 tataaagaaa aaaccaaaaa ctacactatc gatgaaaaac gctcaggtat tattgttgtt
    14821 gatgaaaatg aagttgtttt aaaacacgtc aaatttaaac aaggtaaaga aggaaaagac
    14881 ttaaatttac acaccttaaa agttttagct gcaaatgaaa ataaagttaa attttcttgt
    14941 tcttcggctt ttaaacaagt agagcaagat ggatacacag aatatatagc cttaaaaaaa
    15001 ggttatgtag tacaagatgg tgaaaaattt gatatcgcca atgaactaga ttttaatggg
    15061 gtagatttta aaaatatagg gattataaga gctggactag acaaaaatgt caaaatcaat
    15121 ataaaatttc tttcagaagt aaaagatgct gtaaattctg gcgttgggat agaatgtgaa
    15181 gaattaaatg tagtcggaag cgtaggaagc aacactcaac ttaatgccac caaaatgaaa
    15241 attgaaggca ctacgcactc taaagccaaa attcaagcca aacaagccta tataaaaact
    15301 catagaggat ttgcggaagc cgaaatttta aatatagatt tgctcgaagg tggaacaatc
    15361 aaagccaaag aagtgagaat taaaaaaagt ttaggcggaa atatacaagc tgataaaatc
    15421 tatatagaaa atttagaaag taataattct tgtgtgtttt ttgaaaacac cacaatagaa
    15481 cgcattaacg gggataacaa taaatttcat gctaaaatta aaactcttga taaaaattat
    15541 gatgaagaat ttgcgatttt aggagagcaa atttctaagt taaatcataa aataaataaa
    15601 ataagacaat acattttatc aagcaaaaat ggaattttaa gcgttgaaaa aaagataaca
    15661 gaacttaaaa atcaaggtca aaatgttcct gtacaatacg aaaaagccct aaaagatttc
    15721 tctttacaaa atcttgaatt aaataaacta caaaatgaag aaaaagaact tcttgaacgc
    15781 aaaaaatctt tgcaattaga attaatcaat ttgcaaaaaa tgctttttga agcaactttt
    15841 ataaataaaa gcggcaaatg gactgatatg aatgaaatca aattttcact tctagagcct
    15901 aaagaagata ttttttgctc ttcatttgtt aatgaaagtg ctaaatttat aggcattaaa
    15961 aaagtcatac aaaacaacca agaaagtata gaaatacata aaaaattaga ttatgaagaa
    16021 aaggatatag catggttgtc ggcatcgaag gaataatcac aaaaaaagaa cctactttta
    16081 tcattgttaa atgtgctagt ggtttaagct atgggatatt tatttctctt ttttgttctg
    16141 ctaaaattca aactcaagaa aagcatgagt tttttatcac tcaaatcatc aaagaagatt
    16201 ctaataaatt ttatggcttc ttggataaag atgaacaaaa aatgtttgaa atgcttttaa
    16261 aagtcaatgg agtgggtgca aatactgcta tggcggtatg ctctagtctt gatgtaaatt
    16321 ctttttacaa agcgttaagt ttgggcgatg aaagcgtgct taaaaaagta cctggcatag
    16381 gtccaaaaag tgcaaaacgc attatagtag aactttctga cacaaaaacc aaacttgaaa
    16441 atgtaagcga tgataaaagc gaagccttag ccgcacttct tactctaggc tttaaacaag
    16501 aaaaaatcat aagtgtttta gtaagtgctc aagcaacagg cacaagcgaa ctcatcaaag
    16561 aagctcttaa aaaactagga taaaggaata aaatgaaatt tgcaatactt tttggcggaa
    16621 attcttatga acatgagatt agtatagtaa gtgctgtagt gcttaaaaaa gttatcaatc
    16681 aaaatttaga atttattttt tgtgataaag aaagaagatt ttatcatatc ccaagtgaaa
    16741 aaatgaattc taaaactttt agcaccaaag cttataaaaa agaaaaagaa ctcttcatca
    16801 aacaaggagg tttttttagc aaaggctttt taaaagaaaa taaactagag tgcgaatgcg
    16861 tgatcaatct tatccatggt agagatggag aagatggaaa aattgcggct ttatttgagt
    16921 tttattctat taaatttata ggacctaggc ttgaagctag tgtattatct tttaacaaag
    16981 aacttaccaa actttatgcc aaaagcgttg gagtaaaaac acttgattat accatactaa
    17041 gaaaaaatca aaactctaaa gaaaagctta gttttccttg cattatcaaa cctgcaagac
    17101 ttggaagtag tataggtatt agtatagtaa aagatgaaaa agatttagaa tacgccaaag
    17161 atgtaggttt tgaatttgac aatgatcttg tagtagaaga atttaaaaac aatatcaaag
    17221 aatacaatct tgcaggatgt atgatcaatg atgagtttgt tttttccatt atagaagagc
    17281 caaagaaaaa agaattttta gactttgaac aaaaatatct tagcttttca ggacacaatg
    17341 aacttataga agcagattta agcgaagaat taaaagaaaa actcaaagat agctttaaaa
    17401 agatctacaa tcctttgttt aaaggtgctt taatacgctg tgattttttt atactggata
    17461 atgaaatata tttaaatgaa atcaacccaa accctggttc tttggctaat tatcttttta
    17521 aagattttaa taccacttta aacgctttag ctgatcaaat ttcacttgaa aaaatgataa
    17581 aaatcaatta caacttcctt cactccatta acggacaaaa aggaaaatta taagctttta
    17641 agtcaaaatg cgctaaatta tacataaaat ttagcgtatt ttaggaagaa aaatgctctc
    17701 ttttaaacaa gatgaaattt acactgccac cgaagtggta agaaatttta gccccattat
    17761 ggaaaaactc aaaaaaagcg aaagtggaaa aatagttatt ttaaaaaata acaaatttga
    17821 agctgtaatg cttagtatga aagaatttga acgcttacaa aatgccatgc aacttttaga
    17881 aaatatctac aaaaatcaaa aggcttaaaa tggctcaaac tcaactttct tataaaaaca
    17941 aaacttatca aatttcttat gaaattttag gtgatctttc cttaccgcaa atacttatct
    18001 tacacggctg gggagctgat aaaaaactta tgaaacaaag tttttgtcct tttttgaaag
    18061 atttttgtca aatttatatg gatttagcag gttttggaaa ttcaagcgtg gaagaaattt
    18121 taaacactca agattatgcc aatatcacag aacttttttt aaaacaaaaa aaactcaatg
    18181 tctgtttttt catggggcat tcttttggtg gaaaagtaag taccctactc gcaaaagaaa
    18241 aagacaccct aatcttactt tcaagtgcag gaattttggc taaaaaatcc ctaaaagtgc
    18301 gttttaaaat ccgtattttt aaaattttaa aactctttgg tttgggaaaa ttttatcgct
    18361 attttgctag taaagatgga gcaaatctta gtcctataat gtatgaaacc tttaaaaagg
    18421 ttgttgatga ggattttagt gaaatttttg ccaagcaaaa ggctaaaagc ttgatttttt
    18481 ggggaaaaag cgatgaagct acgcctttgt attgtggtga aaaaatgcat caatttttaa
    18541 aaaatagtac tttttatcct ttagaggggg atcatttttt ctttttaaaa cactctgctt
    18601 tcatagctca aaaaatcaag gaaatttaaa tgcttatcaa tactctttat tttatcaatt
    18661 ctttattttt taatttttgt atagcttttt atcttatgag tgctttacaa tggtattctt
    18721 ataaatttaa acgcgtgttt tttcattatc ataaaccttt gtggcatttg tattttttat
    18781 ttattcctta ttttttattc ttagcttttc ctttatactc tttggtatat tttgcattga
    18841 tccatactcc gattttgtat ttttggaata aaggcataga taaaaagctt gtttttacaa
    18901 gtaaggttaa atggtttttt gtttttgttt ttgtttataa tgctattttt accatccttg
    18961 ctttgcgttt ttcttttctt tttaatcttt ttagtcttcc ttttgcttta ttgagtctta
    19021 aaatttatga gttttttaca aatttatatt ataaaaaaca agccaaagcc aaactaagag
    19081 ccaatgaaaa tttaaaaatc atactcatta ccgcaagttt tggaaaaaca agtattaaaa
    19141 attttttata cgaactttta aaagatgact ttaaaagcta caaaacacca cgctctgtca
    19201 ataccttact aggtatagtt gctgatatca atgctaattt aagtcaagat actcaaattt
    19261 acatagctga agcaggcgct agacttaaag gcgatatcga tgaaatcacg cattttttac
    19321 aacctcaaat cagcatagta ggagagatag gcaatgcaca tttagagtat tttaaaagtg
    19381 ttgaaaatat ccgctcaacc aaacttgaag ccttaaattc cgaaagacta gaaaaggctt
    19441 ttttacactc tagcacccaa aaagaagaag ataaactcat cagcctttat gatgataaat
    19501 taagtcttat tcattcaagt cttgaaggtt tagaatttaa agtcgatata gaaaataaat
    19561 cctatgattt taaaagtcaa attttagggg attttaatgc gcaaaatctt tgtgtttgta
    19621 tactttgtgc tcattatctt ggcataaaac tagaaaaaat tcaaaagcaa gttttaaata
    19681 taaattccgt agaacatcgc ttgcaagtgc tttcaagaga gcctaaattt atcatagatg
    19741 atggttttaa tggaaatttt aaaggtatga gcacaagcta taaactttgt aaaagctata
    19801 aaggacgcaa agttttagta agtcctggta tagtagaagt aagcgaagaa gaaaatataa
    19861 aacttgccaa aatcatcaat gagtgttttg atcttgctat cattagtgca caaatcaatg
    19921 ctgaaatttt caaaaaagag ttaaaaataa aaaccattat acttaaagaa aagagtcaac
    19981 tagttcaaac tctagctaaa gaaacaaaac acggagattt gatactcttt tcaaacgatg
    20041 cacctagctt tatgtgattc gcataagtat ttgcaaatgt catcattttt aatttgactt
    20101 cgtgcaaata cttcctaaac cctagtttgc cccataagat tatttaatct atccattata
    20161 gatccaacat aagaattgat actttcactg cttgctttcc aaccattagc ttttacttga
    20221 ttaaattctc tatcaaacca agctccacca taacctatgc ttgtattttg ccaagcaacc
    20281 cctttatcca ttgcatatat atctgcatca agccaaccct cttgtgcata gccttttaac
    20341 aaacttgcaa aatcaacttt acctgtcata atgtcatcta aagaagctaa agagccatca
    20401 aagctttctt tagccatagc ttcagcataa gacttagcta taggatttaa tgttgcacta
    20461 ccttctcttg gcgatacacc cgttgatttt aaaaaactca taaacaaagc ttctttagaa
    20521 taacttccat cttcattttg tggataaact gacatatcag gattaaaagt atctattgca
    20581 gtgtctttat ctaaattttg agtttgcata ctttgcggag tgaaatttaa tggttgtaag
    20641 cctatattaa tatgtccaaa cattcctaat tgttctgctt cattatattg ctcttgtgta
    20701 ttataatagt ttgttattgt tagcttgtca taatttttcg gcataatacc tatagtttta
    20761 tcagatgata attcactaat tccc
//
LOCUS       DAPIVO010000030        20485 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.030, whole genome shotgun sequence.
ACCESSION   DAPIVO010000030 DAPIVO010000000
VERSION     DAPIVO010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20485
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.030"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            20..754
                     /gene="blaOXA"
                     /locus_tag="RJ239_000964"
     CDS             20..754
                     /gene="blaOXA"
                     /locus_tag="RJ239_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OXA-61 family class D beta-lactamase"
                     /protein_id="HDV7331092.1"
                     /translation="MFGQDKILNNWFKEYNTSGTFVFYDGKTWASNDFSRAMETFSPA
                     STFKIFNALIALDSGVIKTKKEIFYHYRGEKVFLSSWAQDMNLSSAIKYSNVLAFKEV
                     ARRIGIKTMQEYLNKLHYGNAKISKIDTFWLDNSLKISAKEQAILLFRLSQNSLPFSQ
                     EAMNSVKEMIYLKNMENLELFGKTGFNDEQKIAWIVGFVYLKDENKYKAFALNLDIDK
                     FEDLYKREKILEKYLDELVKKVKNDG"
     gene            complement(839..1723)
                     /locus_tag="RJ239_000965"
     CDS             complement(839..1723)
                     /locus_tag="RJ239_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HDV7331093.1"
                     /translation="MIRIDINHPMNTAKGRLDLNFKKDIESGKITALFGESGAGKTTL
                     LKIIAGLIKPKLGRIEVDNELWFDSSKNFSLALQKRKIGFVFQDYALFPNMNIKENIA
                     YAASSKAKVSELLALMKLENLAKIYPKHLSGGQAQRVALARALAREPKILLLDEPLSA
                     LDFKMRANLQDELTKILEYFKISTLLVSHDLAEIYKLSHRILELKNGKIIKDFPKNEF
                     FTHSNISAKLRLSATLLEIKKSDILVVLTLLLNQDIIKITLSEEEFLKAYQDVKIGDT
                     LLLSIKAFNPIIVGKLDK"
     gene            complement(1720..2394)
                     /gene="modB"
                     /locus_tag="RJ239_000966"
     CDS             complement(1720..2394)
                     /gene="modB"
                     /locus_tag="RJ239_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HDV7331094.1"
                     /translation="MLDPAFLQTLYLTFKLAFITTFILFFIGVFLAYLLSFVRFPFKT
                     ILQSFISLPLILPPSVLGFYLLVTFSANSFLGQVLKEYFNLSLVFSFEGLVFASLIFS
                     LPFMVNPLQSAFSSINPNLLDASYSLGKSKIYTLFRVILPNSKAGIFSACAMSFAHTV
                     GEFGVVMMIGGHKQGETLVASIAIYDELEILNYSLAHQYAFILFIFSFLVLFSLYFIN
                     KKMSFQ"
     gene            complement(2387..2788)
                     /locus_tag="RJ239_000967"
     CDS             complement(2387..2788)
                     /locus_tag="RJ239_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum-pterin-binding protein"
                     /protein_id="HDV7331095.1"
                     /translation="MNLIKGQICELLNQEDIVIVKILSKEVIFSVLMLELKSLENLKI
                     GVSVELLFKEHELCFSASKTLLSVENSFLAKITKIKKGKLLYQVFFDFKGNELSSIIT
                     KEKALELEICENQEWLCFVKANDIVLRSHSA"
     gene            complement(2785..3534)
                     /gene="modA"
                     /locus_tag="RJ239_000968"
     CDS             complement(2785..3534)
                     /gene="modA"
                     /locus_tag="RJ239_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV7331096.1"
                     /translation="MKKFVVFFGILLFVSCLNAQNLSIFVASSASKAMSEVKDEFLKT
                     HPEDKIELVFGASGKYYELLKQGREFDLFFSADTKYAKAIYDDKNALIKPKVYVLGVL
                     ALYSLDENLLQGGVENLKEKANKITHLSIANPKVAPYGVAAKEVLENLGLNELLKDKI
                     VLGENISVPVLHVDSKNSDIAIVAYSLVSSINHPKGKAVIIDAKYFSPLEQSYVITKY
                     AKDKKLAFEFNEFIGSSKAKEIFKKYGFSTP"
     gene            complement(3585..4271)
                     /gene="bioC"
                     /locus_tag="RJ239_000969"
     CDS             complement(3585..4271)
                     /gene="bioC"
                     /locus_tag="RJ239_000969"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HDV7331097.1"
                     /translation="MNFLKAKDYEKHAKVQDFMGLKLCEILKNLRISHFEKVFEFGCG
                     RGELSKKLQNFITFDEYLKNDILDFKENSSILIFDMNEIAKQDLSKEKFDLIVSNATL
                     QWLDLKRIIPSLRDMLNQNGILLLSTFAEQNLKEIKQSTGFGLNYFSLNELEQIFKVY
                     FNEVKITQELIKLSFDNALDVFRHLKLSGVNSLGFYPLNKGFLKEFEEKFQNKLTYHP
                     VFILCKNDIK"
     gene            complement(4268..4879)
                     /locus_tag="RJ239_000970"
     CDS             complement(4268..4879)
                     /locus_tag="RJ239_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HDV7331098.1"
                     /translation="MKYEFLCKNPDSKKLIVVFGGFASHSSHFSHLKSDKNVILFYDY
                     ENFDLNFDFKAFDELFLIAFSMGVCVANRLLKELNFKQKIAINGTNLGIDKSKGIHPA
                     IFRKTLQNFKLENFKEALFKERKNLTKDFIFKDEKALKIELEKLFDFALVKQEENLLW
                     DKVYSSKKDEIFPPNALKNAFSKLIFLNEPHFAFFHFKTWDEL"
     gene            complement(4876..6018)
                     /locus_tag="RJ239_000971"
     CDS             complement(4876..6018)
                     /locus_tag="RJ239_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase
                     family protein"
                     /protein_id="HDV7331099.1"
                     /translation="MKLEKILQDLEQNHNLRTLTPLKHENKFVYKQDHKLLNLVGNDY
                     LYLASSKELKAEFLNTLKEQDLFFSSSSSRSLSGNFEIYEKLESFLKTKFKDKEILHF
                     NSGYHLNISCIAALSSVSKTLFLTDKFIHASMIDGLRLGRADFFRFHHKDMNHLESLI
                     QKHYENYENIIVLSEALFSMDGDFSDFKTLCELKRRYDKIKLYIDEAHSVGCFDEEGL
                     GLVKKLALENEVDFLVFTFGKALASMGACIICDEKYKKFFINKARAFIYSTALPPINV
                     AWTQFIFKKMPYFKKEREKLELLSTFFKSKLQEKNHIVLGDAYIICLLLGENKKALEI
                     SQKLQKAGFFAPAIKEPTVPKNTARIRFSLHAGLNTEELERIIELL"
     gene            6086..7369
                     /locus_tag="RJ239_000972"
     CDS             6086..7369
                     /locus_tag="RJ239_000972"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HDV7331100.1"
                     /translation="MQNQILKNLDLKHIWHPCTQMKDHETLPLIPIKKAKGVWLYDFD
                     DKAYMDCVSSWWVNLFGHCNEKIANAIKKQVDELEHVILAGFTHEPIIKLSARLCEKV
                     GRNFNKCFYADNGSSAIEVALKMSFHYHLNKGVKKSKFLSLSNSYHGETLGALSVGDV
                     ALYKDTYKTLLLECLSTPVPQGKDYTKELEILKDILEKHSNEICAFILEPLVQCAGNM
                     HMYEARFIDEAIKLCHDFNVQVIFDEIAVGFGRTGTLFALHQCKQSPDFICLSKGITG
                     GFMPLSVVLTKDEIYNAFYAPYSEQKAFLHSHSYTGNTLACAAANVVLDIFENENILE
                     KNQILSTFIQQEFSKLKKFDFLGNFRTCGMISAFDILSHKHERVGLFVFQKALEKGLL
                     LRPLANTIYFMPPYIITKEQIVYVVESLEQIFKEF"
     gene            complement(7356..7961)
                     /gene="bioD"
                     /locus_tag="RJ239_000973"
     CDS             complement(7356..7961)
                     /gene="bioD"
                     /locus_tag="RJ239_000973"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HDV7331101.1"
                     /translation="MQIYVSGIHTDVGKTHFSAAFCANFNYDYFKLIQAGTPTDSEFI
                     AKFSPKTKVFKEGIFLQTPASPHLGKIKEKLDYKALDIILPKSENLLIELAGGLFSPM
                     DENYTMIDFVNIFKHPTILVAKYYLGSINHILLSIEALKQRNINLLALVMMGKKDTFQ
                     DDFIKNYAKIPIINLDFFDENSILNQDFKEQMQEILQLKIP"
     gene            complement(7971..8285)
                     /locus_tag="RJ239_000974"
     CDS             complement(7971..8285)
                     /locus_tag="RJ239_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDV7331102.1"
                     /translation="MEWFYLFLATACEIFGVVIMKELVSTKNKLYLLALIVCFGFSFT
                     FLSLSMQNIAMSVAYAIWTGAGTAGGVMIGVLFYKESKSFLKLFLITVIIACTVGLKF
                     LS"
     gene            complement(8288..8626)
                     /locus_tag="RJ239_000975"
     CDS             complement(8288..8626)
                     /locus_tag="RJ239_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDV7331103.1"
                     /translation="MNEKFNINIAWFLIILGGIIECFWVSGLKYSTEIWHYILTAIGV
                     CISFTCFLKACERLEVSITYSVFVGIGTIGVVLNEMFIFNEAVSIIKLVLIVILLLSI
                     IALKWISKEA"
     gene            8760..9296
                     /locus_tag="RJ239_000976"
     CDS             8760..9296
                     /locus_tag="RJ239_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HDV7331104.1"
                     /translation="MLEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNE
                     FIKEVRKKTTLIFDVKVGSQTLSVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPV
                     KITGTAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVPAG
                     VTMIDADRVAVVGVEKAR"
     gene            9293..9838
                     /locus_tag="RJ239_000977"
     CDS             9293..9838
                     /locus_tag="RJ239_000977"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDV7331105.1"
                     /translation="MILVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFTNLTNSKFK
                     GELFKIGSSLLLLKPSTYMNNSGLSVKAVNDFYKCERMIVIHDDIDINLGALRFKKGG
                     SSGGHNGLKSIDTLCGNDYERVRIGVGKGENVISHVLGKFKSEEEITLSKVLEHAKKA
                     LLELIENDDLSAISSKYSLKA"
     gene            9840..10898
                     /locus_tag="RJ239_000978"
     CDS             9840..10898
                     /locus_tag="RJ239_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HDV7331106.1"
                     /translation="MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAAN
                     LDLLYVMFLSFSAVPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFL
                     WALFFCCIYIGLNFTSFAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQ
                     NSAQNIKIFNINDLNLSSFASAKNAHFEGESWILRDGNITLLPKNYELANDGLKIQDF
                     SELKSLEGFKPKIIEGVASNSDYSISDALESFELFKAQNVNTDTLKINLYKFVFTPFF
                     APFLMLIMYYFFPVIARFFNLAFVTFIAFVVTLMIWGVLFLLTRLSENSVIASEIGIV
                     VPIIILGCLSAYMYYKHR"
     gene            10942..12150
                     /gene="lysA"
                     /locus_tag="RJ239_000979"
     CDS             10942..12150
                     /gene="lysA"
                     /locus_tag="RJ239_000979"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HDV7331107.1"
                     /translation="MDYKQLKQEFNTPFYIYNFDFIKERFLNLKEAFKARKSQIFYAV
                     KANSNLSLLQMLANLDSGFDCVSIGEVKRALKAGAKAYKIIFSGVGKTKEELRQALEY
                     DILYINLESEAEMMLLESVAKELNLKARISIRVNPNVDAKTHPYISTGLNENKFGVEI
                     DIARKMYLYAKNSSFLEPVGVHFHIGSQLLDISPIHEAAAIVAKLVRELKALQIDLKF
                     FDIGGGLGVAYEKNECEPDLYDYAQGILAQLHGLDLTIGMEPGRYLVAKSGEFVCSVL
                     YEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILPYNQGEESLCDVVGGICESGDFFA
                     KARSLPSTQSDDIMVIKNTGAYGFSMSSNYNTRNKVCELALEEGQVRLIRQRENFEDQ
                     IALEEKFLKA"
     gene            12152..12919
                     /locus_tag="RJ239_000980"
     CDS             12152..12919
                     /locus_tag="RJ239_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIA family hydrolase"
                     /protein_id="HDV7331108.1"
                     /translation="MFFLDVQGTLISDHDKSLIHGAKELIDFLNAKNLPYLIITNNTK
                     KLDFLEKLQQKGLVIKENAYIDPFSVLKHLLRPCKVAAFGADEFVKSLENLGFELDFV
                     NPSAVLVASYDDFKFKDFATMIELARREVRFIAMHETSIYKKDGRPYPGVGSIMAMLK
                     NAIDFEYEVVGKPSIAFYKEALNLIRRQNSKIDFEDIKIISDDFRGDLLKAKELGMKT
                     LLVLSGKISDTKGLDTDLLDGVYPSVFEFLKDLKCQI"
     gene            12907..13980
                     /gene="pheA"
                     /locus_tag="RJ239_000981"
     CDS             12907..13980
                     /gene="pheA"
                     /locus_tag="RJ239_000981"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HDV7331109.1"
                     /translation="MPNLEEFRNKIDAVDDKILDLLNERMTYVKSIGELKQSSGGSIY
                     RPERERAIINRLKNANLGLLDQNAIEAIYQEIFAVSRNLEMPQTIAYLGPEGTYTHQA
                     ARSRFGAMSRYIALANIEDVFKELSNKEAKYGVVPIENNTEGAVGITLDCLGKYNELK
                     IFGEIYMDIHHSFVGINENLKEIKRIYSHPQGYNQCRKFLESHELSAIEFVPSKSTAN
                     AAYLASQDKYAAAICSRIAAKLYNVPVLFDKIEDNAANKTRFLILSDIKNPKMPNCKT
                     SILAHTAHKPGGLSFLLEQFKKENINLTKLESRPVKSKEFLHSFYIDFEGHIDDENVK
                     KALKDIQEIVWLGSYLSGEKDEI"
     gene            13970..15064
                     /locus_tag="RJ239_000982"
     CDS             13970..15064
                     /locus_tag="RJ239_000982"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDV7331110.1"
                     /translation="MKFNEFLNNLSNYEPGKDIEVIAKEYGVKEVIKLASNENPFGTP
                     PKAIECLRQNANKAHLYPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKL
                     NSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCL
                     PNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNV
                     LYLGTFSKLYGLGGLRIGYGIANANIISAFYKLRAPFNVSNLALKAAVAAMDDDEFTE
                     KTLENNFSQMELYKEFAKKHNIKIIDSYTNFITYFFDEKNSTDLSEKLLKKGIIIRNL
                     KSYGLNAIRITIGTSYENEKFFTEFDKILR"
     gene            15116..16798
                     /gene="fliF"
                     /locus_tag="RJ239_000983"
     CDS             15116..16798
                     /gene="fliF"
                     /locus_tag="RJ239_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="HDV7331111.1"
                     /translation="MDFKNMLHQIGQLYQNLTRKQRIVIAASIIVVVGFLVFLALFHG
                     SGSNANNGYAVLVENVSPSSSAAIVAKLEQNNIPYKLESENKILVPQDQVYRQRMFIA
                     SEGLIKDSRVGFEAFDTQAFGATNEEQKVKYQRAIEGELARTIETLEPIRSAVVHIAF
                     PKDSVFTERQIPPTASVVVNVREGLKLTRKQIDGIKNIVSAAVPKLTKENVKISDQSG
                     VPLDEQEAYEDDLVRAQIKFKSDQEKALEDKIIENLAPFAGGMDKVKVSVNIDFDFSK
                     QESQSEIYDPNPIVRSEQTLNEERTGRKDPEIQGVPGAVSNIGPVEGLDNKGQIDTYK
                     KNQVTTNNELSKTITNTKKQFATVLRTSAAVTIDGKYQDVVDENGDVKSEYVPLTKEE
                     LASVESIVKNTINFSATRGDSVVVQNLPFHRESIRVESKVKTFYNRFVEPFIPPVKYF
                     IAAILLFIFYKKVIAPFTQKMLEDVAAQEEMQQGPNAVLDDAEDALEKFNAARKKVEE
                     QLGFGDNFNEDSIQYEVLLEKLRGLVSDKGEEIAALLQNLIQNDSEFGEKDM"
     gene            16798..17826
                     /gene="fliG"
                     /locus_tag="RJ239_000984"
     CDS             16798..17826
                     /gene="fliG"
                     /locus_tag="RJ239_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HDV7331112.1"
                     /translation="MIKLSEEQKMVYDDLSMPEKVAIFLIQLGEDATTSVFSHMEIDV
                     ITEISRYIAMAKNVDRSVATAVLEEFYTLLQSNQYIKSGGLEYAKEILFRTFGPEIAN
                     KILEKLTKSMENNQNFAYLAQIKPQQLADFITKEHPQTIALILAHMDSIHAAETLEYF
                     SDELRAEVVIRMANLGDISPSIIKRVSAVLESKLESLTSYKVEVGGPRAVAEVLNRLG
                     QKASKSTITYIEQSDERLAETIKELMFTFDDIQKLSTQAIREILKVADKRDLMIGLKG
                     ASEELKQKFLANMSTRASEAFLEEMGFLGAVRVKDVEDAQRKVVEVVQKLAEQGLVQT
                     GDADEMIE"
     gene            17834..18664
                     /gene="fliH"
                     /locus_tag="RJ239_000985"
     CDS             17834..18664
                     /gene="fliH"
                     /locus_tag="RJ239_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HDV7331113.1"
                     /translation="MVNRSNVISGGASDQHVVEGYRFKVISEFDNHTGEKKHTQTPDE
                     ENTNISLNDEKPVEENQVIASTQAVMETQIPTFQPSFVEDLLKKTDEMSSNIIKLQMQ
                     IESQENEFNNRLNSELENAKEKFTKEGYEKAKEEFQKELSDFKDKYLKSIAKLDNACE
                     NLENFIEKNEKELADTAIDIAKEVILKELELNSSKIAYALAKDLIGELKGASAIELKV
                     NAEDYEYLKEQFDQNAHIKISLDDAISKGSVVIISDAGNIESNLNSRLTKIKKMVNNE
                     "
     gene            18657..>20485
                     /locus_tag="RJ239_000986"
     CDS             18657..>20485
                     /locus_tag="RJ239_000986"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HDV7331114.1"
                     /translation="MSKKFAHTQEELEKLSLKELENLAASMREKIIQVVSKNGGHLSS
                     NLGAVELSIAMHLVFDAKKDPFIFDVSHQSYTHKLLSGKEEIFDTLRQINGLSGYTKP
                     SEGDYFVAGHSSTSISLAVGACKAIALKGEKRIPVALIGDGALSAGMAYEALNELGDS
                     KFPCVILLNDNEMSISKPIGAISKYLSQAMATQFYQSFKKRIAKMLDILPDSATYMAK
                     RFEESFKLITPGLLFEELGLEYIGPIDGHNLGEIISALKQAKAMQKPCVIHAQTIKGK
                     GYALAEGKHAKWHGVGAFDIDSGESVKKSDTKKSATEIFSKNLLDLASKYENIVGVTA
                     AMPSGTGLDKLIEKYPNRFWDVAIAEQHAVTSMAAMAKEGFKPFIAIYSTFLQRAYDQ
                     VIHDCAIMNLNVVFAMDRAGIVGEDGETHQGVFDLSFLAPLPNFTLLAPRDEQMMQNI
                     MEYAYLHQGPIALRYPRGSFILDKEFNPCEIKLGKAQWLVKNNSEIAFLGYGQGVAKA
                     WQVLRALQEMNNNANLIDLIFAKPLDEELLCELAKKSKIWFIFSENVKIGGIESLINN
                     FLQKYDLHVKVVSFEYEDKFIEHGKTSEVEKNLEKDVNSLLTKV"
BASE COUNT         7341 a         2815 c         3464 g         6865 t
ORIGIN      
        1 tttacttttc ttaaatttag tgtttgggca agataagata ttaaataatt ggtttaaaga
       61 gtataataca agcggcactt ttgtttttta tgatggaaaa acttgggcga gtaacgactt
      121 ttcaagggct atggagactt tctctcccgc ttccactttt aaaattttta atgctctaat
      181 tgcacttgat agtggtgtga taaaaactaa aaaagaaatt ttttatcact atagaggtga
      241 aaaagtattt ttatcttctt gggcgcaaga tatgaattta agttcagcta taaaatattc
      301 taatgttctt gcttttaaag aagtggcaag aagaattggt atcaaaacta tgcaagaata
      361 tttaaacaag cttcattatg gtaatgctaa aatttccaag atcgatactt tttggcttga
      421 caactcacta aaaataagcg ctaaagaaca agcaattttg ctttttagac tttcacaaaa
      481 tagcttacct ttttctcaag aagcaatgaa tagtgttaag gaaatgattt atttaaaaaa
      541 tatggaaaat ttagagcttt ttggaaaaac aggttttaat gatgagcaaa aaattgcttg
      601 gattgtaggt tttgtgtatt taaaagatga aaataaatat aaggctttcg cgctaaattt
      661 agatattgat aaatttgaag atttatataa aagagaaaaa attttagaaa aatatttaga
      721 tgaacttgta aaaaaagtta aaaatgatgg ctagtgagta tttcgtaaaa tgcaaaaata
      781 cttaattgta tgatttgcgt acacttaaag tactcattaa aaaattaaat ttttgctctt
      841 atttatcaag ttttcctacg atgatagggt taaaggcttt tatggatagc aaaagcgtat
      901 cgccgatttt tacatcttga taagctttta gaaattcctc ttcactaaga gtgattttaa
      961 taatatcttg atttaaaagc aaggttaaaa ccactaaaat atcacttttt ttaatttcta
     1021 gcaaagttgc acttaagcgt aattttgcgc tgatatttga atgagtaaaa aattcatttt
     1081 taggaaaatc tttaataatt tttccgtttt taagctctaa aattctatga cttaacttat
     1141 aaatttcagc tagatcatga cttaccaata aagtacttat tttaaaatac tctaaaatct
     1201 tggttaattc atcttgtaaa ttggcacgca ttttaaaatc caaagcactc aaaggttcat
     1261 ctaaaagcaa gatttttggt tctcttgcta aagctcttgc taaagctact ctttgtgcct
     1321 gccccccact taaatgttta ggataaattt tagctaaatt ttcaagcttc attaaggcta
     1381 aaagctcgct aacctttgct ttagaactag cggcataggc gatgttttct tttatattca
     1441 tatttggaaa aagcgcataa tcttgaaaaa caaaaccaat ttttcttttt tgtaaagcta
     1501 aactaaaatt ttttgaagaa tcaaaccaaa gttcattatc tacttctata cgccccaatt
     1561 taggctttat aagtcccgct atgattttta aaagagtggt ttttcctgct ccactttcgc
     1621 caaaaagtgc agtaattttt cctgattcta tatctttttt aaaatttaaa tccagtcttc
     1681 ctttagcggt attcatagga tgattgatat caattcttat cattgaaaac tcattttttt
     1741 attgataaaa taaagactaa aaagtactaa aaaagaaaaa ataaacaata taaaagcata
     1801 ttgatgggct aagctatagt ttaagatttc aagttcatca taaatagcta tactagccac
     1861 taaagtttca ccttgtttat gtcctcctat catcatcacg actccaaatt cacccacagt
     1921 atgggcaaaa ctcatcgcac aagcactaaa aattcctgct ttagaattag gtaaaatcac
     1981 tctaaaaaga gtataaattt tacttttacc taaactataa gaagcatcga gcaaatttgg
     2041 attgatcgat gaaaaggcac tttgcaaagg atttaccata aaaggcaaag aaaaaatcaa
     2101 agaagcaaaa acaagacctt caaaactaaa aaccaaagaa agattaaaat attcttttaa
     2161 aacttgccct aaaaaactat tagccgaaaa agttacaagc aaataaaatc ccaaaacact
     2221 aggaggtaaa atcaaaggca aggaaataaa gctttgaagg attgttttaa aaggaaaacg
     2281 cacaaaactt aacaaataag ctaaaaaaac accgataaaa aaaaggataa aagtcgtgat
     2341 aaaagcaagt ttaaaagtaa gataaagggt ttgtaaaaaa gctggatcaa gcactatgac
     2401 tccttaatac aatatcattt gcttttacaa aacaaagcca ttcttgattt tcacaaattt
     2461 caagttctaa agctttttct ttggtgataa tactagaaag ttcattacct ttaaaatcaa
     2521 aaaatacctg atataaaagt ttgccttttt taatttttgt aattttagct aaaaaagaat
     2581 tttcaacact taaaagagtt ttgcttgcgc taaaacaaag ctcatgctct ttaaaaagaa
     2641 gttctacact cacaccaatt tttaaatttt ctaaagattt taattcaagc attaaaacac
     2701 taaaaatcac ttctttagaa agtattttaa caataactat atcctcttga tttaaaagct
     2761 cacaaatttg tccttttata aggttcatgg tgtgctaaat ccgtattttt taaaaatttc
     2821 ttttgctttt gaagagccaa taaattcgtt aaattcaaag gctaattttt tatccttagc
     2881 gtattttgtg atgacataac tttgctctaa agggctaaaa tactttgcat caattataac
     2941 agccttaccc ttaggatgat tgatagaaga aactaaagaa taagccacta tagctatatc
     3001 tgaatttttg ctatctacat gtaaaacagg cactgagata ttttcgccta aaacgatttt
     3061 atccttaaga agctcattta aacccaaatt ttcaagcact tctttagctg ctactccata
     3121 aggagctact ttaggattgg ctatgcttag atgcgtgatt ttgtttgcct tttcttttaa
     3181 attttcaacg cctccttgga gtaaattttc atccaagcta tacaaagcca aaactcccaa
     3241 aacataaact tttggtttta ttaaagcatt tttatcatca taaatagcct tagcatattt
     3301 agtatccgct gaaaaaaaga gatcaaattc tcttccttgt tttaaaagct cataatattt
     3361 tccagaagca ccaaaaacca attctatttt atcttctgga tgtgttttca aaaactcatc
     3421 tttaacttca ctcatcgcct ttgaagctga agaagctaca aaaatactta aattttgcgc
     3481 atttaaacac gaaacaaaaa gcaaaatccc aaaaaatact acaaactttt tcatttagtt
     3541 ttccttgtgt aaaaatttaa tttttggatt ataacacaaa aaattcattt tatatcattt
     3601 ttgcataaaa taaatacagg atgataagtg agtttgtttt gaaatttttc ttcaaattct
     3661 tttaaaaaac ctttatttaa aggataaaat cctaaagaat ttactccgct taattttaaa
     3721 tgtctaaaaa catctaaagc attatcaaag cttaatttta tgagttcttg agtaattttt
     3781 acttcattaa aatagacttt aaaaatttgc tctaattcat ttaagctaaa ataatttaaa
     3841 ccaaaacccg tgctttgctt gatttctttt aaattttgct ctgcaaaagt agaaagaagt
     3901 aaaatcccat tttgatttag catatctcta agacttggta taatgcgttt taaatcaagc
     3961 cattgcaaag ttgcatttga aacaataaga tcaaatttct ctttacttaa atcctgtttt
     4021 gcaatttcgt tcatatcaaa aattaaaata ctagaatttt ctttaaaatc taaaatatcg
     4081 ttttttaaat actcatcaaa agtaataaaa ttttgaagtt ttttgctcaa ttcacccctg
     4141 ccacaaccaa attcaaatac tttttcaaaa tgtgaaattc ttaaattttt taaaatttca
     4201 caaagtttta aacccataaa atcttgcact tttgcatgtt tttcataatc ttttgctttt
     4261 aaaaaattca aagctcatcc caagttttaa aatgaaaaaa agcaaaatgc ggttcattta
     4321 aaaaaataag ttttgaaaaa gcatttttta aagcatttgg tggaaaaatt tcatcttttt
     4381 tacttgaata aaccttatcc caaagcaaat tttcttcttg ttttactaaa gcaaagtcaa
     4441 aaagtttttc aagctctatt tttaaagctt tttcatcttt aaaaataaaa tctttagtta
     4501 aatttttgcg ttctttaaat aaagcttctt tgaaattttc taatttgaaa ttttgcaagg
     4561 tttttctaaa aattgcagga tgaattcctt ttgatttatc tatgcctaaa tttgtgccat
     4621 ttatggctat tttttgttta aaattaagct cttttaaaag tctatttgcc acacaaaccc
     4681 ccatagaaaa agcgattaaa aaaagttcat caaaagcttt gaaatcaaaa tttaaatcaa
     4741 aattttcata atcataaaat aaaatcacat ttttatcgct ttttaaatgc gaaaaatgac
     4801 tagaatgtga agcaaatccc ccaaatacca ctataagttt ttttgaatca ggatttttac
     4861 ataaaaattc atatttcata aaagctctat tatcctttca agttcttctg tgttaagtcc
     4921 tgcgtgcaaa gaaaaacgaa ttctggctgt attttttggc acggtaggtt ctttgatcgc
     4981 aggagcaaaa aaaccagctt tttgaagttt ttgtgaaatt tctaaggctt ttttattttc
     5041 acctaaaagc aagcaaataa tataagcatc gcctaaaacg atgtgatttt tttcttgcaa
     5101 tttactttta aaaaaagtgc ttaaaagctc taatttttct ctttctttct taaaataagg
     5161 cattttttta aaaataaatt gcgtccaagc tacattaata ggtggcaagg ctgtagaata
     5221 aataaaagct ctagccttgt tgatgaaaaa tttcttatat ttttcatcac atattataca
     5281 agcacccatg gaagcaaggg cttttccaaa ggtaaaaacc aaaaaatcca cttcattttc
     5341 taaggctagt tttttaacaa gccccaaacc ctcttcatca aaacaaccca cgctgtgtgc
     5401 ttcatctata taaagcttaa ttttatcata acgcctttta agctcacaca gagttttaaa
     5461 atcgctaaaa tctccatcca tactaaacaa agcttcgctt aaaacgatga tattttcata
     5521 attttcataa tgtttttgga ttaaactctc taaatgattc atatctttat gatgaaaacg
     5581 aaaaaaatca gccctgccaa gtcttaagcc atcaatcata cttgcatgaa taaatttatc
     5641 ggttagaaaa agcgtcttag aaacgctaga aagtgctgct atacaagaga tatttagatg
     5701 atagccacta ttaaaatgta aaatttcctt atctttaaat ttagtcttta aaaaactttc
     5761 taatttttca taaatttcaa aatttccact caaacttctt gaactcgaac ttgaaaaaaa
     5821 caaatcttgt tcttttaggg tgtttaaaaa ctcagctttt aactctttgg aagacgccaa
     5881 ataaagataa tcatttccta ctaaatttaa aagtttgtga tcttgcttat aaacaaattt
     5941 attttcatgt tttaaaggtg ttagagttct tagattgtga ttttgctcta gatcttgcaa
     6001 aattttttca agcttcattt ttttcctgta aatttaaaaa tttaaagtat tattttgcca
     6061 aaatattttt aaaaaagaag ttataatgca aaatcaaatc ttaaaaaatc tcgatttaaa
     6121 acacatttgg cacccttgca cacaaatgaa agatcacgaa accctacctt taattcctat
     6181 aaaaaaagca aaaggtgtat ggctttatga ttttgatgat aaagcttata tggattgtgt
     6241 gagttcttgg tgggtcaatc tttttggtca ttgtaatgaa aaaatcgcaa atgccattaa
     6301 aaaacaagtt gatgagctag agcatgtgat cttagcaggc tttacacatg agcccattat
     6361 caagctttct gcaagacttt gcgaaaaagt aggcaggaat tttaacaaat gtttttatgc
     6421 agataatgga tcaagtgcta ttgaagtagc acttaaaatg agttttcatt atcatttaaa
     6481 taagggagtg aaaaaaagta aatttttatc tttaagcaat tcctatcatg gcgaaacctt
     6541 aggggcttta agtgtgggcg atgttgcact ttataaagat acttacaaaa ccttgctttt
     6601 agagtgttta agcactcctg tgccacaagg taaagactat actaaagagc ttgaaatttt
     6661 aaaagatatt ttagaaaaac actcgaatga aatttgcgct tttatacttg aacccttggt
     6721 gcaatgtgcg ggaaatatgc acatgtatga agcaaggttt attgatgaag cgatcaagct
     6781 ttgccatgat tttaatgtgc aagtgatttt tgatgaaatt gcagtgggct ttggacgcac
     6841 aggcactttg tttgccttgc atcaatgcaa acaaagcccc gattttatct gtctttcaaa
     6901 ggggattaca ggaggattta tgcctctttc tgtagtgctt acaaaggatg aaatttataa
     6961 tgccttttat gcaccctata gcgaacaaaa agccttttta cactctcata gttatacagg
     7021 aaacactcta gcttgtgcag cagctaatgt ggttttagat atctttgaaa atgaaaatat
     7081 tttagaaaaa aatcaaattt taagcacctt tatccagcaa gaattttcaa aacttaaaaa
     7141 atttgatttt ttaggaaatt ttagaacttg tggaatgatc agtgcttttg atattttaag
     7201 ccataaacac gaacgcgtgg gactttttgt atttcaaaaa gccttagaaa aaggtttgct
     7261 tttaagacct ttagcaaata cgatttattt tatgcctcct tacatcatca caaaagaaca
     7321 aatcgtttat gtagtagaga gtttagaaca aatttttaag gaattttaag ttgcaaaatt
     7381 tcttgcattt gctctttaaa atcttgattt aaaatgctat tttcatcaaa aaaatcaaga
     7441 ttaattatgg gaatttttgc ataatttttt ataaaatcat cttgaaaggt atcttttttg
     7501 cccatcatca caagggctaa aagattgata tttctttgct ttaaagcttc aatgctaagc
     7561 aagatatgat taatgcttcc aagatagtat tttgctacta aaatcgtagg gtgtttaaaa
     7621 atattcacaa aatcaatcat agtgtaattt tcatccatag gagaaaaaag cccacccgca
     7681 agctcaataa gtaggttctc actttttggt aaaatgatat ctaaggcttt ataatcaagc
     7741 ttttctttga tttttccaag atgaggggaa gctggagttt gcaaaaaaat accttcttta
     7801 aaaacctttg tttttgggct aaattttgca ataaactcac tatctgttgg agttcctgct
     7861 tgaatgagtt taaaataatc atagttaaaa ttcgcgcaaa aagctgcact aaaatgtgtt
     7921 tttcctacat cagtatgtat tccactcaca taaatttgca caaaaaatcc ttaagaaaga
     7981 aattttaaac ctactgtaca agcaataatc acagtgatta aaaaaagttt taaaaaactt
     8041 ttactttctt tataaaaaag tactcctatc attaccccac cagcagttcc agctcctgtc
     8101 catatagcat aagcaacact catagcgata ttttgcatac ttaaacttaa aaaagtaaaa
     8161 gaaaatccaa aacacactat caaagccaaa aggtaaagct tatttttagt gcttacaagt
     8221 tctttcatga tcaccacgcc aaaaatttca caagcagtag ctaaaaacaa ataaaaccat
     8281 tccatattta agcttccttg cttatccatt taagggctat aatgcttaaa agtaaaatca
     8341 ctataagcac aagtttaatt atagaaacag cctcgttaaa aataaacatt tcatttaaaa
     8401 ccaccccaat agtgccaatg cctacaaaaa cactataagt aatacttact tcaagtcttt
     8461 cacaagcttt taaaaagcaa gtaaaagaaa tacaaacccc aatggctgtt aaaatatagt
     8521 gccaaatttc tgtagaatac ttaagtccac tgacccaaaa acattctata atcccgccta
     8581 agattattaa aaaccaagct atattaatat tgaatttttc attcacatga agccttaaat
     8641 taacataata tttgtaaaac aaattatatc ttaaagaaat taaaagaagc tataaattta
     8701 cttttccata agccaaaatt agatataatc aaagctcatt ttttaagaaa ggataaaaga
     8761 tgttagaagg tatcgttaga gagagtatcg gtagaaaagc tgctaaagct ttaaaaagag
     8821 atggttatct aattgcaaac atctatggaa aaggattaga aaacatcaat gccgctttta
     8881 aagtaaatga gtttattaag gaagttcgta aaaaaactac tttaattttt gatgtaaaag
     8941 taggttctca aactttaagc gttgtagttg tggattatca aaaagatcct gtaactgcag
     9001 aacttaaaca tgtggattta aaagttgcgc aaaaaggtgt gatttctaaa tacatggttc
     9061 cagttaaaat cacaggaaca gctataggtc ttaaaaataa aggtgtttta attcaatcaa
     9121 aaagaagatt aaaagtaaaa tgtgcagctg aaaatttacc aaatttcttc gaacttgatg
     9181 taagtaaact tgatgtgggt gatgctttac ttgttcgtga tattgtagtt cctgcgggag
     9241 taactatgat tgatgctgat agagtagcgg ttgtaggtgt agaaaaagct agatgatttt
     9301 agtcgtaggg cttggcaata taggcgtaga gtatgaaaat acccgtcata atgtcggttt
     9361 tatgctaatt gacttacttt taaaagaaag caattttaca aatcttacaa actctaaatt
     9421 taaaggagag ctttttaaaa taggttcttc tttacttctt cttaaaccta gtacttatat
     9481 gaataattca ggacttagcg taaaagcagt gaatgatttt tataaatgcg aaagaatgat
     9541 agttatccat gatgatatag atataaattt aggagccttg cgctttaaaa aaggcggttc
     9601 aagtggtgga cataatgggc ttaaaagcat agatacttta tgtggaaatg actatgaaag
     9661 agtgcgtata ggagtgggaa agggtgaaaa tgtgatttcc catgttttag gtaaatttaa
     9721 atccgaagaa gaaataactt taagcaaagt tttagagcat gcaaaaaaag ctttgcttga
     9781 gcttattgaa aatgatgatt tgtctgctat atcatccaaa tacagcctaa aggcttaaga
     9841 tgtggatatt ttttcgtttt atttcaggga tttatttaaa aaattttttt attatatttt
     9901 tttctttact tggtttttat tgcggtattg atttgctctt aaattttaaa gatctaccaa
     9961 aagccgcaaa tcttgatttg ctttatgtta tgtttttatc tttttcggca gtgccttatg
    10021 tattacccat ttctttgatt tttgctttgg tagtttcttt gatttctatg atcagagcaa
    10081 atgaatttgt aagtctttat gcgttaggac tgagtagaaa ttatgttatt ttatttcctt
    10141 ttttatgggc tttatttttt tgttgtattt atataggatt gaattttact tcttttgctt
    10201 atgcaaatga ttataagaga aatattttga aaaatggcac tattatgaat caaagtggag
    10261 aagtgttttt gaaatttaac aataattttg tttatatttc aaagataaac aatggacaaa
    10321 atagtgctca aaatataaaa atttttaata ttaatgattt aaatttaagc tcttttgcaa
    10381 gtgctaaaaa tgcccatttt gaaggtgaaa gctggatttt gcgagatggt aatattacat
    10441 tattacctaa aaattatgaa cttgctaatg atggtttaaa gatacaagat ttctccgagc
    10501 ttaaatcact tgagggtttt aaaccaaaga ttatagaagg ggttgctagt aatagtgatt
    10561 attcaatatc tgacgcactt gaaagttttg agctttttaa ggcgcaaaat gtcaatacag
    10621 atactcttaa aatcaatctt tataaatttg tttttactcc tttttttgca ccatttttaa
    10681 tgcttattat gtattatttt tttcctgtaa tagcaagatt ttttaatctt gcttttgtaa
    10741 cttttatagc ttttgtagtg actttgatga tttggggagt cttgtttttg cttactagat
    10801 taagcgaaaa tagtgtgatt gcaagtgaaa ttggcattgt agtgcctatt ataattttgg
    10861 gttgtttaag tgcttatatg tattataagc atcgataaat taagctttgt gtagtaaaat
    10921 tataaaaatt aaaggttaaa tatggattat aaacaattaa agcaagaatt taatactcct
    10981 ttttatattt acaattttga tttcataaaa gagcgttttt taaatctcaa agaggctttt
    11041 aaggcaagaa aatctcaaat tttttacgct gtaaaagcca attcaaattt aagtttgttg
    11101 caaatgcttg caaatttaga tagtggattt gattgtgtaa gtataggcga ggtaaagcgt
    11161 gccttaaaag caggagcaaa agcttataag attattttta gtggagtagg aaaaaccaaa
    11221 gaagagttaa gacaagcttt agaatatgat attttatata ttaaccttga aagcgaagct
    11281 gaaatgatgc ttttagaaag tgtggctaaa gaacttaatc taaaggcaag aatcagtatt
    11341 cgtgttaatc caaatgttga tgcaaaaact catccttata tttctacagg attaaatgaa
    11401 aataaatttg gtgttgaaat tgatatagca agaaaaatgt atctttatgc aaaaaattca
    11461 tcttttttag agcctgttgg agtgcatttt catataggtt cgcaactttt agatatttct
    11521 cccattcatg aagcagcagc cattgttgca aaacttgtaa gagagttaaa agccttgcaa
    11581 atcgatctta aattttttga tataggcggt ggtttgggtg tggcttatga aaaaaatgag
    11641 tgcgaacctg atctttatga ttatgcacaa ggtatattag cacaacttca tgggcttgat
    11701 ttaactatag gaatggagcc tggaaggtat ctagttgcta aaagtggaga atttgtttgt
    11761 tcagtgcttt atgaaaaaca aaataaaacc aagcgttttg ttgtagtaga tggagcgatg
    11821 aatgatctta tacgcccaag tttatacgag gcttatcatg aaataatctt accttataat
    11881 caaggcgaag agagtttatg tgatgttgta ggtggaattt gtgagagtgg ggactttttt
    11941 gctaaagcaa ggtctttgcc tagcactcaa agtgatgata taatggttat taaaaatact
    12001 ggagcttatg gttttagcat gagtagtaat tacaatactc gtaataaagt ttgcgaatta
    12061 gcccttgaag aaggacaggt aagattgatc cgtcaaagag aaaattttga agatcaaatc
    12121 gctttagaag agaaattttt aaaggcttaa aatgtttttt ttagatgttc aagggacttt
    12181 aatttctgat catgataaat ctttaatcca tggtgctaaa gaactgatcg attttttaaa
    12241 tgcaaaaaat cttccttatc ttatcatcac taacaataca aaaaaacttg attttttaga
    12301 aaaattacag caaaaaggat tggttataaa agaaaatgct tatattgatc ctttcagcgt
    12361 tttaaaacac cttttaagac cttgtaaagt tgcggctttt ggtgcagatg agtttgtaaa
    12421 aagtcttgaa aatcttggtt ttgagctcga ttttgtaaat cctagtgctg tgcttgtggc
    12481 tagttatgat gattttaaat ttaaagattt tgccactatg atagaattgg ctagaagaga
    12541 agttagattt atagctatgc acgaaactag tatttataaa aaagatggta ggccttatcc
    12601 tggtgtaggt agcattatgg ctatgcttaa aaatgctatt gattttgaat acgaggttgt
    12661 gggtaagcct agcattgctt tttataaaga agctttaaat ttaataagaa gacaaaattc
    12721 aaaaattgat tttgaagata ttaaaatcat tagtgatgat tttaggggtg acttgcttaa
    12781 ggcaaaagaa cttggcatga aaaccttgct agttttaagc ggcaagataa gcgacacaaa
    12841 agggcttgat acggatttgc ttgatggagt ttatcctagt gtttttgagt ttttaaagga
    12901 tctaaaatgc caaatttaga agaatttaga aataaaatcg atgcggttga tgataaaatt
    12961 ttagatcttt taaatgaaag aatgacttat gttaaaagta taggtgagct taagcaaagt
    13021 agtgggggaa gtatttatcg tcctgagcgt gaaagagcca ttatcaatcg tttaaaaaat
    13081 gcaaatttag gacttttaga tcaaaatgcc atagaggcaa tttatcaaga aatttttgca
    13141 gtttcaagaa atttagaaat gcctcaaact atagcttatt tagggcctga aggaacttat
    13201 acacatcaag cagcaagaag tcgttttggt gcgatgagtc gttatatagc cttggctaat
    13261 atcgaagatg tttttaaaga gttaagcaac aaagaagcaa aatatggtgt tgtacctata
    13321 gaaaataata ccgaaggtgc agtgggcatt actttagatt gtctaggtaa gtataatgag
    13381 cttaaaattt ttggcgaaat ttatatggat attcatcatt cttttgtagg aattaatgaa
    13441 aatttaaaag aaatcaaacg catttattcg catccgcaag gttataatca atgtcgtaaa
    13501 tttttagaaa gtcatgaact tagtgctata gaatttgttc cttcaaaatc tacagctaat
    13561 gcagcttacc tagcttcgca agataaatat gcggcagcaa tttgttctag aatagcggct
    13621 aagctttata atgtgcctgt actttttgat aaaatagaag ataatgcagc caataaaaca
    13681 agatttttaa ttttaagcga tattaaaaat cctaaaatgc caaattgtaa aacttctatt
    13741 ttagcacaca cagcacataa acctggggga cttagctttt tattagagca gtttaaaaaa
    13801 gaaaatatca atcttactaa gcttgaatct cgccctgtaa aatcaaaaga atttttacac
    13861 agtttttata tagattttga agggcatatt gatgatgaaa atgtaaaaaa agccttaaaa
    13921 gatatacaag agattgtttg gcttggatct tatttatcag gagaaaaaga tgaaatttaa
    13981 tgaattttta aataatttaa gcaattatga acccggcaaa gatatagaag ttattgctaa
    14041 agaatatggc gttaaagaag tgataaaatt agcaagcaat gaaaatcctt ttggcacgcc
    14101 accaaaagct atagaatgtt taagacaaaa tgcaaacaaa gcccatcttt accctgatga
    14161 tagtatgata gaacttaaaa gcacattggc tcaaaaatac aaagttcaaa atgaaaatat
    14221 cattatcggt gcaggcagtg atcaagtgat tgaatttgct atacattcta agttaaattc
    14281 taaaaatgct tttttgcaag ctggagttac ttttgctatg tatgaaattt atgccaaaca
    14341 atgtggtgca aagtgttata aaactcaaag tattactcat aatttagatg agtttaaaaa
    14401 actttatgaa acgcacaaag atgaaattaa acttattttt ttatgcttac caaacaatcc
    14461 tttaggcgag tgtttggatg caagtgaggc gaccgagttt attaaaggtg taaatgagga
    14521 ttgtttagtt gtgattgatg cagcttataa tgaatttgca agttttaaag atagcaaaaa
    14581 acatttagaa ccttgtgaat tgattaaaga atttgacaat gtgctttatt tgggaacttt
    14641 ttctaaactt tatggattag gaggcttacg cattggttat ggcatagcta atgctaatat
    14701 tattagtgca ttttacaagc ttcgtgctcc ttttaatgtg agcaatcttg ctttaaaagc
    14761 agcagttgca gcaatggatg atgatgaatt tactgaaaaa actttagaga ataatttttc
    14821 tcaaatggag ctttataaag aatttgctaa aaaacataat atcaaaatta tcgatagtta
    14881 tacaaatttc atcacttatt tttttgatga aaaaaatagt acagatttgt ctgaaaaatt
    14941 gcttaaaaag ggtataataa taagaaattt aaaaagctat ggtttaaatg ctatacgcat
    15001 tactatagga acatcttatg aaaatgaaaa attttttaca gaatttgata agattttaag
    15061 atagataaat caaataaaaa tatgtaaaat tcgctaaact aagggatgag aattaatgga
    15121 ttttaaaaat atgcttcatc aaattgggca actttatcaa aatttaactc gcaagcagcg
    15181 tatagtgatt gctgcatcta ttatagttgt ggttgggttt ttggtttttt tagctttatt
    15241 tcatggaagt ggtagtaatg caaataatgg atatgcagtt ttagttgaaa atgtaagccc
    15301 aagttcttct gctgcaattg tagctaaact tgaacaaaat aatattccct ataaattaga
    15361 aagtgaaaat aaaattttag ttccacaaga tcaggtttat cgtcaaagaa tgtttattgc
    15421 aagcgaaggt cttataaaag atagtcgcgt gggttttgaa gcttttgata ctcaagcttt
    15481 tggagctaca aatgaagagc aaaaggtaaa ataccaaaga gccatagaag gcgaacttgc
    15541 aagaactatt gagactttag aacctattcg tagcgctgtt gtacacatag catttcctaa
    15601 agatagtgtt tttactgaaa ggcaaattcc gcctacagct tcagttgttg ttaatgttcg
    15661 cgaaggctta aagcttacta gaaaacaaat tgatggtata aaaaatattg tttcagcggc
    15721 agttccaaaa cttactaaag aaaatgttaa gattagtgat caaagtggtg tgcctttaga
    15781 tgagcaagaa gcatatgaag atgacttggt tcgtgcgcaa attaaattta aaagtgatca
    15841 agaaaaagct ttagaagata agattataga aaatttagct ccttttgcag gtggcatgga
    15901 taaagtaaaa gtgagtgtaa atatagattt tgatttttcc aagcaagaat ctcaaagtga
    15961 aatttatgat ccaaatccta tagtacgtag tgagcaaact ttaaacgagg aaagaacagg
    16021 tagaaaagat ccagaaattc agggtgttcc aggtgctgtt tctaatatag gtcctgttga
    16081 aggacttgac aataagggtc aaattgacac ttataaaaaa aatcaagtta ctacaaataa
    16141 tgaactttct aaaactatca caaataccaa aaaacaattt gcaacagttt tacgcacttc
    16201 agcagctgtt actatagatg gaaaatatca agatgtggtt gatgaaaatg gggatgtgaa
    16261 aagcgaatat gtcccattga ctaaagaaga gcttgcaagt gttgagagta tagttaaaaa
    16321 tactattaat tttagcgcta ctagaggtga tagtgttgtg gtgcaaaatt taccatttca
    16381 tcgtgagtcg attagagttg agagtaaagt taaaactttt tacaatcgtt ttgttgagcc
    16441 atttattccg ccggttaaat actttattgc agcgatttta ctttttattt tttacaaaaa
    16501 agttattgct ccatttactc aaaaaatgct tgaagatgtc gcagcacaag aggaaatgca
    16561 gcaaggtcca aatgctgttt tagatgatgc tgaagatgct ttagagaaat ttaatgcagc
    16621 aaggaaaaaa gttgaagaac aacttggttt tggggataac ttcaatgaag attctatcca
    16681 gtatgaggtt ttgcttgaaa aattgcgtgg tttggtaagt gataaaggtg aggaaattgc
    16741 agcacttttg caaaacttaa ttcaaaatga tagcgaattt ggcgaaaagg atatgtgatg
    16801 ataaagctaa gtgaagaaca aaaaatggtc tatgatgatt tatcgatgcc tgagaaggta
    16861 gcgatatttc ttatacaact tggcgaagat gcaaccactt ctgtgttttc acatatggaa
    16921 attgatgtaa tcacagaaat ttcacgttat attgctatgg ctaaaaatgt tgatagatct
    16981 gtagctactg cagttttaga agaattttac actctgcttc aatcaaatca atatattaaa
    17041 agtggtggtt tggaatatgc taaagaaata ctttttcgta cttttggacc agagattgca
    17101 aataaaattc ttgaaaaact cactaaaagt atggagaata atcaaaattt tgcttatttg
    17161 gcgcaaatta aaccacagca acttgcagac tttattacca aagagcaccc acaaaccatc
    17221 gctcttattt tggcacacat ggattctatt catgcggcag aaactttaga gtattttagc
    17281 gatgaattaa gggctgaggt ggttataaga atggcaaatc ttggtgatat ttctccaagt
    17341 attattaaaa gagtttctgc agtgctagaa agcaagcttg aaagtcttac ctcttataag
    17401 gttgaagtgg gcggcccaag agcagtagca gaagtgctta atcgtttggg tcaaaaagca
    17461 agcaaatcaa ccattactta tattgaacaa agtgatgaac gcttagcaga gactattaaa
    17521 gagcttatgt ttactttcga tgatatacaa aaacttagca ctcaggctat aagagaaatt
    17581 ttaaaagtag ccgataagcg tgatttaatg ataggtttaa aaggtgcaag tgaagagtta
    17641 aagcaaaaat tcttagccaa tatgtctacg cgtgcaagcg aagcttttct tgaagaaatg
    17701 ggttttttgg gtgctgtgcg tgttaaagat gttgaagatg cacaaagaaa ggttgttgaa
    17761 gtggtgcaaa aacttgcaga acaaggtctt gttcaaacag gcgatgcgga tgaaatgata
    17821 gagtaggtga gagatggtta atcgtagtaa tgtaatttct ggtggggctt ctgatcagca
    17881 tgttgttgaa ggatatcgtt ttaaagttat ttcagaattt gataatcata caggtgaaaa
    17941 aaaacatact caaactccag atgaagaaaa tactaatata tctttaaatg acgaaaaacc
    18001 agtcgaagaa aatcaagtca ttgcctctac acaagctgtt atggaaactc aaattccaac
    18061 atttcaacca agctttgttg aagatttact taaaaaaaca gatgaaatgt caagcaatat
    18121 tattaaactt caaatgcaaa tagaaagcca agagaatgaa tttaataacc gcttaaattc
    18181 agaacttgaa aatgctaaag aaaaatttac caaagagggt tatgagaaag caaaagaaga
    18241 atttcaaaag gaattgagtg attttaaaga taagtattta aaaagtatag ccaaacttga
    18301 taatgcttgc gaaaatcttg aaaatttcat agaaaaaaat gagaaagaat tagcagatac
    18361 tgctatagat atcgctaaag aagtaatctt aaaagaactt gaactaaatt caagtaagat
    18421 agcttatgct ttggctaaag atttaatcgg tgagcttaag ggtgctagtg caattgagct
    18481 taaggttaat gcagaggatt atgagtattt aaaagagcaa tttgatcaga atgctcatat
    18541 taaaataagt cttgatgatg caattagcaa aggaagtgtt gttattataa gtgacgcagg
    18601 caatatagaa tccaatctta actctcgtct aactaaaatt aaaaaaatgg tgaataatga
    18661 gtaaaaaatt tgcccatact caagaagagt tagaaaagct aagtttaaaa gaattagaaa
    18721 atttagcagc atctatgcgt gaaaaaatca tacaagttgt gagtaaaaat ggtgggcatt
    18781 taagttcaaa tttgggtgct gtagaactta gtatagcaat gcatttggtt tttgatgcaa
    18841 aaaaagatcc ttttattttt gatgtgtcgc atcagtctta tacacacaag cttttaagcg
    18901 gaaaagaaga aatatttgat actttaagac aaatcaatgg tttaagtggt tatacaaaac
    18961 ctagcgaggg agattatttt gtagcagggc attctagtac ctctatttct ttggcagtag
    19021 gtgcttgtaa ggctattgct ttaaagggtg aaaagcgtat tcctgttgct ttgattggag
    19081 atggtgcttt aagtgcgggt atggcctatg aggctttaaa tgaattgggt gattctaaat
    19141 ttccttgcgt aatactttta aatgataatg aaatgagtat ttcaaaacca attggagcaa
    19201 tttcaaagta tctttctcag gctatggcaa cgcagtttta tcaaagtttt aaaaagcgta
    19261 ttgctaaaat gttggatata ttgcctgata gtgctactta tatggccaag cgttttgaag
    19321 agagttttaa acttattacc cctgggcttt tgtttgaaga attagggctt gaatatatag
    19381 ggcctattga tggacataat ttaggtgaaa ttatttctgc attaaaacaa gcaaaagcta
    19441 tgcaaaagcc ttgtgtgata catgctcaaa ccataaaggg taaaggctat gctttagctg
    19501 aaggaaaaca tgctaaatgg cacggggtgg gagcctttga tatagatagt ggagagagtg
    19561 ttaaaaaaag tgatactaaa aaatctgcta ctgaaatttt ttctaaaaat ttgcttgatt
    19621 tagcctcaaa atatgaaaat attgttgggg ttacggcggc tatgccaagt ggaacaggtc
    19681 ttgataagct tatagaaaaa tatccaaatc gtttttggga tgtggctatt gcagaacagc
    19741 atgcagtaac ttctatggcc gctatggcaa aagaaggatt taaacctttt attgcaatat
    19801 atagcacctt tttgcagcgt gcttatgatc aagtgatcca tgattgtgcg attatgaatt
    19861 taaatgtggt ttttgctatg gatagggcag ggatagtagg cgaagatggg gagacgcatc
    19921 aaggtgtttt tgatcttagt tttttagctc ctttgccaaa tttcactctt ttagccccaa
    19981 gagatgaaca aatgatgcaa aatataatgg agtatgctta tttacatcaa ggacctattg
    20041 ctttgcgtta tcctagaggg agttttattt tggataaaga atttaatcct tgtgagataa
    20101 aacttggtaa ggcacaatgg cttgtaaaaa ataatagtga aattgctttt ttaggttatg
    20161 gacaaggtgt ggcaaaagcg tggcaagtct taagagcctt gcaagaaatg aataataatg
    20221 ctaatttgat tgatttaatt tttgctaaac ctttagatga agagcttttg tgtgagcttg
    20281 ctaaaaaaag taaaatttgg tttattttta gtgaaaatgt taaaattggc ggtatagaaa
    20341 gtttaattaa taatttttta caaaaatatg atttgcatgt aaaagttgtt agctttgaat
    20401 atgaagacaa atttattgaa catggaaaaa caagtgaggt ggaaaaaaat ctagaaaaag
    20461 atgtcaatag tttgttgacg aaagt
//
LOCUS       DAPIVO010000031        20161 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.031, whole genome shotgun sequence.
ACCESSION   DAPIVO010000031 DAPIVO010000000
VERSION     DAPIVO010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20161)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20161)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20161
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.031"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..737
                     /locus_tag="RJ239_000987"
     CDS             <1..737
                     /locus_tag="RJ239_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HDV7331115.1"
                     /translation="FHSFQNFYEDFKSHKFNFNHEHQSIFKKNTSQQITLLHPTRIRR
                     PKFVNSTHALAKIIHSVAHIEFNAINLALDASYRFKNLPLQFYYDWLEVADEEIKHFK
                     LLNSALKELGYKYGNFPVHDNLESALEATKDSLSFRMGVVHRGLEAKGLDANPFVVQK
                     LQSSNHSIKNLLMEYLEIILNDEIKHVKKGDTWWKFANQNRYDFIELCKTFKQFSLAG
                     KKLNIQARIKAGFTQEECEVIEKFYS"
     gene            complement(728..1456)
                     /gene="pssA"
                     /locus_tag="RJ239_000988"
     CDS             complement(728..1456)
                     /gene="pssA"
                     /locus_tag="RJ239_000988"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HDV7331116.1"
                     /translation="MNNRPQLIYILPNLFTAASAFLGVISIIASIHGNYYTALIYIIL
                     SLICDGLDGRVARLTNSTSKFGVEFDSLADLVAFGVAPAVLFYMAIGYDFGKLGSLIT
                     AFFVVFGAIRLARFNVTTGTYEPSVFIGLPIPTAAVVSAIWTYAFISYDFLKPYGVVF
                     LVLQAILGLLMVSNIRYPSFKKLDFNRSSVLKVLIILIIIFSFLYLYPLESLVILASL
                     YVLYGIIRVLYTIIVSKFKTRNQE"
     gene            complement(1466..2083)
                     /locus_tag="RJ239_000989"
     CDS             complement(1466..2083)
                     /locus_tag="RJ239_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDV7331117.1"
                     /translation="MKDFIAKYGYLSLIILSLIFIFVWIFYSFSILLLALIVICIFLF
                     RAPKRELVCSDEKAIFAPMDGRVTKIENIHHKDLGECVEIAIKNALYDAGNFNTPFAM
                     SIIDIRLRHGLFLCSELKSAKMMNERAFILAKVKENKTIALRIYAGSFDRKLKLDNIS
                     HDLKAGDRMGFLINGSISLLLPKDTRIHIGLNDEIKAGSLLGYFA"
     gene            complement(2080..4017)
                     /gene="ftsH"
                     /locus_tag="RJ239_000990"
     CDS             complement(2080..4017)
                     /gene="ftsH"
                     /locus_tag="RJ239_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HDV7331118.1"
                     /translation="MNNNTQNNKGNPQGNNFFNKNPIFIFAIFAIIMIIIFKGFFDGN
                     GSFGGALNGNEVNKNVPYSELKKLIESGQINQVSIGQTTIKAISSSHNTVYTAKKVND
                     PELVSLLDSKNIAYGAYSETNWFTDILFSWVLPVFIFFGIWMFLASRMQKNMGSSILG
                     IGSSKKLVNSEKPKVKFSDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLLLVG
                     PPGTGKTLLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFI
                     DEIDAIGKSRAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAA
                     LLRPGRFDRQVLVDKPDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLANI
                     INEAALLAGRDSKKYVEQNDLVEAVERAIAGLEKKSRRINEKEKKIVTYHECGHALIA
                     ETTKGAKRVSKVSVIPRGLAALGYTLNTPEENKFLMQKHELIAEVDVLLGGRAAEEVF
                     IGEISTGASNDLERATDIIKAMISMYGMSEIAGLMVLEKQRNTFLSGGQTIKDYSEKM
                     AESLDDYVKKTLDERYKDVKDTLNTYKGAIETMVAALYEEETIEGNKVREIIKEFEDQ
                     NSLPTRLQELEEVKTEVKVEE"
     gene            complement(4021..4866)
                     /locus_tag="RJ239_000991"
     CDS             complement(4021..4866)
                     /locus_tag="RJ239_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HDV7331119.1"
                     /translation="MQKKYYELFFIVEEQYKNLFLDFAFDLGIEAIEEKDNGVYIRSH
                     ESLEEFSWALEIFAQKLTTTFNLNHKIISNLSLVEKENKDWIQEYKKGIKPILVDNVY
                     IHTTWQEEKKNCINIKINPALAFGSGHHESTYSCVKFLQKFSKSKLRALDLGCGSGIL
                     GIIMAKFGCNVEICDTDELAIDSSLENARLNGVDFHKAWCGSIDKANGLYNLIVANII
                     VDVILILEKDIKNHLEDNAILILSGILDKYSTRIKEKFQDLELIDEMQINEWCSFVYK
                     NNKKG"
     gene            complement(4889..5281)
                     /locus_tag="RJ239_000992"
     CDS             complement(4889..5281)
                     /locus_tag="RJ239_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator CheY"
                     /protein_id="HDV7331120.1"
                     /translation="MKLLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKN
                     EDVKVLITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNY
                     IVKPFTPQVLKEKLEDVLGTGSGEGAAE"
     gene            complement(5394..6287)
                     /locus_tag="RJ239_000993"
     CDS             complement(5394..6287)
                     /locus_tag="RJ239_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDC sensor domain-containing protein"
                     /protein_id="HDV7331121.1"
                     /translation="MYIKDIQRFEDNRYRARAYMSYILTRNLPNKLPDIHLETIKTAL
                     DKIAHEVVVFDALYILDISGMQIENAISLNKAHEIGQGEDRSTRSYFYRAVKLRRCVL
                     SDPYPSVLNNELCVTASMPIYDDKNNLLFVVCIDIKLEDILKIIQAGKFEFVFTQFSR
                     LVYFCFALVLFVITCFLFQKGFFSLFDNQAIGIEHMFESTIAITLALAIFDLAKTLIE
                     QEVLGRTKKEEGGIQKTMVRFLGSIIIALAIEALMLVFKLAIGDLSQMIYAIYLIGGV
                     SLLLLGLSVYLFTVKYKNNNI"
     gene            complement(6287..8059)
                     /gene="pglF"
                     /locus_tag="RJ239_000994"
     CDS             complement(6287..8059)
                     /gene="pglF"
                     /locus_tag="RJ239_000994"
                     /EC_number="4.2.1.135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (configuration-retaining)"
                     /protein_id="HDV7331122.1"
                     /translation="MIFYKSKRLAFFLTSDIVLILLSVYLAFSLRFSGDIPSIFYHGM
                     MVSAIILLVLKLSFLFVFRIYKVAWRFFSLNEARKIFIALLLAEFCFFLIFYFFSDFF
                     NPFPRSAIVIDFVLSYMFIGTLRISKRMLVDFKPSRMKEEETPCIVVGATSKALHLLK
                     GAKEGSLGLFPVGVVDARKELIGTYCDKFIVEEKEKIKSYVEQGVKTAIIALRLEQEE
                     LKKLFEELVAYGICDVKIFSFTRNEARDISIEDLLARKPKDLDDSAVAAFLKDKVVLV
                     SGAGGTIGSELCKQCIKFGAKHLIMVDHSEYNLYKINDDLNLYKEKITPILLSILDKQ
                     SLDEVLKTYKPELILHAAAYKHVPLCEQNPHSAVINNILGTKILCDSAKENKVAKFVM
                     ISTDKAVRPTNIMGCTKRVCELYTLSMSDENFEVACVRFGNVLGSSGSVIPKFKAQIA
                     NNEPLTLTHPDIVRYFMLVAEAVQLVLQAGAIAKGGELFVLDMGKPVKIIDLAKKMLL
                     LSNRNDLEIKITGLRKGEKLYEELLIDENDAKTQYESIFVAKNEKVDLDWLNKEIENL
                     QICEDISEALLKIVPEFKHNKEGV"
     gene            complement(8061..9221)
                     /gene="pglE"
                     /locus_tag="RJ239_000995"
     CDS             complement(8061..9221)
                     /gene="pglE"
                     /locus_tag="RJ239_000995"
                     /EC_number="2.6.1.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylbacillosamine transaminase"
                     /protein_id="HDV7331123.1"
                     /translation="MRFFLSPPHMGGNELKYIEEVFKSNYIAPLGEFVNRFEQSVKAY
                     SKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICYLKAKPVFIDCD
                     ETYNIDVDLLKLAIKECEKKPKALILTHLYGNAAKMDEIVEICKENEIVLIEDAAEAL
                     GSFYKNKALGTFGEFGAYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLH
                     YEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGECFSFLDELENS
                     RSNRWLSTALIDFDKNELNSCQKDINISQKNITLHPKISKLIEDLKNEQIETRPLWKA
                     MHAQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIKA"
     gene            complement(9317..9970)
                     /locus_tag="RJ239_000996"
     CDS             complement(9317..9970)
                     /locus_tag="RJ239_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331124.1"
                     /translation="MKKVFLWEYLQKGCKLHFNNNLVVHYIVNPSPLGWIVINLLTIC
                     LICYIFPLKNSLKHKKLFSLKANVNSKNSRIIKYTGIAAFLGGLIGIWYNFEGFYQLL
                     FFFELENENLKTLWSLQVSVSSVITGMLLLLIYVINLAMVCENGIYIVSKFNLFYMYF
                     IKREDLEIVKIEKMKFLNQVEVCFVIKTKNKILLKCFESIYKKEDLEKLKNWYENKL"
     gene            complement(9927..10514)
                     /gene="pglD"
                     /locus_tag="RJ239_000997"
     CDS             complement(9927..10514)
                     /gene="pglD"
                     /locus_tag="RJ239_000997"
                     /EC_number="2.3.1.203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylbacillosamine N-acetyltransferase"
                     /protein_id="HDV7331125.1"
                     /translation="MARTEKIYIYGASGHGLVCEDVAKNMGYKECIFLDDFKGMKFES
                     TLPKYDFFIAIGNNEIRKKIYQKISENGFKIVNLIHKSALISPSAIVEENAGILIMPY
                     VVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVL
                     PNLSLADDSILGGGATLVKNQDEKGVFVGVPAKRM"
     gene            complement(10501..11103)
                     /gene="pglC"
                     /locus_tag="RJ239_000998"
     CDS             complement(10501..11103)
                     /gene="pglC"
                     /locus_tag="RJ239_000998"
                     /EC_number="2.7.8.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl phosphate
                     N,N'-diacetylbacillosamine 1-phosphate transferase"
                     /protein_id="HDV7331126.1"
                     /translation="MYEKVFKRIFDFILSLVLLVLFSPVILITALLLKITQGSVIFTQ
                     NRPGLDEKIFKIYKFKTMSDERDEKGELLSDELRLKAFGKIVRSLSLDELLQLFNVLK
                     GDMSFVGPRPLLVEYLPLYNKEQKLRHKVRPGITGWAQVNGRNAISWQKKFELDVYYV
                     KNISFLLDLKIMFLTALKVLKRSGVSKEGHVTTEKFNGKN"
     gene            complement(11096..12226)
                     /gene="pglA"
                     /locus_tag="RJ239_000999"
     CDS             complement(11096..12226)
                     /gene="pglA"
                     /locus_tag="RJ239_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,
                     N'-diacetylbacillosaminyl-diphospho-undecaprenol
                     alpha-1,3-N-acetylgalactosaminyltransferase"
                     /protein_id="HDV7331127.1"
                     /translation="MRIGFLSHAGASIYHFRMPIIKALKDRKDEVFVIVPQDEYTQKL
                     RDLGLKVIVYEFSRASLNPFVVLKNFFYLAKVLKNLNLDFIQSAAHKSNTFGILAAKW
                     AKIPYRFALVEGLGSFYIDQGFKANLVRFVINSLYKLSFKFAHQFIFVNESNAEFMRN
                     LGLKENKICVIKSVGINLKKFFPIYVESEKKELFWKNLNIDKKPIVLMIARALWHKGV
                     KEFYESATMLKDKANFVLVGGRDENPSCASLEFLNSGAVHYLGARSDIVELLQNCDIF
                     VLPSYKEGFPVSVLEAKACGKAIVVSDCEGCVEAISNAYDGLWAKTKNAKDLSEKISL
                     LLEDEKLRLNLAKNAAQDALQYDENIIAQRYLKLYDRVIKNV"
     gene            complement(12236..14377)
                     /gene="pglB"
                     /locus_tag="RJ239_001000"
     CDS             complement(12236..14377)
                     /gene="pglB"
                     /locus_tag="RJ239_001000"
                     /EC_number="2.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphooligosaccharide--protein
                     glycotransferase"
                     /protein_id="HDV7331128.1"
                     /translation="MLKKEYLKNPYLVLFAMIVLAYVFSVFCRFYWVWWASEFNEYFF
                     NNQLMIISNDGYAFAEGARDMIAGFHQPNDLSYYGSSLSTLTYWLYKITPFSFESIIL
                     YMSTFLSSLVVIPIILLANEYKRPLMGFVAALLASVANSYYNRTMSGYYDTDMLVIVL
                     PMFILFFMVRMILKKDFFSLIALPLFIGIYLWWYPSSYTLNVALIGLFLIYTLIFHRK
                     EKIFYIAVILSSLTLSNIAWFYQSAIIVILFALFALEQKRLNFMIIGILGSATLIFLI
                     LSGGVDPILYQLKFYIFRSDESANLTQGFMYFNVNQTIQEVENVDFSEFMRRISGSEI
                     VFLFSLFGFVWLLRKHKSMIMALPILVLGFLALKGGLRFTIYSVPVMALGFGFLLSEF
                     KAILVKKYSQLTSNVCIVFATILTLAPVFIHIYNYKAPTVFSQNEASLLNQLKNIANR
                     EDYVVTWWDYGYPVRYYSDVKTLVDGGKHLGKDNFFPSFSLSKDEQAAANMARLSVEY
                     TEKSFYAPQNDILKSDILQAMMKDYNQSNVDLFLASLSKPDFKIDTPKTRDIYLYMPA
                     RMSLIFSTVASFSFINLDTGVLDKPFTFSTAYPLDVKNGEIYLSNGVVLSDDFRSFKI
                     GDNVVSVNSIVEINSIKQGEYKITPIDDKAQFYIFYLKDSAIPYAQFILMDKTMFNSA
                     YVQMFFLGNYDKNLFDLVINSRDAKVFKLKI"
     gene            complement(14381..15478)
                     /gene="pglJ"
                     /locus_tag="RJ239_001001"
     CDS             complement(14381..15478)
                     /gene="pglJ"
                     /locus_tag="RJ239_001001"
                     /EC_number="2.4.1.291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylgalactosamine-N,
                     N'-diacetylbacillosaminyl-diphospho-undecaprenol
                     4-alpha-N-acetylgalactosaminyltransferase"
                     /protein_id="HDV7331129.1"
                     /translation="MQKLGIFIYSLGSGGAERVVATLLPILSLKFEVHLILMNDKISY
                     EIPECQIHFLECSKPSENPILKFLKLPFLALKYKKLCRNLGIDTEFVFLNRPNYIALM
                     ARMFGNKTRLVINECTTPSVMYMKNNFNSLVNKFLISLLYPKADLILPNSKGNLEDLV
                     QNFSISPKKCEILYNAIDLENIGQKALEDIALKDKFILSVGRLDKGKNHALLIRAYAR
                     LKTDLKLVILGEGVLKDELLALIKELNLEEKVLLLGFDNNPYKYMAKCEFFAFASVFE
                     GFSNVLIESLACSCAVVCTDHKSGARELFGDDEFGLLVEVDNENSMFQGLKTMLEDDK
                     LRKAYKNKAKTRAKAFDKVKIARDALKYLLG"
     gene            complement(15466..16395)
                     /gene="pglI"
                     /locus_tag="RJ239_001002"
     CDS             complement(15466..16395)
                     /gene="pglI"
                     /locus_tag="RJ239_001002"
                     /EC_number="2.4.1.293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GalNAc(5)-diNAcBac-PP-undecaprenol
                     beta-1,3-glucosyltransferase"
                     /protein_id="HDV7331130.1"
                     /translation="MPKLSVIVPTFNRQVLLEKAIKSIQNQDFKDLEIIVSDDNSSDD
                     TKSVVQNLQKDDDRIKYFLNQNYKQGPNGNKNNGLDQASGEFVTFLDDDDELLSGALS
                     TLMQKANEGYAHVFGNCLIEKEGNLSKEFSGKGLEKDSEISKKDFLMAKFSGEFFSVF
                     KKSLLENKRFNEEFYGNEATLWVNLYKEKSFYIHKAFRIYRIFRQDSVTLGASKNAYR
                     VYLGYLELAKILENELRMSKDKDYKKTCASYYKMAAYYAKLAKNYKALYKCLFKSLSI
                     KINAPALILLILSIIPNNMIEKLSKIRVALCKN"
     gene            complement(16388..17467)
                     /gene="pglH"
                     /locus_tag="RJ239_001003"
     CDS             complement(16388..17467)
                     /gene="pglH"
                     /locus_tag="RJ239_001003"
                     /EC_number="2.4.1.292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-
                     diNAcBac-PP-undecaprenol
                     alpha-1,4-N-acetyl-D-galactosaminyltransferase"
                     /protein_id="HDV7331131.1"
                     /translation="MMKISFIIATLNSGGAERALVTLANALCKEHEVSIIKFHAGESF
                     YKLENEVKVTSLEQFRFDTLYHKIASRFKKFFALRKALKESKSDVFISFLDTTNIACI
                     AAKIGLKTPLIISEHSNEAYLKPKIWRFLRRVSYPFCDALSVLGSSDKVYYERFVKRV
                     KLLLNPCHFSDEISFDSSFEKENLVLFIGRLDHNKNPVMFLKAIAHLDKNLQENYKFV
                     IAGDGQLRQELEYKVKSLGIKVDFLGRVENVKALYEKAKVLCLCSFVEGLPTVLIESL
                     YFEVCRISSSYYNGAKDLIKDNHDGLLVGCDDEIALAKKLELVLNDENFRKELVNNAK
                     QRCKDFEISHIKEEWLKLIAEVKNA"
     gene            complement(17464..19158)
                     /gene="pglK"
                     /locus_tag="RJ239_001004"
     CDS             complement(17464..19158)
                     /gene="pglK"
                     /locus_tag="RJ239_001004"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-type lipopolysaccharide transporter PglK"
                     /protein_id="HDV7331132.1"
                     /translation="MLKKLFFILSKEDKNFLFFLLVFSVFISFIETFAISLVMPFITL
                     ASDFSYFDRNKYLISLKEYLNIPVFEIIVYFGVGLIVFYVFRALLNAYYFHLLARFSK
                     GRYHAIAYKVFSKFLNINYEKFTQKNQSEILKSITGEVYNLSTMISSFLLLMSEIFVV
                     LLLYALMLLINYKITLFLSIFMVLNAFILVKILSPIIKKAGVRREEAMKNFFEILNTN
                     LNNFKFIKLKTKEDGVLSLFKAQSEAFSKANITNESVAAVPRIYLEGIGFCVLVFIVV
                     FLVLKNESDISGILSTISIFVLALYRLMPSANRIITSYHDLLYYHSSLDIIYQNLRQE
                     EENLGEEKLSFNQELKICNLSFGYEGKKYLFKNLNLNIKKGEKIAFIGESGCGKSTLV
                     DLIIGLLKPKEGQILIDEQELNANNTKNYRQKIGYIPQNIYLFNDSIAKNITFGDAVD
                     EEKLNRVIKQANLEHFIKNLPQGVQTKVGDGGSNLSGGQKQRIAIARALYLEPEMLVL
                     DEATSALDTQSEAKIMDEIYKISKDKTMIIIAHRLSTITQCDKVYRLEHGKLKEEK"
     gene            complement(19152..20138)
                     /gene="galE"
                     /locus_tag="RJ239_001005"
     CDS             complement(19152..20138)
                     /gene="galE"
                     /locus_tag="RJ239_001005"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HDV7331133.1"
                     /translation="MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDL
                     QKTRAFKFFEQDLSDFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNT
                     TNLIETCLQTGVNKFIFSSTAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDA
                     SMANPEFKHCILRYFNVAGACMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDY
                     DTKDGTCIRDFIHVDDISSAHLAALDYLKENESNVFNVGYGHGFSVKEVIEAMKKVSG
                     VDFKVELAPRRAGDPSVLISDASKIRNLTSWQPKYDDLELICKSAFDWEKQC"
BASE COUNT         7192 a         3818 c         2290 g         6861 t
ORIGIN      
        1 aatttcactc ttttcaaaat ttttatgaag actttaaaag ccacaaattt aattttaatc
       61 acgagcatca aagcattttc aaaaaaaata catcacaaca aattaccttg cttcatccta
      121 cgcgtataag aaggcctaaa tttgtcaatt caactcatgc gcttgctaaa ataattcatt
      181 cagtcgctca tatagaattt aatgcaatta acctggcttt agatgcgagt tatcgcttta
      241 aaaatctacc tttgcaattt tattacgatt ggctggaggt agcagatgag gaaattaaac
      301 atttcaaact tttaaattca gcacttaaag aacttggtta caaatatgga aattttccag
      361 tgcatgataa tttagaatct gctctagaag ctacaaaaga ctctttaagc tttagaatgg
      421 gagtagttca tagaggttta gaagctaaag ggcttgatgc caaccccttt gttgttcaaa
      481 aacttcaaag ttccaatcat tccattaaaa atcttctaat ggaatatctt gaaattatac
      541 ttaatgatga aataaaacac gttaaaaaag gagatacttg gtggaaattt gcaaaccaaa
      601 acaggtatga ttttattgag ctttgcaaaa catttaaaca attctctctt gcaggaaaaa
      661 aacttaacat tcaagcaaga atcaaagctg gcttcactca agaagaatgc gaagtcattg
      721 aaaaatttta ctcttgattt cttgtcttaa attttgaaac gataatagta tataaaactc
      781 gaataattcc ataaagcaca tacaagcttg ctaaaattac taaactttca agagggtaaa
      841 gatataaaaa tgaaaatatt ataattaaaa taatcaaaac ttttaaaaca ctagaacgat
      901 taaaatcaag ctttttaaag ctaggatagc gtatattact taccattaaa agccctaaaa
      961 ttgcttgaag caccaaaaaa actacaccat aaggctttaa aaaatcataa ctgataaatg
     1021 cataagtcca tatagcactc acaactgctg cagtaggtat aggaagacct ataaaaacgg
     1081 agggttcata agtgcctgtg gtaacattaa atctcgccaa acgaatagct ccaaaaacca
     1141 caaaaaaagc tgtaatcaaa gatccaagct ttccaaaatc ataacctata gccatataaa
     1201 aaagaaccgc tggagcaact ccaaaagcta ctagatcagc taaagaatca aattctactc
     1261 caaattttga agtagaattt gtaagtcttg caacgcggcc atcaagccca tcgcaaatca
     1321 aagataaaat aatataaatc aaagctgtat aataatttcc atgtattgaa gctataatag
     1381 aaataacccc taaaaaagct gaagcagctg taaaaagatt gggtaaaata taaattagtt
     1441 gcggtctgtt attcattatt tttccttacg caaaatagcc tagcaatgaa cctgctttaa
     1501 tttcatcatt taagcctata tgaattctag tatcttttgg taaaagtaaa cttatagagc
     1561 cattaattaa aaaacccatt ctatctcctg cttttaaatc atgagaaata ttatcaagct
     1621 ttaattttct atcaaaagaa cctgcataga ttcgcaaggc tatcgtttta ttctctttaa
     1681 cttttgccaa aataaaagct ctttcattca tcatttttgc agattttaat tcactgcaca
     1741 aaaaaagccc atgtcgtaaa cgaatatcta ttatagacat tgcaaaaggt gtattaaaat
     1801 tcccagcatc ataaagagca tttttaatag caatttcaac acattcaccc aaatctttat
     1861 gatgaatatt ttctatttta gtaaccctac catccatagg tgcaaaaata gctttttcat
     1921 cactacaaac aagttctctt ttgggcgctc taaaaagaaa aatacaaatt acaattaatg
     1981 ctaatagcaa gatggaaaaa gaataaaaaa tccacacaaa aataaaaatt aagcttaaaa
     2041 taataagact taaatatcca tattttgcaa taaaatcttt cattcttcta ctttaacttc
     2101 agttttaact tcttcgagtt cttgtaaacg agttggtaga ctattttgat cctcaaactc
     2161 tttaataatc tcgcgcactt tattaccttc aatagtttct tcttcataaa gggctgcaac
     2221 catagtctca atcgctccct tataagtatt taaagtatct ttaacatctt tatagcgttc
     2281 atccaaggtt ttctttacat aatcatctaa agattctgcc atcttttcag aataatcttt
     2341 gatagtttgt ccaccactta agaaagtatt tctttgtttt tcaagtacca taagtcctgc
     2401 aatttcactc ataccataca tagaaatcat agcttttatg atatcggttg ctctttctaa
     2461 atcattactt gcacccgttg aaatttcacc tataaacact tcttcagctg cacgaccacc
     2521 caaaagtaca tctacttcag cgataagttc atgtttttgc attaaaaatt tattttcctc
     2581 aggagtattt aaagtataac ctaaagccgc aagaccacgc ggaatcacag aaaccttact
     2641 tacacgtttt gcgcctttgg tagtttcagc aatcaaagca tgaccgcatt catgataagt
     2701 aacaattttc ttttcttttt cattaatacg acgtgatttc ttctcaagcc ctgctatagc
     2761 tctttcaaca gcttcaacta aatcattttg ttctacatat tttttagaat ccctacccgc
     2821 taaaagcgct gcttcattaa taatatttgc aagatcagct cctgcaagcc ctgcggttaa
     2881 gcgtgctata tcttctactt taacttttgg ggagattttg acatctttca tgtgcacttt
     2941 taaaatatca cacctacctt taaaatcagg tttatcaact aaaacttgtc tatcaaacct
     3001 tcctggtctt aaaagcgctg catctaaaac ttctgggcga tttgttgctg ctaaaacaat
     3061 gactggggaa ctttctgtcc caaagccatc catttcagcc aaaagctgat ttaaagtttg
     3121 ctctctttca tcgtttccac ccatcatgcc acttgctgca cgacttttac caatagcatc
     3181 tatttcatct ataaaaacaa tagcaggagc ttcttttttt gcattttcaa ataaatctct
     3241 cacacgagaa gcacctacac ccacaaacat ttctataaaa gacgaacctg aaacactaaa
     3301 aaacggcaca tcagcttcac ctgcaactgc ttttgcaagc aaagtttttc ctgtacctgg
     3361 aggcccaaca agtaaaagcc cttttggaat tttagctccc aatttaatat atctttcagg
     3421 atactttaaa aaatctacaa tttcttttac ttcttcttta gcttcttcaa caccagctac
     3481 atcgctaaat tttactttag gtttttctga atttacaagc ttcttagaac ttcctatacc
     3541 caatatagaa cttcccatat ttttttgcat acgacttgcc aaaaacatcc aaataccaaa
     3601 gaaaataaat actggcaaaa cccatgaaaa aagtatatcc gtaaaccaat ttgtttcaga
     3661 atacgcacca taagcgatat ttttactatc tagtaaactc acaagctcag gatcattaac
     3721 tttttttgct gtataaacag tattgtgaga gcttgaaatc gctttgattg ttgtttgtcc
     3781 tatactaact tgattgattt gtccactttc aataagcttt tttaactcag aataagggac
     3841 atttttattt acttcattgc cattcaatgc cccgccaaaa gaaccattgc catcaaaaaa
     3901 tcccttaaaa ataattatca ttataattgc aaaaatcgca aaaataaaaa tgggattttt
     3961 gttaaaaaaa ttattaccct gcggattacc cttattattt tgggtattat tattcattac
     4021 ttatcctttt ttattatttt tatatacaaa actacaccac tcattgattt gcatttcatc
     4081 aatgagttcc aaatcttgaa atttttcttt aattcttgtt gaatatttat ctaaaattcc
     4141 tgacaaaata agtatagcat tatcttctaa atggttttta atatcttttt ctaaaattaa
     4201 aatcacatct acaatgatat ttgcaacaat tagattatat aaaccatttg ctttatctat
     4261 agatccacac caagccttgt gaaaatcgac accatttaat cttgcatttt ctaaagaact
     4321 atcaatagcc aactcatcag tatcacaaat ttcaacatta caaccaaact ttgccataat
     4381 aatacccaaa attccactac cacaaccaag atctaaagct cttaatttac ttttagaaaa
     4441 tttttgtaaa aattttacac aagaatatgt gctttcgtga tgtcctgagc caaaggctaa
     4501 ggctggatta atctttatat ttatacaatt cttcttttct tcttgccaag ttgtatggat
     4561 gtaaacatta tccactaaga taggttttat gcctttttta tattcttgta tccagtcctt
     4621 gttttctttc tctacaagac ttaaattaga aataatttta tggtttaaat tgaaagtagt
     4681 tgtaagtttt tgagcaaata tttcaagtgc ccatgaaaac tcttctaaac tctcatggga
     4741 tctaatgtaa acaccattat ctttctcttc tatggcttct atacctaaat caaaagcaaa
     4801 atcaagaaat aaatttttat actgctcttc tacgataaag aacaattcat aatatttttt
     4861 ttgcatttag aattttaaaa atcagccttt actcagctgc accttctcca cttcctgttc
     4921 ctaaaacatc ttcaagtttt tcctttaaaa cttgtggagt aaaaggtttt acaatatagt
     4981 tatttacgcc agcttttaaa gcagtaatca cttcagcttt tccaccctca gttgtaacca
     5041 tgatgatagg catatcttca tattttttct ctgctcttac tttttttacc aactccaagc
     5101 cattcatttc tggcatattc caatctgtaa ttaaaacttt tacatcttca tttttagtta
     5161 ataaatccca agcttcaacg ccatgctcag cttctaaaac atcatcgtgt ccaagtcttg
     5221 ttagggtatt tttaataatc cttctcatag tagaactgtc atcaacaact aacaatttca
     5281 caatttcgtc ctttcaaagt ttttatagtt ttattttacc ctttttagcc ttattaatca
     5341 agctaaaaaa ttttaaaaaa cagcattata tcatctttta cttaaatttt tactcaaata
     5401 ttattatttt tatacttaac cgtaaataaa tatacactta aacctaaaag aagcaaactc
     5461 actccaccga taagataaat cgcataaatc atctgagaaa gatcaccaat agcaagttta
     5521 aataccaaca tcaaagcttc tatagctaaa gcaatgataa tagaacccaa aaatctcacc
     5581 atagtttttt gaattccacc ttcttctttt ttcgtccttc ctaatacttc ttgttcgatc
     5641 aaagtttttg ccaaatcaaa aatagctaaa gccaaagtta tagcgatggt actttcaaac
     5701 atatgttcta tacctatagc ttgattatca aaaagactaa aaaaaccttt ttgaaataaa
     5761 aaacaagtaa tcacaaataa aaccagtgcg aagcaaaaat ataccaaacg actaaactga
     5821 gtaaaaacaa attcaaattt tcctgcttga ataatcttta aaatatcttc aagcttgata
     5881 tcaatacaaa caacaaaaag caagttattt ttatcatcgt aaattggcat agaagctgtc
     5941 acgcaaagct cattatttaa aaccgaagga taaggatcgc tcaaaacaca tcgtcttaat
     6001 tttacagctc tataaaaata agaacgagta cttctatcct caccctgccc tatttcatga
     6061 gctttattta aggaaatcgc attttctatt tgcatgcctg aaatatctaa aatatacaaa
     6121 gcatcaaaaa caacaacttc atgagctatt ttatccaaag ctgttttaat cgtttcaagg
     6181 tgaatatcag gaagtttatt gggcagattt cttgttaaaa tataactcat ataagctcta
     6241 gcacgatagc gattatcttc aaatctttgt atatctttta tatacattat acaccttctt
     6301 tattgtgttt aaattcaggt acaatcttta ataaagcctc tgaaatatct tcacatattt
     6361 gtaaattttc tatctcttta ttaagccaat caagatcaac cttctcattc tttgctacaa
     6421 aaatactctc atattgtgtt ttagcatcat tttcatcaat caaaagctct tcataaagct
     6481 tctcaccttt tcttaagcct gtgattttaa tttctaaatc attgcgatta gaaagtaaaa
     6541 gcattttttt agctaaatct atgattttca caggcttacc catatccaaa acaaaaagtt
     6601 ctcccccttt tgcgatagct ccagcttgta aaacaagttg cactgcctca gccacaagca
     6661 taaaataacg cactatatca gggtgcgtta aagttaaagg ctcattattg gcaatttgtg
     6721 ctttaaattt cggtatcaca ctaccactag aacctaaaac attaccaaaa cgcacacaag
     6781 caacttcaaa attttcatca ctcatactta aagtataaag ctcgcaaact ctcttagtgc
     6841 aacccataat atttgttggt cgtactgctt tatctgtact tatcatcaca aatttagcta
     6901 ctttgttttc tttagcactg tcgcataaaa ttttagttcc taaaatatta ttgattactg
     6961 ctgaatgtgg attttgttcg caaagaggca catgtttata agcggctgca tgtaaaataa
     7021 gctcgggttt ataagttttt aatacctcat ctaaactttg cttatctaaa atactcagta
     7081 aaataggagt aattttttct ttatataaat ttaaatcatc attgatctta taaagattat
     7141 actcactatg atcaaccatg ataagatgct tagcaccaaa tttaatacat tgcttacaaa
     7201 gttcactgcc tatagttcca cctgctccac ttaccaaaac taccttatct tttaaaaaag
     7261 ccgccacagc actatcatct aaatcttttg gttttctagc aagcaagtct tctatactga
     7321 tatctcttgc ttcgtttctt gtaaaagaaa atatttttac atcgcaaata ccataagcta
     7381 caagttcttc aaaaagtttt ttaagctctt cttgttcaag tcttaaagca ataatggcag
     7441 tttttacccc ttgttctaca taagatttta ttttttcttt ttcttctaca ataaatttat
     7501 cacaataagt ccctataagc tcttttctcg catcaactac gcctacagga aaaagcccta
     7561 aagaaccttc ttttgcacct tttaacaaat gcaaagcctt agaagttgcc cctactacaa
     7621 tacaaggagt ttcttcttct ttcattctag aaggtttaaa atccacaagc attcttttgc
     7681 taattcttaa agtacctata aacatataag aaagaacaaa atctatcaca atagcacttc
     7741 ttggaaaagg attaaaaaaa tcactaaaaa aataaaaaat aagaaaaaaa caaaactcag
     7801 ctaaaagcaa agcgataaaa atctttcttg cttcattgag agaaaaaaat ctccaagcta
     7861 ctttataaat tctaaaaaca aacaaaaatg aaagttttaa aacaagcaaa ataatagcag
     7921 aaaccatcat accatgataa aaaatactcg gaatatctcc actaaatctc aaagaaaaag
     7981 ccagataaac gctaagtaaa attaaaacaa tatctgaagt taaaaaaaat gctaatcttt
     8041 tgcttttata aaaaatcatt ttaagccttt atgctcttta agatcagttt tgaaatttca
     8101 taaacatcat ctttactcat cgccgtgcca cttggcaaac aaattccttt ttggaaaaat
     8161 aactcactat tgccattaag ataagcctta gctcctttaa atacttcttg agcgtgcata
     8221 gctttccata atggtcttgt ttctatttgt tcatttttca aatcttctat gagttttgaa
     8281 atttttggat gcaaagtaat atttttttga ctgatattta tatctttttg acaagaatta
     8341 agttcatttt tatcaaaatc aatcaaagct gtacttaacc agcgattgct tcttgaattt
     8401 tctaattcat ctaaaaagct aaaacactct cctaaaaatt ctttatacca ctcataaatt
     8461 tctctttttt taagcactct ttgttctaaa acctccattt gcgctacgcc aatagctcct
     8521 aaaacattgc ttaagcggta attataacca taatctaaat gttcataatg caaacaattt
     8581 tccctagctt gagtgctata aaatcttgct ttttcaatct tttctttatt ttttcctata
     8641 agcatacctc cacctgaagt ggtgataatt ttattgccat tataagaata agctccaaat
     8701 tctccaaaag ttcctaaagc tttattctta taaaaacttc ctaaagcttc agcagcatct
     8761 tcgattaaaa caatttcatt ttctttgcaa atttcaacaa tttcatccat tttagccgca
     8821 ttgccataaa gatgagttaa aatcaatgct tttggttttt tttcacattc tttaatagca
     8881 agctttaata aatctacatc gatattataa gtttcatcac aatctataaa tacaggtttt
     8941 gctttaagat aacaaatagg tgctactgaa gcgataaaag taaaagaaga agccaaaaca
     9001 atatcatctt gttttacccc tgccaccctt aaagctaaat gcaaagccgc tgtggctgaa
     9061 tttaaagcta aggcattttc acttttactg taagccttga cactttgttc aaagcgattt
     9121 acaaattcac ccaaaggtgc tatataattg cttttgaaaa cttcttctat gtattttaat
     9181 tcattaccac ccatatgcgg aggagaaaga aaaaatctca tgatttatcc tttgtgtaaa
     9241 acaaaatttt tataaattga ctctatttta cctaaaaaaa tttacaaaga ttcaaatatt
     9301 taaattcttt ttatagtcaa agcttgtttt cataccaatt tttaagcttt tctaagtctt
     9361 cttttttata aatactttca aagcatttaa ggagtatttt attttttgtt ttgataacaa
     9421 aacaaacttc aacttgattt aaaaatttca ttttttctat tttaacaatt tccaaatctt
     9481 ctcgttttat aaaatacata taaaaaagat taaatttact aactatataa attccatttt
     9541 cacaaaccat tgctaaattt ataacatata tcaacaataa taacatacct gttatcacag
     9601 aagaaactga tacttgcaaa ctccaaagtg tttttaaatt ttcattttct aattcaaaga
     9661 aaaaaagaag ttgataaaaa ccttcaaaat tataccaaat tcctattaat ccacccaaaa
     9721 aagcagcaat acctgtatat tttataatcc tactattttt agaatttaca tttgctttaa
     9781 gactaaaaag ttttttgtgt tttaaagaat ttttcaaagg aaatatgtag catattagac
     9841 atatggttag taaattaatg acaatccacc ccaaaggcga aggatttact atatagtgaa
     9901 caacaagatt gttattaaaa tgcaatttac atcctttttg caggtactcc cacaaaaaca
     9961 cctttttcat cttgattttt aactaaagtt gctccaccac ctaaaatact atcatctgcc
    10021 aaacttaaat taggcaaaac acaagaatta atccctaaaa aacaattttt accaattttt
    10081 acattacccg cacatttagc tcccacactc acatgagaaa attcccctat cacacattca
    10141 tgctcaatta cgcttgaagt atttaaaatc acaccttttt ctattttagc tttagcgtta
    10201 atcactacat aaggcatgat taaaattcct gcattttctt ccacgattgc gctaggactt
    10261 ataagcgcgc ttttatggat aagattgaca attttaaagc cattttctga aattttttga
    10321 taaatctttt ttcgaatttc attgtttcct atggctataa aaaaatcata tttaggtaag
    10381 gtactttcaa atttcattcc tttaaaatca tctaaaaaaa tacattcttt ataacccata
    10441 tttttagcca catcttcaca aacaagccca tgaccactag caccataaat ataaattttt
    10501 tcagttcttg ccattaaatt tctctgttgt aacatggcct tctttgctta ccccacttcg
    10561 ttttaaaacc tttaaagctg ttaaaaacat gatttttaaa tcaagcaaaa aagaaatatt
    10621 tttcacataa tacacatcaa gttcgaattt tttctgccaa gaaatagcat ttctaccatt
    10681 tacctgcgcc catcctgtta tacctggacg cactttatga cgcaattttt gctctttatt
    10741 gtaaagaggc aaatactcaa ccaaaagagg tctaggtcca acaaaactca tatccccttt
    10801 taaaacatta aaaagttgca aaagctcatc caaacttaag cttctaacga tttttccaaa
    10861 agctttcaaa cgcaattcat cgcttaataa ctcacccttt tcatctcttt catcgctcat
    10921 ggttttaaat ttataaattt taaaaatttt ttcatctaac ccgggacgat tttgggtaaa
    10981 aatcacactt ccttgagtga tttttaaaag taaagcagtg attaaaatca ccggagaaaa
    11041 aagcactaaa agcactaaag ataaaataaa atcaaaaatt cttttaaaaa ctttttcata
    11101 cattcttaat taccctatca taaagtttta aataacgctg tgcgattata ttttcatcgt
    11161 attgtaaagc atcttgggcg gcatttttag ctaaatttaa tcttaatttt tcatcttcta
    11221 ataaaagtga aattttttcg cttaaatctt tagcattttt tgtttttgcc caaagtccat
    11281 cataagcatt agaaatagcc tccacacaac cttcacaatc actcaccact atagccttac
    11341 cgcaagcttt tgcctccaaa acacttacag gaaagccttc tttatagctt ggcaaaacaa
    11401 aaatatcaca attttgcaaa agctcgacta tatcacttct agcacccaaa taatgcaccg
    11461 cgccagagtt taaaaactcc aaacttgcac aagaaggatt ttcatctctt ccaccaacta
    11521 aaacaaaatt tgctttgtct tttagcatag tagcactttc ataaaattct tttacaccct
    11581 tatgccataa agctcttgct atcataagca caatgggttt tttatctatg tttaaatttt
    11641 tccaaaaaag ctcttttttt tccgattcta cataaatagg aaaaaatttt tttaaattga
    11701 tccctacaga ttttatcacg caaattttat tttctttaag tcctaaattc cgcataaact
    11761 cagcattact ttcattgaca aaaataaatt ggtgtgcaaa tttaaaactt aatttataaa
    11821 gactattaat aacaaaacgc actaaatttg ccttaaaacc ttgatctata taaaaagatc
    11881 ccaagccttc tactaaggca aaacgataag gaatttttgc ccattttgct gctaaaattc
    11941 caaaagtatt gcttttgtgt gccgcacttt gaataaaatc aagatttaaa tttttcaaaa
    12001 ccttagcaag ataaaaaaaa ttctttaaaa ccacaaaagg atttaaacta gctcttgaaa
    12061 actcataaac aattactttt aagccaagat ctctaagttt ttgcgtgtat tcatcttgcg
    12121 gcactataac aaaaacttcg tcttttctat cttttaacgc ttttataata ggcattctaa
    12181 aatgataaat actcgctcct gcatgtgata aaaatcctat tctcattttc aacccttaaa
    12241 ttttaagttt aaaaacttta gcatctctag aattaatcac caagtcaaat aaattcttat
    12301 cataatttcc caaaaaaaac atttgcacat aagcactatt aaacatggtt ttatccatta
    12361 aaataaattg tgcgtaagga atagcactat cctttaaata aaaaatataa aactgagcct
    12421 tatcatcgat tggagtgatt ttgtattcac cttgtttaat agaattaatc tctacgatac
    12481 tatttacaga aaccacatta tcacctattt taaaacttct aaaatcatcg cttaaaacca
    12541 ctccgttgct aagataaatt tctccatttt taacatcaag tggataagct gtgctaaagg
    12601 taaaaggttt atccaaaact cctgtatcta aattaataaa agaaaaacta gccaccgtag
    12661 aaaaaatcaa agacattcta gcgggcatat aaagataaat atcacgagtt tttggtgtat
    12721 cgattttaaa atcaggtttt gataatgaag ctagaaataa atccacattg ctttgattat
    12781 aatctttcat catggcttgt aaaatgtctg attttaaaat atcattttgc ggagcataaa
    12841 agcttttttc tgtatattct acactaagtc ttgccatatt agctgcagct tgttcatctt
    12901 tacttaaaga aaaagaaggg aaaaaattat ccttacctaa atgctttcca ccatctacta
    12961 aagttttcac atcgctataa taacgcacag gataaccata atcccaccaa gttaccacat
    13021 aatcttctct attggctata ttttttaatt gatttaataa tgatgcttca ttttgagaaa
    13081 aaactgttgg cgctttatag ttgtaaatat ggataaatac tggagccaaa gtcaaaatag
    13141 ttgcaaaaac aatacaaaca tttgaagtta attggctata ttttttaacc aatatagcct
    13201 taaactcgct caataaaaaa ccaaatccta aagccattac aggtacagaa taaatggtaa
    13261 atctaagtcc tccttttaag gctaaaaacc caagcaccaa tataggtaaa gccataatca
    13321 tacttttatg ttttctcaaa agccatacaa aaccaaacaa agaaaacaag aaaacaattt
    13381 cactaccact aattcttcgc ataaattcgc taaaatctac attttcaact tcttgtatgg
    13441 tttgattaac attaaaatac ataaagccct gtgttaaatt cgcactttca tcgcttctaa
    13501 aaatataaaa tttaagctga taaagtatgg gatcaacccc accacttaaa atcaaaaata
    13561 tcaaagttgc actacctaaa attcctataa tcataaaatt taagcgtttt tgctctaaag
    13621 caaataaagc aaaaagtatt actataatgg cactttgata aaaccatgct atatttgaaa
    13681 gagtaagaga agacaaaatc acagctatat aaaaaatctt ttcttttcta tgaaaaataa
    13741 gtgtataaat taaaaaaagt ccaattaaag ctacatttaa agtataactt gaaggatacc
    13801 accaaagata aattcctata aataatggca aggcaatcaa tgaaaaaaag tcttttttta
    13861 aaatcattct taccataaaa aataaaataa acataggtaa aacaattacc agcatatccg
    13921 tatcataata cccactcata gtgcgattat aataactgtt tgctacactt gctaaaagag
    13981 cagctacaaa gcccattaaa gggcgtttgt attcattagc tagtaaaata ataggaatca
    14041 ccaccaaaga agataaaaaa gtactcatat ataaaatgat actttcaaaa gaaaaaggtg
    14101 tgattttata aagccaataa gtaagcgtag ataaagaaga tccataataa ctcaaatcat
    14161 taggctgatg aaaacctgct atcatatctc ttgcgccctc agcaaaagca tagccatcgt
    14221 ttgaaatgat cattaattga ttattgaaaa aatactcgtt aaactcactt gcccaccaaa
    14281 cccaataaaa cctgcaaaat acactaaaaa cataagctaa tacaatcatc gcaaacaaaa
    14341 ctaaataagg gttttttaaa tactcttttt tcaacatctt ttatcctaat aaatatttca
    14401 aagcatcgcg tgcaattttt actttatcaa aggctttagc cctagtttta gctttgtttt
    14461 tatacgcttt tcttaattta tcgtcttcaa gcatagtttt taaaccctga aacatagagt
    14521 tttcattatc tacttctact aaaagtccaa attcatcatc gccaaaaagc tctcttgcac
    14581 cacttttatg atcagtgcaa accaccgcac aagaacaagc caaactttcg attaaaacat
    14641 ttgaaaaacc ttcaaacaca gaagcaaaag caaaaaattc gcatttagcc atgtatttat
    14701 aaggattatt atcaaatcct aaaagcaaaa ccttttcttc caaatttaat tctttaatca
    14761 aagctaaaag ctcatcctta agcacacctt cacctaaaat cacaagcttt aaatctgttt
    14821 tcaatctcgc ataagcacga attaataaag catgattttt acctttatca agcctgccta
    14881 cacttaaaat aaatttatct tttaaagcta tgtcttcaag ggctttttgc cctatgtttt
    14941 ctaaatcgat ggcattgtat aaaatttcac atttttttgg acttatacta aaattttgca
    15001 ctaaatcttc taaatttccc ttagaattag gcaagattaa atcagctttt gggtaaagca
    15061 aagaaattaa aaatttattt accaaagaat taaaattatt tttcatatac atcacacttg
    15121 gcgtagtgca ttcattgatc acaaggcgag ttttgtttcc aaacattctt gccattaaag
    15181 ctatataatt aggtcgattt aaaaaaacaa attctgtatc aatacctaaa tttctgcaaa
    15241 gttttttgta ttttaaagcc aaaaaaggta gttttaaaaa tttcaaaata ggattttcac
    15301 taggttttga acattctaaa aaatgaattt gacactctgg aatttcataa gaaattttat
    15361 cattcatcaa gatcaaatgc acttcaaatt tcaaacttaa aataggcaat aaagtcgcca
    15421 caactctttc agcaccacca cttcctaaag aataaataaa aatgcctaat ttttgcataa
    15481 agccacccga atttttgata atttttcaat catattattt ggaattatac ttaaaatgag
    15541 taatatcaaa gcaggagcgt tgatttttat acttaggctt ttaaacaaac atttataaag
    15601 ggctttataa ttttttgcaa gttttgcata ataagctgcc attttataat aactcgcaca
    15661 agttttttta taatctttat ccttactcat tctaagttca ttttctaaaa ttttagcaag
    15721 ctctaaatat cccaaataca ccctataagc atttttactc gcccctaaag tcacgctatc
    15781 ttgcctaaaa attctataaa tcctaaaagc cttatggata taaaaacttt tttctttgta
    15841 taaatttacc caaagcgtgg cttcattgcc ataaaattct tcattaaaac gcttattttc
    15901 aagtagggat tttttaaaaa cagaaaaaaa ctctccgcta aatttagcca ttaaaaaatc
    15961 ttttttagaa atttcactat ctttttccaa gcccttgccg ctaaattcct tgcttaaatt
    16021 tccttctttt tctatcaaac aatttccaaa aacatgagca taaccctcat ttgctttttg
    16081 catcaaggta cttaaagccc cggataaaag ctcatcatca tcatctaaaa aagttacaaa
    16141 ctcgccactt gcttgatcta agccattgtt tttattgcca tttggacctt gtttgtaatt
    16201 ttgatttaaa aaatacttaa tgcgatcatc atctttttgt aaattttgca ccacactttt
    16261 agtatcatcg ctagaattat catcgcttac aataatttct aaatctttaa aatcttgatt
    16321 ttgtatgctt ttaatagcct tttctaacaa aacttgacga ttaaaagttg gtactataac
    16381 agaaagttta ggcattttta acctcggcta taagcttaag ccattcttct ttgatatgag
    16441 aaatttcaaa gtctttacac ctttgtttgg cattatttac aagttctttt ctaaaatttt
    16501 catcatttaa aacaagttca agttttttag caagtgctat ttcatcatca caacctacca
    16561 aaagcccatc atgattatct ttgattaaat ccttagcacc attataataa gaacttgaaa
    16621 ttctacaaac ctcaaaatac aaactttcaa ttaaaaccgt tggcaaaccc tctacaaaag
    16681 aacaaaggca aagcactttt gctttttcat aaagagcctt gacattttca acgcgtccta
    16741 aaaaatcaac ttttattcct aaagatttta ccttatattc aagttcttgt cttaactgtc
    16801 catctcctgc tataacaaat ttataatttt cttgtaaatt tttatccaaa tgcgctatag
    16861 cttttaaaaa cattacaggg tttttgttgt gatctaaacg ccctataaaa agaaccaaat
    16921 tttccttttc aaaactagaa tcaaaagaaa tttcatcgct aaaatgacaa gggtttaata
    16981 aaagcttaac cctttttaca aatctttcat aatacacctt atcactgctt ccaagcacac
    17041 ttaaagcatc acaaaaagga tagcttaccc ttcttaaaaa acgccaaatt ttaggtttta
    17101 aatacgcttc attgctatgc tcacttataa tgagtggagt tttaagccct attttcgcag
    17161 caatacaagc aatattagtc gtatccaaaa aagaaataaa aacatcagac ttactttctt
    17221 tcaaagcctt tcttaaagca aaaaatttct taaaacgact tgcgatttta tgataaagcg
    17281 tgtcaaatct aaattgttcc aaacttgtaa ctttaacttc attttcaagc ttataaaaag
    17341 attctcctgc atgaaattta ataatactta cttcatgctc tttgcaaagt gcattagcta
    17401 aggttactaa agcacgctca gcacctcctg aatttaaagt tgcgataata aagcttattt
    17461 tcatcatttc tcctctttaa gcttaccgtg ttctaaacga taaaccttat cacattgtgt
    17521 tatcgtagaa aggcgatgtg cgataataat catggtttta tctttagaaa ttttataaat
    17581 ttcatccata atttttgctt cactttgagt atcaagcgca gaagttgctt catcaagcac
    17641 taacatttca ggctctaaat ataaagctct tgctatagct atgcgttgtt tttgtccccc
    17701 gcttaaatta ctccccccat cgcccacttt tgtttgcact ccttgaggta aattttttat
    17761 aaaatgctct aaatttgctt gtttgataac cctattaagt ttttcttcat caaccgcatc
    17821 tccaaaagtg atatttttag ctatactgtc attaaaaaga tagatatttt gcgggatata
    17881 gcctattttt tggcgataat tttttgtatt atttgcattt aattcttgct catcaattaa
    17941 aatttgccct tcttttggtt ttaaaagtcc tatgataaga tctactaagg tactttttcc
    18001 acaaccactc tcccctataa aagcgatttt ttcgcctttt ttaatattta agttaagatt
    18061 tttaaataaa tatttttttc cctcataacc aaagctaaga ttgcaaattt taagctcttg
    18121 attaaagctt aatttttcct cgcccaaatt ttcttcttct tgtcttaaat tttgataaat
    18181 aatatccaaa gaagaatgat aataaagcaa atcatgataa cttgtaataa tacgatttgc
    18241 acttggcatt aagcgataaa gcgctaaaac aaaaatagaa atcgtggata aaatacctga
    18301 aatatcactt tcatttttca aaaccaaaaa taccacgata aaaacaagta cgcaaaagcc
    18361 tattccttca agataaattc taggcaccgc agctacgctt tcgttggtaa tatttgcttt
    18421 agaaaaagct tcactttgcg ctttaaaaag acttaatact ccatcttctt tggttttaag
    18481 cttaataaat ttgaaattat ttaaatttgt atttaaaatt tcaaagaaat ttttcatcgc
    18541 ttcttcgcgt cttactcctg cttttttaat gatagggctt aaaattttca ctaaaataaa
    18601 ggcatttaac accataaaaa tacttaaaaa caaagtgatt ttataattaa tcaaaagcat
    18661 taaagcataa agcaaaagta ctacaaaaat ttcactcatc aaaagtaaaa atgatgaaat
    18721 catagtgctt agattataaa cttcccctgt aatggacttt aaaatttcag attgattttt
    18781 ttgagtaaat ttttcataat taatatttaa aaatttagaa aaaaccttat aagcgatcgc
    18841 atgataacgc cctttagaaa atcttgccaa aagatgaaaa taatacgcat ttaacaaagc
    18901 tctaaacaca taaaaaacaa taagccccac tccaaaataa acaatgattt caaaaacagg
    18961 gatattaaga tattctttta ggctgattaa atatttatta cgatcaaaat aagaaaaatc
    19021 actagccaaa gtgataaaag gcattaccaa agaaattgca aaagtttcta taaaagaaat
    19081 aaatactgaa aaaacaagca agaaaaataa aaaattttta tcttccttac ttaaaataaa
    19141 aaaaagtttt tttaacactg tttttcccaa tcaaaagcag atttacaaat aagctctaaa
    19201 tcatcatatt taggctgcca agaagtaaga tttctgattt tacttgcatc agaaatcaat
    19261 acactaggat cacccgcacg gcgtggggca agttctactt taaaatccac tccgctaact
    19321 tttttcatcg cttcaatcac ttcttttacg ctaaaaccat gtccataacc tacattaaaa
    19381 acattgcttt cattctcttt taaataatcc aaagccgcta aatgtgcact tgaaatatca
    19441 tctacatgga taaaatctct tatgcaagta ccatcttttg tatcataatc atcgccaaat
    19501 atgaaaagtt tatcacgttt tcctgcggca cattcagctg caacttttat aagcaaagtc
    19561 gcttttggat agcgttgtcc taaagtataa tccatacaag cacctgcaac attaaaatat
    19621 cttaaaatac aatgcttaaa ttcaggattt gccatacttg catcacgcaa aacttcttca
    19681 ctcataagct tactacgccc ataaggatta ataggtgcta aaggacttgt ttcgctcaca
    19741 acgggagttt gtggttcgcc ataagtggcc gccgttgaag aaaatataaa tttattcact
    19801 ccagtttgca aacaagtttc gatgagattt gtcgtattaa cagtgttgtt catataatat
    19861 tttaaaggat tttgcatact ttcaaaaact tcaatgcttg ctgcaaaatg cacaatagcg
    19921 tcaaattttt ctctctcaaa caatgctttt acgccttgaa aatcacttaa atcttgttcg
    19981 aaaaatttaa aagctcttgt tttttgcaaa tcttctattg cgattttaga acccttagaa
    20041 agattatcta aaacacaaat ttcatgatct gtttttaaaa attgtcttaa agtatgagaa
    20101 cctatataac ctgcaccacc gctaataaga attttcatca tcattccttt ttttaaaaat
    20161 g
//
LOCUS       DAPIVO010000032        20034 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.032, whole genome shotgun sequence.
ACCESSION   DAPIVO010000032 DAPIVO010000000
VERSION     DAPIVO010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20034)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20034)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20034
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.032"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(34..291)
                     /locus_tag="RJ239_001006"
     CDS             complement(34..291)
                     /locus_tag="RJ239_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002844160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331134.1"
                     /translation="MCKIIKYLDYTKLNTLEKLYFDLTIMLIVTFLSFLFLVFEFFIY
                     ENIAVFFQDCFLMSVIFIIGITGLFHTCKGLRKYKEILKKV"
     gene            783..1001
                     /locus_tag="RJ239_001007"
     CDS             783..1001
                     /locus_tag="RJ239_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002818418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HDV7331135.1"
                     /translation="MLLNIIIEKDQDGYFARILELEGCVSQGNTYEETLANIKEAGEL
                     YLESLANEEKRIIENKTTSIIPMVLANA"
     gene            994..1197
                     /locus_tag="RJ239_001008"
     CDS             994..1197
                     /locus_tag="RJ239_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HDV7331136.1"
                     /translation="MPELPRMTAKEAEKLLLQNNFLIDRQKGSHRIYKKGLYRMVIPH
                     HIGEILHPKIIKQLFEIIEVAKD"
     gene            1201..2994
                     /locus_tag="RJ239_001009"
     CDS             1201..2994
                     /locus_tag="RJ239_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002835057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDV7331137.1"
                     /translation="MPKRNTIDTITLGLFSDEDVSIICEDTIKLERGSVAVLSGNSEV
                     GKSFLALKVCANAINDGLKPFFWSVEDKNKAILGRIKNIESFYSFNTAELEFSNELPK
                     INKEPINCLKEELNELADCDLIVLDTFSAFFSTLGFKDQNNQNDVQNFFNILTDIAKS
                     NNQAILLLHHLDKKGESLMGSSVIINAPRLVYKLSFEKGEDKNSTTYRLLEVLKDNNN
                     INAGEFQKTIKVLQNSSIDEPSIVNLRANSIDSNTLEIINKKDISAVSVNELAKGYVT
                     MNENRGVFYLSSRKLTDTNFYKVFKENDNKIDFKMTGANDSSYVISLKNSLLTQTHRN
                     ILDALFLYIKKNVDTSVIKKYQENFWDMEVRLEPYKFLKQYLNKNSNNYSWLKQKFTE
                     ISRFAYDLAFTQNVEDKDKKTITQRDKGILMFDSVERITKENGTIVSVFVLTVRREYI
                     KKLETESTLSYDDDLSKILINLNSLVAQDLIRFLTSFPDKKILSYSEFCEIKAYRFYK
                     ESSIISKQKKEIVKLKDKLIEFGINVYGKGVEFANYDDEFFHNKYKNENDLFFIYESN
                     NRVKRYIKRSDPMNQLNTKSNKFLLQKSLFD"
     gene            complement(3117..3731)
                     /locus_tag="RJ239_001010"
     CDS             complement(3117..3731)
                     /locus_tag="RJ239_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HDV7331138.1"
                     /translation="MNIAYIRVSTNKQELDSQKLEIMEYCHKNNIHLDEILEVKISST
                     KSQEKRKIKDLKQKLKAGDLLIATELSRLGRSMLEIINLVLEFNSNNIKFLFLRQMEL
                     SNFNNPASKLILSVYAYLAENERDLISQRTKAGLENARASGKKLGRPKGSLNSIYDKD
                     IDKIQTLLDKDLSIKSIWKLLYKDNGKSYDGLLWFIKKRKLKGS"
     gene            complement(3728..4105)
                     /locus_tag="RJ239_001011"
     CDS             complement(3728..4105)
                     /locus_tag="RJ239_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002801138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vapd"
                     /protein_id="HDV7331139.1"
                     /translation="MGINRKAINFDLSTKSLEKYFKDTREPYSLIKKFMLENGFEHRQ
                     YSGYTSKEPINERRVIRIVNKLTKKFTWLGECVKEFDITEIGEQYSLKETIQDLCAKD
                     FHQKLKEFTEKTPKNQKLKDLER"
     gene            complement(4096..4419)
                     /locus_tag="RJ239_001012"
     CDS             complement(4096..4419)
                     /locus_tag="RJ239_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331140.1"
                     /translation="MAYPLLGTRIVLDEEKILKEGKYNLEDMYKMIDEYAKESGMIKI
                     NKETYHCKGDKYDLGCMTLFIYKYLIDSEWFTKNAKEWIWISEKEGNSDLISASKAEG
                     EGIWE"
     gene            4590..4853
                     /locus_tag="RJ239_001013"
     CDS             4590..4853
                     /locus_tag="RJ239_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002828964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbC/VirB2 family protein"
                     /protein_id="HDV7331141.1"
                     /translation="MKKRLLSLILISPIFAFGAGGIDKVNTFMQNLSIALYALGGVLL
                     TIALMWGASKIMYQGQTLREVAPVFIGGVIFGSASAIAGYIIT"
     gene            4866..7634
                     /locus_tag="RJ239_001014"
     CDS             4866..7634
                     /locus_tag="RJ239_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirB4 family type IV secretion/conjugal transfer
                     ATPase"
                     /protein_id="HDV7331142.1"
                     /translation="MEKNPLFKGLTRPPMIFGVPMTPFVIAMGCIILIAFYSQNIFLV
                     GFSIPVFFIMKAMTKRDDFIFRLMFLKMRFFSNPASKNYHKVKTYSTNSYRQMPPNSN
                     FPKISVFGLNAEPSFEKLIPFSSLINDSVVITKDYFLMTTWEIGGISFEAEEDDELDI
                     KNDLLNMLFKSFANESVSFYFHNCRYSIEDKLTSKFNNAFLEEIDRKYYESFKQGTLR
                     KNSLYLTLIFNPLKVKIEKTTFMKSSFENKRKTISVFLAKFSEFADRLEANIKDFNPK
                     RLKTYSKDDKTYSKQLEFYNYLLGGKFNPIRVLPSPIEQYLNGNLQNIQFGHDTIQFN
                     QNDSTKKFARCIEIKDYTNETFAGILDILMYLDVEYTVTQSFSPIPRVDAKSAISKQK
                     KQLIATEDDGFSQVEQIDEALDQLTNGEISFGKYHFSILVYGNTIKECKDNTNEVVTK
                     MNELGFGVTLATIALPATFFSQLPSNFAIRPRINLISSINYSSLIALHNFSMGKRDKN
                     CWGDAVSILKTPNKQPYYFNFHQSSGANKNDFGKFFLANTLILGQSSGGKTVFMNFIV
                     DQMMKYASKDTFPDDIPEDKRKFTAIYLDKDKGALGNILCAGGRYISIENGKPTGFNP
                     FMVESTQENIRQLQSLMKLLVTRNNEILTTREEEMLNNAVNSLMKGFEKEERKYPISL
                     LLENLTENVDDDNSLKSRLALFKKGKQFGWVFDNEYDNLDFPDDINLFGIDGTEFLDD
                     KDVSGILSYYILWRVMSLADGRRLCIDIDEAWKWLENEIVQEEVKNKFKTIRKQNGFL
                     RLATQSLEDFLKLKNAATLIEQSSTMVFLSNPKAKEEEYVKGVGLSYDEYMIIKGFNP
                     VKRQFLIKRQDEKVICTLDLSPLGNENLKILSTETAYIDVIEKIFSQENKSLDEKVLE
                     LKEIYKNS"
     gene            7645..8211
                     /locus_tag="RJ239_001015"
     CDS             7645..8211
                     /locus_tag="RJ239_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002869250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HDV7331143.1"
                     /translation="MSNKVIINKQEVQFDTQNNQIFCTSLDVAKVFGKRHFHVLRDIE
                     NILNDLREIGTSQDLSNFGETYRNTEIRGFGKVKGKTRKDRCYNLTRDGFSLLAMGFT
                     GKKALQFKIAFINAFNEMEKLLQKEIKSPNKYLTDLMELIYPNLPQNDYKVSVIITDN
                     PYSKEAKNVFSLNYLVDNRTPKDPKKLQ"
     gene            8208..8873
                     /locus_tag="RJ239_001016"
     CDS             8208..8873
                     /locus_tag="RJ239_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002842869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331144.1"
                     /translation="MSDKELQKEILALENDVKQLEATIDVIKQRITHLKDIAWDRQSK
                     KESSQMYKVLKEDKTHTRVKSNVGDIKVDKDFMDKEIKKHLDNPNLRGMVTTQEMLSF
                     PKVAKGVEANNEARGYTWQVKANDGNTLVYGSRKYETNNEKIHRLATSHSKTEKNERQ
                     AEVGGRSHPHHPIFNDFNFRKSAENIISQQNKSTNDFKAKLEEFSTKKTNAIESINKE
                     FKR"
     gene            8907..9332
                     /locus_tag="RJ239_001017"
     CDS             8907..9332
                     /locus_tag="RJ239_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDV7331145.1"
                     /translation="MNNVNLIGYLGKDFEVGTTNSGRVYAKNSLAITKRWKNERGNEE
                     SSTTWIPIVLFGKSAESASTHIKKGSQFACSGELSSNQYQDEDGNTRTMLTVIVSKFY
                     WLGKKDKDDNGTQNPQVPPKEPNIDYENTNIESEETQVF"
     gene            9354..9623
                     /locus_tag="RJ239_001018"
     CDS             9354..9623
                     /locus_tag="RJ239_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006803305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331146.1"
                     /translation="MKNLSVEELAQELETSNHEKLIKALFLFEKNSSMEDLNSDQIEI
                     ILDEVYEFYINHKSISSFLQEDINQALDKAIDKELCKKQEKSFER"
     gene            9627..10598
                     /locus_tag="RJ239_001019"
     CDS             9627..10598
                     /locus_tag="RJ239_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002864048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein"
                     /protein_id="HDV7331147.1"
                     /translation="MKKNIFGVNKAIGKSHPHENGARLISLDYNYTKEYNYNYEICVT
                     QFNHLFSEVKFSHRVAALWLTPQNYIQKFKKSILILTSLLVLPNLAFSAGIPVVDVTA
                     NQQMATQNAKQVAEWAKDASRWTETVAHYQKQIQAYKDELLSKTGIRDSVTFLKDIKQ
                     IYSDFAEVGQNIQSFYNDVLRDPQKFLSDKGNEIFGKYTSFDRCNFDFLSQSEKNICK
                     MNLITYAAQVETYNQASKQMDTISQTLQKLQDKLVNSKDIKESTDVGNAIQLEVAKIQ
                     MVKNQVDLANASYENQRKIKEDMAMQEYSKSLQKPRESAMEFFKNNK"
     gene            10595..11593
                     /locus_tag="RJ239_001020"
     CDS             10595..11593
                     /locus_tag="RJ239_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein"
                     /protein_id="HDV7331148.1"
                     /translation="MNLDLFQTLGKSIQQIVDAIRQVGTNDKVAELSVLLSIIITLVI
                     MYKGYEVLMGRSQSPIRELTWDIVGKLVAITFALNLGGWLDLTISTMDGLYEWAGGGT
                     QMYKTLDEMYANTAQLTNIIWAKSSGVGGAILAIVAMLLCYVGFAIAVVPALTIFVVT
                     TFTQTLLVITAPIVFWLLVFKATKNVFTQWIGLLLSNTLVILLVGLFLGVFMEQISTW
                     IKYFAKVTQAGDEVLGTSIFFVIAALVLVIMIISAKLYAEKVANVSMEGAMGGVIGSV
                     LNPVGRLAGWAGGKVAGKTVNTAKAGGKLAAKGTLASAKGGYSFAKKMYERARNAG"
     gene            11583..11750
                     /locus_tag="RJ239_001021"
     CDS             11583..11750
                     /locus_tag="RJ239_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331149.1"
                     /translation="MQAKLIFILLLGVLFFSACSTKNQGKYDEFFNNQTGWIPVNTQN
                     KDLNKGTMDEK"
     gene            11740..12402
                     /locus_tag="RJ239_001022"
     CDS             11740..12402
                     /locus_tag="RJ239_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein"
                     /protein_id="HDV7331150.1"
                     /translation="MKNEFNTAIDYEASFRYLIEKSNKRAWLIAFISIFIAIISIIAV
                     VLLTPLKTIEPYVIRVDNTTGMVDILTMLDEKEIKANEALDKYFISTYVKAREGYYYD
                     LLNQDYLLTQLMSSEKVANEYRALYEGDNARDQILKNSNEVSVQILSIVLGESNGVKT
                     ATVRAIITTKNLTSKGTTQATKVITLSYDYILAKASEENRFLNPLGFKVLTYRIDDEV
                     AQ"
     gene            12399..13286
                     /gene="virB9"
                     /locus_tag="RJ239_001023"
     CDS             12399..13286
                     /gene="virB9"
                     /locus_tag="RJ239_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002834097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein VirB9"
                     /protein_id="HDV7331151.1"
                     /translation="MKKIILINLLLCSFIWALNIPKTSTFDKRIAYAIYNANDVFQIN
                     AKNGYVSVLEFGTDERIINTATGFAEGWDLIEKDNLLFIKPKAYKTQLVQQENNNIGE
                     SQASQEFVLDPNPHDWKTNLIVITNLNTYVFDLKLVNQNNNATYKLSFSYPKKDLKAA
                     KEFLEAQEQENIRRDLNKNTIPRNWDFYMKINKGSEDISPNFAYDDGVFTYLGFDNTK
                     TFPAVFMYDNGKESILNTHIKKDGNYEVLVIQKITKQILLRSGDKVVGIFNRGYAKNP
                     LDKTRETSNENIQREINKK"
     gene            13313..14488
                     /gene="virB10"
                     /locus_tag="RJ239_001024"
     CDS             13313..14488
                     /gene="virB10"
                     /locus_tag="RJ239_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein VirB10"
                     /protein_id="HDV7331152.1"
                     /translation="MQDKEQDNLDNDFENHTSDLHDQKNHLRKIQAYVIFAVGGLLLV
                     LILVYFLKSFLSSNTTTEEVQKEDNKDLAQSVKTKEFIPPPPQKTFDELIAQESPKPT
                     QDLILEPKPPKPRIVKGAGVTVVASSNNDGFGNNGTGNREEFGEKPNTVFEFGQNGSL
                     QNSNNLQGGSNGDFVGEVFTPTIAKVSEFDQNLLLPKGTYIGCALKTRLVSSIKGGIA
                     CIVSNDVYSANGNTLLIEKGSTITGTFNTGQMDDGMDRLFVIWQEIRTPNNIIIPVYS
                     GATDELGASGVQGWVDHHYLKRFGSAVLLSMIDDSLAILADQIAGKDNKNNYANYTEN
                     TRDSAKEIANTALEKMIDIKPTLYKNQGDLVGVYVNRDIDFSKVYKLTRKKNVNNAR"
     gene            14469..15461
                     /gene="virB11"
                     /locus_tag="RJ239_001025"
     CDS             14469..15461
                     /gene="virB11"
                     /locus_tag="RJ239_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-type DNA transfer ATPase VirB11"
                     /protein_id="HDV7331153.1"
                     /translation="MSITLDKYTQKFFGEFLKDDNINEICYNGDNKIWVQNSKGLWEC
                     IDTKLDFEQAGHFATASASFKKDKIDVSRPILSCILVGGERMQIVIPPATKSEHISIT
                     IRKPSKTRFKMEDHIKSGLFEDLNPDDKNKIKPSDEELIKLYEARDYQNFISKAVSYG
                     KNIIIAGETGSGKTTFMKTLIDFISLDDRIITIEDVEEIKFYEHKNFVQLFYPSEAKS
                     TDFLNSATLLKSCLRMKPDRILLAELRGAETYDFINVLASGHGGSITSCHAGSPEETF
                     TRLALMTLQNPQGQCVPFEIIQKTLKDLIDIVVHIHAHHGKRRISGIYFKEMER"
     gene            15462..17273
                     /locus_tag="RJ239_001026"
     CDS             15462..17273
                     /locus_tag="RJ239_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002822838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HDV7331154.1"
                     /translation="MQNNKSIQMIFLAIASFILTYLITPIVFFFLNKVKIMKAIEIYN
                     INFTLQAISNGYPKIWLSLGITFGICFVVFSVLVLSLKAKKSQFGEARFANFNEIKKM
                     NLFSDNGIIIGKYKGKILRFSGQQFVALGAPTRSGKGVGIVIPNLLEWRESAVVQDIK
                     QECFDYTSKYRKEILGQEVYLFNPFSRQTHRYNPLTYIDMSDKEHCDSQLMDLGNILY
                     PQDGDSTSKFFNGLAQNLFIGLCYLWRDLQLTDYGKEFQSAFDINVGEFNFYNILQLS
                     KGFSLKNEGKTLKGFDDTYNFLSYCEVLDEATIRRLETYFNINSDATKSGVMSSFNAP
                     LVPFESETLRLSTETSDFDLRDLRKKKMTIYIGITPDQLANAQFILNIFWSQLILLNT
                     KELPQSNKDLKYTCLMVMDEFTAPGRIPIYQSAISFMAGYWLRSLMIYQSNSQLETQP
                     PLGYGKEGAKTLLTNHACQIFYAPREQEDAEAISRILGNTTFKTKSRSINTGNNGGGS
                     HSISEASRALMLPQELREMPFENELITIDSGKPILCNKAFYYSDSYFMDKFKAVSKSL
                     STIRKIPSRKQLEDAILKGECKVKIQIIGENNDKKIA"
     gene            17254..17691
                     /locus_tag="RJ239_001027"
     CDS             17254..17691
                     /locus_tag="RJ239_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cag pathogenicity island protein"
                     /protein_id="HDV7331155.1"
                     /translation="MIKKSLDNLVIMALVFIMVGCSTAPKPKELDDNSALSINNSILE
                     KKYSFVPKDPYLSGFNWTYHIVVEKKTIDDDFIKNDLITKTFLLAHNSTKIILVGRKD
                     LIEQYKQYFEKNQVLAPIELQPVNPIERDFNKVNILFFNKTNF"
     gene            17703..18467
                     /locus_tag="RJ239_001028"
     CDS             17703..18467
                     /locus_tag="RJ239_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331156.1"
                     /translation="MKKILFPFCVFGVINSVNALDLQLLSGDTRTSCEVILCLASPVK
                     PPECASSLAKYFSIHFKKPWKTIQARKEFLNLCPIDTTNDPEMYKYKNDILVNLDGEC
                     STTALNQRIEKSKQPLKVEKICTGGGHNGSRECVEIKTYGFRINPELTNSCKLLASSK
                     YTDYHLKYTCDKKFYEQKDWERGYELKEVSQEIYNALPVSQREQGEKLTPISYGEFIK
                     LPANKRKQEGFGKYYRIDIAYYQKIIIKKDCWINEK"
     gene            18470..19267
                     /locus_tag="RJ239_001029"
     CDS             18470..19267
                     /locus_tag="RJ239_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331157.1"
                     /translation="MNEEINSNENNLFEIVNEDNSKNIAMQNYNELLEKFENLIKIII
                     AKINVGKQNAQNNTEDGIFKDLESNIIELDNTYLALISYFKNPPNDEEKEIINKTISI
                     KKTMEDFAKFANEIQKISLDDKLKQYNEQINKFCEIVEYKLSHNAKNYNTFLDHFVED
                     GKQKLNTFSEIFTKMTKNTKWYLIFFSFTSIGLGIALGILILLTYIKYSEYNNLKERV
                     STITQGLATISIDENSKGSFTLSFAKNKKTIFNENKNSIQITLQGGE"
     gene            19338..19958
                     /locus_tag="RJ239_001030"
     CDS             19338..19958
                     /locus_tag="RJ239_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002801287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331158.1"
                     /translation="MAFGKLVNDKIVIDTNNALNYKNKEGDIQQRKVDTALIDVIKEA
                     GQVAAMEHGAVLFSAKINDEWKNYFVNRDEKTHNIVLKPTNSQNRDDFIYINSNINEQ
                     GYFYYTINQKREAAKELIEGIGIIEHQNQDGTKSHYLETNVRLYNEELKQELKEKGNE
                     FIAVISNAGIRIVNEAEMKAQKQEQQIQQTQEIKEPEKTQNQEFGR"
BASE COUNT         7769 a         2625 c         3106 g         6534 t
ORIGIN      
        1 atattacaca aatcttgata aaagttttta tcattaaacc ttttttaaaa tctctttgta
       61 ttttcttaaa cctttacaag tatgaaataa acctgtgatt ccaataataa aaatcacaga
      121 cattaaaaaa caatcttgaa agaaaacagc aatattttca taaatgaaaa attcaaaaac
      181 aagaaataaa aaacttaaaa aagttacaat taacataatt gttaaatcaa aatacagctt
      241 ctctaaagtg ttaagtttag tataatctaa atatttaata attttacaca ttcttttacc
      301 tctgcttctt atgcttattt tctattaaaa cattatatca taatttctat ttctattagc
      361 aacactttct gtttggagtt ttttaaaata aaagttcaaa aattttaatt tttgatttac
      421 cttatttaat attatagaat ttaatgaatt taagaattta ggaattatta catttaagtc
      481 aattgttttt ttaaagttct tattttccat atattctttt cgtaaaaatg tcaaaaatta
      541 ttacatttaa gtcaaaaatt attacattta agtcaatttt atttgaaaat aagaggagta
      601 tttaataatt tttgttgact ttaatgtaag tgtatattac atttaagtca attttatttg
      661 aaaaaattct aaaattgcta cctattgaca tagatgtgat actttggtat aatttatttc
      721 gaagattaaa atatttggtt acatttaagt caatcttatc attttttaat acaaggaatt
      781 agatgctatt aaatattatt attgaaaaag atcaggatgg atattttgca cgcattctag
      841 agcttgaagg ttgcgtttcg caaggaaata cctatgaaga aactttagct aatataaaag
      901 aagctgggga gctttattta gaaagccttg caaatgaaga aaaaagaatt attgaaaaca
      961 aaacaacttc aattattcca atggttttag caaatgcctg aattgcctag aatgactgca
     1021 aaagaagcgg aaaagctttt attgcaaaat aattttttga ttgataggca aaaaggcagt
     1081 catagaatct ataaaaaagg actttataga atggttattc ctcatcatat tggagaaata
     1141 ttgcacccta aaatcataaa acaactattt gagatcatag aagtagcaaa ggattaaaaa
     1201 atgccaaaaa gaaatactat tgatactatt acactcggac tttttagtga tgaagatgtt
     1261 tctataatct gcgaagatac aattaaactg gaaaggggct ctgtagctgt attaagtggc
     1321 aatagtgaag taggcaagtc ttttttagct ttaaaggtat gtgctaatgc tattaatgat
     1381 ggcttaaaac cttttttttg gagtgtagaa gataaaaata aagcaatttt aggacgcata
     1441 aaaaatattg aaagttttta ttcttttaat actgcggaac ttgaattttc gaatgaactt
     1501 ccaaaaatca ataaagaacc tataaattgc ttaaaagaag aacttaatga gttagcagat
     1561 tgcgatttaa ttgttcttga tacctttagt gcatttttct caacattagg ctttaaagat
     1621 caaaacaatc aaaacgatgt gcaaaatttc tttaatattc taacagatat agcaaaatca
     1681 aataatcaag ctatcttatt acttcatcac ttagacaaaa aaggcgaaag tcttatgggt
     1741 agctctgtta ttatcaatgc tcctagactt gtttataaac tttcgttcga aaagggagaa
     1801 gataaaaatt ctaccaccta tcgcttgctt gaggtgctaa aggataataa taatatcaat
     1861 gctggagaat ttcaaaaaac gattaaagta ttgcaaaatt ctagtattga tgagccttca
     1921 attgtaaatc ttagagctaa cagcattgat tctaatactt tagagattat caataaaaaa
     1981 gatatttctg ctgtaagtgt taatgaatta gcaaaaggct atgtaacaat gaatgaaaat
     2041 agaggtgttt tttatttaag ctcacgaaag cttacagaca ctaattttta taaagtattt
     2101 aaagaaaatg ataataaaat agattttaaa atgacaggtg cgaatgactc atcatatgtc
     2161 ataagtttaa agaactcttt gcttacgcaa acgcatagga atattttaga tgctttattt
     2221 ttatatatca aaaaaaatgt ggatacaagt gttattaaaa aatatcaaga aaatttttgg
     2281 gatatggaag taagattaga gccttataaa ttcttgaaac aatatcttaa taaaaattct
     2341 aataattact cttggttgaa acaaaaattt acagaaatct ctcgttttgc gtatgatttg
     2401 gctttcactc aaaatgtaga agataaagat aaaaaaacaa tcactcaaag agataaaggt
     2461 attttaatgt ttgactctgt agagcgtatc acaaaagaaa atggaacaat tgtatctgta
     2521 ttcgtgctaa cagttcgtag agaatatatt aaaaaactcg aaacagaatc taccctttct
     2581 tatgatgatg atttatccaa aattcttatt aatttaaatt ctttggtggc acaagatttg
     2641 attagatttt taacaagttt tcctgataag aaaattctta gttatagtga gttttgtgaa
     2701 attaaagctt atagatttta taaagaaagt tctattattt cgaaacaaaa gaaagagatt
     2761 gttaaattaa aagataaact tatagaattt ggaattaatg tttatggcaa aggcgtagaa
     2821 tttgctaatt atgatgatga attttttcat aataagtata aaaatgaaaa tgatttattt
     2881 ttcatctatg aaagcaataa tagagtaaaa agatatatta agcgtagtga tccaatgaat
     2941 caattaaaca ccaaaagcaa taaatttctt ttgcaaaaat ctttatttga ttaacattta
     3001 caatcaagga gtgttgtatg aatgaatggg aattagaaag acaaagacaa ataagataga
     3061 caaattgagc gttttatttt attacaaaat tttttatatt tttcttaaat gaaaatttag
     3121 cttcctttta attttcgttt tttgataaac cacaatagac catcatagct ttttccatta
     3181 tctttgtata ataacttcca aatactttta atagataaat ctttatcaag caaggtttgt
     3241 attttatcta tatccttatc ataaatacta tttaatgagc ctttagggcg tcccagtttt
     3301 tttccactag ctctagcatt ttctagtcct gctttagttc tttgacttat caaatctctt
     3361 tcattttctg ctaagtaagc ataaaccgat aagattaatt tagaagcagg attattaaaa
     3421 ttactaagtt ccatttgtct taaaaataag aatttaatat tattagaatt aaattcaagc
     3481 actaaattaa ttatttctaa catacttcta ccaagtcttg aaagttctgt tgctattaat
     3541 aaatcacctg cttttagttt ttgttttaaa tccttgattt ttcttttctc ttgagatttt
     3601 gtagaactta tttttacttc caaaatttca tccaaatgaa tattgttttt atgacaatat
     3661 tccataattt ctaacttttg agagtctaat tcttgtttat ttgttgatac tcttatgtat
     3721 gctatattca tcgttctaaa tcttttaact tttgattttt tggtgttttt tcagtaaatt
     3781 ctttaagttt ttgatgaaaa tctttagcac ataagtcttg tatagtctct tttaagctat
     3841 actgctctcc tatttcagta atatcaaact ctttaacaca ttcgccaagc caagtaaatt
     3901 ttttagtgag cttattaact attcttataa ctcgtctttc atttattggc tcttttgaag
     3961 tataacctga atattgtcta tgctcgaaac cattttcaag cataaatttt ttaatcaaag
     4021 aataaggttc tcttgtatct ttgaaatatt tttcaagact ttttgtagat aaatcaaaat
     4081 taattgcttt gcgatttatt cccaaattcc ttctccttca gctttacttg cagaaattaa
     4141 atcgctattt ccttcttttt cactaatcca aatccattct tttgcatttt ttgtaaacca
     4201 ttcagaatca atcaaatatt tatatataaa taaagtcata caacctaaat catacttatc
     4261 ccctttacaa tgataagttt ctttattaat ttttatcatt cctgattctt tagcatattc
     4321 atctatcatt ttatacatat cttctaaatt atatttgcct tcttttaaaa tcttttcttc
     4381 atctaatact attcttgtac ctaaaagtgg gtatgccatt tttttatcct ttcatcaaaa
     4441 acctaacaaa ttctagtaaa aaatagctaa tacttaaata aaagcttttg aataatatta
     4501 atttaattat aaaactaaat ttaatttatt tattaaatac aaatttaaga cataaataaa
     4561 acgctcaatt ttttaacgaa aggatatgga tgaaaaaaag gctattatca ttaattttaa
     4621 tcagtcctat ttttgcattt ggtgctggcg gtattgataa agttaatacc tttatgcaaa
     4681 acttaagcat tgctttatat gcacttggtg gagttttact cacaattgca cttatgtggg
     4741 gtgcttccaa aattatgtat caagggcaaa ctcttagaga agttgcacct gtttttatcg
     4801 gtggcgttat ttttggatca gcttcggcaa tagctggtta tatcattaca taaataggac
     4861 tagctatgga gaaaaatcca ctttttaaag gtttaacgcg tccacctatg atttttggcg
     4921 ttccgatgac accttttgtt atagcgatgg gatgtatcat tttaattgca ttttatagtc
     4981 aaaacatttt tttagttggc ttttctattc ctgtgttttt tatcatgaaa gcaatgacaa
     5041 aaagagatga ttttattttt cgattaatgt ttttaaaaat gagatttttc tccaatcctg
     5101 cttccaaaaa ttatcataag gttaaaactt acagcacaaa ctcttataga caaatgccgc
     5161 caaattctaa ttttccaaaa atatctgttt tcggacttaa tgcagaacct agttttgaaa
     5221 aattaattcc tttttcatca cttataaatg attctgtagt cattacaaaa gattattttt
     5281 taatgacaac ttgggagatt ggaggaatta gttttgaagc agaagaagat gatgaactag
     5341 atattaaaaa tgatcttttg aatatgcttt ttaaatcttt tgctaacgaa tctgtaagct
     5401 tttattttca taattgtaga tattctatcg aagacaaatt aacttcaaaa tttaataatg
     5461 cttttttaga agaaattgac agaaaatatt atgagagttt taagcaagga actcttagaa
     5521 aaaattcttt atatttaact cttattttca atcctttaaa agtgaaaata gaaaaaacaa
     5581 cttttatgaa aagttctttt gaaaataaaa gaaaaacaat tagcgtattt ttagctaaat
     5641 ttagcgaatt tgctgataga ctagaagcaa atattaaaga ttttaaccca aaaagattaa
     5701 aaacatattc caaagatgat aaaacctact ctaaacaact agaattttat aattatttac
     5761 ttggtggtaa atttaatcct ataagagtat taccaagtcc tatagaacag taccttaatg
     5821 gcaatttaca aaacatacaa tttggacacg atactattca atttaaccaa aatgatagca
     5881 caaaaaaatt tgctagatgc attgaaatta aagactatac aaatgaaact tttgcaggaa
     5941 ttttagatat cctaatgtat ttagatgtgg aatacactgt aactcaaagc ttttctccta
     6001 ttcctagagt ggatgcaaaa tcagcaatat ctaaacagaa aaaacaactc attgcaactg
     6061 aagatgatgg attttcacaa gtagagcaaa tagatgaagc tttggatcaa cttacaaatg
     6121 gggaaatctc ttttggcaaa tatcattttt caattcttgt gtatggaaat actataaaag
     6181 aatgtaaaga caacacaaat gaagttgtta caaagatgaa cgaattagga tttggagtaa
     6241 ctttagcaac gatcgcccta cctgcgacat ttttttcgca actaccatca aactttgcta
     6301 tccgcccacg cattaatctt atctcatcca ttaattattc atctttaatt gctctacata
     6361 atttttctat gggcaaaaga gataaaaact gctggggtga cgctgttagc attttaaaaa
     6421 caccaaacaa acaaccttat tattttaatt ttcaccaaag ttctggtgca aataaaaatg
     6481 attttggaaa attcttccta gcaaatactt tgattttagg tcaaagcagt ggcggtaaaa
     6541 cagtgtttat gaactttatt gtagatcaaa tgatgaaata cgctagcaaa gatacatttc
     6601 ctgatgatat tcctgaagat aaaagaaaat ttacagccat ttatttggat aaagataaag
     6661 gtgcgttagg caatatactt tgtgctggcg gtagatatat tagcattgaa aatggcaagc
     6721 cgacaggatt taatcctttc atggttgaaa gcacacaaga aaatataaga caacttcaat
     6781 cgctaatgaa acttttagta actagaaata atgaaattct tacaactaga gaagaagaaa
     6841 tgctcaataa tgctgttaat tctcttatga aaggttttga aaaagaggaa agaaagtatc
     6901 ctatttcttt acttttagaa aacttaactg aaaatgtaga tgatgataat tctcttaaat
     6961 caagattagc actttttaaa aaaggcaaac aatttggctg ggtatttgat aacgaatacg
     7021 acaatttaga ttttcctgac gatatcaatt tatttggaat tgatggaaca gaatttcttg
     7081 atgataaaga tgtatcaggg atattaagct attacattct ttggcgtgta atgagcttgg
     7141 cagatggtag aagactttgt attgatattg atgaagcttg gaagtggcta gaaaatgaaa
     7201 tcgtgcaaga agaagttaaa aacaagttta aaaccattag aaagcagaat ggatttttaa
     7261 gacttgctac acaaagttta gaagactttt taaagcttaa aaatgctgca actcttatag
     7321 aacagtcatc aactatggta tttttatcta atccgaaagc caaagaagaa gaatatgtta
     7381 aaggagtagg tttaagttat gatgagtata tgatcattaa aggtttcaat cctgtgaaaa
     7441 gacaattttt aatcaaaaga caagatgaaa aagtaatttg cactcttgat cttagccctt
     7501 tgggtaatga aaatttaaaa atattatcta cagaaacagc atacattgat gtcattgaaa
     7561 aaattttttc acaagaaaat aaaagtcttg atgaaaaagt attagagctg aaagaaattt
     7621 ataaaaactc ataggagatg aaaaatgagt aataaagtga ttattaataa acaagaagtg
     7681 caatttgaca ctcaaaataa tcaaatcttt tgcacaagtt tagatgtggc taaggttttt
     7741 ggaaaaagac attttcatgt tttaagggat attgagaaca ttttaaacga tttgcgagaa
     7801 atagggactt ctcaagacct atccaatttt ggggagacct acagaaatac tgaaattagg
     7861 ggttttggca aagttaaagg gaaaacaaga aaagatcgtt gttataatct aactcgtgat
     7921 ggtttttcac ttttagcgat gggctttaca ggtaaaaaag cattacaatt taaaattgca
     7981 tttattaatg cttttaacga aatggaaaaa cttttacaaa aagaaattaa aagccctaac
     8041 aaatacttaa cagatttgat ggaacttatt tatccaaact taccacaaaa cgattacaaa
     8101 gttagtgtga ttatcacaga taacccttat tctaaagaag ctaaaaatgt attttctttg
     8161 aattatcttg ttgataatcg cacaccaaaa gatccaaaga agttgcaatg agtgataaag
     8221 aattacaaaa agaaatatta gctttagaaa acgatgttaa gcaactagaa gcaactattg
     8281 atgtaattaa acaaagaatc actcatctta aagatattgc ttgggataga caaagtaaaa
     8341 aagaaagttc tcaaatgtat aaagtgttaa aagaagataa aacacataca agggttaaaa
     8401 gtaatgtagg agatattaaa gtagataaag actttatgga taaagaaatt aaaaaacatt
     8461 tagataatcc aaatttaaga ggaatggtta ctacacaaga gatgttatct tttcctaagg
     8521 tggctaaagg tgtggaagct aacaacgaag caagaggcta tacttggcaa gtaaaagcaa
     8581 acgatggaaa tactttagtt tatggaagta gaaaatatga aaccaataac gaaaaaattc
     8641 ataggttagc gacaagccat agtaaaacag agaagaatga aagacaagcg gaagtgggtg
     8701 ggcgtagtca tccccaccat cccatattta atgacttcaa ttttcgcaaa tccgctgaaa
     8761 atattatatc acaacaaaac aaatccacaa atgattttaa agcaaaatta gaagaattta
     8821 gcaccaaaaa aacaaatgca attgaatcta taaataagga gtttaaaaga tgaaaaaata
     8881 ttacaccaac aaaaaggagt taaacaatga ataatgtaaa tctaatcgga tacttaggaa
     8941 aagattttga agtaggcact acaaatagcg gaagagttta tgcaaaaaat tctcttgcaa
     9001 ttacaaagcg atggaaaaat gaaagaggca atgaagaaag tagcacgact tggataccta
     9061 ttgttttatt tggcaaaagt gcagaaagtg catcaacaca cattaaaaaa ggttctcagt
     9121 ttgcgtgtag tggagaatta tcatccaatc aatatcaaga tgaagatgga aatactagaa
     9181 caatgctaac cgtgattgta tctaaatttt attggcttgg caaaaaagat aaagatgaca
     9241 atggaacaca aaatccacaa gtcccaccaa aagagccaaa tattgattat gaaaacacaa
     9301 atatagaatc tgaagaaaca caagtatttt aagatttaag gataaaaatg tctataaaaa
     9361 atttaagtgt agaagaatta gcgcaagaat tagaaacttc aaatcatgaa aagctgatta
     9421 aagctttgtt tttatttgaa aaaaattctt caatggaaga tcttaattca gatcaaatag
     9481 aaataatttt agatgaagta tatgaatttt atatcaatca taaatctata tcttcttttt
     9541 tacaagaaga tataaaccaa gcattagata aagctattga taaagagctt tgcaaaaaac
     9601 aagaaaaatc atttgaaagg taaaaaatga aaaaaaatat ctttggtgtt aataaagcca
     9661 tagggaaatc tcatccccat gaaaatgggg caagactaat aagccttgac tataattata
     9721 caaaggagta taattataac tatgagattt gtgtaactca atttaaccac ctcttttctg
     9781 aggttaaatt tagccacagg gttgcagccc tatggctaac cccacaaaat tatatccaaa
     9841 aatttaaaaa atctattctt attcttactt ccttattagt tttgcctaac ttagcattta
     9901 gtgctggtat tcctgtagtt gatgtaacag caaatcagca aatggctaca caaaacgcta
     9961 aacaagtggc agaatgggct aaagatgctt caagatggac tgaaacagta gcacactatc
    10021 aaaaacaaat tcaagcttac aaagatgaac ttttatcaaa aacaggcatt agagattcag
    10081 taacttttct aaaagatatt aaacaaatat attcagattt tgctgaagtt gggcaaaata
    10141 ttcaatcatt ttacaatgat gtattaagag atccacaaaa atttttaagt gataaaggta
    10201 atgaaatttt tggaaaatat acgagctttg atcgatgtaa ttttgatttt ttaagtcaat
    10261 cagaaaaaaa catttgcaaa atgaatttaa tcacttatgc tgctcaagta gaaacctata
    10321 atcaagcttc aaaacaaatg gatacgatta gtcaaacact ccaaaaattg caagataaat
    10381 tagtaaattc caaagatatt aaagaaagca cagatgttgg caatgctatt cagttggaag
    10441 tggcaaaaat tcaaatggtt aaaaatcaag ttgatttagc caatgcaagt tatgaaaacc
    10501 aaagaaaaat taaagaagat atggctatgc aagaatattc taagtcgtta caaaagccac
    10561 gagaaagtgc tatggaattt tttaagaaca acaaatgaat ttagatcttt ttcaaactct
    10621 aggtaaaagc atacaacaaa ttgttgatgc tataagacaa gtaggcacaa atgataaggt
    10681 tgcagaactt agcgtattgc tttctattat tatcacttta gtcattatgt ataaaggcta
    10741 cgaagtctta atgggtagaa gtcaaagccc tattagagaa ttaacttggg atatagttgg
    10801 aaagcttgtt gccattactt ttgccttaaa tttagggggt tggctagatt taacaatttc
    10861 aacaatggat ggattatacg agtgggcagg aggcggaacg caaatgtata aaacactaga
    10921 tgaaatgtat gcaaacacag cacaacttac aaacataatt tgggctaaat caagtggtgt
    10981 tggaggtgct attttagcta ttgtagcaat gctactttgt tatgtaggat ttgcaattgc
    11041 tgtagttcct gcacttacaa tctttgttgt tactaccttc acacaaacac tgcttgtaat
    11101 caccgcccct atagtatttt ggcttttagt ttttaaagcc actaaaaatg tttttacaca
    11161 gtggatagga cttttacttt caaatacttt agtcattttg cttgtaggct tatttttggg
    11221 tgtttttatg gagcaaatat caacttggat taagtatttt gcaaaagtaa ctcaagcagg
    11281 agacgaagta ttaggcacaa gtattttctt tgtcattgcc gctttagttc ttgtcattat
    11341 gattatttct gcaaaacttt atgccgaaaa agttgcaaat gtttcaatgg aaggagctat
    11401 gggcggagta ataggttctg ttttaaaccc tgttggtaga ttagcaggtt gggctggagg
    11461 caaagtcgca ggaaaaactg taaatacagc aaaagctggt ggaaaattag cagccaaagg
    11521 tactttggct agtgctaaag gcggttatag ttttgctaaa aaaatgtatg aaagggctag
    11581 aaatgcaggc taaattaatt tttattttat tacttggtgt tttatttttt agtgcttgta
    11641 gcactaaaaa tcagggtaaa tatgatgaat tttttaacaa tcaaacagga tggattcctg
    11701 ttaatactca aaacaaagat ttaaataaag gaactatgga tgaaaaatga gtttaatact
    11761 gcaatagatt atgaagcaag ttttagatac ttaattgaaa aaagtaataa aagagcttgg
    11821 cttattgctt ttatttctat ttttatagcc attatttcca ttatagctgt tgttttactt
    11881 actcctttaa aaacaataga accttatgta ataagagtag acaatactac aggaatggtt
    11941 gatattttaa ccatgcttga tgaaaaagaa attaaagcaa atgaagcatt agataaatat
    12001 tttattagca cttatgtaaa agctagagaa ggctattatt atgatctttt aaatcaagat
    12061 tatttactta ctcaattaat gagttctgaa aaagtagcaa atgaatatag ggctttatat
    12121 gaaggtgata atgcaagaga tcaaattcta aaaaactcca atgaagtaag tgttcaaatt
    12181 ttaagtattg ttttaggaga aagtaacgga gtgaaaactg ctacagtcag ggcaattatt
    12241 actacaaaaa atttaacttc caaaggaaca actcaagcaa caaaagtaat aacattaagt
    12301 tatgactata tcttagcaaa agctagcgaa gaaaacagat ttttaaatcc tttaggtttt
    12361 aaagtattaa cttatagaat tgatgacgag gtggcacaat gaaaaaaata atcttgataa
    12421 atttattgtt gtgtagtttt atttgggctt taaatattcc aaaaacttct acatttgata
    12481 aaagaattgc ttatgcaatt tataatgcaa acgatgtatt tcaaattaat gcaaaaaatg
    12541 gctatgttag cgttttagaa tttggtaccg atgaaagaat tatcaatact gctacaggtt
    12601 ttgcagaagg ttgggattta attgaaaaag acaatctttt atttataaaa cctaaagctt
    12661 ataaaacaca acttgttcaa caagaaaaca ataatatagg agagagtcaa gcatcacaag
    12721 aattcgtttt agatccaaat cctcatgatt ggaaaactaa cctaattgtt attacaaatc
    12781 taaatactta tgtattcgat ttaaaacttg taaaccaaaa taataacgct acctataaac
    12841 tcagtttttc ttaccctaaa aaagatttaa aagccgctaa agaattttta gaagcacaag
    12901 aacaagaaaa tatacgcaga gatttaaata aaaataccat tcctagaaat tgggattttt
    12961 atatgaaaat taacaaaggt agcgaagaca taagtccaaa ttttgcttat gatgatggtg
    13021 tttttacata tcttggtttt gataatacta aaacttttcc tgctgttttc atgtatgata
    13081 atggtaaaga aagtatttta aatactcata ttaaaaaaga tggcaattat gaagttttag
    13141 taattcaaaa aattactaaa caaatcttgt taagaagtgg cgataaagtc gttggtattt
    13201 ttaatcgtgg ctatgcaaaa aatcctttag ataaaacaag agaaacctcc aatgaaaata
    13261 ttcaaagaga gataaataaa aaataaaacg aatgaaacta aaaggaataa gtatgcaaga
    13321 taaagaacaa gataatttag acaatgattt tgaaaatcat acaagtgatt tacacgatca
    13381 aaaaaatcat cttagaaaga tacaagctta tgtaattttt gctgtgggtg gattattatt
    13441 agttttaata ttagtttatt ttttaaaatc atttttaagt agcaatacaa ctaccgaaga
    13501 agtacaaaaa gaagataata aagatttggc acaaagtgtt aaaacaaagg aatttattcc
    13561 acctcctcca caaaaaacat ttgatgaact aattgcacaa gaatcaccaa aaccgacaca
    13621 agatttaata cttgaaccca aacctccaaa gcctagaatt gttaaaggtg caggagttac
    13681 tgttgtcgct tcatctaata atgatggatt tggaaataat ggcacaggaa acagggaaga
    13741 atttggagaa aaacctaaca cagtgtttga gtttggacaa aatggttctt tacaaaactc
    13801 taataattta caaggtggta gtaatggaga ttttgttgga gaggtcttca ctcccacaat
    13861 cgctaaagtt agcgaatttg atcaaaattt actattacct aaaggaactt acataggctg
    13921 tgctttaaaa acaagattgg taagttctat taaaggtgga atcgcttgta ttgtatcaaa
    13981 tgatgtctat tctgctaatg gaaatactct tttaattgaa aaaggtagca ctattacagg
    14041 aacttttaat actggacaaa tggatgatgg aatggataga ttatttgtaa tttggcaaga
    14101 aattagaaca ccgaacaata tcattatccc tgtttattca ggtgctaccg atgaattagg
    14161 tgcaagtggc gttcaaggtt gggtagatca tcattactta aaacgatttg gctctgctgt
    14221 tttactatca atgatagatg attcactggc tatcttagcg gatcaaattg caggtaaaga
    14281 taataaaaat aattatgcca attacactga aaatacaaga gattctgcaa aagaaatcgc
    14341 aaatacagca ctagaaaaaa tgattgatat taaacctaca ctttataaaa atcaaggtga
    14401 tttggtcggt gtttatgtta atcgtgatat tgatttttca aaagtttata aacttacaag
    14461 gaaaaagaat gtcaataacg ctagataaat atactcaaaa attttttgga gaatttttaa
    14521 aagatgataa tatcaatgaa atctgctata acggcgataa taaaatttgg gtacaaaact
    14581 ctaaaggatt atgggaatgt atagatacta aacttgattt tgaacaagct ggacattttg
    14641 caactgcttc agcctcattc aaaaaagata aaatagatgt atcgcgccct attcttagtt
    14701 gtattctagt aggtggagag cgtatgcaaa ttgttattcc tcctgctaca aaaagcgaac
    14761 acatttcaat tactattaga aagccaagca aaactcgctt taaaatggaa gatcatatta
    14821 aaagcggact ttttgaagat ttaaatcctg atgataagaa taaaatcaaa ccaagcgatg
    14881 aagaattaat caagctatat gaagcaagag attatcaaaa ttttatatcc aaagctgtta
    14941 gctatggtaa aaatattatt atcgctggtg aaacaggaag cggtaaaact acctttatga
    15001 aaactcttat tgattttata agccttgatg ataggattat cacaatagaa gatgttgaag
    15061 aaatcaaatt ctatgaacac aaaaatttcg tgcaattatt ctatcctagc gaagcaaaaa
    15121 gtacagattt tttaaattct gcaacacttt taaaatcttg tttaagaatg aagcctgata
    15181 ggattttact agcagagctt agaggtgctg aaacttatga ttttattaat gttttagcta
    15241 gtggtcatgg tggaagtatc acaagttgcc atgcaggaag ccccgaagaa acatttacac
    15301 gacttgcttt aatgactcta caaaatccac aaggtcaatg cgtgcctttt gaaattatcc
    15361 aaaaaacact taaagactta atagatattg tcgtgcatat ccatgcccat catggaaaaa
    15421 ggcgtattag cggcatttat tttaaagaaa tggagagata aatgcaaaat aataaaagca
    15481 ttcaaatgat ttttcttgct atagcgagtt ttattctcac ttacttaata acgcccattg
    15541 tttttttctt tttaaataaa gtaaaaataa tgaaagcgat tgaaatttat aacataaatt
    15601 ttacgctaca agcaatctct aatggttatc caaaaatatg gctttcttta ggtattactt
    15661 ttggcatttg ttttgttgtt ttttctgttt tggtgttatc tttaaaagcc aaaaaatctc
    15721 aatttggcga agctagattt gcaaatttta atgaaattaa aaaaatgaat ttattttcag
    15781 ataatggaat aattatcgga aaatacaagg gaaagatttt aagatttagc ggtcagcaat
    15841 ttgtagcctt aggagcaccc acaagaagtg gtaaaggcgt aggtatagta ataccaaact
    15901 tgttagagtg gcgagaaagt gctgttgttc aagatattaa acaagaatgt tttgactaca
    15961 caagcaaata tagaaaagag attttaggac aagaagttta tttattcaat ccattttcaa
    16021 gacagacaca tcgctataat cctttaactt atattgatat gagtgataaa gagcattgcg
    16081 atagtcaatt aatggattta ggtaacatac tctacccaca agatggggat tctacctcaa
    16141 aatttttcaa tggcttagca caaaacttat ttattgggct ttgttattta tggcgtgatt
    16201 tacaattaac cgattatgga aaagaatttc aaagtgcgtt tgatattaat gtaggagaat
    16261 ttaactttta caatattttg caactctcaa aaggtttctc acttaaaaat gaaggaaaaa
    16321 ctttaaaagg atttgatgat acatacaatt tcttatctta ttgtgaagtt ttagatgaag
    16381 caaccataag gcgtttagaa acttatttta atattaactc agatgctact aaatcaggtg
    16441 taatgagctc ttttaatgct ccgcttgtgc catttgaaag tgaaacatta agattaagca
    16501 cagaaacaag cgattttgat ttgcgagatt tgcgtaaaaa gaaaatgaca atttatatag
    16561 gaattacgcc tgatcaatta gcaaatgcac aatttatttt aaatattttt tggtcgcaac
    16621 ttattttatt aaacaccaaa gaattgccac aaagcaataa agatttaaaa tatacttgtt
    16681 taatggttat ggatgaattt actgcacctg gtagaattcc tatctatcaa tcagcaatca
    16741 gttttatggc tggttattgg ttaagatctt tgatgattta tcaatcaaat tcacaacttg
    16801 aaacacaacc acctttgggc tatggaaaag aaggagctaa aacactctta acaaatcatg
    16861 cttgtcagat tttctatgcg ccaagagagc aagaagacgc agaagctatc tctaggattt
    16921 taggaaatac tacttttaaa acaaaatcaa gaagtattaa tacaggcaat aatggaggtg
    16981 gatcacatag tattagcgaa gcaagtaggg ctttaatgtt gccacaagaa cttagagaaa
    17041 tgccttttga aaatgaacta attactattg atagtggaaa acctatttta tgcaataaag
    17101 cattttatta ttcagattct tattttatgg ataaatttaa agctgtttcg aaaagtttat
    17161 caacaataag aaaaatccct tcacgcaaac aattagaaga tgcgatctta aagggagaat
    17221 gtaaagtaaa aattcaaatt ataggagaaa acaatgataa aaaaatcgct tgacaattta
    17281 gtcataatgg ctttagtttt tataatggtg ggttgctcta cagccccaaa accaaaagaa
    17341 ttggatgata attctgcatt gagtatcaat aattctattt tggagaaaaa atatagcttt
    17401 gttcctaaag atccttattt gagcggattt aattggactt atcatatcgt ggttgagaaa
    17461 aaaactatag atgatgattt tattaaaaat gatcttatta ctaaaacttt tttactcgca
    17521 cacaattcta caaaaatcat tttagtaggt agaaaagatt taattgaaca atataagcaa
    17581 tactttgaaa aaaatcaagt tttagcacct atagaattac agcctgtcaa tcctattgag
    17641 cgtgatttta acaaagttaa tattttattt tttaataaaa caaattttta aaggagagaa
    17701 aaatgaaaaa aatattattc ccattttgtg tttttggtgt aataaatagt gttaatgctt
    17761 tagatttgca attactatct ggtgatacta gaacttcttg cgaagtaatt ctttgtttag
    17821 caagtccagt taaaccacct gaatgtgcat cttctttagc aaaatatttt agcattcact
    17881 ttaaaaaacc ttggaaaact atccaagcaa ggaaagaatt tttaaatttg tgtcctattg
    17941 acacaacaaa tgatccagaa atgtataaat ataaaaatga tattttagtt aacttagatg
    18001 gagaatgctc tacaactgca ttaaatcaaa gaattgaaaa atcaaaacaa cctttaaaag
    18061 ttgaaaaaat atgcactggt ggtgggcata atggatcaag agaatgcgta gaaataaaaa
    18121 cttatggatt tagaataaat cctgaactta caaactcttg caaactttta gcttcatcaa
    18181 aatacacaga ttatcattta aaatatactt gcgataagaa attttatgag caaaaagatt
    18241 gggaaagagg ttatgaatta aaagaagtat cacaagaaat ttataatgct ttacctgtat
    18301 cgcaaagaga acaaggagaa aaattaactc ctataagtta tggagaattt attaaactac
    18361 ctgctaataa aagaaaacaa gaaggatttg gcaagtatta tagaatcgat attgcttatt
    18421 atcaaaaaat aattattaaa aaagattgct ggataaacga gaaataacaa tgaatgaaga
    18481 aattaattct aacgaaaata atctttttga aatagttaat gaagataatt caaaaaatat
    18541 agctatgcaa aactataatg aattattgga aaaatttgaa aatcttataa aaataattat
    18601 tgctaaaatt aatgttggta agcaaaatgc acaaaataat acagaagatg gtatttttaa
    18661 agatttagaa agcaatatta tagagctaga taatacctat ttagctctta tttcttattt
    18721 taaaaatcct cctaatgatg aagagaaaga aattattaat aaaaccattt ctattaaaaa
    18781 aacaatggaa gattttgcta aatttgctaa tgaaattcaa aaaatatcat tggatgataa
    18841 acttaaacaa tataacgagc aaattaataa attttgcgaa atagtagaat ataaactttc
    18901 tcataatgca aaaaattata atacttttct tgatcatttt gttgaagatg gaaaacaaaa
    18961 attgaataca ttttcagaaa tttttacaaa aatgacaaaa aatacaaaat ggtatcttat
    19021 attttttagt tttacttcta tagggttagg tatagctctt ggcattttaa ttttgcttac
    19081 ttatataaaa tattcagaat ataacaattt aaaagaaaga gtaagcacaa tcactcaagg
    19141 tttagccact atctctattg atgaaaatag taaaggaagc tttaccttga gctttgcaaa
    19201 aaacaaaaaa actattttca atgagaataa aaatagtatt caaatcacac tacaaggagg
    19261 tgaatgaaca gaacaattat atacaaaaaa atgcaaaaaa caaaaacaaa tcataaaaaa
    19321 tttaaaaagg agaaaaaatg gcatttggaa aattagtaaa tgataagatt gttattgata
    19381 ccaataatgc tttaaactac aagaataaag aaggtgatat tcaacaaaga aaagtagata
    19441 ctgctttaat cgatgttatt aaagaagctg gacaagttgc tgcaatggaa cacggagctg
    19501 tgcttttttc agcaaaaata aatgatgagt ggaaaaacta ttttgttaat agagatgaaa
    19561 aaactcacaa tatagtttta aaacctacaa attcacaaaa tagagatgat ttcatatata
    19621 tcaactctaa cataaatgag caaggttatt tttactacac aattaatcaa aagcgagaag
    19681 ctgcaaaaga attaattgaa ggaattggga ttatagaaca ccaaaaccaa gatggaacta
    19741 aaagtcacta tttagaaact aatgtaaggc tttacaatga agaattaaaa caggaactta
    19801 aagaaaaagg taatgagttt atagctgtaa tttcaaatgc tggaattaga attgttaatg
    19861 aagctgaaat gaaagcacaa aaacaagaac aacaaataca gcaaactcaa gaaattaaag
    19921 agcctgaaaa aactcaaaac caagagtttg gaagataaaa atatgcacct cataaaggtg
    19981 catatttata gttattatta tttattaata gtaactataa ataacaaatt taaa
//
LOCUS       DAPIVO010000033        19790 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.033, whole genome shotgun sequence.
ACCESSION   DAPIVO010000033 DAPIVO010000000
VERSION     DAPIVO010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19790)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19790)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19790
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.033"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..1303)
                     /locus_tag="RJ239_001031"
     CDS             complement(<1..1303)
                     /locus_tag="RJ239_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HDV7331159.1"
                     /translation="MKLKLNFLPYFSFIPKKLNTNSIIFKIIKVFFIAILLSNSIYLS
                     FFENIFTQTISPFLAIWGLVLLLKSKTSKQYFWIGFFVGILWFWWIGLSSIYFNLNYL
                     VPIIPIIIGFIYGLLFRLCYLLKFDFLRLCGIFCISFIHPLGFDWFNWGIFTVYGFFD
                     PSYRGIICIFLIAYFIYEGYISRYYKIAIVLILFFSGFQYNEKQAQTLNLNYKLINTN
                     ISQDQKFLQENLKSNSDILIQDILQAINEKKELVILPETAFAFDLKNTKYELMLKELS
                     YKITIITGAFHVEKEHTYNSTYIFKKGNVYILNKHFLVPFGEEIPFFKDLTKKYFLKN
                     IEEFSKGPIQSKYKLDNQIITNAICYEATKEQNYQNSQIIIALSNNAWFNNSSEYKLQ
                     QLLMKFYASKYGVSVYHATNGKENIVILPKKLLSKDWKNLSK"
     gene            1276..1548
                     /gene="yajC"
                     /locus_tag="RJ239_001032"
     CDS             1276..1548
                     /gene="yajC"
                     /locus_tag="RJ239_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDV7331160.1"
                     /translation="MAENSILTSLLPLVALFAIFYFLVIRPQQKQAKAHKQMLESLQK
                     GDKIITNGGLICEVVKPEEDFIKVKLNEDNVTAKISREFIAKKIDA"
     gene            1541..3121
                     /gene="secD"
                     /locus_tag="RJ239_001033"
     CDS             1541..3121
                     /gene="secD"
                     /locus_tag="RJ239_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HDV7331161.1"
                     /translation="MRNSKINYRLIIFIAVFIFGVAFSLPSFLQSERGAKINLGLDLQ
                     GGLYMLLGVDNEEAVKSKIKSIASSLSYSFNKENILNDGLNTHDDILEFTLLDNADIA
                     KVENLLKEIKGINIQSENMHYKISFTSKEVKNIENFALLQAVETIRNRLDQFGLAEPT
                     VAKQGDDKILVELAGIKTKEDELRAKERITKAAHLQLMEVDDSKMGQASTMSDAEAAS
                     YGLILVPDSRNPNLKYTLKSIPILDGSMLTDARVGLSDKSNYPVINFTLNAEGSKKFA
                     DYTGANVGKRLAIVLDNKVYSAPSINERIGGGSGQISGAFTQEEARDVAVALRSGALL
                     APVKLLEQRSIGPSLGADSIKMSMIALIGASVFIVVFMMMYYGVAGIFANIAMLVNVL
                     VVVAVMAMFGATLTLPGMAGLVLTVGMAVDANVIINERIRELLRDGVNIRVSIEQGYK
                     NAMSAIIDSNITSLVTSVALYAYGTGAVKGFAVTLGIGIVVSMITAILGTHGMFDYFM
                     QRIEKNNNTRFWFGYRRR"
     gene            3121..4092
                     /gene="secF"
                     /locus_tag="RJ239_001034"
     CDS             3121..4092
                     /gene="secF"
                     /locus_tag="RJ239_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HDV7331162.1"
                     /translation="MQFFSEKKIYDFMRMRFAAISLSFILFFGSIYLLWDRGLQYGID
                     FSGGTLVQLKYENAAPITQIREILENQGTFQNLSVTEFGSNEEVTIRFLGSNDNVSND
                     IGEHISTLLKDTGKFEVRRADVVGPKVGDELRNKGLMAIAVSLIAILIYIALRFEWRF
                     ALAAIISEIHDVVITLGAISLFKIDVNLDTLAAVLTVLGYSLNDTIIIFDRIREGIKT
                     SKKTELAPIINESVSATLSRTVLTSGLTLATVVILYFFGGEMIQGFSLALIVGIIAGT
                     LSSIFVASPTLLWFKFSVLEFRNKEIEKAKRKQDKERNRAMYEKGTV"
     gene            4102..6531
                     /locus_tag="RJ239_001035"
     CDS             4102..6531
                     /locus_tag="RJ239_001035"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HDV7331163.1"
                     /translation="MAYEASLIEKKWQKIWDENEYFEPKDDLNLPKKYILSMFPYPSG
                     RIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIKHKIHPKSWTYEN
                     IAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTKEANVNWCEQD
                     QTVLANEQVEDGKCWRCGHEVVQKKMPGYYVKITAYAEELLKDLEELKDKWPNQVLTM
                     QENWIGKSEGLEFSLNLDEESKQKTKESSLEVFTTRADTIYGVSYIALAPEHKIVQNL
                     LSQNLLNQDVLNKIKVIQNQSPRERQSSEKEGYFLGIYAIHPLSGEKIPLWVANFVLA
                     DYGSGAVMAVPAHDERDFEFATKYNLAIKQVIQTQENLPYMQKLGKLINSQEFDNLDC
                     NEARLKIISQFEAKNIGKRVVNFKIRDWGVSRQRYWGAPIPMIKCQSCGIVPQKLENL
                     PITLPEDVQITGEGNPLDKHPTWKNCICPKCGKEAQKESDTLDTFFESSWYFARFASD
                     EKTWQEKALDEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPFDR
                     LLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKELEWNDDAVE
                     GAYRFICKLYDRAQNVKKGELVELKQENLNKEEKYARLKVYEALKKSFEVYHQSFAFN
                     TLIAACMEALNALALCKNEALEQEAFYIILNILEPIIPHVCFELSEELFKCKNFKKLE
                     LKEEVFVKDTLNLAVSINGKKRAEFEISSSASKEEILAFAKENTAKWLEGKSIVKEIY
                     VEGKLVNLVIK"
     gene            6528..7040
                     /locus_tag="RJ239_001036"
     CDS             6528..7040
                     /locus_tag="RJ239_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7331164.1"
                     /translation="MKKILIFCIGLFLGACGYIPTSKIANNIFDEKVYVNVELSQQDP
                     KNSIYVADTLKEMVISKLGRKLALKHEADDVINVKMNNLEFIPLAYDKNGYVISYKAK
                     LNLDFNVVFKDGSSQAFSTSGSYNFEISPNSIISDSARYEAIRAASSEAFDEFISVIA
                     IKGQKRDSKY"
     gene            7024..8421
                     /locus_tag="RJ239_001037"
     CDS             7024..8421
                     /locus_tag="RJ239_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331165.1"
                     /translation="MIPNTNEIAKQTLIALKERKLKPTPENYTEIFEELSLKYGITSS
                     NKAKLDKYKTLLLPIYQQELNSKTIRSLEELISFLISVLNRQSGKQFSEFFDFLYTIS
                     KTLQISKDKKIRDLAKVTSIRISKTMDSESIYLLTKKWKELERNYDENDLEEQARKYG
                     ISKYDDYDSVIKKLLVKLEERSYEHFSELLCLGLNPSLVEDLKIQGFIQNLTQKPFVI
                     GEENFKNELMEFINHRIMVDNMYVQKNLNFFNDNLKKIYELLVLLNKSNEKNMDFINT
                     LKPDENGEVKLSFEDLKLKFKQLGEKITSLNNQIEFTQSLEEREAWSVLKELDKMDEN
                     FNKYKVNYSLALFSIVNYRFIMEKYGMGSLNEIFVRFKKILKDSCSEFDELWMIDEKS
                     YLIVSPGKSKDEITQLVNTNLKTIENFRFIYKQDIITPKIHVAYLDKQSKPSINILDE
                     LIKQIAAVNEQHNES"
     gene            8387..9571
                     /locus_tag="RJ239_001038"
     CDS             8387..9571
                     /locus_tag="RJ239_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HDV7331166.1"
                     /translation="MQRLMNNIMKVENFLAQKSINYDKIDRFLMFRMYEKYKKYFKNI
                     PIIQLIGTNGKGSTGRYLTQLLENLNYKIGHYTSPHIFSFNERFYLDGKIANDEELEQ
                     AHIRLEEIFKQDLQKLSYFEYATFLAMILFQKCDFIVLEAGVGGEYDATSIFERRMSI
                     FTRIGFDHIQILGNSLEDIARTKLKVMAPIALISDEQEQNVLNLAKKIAFLKKANLQV
                     SSLNPFLKEKFEIYCKKFVLPYFLKHNLKLALKACEILTSQEKTLEALKKLQELNLQG
                     RCQEISPNFFVDVGHNPMAAKAMLDKFQGEKINLIYNAYLDKDIFQILNTLKPIIDTI
                     QIYKYKSAERKLADDEIYSIASKLGMQCKEFVKLEENKKNLVFGSFMLVENFLKEWCG
                     KK"
     gene            9558..10460
                     /locus_tag="RJ239_001039"
     CDS             9558..10460
                     /locus_tag="RJ239_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDV7331167.1"
                     /translation="MVKNKFTITITDINGSRHFYLNQIIKKIVFYIIAFIVLFLVFSG
                     FYIKYLDSKLSDISEKREELLKKSKELELSNSQMQKSIEEKTQQYAAIEDKIASFEEA
                     LGLEAENNLTISARLDNLQLTNEQQLGILGQIPNGWPIENKGITGNFGWREHPLLKRR
                     EFHPGIDLRAEIGTPIYAPASGVVEFSGYSDNGYGYNVILLHNFGFKTVFAHMMRKEV
                     VKAGQFVNKGQLIGYSGNTGLSTGPHLHYEVRFINKTLEPLYFLNLQRKNMNDFFNQE
                     RRVPWQSLIKAVSAQHPALAQKQQ"
     gene            10397..10792
                     /locus_tag="RJ239_001040"
     CDS             10397..10792
                     /locus_tag="RJ239_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HDV7331168.1"
                     /translation="MAIFNKGGISPTSSSSSETTVISSGARIEGKFYFASMLHVDGEL
                     SGIIHSESIVVIGKNGNLKGELQADKIVVNGCFEGQLEANSLEILAGGVVNGDISTQK
                     ISIENGGRFNGTSKIKEDTIKLIENNNEE"
     gene            10792..13728
                     /locus_tag="RJ239_001041"
     CDS             10792..13728
                     /locus_tag="RJ239_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDV7331169.1"
                     /translation="MQASFYEYLQNPKICELFLCKDEKQADLLAQVSRFKGLKTFVLP
                     DFRAQFGDDLRAFSKELFDLCKILNAYHKEEEKKILISPLNTVLKKLPSKKHLQNYHI
                     DKKQNFDLKCFEDEISRLGYEFVDIVQDKGEISIRADIIDIFCINEENPIRILLFGEE
                     IESIRYFDLQSQKSIPNELEHFEICPFLKYFDKENYEIFKDKLEDFQSDALIHDINSL
                     GFWCIDDFFDYLELDFLACEKFDINEYEKDISFVNAKILPQAKKFKELQSSYNKDFFE
                     FHKNKKITLLAKNEALFKALELEDTQNIHFVKSDLRLNLISPEELIISLNQKEKQKTR
                     KKASLIIDELKNGDYIVHEDYGVGKFLGLEMIVISGAKKEFVAIEYQNSDKLLLPVEN
                     LYLIDKYLGVSGSIPSLDKLGKTSFIKLKEKLKTKLLAIASEIVIMAAKRSLVQAKKI
                     TVDLNRQTDFIASAGFIYTSDQDKACHEILQDFQSGKVMDRLLSGDVGFGKTEVAMNA
                     IYPVVKSGFCAFLFAPTTLLSHQHYKTLKKRFDPFDIKVFKLDRFTSSAEKKQVLQNL
                     KENKACVVVGTHALLSVECENLALVIIDEEHKFGVKQKEKLKEITQNSHILSMSATPI
                     PRSLNQALSSIKSYSVLQTPPEDRMDVRTFVKENDDALLKEAIARELRRGGQIFYIHN
                     HIASIEQCKKHLLELFSTLRILILHSKIDAKMQEEEMLKFENKEYDLLLSTSIVESGI
                     DLPNANTIIVEKSDRFGMADLHQLRGRVGRSDKQGYCYFLIEDKNAITKDALKRLVSL
                     ESNSFLGAGSILAYHDLEIRGGGNLLGVDQSGHIEQIGYSLYLKMLEDELNALSKNEV
                     DQKENKLDLKLNVNAFLNSELISEDRLRLELYRRLSKCEQVHEVYEIESEIEDRFGKL
                     DIYTKQFLSLITIKILALNKFKSISNYEQNIQFTALNDEKELIKAKSKDDDDILEAIL
                     THLRKA"
     gene            13730..14491
                     /locus_tag="RJ239_001042"
     CDS             13730..14491
                     /locus_tag="RJ239_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7331170.1"
                     /translation="MDWNKTYAAIYRARKDYLKPIFEIDPIALKDLVGMESQKKALYE
                     NTLNFIQDKGANHALLWGSKGTGKSSLIKAIFNEFKEQGLRLVELNKEDLFALADIID
                     EIRLENFKFILFCDDFSFEKGDDSYKFLKPLLEGSIEKAPNNVIIYASSNRRHLLSES
                     ITDNLDTQITHTELHLSDAAEERLSLSDRFGLWLSFYQGNLEEYLKMIDFYFKDYSCD
                     KELLHAKAKEFATLRASRSGRTAKQFYLAFKENFK"
     gene            14488..15174
                     /locus_tag="RJ239_001043"
     CDS             14488..15174
                     /locus_tag="RJ239_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III domain-containing protein"
                     /protein_id="HDV7331171.1"
                     /translation="MTGAQIFTKLLNLDLNYHDFDWLENQGLSEFELLISVVLTQNTN
                     WKNVLKALENLKKENIASLEQINTLSNLELATLIKPSGFYNTKAKRLKGLVESIINTY
                     ENLENFKTNVSRKWLLNIKGLGFESVDGILNYLCKREILVVDSYSLRLAFHLGYEFEN
                     YEELREFFQSGIESEQENLCKILGRKCELYELYQIFHALIVAFAKQSFKGQKLSPKGE
                     EWIKILKEDL"
     gene            15171..15983
                     /gene="thiD"
                     /locus_tag="RJ239_001044"
     CDS             15171..15983
                     /gene="thiD"
                     /locus_tag="RJ239_001044"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HDV7331172.1"
                     /translation="MKAKGSELIPVLTIAGSDCSGGAGIQADLKTFSAHNLFGMSVVL
                     SVVAENTARVISVHDIPTQSVDEQMLAVFEDIVPKATKIGMIGSCELMSCVAKNLSEF
                     KPQNIVIDPVMFAKNGYALMPQENCDFFKQTIVKFADILTPNIPEAEFLCGFKIANEE
                     QMIKAAKHLCSLGAKAVLLKGGHSEINANDVFYDGKEIYILKGERIETKNTHGTGCTL
                     SSAIASNLAKGKDLFHAVSEAKEYVRNAIYYSLNLGKGCGPTNHFFKFLDEK"
     gene            15973..16605
                     /gene="thiE"
                     /locus_tag="RJ239_001045"
     CDS             15973..16605
                     /gene="thiE"
                     /locus_tag="RJ239_001045"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDV7331173.1"
                     /translation="MKNKLDLSLYLVATKGSKSEECFLNTLENAIKGGVSIIQLREKE
                     LNAREFYKLGLKVQKLCKSYKIPFLINDRVDIALALDADGVHLGQEDLEAKLARKLLG
                     DEKIIGLSLKKLEQLEFIQGVNYLGCGAIKATPTKESSLLSLELLSQICDKSPIGVVA
                     IGGIDKEALVELKGINLSGVAVVRAIMDAKDAFLAAKELKRKIYENLSLK"
     gene            16583..17212
                     /locus_tag="RJ239_001046"
     CDS             16583..17212
                     /locus_tag="RJ239_001046"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HDV7331174.1"
                     /translation="MKIYLLNETPFEGVENLILNEIVFYDFSVDLSLYDALICTSKNA
                     LKALQHAKITLNFKLNLYAVGQSTAQYAKNLGFKKIKIPSKAYGKDLFLEFKEELKMQ
                     KCLYLRAKNIVSTLNLDLKNVGVDLDEMIVYENVFKKGDKKLIHPAIFIFTSPLSVEN
                     FLKFYSLKEEDKVVVIGQSTAKKLLNFKNLYICENQSLLNCVKLAKTLV"
     gene            complement(17209..17661)
                     /locus_tag="RJ239_001047"
     CDS             complement(17209..17661)
                     /locus_tag="RJ239_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331175.1"
                     /translation="MKKAYVLIWTIFLILLISLWMSLTLNISSYTPKIIQDSYYYLQA
                     QILSHNATQFSKYFLYQAKQENKECLDNIYFNYTKALIKIKYFYPIAQCVNFKFSNFN
                     PDANLSKDGVIIAHISIALNRDKNVNDEILLTKSIIIYPKENFWNLKN"
     gene            complement(17658..18320)
                     /locus_tag="RJ239_001048"
     CDS             complement(17658..18320)
                     /locus_tag="RJ239_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331176.1"
                     /translation="MSKAFTLFELIISLILFTFITSLLSKPLMDFYHLNFTALHTNNL
                     ITQAHLNLLKIEKLIQNCINITFSQNTLKCLLKDELISLKDNKLYLINSALILENNHT
                     LYSPHSDFKTQLQNRKDLYNDNEHISYAYKINKIEKISILENGISANFTGSFIPLQAQ
                     LVIKLQNEELIYEIKPKFNEQLNQQGLISKNISSFNLQNNKLKICLKRQTKHCLEKRI
                     LL"
     gene            complement(18317..18619)
                     /locus_tag="RJ239_001049"
     CDS             complement(18317..18619)
                     /locus_tag="RJ239_001049"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HDV7331177.1"
                     /translation="MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERL
                     YKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDGIFQFQKLYFQDQNYSVYFKE"
     gene            complement(18616..19347)
                     /locus_tag="RJ239_001050"
     CDS             complement(18616..19347)
                     /locus_tag="RJ239_001050"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HDV7331178.1"
                     /translation="MLYILANGSMATALAYGLKDDYEICIVGRSIEKLQALAKEGFKT
                     LLYKDFNIEGKDVILAFKPYALENIAQMLKGQARILISVLANVDFEKLQTIKAQNYVR
                     IIPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
                     FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSNALLEHEHPAIIKENICSPGGVTI
                     KGIKILEQKGIRGSFFEAINASSAK"
     gene            complement(19347..19736)
                     /gene="fliW"
                     /locus_tag="RJ239_001051"
     CDS             complement(19347..19736)
                     /gene="fliW"
                     /locus_tag="RJ239_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliW"
                     /protein_id="HDV7331179.1"
                     /translation="MTLAVKCPILGFEETKNMEFSTIDEVFVRLKSLDGKDFSFVLIN
                     PYLIRPDYEFDIPTYYQELLSLTPESNMKIFNIVAIAKSIEESTVNFLAPVVINLDNN
                     TMVQVILDTVNYPDFFQADQIANYIKK"
BASE COUNT         7190 a         2296 c         3543 g         6761 t
ORIGIN      
        1 ctttggataa atttttccaa tctttgctta aaagcttttt agggagtata actatattct
       61 ctttgccatt tgtagcatga taaacactaa ccccatattt acttgcataa aatttcatta
      121 agagttgctg gagtttgtat tcgctactat tattaaacca agcattgttg cttagggcta
      181 taataatttg tgaattttga tagttttgtt ctttggtagc ttcataacaa attgcatttg
      241 tgataatttg attatctaat ttatatttgc tttgtatagg acctttggaa aattcttcaa
      301 tatttttgag aaaatatttt tttgttaagt ctttaaaaaa tggaatttct tcaccaaagg
      361 gaactaaaaa atgcttattt aaaatataga cattgccttt tttaaagata taagtgctat
      421 tgtaagtatg ctctttttca acatgaaatg ctcctgtaat aatggtgatt ttataagata
      481 attctttaag cataagctca tatttggtat tttttaaatc aaaagcaaaa gcggtttcag
      541 gcaagattac aagttctttt ttttcattta tagcttgaag tatatcttga attaagatat
      601 cagaatttga ttttaaattt tcttgtaaaa atttttgatc ttgagagata ttagtattga
      661 tgagtttgta gtttaaatta agagtttgag cttgtttttc attatattga aatccactaa
      721 agaataaaat aagaacaatt gctattttat aatatcttga tatataaccc tcatagatga
      781 aatatgctat taaaaatatg caaataatgc cacgataact tgggtcaaaa aaaccataaa
      841 ctgtaaaaat cccccaatta aaccaatcaa atcctaaagg atggataaaa cttatgcaaa
      901 aaattccaca aagccttaaa aaatcaaatt ttaataaata acataatcta aaaagtaacc
      961 cataaataaa accaatgata attggtataa ttggtactaa atagtttaga ttaaaataaa
     1021 ttgaagataa accaatccac caaaaccaaa gaatccctac aaaaaaacct atccaaaaat
     1081 attgtttaga agttttactt tttagaagta aaactaaccc ccaaatagct aaaaatggac
     1141 taatggtttg tgtaaaaata ttttcaaaaa atgatagata aatagaattt gaaagtaaaa
     1201 ttgcaataaa aaagactttt attattttaa aaatgataga attagtgttt aatttttttg
     1261 gaataaagga aaaatatggc agaaaattca attttaactt cattgttacc tcttgtagcg
     1321 ttatttgcaa ttttttattt cttggtgatc agaccgcaac aaaaacaagc aaaagcacat
     1381 aaacaaatgc ttgagtcttt gcaaaaagga gataaaatca tcactaatgg cggacttatt
     1441 tgtgaagtcg taaaaccaga ggaggatttt atcaaagtta agcttaatga agacaatgtt
     1501 actgcaaaaa tttcaagaga atttatagca aagaaaattg atgcgtaatt ctaaaatcaa
     1561 ttatcgcttg attattttta tagcggtatt tatttttgga gtggcttttt cactcccttc
     1621 ttttttgcag tcagaacgtg gtgcgaagat taatttaggg cttgatttgc aaggtgggct
     1681 ttatatgctc ttaggtgtag ataatgaaga agctgtaaaa tctaaaataa aatcaattgc
     1741 atcttcattg agttattctt ttaataaaga aaatatttta aatgatggct taaataccca
     1801 tgatgatatt ttagaattta ctttgcttga taatgcagat attgcaaaag ttgaaaattt
     1861 gcttaaagaa ataaaaggaa ttaatataca aagtgaaaat atgcactata aaatttcttt
     1921 tacctcaaaa gaagtaaaaa atatagaaaa ttttgcactt ttgcaagcag ttgaaaccat
     1981 aagaaatagg cttgatcaat ttggtttagc agagccaaca gttgctaaac aaggtgatga
     2041 taagattttg gttgaacttg cagggattaa aaccaaagaa gatgaactaa gagcaaaaga
     2101 acgcatcaca aaagcagcac atttgcaact tatggaagtt gatgattcta aaatgggtca
     2161 agcttctaca atgagcgatg ctgaggctgc gagttatgga ctgattttag tgcctgattc
     2221 tagaaatcca aatttaaaat ataccttaaa aagtatacct attttagatg gatctatgct
     2281 tactgatgct agagtaggac ttagcgataa gagtaattat cctgtgatta attttacttt
     2341 aaatgccgag ggttctaaaa aatttgctga ttatacagga gcaaatgttg gaaagcgtct
     2401 tgctattgta cttgataata aagtatattc tgctccatct atcaatgaac gcataggcgg
     2461 aggtagtggg caaatcagtg gagcttttac tcaagaagaa gcacgcgatg tggcggtagc
     2521 tttaagaagt ggagctttgc ttgcgcctgt aaaattactt gaacaaagaa gcataggacc
     2581 atctttaggt gctgatagta ttaaaatgag tatgatagcc ttaatcggtg catcagtttt
     2641 tattgtagta tttatgatga tgtattacgg tgtggcagga atttttgcaa atattgcaat
     2701 gctagttaat gttttggtag tagttgccgt tatggctatg tttggagcaa ctttaacttt
     2761 accagggatg gcaggacttg ttttaactgt gggtatggca gtagatgcaa atgtgattat
     2821 caatgagcgt atacgagaac tcttgcgaga tggagtaaat ataagagtta gtatagaaca
     2881 aggttataaa aatgctatga gtgcgattat agattcaaat atcacttctt tagttacttc
     2941 ggtagcgctt tatgcctatg gaacaggagc agttaaaggt tttgctgtga ctttgggaat
     3001 tggtatcgtt gtttctatga ttacagctat tttaggaact catggaatgt ttgattattt
     3061 tatgcaacgc atagaaaaaa ataataatac aagattttgg tttggttata ggagaagata
     3121 atgcagtttt ttagcgaaaa gaaaatttat gattttatga gaatgcgttt tgctgctatt
     3181 tccctttctt ttattttgtt ttttggttct atttatttac tttgggatag gggtttgcaa
     3241 tatggcattg attttagcgg aggaacttta gttcagctta aatatgaaaa tgcagctcct
     3301 ataacgcaaa ttcgagaaat tttagaaaat caaggaactt ttcaaaattt atctgtaact
     3361 gagtttggaa gcaatgaaga agtaactata cgctttttag gaagtaatga taatgtaagc
     3421 aatgatatag gtgagcatat aagcactctt ttaaaggata cgggaaaatt tgaagtgcgt
     3481 cgtgctgatg tggtaggtcc aaaagtaggt gatgaactta gaaataaagg acttatggct
     3541 atagctgtat ctttgatagc aattttaatt tatatagcgt tgcgttttga gtggcgtttt
     3601 gctcttgcgg ctataatcag tgaaattcat gatgttgtga ttactttagg agcaatttct
     3661 ttatttaaaa ttgatgtcaa tctagatact ttggctgctg ttttaactgt gcttggatac
     3721 tctttgaatg atacaattat tatttttgat agaatcagag aaggtattaa aacaagtaaa
     3781 aaaaccgaac ttgcacctat tattaatgaa agtgtttcag caactttatc aagaacggtt
     3841 ttaacttcag ggttgacttt agcaaccgtt gtgatacttt atttctttgg cggggaaatg
     3901 atacaaggat tttctttggc tttaattgta ggtattatag cgggaacttt aagctctatt
     3961 tttgttgcaa gtccgacatt attatggttt aaatttagtg tgcttgagtt tagaaataaa
     4021 gaaattgaaa aagcaaaaag aaaacaagat aaagaacgca atcgtgcaat gtatgaaaaa
     4081 ggaactgtgt aaggagaatt tatggcttat gaagcaagtt taatagaaaa aaaatggcaa
     4141 aaaatttggg atgaaaatga atattttgag ccaaaagatg acttaaattt gcctaaaaaa
     4201 tatattttat cgatgtttcc ttatcctagc ggacgcattc acatggggca tgtaagaaat
     4261 tatactatag gtgatgcttt agcaagatat tatcgcaaga taggttttaa tgttttacat
     4321 cctataggtt ttgatagttt tggcatgcct gctgaaaatg cagctattaa acataaaatt
     4381 catcctaagt catggactta tgaaaatata gcttatatga aaaaagaact tttttcttta
     4441 ggtttttctt tttctaaaaa aagaatgctt gctacttcag atccacttta tacaaaattt
     4501 gagcaagaat tttttattaa gatgtttgaa aaaggtttga tttacactaa agaagcaaat
     4561 gtaaattggt gtgaacaaga tcaaacggtt ttggctaatg agcaagttga agacggaaaa
     4621 tgttggcgtt gtggtcatga agtggtgcag aaaaaaatgc caggttatta tgtaaaaatt
     4681 actgcttatg ctgaggaact tttaaaagat ttagaagaat taaaagataa atggcctaat
     4741 caagttttaa ctatgcaaga aaattggatt ggtaaaagcg aaggtttgga attttcttta
     4801 aatttagacg aagaaagtaa gcaaaaaacc aaagaaagtt ctttagaagt ttttactaca
     4861 agagcagata caatttatgg agtttcgtat atcgctttag ctccagaaca taagattgtt
     4921 caaaatttgc tttcacaaaa tttattaaat caagatgtat taaataaaat caaagttatt
     4981 caaaatcaaa gcccaagaga aagacaaagt tctgaaaaag aaggttattt tttaggaatt
     5041 tatgccattc atcctttaag cggagaaaaa attcctttat gggtggctaa ttttgtcttg
     5101 gctgattatg gtagtggagc ggttatggct gttccagctc atgatgaaag agattttgaa
     5161 tttgcaacaa aatataatct tgccatcaaa caagttattc aaactcaaga aaatttacct
     5221 tatatgcaaa aattaggaaa attaattaat agtcaagaat ttgataatct tgattgtaat
     5281 gaagcaagat taaaaatcat ttctcagttt gaagctaaaa atataggaaa aagggttgta
     5341 aattttaaaa ttcgtgattg gggtgtttcg cgtcaaagat attggggtgc gcctattcct
     5401 atgattaaat gtcaaagttg tggtatagta cctcaaaaac tagaaaattt acctattact
     5461 ctgcccgaag atgtgcaaat tacaggtgag ggtaatccac ttgataaaca tccaacttgg
     5521 aaaaattgta tctgtccaaa atgtggtaaa gaggctcaaa aagaaagcga tactttagat
     5581 actttttttg aaagttcttg gtattttgca cgttttgcaa gtgatgagaa aacttggcag
     5641 gaaaaagctt tagatgaaaa aagtgtaaag tattggatga gtgtggatca atatataggt
     5701 ggtattgaac atgcaatctt gcatttactt tatgcgagat ttttccaaaa agctttaaga
     5761 gatttgggtt atttaacaca aaatgaacct tttgatagac ttttaactca gggtatggtg
     5821 ttaaaagatg gtgctaaaat gtcaaaatca aaaggcaatg ttgtagatcc tgatgagatt
     5881 atagaaaaat acggtgctga taccgcaaga ctttttatac tttttgctgc gcctccggct
     5941 aaagagcttg aatggaatga tgatgcggtt gaaggggctt atagatttat ttgcaaactc
     6001 tatgataggg cgcaaaatgt taaaaaaggt gagcttgtag aattaaaaca agaaaattta
     6061 aacaaagaag aaaaatatgc aagattaaag gtatatgaag ctttgaaaaa atcttttgaa
     6121 gtttatcatc aaagttttgc ttttaatact ttaattgcag cttgtatgga agctttaaat
     6181 gctttagcac tttgtaaaaa tgaagctttg gagcaagagg ctttttatat tattttaaat
     6241 attttagagc ctattattcc tcatgtttgt tttgagctta gcgaggagct ttttaaatgt
     6301 aaaaatttca aaaaattaga acttaaagaa gaggtttttg taaaagatac tttaaattta
     6361 gctgtaagta ttaatggtaa aaaaagggct gaatttgaaa tttcaagtag tgcgagcaaa
     6421 gaagaaattt tagcttttgc aaaagaaaat actgctaaat ggcttgaagg taagagtata
     6481 gttaaagaaa tttatgtgga aggaaagcta gttaatctag tgattaaatg aaaaagattt
     6541 taattttttg tataggttta tttttaggtg cttgtggata tattcctaca tcaaaaatcg
     6601 ctaataatat tttcgatgag aaggtttatg ttaatgttga attaagtcaa caagacccaa
     6661 aaaatagtat ctatgttgcc gatactttaa aagaaatggt aatttcaaaa ttagggcgta
     6721 aacttgcttt aaaacacgag gcagatgatg taattaatgt taaaatgaat aatttagaat
     6781 ttattccttt agcttatgat aaaaatggct atgttattag ttataaagct aaattaaatt
     6841 tagattttaa tgttgtcttt aaagatggtt caagtcaggc ttttagtaca agtggaagtt
     6901 ataattttga aatttctcca aatagtatta ttagtgattc tgcaaggtat gaggctattc
     6961 gagcagcttc aagcgaggca tttgatgagt ttatttccgt aattgctatt aaagggcaaa
     7021 aacgtgattc caaatactaa tgaaatagca aagcaaactt taattgcatt aaaagaaaga
     7081 aaactaaaac caactcctga aaattatacg gaaatttttg aagaattatc tttaaaatat
     7141 ggtatcacaa gctcaaataa agctaaactt gacaaataca aaaccttgct tttgccgatt
     7201 tatcaacaag aattaaattc taaaactata agaagtttag aagaactaat tagtttttta
     7261 atttctgttt taaatagaca aagcggaaaa caatttagtg aattttttga ttttttatat
     7321 accatatcta aaactttgca aataagtaag gataaaaaga taagagattt ggctaaggtg
     7381 acttcgatta gaatttctaa aactatggat agtgaaagta tttacttgct tactaaaaaa
     7441 tggaaagagc ttgaaagaaa ttatgatgaa aatgacttag aagaacaagc tcgtaaatat
     7501 ggcattagta aatatgatga ttatgatagc gtgattaaaa aactcttagt caagcttgaa
     7561 gagcgtagtt atgagcactt tagtgaatta ttatgcttgg gtttaaatcc ttcattggta
     7621 gaagatttaa aaattcaagg ttttatacaa aatttaacac aaaagccttt tgtaataggc
     7681 gaagaaaatt ttaaaaatga actaatggaa tttataaatc atcgcataat ggttgataat
     7741 atgtatgtcc aaaaaaattt aaattttttt aacgataatc taaaaaaaat ctatgaattg
     7801 cttgtcttac ttaataaatc gaatgaaaaa aatatggatt ttatcaatac cttaaaacca
     7861 gatgaaaatg gggaagtaaa acttagtttt gaggatttaa aactaaaatt taaacaactt
     7921 ggagaaaaaa ttacatcttt aaataatcaa attgaattca cgcaaagctt agaagagaga
     7981 gaggcttgga gtgttcttaa agagcttgat aaaatggatg aaaattttaa taagtataaa
     8041 gttaattatt ctttagcttt attttctata gtaaattacc gtttcattat ggaaaaatat
     8101 ggtatgggaa gtttgaatga aatttttgtt cgatttaaaa aaattttaaa agattcttgt
     8161 agtgaatttg atgaactgtg gatgatagat gaaaagagtt atttgattgt ttcgccagga
     8221 aaaagcaaag atgaaattac acagcttgta aatacaaatc ttaaaactat agaaaatttt
     8281 agatttattt ataagcaaga tattataact cctaaaattc acgtggctta tcttgataag
     8341 caaagtaagc caagtattaa tattttagat gagttaataa agcaaattgc agcggttaat
     8401 gaacaacata atgaaagttg agaatttttt agctcaaaaa agtataaatt acgataaaat
     8461 tgatcgtttt ttgatgttta gaatgtatga aaaatataag aaatatttta aaaatattcc
     8521 tataatccaa cttataggca caaatggtaa aggtagcacg ggtagatatt taacccaact
     8581 tttagaaaat ttaaattata aaatagggca ttatactagc ccgcacattt tcagttttaa
     8641 tgaaagattt tatcttgatg gtaagattgc gaatgatgaa gaattagaac aagctcatat
     8701 aagacttgaa gaaattttta aacaagactt gcaaaaatta agttatttcg aatatgctac
     8761 ttttttagct atgattttat ttcaaaaatg cgatttcatt gttttagaag caggagtggg
     8821 tggagaatat gatgctactt ctatttttga aagaagaatg agtattttta caagaattgg
     8881 atttgaccat attcaaattt tgggcaattc tttagaagat attgcaagaa ccaagcttaa
     8941 agttatggca cctatagcac ttataagtga tgagcaagag caaaatgttt taaatttagc
     9001 aaaaaaaatt gcttttttaa aaaaagctaa tttgcaagtt tcctccttaa atcctttttt
     9061 gaaagaaaaa tttgagattt attgtaaaaa gtttgtttta ccttattttt taaagcataa
     9121 tttaaagctt gcattaaagg cttgtgaaat tttaacttcg caagaaaaaa ccttagaagc
     9181 tttaaaaaag ttacaagagt taaatttaca aggaagatgc caagaaattt ctccaaattt
     9241 ttttgttgat gtgggtcata atcccatggc tgctaaggcc atgcttgata aatttcaagg
     9301 agaaaaaata aatcttattt ataatgctta tttggataag gatatttttc aaattttaaa
     9361 tacattaaag cctattattg atacaataca aatatataaa tataaaagtg cagaacgaaa
     9421 gctggccgat gatgaaattt atagtattgc atcaaagcta ggcatgcaat gtaaagaatt
     9481 tgtaaaatta gaagagaata aaaaaaatct agtttttggt tcttttatgc tggtagaaaa
     9541 ttttttaaag gagtggtgtg gtaaaaaata aattcactat taccattaca gatattaacg
     9601 gttcaagaca tttttattta aatcaaataa tcaaaaaaat agttttttat attattgctt
     9661 ttattgtttt atttttagtt tttagtggtt tttatatcaa atatctcgat agcaaactta
     9721 gtgatatcag tgaaaagcgt gaggagcttt tgaaaaaaag caaagaattg gaattatcta
     9781 attcgcaaat gcaaaaaagc atagaagaaa aaactcagca gtatgcagct atagaagata
     9841 aaatagcttc ttttgaagag gctttgggct tagaagcaga aaataatctt acaattagtg
     9901 caagacttga taatcttcag cttaccaatg agcagcaact tggaattttg gggcaaattc
     9961 ctaatggatg gcctattgaa aataaaggca ttacaggaaa ttttggctgg agagagcatc
    10021 cgcttttaaa aagaagggaa tttcatcctg gtattgattt aagagcagaa attggtactc
    10081 ctatttatgc accagcaagt ggagtagtgg aattttcagg ttatagtgat aatggctatg
    10141 gctataatgt aattttattg cataattttg gttttaaaac agtatttgct catatgatgc
    10201 gcaaagaagt ggtcaaagca ggtcaatttg ttaataaagg gcagttgata ggttatagtg
    10261 gcaatacagg tctttctacg gggccgcatt tgcactatga ggtaaggttt attaataaaa
    10321 ctttagaacc tttgtatttt ttaaatttgc aaagaaaaaa tatgaatgat ttttttaatc
    10381 aagaaaggag agttccatgg caatctttaa taaaggcggt atcagcccaa catccagctc
    10441 tagctcagaa acaacagtaa tttcttcagg tgcgagaatt gagggtaaat tttattttgc
    10501 ttctatgctt catgttgatg gagagttaag tggtattatt cattctgaaa gcattgtggt
    10561 tatcggaaaa aatggaaatt taaaaggtga attacaagca gataaaattg tagtaaatgg
    10621 gtgttttgaa gggcaacttg aggctaatag tttagaaatt ttagcgggcg gagttgttaa
    10681 tggtgatatt tcaacgcaaa aaatttctat agaaaatggc ggtcgcttta atggaactag
    10741 taaaattaaa gaagatacta tcaaacttat tgaaaataac aacgaagaat aatgcaagct
    10801 tcattttatg aatacttaca aaatccaaaa atttgtgaac tttttctttg taaagatgaa
    10861 aaacaagcag atttactcgc tcaagtttca cgatttaagg gtttaaaaac ctttgtttta
    10921 cctgatttta gagcgcagtt tggagatgat ttaagggctt tttctaaaga actttttgat
    10981 ctttgtaaga ttttaaatgc ttatcataaa gaagaagaaa aaaaaatcct tatttctcct
    11041 ttaaatactg ttttaaaaaa acttccttca aaaaaacatt tacaaaatta tcatatcgat
    11101 aaaaaacaaa attttgattt gaaatgtttt gaagatgaaa tttcaagatt gggatacgaa
    11161 tttgtagata tagttcagga taaaggtgaa atttcaattc gtgcggatat tattgatatt
    11221 ttttgtatca atgaagaaaa tcctattaga attttacttt ttggcgaaga gattgaaagt
    11281 ataagatatt ttgatttgca aagtcaaaag tctattccta acgaactaga acattttgaa
    11341 atttgtcctt ttttaaaata ttttgacaaa gaaaattatg aaatttttaa ggacaaatta
    11401 gaagattttc aaagcgatgc tttaatacat gatatcaatt ctttaggctt ttggtgtatt
    11461 gatgattttt ttgattattt agaacttgat tttttagctt gtgaaaagtt tgatattaat
    11521 gaatatgaaa aagatataag ttttgtgaat gcaaaaattt tacctcaagc taaaaaattt
    11581 aaagaattgc aaagttctta caataaagat ttttttgaat ttcataaaaa taaaaaaatc
    11641 acacttttag ctaaaaacga agctttattt aaagctttag agcttgaaga tactcaaaat
    11701 atccattttg taaaaagtga tttaaggctt aatcttatta gtcctgaaga gctaattatt
    11761 tctttaaatc aaaaagaaaa acaaaaaaca agaaaaaaag ctagtttgat tatagatgag
    11821 cttaaaaatg gggattatat agtacacgaa gattatgggg taggtaaatt tttaggtctt
    11881 gagatgatag tgataagcgg agcaaaaaaa gagtttgttg ctatagagta tcaaaattct
    11941 gataagcttt tattaccagt ggaaaatctt tatttgattg ataaatattt gggcgtgagt
    12001 ggatctattc caagcttaga taaactaggt aaaacaagct ttattaaact taaagaaaaa
    12061 ttaaagacta aacttttagc catagcttct gaaattgtta ttatggcggc taaaagatct
    12121 ttggtgcaag caaaaaaaat tacagtggat ttaaatagac agactgattt tatagctagt
    12181 gcgggtttta tttatacaag cgatcaagat aaagcctgtc atgaaatttt gcaagatttt
    12241 caaagtggaa aagtcatgga taggctttta agcggtgatg tgggttttgg aaaaacagaa
    12301 gtcgctatga atgctattta tccagtagtt aaaagtggat tttgcgcatt tttatttgcg
    12361 cctacgactt tgctttctca tcagcattat aaaaccttaa aaaagcgttt tgatcctttt
    12421 gatataaagg tttttaaact ggatcgcttt acaagtagtg cagaaaaaaa acaagtttta
    12481 caaaatttaa aagaaaataa agcttgtgta gttgtaggaa ctcatgcact tttaagtgta
    12541 gaatgtgaaa atttagccct tgttattatt gatgaagagc ataaatttgg agtgaagcaa
    12601 aaagaaaagc ttaaagaaat cactcaaaat tcacatattt tatccatgtc agcaacccct
    12661 ataccaagaa gcttaaatca agctttaagt tctataaaat cttatagtgt tttgcaaact
    12721 ccaccagaag atagaatgga tgtaagaact tttgtcaaag aaaatgatga cgcactttta
    12781 aaagaagcta tagcaagaga gttaagacgt ggtgggcaaa ttttttatat tcataatcat
    12841 attgcaagta tagagcaatg taaaaagcat ctattagaac ttttttctac tttgcgtatt
    12901 ttgattttac attctaaaat cgatgccaag atgcaagaag aagaaatgtt gaaatttgaa
    12961 aacaaagaat atgatttgct tttaagtacc tctatcgtag aaagtgggat tgatttacca
    13021 aatgcaaata ctatcatagt agaaaaaagc gatcgttttg gcatggctga tttgcatcaa
    13081 ttgcgtgggc gtgtaggaag aagtgataag caaggttatt gttatttttt aattgaagat
    13141 aaaaatgcta tcacaaaaga tgctttaaag cgtctagttt ccttagaaag taattctttt
    13201 ttaggcgcag gttctatttt ggcttatcat gatcttgaaa ttcgtggcgg tggaaattta
    13261 ttaggcgtag atcaaagtgg acatattgag caaattggat atagtttata tcttaaaatg
    13321 ttagaagatg aacttaatgc tttaagtaaa aatgaagtgg atcaaaaaga aaataaactt
    13381 gatttaaaac tcaatgttaa tgccttttta aacagcgaac ttatcagcga agatcgctta
    13441 agattagaac tttatagaag acttagcaag tgtgagcaag ttcatgaggt ttatgagatc
    13501 gaaagtgaaa ttgaagatcg ctttggaaaa cttgacattt atactaagca atttttatct
    13561 ttgattacta ttaaaatttt agctttaaat aaatttaaaa gcattagtaa ctatgagcaa
    13621 aatattcaat ttactgcttt aaatgatgaa aaagaactca tcaaggcaaa aagcaaagat
    13681 gatgatgata ttttagaggc aattttaacg catttaagaa aggcttaaaa tggattggaa
    13741 taaaacttat gcagcaattt atagagcaag aaaagattat ttaaagccta tttttgaaat
    13801 cgatcctatt gctttaaaag atttagtagg tatggaaagt caaaaaaaag cactttatga
    13861 aaatacttta aatttcattc aagataaggg agcaaatcac gcacttttat ggggatctaa
    13921 gggcactgga aaatcaagtt taattaaagc tatatttaat gaatttaaag aacagggctt
    13981 aagacttgtc gaattaaata aagaagattt atttgcctta gcagatatca tcgatgaaat
    14041 cagattagaa aattttaaat tcatactttt ttgtgatgat ttttcttttg aaaagggaga
    14101 tgatagttat aaatttttaa aacctttact tgagggaagc atagaaaaag ccccaaataa
    14161 tgtaattatt tatgcgagtt caaatcgtag gcatttatta agtgaaagca ttactgataa
    14221 tcttgatacg caaatcacac atacagaact tcatttaagc gatgctgctg aagaaagatt
    14281 aagcttgagt gatagatttg gtttgtggtt aagtttttat cagggaaatt tagaagagta
    14341 tttaaagatg atagattttt attttaaaga ttattcttgt gataaagagc ttttgcacgc
    14401 taaagctaaa gaatttgcta ctctaagagc aagtagaagt ggtcgtaccg caaagcaatt
    14461 ttatttagct tttaaggaga attttaaatg actggagcac aaatttttac caagctttta
    14521 aatttggatt taaattatca tgattttgat tggcttgaaa atcaaggatt gagtgaattt
    14581 gagcttttaa tttctgtcgt tttaactcaa aatacaaatt ggaaaaatgt cttaaaagct
    14641 ttagaaaatt taaaaaaaga aaatattgca agcttagaac aaatcaatac tttatccaat
    14701 ttagaacttg caactttaat caagcctagc gggttttata ataccaaagc caagcgttta
    14761 aaaggcttag tagaaagtat cataaacact tatgaaaatt tagaaaattt taaaacaaat
    14821 gtaagcagaa aatggctttt aaatatcaaa ggtttgggtt ttgaaagtgt tgatgggata
    14881 ttaaactatc tttgcaaaag agagattttg gttgtagata gttatagctt gcgtttggct
    14941 tttcacttag gttatgagtt tgaaaattat gaagaattaa gagaattttt tcaaagtggt
    15001 atagagagtg agcaagaaaa tttgtgtaaa attttaggga gaaaatgcga actttacgaa
    15061 ctttatcaaa tttttcatgc tttgattgta gcttttgcaa aacagagttt taaaggacaa
    15121 aaattaagcc ctaagggtga agaatggatt aaaattttaa aggaagattt atgaaagcaa
    15181 aaggaagcga acttatacct gttttaacta tagcaggaag cgattgtagt ggtggagcgg
    15241 ggatacaagc cgatcttaaa acctttagtg cgcacaatct ttttggtatg agtgtggttt
    15301 taagtgtagt agctgaaaat accgcaaggg tgatttctgt acacgatata cctactcaaa
    15361 gcgtagatga acaaatgctt gccgtatttg aagatatagt gccaaaggca actaaaatcg
    15421 gaatgatagg ttcttgtgaa ttaatgagct gtgtagctaa aaatttaagc gagtttaaac
    15481 ctcaaaacat agtgatcgat cctgtaatgt ttgctaaaaa tggctatgct ttaatgccgc
    15541 aagaaaattg tgattttttc aagcaaacca tagtaaaatt tgcagacatt cttacgccta
    15601 atattcctga agcagagttt ttatgcggtt ttaagatcgc taatgaagag cagatgataa
    15661 aagcagctaa gcatttatgc agcttggggg ctaaggcggt tttacttaaa ggcggacata
    15721 gtgaaataaa tgccaatgat gtgttttatg atggaaaaga aatttatatt ttaaaaggcg
    15781 aacgcataga aactaaaaat actcacggta caggttgtac gctttcttcg gctattgcta
    15841 gtaatttagc taagggcaag gatttatttc acgctgttag tgaagctaaa gagtatgtaa
    15901 gaaatgcgat ttattattca cttaatcttg gaaaaggttg tggtcctaca aatcattttt
    15961 tcaagtttct agatgaaaaa taaattagat cttagccttt atttggttgc tactaaggga
    16021 agtaaaagcg aggagtgttt tttaaatact ttagaaaatg ctataaaagg cggagtaagt
    16081 atcatacaac ttcgtgaaaa agagcttaat gcaagagaat tttataaact aggcttaaag
    16141 gtgcaaaaac tttgcaagtc ttataaaata ccttttttga ttaacgatag ggtggatata
    16201 gctttagcct tagatgctga tggggtgcat ttaggacagg aagatttaga agcaaaatta
    16261 gctagaaagc ttttaggaga tgaaaaaatc ataggcttaa gtcttaaaaa gttagaacaa
    16321 cttgagttta tacaaggagt aaattatcta ggttgtggag ctattaaggc aacgcctact
    16381 aaagaaagtt cgcttttaag ccttgagctt ttaagtcaaa tttgtgataa aagccctata
    16441 ggggttgtag ccataggtgg gattgacaaa gaagcacttg ttgagttaaa gggtataaat
    16501 ttaagcggtg tggctgtggt tagggcgatc atggatgcta aagatgcttt tttggcagct
    16561 aaagagctaa agcgtaaaat ctatgaaaat ttatctctta aatgaaactc cttttgaagg
    16621 ggtggaaaat cttattttaa atgagattgt tttttatgat tttagtgtgg atttgagttt
    16681 gtatgatgct ttaatctgca cttcaaaaaa tgctttaaaa gctttacaac atgcaaaaat
    16741 cactttaaat ttcaaactca atttatacgc tgtgggacaa agtacagctc aatacgctaa
    16801 aaatttaggt tttaaaaaga ttaaaattcc atcaaaggct tatggaaaag atctttttct
    16861 tgaatttaaa gaggagttaa aaatgcaaaa atgtttgtat ctaagggcta aaaatattgt
    16921 ttcaacttta aatttggatc ttaaaaatgt aggtgtggat ttagatgaaa tgattgttta
    16981 tgaaaatgtt tttaaaaaag gcgacaaaaa gcttatccat cctgctattt ttatattcac
    17041 ctctccttta agtgtagaaa attttttaaa attttacagc ttaaaagaag aagataaggt
    17101 tgtagttata gggcaaagca cagcaaagaa gcttttaaat tttaaaaatc tttatatatg
    17161 cgaaaatcaa agtcttttaa actgtgttaa gctcgctaag actttggttt aattttttaa
    17221 attccaaaaa ttttctttgg gataaataat aatgcttttt gtgagtaaaa tttcatcatt
    17281 gacgttttta tcacgattta aagcaatact aatgtgggct ataataacac catctttgct
    17341 taaatttgca tcgggattga agttggaaaa tttaaaatta acacattgtg caataggata
    17401 aaaatatttt attttaatca aagcttttgt gtaattaaaa tatatattat ctaaacattc
    17461 tttattttct tgctttgctt gatataaaaa atatttagaa aattgtgttg cattgtgact
    17521 taaaatttga gcttgaaggt agtaataact atcttggatt atttttggag tatagctgga
    17581 tatgtttaag gtcaagctca tccatagact tattagcagt attaaaaaaa ttgtccaaat
    17641 taaaacataa gcttttttca cagtaaaatt cttttttcaa ggcaatgttt tgtttgtctt
    17701 tttaggcaaa tttttaattt attgttttgc aggttaaatg agcttatgtt tttagaaatt
    17761 aatccttgtt ggtttaattg ttcattaaat tttggcttta tttcatatat aagttcttca
    17821 ttttgcaatt tgataactaa ttgagcttgc aaaggaataa aactacctgt aaaatttgca
    17881 gatataccat tttccaagat agatattttt tcaatcttat taattttata agcatagcta
    17941 atatgttcat tgtcgttata taaatctttt ctattttgga gttgtgtttt aaaatcagaa
    18001 tgaggtgaat aaagtgtatg attattttct aaaataagag cagaattaat aagataaagt
    18061 ttattatctt ttaggctaat taactcatct tttaaaagac attttaatgt attctgtgaa
    18121 aatgtaatat taatacaatt ttgtattaat ttttctattt taagcaagtt taaatgtgct
    18181 tgagtgataa gattgtttgt atgtaaagca gtaaaattta aatgataaaa atccattaaa
    18241 ggttttgaaa gtaagctagt tataaaagta aaaagtatta gtgatattat aagttcaaaa
    18301 agtgtaaaag ctttgctcat tctttaaaat aaacgctata attttgatct tgaaagtata
    18361 atttttgaaa ttgaaatata ccgtcattaa caaactgttc ttgtaaaact ataggtttta
    18421 aggctgaagt ttgaagtatg atggttttaa aaataggctt ttcatataat tcttcttgaa
    18481 gtttatagag tctttcaaaa atatttaaat tttcatagtt tttgtaaagt tgaatatagt
    18541 aataaaaaat gccaatgaaa attaaagata tgatcgttat agcactaatg ctttctataa
    18601 gtatgaaagc ctttttcatt tagcgctgct agcatttatg gcttcaaaaa aacttccgcg
    18661 aattcctttt tgttcgagta tttttatgcc ttttattgta actccgccag gggagcaaat
    18721 attttctttg ataatagctg gatgttcatg ttctagtaaa gcattagagc ttttaaataa
    18781 agagcgcgta agattgagac taagttcttt tgacaaacct tcataaactc cagcattagc
    18841 aatgctttct gctataagtg ctaaaaaagc aggagcgcag ccgctaatcg ccatagctgc
    18901 attcatttgt atttcattat ctaatttata agccgagcca aaagttttta aaatgtctaa
    18961 aatttcattt tcaaaatgag agtttttaag tatatatggt gtggttgaag ccttgtattt
    19021 agctgctgta ttgggtatta ttctaacata attttgagct ttgatggttt gtagtttttc
    19081 aaaatcaaca ttggctaaaa cagagattaa gatacgtgct tgtcctttta gcatttgagc
    19141 aatattttct aaagcataag gtttaaatgc taaaataaca tctttacctt ctatgttaaa
    19201 atctttgtaa agtaaggttt taaagccttc tttggcgagg gcttgaagtt tttctatact
    19261 tcttcctact atacaaattt cataatcatc ttttaaccca taggctaagg ctgttgccat
    19321 agatccattt gcaagtatat agagcattat tttttaatat aattagcaat ttgatcagct
    19381 tgaaaaaagt cgggataatt aactgtatct agtatcactt gtaccatagt attattatca
    19441 agattaatga ctactggagc tagaaaattc actgtcgatt cttcaatgct ttttgctatg
    19501 gctactatat taaaaatttt catattagat tcaggtgtta aagaaagaag ctcttgataa
    19561 taagttggta tatcaaattc ataatcaggt ctaatcaaat aaggattaat taaaacaaaa
    19621 gaaaagtctt taccatcaag acttttaagt cttacaaata cttcatcgat agttgaaaat
    19681 tccatatttt tggtttcttc aaaacctaag atagggcatt taacagctag ggtcatgttt
    19741 tctcctcaag ttataatgtt taatatttta acataaaata agcaataatc
//
LOCUS       DAPIVO010000034        19332 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.034, whole genome shotgun sequence.
ACCESSION   DAPIVO010000034 DAPIVO010000000
VERSION     DAPIVO010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19332)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19332)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19332
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.034"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            26..781
                     /locus_tag="RJ239_001052"
     CDS             26..781
                     /locus_tag="RJ239_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HDV7331180.1"
                     /translation="MKKILSIALVALVGLFLGACSDSKNKESNASVELKVGTAPNYKP
                     FNYKENSKLTGFDTDLVEEIAKKNGIKIVWVETNFDGLIPALKAGKIDMIASAMSATD
                     ERRQSVDFTKPYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGTLQENTAKAIKNAQ
                     VQSNKDLNIAVLALKNNKIDAIVADQDTAKGFLAENPELVSFYQETDGGEGFSFAFDK
                     NKQKNIIEIFNKGIDEAKTDGFYDTLIKKYELE"
     gene            complement(805..1443)
                     /locus_tag="RJ239_001053"
     CDS             complement(805..1443)
                     /locus_tag="RJ239_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HDV7331181.1"
                     /translation="MKLVLFDLDDTLIQGDSAKLWLKFCVEKGFLPQEYLEKIVFYQK
                     QYQEKKFDMDEFMTFFLQSVKGKNEDRISSLVDEFIKIYIKPYEKAKELIIKYQDQRC
                     IIISATAEFLVRKIASFLGVRESIAIKCERVGDKFSGKAYGIYSFKEGKVLRLKEYLG
                     KDYEKWMKDSYFFSDSINDLPLLESVSKAFVCNGDEKILKIAKERKYEILTF"
     gene            complement(1440..2429)
                     /locus_tag="RJ239_001054"
     CDS             complement(1440..2429)
                     /locus_tag="RJ239_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7331182.1"
                     /translation="MAYLKIKNFKKAYGDKIIFEDINFSAKKGEFITLLGPSGCGKST
                     LLRCIAGLSQINGGKISLNDKDLTKLSPQKRNIGMVFQNYALFPNLNVFENVAFGLKI
                     KKMDKKDIEKRVKKMLKLVELEEYAKTYPHKLSGGQMQRVALARSLVIKPDLLLLDEP
                     LSALDAKIRKYLRVQIKEIQKELELTTIFVTHDQEEALELSDTIILMNEGKIIQNSNA
                     NNLYLLPESHFVASFIGNYNILSPKELDSLGLKHDFKKDIALRPETIEISNEGLEAKI
                     KEKSLLGNIIRYRVRVQEIEFKVDTLNFSTHSTYEAGDKIALKFNLSLAKELK"
     gene            complement(2433..3212)
                     /locus_tag="RJ239_001055"
     CDS             complement(2433..3212)
                     /locus_tag="RJ239_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7331183.1"
                     /translation="MNENLSLKAKIYHYAVLFLVFLFLALPLMATFLYSISTSWGVSV
                     LPDDLTLKWYQELFHDERFLLALWHSLLVCVGSILLSVILVFPLVFVLNYYFLKLKAF
                     VNILIIMPFAVPPIVSCVGLLQLYADNIGGTAWILIFTYFTIALPFIYRALDNAISNV
                     NLNELITSNAMLGGSLMGAIFKLILPNLRNGILVAVFLSFSFLIGEFLYANILVGSAY
                     ETLQVYLYNIKNQSGHYSSALVIVYFVLIFITTFIASLIKE"
     gene            complement(3213..4052)
                     /locus_tag="RJ239_001056"
     CDS             complement(3213..4052)
                     /locus_tag="RJ239_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7331184.1"
                     /translation="MKEKFLAFLSILPFFIVFTFFMIAPLIWIVFNAFYVEEDEIYSL
                     ANFIHIFESKFYLQSIINSLQISFISSIFGLLIGLLASYSLFVLAPSKICKFLFSLNT
                     MISNFSGVPLAFAFIIVLGSNGVVNVFLKNLGIEPFVSVYANFGVNIVYVYFQIPLAI
                     LLLLPAFKSLENSHLNACKMLGGGNFLYWLKIALPLLAPALFGVFVILFANAFGAYAT
                     IYALSSGNFNVAPVRIAALIAGDINLDPYMASALSIIITIIMLVVTFIANFLSKKYNF
                     KVL"
     gene            complement(4049..4858)
                     /locus_tag="RJ239_001057"
     CDS             complement(4049..4858)
                     /locus_tag="RJ239_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HDV7331185.1"
                     /translation="MMSKAILVVLDGLNCKSASINMGYLNALCKENLGKFYSLECELP
                     SMSRPLYECLLTGVKPVLSGIINNKLSFSKQTSIFDLCKEQGLKAGGAAYHWVFELYN
                     KKEFIPSLHRHIEDENLTLPYGHFYYEDDYLDSHLFADGEHLRNKYNLDFTLIHSMNI
                     DDAGHKFGSHSIEYANKTKKVDILISEYLPTWLEQGINVIITSDHGMTEGKSHGGLSE
                     DEILVPFFTFGSAFSYENAKIKQDEICGSICEILGLKHDKRYNDEILKAKK"
     gene            complement(4855..6180)
                     /locus_tag="RJ239_001058"
     CDS             complement(4855..6180)
                     /locus_tag="RJ239_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
                     /protein_id="HDV7331186.1"
                     /translation="MKKVILTSAMLCSVLFGVQEYEANLAGHIIIDSKSTVKPPKDAP
                     DFFKTYGKFANIAREEKIGTFKSKGNRETDFYLPFKNQPIQGHSGIKYIPKKDVFWVI
                     SDNGLGKKYNSYDAMLYAHEFKFDFKNSKYELLKTVFFKDSDKKYPYPITTETTKERY
                     LSGVDFDTESIQVINDEFYIGDEFGPYLLHFDKNGNLKEVFDVYVEGKKLISPDNPSL
                     KFSDKPDGENEKFNIKRSKGFEAMASSKDGSKLYLLLEGSIYNNNAYENEKGKEYLRI
                     IEFNVKNKKFTGKTYKYFLEDKSHSIGDFNMIDDKYGIIIERDQKEGTKDKACKEGED
                     TKHCFNNVAQFKRIYKVKLDDKTHEAQKISYIDLLNIKDRNKISKKPLVNDKFVFPFE
                     TIEGVDIVDDSHIVVENDNNFPYSSSREPNKTDDNEFILLEVKDFLKSK"
     gene            complement(6191..7237)
                     /locus_tag="RJ239_001059"
     CDS             complement(6191..7237)
                     /locus_tag="RJ239_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HDV7331187.1"
                     /translation="MSKKFFLSLGLVALLFSNSQAIDENLIKAAQAEGRVNSLAMPDT
                     WANWKDTWADLKNLYDIEHSDTDMSSAQEIAKFKTEKKNASGDIGDVGASFGEIAVKQ
                     GVAQPFKTSYWDQIPTWAKDKDGNWLLAYTGTIAFIVNKDVVKDIPKTWQDLLKGNYK
                     ITVGDVSVAAQAVSAVLAANYALGGDEKDLSPALAFFNTLAKQGRLVNNDVSIANLEK
                     GEVEVGLVWDFNGLGYRDKVGKDRYEVLIPADGSVISGYTTIINKYAKHPNAAKLARE
                     FILSDKGQINLAKGYARPIRIDHITLPDDIKAKLLPSEQYKNARAIKDQKAWEKSAKE
                     LPQLWQEKVIVDMK"
     gene            7354..8337
                     /gene="corA"
                     /locus_tag="RJ239_001060"
     CDS             7354..8337
                     /gene="corA"
                     /locus_tag="RJ239_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HDV7331188.1"
                     /translation="MLYIYIKTQNALVQRINFNLDSQELPQNILWIDLLHPSAAEIAF
                     ISSEFNLEFPTKEEREEIELSAKYWEDNATITINAHFLVRDLKSDEEDRNLIKLRTEI
                     VTFATAKNILFTIRYNEFSTFEEIQARILASPKNFEDGFDIIDKMFEVRVEKDADLLE
                     WIDKEARRLRTSVLEKKDEYSYDEMLKDISSLQELNMRVRDSLFDKRRAMTSLLKSDK
                     IDKDIKQNLTIVLKDLNSLVEFSVSQLNILDNIQTILASQINIEQNKVIKIFTVATVA
                     MMPPTLIGTVYGMNFKFMPELELHYAYPIVLGVMVISIILPLVVFKKKGWL"
     gene            8358..8900
                     /gene="mog"
                     /locus_tag="RJ239_001061"
     CDS             8358..8900
                     /gene="mog"
                     /locus_tag="RJ239_001061"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HDV7331189.1"
                     /translation="MDTINIGILTLSDRASSGIYEDKATAEIERVLNSYIKNDIIYHK
                     ELIPDDYDLIIKKLLYLADEKKCDLIVTSGGTGPALRDVTPEATEAVCDKMMPGFGEL
                     MRLESLKYVPTAILSRQSAGIRNKSFIINLPGNPKAIKECLEPVFPAIPYCIDLIEGA
                     YIEANDEVIKVFRPKKKCQN"
     gene            complement(8897..9082)
                     /locus_tag="RJ239_001062"
     CDS             complement(8897..9082)
                     /locus_tag="RJ239_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein"
                     /protein_id="HDV7331190.1"
                     /translation="MFFKKKISQKQKEKPKIPINDVILDDRLCKFKNKVQKISKDEAS
                     ASLLARQLSRLIRANKF"
     gene            9209..10396
                     /locus_tag="RJ239_001063"
     CDS             9209..10396
                     /locus_tag="RJ239_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDV7331191.1"
                     /translation="MTLIAILCLYTALLSWISYAQIRFLEREKDKQAQILSEKDYQNA
                     ADIAIENEKFKLFSNFYNLIISIAWIGFGFLYLKELLILNNTRFENTLFLLSFLIITS
                     ILNLPLSIYESFIKDKAHGFSNMTVKLFIKDTMKSLILTLIFGFLILYALLFCYDFFG
                     TFWWIAAFIFAFCIIVIINLIYPTLIAPIFNKMEKLDDENLLKKISSLMKQCGFSANG
                     VYVIDASKRDKRLNAYFGGLFKSKRVVLFDTLLKALNERELLAVLGHELGHFVHKDII
                     KALFNGAITMFLLFFVFANLPEFVYLESHLEGVNGGVFALLFIFANIFSFLISPMLNA
                     LSRKNEFAADQHGAKVTSKEDMKNALIALARENKAFIKTSKTYTFFYLSHPSISDRIK
                     ALS"
     gene            10393..11208
                     /locus_tag="RJ239_001064"
     CDS             10393..11208
                     /locus_tag="RJ239_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDV7331192.1"
                     /translation="MTIKNALMEAKSSLKGYENEAVFILCEYLKKDKAWLFLNQDIKI
                     DHEPYFELIKRFKSGEPFEYIFEKVDFWGLEFKIKKGVLIPRYDSEILLFQILNLCKK
                     NTFNGILEIGFGSGILSIVLAKELGLKITACDINPKALELALENAKLYKVDHLIDFKL
                     CNFKQIKENYDFIFSNPPYIKNSYPIDIWVQKEPKEALFGGEKGYEILEEIIHFSLDK
                     KVKFLACEFGYDQKEILEKILYQNNFIVDFFKDEQGYNRAFIAKFTNMRYDKK"
     gene            11221..11691
                     /locus_tag="RJ239_001065"
     CDS             11221..11691
                     /locus_tag="RJ239_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HDV7331193.1"
                     /translation="MKAVNLFLLASIIGVELILGIVVAPTIFFPQNLIGEGVLSHFQS
                     GLMMTQIFIKMGYLLIFVSVVNFLYEIYSLIKDEMKFQIKFSKFMLSLLILILSLIFV
                     FYFTNTIIELQNLGENATKTQEFISIHNASEVVIKIILIMQVFLYFLSFKIAKK"
     gene            11730..12479
                     /gene="flaC"
                     /locus_tag="RJ239_001066"
     CDS             11730..12479
                     /gene="flaC"
                     /locus_tag="RJ239_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin C"
                     /protein_id="HDV7331194.1"
                     /translation="MMISDATMMQQNYYLNNAQKASDKALENIAAVRAISGVDSANLA
                     IADSLRSQSSTIDQGVANAYDAIGVLQIADASLTNISQSADRLNELSVKMNNAALNDS
                     QKGMLRTEATRIQESINDSFNNATYNGKNVFQTMNFVVGSGTETTNLNPLATDGLSID
                     SQDSITNFMDQLGSLRSEIGSGINAITSNINASVQNSINSKAAENNLLNNDMAKNVND
                     FNANYLKENAAAFVAAQSNMQLQSKIANLLQ"
     gene            12514..13146
                     /locus_tag="RJ239_001067"
     CDS             12514..13146
                     /locus_tag="RJ239_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HDV7331195.1"
                     /translation="MTLEQILEKTKNVRLVAASKYVDASIIEKLFDQGIVEFGENQVQ
                     ALAQKKENLDEKKLDIKWHFIGTLQSNKINLLIKQKPILWHSCNGIKIAKAMDKRLDY
                     KLNTLLEINSANENSKSGLDPNQAVEEYLQIQEECSNLNLCGVMSIGSHSQDKENIIK
                     SFETTFKIYEILQKHGAKICSMGMSNDFEIAIKCGSNLVRLGSILFKNLK"
     gene            complement(13158..16760)
                     /gene="dnaE"
                     /locus_tag="RJ239_001068"
     CDS             complement(13158..16760)
                     /gene="dnaE"
                     /locus_tag="RJ239_001068"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HDV7331196.1"
                     /translation="MSQFTHLHLHTEYSLLDGANKLKELALTLKEQGATSVAMTDHGN
                     MFGAIDFYQTMKAQGLKPIIGIEAYLHNHDELDDKSSRQRFHLCLYAKNEIGYQNLMY
                     LSSQSYIKGLYYYPRINKKLLEDYSEGLICSSACLQGEVNWHLNTYSERNVRFGAKGY
                     EAAKEAALWYKKVFKDDFYFEIMRHGIGDQRMIDDDIIRLSKELNIKIIATNDTHYTF
                     KERAAAHEVFMCIAMGKKLNDPDRMRHSVHEFYVKSPEQMSELFADIPEAIENTQEIA
                     QKCNLELNLGNPTPPNFKFTREYAKDHNIILPEETKEFSFDNDDMVFEELCKKGLEER
                     LKFIDESKHEEYKQRLEVEINIIKNMKFSGYMLIVHDFIKVAKDKGIPVGPGRGSAAG
                     SLVSYCLRITDLDPIPYSLLFERFLNPERVSMPDIDVDFCQDRRAEVIDYVIDKYGAD
                     KVAQVITFGKLLAKGVIRDVARVCDMSIQDADELAKLVPEELKITLDAAYEKEPKIKE
                     FIDRHPKGLEVWEYARALEGLNRNAGMHAAGVVISNESLWKKTPLFRQSKNDERHLVT
                     QYSKDHLEDVDLIKFDFLGLKTLTVINNAIKLIKKRYNKDIIWETIDVNDSKVYKTIQ
                     SGNTLGIFQIESGGMQSLNARLKPERFEDIIAVLALYRPGPMESGMLDDFIDRKHGLK
                     SIEYPFDSLEKVLEPTYGVIVYQEQVMQIVQIIGGFSLGGADVVRRAMGKKDPEKMKK
                     LKTDFADGAEKQGYDRAKAEDLWELIVKFAGYGFNKSHSAAYALITFQTAYLKTYYPS
                     EFMAALLTSEENNVDKIAVYIDEMKKMNIKLLPPSINKAIREFSALEQDGKDAIIYGL
                     GAIKSVGIPAVENLLEARQDGEFKDINDFLGKIDPTKINRRTLESLIKAGAFDEFGFT
                     RKALFDNMENLSEASRKMAEVRKNAASSLFGEEELTSGVQVNFTPKNEEFEVMEKLGY
                     EKEILGIYVSGHPLDRFYEQINAIDYVKSLDFESLKNNGEILSIGKIEDFKSMMSKNN
                     KRYGRIEILDYYSSFDATVFESNVEEIENIIKDENLKNNAYGFVLGFKAEGGEKPSFF
                     LKAIKDLQSLEDGEIKAIKKFGAKKDFKNKEENHFTAEPKEFEKNIIELDLTRLNREL
                     IYEIHEIARNAHNPNEKNNKKLVLKVISAGSCLLYHTDFIISDSIVEEISNKYA"
     gene            16988..17194
                     /locus_tag="RJ239_001069"
                     /pseudo
     CDS             16988..17194
                     /locus_tag="RJ239_001069"
                     /inference="COORDINATES: protein motif:HMM:TIGR02174.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SelT/SelW/SelH family protein"
     gene            complement(17207..17536)
                     /locus_tag="RJ239_001070"
     CDS             complement(17207..17536)
                     /locus_tag="RJ239_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family transcriptional regulator"
                     /protein_id="HDV7331197.1"
                     /translation="MKLYGIKNCNSVKKAMDALTQKGIVFDFMDIKKINQDILYTWLK
                     QKSFEELINTAGLTSKKLGLNKEKVKNLNEKELEKIVLENPSCIKRPIIEYEQNIYIG
                     KEYEKML"
     gene            complement(17533..18873)
                     /locus_tag="RJ239_001071"
     CDS             complement(17533..18873)
                     /locus_tag="RJ239_001071"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase class II"
                     /protein_id="HDV7331198.1"
                     /translation="MWAKNSWKNYPIKQQPIYPDQEEMNRVLARLEKLPPLVFAGEVR
                     NLQKSLARVCKKEAFLLQGGDCAESFENFGAVNIRDMFKILLQMAIVLTFAGGCPVIK
                     IGRIAGQFAKPRSSDFEELDGISLPSYRGDIINGFEFSEQARIPDPHRMLEAYYQSAI
                     TLNLLRGFAKGGLADLHEVHRWNLGFLKKSELHKQYTDISEKISQALAFMEACGINTS
                     NTPSLREVSVYTSHEALLLPYEEALTRVDSLSGEIYDCSAHMLWIGERTRALDEAHVH
                     FLSGVKNPLGVKIGPSASADDIIALANVLNPNNEEGRLNIIIRMGADKIINNLPKIFS
                     KLKSEGLNLVYSIDPMHGNTVKAGNFKTREFDKIMQEVRSFFEIAISEGVYPGGVHLE
                     MTGKDVTECTGGASNVTAQSLEDRYETQCDPRLNADQALELAFLIADLVKKTRK"
     gene            complement(18897..19310)
                     /gene="uraH"
                     /locus_tag="RJ239_001072"
     CDS             complement(18897..19310)
                     /gene="uraH"
                     /locus_tag="RJ239_001072"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HDV7331199.1"
                     /translation="MFSIKKTLLILASVPMFLSATEYQLSTHVLDITSGQPAPKVKVE
                     LYKLEANQQWKKVSEEFTEENGRIGDLLPYEKAENRAFGIYKLKFFTKDYYTSHKINT
                     FYPFVEVSFELSKDQKHYHVPITLSPFGYSTYRGS"
BASE COUNT         6802 a         3268 c         2607 g         6655 t
ORIGIN      
        1 aaacatttta tatcaaagga aaaaaatgaa aaaaatatta agcattgctc tagttgcttt
       61 agttggttta tttttaggtg cttgtagtga ttctaaaaat aaagaatcaa atgcaagtgt
      121 agaattaaag gttggaactg ctccaaatta taaacctttt aattataaag aaaactcaaa
      181 acttacaggt tttgatactg atttggttga agagattgcc aaaaaaaatg gtattaaaat
      241 tgtttgggtt gaaaccaatt tcgatggatt gattcctgct ttaaaagctg gcaaaatcga
      301 tatgattgcc tcagctatga gcgcaactga cgaaagaaga caaagtgttg attttaccaa
      361 accttactat atgagtaaaa atctttatct taagctaaaa aacaacgact ctcttcaaac
      421 gaaaaatgat ttagaaggta aaaaaatagg agttcaacta ggaactttac aagaaaatac
      481 tgcaaaagct atcaaaaatg cacaagtaca aagcaataaa gatttaaaca tagctgtttt
      541 agcactaaaa aacaacaaaa tcgatgctat tgtagctgat caagatactg ctaaaggttt
      601 tttagctgaa aatccagaat tggtaagctt ctaccaagaa acagatggag gggaaggctt
      661 tagttttgct tttgataaaa ataaacaaaa aaatattatt gaaatattta acaaaggcat
      721 agatgaagca aaaactgatg gattttatga tactttaatt aaaaaatatg aattagaata
      781 agcgtgaatt ttcacgctta tagcttaaaa agttaaaatt tcatattttc tctcttttgc
      841 aatttttaaa attttttcat caccattaca tacaaaggct ttgctaacag actctagtaa
      901 aggtaaatca ttgatagaat cactaaaaaa ataagaatct ttcatccatt tttcataatc
      961 tttacccaaa tattccttaa gtcttaaaac cttgccttcc ttaaagctat aaatcccata
     1021 agcttttcca ctaaatttat cacccacacg ctcgcatttt atggctatgc tttctctcac
     1081 tcccaaaaaa gaggcgattt ttctaactaa aaattcagcc gtagctgaaa ttataataca
     1141 cctttgatct tgatatttga ttataagttc tttagctttt tcataaggtt ttatataaat
     1201 ttttataaat tcatctacca aagatgaaat tctatcttca tttttaccct taacactttg
     1261 aagaaaaaaa gtcataaatt catccatatc aaactttttt tcttgatatt gtttttgata
     1321 aaaaacgatt ttttctaaat attcttgagg taaaaaacct ttttcaacac aaaatttaag
     1381 ccaaagttta gcactatcgc cttgtattaa agtatcatct aaatcaaata aaacaagctt
     1441 cattttaact cttttgctaa agaaagattg aattttaaag cgattttatc acctgcttca
     1501 taagtactat gagtgctaaa atttaaagta tctaccttaa attcaatttc ttgcactcta
     1561 accctatagc gtatgatatt gcctagcaat gatttttctt tgattttagc ctctaagcct
     1621 tcgttagaaa tttctatggt ttcaggacgc aaggctatat cttttttaaa atcgtgtttt
     1681 aaacccaagc tatcaagctc tttagggctt aaaatattgt aatttcctat aaagctagcc
     1741 acaaaatgag attctggcaa aagataaaga ttatttgcgt tggaattttg tatgatttta
     1801 ccctcattca ttaaaataat cgtatcggat aactctaaag cttcttcttg atcgtgcgtt
     1861 acaaaaatag tggtgagttc aagttctttt tgaatttctt taatttgcac ccttaaatac
     1921 ttacgaattt tagcatcaag tgccgataaa ggctcatcaa gtaaaagtaa atcaggttta
     1981 atcaccaaag atcttgctaa agccactctt tgcatttgtc cgcctgaaag cttatgtgga
     2041 taagttttag cgtattcttc aagctcgacg agttttaaca tttttttcac tcttttttct
     2101 atgtcctttt tatccatttt tttgatcttt aaaccaaaag ctacattttc aaaaacgtta
     2161 agatttggaa aaagagcgta attttgaaaa accataccta tatttctttt ttgaggactt
     2221 aatttggtaa gatctttatc atttaaagaa atttttcctc cattaatttg gctaagccct
     2281 gctatacacc ttaaaagagt ggattttcca cagccacttg ggcctaaaag ggttataaac
     2341 tcaccctttt tagcactaaa attaatatct tcaaaaataa ttttatcccc ataagctttt
     2401 ttaaaatttt taatctttaa ataagccatt tttcactcct taatcaaact agctataaaa
     2461 gttgttataa aaattaatac aaaataaact attaccaaag cactagaata atgcccactt
     2521 tgatttttga tattataaag ataaacttgt aaagtctcat aagcacttcc tacaagaata
     2581 tttgcgtata aaaattcacc tattaaaaaa gaaaaactta aaaaaactgc caccaaaatt
     2641 ccatttctta agttaggcaa gataagttta aaaatcgctc ccattaaaga acctccaagc
     2701 atagcattag atgtgatgag ttcatttaaa ttgacattag atatagcatt atctaaagcc
     2761 ctatatataa aaggtaaagc tatagtaaaa taagtaaaaa tgagtatcca agctgtgcct
     2821 cctatattgt cagcataaag ttgcaaaagc cccacacagc taactatagg aggtacagca
     2881 aaaggcatga taataagtat atttacaaag gcttttaatt ttaaaaaata ataatttagc
     2941 acaaaaacca aagggaaaac aagaatcaca gaaagtaaaa tactgcccac acaaacaagc
     3001 aaagaatgcc aaagagcaag taaaaatctt tcgtcatgaa aaagttcttg ataccattta
     3061 agcgtaagat catcaggcaa aacacttaca ccccaagaag tggaaataga atataaaaaa
     3121 gtagccatta aaggcaaagc taaaaataaa aaaaccaaaa acaaaactgc ataatgataa
     3181 attttagctt ttaaactcaa attttcattc atttaaagca ccttaaaatt atatttttta
     3241 gaaaggaaat tggctataaa ggtaacaaca agcatgataa tagttataat gatgcttaaa
     3301 gcactagcca tataaggatc aagattgata tcgcctgcga ttaaagcagc gattcttaca
     3361 ggagcgacat taaaatttcc cgaacttaaa gcataaatag tcgcataagc tccaaaagca
     3421 ttggcaaata aaatcacaaa aacaccaaac aaagcaggag cgagcaaagg caaagctatt
     3481 tttaaccaat ataaaaaatt gcctccacct aacattttac aagcatttaa atgtgaattt
     3541 tcaagacttt taaaagctgg aagcaaaagc aagattgcca aaggaatttg aaaatacaca
     3601 taaacaatat ttaccccgaa attagcataa acactaacaa aaggctctat gcctaaattt
     3661 ttcaaaaaca cattaactac accattgctt ccaagaacta taatgaaagc aaaagctaaa
     3721 ggaactcctg aaaaattact tatcatagta tttaaagaaa aaagaaattt acatattttt
     3781 gatggagcta aaacaaataa agaatagctc gccaaaagcc ctattaaaag tccaaaaata
     3841 ctagaaataa aactgatttg taaagaattt ataatgcttt gtagatagaa tttggactca
     3901 aaaatatgta taaaattggc taaagaataa atttcatcct cttctacata aaaagcatta
     3961 aaaacaatcc aaatcaaagg cgctatcata aaaaaagtaa aaactataaa aaaaggtaaa
     4021 atacttaaaa aggctagaaa tttttctttc attttttggc ctttaaaatt tcatcattat
     4081 atctcttatc gtgtttaagt cctaaaattt cacagatact gccacaaatt tcatcctgtt
     4141 ttatcttggc attttcatac gaaaaagcac taccaaaagt gaaaaaaggc actaaaattt
     4201 catcttcact taagcctcca tgacttttac cctctgtcat accatgatcg cttgtgatga
     4261 ttacattaat accttgttct aaccaagtag gcaaatactc agaaatcaaa atatcaactt
     4321 ttttggtttt attagcatac tcaatagagt gtgagccaaa tttatgtcct gcatcatcta
     4381 tattcataga atgtataaga gtaaaatcta gattatattt gtttcttaaa tgctccccat
     4441 ctgcaaataa atgagaatct aaataatcat cttcataata aaaatgtcca taaggcaaag
     4501 ttaaattttc atcttctatg tggcgatgta aagaaggaat aaattctttt ttattataaa
     4561 gctcaaaaac ccaatgataa gctgcgcctc cagcttttaa gccttgttct ttgcaaaggt
     4621 caaaaatgct tgtttgtttt gaaaaactca atttattatt aattatccca cttaaaacag
     4681 gctttacgcc tgttaataag cactcgtata aaggacgaga catactagga agttcgcatt
     4741 ctaaagaata aaatttgcct aaattctctt tgcaaagcgc atttaaatat cccatattta
     4801 tactagcact tttacaattt aagccatcaa gcacaactaa aatagctttg gacatcattt
     4861 actctttaaa aaatctttta cttcaagtaa aataaattca ttatcatcag ttttattagg
     4921 ttctctactt gaagaataag gaaagttatt gtcattttct acgactatat gagagtcatc
     4981 tactatatcc acaccttcta tggtttcaaa aggaaaaaca aatttatcat ttaccaaagg
     5041 ctttttagaa attttatttc tatccttaat atttaaaaga tctatataag aaattttttg
     5101 agcttcatga gttttatcat ctaatttaac cttgtaaatt cttttaaatt gagctacatt
     5161 attaaaacaa tgcttagtat cttcaccttc tttgcaagcc ttatctttag tgccttcttt
     5221 ttgatctctt tctatgatga tgccgtattt atcatctatc atattaaaat cacctatgga
     5281 atggctttta tcttctaaga aatatttata agtttttcca gtgaattttt tattttttac
     5341 attaaattct atgattctta gatattcttt acctttttca ttctcataag cgttgttatt
     5401 ataaatgctt ccttctaaaa gcaaataaag tttagaacca tctttagagc ttgccatagc
     5461 ttcaaagcct ttagaacgct tgatattaaa tttctcattt tctccatcag gcttatcgct
     5521 aaattttaaa cttggattat caggagaaat aagtttttta ccctccacat acacatcaaa
     5581 aacttctttt aaattcccat tcttatcaaa atgaagcaaa taaggaccaa attcatcacc
     5641 tatataaaat tcatcattga taacctgtat actctcagta tcaaaatcaa ccccacttaa
     5701 atacctttct ttggttgttt cggtggttat aggatagggg tattttttat cactatcttt
     5761 aaaaaaaact gtttttaaaa gttcgtattt tgagttttta aaatcaaatt taaactcgtg
     5821 agcataaagc atggcatcat aagaattata ctttttaccc aagccattat cgctaattac
     5881 ccaaaaaaca tctttttttg gaatatattt tatcccacta tgtccttgta taggttgatt
     5941 tttaaaaggt aaataaaaat ctgtttccct gtttccctta gatttaaaag ttccaatttt
     6001 ttcttctcta gcgatatttg caaatttccc ataagtttta aaaaaatcag gagcatcctt
     6061 aggaggtttt actgtacttt tagaatctat gataatatgc cctgctaaat tggcctcata
     6121 ctcttgaact ccaaataaaa cactgcaaag catagcactt gttaaaataa cctttttcat
     6181 ccaatctcct ttatttcata tccactataa ctttttcttg ccaaagttgt ggcaattctt
     6241 tagcgctttt ttcccaagct ttttgatctt tgattgctct tgcatttttg tattgctcac
     6301 ttggtaaaag tttagctttt atatcatctg gcaaggtaat atgatcaatt cttattggcc
     6361 ttgcataacc ttttgctaga ttgatttgtc ctttatcaga aagtataaac tcacgggcta
     6421 atttagccgc atttggatgt tttgcgtatt tattgataat agttgtataa cccgaaataa
     6481 cactaccatc agcagggatt aaaacttcat aacgatcttt gcccacttta tctctatagc
     6541 ctaaaccatt aaaatcccaa actaaaccca cttcaacttc acctttttca agattggcta
     6601 tacttacatc attatttaca agtcttcctt gtttggctaa agtattaaaa aaagctaaag
     6661 caggacttaa atctttttca tccccaccta aggcataatt agctgccaaa actgcactca
     6721 cagcttgagc tgctacactt acatcgccca cggtaatttt ataatttccc ttaagcaaat
     6781 cttgccaagt tttaggtata tcttttacta catctttatt gactataaaa gctatggttc
     6841 ctgtataagc taaaagccaa tttccatctt tatctttagc ccaagttgga atttgatccc
     6901 agtaacttgt cttaaaaggc tgagctactc cttgtttaac cgctatctct ccaaaagacg
     6961 cccctacatc ccctatatca ccgcttgcat ttttcttttc ggttttaaat ttagcaattt
     7021 cttgagctga actcatatct gtatcactat gttctatgtc ataaagattt ttaagatctg
     7081 cccaagtatc cttccagttt gcccaagtat caggcatagc taaagaattt accctacctt
     7141 ctgcttgcgc agctttaatc aaattctcat caatagcttg tgaatttgaa aacaataaag
     7201 caacaagacc taaacttaag aaaaatttct tactcatttt tttcctttca aaaaatattt
     7261 tggaaattta atgagtttta gaaacatttt agaaacaagt taatttttaa gcaaacaagg
     7321 ttataatttt aaagtcataa acaaggagcg atcatgcttt atatttatat caaaactcaa
     7381 aatgctttag ttcaaagaat caattttaat ctcgatagtc aagaactacc gcaaaatatt
     7441 ttatggattg atttacttca tccaagtgca gcagaaattg cttttatatc aagtgaattt
     7501 aatcttgagt ttcctacaaa agaagaaagg gaagaaatag agcttagcgc aaaatattgg
     7561 gaagataatg caacaataac catcaatgct cattttttag taagagatct taaaagtgat
     7621 gaagaagata gaaatttaat caagcttcgc acagaaattg ttacttttgc taccgctaaa
     7681 aatatcttat ttactataag atataacgaa tttagcactt ttgaagaaat tcaagcaagg
     7741 attttagcta gtccgaagaa ttttgaagat ggttttgata ttattgataa aatgtttgaa
     7801 gtacgcgttg aaaaagatgc ggatttacta gaatggatag ataaagaagc aagacgctta
     7861 agaacaagtg ttttagaaaa aaaagatgaa tatagttatg atgaaatgct aaaggatatt
     7921 tcaagtttgc aagagcttaa tatgcgcgta agagattctt tatttgataa gcgtcgcgct
     7981 atgacttctt tgttaaaaag cgataaaatc gataaagaca taaaacaaaa tctcactata
     8041 gttttaaaag acttaaattc tttggttgaa tttagcgttt cgcaacttaa tatcttagat
     8101 aatatccaaa ccattttagc cagtcaaatc aacatagaac aaaacaaagt cattaaaatt
     8161 ttcaccgttg caactgttgc catgatgcca cctactttaa taggaactgt ttatggtatg
     8221 aattttaaat tcatgcccga acttgaactt cactatgctt atcccatagt gcttggcgtg
     8281 atggtaattt ctatcatttt acctttggtt gttttcaaga aaaaaggatg gttataaaaa
     8341 tttattaagg agaaacaatg gatacaataa acataggaat tttaacccta agcgatagag
     8401 caagtagtgg tatatacgaa gataaagcca ctgctgaaat tgaaagagtg ttaaattcat
     8461 atataaaaaa tgatattatt tatcataaag aattaatccc tgatgattat gatttgatca
     8521 ttaaaaaatt actttatcta gcagatgaaa aaaaatgcga tttgattgtt acaagcggag
     8581 gtacaggtcc agcacttcgt gatgtaaccc cagaagccac ggaagccgtg tgtgataaaa
     8641 tgatgccagg ttttggagaa cttatgcgct tagaaagttt aaaatatgtc ccaacagcta
     8701 tactttcaag acagagtgca ggaattcgca ataaatcttt tatcattaat ttaccaggaa
     8761 atcctaaggc tataaaagaa tgcctagagc ctgtttttcc ggctatacct tactgtatcg
     8821 atttgataga aggtgcttat atagaagcaa atgatgaagt tattaaggtt tttcgcccta
     8881 agaaaaaatg tcaaaattaa aatttattag ctctgataag tctgcttaat tgtctagcaa
     8941 gcagacttgc cgaagcttca tctttgctta tcttttgcac tttattttta aacttacaaa
     9001 gtctgtcatc taaaatcaca tcattgattg gaattttagg cttttctttt tgtttttgtg
     9061 aaatcttttt cttaaaaaac attctttaat ccttttttat aaatatatac caacttagtt
     9121 gaaaagaata ttattttaga ttttaaacta ttaactttat ttcattattt taagctagaa
     9181 ttcgcaaaaa actaatcaag gaaaaataat gactttaatt gcaattttat gtctttacac
     9241 agcactttta tcttggattt cctatgctca aattcgtttc ttagaaagag aaaaagacaa
     9301 acaagctcaa attttaagcg aaaaagacta tcaaaatgca gcagatattg ccatcgaaaa
     9361 tgaaaaattt aaactatttt ccaattttta taatttaatc atcagtattg catggatagg
     9421 ttttggattt ttatacctta aagaattact tatcttaaac aacactcgtt ttgaaaatac
     9481 tttattttta ttatcttttt tgataatcac aagtatttta aatctacctt taagtattta
     9541 tgaaagtttt atcaaagata aagcccatgg tttttcaaat atgactgtaa aactttttat
     9601 caaagatact atgaaaagtc ttattttaac tttaatattt ggatttttaa tcctttatgc
     9661 tttgcttttt tgctatgatt tttttggaac tttttggtgg attgcggcct ttatttttgc
     9721 cttttgtatt atagtgatta taaatctcat ctaccctacc ttgatagcac ctatttttaa
     9781 taaaatggaa aaactagacg atgaaaattt actgaaaaaa atcagctctt taatgaaaca
     9841 atgtgggttt agtgcaaatg gggtttatgt tattgatgca agcaaaagag ataagcgttt
     9901 aaatgcttat tttggtggac tttttaaaag caaaagagtg gtgctttttg atacattatt
     9961 aaaagcctta aatgaaagag aacttttagc tgttttggga cacgagcttg gacattttgt
    10021 tcataaggat attatcaaag ctttatttaa cggcgctata actatgtttt tacttttttt
    10081 tgtttttgca aatttacctg aatttgttta cttagaaagt catctagaag gagtaaatgg
    10141 cggtgtgttc gctcttttat ttatctttgc aaatattttt agctttttaa tctctcctat
    10201 gcttaatgcc ttaagtagaa aaaatgaatt tgcagctgat caacacggag ctaaagttac
    10261 aagcaaagaa gatatgaaaa atgcattgat agctctagca agagaaaata aagcttttat
    10321 caaaacaagt aaaacatata cattttttta tctcagtcat ccaagtatta gtgatagaat
    10381 caaggctctt tcttgactat aaaaaatgct cttatggaag ctaaatctag cttaaaaggt
    10441 tatgaaaatg aagcggtatt tatactttgc gaatatctaa aaaaagataa agcttggtta
    10501 tttttaaacc aagatataaa aatagatcat gaaccttatt ttgagcttat aaagcgtttt
    10561 aaatctggag aaccttttga atatatattt gaaaaagtgg atttttgggg cttagaattt
    10621 aagataaaaa aaggcgttct aatccctcgc tacgatagtg aaattttact ttttcaaatt
    10681 ttaaatttat gcaaaaaaaa tacttttaat gggattttag aaataggatt tggaagcgga
    10741 attttaagca ttgttttagc caaagaactt gggttaaaaa tcacagcctg tgatatcaat
    10801 cccaaagcct tagaattagc tttagagaat gccaaattat acaaagtcga tcacttgatt
    10861 gactttaaac tttgtaattt taagcaaatt aaagaaaatt atgattttat tttttcaaat
    10921 ccaccttata ttaaaaattc atatcctata gatatttggg tgcaaaaaga acccaaagag
    10981 gctttatttg gcggagaaaa aggatatgaa attctagaag aaatcataca tttttccctt
    11041 gataaaaaag ttaaattttt agcttgcgaa tttggctatg atcaaaaaga aattttggaa
    11101 aaaattttat atcaaaataa tttcattgtt gattttttca aagatgaaca aggttataat
    11161 cgtgctttta tagctaaatt tacaaatatg cgttatgata aaaaataaaa ggagaaactc
    11221 ttgaaagctg ttaatttatt tttacttgcc tccatcatag gggttgaact catactagga
    11281 atagttgttg caccaacaat tttttttcct caaaatctta taggagaagg agtgttgagc
    11341 cattttcaaa gtggcttaat gatgacgcaa atttttatta agatgggata tttgctgatt
    11401 tttgtttcag tggttaattt tttatatgaa atttattctc ttataaaaga tgaaatgaaa
    11461 tttcaaataa aattttcaaa atttatgctg agtttgctta ttttgatttt aagcttaata
    11521 tttgtttttt attttactaa taccataatt gaactccaaa acttaggcga aaacgctaca
    11581 aaaactcaag aatttatcag tatccataat gcaagtgaag tggtgattaa aatcatcttg
    11641 ataatgcaag tttttttata tttcttaagc tttaaaatag caaaaaaatg ataaaatatt
    11701 aaataaatcc aaaagagaag gagtaggcca tgatgatctc tgatgcaact atgatgcaac
    11761 aaaattatta tttaaataat gcacaaaaag ctagcgataa agctttagaa aatattgcag
    11821 ctgttcgcgc aataagtgga gttgatagtg ctaatttagc tattgctgat tctttaagat
    11881 ctcaatcaag cactatagat caaggtgtcg caaatgctta tgatgctata ggggttttac
    11941 aaattgcaga tgctagcctt accaatatct ctcaaagcgc agatagactt aatgaacttt
    12001 cagtaaaaat gaacaatgct gcacttaatg attctcaaaa aggaatgcta agaacagaag
    12061 caacacgcat acaagaatcc atcaatgatt cttttaataa tgcaacttat aatggaaaaa
    12121 atgtctttca aactatgaat tttgtagtag gtagcggaac tgaaactaca aatttaaatc
    12181 cattagcaac agatggatta agcatagata gtcaagatag tattacaaat tttatggatc
    12241 aacttggaag tttaagaagt gaaataggct caggtatcaa tgccatcaca tcaaatatta
    12301 atgcaagtgt tcaaaatagc atcaactcaa aagcagctga aaataattta ctaaataatg
    12361 acatggcaaa aaatgtcaat gattttaatg ccaattatct aaaagaaaat gctgctgctt
    12421 ttgttgctgc gcaatccaac atgcagcttc aaagcaaaat tgctaattta ttacaataaa
    12481 ataagcccta aatagggctt attttttatc aaaatgactt tagagcaaat tttagaaaaa
    12541 accaaaaacg ttcgtcttgt agccgcaagc aagtatgtcg atgcaagtat aattgaaaag
    12601 ctttttgatc aaggtatagt agaatttgga gaaaatcaag tccaagctct agcacaaaaa
    12661 aaagaaaatc ttgatgaaaa aaaactagac ataaagtggc attttatagg aacgctacaa
    12721 agcaacaaaa tcaatctctt aatcaaacaa aaacctatat tatggcactc ttgcaatggt
    12781 attaaaatag ctaaagctat ggacaaaaga cttgattata aattaaatac tttattagaa
    12841 atcaatagtg caaatgaaaa tagcaaaagc ggtctagatc caaatcaagc cgtagaagaa
    12901 tatttacaaa tacaagaaga atgctctaat ttaaatcttt gtggcgtaat gagcatagga
    12961 tcacacagcc aagataaaga aaatattata aaaagctttg aaactacatt taaaatttat
    13021 gaaattcttc aaaaacatgg ggctaagatt tgctctatgg ggatgagtaa tgattttgaa
    13081 attgctataa aatgcggatc caacttggta agactcggaa gcattttatt taaaaatctt
    13141 aagtaaaaca atcttactta agcatattta ttagaaattt cctctactat actatcagag
    13201 ataataaaat ctgtatgata aagcaagcaa gatcccgcac taataacttt taaaacaagt
    13261 tttttattat ttttttcatt aggattatgt gcatttctag caatttcatg aatttcatag
    13321 attaattctc tattcaatct tgtcaaatct agctctatga tatttttttc aaattcctta
    13381 ggttctgcgg taaaatgatt ttcttcttta tttttaaaat ctttttttgc tccaaatttt
    13441 tttatagctt taatctcgcc atcttcaaga ctttgcaaat ctttaattgc ttttaaaaaa
    13501 aagctaggct tctcccctcc ttcagcttta aatcccaata caaaaccata ggcattattt
    13561 tttaaatttt catctttgat gatgttttct atttcttcta cattgctttc aaatacagta
    13621 gcatcaaacg aagaataata atccaaaatt tcaattctac cataacgctt attattttta
    13681 ctcatcatgg atttgaaatc ttcaatttta cctatactta aaatttctcc attgtttttt
    13741 aaactttcaa aatctaaact tttaacataa tctatggcat taatttgttc ataaaatcga
    13801 tctaaaggat ggcctgaaac ataaattcct aaaatttctt tttcatatcc taatttttcc
    13861 atcacttcaa attcttcatt tttgggagta aaatttactt gaacacctga agttaattcc
    13921 tcttcaccaa aaagagaact tgcagcattt tttcttactt cagccatttt acgcgatgct
    13981 tcgctaagat tttccatatt atcaaacaaa gcttttctag taaaaccaaa ctcatcaaaa
    14041 gcccctgcct taataagact ttctaatgtt ctacggttta ttttggtggg atctatctta
    14101 cctaagaaat cattaatatc cttaaattct ccatcttgtc ttgcttcaag taaattttca
    14161 actgcaggaa tacccacact ttttatagcc ccaagtccgt atataatagc atccttgcca
    14221 tcttgctcta aagcactaaa ttcacggatc gctttgttaa tcgatggagg taaaagttta
    14281 atattcattt ttttcatctc atcaatataa acagcaattt tatccacatt gttttcttcg
    14341 cttgttaaaa gcgctgccat aaattcacta ggataataag tttttaaata agctgtttga
    14401 aaagtaatca atgcataagc cgcagagtga gatttattaa aaccatatcc tgcaaatttt
    14461 acgataagct cccataaatc ctcagctttt gctctatcat atccttgttt ttctgctcca
    14521 tctgcaaaat cagttttaag ctttttcatc ttctcaggat cttttttacc catagcacga
    14581 cgcactacat cagcacctcc taaagaaaag ccacctataa tttgaacaat ttgcataacc
    14641 tgttcttgat aaacaataac cccataagta ggctctaaaa ccttttctaa actgtcaaaa
    14701 ggatattcta tactttttaa accatgcttt ctgtcgataa aatcatcaag cattcctgat
    14761 tccatagggc ctggacgata aagcgcaaga accgcaatga tatcttcaaa acgctctggt
    14821 tttaagcgtg catttaagct ttgcataccg cctgattcga tttgaaaaat tcccaaagta
    14881 tttccacttt gtatggtttt ataaactttg ctatcattta catctatagt ttcccaaata
    14941 atgtctttat tgtaacgctt tttaataagc ttgatcgcat tattgattac tgttaaggtt
    15001 ttaagaccta aaaagtcaaa ttttatcaaa tccacatctt ctaaatgatc tttagaatac
    15061 tgcgttacca aatgtctttc atcattttta ctttgtctaa aaagcggagt tttcttccat
    15121 aaactttcat tagaaattac aacacctgct gcgtgcatac ccgcattgcg atttaatcct
    15181 tctaaagctc ttgcatactc ccaaacttca agacctttag gatgacgatc gataaattct
    15241 ttgattttag gttctttttc ataagcagca tcaagagtga ttttaagctc ttcaggcaca
    15301 agtttagcaa gctcatcagc atcttgaata ctcatatcac aaactctagc cacatcacga
    15361 atcacccctt tagccaaaag tttaccaaag gtaatcacct gtgcaacctt atccgctcca
    15421 tatttatcaa tcacataatc aatcacttca gcacgtctgt cttgacaaaa atccacatca
    15481 atatcaggca tgctcacacg ctcaggattt aaaaaacgct caaaaagtag actataagga
    15541 ataggatcta aatccgtaat ccttaaacaa taagaaacca aacttcctgc agctgatcct
    15601 cttccagggc ctactggaat acctttatcc ttagccactt taataaaatc atgaacaata
    15661 agcatataac ctgaaaattt catattttta atgatgttaa tttctacttc aagtctttgt
    15721 ttgtattctt catgcttact ttcatcgata aattttaatc tctcttcaag tccctttttg
    15781 caaagttctt caaaaaccat gtcatcatta tcaaagctaa attcttttgt ttcttcaggt
    15841 aagataatat tatgatcttt agcatattct cttgtaaatt taaaattcgg tggagtggga
    15901 ttgccaagat taagctctaa attacatttt tgtgcgattt cttgtgtatt ttctatagct
    15961 tctggaatat ctgcaaaaag ctcactcatc tgctcaggac ttttaacata aaattcatgc
    16021 acactatgac gcattctatc aggatcgtta agtttttttc ccatggctat acacataaaa
    16081 acctcatggg cagccgctct ttctttaaaa gtataatgcg tatcatttgt agcaatgatt
    16141 tttatattta attctttaga aagtctgata atatcatcat ctatcattct ttgatcgcct
    16201 ataccatgac gcatgatttc aaaataaaaa tcatctttaa aaactttttt ataccataat
    16261 gccgcttctt ttgctgcttc atagcctttt gcaccaaaac gcacatttct ttcactataa
    16321 gtatttaagt gccaatttac ttcaccttgc aagcaagcag aagagcaaat aagaccttcg
    16381 ctataatctt ccaaaagctt tttattgata cgcggataat aatacaaacc tttaatataa
    16441 ctttgagaac ttaaatacat taaattttga tatccaatct cattttttgc atacaaacaa
    16501 aggtgaaaac gctgacgaga acttttatca tctaactcat catgattatg caaatacgct
    16561 tctataccaa tgataggttt taaaccttgt gctttcattg tttgataaaa atcaattgcc
    16621 ccaaacatat ttccatgatc tgtcatagcc acacttgtag caccctgctc ttttaaagtc
    16681 aaagctaatt ctttaagctt attggctcca tcaagcaaag aatattctgt atgtaaatgc
    16741 aagtgtgtaa attgactcat tttcttcctt tagtttttta aggcttattt taattttgat
    16801 aaaaattata aatttttctc gctgaatttg aaagaaattg accctaaatt tcaacttaaa
    16861 ttttacaaaa aggcaaaaat tcagccaaaa taaactataa taaaattaag attttaatct
    16921 taataaaaag aacttctcaa aggatgaaat gatgaaagta aaaattgctt attgcaatct
    16981 ttgaaattat cgcccacaag ctgcaagggt tgcagaagaa ctacaaagcg atttcaaaga
    17041 tgttgaagta gaatttgaaa ttggcggcag aggtgatttt atcgttgaag tagacggaaa
    17101 agttatcttc tctaaaacac aacttattaa ttgcgaaagt gaaagatttc catatcaaaa
    17161 tgaaattaat caattaataa aaaatagagt gtaatcaaac actctatcat aacattttct
    17221 catattcctt accaatatat atgttttgct catactcgat aataggacgc ttaatacaac
    17281 ttggattttc caatacaatt ttttcaagtt ctttttcatt taaattttta actttttctt
    17341 tgtttaagcc aagtttttta gaagttaatc cagcagtatt gataagttct tcaaaagatt
    17401 tttgttttaa ccatgtgtat aaaatatctt gattaatctt tttaatatcc ataaaatcaa
    17461 acacaatacc tttttgtgtt aaagcatcca tagctttctt tacagaattg caatttttaa
    17521 taccataaag tttcattttc tagtcttttt taccaaatct gcgattaaaa aagcaagttc
    17581 taatgcttga tccgcattaa gtcttggatc gcattgagtc tcataacgat cttccaagct
    17641 ttgagcagta acattgcttg caccacctgt gcattctgtt acatctttcc cagtcatttc
    17701 aagatgcact ccacctggat aaaccccttc gcttattgca atctcaaaaa aagatctcac
    17761 ttcttgcata attttatcaa actcacgtgt tttaaaattg cctgctttta ccgtatttcc
    17821 atgcatagga tctatgctat atactaaatt taaaccttca cttttaagtt tagagaaaat
    17881 ttttggcaaa ttattgataa ttttatctgc acccatgcgg ataataatat ttaatcttcc
    17941 ttcttcattg tttggattta aaacatttgc taaagctatg atatcatcag cacttgcact
    18001 aggtcctatt ttaaccccta aaggattttt tactccactt aaaaaatgca catgagcttc
    18061 atcaagcgcc cttgttcttt cacctatcca aagcatgtga gctgaacaat cgtaaatttc
    18121 tccacttaaa ctatccactc tagttaaagc ttcttcataa ggcaaaagta aagcttcatg
    18181 tgaagtataa acactaactt ctcttagact tggagtatta cttgtattaa ttccacaagc
    18241 ttccataaaa gctaaagctt gtgaaatttt ttcactgata tcagtatatt gcttatggag
    18301 ttcactcttt tttaaaaagc ccaaattcca acgatgtact tcatgtaaat ctgctaaacc
    18361 acccttagca aatccacgca acaaatttag cgttattgcg ctttgataat aagcttcaag
    18421 cattctatgt ggatcaggaa tgcgtgcttg ttcactaaat tcaaaaccat taataatatc
    18481 accacgataa ctaggaagac ttataccatc taactcttca aaatcactac ttcttggctt
    18541 ggcaaactgc cctgcaatac gaccaatttt tataacagga catccaccag caaatgtaag
    18601 tactatagcc atttgaagta aaattttaaa catatcacgg atatttacag cgccaaaatt
    18661 ttcaaaactt tcagcgcaat ctccaccttg aagtaaaaaa gcttcttttt tacaaactct
    18721 tgctaaagac ttttgaagat ttctcacttc tccagcaaaa accaaaggag gaagtttctc
    18781 aagtcttgct aaaactctat tcatttcctc ttgatctgga tagataggtt gctgttttat
    18841 aggatagttt ttccaagaat tcttagccca catggttttt tctttcgttt tatttatcag
    18901 cttcctctat aagttgaata accaaaagga gaaagggtta ttggaacatg ataatgtttc
    18961 tgatctttag aaagctcaaa acttacctct acaaaaggat aaaaagtatt tattttgtgt
    19021 gatgtgtaat agtcttttgt aaaaaattta agcttataaa ttccaaaagc cctattttca
    19081 gctttttcat atggtaataa atctcctatt ctaccatttt cttcggtaaa ttcttcactt
    19141 acttttttcc actgttgatt tgcttccaac ttataaagct caacttttac tttaggagca
    19201 ggttgtccag aagtaatatc caagacatga gtacttaatt gatattcagt agcactcaaa
    19261 aacattggca cgcttgctag tattaataaa gtttttttaa tagaaaacat tttctctcct
    19321 tgtataatat tt
//
LOCUS       DAPIVO010000035        18888 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.035, whole genome shotgun sequence.
ACCESSION   DAPIVO010000035 DAPIVO010000000
VERSION     DAPIVO010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18888)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18888)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18888
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.035"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            124..759
                     /locus_tag="RJ239_001073"
     CDS             124..759
                     /locus_tag="RJ239_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HDV7331200.1"
                     /translation="MKIAILCASGKVGKEISKEALKRNLEPVCFVRNSSKMNEFLPQA
                     KIVQRDLFELDSKDLIDFDIIIDAFGEWENLSLHKKHIECLSVILQGSKAKLFVVGGA
                     GSLYMDENHTTRLMDMPDFPKEYLDIAKASAEVLEFLRNEKGFKWVYVSPSAIFSPDL
                     PKSNHYKIIGEKFEVNANNESKISYSDYASAMIDIVLNSCYENTRIGVISL"
     gene            complement(771..1074)
                     /locus_tag="RJ239_001074"
                     /pseudo
     CDS             complement(771..1074)
                     /locus_tag="RJ239_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809523.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
     gene            1129..2631
                     /locus_tag="RJ239_001075"
     CDS             1129..2631
                     /locus_tag="RJ239_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HDV7331201.1"
                     /translation="MAKKKEIKLEDALWKSADKLRKNIDAAEYKHIVLGLIFLRYISD
                     SFMQKYEELLKEQDDGADPEDADEYLADNIFFVPEKSRYNYIRDNAKNPKIGKMLDEA
                     MDEIEKHNDTLKGVLPKVYAKDNLDSKCLGELIDLIGNIAFDTGKSTDVLGHVFEYFL
                     GEFALAEGKQGGQFYTPKCVVELLVTMLEPYKGRVFDPCCGSGGMFVQSEEFVKSHQG
                     RLDDISIYGQESNQTTYKLAKMNLAIRKIESSQVIWNNEGSFLNDAHKDLKADFIIAN
                     PPFNDSDWSGELLENDGRWKYGVPPASNANYAWIQHFLYHLSPNGGVAGFVLAKGALT
                     SNTTNEAAIRKALIEDDLIDCIVNLPAKLFLNTGIPASLWFIRRQKLPKTVKKTLFID
                     ARDLGTRINRRNKTLNKDDINQIANIYKAWKNGTDYEDIKGFCKSVSIDEIRELSYVL
                     TPGRYVGLADSDDEFDFDTRFNELLAKLKSQIKTEQELSEIILKNLEKIK"
     gene            2628..4094
                     /locus_tag="RJ239_001076"
     CDS             2628..4094
                     /locus_tag="RJ239_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA binding domain-containing protein"
                     /protein_id="HDV7331202.1"
                     /translation="MIRTVMDFKFVLRLLEANQFENEVVEYKKNNKDFIVLGKNISAL
                     SNTAALLGIDKAYIIFGIEDGTLNIVGTNFKPKQEKKGNEELESWLHKVLKPNIEFKI
                     HEITEKEIRLVVFEIEATKISPIKFEEKAYIRIGSNRKELDKYPEKEKKLWQVLSGFS
                     FENEIAKSNLNIQDIYDLLDYSKCFDMLDISYDNYSSDEYIIEKLIEHGLVKNLNDSF
                     AITNLGAILFAKDLTKFKGLNRKRIRFIRYQGKNKIHTLEELEGRKGYAIGFQGLISY
                     IMQYVPKNEVIENAIRKDTTLYPEIAIRELVANAIIHQDFTINGRNPMIEMYSDRIEI
                     TNNGKSLIDIKRLIDMPSKSRNDKLANLMRIMGICEERGSGVDKVIDSVEAYQLPAPD
                     FINNEDYFQAILFSHMPLEDMTKQDRIRATYQHCCLKWASREAMTNASLRARFKIGDK
                     QHSKASKIISDTLEAGLIKQQDPENKSTKHVKYVPFFV"
     gene            4313..5455
                     /locus_tag="RJ239_001077"
     CDS             4313..5455
                     /locus_tag="RJ239_001077"
                     /inference="COORDINATES: protein motif:HMM:NF013579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDV7331203.1"
                     /translation="MNNWKKCKLGDIAEITMGQSPKSEFYNFDNIGMPFLQGNRTFGR
                     KYPYFDTYCTEYKKIAKKGEILFSVRAPVGDINFANNDICIGRGLCSMNAKNGENEFL
                     YYLLHNLRSVIINNESGSVFGSVNKNDLQTIEILLPLLEEQRQIATILSSIDDKIELL
                     HEQNKTLEELAQTLFLNWFKDREFNSTISDFISMQNGFAFKSKDFIDYGNNGVIKIKN
                     ISNGIVDIVNTDKISQNTINEVNNKFNINSGDILFAMTGAEIGKMGIVPSTNKKLWLN
                     QRVGMVKERFLGARFLAYIHLTSEFGYDYVINSATGSAQENISATDIENCPFVKLTSE
                     EIVSYSKQLNDFFEKIIFNLGEIQTLENMRDILIPKLLNGEIKITN"
     gene            5466..7232
                     /locus_tag="RJ239_001078"
     CDS             5466..7232
                     /locus_tag="RJ239_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7331204.1"
                     /translation="MNKYKFVKFQVKNFRSLLDITLNIDNNNINTICGENNIGKTNFL
                     RALNLFFNHNNGVEYNQNEDRPYHIQKGSTGGRKTELIGYFTKNNVTHILKVEFHKDK
                     IVYILNGKMVEWKVARDIVESFKLLFIEASNVNMPSVISAILENDALLALDNKRKKQS
                     EPLRTLKLFIEQSKKAIEDIEKDINIYLKQMLDFDNTLKDKEIKIRFAEFEKLRDVVK
                     TMTSVTLDDGNDHLMDHKGSGAQRIVLLSLMQYITDKITTDIIWAIDEPEAFLQPKLQ
                     KKIMEIFKNIVREKKQPIIMTTHSQYFVDFNNLVNTHLFKLTKEEKIYARKKGRVFQE
                     INTKPIYIGTAFEKLSVIKKHLGIETNDNWDIMPYNILVEGEEDKKYLQMLIEILNLS
                     MPNIIHSGGATKIAGFLEYFNNQCSYTSFKPYFICIFDNDEEGRKQYNKISKDNLYPN
                     IKLDAKKLKRYGESIQENNRDIWEIEDFMPIKIIVDAVNIILKYKQYNTITNSQISDR
                     KKLAFKNMSILDYLEKCIADRNEEKERFILNTESRKKEICQNAFRAREKYTKNDLEDY
                     HVDFMNELIDSFNKVDLIKKDN"
     gene            7235..10330
                     /locus_tag="RJ239_001079"
     CDS             7235..10330
                     /locus_tag="RJ239_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HDV7331205.1"
                     /translation="MSKAKTSEFDLEQFVISSLLEHGWCYEKPVRATDEVLLETSLVN
                     ALCRLNPQLDLSKANEIYKELKSKNHLSLLDSNENFHYKLVNGVNINTTKDGESRADI
                     INLIDFNNASNNEFIATNQLSITEAKENKIPDVVLYINGIPLVLMELKSPSDENATIN
                     SAYNQINTYKQTIPSIFTYNAFCVISDGYFARAGSISADFSRFMAWKSSDGINYAPNK
                     SLEIKTLIDGMLNPKTLLDIICNFIVFEKEQIRDLNGILSIKTTKKIACYHQYYAVNK
                     AISRTITASSKDGDKKGGVVWHTQGSGKSLSMVFYSAKAIKALNNPTILLITDRNDLD
                     DQLFGTFASCANLLRQEPKQANDKEHLKELLRVASGGVVFTTIQKFSPENDNVFECLS
                     LRDNIIVIADEAHRTQYGFDAKVVEEKSKSGDVLGQKIVYGFAKYLRDALPNATYIGF
                     TGTPIESHDINTPAVFGNYIDIYDISRAVEDGATVSIYYESRLAKIELSEEGKRLVNE
                     LDEKLENQDSQKAKATKLEALVGSTSRLKQIAKDIVKHFETRSSKLGGKGMIVSISRS
                     VAIKLYDEIIKIRPSWHSDELSSGAIKVVMTSSSSDGVEFSKHHTSKIQKQFLANRMR
                     NIDDELKLVIVVDMWLTGFDVPSLHTLYIDKPMKGHNLMQAIARVNRVYKDKPSGLVV
                     DYLGIASDLKKALSFYSESGGKGDIITTQEDAVKVMIEKLEIVEQMLPNDYEKYFELD
                     TGAKLEYILDVEEHILSNEDGKNRFIKEFAALDKAYTIAMPHEKALSIKNKIAFMYAI
                     KARFLKFAKENENENLLNQALIKQVVDKAIVSSKVVDIFDASGIKKPDISILSDEFLL
                     EVKNMKRKNLAFEMLKKILNDEIKAREKLSLTKAKKLAQMLSDAIKKYNNKLISSSEA
                     LDELINMSKSIVSMEDEAKKLGLKDYEYAFYSALACNDEYEKILGNEKLLALVSEILQ
                     IIKNNVSIDWMIKENVRARLRVAVKRVLNKYGYPPDMQQLAIDGVLAQAEILAKELAN
                     E"
     gene            10558..11634
                     /locus_tag="RJ239_001080"
     CDS             10558..11634
                     /locus_tag="RJ239_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HDV7331206.1"
                     /translation="MQYKILENNRIASKGYAMLSKDAKFTPFEFSRHAIGDNDILIKI
                     LYAGICHSDIHTARSEWGEATYPCVPGHEIAGEVIAVGKNVSKFKVGDYAGVGCMVNS
                     CGECDACKRSQEQFCENGKTIFTYNSCDVFHGNENTYGGYSNNIVVSEKFAVCVPKDA
                     PMEKVAPLLCAGITTYSPLKFSNIKEGSSVAVAGFGGLGMMAVKYAVKMGAKVSVFAR
                     NENKKADALAMGVSSFYTSCDKNAVKERFDLIISTIPTPYNPAIYLDLLKFGGEMAIV
                     GLPPHEVAPSISVITFVHKAGKKVYGSLIGGIAETQEMLDFSLKHGIYPETELITPQE
                     IDKAYENLTSGKAKFRYVIDMTKE"
     gene            complement(11636..12085)
                     /locus_tag="RJ239_001081"
     CDS             complement(11636..12085)
                     /locus_tag="RJ239_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HDV7331207.1"
                     /translation="MLELIGELSLQNYMGEWLEIARKPAFFQKSCLNSKAKYELKYKN
                     GIPYVEIENFCSKKNEISSIKGKAKIVSNRQLAVRFNIFMNLFNKVNYEIIFVDSEYK
                     VAIVGSPDKKYLWILARNIIDEKNIKELLNIAKQRGFDISDVVFDKY"
     gene            complement(12073..12420)
                     /locus_tag="RJ239_001082"
     CDS             complement(12073..12420)
                     /locus_tag="RJ239_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV7331208.1"
                     /translation="MTKENSPCNFEECGFNYTLALINGKYKMSILYCLFRYEIVRYNE
                     LKRFLSSISFKTLTNTLRELENDGLIIRKEYAQIPPKVEYSLSKRGQSLIPILQAMSK
                     WGKKDKKGKKCLN"
     gene            12520..13098
                     /locus_tag="RJ239_001083"
     CDS             12520..13098
                     /locus_tag="RJ239_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDV7331209.1"
                     /translation="MKNILLLNGAKEFGNSKGQLNLTLHNHALEILKTLGYEVDQTHI
                     DQGYDPKEEIQKFIKADAVIYQMPAWWMGEPWIVKKYIDEVFGLGAGVLFKNDGRTHE
                     NPSKNYGKGGLDHGKKYMFSLTWNAPLEAFNDKNEFFEGKGVDMVYWHLHKAHEFIGM
                     KALPTFMCNDVVKNPQVEKYLNEYELHLKKIF"
     gene            13131..14027
                     /locus_tag="RJ239_001084"
     CDS             13131..14027
                     /locus_tag="RJ239_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDV7331210.1"
                     /translation="MTRTKYLYILLVIAMFLWGSSWPTSKILANYTDTSIITFWRFFF
                     VVLGSFFVLNFLKIPLKIEKTALKWVLIAGVLNGLYAFVFFIAIKHGLAGKGGVLVTT
                     MIPIFSYLIFMIAIFFQKNKKSTHKITKSEILGLFLGLLSGFCLLNLGSLEDLFGKFN
                     ILFLTCSFIWALMAVFNHKAKGAHPLAINFYINLISILMFSWILFDVKSYEIFHFEFK
                     FWISMFVVAFLSTIIGTSIYYYGIHILGSVKANSFVLITPASALICSYFILDEVPNAL
                     TLLGCALAIGAIYFINIYGKKA"
     gene            complement(14024..14989)
                     /locus_tag="RJ239_001085"
     CDS             complement(14024..14989)
                     /locus_tag="RJ239_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HDV7331211.1"
                     /translation="MSIKIIEASINSSLQDFGRKKFAKFGIARSGAMDEDALRMANIL
                     LGNKQDEAGIELCLKGGKYEFLDENYFVLSGAEFEAKLDNQKIKTCKVYQANKGDILE
                     LDLAKIGFRGYLCVAGGFEVKSFLNSKSSDAKMGAGVFEGRALQKDDILNTHNTFIPF
                     NLEARECENPLFKSPKEPIIRVILGTNEDAFTQKGIETFLNTTYKVGLKSDRMAIYAE
                     SSESIEHKNSADIISDPAVFGSIQVPKSGIPIILMAGRQSTGGYTKIATVIENDLSLL
                     AQAKLGSSFKFQSISMQEALELYKQREMKFKAMDQKINLDFENLI"
     gene            complement(14970..15710)
                     /gene="pxpB"
                     /locus_tag="RJ239_001086"
     CDS             complement(14970..15710)
                     /gene="pxpB"
                     /locus_tag="RJ239_001086"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HDV7331212.1"
                     /translation="MFSVHFSGSKALLLRFEQEISPQINAYVLSTEQRIQKALKEGEI
                     YGIDELVSAYASLLIYFNPCVLSLNSLLDFLEKIKKDIKLAEQNSSLCIEVPLCYDEE
                     FGLDLEFVCKHNQISKEELISLHTKPYYLVFMLGFMAGFPYLGGLDERLFTPRLSSPR
                     AKIEAGSVGIADKQTGVYPISSPGGWQIIARTPLEFFDKEDEKNPTLLKAGMFLKFKA
                     ISKDEFFDIQEQVAKKVYQKEIYEYKNH"
     gene            complement(15720..16487)
                     /locus_tag="RJ239_001087"
     CDS             complement(15720..16487)
                     /locus_tag="RJ239_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamB/YcsF family protein"
                     /protein_id="HDV7331213.1"
                     /translation="MFKVDLNSDLGESFGAYKMGMDEEILKFVSSVNVACGFHAGDPC
                     VMDETLNLAKQNGVCIGAHPSYPDLLGFGRRNMQISFEEAKNYALYQLGALFGFAKAK
                     GMKIQHFKAHGALYNMAAIDENLALALCEAVASFDENIIFLGLSNSAMNEAAKKKGLR
                     YANEVFADRAYNDDGTLVSRKLEGALIHDENLAIKRVIKMIKESKVTSINGKEIDLKA
                     DSICVHGDNAKALEFVKKIKENLKKEQIQICALENFI"
     gene            complement(16629..17438)
                     /locus_tag="RJ239_001088"
     CDS             complement(16629..17438)
                     /locus_tag="RJ239_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDV7331214.1"
                     /translation="MKKIISLALALALSASAAELKMATTTSTDNTGLLDALKPLYEKE
                     SGNTLKWVAVGTGAALKMGEDCNADVLFVHSPKAEKEFMKKGFGVDRTPVMYNDFIII
                     ADKSLASKFKGKNLKESLELIKNEKLTFISRGDKSGTDNKEKSLWKNLGGVPEKQSWY
                     QQSGQGMLASIKIAEEKKGVILTDRGTYIKYEANEKGKPNLVIVNEGDDSLKNFYSVI
                     ATNPKHCKNVNYTEASKFIKWVTSDKTLNFIADFKLLNKPLFVIDAKTRKD"
     gene            17517..18203
                     /locus_tag="RJ239_001089"
     CDS             17517..18203
                     /locus_tag="RJ239_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002874119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7331215.1"
                     /translation="MDYIFDGFKQALFLLFNADESVISAIKTTLLSSSISIVLALLIG
                     FPLGFILGFFEFKLKRFIKLIVDTSLSFPTVAVGLILYALISSRGPLGEFGLLFTIKA
                     LILGQFILALPIVIALFSNLIENMNKKHFLLIKSFHLSPLKLVLTMIYELRFALISVV
                     ALAYGRIVAEVGVAMIVGGNIKYDTRTITTAISLETNKGEFASGIALALVLILIAFCL
                     NFITHKLKRT"
     gene            18205..>18888
                     /locus_tag="RJ239_001090"
     CDS             18205..>18888
                     /locus_tag="RJ239_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7331216.1"
                     /translation="MIEISNLFFNYQNKEVLKIKNLKLDTSKISILMGANGSGKSTFL
                     RILKFLEGDFSKNISYFGNFKPNNKQKREIYLLFPEPILLNRSVRANFLFTLKTYGIK
                     EDIEERIKESLMFLNLDESFLSKHPNELSSGQSQKIAFAIALSVRAKYYLLDEPSAFL
                     DKNTTLLFKKTILKMHENFNTGFLIASHDKHFLDSLAQKKLYLHSGEILEFENTNVFE
                     LENQGVKFCN"
BASE COUNT         6788 a         2644 c         3211 g         6245 t
ORIGIN      
        1 aacataatac tcctaaaata gatactatat tataaaataa tatctacttg atttttagta
       61 gtaaatatat ttataatttc tagattgcat tttttatgta aaaatactta aaaaggagat
      121 attatgaaaa tagcaatttt atgtgcaagc ggtaaagtag gcaaagaaat cagcaaagaa
      181 gctttaaaaa gaaatttaga gccagtatgt tttgtacgca atagctctaa aatgaatgaa
      241 tttttacctc aagctaaaat agtacaaaga gatctttttg aacttgattc taaagatctg
      301 atagattttg atattattat tgacgctttt ggagaatggg aaaatttaag cttacataaa
      361 aagcatatag aatgcttgag tgtaatttta caaggaagta aggctaaatt atttgttgta
      421 gggggtgctg gaagtttgta tatggatgag aatcatacta caagacttat ggatatgcct
      481 gattttccta aagagtattt ggatatagct aaagcaagtg cggaagtatt ggaattttta
      541 cgcaatgaaa aaggttttaa atgggtatat gtgagcccat ctgctatttt ttcaccagat
      601 cttccaaaaa gcaatcatta taaaatcata ggcgaaaaat ttgaagtgaa tgccaacaat
      661 gaaagtaaaa tcagctatag tgattatgct agtgctatga tagacatagt gcttaattct
      721 tgctatgaaa acacacgcat tggggtaata agcctataaa taaagatgcc ttatgctttt
      781 aaggcatctt ttatttcttt taaatactta ttttgaagtt ttaaattttc ttctaaagaa
      841 tttaaaatct cttcgctagt tcttaggatt ttttcttctt ttacatttgg atttttagca
      901 cttaaatcat aatttctttc ttcaagttct tttttgctaa gcagccaaga attagcagtg
      961 atttttcttt tctttgtagc attttagaaa ttccttaaaa tgtgcgtatt ctaaaggctt
     1021 gtttttagta agcttgtaag gtggtataag ctcgtagtaa tacaccttat catcatttgc
     1081 ttttaaaata ctatttgtta tacttaataa aattatttaa ggataaaaat ggcaaagaaa
     1141 aaagaaataa aactagaaga tgcgttatgg aaaagtgctg ataaattacg caaaaatatc
     1201 gacgcagcag agtataaaca catagtttta ggacttatat ttttacgcta cattagcgat
     1261 agctttatgc aaaaatacga agagttatta aaagaacaag atgatggagc cgacccagaa
     1321 gatgcagatg aatacctagc tgacaatatc ttcttcgttc cagaaaaatc tcgctacaac
     1381 tacataagag ataacgccaa aaatcccaaa ataggcaaaa tgctagatga agcaatggac
     1441 gagatagaaa aacacaacga tactctaaaa ggagttttgc caaaagtcta tgccaaagat
     1501 aacttagata gtaaatgcct aggcgaactt atagatctta taggaaatat cgcctttgac
     1561 actggtaaaa gcaccgatgt tttaggtcat gtatttgagt attttttagg tgaatttgcc
     1621 ctagctgaag gcaaacaagg cggacaattc tacactccaa aatgcgtcgt agagctccta
     1681 gtaactatgc ttgagccata taaaggcaga gtgtttgatc cttgctgtgg aagtggcggt
     1741 atgtttgttc aaagcgaaga gtttgtaaaa tctcaccaag gcagactaga tgacatctca
     1801 atctatggtc aagagtcaaa tcagactacc tacaaactcg ccaaaatgaa cctagccata
     1861 agaaaaatcg aaagctcaca agtgatatgg aacaacgaag gctcattttt aaacgacgct
     1921 cataaagact taaaagccga ttttattata gccaatccac catttaacga ctcggactgg
     1981 agcggcgaac tgttagaaaa cgatggcaga tggaaatacg gcgtcccacc agcaagcaac
     2041 gccaactacg cttggataca gcacttttta tatcatctat caccaaacgg cggtgtagcg
     2101 ggatttgtcc tagctaaagg cgcacttaca agcaacacca caaatgaagc agccattaga
     2161 aaagcactta ttgaagatga tttgatagat tgtatagtaa atctacccgc aaagctgttt
     2221 ttaaatacag gtattcctgc atcactttgg tttataagac gccaaaagct accaaagaca
     2281 gtcaaaaaaa cgctttttat agatgcaaga gatttaggaa ctaggataaa tagacgcaac
     2341 aaaaccctaa acaaagacga tataaaccaa atcgcaaata tttataaagc atggaaaaac
     2401 ggcactgatt atgaagacat aaaaggcttt tgtaaaagtg ttagcataga tgagataaga
     2461 gagctttctt atgtgcttac cccagggcgt tatgtggggc ttgctgatag tgatgatgag
     2521 tttgattttg atactagatt taacgagctt ttagcaaagt taaaatccca aatcaaaact
     2581 gagcaagagc taagtgaaat tatcttaaaa aacttagaga agattaaatg ataaggacgg
     2641 ttatggattt taaatttgta ctaagattgt tagaagcaaa ccaatttgag aatgaagtgg
     2701 ttgaatataa gaaaaataat aaagatttta ttgtattagg aaaaaatatt tctgctttgt
     2761 caaatacagc tgctttactg ggtatagata aagcatatat aatttttggc attgaagatg
     2821 gtacgcttaa tattgtcggt acaaatttta aaccaaaaca agaaaaaaag ggaaatgaag
     2881 agcttgaaag ttggttgcat aaagttttaa aacctaatat agaatttaaa attcatgaaa
     2941 taacggaaaa agaaatcagg ttggtggtat ttgaaattga ggcaactaag atttcaccaa
     3001 taaaatttga agaaaaagct tatataagga taggcagtaa tagaaaagaa ttggataaat
     3061 atccagaaaa agagaaaaaa ttatggcaag ttctttcagg cttttctttt gaaaatgaaa
     3121 tagctaaatc aaatttaaat attcaagata tatatgattt attggattac agtaagtgtt
     3181 ttgatatgtt agatatatct tacgataatt attcttcaga tgaatatatt attgaaaaat
     3241 taattgagca tggtttagtt aaaaatttga atgattcttt tgctattact aatttaggtg
     3301 ctatcttgtt tgcaaaagat ttaacaaaat ttaaaggctt aaatagaaaa agaattagat
     3361 ttataaggta tcaaggtaaa aacaaaattc atacattaga agaattagaa ggtagaaaag
     3421 gatatgctat tggttttcaa ggattgattt catatataat gcagtatgtt cctaaaaatg
     3481 aagtgataga gaatgcgata agaaaagata ctactttata tccagaaatc gcaataaggg
     3541 aacttgtagc taatgcgata attcatcaag attttacaat aaatggtaga aatccaatga
     3601 ttgaaatgta tagcgataga atagaaataa caaacaatgg aaaatctctt atagatatta
     3661 aacgattaat agacatgcca tcaaagtcac ggaatgataa gttggctaat ttaatgagaa
     3721 taatgggtat atgtgaagaa aggggttctg gtgtggataa ggttatagat agcgttgaag
     3781 cttatcaatt gccagcacca gattttataa ataatgaaga ttattttcag gcaattttat
     3841 tttctcatat gcccttagaa gatatgacca aacaagatag aataagagct acatatcaac
     3901 attgttgttt aaaatgggct tcaagagaag ccatgacaaa tgctagctta agagctagat
     3961 ttaaaatagg tgataagcaa cattcaaaag cttcaaaaat aattagcgat actttagagg
     4021 caggtttgat taagcagcaa gatccagaaa ataaatctac aaaacatgtt aaatatgttc
     4081 cattttttgt ttaggtttta tgtcatgctt tcgtcaaaat tatttaaaaa tagcttaaat
     4141 tatatatcac atagctttaa aatacgagct tttagcgttt tttcttctgt catgctttcg
     4201 tcattatctt ttaaaccaag cttaaacaaa ggaaattccg aatttaaatt ctcgaattta
     4261 tttcgtgtat tttttggatt ttttacgcaa ataaattcca agggattaag atatgaataa
     4321 ttggaaaaaa tgtaagcttg gggatattgc agagataaca atggggcaat ctccaaaatc
     4381 agaattttat aattttgata atataggtat gccattttta caaggcaata ggacttttgg
     4441 taggaaatat ccttattttg atacatattg cactgaatat aaaaaaatag ctaaaaaggg
     4501 tgagatttta tttagtgtga gagctcctgt cggagatatt aatttcgcaa acaatgatat
     4561 ttgtatcggt aggggcttat gctccatgaa tgcaaaaaat ggtgaaaatg aatttttata
     4621 ttacttatta cacaacttaa gaagtgttat tataaataat gagtctggta gtgtttttgg
     4681 ctcggtaaat aaaaatgatt tacaaacaat agaaatttta ttaccgctat tagaagagca
     4741 aaggcaaatt gctactatct taagtagtat tgatgacaag atagaactac tacacgagca
     4801 aaacaaaacc ctagaagaac tcgcccaaac tcttttttta aattggttta aagatagaga
     4861 atttaatagc actattagtg attttatatc tatgcaaaat ggttttgctt ttaagagtaa
     4921 agattttata gattatggta acaatggagt aataaagata aaaaatattt caaatggaat
     4981 tgtagatatt gtaaatactg ataagataag ccaaaatact ataaatgaag ttaataacaa
     5041 atttaatata aattctggag atattttatt tgcaatgact ggtgctgaga taggtaaaat
     5101 gggtatcgtt ccaagtacaa ataaaaaatt atggttaaat cagcgagtag gaatggtaaa
     5161 agaaaggttt ttaggagcta ggtttttagc atatatacat ttaacttctg aatttggtta
     5221 tgactatgtt atcaattcag ctactggcag tgctcaagaa aatataagtg cgacagatat
     5281 tgaaaattgt ccatttgtta agcttacgag tgaagagatt gtgagttatt ctaaacaatt
     5341 aaatgatttt tttgaaaaaa ttatatttaa tctaggagaa attcaaaccc tagaaaatat
     5401 gcgtgatata cttatcccaa aactcctaaa tggagaaata aaaataacta actaaaggag
     5461 aatgtgtgaa taaatataag tttgtaaaat ttcaggttaa aaactttcgt tctttattgg
     5521 atattacttt aaatatagac aataataata taaatacaat ttgcggtgaa aataatattg
     5581 gaaagactaa ttttttgaga gccttaaatt tattttttaa tcataataat ggtgtggagt
     5641 ataatcaaaa tgaagataga ccatatcata ttcaaaaggg atcaactggt ggtagaaaaa
     5701 cagaattaat aggctatttt acaaaaaata atgtcacaca tattttaaaa gttgaatttc
     5761 ataaagataa gattgtgtat atattaaatg gaaagatggt tgaatggaaa gttgctagag
     5821 atattgtaga aagttttaaa cttttattta tagaagcaag taatgtgaat atgcctagcg
     5881 taatttctgc tattttagaa aacgatgctt tgttagcctt agataataaa cgaaaaaagc
     5941 aaagtgagcc tttaagaaca ttgaaattat tcatagaaca atcaaagaaa gctatagaag
     6001 atatagaaaa ggatattaat atatatttaa aacaaatgtt agattttgat aacaccttaa
     6061 aagacaagga aataaaaatt agatttgccg aatttgaaaa attaagagat gttgtaaaaa
     6121 ctatgacatc tgttacttta gacgatggaa atgaccactt aatggatcat aaagggagtg
     6181 gtgctcaaag aatagtactt ttatctttaa tgcaatatat tacagataaa attacaacag
     6241 atataatatg ggcaattgat gaaccagaag catttttgca gccaaaatta caaaaaaaga
     6301 ttatggaaat atttaaaaat attgtaagag agaaaaagca gcctataatt atgacaacac
     6361 attctcaata ctttgtagat tttaataatt tagtcaatac tcatttgttt aaattgacaa
     6421 aagaagaaaa gatttatgct agaaaaaaag gtagagtatt tcaagaaatt aacacaaaac
     6481 cgatttatat aggcactgcg tttgaaaagt tatctgttat taaaaaacat ttaggtatag
     6541 aaaccaatga taattgggat attatgcctt ataatatttt agttgaagga gaagaagata
     6601 agaaatattt gcaaatgcta atagaaattt taaatttatc tatgccaaat ataatacatt
     6661 ctggtggtgc aactaaaata gcaggttttt tagaatattt taataatcag tgcagttata
     6721 cttcttttaa accatatttt atatgtattt ttgataacga tgaagaaggt agaaaacaat
     6781 acaataaaat atcaaaagat aatttatatc caaacataaa gctagatgca aaaaaattaa
     6841 aaagatatgg agaatcgata caagaaaata atagagatat ttgggagatt gaagatttca
     6901 tgcctataaa aataatagta gatgcagtta atattatact taagtataaa caatacaata
     6961 cgataacaaa ctctcagata agtgatagaa aaaaactagc atttaaaaat atgtcaattt
     7021 tggattattt agaaaaatgt attgctgata gaaatgaaga gaaagaaaga tttatattaa
     7081 acactgaatc aagaaaaaaa gaaatttgcc aaaacgcatt tagggctcgt gaaaaatata
     7141 caaaaaatga tttagaagat tatcatgttg attttatgaa tgaacttatt gatagcttta
     7201 acaaagtaga tttgataaaa aaggataact aaaaatgagc aaggcgaaga ctagtgagtt
     7261 tgatttagag cagtttgtta tatcatcact acttgagcat gggtggtgct atgaaaagcc
     7321 tgtaagagcc actgatgaag ttttgctaga aactagcctt gtaaatgcac tttgtaggct
     7381 aaatccacag cttgatttat caaaagctaa tgaaatttat aaggagctaa aaagcaaaaa
     7441 tcatcttagc cttttagata gcaatgaaaa ctttcattat aagcttgtaa atggggtaaa
     7501 tataaacact acaaaagacg gcgaaagcag agctgatatc ataaatctaa ttgattttaa
     7561 taatgcaagc aacaatgaat ttatagcaac aaaccagcta agcatcacag aagctaaaga
     7621 aaacaaaatc cccgatgtag tgctatatat aaatggaatt ccgcttgttt taatggagct
     7681 aaaaagccca agcgatgaaa acgccacgat aaactcagct tataatcaaa taaacactta
     7741 taaacaaaca atcccaagta tttttacata taatgctttt tgtgtgataa gcgatgggta
     7801 ttttgctagg gcggggagta tttcggctga tttttcaagg tttatggcgt ggaaaagtag
     7861 cgatgggata aactacgctc caaacaagtc tttagaaatt aaaaccttaa tagatggtat
     7921 gctaaatcca aaaaccttgc tagatatcat ttgcaatttc atagtttttg aaaaagagca
     7981 aataagagat ttaaatggta ttttaagtat aaaaactacc aaaaaaatcg cttgctatca
     8041 tcaatactac gcagtaaata aagccattag tagaacaatc acagcaagta gcaaagacgg
     8101 agataaaaaa ggtggcgtgg tgtggcatac gcaaggtagt gggaagtctt tgtctatggt
     8161 gttttatagt gctaaagcga taaaggcttt aaataatcct acgattttgc ttatcacgga
     8221 tagaaatgat ctagatgatc agctttttgg tacttttgca agttgtgcga accttttaag
     8281 acaagagcca aaacaagcaa acgataaaga gcatttaaaa gagcttttaa gggtagctag
     8341 tggtggagtg gtatttacta ctattcaaaa atttagtcca gaaaatgata atgtatttga
     8401 gtgcttatcg cttagagata atatcatcgt aattgcagat gaagcacaca gaacccaata
     8461 cggctttgat gcaaaagtag tagaagaaaa gtcaaaaagt ggcgatgtgc tagggcaaaa
     8521 gatagtttat ggtttcgcaa aatatctgcg tgatgctttg ccaaatgcta cttatatagg
     8581 atttacagga acgccaattg aaagccatga tataaacacc cctgcagttt ttggaaacta
     8641 catagatata tatgatatat caagagctgt tgaagatggt gctactgtga gtatatatta
     8701 tgaaagcaga cttgccaaaa tagagctaag cgaagaagga aaaaggcttg taaatgaatt
     8761 agatgaaaag cttgaaaacc aagatagcca aaaagcaaaa gctactaagc tagaagcttt
     8821 agtaggtagc acaagcagac taaaacaaat cgctaaagat atagtaaaac actttgaaac
     8881 aaggtctagt aagctcggcg gaaaaggtat gatagtaagt ataagccgaa gcgtagctat
     8941 aaaactatat gatgaaatca taaaaataag accaagttgg catagcgatg agctaagtag
     9001 cggggctata aaagtagtga tgacttcaag ctctagcgat ggggtagagt ttagtaaaca
     9061 tcatacaagt aagattcaaa agcagttttt ggcaaatcgt atgagaaata tagacgatga
     9121 attaaaacta gttatagtgg tggatatgtg gctaactggc tttgatgtgc catcgcttca
     9181 tactctttat atagataagc ctatgaaagg gcataatcta atgcaagcta tagctagagt
     9241 aaatagggtt tataaggata aacctagtgg gcttgtggtg gattatcttg ggattgcaag
     9301 tgatttgaaa aaagctttat cattttatag tgaaagtggt ggcaagggcg atataatcac
     9361 tactcaagaa gacgctgtaa aagtgatgat agaaaagctt gaaatcgtag aacaaatgct
     9421 gccaaatgac tatgaaaaat actttgaact tgatacgggg gctaaacttg aatatatact
     9481 tgatgtagaa gagcatatat tatcaaatga agatggtaag aacagattta taaaagaatt
     9541 tgcagcactt gataaagcct acacgatagc tatgccacac gaaaaagctt tgagcataaa
     9601 gaataaaatc gcttttatgt atgcgataaa ggctaggttt ttaaagtttg ctaaagaaaa
     9661 tgagaatgaa aatttgctta atcaagcttt gataaagcaa gtagtagata aagctattgt
     9721 atcatctaaa gtggtggata tttttgatgc tagtggtata aaaaagcctg atatatctat
     9781 actttctgat gagtttttac tagaagtaaa gaatatgaag cgtaaaaatt tagcctttga
     9841 aatgctaaaa aagatactaa atgatgagat aaaagcaaga gaaaagctaa gcctaacaaa
     9901 ggctaaaaaa ttagcacaaa tgcttagtga tgctatcaaa aaatataaca ataagctaat
     9961 ctcatcaagc gaggcactag atgagctaat aaatatgagt aaaagcatag taagtatgga
    10021 agatgaggct aagaagttag gtttaaaaga ctatgaatac gccttttact cagcacttgc
    10081 ttgtaatgat gagtatgaaa agattttagg caatgaaaaa ctattagcac tcgttagtga
    10141 aatactgcaa attatcaaaa acaatgtaag tatagactgg atgataaaag aaaatgtaag
    10201 agcaagatta agagtagctg taaaaagagt gttaaataag tatggttatc cacctgatat
    10261 gcaacaactt gcaattgatg gagttttagc tcaagctgaa attttggcta aggaattagc
    10321 taacgagtag aatttaagcg atactgaaat taaatttgtt tgtattattt tcttttatct
    10381 ttattataga tagcttgatt tgtcgttgca actatgtctt tgttataaaa tttgcttaat
    10441 tttatacaat ttcactagta tccagtattt atactaattt ttaaaaaatt attttcactc
    10501 ttgacttata gctactctaa tgttttataa ttataaaaaa tcaaaaaagg agcaaaaatg
    10561 caatacaaaa ttttagaaaa caatcgcatc gcaagtaaag gctatgcaat gcttagcaag
    10621 gatgcgaaat ttacaccctt tgaatttagc cgccatgcta ttggcgataa tgatattttg
    10681 attaaaatcc tatatgcagg catttgtcat agcgatattc acaccgcaag aagcgagtgg
    10741 ggagaagcta cttatccttg cgtgcctggg catgagatag caggagaagt tatcgctgtg
    10801 ggtaaaaatg tgagtaaatt taaagtagga gattacgcag gggttggttg tatggtaaat
    10861 tcatgcggtg agtgcgatgc ttgcaaacgc tcacaagagc agttttgcga aaatggcaaa
    10921 accatcttta cttacaatag ttgtgatgta tttcatggca atgaaaacac ttatgggggc
    10981 tactcaaaca acatagttgt aagtgaaaaa tttgccgttt gtgtgccaaa agatgcaccg
    11041 atggaaaaag tcgcgccttt gctttgtgca ggaattacca cttattctcc gcttaaattt
    11101 tcaaatatca aagaaggctc aagcgtagca gtagcgggat ttggcggact tggtatgatg
    11161 gcggttaaat atgctgtgaa aatgggtgca aaggttagcg tttttgctag aaatgaaaac
    11221 aaaaaagccg atgctttggc tatgggtgta agctcatttt acacaagctg cgataaaaac
    11281 gctgtaaaag aacgttttga tttaatcatc tcaaccattc caacgcctta taatcctgct
    11341 atttatttgg atttgcttaa atttggcggt gaaatggcga tagtgggttt gccacctcac
    11401 gaagttgctc caagtatcag cgtgataacc tttgtacata aggcaggtaa aaaggtttat
    11461 ggctcgttaa ttggtggtat tgctgaaact caagaaatgc ttgatttttc tttaaaacac
    11521 ggaatttatc cagaaaccga gcttattacc ccacaagaaa tcgataaagc ttatgaaaat
    11581 ctaacctcag gaaaggctaa atttcgctat gtcattgata tgacaaaaga ataatttaat
    11641 acttatcaaa aaccacatcg ctaatgtcaa atcccctttg cttagcgatg tttaaaagct
    11701 cttttatatt tttttcatct attatatttc ttgctaaaat ccaaagatat tttttatcag
    11761 gactacccac aatggcaact ttatactcgc tatcaacaaa aatgatttca taatttactt
    11821 tattaaaaag gttcataaag atgttaaatc tcactgctaa ttgcctattt gaaacgattt
    11881 ttgccttacc ctttatactt gaaatttcat tttttttact gcaaaaattc tcaatttcta
    11941 cataaggaat gccatttttg tatttaagct cgtattttgc ctttgaattt aggcaagatt
    12001 tttgaaaaaa ggccggtttt ctagctattt caagccattc tcccatataa ttttgcaaag
    12061 aaagttcgcc aattaattca agcatttttt cccttttttg tctttcttgc cccatttgct
    12121 catagcttgt aaaatgggaa ttaaactttg tccacgtttg gataagctat attctacctt
    12181 gggtggaatt tgagcgtatt cttttctgat aattaaacca tcgttttcta gttctcttaa
    12241 ggtattggtt aaagttttaa aagatatgga gcttaaaaag cgtttgagtt cattataacg
    12301 cacgatttca tagcgaaata agcagtataa aatactcatt ttatattttc cattaattaa
    12361 tgctagagta tagttaaatc cacattcttc gaaattgcac ggagaattct ctttagtcat
    12421 ttaacattcc tttagtatag tatattactt tattttctgt attgaaaatg atattatgct
    12481 aagttataat tgtatcataa aatttaaaaa aggataaaaa tgaaaaatat actcttgctt
    12541 aatggtgcta aagaatttgg aaattcaaaa ggacaactta atttgacatt gcataatcat
    12601 gctttagaaa ttttaaaaac actaggatac gaggtagatc aaactcacat agatcaagga
    12661 tatgatccta aagaagagat acaaaaattt ataaaagctg atgctgtgat ctatcaaatg
    12721 ccagcttggt ggatggggga gccttggata gttaaaaaat atatcgatga agtgtttggt
    12781 ttgggtgctg gagtgctttt taaaaatgat ggaagaactc atgaaaatcc tagtaaaaac
    12841 tacggaaaag gtggtttaga tcatggtaaa aaatacatgt tttctctcac ttggaatgca
    12901 cctcttgaag cctttaatga taaaaatgaa ttttttgaag gaaagggtgt agatatggtg
    12961 tattggcatt tgcataaggc tcatgaattt ataggtatga aagctttacc aacttttatg
    13021 tgtaatgatg tggtaaaaaa tcctcaagtg gaaaaatatc taaacgagta tgaactacac
    13081 ttgaaaaaaa ttttttaaaa aatttgactt aaaaatttca aggtgtaaca ttgactcgaa
    13141 caaagtattt gtatatcttg cttgttattg ctatgttttt atggggctca tcttggccaa
    13201 catctaagat tttagcaaat tatacggata cttctattat taccttttgg cgttttttct
    13261 ttgttgtatt gggttcattt tttgttttaa acttcttaaa aattcctctt aaaatcgaaa
    13321 aaactgcctt aaaatgggta ttgatagcag gagttttaaa tgggctttat gcctttgtat
    13381 tttttattgc tataaagcac ggcttggcag gcaaaggagg agttttagta accactatga
    13441 ttcctatttt ttcttatttg atatttatga tagcgatatt ttttcaaaaa aacaaaaaat
    13501 caactcacaa gatcacaaag agtgaaattc taggcttatt tttaggttta ttatctggat
    13561 tttgtttgct aaatttaggg agtttagaag atttatttgg taaatttaat attttatttt
    13621 taacttgttc ttttatttgg gctttgatgg cagtgtttaa tcataaagcc aaaggagctc
    13681 accctttggc gattaacttt tatattaatc tcatttctat tttaatgttt tcttggatat
    13741 tgtttgatgt aaaaagttat gaaatttttc attttgaatt taaattttgg atcagtatgt
    13801 ttgtcgtggc ttttttatca actattatag gaactagtat ttattattat gggattcaca
    13861 ttttaggaag cgttaaggca aattcttttg ttttaatcac tcctgctagt gctttaattt
    13921 gtagttattt tatactagat gaggtgccaa atgcacttac cttgttaggt tgtgccttgg
    13981 ctataggtgc tatatatttt atcaatattt atggcaaaaa agcttagatt aaattttcaa
    14041 aatcaagatt gattttttga tccatagctt taaatttcat ttctctttgt ttataaagtt
    14101 ctaaggcttc ttgcatgcta atgctttgaa atttaaagct agaacctaac ttagcttgtg
    14161 cgagtaagct tagatcattt tctataaccg tggctatttt tgtatagcct cctgtgcttt
    14221 gtcttcctgc cattaaaatg ataggaatac cactttttgg cacttgtata cttccaaaaa
    14281 ccgcaggatc tgagatgata tctgctgagt ttttatgctc tatactttca ctagattctg
    14341 cataaattgc cattctatcg ctttttaaac ctactttata agtagtattt aaaaaggttt
    14401 ctatgccttt ttgggtaaaa gcatcttcat ttgttcctaa aataacgcgt ataataggct
    14461 ctttagggct tttaaaaaga ggattttcac attctctagc ttctaaatta aaaggtataa
    14521 aagtattatg agtatttaaa atatcatctt tttgcaaagc tcttccttca aaaactccag
    14581 ctcccatttt agcatcactg gatttagagt ttaaaaaact ttttacttca aagccacccg
    14641 ctacgcataa atacccacga aaacctattt ttgctaaatc aagttctaaa atatcgcctt
    14701 tatttgcttg atatactttg caagttttga ttttttgatt atcaagcttt gcctcaaatt
    14761 cagctccact taaaacaaaa taattctcat ctaaaaattc gtattttcca ccctttaaac
    14821 aaagctcaat tcctgcttca tcttgtttgt ttccaagcaa gatatttgcc attcttaaag
    14881 catcttcatc catagctcca cttcttgcta tgccaaattt agcaaatttt tttctaccaa
    14941 agtcttgcaa acttgaattt atagatgctt caatgatttt tatactcata aatttccttt
    15001 tgatagactt ttttagcaac ttgctcttgg atatcgaaaa attcatcttt tgaaatggct
    15061 ttaaatttta aaaacatacc cgcttttaaa agagtgggat ttttttcatc ttctttatca
    15121 aaaaattcca aaggtgttct agcaatgatt tgccaacccc ctggacttga tatgggataa
    15181 actcctgttt gtttatcggc tatacctaca cttccagctt ctatttttgc tctagggctt
    15241 gaaaggcgtg gggtaaaaag tctttcatct aaacctccaa gataaggaaa acctgccata
    15301 aaacctagca taaaaacaag ataataaggt ttagtgtgaa gagatataag ctcttctttt
    15361 gaaatttgat tgtgtttgca cacaaattct aaatccagcc caaattcttc atcataacaa
    15421 agtggaactt ctatacaaag acttgagttt tgttctgcaa gtttaatatc ctttttaatt
    15481 ttttccaaaa aatcaagcaa ggaatttaaa gaaagcacgc aaggattaaa atatataagc
    15541 aagcttgcat aagcacttac caactcatca atcccataaa tttcaccttc ttttagggct
    15601 ttttgtatcc tttgttctgt gcttaaaaca taggcattga tttgaggtga aatttcttgc
    15661 tcaaaacgca aaagcaaagc tttacttcca ctaaaatgca cactaaacat tgctaaaact
    15721 tatataaaat tttccaaagc acaaatttga atttgctctt tttttaaatt ttctttgatt
    15781 tttttaacaa attctaaagc ttttgcatta tccccatgaa cacaaatact atcggctttt
    15841 aaatcaattt ctttgccatt tatgcttgta actttgcttt cttttatcat ttttatcacg
    15901 cgtttgatag ctaaattttc atcgtgtatt aacgcccctt ctaattttct tgaaactaaa
    15961 gtgccatcat cattataggc acgatctgca aaaacttcat tagcatatct taaacccttt
    16021 ttcttagctg cttcattcat agcagaatta ctaagcccta gaaaaataat attttcatca
    16081 aaactcgcca ctgcctcaca aagtgctaag gctaaatttt catcaatagc tgccatatta
    16141 taaagcgccc catgggcttt aaaatgctgt attttcatac cttttgcctt agcaaagcca
    16201 aataaagctc ctagttgata caaggcatag tttttagcct cttcaaagct tatttgcata
    16261 ttgcgtcttc caaaacccaa aagatcagga taagatggat gtgctcctat gcaaacacca
    16321 ttttgcttgg ctaaatttaa ggtttcatcc atcacacaag gatcacccgc atgaaagcca
    16381 caagcgacat ttactgaact tacaaatttt aaaatttctt catccattcc cattttatag
    16441 gcgccaaaac tttcccctaa atcactattt aaatccactt tgaacattat ttgaccttgt
    16501 atatttaatt attgatttta ttatatctaa agaagaattt taaataagct aaaagttttg
    16561 aaaaataaat aaaaaagtta caataagtaa aaaatgatat tttaagcagg ttaaaacctg
    16621 cttaattttt agtcttttct tgtttttgca tcaattacaa ataaaggttt attaagaagt
    16681 ttaaaatcag caatgaaatt taaagtctta tcacttgtta cccatttgat aaatttacta
    16741 gcttctgtat aatttacatt tttacaatgc ttaggatttg tcgctataac agaataaaaa
    16801 tttttaagac tatcatcgcc ttcatttaca atgactaagt ttggtttgcc tttttcattg
    16861 gcttcatatt tgatataagt accacgatcg gttaaaatca cacctttttt ttcttcagcg
    16921 attttaatgc ttgctaacat accttgtccg ctttgttgat accagctttg cttttcagga
    16981 acaccgccaa gatttttcca aaggcttttt tctttattgt cagtgcctga tttatcgcct
    17041 cttgagatga aagtaagctt ttcatttttg ataagttcta agctttcttt taaattttta
    17101 cctttaaatt tagaagctaa agatttatct gcgatgatga taaaatcatt atacatcaca
    17161 ggagttctat ctacaccaaa gccttttttc ataaattctt tttcagcctt tggagaatgc
    17221 acaaaaagca catcagcatt gcaatcttca cccattttta aagccgcacc tgttcctacg
    17281 gcaacccatt ttaaggtatt gccactttct ttttcataaa gaggttttag agcatctaaa
    17341 agtcctgtat tgtcagtgct tgttgtagtt gccattttaa gttctgctgc acttgcactt
    17401 aaagctaaag caagggctaa agaaatgatt tttttcattt tttttcctta taaatttata
    17461 taaaaaaata ttttagcata attatgctaa aattacttat tttaaaaagg atatttttgg
    17521 attatatttt tgatggtttt aaacaggctt tatttttact tttcaatgct gatgaaagcg
    17581 taatttcagc tataaaaact acacttttaa gctcaagtat ttctatagtt ttagctttgc
    17641 ttataggttt tcctttggga tttatcttag gtttttttga atttaaattg aagcgtttta
    17701 taaaacttat agttgatact agcctttctt ttccaacagt tgcagtagga cttatacttt
    17761 atgcactgat ttcaagtcga ggacctttgg gagaatttgg attgcttttt actataaagg
    17821 ctttaatttt agggcagttt atcttagcgc ttcctatagt gatcgcactt ttttcaaatt
    17881 tgatagaaaa tatgaataaa aaacattttt tacttataaa atcttttcac ctaagtcctt
    17941 taaaacttgt tttaacgatg atttatgaat tacgctttgc tttgattagc gtcgttgcac
    18001 tagcttatgg acgcattgta gcagaagtag gagtagcgat gatagtaggt ggaaatatca
    18061 aatacgatac tagaaccata accacagcta tttctcttga aacaaacaaa ggcgaatttg
    18121 ctagcggtat agctttggct ttggttttaa ttctcattgc cttttgttta aatttcatca
    18181 cgcacaaact caaaagaaca taaaatgata gaaatttcta atcttttttt caactatcaa
    18241 aacaaagaag ttttaaaaat caaaaattta aaacttgata caagtaaaat tagcatctta
    18301 atgggagcga atggaagtgg aaaatctaca tttttaagaa tattaaaatt tttagaagga
    18361 gatttttcaa aaaatatttc ttattttgga aattttaaac ctaataataa gcaaaagcgt
    18421 gaaatttatt tgctttttcc agagcctatt ttgttaaatc gtagtgtaag ggcaaatttt
    18481 ttatttacct taaaaactta tgggattaaa gaagatattg aagaacgcat aaaagaaagt
    18541 ttgatgtttt taaatttaga tgaaagtttt ttaagtaaac atcctaatga actttcatca
    18601 ggacaaagtc aaaaaatagc ttttgctata gctttaagcg taagagcgaa gtattattta
    18661 cttgatgaac caagtgcttt tttggataaa aatactacac ttttatttaa aaaaactatt
    18721 cttaaaatgc atgaaaattt caatacaggt tttttaatcg caagtcatga taaacatttt
    18781 ttagattctt tggcgcaaaa aaaactttat ttgcacagtg gagaaatttt agaatttgaa
    18841 aatactaatg tttttgaact agaaaatcaa ggtgtgaaat tttgtaat
//
LOCUS       DAPIVO010000036        18801 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.036, whole genome shotgun sequence.
ACCESSION   DAPIVO010000036 DAPIVO010000000
VERSION     DAPIVO010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18801)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18801)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18801
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.036"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            63..710
                     /locus_tag="RJ239_001091"
     CDS             63..710
                     /locus_tag="RJ239_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HDV7331217.1"
                     /translation="MKKGIFLLVFLSVFFSACSTKNDEGLYNLSASEWYKQIIKDLQD
                     KDLEKADDHYNGMASEHVADPLLETTLIILAQAHMDEEEYKLAEFYLDEYNKKFGNSR
                     NADYIRYLKIKAKFDAFAVPNRNQALMLESQKEIDTFLKDYPYTEYEPLVQTMLTKFN
                     LAVFYLNSTIENLYQRIGHDESAQIYKQRLQESEFYQQSIIKPELPWYRSIFERF"
     gene            727..3102
                     /gene="lon"
                     /locus_tag="RJ239_001092"
     CDS             727..3102
                     /gene="lon"
                     /locus_tag="RJ239_001092"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HDV7331218.1"
                     /translation="MQIEEIQNYPANLPVLVEDELFLYPFMITPIFINDSSNMKALDL
                     AIKNDSMLFVAPSKLENGRNFDEIYNCGVIGTIMRKVPLPDGRVKILFQGYAKGKIIE
                     QISNKPLEAKIELIKEDFLEGTKKEALLEVLKEKVKNLANISHYFSPDLLRTIEEGFD
                     ASRICDLILNTVRIKKQVAYEFFVLTDLEQKLVKLIDLIAQEIEANKIQKEIKNKVHS
                     RIDKVNKEYFLKEQLRQIQKELGSDTQKEDEVREYQKRLELKKKFMHEDAYKEIKKQI
                     EKFERIHQDNSEASMIQTYIETALDIPFEKISKKKLDIKEVSKQLNHDHYALNKPKER
                     IEEYFAVRELLEKRKIAEKDGAKVILCLYGPPGVGKTSLANSVSKALKRELIRIALGG
                     LEDVNELRGHRRTYIGAMPGRITQGLIEAKQINPVIVLDEIDKLNRSFRGDPSAVLLE
                     ILDPEQNSKFRDYYLNFNIDLSKVIFIATANDISNIPAPLRDRMEFIELSSYTPSEKF
                     HIMKKYLVPDELKKHGLKSNELSIDDETIELIISDYTRESGVRNLRRKVAELCRKSAK
                     KLLLENIKKVIINTKNLNEFLDKKVFEIEKNNGENQVGQVNGLAWTSVGGDVLKVEAV
                     KIKGKGELTLTGSLGDVMKESARIAFSMIKVLIDEGKIKIPKKIIIDPKVNVYDSYNI
                     HIHVPDGATPKDGPSAGITISTAIASIFSDKKVKADVAMTGEIDLKGKVLPIGGLKEK
                     LIAAYKADIKTALIPRKNYERDLKDIPSEVRDNMEIIAVDTFSDVLEYTLI"
     gene            complement(3163..3423)
                     /gene="rpsR"
                     /locus_tag="RJ239_001093"
     CDS             complement(3163..3423)
                     /gene="rpsR"
                     /locus_tag="RJ239_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HDV7331219.1"
                     /translation="MAEKRKYSRKYCKYTEAKVEFIDYKDTAMLKHALSERFKIMPRR
                     LTGTSKKYQEMVEVAIKRARHVALIPYIVDRKEVINNPFEGL"
     gene            complement(3434..3985)
                     /locus_tag="RJ239_001094"
     CDS             complement(3434..3985)
                     /locus_tag="RJ239_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDV7331220.1"
                     /translation="MFNKVVLVGNLTRDIEMRYAQSGSAIGASAIAVTRRFTTNGEKR
                     EETCFIDISFYGRTAEVANQYLTKGSKVLIEGRLRFEQWSDQNGQNRSKHSIQVENME
                     MLGNSNAPQQGGNFGNNSFSNNNYSGNYENQSYDPYMSENQNFNKAKTNPTPQRNQNP
                     QHEEKLKEIDIDAYDSDDTNLPF"
     gene            complement(3994..4371)
                     /locus_tag="RJ239_001095"
     CDS             complement(3994..4371)
                     /locus_tag="RJ239_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HDV7331221.1"
                     /translation="MKHYEVLFILKPTLTEEEVNAKLEFVKEVLIKNGAEIETVVPMG
                     TRKLAYKIKKYERGTYFVIYFKAPTNLIAELERVLRITEEVIRFLIVKYENKKEIAAW
                     EKLSHGIKQSKKEIKPLDAPEIQ"
     gene            4600..5037
                     /locus_tag="RJ239_001096"
     CDS             4600..5037
                     /locus_tag="RJ239_001096"
                     /inference="COORDINATES: protein motif:HMM:NF015581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HDV7331222.1"
                     /translation="MKKILVLLFMCFSSLFANDDFIYEKSKYNFNELIKRVEQELKDR
                     NLTIFAKFNHYQNALDVNLTLKSNTVIVFGNPIVGTYLMQENPMIGIELPLKILIWQD
                     QNNETFIGYVSLKSKIQKYHIKNTVLVDKIDSLMKDIINISKK"
     gene            5052..6407
                     /locus_tag="RJ239_001097"
     CDS             5052..6407
                     /locus_tag="RJ239_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HDV7331223.1"
                     /translation="MKHYEVIIIGFGKGGKTLAAKLAMLGKKVALIEEDENMYGGTCI
                     NVGCIPSKSLVKNSLCADKNANWEIKQNFYYNAILEEKQLSAMLRQKNYDKLNALENI
                     TLYLGKASFINEKTLLIQGEKEVQISADRIYINTGSIPIIPDIKGLDQSKNVLTSKEL
                     MAQENLPKHLVIIGGGYIALEFACIYANFGSKVTLLQRNDTFLGKEDKDFADLIFQNL
                     ENKQIDIRLGVQFKEIKDFDQKSIVFFTQDHQDFEIECDMILLATGRKANTLGLSCDK
                     AGIQLDKRGFIIVDDTLKTNKDSIYALGDVNGGLQFTYVSLDDYRIAYAPFRQQNYTK
                     SKRKVIPYSVFIDPPFSRVGLNEKESIDAGYRIKVVKLPVVAIPKAQVLKKTYGLLKA
                     IINEENDEILGAMLFCEESHEMINIVKLAMDTNLKYQVLRDQIYTHPTMSESFNDLFD
                     I"
     gene            complement(6385..7257)
                     /locus_tag="RJ239_001098"
     CDS             complement(6385..7257)
                     /locus_tag="RJ239_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK family antimicrobial peptide resistance
                     protein"
                     /protein_id="HDV7331224.1"
                     /translation="MNKKFSYPIPNFTDRRKSIIFWRYLRFQARKILYFPQVRLLEKT
                     LNEEKNKHLKDFFSQRPYACYNAIRRFCDKSFKANERVKTLIYDVDKGLTCFKFLPEE
                     QMIFSFDEDFELFLGYNHNVYEEGFWAFSLKFKKYTISQCNFCFTLENNLLLSCIQGY
                     KYKDFNILEINKILTKKCHGLRPVALLIECSKMLCEILKLQATLGVHEKNQIRSQKGK
                     EKGYFVDYQKIWLENGGELIKIDKHKYYKLHHSQKNLEEIPSQKRSMYKKRFTMLEGI
                     RQNLKNLFRYQINH"
     gene            complement(7250..8356)
                     /gene="rseP"
                     /locus_tag="RJ239_001099"
     CDS             complement(7250..8356)
                     /gene="rseP"
                     /locus_tag="RJ239_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HDV7331225.1"
                     /translation="MRSLLFLIVILILGIKFYSIEFLATVLVISFLIFFHELGHFLAA
                     RSLGVKVEVFSIGFGKSLIEREFKGTNYRLSTLPLGGYVKLKGQDDMRPGFENLDKDS
                     YSILSPLKKIYILFAGPFFNLILAFFLYIIIGNLGLNKLAPQIGSIAPNSAAQDIGLQ
                     KNDTILEINGIRIQSFDEISKHLSLEPLKILIDREGKNLEFILTPKIGQGYNDFGQIV
                     EKPQLGVSPNGTSTLVKHQGLESFKYAAQESFQASTLIIKGIVKLISGEVEAKNLGGI
                     ITMTEITSKAAQNSFTLLLFITALISINLGILNLLPIPMLDGGHILFNLYEMIFRRKI
                     PQRAFEYLSYAGMAILLSLMLFATYNDISRIAGE"
     gene            complement(8353..8889)
                     /gene="pgsA"
                     /locus_tag="RJ239_001100"
     CDS             complement(8353..8889)
                     /gene="pgsA"
                     /locus_tag="RJ239_001100"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HDV7331226.1"
                     /translation="MNLPNILAIFRMVLAPLLFFLLIHHFENIHQSWINYFAALTFSL
                     AALSDFFDGYIARTWKQTTKLGGILDPLADKMLVLAAFLGLLLTGKANEWVIYIILVR
                     EFFITGFRVVMISENLNVNASFAGKLKTAFQMTAIGFLIMEWIGGEILLYIALILTLY
                     SGFEYIYTYIKAQKKGEK"
     gene            complement(9014..9619)
                     /locus_tag="RJ239_001101"
     CDS             complement(9014..9619)
                     /locus_tag="RJ239_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDV7331227.1"
                     /translation="MKKELEIFSTRYSCRNFKNEKLKKEDLNSILEIARLSPSSLGLE
                     PWKFIVVQDEKRKEELSKICNQQKHVKDCAALIIIISRLDFLDYFEEKLRKRDMSETE
                     MQKRLDTYMPFLKSLNQEQKISYAREQAHIALASILYSANALNIASCTIGGFDKEKLD
                     SYLSLDIQKERSSLVVALGYCNDKKNPQKNRFSFDEVVKFI"
     gene            complement(9619..10239)
                     /locus_tag="RJ239_001102"
     CDS             complement(9619..10239)
                     /locus_tag="RJ239_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDV7331228.1"
                     /translation="MNFKELISKRRACKLFNDKKINEKDLHFILESGVLAPSSHGFEP
                     WKFVVLEQKEHNLKLSTLCYNQQNVASASHNIIFLARKDLQSKDEFAQKQVRRFSGSS
                     EENFQKILEIYTHKTNAMNDNELYHYAQLQCYLAMMQMSLAAMSLGIDSCMIGGFEKA
                     KVDNFLNLTYPFETAVILSLGYKAHEPKYSTQRLNFNEVVEFYKEK"
     gene            complement(10303..10728)
                     /locus_tag="RJ239_001103"
     CDS             complement(10303..10728)
                     /locus_tag="RJ239_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV7331229.1"
                     /translation="MKEIKLKEDLEKIYPLIKQLRNNLSLKDFLDKIQLATQTQHYKL
                     FAYENEGSYKAACGVMPFNVLYHNHCLYICDFVVDEALRGKGIGQAFLKKIQIWAKDQ
                     GYEELELSSSFFRTQAHEFYIQKMGFEKSGFVFKKNIKL"
     gene            complement(10740..11828)
                     /locus_tag="RJ239_001104"
     CDS             complement(10740..11828)
                     /locus_tag="RJ239_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HDV7331230.1"
                     /translation="MKHLLYLIGDELTINEKFKNYIYRTYEEKFKEINEIRIQSKTDK
                     DLPFLLENLLNQYDFITLFTSPLHYATVAKILATLNDDNLILKDDTLVPDKAEFSKNS
                     FVCNFSNSKINVVKINPSEKLPNLLGHIKLNFAYFCIFGMDDESAILLLQTLTKSYEI
                     NIKLTKLLDNLVLIKATCANFGKLDGFLNSVKNLFGQKVFLGKDPIHFISSKLLEKKL
                     KISFAESCTGGLCASTLTKISGVSEIFEGSIVSYSNRIKHEWLGISESILENNGEYSE
                     RCVYFMLKGIFKTANPDFALAISGVVGEKDEGKIKSGTIYIGAMFRDGTFIQETLYLD
                     GDREFMQEQAVLATFCLLLKLKPEIFEI"
     gene            11927..14680
                     /gene="ileS"
                     /locus_tag="RJ239_001105"
     CDS             11927..14680
                     /gene="ileS"
                     /locus_tag="RJ239_001105"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HDV7331231.1"
                     /translation="MDYKETLLLPSTTFAMRANLAELEPQRFKKWFEQNYAYETMKEN
                     RKNAKKSFTLHDGPPYANGHIHIGHALNKILKETIIKTHYFKGESVRFTPGWDCHGLP
                     IEQQVEVKLGEKKKSLSKKEIREFCRQHASEFVDIQREEFKNLGIIADWDKPYLTMKF
                     EFEAAIYRTLCEIAKKGLLCERSKPVFWSWAAKSALAEAEVEYQDKEDYSIFVAFDLD
                     VKACEKLGVSKASAVIWTTTPWTLVANQAIALNPNENYVITKEGLIFASALLKSMVEK
                     GLTSGEIQKELNAKEFEKLEAINPLNGRKSVLIMGEHVLMDGGSGLVHTAPGHGEDDY
                     YACLKYGIEVLMPVDDGGCYDETLRAKELLPSHLLEEFIGLHIFKANEKILELLGAKL
                     LHSSKFIHSYPFCWRTHKPVIYRATKQWFILMDEPKLQGKTLRECAKEQLLKTTFYPQ
                     SGVKRIGSMVENRPDWCISRQRDWGTPIAFFRDKNTKEVIFDDELFDFVAAIFEKHGA
                     DAWWEFEIKDLIPTNSKYNAENLEKVYDILDVWFDSGSTFNAVLNSGLYDAGEKRASM
                     YLEGSDQHRGWFQSSLLVGTAINESAPYESILTHGFTTDEKGQKMSKSKGNVIAPEYV
                     AKTYGVEILRLWILLSDYSSDLKISDNILKQVGEQYRKIRNTIRFLLANTNDLKDLKV
                     KEFSFIDKWILSRATKVFKASKEAFFAYEFAKGFSLLLNFLSADLSGIYLDISKDRLY
                     CDSENAQRRKSAQVAMALIAKELLNLLAPNLSYSVDEALEHANVLIKGDAKDVFDLSL
                     TQDFDYDFGIDDTFLMSAREKFFEQIDILKKDKIIKSTLELNLNISFNKFPNEELADW
                     FMVSQISNENEEILAEFEVENEKFKITKASLCKCPRCWKLQSKDEETPCLRCEEVLKG
                     IQC"
     gene            14674..14784
                     /locus_tag="RJ239_001106"
     CDS             14674..14784
                     /locus_tag="RJ239_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331232.1"
                     /translation="MLENPIPNSIIITTIAVVLAFSALAVFLIKKTKENK"
     gene            14781..16142
                     /gene="gatA"
                     /locus_tag="RJ239_001107"
     CDS             14781..16142
                     /gene="gatA"
                     /locus_tag="RJ239_001107"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HDV7331233.1"
                     /translation="MITLKEALKYSKEELENLKKELNEKAKKEKKIGAYIEQFLDKDL
                     SVSGEGVPVAIKDNISVKGWELTSASKILQGYIAPYDASVIVNLKANGFSPFGRCNMD
                     EFAMGSSTASSYYGKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPA
                     AFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSA
                     NIEFIKTAPNLNANKKLKIAVIENYVNDADSEVKNALLKTIDMLKANGHEIVYKNLLD
                     SKFDIAAYYIIATAEASANLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFGEEVKRRI
                     LLGTFVLSSGYYDAYYIKAQKARAFIKAKYEEILQDCDLIFMPVTPTTAFKFDTQKSP
                     MQTYLEDVYTISVNLAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLLDGALSLEQM
                     IKH"
     gene            16152..17609
                     /gene="guaB"
                     /locus_tag="RJ239_001108"
     CDS             16152..17609
                     /gene="guaB"
                     /locus_tag="RJ239_001108"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HDV7331234.1"
                     /translation="MKIVKRALTFEDVLLRPGYSEVLPKEVKIHTKLTKNITLNMPLI
                     SAAMDTVTEHRAAIMMARLGGLGVIHKNMDIASQVREVKRVKKSESGVIIDPIFVSPK
                     ASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDLRFESDFSNLVENVMTKMPLITA
                     PKGCTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKKRKEYPDANKDNFGRLRV
                     GAAIGVGQMDRVNALVEAGVDVVVLDSAHGHSKGIIDTVKAIKAKYPNLDLIAGNIAT
                     AAAAKALCEAGVDAVKVGIGPGSICTTRIVSGVGVPQISAIDECVEEANKFGVPVIAD
                     GGIKYSGDIAKALAVGASSVMIGSLLAGTDESPGELFTYQGRQYKSYRGMGSLGAMQK
                     GSSDRYFQQGTAQDKLVPEGIEGRVPYVGSIRSVVHQLLGGLRSSMGYVGAKDIEDFQ
                     KRAEFVEITTAGLKESHVHDVTITHEAPNYKVNHQ"
     gene            17606..17779
                     /gene="xseB"
                     /locus_tag="RJ239_001109"
     CDS             17606..17779
                     /gene="xseB"
                     /locus_tag="RJ239_001109"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HDV7331235.1"
                     /translation="MSFEENLKHANESLEKLNNQELALDESVKIYKEGLESIKKARLE
                     LEKAKLEVEQIDE"
     gene            17772..18548
                     /locus_tag="RJ239_001110"
     CDS             17772..18548
                     /locus_tag="RJ239_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HDV7331236.1"
                     /translation="MSKIAALQFPTLALSESRLDYYLKASKDNGVNLVVLGEYVINSF
                     FTELLHMPKNMIKEQSEAKKESLIKLAKKYELEIIAPYVSVEAKSYKKLCLKVTPNGV
                     KSYEQQILMPYEHWNEEKFFSNKTPSELKIFTFNYEKLKCALLFGFETHFDIFWQQIM
                     AKKIDLVIVPSACTFESKQRWEELLKTRAFLNSTSILRVNRIGKTKDEWNFYGDTLFI
                     NAFGEIESKLGSEEEMLIIEPKKSDEARKLWGFDKILKNF"
     gene            18560..>18801
                     /locus_tag="RJ239_001111"
     CDS             18560..>18801
                     /locus_tag="RJ239_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HDV7331237.1"
                     /translation="MRKILLQIFIFSVLFIVTFTINRILMQNSFIPTGLISDKNEIFL
                     MYLLGVFHDIRFLSAAFLPFLLCGFLSLIFSNIKIN"
BASE COUNT         6688 a         2500 c         3246 g         6367 t
ORIGIN      
        1 gaagaacata attataaaat cgttaaaata tatatttttg agaatataaa tcaaggtgaa
       61 gtatgaaaaa aggtattttt ttattggttt ttttaagtgt tttttttagt gcgtgtagta
      121 cgaaaaatga tgaaggttta tacaatctta gtgctagtga gtggtataag caaattatta
      181 aagatttgca ggacaaggat ttggaaaaag ctgatgatca ttataatggt atggcaagtg
      241 agcatgttgc cgatccttta ttggaaacta ctttaattat tttagcacaa gctcatatgg
      301 atgaagagga atataagtta gctgaatttt atttagatga atataataaa aaatttggaa
      361 attcacgcaa tgctgattat attcgttatc ttaaaattaa ggcaaaattt gatgcatttg
      421 cagtgccaaa tcgtaatcag gctttaatgc ttgaaagcca aaaagaaata gatacttttt
      481 tgaaagatta tccttataca gaatatgaac ctttggttca aacaatgctt acaaaattta
      541 atttagcggt tttttatctt aatagtacta tagaaaatct ataccagcgc atagggcatg
      601 atgaaagtgc acaaatttat aaacaaagac ttcaagaaag tgaattttat cagcaaagta
      661 ttatcaaacc tgagcttcct tggtatagaa gtatatttga aagattttaa taaacaagga
      721 aaataaatgc agattgaaga gatacaaaat tatccagcaa atttaccagt attggttgaa
      781 gatgaattat ttttatatcc ttttatgata actcctattt ttattaacga ttcatccaat
      841 atgaaagctt tagatcttgc gattaaaaat gatagcatgc tttttgttgc accttcaaag
      901 ttggaaaatg gaagaaattt tgatgaaatt tataattgcg gagtgattgg gactatcatg
      961 cgaaaagttc ctttacctga tggaagggtg aaaatacttt ttcaaggata tgctaagggt
     1021 aaaattatag agcaaatttc taataaacct ttagaagcca agatagaact tataaaagaa
     1081 gactttttag aaggaactaa aaaagaagcg cttcttgaag ttttaaaaga gaaggtaaaa
     1141 aatttggcaa atattagtca ttatttttct ccggatcttt taagaacaat tgaagaaggt
     1201 tttgatgcgt ctaggatttg tgatttgatt ttaaatactg tgcgtattaa aaaacaagtt
     1261 gcttatgagt tttttgtttt aacagatctt gagcaaaaat tagtaaaatt aatagattta
     1321 attgcccaag aaatagaagc caataaaatt caaaaagaaa ttaaaaataa agtacattct
     1381 cgtattgata aggtaaataa agaatatttt ttaaaagaac aattaagaca aattcaaaaa
     1441 gagcttggtt ctgatacaca aaaagaagat gaggttagag agtatcaaaa gcgtctggag
     1501 ttaaagaaga aatttatgca cgaagacgct tataaagaaa tcaaaaaaca aattgaaaaa
     1561 ttcgaacgca ttcatcaaga taattccgaa gcatcgatga ttcaaactta catagaaaca
     1621 gcattagata ttccttttga aaaaatttct aagaaaaaac ttgatattaa agaagtttca
     1681 aaacagctca accatgatca ttatgcatta aataaaccaa aagaacgcat agaagaatat
     1741 tttgcagtta gggaactttt agaaaaaaga aaaatagcag aaaaagatgg tgctaaagtt
     1801 atactttgtc tttatggacc tcctggcgtg ggtaaaactt cactggcaaa ttctgtttca
     1861 aaagctttaa aaagagagct tattcgcata gccttaggcg gacttgaaga tgttaatgag
     1921 ctacgtggtc atcgtagaac ttatataggc gctatgcctg gacgtattac ccaaggactc
     1981 atagaggcaa aacaaattaa tcctgtaatt gtattggatg aaattgataa attaaatcgc
     2041 agttttagag gcgatccaag tgcggtgctt ttagaaattt tagatccaga gcaaaattct
     2101 aaatttaggg attattattt aaattttaat attgatttaa gtaaagtcat ttttatagca
     2161 acagcaaatg atattagcaa tattcctgca cctttaagag atagaatgga atttatagaa
     2221 cttagctctt atactccaag tgaaaaattt catataatga aaaaatattt agttccagat
     2281 gagcttaaaa aacatggctt aaaatccaat gaattatcta ttgatgatga aactatagag
     2341 ttaatcatta gtgattatac tcgtgaatca ggagttagaa atttgcgtcg caaagtggca
     2401 gagttgtgtc gtaagagtgc taaaaaacta cttttagaaa atattaaaaa agtcattatt
     2461 aatacaaaaa atttgaatga atttttagat aaaaaagttt ttgaaataga aaaaaataat
     2521 ggagaaaatc aagtaggtca ggttaatggt ttggcttgga caagtgtagg tggagatgtt
     2581 ttaaaagtag aggctgtaaa aattaaaggt aaaggagaat taacgctcac gggaagtttg
     2641 ggtgatgtaa tgaaagaatc agctagaatt gcttttagca tgataaaagt tttaatcgat
     2701 gaaggaaaaa taaaaatacc taaaaaaata attatcgatc ctaaagttaa tgtttatgat
     2761 agttataata ttcatatcca tgtgccagat ggagctactc caaaagatgg tccaagtgcg
     2821 ggcattacga taagcacagc tattgcttct atttttagtg ataaaaaggt taaagcagat
     2881 gttgcaatga caggtgaaat agatttaaaa ggaaaagttt taccaatagg cggattaaaa
     2941 gaaaaattaa ttgcagctta taaagcagat ataaaaacag ctttaatccc aagaaaaaat
     3001 tacgaaaggg acttaaaaga tattcctagt gaggttagag acaatatgga aatcattgct
     3061 gttgatactt ttagtgatgt cttagaatat actttgattt aattttattt tgagaataaa
     3121 tgtataagaa agcaaacttt ttacaagttt gcttttaaaa gattatagtc cttcaaaagg
     3181 attattgatt acttcttttc tatccactat ataagggata agagctacat gtcttgcacg
     3241 tttgattgca acttctacca tttcttggta ttttttgctt gtacctgtta aacggcgtgg
     3301 catgatttta aatctttcag ataaagcatg ttttaacatt gctgtatctt tataatcaat
     3361 aaattcaact tttgcttcag tgtatttgca atatttgcga gagtattttc ttttttctgc
     3421 catagtttat cctttaaaat ggtaaattag tatcatcgct atcataagca tcgatatcaa
     3481 tttcttttaa tttttcttcg tgttgtgggt tttggtttct ttgtggagta gggtttgttt
     3541 ttgctttatt aaaattttga ttttcactca tataaggatc atagctttga ttttcatagt
     3601 ttccactata attgttgttt gaaaagctat tattgccaaa atttccgcct tgttgtggag
     3661 cattggaatt gccaagcatt tccatatttt caacttgaat gctatgttta gagcgatttt
     3721 gtccattttg atcactccat tgttcaaatc tcaaacgtcc ttctatgagt acttttgaac
     3781 cttttgtaag gtattggttt gcaacttctg cggtgcgacc ataaaaactt atatcaataa
     3841 agcaagtttc ctctcttttt tctccatttg tggtaaatct tcttgttact gcgatagcag
     3901 aagctccaat agcactaccg ctttgtgcat aacgcatttc tatatcgcgt gtaagatttc
     3961 caaccaaaac aactttgtta aacatctttt tccttattga atttcaggag catctaaagg
     4021 tttgatttct tttttagatt gcttaatccc gtggcttagt ttttcccaag ctgcaatttc
     4081 ttttttgttt tcatatttta cgattaaaaa tcttattact tcttcagtga ttcttaacac
     4141 cctttcaagc tcagcgatca agtttgtagg agctttgaaa taaatcacaa aataagttcc
     4201 tctttcatat tttttgattt tatacgctaa ttttctagtg cccattggaa caacagtttc
     4261 aatttctgca ccatttttga ttaggacttc tttaacgaat tccaactttg cattcacttc
     4321 ctcttcggta agcgttggtt ttaagataaa taaaacctca taatgtttca tcttttctcc
     4381 ttatggatat aaagcccatt tttatgagca aggattttgc attaaagcaa gagcaaatta
     4441 tactataata tacttaattt atacttcaat gaagttaata tgtaaattat cattgccatt
     4501 atcaaacaat taataagcaa tggatttgtt ttgatttact ttcgactgtt ataatgcaat
     4561 gttttttaaa atacgacctt aattgagcaa ggattaaaat tgaaaaaaat attggttttg
     4621 ttgtttatgt gttttagcag tttatttgca aatgatgatt ttatttatga aaaaagtaaa
     4681 tataatttta atgagctgat aaaaagagtt gagcaagagc ttaaagatag aaatttaacg
     4741 atttttgcaa aatttaatca ctatcaaaat gcattagatg ttaatttgac cttaaaatca
     4801 aatacagtta tagtgtttgg taatcctatt gtaggaactt atttgatgca agaaaatcca
     4861 atgataggta ttgaattacc tttaaaaatt ttaatctggc aagatcaaaa taatgaaact
     4921 tttataggtt atgtcagttt aaaatcaaaa atacaaaaat atcatattaa aaatactgtt
     4981 ttagtagata aaatagattc tttaatgaaa gatatcatca atataagcaa aaaataaatt
     5041 aaggaagaga aatgaagcat tatgaagtta ttattattgg ctttggtaag ggtggaaaaa
     5101 ctttagcggc aaaacttgca atgctaggaa aaaaagttgc tcttatagaa gaagatgaaa
     5161 atatgtacgg agggacttgc attaatgttg gttgtattcc ttctaagtct ttggtaaaaa
     5221 actctctttg tgctgataaa aatgcaaatt gggaaataaa acagaatttt tattacaatg
     5281 ctattttaga agaaaaacaa ttaagtgcaa tgttaagaca aaaaaattat gataagttaa
     5341 atgctttaga aaatattact ctatatcttg gaaaagcttc ttttattaat gaaaaaactt
     5401 tgttaataca gggcgaaaaa gaagttcaaa ttagtgccga tagaatttat attaatacag
     5461 gctcgattcc tattatacca gatataaaag gactagatca aagtaaaaat gtattaacaa
     5521 gcaaagaatt aatggcacaa gaaaatttac ctaagcatct tgttatcata ggtggaggtt
     5581 atattgcttt agaatttgct tgtatttatg ctaattttgg ttctaaggta accttattgc
     5641 aaaggaacga tactttttta ggtaaagaag ataaagattt cgcagattta atttttcaaa
     5701 atttagaaaa taaacagatt gatattagat taggagttca atttaaagaa attaaagatt
     5761 ttgatcaaaa aagtatagtg ttttttactc aagatcacca agatttcgaa attgaatgtg
     5821 atatgatctt attagcaacg ggaagaaagg caaatactct tggattaagt tgcgataaag
     5881 ccggcattca actcgataaa agaggtttta ttattgttga tgatacttta aaaacaaata
     5941 aagattctat ttatgctcta ggtgatgtaa atggaggttt acaatttact tatgtttctt
     6001 tagatgatta tagaatagct tatgctccat ttaggcaaca aaattataca aaatctaaaa
     6061 gaaaggttat tccttatagt gtctttatcg atcctccttt ttcaagagtt ggattaaatg
     6121 aaaaagaatc aattgatgca ggttatagaa ttaaagtggt aaaattgcct gttgtagcaa
     6181 tccctaaggc acaagttctt aaaaaaactt atggtttact aaaagcaatc ataaatgaag
     6241 aaaatgacga aattttagga gcaatgcttt tttgtgaaga atctcatgag atgattaata
     6301 ttgttaaact tgctatggat actaatttaa aatatcaagt tttaagagat caaatttata
     6361 ctcacccaac aatgagtgag tcttttaatg atttatttga tatctaaata aattttttag
     6421 attttgccta ataccttcaa gcatagtgaa acgtttttta tacatggagc gtttttgcga
     6481 agggatttct tctaggtttt tttgcgagtg gtggagcttg tagtatttgt gtttatcgat
     6541 ttttattaat tctccaccat tttctagcca aattttttga taatctacaa aatagccttt
     6601 ttcttttcct ttttgagaac ggatttgatt tttttcatgt acacctaaag tagcttgaag
     6661 ttttaaaatt tcacaaagca tcttagagca ttctataagt aaagcaacag ggcgcaaacc
     6721 atgacatttt ttagttaaaa ttttattaat ttctaaaata ttaaaatctt tgtatttata
     6781 tccttgtatg caagaaagta gaagattatt ttctaaagta aagcaaaaat tacattgtga
     6841 aatagtgtat tttttaaatt ttaaagaaaa agcccaaaaa ccttcttcgt aaacattatg
     6901 gttatatcct aaaaaaagct caaaatcttc atcaaaagaa aaaatcattt gttcttcggg
     6961 aagaaattta aaacaagtaa gtcccttatc aacatcataa ataagtgttt taacgcgttc
     7021 atttgcttta aaacttttat cgcaaaatct tcttatagca ttgtagcaag catagggtct
     7081 ttgagagaaa aagtctttta aatgtttatt tttttcttca ttaagcgttt tttctagaag
     7141 ccttacttga ggaaaatata gaatttttct tgcttgaaaa cgcaaatagc gccaaaagat
     7201 gatacttttt cttctatcag taaaatttgg aatagggtag gaaaattttt tattcacctg
     7261 caatccttga tatatcatta taagttgcaa agagcattaa gcttaaaagt attgccatgc
     7321 ctgcgtaact taagtattca aaagcacgct gtggaatctt gcgtctaaaa atcatttcat
     7381 aaagattaaa aagtatatgt cctccatcaa gcataggaat aggtaaaaga tttaaaatac
     7441 ctaaatttat agaaattaaa gcagtgataa ataaaagcaa agtaaagcta ttttgtgcag
     7501 cctttgaggt aatttcagtc atggtgataa taccgcctaa attttttgct tcaacttcac
     7561 cacttatgag ttttacaata cccttgatga taagtgtgga agcttgaaaa ctttcttgtg
     7621 cggcatattt aaaactttct aaaccttggt gttttacaag agtgcttgtc ccatttggac
     7681 tgactccaag ttgaggtttt tcaacgattt gtccaaagtc attatatcct tgtcctattt
     7741 ttggagttaa aataaattct aaattttttc cttctctatc gattaatatt ttcaaaggct
     7801 ctaaacttaa atgctttgaa atttcatcaa agctttgaat tcttataccg ttaatttcta
     7861 agatagtatc atttttttga agtcctatgt cttgtgcagc agagtttggc gctatgcttc
     7921 ctatttgcgg agcaagtttg tttagaccta aatttcctat gataatataa agaaaaaaag
     7981 ctaaaattag attaaaaaat ggtccagcaa aaagaatata aatctttttt aaaggactta
     8041 aaatgctata gctatctttg tctagatttt caaaaccagg acgcatatca tcttgtcctt
     8101 taagtttaac atatcctcca agtggtaaag tgcttaagcg atagtttgtg cctttaaatt
     8161 cacgctctat aagacttttt ccaaatccta tactaaaaac ttcaactttt acacccaaag
     8221 atcttgcagc caaaaaatgt cctaattcgt gaaagaaaat taaaaatgag atgactaaaa
     8281 cagttgctaa aaattcaata gaataaaatt taattcccaa aatcaaaata acaattaaaa
     8341 ataataaaga tctcattttt ctcctttttt ttgagctttt atataagtat agatgtattc
     8401 aaatccagaa taaagagtta aaatcaaagc tatgtaaagt agaatttcac cgcctatcca
     8461 ctccatgatt aaaaatccta tcgcagtcat ttgaaaagcg gttttaagtt tgcctgcaaa
     8521 agaagcattg acatttaaat tttcgctaat cattacaact ctaaaacctg tgataaaaaa
     8581 ttcccttact aatataatat aaattaccca ttcattagct tttcctgtaa gtaaaagccc
     8641 taaaaaagct gctaaaacaa gcattttatc ggctaatgga tctaagattc caccaagttt
     8701 tgtagtttgt ttccaagttc ttgcgatgta tccatcaaaa aaatcactta aagctgctaa
     8761 tgaaaaagtt aaagcagcaa aatagttaat ccaactttga tgaatatttt caaaatgatg
     8821 aattaataaa aaaaatagca aaggcgctaa aaccattcta aaaatcgcca agatattggg
     8881 taaattcata acaagccttg tgaaattaaa tgtaaaatta taatcaaaat tgtataaaat
     8941 ttaagcaaag acttagtaaa aatacaaaaa agaatcagtt tatttttatt taaattttgc
     9001 ttaaaagcaa aatttaaata aattttacaa cttcatcaaa actaaaacga tttttttgag
     9061 gatttttttt atcgttgcaa tatcctaaag ccaccaccaa acttgatctt tctttttgaa
     9121 tatcaagtga taaataagaa tcaagctttt ctttatcaaa accacctata gtgcagcttg
     9181 ctatatttaa agcattagca ctgtaaagta tgctagctag agctatatga gcttgttctc
     9241 ttgcataaga tattttttgt tcttgattta gagattttaa aaaaggcata taagtatcta
     9301 agcgtttttg catttctgtt tcactcatat ctctttttct aagtttttct tcaaaataat
     9361 ccaaaaaatc aagtcttgaa atgattataa ttaatgcagc acaatctttt acatgttttt
     9421 gttgattgca aattttagaa agttcttctt ttcttttctc atcttgcact actataaatt
     9481 tccaaggttc cagtcccaag gagcttgggc ttaatcttgc tatttctaaa atagaattta
     9541 aatcctcttt tttgagtttt tcatttttaa aatttctaca agaatatctt gtgctaaaaa
     9601 tttcaagttc ttttttcatt atttttcctt gtaaaattcg acgacttcat taaaatttaa
     9661 gcgttgagta gaatattttg gttcatgggc tttatatcct aaggataaaa ttacagcagt
     9721 ttcaaaagga taagttaaat taagaaaatt atcaacttta gctttttcaa agccacctat
     9781 catacaagaa tcaataccta agctcattgc agctagcgac atttgcatca tagcaagata
     9841 gcattgaagt tgtgcgtaat gatagagttc attatcattc attgcattgg ttttatgggt
     9901 gtaaatttct aaaatttttt gaaaattttc ttcgctagaa cctgagaaac gacgcacttg
     9961 tttttgtgca aattcatctt tgctttgaag atcttttctt gctagaaaaa tgatattatg
    10021 actcgcactt gctacatttt gttgattgta acatagggtt gagagtttaa gattgtgttc
    10081 tttttgttct aatactacaa atttccaagg ctcaaatcca tgtgagcttg gggctaagac
    10141 tccactttct aagataaaat gcaaatcctt ttcattgatt tttttatcat taaaaagttt
    10201 acaagctctg cgttttgaaa ttagttcttt aaaattcatt ttattcctta aaatcaaaaa
    10261 taataatatt aattataaaa tgcaaagctt aatcaaaaaa tattatagtt tgatattttt
    10321 cttaaaaaca aaaccggatt tttcaaaacc cattttttgg atataaaatt catgagcttg
    10381 tgttctaaaa aaacttgaac ttagttctaa ttcttcatat ccttgatctt ttgcccaaat
    10441 ttggattttt ttcaaaaaag cttgacctat accttttcct cttaaagctt catctacgac
    10501 aaaatcacaa atataaagac aatgattatg ataaagtaca ttaaagggca tgactccaca
    10561 agctgctttg tagcttccct cattttcata ggcaaaaagt ttataatgtt gagtttgtgt
    10621 agcaagttgg attttgtcta aaaaatcttt caaagatagg ttatttctta attgttttat
    10681 caagggataa attttttcca agtcttcttt tagcttaatt tctttcattt ttaaatccct
    10741 taaatttcaa aaatctcagg ttttaatttt aaaagtaggc aaaaagttgc caaaacagct
    10801 tgttcttgca taaattcacg atctccatct aaataaagcg tttcttggat aaaagttcca
    10861 tctctaaaca ttgcacctat ataaatagtg cctgatttta tttttccctc atctttttcg
    10921 ccaactactc cgctaatagc taaggcaaaa tcaggattag ctgttttaaa aatacctttt
    10981 agcataaaat aaacacaacg ttcactgtat tcgccattat tttctaagat gctttcgcta
    11041 attccaagcc attcgtgttt gatgcggttg gaataactta caatagatcc ttcaaaaatt
    11101 tcacttacac ctgaaatttt ggttaaggtg cttgcacaaa gtccgcctgt gcaactttca
    11161 gcaaaagaaa tttttaattt tttttctaaa agtttagagc ttataaaatg tataggatct
    11221 ttacctaaaa acaccttttg tccaaaaaga ttttttacgc tatttaaaaa accatcaagt
    11281 tttccaaaat tagcgcaagt ggccttaata agcacaagat tatctaaaag cttggttaat
    11341 tttatattta tctcataaga ttttgttagg gtttgcagta gtaatatagc gctttcatca
    11401 tccatgccaa aaatgcaaaa atatgcaaaa tttaatttta tatgcccaag aagattgggt
    11461 aatttttcgc ttggatttat tttaacgaca ttgatttttg aatttgaaaa attacacaca
    11521 aagctatttt tactaaattc tgctttatct ggaaccaagg tatcatcttt taagataaga
    11581 ttatcatcat ttaaagttgc taaaatttta gcaacagtcg cataatgcaa agggcttgta
    11641 aataaagtga taaaatcata ctgatttaag aggttttcaa gcaaaaaggg taaatcttta
    11701 tcggttttac tttgtatgcg aatttcgttg atttctttaa atttttcttc ataagttcta
    11761 taaatataat ttttgaattt ttcgtttata gtaagctcat ctcctataag ataaagcaaa
    11821 tgtttcataa attttccttt ttttcttata attatagcca aaaacaaagt agaaattaaa
    11881 gctaatttga gtagaattta agattattaa aaattaggtg gaaaaaatgg actacaaaga
    11941 aactctactt ttgcccagca ctacttttgc tatgcgggcg aatttagcgg aacttgaacc
    12001 gcaaagattt aaaaaatggt ttgagcaaaa ttatgcttat gaaacaatga aagaaaatcg
    12061 caaaaatgcg aaaaaaagtt ttactttaca cgatggcccc ccttatgcta acggacatat
    12121 ccatatagga catgctttaa ataaaatttt aaaagaaact attatcaaaa cacattattt
    12181 taaaggtgag agtgtgcgtt ttactccagg gtgggattgt cacggtttgc ctatagaaca
    12241 acaagtagaa gtaaagcttg gagaaaagaa aaaaagctta agtaaaaaag aaattcgtga
    12301 gttttgcaga caacatgcga gtgaatttgt agatatccaa agagaagaat ttaaaaattt
    12361 aggcattatt gcggattggg ataagcctta tttaactatg aaatttgagt ttgaagcagc
    12421 gatttataga actttatgtg agattgctaa gaaaggctta ctttgtgagc gttctaaacc
    12481 tgttttttgg agttgggcgg caaagtcagc tttagcagaa gctgaggtag aatatcaaga
    12541 taaagaagat tattctatct ttgtggcttt tgatttggat gtaaaagctt gcgaaaaatt
    12601 aggtgtttca aaagcaagcg cagtgatatg gacaactacg ccttggactt tagtggctaa
    12661 tcaagctata gctttaaatc ctaatgaaaa ttatgtgatc accaaagaag gtttgatttt
    12721 tgcaagtgct ttacttaaaa gtatggtaga aaaaggactt acaagtggag aaattcaaaa
    12781 agaattaaac gcaaaagaat ttgaaaaact tgaagctatc aatcctttaa atggaagaaa
    12841 atctgtttta attatgggtg agcatgtatt gatggatggt ggaagtggac ttgtgcatac
    12901 tgcaccagga catggcgaag atgattacta tgcttgtttg aaatacggta ttgaagtttt
    12961 aatgcctgtt gatgatggtg gatgttatga tgaaacttta agagctaaag agcttttgcc
    13021 ttctcatttg cttgaagagt ttataggtct tcatattttt aaggctaatg aaaaaatttt
    13081 agaactttta ggcgcaaaac tgttacattc ttctaaattt atacactctt atccgttttg
    13141 ctggagaaca cataaacctg taatctatag agctactaaa caatggttta ttttaatgga
    13201 tgagccaaaa cttcaaggaa aaaccttaag agagtgtgca aaagaacaac ttttaaaaac
    13261 aactttttat ccgcaaagtg gggtaaaaag aataggttct atggtggaaa atcgcccaga
    13321 ttggtgtatt tcaagacaaa gggactgggg aacgcctata gcctttttta gagataaaaa
    13381 cactaaagaa gtcatttttg atgatgagct ttttgacttt gtagcggcta tttttgaaaa
    13441 acacggcgct gatgcgtggt gggagtttga aatcaaagat ttaattccta caaattcaaa
    13501 atacaacgct gaaaatttag aaaaagtata tgatatttta gatgtttggt ttgatagtgg
    13561 aagtactttt aatgcggttt taaatagcgg actttatgac gcaggagaaa aaagagcaag
    13621 tatgtattta gaaggaagcg atcaacatcg gggttggttt caaagctctt tgcttgtagg
    13681 tacagcgatc aatgaaagtg caccttatga aagcatttta actcatggtt ttaccaccga
    13741 tgaaaaaggg caaaaaatgt ctaaatctaa aggcaacgtg atcgctcctg aatatgtagc
    13801 aaaaacctat ggagttgaaa ttttaagact ttggatactt ttaagtgatt attcaagtga
    13861 tttaaaaatt tcagacaata tcttaaaaca agtaggcgaa caataccgca aaataagaaa
    13921 cactataaga tttttacttg ccaataccaa tgatttaaaa gatttaaaag ttaaagaatt
    13981 tagttttatt gataaatgga tattaagccg tgcaactaaa gtttttaaag caagcaaaga
    14041 ggcatttttt gcttatgaat ttgctaaagg ttttagtttg cttttaaatt tcttaagtgc
    14101 ggatttaagt gggatttatc ttgatatcag taaagataga ctttattgtg atagcgaaaa
    14161 tgcccaaaga agaaaatctg ctcaagtggc tatggctttg atagcaaaag agcttttaaa
    14221 tttacttgct ccaaatttaa gctatagtgt agatgaggct ttagaacatg ctaatgtttt
    14281 aatcaaaggc gatgcaaaag atgtatttga tctaagttta actcaggatt ttgattatga
    14341 ttttggtata gatgatacat ttttaatgag tgctagagag aaattttttg aacagattga
    14401 tatacttaaa aaagataaaa tcattaaatc tactttggaa ttaaatttaa acatcagttt
    14461 taataaattc ccaaatgagg aattagccga ttggtttatg gtaagtcaaa tcagcaatga
    14521 aaatgaagaa attttggctg aatttgaagt agagaatgag aaatttaaaa tcaccaaagc
    14581 ttcactttgt aaatgcccaa gatgttggaa acttcaaagt aaagatgaag aaacaccttg
    14641 tttaagatgt gaagaagttt taaaagggat tcaatgctag aaaatcctat tccaaatagc
    14701 attatcatca caactatagc ggtggttttg gcttttagtg ctttagcggt atttttgatc
    14761 aaaaaaacaa aggaaaataa atgataactt taaaagaagc tttaaaatac tccaaagaag
    14821 aacttgaaaa tttaaaaaaa gaactcaatg aaaaagcaaa aaaagaaaaa aaaataggtg
    14881 cttatatcga acaattttta gataaagact taagtgtttc aggtgaaggt gtgcctgtag
    14941 ctataaaaga taatatcagc gtaaagggct gggagcttac tagtgcgagt aagattttac
    15001 aaggttatat cgctccttat gatgcaagtg tgattgttaa tttaaaagct aatggttttt
    15061 ctccttttgg gcgttgcaat atggatgaat ttgctatggg aagttcaaca gcgagttctt
    15121 attatggcaa aactttaaat cctttaaatt ttgagcgtgt gccaggtggt tcaagtggtg
    15181 gaagtgctgc tgcggtagcg ggtggcttgg ctttggcaag tttgggttct gatacaggag
    15241 gatctgtacg tcagcctgca gctttttgtg gttgcgtagg atttaaaccg agttatggaa
    15301 gagtgagtcg ctatggctta gcttcttatt cttcaagttt ggatcaaatt ggggttttaa
    15361 cgcaaaatgt agaagatgcg gcaattttat atgatgcgat cgcaggatat gataaaatgg
    15421 atagcacgag tgcaaatatc gagtttatca aaaccgctcc aaatttaaat gcaaataaaa
    15481 aattaaaaat tgcagtgatt gaaaattatg tcaatgatgc agatagtgaa gtaaaaaacg
    15541 cacttttaaa aaccatagat atgttaaaag ctaatggaca tgagattgta tataaaaatt
    15601 tgcttgattc taagtttgat atcgcagcgt attatatcat cgcaacagct gaagcaagtg
    15661 caaatttaag tcgttatgat ggggtgcgtt atggcaagcg ttctgaaaat atccaaaatt
    15721 taaaagaaat gtatgtaaat acacgcagcg aaggttttgg agaagaagta aaaagaagaa
    15781 ttttgttagg aacttttgtt ttaagcagtg gatattatga tgcgtattat attaaagcac
    15841 aaaaagctag agcttttatt aaggcaaaat atgaagaaat tttgcaagat tgtgatctta
    15901 tttttatgcc tgtaacgcct acaacggctt ttaaatttga tactcaaaaa agccctatgc
    15961 aaacttattt agaagatgtt tatactatct ctgtaaattt agcaggactt ggaggcatta
    16021 gtgtgcctgt tgcaaaagat aaagaagggc ttaatatatc agcacaactg atttgcaaag
    16081 cttatgatga acaaacctta ttagatgggg ctttaagttt agaacaaatg attaaacatt
    16141 aaggatgaaa gatgaaaatt gtaaaaagag ctttaacttt tgaagatgta ttattgcgtc
    16201 ctgggtattc tgaagtttta cctaaggaag taaaaattca cactaaatta acaaaaaata
    16261 tcactttaaa tatgccttta atctctgcgg ctatggatac agttactgaa cacagggctg
    16321 ctattatgat ggcaagactt ggagggcttg gagtgattca taaaaacatg gatatagcct
    16381 cacaggttag agaagtaaaa agagtgaaaa aaagcgaaag cggggtgatt atcgatccta
    16441 tttttgtaag tcctaaggca agtgttgcgg aagctttaga aattatggca gagtatagaa
    16501 tttcaggtgt tcctgtagta gatgaagata agaaactaat aggcatactt accaatcgtg
    16561 atttaagatt tgagagtgat ttttcaaatt tggttgaaaa tgttatgact aaaatgcctt
    16621 taattactgc tccaaagggt tgtactttag atgatgcgga aaaaattttc agcaccaaca
    16681 aagtagaaaa acttcctata gttgatgaac aaggacgctt ggaaggactt atcactataa
    16741 aagatcttaa aaaacgcaaa gaatatcctg atgccaataa agataatttt ggcagattac
    16801 gcgtgggtgc ggctatagga gtagggcaaa tggatcgtgt gaatgcttta gttgaagcag
    16861 gcgttgatgt tgttgtgctt gattctgcgc atgggcattc taagggtatt attgatacag
    16921 taaaagcaat taaggctaaa tatccaaatt tagatcttat cgcaggaaat atcgccactg
    16981 cagctgcagc aaaagcactt tgtgaagcag gagtagatgc ggttaaagta ggtattgggc
    17041 caggaagtat ttgtactaca cgtattgttt caggtgtggg cgtgcctcaa atttcagcca
    17101 ttgatgagtg cgtggaagaa gcaaataaat ttggcgttcc tgtgatagct gatggcggga
    17161 ttaaatattc aggtgatatc gcaaaagctt tagctgtagg tgcgagttct gttatgatag
    17221 gatcgctttt agctggaaca gatgagagtc caggagagct ttttacttat caaggaagac
    17281 aatataagtc ttatcgtggt atgggctcac ttggggctat gcaaaaggga agttcggata
    17341 gatattttca gcaaggtact gctcaagata aactcgttcc tgaaggtata gaagggcgtg
    17401 ttccttatgt gggaagtata agaagcgtgg tgcatcaact tttaggaggt ttgcgttctt
    17461 ctatgggtta tgttggggct aaagatatag aagattttca aaaaagagcc gaatttgttg
    17521 aaattaccac tgcagggctt aaagaaagtc acgtgcatga tgttactatc actcatgaag
    17581 caccaaacta caaggttaat catcaatgag ttttgaagaa aatttaaaac acgctaatga
    17641 atctttggaa aaattaaata atcaagagct tgccttagat gaaagtgtaa aaatttataa
    17701 agaaggttta gagagtatca aaaaagcaag acttgagctt gaaaaagcaa aattagaagt
    17761 ggagcaaatc gatgagtaaa atagcagctt tacagtttcc aactttagct ttaagtgaat
    17821 caaggcttga ttattatctt aaagcttcaa aagacaatgg agtaaattta gtagttttgg
    17881 gagaatatgt gatcaacagt ttttttacag aacttttgca tatgccaaaa aatatgataa
    17941 aagaacaaag cgaagctaaa aaagaaagct tgattaaact tgctaaaaaa tacgaattag
    18001 aaattatcgc tccttatgta agcgttgaag ctaaaagtta taaaaaactt tgcttaaaag
    18061 ttactccaaa tggtgtgaaa agttatgaac agcaaatttt aatgccttat gaacattgga
    18121 atgaagaaaa atttttcagc aacaaaactc catcagaatt aaaaattttt acttttaatt
    18181 atgaaaaatt aaaatgtgct ttgctttttg gttttgagac acattttgat attttttggc
    18241 aacagattat ggcgaaaaaa attgatttgg ttatcgttcc tagtgcttgt acctttgaaa
    18301 gcaaacaaag atgggaagaa cttttaaaaa caagagcttt tttaaattct acaagcattt
    18361 taagagtaaa tcgcataggc aaaacaaaag atgagtggaa tttttacggc gatactttgt
    18421 ttattaatgc ttttggtgag atagaaagta aattaggttc tgaagaagaa atgcttatta
    18481 tagagcctaa aaaaagtgat gaagcaagaa aactttgggg ttttgataaa attcttaaga
    18541 atttttaaag aaggtgaata tgagaaaaat tttacttcaa atttttattt ttagtgtatt
    18601 atttatagta acttttacca ttaatcgtat tttaatgcaa aattctttta tccctactgg
    18661 tttaattagt gataaaaatg aaatcttttt aatgtatctt ttaggtgttt ttcatgatat
    18721 aagattttta agcgcagcgt ttttaccatt cttgctttgt ggttttttaa gtttaatttt
    18781 ttctaatata aaaataaata a
//
LOCUS       DAPIVO010000037        18347 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.037, whole genome shotgun sequence.
ACCESSION   DAPIVO010000037 DAPIVO010000000
VERSION     DAPIVO010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18347)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18347)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18347
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.037"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            68..1434
                     /locus_tag="RJ239_001112"
                     /pseudo
     CDS             68..1434
                     /locus_tag="RJ239_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012006639.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            1576..2328
                     /gene="peb3"
                     /locus_tag="RJ239_001113"
     CDS             1576..2328
                     /gene="peb3"
                     /locus_tag="RJ239_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AcfC family glycoprotein adhesin PEB3"
                     /protein_id="HDV7331238.1"
                     /translation="MKKIITLFGACALAFSMANADVNLYGPGGPHTALKDIANKYSEK
                     TGVKVNVNFGPQATWFEKAKKDADILFGASDQSALAIASDFGKDFNVSKIKPLYFREA
                     IILTQKGNPLKIKGLKDLANKKVRIVVPEGAGKSNTSGTGVWEDMIGRTQDIKTIQNF
                     RNNIVAFVPNSGSARKLFAQDQADAWITWIDWSKSNPDIGTAVAIEKDLVVYRTFNVI
                     AKEGASKETQDFIAYLSSKEAKEIFKKYGWRE"
     gene            2425..3519
                     /locus_tag="RJ239_001114"
     CDS             2425..3519
                     /locus_tag="RJ239_001114"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HDV7331239.1"
                     /translation="MKTFLVCALEPSANLHLKEVLKAYKKDFGEFELHGIYDESLCKE
                     FDLNSKPLYSSHEFSAMGFIEVLPLIFKAKKAIKELANLSFTQKINGILCIDSPAFNI
                     PFAKALKKAGSKIPRIYYILPQVWAWKKGRIPIIESHFDILASILPFDNQFFNKSTYI
                     GHPLLDEIKEFKNQEDINHTFSKKDDEKTIAFLPGSRRSEIRRLMPIFKELSQKFKGK
                     KILCVPSFNLEKLEVYGDISEFKIESNTPKVLKKADFAFICSGTATLEAALVGTPFVL
                     AYKAKAIDIFIAKLFVKLKHIGLANIFCDFAGKEALNPEFLQDKVNVLNLYEAYNKYD
                     YKAFFAKVDFLKEYLQFGSAKNLAKILNEI"
     gene            3531..4016
                     /gene="greA"
                     /locus_tag="RJ239_001115"
     CDS             3531..4016
                     /gene="greA"
                     /locus_tag="RJ239_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HDV7331240.1"
                     /translation="MQKEPMSQFGYDKLAAELKDLKDNQRPAVVIEIDTARSHGDLKE
                     NAEYHAAREKQALIESRIAELSDLLARAQVIDPSSYEHDSVKFGSSVVIMDLDTEKES
                     KYTLVGICEGNLDKGYISIASPIAKAMLGKKEGDDFKVRLPKGESEFEILSINYEPLK
                     F"
     gene            4167..4784
                     /locus_tag="RJ239_001116"
     CDS             4167..4784
                     /locus_tag="RJ239_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HDV7331241.1"
                     /translation="MLIGEISATHEFAKPYIELLEELALKIEIIYLEGNHDFNLSCFF
                     KRVKIFNLQEQPIKLNLHTSKGNNLVLNSAFIKLAHGDIFLPPLLQFTLKTLRNHYLL
                     VFLNFLNIITRNFISNKILQNQNKKNLFYQIKDFENLAKKRYEKYENLGFWVCEGHYH
                     QNHQINKENIKYLNLASFAYERSFFVVEYQQEIKFREQKLRGQNV"
     gene            4777..5733
                     /locus_tag="RJ239_001117"
     CDS             4777..5733
                     /locus_tag="RJ239_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheV"
                     /protein_id="HDV7331242.1"
                     /translation="MFDENIVKTGSNEMELVDFRIFKQGHDKVYEGIYGVNVSKVREI
                     IKIPSLTELPGVPDYIEGIFDLRGVVIPVVNLAKWMQITEPESTMLKPRVIITEFSNI
                     LIGFIVHEAKRIRRINWKDIEPATFSTGSGALDKGKITGVTRIENDEVLLILDLESVV
                     EDLGIYAPKTDIDFGKIEKFTGTALILDDSMTARKRVKEMMQQMGFQVVEAKDGVEGI
                     NKLEELSQIYGESLNDTLKIIVSDVEMPQMDGFHFAARIKEDPRFKDIPIVFNSSLSN
                     EFMNEKGVQEAGGEGYLVKFNASDFFNEIAKVIKKHQSQEQG"
     gene            5737..8046
                     /locus_tag="RJ239_001118"
     CDS             5737..8046
                     /locus_tag="RJ239_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDV7331243.1"
                     /translation="MEDMQEILEDFLVEAFELVEQIDHDLVELESNPEDLELLNRIFR
                     VAHTVKGSSSFLNFDVLTKLTHHMEDVLNKARHGELKITPDIMDVVLESIDRMKTLLN
                     SIRDNGNDTAIGMDIEPICARLTAISEGESPVVATDSNEKSIPQAELEAPKQEIATPE
                     PEVDVNQLSDSEVEAEIERLLKVRKAEDQARRAQKKQTTNAAPKPTNNTANKPTESGE
                     KKVPASGSNASSMDQTIRVEVKRLDHLMNLIGELVLGKNRLLKIYDDVEERYEGEKFL
                     EELNQVVSQLSIITTDVQLAVMKTRMQPIAKVFNKFPRVVRDLSRELGKQIELEITGE
                     ETELDKSIVEEIGDPIMHMIRNSCDHGVEDPATRAANGKPEKGIVQLKAYNEGNHIVV
                     EITDDGKGLDPNGLKAKAIEKNLITEREADQMTDKEAFALIFKPGFSTAAKVTNVSGR
                     GVGMDVVKTNIEKLNGVIEIDSELGKGSSFKLKIPLTLAIIQSLLVGTQEEFYAIPLA
                     SVLETVRVPIDDIYTIEGKNVLRLRDEVLSLVRLSDVFGVKQVLESGDQTYVVVIGVA
                     ESKLGIIVDTLVGQEEIVIKSMGDYLQNIQGIAGATIRGDGRVTLIIDVGAMMDMAKE
                     IKVDIKAQLESSAKKPKEQPSDYKVLIVDDSKMDRTLMQKALEPLGVSLIEATNGVEA
                     LNIIKSGEHDIDAMLIDIEMPRMDGYTLAGEIRKYSKYRNLPLIAVTSRTSKTDRLRG
                     VEVGMTEYITKPYSPEYLENVVRKNLKLG"
     gene            8051..8572
                     /locus_tag="RJ239_001119"
     CDS             8051..8572
                     /locus_tag="RJ239_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-binding chemotaxis protein CheW"
                     /protein_id="HDV7331244.1"
                     /translation="MSNEKLEQILQKQQTQMAGPDVDQREDDIIQLVGFVVGDEEYAI
                     PILNIQEIIKPIEYTRVPSVPDYVLGVFNMRGNVMPLIDLAQRFHLGSSKMTPQTRYI
                     VLRGETNGTGVGGNAGFVIDRLTEAIKIHRNRIDPPPETLVKDKGMIYGIGKRDENIL
                     TILKVEALLKREF"
     gene            8572..9195
                     /gene="serB"
                     /locus_tag="RJ239_001120"
     CDS             8572..9195
                     /gene="serB"
                     /locus_tag="RJ239_001120"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HDV7331245.1"
                     /translation="MIKLCVFDFDATLMDGETIDILATAHGKGNQTSEITRHAMTGEL
                     DFFESLQKRVSFLKGMSYKKVLELSSTLPLMRGAHELIQYLKSKNIQIVIFSGGFHEG
                     INPAMQKLGINLGFANYLHHKNDILTGLVGGEMMFSNSKGLMLQRLKSFLNLKTDEVM
                     CVGDGANDLAMFNESGLKIAFCAKEILRSQADICIDIKDLKEIIKVI"
     gene            9195..10172
                     /locus_tag="RJ239_001121"
     CDS             9195..10172
                     /locus_tag="RJ239_001121"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HDV7331246.1"
                     /translation="MKNFSLWCDFIENSFLDNEFLNLLSHGINGATSNPAIFKNAILN
                     SPIYKDKILKLKEKKTKDIYEELAISDIQKAADKLAPLFYQKNDGFISIEIDPRLHDN
                     TTLSLGEAKRLYSAIGKENIMIKIPATKASYEVMYELMKNGISVNATLIFSLEQSQKC
                     FEALNAGLVEFRKNNIALKEQNTRTPQAVISIFVSRFDRLLNPKAKEQNRIGILNANL
                     AYNNIYSKNEPNIRALFASTGVKGDDLPKDYYIKELLFENSVNTAPLDAIEAFKGKMH
                     FKKPLMNFEIYTELNQIISQSEREKACNDLLSDGLEQFCIAFEDILKAL"
     gene            complement(10173..10595)
                     /locus_tag="RJ239_001122"
     CDS             complement(10173..10595)
                     /locus_tag="RJ239_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5 YciO YrdC YwlC family protein"
                     /protein_id="HDV7331247.1"
                     /translation="MIYLAQTDTTVGFLSKNLEEINALKGRDKNQPCLITSAKFCELK
                     SLARIPKSFKNLVRRSKKTTFIYPNNQAIRIVKECKHANFLSKNGYFYSSSANKHGKE
                     FDEEWARSVADIILDEKFFENIPSKILKLSKNKMIKIR"
     gene            complement(10592..13861)
                     /gene="carB"
                     /locus_tag="RJ239_001123"
     CDS             complement(10592..13861)
                     /gene="carB"
                     /locus_tag="RJ239_001123"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HDV7331248.1"
                     /translation="MPKRTDIKSILLIGSGPIVIGQACEFDYSGTQAAKTLKELGYRV
                     VLINSNPATIMTDPEFADATYIEPITKESILSIIKKEKIDAILPTMGGQVALNVAMEV
                     YESGLLGDVKFLGANPEAIKKGEDRQVFKECMKKIGMDLPKSMYAYNYDEALKAVDEI
                     DFPLMIRASYTLGGAGSGVVYNMDEFKELTNTALALSPIHEILIEESLLGWKEYEMEV
                     IRDRADNCIIVCSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFAILREIGVD
                     TGGSNVQFAINPKNGRMIVIEMNPRVSRSSALASKATGYPIAKVATLLAVGFSLDEIK
                     NDITGTPASFEPVIDYIVTKIPRFTFEKFPGANTTLGTAMKSVGEVMAIGRTFKESIQ
                     KALCSLERSLSGFDRVKFEDRNDLVFKIRNANEKRLLYVAQAFREGFSVEELYELCKI
                     DPWFLTQIKEIVDFEEQIDMDILNNKALLRKAKTMGFSDKMIALLVNLKDNLELSQND
                     IYYVRMKQKIIAEFSEVDTCAGEFEALTPYLYSSINVSELTQSKNDAKDKKEKKVMII
                     GGGPNRIGQGIEFDYACVHASFALKDMGIKTIMYNCNPETVSTDYDTSDILYFEPIDF
                     EHLRAVIEREKPDGVIVHFGGQTPLKFAKRLSAFGAKIIGTSARVIDMAEDRKKFAEF
                     ITKLGINQPKNSTATSVEEAVLKASDIGYPVLVRPSYVLGGRAMRVVNDEAELRLYMQ
                     EAVDVSDKSPVLIDQFLDNATEIDVDAICDGKDVYVAGIMEHIEEAGIHSGDSACSLP
                     PCNIDEKMQEFIAQKTADIALNLGVVGLLNIQFALHNNELYMIEVNPRASRTIPFVSK
                     ATGIPLAKVATRVMWQGNLKEALKFYDTFKVVNFDTKILRPKTPKYMSVKEAVFPFAK
                     LSGSDLELGPEMRSTGEVMGISKDFANSYAKSQIASFNHLPEQGVVFISLKDKDKKYT
                     KKIAAEYVKLGFKLMATGGTCKEILESGFECELVHKISEGRPNVEDKLKNGEIHLVIN
                     TSDSHSFKGDTKKIRENIIRFKIPYFTNLRSALAGAKSIKAIQSKSCLDVKSLQEWLK
                     S"
     gene            complement(14122..14871)
                     /gene="mreC"
                     /locus_tag="RJ239_001124"
     CDS             complement(14122..14871)
                     /gene="mreC"
                     /locus_tag="RJ239_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HDV7331249.1"
                     /translation="MKNKIFYVLVLAFLVFISFYYGGLIKQNVLRVNDFVIGNFYNIK
                     DYLGEKISEHFNQANQIQQLKARNKELEDIAVKVTSFANQLNRILEDQNSTKYLPQVS
                     LTRVISYVQLNDYKKLWLDWSKIPVGKNRGLIYQGYTAGIAINKNGRAMALLQGDDQC
                     VFSVYIGKSKAPGLIQGEDGRIVVKFIPKWAKINTGDEILTSGLDNIFFSDIPVGIVN
                     RVNDEDMYQSVEVKPYVKISIPAYLYVVDNL"
     gene            complement(14861..15901)
                     /locus_tag="RJ239_001125"
     CDS             complement(14861..15901)
                     /locus_tag="RJ239_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HDV7331250.1"
                     /translation="MILDQLIGFFSSDMGIDLGTANTLVLVKDKGIVINEPSVVAVER
                     ERYGSKAKILAVGKEAKDMVGKTPGNIEAIRPMKDGVIADFDMTEKMIRYFIEKTHRR
                     KSFLRPRIIISVPYGLTQVERKAVRESALSAGAREVFLIEEPMAAAIGASLPIQEPKG
                     NLVVDIGGGTTEIGVISLGGLVISKSIRTAGDKLDMSIVNYVKEKYNLIIGERTGEEI
                     KITIGSAIQLPKELSMVVKGRDQVSGLLSRIELTSEDVREAMREYLKEIADALKMVLE
                     MMPPDLASDIVENGVVLTGGGALIRGLDKYLSEIVRLPVYIADEPLLAVAKGTGKALE
                     EISLLQQLTNEE"
     gene            complement(15913..17136)
                     /gene="clpX"
                     /locus_tag="RJ239_001126"
     CDS             complement(15913..17136)
                     /gene="clpX"
                     /locus_tag="RJ239_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HDV7331251.1"
                     /translation="MPRKCSFCNEVENPQRRILANENDDAFICEYCVEGAYSIIYGEE
                     KEFKEPKQSHNTEFKDITPKELKAYLDRYVIGQDRAKKVFSVGVYNHYKRLFKAELQD
                     DDTELFKSNILLVGPTGSGKTLLAQTLAKFLDVPIAICDATSLTEAGYVGEDVENILT
                     RLLQAADGDVQRAQKGIVFIDEIDKIARMSENRSITRDVSGEGVQQALLKIIEGSLVN
                     IPPRGGRKHPNQEFIQIDTSNILFVCGGAFDGLETILKRKLGDKVVGFFDDAKEENKA
                     LLEKIEPDDLVHFGLIPELIGRLHVIASLNELNEEDMVRILTEPKNAIIKQYQKLFAI
                     DGVNLKFEEDALRAIAQLALERKTGARGLRSIIEEMMVDLMFELPEYKDYDIVITKEV
                     VKDNAKALLIKRKIS"
     gene            complement(17129..17920)
                     /gene="lpxA"
                     /locus_tag="RJ239_001127"
     CDS             complement(17129..17920)
                     /gene="lpxA"
                     /locus_tag="RJ239_001127"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HDV7331252.1"
                     /translation="MKKIHPSAVIEEGAQLGDDVVIEAYAYVSKDAKIGNNVVIKQGA
                     RILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINSGTAKG
                     DGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFV
                     KVGEGCMIAGASALSQDIVPFCLAEGNRASIRSLNLVGIRRRFDKDEVDRLSRAFKTL
                     FRQGDLKENAKNLLENQESENVKKMCHFILETKRGIPVYRGKNNA"
     gene            complement(17920..>18347)
                     /gene="fabZ"
                     /locus_tag="RJ239_001128"
     CDS             complement(17920..>18347)
                     /gene="fabZ"
                     /locus_tag="RJ239_001128"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HDV7331253.1"
                     /translation="QIQEILPHRYPFLLVDKITELKVKEVVLGYKNISISDHVFMGHF
                     PGHPIYPGVLILEGMAQTGGVLAFESMEDKVDPKSKVVYFTGIDGAKFRNPVRPGDRL
                     DYEMSVVKNRGNMWIFKGQAFVDGNLVAEAELKAMIVDK"
BASE COUNT         6282 a         3084 c         2863 g         6118 t
ORIGIN      
        1 ttttatttta tatcgattaa cattatttaa actataaaaa tataaagtta gtaaggatgg
       61 tttaaatatg tttgattttt tcaaacctaa ggcaaaagct attaaatttc ctctttagga
      121 aattttacct agatattaca aaatgagaac ttggagttta agtggggttt ttataggata
      181 tatgggatat tatcttgtgc gaaataatat cactctttca actccattta tacaaaatca
      241 acttaatctc agtaaatcag acatcggaac aatcacaggc tcaatgctta tagcttacgg
      301 gattagcaag ggtgcaatga gcgttataag cgacaaagct gatcctaaaa aatcatggct
      361 ttaggtctta ttttatgtgc tcttgtaaat gttttacttg gtttttcaaa ttctttttac
      421 gcttatgtag gttttgttat cgcgcttggg gtttttcaag gtatgggggt aggtccttct
      481 tttatcactc ttgcaaactg gtatcctaaa aaagagcggg gaatttacac ggccgtttgg
      541 aatatctcac ataatatagg aggcgggata gttgctccta tagtttcgct ttcaggtttt
      601 gctttggcag cattattggg tgtgagtatg gcaaatttta acgaaacata ttggcacatg
      661 aatcattttt atactcctgc tgcttgtgca gttatcatta gtctttatgc gctttatgca
      721 gttaaaggaa actaaaaatg aaggtttggt tgatattact gaaatcaatg aaatgcgagg
      781 gattaaaaca gaagaaatca aagctataga aactccaaat ttaagcagtt ttgaaatttt
      841 ttatcattat gtacttaaaa acaaaaatgc ttggtatgtg gcttggatgg atacttttgt
      901 ttatatggtg cgttttgggc ttatttcttg gcttcctatt tacttgctag aaacaaaagg
      961 ctttaataaa gaacaaatag gtattgcctt ttggcttttt gaatgggctg ctataccttc
     1021 tactttactt gcaggatata tttcagataa aatttttaaa ggctatagaa tgcctcctgc
     1081 tataggcgcc atggtgatta ttttctttat gattattgga tattttactt caaataatct
     1141 ttatatggtt attttctttg cagctatggc ggggtgttta gtctatatac cacaattttt
     1201 agcaagtatg caaactatgg aagtcgttcc tgcttttgca gtaggatctt gtgtaggact
     1261 tcatggcttt atgagttatg tagtcggcgc ttcacttgga acaaaagcat aggttgggct
     1321 gtggattact atggtagttg gaatgctggt cttatcatgc tccttagtgc ttgtattctt
     1381 tgtatacttt gttctacttt atgtcatttt agcgctaaaa agaagcatca ataacaattt
     1441 taacttttgc ttgcaaaaat accaagcaaa agttagattt taataatatt tttgttacat
     1501 tataactatt tattaacata caatttctaa aatcttacct tcaatcaata aaaatttatc
     1561 ataaaaggaa atactatgaa aaaaattatt actttatttg gtgcatgtgc cttagctttt
     1621 agtatggcaa atgcagatgt aaacctttac ggaccaggtg gcccacacac ggccttaaaa
     1681 gatatagcaa acaaatatag cgaaaaaaca ggcgttaaag taaatgtaaa ttttggccct
     1741 caagcgactt ggtttgaaaa ggctaaaaaa gatgcagata ttttatttgg cgcttcagat
     1801 caatcggctt tagctatagc gagtgatttt ggaaaagatt ttaatgtgag taaaatcaag
     1861 cctttatatt ttagagaagc catcatactt actcaaaaag gcaatccttt aaaaatcaaa
     1921 ggtttaaaag atttggctaa taaaaaagta agaatcgttg tgcctgaagg tgctggaaag
     1981 agcaatactt ctggaactgg agtttgggaa gatatgatag gtagaactca agatataaaa
     2041 accatacaaa attttagaaa caatatcgtg gcctttgttc caaatagtgg aagtgcaaga
     2101 aagcttttcg cacaagatca agccgatgct tggatcactt ggattgactg gtcaaaaagc
     2161 aatcctgaca taggaactgc cgtagctata gaaaaagatt tggttgttta tagaactttt
     2221 aatgtgatag ctaaagaagg tgcgagcaaa gaaacacaag attttattgc ttatttaagt
     2281 tctaaggaag ctaaagaaat ttttaaaaaa tacggctgga gagaataaac cttcatacac
     2341 gctttttagc gtgtattctt gcataacttc ttttaattaa gccaaaataa gataaaatgt
     2401 ttaaaatatt gataaggaaa ttttttgaaa acctttttag tttgtgcttt agagccttca
     2461 gcaaatttgc atttaaaaga agttttaaaa gcttataaaa aagattttgg tgaatttgaa
     2521 cttcatggga tttatgatga gagtttatgc aaagaatttg atttaaattc taaaccactt
     2581 tatagctcac atgaatttag tgctatgggt tttatagaag ttttaccttt gattttcaaa
     2641 gcaaaaaaag ctataaaaga acttgcaaat ttaagcttta ctcaaaaaat aaatgggatt
     2701 ttatgtatag attcacccgc ttttaacata ccttttgcta aagctttaaa aaaagcaggc
     2761 agtaaaattc cacgcattta ttatatcttg cctcaagttt gggcgtggaa aaaaggtcgc
     2821 atacctatca tagaaagtca ttttgatatt ttagcttcta ttttgccctt tgataatcaa
     2881 ttttttaaca aaagcaccta tataggccat ccgcttttag atgagataaa agaatttaaa
     2941 aatcaagaag acattaatca tacattttca aaaaaagatg atgaaaaaac tatagccttt
     3001 ttaccaggtt caaggcgtag tgaaattagg cgtttaatgc ctatttttaa agaactttct
     3061 caaaaattta agggtaaaaa aattctttgc gttccctcat ttaatcttga aaaattagaa
     3121 gtttatggtg atattagcga atttaagata gaaagtaaca ctccaaaagt gcttaaaaaa
     3181 gctgattttg cctttatttg tagtggaaca gctactttag aagcagcttt agtgggaact
     3241 ccttttgttc ttgcttataa ggcaaaggct atcgatattt ttatcgcaaa actttttgta
     3301 aaattaaaac atataggact tgcaaatatt ttttgtgatt tcgctggaaa agaagcttta
     3361 aatcctgaat ttttacaaga taaagtcaat gttttaaatt tatatgaagc ttacaataaa
     3421 tatgattata aggcattttt tgctaaagtt gattttttaa aagaatattt acaatttgga
     3481 agtgctaaaa atttagcaaa aatcctaaac gaaatataaa aggataaatc atgcaaaaag
     3541 aaccaatgag tcaatttggc tatgataagt tagccgcaga attaaaagat ttaaaagaca
     3601 atcaacgccc tgccgttgta atagaaatcg atacagcaag aagtcatggg gatttgaaag
     3661 aaaatgctga ataccatgct gcaagagaaa agcaagcttt gatagaaagt cgtattgcag
     3721 agcttagtga cttgctagca agagctcaag tgatcgatcc ttcaagctat gagcacgata
     3781 gtgtgaaatt tggttcaagt gttgtgatca tggatttgga tacagaaaaa gaaagcaaat
     3841 atactctagt aggaatttgc gaaggaaatt tagataaggg ttatatttcc atcgcatctc
     3901 caatagcaaa agctatgctt ggaaaaaaag aaggagatga ttttaaagtg cgtttgccaa
     3961 aaggtgaaag tgaatttgaa atcctttcta taaattatga gcctttgaaa ttttaaggat
     4021 aaaaaatttt actacaaaat ggagcgattt taatcgcaga tgctcatgaa aatgaacaaa
     4081 gaaagggatt ttgggaattt ttacaagcct taaaaaaagg taaaatttcc acccctcaac
     4141 tcatacttat aggtgatatt ttcgatttgc ttataggcga aatctctgct acacatgaat
     4201 ttgctaaacc ttacatagaa cttttagaag aattggcctt aaaaattgaa attatctact
     4261 tagaaggcaa tcatgatttt aatctttctt gtttttttaa aagggtaaaa atttttaact
     4321 tacaagagca gcccataaag cttaatttgc atacaagtaa aggtaataat cttgttttaa
     4381 atagtgcttt tataaaatta gctcacggag atattttttt accacctctt ttacaattta
     4441 ctctgaaaac attaagaaat cattatttgc ttgtattttt gaatttttta aatattatta
     4501 ctcgtaattt tatttcaaat aaaattcttc aaaatcaaaa caaaaaaaac cttttttatc
     4561 aaataaaaga ttttgaaaat ttagcgaaaa aaagatatga aaaatatgaa aatttaggat
     4621 tttgggtatg tgaaggacac tatcatcaaa atcatcaaat caacaaagaa aacattaaat
     4681 atcttaactt agctagtttt gcatatgaga gaagtttttt tgtagtagaa tatcagcaag
     4741 aaatcaaatt tcgagaacag aaattgaggg gtcaaaatgt ttgatgaaaa tatcgtgaaa
     4801 acgggttcaa atgaaatgga gcttgtcgat ttccgtatct ttaagcaagg gcacgataaa
     4861 gtctatgaag gaatttatgg tgtaaatgtt tctaaggtaa gggagattat aaaaatccca
     4921 agccttacag aacttccagg tgtacctgat tacatcgaag gaatctttga tcttcgtgga
     4981 gtggttatac ctgtagtcaa tcttgccaaa tggatgcaaa tcactgagcc agaaagcact
     5041 atgctaaaac ctagagttat tattactgaa tttagcaata ttcttattgg ttttatagtt
     5101 cacgaagcaa aaagaattcg tagaataaac tggaaagata tagaaccagc aactttttct
     5161 acaggatcag gtgctttaga taaaggtaaa attacaggtg taacacgcat tgaaaatgat
     5221 gaagtgttgc taattttaga tcttgaaagt gttgttgaag atttaggaat ttacgctcca
     5281 aaaacagata tagattttgg aaaaatagaa aaatttactg gaacagcact tatacttgat
     5341 gacagcatga ctgctagaaa acgcgtcaaa gaaatgatgc aacagatggg ctttcaagtt
     5401 gttgaagcta aggacggcgt agagggcata aacaaattag aagaattaag ccaaatttat
     5461 ggtgaaagtt taaacgatac tttaaaaatt atagtaagcg atgtcgaaat gccacaaatg
     5521 gatggtttcc actttgctgc acgcattaaa gaagatccaa gatttaaaga tattcctata
     5581 gtctttaact catctttatc aaatgaattt atgaatgaga aaggtgttca agaagctggt
     5641 ggagaaggct atcttgtcaa atttaacgct agcgatttct tcaatgaaat tgcaaaggtt
     5701 attaaaaaac atcaatctca agaacagggg taaaatatgg aagatatgca agaaatactt
     5761 gaagactttt tggttgaagc ttttgagctt gttgagcaaa tcgaccatga tttagtagag
     5821 cttgaatcaa atccagaaga tttagaatta ttaaatagaa ttttccgtgt tgcacatacg
     5881 gttaaaggat catcaagctt cttaaatttt gatgttttaa caaagttaac tcaccacatg
     5941 gaggatgttt taaacaaagc aagacatggc gagttaaaaa taactccaga tatcatggat
     6001 gtggttttag agtctattga tagaatgaaa actttactta attccattcg tgataatggc
     6061 aacgatactg ctattggtat ggatatagaa ccaatttgcg caagattaac agctatttca
     6121 gagggagagt ctcctgttgt ggcaacagat tcaaatgaaa aatctattcc acaagcagaa
     6181 ctagaagcac caaaacaaga aatagctact ccagaacctg aagtagatgt taatcaatta
     6241 agtgattctg aagttgaagc tgaaatagaa agacttttaa aagttagaaa agctgaagat
     6301 caagctcgtc gcgcacaaaa gaaacaaaca acaaatgcgg cacctaaacc gactaacaat
     6361 acagcaaata aacctacgga aagtggagag aaaaaagttc ctgcttcagg tagtaatgct
     6421 agcagtatgg atcaaaccat acgcgtggag gtaaaaagat tagatcactt aatgaatcta
     6481 attggagagc ttgttttagg caaaaaccgt ttgcttaaaa tttacgatga tgttgaagag
     6541 cgttatgaag gagaaaaatt ccttgaagaa cttaatcagg ttgtaagtca attaagtatt
     6601 attacaactg atgttcagct tgctgtgatg aaaacaagaa tgcaacctat agcaaaagtt
     6661 ttcaataaat tcccaagagt tgttcgtgat ttaagtcgtg aattaggaaa gcaaatagaa
     6721 cttgaaatta caggtgaaga aactgaactt gataaatcta tcgtagagga aattggcgat
     6781 cctatcatgc atatgattag aaattcatgt gatcatggtg ttgaggatcc agcaactcgt
     6841 gcagcaaatg gaaaacctga aaaaggtata gtacaactta aagcttataa tgaaggcaat
     6901 cacatcgttg tagaaattac agatgacggt aaaggacttg atccaaatgg cttaaaagca
     6961 aaagctatag agaaaaattt gattaccgaa agagaagcag atcaaatgac agacaaagaa
     7021 gcttttgctt tgattttcaa gcctggtttt tcaactgcag ctaaagtaac aaatgtttca
     7081 ggtcgtggtg taggaatgga tgttgttaaa accaacatcg aaaaacttaa tggggtaatt
     7141 gaaattgata gtgagttagg caaaggaagt tcatttaaac ttaaaattcc tcttaccttg
     7201 gcaatcattc aatctttact tgtaggaact caagaggaat tctatgcaat tccacttgca
     7261 agcgttcttg aaacagttag agtgccaatt gatgatatct atactatcga aggtaaaaat
     7321 gtattacgct taagagatga agtgctttct cttgtgagac tttcagatgt atttggagtt
     7381 aaacaagtcc ttgaaagcgg tgatcaaact tatgtcgttg ttataggggt agcagaaagc
     7441 aagcttggta ttatagtaga tactcttgta ggacaagaag aaatagttat taaatctatg
     7501 ggtgattatt tacaaaatat ccaaggtata gcaggagcta caatccgtgg tgatggtaga
     7561 gtgacattaa tcattgatgt aggtgctatg atggatatgg ccaaagaaat taaagttgat
     7621 attaaagcgc aattagaatc aagtgccaaa aaacctaaag aacaaccaag tgactataaa
     7681 gtcttaattg tagatgattc taaaatggat agaactttaa tgcaaaaagc tttagaaccg
     7741 ctaggagtta gtttaatcga agcaacaaat ggtgttgaag cattgaatat tataaaatct
     7801 ggcgaacatg atattgatgc aatgcttata gatatcgaaa tgccaagaat ggatggatac
     7861 accttagctg gtgaaattag aaagtattct aaatatcgca acttaccatt gatagcagtt
     7921 acttcaagaa caagtaaaac tgaccgttta agaggtgttg aagtgggtat gactgaatat
     7981 atcactaaac cttattctcc agaatacttg gaaaatgtgg ttagaaaaaa tttgaaacta
     8041 ggataagaat atgagtaatg aaaaattaga gcaaattttg caaaaacagc aaactcagat
     8101 ggctggtcct gatgtcgatc aaagagaaga tgatatcatc caacttgttg gctttgtagt
     8161 tggagatgag gaatatgcga ttccaattct taatatacaa gaaatcatca aacctataga
     8221 atatactaga gttcctagtg tacctgatta tgttctaggg gtttttaata tgcgtggtaa
     8281 tgttatgccg ctcattgatc tagctcaacg ctttcattta ggaagttcta aaatgacacc
     8341 tcaaacaaga tatattgttt taagaggtga gacaaatgga actggagttg gaggaaatgc
     8401 tggttttgtt atagatagat taactgaagc aattaaaatt cacagaaaca gaatcgatcc
     8461 accacctgaa actttagtta aagacaaagg tatgatttat ggtataggaa aaagagatga
     8521 aaatatctta actatactca aagtagaagc tttgcttaag cgcgaatttt aatgattaaa
     8581 ctttgtgttt ttgactttga tgctacttta atggatggtg aaaccatcga tattttagct
     8641 acagcgcatg gcaagggtaa tcaaacaagc gaaattaccc gccatgctat gactggagaa
     8701 cttgattttt tcgaaagtct tcaaaaacga gtaagctttt taaaaggtat gtcttataaa
     8761 aaagttttag aattaagtag cacacttcca ctaatgcgtg gagcacatga acttatccaa
     8821 tatttaaaat ctaaaaatat acaaattgtt atttttagcg gtggttttca tgaaggcata
     8881 aatcctgcta tgcaaaaact tggaattaac ctcggttttg caaattatct gcatcataaa
     8941 aatgacattt taacagggct agttggtggg gaaatgatgt tttcaaattc aaaaggctta
     9001 atgctacaac gattaaaaag ctttttaaat ttgaaaacag atgaagtgat gtgtgttggc
     9061 gatggggcaa atgatttggc aatgtttaac gaaagtggat taaagattgc attttgtgct
     9121 aaagaaattt tacgttctca agctgatatt tgcatagata taaaagactt aaaagaaata
     9181 ataaaggtaa tataatgaaa aatttttctc tttggtgtga ttttatagaa aatagttttt
     9241 tagataatga atttttaaat ttattatcac atggaattaa tggcgctact tcaaatcctg
     9301 ctatttttaa aaatgctatt ttaaattctc caatttataa agataaaatt cttaaattaa
     9361 aagaaaaaaa aacaaaagat atttatgaag aattagcaat ttctgatatt caaaaagcag
     9421 ctgataaatt agctcctctt ttttatcaaa aaaatgatgg atttataagt attgaaatag
     9481 atccaagact tcatgataac acaactctta gtttaggtga agctaaaaga ctttatagtg
     9541 ctattggcaa agaaaatata atgattaaaa ttccagctac aaaagcttct tatgaagtaa
     9601 tgtatgaact tatgaaaaat ggtattagcg tcaatgctac cttaattttt tctcttgaac
     9661 aaagtcaaaa atgttttgaa gctttaaatg caggtttagt cgaatttaga aaaaacaata
     9721 tagccttaaa agaacaaaac actagaacac cacaagctgt tataagtatt tttgtaagtc
     9781 gttttgatag acttttaaat cctaaggcta aggagcaaaa tcgtattgga attttaaatg
     9841 caaatttagc ttataacaat atctactcaa aaaatgaacc taatattcgt gccttgtttg
     9901 caagcaccgg agttaaagga gatgatctgc caaaagacta ttatatcaaa gaacttcttt
     9961 ttgagaattc tgttaatact gctcctcttg atgcaataga ggcatttaaa ggaaaaatgc
    10021 attttaaaaa acctttaatg aattttgaaa tttatacaga acttaatcaa atcatttctc
    10081 aaagtgaacg agaaaaagct tgcaatgatt tattaagtga tggcctagag caattttgta
    10141 ttgcttttga agatatttta aaagctcttt aattaacgta tttttatcat tttattcttt
    10201 gaaagtttta atatttttga tgggatattt tcgaaaaatt tctcatcaag tattatatcg
    10261 gcaacacttc tagcccattc ttcatcaaat tcttttccat gcttgtttgc cgaagatgaa
    10321 taaaaatagc catttttact taaaaaattc gcatgtttac actctttcac aatacgaatg
    10381 gcctgattat tgggataaat aaaagttgtt tttttagaac gacgtactaa atttttaaaa
    10441 gattttggaa ttcttgctaa actttttaac tcgcaaaatt tcgcagaagt gattaagcaa
    10501 ggctgatttt tatctctacc ttttaaagca ttaatctctt ctaaattttt acttaaaaat
    10561 cctaccgtag tatctgtttg agctaaataa atcaagattt aagccactct tgcaaactct
    10621 ttacatctag gcaagattta ctctgtatag ctttaatcga ttttgcacct gctaaagctg
    10681 atcgtaaatt tgtaaaataa ggtattttaa aacgaataat attttcacga atttttttcg
    10741 tatcgccttt aaaactgtga ctatcgcttg tattgataac taagtgaatt tctccatttt
    10801 tcaatttatc ttcaacattg gggcgtcctt ctgaaatttt atgtacaagt tcgcactcaa
    10861 aaccactttc taaaatttcc ttgcaagttc cccctgttgc cataagctta aagccaagct
    10921 ttacatattc tgcagcgatt tttttggtat attttttatc cttatctttt aaggagataa
    10981 ataccacgcc ttgctctgga agatgattaa acgatgcaat ttgacttttc gcataagaat
    11041 ttgcaaaatc cttgcttata cccataactt cacccgttga acgcatttca ggacctaatt
    11101 ctaaatcact tccactaagt tttgcaaatg gaaatactgc ttctttcacg ctcatatatt
    11161 ttggagtttt agggcgtaaa attttagtat caaaattaac cactttaaaa gtatcataaa
    11221 attttaaagc ttcttttaaa tttccttgcc acatcacacg cgttgccact tttgctaaag
    11281 gaatacccgt agctttacta acaaaaggta tggtacgact agctctagga tttacctcta
    11341 tcatataaag ctcattatta tgtaaagcaa attgtatatt taaaagtcct acaactccca
    11401 aatttaaagc aatatctgcg gttttttgtg caataaattc ttgcattttt tcatcgatat
    11461 tgcaaggcgg caaagaacaa gcactgtcac ccgaatgaat tcctgcttct tctatgtgct
    11521 ccataattcc tgcaacataa acatctttgc catcacaaat cgcatcaaca tcaatttctg
    11581 tagcattgtc taaaaactga tcgatcaaaa cagggctttt atcgcttaca tccacagctt
    11641 cttgcatata gagtctaagt tcagcctcat catttaccac gcgcatcgca cgcccaccta
    11701 aaacataact tggtcttaca agcacaggat accctatatc actagcctta agaaccgctt
    11761 cttctacgct tgttgcagta gaattttttg gctgattgat acctagcttt gtaataaatt
    11821 cggcaaattt ctttctatct tctgccatat caattactct tgcgctagta cctataatct
    11881 tagctccaaa agcacttaaa cgcttagcaa atttcaaagg agtttgtcca ccaaaatgca
    11941 caatcactcc atcaggtttt tcacgctcaa tcaccgctct taaatgttcg aaatcaatag
    12001 gctcgaaata caaaatatca cttgtatcat agtcagtcga aacggtttca ggattacaat
    12061 tatacataat agttttaata cccatatctt taagcgcaaa agaagcatgt acgcaagcat
    12121 agtcaaattc tataccttgt cctatacggt ttggcccccc acctataatc atcacttttt
    12181 tttctttttt atccttagca tcgtttttac tttgagtgag ttcgcttaca ttgatacttg
    12241 aataaagata aggagttaag gcttcaaatt cacccgcaca agtatccact tcactaaatt
    12301 ctgcgatgat tttttgcttc attcttacat aataaatatc attttggctt aattctaaat
    12361 tatctttcaa atttacaagc aaggctatca ttttatctga aaagcccata gtttttgctt
    12421 ttctcaaaag agccttattg tttaaaatat ccatatcaat ttgttcttca aaatctacaa
    12481 tttctttaat ctgtgttaaa aaccaaggat ctattttaca aagctcataa agttcttcta
    12541 cgctaaaacc ttccctaaaa gcttgagcaa cataaagtaa acgcttttca ttggcattgc
    12601 gaattttaaa aacaagatca tttctatctt caaattttac cctatcaaaa ccacttaaag
    12661 aacgctcaag cgaacaaagt gctttttgta tactttcttt aaaagtgcgt cctatagcca
    12721 ttacctcacc cacacttttc atagctgtac ctaaagttgt atttgctcct ggaaattttt
    12781 caaaggtaaa gcgaggaatt tttgttacaa tataatcaat cacaggctcg aaagatgcag
    12841 gagttcctgt aatatcattt ttaatctcat ctaagctaaa acctactgcc aaaagtgtcg
    12901 caacctttgc tataggataa cccgttgcct tagaagctaa agcacttgat cttgaaactc
    12961 ttggattcat ttctataact atcattcttc cattttttgg gttgatagca aattgcacat
    13021 tacttccgcc tgtatctaca ccaatttcac gcaaaatagc aaaagaagca ttacgcataa
    13081 cttgatattc tttatctgtc aaagttaatg ctggagctat tgtaatacta tctcctgtat
    13141 gaactcccat aggatcgata ttttctatgc tacaaactat gatacaatta tccgctctat
    13201 cgcgtataac ttccatttca tattctttcc aacctaacaa actttcttca atcaaaattt
    13261 catgaatagg tgataaagct aaagcagtat tggtaagttc tttaaattcg tccatattgt
    13321 aaaccacacc acttccagca ccccctaaag tataagaagc acggatcatc aaaggaaagt
    13381 cgatttcatc tacggctttt aaagcttcgt cataattata cgcatacatc gattttggca
    13441 aatccatgcc aatttttttc atacattctt taaaaacctg acgatcttcg ccttttttaa
    13501 tcgcctcagg atttgcgcct aaaaatttca catctcctaa aagtccgctt tcataaactt
    13561 ccatagcaac atttaacgct acttgtccac ccatagttgg caaaattgca tcaatttttt
    13621 cttttttaat aatacttaaa atactttctt ttgttatggg ttctatataa gtcgcatctg
    13681 caaattcggg atctgtcatg atggttgcag gatttgagtt gattaatact acacgatatc
    13741 ctaattcttt taaagtcttt gcggcttgag ttccagaata atcaaattca caagcttgtc
    13801 ctatcacaat aggaccactt cctataagta aaatgctttt aatatctgtt cgttttggca
    13861 taaattttcc taagagcata aatttgggct gattataaca aaaattagtt ttataaactt
    13921 tgaaattatc gatataattt taaaaaataa acactctgct tttaatctag gaaataatac
    13981 ataaagaaat ttaagatttt ttataaaatt ctcattcaat tataaacatt tatttgataa
    14041 tttaacaaaa tttttagcat taaacaaagt tataataatt agcaaaaata tagaaaattt
    14101 ttaaaaagtc taatccttga cttataaatt atcaactaca tataaataag caggaatact
    14161 aatcttaaca taaggcttta cttctacact ttgatacata tcttcatcat taactctatt
    14221 cacaataccg acaggtatat ctgaaaagaa aatattatca agtccacttg ttaaaatttc
    14281 atctccggta ttaatttttg cccattttgg aataaattta accacaatcc tgccatcttc
    14341 accctggatt aaacctggag ctttggattt tcctatataa acagaaaaaa cacactgatc
    14401 atcaccttgt aaaagagcca ttgctctacc atttttatta atagctatac ctgcagtata
    14461 tccttgatat atcaaaccac ggtttttacc aacgggaatt ttgctccaat ctaaccataa
    14521 ttttttataa tcattcaatt gaacataaga aataactcta gttaaagaaa cttgaggtaa
    14581 atattttgta gaattttgat cctctaaaat acgatttaat tgatttgcaa aactagttac
    14641 ctttacagca atatcttcta attctttatt tctagctttt agttgctgaa tttgatttgc
    14701 ttgattaaag tgttctgaaa ttttttctcc caaataatct ttaatattat aaaaattacc
    14761 tataacaaaa tcattaacac ggagaacatt ttgcttaata agtcctccat aataaaaaga
    14821 tataaaaacc aaaaaggcta agacaagaac ataaaaaatc ttattcttca ttggttaatt
    14881 gttgcaataa tgaaatttcc tctaaagctt tacctgttcc ttttgctaca gctaaaagcg
    14941 gttcatctgc gatataaact ggcaaacgta caatttcact taagtattta tcaagaccac
    15001 gaatcaatgc tccgccacct gttaaaacta caccattttc tactatatca cttgctaaat
    15061 caggcggcat catttcaaga accattttta aagcatcagc aatttctttt aaatactcac
    15121 gcatcgcttc tcttacatct tcgcttgtaa gttcaatacg acttaaaagt ccacttactt
    15181 gatcgcgtcc ttttaccacc atagaaagct cttttggaag ttgtattgct gaacctatag
    15241 tgattttgat ctcttcgcct gttctttcac ctatgataag attgtatttt tcttttacat
    15301 aattaactat actcatatca agcttatctc cagccgtacg aatagacttt gaaatcacaa
    15361 gtccacccaa agaaatcact ccaatctcag tagttccacc ccctatatct actaccaaat
    15421 ttcctttagg ctcttgtata ggtaaacttg caccaatagc tgctgccata ggctcttcaa
    15481 tcaaaaatac ctctcttgca cctgcgctta aagcactttc tcttaccgct tttctttcta
    15541 cttgagttaa accataagga acagaaatga taattctagg gcgtaaaaaa ctttttctac
    15601 ggtgtgtttt ttctataaaa tagcggatca ttttttcagt catatcaaaa tctgcaatca
    15661 cgccatcttt cataggacga atagcttcga tattgcctgg agtttttccc accatatctt
    15721 tagcttcttt acctacggct aaaatttttg ctttggaacc atacctttct ctttcaactg
    15781 ccacaacaga aggctcattt atcactatac ccttatcttt taccaaaact agcgtattag
    15841 ctgttcctaa atcaatcccc atatcactag aaaaaaatcc tataagttga tctaatatca
    15901 tttctatcct ttttaactta tttttctttt tattaataat gcctttgcat tgtctttaac
    15961 aacttctttg gttattacaa tatcatagtc tttatactct ggtaactcaa acattaaatc
    16021 taccatcatt tcttctataa tacttctaag ccccctagcc cctgtttttc tctccaatgc
    16081 aagttgtgcg atagctctta gagcatcttc ttcaaatttt aaatttaccc catcaatagc
    16141 aaaaagcttt tgatattgct taataatggc atttttaggt tcagttaaaa ttcttaccat
    16201 atcttcttca ttaagctcat ttaaagatgc aatcacatgc aaacgaccta taagctcagg
    16261 aatcaaacca aaatgaacca aatcatcagg ttcaattttc tcaagtaaag ctttattttc
    16321 ttcttttgca tcatcaaaaa aacctacaac tttatctcca agttttcttt ttaagatagt
    16381 ttccaaacca tcaaaagctc caccacaaac aaataaaata tttgaagtgt caatttgtat
    16441 aaactcttga tttggatgtt ttctcccccc ccttggtgga atatttacca aacttccttc
    16501 gataatctta agtaaagctt gttgcacacc ctctccactt acatcacgag taatagaacg
    16561 attttcactc attctggcaa ttttatcaat ctcatcaata aaaactatac ctttttgagc
    16621 tctttgcaca tctccatctg cagcttgtaa aagacgtgtt aaaatatttt ccacatcctc
    16681 acctacatat cctgcttcag ttaaagaagt tgcatcacaa attgctatag gtacatctaa
    16741 aaatttagct aaagtttgcg ccaataaagt ttttccactt cctgttggcc caacaagtaa
    16801 aatatttgac ttaaaaagct ctgtatcatc atcttgaagt tcagctttaa aaagtctttt
    16861 ataatgattg tatactccaa cactaaaaac ttttttagct ctatcttgtc ctatgacata
    16921 acgatctaaa taagctttta attcttttgg agtgatatct ttaaattctg tattatgact
    16981 ttgtttaggt tctttaaatt ctttttcttc tccataaata atactataag caccttcaac
    17041 gcaatattca caaataaaag catcatcatt ttcatttgct aaaattcttc tttgtggatt
    17101 ctccacttca ttgcaaaaac tacattttct aggcattatt tttaccccta tagacaggaa
    17161 ttccacgctt tgtttctaat ataaaatgac acattttttt aacattttca ctttcttgat
    17221 tttcaagcaa atttttagca ttttctttta agtctccttg tctaaataaa gttttaaaag
    17281 ctctgctaag tctatctact tcatctttat caaaacgacg acgaatacct actaaattta
    17341 aacttctaat acttgcacga tttccttctg ctaaacaaaa cggtactata tcctgagaaa
    17401 gtgcacttgc tcctgctatc atacaaccct cacctacttt gacaaattga tgaataggtg
    17461 taagcccgcc tacaactgta aaatctccaa gctctacatg tcctgctaaa gttgcattat
    17521 tagctaaaat aatattatta cctaaaagac aatcatgagc aatatgacaa taagccataa
    17581 taaaagcatt atcgcctata cgagtaaaac catctccttt agctgtacct gaatttatcg
    17641 ttgcaaattc tctaatagtt gcattttttc ctataacaac accgcttttt tgctcttctt
    17701 tataagatat gtcctgagga atatcgccta ctatagcata agaaaataca cgagaatgat
    17761 cacctatagt tgtatctgaa agaattcgag caccttgttt gatgacaaca ttattaccta
    17821 ttttagcatc tttgcttaca taggcataag cttctattac aacatcgtca ccaagttgtg
    17881 caccctcttc aatcaccgca cttggatgaa tttttttcat tatttatcca ctatcatagc
    17941 tttaagctcg gcctctgcaa ctaaatttcc atctacaaaa gcttgccctt taaaaatcca
    18001 catattacca cgatttttaa ccacgctcat ttcataatca agcctatctc caggacgcac
    18061 aggatttcta aattttgctc catctatgcc tgtgaaataa actactttac tttttggatc
    18121 cactttatct tccatacttt caaaagctaa aactccacct gtttgagcca taccttctaa
    18181 aatcaaaact ccaggataaa taggatgccc tggaaaatgt cccataaaaa catggtcact
    18241 tatactgatg tttttatatc ctagcaccac ttctttaact tttaattctg taattttatc
    18301 tactagtaaa aaaggataac ggtgtggtaa gatttcttga atttgca
//
LOCUS       DAPIVO010000038        18231 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.038, whole genome shotgun sequence.
ACCESSION   DAPIVO010000038 DAPIVO010000000
VERSION     DAPIVO010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18231)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18231)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18231
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.038"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            14..979
                     /locus_tag="RJ239_001129"
     CDS             14..979
                     /locus_tag="RJ239_001129"
                     /inference="COORDINATES: protein motif:HMM:NF019310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7331254.1"
                     /translation="MEKSLLFHFRRIGVEFIIFSVYAVFSISWAATGSLMPLISNDLA
                     LNTQQATLITSMIVVAKIFGASFTAFLVYKFGLKKGYFLGCILMSSGIFLSFVDSYSG
                     ILIIRFLTGLGSACALVCLVPIAQQWFEKKALHFVISFNITSNLVGITLGLVLAESIS
                     NYFGNWRDSLSFYAWINLILLILWLFVGKDENKKEEKKNNAKDLIYALKSRVTWGMII
                     FYIGPILFLNSLFTFLPTFYAQYAGFSKELADFAKKEIPALANFAIIFGPYLGLFFKR
                     KNISFKIMLLSGGACIFICGFCMLFLQNLVLIQIFAVLSGIFYSM"
     gene            1046..1234
                     /locus_tag="RJ239_001130"
     CDS             1046..1234
                     /locus_tag="RJ239_001130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331255.1"
                     /translation="MSAFWSITFVILSFNLWVVSWSVDKTHSFTLGFVYIFALIFISA
                     ILAQFVLPRREKFIQGEK"
     gene            1236..2387
                     /locus_tag="RJ239_001131"
     CDS             1236..2387
                     /locus_tag="RJ239_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDV7331256.1"
                     /translation="MNLIPEILDLQGEFEKIRHQIHENPELGFDELCTAKLVAQKLKE
                     FGYEVYEEIGKTGVVGVLKKGNSDKKIGLRADMDALPLQECTNLPYKSKKENVMHACG
                     HDGHTTSLLLAAKYLASQNFNGALNLYFQPAEEGLGGAKAMIEDGLFEKFDSDYVFGW
                     HNMPFGSDKKFYLKKGAMMASSDSYSIEVIGRGGHGSAPEKAKDPIYAASLLIVALQS
                     IVSRNVDPQNSAVVSIGAFNAGHAFNIIPDIATIKMSVRALDNETRKLTEEKIYKICK
                     GIAQANDIEIKINKNVVAPVTMNNDEAVDFASEVAKELFGEKNCEFNHRPLMASEDFG
                     FFCEMKKCAYAFLENENDIYLHNSSYVFNDKLLARAASYYAKLALKYLK"
     gene            complement(2391..3131)
                     /locus_tag="RJ239_001132"
     CDS             complement(2391..3131)
                     /locus_tag="RJ239_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaaA family protein"
                     /protein_id="HDV7331257.1"
                     /translation="MKILFSPSESKNENCVKNPINENSFIFKELFPYRMEALKHYEEF
                     IKNASLQNLQELFGIKNENEIDKFKHDLKQAPTQEAILLYTGVSYEYLNFKALDKKSQ
                     AYILENTLIFSNLFGIVRANDTLPFYKFKQGAKIGNFAIEKFYKEHFSKALDEYLENE
                     EILDLRAGFYDKFYTPKKKFYTYKFVKNGKVISHFAKAYRGILLSISAKNQVKNNKEL
                     LANLPSNLKLKEIQIKGLKEEIVLEILD"
     gene            complement(3223..4341)
                     /locus_tag="RJ239_001133"
     CDS             complement(3223..4341)
                     /locus_tag="RJ239_001133"
                     /inference="COORDINATES: protein motif:HMM:NF027978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="JlpA-like lipoprotein"
                     /protein_id="HDV7331258.1"
                     /translation="MKKGIFLSIGIAVLFSACGNSIDEKTVKKYENQLNQTVKQEIAS
                     LSQDSGIKIEFSDFKCNADGDFIACLSPNFKTLTKDNNDEYQELFQAKNIKIRSNEIY
                     KGEANASISIKEYYNDLFKNQKSIQSNLVFEDFKLGEKVVSDINASLFQQDPKISSFI
                     NKLSSDSYTLSFDNSINKQENNYLDNLDIKFYNAKLNFNTNLNINLKEDLLNYLDSKG
                     IKFNTQTLVMDKQAINELLNIANYEQASDFSNTIQKYIILNNFKIDSTLKTEGVFSSY
                     IATAKENLQTLKAQSQNEEQALIFDKALAILNNITQNDDYKLNLDLKFKNIPVSDYST
                     QGIDSIEKLSINNQDATEALKIILPFIMFSMLMGGASF"
     gene            4560..5399
                     /locus_tag="RJ239_001134"
     CDS             4560..5399
                     /locus_tag="RJ239_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV7331259.1"
                     /translation="MKKILLSVLTAFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIG
                     VFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKV
                     DIILANFTQTPQRAEQVDFCSPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTAD
                     AYFTQNYPNIKTLKYDQNTETFAALMDKRGDALSHDNTLLFAWVKDHPDFKMGIKELG
                     NKDVIAPAVKKGDKELKEFIDNLIIKLGQEQFFHKAYDETLKAHFGDDVKADDVVIEG
                     GKI"
     gene            5439..6686
                     /locus_tag="RJ239_001135"
     CDS             5439..6686
                     /locus_tag="RJ239_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7331260.1"
                     /translation="MQKKYKNIIYASLGGILEFYDFVLFAFFLDIFAKVFFPQNDAFW
                     MQINAYIAFGAAYLARPFGSIVMAHFADRYGRKNIFYISMLLMVLPSFALAFLPSYES
                     IGIFATLILFTIRILQGLAVGTEVSGAWIYVSEFVKGRQIPLALGFISATLTIGLLLG
                     NIATLGIRSYFTPEEVQSYAWRIPFIIGGFFGILALFLRNKLSETPEFIKVQNEKKIL
                     SFPLFEALKTHKMSMLVCFLMTMVLTSGVATLMILPKYFESLLAMSKTSALWVQNFAI
                     LAVIFGALFQGFLASKWGSYKICSIFSIAFIIFGMLFGFYDENFLFYFLLACFAQGII
                     TFAPVFMTQIFKSELKFSGLSFAYNISYAILGFLTPFIVNAFYKEYLGIYLAIVGSCS
                     LLCVFLLKRVFARSKIKELSIVF"
     gene            complement(6669..7937)
                     /locus_tag="RJ239_001136"
     CDS             complement(6669..7937)
                     /locus_tag="RJ239_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HDV7331261.1"
                     /translation="MQNVIENFKQLCKIPHCSYETEQMKEFLSSYAKDKGFKVSVDKA
                     GNIHAIKGKPKICLQSHYDMVCMGDAPNLEVYEENGFLRAKNSSLGADNGIGIAIMMS
                     AMAEFENLECLFTNDEEVGLMGVNLLEHTLESKMLLNLDHESDDEIMIGCAGGVDIEA
                     SLSFNTLRKKGKIYELCAQNFKGGHSGINIIRNEKSSIKEMAKFIQENEGEIISFEGG
                     ERINSIPKHAKALVHFKDEVKSNNWIKCEFKEENEFEICDQSKKLLSLINSFTHGVRA
                     YDENLDIVQTSINLATLRMQDNQIKFALFARSNILDGLKQVEFETLEFFKAFDFKIRS
                     FNFYPPWEGKPNALSDMVFKALKKVSPNAKVSAIHAGLECGIIEKKQELLCASIGPNI
                     HNPHSTDEHCEIASVEKISKVVFEVLKDNA"
     gene            8005..8532
                     /locus_tag="RJ239_001137"
     CDS             8005..8532
                     /locus_tag="RJ239_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HDV7331262.1"
                     /translation="MRINYKKIFNLRKLLSDPKKLFSVLIFTLVVVFIQNYIAQNSSF
                     EGKVVRIIDGDTIEVNHENKLARIRFFGIDAPELKQSFGKQSKEALSRILSGKQVEII
                     YKNKDTYGRIVAIVKLNDVDINRFLVSKGYAWADTYYSNAYTKEQENAKKNHLGLWKE
                     SNPIEPYKWRKHNKF"
     gene            8541..8714
                     /locus_tag="RJ239_001138"
     CDS             8541..8714
                     /locus_tag="RJ239_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7331263.1"
                     /translation="MKKYTLMVLLVLGISGCFVNERGISNRFYDDCKEYYDGSGTYHK
                     DCPKNWVDIKMTP"
     gene            complement(8715..9293)
                     /locus_tag="RJ239_001139"
     CDS             complement(8715..9293)
                     /locus_tag="RJ239_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331264.1"
                     /translation="MAKKDNFEEYAQLEEYASAEDISRVRAELLTCPELNTSLAGTII
                     EIDKNYAKSILITTSEMVADDQGLIFDAFIFAAANYVAQASINKEFSVIIGSKCFFYA
                     PLKLGDVLELEAHALFDETSKKRDVKVVGHVKEVKMFEGTIQVVSTDEHIFKLKRPPL
                     NTVKPTENQEQGAKINNPEAVAAALMASVGGK"
     gene            complement(9366..10256)
                     /gene="cmoB"
                     /locus_tag="RJ239_001140"
     CDS             complement(9366..10256)
                     /gene="cmoB"
                     /locus_tag="RJ239_001140"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HDV7331265.1"
                     /translation="MSRIKMQENLLEKQFLNHPLYAKIQELKALNLACNFSLGDSVNL
                     STNSQAKDEILAIAKELKPWRKGPFKIDDLFIDTEWQSFIKFNILKPFMNEISQKCVA
                     DIGCNNGYYMFKMLEFNPAKLIGFDPSIKYRLQFELINALAKTPIKYELLGVEDLPSY
                     SLKFDVIFCLGVIYHRSDPIKMLKDLKAGLNKNGVVFLDTMYIEDEREIALVPNKTYS
                     KIPNIYFVPSISALKNWCERAGFKEFEVLATKKTDENEQRKTEWIDSFSLENFLDPKD
                     KNLTIEGYEAPKRVYIRIKI"
     gene            complement(10352..12076)
                     /locus_tag="RJ239_001141"
     CDS             complement(10352..12076)
                     /locus_tag="RJ239_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HDV7331266.1"
                     /translation="MLEQSPYKEDANSKNYNNTLKVKDGVIIIDHSNTSDDNNSKTIN
                     TKKNTQKNQPNLSNDNTLKTKTPNSNTPSLKNTSKEESIYKVSFSFHITNKNINFKDL
                     GLDEQVLQEALNDYKKESISVQDLQDIANIISYYVQVSGYPAATAYIPQQELKDQIQI
                     NITLGVLGKYVVQNNSSVRDYAIESKLPNHKGEIITTKLVEDAVYKVNEMYGIQTLAS
                     LKAGDNPGKTDVVIETTPSDSFVSVLFYGDNYGIKESGRYRDGASMSFNNIAHQGDSL
                     NAYLQRSDEAQTNYSISYTTFLGNLKITPSYSKRNYALGGAYKNANFIGTSENLGIDL
                     KYPLWITTYNSFYLTSSYYHKKLSNSRLNIMTIDKSSDTISFSIEGVYNGISNDSFSY
                     SANVSYGNVKDGGTTILGMSSKTDGDGFGKFAKLNVNLNNAYFFNDTFTHLFSLNYQQ
                     VVNGATLDSSETISLGDPYGVRAYNNGDGEGDNAVVASFGLRMATPLKDFYITPFYDI
                     GYSWYENDSKLYRASETNYMDAYGLQLLYNKTGNFYVKLDLARALKKYKLDDDYSSKA
                     YVSFGKYF"
     gene            complement(12134..12274)
                     /locus_tag="RJ239_001142"
     CDS             complement(12134..12274)
                     /locus_tag="RJ239_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331267.1"
                     /translation="MLKMIKIQKVKSLLDLVKKLKNKQSLKIKNQTNTKENLNKTHYL
                     TI"
     gene            complement(12262..13901)
                     /locus_tag="RJ239_001143"
                     /pseudo
     CDS             complement(12262..13901)
                     /locus_tag="RJ239_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865998.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
     gene            complement(14270..16261)
                     /locus_tag="RJ239_001144"
     CDS             complement(14270..16261)
                     /locus_tag="RJ239_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002853402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331268.1"
                     /translation="MREDEVLSFKARHGVNTAGHSIKTVRVLPFLITAKTDHADASYN
                     KLILEQGELSSVFYLKPKDTHIKNPSNSKSNQRMNFLMSSTFTHYGNASYNQTILQKD
                     AHISMGVENTYDLALNGAPYLIGAIATYGDSTNNSLNIEAGSSVEFFTSLPKKDKNGN
                     NTFDERITHLVGGLAYQGNVKNNKIFIKDANMIIHGPSKAYASLAAAHISAGYIDSGT
                     DKNFQASKNLLDIDGFNLDMYMNHDKQPLAYNSVLFADFWGGKTEQGQALDNTINLKD
                     IKNLKKDKNNENIFAQALFNFYAGASNNGEANYNTLNIELKHPLEIANNFLGYNQHSF
                     YGGFATKGANHNTINIKNDLTTTDLSQSYKDALNIVAARTLEGSADYNKVYINNSMST
                     LPVYIYTAKKNILNNQDFYPSSANNNEVVIKDFASFRNLTVLTEAKEASYNTINYNNV
                     QSITDVSNIDKGSKIIIRALDKANHNTIDIKNYSSNAADNAYLIMAYNEAAYNKIIIN
                     DTLFGVASDKREGILSIIAGLSNNAHDNTLIINNLNLDEYKNNNSIFIAPSAITGLSE
                     AKSYNNTLYIGGNLNIFKNTFIDILAGALVHYEDNYSASNAAAPSDISLSKNNRLILN
                     TKVEARIINNFEHYYLIVSNKINTTPLLKSYDAPINISS"
     gene            16700..17074
                     /locus_tag="RJ239_001145"
     CDS             16700..17074
                     /locus_tag="RJ239_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDV7331269.1"
                     /translation="MKMRVYYEDTDAGGVVYHSNYLKFCERARSEIFFNKKVDIFDAS
                     KGHFLLAKANCNFLKPAKLGDMIEIKTKILEVKNASVEILQEIYKDEILLFKMELTLA
                     FIKNEKPARMDMQLKKLFEELF"
     gene            complement(17066..18217)
                     /locus_tag="RJ239_001146"
     CDS             complement(17066..18217)
                     /locus_tag="RJ239_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331270.1"
                     /translation="MLNAKEQKLVDVKPVENFYPKLSVQECNTNCLFDLLESRLYLSF
                     LSEFADQNDQFLSNVYAKLLNSITDFEKNVQKITSVKLAIIIPEKTIKSYSNTIINSS
                     IAYLLRQRAEIKVKVFLTGTEDNDKIRAALDAAQAQGYQYAIAGFTLKGANELKNYSG
                     NMKIFIPTIHKNNIQISNQNIIFGSIDYDAQIATLLSKSNANIAIFSDGSALSSNLNS
                     RILAQNNNARIYTIEGEKLDFSRLLRSQGGVNNASIFFNTPLIKTALASSQLRIYNIH
                     PYVLLSTQINYNPTFLSLTQQGDRENFIIANSINNHDDNLVYLNEIFNQSIDYNWIAY
                     ATSIGVDYFYTEFLNKKSESLFDEKIKNSQVDYKVRLMQGKQASFEELK"
BASE COUNT         5787 a         2534 c         2885 g         7025 t
ORIGIN      
        1 aaaggatttt aatatggaaa aatcactttt atttcatttt agacgcattg gagttgaatt
       61 tatcattttt agtgtttatg ctgtttttag tatctcttgg gcagcaacag ggtctttaat
      121 gcctttgatt tcaaacgatc ttgccctaaa tactcagcaa gctactttaa tcactagcat
      181 gatagtggtt gcgaaaattt ttggtgcttc atttactgct tttttggttt ataaattcgg
      241 attaaaaaag ggatattttt taggctgtat tttaatgagt tcgggtatat ttttaagttt
      301 tgtagatagt tatagtggta ttttgattat aagattttta acagggcttg gttcagcttg
      361 tgctttagtt tgcttagtgc ctattgcaca gcaatggttc gaaaaaaaag ctttacattt
      421 tgtaattagt tttaacataa cttcaaattt agtaggcatt accctaggac ttgttttagc
      481 tgaaagcatc tcaaattatt ttggaaattg gagagattct ttatcatttt atgcttggat
      541 taatttgatt ttattgattt tgtggctttt tgtaggtaaa gatgagaata aaaaagaaga
      601 aaaaaagaat aatgcaaaag atcttattta tgctctaaaa tctcgtgtta cttggggtat
      661 gattattttt tacatagggc ctattttatt tttaaattct ctttttactt ttttaccaac
      721 tttttatgca caatatgcag gttttagtaa agaattagct gattttgcta aaaaagaaat
      781 tccagccttg gctaattttg ctattatttt tggtccttat cttggattat tttttaaaag
      841 aaaaaatatt tcttttaaaa taatgctatt gtctggagga gcgtgtattt ttatatgcgg
      901 attttgtatg ttatttttac aaaatttagt attgatacag atttttgctg tgttatcagg
      961 cattttttat tctatgtagt ttccattttt ctttaattta ccttcagaac taaaaaattc
     1021 caatccaaat caaactgctt atattatgag tgctttttgg agtattacct ttgttatact
     1081 atcatttaat ctatgggtag tatcttggag tgttgataaa acccatagtt ttactttggg
     1141 ttttgtttat atttttgctt tgatttttat ttcagcgatc ttagcacaat ttgttttacc
     1201 tagaagagaa aaatttatac aaggagaaaa atagaatgaa tttaattcca gaaatactag
     1261 acttacaagg cgaatttgaa aaaattcgtc atcaaattca tgaaaatcct gagcttggtt
     1321 ttgatgaatt atgtactgca aaattagtgg cgcaaaaatt aaaagaattt ggttatgagg
     1381 tttatgagga aataggaaaa acaggcgttg tgggggtttt aaaaaaggga aatagcgata
     1441 aaaaaatagg acttcgtgca gatatggatg ctttgccttt acaagaatgc acaaatttgc
     1501 cttataaaag caaaaaagaa aatgtaatgc atgcttgtgg tcatgatgga catactactt
     1561 ctttattgct tgctgcaaaa tatttagcaa gtcagaattt taatggcgct ctaaatcttt
     1621 attttcaacc tgctgaagag ggtttgggtg gtgctaaggc aatgatagaa gatggattgt
     1681 ttgaaaaatt tgatagtgat tatgtttttg gatggcacaa tatgcctttt ggtagcgata
     1741 agaaatttta tcttaaaaaa ggtgcgatga tggcttcttc ggatagttat agtattgaag
     1801 ttattggaag gggtggtcat ggaagtgctc cagaaaaggc aaaagatcct atttatgctg
     1861 cttctttgct tattgtggct ttacaaagca tagtatctcg caatgttgat cctcaaaatt
     1921 cagcagttgt aagcatagga gcttttaatg caggacatgc ttttaatatc attccagata
     1981 ttgcaacgat taaaatgagt gttagagcat tagataatga aactagaaag ctaactgaag
     2041 aaaaaattta taaaatttgt aaaggtattg cgcaggctaa tgatatagag attaaaatca
     2101 ataaaaatgt tgttgcacca gtgactatga ataacgatga agctgtggat tttgctagtg
     2161 aggttgcaaa agaattattt ggcgaaaaaa attgtgaatt taatcatcgt cctttaatgg
     2221 caagtgagga ttttggattt ttttgcgaaa tgaaaaaatg tgcctatgct tttttagaaa
     2281 atgaaaacga catttattta cataattcta gttatgtttt taatgataag cttttagcta
     2341 gggctgcaag ttattatgcg aagctagctt taaaatactt aaaataaaaa ctaatctaga
     2401 atttcaagca caatttcttc ctttaaacct ttgatttgaa tttctttgag ttttaggttt
     2461 gaaggaaggt ttgctaaaag ctctttattg ttttttactt ggttttttgc acttatggag
     2521 agtaaaattc ccctataagc tttagcaaaa tgactgatga ctttaccatt ttttacaaat
     2581 ttataagtat aaaatttctt ttttggggtg tagaatttat cataaaatcc tgctctaagg
     2641 tcaagtattt cttcattttc taagtattca tctaaggctt tactaaaatg ttctttataa
     2701 aatttctcta tggcaaaatt tcctatttta gccccttgct tgaatttata aaagggtagg
     2761 gtatcattag ctcttacaat gccaaaaaga ttagaaaata taagagtatt ttctaaaata
     2821 taagcttgac tttttttatc taaagcttta aaattaagat attcataact taccccagta
     2881 taaagcaata tagcttcttg ggtgggagct tgttttaagt cgtgtttaaa tttatcaatt
     2941 tcattttcat ttttaatgcc aaaaagttct tgtaaattct gtaaacttgc gtttttgata
     3001 aattcttcat aatgctttaa agcttccatt ctataaggaa ataattcttt aaatataaat
     3061 gagttttcat tgataggatt ttttacgcaa ttttcatttt tactttcgct aggggagaat
     3121 aaaattttca ttttagcctt ttttgttaat attatgaaaa cattaagagc aaagaattta
     3181 atcttgcttt taatgttttt gaagttttta tcattttaaa atttaaaatg acgctccgcc
     3241 cattaacata gaaaacatga taaatggaag tataattttt aacgcttctg tggcgtcttg
     3301 attgttgatg cttagttttt ctatgctgtc gattccctgt gtgctatagt cactaacagg
     3361 gatgttttta aattttaaat caagattgag tttataatca tcattttgag tgatattgtt
     3421 taaaatagct aaagctttat caaagattaa tgcttgttct tcattttgac tttgagcttt
     3481 taaggtttgt aaattttcct tagcagttgc tatatagcta ctaaatacgc cttcggtttt
     3541 aagagttgaa tcaattttaa aattatttaa gatgatgtat ttttggattg tattgctaaa
     3601 atctgaagct tgttcgtagt ttgctatatt aagaagttca ttgatagctt gtttatccat
     3661 aactaaagtt tgagtgttaa attttatacc cttagaatca aggtaattaa gcaaatcttc
     3721 ttttagattt atatttagat ttgtattgaa atttaatttt gcgttataaa attttatatc
     3781 aagattatct agataattgt tttcttgttt gtttatggag ttatcaaatg ataaagtata
     3841 agaatccgag cttaatttat tgataaaaga gctgattttt ggatcttgtt gaaataagct
     3901 tgcattgatg tcactaacaa ctttttctcc aagtttaaaa tcttcaaaaa ccaaatttga
     3961 ttgtatgctt ttttggtttt taaaaagatc gttgtaatat tctttaatgc taattgatgc
     4021 atttgcttcg cctttgtaaa tttcatttga gcgaattttg atattttttg cttgaaatag
     4081 ttcttgatac tcatcgttat tatcttttgt aagagtttta aaatttggac ttaaacacgc
     4141 tataaaatca ccatctgcat tgcatttaaa atcagaaaat tcaatcttta ttccagaatc
     4201 ctgagaaagg cttgcaattt cttgtttaac tgtttgattt agttgatttt catatttttt
     4261 aactgttttt tcatctatgg aatttccgca agctgaaaac aaaacagcta ttccaataga
     4321 gagaaaaata ccttttttca tagttttctc cttaaaaatt taaaaaaaga ttatatcttt
     4381 ttttacttaa aatttaaaca atgctaaaag agagtgtgag attaattaca tttttacaca
     4441 taggaaaatc tttttagttt gtttcaaatg cattatttat aattttaagt ataattaact
     4501 ttgcaattat tatatatttt tgcaatagct ttaagcttat ttttaaagaa aggaaatgta
     4561 tgaaaaaaat acttctaagt gttttaacgg cctttgttgc agtagtattg gctgcttgtg
     4621 gaggaaattc tgactctaaa actttaaatt ctcttgataa gatcaagcaa aatggagttg
     4681 ttaggattgg ggtatttggc gataaaccac cttttggtta tgtggatgaa aaaggaaaca
     4741 atcaaggcta tgatatagct ttagctaaac gcatagcaaa agaacttttt ggcgatgaaa
     4801 ataaggtgca atttgttctt gttgaagctg caaatagggt tgagttttta aaatcaaata
     4861 aagtagatat tattttggct aattttactc aaactccgca aagggcagag caggttgatt
     4921 tttgctcgcc ttatatgaag gtagctttag gcgtagctgt accaaaggat agtaatataa
     4981 ctagcgtaga agatttaaaa gataaaacct tgcttttaaa caaaggcaca acagcagatg
     5041 cttattttac gcaaaattat cctaatatta aaactttaaa atatgatcaa aataccgaaa
     5101 cctttgccgc tttgatggat aaaagaggcg atgctttaag tcatgataat accttacttt
     5161 ttgcttgggt gaaagatcat cctgatttta aaatgggtat taaagagtta ggtaacaaag
     5221 atgttatcgc accagcggtt aaaaaaggcg ataaagaact taaagaattt atcgataatt
     5281 tgatcatcaa actaggccaa gagcagtttt ttcacaaggc ttatgatgaa actttaaaag
     5341 ctcattttgg agatgatgtt aaggccgatg atgtagtgat tgaaggtgga aaaatttaat
     5401 aaagggcttt ttgcccttta gttgatttag gataaaatat gcaaaaaaaa tacaaaaata
     5461 ttatttatgc ttctttgggt ggaattttag aattttatga ttttgtgctt tttgcctttt
     5521 ttttggatat ttttgctaag gtattctttc cgcaaaatga tgctttttgg atgcagataa
     5581 atgcttatat agcctttggt gctgcttatt tagcgcgtcc ttttggttct attgtgatgg
     5641 cacattttgc tgatagatat ggaagaaaga atatttttta tatttctatg cttttgatgg
     5701 ttttgcctag ttttgcttta gcttttttac caagttatga aagtataggt atatttgcta
     5761 ctttgatttt atttactatt cgtattttgc aaggtttagc cgttggaact gaggtgagcg
     5821 gagcttggat ttatgtgagc gaatttgtta aagggcgtca aattcctttg gctcttggtt
     5881 ttatttcagc gactttaacc ataggtttat tgctaggaaa tattgccact ttgggcataa
     5941 gatcttattt taccccagaa gaagttcaaa gctatgcttg gagaattcct tttatcatag
     6001 gaggattttt tggaatttta gctttgtttt taagaaataa actcagcgaa actccagaat
     6061 ttataaaagt tcaaaatgaa aagaaaattt taagttttcc attgtttgaa gctttgaaaa
     6121 ctcataaaat gagtatgctt gtttgttttt taatgaccat ggttttaaca agcggtgtgg
     6181 caactttgat gattttgcct aagtattttg aaagtctttt agctatgagt aaaacttctg
     6241 ctttatgggt gcaaaatttt gctattttag cggtgatttt tggagcttta tttcaaggtt
     6301 ttttagcaag caaatgggga agctataaaa tttgctctat ttttagtata gcttttatta
     6361 tctttggtat gctttttggt ttttatgatg agaatttttt attttatttt ttactggctt
     6421 gttttgcaca aggtattatt actttcgcgc ctgtttttat gacgcaaatt tttaaaagcg
     6481 aacttaaatt tagcgggctt agttttgctt ataatatttc ttatgcgatt ttaggttttt
     6541 taaccccttt tatagttaat gctttttata aagagtattt aggtatttat cttgctatag
     6601 tgggatcttg ctccttgctt tgcgtgtttt tgttaaaacg cgtttttgca agaagtaaga
     6661 ttaaagaatt aagcattgtc ttttaaaact tcaaaaacaa ccttagatat tttttcaact
     6721 gaagcgattt cacaatgctc atcagttgaa tgaggattat ggatatttgg gcctatagaa
     6781 gcgcataaaa gctcttgttt tttctctata atgccacact caagccctgc atggatagct
     6841 gaaactttgg cattaggcga tactttttta agtgctttaa aaaccatgtc gctaagtgcg
     6901 tttggtttac cttcccaagg tggatagaaa ttaaaacttc ttattttaaa atcaaaagct
     6961 ttgaaaaatt ctaaagtttc aaattctact tgcttaagtc catcaagtat attagatctt
     7021 gcaaaaagtg cgaatttgat ttggttatct tgcattctta aagtagctag gttaatgctt
     7081 gtttgaacta tatctagatt ttcatcataa gctctaactc catgagtgaa agaatttata
     7141 aggcttaaaa gttttttact ttgatcgcaa atttcaaatt cattttcttc tttaaattcg
     7201 cattttatcc agttattact ctttacttca tctttaaaat gcactaaagc tttggcgtgt
     7261 ttaggtatag aattgattct ttctccgcct tcaaaagaaa tgatttctcc ttcattttct
     7321 tgtatgaatt tagccatttc tttgatggaa cttttttcat tgcgtatgat atttatgcct
     7381 gagtgtccac ctttaaaatt ttgcgcacaa agctcgtaaa ttttaccctt ttttctaagg
     7441 gtattaaaag acaaacttgc ttctatatct actccacctg cacagcctat catgatctca
     7501 tcatcgcttt catgatctaa atttaaaagc attttagatt ctaaagtgtg ctcgagtaaa
     7561 ttcactccca tgagtcctac ttcttcatcg tttgtaaaaa gacattctaa attttcaaat
     7621 tcagccatag cactcatcat gatggctata cctatgccat tatctgcacc aagacttgaa
     7681 tttttggctc ttaaaaagcc attttcttca taaacttcta agtttggtgc atcgcccata
     7741 cagaccatat cataatggct ttgtagacaa atttttggtt tgccttttat ggcatggata
     7801 tttcctgcct tatctacact caccttaaag cctttatctt tggcgtaaga gcttaaaaat
     7861 tctttcattt gttctgtttc ataactgcaa tgaggaattt tgcataattg tttaaaattt
     7921 tctataacat tttgcatttt atctcctttg ttttgataaa attatggcat attttttaaa
     7981 atttaaaggc aaaatgatta aaaaatgaga ataaattata aaaaaatatt taatctgaga
     8041 aaattactaa gtgatccaaa aaaacttttt tctgtattaa tcttcactct tgtagttgtt
     8101 tttatccaga actatattgc ccaaaattct agttttgaag gaaaagtagt tagaattatt
     8161 gatggagata ctatagaagt taatcatgaa aacaaactcg ctagaataag atttttcggt
     8221 atagatgcac cagaacttaa acaaagtttt ggaaagcagt caaaagaagc tttaagtaga
     8281 attttaagtg gcaaacaagt tgaaattatt tataaaaata aagatactta tggtagaatt
     8341 gttgctattg taaagcttaa tgatgttgat attaatcgat ttttggtaag caaaggctat
     8401 gcttgggctg atacttacta tagtaacgct tataccaaag aacaagaaaa tgctaagaaa
     8461 aatcatttag gtctttggaa agagagtaat cctatagagc cttataaatg gagaaaacac
     8521 aataaattct aaggaaaaac atgaaaaaat atactttaat ggtgctatta gttttaggaa
     8581 tttctggatg ttttgtaaat gaaagaggga tttcaaatcg tttttatgat gattgtaaag
     8641 agtattatga tggaagcgga acttatcata aggattgccc aaaaaattgg gtagatatta
     8701 aaatgactcc ttgattattt tccacccaca gaggccatta atgcagctgc tacggcttct
     8761 ggattgttga ttttggcacc ttgttcttga ttttctgtag gtttaacagt gttaagtggc
     8821 ggacgcttga gtttaaatat atgctcatcg gtgctaacaa cttgtatcgt tccttcaaac
     8881 attttaactt ctttaacatg tccaaccact tttacatctc tttttttgga ggtttcgtca
     8941 aaaagtgcat gagcttcaag ttctaaaaca tcgcctaatt taagcggagc ataaaaaaaa
     9001 cattttgatc caataatcac tgaaaattct ttattgatag aggcttgtgc tacatagttt
     9061 gctgcagcga aaataaaggc atcaaaaatc aatccttgat catctgctac catttcgctt
     9121 gtggttatta aaattgattt ggcatagttt ttatcaattt cgataatggt tccagcaagt
     9181 gaggtgttta attcaggaca agtgagtaat tctgctctaa cgcgagatat atcttctgca
     9241 gatgcgtatt cttcaagttg tgcatattct tcaaaattat ctttttttgc catatctaac
     9301 ctttaaattc tacttatcta cttcaaaata tctaaaattc aatatcggca aaaaataaaa
     9361 agaatttata ttttaatgcg tatataaact cttttgggtg cttcatagcc ttcaatggta
     9421 agatttttat cctttggatc taagaaattt tccagcgaaa aagagtctat ccattctgtt
     9481 tttctttgtt cattttcatc ggtttttttt gtagccaaaa cttcaaattc tttaaatcct
     9541 gctctttcac accagttttt taatgcacta atgcttggta caaaataaat atttggaatt
     9601 ttagaataag ttttattagg cacaagagcg atttctctct catcttctat atacatggta
     9661 tctaaaaaaa caactccatt tttattaagt cctgctttta aatcttttag catttttata
     9721 ggatcacttc tatgataaat caccccaaga cagaaaatca catcaaattt caagctatag
     9781 cttggaagat cttctacgcc taaaagttcg tattttatag gagttttagc taaagcgtta
     9841 atgagttcaa attgcaaacg gtatttgata gaaggatcaa aacctatgag ttttgcagga
     9901 ttaaattcaa gcattttaaa catataataa ccattattac agcctatatc agcaacgcat
     9961 ttttgagaaa tttcgttcat gaaaggcttt agaatgttga atttaataaa actttgccat
    10021 tctgtatcga tgaaaagatc gtctatttta aaaggacctt ttctccatgg tttaagttct
    10081 tttgctatag ctaagatttc atctttggct tgagaatttg tagataaatt cacgctatcg
    10141 cctaaagaaa aattacaagc aagattgaga gctttaagtt cttgaatttt agcgtataaa
    10201 gggtgattta gaaattgttt ttcaagtaaa ttttcttgca tttttatcct tgacatttgc
    10261 ttttaatgct aaattataac attaaaagct tttatggcaa tataaatctc atatgcatta
    10321 agtatttgat caaaaataaa tttttaaaaa ctcaaaaata cttcccaaag cttacataag
    10381 ctttagaact ataatcatca tctagtttat atttctttaa agctctagct aaatcaagct
    10441 tgacataaaa attccctgtt ttattataaa gcagttgtaa accataagca tccatatagt
    10501 ttgtttcact tgctctatat agtttagaat cattctcata ccaagaataa cctatatcat
    10561 aaaaaggagt gatataaaaa tcttttaaag gagtagccat tctaagtcca aagctagcca
    10621 ctacagcatt atctccttct ccatctccat tattataagc ccttactcca taaggatctc
    10681 ctaaagatat agtttcacta ctatctaatg tagctccatt gacaacttgt tgataattta
    10741 aactaaaaag atgagtaaaa gtatcattaa agaaataagc attgttaaga ttgacattga
    10801 gtttagcaaa ttttccaaag ccatctccat ctgttttaga actcattcct aatatagtag
    10861 ttcccccatc tttaacatta ccatagctta cattagcact ataagaaaaa ctatcattac
    10921 taatgccatt ataaactcct tctatactaa agcttatcgt atcagagctt ttatctatag
    10981 tcatgatatt taatcttgaa ttactaagct ttttatgata ataacttgaa gttaaataaa
    11041 aagaattata agtcgtaatc cacaaaggat attttaaatc tatacctaga ttttcagaag
    11101 ttcctataaa gtttgcattt ttataagctc ctcctaaagc atagtttctt ttagaataac
    11161 ttggagtgat ttttaaattc cctaagaaag tagtatagct tatactatag ttagtttgtg
    11221 cttcatcgct tctttgcaaa taagcattaa gactatctcc ttgatgagct atgttattaa
    11281 aactcatact ggcaccatcc ctatatctgc ctgattcttt tataccgtaa ttatccccat
    11341 aaaacaatac agaaacaaag ctatcactag gggtagtttc tatcactaca tctgttttac
    11401 ctggattatc tcctgctttt aaagaagcaa gggtttgtat gccatacatt tcattgactt
    11461 tataaactgc atcttctact aatttagtag tgatgatttc acctttgtga ttaggtaatt
    11521 tactttctat agcataatct cttacactag aattgttttg aaccacatat ttacctaaaa
    11581 cacctaaggt gatattgatt tgaatttgat cttttagttc ttgttgtggg atataagctg
    11641 tagcagcagg ataaccacta acttgaacat aataagaaat gatattggct atatcttgta
    11701 agtcttgaac tgaaatactt tcttttttgt aatcgtttaa ggcttcttgt aaaacttgct
    11761 catctaaacc tagatcttta aagtttatgt ttttattggt aatatgaaag ctaaagctaa
    11821 ctttataaat tgattcttct ttagaagtat tttttaaaga aggagtgttt gaatttgggg
    11881 ttttagtttt taaagtatta tcattagaca agttaggttg atttttttga gtgtttttct
    11941 ttgtgttgat ggtttttgaa ttattatcat cactagtatt agaatgatct atgataatca
    12001 ctccatcttt tacttttaaa gtgttgttgt agttttttga gttagcatct tctttataag
    12061 gagattgttc taacatttgt atggtttttt attatcttta gtatcactag cataaaggct
    12121 taagatagct aaactagata gtaagataat gcgttttatt taaattttcc ttagtgtttg
    12181 tttgattttt aatctttaaa ctttgtttgt tttttaattt tttaacaaga tccaaaaggc
    12241 ttttaacctt ttggatttta atcatcttga gcaaggattt cctgctttaa aattatccga
    12301 tactatacaa cattaccact ttcttgagta ctggcttcat ctatacttgc ttgtttatca
    12361 tcttcattga tatttggatc ttcatctgta gtttgtataa aaagctgtag caatgccagg
    12421 ttcttgttgt cctatggtat catttgggtt attattagaa ccgttgttgt tgctattgtt
    12481 aatatcacct gaatcggttc catcgtttct gttgttggag ttgttagatc ctaaatttat
    12541 aatggatact ggcttatagt ttgcactata ttttcattga ctgtaagatg actagttcca
    12601 tttatgctcg cacttgctaa ggttttatta gaattttcta aactagaatt agtactcgct
    12661 gtagcgattt gaagagctat tgtagcttgt tgtaaatcac tagaaacttt atctacagct
    12721 tgttttaaac ctgcaataac tttatcgcca ttattacctg ttataccact tagagctgta
    12781 ttgtaagctt taactgcttc attataagca tttgcagcag tatcgtaagt tttttgagcg
    12841 ttttcttgcc cttcggtcat tttaggaatt ttgagaaaga atttcctttg ttttaataat
    12901 ggcttgttta gcttttccta gatcaccata agaatttccc aatacttcct ttaaagcgtt
    12961 tgcaaatgtt gcattattgc tatcttgagt ttgtccatat aaagcagtaa taaaatccat
    13021 actttgatta atgcttgtta gttcatcagc tgttaatatt tttccatctt tataaaattt
    13081 acttaagtcg ctaatatcaa cactagaatt aaatttcaag tcattaaata tagaatttaa
    13141 aacttcattt gagatgttat ctttagcaat aagatcgcta gtttctttat agcctattgt
    13201 gtctgttgga tctcctcctg gtccagttaa gcctttatta gatcttatac tcaatattac
    13261 agagtcttct tttttattgt atttgatgca ggaccacgaa tgacaaatgt atcattacta
    13321 tagacattaa gatagacggt attggattgt tcttttttat ttgtaaaaat gaatttacca
    13381 taatcagtgc caccatattt catatttgaa acttgattgc ctgccatagc aactctttct
    13441 cctaccgtta tagtttctaa atttataaca tttcctgcat tggatttaat tacaggtgat
    13501 attgttttag gatttccttt aaatgctgaa agttttccat cttttgtaaa ctccttcatc
    13561 tccttatcac ctattgatga agcagacaga acaatttttt tccaccttta cccactacta
    13621 tgccattagg attgattaaa aagatattat tgcttccact attgagtgtt ccatctataa
    13681 tgagagcttt tagaaccata gacaatattt aaataatttt ggttagtttt tccttgtcca
    13741 aaatttacag tttcattact tgctatatta aaaccaccac taacacttat acttccactt
    13801 gttccatgag tgaacttacc cccacttggt aaagcatagc tttgtgtaaa aagtaaagaa
    13861 cctacaacta aagacaaaga aagtttattt aactttttca tgacttgctc ctttttgtaa
    13921 gattaagatt taagaatctt ttgtttatat ttataaaaat acaaataaat cattcctatc
    13981 ttaaaaatag gaatgattta ttttatcctt gcataaatgt ttttgtcatc ttgagatatt
    14041 cttgcttcat aagaaagctt ttgtaggttc atattttcta atctatctat agaacttagt
    14101 ttaaaatctt ctttgttttt tgcatttttt caataaagct ttgaagttct tcttgattta
    14161 aaatattaga gttttcatct ataaaacctt gctcacttta taagattaag atttctttat
    14221 ttttaatata ggggtattac tctttgaggg tgtaaagagc taatactccc tagctagaaa
    14281 tattaatagg agcatcgtat gacttcaaaa ggggagttgt gttgatttta ttggatacaa
    14341 taagataata atgctcaaag ttattaataa ttctagcttc aactttagta tttaaaatca
    14401 gtctattgtt tttacttaaa ctgatatctg aaggagctgc agcattagaa gcactataat
    14461 tatcttcata atgcaccaac gctcctgcta atatatctat gaaagtgttt ttaaatatat
    14521 ttaaattccc acctatatat aaggtattat tataagattt agcttcactt aaacctgtaa
    14581 tggctgaagg agctataaaa atagaattgt tatttttgta ctcatcaaga ttaagattgt
    14641 ttatgattaa ggtattatca tgggcattgt ttgaaagtcc agctataata cttaaaattc
    14701 cttctctttt atctgaagct acaccaaata aagtatcatt gataatgatt ttattataag
    14761 cagcttcatt ataagccata atcaaataag cattatcagc tgcattagaa gaatagtttt
    14821 ttatatctat agtattatga ttggctttat ctaaagctct tatgatgatt ttagaacctt
    14881 tatctatatt acttacatcg gtaatgcttt gaacattgtt ataatttata gtattataag
    14941 aggcttcttt agcttctgtt aatacagtta aatttctaaa agaagcaaag tctttaatca
    15001 ctacttcatt gttattagca ctactaggat aaaagtcttg gttattaaga atgtttttct
    15061 tagctgtata aatgtataca ggtaaggttg acatagaatt attaatataa actttattat
    15121 aatccgcact gccttctaag gttctagcag ctacaatatt taaagcatct ttatagcttt
    15181 gagaaagatc ggttgtggta agatcgtttt taatgttaat ggtattatga ttagctcctt
    15241 tagttgcaaa gccaccataa aaagaatgtt ggttataacc taagaagtta ttagcgattt
    15301 ctaaaggatg ttttaattct atgtttaagg tattataatt tgcttctcca ttattagaag
    15361 ctcctgcata gaagttaaac aaagcttgag caaaaatgtt ctcattgttt ttatcttttt
    15421 ttaggttttt aatatctttt aaattgatag tattatctaa ggcttgtcct tgttcggttt
    15481 ttccacccca aaaatcagca aataaaacag aattataagc taagggttgt ttatcatggt
    15541 tcatatacat atcaagatta aaaccatcta tgtctaaaag gtttttactg gcttgaaagt
    15601 ttttatctgt tccactatct atataacctg cgctaatatg agcagcagct aaactagcat
    15661 aagctttgct tggaccatgg ataatcatat tagcatcttt gataaagatt ttattgtttt
    15721 ttacattacc ttgataagct aaaccaccta caaggtgagt gattctttca tcaaaggtat
    15781 tattaccatt tttatctttt ttaggtaagg aagtaaaaaa ctctacactg ctacctgctt
    15841 ctatatttaa actattattt gtagaatctc cataagtggc tatagctccg attaaataag
    15901 gagcaccatt taaggctaaa tcataagtgt tctcaactcc catactaata tgggcatctt
    15961 tttgaagtat ggtttggtta tagcttgcat taccataatg agtaaaggta gaactcatta
    16021 agaaattcat gcgttgattg cttttagaat tactagggtt ttttatatga gtatctttag
    16081 gtttaagata aaaaactgaa ctaagttctc cttgttctaa tataagttta ttataacttg
    16141 catcagcatg atcggttttt gctgtgatta aaaaaggaag cactctaact gtttttatac
    16201 tatgaccggc tgtattaaca ccatgccttg ctttaaaaga aagaacttca tcttctctca
    16261 tatcaggagt aagtaaataa tgtttaaaat ttaaatcgtt tatatttgta atatttggtt
    16321 taggattgtt atatattaaa gtaatattgt taatatattg tttagaactc ttagcataat
    16381 aatttatacc ttggagtttt tataagtaga attggtttta tcataaagtt cgttatcatt
    16441 aaaataatgc tctggaatat tgaaatttcg attgtctgta gtatttgctt gagtggctgc
    16501 aaaagcgttg atgcttaaga aggtaacaat agaaagttta aaacaaaatt tctctatacc
    16561 ccctccccgt gaagttaaaa agctttatta aattaagatt gggcggaatt ttttaatata
    16621 aactaaaaag cgatatcaaa gaatttccgt tgtataatct aatgtttttt aaatgtaaaa
    16681 tattttttaa ggtaaagcga tgaaaatgcg tgtgtattat gaagatactg atgcgggtgg
    16741 agtggtgtat catagtaatt atttaaaatt ttgcgagaga gcaagaagtg aaattttttt
    16801 caataaaaaa gtagatattt ttgatgcgtc taagggacat tttttgcttg caaaagcaaa
    16861 ttgcaatttc ttaaaacctg caaaacttgg agatatgata gagattaaaa caaaaatttt
    16921 agaagtcaaa aatgcttctg tggaaatttt acaagaaatt tataaagatg aaattttgct
    16981 ttttaaaatg gaattaactt tagcttttat taaaaacgaa aaaccagcta gaatggatat
    17041 gcagttaaaa aagctctttg aagaattatt ttaattcttc aaagcttgct tgtttgcctt
    17101 gcataagacg cactttgtaa tcaacttgag aatttttgat tttctcatca aataaacttt
    17161 cgcttttttt atttaagaat tcggtataaa agtaatcaac tcctatacta gtagcataag
    17221 caatccagtt ataatctata ctttgattaa aaatttcatt aagatagact aggttatcat
    17281 cgtggttatt gatagaatta gcaatgataa aattttctct atctccttgt tgtgttaaac
    17341 ttaaaaatgt tggattatag ttgatttgag tggataaaag cacataagga tgaatgttat
    17401 aaattcttag ctgagaactt gctagagctg ttttgatcaa tggagtgtta aaaaatattg
    17461 aggcattatt aactccacct tgtgatctta aaagcctgct aaaatcaagc ttctcgcctt
    17521 ctatggtata tattctagca ttattatttt gagcaagaat tcttgaattt agattgcttg
    17581 ataaggcaga gccatcgcta aatattgcga tattagcatt tgatttgctt aaaagtgtgg
    17641 caatttgagc atcatagtca atacttccaa aaataatatt ttgatttgaa atttgtatgt
    17701 tgtttttatg gatagtcggt atgaaaattt tcatatttcc tgagtaattt ttcaactcat
    17761 tagcaccttt taaggtaaat ccagctatgg catactgata tccttgagct tgtgctgcat
    17821 caagcgcggc tcgaatttta tcattatctt ctgtgccggt taaaaaaact tttactttga
    17881 tttcagctct ttgtcttaaa agataggcta tgcttgaatt tattatagta tttgagtagc
    17941 tttttatggt tttttctggg ataattatcg caagtttaac agaagtaatt ttttgaacat
    18001 ttttttcaaa atcagtaatg gaatttaata attttgcata aacattagat aaaaattgat
    18061 cgttttgatc tgcaaattca cttaaaaaac taagatacaa tcttgattct aaaagatcaa
    18121 aaagacaatt tgtgttgcat tcttgaacgc ttaatttagg ataaaaattt tcaactggtt
    18181 ttacatcgac taatttttgc tcttttgcat taagcaaaaa gcaagataag a
//
LOCUS       DAPIVO010000039        17628 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.039, whole genome shotgun sequence.
ACCESSION   DAPIVO010000039 DAPIVO010000000
VERSION     DAPIVO010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17628)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17628)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17628
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.039"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            57..2252
                     /locus_tag="RJ239_001147"
     CDS             57..2252
                     /locus_tag="RJ239_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase 3"
                     /protein_id="HDV7331271.1"
                     /translation="MRLFIAEKPELGRAIAEGLDGNYKSGEGYIQKGDNIVTWAFGHI
                     LELAKPEEYDEKYKLWKLEDLPLPIKEFKYLPKKESKKQLKIICDLIHSDKITSIVNC
                     GDADDEGQILVDEIIQYSKTSKPVFRVLINDLTPKAVKEEIAKIKPNADFKGMSERGF
                     ARSQADWIVGINLTRAYTIMARKNGYEGVLSVGRVQTPILSLIVNRDKEFENFKSIDY
                     YSLLGDFNINNNTIKARLKTEDKILDENLAKEIKESCENQNAKINLKIENKKEYPPLP
                     YNLLVLQAECAKLFGFSPDKTLEITQNLREKHKAITYNRSDCQYLPETMFEQAPNILN
                     IIKENLNSNDEIQALIASSDLTIKSKAFNDANISAHYGIIPTQNKISSQLTQDELVVY
                     NLIAKRFIIQFFHPREYQTNTINLEVNQRIFTATQNKTTKSGFRSLWQNVDSEEEQEN
                     NENDINDLSILKNGDIAKCSLIQIEKKQTKPRPYYTMTTLLKDLNSVAKYVSDERIKK
                     LLMEKDKDKKGESGGIGTPATRSNHIKTLIEREYIEVSKDKKQIIKSTKKGRDLIKLS
                     PKSLITPDMTALWFEQQKMIEISELRREQFLEEITKEVISEIQRIDKNQEFKILDNEN
                     KPKIQCPQCNKGFLTKRKGKYGNFWGCSEYMEGCKAIYPDNKGTPNFETKQASNDTTH
                     KCPQCNKGFLQRIKSKNGNSWWWGCSEFKQGCKAMYYDNNNGKPKIINV"
     gene            2650..3123
                     /locus_tag="RJ239_001148"
     CDS             2650..3123
                     /locus_tag="RJ239_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331272.1"
                     /translation="MLDYEKFQTMSKEEYFKKYNVGIRFLFGCDINQKDEIEMISLRV
                     FLPKKYFQEYKNIDIFKTMDLFKKTPLFKELIEQSIKIDFEKREFVMPDFFIKHDIEI
                     IPYFTQGGEKEEELSKEKFFELLKQNKIKELNYLCFLFFGLFCEEEYEYFCKVKE"
     gene            3127..3450
                     /locus_tag="RJ239_001149"
     CDS             3127..3450
                     /locus_tag="RJ239_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011117569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331273.1"
                     /translation="MISVTLLFFLFGLNKLLFNAKNTIYKLLSYIKIHAIFINLRTLL
                     FLILVFNADLSYMGTVLFLVDLMTAISIFFAYAQLAYGFSIKDCMFYLVCGKIDKEWL
                     KEIQK"
     gene            3447..3842
                     /locus_tag="RJ239_001150"
     CDS             3447..3842
                     /locus_tag="RJ239_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331274.1"
                     /translation="MTEEKLIKKEIFSYTIFIAIIALICIFKNEIWEFVKFIFSNLDF
                     ICGNFANFVSEDNIIFFPVTTLLIVFTIAICAVWGLSNVLSLSLFIMPIFVAVFYIFN
                     IDISLKNLYSSYFIFLIIINGLLWSANQR"
     gene            3839..4084
                     /locus_tag="RJ239_001151"
     CDS             3839..4084
                     /locus_tag="RJ239_001151"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331275.1"
                     /translation="MKKITIVAYAICFLSGLWFLFSAIKEHFGILSFILGIALIYFGV
                     INIKRILNDSNENKNSKRIKRKTEREREELILKKIGE"
     gene            4089..4355
                     /locus_tag="RJ239_001152"
     CDS             4089..4355
                     /locus_tag="RJ239_001152"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331276.1"
                     /translation="MLEIDNNKEFKILRLNKQEILKIGGYGICDSCNKALSNDGFMIC
                     VLFSCYCEKCYQKWYKVAINHKEDREIEKDVYENIKSKITNIYF"
     gene            4413..4973
                     /locus_tag="RJ239_001153"
     CDS             4413..4973
                     /locus_tag="RJ239_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331277.1"
                     /translation="MIISVVNKKGGVGKTPFAFSIAKDLEYFLQSNDNSIIEKIYPEK
                     AKILPTPKKIDNCVYDFGGFVEKGVLDIIKESNKIIIPCTSNYNSLLRTLETLNEIGN
                     DDRVCILVTDYRDEKEKRQICETLESNFTDLNLFFFKFSKIIENSMSSGASFTELYNE
                     NNLSRLSYTNFFNEYQRLLDFIRKDK"
     gene            4976..5242
                     /locus_tag="RJ239_001154"
     CDS             4976..5242
                     /locus_tag="RJ239_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002804244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331278.1"
                     /translation="MEKKPFTIAEALNSETSSQKTFKKADKKSAGRKTIDQKLRRDNL
                     VVCRLNEQEMEILKKLMDLDLVSEYGTYIRKLILKEARALNINS"
     gene            5289..11084
                     /locus_tag="RJ239_001155"
     CDS             5289..11084
                     /locus_tag="RJ239_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002817902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDV7331279.1"
                     /translation="MSKKTKRQIEDEKDYGGRSLFDLIELEFSQGEENEQQNRELSEH
                     REVTDNIERTSISSNTPSVDRQENSAIQFDNTREMGRVLSEHNQESRNVRSHDTSITT
                     SSNGISNFGEQRSKQEERSGANRYGDTSGRTDKSQSIHSNRTPNLFSFISRNDDERQG
                     TDTRRNNQQSVLETATRNDGYERRSLKSGQKLDFVSDDEIYLGSLKDRFQKNLQAIKL
                     SKTIEQENRYATKQEQEILNKFSGWGGIPQAFDHQNKEWEKEFKELISTLDYAEYEKA
                     KTSTLDAFYTPKIIIDTIYQGLNQLGFNNDGHTKEIFEPSAGIGSFLSYAKNYSDKYH
                     FTCVELDTISANILKHLHPNQTIYNKAFQHHLFDKPYDAFIGNPPFGQKKILDLNDTT
                     LNKTSVHNYFIGNAIKNLKEDGIAAFVVSSYFLDSKNSTIRNYIAEQATFLGAVRLPN
                     NAFKKRANTEVTTDIIFFKKGKDLNIDKSWLESVEYYDDRFDEAEKRGMHPDVFNDFR
                     INEYFKNNPQNILGKMNIKSSQYGYSLECLDDGRDLKIALENFTKTLPKNIYKYQETK
                     IKLSYYRIDRESPEYEKYSKTLSKLKDGNYFEYNNEIYMKIRSDDELVFSKPVLNEHD
                     TRRIKKLIALRDQFNTLIEYEKNESSDLLVENQRKYLNKLYDEFVAKEGYLNRDANKK
                     AFREDVEANKILALEKNYSSGISKSVALKEGIDPIAPSATKADIFFKRTINAQKEIKI
                     STPKEALIASINEYGRIDLKFLETNLNQPLEETLKSLEQDRLIFKDHKNPANYVLAEK
                     YLSGNVKAKHKEVKKLVEDGFNEFVNNLESLEQVLPKDLKAVDISISLGTTWIPIKYY
                     KQFIEETLQITPKDYDLFLMEKTGEWSLKGFGHSLSPYIRSQYATEKIGCFDLFEHGL
                     SRKPIRIYDKKLDPSGKEIRELNPKETAIANSKLENLKNEFIEWIYKDYDRRTDLENI
                     YNERFNTNIEPQYNGEHLELPNFNANIKLKKHQKNAIYRAIQENSIIFDHQVGAGKTL
                     VAICSVMEQKRMGLLNKPLIVVPNHLARQWNDEFYHAYTNANILVATNDDLKKDNREK
                     FFSKIATNNFDAIIMTHSQFKLIPAPYEVIKKQYEEDINILEQTLEKKQNDDNVMRYS
                     VKDLEKRIENFKVKLSDLQTTHKKSKAIDFSELGIDALIIDEAHEFKNLLITTSMGDI
                     SGLGNLKGSQKAYDLYSKTQYIHEQNKKLYFLTGTPISNSITELYTLQRYIQPNILKE
                     KGIQAFDSWASTFGEVTNAWELDSSGINYKIVARFNKFKNVPELSTMYKSVADIVTNN
                     DIMKYQKDFVPKLYNDKPINIVAPRSEEIAEFIGIQDENGRWNEGSIVWRMEHQQDDI
                     TRNNLLACTTDARKAGLDFRLINPHCDDYANSKINKLIENVFNEYNAWNDDKGTQLIF
                     CDLSTPKQHSQKVALNGNIATPNLNKEEFVNINETIEQTEEENSKSLDELLAEQAKFD
                     VYTDILKKLVAKGIPQNEIRFIHDAKTDLQKGQLFADMNSGKARILIGSTQKMGAGTN
                     VQKRIVALHHLDCPWRPSDLEQRSGRVIRQGNELFMRDPQNFRVKEFRYATERTYDAR
                     MWQVIESKARSIEQFRKAGADVRTLEDVTSGAADAAEMKAEATGNPLILLQVQLNSDL
                     RQEEMLYSGYKRQIHNNEESLITNLSKIELLKKDIAKMEILNSIIKENNSEHFQGKYY
                     INDDEKDFIVFKNDTSDLNKSRQAELERNFEKIVKTIADDYQKEYKVLEFKGLLISGE
                     RTDLNTLNFYVSTTDGKTIIEPENLIYKRDEKTFFKLESYVNFGGFVKRLNNFYNDLE
                     KFTQLNKNKIENLEKEIVELKSITGDNTPKYKRKDYLEALREDNRIIMDEIEKMSKQK
                     NYKSDFVPKSPKILEDLNKQSKTIKENEIGY"
     gene            complement(11176..12120)
                     /locus_tag="RJ239_001156"
     CDS             complement(11176..12120)
                     /locus_tag="RJ239_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002808954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDV7331280.1"
                     /translation="MFKEVCNTLRMSRTELAEKLGLSKTTIDSWSDSSRISKTAKVAL
                     ELMLENYKLRSTIKNFQDGFASLNSYNLGENMMNNVFSKDHNDLINRINHIFNELKLS
                     EITCSRAMGESNYAKINQILNFKMYPDFDFLEKFALRFKINHNWLLTGEGSPFASDLI
                     KSNFNSQFIKEAEEFDRIYIVTSKNNLDHTRIIVINRNNEFGLYQTYFCIGSNFIMEA
                     RECSDLCDLYEFYQKFKYKISCLEFNEDDYRKLLSLKYYPKNILDRGQTSYMLFDLFD
                     LREDDKERYGEFFEKCINIIKSTLKDRENRRIERNGIN"
     gene            complement(12250..13638)
                     /locus_tag="RJ239_001157"
     CDS             complement(12250..13638)
                     /locus_tag="RJ239_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002864936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HDV7331281.1"
                     /translation="MSRSIRIFDDEIIAKKVFTKIENASKLPLNYINKNRDKYAKDIK
                     TGKLVSKNMFRKNTEVVVKITSGSKNSQALSKHLDYISRDGNVELITNDFDRYAGEDE
                     ILEVKRIFKNEGSPIPLYKEGAKEKRHTINMVFSMKEHSTTPKEKLQQAVITTLKRMY
                     PNNFFVVAFHNDTDNPHCHVCLKVADKNGKRINPKKADLANLRAEFAKALNELGVEAK
                     ATNKKQREVEINQEFSVKLNANNEINQAPKIKMHYYQVMDFGEANYQFSTDKNAKKSY
                     YVSYKTKKGITTIWGQDLERIVRENKVLRGEYARFKIVGQEEYEIKRKAKINNKWQEV
                     VKTLKKPIWEVSVIGREKDLKQINKAKTTKKYKIIQDKGVNNERDYTKQYRQRVLQEL
                     GNKSTIRRETAQERNSMRILSKQPMVHNTKRTQMLLHINALNQLQQGERGRSDNILRW
                     TSVRNNEIKRDG"
     gene            complement(13638..14189)
                     /locus_tag="RJ239_001158"
     CDS             complement(13638..14189)
                     /locus_tag="RJ239_001158"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331282.1"
                     /translation="MNKNNNCVIKVSKDDKIILEYIKSETNASYSKIISILLKKFNSC
                     DTDEKNKINDEISKNKFYTSDENKIIKLKLTENEVNILKEISKNTGFSSITKQAKFLL
                     LNSIKNEKLFTNIEIDKFIKTRTEINAIGKNIYQLLKILRSGNSVKINENNLNKTMDN
                     IRDKIDILSDQLGAIIEKNNERI"
     gene            14383..14664
                     /locus_tag="RJ239_001159"
     CDS             14383..14664
                     /locus_tag="RJ239_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331283.1"
                     /translation="MFKESKLIEELKREYDEKLKKLRQKEKENKERIYKKFSSALFKD
                     FEINEDFKNEFNLLVEKFDCKNTKNILDKINNLYDFNHRNDKIDTAKKQ"
     gene            14693..15304
                     /locus_tag="RJ239_001160"
     CDS             14693..15304
                     /locus_tag="RJ239_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002864057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTPase"
                     /protein_id="HDV7331284.1"
                     /translation="MEKDYKIKVTDVSELNEQYKEAIQEGTYEGEDVNKFFNTIKTFD
                     VAESLLKKDFSNQYIKFDIITDKEKIPLNIRLGDKNFQKGIEHLINIGSSKLIKENIN
                     PEIKKDLNNRLGIYKPKIYDEMLDGTFKAIKNLSEVANKDVGVMILEFANSYSETREK
                     FEKKQINKSSFFKEKMNEFFKKKLNKILPDREISNEKTYSRSR"
     gene            15308..15961
                     /locus_tag="RJ239_001161"
     CDS             15308..15961
                     /locus_tag="RJ239_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002804272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331285.1"
                     /translation="MNNTINFNELFSQIRLSSYNNDIVKHYDNLKCVGKITPKLATLE
                     IILRNKLDNKLSEKDNDWIKNSNDEKIKKSKEEIEHREKNRILSHHQYLSRISLGTII
                     HLIKENKLQNSIMDLKNINFRNYNQYNRNFFFENGIKLRFRNTHKVDIVLSLLQNLRN
                     RSYHWENILKTTEKNGKHYPRLTTKIKNTHIGVDPQKIDFFLSDLIKTFNEKILEYC"
     gene            16080..17306
                     /locus_tag="RJ239_001162"
     CDS             16080..17306
                     /locus_tag="RJ239_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002823310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HDV7331286.1"
                     /translation="MPQKRIYLYVPFKDKEKAKSLGAMWDDKEKKWFAPKTLDKNIFS
                     QWLYPHQNKEFSFDENEVLTAFKSALENQGLIIEGLPIMDGKIHRVKTTNDKGRELSG
                     AYNGFLDDYPAGFMQNFKTGIKENWKMPIEKNQSNNIKNSQKLHEQIKKDQELREKEI
                     LTLQEKTALKLENEYNNARWANSNHAYLKKKGFDENFYLKQDNKGSLLIPLKDENGKL
                     WSVQRIFPNGDKIIGVIKTQEEKDQGVEYLAKKQGCFHIIGAKSLEHCKEFIITEGFA
                     TAATIYKALNKPVIMGVDAGNLSKIVETLKNKFQNTPITLIADNDKKRELKGLSNVGV
                     ETAKEIQQKFSDIKVIIPKISNQEAEQGISDFNDIFLNKGIDEVKKQLNFIDFHNKLK
                     SFKSMEKTQPEKEITR"
     gene            17414..>17628
                     /locus_tag="RJ239_001163"
     CDS             17414..>17628
                     /locus_tag="RJ239_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HDV7331287.1"
                     /translation="MKNTIKLALLGAVITGVFSACSSEPKTVQYYEDPKNATELEAKI
                     KECDKNANSAKTDTECANAYKANYSKS"
BASE COUNT         7140 a         2188 c         2553 g         5747 t
ORIGIN      
        1 tctaatattt attaataata tagcaaacaa taagataaga tttttgaaag gcaaaaatga
       61 gattatttat agctgaaaaa cccgaacttg gtagagcaat tgcagaagga ctagatggca
      121 attataaaag cggagaagga tatatacaaa aaggtgataa tattgttact tgggcttttg
      181 ggcatattct agagcttgcg aaacctgaag aatatgatga aaaatataag ttatggaaac
      241 ttgaagactt accactaccc attaaagaat ttaaatactt acccaaaaaa gaaagtaaaa
      301 aacaattaaa aattatttgc gatttaatcc atagcgacaa gattacttct attgtaaatt
      361 gtggggatgc ggatgatgag ggtcaaattc ttgttgatga aattattcaa tactccaaaa
      421 cttctaaacc tgtatttagg gttttaatca atgatttaac accaaaagca gtaaaagaag
      481 aaatagcaaa aattaagcca aatgcagatt ttaaaggaat gagcgaaaga ggttttgcaa
      541 gaagtcaagc agactggata gttgggataa atcttactag ggcttacacc ataatggcac
      601 gaaaaaatgg atatgagggt gttttaagcg taggtagagt tcaaacacct attttgtctc
      661 ttatagttaa tagagataaa gaatttgaaa attttaaaag tatagattat tattccttgc
      721 taggtgattt taatatcaac aataatacta ttaaagcaag attgaaaaca gaagataaaa
      781 ttttagatga aaatttagct aaagagatca aagaatcttg tgaaaaccaa aatgcaaaaa
      841 ttaatttaaa aatagaaaac aaaaaagaat atccaccgct accttataac ctacttgttt
      901 tacaagctga atgtgcaaaa ctttttggtt ttagccctga taaaacatta gaaatcactc
      961 aaaatttaag agaaaaacat aaggctataa cttataatag atcagattgt caatatttac
     1021 ctgaaacaat gtttgaacaa gcaccaaata ttttaaatat tataaaggaa aatttaaatt
     1081 ctaatgatga aattcaagct ctcattgcta gcagtgattt aacaataaaa agcaaggctt
     1141 ttaacgatgc taacatttca gcacactatg gaataatccc tacccaaaat aaaatttcat
     1201 cgcaattaac tcaagatgaa ttagtcgttt acaatctaat cgctaaaaga tttattatcc
     1261 aattctttca tccgagagaa tatcaaacta atacaattaa tttagaagta aatcaaagaa
     1321 tttttaccgc tactcaaaac aagacaacaa aaagtggttt tagaagtctt tggcaaaatg
     1381 tagatagcga agaagaacaa gaaaataatg agaatgatat aaacgattta tctatcttaa
     1441 aaaatggtga tattgcaaaa tgctctttga tacaaattga aaaaaagcaa acaaagccac
     1501 gcccttacta cactatgaca acgctactta aagatttaaa tagtgtcgca aaatatgtgt
     1561 ctgatgaaag aattaaaaaa ttgctaatgg aaaaagataa agacaaaaag ggtgaaagtg
     1621 gtggcatagg aacacctgca acaagatcta atcatataaa aacattaatt gaaagagagt
     1681 atatagaagt aagtaaagat aaaaaacaaa ttatcaaatc cactaaaaaa ggtagagatt
     1741 taattaaact ttctccaaaa tcacttatta ctcctgacat gacagcattg tggtttgagc
     1801 aacaaaaaat gatagaaata tcagaattaa gaagagaaca attcttagaa gaaatcacaa
     1861 aagaagtaat tagcgaaatt caaagaattg ataaaaatca agagtttaaa atactagata
     1921 atgaaaacaa accaaaaatt caatgtccgc aatgcaataa aggattttta accaaacgaa
     1981 aagggaaata tggaaacttt tggggttgta gcgaatacat ggaaggttgc aaagccattt
     2041 atcctgataa caaaggcaca ccaaactttg aaacaaaaca agcaagcaac gatactactc
     2101 ataaatgtcc gcaatgcaat aaaggatttt tacaaagaat aaaaagtaaa aatggtaata
     2161 gttggtggtg gggttgtagt gaatttaaac aaggttgcaa ggctatgtat tatgacaata
     2221 ataatggaaa acctaaaata ataaatgtat aacattaata aatattaatt tattttaatt
     2281 aatttaagtt aattttaata aataatattt tataataatt caaataaatt agaaacaagg
     2341 ttgtccgagt ttaatcagaa taaaaggaga aaattatgaa taacaaaaga aaagttaggg
     2401 aatttctgtc ttatacggag aaatatctgt cttatgtatt atttatttgt ataggttctt
     2461 gtttcgttgc tttaatacta agtgcgagca ttgatagtga tttttactca ctttttatta
     2521 ttttagcttt aggaactacg atcagtcctc ttatttgtat cgggttggtt aaattaatag
     2581 aaaaattaat aaaaataata aaaaaataaa aacaatgaaa attgcataaa aaatagggtg
     2641 agaacaataa tgcttgatta tgaaaaattt caaacaatga gtaaagaaga atattttaaa
     2701 aaatataatg tcggaattag gtttttgttt gggtgcgata tcaatcaaaa agatgaaatt
     2761 gaaatgataa gccttagggt ttttttgcca aagaagtatt ttcaagaata caaaaacatt
     2821 gatattttta aaacaatgga cttatttaaa aaaacaccat tatttaaaga attaatagag
     2881 caaagcatta agattgattt tgaaaaaaga gaatttgtaa tgcctgattt ttttattaag
     2941 cacgatatag aaatcattcc ttattttacg caaggtggcg aaaaagaaga agaattaagc
     3001 aaagagaaat tttttgaact tttaaaacaa aacaagatta aagaattaaa ctatttatgc
     3061 tttttgtttt ttggcttgtt ttgtgaagaa gaatatgagt atttttgcaa agtaaaggag
     3121 taaaaaatga tttcagtaac gcttttattt tttctttttg gactaaacaa acttttgttt
     3181 aatgctaaaa atacaatata caaactatta agttacataa aaattcacgc gatttttatt
     3241 aatttaagaa ctctactttt tttaatattg gtatttaatg cggatctatc ttatatggga
     3301 acagttttat ttctagttga tttaatgaca gctatatcta tattttttgc ttatgctcaa
     3361 ttagcttatg gtttctcaat taaagattgt atgttttatc ttgtgtgtgg aaaaatagat
     3421 aaagaatggt taaaggagat acaaaaatga ctgaagaaaa attaattaaa aaagaaatat
     3481 tttcttatac aatttttata gcaattatcg ctttaatttg catttttaaa aatgaaattt
     3541 gggaatttgt aaaatttatt ttttctaatt tagatttcat atgtggtaat tttgcaaatt
     3601 ttgtaagcga agataatata atattttttc cagttacaac tcttttaata gtatttacta
     3661 tagctatttg tgctgtttgg ggattatcta atgttttatc tctctcatta tttataatgc
     3721 ctatatttgt cgcagttttt tatattttta atattgatat aagtttaaaa aacctttata
     3781 gctcttattt tatattttta atcattatta atggtctttt atggagtgca aatcaaagat
     3841 gaaaaaaatt acaatagtag catacgcaat atgtttttta tcaggcttat ggtttttatt
     3901 tagtgctatt aaagagcatt ttggcatttt atcttttatt cttggaattg cacttattta
     3961 ttttggtgtt attaatataa aaagaatttt gaatgattct aacgagaata aaaatagcaa
     4021 aagaattaaa agaaaaactg aaagagaaag agaagagcta atcttgaaaa agataggaga
     4081 gtaataaaat gctagagata gataataata aagaatttaa aatcttaaga ctaaacaaac
     4141 aagaaatttt aaaaattgga ggttatggca tttgcgacag ttgtaataaa gctttaagca
     4201 atgatggatt tatgatctgt gttttattta gttgctattg cgaaaaatgc taccaaaaat
     4261 ggtataaagt tgcgattaat cataaagaag atagagaaat tgaaaaagat gtttatgaaa
     4321 atattaaatc gaaaataact aatatttatt tttagttctt attaataaat attagtatat
     4381 aatattatac aaaaatataa aaaaggtttt ttatgataat atctgttgta aataaaaaag
     4441 gtggtgttgg aaaaactcct tttgcttttt caattgctaa agatttagaa tattttttac
     4501 aaagcaatga taattctatt atagaaaaga tttatcctga aaaagcaaaa attttaccaa
     4561 ctccaaaaaa aatagataat tgcgtttatg attttggtgg ttttgtagaa aaaggggtat
     4621 tagatattat taaagaaagt aataagatta ttattccttg cacgagtaat tacaattctt
     4681 tacttagaac attggaaact ttaaatgaaa taggtaatga tgatagagtt tgtatcttgg
     4741 ttacagatta tagagatgag aaagagaaaa ggcaaatttg tgaaactctt gaaagcaatt
     4801 ttacagattt aaatctcttt ttctttaaat tttcaaagat aattgaaaat tctatgagta
     4861 gtggagcttc ttttactgaa ctttataatg aaaacaatct ttcaagatta agttatacaa
     4921 attttttcaa tgagtatcaa agacttttag attttattag aaaggataaa taataatgga
     4981 aaaaaaaccc tttacaatag cagaagcttt aaactctgaa acaagctctc aaaagacttt
     5041 taagaaagct gataaaaaat cggctggaag aaaaactata gatcaaaaac taagaagaga
     5101 caatttagta gtttgcagac ttaatgaaca agaaatggaa attttgaaaa aattaatgga
     5161 tttagattta gtaagtgaat atggtactta tataagaaaa ttaatcttaa aagaggcacg
     5221 agctttaaat attaatagtt aaaaatgtta aaatatcctt gcaaaaaaca aaaattacaa
     5281 ggatacaaat gagtaaaaaa acaaaaagac aaattgaaga tgaaaaagat tatggcggtc
     5341 gaagtttatt tgatctaatc gaattagaat tttcacaagg agaagaaaat gagcaacaga
     5401 acagagaatt atccgaacat agagaagtta cagacaatat tgaacgaact agcatttcat
     5461 caaatacacc aagcgtggat agacaagaaa attccgcaat acagtttgat aatactagag
     5521 agatgggcag agttttatcc gaacacaatc aagaatctag gaatgtcaga tctcatgaca
     5581 ctagcattac cacaagctca aatggaatta gcaattttgg agagcaaaga agcaaacaag
     5641 aagagagatc aggggctaac agatatggag atactagcgg aagaacagat aaatctcaat
     5701 caatacatag caatagaacc ccaaatttat tctcctttat ttcaagaaat gatgatgaaa
     5761 gacaaggaac agatacaaga agaaacaatc aacaatcagt attggaaact gcaacaagaa
     5821 atgatggata tgaaagaaga agcctcaaat ctggacaaaa attagatttt gtaagcgatg
     5881 atgaaatcta tctaggttct ttaaaagata gatttcaaaa aaacctccaa gccattaaac
     5941 tttcaaaaac tattgaacaa gaaaatcgct acgctaccaa acaagaacaa gaaattctaa
     6001 ataaattttc aggatggggc ggtattcctc aagcttttga tcatcagaat aaagaatggg
     6061 aaaaagaatt taaagaactt attagcacac ttgattatgc agaatatgaa aaggcaaaaa
     6121 cttcaacttt agatgctttt tacactccaa aaattattat cgatacaatt tatcaagggc
     6181 ttaatcagtt aggatttaat aatgatggtc acaccaaaga aatatttgag ccaagtgcag
     6241 gtataggctc ttttttgtct tatgcaaaaa attatagcga taaatatcat tttacttgcg
     6301 tagagcttga tactataagt gcaaatatat taaagcattt acacccaaat caaacaattt
     6361 ataataaagc atttcagcac catttatttg ataagccata cgatgctttt ataggtaatc
     6421 caccttttgg tcaaaaaaag attttagatt taaatgatac tacacttaat aaaacaagtg
     6481 tgcataatta ttttatcggt aacgcaatta aaaatttaaa agaagatgga attgctgctt
     6541 ttgtagtatc aagttatttt ttagattcta aaaatagcac aataagaaat tatatagccg
     6601 aacaagcaac atttttaggt gctgtaagat tgccaaataa tgcttttaaa aaacgagcta
     6661 atacagaagt tactaccgat attatctttt ttaaaaaagg taaagattta aatatagata
     6721 aatcttggct ggaaagcgta gaatactatg acgatcgttt tgatgaagct gaaaaaagag
     6781 gtatgcaccc tgatgttttt aatgacttta gaataaatga gtattttaaa aataatccac
     6841 aaaatatctt aggaaaaatg aatattaaaa gctctcaata tggttatagt ttagaatgct
     6901 tggatgatgg aagagattta aaaatcgctt tagaaaattt tacaaaaacc ttacctaaaa
     6961 acatttataa atatcaagaa acaaaaatca agctatctta ttacaggatt gatagagaat
     7021 cgcctgaata cgaaaaatat agcaaaactc taagtaagtt aaaagatgga aattattttg
     7081 aatacaataa tgaaatctac atgaaaatca gaagcgatga tgagttagtc ttttcaaaac
     7141 ctgttttaaa tgaacacgat acaagaagaa ttaaaaaact cattgctctt agagatcaat
     7201 ttaacactct tattgaatat gaaaaaaatg aatctagcga tcttttagta gaaaatcaaa
     7261 gaaaatatct aaacaagctt tatgatgaat ttgtagccaa agaaggatat ttaaatagag
     7321 atgcaaataa aaaagccttt agagaagatg tggaagcaaa caaaattttg gcactagaaa
     7381 aaaattatag cagtggtatt tcaaaaagtg tagctttaaa agaaggtata gatcctattg
     7441 caccaagtgc aacaaaagca gatatttttt tcaaaagaac tataaatgca caaaaagaaa
     7501 ttaaaatctc gactccaaaa gaagcattaa ttgctagtat caatgaatat gggagaattg
     7561 atttaaaatt tttagaaacg aatttaaatc agcctttaga agaaaccctt aaatctttag
     7621 agcaagatag attaatcttt aaagatcaca aaaatcctgc aaattatgtt ttggctgaaa
     7681 aatatctttc tggcaatgtt aaagcaaagc acaaagaagt aaaaaaatta gtagaagatg
     7741 gctttaatga atttgttaat aatttagaaa gcttagaaca agtcttgcct aaagatttaa
     7801 aagcggttga tatttcaata agcttaggga caacatggat acctataaaa tattacaaac
     7861 aatttataga agaaacctta caaattactc ctaaagatta tgatttattt ttaatggaaa
     7921 aaacaggcga atggagtctt aaaggttttg gtcattcttt aagtccttac atcagatcac
     7981 aatatgctac cgagaaaata ggttgttttg atttatttga gcatggatta tcaagaaagc
     8041 ctattcgcat ttatgataaa aaactagatc catcaggaaa agaaatcaga gaattaaatc
     8101 ctaaagaaac tgcaatcgct aattctaaat tagaaaattt aaaaaatgaa tttatagaat
     8161 ggatttataa agactatgat agacgcacag atttggaaaa tatctataat gaaaggttta
     8221 atacaaatat agaaccacaa tacaatggag agcatttaga acttccaaat ttcaatgcca
     8281 atatcaaact caaaaaacac caaaaaaatg ctatatatag ggctattcaa gaaaatagta
     8341 ttatttttga tcatcaagta ggcgctggaa aaactttagt ggcaatttgc tctgtgatgg
     8401 agcaaaaaag aatggggctt ttaaataaac ccttaattgt agtccctaat catttagcaa
     8461 gacaatggaa tgatgagttt tatcacgcct atacaaatgc aaacatttta gttgctacaa
     8521 atgatgattt aaaaaaagat aatagagaaa agtttttttc caaaattgca acaaataatt
     8581 ttgatgccat cattatgaca cactcgcaat ttaaattaat ccccgcacct tatgaagtta
     8641 tcaaaaaaca atatgaagaa gatattaata tcttagaaca aacattagaa aaaaaacaaa
     8701 acgatgataa tgttatgcga tattctgtaa aagacttaga aaaacgcatt gaaaatttta
     8761 aggtgaaatt gagtgatttg caaactacac ataaaaaatc taaagcaata gatttttcag
     8821 aattaggaat tgatgcatta attattgatg aagcacatga gtttaaaaat ttactcatta
     8881 caacttcaat gggtgatata agtggtcttg gcaatttaaa aggctcacaa aaagcttatg
     8941 atctttattc taaaacacaa tatattcacg agcaaaataa aaaactctat tttttaacag
     9001 gaacgcctat aagcaattca attacagaac tttatacttt gcaaagatac atacaaccaa
     9061 atatcttaaa agaaaaaggg atacaagctt ttgattcttg ggcttctact tttggagaag
     9121 ttacaaacgc ttgggagctt gatagttctg gaataaatta taaaatcgtt gcaagattta
     9181 acaaattcaa aaatgttcct gaactttcta ccatgtataa aagcgtggct gatattgtaa
     9241 caaataatga tattatgaaa tatcaaaaag atttcgtgcc aaagctttac aatgataaac
     9301 ctattaatat cgttgctcct agaagtgaag aaatagcaga atttataggc attcaagatg
     9361 aaaatggaag atggaatgaa ggctctattg tgtggagaat ggagcatcaa caagatgata
     9421 ttactagaaa taacttactt gcttgtacca cagatgctag aaaagctgga cttgatttta
     9481 gacttattaa tccacattgt gatgattatg caaattctaa aattaataag cttattgaaa
     9541 atgtttttaa tgagtataat gcttggaatg atgataaagg cacacaatta atattttgtg
     9601 atttatccac tccaaaacaa cactcacaaa aagttgctct aaatggcaat attgctacac
     9661 caaatttaaa taaagaagaa tttgtcaata ttaatgaaac aatagaacaa acagaagaag
     9721 agaatagcaa aagccttgat gaactcttag cagaacaagc aaaatttgat gtatatactg
     9781 atatcttaaa aaaacttgtc gcaaaaggta ttccacaaaa tgaaattcgt ttcattcacg
     9841 atgcaaaaac agacttacaa aaaggacagc tttttgcaga tatgaactca ggaaaagcta
     9901 gaattttaat tggatcaacg caaaaaatgg gtgctggaac aaatgtgcaa aaaagaattg
     9961 tagccttaca ccatttagat tgcccttggc gtccgagcga tttagaacaa agaagcggta
    10021 gggttataag acaaggcaat gaactcttta tgagagatcc acaaaacttt agagtaaaag
    10081 agtttagata tgcaactgaa agaacctatg atgctagaat gtggcaagtc attgaaagca
    10141 aagcaagatc catagaacaa tttagaaaag ctggtgctga tgtaagaacc ttagaagatg
    10201 ttacaagtgg tgcagctgat gctgcagaaa tgaaagcaga agcaacaggc aatccactca
    10261 ttttactaca ggtgcaatta aatagtgatc taagacaaga agaaatgctt tatagtggtt
    10321 ataaaagaca aatacacaat aatgaagaaa gtcttataac taatctttca aagattgaac
    10381 tactaaaaaa agatatagct aaaatggaaa ttttaaattc aatcatcaaa gaaaacaata
    10441 gcgagcattt tcaaggaaag tattacatta atgatgatga aaaagatttc attgtcttta
    10501 aaaatgatac gagtgatcta aacaaaagca gacaagcaga acttgaaaga aattttgaaa
    10561 agattgtcaa aacaatagct gatgactatc aaaaagaata taaggtttta gagtttaaag
    10621 gactgcttat aagcggagaa agaacagatt taaacactct taatttttat gtgagtacta
    10681 ctgatggtaa aacaataatc gagcctgaaa atttgattta taaaagagat gaaaaaactt
    10741 tttttaaatt ggaaagttat gtaaattttg gtggttttgt aaagagatta aacaattttt
    10801 ataatgactt agaaaaattt actcaactca ataaaaataa gatagaaaat cttgaaaaag
    10861 aaattgtgga gctaaaaagc attacaggag ataacactcc aaaatacaaa agaaaggatt
    10921 atttagaggc attaagagaa gacaatcgca ttatcatgga tgaaatagaa aaaatgagta
    10981 agcaaaaaaa ctacaaaagt gattttgtgc caaaatctcc aaagattttg gaagatttaa
    11041 ataaacaaag caaaactata aaagaaaatg aaattggcta ttagtaatta cttaaagttt
    11101 tttatttaat agcgttcatg acaaacctta actataattt ctaagtctag ttaattagac
    11161 ttagaatatt aaaaattaat taataccatt tctttctatt cttctatttt ctctatcttt
    11221 taaagtagat ttaataatat ttatacattt ttcaaaaaat tcaccatatc tttctttatc
    11281 atcttctctc aaatcaaaca aatcaaaaag catgtaagat gtttgtcctc gatctaaaat
    11341 attttttgga taatacttta aagataaaag ttttctgtaa tcatcttcat taaattctaa
    11401 gcaagaaatt ttatacttga atttttgata aaattcatat aaatcacaaa gatcgctaca
    11461 ttctctagct tccattataa aattacttcc tatacaaaaa taagtttgat ataaaccaaa
    11521 ttcattattt cgatttatta caattattct agtatgatca agattatttt tagaagtgac
    11581 aatataaatt ctatcaaatt cttcagcctc ttttataaat tgggagttaa aatttgattt
    11641 aataagatca cttgcaaatg gagagccttc ccctgtcaat agccaattat gattgatttt
    11701 aaatcttaat gcaaattttt ctaaaaaatc aaaatctgga tacattttaa aatttaaaat
    11761 ttgattgatt tttgcataat tactttcacc cattgctctt gaacaagtta tttcacttaa
    11821 ttttaactca ttaaagatat gattaatcct attaattaaa tcattatgat ctttcgaaaa
    11881 aacattattc atcatgtttt ctcctaaatt atatgagttt agtgaagcaa atccatcctg
    11941 aaaattctta atcgtacttc taagtttata attttcaagc attaattcta aggctacttt
    12001 agctgttttg gatattctcg aactatcact ccaagaatct attgtggttt ttgataatcc
    12061 taatttttca gccaattctg tcctactcat cctcaaagtg ttacaaactt ctttgaacat
    12121 aaaaaaactc cttttggaaa ataatttttg aaattaaagc ataataaaat aaaaaagtca
    12181 agtatataca tattacataa tattttatat tttttatgta atataatcta atattaattc
    12241 tcttataaat tatccatctc ttttaatctc attattccta acacttgtcc atcgcaagat
    12301 attatcggat cgtcctcgct ctccttgctg taactgattg agtgcattga tgtgcaaaag
    12361 catttgagtt cgttttgtgt tatgaaccat aggctgtttg gacaatattc gcatagagtt
    12421 tctttcttgg gcagtttctc ttcggatagt tgatttatta ccgagctctt gtaagactct
    12481 ctgtctatat tgttttgtat aatctctctc attattcact cctttatctt gtataatttt
    12541 atattttttt gttgttttgg ctttgttgat ctgttttaaa tctttctctc tacctattac
    12601 tgatacttcc caaataggtt ttttaagtgt tttaacaact tcttgccact tgttattaat
    12661 ttttgccttt ctttttatct catattcttc ttgccctact attttaaatc ttgcatattc
    12721 accccttaaa actttatttt ctctcacaat cctttctaaa tcttgtcccc aaattgtagt
    12781 tattcctttt ttggttttat agctcacata ataacttttt ttggcatttt tatctgtgct
    12841 aaattgatag tttgcttctc cgaaatccat aacttgataa tagtgcattt ttatttttgg
    12901 tgcttgatta atctcattat ttgcatttaa tttaactgaa aattcttgat ttatttctac
    12961 ttctctttgc tttttatttg tagcctttgc ttcaactcct aactcattta atgcttttgc
    13021 aaattctgct cttaaatttg ctaaatctgc tttttttgga ttaattcttt tgccattttt
    13081 atccgcaact ttcaagcaaa catggcaatg cggattatcc gtatcattat gaaaagcaac
    13141 tacaaaaaaa ttatttggat acattctttt taaagtagta attacagctt gttgtaattt
    13201 ttcttttggt gttgtagaat gttctttcat ggaaaaaacc atattaatgg tatgtctttt
    13261 ttctttagca ccttccttat ataatggaat aggagatcct tcatttttga aaattctttt
    13321 aacttctaaa atctcatctt ctcccgcata tctatcaaaa tcgtttgtaa ttaattctac
    13381 atttccatca cgagaaatat aatcaagatg ttttgaaagt gcttgagaat ttttagaacc
    13441 tgaagtaatt tttacaacga cttctgtatt ttttctaaac atatttttac taacaagctt
    13501 acctgttttt atatctttgg cgtatttatc tctattttta ttgatgtaat ttagtggtag
    13561 ctttgaagca ttttctattt tagtaaaaac ttttttagca attatttcat catcaaatat
    13621 tcttatacta cgcgacatta aattctttca ttattttttt ctattatagc cccaagctga
    13681 tcggataata tatcaatttt atctctaata ttatccatag ttttatttaa attattttca
    13741 ttaattttga cagaatttcc acttctaaga atcttcaata attgatatat atttttacct
    13801 attgcattga tttctgttct tgtttttata aacttatcta tttctatatt agtaaaaagt
    13861 ttttcatttt ttatggagtt taatagcaaa aattttgctt gttttgtaat acttgaaaat
    13921 cctgtatttt tagaaatttc ttttaaaata tttacttcat tttctgtaag ttttagtttg
    13981 attattttat tttcatcact tgtataaaat ttatttttag atatctcatc attgatttta
    14041 ttcttctcat ctgtatcaca agaattaaac ttttttaata aaatagatat tattttacta
    14101 tatgatgcat ttgtttctga ttttatatat tctaaaatta ttttatcatc tttgctaact
    14161 tttatgacgc aattattgtt tttattcatt tacacttcct taatgagcct cgcagagttt
    14221 ttgcctttta ttttttaaaa aggtaacttt ttaggaaata aaaggctatc ctgcaattat
    14281 taaattattt cgattaatcg ctattctaca ttattaagct ttataaaata ttaagactac
    14341 tttgtaataa tacatttaca taaatattat aaaggagatg ttatgtttaa agaaagcaaa
    14401 ttgatagaag aattaaagcg tgagtatgat gaaaaattaa aaaaattacg ccaaaaagaa
    14461 aaagaaaata aagagcgtat atataaaaaa ttttcatcag cactatttaa agattttgaa
    14521 ataaatgaag attttaaaaa tgaatttaat ttattggtag aaaagtttga ttgtaaaaac
    14581 actaaaaata tattagataa aataaataac ttatatgatt ttaatcatag aaacgataaa
    14641 atagatactg caaaaaaaca ataaaacaaa aatttatcat aggagaataa aaatggaaaa
    14701 agattacaaa ataaaagtaa cagatgtaag tgaacttaat gagcaatata aagaagctat
    14761 acaagaagga acttatgaag gtgaagatgt aaataaattt tttaatacaa taaaaacttt
    14821 tgatgttgca gaaagcttac taaaaaaaga tttttcaaat caatatatta aatttgatat
    14881 cattactgat aaagaaaaaa taccattaaa tataagactt ggagataaaa attttcaaaa
    14941 aggtattgaa catttaatta atattggtag ttccaaatta attaaagaaa atataaaccc
    15001 tgaaataaaa aaagatctta ataatcgact tggaatttat aaaccaaaaa tatatgatga
    15061 aatgttagat ggaactttta aagcaataaa aaatttatca gaagtagcca ataaagatgt
    15121 tggtgtaatg atattagaat ttgcaaattc ttattctgaa actagagaaa aatttgaaaa
    15181 aaagcaaatt aataaaagtt cattttttaa agaaaaaatg aatgaatttt tcaaaaaaaa
    15241 actaaataaa attttaccag atagagaaat tagcaacgaa aaaacatatt ctcgatcaag
    15301 gtaaaaaatg aataatacaa taaattttaa tgaactattt tctcaaataa gattatcttc
    15361 ttataataat gatattgtca agcactatga taatcttaag tgtgttggaa aaattactcc
    15421 aaaacttgct acattagaaa ttattcttag aaataaatta gataataaat tatcagagaa
    15481 agataatgat tggataaaaa actctaatga tgaaaagatt aaaaaatcca aagaagaaat
    15541 tgagcatagg gaaaaaaata gaattttatc tcatcatcaa tatctttctc gtataagttt
    15601 aggaactatc attcatctca tcaaagaaaa taaattacaa aactctataa tggatttaaa
    15661 aaatatcaat tttagaaact acaatcaata caatagaaat ttcttttttg aaaatggcat
    15721 aaaattacgc tttagaaata cgcataaagt tgatattgtt cttagcttat tacaaaatct
    15781 aagaaataga agttatcatt gggaaaatat tttaaaaaca acagaaaaaa atggcaaaca
    15841 ttacccaaga ttaacaacaa agattaaaaa cacacatata ggagtagatc cgcaaaaaat
    15901 agattttttc ttaagtgatt taattaaaac ttttaacgaa aaaattttgg aatattgtta
    15961 agattaaaaa atgggacaca aggagtccct cgaatttaaa aggtgggcta ctaggaagcc
    16021 ctttgaattt cattgtaatt atactgacaa aacattaaac aaagttaaaa ggatatacaa
    16081 tgcctcaaaa aagaatttat ctttatgttc catttaaaga caaagaaaaa gcaaaatcat
    16141 taggggcaat gtgggatgat aaagaaaaaa aatggtttgc tccaaaaacc ttagataaaa
    16201 atattttctc acaatggctt tatccacacc aaaataaaga attttcattt gatgaaaatg
    16261 aagtcttaac agcttttaaa tctgctttag aaaatcaagg tttaattatt gaaggcttac
    16321 ctatcatgga tggtaaaatt catagagtaa aaactactaa tgataaaggt agagaattaa
    16381 gcggtgccta taacggtttt ttagacgatt atcctgcagg gtttatgcaa aattttaaaa
    16441 caggcattaa agaaaattgg aaaatgccca tagaaaaaaa tcaaagcaat aatataaaaa
    16501 attctcaaaa attacatgag caaataaaaa aagatcaaga gcttagagaa aaagagattt
    16561 taactttgca agaaaaaacc gctttaaaac ttgaaaatga gtataataat gcaagatggg
    16621 ctaattccaa tcacgcttat ttaaagaaaa aaggctttga tgaaaacttt tatcttaaac
    16681 aagacaacaa aggttcttta cttattcctt taaaagatga gaatggaaaa ttatggtctg
    16741 tgcaaagaat atttccaaat ggagataaga tcataggagt cattaaaact caagaagaaa
    16801 aagatcaagg cgtagaatat cttgcaaaaa aacaaggttg ctttcatata ataggtgcaa
    16861 aaagcttgga acattgcaaa gaatttatta taacagaagg ctttgctact gctgcaacta
    16921 tatacaaggc acttaataag cctgtgataa tgggtgttga tgctggaaat ttatcgaaaa
    16981 ttgttgaaac cctaaaaaac aaatttcaaa acactcctat taccttaata gccgataatg
    17041 ataaaaaaag agaattgaaa ggtctttcta atgtcggagt ggaaactgca aaagaaattc
    17101 aacaaaaatt ttcagatatt aaagttatta ttccaaaaat cagcaatcaa gaagcagaac
    17161 aaggaataag tgatttcaat gatatttttt taaataaagg gattgatgaa gtcaaaaaac
    17221 aattaaattt cattgatttt cataataagc ttaaatcttt taaatctatg gaaaaaacac
    17281 aacctgaaaa agagataact agataataat agttactctt tgtaatcata atatataaaa
    17341 aatatttttt atatattatt agttaataat agtgtattat aattactata aatatacaaa
    17401 aaaaggatta aaaatgaaaa atacaatcaa actagcttta ttaggtgcag ttattactgg
    17461 tgttttttct gcttgctctt cagagccaaa aacagtgcaa tattacgaag atccaaaaaa
    17521 tgctacagaa ttagaagcta aaatcaaaga atgtgataaa aatgctaatt ctgcgaaaac
    17581 tgacacagaa tgtgcaaatg cttataaggc aaactattct aagtcatt
//
LOCUS       DAPIVO010000040        17055 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.040, whole genome shotgun sequence.
ACCESSION   DAPIVO010000040 DAPIVO010000000
VERSION     DAPIVO010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17055)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17055)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17055
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.040"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            139..274
                     /locus_tag="RJ239_001164"
                     /pseudo
     CDS             139..274
                     /locus_tag="RJ239_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857729.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:sulfate symporter"
     gene            435..833
                     /locus_tag="RJ239_001165"
     CDS             435..833
                     /locus_tag="RJ239_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDV7331288.1"
                     /translation="MKDALSGFSNSLIWFIVISIIVARGVIKTGLGEHLAYHFISILG
                     KKTLGIAYSIAFCETILAPVTPSNTARAGAIINPIVQVIARSFKSTPEDGTQNKIGTY
                     LSLVNYQEPILFHQLCLLQLQLQILWWLIL"
     gene            887..1111
                     /locus_tag="RJ239_001166"
     CDS             887..1111
                     /locus_tag="RJ239_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002885679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDV7331289.1"
                     /translation="MFLPGIAAMLLMPLMLYFLSPLEIKSTPNASTFAKDKLKELVKM
                     KNSEKIILSVFVSLLLLWAGALGLFFWNFS"
     gene            1026..1289
                     /locus_tag="RJ239_001167"
     CDS             1026..1289
                     /locus_tag="RJ239_001167"
                     /inference="COORDINATES: protein motif:HMM:NF013132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDV7331290.1"
                     /translation="MKKSYSVFLSRFYFYGLELWACFFGISLDATSVALLGLSLVLIS
                     GVLTFGEVLAEKAAWNTLVWFSALVMMATLFGKLGVTQFLAEA"
     gene            1412..1657
                     /locus_tag="RJ239_001168"
     CDS             1412..1657
                     /locus_tag="RJ239_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDV7331291.1"
                     /translation="MFFIVQLALGAPPLFYAFIMIASGNVMMALTHYAIGTAPVIFGT
                     GCVTLKKWWSIGFVISIVDIVVMIAVGLFWWKILGFY"
     gene            complement(1685..2701)
                     /gene="mnmA"
                     /locus_tag="RJ239_001169"
     CDS             complement(1685..2701)
                     /gene="mnmA"
                     /locus_tag="RJ239_001169"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HDV7331292.1"
                     /translation="MKILVAMSGGVDSTVTAYKLKNLGHEVIGCYMKLHGKPNYHEEN
                     IKKVEKVANFLQIPYHILDLQEDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLL
                     EFAKSLGCEKLATGHYARLENNLIKTAVDESKDQSYFLASADKEALKYLIFPLGEMKK
                     EDVKKFASTIEVLKSFATQKESSEICFVEDTYVQVLDQFMDTKIPGEVLDSSGKVVGK
                     HEGYMHYTIGKRRGFEVRGAHEPHFVLKINPKQNQIIVGTKEELKISEFNLKNINLFI
                     DAKELDCEVKIRYRSKSTPCKVEIYEDKSAKIILKDPVYGLASGQMAVFYDHDKVIAS
                     GFIE"
     gene            complement(2701..3306)
                     /locus_tag="RJ239_001170"
     CDS             complement(2701..3306)
                     /locus_tag="RJ239_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HDV7331293.1"
                     /translation="MNEKISQDLEKFANIPNLKNAVTFFGSARLKEDNFYYQQAKILA
                     QKCAQNGFCVISGGGGGIMRAANEGAFSQKNNTNSMSSVGFNIFLPHEQKLNDFVEYN
                     ITFESLAIRKMALIEKSLAFVIFPGGFGTLDELCEILTLKQLEFKKDVPIILFGSEFW
                     RGFDEFVRNSLLKLEVISKGDELKYKITDDLDFIINTLKEI"
     gene            complement(3427..4215)
                     /locus_tag="RJ239_001171"
     CDS             complement(3427..4215)
                     /locus_tag="RJ239_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002864361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331294.1"
                     /translation="MINSLNSNLNYDYNTSNFKQDKNIDFKINKHGVAVITGEGALPY
                     RGKKFEYNPKIFGLDESISKKDMQEFNNFMKSNALKDPNKIEKSPLKDFNPAYTKWDP
                     TTEKMMLGFFVSYSKMFHLGYDIIKKADEFYKEFDALISKDLSLNEFKTKYIDFKQRH
                     DEFVKEYEMAMGDKMLLSSDDEIITQQSEKPFKAIQGESKNKETYKDDSTRNELVKKL
                     LEGKFSTSKELELLFGMKFSDDDAGEFNKILSLNSTPKSIDIKA"
     gene            complement(4229..4723)
                     /locus_tag="RJ239_001172"
     CDS             complement(4229..4723)
                     /locus_tag="RJ239_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331295.1"
                     /translation="MKEVKGGYITYLKRLSDNEVIAFAKPDWNLELTLFQDSNGDQYY
                     WNREGLVRFGGMCGIETTNCLVNGKHSYINQKRLWETMSIVGDDPYRNFLGYTVKRNI
                     GISNLGKRFVYFSYGVAVINEQSGSWYRVKSSPVLNNYRVVKEISSNYKDFLERYLGG
                     YSIK"
     gene            5156..6008
                     /locus_tag="RJ239_001173"
                     /pseudo
     CDS             5156..6008
                     /locus_tag="RJ239_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343521.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5993..6592
                     /locus_tag="RJ239_001174"
     CDS             5993..6592
                     /locus_tag="RJ239_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HDV7331296.1"
                     /translation="MEKILKILLFLPILALSTKAEWVVKSYQEIKNERVIRQTYEQSC
                     GASSLATLLNILDDQKKFDELELLKIMSGQELYTDMVSFADLNDAVKKLDFQSNSYQI
                     NRENLDKLVNIPMLVKIEDDPRFPHFVIIINHEGNYLQVLDPSHGEYISSKSQFFSIW
                     DRYNKGGYALIVAPKKELKPFKLNTPKSLHFDFSPFSLF"
     gene            complement(6641..7483)
                     /gene="fliY"
                     /locus_tag="RJ239_001175"
     CDS             complement(6641..7483)
                     /gene="fliY"
                     /locus_tag="RJ239_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliY"
                     /protein_id="HDV7331297.1"
                     /translation="MINDFLKMFTNECISTIEGLTGKSAEFSEYKEFDVNTSDTLKAP
                     LVYAIFNIANGGKIGILAGAVLMSAIGEWMMGEEEITKNDKLGPDEMDAAKEAIQNII
                     SAFSTTLGAQKDIPKMDFSIESCEFVPESVDFKDFKKLFLYDVKIGDLEEQVSLAMDQ
                     TLHNILSGKPAETGNTSTDSNHNTEEKAIMLSEELKNINLIMDVRLPVRVRIGNKKML
                     LKDVLTMDIGSVVELNQLANDPLEILIGDKRIAYGEVVIVDGNFGVQITEIGSKKERL
                     EQLR"
     gene            complement(7480..8559)
                     /gene="fliM"
                     /locus_tag="RJ239_001176"
     CDS             complement(7480..8559)
                     /gene="fliM"
                     /locus_tag="RJ239_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HDV7331298.1"
                     /translation="MAEILSQEEIDALLEVVDDNTDTPIASNSKDEKDERNIVVYDFK
                     RPNRVSKEQLRTIKGIHDKLARNLASQISSMMRSIVETKLHSVDQMTYGEFLMSLPSP
                     TSFNVFSIKPLDGNCVLEINPSIAFPMIDRLLGGQGDSYEASRELTDIELNLLDSILR
                     IIMQRLKESWATVTEIYPSIEAKESSPNVVQIVSQNEIVIMVVMEIIIGNSSGMVNIC
                     YPVVHLESILSRLANRDIMMGETSAKKSRNKELKTLIGRAEVVYEAILGKTLINVHEF
                     LELKQGDILRLDREADDKAIVSIDKKDVFLAQIGLHRFRKSIKILELIRTDKDEIKEI
                     LEKYEEERKAKASVYDEPEEEDEEI"
     gene            complement(8559..9251)
                     /locus_tag="RJ239_001177"
     CDS             complement(8559..9251)
                     /locus_tag="RJ239_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor FliA"
                     /protein_id="HDV7331299.1"
                     /translation="MLKEPPKAYAQMLKKEQDELVLSYMPALRAMAFRLKERLPSSID
                     VNDLISIGVEEMIKLSRRYDKEQNDNFWGFARKRVNGSMLDYLRSLDVMSRNNRKIIK
                     DIDAIMDEYFLEHECEPDDEYLAKKLDLDVEKIKEVRTAHAISYTLPIDEQIELYNED
                     NTLEKIEKEELLEKIHEVLDDLKERDQLIIQLYYYEELSLKEISEILQISESRISQIH
                     KKLLKKLRERLV"
     gene            complement(9232..9588)
                     /locus_tag="RJ239_001178"
     CDS             complement(9232..9588)
                     /locus_tag="RJ239_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331300.1"
                     /translation="MRPENYVAFFTVCGFFIGLAFSIISIDEAFDILIFTCFITFMFY
                     VFVHIAIMNFIDVKKISGRIFNKHDYEKTSNNIINDLVIREKKMDIILEKLNEEREEL
                     KKNEFKERRRNAKRAA"
     gene            complement(9607..10473)
                     /gene="flhG"
                     /locus_tag="RJ239_001179"
     CDS             complement(9607..10473)
                     /gene="flhG"
                     /locus_tag="RJ239_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis ATPase FlhG"
                     /protein_id="HDV7331301.1"
                     /translation="MNNQANKLRNLMSQNGTKKSQNTHFIAITSGKGGVGKSTISANL
                     ANVLANNGYKVGLFDADIGLANLDVILNVRIQKNLLHVLRGECSLEDILIEVKPNLWL
                     IPGESGDEILKYNDKNIYERFLNQASILDELDFLIIDTGAGIGGNILNFLEMADEVIV
                     VTVPDPAAITDAYATIKTTSKTKENLLMLFNVVKNENEALKVFENIKKVADANIKNPL
                     NLEFLGHLSASKDVSGSIKKRTLFSDENTASSDEIKALASKLLYRLERKVLDNVSNRS
                     FSSFFRKIIERF"
     gene            complement(10466..11920)
                     /gene="flhF"
                     /locus_tag="RJ239_001180"
     CDS             complement(10466..11920)
                     /gene="flhF"
                     /locus_tag="RJ239_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhF"
                     /protein_id="HDV7331302.1"
                     /translation="MGQLIHTFTVEDTEQIIPKVKEDYGDKALIITNKQIRPKTLNRS
                     ALYEVMVAIEESDYEEHLKKQGKSLPAKKSSPKPSSTSLAEEKIRSQIPQEDEDVVLD
                     FSNTRLNTNLNTVKNNDLAKKTYQDFPQNKINPHQNKTLGFDDFKEKLSEVSNEISKV
                     TNTPLENYTPNPNYNKKIENFEKQFEKQINKLNDKIDLLADMMWDDKAEARKNLMIPP
                     EFASIYKQAKESGMLENHLEAIMKATIENMPAAMKTNKDAVQRYFHSLLRNILPCRVE
                     SDIKKQKIMMLVGPTGVGKTTTLAKLAFRYAYGDKRYKTGIITLDTYRIGAVEQLFQY
                     AKMMKLPIIDSIEPKDLDEAIKSLNNCEVILVDTIGNSQYDQSKLAKTKEFLMHSNAE
                     IDVNLVVSANTKHEDLMEIYKNFSFLNIDTLIITKFDETKVFGNIFSLVYETNIPLSF
                     FSIGQEVPDDLEVANSDFLVHCILEGFNKGKNNE"
     gene            complement(11930..12403)
                     /gene="folK"
                     /locus_tag="RJ239_001181"
     CDS             complement(11930..12403)
                     /gene="folK"
                     /locus_tag="RJ239_001181"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HDV7331303.1"
                     /translation="MLKIQGVKHFEKSRFFPFFSQNIRSFKYLALIGLGSNIEPEKKR
                     FDMLFRVMMDDKRFKILSTSPMLINEAFGFKEQKDFTNAVMLIQTNLHARALLKVLLY
                     YEVKFKRKRTFKNAPRTLDLDLLYFSQKVKRDKWCEVPHKGAKERVSVILPLGMI"
     gene            complement(12406..12885)
                     /gene="aroQ"
                     /locus_tag="RJ239_001182"
     CDS             complement(12406..12885)
                     /gene="aroQ"
                     /locus_tag="RJ239_001182"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HDV7331304.1"
                     /translation="MKIMIIQGPNVNMLGVREVGIYGAMKMEEIHEQMKLAASQNNVE
                     LDFFQSNFEGEIVDKIQECLGTVDGIIINAAGYTHTSVAIRDAIAAVALPTIEVHISN
                     VYRREEFRQKSLIAPVCSGTIVGFGPFGYHLALMGIIQICEQIKNLRAMQQAQQTNK"
     gene            12976..14205
                     /locus_tag="RJ239_001183"
     CDS             12976..14205
                     /locus_tag="RJ239_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDV7331305.1"
                     /translation="MFIVAARYLFLCDEDFTILENQAFVFEDKILELGELDNLKKKYP
                     KAKIIKTPKNSVILPAFINPHTHLEFSANSTTLHFGEFLIWLKSVINSRSILNAQAKE
                     ELILQSIKKMQKSGIGTIGEISSFGSDLDPCLKASHKGMRIVFFNEILGTNENQVEDK
                     KQEFLKRFENSLKFKNDFFIPAISIHSPYSTHPSLAHFALDLAKKQNLLASTHFLESK
                     AENIWLRESKGGFKKWLENFTLHPKPLYTPKDFVKLFKGVRTLFTHCVYLKEYEWLDK
                     NLHSITHCAFSNRLLSQKSLDLKTALKSGLNIHLGTDGLSSNISLSLLDEMRANLLIH
                     KNFDLLELASKLLQMVTLYPARALNLNLGELKKGKIADFNVFELGECDKKQAPLQFIL
                     NAKEVDKLFIKGKECKF"
     gene            14193..15089
                     /gene="sppA"
                     /locus_tag="RJ239_001184"
     CDS             14193..15089
                     /gene="sppA"
                     /locus_tag="RJ239_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HDV7331306.1"
                     /translation="MQILKSFFKALGCGIKFINTYFKTFVLLLIVIWILIPSANSSSN
                     LANLERIDLKGEIFDSSAVLEKIINAKNDSNIKGVLFVIDSPGGAFAPSMELALAIKD
                     LKIKKPVLVYASGTMASGSYLAGVGANKILANPASFIGSIGVIMQGADLSGLANKLGI
                     KEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQSYDLFTGFVAKERALDLNKKDQWA
                     NARVFLAAKAKELGLIDELSNYENAKKELEKLANVSNPVWKEEDKIDKFLNRLEGQTS
                     SLISKSLIEIAYKTNSSFINAR"
     gene            15168..16199
                     /locus_tag="RJ239_001185"
     CDS             15168..16199
                     /locus_tag="RJ239_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj0069 family protein"
                     /protein_id="HDV7331307.1"
                     /translation="MKKNIVFFEVKGGSDKGEDGYRKDTMPMVNALKAKGWNAEVIFF
                     EVGKKDEIYKYVKENFDGYVSRINPGNLKEENEYFDMLRKLCADKLVGMPHPDAMIGY
                     GAKDALTKLADTDLVPSDTYAYYDIKTFKENFPKSLAKGERVLKQNRGSTGEGIWRVS
                     VEGNVSGDSLPLNTKIKCTEAKDNHVEHRELGEFMDFCEQYIIGDNGMLVDMTFLPRI
                     KEGEIRLLMLYNTPVNVVHKKPAEDADAFSATLFSGAKYRYDKPEDWKTLVDMFLGEL
                     PKVREKLGNYDLPLIWTADFILDTDEKGNDKYVLGEINCSCVGFTSHLELADEVASNI
                     INIVSKTKA"
     gene            complement(16441..16791)
                     /locus_tag="RJ239_001186"
     CDS             complement(16441..16791)
                     /locus_tag="RJ239_001186"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331308.1"
                     /translation="MSYLIQNIKTTNDLKEKLYTVSKKWLLEHILYKDVKVEQYRRSS
                     LTSEDDGEVSFEEVKEEKDDENTVYLYTCECVEQMHDVPFGIHQKIQLKGVKFKCKKC
                     KEAIQFYKKYSENF"
     gene            complement(16767..>17055)
                     /locus_tag="RJ239_001187"
     CDS             complement(16767..>17055)
                     /locus_tag="RJ239_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002871941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HDV7331309.1"
                     /translation="DKLIPTWNEKYSIHDTMIDIQHQKLCELASKVESAVYKFVKREE
                     LKEILTELFNYMKEHFSNEEDYMQEIHYPYLNEHKIMHKISFVICLILYKT"
BASE COUNT         5386 a         2692 c         2595 g         6382 t
ORIGIN      
        1 ttagttaact agaatttaag cattgtaaat tacattacca atatcaaagg ataaacaatg
       61 gatagaaaga aaattccctt gttggtgctg tgtattttaa ttgcagctgt gttttggctt
      121 gtacctactc ctgtaggttt ggaagataat tcttggcatt ttcttgggct ttttattgct
      181 gtgattatgg cagtgatttt acaagtaatg ccttttatag ctattgccat agtagctctt
      241 agtgggtatt accactaccc aattgaaaat ctaagtaaaa tttacaccaa agctacttcg
      301 aaaacttcta cgcaacaact tattgatgag actaaaattt cctttaaata cttcagcact
      361 tgatttttta tatcaaaaga gcataagatg aaaaggtaaa tactgctata tcaaatttaa
      421 aatctaaaac gggcataaaa gatgctttaa gtggtttttc aaattctctt atttggttta
      481 tagtgatttc tattattgtg gctcgtggag ttattaaaac aggacttgga gagcatttgg
      541 cttatcattt tatcagtatt cttggtaaaa aaaccttagg tattgcttat tctatagctt
      601 tttgtgaaac tattttagct ccagttactc cttcaaatac tgcaagagca ggggctatca
      661 taaatcctat agttcaagtt attgcaagaa gttttaaatc cactcctgaa gatggaacac
      721 aaaataaaat aggcacttat ctttctttgg taaattatca agagccaatc ctatttcatc
      781 agctatgttt attacagcta cagctccaaa tcctttggtg gttgatctta tagcacaagc
      841 tacaaattta gaagtgtatt taacttgggg gtaataggct ttagggatgt ttttacctgg
      901 tatagctgct atgcttttga tgcctttgat gctttatttt ctctctccgc tagaaattaa
      961 atccacgcct aatgcttcta cttttgctaa agataaatta aaagaacttg taaaaatgaa
     1021 aaatagtgaa aaaatcatac tcagtgtttt tgtctcgctt ttacttttat gggctggagc
     1081 tttgggcttg tttttttgga atttctcttg atgcgactag tgtggctttg cttgggttgt
     1141 ctttggtgtt gattagtgga gttttaactt ttggggaagt tttggctgaa aaagctgctt
     1201 ggaatacttt agtatggttt tcagctcttg taatgatggc aactttattt ggcaaacttg
     1261 gcgttacaca gtttttagct gaagcttaag gtgaatttgc ttctgctatg ggacttgggg
     1321 aaatttctat tatgatattt ttaagccttg ctttttttat atacacacta tttctttgct
     1381 tccattacag ctcatatatc agcaatgttt tttgtttttt atagtgcagc ttgccttagg
     1441 agcaccacca cttttttatg cttttattat gatagcttca ggtaatgtta tgatggcatt
     1501 aactcactat gcaataggaa cagctcctgt tatttttgga acaggctgtg taactcttaa
     1561 aaaatggtgg agtataggtt ttgtgatttc catagttgat atagtggtga tgatagctgt
     1621 tgggcttttt tggtggaaaa ttttaggatt ttattaataa tttctaggaa ttaattccta
     1681 gaaattattc tataaaacca cttgctatga ctttatcatg atcataaaag actgccattt
     1741 gtccgctagc aagcccataa acaggatctt ttaggatgat ttttgcactt ttatcttcat
     1801 aaatttctac cttgcaaggt gtggattttg aacgatagcg gatttttact tcgcaatcaa
     1861 gctctttagc gtctataaaa agattgatat tttttaggtt aaattcactg attttaagtt
     1921 cttctttggt tcctacgatg atttggtttt gcttaggatt gatttttaaa acaaaatgcg
     1981 gctcatgcgc tccacgcact tcaaagcctc ttcttttgcc tatggtatag tgcatatagc
     2041 cctcatgttt gcctactact tttccgctac tatctaatac ttctccagga atttttgtat
     2101 ccataaactg atctaaaact tgcacataag tatcttcaac aaagcaaatt tcagaacttt
     2161 ccttttgggt ggcaaaagat tttaaaacct ctatagtgga agcaaatttt ttcacatctt
     2221 cttttttcat ttcgcctagc ggaaaaataa gatattttaa agcttcttta tctgcactgg
     2281 ccaaaaaata gctttgatcc ttgctttcat ctactgcggt ttttattaag ttgttttcaa
     2341 gtcttgcata atgccctgtg gcaagttttt cacaacctaa acttttagca aattctaaaa
     2401 gttttccaag tttgataaaa cggttacata aagcgcaagg atttggtgtt ttaccctctt
     2461 tataagtatc cacaaaaggc atgtaaactt tgtttttaaa atcttcttgt aagtctaaaa
     2521 tatgataagg aatttgcaaa aagtttgcaa ctttttctac ttttttgata ttttcttcgt
     2581 gataatttgg tttgccatga agtttcatat aacaacctat aacttcatga cctaaatttt
     2641 taagtttata agcagtgact gtactatcaa ctccaccgct catagcgact agaattttca
     2701 ttaaatttcc tttaaagtat taattataaa atccaagtcg tcagtgattt tatactttaa
     2761 ctcatctcct ttagaaatca cttcaagttt gagtaaagaa tttctgacga actcatcaaa
     2821 acctcgccaa aattcactcc caaacaaaat aataggaaca tcttttttaa attctaattg
     2881 ttttaatgta agaatttcac acaattcatc aagtgttcca aagccgcctg ggaagatcac
     2941 aaaagctaga ctcttttcaa taagagccat tttgcgtatg gctaagctct caaaagtaat
     3001 attatattct acaaaatcat taagtttttg ctcgtgaggt aaaaatatat taaaccctac
     3061 agaactcatt gaatttgtat tatttttttg tgaaaaagca ccttcgttgg ctgcacgcat
     3121 aataccacca cctccaccac ttatcacaca aaaaccattt tgagcacatt tttgtgccaa
     3181 aattttagcc tgctgataat aaaaattatc ttctttaagt cttgctgaac caaaaaaagt
     3241 tacggcattt tttaggtttg gtatgttagc aaatttttct aaatcttggc ttattttttc
     3301 attcattttt caacctttag ttaaaataaa ttccattcta gctaaaaatt tataataagt
     3361 tctttattat ataagtttta ataggtttat tttattaaga ttaggaattt aaagactttt
     3421 aaatccttaa gctttaatat ctatactttt tggtgtagaa tttaaagaaa ggattttatt
     3481 aaattctcct gcatcatcat cactaaattt cataccaaaa agaagttcta attctttact
     3541 agtgctaaat ttaccttcta atagtttttt tacaagttcg tttcttgtgc tatcatcttt
     3601 gtaagtttct ttgtttttac tttcgccttg aatggctttg aagggttttt cactttgttg
     3661 agtgataatt tcatcatcac tagaaagcaa cattttatca cccatagcca tttcgtattc
     3721 tttcacaaat tcatcgtgtc tttgcttaaa atctatgtat ttagttttaa actcatttaa
     3781 gcttaaatct ttacttataa gtgcgtcaaa ttctttataa aattcatcgg cttttttgat
     3841 gatgtcgtag cccaaatgaa acatcttaga ataagaaaca aaaaaaccta acatcatttt
     3901 ctccgtagtt gggtcccatt ttgtataagc aggattaaaa tcttttaaag gggatttttc
     3961 tattttattg gggtctttta aagcatttga cttcataaag ttgttaaatt cttgcatatc
     4021 ttttttgcta atactttcat caagtccgaa tattttagga ttatactcaa atttttttcc
     4081 acgataaggc aaagcacctt ctcctgttat aacggctact ccgtgtttgt tgattttaaa
     4141 atcaatattt ttatcttgtt taaaatttga agtgttataa tcatagttta aatttgagtt
     4201 tagactattt atcattagtt tttcctcttt acttgataga atacccacca agatatcttt
     4261 ctaaaaagtc tttatagttt gaactgattt ccttaactac tctgtaatta ttcaaaacag
     4321 gacttgattt tactctatac caagaacctg attgttcgtt gattacagcc actccataag
     4381 aaaaatacac aaatcttttt cctaaattag aaataccaat atttcttttc acagtatatc
     4441 caagaaagtt acgataaggg tcatcgccca ctatactcat agtttcccaa agtctttttt
     4501 gattgatata ggaatgctta ccattaacca aacaatttgt agtttctata ccgcacattc
     4561 caccaaatcg aacaagtcct tctctattcc aataatattg atctccgtta ctatcttgaa
     4621 ataaagttaa ttccaaattc caatcaggtt tggcaaaggc tataacttca ttatcactaa
     4681 gtcgttttaa ataggttata tacccaccct tcacttcttt catctcttca aggctgagtt
     4741 ctttgacacc cgggcttgta tcgcttaagg caccttttgt gagtttagct aaaaaatcct
     4801 cagcaaaaac agaactagtc agtaaagaag ttaaagctaa taaagcaaaa atctttttta
     4861 ttgaaaatcc tttcataaat tctttttgta agttctttaa aactactatc gacttattct
     4921 agcaaaagtt taatcttgct ttgaaagtta agtgaatttt ctttaaatac ttaaaatttt
     4981 attctcggtt tgtttgcttt tgtaataaat tttcattttt atcttaaatt atattaagca
     5041 agtaaaaata tttaaagatt ttaaaatact ttatttagaa taataaactt ttcaatatca
     5101 aggattaaat tttaaaatta acttgagctg attatttaaa atgtaaggat tgacaatgaa
     5161 aaaaattttc ttaacattta tggttttagt taattgtgtt tttgctagcg atgaactaaa
     5221 tatagacagt ttatttaaaa agcaaatagg cttaagaagc attgcaagct tttctttact
     5281 tagcacagga aacgcaaact cgtattctct ttatcctaat ataacaatag gcggagatcc
     5341 tacaatttgg aatgatacaa agcaagtgtt tttaactcaa actttcattt ataccctaac
     5401 acctaagttt gacatactta tttcaggggg tggaagctat gcaagacaag aatatacaaa
     5461 ttttttcaca aatgcatatt cccataaaga tcgcatagga tttgataatc tatggctagg
     5521 ttttatttat acaggcgata gcattgcaga tttaattcca caaattacct ttcaaactgc
     5581 agttgttcaa agagaaaaag caatcaatca aaccaaaaac ttttatctga aatcacaaag
     5641 cttacaagct agtttgaggg gatatagcga tcctgtttta tagtatttat acaggatttg
     5701 gttataatca atcaagaaaa tttaaaaccc ttaaaataga gtatggaaat agtatttatg
     5761 tgggtgggga tttatctatt attctaagtc ctaaaattac tttagattta ggagcagagc
     5821 aaagatttca aatgaaacaa aaaatcaatg gctatcaaaa ttctgaagtg cgttctattc
     5881 caactttaag tttaggttct acttatagca ttaattcaga taccgcagtt tctgttaatg
     5941 ctagttttgg aggaagctct gcttctcctg atagcatatt tgggataagc ttatggaaaa
     6001 aattctaaaa attttattat ttttacccat tcttgctttg agtacaaaag ccgaatgggt
     6061 agttaagtct tatcaagaaa ttaaaaacga aagagtaata agacaaactt atgagcaatc
     6121 ttgtggtgct tcatctttag caactttact taatatactt gatgatcaaa aaaagtttga
     6181 tgaacttgaa cttttaaaga ttatgagcgg acaagaactt tatacggata tggtaagctt
     6241 tgcagattta aacgatgcag ttaaaaaact agactttcaa agcaattcat atcaaatcaa
     6301 tagagaaaac ttggataaac ttgtaaatat tccaatgctt gtaaaaattg aagatgatcc
     6361 acgctttcca cattttgtta taattatcaa tcatgaaggt aattatttac aagtgcttga
     6421 tccaagtcat ggagaatata taagttctaa aagtcaattt tttagtattt gggatagata
     6481 taataaaggt ggttatgctt taattgttgc tcctaaaaaa gagctaaaac cttttaagtt
     6541 aaacactcca aaatctttac attttgattt cagccctttt agtttgtttt agttttaatt
     6601 cgtttatatt tattattctt aatttgtagg ctaaaacttt ttatcttagt tgttctaatc
     6661 tttctttttt agaaccaatt tctgtaattt gaacgccgaa gttaccatcg acaattacta
     6721 cctcgccata agcaattctt ttatccccaa ttaaaatttc aagcggatcg tttgcaagtt
     6781 gattaagctc cacaactgag cctatatcca tagttaaaac atcttttaaa agcatttttt
     6841 tattgcctat acgcacacga acaggcaaac gcacatccat gataagattg atatttttaa
     6901 gctcttcgct aagcattatc gctttttctt cagtattgtg attagaatca gtgcttgtat
     6961 ttcctgtttc agcaggtttc ccgcttagga tgttatggag tgtttgatcc atggctaaag
     7021 aaacttgttc ttctaaatcg cctattttta catcatataa aaataatttt ttaaaatctt
     7081 taaaatctac gctttcaggc acaaattcac aagattctat gctaaaatcc atttttggaa
     7141 tgtctttttg ggctcctaag gttgtagaaa atgctgaaat gatattttgg atggcttctt
     7201 tagctgcatc catttcatca ggacctagtt tatcgttttt ggtgatctct tcttcaccca
     7261 tcatccattc accaatagca ctcattaaaa cagcaccagc taaaattcct atttttccac
     7321 catttgctat attaaatata gcatacacta aaggtgcttt taaagtatcg cttgtattga
     7381 catcaaattc tttatattcg ctaaattcag cactttttcc tgttaaacct tcaatggtgc
     7441 tgatgcattc atttgtaaac atttttaaaa aatcattgat catatttctt catcctcctc
     7501 ttcaggctca tcataaacac tggctttagc tttacgctct tcttcgtatt tttccaaaat
     7561 ttctttgatt tcatctttat ctgtgcgtat aagttctaaa attttaatag attttctaaa
     7621 acgatgcaat ccaatttgtg ctaagaaaac atctttttta tcgatactta ctatagcttt
     7681 atcgtctgct tctctatcaa gccttaaaat atcgccttgt ttaagttcta aaaattcatg
     7741 aacattaatt aaggtttttc ctaaaattgc ctcatatacc acttcagcac gaccgattaa
     7801 agttttaagc tctttgttac gtgatttttt ggctgaggtt tcacccatca taatatcacg
     7861 gtttgctaaa cggcttaata tactttctaa atgtactaca ggatagcaga tatttaccat
     7921 tccgcttgaa tttcctatga tgatttccat tactaccatg ataacaatct cattttgaga
     7981 tacgatttgc acaacatttg gacttgattc tttagcttct atactaggat aaatttcagt
     8041 tacggtagcc cagctttctt taagtctttg cataatgata cgcaaaatag aatcaagtaa
     8101 attaagctca atatccgtaa gctcacgcga agcttcatag ctatcgcctt gaccacctaa
     8161 aagcctgtct atcataggaa aagctatgct tggattgatt tctaaaacac agtttccatc
     8221 taaaggtttg atagaaaaaa cattaaaact tgttgggctt ggcaaagaca ttaaaaactc
     8281 tccataagtc atctgatcga ctgaatgaag tttagtttca acaatacttc tcatcatcga
     8341 tgaaatttga gaggctaaat ttcttgctaa tttatcatgt atgcctttaa tcgtcctaag
     8401 ttgttctttt gaaactctgt tgggacgctt aaaatcatat acaacgatat ttctttcatc
     8461 tttttcatct tttgaatttg aggctatggg tgtgtcggtg ttatcatcga caacttcaag
     8521 tagagcatca atttcttctt gggagagtat ctcagccatt acactagcct ttctctaagt
     8581 tttttaagaa gttttttgtg aatttgtgaa attctgcttt cactgatttg taaaatttca
     8641 ctgatttctt ttaggcttaa ttcttcataa taataaagct gaataattaa ctgatcgcgc
     8701 tctttaagat catctagcac ttcgtgaatt ttttctaaaa gttcttcttt ttcaattttt
     8761 tctaaagtat tgtcttcatt ataaagttcg atttgctcat caatgggcag ggtatagcta
     8821 atagcatgag ctgttcttac ttctttgatt ttttctacat ctaaatcaag ttttttggct
     8881 agatactcat catcaggttc gcattcatgt tctaaaaaat attcatccat gattgcatca
     8941 atatctttaa taattttacg attatttcga ctcattacat caagacttct aagataatca
     9001 agcatagagc cgttaactct ttttcttgca aaaccccaga agttatcatt ttgttcttta
     9061 tcgtaacggc gtgaaagctt tatcatttct tcaacgccta tgctaataag atcattaaca
     9121 tctatacttg aaggcaagcg ttcttttagt ctaaaagcca tagcacgcag agctggcatg
     9181 taagaaagca caagctcatc ttgctctttc tttagcattt gtgcataagc tttaggcggc
     9241 tcttttagca tttcttcgtc tttctttgaa ttcatttttc tttagctctt ctctttcttc
     9301 attgagcttt tctaaaatta tatccatttt cttttcacga ataactaaat cgttgataat
     9361 attattgcta gttttttcat aatcgtgttt attaaagatt ctgccactaa ttttctttac
     9421 atctataaaa ttcataatag caatatgaac aaaaacataa aacataaaag taataaaaca
     9481 agtaaaaatc agtatatcaa aggcttcatc tatactaata atgctaaatg caagtcctat
     9541 aaaaaatcca caaacagtga aaaatgctac gtaattttct ggcctcataa tctcttctct
     9601 ttattgctaa aatctttcaa taatttttct aaaaaaactt gaaaaactac gatttgaaac
     9661 attatcaagc actttccgtt ccaatctata taaaagcttg gaagctaggg ctttaatctc
     9721 atcacttgag gctgtgtttt catcgctaaa taaagttctt tttttaatac taccacttac
     9781 atctttagaa gcgcttaaat gacctaagaa ttctaaattt aaaggatttt taatgtttgc
     9841 atctgcaact tttttaatat tttcaaaaac ttttaaagct tcattttcat tttttacaac
     9901 attaaagagc attagtaaat tttcttttgt cttagaagtt gtttttatgg ttgcatacgc
     9961 atcagtgatt gctgcaggat caggaacagt tactactata acttcatcag ccatttctaa
    10021 aaaatttaaa atatttccac caatacccgc gcctgtgtcg ataataagaa aatcaagttc
    10081 atctaaaata cttgcttgat ttaaaaatct ctcgtaaata tttttatcat tatattttaa
    10141 aatctcatct ccactttcgc ctgggatgag ccataaattt ggcttaactt ctattaaaat
    10201 gtcttccaag gagcattctc cgcgtaaaac atgcaagaga tttttttgta tgcgtacatt
    10261 taaaatgaca tccaaatttg ccaagccaat atcagcatca aaaagcccaa ctttatagcc
    10321 attatttgct aaaacattgg ctagattcgc gctaatcgta ctttttccaa cgccaccttt
    10381 tccacttgta atagctataa aatgagtgtt ttgggatttt ttggttccat tttgactcat
    10441 gagattgcga agtttatttg cttggttatt cattattttt tcctttgtta aacccttcta
    10501 aaatacaatg aactagaaaa tcactattgg ctacttctaa atcatctggc acttcttgtc
    10561 ctatagagaa aaagcttaga ggaatatttg tttcataaac aagagagaag atatttccaa
    10621 aaacctttgt ttcatcaaat ttagtaataa tcaaagtatc aatatttaag aatgaaaaat
    10681 ttttataaat ttccattaaa tcttcatgtt tggtgtttgc agaaaccact aaatttacat
    10741 caatttctgc atttgagtgc attaaaaatt ctttagtttt agcaagtttg ctttgatcgt
    10801 attgtgaatt tcctatagta tcaactaaaa ttacttcgca attatttaag ctttttatcg
    10861 cttcatctaa atcctttggt tctatgctat caataatagg aagtttcatc atttttgcat
    10921 actgaaaaag ttgctcaact gcaccgattc tataagtatc aagcgtaata atacctgttt
    10981 tataacgctt atctccataa gcatagcgaa aagctaactt agctaaggtt gttgtttttc
    11041 cgactcctgt tgggcctact agcatcatga ttttttgttt ttttatatcg ctttcaacac
    11101 gacaaggcaa gatatttctt aaaagtgagt gaaaatatct ttgaaccgca tctttgttgg
    11161 ttttcatagc agctggcata ttttctatag ttgctttcat aatcgcttct agatgatttt
    11221 caagcattcc actttctttg gcttgtttat aaatacttgc aaattcagga ggtatcataa
    11281 gattttttct agcttcagct ttatcgtccc acatcatatc tgcaagaaga tctattttat
    11341 cattaagctt gttgatttgt ttttcaaatt gcttttcaaa attttctatt tttttattat
    11401 aatttggatt aggggtgtaa ttttctaaag gtgtgtttgt gactttagaa atttcattgc
    11461 taacttcact tagtttttct ttgaaatcat caaagcctag agtcttattt tgatgagggt
    11521 tgattttgtt ttgtggaaaa tcttgatagg tttttttagc taagtcattg ttttttacag
    11581 tgtttaaatt tgtatttaag cgagtgtttg agaaatccaa gactacatct tcatcttctt
    11641 gagggatttg agatctaatt ttttcttctg caagagaggt agaggatggt tttggcgagc
    11701 ttttttttgc aggtaaagat tttccttgtt tttttaagtg ttcttcatag tcgctttctt
    11761 ctatggctac cataacctca taaagcgcac tgcgatttaa ggttttagga cgaatttgtt
    11821 tatttgttat aattaaagct ttatctccgt aatcttcttt tactttgggt ataatttgtt
    11881 ctgtatcttc aacggtaaaa gtatgtataa gttgtcccat ttatattcct tatatcatgc
    11941 ctaaaggcaa aattacactc actctttctt tagccccttt atgaggcacc tcacaccact
    12001 tatcacgctt gactttttgt gaaaagtata aaagatctaa atcaagcgtt ctaggagcgt
    12061 ttttgaaagt tctcttgcgt ttaaatttta cttcatagta aagtaaaact ttcaaaagtg
    12121 ctcgtgcatg caaattagtt tgtatcaaca taacagcatt ggtaaaatct ttttgctctt
    12181 taaaaccaaa ggcttcattt atcaacatag gagatgtgga taaaatttta aatcttttat
    12241 catccatcat tactcgaaaa agcatatcaa atcttttttt ttcgggttct atattgcttc
    12301 ctaagcctat aagagctaaa tatttaaaag atcgtatatt ttgactaaaa aaaggaaaaa
    12361 aacgactttt ttcaaagtgt tttactcctt gaatttttag cattattatt tattcgtttg
    12421 ttgtgcttgt tgcattgcgc gcaaattttt tatttgttcg caaatttgaa ttatacccat
    12481 taaagccaag tgatagccaa aaggaccaaa accaacaata gttccagaac atacaggcgc
    12541 tataagactt ttttgacgaa attcttctct gcgataaaca ttgctaatat gtacttcaat
    12601 tgtaggcaaa gctactgctg caatagcatc gcgaatagct actgaagtat gagtatagcc
    12661 tgctgcattg ataataattc catcaactgt tccaaggcat tcttgaattt tatctacgat
    12721 ttcaccttca aaattacttt ggaaaaagtc aagttctaca ttgttttgcg atgctgcaag
    12781 tttcatttgc tcatgaattt cttccatttt catagcacca taaattccca cttctcttac
    12841 gccaagcata ttaacatttg ggccttggat aatcattatt ttcatggatt taaccttaaa
    12901 aatttatttt taacctttta ttataacatt ttaaaaataa atttttgcta caatgtaatt
    12961 tttgaaagga aaatcgtgtt tatagttgct gcaagatatc tttttttatg cgatgaagat
    13021 tttacaatac tagaaaatca agcctttgtt tttgaagata aaattttaga attgggtgaa
    13081 ttggataatt taaaaaaaaa atatcctaag gctaaaatca tcaaaacacc taaaaattcg
    13141 gttattttac ctgcttttat aaatcctcac acacatttag aatttagtgc aaattcaaca
    13201 actttacatt ttggagaatt tttaatttgg cttaaaagtg ttataaattc tcgttccata
    13261 ttaaatgcac aggccaaaga agaattaata cttcaaagca ttaaaaaaat gcaaaaaagt
    13321 ggtataggca ctataggtga aatttcaagt tttgggagtg atttagatcc ttgcttaaag
    13381 gctagtcaca agggtatgcg tatagtattt tttaatgaaa ttttgggtac aaatgaaaat
    13441 caagttgaag ataaaaaaca agaattttta aaaagatttg aaaattcttt gaaatttaaa
    13501 aatgattttt ttatcccggc aatttcgatt cattctcctt attcaactca tcctagtttg
    13561 gctcattttg ctcttgattt agctaaaaag caaaatttac tagctagtac gcatttttta
    13621 gaaagtaagg ctgaaaatat ctggcttaga gagtctaaag ggggttttaa aaaatggctt
    13681 gaaaatttca cacttcatcc taagcctctt tatacaccaa aggattttgt taaacttttt
    13741 aaaggagtaa ggactctttt tacgcattgt gtttatctaa aagaatatga atggttagat
    13801 aaaaatttac attctattac acattgtgca ttttcaaatc gccttttaag tcaaaaaagc
    13861 ttagatttaa aaacggcttt aaaaagtgga ttaaatatcc atttaggaac cgatggactt
    13921 agctcaaata tttcattgtc tttacttgat gaaatgcgcg cgaatttgct tatacataag
    13981 aattttgatt tattagagtt agcctctaag cttttgcaaa tggtaacact ttatcctgca
    14041 agggctttaa atttaaattt aggagagctt aaaaaaggta aaattgctga ttttaacgta
    14101 tttgagctag gagaatgtga taaaaagcaa gctcctttgc agtttatttt aaatgctaag
    14161 gaagtggata aattatttat aaaaggaaaa gaatgcaaat tttaaaatca ttttttaagg
    14221 ctttaggatg cggtataaaa tttatcaata cttattttaa aacctttgtt ttattgttga
    14281 ttgttatatg gattttaata cctagtgcaa attcaagctc taatcttgca aatttagaac
    14341 gcattgattt aaagggtgaa atttttgaca gctctgcggt tttggaaaaa attatcaatg
    14401 ctaaaaatga tagcaatatc aaaggagtgc tttttgttat agactctcct ggtggagctt
    14461 ttgctcctag catggaacta gctctagcta taaaggattt aaaaattaaa aagcctgtgc
    14521 ttgtttatgc aagcggaact atggcaagtg gaagttattt agcaggagtt ggagcaaata
    14581 aaattttagc caatccggca agttttatag gctctatcgg tgtgattatg caaggagctg
    14641 atttaagcgg attggctaat aaactcggta ttaaagaaca aactattcaa gcgggtgaat
    14701 ttaaaagtgc tggaactttt gcaagagctt ggaatgagaa tgaaagaaat tttttacagg
    14761 gtttaattga tcaaagttat gatcttttta caggttttgt tgccaaggaa agagcattag
    14821 atcttaacaa aaaagatcaa tgggcaaatg caagagtgtt tttagctgcc aaggctaagg
    14881 agcttggtct tatagatgag cttagtaatt atgaaaatgc taaaaaggag cttgaaaaac
    14941 ttgctaatgt ttcaaatcct gtttggaaag aagaagataa gattgataaa tttcttaacc
    15001 gcctagaagg acaaacatca agcttgataa gtaaaagctt aatcgaaatc gcttataaaa
    15061 ctaatagcag ttttataaac gctagataaa atatataaat atttttattt aatttttgta
    15121 atatttttat gcaataatta tttatatctt agataaggag taaaataatg aaaaaaaata
    15181 ttgttttttt cgaagttaaa ggtgggagtg ataaaggtga agatggctat agaaaagata
    15241 ccatgcctat ggtaaatgcc ttaaaagcta agggttggaa tgctgaggtg attttttttg
    15301 aagtgggtaa aaaagatgaa atttacaaat atgtgaaaga aaattttgat ggttatgttt
    15361 ctcgcatcaa tcctggcaat cttaaagaag aaaatgagta ttttgatatg ttaagaaaac
    15421 tttgtgccga taagcttgta ggtatgcctc atcctgatgc tatgataggt tatggtgcta
    15481 aagatgcact tacaaaatta gcagatactg atcttgttcc aagcgatact tatgcttact
    15541 atgatattaa gacttttaaa gaaaattttc caaaaagttt ggctaaaggt gaaagggttt
    15601 taaaacaaaa tcgtggctct acaggagagg gaatttggcg tgtgagtgta gagggtaatg
    15661 ttagtggaga tagtttgcct ttaaacacaa aaatcaaatg tacagaagct aaggataatc
    15721 atgtagaaca tagagagctt ggggaattta tggatttttg cgagcaatat atcataggtg
    15781 ataatggtat gcttgtggat atgacttttt taccgcgcat taaagaaggt gaaatcagac
    15841 ttttaatgct ttataacacc cctgtaaatg tagtgcataa aaaaccagcc gaagatgctg
    15901 atgctttttc tgctacgctt tttagtgggg caaaatatcg ctatgataag ccagaagatt
    15961 ggaaaacttt ggtggatatg tttttaggcg agcttcctaa ggtaagggaa aaattaggca
    16021 attacgactt accattgatt tggacggctg attttatttt agatactgat gaaaagggca
    16081 atgataaata tgttttaggc gagattaatt gttcttgtgt aggttttact tctcatttag
    16141 aacttgctga tgaagtagct tcaaatatta ttaatattgt aagtaaaact aaggcttagt
    16201 ctttaagctt aatgtccatt ttattattgt aaaatggaca ttctttttct attgttttta
    16261 agtttgagct atattctatc gagaaaaaat tttcacaaaa tgagcatttt gtatctttgg
    16321 ttagtatagg ataggaatag tcaaatttat ccaaaataaa atattttatt tttttatcct
    16381 taaatttcct tctttgtcta acttatactt tatttattat tttaacgcat aaatagttaa
    16441 ttagaaattt tctgaatatt ttttataaaa ctgtatggct tctttgcatt ttttacattt
    16501 aaattttacg cccttaagtt gaattttttg atgaattcca aatggtacat catgcatttg
    16561 ttctacgcat tcgcatgtat aaagataaac tgtattttca tcatcttttt cttctttgac
    16621 ttcttcaaag cttacttccc catcatcttc agaagttaaa gaagatcttc tgtattgttc
    16681 aactttcaca tctttataga gtatatgttc taaaagccat tttttagaaa ctgtgtaaag
    16741 cttctctttt aaatcattag tggtttttat gttttgtata agataagaca tatcacgaat
    16801 gatattttat gcatgatttt gtgttcattt aaataaggat aatgaatttc ttgcatataa
    16861 tcttcttcat tactaaaatg ttctttcata tagttaaaaa gttctgttaa aatttctttg
    16921 agttcttctc gttttacaaa tttataaaca gcactttcaa ccttgcttgc aagttcacaa
    16981 agtttttggt gttgaatgtc aatcattgtg tcatgaatac tgtatttttc attccaagtt
    17041 ggaattaatt tatct
//
LOCUS       DAPIVO010000041        16945 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.041, whole genome shotgun sequence.
ACCESSION   DAPIVO010000041 DAPIVO010000000
VERSION     DAPIVO010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16945)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16945)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16945
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.041"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            125..1906
                     /locus_tag="RJ239_001188"
     CDS             125..1906
                     /locus_tag="RJ239_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoX family phosphatase"
                     /protein_id="HDV7331310.1"
                     /translation="MERRLFLKGSALGSMVAFFASSNLSAAMLKDKDLLGFKAVSAST
                     QDKVIVPQGYEAKVLISWGDPLFSKAKPYDENKIIDMNAVKNAHLVFGDDNDGMSFFP
                     LSKNRGILAVNNEYINPEIMFNHHGKNLSKEDILYEQASVGVSILEIEKKGDDWTVVL
                     DSKYNRRIDANTKMQVSGAAKKEVLKNEKFVHGTFANCANGQTPWGTYITCEENFDDF
                     FGSLDENLEFNDSLKRYGFNKTSLYGWEKFDERFDLAKNMDEANRFGWIVEINPFDAQ
                     STPVKRTSLGRFKHENAEIIVEKDGSVIVYMGDDEMNEFIYKFVSKHKYKKGADTSKI
                     LDEGILYVGQFNGNVGDFKGQGKWIALEYGKNSLNEKNGFKSQAQVLINTRLAASIVG
                     ATPMDRCEWIASHKQSGSKEVFATLTNNKNRQEPNAANPRTKNVYGQILKWMPKNSHK
                     DDDFTWEIFALAGNPDNQQGLYKGSNNITSENKFNSPDGLKFDRDGRLWIQTDGSYSN
                     KDEYESMGNNCMLAANPKTGEIRRFLTGPIACELTGIAFSEDYTTMFVGIQHPGEGLK
                     GSTFPYGKTPRSSVMMIRKLDGGVIGS"
     gene            complement(1944..2882)
                     /gene="trxB"
                     /locus_tag="RJ239_001189"
     CDS             complement(1944..2882)
                     /gene="trxB"
                     /locus_tag="RJ239_001189"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HDV7331311.1"
                     /translation="MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSS
                     EIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGKTE
                     LAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEA
                     LYLANICSKIYLIHRRDEFRAAPSTVEKVKKNEKIELITSASVDEVYGDKMGVAGVKV
                     KLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGL
                     FAAGDLRKDAPKQVICAAGDGAVAALSAMAYIESLH"
     gene            complement(3016..3330)
                     /gene="trxA"
                     /locus_tag="RJ239_001190"
     CDS             complement(3016..3330)
                     /gene="trxA"
                     /locus_tag="RJ239_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HDV7331312.1"
                     /translation="MGKYIELTSDNFAQAKEGVALVDFWAPWCGPCRMLAPVIDELSN
                     DFDGKAKICKVNTDEQGDLAAEFGVRSIPTLIFFKNGEVVDQLVGAQSKQAISDKLNS
                     LL"
     gene            complement(3387..3725)
                     /locus_tag="RJ239_001191"
     CDS             complement(3387..3725)
                     /locus_tag="RJ239_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HDV7331313.1"
                     /translation="MGVKAYLDGILGEDKACKFLKKQGFEILKRNFHSKFGEIDIIAK
                     KDEILHFIEVKFTQNDYEVSERLDRKKLEKILKTIEFYHLKNGISSDFQIDLICIKND
                     VIQFCENISF"
     gene            complement(3725..4972)
                     /locus_tag="RJ239_001192"
     CDS             complement(3725..4972)
                     /locus_tag="RJ239_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HDV7331314.1"
                     /translation="MKVAILGYGTVGSAVVKFLLENDKLIRARCGQSITPVIALARSP
                     KKNALIPITHSVAEILNADVDVFVELMGGVDEAFKIVSEILKKKKAVVTANKAMLAYH
                     RYELENLAKNLAFGYEASVAGGIPIIKVLKEGLSANNILAIKGILNGTSNYILSSMSQ
                     KNMSFKQALQIAQNLGYAEADPTFDIEGQDAAHKLLVLSSIAYNLKAKPEDILIEGIS
                     EIAPEDMYFANEFEFTIKLLGIAKVRENKVELRVHPTMIDKEKMLAKVDGVMNAISIN
                     GDLLGESLYYGAGAGGEATASAVISDLMDIARDQVKAPMLGFVNTLEYKLLSKDEIYT
                     KYYLRVKVEDKIGILSKITQLMSENNISIDSFLQKPKKNDENYSTLFFTTHLTYEKSI
                     QNLLEILRKQDFIKTKPFMMRIE"
     gene            complement(4976..6178)
                     /locus_tag="RJ239_001193"
     CDS             complement(4976..6178)
                     /locus_tag="RJ239_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LL-diaminopimelate aminotransferase"
                     /protein_id="HDV7331315.1"
                     /translation="MFDEIRFNTIERLPNYVFAEVNAIKMAARRAGEDIIDFSMGNPN
                     GKTPQHIIDKLCESANKDKTSGYSTSMGIYKLRLAICNWYKRKYNVNLDPENEVVATM
                     GSKEGFVNLARAIINPGDVAIVPTPAYPIHTQAFIIAGGNVAKMPLAYNEKFELDENQ
                     FFENLHKTLNESIPCPKYVVVNFPHNPTTVTCEKSFYERLIATAKKERFYIISDIAYA
                     DLTYDDYKTPSILEIEGAKDVAVETYTLSKSYNMAGWRVGFVVGNKRLVSALKKIKSW
                     FDYGMYTPIQVAATIALDGDQTCVDEIRATYDKRMHILLEAFENAGWKLQKPRASMFV
                     WAKLPESKRHLKSLEFSKQLLQRASVAVSPGVGFGEAGDEYVRIALIENENRIRQAAR
                     NIKKYLKE"
     gene            complement(6190..6996)
                     /locus_tag="RJ239_001194"
     CDS             complement(6190..6996)
                     /locus_tag="RJ239_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331316.1"
                     /translation="MVKKIIILTFWVNISFAISSLELAKNLVNNPSKNSQLELLFSNN
                     SYIDNNGNCDIAKISQILKTNSLIALTLSNPQSLRLNFKAKADEVMFFKILSDVLTDA
                     GYIYFIPTDLILREGNIDYTIQVESQYVLDPGTLYNLLKENSVYINNIKRIGVYDYEY
                     DLNFSNAVLKTNTNVNLNTPKSLEKPLKDYVLDLKNATNLIIDANDLDNWFPKIFFLD
                     KNLNLIKAVKSENKNNHFSELIPNGAIYAIVSDMYSLDNIRRGLKITLKK"
     gene            complement(6990..7928)
                     /locus_tag="RJ239_001195"
     CDS             complement(6990..7928)
                     /locus_tag="RJ239_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331317.1"
                     /translation="MLNWKKIQELNLKEVAAKTQIELDFLEALVEKNFAVLSRFNVKG
                     FVKILSREYELDFSDFNEEYEAYLNENNPTPQTKSKMITPKLDAYSQKSFNTWPFLIV
                     LIVLVIIGSGIYYFDTLKTFFKDEQNNTSATVIDIIGQAQENLKSLGGNNVVVIDNNK
                     AQETNRTESVLPSQNISLQENDKNISIENNISENNTTLLDEEKNTQIQEDTNTPKTDS
                     LKEAHFKTSTKIWIGLIDLKSLKKTSFVKEKDFNISLDKDQLILTGAAALTMFDQENK
                     EQKFPAGISKRFLIKDGKITSISAAEFVKLNKGKEW"
     gene            complement(7921..8604)
                     /gene="rlmB"
                     /locus_tag="RJ239_001196"
     CDS             complement(7921..8604)
                     /gene="rlmB"
                     /locus_tag="RJ239_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HDV7331318.1"
                     /translation="MIVYGKQIFFYILEYHKDCINELYLAKECDKITFSKIAKSGFKI
                     KKLDFKTAQAYAKGGNHQGFLLDIKESSFANLNEIKKNDFIVMLYGISDVGNIGAITR
                     TAYALGVGALIFIGEKLAMEGVIRTSSGAALDLPIVISNDALSVINELKQVGFYFYAS
                     DGSGKEIHSVKISNGKKVLVLGSEGFGLSSKIVKKCDECVGIAMKNNFDSLNVSAAFA
                     ILCDRMLNA"
     gene            complement(8618..9442)
                     /gene="rsmI"
                     /locus_tag="RJ239_001197"
     CDS             complement(8618..9442)
                     /gene="rsmI"
                     /locus_tag="RJ239_001197"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HDV7331319.1"
                     /translation="MLYFIPTPIGNLSDISFRALELLKTCDLVFCEDTRVSKSLISLL
                     NTKFHTDIHISKFIALHSHNEKEVLASIDLKIFEKNVAYLSDAGMPGISDPGKALVEF
                     AQENNITYEILPGANAALVALVSSAFCQKEFIFIGFLANKGKERQKDIEKILNFPYPS
                     IIYESPKRILSLVEQIMILDNQREIFLIKEISKKFEKKFKGNAKELSEILKKSNLNGE
                     WVVVLQSKEQNFLQNTLCEKDIMDLELSLKAKAKLLSKINGKNAKEIYQKLLLSQD"
     gene            complement(9445..9645)
                     /gene="rpmE"
                     /locus_tag="RJ239_001198"
     CDS             complement(9445..9645)
                     /gene="rpmE"
                     /locus_tag="RJ239_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HDV7331320.1"
                     /translation="MKKEIHPEYVECKVSCACGNTFTTKSNKAELRVDICSNCHPFFT
                     GSEKIVDAAGRVEKFKKKYAMQ"
     gene            complement(9724..10380)
                     /locus_tag="RJ239_001199"
     CDS             complement(9724..10380)
                     /locus_tag="RJ239_001199"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HDV7331321.1"
                     /translation="MQFLYNKQAGEEFIQLQGENFNHLKVRRVKENSELNLRNLQDNF
                     LYNYTITNLTRNSCTLKFLNKKSQNIKQSELNLALAIIDIKILEKTLPFLNELGVKKL
                     HLVFTNFSQRNFKIDLERFEKIIISSCEQCGRNTKMDLIIHQSTQEFVQKFPNAIMVD
                     FQGEQQSHFDEKELYFIGPEGGFNNDERLLFNRKISLKSSNILKSQTAIIAIASKILL
                     "
     gene            complement(10382..10789)
                     /locus_tag="RJ239_001200"
     CDS             complement(10382..10789)
                     /locus_tag="RJ239_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331322.1"
                     /translation="MDQSYEFFLALHLYSLYASGFLMLFYLILTQGNFKTEFIFIRRI
                     RLFLPIYYLFLALIIFTGCLLSAMKQFQMNVNIWVMIFSWILIFALAIFHFVCFKKAR
                     RFRKYATFRWISCLILPFEIFLLFLPFLIERYL"
     gene            complement(10789..11214)
                     /locus_tag="RJ239_001201"
     CDS             complement(10789..11214)
                     /locus_tag="RJ239_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HDV7331323.1"
                     /translation="MQKAKILIALSFFLLVLSACSNDEKNISKTQNTDQEVVQIEQND
                     EKTELSDSNLPLPVDDEAQSSNDEHEVNPSIINSLYKQKCATCHGEKGELKPKNSTAI
                     KTLSNKIFIQKIKTIKDKNHSFLSDEQIQNLADFINKGK"
     gene            complement(11214..11795)
                     /locus_tag="RJ239_001202"
     CDS             complement(11214..11795)
                     /locus_tag="RJ239_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HDV7331324.1"
                     /translation="MIIRKLFEFENAHIVRFCSSKRCKSSIHGHSYKVEVLLESKYLD
                     NAGMVYDFGLLKTYIRQIIDSFDHAITLFKYDDAKYLEEMKKYSSRWICLPVNVSAEN
                     FCRVFFILIDALLKQTKMVNGEQGVTLQSIIVHETRTGYAQGFREDAYSELMPKISLQ
                     DIEFSNGIKAEWNDIDFYNKLKNEEIFINPKEI"
     gene            complement(11792..12535)
                     /locus_tag="RJ239_001203"
     CDS             complement(11792..12535)
                     /locus_tag="RJ239_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HDV7331325.1"
                     /translation="MQLVESFLSIQGEGKYNGKLAIFMRFAGCNFNCLGFNVKISKND
                     KTLIGCDTIRAVFTKDFKESYETLNANELLKRVIKLKKDFDPIVVITGGEPLIHYENP
                     EFIEFIQMLLKNKFEIHFESNGSIEIDFDRYPFYKECIFALSVKLQNSGIKKDKRLNF
                     KALKAFKNYAKDSFYKFVLDANTLDNSFLEINEILKEAPNQIFCMPMGENEQNLKKNA
                     QKIAEFCIKNGYNYSDRIHIRLWNDKEGV"
     gene            complement(12538..13500)
                     /gene="moaA"
                     /locus_tag="RJ239_001204"
     CDS             complement(12538..13500)
                     /gene="moaA"
                     /locus_tag="RJ239_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HDV7331326.1"
                     /translation="MLIDQFGRKINYLRISVTQRCNFRCLYCMPKIPFDYQPKENLLS
                     FEELFLFVKAAIDEGIEKIRITGGEPLLRKDLSIFIKMISDYKSDIDLAITTNGFLLK
                     DFAKDLKNAGLKRLNISLDTLDHKKAKTLAQKDVLDSVLSGIDEALNLDLKVKLNTVA
                     LKNLNDDELISLLEFAKSKKAQIRFIEFMENTHAYGKLQGLKRDEIIQILSQKYQIQL
                     IKKDEKAPVSIYKADDYEFGIIDPHSHEFCDSCNRIRLSAEGLLIPCLYFDEALSIKE
                     AVRKGDIKAAVEILQEVLRNKPEKNKWSVVDNETSSRAFYQTGG"
     gene            complement(13513..14028)
                     /locus_tag="RJ239_001205"
     CDS             complement(13513..14028)
                     /locus_tag="RJ239_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331327.1"
                     /translation="MSDDVLYLVFIIVLLIAMLAYMNIKERENNAKIAKLQNVIEDIT
                     KELHYFRKELGVKDDSEEDEDYKTSLLKEEIMIELDKQISSKITPVLRTLKTMEHIIE
                     DFQNEQQNRLLNLEQKAQSMAKLTPNYDTEEQKIENLFKEGKSIEQIAKDLRIGTGNV
                     ELVLKFKKLIK"
     gene            complement(14025..14522)
                     /locus_tag="RJ239_001206"
     CDS             complement(14025..14522)
                     /locus_tag="RJ239_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331328.1"
                     /translation="MELALFKAGFEAHLECCEIENNRFLGEYLKLGAISQILKWKKLA
                     LRIDFDEGEKIIFDLLLSLKEDILRLENSLDKNKELIPLKQKGVIESLNFEYLNFLDT
                     ILEEDKEYYLRFDLNNQKIAIFIKAQSQTLAKIIKIKPEDKMAFDAFVVEIQRNMIRN
                     KKGQE"
     gene            complement(14513..15397)
                     /locus_tag="RJ239_001207"
     CDS             complement(14513..15397)
                     /locus_tag="RJ239_001207"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate polyprenyltransferase"
                     /protein_id="HDV7331329.1"
                     /translation="MNTFWIKFKDILELVVFKHSIFALPFLFSSMIVASKLANDTAWF
                     GFKALILGIICAVSARNFAMATNRLMDEDIDKDNPRCANRPNVSGKIGRKSVWIFIII
                     NALIFISCSYFINTLAFYLSFPVLLVLAIYSAFKRFSSLAHLVLGFCLGLAPIAGSVI
                     IMGEIHIYSVILCLGVTFWTAGFDLLYSLQDMEYDKKIGLHSIPAKFGSKATLFISSF
                     CHILAVLFWLLFVWEVWGVALGKIALIGVIISGIILALEHKIVHKNFAHIDRAFFTLN
                     GYLSIIFFIFIWIDLLWN"
     gene            15468..16337
                     /gene="miaA"
                     /locus_tag="RJ239_001208"
     CDS             15468..16337
                     /gene="miaA"
                     /locus_tag="RJ239_001208"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HDV7331330.1"
                     /translation="MFFEIALIGTTASGKTYIANTLAREFNAVVLSLDSLCVYKEINI
                     ASAKPSQDDLASIKYFGVNLLSVNEHFNVELFIREYQKAKEFALARNLPLIIVGGTGF
                     YLKTMIDGLSEKTLESKSSLNNDEIYALLLNIDPNYKIEKNDTYRLKKWLGIYEQTRE
                     IPSEFLKRTQKTGVLKDIEIYELAWDKEILKKRIKTRTKEMLDNGLLDEAKILFSKFD
                     HKLKALNSIGLKECKEYLDGEISFKELENLITIHTTQLAKRQRTFNKKFQSKALEFDK
                     ALATLRMKFSIEK"
     gene            complement(16323..16886)
                     /locus_tag="RJ239_001209"
     CDS             complement(16323..16886)
                     /locus_tag="RJ239_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HDV7331331.1"
                     /translation="MDFYSLIFLSCALGMDAFAVSLCKGFSVKKLHLKHYLIVGIYFG
                     GFQALMPTIGYFIGITFASFIASIDHWIAFILLSLIGLKMIKESLENENCDSNANQFG
                     FKTMLALAIATSIDALAVGVSFAFLNVNLLLAIFLIGIITFILCIIALKIGNKFGIYL
                     KNKAELLGGLVLIILGVKILIEHLFFD"
BASE COUNT         5823 a         2704 c         2232 g         6186 t
ORIGIN      
        1 atacctagtg aaaaactagg tataaatttt ttcttcaatt taaatttttc atcaaagttt
       61 ctaaaaagtt tccaaatatt tttatacttc cattgtttta aatttcaata tggggtaaaa
      121 acaaatggaa agaagattgt ttttaaaagg ttcagcttta ggttctatgg tggctttttt
      181 tgcaagttca aatttaagtg ctgctatgct taaggataag gatttgctag gttttaaagc
      241 tgttagtgca agcacacaag ataaagttat agtaccacaa ggttatgaag caaaggtttt
      301 aatttcttgg ggtgatccac tttttagtaa agcaaaacct tatgatgaaa ataaaatcat
      361 cgacatgaat gcagttaaaa atgctcattt ggtttttgga gatgacaatg atggtatgag
      421 tttttttcca ctttcaaaaa acagaggaat tttagccgtt aataatgaat atataaatcc
      481 tgaaatcatg tttaatcatc atggtaaaaa tttaagcaaa gaagatattt tatatgagca
      541 agccagtgtg ggtgtgagta tcttagaaat cgaaaaaaaa ggtgatgatt ggactgtggt
      601 tttagactct aagtataacc gcagaatcga tgcaaacact aaaatgcaag taagtggagc
      661 agctaaaaaa gaagttttaa aaaatgaaaa atttgttcat ggaacttttg caaattgtgc
      721 aaatggacaa acaccttggg gaacttatat cacctgtgaa gaaaattttg atgatttttt
      781 tggaagttta gatgaaaatc tagaatttaa tgactctctt aaacgctatg gatttaacaa
      841 aactagtctt tatggatggg aaaaatttga tgaaagattt gatttagcta aaaatatgga
      901 tgaagccaat cgttttggtt ggatagtgga aatcaatcct tttgatgcac aaagcacacc
      961 tgttaaaaga acttctttag ggcgttttaa acatgaaaat gcagaaatta tcgtagaaaa
     1021 agatggttct gttatagttt atatgggtga tgatgagatg aatgaattta tttataaatt
     1081 tgttagcaaa cataaataca aaaaaggtgc tgatacaagt aaaattttag atgaaggtat
     1141 tttgtatgta ggacagttta acggcaatgt gggagatttt aaaggacagg gaaaatggat
     1201 agctttagaa tatggcaaaa acagcttaaa tgaaaaaaat ggttttaagt ctcaagctca
     1261 agtactcatc aatacgcgtc ttgctgcaag tattgtaggt gcaactccta tggatagatg
     1321 tgaatggata gcaagccata aacaaagtgg ttctaaagaa gtatttgcaa cactaacgaa
     1381 caacaaaaat cgccaagaac ctaatgcagc aaatccaagg actaaaaatg tttatggaca
     1441 aattttaaaa tggatgccaa aaaattctca taaagacgat gattttactt gggaaatttt
     1501 tgctcttgct ggaaatcctg ataaccaaca aggcttatat aaaggctcaa ataatattac
     1561 aagtgaaaat aaatttaatt ctcctgatgg acttaaattt gatagagatg gaagactttg
     1621 gatacaaaca gatggatctt attctaataa agatgaatac gaaagtatgg gaaataactg
     1681 catgctagca gcaaatccaa aaacagggga aattagacgc tttttaacag ggcctattgc
     1741 ttgtgaatta acagggattg cttttagtga ggattatact acaatgtttg taggcataca
     1801 acatccagga gaaggtttga aaggtagtac ttttccttat ggaaaaacac caagatcaag
     1861 tgtaatgatg ataagaaaac ttgatggtgg agtgatagga agctaaataa aaataaagtt
     1921 gcttttagca actttataaa atcttaatgc aagctttcta tataagccat agcacttaat
     1981 gcagctacag ctccatcacc tgcagcacaa ataacttgct taggcgcatc ttttctaagg
     2041 tcccctgcgg caaaaagtcc agcaacgcta gtttgcattt taagatcaac acttacttgc
     2101 ccaccttctt ccatattgca taaaaactta ctatcgtctt gttttaaaat ttcatttctt
     2161 acgttaagac caacaaaagt aaaaattcct ggaacattta aatctctaat actaccatct
     2221 tttaatttta cttttactcc agcaacaccc attttatcgc catatacttc atctacactt
     2281 gcgctagtaa tgagttctat tttttcgttt ttcttaactt tttctactgt agatggagct
     2341 gctctaaact catctctgcg gtggataaga taaatcttag aacaaatatt tgctagatat
     2401 aaagcttctt ctaaagccgt atctccacca cctaaaactg caacttcttt atttttataa
     2461 aaaaatccat cacaagttgc acaagtgctt acaccttttc caaaaaattc atcttcgccc
     2521 ttaaaacctg ctttttttgg agctgagcct gtacaaacta tcacagcttt agcaagttct
     2581 gttttaccac cttctaattt gatggtaaaa cttccatcac tattttttaa aatttgttct
     2641 actccaacca tttcatgttt taaaccaaaa cgcatacatt gttcactcca aggagccata
     2701 aaagaaattc catccataac ttgggctaca cctggataat tttctatctc agaacttgag
     2761 gtaatttgtc caccaggcat acctttttca aacattacta catttttaag gccacctcta
     2821 gttgcataaa gtccggcact aagtccagca ggacctccac ctatgattgc tacatctaac
     2881 atttatattt cctttatatt gaattttatt attaataatg atataaaaat tattcttaat
     2941 agtagttaat aaaaattatt atttagtata aatttgaaat ttttaagaag aaggctagtt
     3001 atactagcct ttagtttata gtaaagagtt taatttatcg ctaattgctt gtttagattg
     3061 tgcaccaacg agttgatcta caacttcacc atttttaaag aaaataagcg taggaataga
     3121 gcgaacacca aattcagctg ctaaatcacc ttgttcatct gtatttactt tgcaaatttt
     3181 agctttacca tcgaagtcat ttgaaagttc atcaataact ggagcaagca ttctacaagg
     3241 tccgcaccat ggagcccaaa aatcaactaa agctacacct tcttttgctt gagcaaaatt
     3301 atcacttgtt aattcaatat attttcccat aatttttcct ttctttaatt tttgtctaat
     3361 tgtattttat ttttttaaat atcagcttaa aaacttatat tttcgcaaaa ttgtatcaca
     3421 tcatttttaa tgcaaatcag atcaatctga aaatccgatg aaattccatt tttaagatga
     3481 taaaattcta tagtttttaa aattttttca agtttttttc tatccaaacg ctcggaaact
     3541 tcataatcat tttgagtaaa tttaacctct ataaaatgta aaatttcatc ttttttggct
     3601 attatatcga tttctccaaa tttagaatgg aaatttcttt ttaaaatttc aaagccttgt
     3661 ttttttaaaa atttacaagc cttatcttcc cctaaaattc catctaaata agcttttaca
     3721 cccattattc tatacgcatc ataaaaggct tggtttttat aaaatcttgt ttgcgtaaaa
     3781 tttcaagcaa attttgtatg cttttttcat aagttaaatg tgtagtaaaa aacaaagtac
     3841 tgtaattttc atcatttttt ttaggttttt gtaaaaaact atcgatagaa atattatttt
     3901 cactcatcaa ttgtgtgatt ttagataaaa tccctatttt atcttcaact ttcaccctta
     3961 aataatattt tgtataaatt tcatctttgc ttaaaagctt gtattctaaa gtattcacaa
     4021 aaccaagcat tggtgctttt acctgatctc ttgctatatc cataagatct gaaatcacag
     4081 cacttgcagt ggcctctcct cctgctcctg ctccataata caaactttca cccaacaaat
     4141 ctccattaat gcttatagca ttcatcactc catcaacttt tgcaagcatt ttttctttat
     4201 ctatcatagt aggatgcacc cttaattcta ctttattttc acgcacctta gctataccta
     4261 aaagttttat ggtaaattca aactcattag caaaatacat atcttcaggt gcaatttcac
     4321 taataccctc gatcaaaata tcttcaggtt tagctttaag attataagcg atacttgata
     4381 aaacaagcag tttatgtgct gcatcttgcc cttctatgtc aaaagttgga tcagcctctg
     4441 cataacctaa attttgagct atttgcaaag cttgtttaaa actcatattt ttttgactca
     4501 tagaacttaa aatataatta ctcgtaccat ttaaaatccc ttttatagcc aaaatattat
     4561 ttgcacttaa accttctttt aaaaccttga taataggaat tcctccagcc acacttgctt
     4621 cataaccaaa agctaaattt ttagccaaat tttcaagttc ataacgatga taagcaagca
     4681 tagctttatt tgcagtaaca acagcttttt tcttttttaa aatttcactc actattttaa
     4741 aagcttcatc caccccaccc attaattcta caaaaacatc tacatcagca tttaaaattt
     4801 ctgcaacgct atgagtaatt ggaattaaag catttttttt aggacttcta gcaagagcga
     4861 tcacaggagt tatgctttgc ccacatcttg cacgaatgag tttatcattt tctaaaagaa
     4921 atttaaccac cgcacttcca acagtgccat aaccaagaat cgctactttc ataacttact
     4981 cttttaaata ttttttgata ttacgtgcag cttggcgtat gcgattttca ttttcaatta
     5041 aagcaattct tacatactca tcacctgctt cgccaaaacc taccccagga cttactgcaa
     5101 cactagcacg ctgtaaaagt tgctttgaaa attctaaact ttttaaatgt cttttgcttt
     5161 cagggagttt tgcccaaaca aacatacttg ctcttggttt ttgaagtttc cagcctgcat
     5221 tttcaaaagc ttcaagtaaa atgtgcattc ttttatcata agttgcacgg atttcatcta
     5281 cacaagtttg atctccatct aaagctatgg tagctgctac ttgaataggt gtgtacatac
     5341 cataatcaaa ccaagatttt atttttttaa gcgcactgac taagcgttta tttcctacta
     5401 caaaacccac gcgccagcct gccatattgt aagattttga aagagtgtaa gtttctaccg
     5461 ctacatcttt tgcgccttca atttccaaaa tagaaggagt tttatagtca tcataagtta
     5521 aatctgcata agcaatatct gaaataatat aaaatctttc tttttttgcc gttgctatca
     5581 atctttcata aaaacttttc tcacaagtta ctgttgttgg attatgcggg aaattaacaa
     5641 cgacatattt tggacacggg atgctttcat ttaaagtttt atgtaaattt tcaaaaaatt
     5701 gattttcatc aagctcaaat ttttcattat aagctaaagg catttttgct acattacctc
     5761 ctgctataat aaaagcttga gtatgtatag gataagcagg agttggcaca atagcaacat
     5821 ctccaggatt tataatcgct cttgcaagat ttacaaaacc ctcttttgaa cccatagtag
     5881 ctacaacttc attttcagga tctaggttga cattatattt tcttttatac caattacaaa
     5941 ttgctaagcg aagtttataa atccccatgg atgtagaata tcccgaggtt ttatctttgt
     6001 tagcactttc acaaagttta tctataatgt gttgtggagt tttaccattg ggatttccca
     6061 ttgaaaagtc gatgatatcc tctccagcac gtcttgctgc catttttatc gcatttactt
     6121 ctgcgaaaac ataatttgga agtctttcta tggtattaaa acggatttca tcaaacattt
     6181 cttaatcctt tattttttaa gtgtgatttt taaacccctg cgtatattat ctaaactata
     6241 catatcgctt acaatagcat atatagcacc atttggaata agttctgaaa aatgattatt
     6301 tttattttcg ctttttactg ctttaattag attcagattt ttatctaaaa agaagatttt
     6361 aggaaaccaa ttgtctaaat catttgcatc aataatcaaa tttgtagcat tttttaaatc
     6421 aagcacatag tctttaaggg gcttttctaa tgattttgga gtatttaaat taacatttgt
     6481 attggttttt aatacagcat tggaaaaatt taaatcatat tcatagtcat ataccccaat
     6541 acgcttaata ttatttatat agacagaatt ttcttttaag agattgtaaa gcgttccagg
     6601 atctaaaaca tattgagatt ctacttgtat ggtatagtca atatttcctt ctcttaaaat
     6661 caaatctgta gggataaaat atatatatcc agcatctgtt aaaacatcgg ataaaatttt
     6721 aaaaaacata acttcatcag cttttgcttt aaaatttagt cttagacttt gaggatttga
     6781 tagtgttaag gcaattaaag aattggtttt taatatttga gatatttttg caatatcaca
     6841 atttccatta ttatctatgt aagaattatt tgaaaataat aattctagtt gagaattttt
     6901 actaggattg tttactaaat tttttgctaa ttcaagactt gagattgcaa aagatatatt
     6961 aacccaaaaa gtaagaataa taattttttt taccattctt tacctttatt taattttaca
     7021 aattcagcag ctgaaatact tgtaattttt ccatctttaa tcaagaaacg ttttgaaatt
     7081 cctgcaggaa atttttgttc tttattttct tgatcaaaca ttgttaaagc tgcagcccct
     7141 gttaaaatta actgatcttt atctaaagaa atattaaaat ctttttcttt aacaaagctt
     7201 gtttttttaa ggctttttaa atctatcaaa cctatccaaa tcttggtaga ggttttaaaa
     7261 tgtgcttctt ttaaagaatc agtttttggt gtatttgtgt cttcttggat ttgggtattt
     7321 ttttcttcat cgagtagggt tgtgttattt tcactgatat tattttctat gcttatgttt
     7381 ttatcatttt cttgtaatga gatgttttgg cttggtaaaa cgctctctgt tcgatttgtt
     7441 tcttgtgctt tattgttgtc tataacaaca acattgtttc cacctaaaga ttttaaattt
     7501 tcttgtgctt gtcctatgat atctataact gttgcactag tattattttg ttcatctttg
     7561 aaaaaagttt taagtgtatc aaaataataa attccacttc ctataatcac taaaacaata
     7621 agaacaatca aaaaaggcca agtgttaaag gatttttgac tataagcatc tagttttggg
     7681 gttatcattt ttgattttgt ttgtggagta ggattgtttt cgttaagata agcttcatac
     7741 tcttcgttaa aatcactaaa gtcgagttcg tattctctgc tcaaaatttt aacaaaacct
     7801 ttaacattaa aacgacttaa aacagcaaaa ttcttttcta ctaaagcttc aagaaaatca
     7861 agttcaattt gcgtttttgc tgcaacttct tttaaattta attcttgtat ttttttccaa
     7921 ttaagcattt aacatcctat cacaaagtat tgcaaaagca gcgctgacat taagactatc
     7981 aaaattattt ttcatcgcaa tgcccacaca ttcatcgcat ttttttacaa ttttagagct
     8041 taaaccaaaa ccctcactac ccaaaactaa aactttttta ccattgctta tttttacact
     8101 gtgaatttct tttcccgagc catcactcgc ataaaaataa aaacctactt gttttagttc
     8161 atttattaca cttaaagcat cgttgcttat cacaataggt aaatcaagag ccgctccgct
     8221 gcttgtgcga attactcctt ccatggctaa tttttcacca ataaaaatta aagccccaac
     8281 ccctaaagca taagctgtac gcgtgatagc ccctatattt cctacatcac taattccata
     8341 aagcataaca ataaaatcat tttttttgat ctcatttaaa tttgcaaaag aactttcttt
     8401 aatatctagc aaaaaacctt gatgatttcc acctttcgca taagcttgag cagttttaaa
     8461 atcaagtttt ttgattttaa aacctgattt tgcgattttg gaaaaagtaa ttttatcaca
     8521 ttcttttgct aaataaagct cattgataca gtctttatga tattctaaaa tataaaaaaa
     8581 tatttgcttc ccataaacta tcatattaaa attttaccta atcttgactt aaaagcagtt
     8641 tttgataaat ttcttttgca ttttttccat tgatctttga taataatttt gcttttgctt
     8701 ttaaagacag ctctaaatcc ataatatctt tttcacaaag agtattttgc aaaaaatttt
     8761 gctcttttga ttgcagtact acaacccatt caccgtttaa attagacttt tttaaaattt
     8821 cagaaagctc tttagcattg cctttaaatt ttttttcaaa ttttttactg atttctttaa
     8881 tcaaaaaaat ttctctttgg ttgtctagaa tcataatctg ttctactaaa gataaaatac
     8941 gcttggggga ttcgtaaata atacttggat aaggaaagtt taaaattttt tctatatctt
     9001 tttgtctttc tttgccttta tttgctaaaa aaccaataaa gataaattct ttttgacaaa
     9061 atgctgagct tacaagagca actaaggctg catttgcacc tggtaaaatt tcataggtga
     9121 tattattttc ttgtgcaaat tctaccaaag ccttgccagg atcactaatc cctggcattc
     9181 ctgcatcgct taaataagct acattttttt caaatatctt taaatcaata cttgctaaaa
     9241 cttctttttc attatgggag tgtaaggcta taaatttaga aatatgtata tcagtgtgaa
     9301 atttggtatt taataacgaa atcaaagact tacttactct tgtatcttcg caaaacacaa
     9361 gatcgcaagt ctttaaaagt tctaaggctc taaaagaaat atcgcttaaa tttcctatgg
     9421 gagtaggaat aaaataaagc ataattattg cattgcgtat tttttcttaa atttctctac
     9481 acgacctgca gcatctacaa ttttttcact gcctgtaaaa aaaggatggc aatttgaaca
     9541 aatatctact cttaattctg ctttgtttga ctttgttgta aaagtatttc cacaagcaca
     9601 acttactttg cattctacat attctgggtg aatttctttt ttcattagtt ttccttaaaa
     9661 attaaaacaa taagccgtga ttataaatta tttaacataa aaaagagatt aatttaagaa
     9721 aagttaaagc aaaatttttg aagctatagc tataatagct gtttgacttt ttagaatatt
     9781 agagctttta agagagattt tccggttaaa caataatctc tcatcattgt taaatccacc
     9841 ttcaggacct ataaaatata attctttttc atcgaaatga ctttgttgtt ctccttgaaa
     9901 atcaaccata attgcatttg gaaatttttg aacaaattct tgagtgcttt ggtggataat
     9961 taaatccatt ttagtatttc taccgcattg ttcacaagaa gaaataatga ttttttcaaa
    10021 tctttctaaa tcgattttaa aatttctttg tgaaaaattt gtaaaaacca aatgtaactt
    10081 ttttactcca agttcattta agaaaggtag agttttttct aaaattttaa tatctataat
    10141 ggctaaggct aagtttaatt cactttgttt tatattttgt gattttttgt ttaaaaattt
    10201 taaagtgcaa gaatttcttg ttaaatttgt gattgtatag ttgtaaagaa aattatcttg
    10261 taaatttcta agatttagct ccgaattttc ctttactctt cttactttta aatggttaaa
    10321 gttttcacct tgaagttgta taaactcttc tccagcttgc ttgttataca aaaattgcat
    10381 tttatagata tctttctatt aaaaaaggca aaaacaataa aaaaatttca aaaggtaaaa
    10441 tcaaacaact aatccatcta aaagtggcat attttctaaa tcttcttgct tttttaaaac
    10501 aaacaaagtg aaaaattgct aaggcaaaaa ttaagatcca agaaaaaatc attacccaga
    10561 tattgacatt catttgaaat tgtttcattg ctgataacaa acaacctgta aaaataatca
    10621 aagctaaaaa taaataataa attggtaaaa ataatcgtat tctgcgaata aaaatgaatt
    10681 cggttttaaa atttccttgt gttagtataa gataaaaaag cattaaaaaa ccgctcgcat
    10741 aaagactata aagatgtaaa gctaaaaaga attcgtaact ttgatccatt attttccttt
    10801 gtttataaaa tcagctaaat tttgaatttg ttcatcactt aaaaaactat ggtttttatc
    10861 ttttatcgtt tttatttttt gtataaaaat tttattgctc aaggttttaa tggccgtgct
    10921 gtttttaggt tttaattccc ctttttctcc atgacaagtg gcgcattttt gtttatataa
    10981 agagttgata atactaggat tgacttcatg ttcatcattt gaactttgtg cttcatcatc
    11041 tacaggtaaa ggcaggttgg agtcacttaa ttctgttttt tcatcgtttt gttctatttg
    11101 gactacttct tgatctgtat tttgagtctt ggaaatattt ttttcatcat tagaacaggc
    11161 agataaaact aataaaaaaa aacttaaggc aattaaaatt ttagcttttt gcattaaatc
    11221 tcctttggat ttataaaaat ttcttcattt tttaatttgt tataaaaatc tatatcattc
    11281 cattctgctt taatgccatt ggaaaattct atgtcttgaa gtgaaatttt tggcattagc
    11341 tcactatagg catcttctct aaaaccttgt gcatagcctg ttcttgtttc atgaacaatg
    11401 atgctttgta aagtcactcc ttgttctcca tttaccattt ttgtttgttt taataaagca
    11461 tctataagta tgaaaaatac acgacaaaaa ttttcagcac ttacattaac aggcaggcaa
    11521 atccaacgac ttgaatattt tttcatttct tctaaatatt ttgcgtcatc atatttaaaa
    11581 agagtgatag catgatcaaa actatcaata atttggcgta tataggtttt taaaagtcca
    11641 aaatcataga ccattccagc attatctaaa tatttgcttt caagtaaaac ttcaactttg
    11701 taagaatgtc catgaatgct acttttgcaa cgcttagaag aacaaaatct aacaatgtgt
    11761 gcgttttcaa attcaaataa ttttcttata atcatacacc ctctttatcg ttccaaagac
    11821 gaatatgaat tctatcagaa taattataac cattcttaat acaaaattca gcaatttttt
    11881 gagcattttt tttaaggttt tgctcatttt cacccatagg catacaaaaa atttgatttg
    11941 gagcttcttt tagaatttca ttgatttcta aaaatgaatt atcaagagta ttggcatcta
    12001 aaacaaattt ataaaaacta tcttttgcgt aatttttaaa tgcttttaaa gctttaaaat
    12061 ttaatcgttt atcttttttt atcccactat tttggagttt aacgcttaaa gcaaaaatac
    12121 attctttgta aaaaggatat ctatcaaaat caatttctat gcttccattg ctttcaaagt
    12181 gtatttcgaa tttatttttt aataacattt ggataaattc tataaattca ggattttcat
    12241 aatggattaa tggctctcca cctgtgataa caactatagg atcaaagtct ttttttaatt
    12301 ttatcactct ttttaaaagt tcattagcat ttaaagtttc ataactttct ttaaaatctt
    12361 ttgtgaaaac agctcttatc gtgtcacatc caatgagagt tttatcgttt tttgatattt
    12421 ttacattaaa acctaaacag ttgaaattgc aaccagcaaa acgcataaaa atagctaatt
    12481 ttccattata tttgccttct ccttgaatgc ttaagaaact ttcaacaagt tgcaaaatta
    12541 acctccagtt tgataaaaag cacgagatga ggtttcatta tcaacaacac tccatttatt
    12601 tttttctggt ttatttctta atacttcttg taatatttct acagcggctt taatatcacc
    12661 ttttcgaacc gcttctttta tgcttaatgc ttcatcaaaa taaaggcaag gtattaacaa
    12721 gccttcagca cttaagcgta tgcgattgca agaatcgcaa aattcatggc tatgaggatc
    12781 tataattcca aattcataat catctgcctt gtaaatactc acaggtgctt tttcatcttt
    12841 ttttataagt tgaatttgat atttttgact caaaatttgt ataatttcat ctctttttaa
    12901 tccttgtaat ttaccataag catgagtatt ttccataaat tctataaagc gaatttgagc
    12961 tttttttgat tttgcaaatt ccaaaagaga tatcagttca tcatcgttta aatttttaag
    13021 agctacagta ttaagtttta ctttcaaatc tagatttaaa gcttcatcaa ttccagataa
    13081 aacactatct aatacatctt tttgcgcaag agtttttgct tttttgtgat ctagggtatc
    13141 aagtgaaata ttaagtcgtt taagtccagc attttttagg tctttagcaa agtcttttag
    13201 taaaaatcca tttgtagtta tagcaaggtc aatatcgctt ttataatcgc taatcatttt
    13261 tataaaaata cttaaatctt ttcttaataa aggttcccca cctgttatac ggattttttc
    13321 aattccttcg tctatagctg ctttaacaaa taaaaaaagt tcttcaaagc ttaataaatt
    13381 ttcttttggc tgataatcga aaggaatttt tggcatacaa taaaggcagc gaaagttaca
    13441 tctttgtgta actgaaattc taagataatt tatctttcta ccgaattgat ctataagcat
    13501 ttattttcca ttctatttta ttaatttctt aaattttaag acaagttcta catttccagt
    13561 gccaatgcgt aaatctttag cgatttgttc tatgcttttt ccttctttga aaagattttc
    13621 tattttttgt tcttctgtat cgtaatttgg tgtaagttta gccatgcttt gtgctttttg
    13681 ttccaaattt aaaagacgat tttgttgttc attttgaaaa tcttctatga tatgttccat
    13741 agtttttagt gttcttaaaa caggagtgat ttttgaactg atttgtttat caagttcaat
    13801 cataatttct tcttttaaaa gagaggtttt atagtcttca tcctcttcgc tatcatcttt
    13861 aactcctaat tctttacgaa aataatgaag ttctttggta atatcttcta tcacattttg
    13921 aagttttgct atttttgcat tattttctct ttctttgata ttcatgtagg ctagcattgc
    13981 aattaaaagc acaattataa aaactaaata aagtacatca tcactcattc ttggcctttc
    14041 ttatttctta tcatatttct ttggatttca acaacaaaag catcaaaagc cattttgtct
    14101 tcaggcttaa ttttgataat ttttgccaat gtttgacttt gagctttgat aaaaatagct
    14161 attttttgat tatttaaatc aaatcttaaa taatattctt tatcttcttc taaaatagta
    14221 tccaaaaaat ttagatactc aaaatttaaa gattctatta cccctttttg cttaagtggt
    14281 ataagttctt tatttttatc taaagaattt tcaagtctta aaatatcttc ttttagactt
    14341 aaaagaagat caaaaataat tttttcaccc tcgtcaaaat caatgcgtaa agcaagtttt
    14401 ttccatttta aaatttgaga aattgctcca agttttaggt attctccaag aaaacggtta
    14461 ttttctattt cacaacattc taaatgagct tcaaatcctg ctttaaaaag tgctaattcc
    14521 ataataaatc aatccaaata aaaataaaaa agataatact taaataacca tttagagtaa
    14581 aaaatgctct atcaatatga gcaaaattct tatgaacaat tttatgttcc aaggctaaaa
    14641 taataccgct tataattacc ccaataagtg ctatttttcc aagtgctaca ccccaaactt
    14701 cccacacaaa aagaagccaa aataataccg ctaaaatatg gcaaaaagat gatataaata
    14761 aagtagcctt tgaaccaaat ttagcaggaa tagagtgaag tcctattttt ttatcatact
    14821 ccatatcttg taaagaataa agcagatcaa acccagctgt ccaaaaagtt acacctaaac
    14881 ataaaataac gctataaatg tgaatttcac ccataattat aacacttcct gcaataggcg
    14941 caagtcctaa acaaaatcct aaaactaaat gtgctaaaga actaaagcgc ttaaaagctg
    15001 aataaatagc caataccaaa agcacaggaa aagacaaata aaaggccaag gtattaataa
    15061 aataagaaca tgatataaaa ataagtgcat taataatgat aaaaatccat acgctttttc
    15121 tacctatttt tccactgaca ttagggcgat ttgcacaacg aggattatcc ttatctatat
    15181 cttcatccat taaacgattt gtagccatgg caaaatttct tgcacttact gcacaaataa
    15241 tgcctaaaat caacgcctta aaaccaaacc aagcagtgtc atttgcaagt tttgatgcta
    15301 caatcataga ggaaaataaa aaaggcaaag caaaaataga atgcttaaat actacaagtt
    15361 ctaaaatatc tttaaatttt atccagaatg tgttcatttt tctactttaa aatatttttt
    15421 gctatgattt tactaaaatt tttataaatt ttaggataaa tattaaaatg ttttttgaaa
    15481 tagcattaat aggaacaacc gcgagtggaa aaacatacat agccaatact ttagcaagag
    15541 aatttaatgc tgttgtttta agtcttgata gtctttgtgt ttataaagag attaatatag
    15601 caagtgccaa gccttcacaa gatgatcttg cgagtataaa atactttggg gtaaatttat
    15661 tgagcgtgaa tgaacatttt aatgttgagt tattcataag agaatatcaa aaagcaaaag
    15721 aatttgcttt agctagaaat ttacctctaa ttatagtagg tggaactgga ttttatttaa
    15781 aaactatgat agatggttta agtgaaaaaa ccttagagtc aaagagttct ttaaataacg
    15841 atgaaattta tgctctttta ttaaatattg atccaaacta taaaatagaa aaaaatgata
    15901 cttatagatt aaaaaaatgg ctgggtattt atgaacaaac aagagaaatt cctagtgaat
    15961 ttttaaaaag aacacaaaaa actggggtgc ttaaagatat agaaatttat gagcttgcgt
    16021 gggataaaga aattttaaaa aaacgtatta aaactagaac aaaagaaatg cttgataatg
    16081 gacttttaga tgaagcaaaa attctttttt ctaaatttga tcataaactt aaagcattaa
    16141 attctatagg tttgaaagag tgtaaagaat atttagatgg agaaatttcc tttaaagagc
    16201 ttgaaaattt aatcacgata catactacac aacttgccaa aagacaaaga acttttaata
    16261 aaaaatttca aagtaaagcc ttggaatttg ataaagcttt agctacttta agaatgaaat
    16321 tttcaatcga aaaataaatg ttctattaga atttttactc ctagtataat taaaaccaat
    16381 ccgcctaaaa gttcagcttt atttttaaga taaattccaa atttattccc tatttttaga
    16441 gcaatgatac ataaaatgaa ggtgataata cctattaaaa atatagctaa taataaattt
    16501 acatttaaaa atgcaaaact cacaccaact gctagtgcat cgatactcgt agcaattgct
    16561 aaagctagca tggttttaaa gccaaattga ttggcattac tatcgcaatt ttcattttcc
    16621 aatgactctt tgatcatttt taatcctatt aaagaaagta aaataaaagc tatccaatga
    16681 tcaatactcg caataaaaga tgcaaaagtt atgcctataa aataaccaat agttggcatc
    16741 aaagcttgaa atccaccaaa ataaattcca acaataagat aatgttttaa atgtagtttt
    16801 ttaacactaa aacctttgca tagtgataca gcaaaagcat ccattcctaa agcacaggat
    16861 aaaaaaataa gactataaaa atccataaca aatcctaaaa ttttataaaa aattgaagat
    16921 gaaattataa tcaaacaaag ataaa
//
LOCUS       DAPIVO010000042        16278 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.042, whole genome shotgun sequence.
ACCESSION   DAPIVO010000042 DAPIVO010000000
VERSION     DAPIVO010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16278)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16278)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16278
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.042"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..789
                     /locus_tag="RJ239_001210"
     CDS             <1..789
                     /locus_tag="RJ239_001210"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HDV7331332.1"
                     /translation="LNKKNGDDGAIIDDWCFSKDLFFENVHFKREWFSLEQIATKAML
                     VNISDAISMNAVPKYALLGLALPKNLSENEIKALQKGFLKTARKFNIKIIGGDTISND
                     KIDISLTIISKINDKAVFRKGLKKGHLLAYTGKLGRSLKGLEILQNGGTLKPNHVFIK
                     PKLRASFFYEIAPLISCAMDISDGLSKDLSRLLALNKCGISWFKKLDDYALYSGEEYE
                     ILFAFDEKERQNIEIIAKKHGVKLNIFGKAVKGKYEFRGREHHF"
     gene            758..1876
                     /gene="truD"
                     /locus_tag="RJ239_001211"
     CDS             758..1876
                     /gene="truD"
                     /locus_tag="RJ239_001211"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HDV7331333.1"
                     /translation="MNLEEENTIFKPLYSLKHSPINAYFSKNSDDFVVRERPLYEFSG
                     KGEHLILHINKKDLTTNEALKILSEASGVKIRDFGYAGLKDKQGSTFQYLSMPKKFES
                     FLSNFSHPKLKILEIFTHENKLRIGHLKGNSFFIRLKKVLPSDALKLEQALMNLDKQG
                     FANYFGYQRFGKFGDNYKEGLEILRGKKMKNVKMKEFLISAFQSELFNRYLSKRVELS
                     HFANDFSEKELIQIYKISKEEAKELKKQEQFFKLLKGEVLGHYPFGKCFLCEDLSAEL
                     GRFKARDISAMGLLIGAKAYETGEGLALNLENEIFKDTLEFKAKMQGSRRFMWGYLEE
                     LKWRYDEEKAHFCIEFFLQKGSYATVVLEEILHKNLFE"
     gene            1998..2312
                     /locus_tag="RJ239_001212"
     CDS             1998..2312
                     /locus_tag="RJ239_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331334.1"
                     /translation="MKKILTSALALGAMTLIVDCGDGDLVELKNNGNDQAMFDLGNQE
                     IMKKYPNYKLYDYTSVRTISDINNPEGKIKEMKRDLEIDKTPYSNYVFLLNPNDKKTI
                     KL"
     gene            complement(2470..3567)
                     /gene="prfB"
                     /locus_tag="RJ239_001213"
     CDS             complement(2470..3567)
                     /gene="prfB"
                     /locus_tag="RJ239_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HDV7331335.1"
                     /translation="MDNYEFSELLKTLKNKVGNIASIIKPENIQTRLKEIEELENSPS
                     FWSDVKQAGIIGKEKTKITNLLKNYENAFNALNDASELFDLANSENDTETLEALFNDA
                     PKLEDTITSLEISMLLSGENDGKNAIVSIHPGAGGTESNDWASILYRMYLRFCEREGF
                     KVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFSS
                     VMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQND
                     RSQHKNKATAFKMLKSRLYELELMKQQDSANTGEKSEIGWGHQIRSYVLFPYQQVKDN
                     RSGEAFSQVDNILDGDIKKMIEGVLIALKAE"
     gene            3641..4960
                     /gene="rimO"
                     /locus_tag="RJ239_001214"
     CDS             3641..4960
                     /gene="rimO"
                     /locus_tag="RJ239_001214"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HDV7331336.1"
                     /translation="MSKLYLMSLGCNKNLVDSEIMLGHLSAYELCDEPSKADVLIVNT
                     CGFIDSAKKESINAILDLHEQRKKDSLLVVTGCLMQRYREELMKELPEVDLFTGVGDY
                     ERIDEMILKKTNLFSNSTYLQSENSKRIITGSNSHAFIKIAEGCNQKCSFCAIPSFKG
                     KLKSREISSIIAELKDLVARGYKDFSFIAQDTSSYLFDKGEKDGLIRLIDEVEKIKGI
                     RAARILYLYPTSASEALIKRIIASEIFINYFDMPLQHISDNMLKIMKRGANSTRLKEM
                     LNLMKSAPNSFLRTGFIVGHPGESEADFEELCEFVKDFGFDRISVFAYSKEEDTAAFD
                     MEQVPFKVINKRLKIIEKIVDEVIEKSFEKEVGQKRLVVCTGKSSEGEFFIAAKDLRW
                     DREIDGEILINESECGNLEMGQIYECEILQNLDKKLLAKALRKVDAN"
     gene            4950..5915
                     /gene="tilS"
                     /locus_tag="RJ239_001215"
     CDS             4950..5915
                     /gene="tilS"
                     /locus_tag="RJ239_001215"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HDV7331337.1"
                     /translation="MQIKDEILSLLKRGKNLLAFSYGSDSSVLFYLLMQEKIDFDLVM
                     INYKTRKNSDLEELKAKELALKFHKKIFIKHAPKFQSNFEKKARDFRYDFFEKICLEQ
                     GYDHLILAHHLNDQFEWFLMQLSRGAGLAEILGMQECEKRSNYTLLRPLLFISKDEIS
                     SFLKEKDIFYFHDESNENEKYFRNYIRKNFSNAFVSEFHQGLKRSFSYLDEDRKKLYD
                     FENIKEIQGLLICPKNESLIARAVKMKGLLLSTAQRKELLKGDCVLGGKIALAYKNEQ
                     AIVFEYETCQKLPKNFKEECRIAKIPRLLRAYLYNHKIDISSLSF"
     gene            complement(5898..6611)
                     /locus_tag="RJ239_001216"
     CDS             complement(5898..6611)
                     /locus_tag="RJ239_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EI24 domain-containing protein"
                     /protein_id="HDV7331338.1"
                     /translation="MDILKLAIKDFLSLKFLKFALIPLIFSLILMLFLGVLGFSALLD
                     YFNSLFSVGEDSFWAWFYALHFVQILITIISFLFSGFIVVFASVFLALFITSFLTPFI
                     AKEINKKYYHYDNTNEVSTLKTIFEIFKIFIKFIGILLLCTLALFLPFINIFVYYLAF
                     YYLFHKLLMIDVTSTILDKESFKNFHSDFSPLEFKFSTLCFYLLSSVPLLGLFLQVFF
                     VIFLTHLSYQRILKLKAKA"
     gene            complement(6613..7302)
                     /gene="dut"
                     /locus_tag="RJ239_001217"
     CDS             complement(6613..7302)
                     /gene="dut"
                     /locus_tag="RJ239_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTPase"
                     /protein_id="HDV7331339.1"
                     /translation="MTNIEILENMLKLQQKLNDETNGLNWENGYTKEGKLISWRRCIY
                     MECAELIDSFTWKHWKNISSLTNWENVRIEIVDIWHFILSLLLEEYRDKNNKDFKAIA
                     TEVNAVSVFQDFCKEEEYPNEGDIYGILNDIELIIHKCSGFGFNLGELLSTYFTLAIK
                     CGLNLEILYKTYIGKNVLNIFRQNNGYKDGSYKKTWNGKEDNEVLAQILEQELDFDTI
                     YKKLEECYKKA"
     gene            complement(7339..7902)
                     /gene="ciaI"
                     /locus_tag="RJ239_001218"
     CDS             complement(7339..7902)
                     /gene="ciaI"
                     /locus_tag="RJ239_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular survival protein CiaI"
                     /protein_id="HDV7331340.1"
                     /translation="MQIDASKNQSFSMDYTTKSGKHLALSMYDNQSVSYANNEEGKTL
                     NLKRQYGFSFTFEGSKLTQNDLDEIKNAMKEVEPMIKDFLANSKVGELKPKEIIESAM
                     QMANVLPTPNDENHQNAIMNNFTNKLSDLLKQNQTDDKDINASMLEDSKKLLDEVLEQ
                     MKKQLEKQQEKAKENQDKTDDSLNLYA"
     gene            7977..8384
                     /locus_tag="RJ239_001219"
     CDS             7977..8384
                     /locus_tag="RJ239_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331341.1"
                     /translation="MDERILEFIKNEQLLSWAMIDEKGVYTASAFYAFDEKNLAFIIA
                     SHEDTKHIRLASENSSIALNIAKESKIAFLKGVQAKAEFKMASKEQMKIYFSKFPFAK
                     FDKSAKIYALELFWLKFTNNALGLSKKLEFYKK"
     gene            8456..9238
                     /gene="kpsM"
                     /locus_tag="RJ239_001220"
     CDS             8456..9238
                     /gene="kpsM"
                     /locus_tag="RJ239_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide transporter KpsM"
                     /protein_id="HDV7331342.1"
                     /translation="MLNVIYALFFRELKTRFGKNRYLGYIWVVGEPMSIVLLVTIIGT
                     IVREYHHQVMPEGISIFMFLISGIMPFFMFRSIVTQLMNGTQANLALFAYKPVKPIHV
                     FIARTLLEFCIYFVIFIIILFFAGWFFRLDVFPVHLLGVLFCIFLLICSAFALGICFA
                     IIWHFVEPLRTLLAYFSIVFYWTSGIIFPTWLTPRPLLDIFYYNPLLHIFELLRFNFF
                     ENYPLQDEYSYFYAIFWILLVLFIGLFIYYYNRQALTAVKKE"
     gene            9235..9897
                     /locus_tag="RJ239_001221"
     CDS             9235..9897
                     /locus_tag="RJ239_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7331343.1"
                     /translation="MIKLINLTKSYPLFSGGRHYVFKNFTFEFPENCSIGLMGYNGAG
                     KSTLMRLLSGAELPDSGKIITNKKLSWPLGLNGAFQGSLTARDNAKFVARVYGYKGKE
                     LQEKVKFVEDFAELGKFFDEPMKTYSSGMSARIAFGLSMAFDFDYYLIDEAGAVGDPA
                     FREKSVKLYRERLSKSKVIMVSHNVAEIKEWCDKIIYMKNGQITVYDDVDEGIAVYQG
                     KV"
     gene            9897..11015
                     /locus_tag="RJ239_001222"
     CDS             9897..11015
                     /locus_tag="RJ239_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HDV7331344.1"
                     /translation="MEENKTLLEKIKDLSIFDSFKIVWFIMIFVVIYYTLIAAPRYVS
                     TMILDVRSTSGESAQTSGILSLLSSTSTASEDLNYLKGYIESSDMLKILDEKIKLKNL
                     YQEQHIDLPFKIWDSSSIESYLKYYQARVKVHTDETTKLLKVEVEGFTPKSAHLIAQA
                     IMQESEKFINEISHKAAREQMAFAENEVQKYKERYQKAQNDLIAFQNKYGVFDPLKQA
                     ETKASLVAQIEANLAQKEAKLLTLQSYMNDAAPEVVALKAEIEAIKKQLLREKSKISA
                     NNSSQKLNDLAAKFQDLTIEATFAQKAYEAALKAYESARIEALRKIKQLVIIQSPDIP
                     ESAKYPERIYDILTAFIVLSLIFGIVKFIKMIIEEHKY"
     gene            11017..12675
                     /locus_tag="RJ239_001223"
     CDS             11017..12675
                     /locus_tag="RJ239_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLBB domain-containing protein"
                     /protein_id="HDV7331345.1"
                     /translation="MKKILILLFSCILCFGAVDVSQIISAEDQGSATTSIDQNLSSNY
                     DIANKENNLTKIHQILVFGAHLFNGNFKNYNQRVYNPDYKIAVGDQISLKIWGAVEFS
                     QVLVVDSQGNIFIPKVGAVNLLGVKNSALVSVIKARVNKIYKSNVFVYADMNAYQNVS
                     VFVTGNVNAPGLYQGLSSDSVIQYLDKAGGINLEYGSFRDIQILRNNSVIKNIDLYDF
                     LLKGQMDLFPFRSGDVILVGNVQNYAFVNGDVQRPFRFELSNDIKTLADLARVSGAKP
                     IVTNAIVKSYGEDHKLDVSAYNKMQFSKVLLRTGDEVEFHPEYVSENITISVNGEHNG
                     LKTLVVGKGTTLEDISKLIKANPQSNMQALQVFRKSVARTQKELINAQLKELETLALT
                     SGSVTAQGAAIRAQQAKTILEFIQRAKQVEPKGQIVIDNPKSYNSVILEDGDTINVPS
                     KNNLIIVQGEVSLPGAFVYDKGKDLRYYINLAGGYGERADTSKVLVIRSNGKAEKYHS
                     GIDMKRGDSVLVLPKVDSENLQIFSMLTQILYQIAIATNVVLNL"
     gene            12686..13633
                     /locus_tag="RJ239_001224"
     CDS             12686..13633
                     /locus_tag="RJ239_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HDV7331346.1"
                     /translation="MNTLEIAKEVFEKEAQAILDLATNLDENFNQAVNLMLNTKGRCI
                     VSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHGDLGMLTSEDVLIAISNSGETEE
                     ILKIIPAIKKREIPLIVMCGKKNSTLVKQGDIFLNIAVEKEACPLQLAPMSSTTATLV
                     MGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDL
                     VDVMTSGKLGLCVVLENEKLVGIITDGDLRRALKASDKPRFDFKAKEIMSINPKVVDA
                     DAMASEAEGIMLKHKIKEIIVGKEEKVVGIIQLYAIGNV"
     gene            13633..15267
                     /locus_tag="RJ239_001225"
     CDS             13633..15267
                     /locus_tag="RJ239_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDV7331347.1"
                     /translation="MPLLSVIIPFGLSKERPYIEERVLQKAKFFQSDENIEFIFVEGY
                     SSKDHELKNFIQANHHIYLKDMDQKAFSQGRCRNLGASYAHSNVLLFLDVDCYISLDN
                     FEKILKLIQIKNISQNINALIVLPVVYLNKEANEKLKQYDDKFWDILIQEDLFTAKNT
                     WVKFFAPSSTSSIVINKHQFLRLGGNDENFIGHGYEDFDLFARILKACVSFEKMPTNL
                     SYDARNWNFFNFKGFRSWFSLLGYEACFYGIYIYHFYHIEPNQNAYMQNKDKNHQLFY
                     KHLKNIKKHDLKPLQVFKAKGEKVLMLFKDQNYDFKDISVYVGEIIYKNISDFFIAKE
                     LKYELLLDFLQQEKITKIFLDASIKLQFNGIDYCDIFYFQKGILPHSWFFAKKLDLGY
                     KQDLNLSEQKLYQVKEYFLTLKEDEKKVILDFLSQNNDDKYDLYKMLYYLINELYSFE
                     HDGIFYQIIIDKEKMLIAQKHDKSFYPLRSFVYKPYLHELKSIRPFSFLMKILGLEYL
                     GAMISHTKFYRLARKLFFNPKGFFEDFNYKIMKGKI"
     gene            15264..>16278
                     /locus_tag="RJ239_001226"
     CDS             15264..>16278
                     /locus_tag="RJ239_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HDV7331348.1"
                     /translation="MKIVIVGIGYVGLANAILFSKNNENEVVLLDIDENKIQSINNHK
                     SPIKDKLIEKFFVQNISKLHATSNIKEAYFNADFAVIATPTDYDEQLNFFDTRSIENV
                     LKDIKNINSKINVIIKSTVPIGYTKTIKQKFNMSNIVFSPEFLREGSALYDSLYPSRI
                     IIGDKSVLGKTIGDLFLKNIEKKNVDIFYMDSDEAESVKLFSNTYLAMRVGFFNEVDS
                     YARKHNLNSADIIKGISADDRIGKYYNNPSFGYGGYCLPKDTKQLLANFYNIPNSLIK
                     AIVETNEIRKKFITQLILEKKPNILGIYRLIMKQNSDNFRNSVIIDIIKYLQEYNSNI
                     ELII"
BASE COUNT         5732 a         2002 c         2855 g         5689 t
ORIGIN      
        1 ttaaataaaa aaaatggtga tgatggagct attattgatg attggtgttt tagtaaggat
       61 ttgttttttg aaaatgtgca ttttaaaaga gagtggttta gcttagagca aattgctaca
      121 aaagcaatgc ttgttaatat ctcagatgct atttcaatga atgctgtacc aaaatacgca
      181 cttttaggac ttgctttacc aaaaaattta agcgaaaatg agatcaaagc cttgcaaaaa
      241 ggttttttaa aaacagctag gaaatttaat ataaaaatca taggcggtga tactataagc
      301 aatgataaaa tagacattag tcttactatc atttcaaaga ttaacgataa agctgttttt
      361 agaaaaggtt taaaaaaggg gcatttactt gcttatacgg gaaaattagg acgaagttta
      421 aaagggcttg aaattttaca aaatgggggc actttaaaac caaaccatgt atttataaag
      481 ccaaaattaa gagctagttt tttttatgaa atcgcacctt taatttcttg tgctatggat
      541 atttcagatg gtttaagcaa ggatttatca aggcttttag ctttaaataa atgcggtatt
      601 tcttggttta aaaaacttga tgattatgcg ctttatagcg gagaagaata tgaaattttg
      661 tttgcttttg atgaaaaaga acggcaaaat atagaaataa tagccaaaaa acacggcgtg
      721 aaattaaata tctttggaaa agcagtgaaa ggaaaatatg aatttagagg aagagaacac
      781 catttttaag cctttgtata gtttaaaaca cagtcctatt aatgcgtatt ttagtaaaaa
      841 tagcgatgat tttgtagtgc gtgaaaggcc tttgtatgaa tttagcggta agggtgagca
      901 tcttattttg catatcaata aaaaagattt aaccacaaat gaagctttaa aaattttaag
      961 tgaagcaagc ggggttaaaa taagagattt tggttatgca gggcttaaag acaagcaagg
     1021 atcaaccttt caataccttt ctatgcctaa aaaatttgag agttttttgt caaatttttc
     1081 tcatcctaaa cttaaaattt tagaaatttt tacccatgag aacaagctaa gaataggcca
     1141 tttaaaagga aattcttttt tcatacgctt aaaaaaagtt ttaccaagcg atgctttaaa
     1201 actagaacaa gctttgatga atttggataa acaaggtttt gcgaattatt ttggctatca
     1261 gcgttttgga aaatttgggg ataattacaa agaagggctt gaaattttgc gtggcaaaaa
     1321 gatgaaaaat gtaaaaatga aagagttttt aatttcagct tttcaaagtg agctttttaa
     1381 tcgctatttg agtaaaagag tggagttatc acattttgca aatgatttta gcgaaaaaga
     1441 attgatccaa atttataaaa tttctaaaga agaagctaag gaacttaaaa aacaagaaca
     1501 attttttaag cttttaaaag gtgaggtttt agggcattat ccttttggaa agtgtttttt
     1561 atgcgaggat ttaagtgctg agcttgggcg ttttaaggca agagatataa gcgccatggg
     1621 gcttttaatc ggtgctaagg cttatgaaac aggagaaggt ttggccttaa atttagaaaa
     1681 tgaaattttt aaagatactt tggagtttaa ggctaaaatg caaggttcaa gacgctttat
     1741 gtggggatat ttagaagagt taaaatggcg ttatgatgaa gaaaaagctc atttttgtat
     1801 agagtttttc ttgcaaaaag gctcttatgc tactgtggtt ttagaagaaa ttttgcataa
     1861 aaatttgttt gaatgaaata attatgagtt aaatttttac gtgattttta ctttagaatt
     1921 tattgcaaaa atgatattta aattttaaat ttaggtatag ttatattaat ttaattttaa
     1981 aactaggagc aaaaataatg aaaaagattt taacaagtgc tttggcttta ggagctatga
     2041 ctttgattgt agattgtggc gatggcgatt tagtcgagtt aaaaaacaat ggcaacgatc
     2101 aagctatgtt tgatttaggt aatcaagaga ttatgaaaaa atatccaaat tataaacttt
     2161 atgattatac ttcagtcaga acaattagtg atattaacaa tccagaaggc aaaattaaag
     2221 aaatgaagcg tgatttagaa atagataaaa ctccatactc aaactatgtt ttcttattaa
     2281 atccaaacga taaaaagact ataaagttgt gagtgtttat tgcgataaag attttaagaa
     2341 aagagtttat tattctgtga atgatgctct taggttttat gcaagataat aaaacaagcg
     2401 ggaaaatccc gctatctttc taattttttt ataccgacat tttgcagaaa ttacttattt
     2461 ttaagcctgt tactccgctt ttaaagcaat caaaacgcct tctatcattt ttttgatatc
     2521 cccatcaagg atattatcca cttgagaaaa agcttctccg ctgcgattgt ctttgacttg
     2581 ctgataaggg aaaagcacat aagaacggat ttgatgcccc caacctatct cgcttttttc
     2641 tccagtatta gcactatctt gttgtttcat gagttcaagt tcataaaggc gagattttag
     2701 cattttaaaa gcggtggctt tgtttttgtg ctgacttctg tcattttggc attgtacgac
     2761 tatgccggtt ggaaaatgcg tgattctcac agccgattct gttttattga catgttgtcc
     2821 gcctgcaccg cttgctctgt aataatctat tcttatgtct ttttcttcga tttcaatttc
     2881 tatatcatca tcaagttcag ggcttaccat aacacttgaa aagcttgtat gacggcgtcc
     2941 tgcactatca aaaggagaag ttcttaccaa acgatggata ccattttcag cttttaaata
     3001 accataagca ttttctcctt taactaaaaa gctcacatct ttaagtcctg cttcttcgcc
     3061 ttcttgaaag tctaaagttt cgactttaaa accttctctt tcacaaaatc ttaaatacat
     3121 tctataaagt atgcttgccc agtcattact ttccgttcca cctgcacctg ggtgaatgga
     3181 aacaatggca tttttaccat cattttcccc gcttaaaagc atggaaattt caagacttgt
     3241 gatggtatct tcaagttttg gtgcgtcatt aaataaagct tcaagtgttt ctgtatcgtt
     3301 ttcgctattg gccagatcga aaagttcgct tgcgtcattt agagcattaa aagcattttc
     3361 atagttttta agtagattgg tgattttagt tttttcttta cctatgattc ctgcttgttt
     3421 aacatcactc caaaaagaag gagaattttc aagctcttcg atttctttaa gccttgtttg
     3481 gatattttca ggcttgatga tggaggctat gttgccgact ttgtttttta aagtttttaa
     3541 aagttcgcta aattcgtaat tatccataaa atttctttgc tataattata tttttaaagt
     3601 caaaaattat atcaaaagaa aactttaata taggaaaaaa atgtcaaaac tttatcttat
     3661 gtctttaggt tgtaataaaa atttagtcga tagtgagatc atgctagggc accttagtgc
     3721 ttatgaactt tgcgatgaac caagcaaagc tgatgtttta atcgtaaata cttgtggttt
     3781 tatcgatagt gcaaaaaaag aaagtattaa tgcgattttg gatttgcacg aacaaagaaa
     3841 aaaagattct cttttggtgg ttacgggttg tttgatgcag cgttaccgcg aagaacttat
     3901 gaaagaactt cctgaggttg atcttttcac aggtgtgggt gattatgaaa gaatcgatga
     3961 aatgatactt aaaaaaacaa atttattttc aaattcgact tatttgcaaa gtgaaaattc
     4021 taaacgtatt atcacaggtt caaattccca tgcttttata aaaatcgccg aaggttgtaa
     4081 tcaaaaatgc tctttttgtg ccatcccaag ttttaaaggc aagttaaaat ctcgtgagat
     4141 aagtagcatt atagctgagc ttaaagattt ggtagctaga ggttataagg acttttcttt
     4201 tattgcacaa gatacgagtt cttatttgtt tgataagggt gaaaaagatg ggcttatacg
     4261 cttaatcgat gaggtggaaa aaatcaaagg cataagagcg gctagaattt tatatcttta
     4321 tcctacgagt gcgagtgaag ctttgattaa acgcattata gcttctgaaa tttttataaa
     4381 ttattttgat atgcctttac aacacataag tgataatatg cttaaaatca tgaagcgtgg
     4441 ggcaaatagc acaagactta aagaaatgct aaatttaatg aaaagtgcgc caaatagttt
     4501 tttacgcacg ggctttatcg taggacatcc aggtgagagt gaggcggatt ttgaagagct
     4561 ttgtgagttt gttaaagatt ttggttttga taggataagc gtttttgcgt attctaagga
     4621 agaagatacg gctgcttttg atatggagca agtgcctttt aaagtgatca ataaaaggct
     4681 taaaatcata gaaaaaattg ttgatgaagt catagaaaaa agttttgaaa aagaagtagg
     4741 gcaaaagcgt ttagtagttt gcacaggaaa aagtagcgag ggagagtttt tcatcgcagc
     4801 taaagattta agatgggata gagagattga tggggaaatt cttatcaatg aaagtgaatg
     4861 tggaaattta gaaatggggc aaatttatga atgtgaaatt ttacaaaacc ttgataaaaa
     4921 gctccttgct aaggctttaa gaaaagtaga tgcaaattaa agatgaaatt ttatcccttt
     4981 taaaaagggg taaaaattta ctcgcttttt cttatggaag tgattctagt gtgctttttt
     5041 atcttttaat gcaagaaaag atcgactttg atcttgtgat gataaattac aaaactagaa
     5101 aaaatagtga tttagaagag ttaaaagcca aagaacttgc tttaaaattt cataaaaaaa
     5161 ttttcataaa acacgctcct aaatttcaaa gtaactttga aaaaaaagcc agagattttc
     5221 gctatgattt ttttgaaaaa atttgtcttg agcaaggtta tgaccatctt atcttagccc
     5281 atcatttaaa cgatcaattt gaatggtttt tgatgcaact ttcacgaggc gcaggtttgg
     5341 ctgaaatttt aggtatgcaa gagtgtgaaa aacgctcaaa ttatacactt ttacgccctt
     5401 tactctttat aagtaaagat gaaatttcat cttttttaaa agaaaaagat attttttatt
     5461 tccatgatga aagtaatgaa aatgaaaaat attttagaaa ttatataaga aaaaatttct
     5521 ctaatgcctt tgtgagtgaa tttcatcagg gtttaaaaag aagtttttct tatcttgatg
     5581 aagacaggaa aaaactttat gattttgaaa atatcaaaga aattcaagga cttcttattt
     5641 gccctaaaaa tgaaagcttg attgctagag cggtgaaaat gaaaggtttg cttttaagca
     5701 cggcacaaag aaaagagctt ttaaagggtg attgtgtttt aggtggtaaa atagcacttg
     5761 catataaaaa cgaacaagct attgtttttg agtatgaaac ttgtcaaaaa ttacctaaaa
     5821 atttcaaaga agagtgtaga atagctaaaa ttccaagact tttaagagct tatttatata
     5881 atcataaaat cgatatttca agccttagct tttagtttta aaattctttg atagcttaaa
     5941 tgtgtgagaa aaatcacaaa aaatacttgc aaaaaaagtc ctaaaagtgg tactgatgag
     6001 agtagataaa aacaaagagt gctaaattta aactctaaag gcgaaaaatc ggaatgaaaa
     6061 tttttaaaac tttctttgtc taaaatcgtg cttgtaacat caatcattaa aagtttgtga
     6121 aagagataat aaaaagcaag ataatataca aaaatattta taaaaggtaa aaataaagcc
     6181 aaggtgcaaa gcaataaaat ccctataaat tttataaata ttttaaaaat ttcaaagata
     6241 gtttttaagg ttgaaacttc gtttgtatta tcataatggt aatatttttt gttgatttct
     6301 ttagcgataa aaggagtaag aaaagaagtg ataaaaaggg ctaaaaaaac cgaagcaaaa
     6361 acaacaataa aacctgaaaa taaaaaactt atgatggtga ttaaaatttg tacaaaatga
     6421 agagcataaa accacgccca aaacgaatct tctccaacgc taaataaaga attaaaataa
     6481 tcaagcaagg ccgaaaagcc aagtactcct aaaaaaagca tcagtataag gctaaaaatc
     6541 aaaggaatta aggcaaattt taaaaattta agacttaaaa aatctttgat tgcaagtttt
     6601 aaaatatcca aattatgcct ttttgtagca ttcttctagt tttttataaa tagtatcaaa
     6661 atcaagctct tgttctaaaa tttgagctaa aacttcattg tcttctttgc cattccaagt
     6721 ttttttatag ctgccatctt tgtaaccatt gttttgtcta aaaatattta aaacattttt
     6781 acctatgtag gtcttataaa gaatttcaag atttagccca catttaatag ctagggtaaa
     6841 ataggttgaa agtaattctc caagattaaa tccaaaacca ctgcatttat ggataataag
     6901 ctctatatca tttaaaatgc cataaatatc accctcatta gggtattctt cttctttgca
     6961 aaaatcttga aacacgctta cagcattaac ttctgtggct atagctttga aatctttatt
     7021 gtttttatcg cgatactctt caagtaaaag acttaaaata aaatgccaaa tatcgacaat
     7081 ctctatacgc acattttccc aatttgttag acttgaaata tttttccaat gtttccatgt
     7141 aaaagagtct ataagttctg cacattccat ataaatacag cgtctccaac tgatcagttt
     7201 tccttctttg gtgtagccat tttcccaatt taagccgttt gtttcatcgt tgagtttttg
     7261 ttggagtttg agcatatttt ctaaaatttc gatatttgtc atttaaaaac tccttgataa
     7321 tttttaatat tatatgattt aagcgtaaag atttaaacta tcatctgtct tatcttgatt
     7381 ttccttggct ttttcttgct gtttttcaag ttgttttttc atttgttcta aaacttcatc
     7441 aagaagtttt ttgctatctt caagcatgga agcattgata tctttatcat ctgtttgatt
     7501 ttgttttagt aaatcactga gtttatttgt aaaattattc ataatagcat tttgatggtt
     7561 ttcatcattt ggtgttggta gaacatttgc catttgcata gctgattcta taatttcttt
     7621 tggctttaac tctccgactt tagaatttgc taaaaagtct ttgatcatag gttcaacttc
     7681 tttcatagca tttttaatct catcaagatc attttgtgtg agcttagagc cttcaaaagt
     7741 aaagctaaag ccatactgac gcttaagatt aagagtttta ccttcttcat tatttgcata
     7801 actcacgctt tgattgtcat acatagataa ggctaaatgt ttgccacttt ttgttgtata
     7861 atccatcgaa aaactttggt ttttgctagc atcaatttgc atttcttccc cttatattta
     7921 tagtttaaat taaaaatcgg ttatttttaa aaatatttta gtataatttt tacaatatgg
     7981 atgaaagaat tttagaattt ataaaaaatg agcagctttt atcttgggct atgattgatg
     8041 aaaaaggtgt ttatacagct agtgcttttt atgcttttga tgagaagaat ttagctttta
     8101 ttatcgcttc gcatgaagat actaagcata taagattagc cagtgaaaat tcaagtatag
     8161 cacttaatat agccaaagaa agtaaaatag cttttttaaa aggtgtgcaa gctaaggccg
     8221 agtttaaaat ggcaagcaag gagcaaatga aaatttattt ttctaagttt ccctttgcta
     8281 aatttgataa aagtgcaaaa atttatgctt tagagctttt ttggcttaaa tttactaaca
     8341 atgctttagg acttagtaaa aagcttgaat tttataaaaa ataaattttt atgattttgt
     8401 ttaaaaaaat gagttatgat tatagtttat gtaaaattgt taggtataaa aataaatgtt
     8461 aaatgtaatt tatgctttat tttttagaga gttaaaaact agatttggta aaaatcggta
     8521 tttaggatat atatgggtag ttggggagcc tatgagtatt gtacttttag taactatcat
     8581 aggcactatt gttagagaat atcatcatca agttatgcct gagggaattt ctatttttat
     8641 gtttttgatt tcaggcatta tgcctttttt tatgtttaga agtatagtta cccagcttat
     8701 gaatggaact caggcaaatt tagctctttt tgcctataaa cctgtaaagc ctatacatgt
     8761 atttattgct agaactttac ttgagttttg tatttatttt gtaattttta ttatcatact
     8821 tttttttgcg ggatggtttt ttagacttga tgtatttcct gttcatttgc ttggagtttt
     8881 gttttgtatt tttttgctta tatgttcagc ttttgctttg ggaatttgtt ttgctattat
     8941 ttggcatttt gtggaacctt taagaacttt gctagcttat tttagcatag tgttttattg
     9001 gacttcggga attatatttc ctacttggct aactcctcgt cctttgcttg atatatttta
     9061 ttataatcct ttgcttcata tttttgaact tttaagattt aatttttttg aaaattatcc
     9121 tttgcaagat gaatatagtt atttttatgc tatattttgg attttacttg ttttatttat
     9181 agggcttttt atctattact ataatagaca agctttaacg gcggtaaaaa aagaatgata
     9241 aagttaatta atctaacaaa atcttatcct ttatttagtg gtggaagaca ttatgttttt
     9301 aagaatttta cttttgagtt tcctgaaaat tgtagcatag gtttgatggg gtataatgga
     9361 gcgggtaaat ctactcttat gcgtctttta agcggggcag aacttcctga tagtggtaag
     9421 ataattacta ataaaaaatt atcttggcca ttgggtttaa atggggcttt tcaaggttct
     9481 ttaacagcta gagataatgc taaatttgta gctagagtat atggttataa aggaaaagaa
     9541 ctccaagaaa aagtaaaatt tgtggaagat tttgcagaac ttgggaaatt ttttgatgag
     9601 cctatgaaga cttattcttc gggaatgagt gctaggatag cttttggact tagtatggcc
     9661 tttgattttg attattattt gattgatgaa gcaggagctg ttggagatcc tgcttttagg
     9721 gaaaaaagtg tgaaattata tagagaaaga ttaagcaaat caaaagtgat tatggtatct
     9781 cataatgtag ctgaaattaa agaatggtgt gataaaataa tttatatgaa aaatggacaa
     9841 attacggttt atgatgatgt agatgaagga atagctgtat atcaaggaaa agtttaatgg
     9901 aagaaaataa aactttatta gaaaaaatca aagatttaag tatatttgat tcttttaaaa
     9961 ttgtttggtt tataatgatt tttgttgtga tttattatac attgattgca gcaccaagat
    10021 atgtaagcac gatgatttta gatgttagat caacaagtgg agaaagtgct caaacaagtg
    10081 gaatcttgtc tttgcttagt agtacttcta cagcaagcga agatttaaat tatctaaaag
    10141 gttatataga atcaagtgat atgttaaaga ttttggatga aaaaatcaaa cttaaaaatc
    10201 tttatcaaga gcaacatata gatttacctt ttaaaatttg ggattcaagc tcgatagaat
    10261 cttatcttaa atactaccaa gcaagagtta aggttcatac ggatgaaacc actaaacttt
    10321 taaaagttga agtagagggt tttacaccta aatcagctca tttgattgct caagctatta
    10381 tgcaagaaag cgaaaaattt atcaacgaaa tctctcataa agcagctaga gagcaaatgg
    10441 cttttgctga aaatgaagtg caaaaataca aagaacgtta tcaaaaagca caaaatgatt
    10501 tgattgcttt tcaaaataaa tatggagttt ttgatccttt aaaacaagct gaaactaaag
    10561 caagtttagt tgcgcaaatt gaggctaatt tagctcaaaa agaagctaaa cttttaactt
    10621 tacaaagcta tatgaatgat gcagcacctg aagtagtagc acttaaagca gaaattgaag
    10681 cgattaaaaa acagctttta agggaaaaat ctaaaatttc agctaacaat tcttctcaaa
    10741 agcttaacga tttggctgct aaatttcagg atttaactat agaagctact tttgcgcaaa
    10801 aagcttatga agcagcttta aaagcttatg aaagtgctag aatagaagca ttaagaaaaa
    10861 taaaacaact tgtcatcatc caaagtccag atattccaga aagcgcaaaa tatcctgaaa
    10921 gaatttatga tattttaaca gcatttattg tattatcttt gatttttggg attgttaaat
    10981 ttattaaaat gataatagag gagcataagt attaaaatga aaaaaatatt aattttactt
    11041 tttagttgta ttttatgttt tggagctgtg gatgtttcac aaatcatttc agcagaggat
    11101 caaggttctg ctacaactag catagatcaa aatttaagct caaattatga tatagcaaat
    11161 aaagaaaata atcttacaaa aattcatcaa attttagtat ttggcgctca tctttttaat
    11221 ggaaatttta aaaattacaa tcaaagagtt tataacccag attataagat tgcagttggt
    11281 gatcaaatca gtcttaaaat ttggggagct gttgagtttt cgcaagtttt agtggtggat
    11341 tctcaaggaa atatttttat ccctaaagta ggagctgtaa atttactagg tgtgaaaaat
    11401 agcgcccttg taagtgttat aaaagcacgt gttaataaaa tctataaaag caatgttttt
    11461 gtttatgcag atatgaatgc ttatcaaaat gtcagtgttt ttgtaacagg aaacgttaat
    11521 gctccaggac tttatcaagg acttagttcg gattcagtga tccagtatct tgataaagca
    11581 gggggtataa atttagaata tggaagtttt agagatattc aaattttgcg taataacagc
    11641 gtgataaaaa atattgattt atatgatttt ttactaaagg ggcaaatgga tctttttcct
    11701 tttagaagtg gagatgttat tttagtagga aatgttcaaa attacgcttt tgttaacggt
    11761 gatgtgcaaa gaccttttcg ttttgaactt tcaaatgata ttaaaacttt agctgactta
    11821 gctagagtat caggtgctaa acctatcgta actaatgcta tcgtaaaaag ttatggtgaa
    11881 gatcataaac ttgatgtcag tgcttataat aaaatgcaat tttcaaaagt tttacttaga
    11941 acgggagatg aggtagaatt tcaccctgag tatgtttctg aaaatataac tataagtgta
    12001 aatggcgagc ataatggttt aaaaacttta gttgtgggta aaggaacgac tttagaagat
    12061 atttctaaat taattaaagc taatccacaa tcaaacatgc aagctttaca agtgtttaga
    12121 aaaagtgtag ctagaactca aaaagaactt atcaatgctc agcttaaaga gcttgaaact
    12181 ctagctttaa ctagtggttc tgttacagct caaggtgcag ctataagagc tcaacaagca
    12241 aaaacgattt tagaatttat ccaaagagct aagcaagtag agcctaaggg tcaaattgtc
    12301 attgataatc caaagtctta taattcggtt attttagaag atggtgatac tattaatgta
    12361 ccaagtaaga ataatctcat catagttcaa ggtgaggttt ctttacctgg agcttttgtg
    12421 tatgataagg gcaaagattt aagatattat atcaatcttg caggaggtta tggagaaaga
    12481 gcggatactt caaaagtttt ggtgatacga agcaatggaa aagctgaaaa atatcatagt
    12541 ggtatagata tgaaacgagg cgattctgtg ttggtattgc caaaagtgga tagtgagaat
    12601 ttacaaattt tttcaatgtt gactcaaatt ctttatcaaa ttgctatcgc aaccaatgtt
    12661 gtgcttaatc tttaaggttt aaataatgaa tactcttgaa atagccaaag aagtttttga
    12721 aaaagaagcg caagctattt tggatttggc tacaaattta gatgaaaatt ttaatcaagc
    12781 tgtaaatttg atgttaaata ccaaagggcg ttgcatagtt agtggtatgg gtaaatcagg
    12841 tcatataggc gctaagatag cagctacttt agcaagcaca ggaacaccaa gcttttttat
    12901 ccatccagga gaggctttgc atggagatct tggaatgtta acttccgaag atgttttaat
    12961 tgctatttca aattcaggag aaactgaaga aattttaaaa atcattcctg ctataaaaaa
    13021 gcgtgaaatt ccacttatag taatgtgtgg taaaaaaaat tctacccttg taaagcaagg
    13081 cgatatattt ttaaatatag ccgtggaaaa ggaagcttgt cctttgcagc ttgctcctat
    13141 gtcttcgaca acagcaactt tagttatggg ggatgcttta gcggctgctt tgatgaaggt
    13201 aagaaatttc aagcctgatg attttgccct ttttcatcca gggggaagtt tgggacgtaa
    13261 gcttttaacc aaggtaaaag atcttatggt ttcaagtaac cttcctatag tgcatcctga
    13321 taccgaattt aacgatcttg ttgatgtgat gactagtgga aaactaggac tttgtgtggt
    13381 gcttgaaaat gaaaaattag tgggtattat cactgacggg gatttgcgtc gtgctttaaa
    13441 agcaagcgat aaaccaaggt ttgattttaa ggccaaagaa atcatgagta taaatcctaa
    13501 agtagtcgat gctgatgcta tggcaagtga agcagaaggg atcatgttaa aacataaaat
    13561 caaagaaatt atagtaggaa aagaagaaaa agttgtaggt attatccagc tttatgccat
    13621 aggaaatgtt taatgcctct tttatctgtt attattcctt ttggattaag taaagaacgt
    13681 ccttatatag aagaaagagt tcttcaaaaa gctaaatttt ttcaaagcga tgagaatata
    13741 gaatttattt tcgttgaagg atattcatct aaagatcacg agcttaaaaa ttttatccaa
    13801 gcaaaccatc atatttatct taaagatatg gatcaaaaag ctttttctca aggaagatgt
    13861 aggaatttag gagcaagtta tgcgcattca aatgttcttt tgtttttgga tgtggattgt
    13921 tatatttctt tggataattt tgaaaaaatt ttaaaactaa ttcaaattaa aaatatttct
    13981 caaaatatca atgctttgat agttttaccc gtagtgtatc ttaataaaga agctaatgaa
    14041 aaattaaagc aatacgatga taaattttgg gatattttga tacaagagga tttatttaca
    14101 gcaaaaaata cttgggtaaa attttttgcc ccaagttcta cttcaagtat tgtgataaat
    14161 aaacatcagt ttttaagatt gggcggaaat gatgaaaatt ttatcggaca tggttatgaa
    14221 gattttgatc tttttgctag aattttaaaa gcttgtgtga gttttgaaaa aatgcctact
    14281 aatttaagtt atgatgctag aaattggaat ttttttaact ttaaaggttt tagatcttgg
    14341 ttttcattgc ttggttatga ggcttgtttt tatggaattt atatatatca tttttatcat
    14401 atagaaccca atcaaaacgc ttatatgcaa aataaagata agaaccatca gcttttttat
    14461 aagcatttaa aaaacatcaa aaaacacgat ttaaagcctt tgcaagtttt taaagccaaa
    14521 ggtgaaaaag ttttaatgct ttttaaagat caaaattatg attttaagga tattagtgtt
    14581 tatgtgggag aaattatcta taaaaatata agtgattttt ttatagctaa agagttaaaa
    14641 tatgaacttt tgttggattt tttacaacaa gaaaaaatca ctaaaatatt tttggatgca
    14701 agtataaaac tacaatttaa tggtatagat tattgtgata ttttttattt tcaaaaagga
    14761 attttacctc attcttggtt ttttgcaaaa aaattagatt taggttataa acaagattta
    14821 aatttaagcg agcaaaaact ttatcaagtg aaagaatatt tcttaacttt aaaggaggat
    14881 gaaaaaaaag ttatcttgga ttttttaagc caaaacaatg atgataagta tgatttgtat
    14941 aaaatgcttt attatttgat taacgagctt tatagttttg agcatgatgg gattttttat
    15001 caaatcatca ttgataaaga aaaaatgctg atagcacaaa aacatgataa aagcttttat
    15061 cctttaagat cttttgttta taaaccttat ttgcatgagc ttaagagtat aagacctttt
    15121 tcatttttga tgaaaatttt aggtttagag tatcttggtg ctatgatttc acatactaaa
    15181 ttttatcgct tggcaagaaa attgtttttt aatcctaagg gattttttga ggattttaat
    15241 tataaaataa tgaaaggtaa aatatgaaaa tagtcattgt tggaattggt tatgttgggc
    15301 ttgcaaatgc tatactcttt tcaaaaaata atgaaaatga ggttgtattg ttagatattg
    15361 atgaaaataa aatccaaagt attaataatc ataagtctcc tattaaagat aaattaattg
    15421 aaaagttctt tgtgcaaaat ataagtaaat tacatgctac ttcaaatatc aaagaggctt
    15481 attttaatgc agattttgca gttattgcta ctccaactga ttatgatgaa cagcttaatt
    15541 tttttgatac aagaagtata gagaatgttt taaaagatat aaaaaatata aattctaaga
    15601 tcaatgttat tattaaaagc actgtgccta taggatatac aaaaaccata aaacaaaaat
    15661 ttaatatgtc taatattgtt ttttctccag aatttttacg ggagggaagt gctttatatg
    15721 atagtctata tcccagtaga attattattg gtgataaaag tgttttgggt aaaactattg
    15781 gagatttgtt tttaaaaaat atagagaaaa aaaatgttga tattttttat atggattcgg
    15841 atgaggcaga aagcgttaag cttttttcta atacttactt agcaatgaga gtgggatttt
    15901 ttaatgaagt tgattcgtat gcaagaaaac ataatttaaa ttcagcggat ataattaagg
    15961 gtattagtgc tgatgataga attggaaaat attacaataa ccctagtttt ggatatggtg
    16021 gatattgttt acctaaagat acaaaacagt tgcttgcaaa tttttataat attcctaata
    16081 gtttaattaa agctatagtt gaaactaatg agataagaaa aaaatttata acccagctta
    16141 ttttagaaaa aaaaccaaac attttaggta tttatagatt aattatgaag caaaattctg
    16201 ataattttag aaattctgtg attatagata ttataaaata tttacaagaa tataatagta
    16261 atattgaatt aataatat
//
LOCUS       DAPIVO010000043        16011 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.043, whole genome shotgun sequence.
ACCESSION   DAPIVO010000043 DAPIVO010000000
VERSION     DAPIVO010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16011)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16011)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16011
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.043"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(49..1245)
                     /locus_tag="RJ239_001227"
     CDS             complement(49..1245)
                     /locus_tag="RJ239_001227"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HDV7331349.1"
                     /translation="MYLFTSEVVSAGHPDKCADIIADTIVDILLKNDKNSRVASEVFV
                     AGNKVVIGGEVKSNHKLSKADYDNLVKDVLKNIGYDGAGHFSKEQCLHPDEVDVMVFL
                     NEQSPDINQGVDQEDGETGAGDQGIMFGFASCEAEEYMPAAISYARMLCDRVYAYAKA
                     NPHELGVDIKTQVTIDYGTKANFENCKPQSIHTIVVSAPCVESMKIEDLRSLVMKLIL
                     DSNLPKELFDPNKTRILINPTGKYVNHSSLHDSGLTGRKLIVDSFGGYSPIGGGAQSS
                     KDYTKVDRSGLYAGRWLAKNIVAAGLAKKCIVQLSYAIGVAKPTSVSVDCMGTNTSVN
                     DDVLSDFVMQNFSLTPNWIRDKFHLDKPSKETFLYADVAARGQVGQKDYPWEKLDALE
                     QFKKLL"
     gene            1386..2609
                     /gene="sstT"
                     /locus_tag="RJ239_001228"
     CDS             1386..2609
                     /gene="sstT"
                     /locus_tag="RJ239_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HDV7331350.1"
                     /translation="MFSKIIQSYAKGNLIVQICIGIALGILIGISSKEISEIANLLGI
                     LFTSALKAIAPMLVFILILTSICTKDFSQSGAKIKNIIILYIVGTFFASACAVLANFF
                     FPVKLVLDGVQTATNSSPTHMSDIFKDLLFKIVDNPINALSSGNYLGILTWAIAGGIA
                     LKHCSNEAKQVFIDINEGVLKIVKFVVKLAPFGIFGLVANSVAQTGAQGLLSYVKLLI
                     LLVATMLFVTFVINALIVFFYTRKNPFPLIFICLRHSAFFAFFTRSSAANIPVNMALC
                     AKLGIDKEFYGISIPLGATINMAGAAVTIAILSLTAANTVGIEISLLQAFLLSIIATF
                     AACGASGVAGGSLLLIPLACSLFNIDYDIAMKVVAIGFIIGVIQDSVETALNSSTDVL
                     FTAICSKNELNYNIK"
     gene            2619..3506
                     /locus_tag="RJ239_001229"
     CDS             2619..3506
                     /locus_tag="RJ239_001229"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HDV7331351.1"
                     /translation="MRHLITTKDFNKVEIMELFKEASDFLDEKPRTFLEGKSITTIFF
                     ENSTRTLSSFESAARRLGARVLRLDVSRSSSSKGETLYDTAANLDAMSPNAIVVRHAN
                     SGVPLILAKHMHCPVVNGGDGKHAHPTQALLDLFTIYNHFQGNVEGKKICIVGDIKNS
                     RVAASNIELLSRFNLDITLVAPPHFMPNTHLKKHYKLDENIIANSDIIMSLRTQTERH
                     NKTVYASLKDYANDFCIQKSLVKDKKLILLHPGPVNRNIDISDEMMSNERTLVLKQVK
                     NGVAIRMAVLKKLILENEG"
     gene            3510..5231
                     /locus_tag="RJ239_001230"
     CDS             3510..5231
                     /locus_tag="RJ239_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HDV7331352.1"
                     /translation="MLEWDLSALFHDKEALQNFTQDQIQQSLNFKKNYENKLYTLNAN
                     EFLQALKDYENLNQALGKMMTYAYLLFAKNTQNGSFYAQYEEECKKIEENLLFFELEF
                     CELAPEKSREFTTFCKDYDFYLSNLLQNKRYNLSKNEERIMLYLSNTGANAFSRLFDE
                     SMSALKIPFEGKKLSEEEILSKMYDENRKIRKKAAKKFSKVLQKNSRLLSFIINMIKT
                     ERKNISLLRGYENAEISRHISNQISQKSVDSLIASAQKHFNLVSQFYKRKKQILGYDE
                     LKDYDRYAPIGKEASFDFKTSKNIVLEAFQAFSPQFYDIAKNAFDQGWIDVYPQENKQ
                     GGAFSHSATSDAHPFVLLNYTNKRRDLFTLAHELGHTIHQKLSYNVSYLNQNTPLTTA
                     ETASVFAEMLVFDFIKDKLKKEELLSLYANKIEDIFATFYRQINFTCFERRLHAQENE
                     LSTEEINKIWMEESQKMFQDSVKLTKNYASWWSYIPHFIHSPFYCYAYAYAQLLVLAL
                     YGLYKSKKCENFKELYIKMLSLGGSVSPKELVGMFGFDIEDENFWEIGIKEIQKLINE
                     FMELQSC"
     gene            5225..5662
                     /locus_tag="RJ239_001231"
     CDS             5225..5662
                     /locus_tag="RJ239_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331353.1"
                     /translation="MLETILKNENFIHTMQKHCYEVISHLIEENIEFSIVANTNFIDF
                     NPELPKELDIKQNPYALFALGGYTFESIQLNKDFIQFHAGFGNDDFDSFVKVDLGAIT
                     QIQVENSILFVNFSLYKREDSKNLQKSKNIFLNNPKNKDIFKK"
     gene            5659..7734
                     /locus_tag="RJ239_001232"
     CDS             5659..7734
                     /locus_tag="RJ239_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HDV7331354.1"
                     /translation="MNLFEDLNDSQKQAVSHIDGAMLILAGAGSGKTKTITTRLAYLI
                     GEVGIPSHNTLTLTFTNKAASVMRHRALNFLQGNHNPLLCTFHKFGLLFLKLHFERLE
                     RKNSFIVIDTDDTKKIIKDLIHDKNKDNVYDIIQYISYCKNEGKRVSNVFEDLNLLKE
                     HNFEKYQNEYKFANYYRAYEEYLLKQNFVDFDDLLLLSNLILENDINFAKEQSLLYNY
                     ITVDEYQDTNTLQYKILKNLCCMHENITVVGDDDQSIYSWRGAKIENILNFQNDFKNV
                     KLVKLEQNYRSVGTILQAANNLISHNEQRLGKTLICTKDTGENIKILKNENEKDEGLY
                     IAQEVKKLLNSGVEAKEIAILFRVNALSRAIEEAFMKKQISYKLLSGMRFYERLEIKD
                     LISYLRLILNPSDDLSFKRIINRPKRSIGEKALKNLEEYAKKRQISLFDALCESDGGV
                     GILTTKKAQNEANIFIQNIHTLKSYDNAKKVFDNIEELFKIKDYFSEQDDGDERIRNL
                     DEFYANLREKLKEDPKASLEDLLSEISLLSDQDNLDEECVCLMSIHASKGLEFDYVFI
                     IGFDEGFFPLNSEENLEEERRLAYVGITRAKKFLTISVANSRFYHGSRANINPSRFLE
                     ESKLINEKSKNQNIQKTSFCKGDLVKHKIFGIGRVVEVNKSGKEEKLNINFGGIMRVI
                     MASFVEKAV"
     gene            7731..8549
                     /gene="truB"
                     /locus_tag="RJ239_001233"
     CDS             7731..8549
                     /gene="truB"
                     /locus_tag="RJ239_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HDV7331355.1"
                     /translation="MNKIFAAFKPKGLSSNAFLSTLKKKYKNKKAGYSGTLDPFAKGV
                     LIVAFGQYTKLFRFLKKTPKTYKATLWLGVYSLSLDDQNIKEIQNIKEFDLANLKQII
                     DQMQGIISYTPPQFSAKRINGTRAYELAKKGIEANLKPCQMEVFDCKILSYNHPFLNI
                     EITVSEGAYIRSYCELFARKLGINATLSSLERIKEGKFVYNNEKSLNVLKYINLKPNF
                     IKDLNKLENGAKIFVEELEFHDEGDYYIETEKYFSIINIKENTVKYLLNKVEKC"
     gene            8543..8770
                     /gene="csrA"
                     /locus_tag="RJ239_001234"
     CDS             8543..8770
                     /gene="csrA"
                     /locus_tag="RJ239_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HDV7331356.1"
                     /translation="MLILSRKENESIIIGEGIEIKVVQTGKGYAKIGIEAPKSLMILR
                     KELVQQVKDENLHSVVQNDIKLDDLSKKLIK"
     gene            8767..9534
                     /locus_tag="RJ239_001235"
     CDS             8767..9534
                     /locus_tag="RJ239_001235"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HDV7331357.1"
                     /translation="MKAYAKANIFLKLTGFDSRKYHLLESRFILLKDVFDELELIDKE
                     SDSKKEFEIISNFKCENNIIQKAYLLLSRRYNNELKELFSKKSLKLTKNIPVCAGLGG
                     GSSDCASFLLLINETLNLKLNLQELINLSIQLGSDIAFFLSGFHSANVSSCGEIIEEF
                     EDDIPNLKWTFPQISCQTKAVYDEFDRGIFDFQKNNNQAQIYKKLSTKELLQNFKNKE
                     LNDLFTPCATLYPKMKSYLQEDFFLSGSGSSVFKVDR"
     gene            9531..9983
                     /gene="smpB"
                     /locus_tag="RJ239_001236"
     CDS             9531..9983
                     /gene="smpB"
                     /locus_tag="RJ239_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HDV7331358.1"
                     /translation="MKIIARNKKALFDYSIIERFEAGIVLKGSEVVALRAGRANLKDS
                     FVRIIKNEIFLLNSHISLLHTTHSFYKHKERGARKLLMHRKQIDKLLGKVSIEGYTIV
                     ALDLYFNTKNKVKATLALAKGKNLHDKRETLKKKQADLEARAAMKNYK"
     gene            9994..10596
                     /locus_tag="RJ239_001237"
     CDS             9994..10596
                     /locus_tag="RJ239_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDV7331359.1"
                     /translation="MKKISALFLISLAFFLNACSKEEEIQNDFMFEEYHKGDKIVLNS
                     VNGGSKTLIRTDKGFVVEGEEGKVLMFDFFGTFCTPCKEEALDLSKLWKNNSSKFIII
                     GLTHFEDVSDETVKKFAGDYGAYYFLSNGSSNDRIIAQILKDIDYQNMEQLPFKVVLK
                     NGIYQKISDYWNNNTPTNFYLGKIPTELMQEDLNKIYKGK"
     gene            10596..10886
                     /locus_tag="RJ239_001238"
     CDS             10596..10886
                     /locus_tag="RJ239_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adaptor ClpS"
                     /protein_id="HDV7331360.1"
                     /translation="MPKTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQN
                     LEKASQTMLEIHHNGSGICGIYTQEIALSKQKKVMDAAKLANFPLQAKVEEE"
     gene            10883..13012
                     /locus_tag="RJ239_001239"
     CDS             10883..13012
                     /locus_tag="RJ239_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDV7331361.1"
                     /translation="MKYQENLQKYLDNAKNLSLINHHEFVTCEHVLFALLKLSTDFKD
                     IFEEFSDGDLELLETELKNYISQNNQVIKQEIEPTISVVLDEILLSSKNKNNEIKIID
                     FLEKLIQDSRSYSSYLLKKHNINLNKIQELQNHENIQNLNNHTSDLTLLAQNGKIDPL
                     IGRKFELERMMQILSRRKKNNPILVGEAGVGKTAIVEGLALAIAEKKVPKNLQNAKIF
                     SLDMASILAGTKYRGDFEKRIKEILSELEKIPNAILFIDEIHTIVGAGSTGESHTDFS
                     NLLKPALSNGTLKCIGATTFMEYKNTFDKNKPLSRRFAKINVDEPSQEESLQILKGLK
                     NKYEEFHHIKLNDEILQYAVIWGKKFFNDKFLPDSAIDLIDELGASFALNPRAKKNAN
                     LKDLENVLAKMTHHHKMFEFDQNKALMNLKTNLKAKIFGQDEVIDSLVSSLKQSFAGF
                     KNSNTPRGVFLFTGSSGVGKTELCKALAEFLGLNLERFDMSEYAEKHAISKLIGSPAG
                     YIGFEEGGLLSNAIRKNPFSLVLFDEIEKAHPDLSNTFLQIFDNAELTDNSGLKVDFK
                     NTIIIMTSNLGLKESNELGFLSKNEEKSNRAIKDFFAPEFINRIDKILHFNDLNDAIL
                     VKIIEKELDEISKNLNNIKLSVDDKAKIYLAKKAYNKEFGVRLLKRIISEEIGEKISD
                     EILFGKLKKGGIAKIKLGKNEKLEFIF"
     gene            12987..13634
                     /locus_tag="RJ239_001240"
     CDS             12987..13634
                     /locus_tag="RJ239_001240"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HDV7331362.1"
                     /translation="MKSSNLYSKLLNAPKNAPVFLSQNLEADFIVKAYTFGLFPWTSK
                     PVTWWCPDPRCILIPNQIHIQKNMKKFINLYQIKLDYDFLKLITLCRDTRSQSWIDDE
                     FITTYYKLFTQGYAHSLELYENNELIGGIYGLILGKVFFGESMVSIKKNASKVAMIKL
                     CDLLKPYDFIIDCQVYNQHLEFMGAHNISRKEFLNILKEKCNQESGFKNFKDLIT"
     gene            complement(13656..14945)
                     /gene="cetZ"
                     /locus_tag="RJ239_001241"
     CDS             complement(13656..14945)
                     /gene="cetZ"
                     /locus_tag="RJ239_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy taxis response protein CetZ"
                     /protein_id="HDV7331363.1"
                     /translation="MFGAKKNNTKIIEQLEKKCNGLGDILRSIGNTMAVIEFTTDGVI
                     LEANQNFLTTMKYSLSEIKGKHHSMFCLPEVVNSSAYSDFWKDLRDGKARSGLFRRIA
                     KGGIDVYLEANYLPISDNNGHVYKIIKFANDITQRHYEMLDLRNTIAAANRSMAIIEF
                     KPDGTIITANENFLRTMDFNIDEIKGKHHSMFCDSNYRHSKDYVQFWEDLREGKFQSG
                     KYIRYGRNNKKVYLEASYNPVKNDDGKIYKVIKFATDISEQVKKDQEKLCLISELAEK
                     NDNLTQDGDRVIENTVSNVQNIADMMSQSSNLVSSLNQQSDEIKSIIQTISDIADQTN
                     LLALNAAIEAARAGEHGRGFAVVADEVRNLAERTGHSVNEITTTINSIRNVTSQVVES
                     IKSGLEDVNQSVELAKEARECMEKIRESSAEVAKAMS"
     gene            complement(15026..15652)
                     /locus_tag="RJ239_001242"
     CDS             complement(15026..15652)
                     /locus_tag="RJ239_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HDV7331364.1"
                     /translation="MGSELYLMFFAAITLLAILNPFGNLTQFLAMSDGLPLMLRKKLF
                     RTILYTAFTIVLVFLLSGPLFMNYIFRVSLDDLRVSGGLVLIIMAIKNLLFSTKIATK
                     DFSSYQDMDDKEILRQSLIPMAFPMLVGPGTLASVIVIAEDGGLDVALGGVMIAFIFM
                     FILFHFAATIEKIVGKLILHVFSRIAQVFIVAMGFKMIIVGLKDIFNL"
     gene            complement(15667..>16011)
                     /locus_tag="RJ239_001243"
     CDS             complement(15667..>16011)
                     /locus_tag="RJ239_001243"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine-R-sulfoxide reductase"
                     /protein_id="HDV7331365.1"
                     /translation="EEEKKVILNKGTEAPFSGKYNDFYEKGIYQCKQCGASLYKSEDK
                     FKSGCGWPSFDDEIKGAVKRIPDKDGIRTEIVCANCNGHLGHVFEGEGFSAKNVRHCV
                     NSISLEFVKTKD"
BASE COUNT         5993 a         2441 c         2353 g         5224 t
ORIGIN      
        1 ttataattat acaagccttg tttaagcttg tataatattg ttaatttttt aaagtagctt
       61 tttaaactgt tctagagcat caagtttttc ccaaggatag tccttttgtc ctacttgccc
      121 acgagctgct acatccgcat aaagaaaagt ttctttactt ggtttatcca gatgaaattt
      181 atcacggatc caatttggcg ttaaagagaa attttgcatt acaaaatcac ttaaaacatc
      241 gtcatttaca ctggtatttg tgcccataca atccacgctt accgaagtag gttttgcaac
      301 acctatagca taactaagtt gaactataca ttttttagca agccctgctg caactatgtt
      361 tttagctaac catctacctg cataaagtcc acttctatca actttagtat aatctttgct
      421 cgattgtgcg ccaccaccta ttggagaata acctccaaaa ctatctacta taagttttct
      481 tcctgttaaa ccactatcat gtaaagaaga atgattaaca tatttaccag ttggattgat
      541 taaaattcta gtcttattag gatcaaaaag ttcttttggt aaattactat ctaagataag
      601 tttcatcact aaagatctta aatcttctat tttcatactt tcaacacaag gtgcagaaac
      661 tactatagta tgaatacttt gcggtttaca attttcaaaa ttcgccttag tgccataatc
      721 tatagtcact tgagttttaa tatccactcc aagttcatgt ggatttgctt ttgcataagc
      781 ataaactcta tcacatagca ttcttgcata actaatagct gctggcatat attcctcagc
      841 ttcacaactt gcaaaaccaa acataatgcc ttgatcacct gctcctgttt cgccatcttc
      901 ttgatcgaca ccttggttga tatcagggct ttgttcattt aaaaacacca taacatcaac
      961 ctcatcagga tgtaaacact gctctttgct aaaatggcct gctccgtcat aaccaatgtt
     1021 ttttaaaaca tctttaacta aattatcgta atcagcttta ctaagtttgt gatttgactt
     1081 aacttcgcct cctatcacaa ccttatttcc tgcgacaaaa acctcactcg ccacccttga
     1141 atttttgtca tttttcaaga gtatatccac tatcgtatca gcgattatat cagcgcactt
     1201 gtctggatga cctgcactta cgacttctga agtgaataga tacataaaaa gtcctttcat
     1261 ttaaaatgaa ccacaattgt atccaaataa acttatcaaa gcttgataaa ttaaaaattc
     1321 tctaaaatta agcaaaagtt agttaaaatc aacttttgat ataaaaaata tttaataagg
     1381 tttttatgtt ttctaaaatc attcaaagct acgctaaagg caacctcata gttcaaattt
     1441 gcataggtat agcactagga atacttatag gcattagctc taaagaaata tctgaaattg
     1501 caaatttact tggaatactt tttacaagtg ccttaaaagc tatcgctcct atgcttgttt
     1561 ttattttaat tttaacctca atttgcacta aagatttttc tcaaagtggt gctaagatca
     1621 aaaatattat cattttatat atagtaggca ccttttttgc ttcagcttgt gcagttcttg
     1681 ctaatttttt cttccctgta aagcttgttt tagatggagt tcaaactgct acaaactcat
     1741 ctccaaccca catgagtgat attttcaaag atcttttatt taaaattgtc gataatccca
     1801 taaatgctct ttcaagcgga aattatttag gaattttaac ttgggcaata gctggaggta
     1861 tagcattaaa acactgttct aacgaagcaa aacaagtttt tatagatatc aatgaagggg
     1921 ttttaaaaat cgttaaattt gtagtaaaac ttgccccttt tggaattttt ggacttgtgg
     1981 ctaattctgt agcacaaaca ggagcacaag gtttgctaag ctatgtaaaa cttttaattt
     2041 tacttgtagc tactatgctt tttgttactt ttgttatcaa tgccttaata gtcttttttt
     2101 atacaagaaa aaatcctttt cctttaattt ttatctgctt aaggcacagt gcattttttg
     2161 ccttttttac aagaagttca gcggcaaata ttcctgtaaa tatggcactt tgcgctaaac
     2221 ttggcataga taaagaattt tatggcattt ctataccttt aggagctact atcaacatgg
     2281 caggagcagc agttactata gctattttaa gtcttactgc agccaatacc gttggtatag
     2341 aaatcagtct tttacaagcc tttttattaa gcattattgc cacctttgca gcttgtgggg
     2401 ctagcggagt tgcgggcgga tctttactgc ttataccttt ggcttgttct ttatttaata
     2461 tagactatga tattgctatg aaggtagttg ccataggttt tattataggg gttattcaag
     2521 atagtgttga aactgcttta aatagttcta cagatgttct ttttacagca atttgttcta
     2581 aaaatgaatt aaattacaat atcaaataag gtaaaaacat gcgtcatctc atcactacaa
     2641 aggattttaa taaagtcgaa attatggagc tttttaaaga agcaagtgat ttcttagatg
     2701 aaaaacctag gacttttctt gaaggaaaaa gcatcacgac aatttttttt gaaaactcta
     2761 cacgcaccct ttcatctttt gaaagcgctg caagaagatt aggtgctagg gttttacgcc
     2821 ttgatgtttc aagatcaagc tctagcaaag gagaaactct ttatgatact gctgctaatt
     2881 tagatgccat gagtcctaat gctattgttg taagacacgc aaactcagga gttcctttga
     2941 tattagcaaa gcatatgcat tgtccagttg ttaatggagg agatggaaaa cacgcccatc
     3001 ctacccaagc tttactcgat ttgtttacga tttataatca ttttcaaggt aatgttgaag
     3061 gtaagaaaat ttgcatcgta ggtgatatca aaaattcccg cgttgcagcg tccaatatag
     3121 agcttttaag tagatttaat cttgatatta ccctagtagc tccaccacat tttatgccta
     3181 atacccatct taaaaaacat tataagcttg atgagaatat catagcaaat tcagatatta
     3241 tcatgagtct tagaacacaa acagaaagac ataataaaac cgtttatgct tcacttaaag
     3301 actatgcaaa tgatttttgc attcaaaaaa gcttagtaaa ggataaaaag cttattttac
     3361 tacatccagg ccctgtaaat cgcaatattg acataagcga tgaaatgatg agcaatgaaa
     3421 ggactttagt tttaaaacaa gttaaaaatg gagtggctat tagaatggct gttcttaaaa
     3481 aactcatact agaaaatgaa ggataaaaaa tgttagaatg ggatttaagt gctttatttc
     3541 acgataaaga agcattgcaa aattttacac aagaccaaat ccaacaaagt ttaaatttta
     3601 aaaaaaacta tgaaaataaa ctttatacat taaatgctaa tgagttttta caagctttaa
     3661 aagattatga aaatttaaat caagcccttg gcaaaatgat gacttatgct tatttgcttt
     3721 ttgctaaaaa cactcaaaat ggttcttttt atgcacaata cgaagaagaa tgcaaaaaaa
     3781 tagaagaaaa tttactcttt ttcgagcttg aattttgcga gttagctcct gagaaaagtc
     3841 gagaatttac aactttttgc aaagattatg atttttatct ttctaattta ttgcaaaaca
     3901 aacgctataa tcttagcaaa aacgaagaac gcattatgct ttatctttcc aatacaggtg
     3961 caaatgcttt tagtagactt tttgatgaaa gtatgagtgc tttaaaaatc ccttttgaag
     4021 gtaaaaaact tagcgaagaa gaaattctaa gcaaaatgta tgatgaaaat agaaagatac
     4081 gcaaaaaagc tgctaaaaaa ttcagtaaag tcttacaaaa aaatagcaga cttttaagtt
     4141 ttattatcaa tatgataaaa acagaaagaa aaaatataag cttattaaga ggttatgaaa
     4201 atgctgaaat ttcaagacat atcagcaatc aaatttcaca aaaaagcgtt gattctttga
     4261 tagcaagtgc gcaaaaacat tttaacttag tatcgcaatt ttacaaaaga aaaaaacaaa
     4321 ttttaggcta tgatgagctt aaagactatg acagatatgc acccatagga aaagaagcaa
     4381 gttttgattt taaaacaagt aaaaatattg ttttagaggc atttcaagct ttttctcctc
     4441 aattttatga tatagcaaaa aatgcttttg atcaaggttg gattgatgtt tatccgcaag
     4501 aaaataaaca agggggtgct ttttcgcatt ctgcaacttc tgatgcacat ccttttgttt
     4561 tattaaacta caccaataaa agacgcgatc tttttacact tgcacatgaa ttaggacaca
     4621 ctatccatca aaaactttct tataatgtaa gctatttaaa tcaaaataca cctttaacca
     4681 ccgcagaaac agcttcagtt tttgctgaaa tgctcgtatt tgattttatt aaagataagt
     4741 taaaaaaaga agaactctta tctttatatg caaataaaat cgaagatatt tttgcaactt
     4801 tttatagaca aattaatttt acttgttttg aaagacgctt acatgctcaa gaaaatgaac
     4861 ttagcactga agaaatcaat aaaatttgga tggaagaatc tcaaaagatg tttcaagaca
     4921 gcgtaaaact tacaaaaaat tatgcttctt ggtggagtta tattcctcat tttatccatt
     4981 ctccttttta ctgctatgct tatgcttatg cacaactttt agttttagct ctttatggac
     5041 tttacaaaag taaaaaatgt gaaaatttta aagaacttta tatcaaaatg ctttctttag
     5101 gtggaagcgt gagtccaaaa gaactagtag gaatgtttgg atttgatata gaagatgaaa
     5161 atttttggga aataggcata aaagaaattc aaaaactcat caatgaattc atggagttac
     5221 aatcatgcta gaaacaatct taaaaaatga aaattttatc cataccatgc aaaagcattg
     5281 ttatgaagtt atttcacacc ttatagaaga aaatatagaa ttttccatag ttgcaaatac
     5341 aaatttcata gattttaacc ctgaacttcc caaagagctt gatattaaac aaaatcctta
     5401 tgctcttttt gctcttggag gatacacctt tgaatccata caactaaata aagatttcat
     5461 tcaatttcac gcaggttttg gaaatgatga ttttgatagt tttgtaaagg ttgatttagg
     5521 agctatcacg caaattcaag tagaaaatag cattttattc gttaatttta gtctttataa
     5581 acgtgaagat agcaaaaatt tacaaaaatc taaaaatata tttttaaata atccaaaaaa
     5641 taaagatatt ttcaaaaaat gaatctattt gaagatttaa atgatagtca aaaacaagcg
     5701 gtaagccaca ttgatggagc catgcttatc ctagcaggcg caggtagtgg aaaaaccaaa
     5761 actatcacca ctcgtcttgc ttatcttatc ggtgaagtag gcatcccctc acataacact
     5821 cttactctta cttttacaaa taaagcagct agtgttatgc gtcatagagc attaaatttt
     5881 ctacaaggca atcacaatcc tttgctttgc acctttcata aatttggact tttattttta
     5941 aaactccatt ttgaaagatt ggagcgtaaa aatagtttta ttgttatcga tacagatgat
     6001 acaaaaaaaa taattaaaga cttaatccat gataaaaaca aagataatgt ctatgatatt
     6061 atccaataca tatcttattg caaaaatgaa ggcaaaagag taagcaatgt ctttgaagat
     6121 ttaaatttac taaaagaaca taattttgaa aaatatcaaa atgaatacaa atttgccaac
     6181 tattaccgtg cttatgaaga atacttatta aaacaaaatt ttgtagattt tgatgatctt
     6241 ttattgctaa gcaatctcat tttagaaaat gatataaatt ttgccaaaga acaaagctta
     6301 ctttataatt acattacagt tgatgagtat caagatacta ataccttgca atataaaatt
     6361 ctaaaaaatc tatgttgtat gcatgaaaat atcacagttg ttggtgatga tgatcaaagt
     6421 atttatagtt ggcgtggagc aaaaattgaa aatattttaa attttcaaaa tgattttaaa
     6481 aatgttaaac ttgtaaaact tgaacaaaac tatcgttcag tagggactat tttacaagca
     6541 gcaaataatc tcatatctca caatgagcaa cgacttggaa aaactttaat ctgcactaaa
     6601 gatactgggg aaaatattaa aatattaaaa aacgaaaacg aaaaagatga aggtttatat
     6661 atcgctcaag aagtgaaaaa attgctaaat tctggagtag aagctaaaga gatcgccatt
     6721 ttatttcgag ttaatgcact atcaagagca atagaagaag catttatgaa gaaacaaatt
     6781 tcttataaac tacttagtgg tatgcgtttt tatgagagat tagaaataaa agatttaatc
     6841 tcgtatctta gacttatctt aaatccaagc gatgatttgt cgtttaaacg tattattaat
     6901 cgccccaaaa gatccatagg agaaaaagcc ctaaaaaatt tagaagaata tgcaaaaaaa
     6961 cgtcaaattt cactttttga tgccctatgc gaaagcgatg gtggtgtagg aattttaaca
     7021 acaaaaaaag cacaaaatga agcaaatatt tttatacaaa atattcacac tctaaaaagc
     7081 tacgataatg caaaaaaggt ttttgacaat atagaagaat tatttaaaat caaagattat
     7141 ttttcagagc aagatgatgg agatgaaaga atcagaaatc ttgatgagtt ttatgctaat
     7201 ctaagagaaa aactcaaaga agatcccaaa gcttctttag aagatctact tagtgaaatt
     7261 tctttattaa gcgatcaaga taatttagat gaagaatgtg tttgcttgat gagtattcat
     7321 gctagcaaag gtttggaatt tgattatgtt tttataatag gctttgatga aggatttttt
     7381 cctttaaata gcgaagaaaa tctcgaagaa gaacgccgtc ttgcttatgt tggcatcact
     7441 cgcgccaaga aatttctcac aataagtgtt gcaaattctc gtttttatca tggttcaaga
     7501 gcaaatatca atcctagtcg cttcttagaa gaaagtaaat taatcaatga aaaatcaaaa
     7561 aatcaaaata tacaaaaaac tagtttttgc aaaggagatc tagttaaaca taaaattttt
     7621 ggcattggca gggttgttga agttaataaa agcggaaaag aggaaaagct taatattaat
     7681 tttggtggta taatgcgtgt aatcatggca agctttgtgg aaaaagcagt atgaacaaga
     7741 tctttgcagc ctttaaacca aagggtttga gttctaatgc ctttttaagt actttaaaga
     7801 aaaaatataa aaataaaaaa gcaggatatt ctggcactct tgatcctttc gccaaagggg
     7861 ttttaatcgt tgcatttgga caatacacaa aacttttccg ttttttaaaa aaaaccccaa
     7921 aaacctataa agctacttta tggcttggag tttactcctt aagtcttgat gatcaaaata
     7981 taaaagaaat tcaaaatata aaagaatttg atcttgcaaa tttaaaacaa atcattgatc
     8041 aaatgcaagg aattatctcc tatacaccac ctcaatttag cgccaaaaga atcaatggaa
     8101 ctcgcgccta tgaacttgca aaaaaaggta tagaagcaaa tttaaaacct tgtcaaatgg
     8161 aagtatttga ttgtaagatc ttaagctata atcatccttt tttaaatatt gaaatcacag
     8221 tcagtgaagg tgcttacata agatcttatt gtgaactttt tgctagaaaa ctaggtatta
     8281 atgcgacttt aagctcttta gagcgcatta aagaaggcaa atttgtttat aataatgaga
     8341 aaagcttaaa tgtgttaaaa tacattaacc taaagccaaa ttttatcaag gatttaaata
     8401 aactcgaaaa tggtgctaaa atttttgtcg aagaattaga atttcatgat gaaggagatt
     8461 attatattga aacagaaaaa tattttagca taattaatat taaagaaaat acagtaaaat
     8521 atcttctaaa taaggttgaa aaatgttaat attatcaaga aaagaaaatg aaagtataat
     8581 tatcggagaa ggtatagaaa tcaaagtcgt tcaaacaggg aaaggatatg ccaaaatagg
     8641 tatagaagct ccaaaatccc ttatgatact tagaaaagaa cttgttcaac aagtaaagga
     8701 tgaaaatttg cattctgttg ttcagaatga tattaaactt gatgacttaa gcaaaaaact
     8761 aatcaaatga aagcttacgc taaagcaaat atttttttaa aacttaccgg ttttgactca
     8821 agaaaatatc atcttttaga atcacgattt atacttttaa aagatgtttt tgatgagctt
     8881 gagcttattg ataaagaatc agattctaaa aaagaatttg aaatcattag taattttaaa
     8941 tgcgaaaata atattattca aaaggcttat ttgctacttt ctagaagata taataacgaa
     9001 ttaaaagaat tatttagcaa aaaaagtcta aaactcacaa aaaatatccc agtatgtgct
     9061 gggcttggtg gtggaagtag cgattgtgcg agttttttac tactaataaa tgaaacccta
     9121 aatttaaaat taaacctaca agaacttata aatttaagca tacaactagg aagtgatatt
     9181 gccttttttt taagtggctt tcactctgct aatgtaagta gctgtggcga aattatagaa
     9241 gaatttgaag atgacatacc taatttaaaa tggacttttc cacaaatatc ttgccaaact
     9301 aaagctgttt atgatgaatt tgatagagga atatttgact ttcaaaaaaa caataatcaa
     9361 gcgcaaatct acaaaaaact cagcacaaaa gagttgttac aaaactttaa aaacaaagaa
     9421 ttaaatgatt tatttactcc ttgtgcaact ttatatccta aaatgaagtc ttacttgcaa
     9481 gaagattttt ttctaagcgg tagcggtagt agtgttttta aggttgatcg atgaaaatta
     9541 ttgcgagaaa taaaaaagct ttatttgatt atagcatcat agaacgcttt gaagccggaa
     9601 ttgtccttaa aggaagtgaa gttgtagcct taagagcagg aagagcaaat cttaaagact
     9661 cttttgttcg cattataaaa aatgagattt ttttacttaa ttctcatatt tcattgcttc
     9721 atactacaca ttctttctat aaacacaaag aaagaggtgc tagaaagctt ttaatgcata
     9781 gaaagcaaat tgataaatta ttaggtaaag taagtataga aggatatact atcgttgcat
     9841 tagatcttta ttttaacaca aaaaataaag taaaagctac ccttgcttta gctaaaggga
     9901 aaaatttgca cgacaagcgt gaaactttaa agaaaaagca agccgattta gaagctagag
     9961 ctgctatgaa aaattacaaa taaaggaaaa taaatgaaaa aaatttcagc cctattttta
    10021 ataagtttag cattttttct taatgcttgc tccaaggaag aagaaattca aaatgatttt
    10081 atgtttgaag agtatcacaa aggagataaa atagtcttaa atagtgtaaa tggtggaagc
    10141 aaaactttaa taagaacaga taaaggtttt gtggtggaag gagaggaagg aaaagttcta
    10201 atgtttgatt tttttggcac tttttgcacc ccatgtaaag aagaagcttt agatcttagc
    10261 aaactttgga aaaataattc tagcaaattt atcattatag gacttacaca ttttgaagat
    10321 gttagcgatg aaacagttaa aaaattcgcg ggtgattatg gtgcttacta ttttctaagc
    10381 aatggcagct ctaatgatcg tattattgct caaattttaa aagatataga ctatcaaaat
    10441 atggagcaac ttccttttaa agttgtttta aaaaatggaa tttatcaaaa aataagcgat
    10501 tactggaata ataatactcc aacaaatttt tatcttggta aaattccaac agaactcatg
    10561 caagaagatt taaataaaat ctacaaagga aaataatgcc aaaaacccaa actctagagc
    10621 aaacaaaact tagtgaacca aaaatgtata aagttatact cttaaatgat gatgtaacaa
    10681 ccatggattt tgtcatagaa attttgatga atatttttca tcaaaacctt gagaaagcaa
    10741 gtcaaacaat gttagaaatt catcacaatg gttctggaat ttgtggcatt tacacccagg
    10801 aaatagctct ttcaaaacaa aaaaaagtta tggatgcggc taaacttgct aattttccac
    10861 tacaagcaaa ggtggaagaa gaatgaaata ccaagaaaat ttacaaaaat atcttgataa
    10921 tgccaaaaat ctaagcttaa taaatcacca tgaatttgtt acctgtgagc atgtactgtt
    10981 tgcattacta aaactaagca ctgattttaa ggatatattt gaagaatttt cagatggaga
    11041 tcttgaactt ctagaaactg aattaaaaaa ttacatttct caaaacaatc aagttattaa
    11101 acaagaaata gaacctacaa tatctgttgt tttagatgaa atcttacttt catctaaaaa
    11161 taaaaataat gaaattaaaa ttatagattt tttagaaaag ctcatacagg attcaagaag
    11221 ttattctagc tatctcttaa aaaaacacaa cataaatctt aacaaaattc aagaacttca
    11281 aaatcatgaa aatatacaaa atttaaacaa ccacacaagt gatttaacac ttttagctca
    11341 aaatggcaaa attgatcctt taataggaag aaaatttgaa cttgaaagaa tgatgcaaat
    11401 tctttcacgt cgcaagaaaa ataatcctat tttagtagga gaagcaggag ttggaaaaac
    11461 agccattgta gagggattag cattggctat tgcggaaaaa aaggtgccta aaaacttaca
    11521 aaatgcaaaa atttttagtc ttgatatggc tagtatactt gcgggaacaa aataccgtgg
    11581 agattttgag aaaagaatta aagaaatttt aagtgaactt gagaaaatac ccaatgctat
    11641 tttatttatt gatgaaattc acactatagt aggagctgga agcacaggag aatctcatac
    11701 tgatttttcc aatcttttaa aaccagctct aagcaatgga actttaaaat gcataggtgc
    11761 aacaactttt atggaatata aaaatacttt tgataaaaat aaacccctaa gtcgccgttt
    11821 tgctaaaata aatgtagatg aaccaagcca agaagaaagc ttgcaaattc ttaaaggatt
    11881 aaaaaacaaa tatgaagaat ttcatcatat caaattaaac gatgaaattc ttcaatatgc
    11941 tgtaatttgg ggtaaaaaat tttttaatga taaattttta cctgatagcg ctatagatct
    12001 gatcgatgaa cttggcgctt cttttgcttt aaatccaaga gctaaaaaaa atgccaattt
    12061 aaaagattta gaaaatgttt tagcaaaaat gacccaccat cacaaaatgt ttgaattcga
    12121 tcaaaataaa gctttaatga acttaaaaac aaatttaaaa gcaaaaattt ttggccaaga
    12181 tgaagttata gatagccttg tttcatcact taagcaaagt ttcgcaggat ttaaaaattc
    12241 caatacacca cgcggagtgt ttttgtttac tggatcaagt ggagttggaa aaacagaact
    12301 ttgcaaagct ttagctgaat ttttaggttt aaatttagaa cgctttgata tgagtgaata
    12361 tgcagaaaaa catgctataa gtaaactaat aggatctcca gctggatata taggttttga
    12421 agagggtgga cttttaagca atgctattcg caaaaatcct ttcagtcttg ttctttttga
    12481 cgaaatagaa aaggctcatc ctgatttaag caataccttt ttacagattt ttgacaatgc
    12541 tgaactcacc gacaatagtg gtcttaaagt agattttaaa aatacaatca ttattatgac
    12601 atctaatcta ggacttaaag aaagcaatga gcttggtttt ttaagtaaaa atgaagaaaa
    12661 aagtaatcgt gctatcaaag acttttttgc tccagaattt attaatcgca ttgataaaat
    12721 tttacatttt aatgatttaa acgatgctat acttgttaaa attatcgaaa aagaacttga
    12781 cgaaatttct aaaaatttaa ataatataaa attatcagtg gatgataaag ctaaaattta
    12841 tttagctaaa aaagcctata ataaagaatt tggagtaagg cttttaaaac gcataatttc
    12901 tgaggaaata ggagaaaaaa tcagtgatga aattttattt ggaaagctta aaaaaggtgg
    12961 tatagctaaa atcaaacttg gtaaaaatga aaagctcgaa tttatattct aaattactca
    13021 atgcgcctaa aaatgctcct gtatttttaa gtcaaaattt agaagctgat tttattgtaa
    13081 aagcttatac ttttggtcta ttcccatgga caagtaaacc tgtaacttgg tggtgtccag
    13141 atcctagatg cattttaatt ccaaatcaaa ttcacatcca aaaaaatatg aaaaaattta
    13201 ttaatctcta tcaaattaaa cttgattatg attttttaaa attaattaca ttatgtcgcg
    13261 atacacgctc tcaaagctgg atagatgatg aatttattac cacttattat aagttattta
    13321 cccaaggcta tgcgcatagc cttgaacttt atgaaaataa tgaacttata ggtggaattt
    13381 atggtttaat tttaggcaag gttttctttg gtgaaagcat ggtaagcatt aaaaaaaatg
    13441 catctaaagt tgccatgatt aaactttgtg atttattaaa accttatgat tttatcatag
    13501 attgtcaagt ttataaccaa catttagaat ttatgggtgc tcataatatt tctaggaaag
    13561 aatttttaaa tattttaaaa gaaaaatgca atcaagaaag tggttttaaa aattttaaag
    13621 atttaattac ttaaaaataa gcgtgaaaat cacgcttatg acatcgcttt agcaacttca
    13681 gcagagcttt cacgaatttt ctccatacac tctcttgctt cttttgcaag ttcaacactc
    13741 tgattaacat cctctaaacc gcttttaata ctctcaacca cttgtgatgt aacattgcga
    13801 atagaattaa tcgtagtggt aatttcatta accgaatgcc ctgttctttc agctaaattt
    13861 cttacttcat cagcaacaac agcaaaacct ctaccatgtt caccagcacg tgctgcctca
    13921 atagcagcat ttaaagcaag cagattagtc tgatcagcaa tatcactaat agtttgaata
    13981 atagatttaa tttcatctga ttgttgattt aatgaggaaa caagatttga actttgagac
    14041 atcatatcag caatattctg aacatttgaa acagtgtttt caattacacg atctccatct
    14101 tgagtaagat tatcattttt ttctgcaagt tcgcttatga ggcaaagttt ttcttgatct
    14161 tttttaactt gttcgcttat atctgtagca aatttaataa ccttgtaaat ttttccatca
    14221 tcatttttaa ccggattata acttgcttca aggtatactt ttttattatt tcttccgtat
    14281 cttatatatt tacctgattg aaatttgccc tctcttaaat cttcccaaaa ttgaacatag
    14341 tccttagagt gtctataatt agaatcacag aacatgctat gatgctttcc tttaatctca
    14401 tcaatattaa aatccatagt tcttaaaaaa ttttcattag ccgtaataat agtcccatca
    14461 ggtttaaatt caataatagc catagaacga ttagcagcag caatagtatt tctaagatca
    14521 agcatttcat aatgtctttg agttatatca ttggcaaatt taataatttt ataaacatga
    14581 ccattattat cactaattgg aagataattt gcttctaaat aaacatctat ccctccctta
    14641 gctatacgtc taaaaagacc acttctagct tttccatctc ttaaatcttt ccaaaaatca
    14701 ctatatgctg aagaattaac aacttcaggc aaacaaaaca tactatgatg cttacccttg
    14761 atctctgaaa gggagtattt catagttgtt aaaaaatttt gatttgcctc taaaataacg
    14821 ccatcggtag taaattcaat taccgccatg gtattcccaa tagatcttaa aatatctcct
    14881 aaaccattac attttttttc aagttgttca attattttag tattattttt cttagcacca
    14941 aacataaaac tcaccttttt aataataaat tattttaaaa ttatatcata tttatatagt
    15001 attatttact taaaattata ttaatttata agttaaatat atcctttaaa cctacaataa
    15061 tcatcttaaa ccccatagca acaataaata cttgtgctat acgagaaaaa acatgtaaaa
    15121 tcaattttcc aactattttt tctatagtag ctgcaaaatg aaaaagtata aacataaaaa
    15181 taaaagctat cattactcca ccaagagcaa catcaagccc accatcttcg gctataacaa
    15241 taacgctagc taaagttcca ggcccaacaa gcataggaaa tgccataggt attaaactct
    15301 gtcttaaaat ttccttatca tccatatctt gataagaact aaaatcctta gttgcaattt
    15361 ttgttgaaaa aagtaaattt ttaatagcca ttataataag aaccaaacca ccagaaaccc
    15421 ttaaatcatc caatgaaact ctaaaaatat agttcataaa taaaggtcct gataataaaa
    15481 acaccaaaac tatagtaaaa gctgtataga gaatagttct aaaaagtttt tttcgaagca
    15541 ttaaaggcaa tccatcactc atagccaaaa attgagttaa attaccaaaa ggatttaata
    15601 tagcaagtaa agtaattgca gcaaaaaaca tcaaataaag ctcagaaccc atactagaaa
    15661 acactatcaa tccttagttt ttacaaattc caaagaaata gaatttacac aatgtcttac
    15721 atttttagca gaaaatcctt ctccttcaaa aacatgacct aaatgtccat tgcaatttgc
    15781 acatacaatc tcggttctaa tcccatcttt atcaggaatt cttttaacag ccccttttat
    15841 ttcatcatca aagctaggcc atccacaacc tgatttaaat ttatcttcgg atttataaag
    15901 cgaagctcca cattgcttgc attgatagat tcctttttca taaaaatcat tatatttccc
    15961 actaaaagga gcttctgttc ctttatttaa aattactttt ttttcttctt c
//
LOCUS       DAPIVO010000044        16003 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.044, whole genome shotgun sequence.
ACCESSION   DAPIVO010000044 DAPIVO010000000
VERSION     DAPIVO010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16003)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16003)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16003
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.044"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            68..2053
                     /locus_tag="RJ239_001244"
     CDS             68..2053
                     /locus_tag="RJ239_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family iron permease"
                     /protein_id="HDV7331366.1"
                     /translation="MLKQSIETYKKGDNLGAKKLSEDAYFQHFENMEGSIGRNIGRKA
                     ITMERKFVNLRRMYKDEAPLTQINALIDSLYYDLDEVAPILQNGYRLKAEASDINYDK
                     AKAEKSSLEANAKREADAEALIAQMMGVDKKDLAQSSLTTQAPIPINNDTSKLTDDNA
                     STDLQAAAAMDVRLQFILDNISTKFSQAANAFKEKNYQTSKDFLNDALFSDYRNTKVE
                     ILVNKFTKAGNDQKIQQAIRTLIRQINDAKIDEKGLRDGLDNIEEQIFDVFLQIPNSE
                     LSSLQISGFNDETKGKDYAKVSNDIKLALDEILKNYDGFSASIVDDLQGIYLDIFEAS
                     GMENKIGAVDSGLKLKIESLFSKSVALIKASTDKKELEATFNDLEQLIASSVDKIQDS
                     TPYSLFIWALGIILREGLEALIIVVAIVSYLVQSGNKNRLNIAYSALFTGVILSFVTA
                     FGVSWLFKENAGQSRELIEGITMLIAVLLLFYVGFWLLSNAQNKKWTSFIKQGAIDAI
                     SNNSAKTLWITVFLAVYREGAETVLFYQALLFDAKTSTDFGAVFGGLGLGILILIVLY
                     FLLKAGAIRIPVKQFFYITSYIIFYMVFVFTGKGIAELIEGKVIIPSLIPMNFEPILW
                     LGIYPYYETLIPQFIVLIMLIIGILITKQISKKGVKS"
     gene            2050..2589
                     /locus_tag="RJ239_001245"
     CDS             2050..2589
                     /locus_tag="RJ239_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron transporter"
                     /protein_id="HDV7331367.1"
                     /translation="MIKKVLSVVAAAAVISTNLFAGEVPIGDPKELNGMEIAAVYLQP
                     IEMEPRGIDLAASLADIHLEADIHALKNNPNGFPEGFWMPYLTIAYELKNTDTGAIKR
                     GTLMPMVADDGPHYGANIAMEKDKKGGFGVGNYELTFYISNPEKQGFGRHVDEETGVG
                     KWFEPFKVDYKFKYTGTPK"
     gene            2672..4075
                     /locus_tag="RJ239_001246"
     CDS             2672..4075
                     /locus_tag="RJ239_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2318 domain-containing protein"
                     /protein_id="HDV7331368.1"
                     /translation="MSIYFVHFLISVLPLSILMAFITPNKKYIFKSFFVVFLGFLFGY
                     FAFFIAAQFLKTENLIFNFDFVFIGLLLVSFIFYFWKKIEILNFILLGILSFCTALHY
                     YFLSQDFPIFTSSLIDSEGISSLGFIALALLVCILIFFFLKWQKNFNQKTSFMLFLLL
                     ILIESDKALANILLTLMRNSIIETHAFLVSFVGKSNYFGVFGIYVYLIFITFLAFLSL
                     KIRKKNISKKQILDINYRKNEAKTSLINRYFSSVFISCVVSFCIVLYFFMVSSKPLTI
                     DEPKEILPDKNGKFIFDIALLRDNKLHRFAYISAEGKVIRFFLINKREDKDSPVAVFD
                     ACMICGDMGYIKKDGQLICISCNVRIFLPSVGKSGGCNPIPLKYEYDGNKITIDVKDV
                     IAGSNYFSQIKEIEVQDPVSKTKVINTQAPFSYSYKGVTYYFSNQNNYEEFKKDPTKY
                     VEENEAQFLIQRRNDVG"
     gene            4062..5354
                     /locus_tag="RJ239_001247"
     CDS             4062..5354
                     /locus_tag="RJ239_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7331369.1"
                     /translation="MMLAKMIFNSIFKNKIQKFLAFLTCFLATLLLSTMLNITLSIGD
                     EVTKQLKSYGSNILVLPKGSSLSIEIGNELYEPLKNKNYLEEKNLYMIKDIYWRNNIT
                     ALAPFLEGKITIENSQQKALIYGAYFQKAIKIKDDDDFITGIKSLYPYLAVQGEWAKD
                     DSNEIMLGEDFAKNNKLKLGDTIKLIGENNQSKEAKIVGILLHANPKMSNKIIAPLNL
                     AQDLLNKQGLYSSTEVRAFTIPESALSEKVRRMGEEKLDQLEYDKWYCSAYVGSIASQ
                     ISDGLPGADAKALNAISDAQSLVVKKIQSLMGITCIICLIVASIAISSLMSSEIHRRK
                     KEIGLLKVLGANTFQIYLIFASENLIVALFAALLGFIFGTALSQIISLSIFGYFIDIA
                     FVALPLSFIFAGLIALLGCLLPIKNITQLSAAGVLYGR"
     gene            5344..6462
                     /locus_tag="RJ239_001248"
     CDS             5344..6462
                     /locus_tag="RJ239_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HDV7331370.1"
                     /translation="MVDKFFLNELFKSISFSYQRLFIIVLSVFIGALTCSAFLNIYFD
                     IDIKLSKELKAYGANVMISPKQDENFISNTEYEKIKENLKARALTPFLYDFLNLGSTS
                     GVVLGTDFRALKITKPFLEVKEGSFSLNDFDENSAFLGVNLAKQLGLKAGNELQIYNP
                     NNGKSIKLTIKGILSSNDEFDSIVLAPLSVVQNLSDRAGINYANAVVYGNFDEVKAKT
                     QAISNEFIDAKPISSVSLSEGLVLGKIKALMFLIILVVLIIVTTSVNTTLSSIIFSRK
                     KEIALRLALGAKKSEIFKLFASECFIVSFFASLIGAFCGIFLANVFGYLIFNSSIDFR
                     FIAVFIALIISLIFAFLAAFFPIKRALKINVCENLKGE"
     gene            6459..7112
                     /locus_tag="RJ239_001249"
     CDS             6459..7112
                     /locus_tag="RJ239_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7331371.1"
                     /translation="MMKKELIKINNLNKEFGKVKALNNINLSVYEGEWLAIMGPSGSG
                     KSTLLNILSLMDTPSSGEYILDNENLEQMDEEQKITLRREKIGLVFQQFHLIPYLNAL
                     ENVMLSQYYHSSVDEEDAKMVLEKVGLSHRLTHLPSQLSGGEQQRVCIARALINNPEL
                     LLADEPTGNLDEANEQIVLQTLQKLKNEGKTIVLITHNPDLAKFADRTLILQHGVLK"
     gene            7109..7597
                     /locus_tag="RJ239_001250"
     CDS             7109..7597
                     /locus_tag="RJ239_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDV7331372.1"
                     /translation="MKKSLLILSILFLLNACSFENSKDTGKVGEKSAEISAKDTLGKA
                     VKLADDNTSLKVLVFFQNGCPSCLKELPSLDEFIQNHPNKISVYAINSIDNANVVKVL
                     AEQFDFKNVKVLKDDLKITNDRYAVFATPTTIIIKDGMIKDRILGEKPWEFFESKLIS
                     LL"
     gene            7558..8070
                     /gene="traF"
                     /locus_tag="RJ239_001251"
     CDS             7558..8070
                     /gene="traF"
                     /locus_tag="RJ239_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraF"
                     /protein_id="HDV7331373.1"
                     /translation="MGIFRIQAYFFALIIALFFVACDSGENFKALNSDKTYNFAYNGF
                     EKSLKLNDKAQNFALVFFTKDCGVCKEQIPILQNLAKNYDFNIFVVLGDANDANDAND
                     AKAWADEKGLSNLAMFYEKRAAKYLSSAIGEIYGVPVLSFFKEGKMDEKFIGLTPYSI
                     LEKEIKKVKS"
     gene            complement(8080..8517)
                     /locus_tag="RJ239_001252"
     CDS             complement(8080..8517)
                     /locus_tag="RJ239_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HDV7331374.1"
                     /translation="MKKTILTILFLLTLTQAKEIQIYESPTCGCCDLWADYMKAKGYE
                     VSVHKTNDFLKIKEKMGIKDEYQSCHTGVIEGYAIEGHVPESAIAWLLENKPKDVIGI
                     SAPGMPQGSPGMEQGYSEKYPVILMKKDGSYELYGYFIGDKKL"
     gene            complement(8816..9232)
                     /locus_tag="RJ239_001253"
     CDS             complement(8816..9232)
                     /locus_tag="RJ239_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331375.1"
                     /translation="MKKLGLVLAVLVALNVSAFADLIVINKKDLVPVSASEMQNKYFQ
                     ESIKSTLTEPLFKKATFYEADIVAKVDPRTYNSTQAIIQKEYSDKSNYVYYKQVLILT
                     SDGKRARLYTLSCEIASFDKKGYLCGGTADHNYSIK"
     gene            complement(9407..9491)
                     /locus_tag="RJ239_001254"
     tRNA            complement(9407..9491)
                     /locus_tag="RJ239_001254"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9455..9457),aa:Leu,seq:tag)
     gene            complement(9496..9572)
                     /locus_tag="RJ239_001255"
     tRNA            complement(9496..9572)
                     /locus_tag="RJ239_001255"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9536..9538),aa:Arg,seq:tct)
     gene            complement(9587..9663)
                     /locus_tag="RJ239_001256"
     tRNA            complement(9587..9663)
                     /locus_tag="RJ239_001256"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9627..9629),aa:Arg,seq:tcg)
     gene            complement(9667..9743)
                     /locus_tag="RJ239_001257"
     tRNA            complement(9667..9743)
                     /locus_tag="RJ239_001257"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9707..9709),aa:His,seq:gtg)
     gene            complement(9768..9845)
                     /locus_tag="RJ239_001258"
     tRNA            complement(9768..9845)
                     /locus_tag="RJ239_001258"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9808..9810),aa:Pro,seq:tgg)
     gene            complement(9888..10736)
                     /locus_tag="RJ239_001259"
     CDS             complement(9888..10736)
                     /locus_tag="RJ239_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HDV7331376.1"
                     /translation="MRFVFLICCACLVFANEILLLSKFDKQDFNSKDFNAYLMSEKLD
                     GVRGIWDGKYLKTRQNYKIKTPDFFTKNFPPFAIDGELWIARNKFDEISALIRSGDSN
                     LTLWKEVTYNIFDVPNACEEFQISTCTLKNRLAVLEEYLQKYPSAYIKIISQIPVENQ
                     NNLNQFYESIIKNQGEGIVIRKNLSPYEKGRSKNATKLKPYDDAECELVGFRKGKGKF
                     ENQVGALLCKMPNGQIIKIGSGLKDEDRKNPPKIGSIVTYKFNGLTKNSLPRFPVFLR
                     IRDENP"
     gene            complement(10736..11398)
                     /gene="cgpA"
                     /locus_tag="RJ239_001260"
     CDS             complement(10736..11398)
                     /gene="cgpA"
                     /locus_tag="RJ239_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoprotein CgpA"
                     /protein_id="HDV7331377.1"
                     /translation="MKTRILAIFFIFTSLLYADENPFKTDQNITLVAPPEFQKEEVKF
                     NSSARILKSITFNYINLDGSEDKIDLDVNKSIDWHDTYTISRFKSPDPSKVLDVSVTI
                     PEKNSSKQESNSTANVEIPLQVAKIYDFISYAVYKNKIKLNTSDEMITDFSVGNPSKI
                     VIDFRSKMISPTKNIRLSNSIFKRIDFGSHKGYYRLVIYLDGTYNYNIQKDATGYMIN
                     LL"
     gene            complement(11388..11591)
                     /locus_tag="RJ239_001261"
     CDS             complement(11388..11591)
                     /locus_tag="RJ239_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331378.1"
                     /translation="MIFWAFLVVIGAIYFGNMFFGQYSLDTLLSLENTKEELNKKIIL
                     LKEQNAKAQKDYFELKGLYPNEN"
     gene            complement(11657..12901)
                     /gene="eno"
                     /locus_tag="RJ239_001262"
     CDS             complement(11657..12901)
                     /gene="eno"
                     /locus_tag="RJ239_001262"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HDV7331379.1"
                     /translation="MLVIEDVRAYEVLDSRGNPTVKAEVTLSDGSVGAAIVPSGASTG
                     SKEALELRDNDERFGGKGVLKAVANVNETIADEILGLDAFNQTQLDDTLRELDGTNNY
                     SNLGANATLGVSMATARAAAAALGMPLYRYLGGANASILPVPMCNIINGGAHANNNVD
                     FQEFMIMPFGFTSFKEALRSVCEIYAILKKELANSGHSTALGDEGGFAPNLANNTEPI
                     DLLMTCIKKAGYENRVKIALDVASTEFFKDGKYHMEGKAFSSEALIERYVELCAKYPI
                     CSIEDGLAENDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKPN
                     QIGTITQTMRTVRLAQRNNYKCVMSHRSGESEDAFIADFAVALNTGQIKTGALARGER
                     TAKYNRLLEIEFESDEYLGEKL"
     gene            complement(12901..13932)
                     /gene="recA"
                     /locus_tag="RJ239_001263"
     CDS             complement(12901..13932)
                     /gene="recA"
                     /locus_tag="RJ239_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HDV7331380.1"
                     /translation="MDDNKRKSLDAALKSLDKTFGKGTILRLGDKEVEQIDSIGTGSV
                     GLDLALGIGGVPKGRIIEIYGPESSGKTTLTLHIIAECQKAGGVCAFIDAEHALDVKY
                     AKNLGVNTDDLYVSQPDFGEQALEIVETIARSGAVDLIVVDSVAALTPKAEIEGDMGD
                     QHVGLQARLMSQALRKLTGIVHKMNTTVIFINQIRMKIGAMGYGTPETTTGGNALKFY
                     ASVRLDVRKVATLKQNEEPIGNRVKVKVVKNKVAPPFRQAEFDVMFGEGLSREGELID
                     YGVKLDIVDKSGAWFSYKDKKLGQGRENSKAFLKENPEIADEITKAIQNSMGIEGMIS
                     GSEDDEGEE"
     gene            14038..14898
                     /locus_tag="RJ239_001264"
     CDS             14038..14898
                     /locus_tag="RJ239_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis family protein"
                     /protein_id="HDV7331381.1"
                     /translation="MKKITIAHSPDADDIFMYMAIKFGWIGNDFAYENTALDIQTLNE
                     FALKNEFDATAISFGLYPLIASEYALLRTAVSFGEGYGPKLIKKKDTHLKRNFKVALS
                     GANTTNALIFRMKYPEARIIYKNFLDIENAVLSGEVDAGVLIHESILNFDQSLYVEAE
                     LWDIWLEFAKENLPLPLGGMALRRSLPLSDAIKIERDLTNAVKIADANRKILAPMLME
                     RKLIRVDEEKLDTYLNLYANKNSISMNQTQLLAVDTLFKLGYDYKFYDKIIHVNDFLI
                     PSEYEEARNS"
     gene            14910..15179
                     /gene="fliQ"
                     /locus_tag="RJ239_001265"
     CDS             14910..15179
                     /gene="fliQ"
                     /locus_tag="RJ239_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HDV7331382.1"
                     /translation="MDESTLVALGVQTFKITLLLSLPMLLAGLIAGLVISIFQATTQI
                     NEMTLSFVPKIILVVVILIFLMPWMTTTMIDFTENILNQIPTFIK"
     gene            15176..15952
                     /locus_tag="RJ239_001266"
     CDS             15176..15952
                     /locus_tag="RJ239_001266"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HDV7331383.1"
                     /translation="MIIDFKKYSSVRIGNEFEVLVLDQICDFDGFLIGGANNLLVSPK
                     PKNIGILGDGFNFIQILDRNKDFIHLRIGCKTKSSKMYRFAKENNLKGFEYLSKIPGT
                     LGGLLKMNAGLKGECISQNLIKIATSQGEILRANINFDYRFCPLNTHFFWAEFKLNFG
                     FDTLKDEALKNARSNQPSGASFGSIFKNPKNDFAGRLIEAVGLKGFSKGDAMLSDKHA
                     NFLINKKNASFEDAFFLIELARKKVFEEFGTNLENEVIII"
BASE COUNT         5373 a         2619 c         2529 g         5482 t
ORIGIN      
        1 ttttttatca agctcagctt ttgctagggt agatgattat attaatgaag caaatcttat
       61 caaagatatg ctaaaacaaa gcatagaaac ttataaaaag ggcgataatc taggcgccaa
      121 aaagcttagc gaagatgcgt attttcaaca ttttgaaaat atggaaggct caataggaag
      181 aaacatagga agaaaagcta tcactatgga gcgtaaattt gtaaatttgc gtcgcatgta
      241 taaagatgaa gctcctttga cacaaattaa tgctttaatt gatagtcttt attatgatct
      301 tgatgaagta gctccgattt tacaaaatgg atatcgttta aaagcagaag caagcgatat
      361 aaactatgat aaggctaaag ctgaaaaatc aagcctagaa gccaatgcca aacgcgaagc
      421 tgatgcagaa gctttaatcg cacaaatgat gggtgtagat aaaaaagatt tagcacaaag
      481 ctctttaacc acccaagctc ctatacctat aaataatgat acaagcaaac ttacagatga
      541 taatgcaagc actgatttac aagctgccgc tgcaatggac gtaagattgc aatttatact
      601 agataatatc tctaccaaat tttcacaggc agctaatgct tttaaagaaa aaaactacca
      661 aactagtaaa gattttttaa atgatgcctt atttagtgat tatcgcaata ccaaagtaga
      721 aattttagta aataaattta ccaaagcagg aaacgatcaa aaaattcaac aagccatacg
      781 cacccttata cgccaaatca acgatgcaaa aatagatgaa aaaggcttaa gagatggctt
      841 agataacata gaagaacaaa tttttgatgt tttcttacaa attccaaatt cagaactttc
      901 aagtttgcaa atttcaggct ttaatgatga aacaaaaggc aaagattatg ccaaagtttc
      961 taatgatatc aaacttgctt tagatgaaat tttaaaaaat tatgatgggt ttagtgcttc
     1021 tatagtagat gatttacaag gaatttatct agatattttt gaagcaagcg gtatggaaaa
     1081 taaaatcggt gctgtagata gcggcttaaa acttaaaata gaaagtttat tttccaaaag
     1141 cgtagctctt atcaaagcaa gtacagataa aaaagagctt gaagctactt ttaatgactt
     1201 agaacaactc atagccagca gcgtggataa aattcaagat tctactcctt attcgctgtt
     1261 tatatgggct ttaggtatta ttttgcgtga aggcttggaa gctttgatta tcgttgtagc
     1321 cattgtttct tatcttgtgc aaagtggcaa caaaaatcgt ttaaatatcg cctatagtgc
     1381 tctttttaca ggagtaattt taagttttgt taccgctttt ggagtttctt ggctatttaa
     1441 agaaaatgca ggacaaagta gagagcttat agagggtatt accatgctta tagccgtatt
     1501 actactcttt tatgtgggct tttggctact ttcaaacgca caaaataaaa aatggacaag
     1561 ctttatcaaa caaggtgcta tagatgctat atcaaacaat agtgcaaaaa ccctttggat
     1621 taccgtattt ttagctgttt atagagaagg tgcagaaact gtgctttttt atcaagcctt
     1681 gctttttgat gctaaaacaa gcactgattt tggtgctgtt tttggcggac ttggacttgg
     1741 aattttaata cttattgttt tatattttct tttaaaagca ggagccattc gcatacctgt
     1801 aaaacaattt ttctatatca cttcttacat tattttttac atggtttttg tttttacagg
     1861 caaaggcata gccgaactca tagaaggaaa agtcatcatt cctagtctta tacctatgaa
     1921 ttttgaaccg attttatggc ttggaattta tccttactat gaaactttaa tccctcaatt
     1981 tatagtttta attatgctaa ttattggcat tttaataaca aaacaaattt caaaaaaagg
     2041 agtaaaatca tgataaaaaa agttttatca gtagttgctg cagctgcggt tattagtaca
     2101 aatttatttg caggcgaagt gccgatcggc gatccaaaag aacttaatgg catggaaata
     2161 gccgctgttt atttacaacc tattgaaatg gagccaagag gtattgattt agctgcatct
     2221 ttagcagata ttcacctaga agctgacatt cacgcactta aaaacaatcc aaatggtttt
     2281 ccagaaggtt tttggatgcc ttatttaact atagcttatg aacttaaaaa taccgacaca
     2341 ggtgcaatta aacgtggaac tttgatgcct atggtggctg atgatggtcc tcactatggt
     2401 gcaaatattg ctatggaaaa agataaaaaa ggtggctttg gcgtaggaaa ttatgaactt
     2461 actttttata tctcaaatcc agaaaaacaa ggttttggac gccatgttga tgaagaaaca
     2521 ggtgtgggta agtggtttga accttttaaa gtagattata aattcaaata cacaggcacg
     2581 ccaaaataat tttacgctcg gattttccga gtgtttgaat atttttattt ttatttgaaa
     2641 aattaaaata acaatgttta aagagtaaat tatgagtata tattttgtgc attttcttat
     2701 cagtgtttta ccgctaagta ttttaatggc ctttatcact cctaataaaa aatatatttt
     2761 taaaagtttt ttcgtagttt ttttgggctt tttatttgga tattttgctt tttttatcgc
     2821 agcacaattt ttaaaaaccg aaaatttaat ctttaatttt gattttgttt ttataggttt
     2881 attgctagta agctttatat tttatttttg gaaaaaaatt gaaattttaa attttatttt
     2941 attgggaatt ttaagttttt gcaccgcttt gcattattat tttttaagtc aagatttccc
     3001 tatttttact agctctttaa tcgatagcga aggtataagt tctttaggtt ttattgcttt
     3061 agccttgctt gtttgtattt tgattttctt ctttttaaaa tggcaaaaaa attttaatca
     3121 aaaaacaagc tttatgctgt ttttactgct tatccttata gaaagcgata aagctctagc
     3181 caatatcttg cttactttaa tgcgaaattc catcatagaa actcatgctt ttttggtgag
     3241 ttttgtagga aaaagtaatt attttggtgt ttttggaatt tatgtttatt taattttcat
     3301 cactttttta gcattcttaa gcttaaaaat tcgcaaaaaa aatataagca aaaaacaaat
     3361 tttagatata aattatcgca aaaacgaagc taaaacaagt cttattaatc gctatttttc
     3421 cagtgttttt atctcctgtg ttgtaagttt ttgcattgtt ttatactttt ttatggtaag
     3481 ctctaagcct ttaaccatag atgagcctaa agaaatttta cccgataaga atggcaaatt
     3541 tatctttgat atagctcttt taagggacaa caaactccac cgctttgctt atatcagtgc
     3601 tgaaggcaaa gtgataaggt tttttcttat caacaaaaga gaagataagg attctcctgt
     3661 agctgttttt gatgcttgta tgatttgtgg agatatgggc tatatcaaaa aagatggaca
     3721 actcatttgc atttcttgca atgtgcgtat tttcttgcca agtgtaggta aaagcggggg
     3781 ttgcaatcct atcccactca aatacgaata cgatggtaac aaaatcacca tagatgttaa
     3841 agatgtaata gcaggatcta attattttag tcaaatcaaa gaaattgaag tgcaagatcc
     3901 tgtatcaaaa acaaaggtta taaacaccca agctcctttt tcttatagct ataaaggggt
     3961 tacttattat ttttcaaatc aaaacaacta tgaagaattt aaaaaagatc ctacaaaata
     4021 tgtagaagaa aacgaagccc aatttttaat ccaaaggaga aatgatgttg gctaaaatga
     4081 tttttaactc tatatttaaa aacaaaattc aaaaattttt agcctttctt acttgttttt
     4141 tagccacgct tttgctctct actatgctaa atattaccct aagtataggt gatgaagtaa
     4201 ctaaacaact caaaagctat ggctctaata tccttgtttt acccaaaggc tcaagcctta
     4261 gtatagaaat aggtaatgaa ctttatgaac ccttaaaaaa caaaaactac ctagaagaaa
     4321 aaaatttata tatgattaaa gacatttatt ggcgtaacaa catcaccgca cttgctcctt
     4381 ttttggaagg taaaatcaca attgaaaact cccagcaaaa agcacttatt tatggtgctt
     4441 attttcaaaa agccataaaa attaaagatg atgatgattt tatcacaggt ataaaaagtc
     4501 tttatcctta tttagcagtg caaggagaat gggcaaaaga tgatagcaat gaaatcatgc
     4561 taggcgaaga ctttgctaaa aacaataaac taaaattagg agatactatc aaactcatag
     4621 gagaaaacaa tcaaagcaaa gaagcaaaaa tcgtaggcat tttacttcat gccaatccta
     4681 aaatgtcaaa taaaatcatc gctcctttaa atttagctca agatttactc aacaaacaag
     4741 ggctttactc aagtacagaa gtaagagctt ttaccatacc tgaatcagcc ctttctgaaa
     4801 aagtacgtcg catgggcgaa gaaaaattag atcagttaga atatgacaaa tggtattgct
     4861 cagcttatgt aggctcaatc gctagtcaaa ttagcgatgg cttgccaggt gctgatgcaa
     4921 aagctctaaa tgctataagc gatgctcaaa gcttggtggt taaaaagatc caatccttaa
     4981 tgggcattac ttgcattatt tgtcttattg ttgcaagtat tgcgatttca agtctaatga
     5041 gttctgaaat tcatcgtaga aaaaaagaaa taggactttt aaaagtactt ggtgctaata
     5101 cttttcaaat ttatctcatc tttgctagtg aaaatttaat cgtagcttta tttgctgctt
     5161 tacttggatt tatttttggc acagcacttt ctcaaatcat cagtcttagt atttttggat
     5221 attttattga tatagccttt gtagctttac ctttaagctt tatttttgca ggacttattg
     5281 ccttacttgg ttgcttactt cctatcaaaa atatcacaca actttcagct gcaggagtgc
     5341 tttatggtag ataagttttt cctcaatgag ctttttaaaa gcattagctt ttcttatcaa
     5401 agacttttta ttatagtttt aagtgttttt ataggagcac ttacttgctc agctttttta
     5461 aatatttatt ttgatatcga catcaaactt tctaaagaat taaaagctta tggagcaaat
     5521 gtaatgataa gtcccaagca ggatgaaaat tttatctcca atactgagta tgaaaaaata
     5581 aaagaaaatt taaaggctag agctttaact ccttttttgt atgatttttt aaatttaggc
     5641 agtacaagcg gggtggtttt aggcactgat tttagggctt taaaaatcac taaacctttt
     5701 ttagaagtta aagaaggaag cttttctcta aatgattttg atgaaaattc agccttttta
     5761 ggagttaatt tagccaagca actaggccta aaagcaggca atgaacttca aatttataat
     5821 ccaaacaacg gaaaaagcat aaaacttacc ataaaaggca tactttcaag caatgatgaa
     5881 tttgatagca ttgttttagc ccctttaagc gtggtgcaaa atttaagcga tagagccggt
     5941 attaactatg ctaatgctgt agtttatgga aattttgatg aagttaaagc caaaacacaa
     6001 gcaatcagca atgaattcat cgatgcaaaa cctatatctt cagtatcctt aagtgaaggt
     6061 ttagtgcttg gaaaaatcaa agctttaatg tttttaatca tacttgtggt attgatcata
     6121 gttactacta gcgttaatac aactttaagt tctattatat tttctcgcaa aaaagaaatc
     6181 gcactgcgtt tagccttggg tgcgaaaaaa agtgaaattt ttaaactttt tgctagtgaa
     6241 tgctttatag taagtttttt tgctagttta atcggagctt tttgtgggat atttttagcc
     6301 aatgtctttg gttatttaat ttttaattct agtattgatt ttagatttat agctgttttt
     6361 atagccttaa tcatttcttt gatttttgcc tttttggctg cattttttcc tataaaaaga
     6421 gcattaaaaa tcaatgtgtg tgaaaatttg aaaggtgaat gatgaaaaaa gaacttatta
     6481 aaataaacaa tttaaataaa gaatttggca aagttaaagc cttaaacaat atcaacttaa
     6541 gcgtctatga aggagaatgg cttgccatca tgggtccatc aggaagtgga aaatcaacac
     6601 ttttaaacat actatcgctc atggatactc caagctctgg agagtatatc ttggataatg
     6661 aaaacctaga gcaaatggat gaagagcaaa aaatcacctt gcgtcgtgaa aaaatagggc
     6721 ttgtctttca acaatttcat cttatcccct atcttaacgc cttagaaaat gttatgctct
     6781 ctcagtatta tcactcaagt gtagatgaag aagatgccaa aatggttctt gaaaaagtag
     6841 gactttcgca tagactcact catttaccta gccaattaag tggcggagaa caacaaagag
     6901 tttgtatagc aagagcttta atcaacaacc cagagctttt actcgcagat gaacccacag
     6961 gaaatttaga tgaagccaat gaacaaatcg ttcttcaaac cttgcaaaaa ttaaaaaatg
     7021 aaggtaaaac catagtttta atcacacaca atcctgattt agccaaattc gcagatcgaa
     7081 cccttatctt acaacatggg gtgttaaaat gaaaaaaagc cttttaatct taagcatttt
     7141 gtttttactc aatgcttgtt cttttgaaaa ttcaaaagat actggaaaag ttggagaaaa
     7201 aagcgctgaa atttcagcta aagatacttt aggaaaagct gtaaaacttg ctgatgataa
     7261 tacaagttta aaagtcttag tcttttttca aaatggctgc ccttcttgct taaaagaact
     7321 cccttcttta gatgaattca tacaaaatca ccccaataaa atcagtgttt atgctataaa
     7381 ttccatcgat aatgccaatg tggttaaggt tttagccgaa caatttgact ttaaaaatgt
     7441 aaaagtttta aaagacgatc ttaaaatcac caatgatcgt tacgctgtgt ttgcaacccc
     7501 tactaccatc atcattaaag atgggatgat aaaagataga attttaggag aaaaaccatg
     7561 ggaatttttc gaatccaagc ttatttcttt gctttaatca tagctttatt ttttgtagct
     7621 tgtgatagtg gagaaaattt taaagcttta aatagcgata aaacctataa ttttgcctac
     7681 aatggttttg aaaaaagcct aaaactaaat gataaagcac aaaattttgc cttagtattt
     7741 ttcacaaaag attgcggagt ttgcaaagaa caaattccta ttttacagaa tttggctaaa
     7801 aattatgatt ttaatatctt tgtggtttta ggcgatgcaa acgatgcaaa cgatgcaaac
     7861 gatgcaaaag cttgggctga tgaaaaaggt ttatctaatt tagcaatgtt ttatgaaaaa
     7921 agagcagcta aatacctttc aagtgccatt ggggaaatat atggagtacc tgtgcttagt
     7981 tttttcaaag aaggaaaaat ggatgaaaaa ttcataggct taactcctta tagcatactt
     8041 gaaaaagaaa tcaaaaaagt aaaaagctaa aaatttactt taaagctttt tatcccctat
     8101 aaaatatcca taaagctcat agcttccatc ttttttcatc aaaattacag gatatttttc
     8161 actataacct tgttccattc ctggacttcc ttgcggcatg ccaggagctg aaattcctat
     8221 aacatcttta ggtttgtttt caagcaacca tgctatagca ctttcaggaa catgcccttc
     8281 aatagcatag ccttcaatca cacctgtatg gcaactttga tactcatctt ttatacccat
     8341 tttttctttg attttaagaa aatcattggt tttatgaaca ctaacctcat aacccttagc
     8401 tttcatataa tcagcccaaa gatcacaaca gccacaagta ggactttcat aaatttgtat
     8461 ttccttagcc tgcgtaagag tgagtaaaaa aagaatggtt aaaattgttt ttttcataat
     8521 tgctatccta agtaaaaaat atataataat acttttataa agttaatatc atcacatttt
     8581 taacactaaa aatgaattta caaaaattta atcaagaaaa gacttttaat gagtgttgat
     8641 tttgtctttg cagcaaagat ataaaagata aaacgattta aaaaactaga aatttttaac
     8701 ttaaaaagct taaaatttag atatatttta tacttactat gttttttcat agtatgttct
     8761 aatggtggat ttccgccaag agtgaaaact caaggcggat ttttatttgc aatatttact
     8821 taatagaata attatgatca gctgtgcctc cacataaata ccccttctta tcaaaacttg
     8881 caatttcgca agaaagagta tataatctag ctcttttacc atcactagtt aatataagaa
     8941 cttgtttata ataaacataa ttgcttttat ctgaatattc tttttgtatt atagcttgag
     9001 ttgaattata agttcttgga tcaacttttg caacaatatc tgcttcataa aaagttgcct
     9061 ttttaaaaag tggctcagtt aaagttgatt ttatactctc ttggaaatat ttgttttgca
     9121 tttcgcttgc tgaaactgga actaaatctt ttttattgat aactatcaaa tctgcaaatg
     9181 ctgacacatt taaagcaact aaaactgcta aaactaaacc taattttttc attttatctc
     9241 cttgaattga attttgtata tttgaattat ttttcaaatc ttttgcaaga taatttttaa
     9301 atttatctaa attaaatttg cattttatct aacaatcata agaaatttta aaatgaaata
     9361 aaaatttatg agaaatcaac tcttatttga aaatgataaa agtaagtggt gcggatgaaa
     9421 ggacttgaac cttcacgcat tgctgcacca gatcctaagt ctggcgtgtc tgccaatttc
     9481 accacatccg caaagtggta cgcccaagag gattcgaacc tctgacctac ggcttagaag
     9541 gccgttgctc tatccagctg agctatgaac gcatataaaa tcttggtggt gcgcccgata
     9601 ggaatcgaac ccataaccta cagatccgaa gtctgtcgct ctatccagtt gagctacgag
     9661 cgctagtggg gtgagtgatg ggaattgaac ccacgaccct caggaccaca atctgatgct
     9721 ctaaccgact gagctacact caccattttg tataaattta taaaaaatgg tcggggtgaa
     9781 aggattcgaa ccttcggccc cttggtccca aaccaagtgc gctaaccaga ctgcgctaca
     9841 ccccgaataa ataaaaggaa atattttatc acaaaataat tttaaagtca aggattttca
     9901 tctcttattc ttaaaaacac cggaaagcga ggtaaggaat ttttggtcaa tccattaaat
     9961 ttataagtca caatactacc aatttttgga ggattttttc tatcttcatc ttttaaacca
    10021 ctgcctattt taatgatttg tccattaggc attttacaaa gtaaggcacc tacttgattt
    10081 tcaaatttac ccttgccctt gcgaaatcct accaactcac attctgcatc atcatagggt
    10141 tttaatttcg tggcattttt acttctgcct ttttcataag gacttaaatt tttgcgtata
    10201 acaatacctt caccttgatt ttttataatg ctttcgtaaa attgatttaa attattttga
    10261 ttttcaactg gaatttgaga aataattttt atataggcac taggatattt ttgcaaatac
    10321 tcttctaaaa cagccaaacg atttttaaga gtgcaagtag aaatttgaaa ttcttcgcaa
    10381 gcatttggta catcaaaaat attataagtt acttccttcc ataaggtcaa attgctatcg
    10441 ccactacgaa ttaaagctga aatttcatca aatttatttc ttgctatcca aagctcacca
    10501 tcaatagcaa aaggagggaa attttttgta aaaaagtcag gagtttttat tttgtagttt
    10561 tggcgagttt ttagatattt cccatcccaa attccacgca ctccatcaag tttttcgctc
    10621 atcaaataag cattaaaatc tttagagtta aaatcttgct tatcgaattt gctaagaagt
    10681 aaaatttcat tagcaaaaac taaacaagca caacatatta aaaaaacaaa cctcatcaaa
    10741 gcagattaat catatatcca gttgcatctt tttgaatatt ataattataa gttccatcaa
    10801 gatatattac aagtcgataa tatcctttat gagatccaaa gtctatgcgt ttaaaaatag
    10861 aattgctaag gcgtatgttt tttgtagggc taatcatttt agatctaaaa tctataacga
    10921 ttttacttgg atttcctact gaaaaatctg taatcatttc atcactagtg ttaagtttta
    10981 ttttattttt ataaaccgca taagaaataa aatcataaat ctttgcaacc tgtaaaggta
    11041 tttcaacatt ggctgttgag tttgattctt gtttagagct atttttttca ggtatagtaa
    11101 ctgaaacatc aagtactttt gaaggatcag ggcttttaaa tcttgatata gtataagtat
    11161 cgtgccaatc aatactttta ttgacatcta aatcgatctt atcttcactt ccgtctaaat
    11221 tgatataatt aaaagtgatg ctttttaaaa ttcttgcact agaattaaat ttaacttcct
    11281 ctttttgaaa ttcaggtgga gcaaccaagg ttatattttg atctgtcttg aaaggatttt
    11341 catcagcata taaaagagag gtaaaaataa aaaatattgc caaaattcta gttttcattt
    11401 gggtataatc cttttaattc aaaataatct ttttgtgctt tagcattttg ttctttgagc
    11461 aaaataatct ttttattaag ctcttctttg gtattttcta agcttaataa agtatctaaa
    11521 gaatactgcc caaaaaacat attgccaaaa taaatcgctc caattacaac aagaaaagcc
    11581 caaaaaatca tttttataac atgggtataa aaactttttt ttcttgtgct ttcgtcgtat
    11641 tctttaagta aatcgctcag agcttttctc ctaaatattc atcgctttca aattcaattt
    11701 caagtaagcg attgtatttt gcggttcttt cgcctcttgc tagggctcct gttttaattt
    11761 gtcctgtatt taaagccaca gcaaaatccg ctataaaagc atcttcactt tcgccgcttc
    11821 tatgactcat cacacattta tagttatttc tttgcgctaa acgcacagtt ctcatagttt
    11881 gggtaatagt tccgatttga tttggtttga taagtacagc atttgccatt tttttgatga
    11941 taccttctct taaaatatct tcattggtca caaacaaatc atcgcctaca agctgaattt
    12001 tattgcctaa tttttcagtc agcttgatcc agccttcaaa gtcattttca gctaagccat
    12061 cttcgatact gcaaattgga tattttgcac aaagttctac atagcgttcg atcaaagcct
    12121 cgcttgaaaa agccttgcct tccatgtggt atttaccatc tttgaaaaat tctgtacttg
    12181 ccacatcaag agcaattttt acacgatttt cataacctgc ttttttgata caagtcatta
    12241 aaagatcgat aggttctgtg ttgttagcta aatttggagc aaaaccgcct tcatcaccta
    12301 aagccgtaga atgtccagaa tttgcgagtt ctttttttaa tatcgcataa atttcacaaa
    12361 ctgaacgcaa agcttcttta aagctagtaa aaccaaaagg catgatcata aattcttgaa
    12421 aatctacatt gttgtttgca tgagcaccgc catttatgat attacacatt ggcacgggta
    12481 aaatgctcgc atttgcacca cctaagtagc gatataaagg cattcccaaa gcagctgcag
    12541 ccgcacgagc tgttgccata gatacgccta aagtcgcatt tgcacctaaa tttgagtaat
    12601 tatttgttcc atcgagctca cgcaaagtat catcaagttg agtttgatta aaagcatcta
    12661 gtcctaaaat ttcatctgca atggtctcat tgacatttgc aacagctttt aaaacgcctt
    12721 ttccgccaaa tctttcatca ttatcacgca attctaaggc ttcttttgaa cctgtacttg
    12781 caccacttgg aactatggcc gcacctacac ttccatcgct tagcgtaact tcggctttta
    12841 cggttggatt tcctctacta tcaagaactt cataggctct aacatcttca attactaaca
    12901 ttattcttct ccttcgtcat cttcgctacc gctgatcata ccttctattc ccatagaatt
    12961 ttgaattgct tttgtgattt catctgcaat ttcagggttt tcttttaaga aagcttttga
    13021 attttctcta ccttgtccaa gttttttatc tttataagaa aaccacgcac cacttttatc
    13081 tacgatatca agttttacac cataatcgat caattcacct tcacggctta aaccctctcc
    13141 aaacatcaca tcaaattcag cttgtctgaa tggaggagca actttatttt taactacttt
    13201 tactttaacg cggtttccta taggttcttc gttttgtttt aaggttgcta cttttctaac
    13261 atctaaacgc acagaagcat aaaattttaa tgcatttcca cctgttgtgg tttcaggagt
    13321 accataaccc atagcaccga ttttcatacg aatttggttg ataaaaatta ctgtggtatt
    13381 cattttatga actatacctg taagttttct tagagcttga gacataagtc ttgcttgaag
    13441 tcctacatgt tgatcgccca tatcgccttc aatttctgct tttggagtaa gtgctgcaac
    13501 gctatctact acgataagat ctactgcgcc acttcttgct atagtttcta caatttctaa
    13561 ggcttgttct ccaaaatcag gctgagaaac atacaaatca tctgtattta cacccaaatt
    13621 tttagcatat tttacatcaa gcgcatgttc tgcatcgata aaagcacaaa ctccacctgc
    13681 tttttggcat tctgcgataa tatgtaaagt tagagtggtt ttacctgaac tttcaggtcc
    13741 ataaatttct ataattcttc cttttggaac accgcctata cctaaagcaa gatcaagccc
    13801 aactgaacct gtgcctatgc tatcgatttg ctcgacttct ttatccccta gtcttaaaat
    13861 agtgcctttt ccaaaggttt tatctaaact ttttagggca gcgtctagag attttctttt
    13921 attatcatcc ataactttcc ttaaaaattc taaattttta gttagaattc taacaaaata
    13981 aaattaaata atgatttatt ttgctagaat taaagcaaag atttaaagga agcatagatg
    14041 aaaaaaatta ctattgcaca ttctcctgat gctgatgata tttttatgta tatggcaatt
    14101 aaatttgggt ggatagggaa tgattttgct tatgaaaata cagctttaga tatacaaact
    14161 ttaaatgaat ttgccttgaa aaatgaattt gatgctacgg ctatttcttt tgggctttat
    14221 cctttaatcg cttctgagta tgcactttta cgcacagcag tgagttttgg tgaaggttat
    14281 gggccaaaac tcatcaagaa aaaagacacg catttaaaaa gaaattttaa agtcgctttg
    14341 agtggagcaa ataccaccaa tgctttgatt tttcgcatga aatatcctga agcaagaatt
    14401 atttataaga attttttaga cattgaaaat gcggttttaa gtggcgaagt agatgcgggg
    14461 gttttgatcc atgaaagcat tttaaatttt gatcaaagtc tttacgtgga agcagaactt
    14521 tgggatatat ggcttgaatt tgctaaagaa aatttgcctt tgcctttagg tggaatggct
    14581 ttgcgtcgtt ctttaccttt aagcgacgcg attaagatcg aaagagattt aaccaatgct
    14641 gtaaaaattg ccgatgcaaa tcgtaaaatt ttagccccta tgcttatgga aagaaaactt
    14701 atccgtgttg atgaagaaaa acttgatact tatcttaatt tatatgccaa taaaaactct
    14761 attagcatga atcaaactca acttttagct gtagatacgc tttttaaact aggatatgat
    14821 tataaatttt atgataaaat catacatgta aatgattttc ttatccctag cgaatacgaa
    14881 gaagctagaa attcttaaaa aggataaaaa tggatgaaag taccttagtt gctcttggag
    14941 tgcaaacctt taaaatcaca cttttacttt ccttgcctat gcttttagca ggacttattg
    15001 cagggcttgt gatcagtatt tttcaagcaa ctacacagat taacgaaatg acactttctt
    15061 ttgttcctaa aatcatcttg gttgtagtta ttttaatctt tttaatgcct tggatgacta
    15121 caactatgat tgattttact gagaatatac taaatcaaat tccaactttt atcaaatgat
    15181 cattgatttt aaaaaatact cttctgtgcg tataggaaat gaatttgaag ttttagtttt
    15241 ggatcaaatt tgtgattttg atggtttttt aataggtggt gcaaacaacc ttttagttag
    15301 tccaaaacct aaaaatatag gaattttagg agatggtttt aattttatac aaattttaga
    15361 tcggaataaa gattttatac atcttcgcat aggctgcaaa acaaaatcaa gtaaaatgta
    15421 tcgctttgcc aaagaaaaca atcttaaggg ttttgagtat ttaagcaaaa ttcctggtac
    15481 acttggcggg cttttgaaaa tgaatgcagg acttaaagga gagtgtatca gtcaaaattt
    15541 aatcaaaatt gctacttctc aaggcgaaat tctaagagca aatataaatt ttgattatcg
    15601 tttttgtcct ttaaatacgc attttttttg ggctgaattt aaactaaact ttggctttga
    15661 tacccttaaa gatgaagctt taaaaaatgc aagaagcaac caacctagtg gagcaagctt
    15721 tggctctatc tttaaaaatc cgaaaaacga ctttgcagga cgtttaatcg aagctgtagg
    15781 acttaaagga tttagcaagg gagatgctat gttaagcgat aaacacgcaa attttttaat
    15841 taataaaaaa aatgcaagtt ttgaagatgc gttttttctt atcgaattgg ctagaaaaaa
    15901 agtctttgaa gaatttggca caaacttaga aaatgaagtg attataatct aaacacacaa
    15961 aacaataaaa gtctaaaaaa tttactctta atctaacttt aaa
//
LOCUS       DAPIVO010000045        15893 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.045, whole genome shotgun sequence.
ACCESSION   DAPIVO010000045 DAPIVO010000000
VERSION     DAPIVO010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15893)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15893)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15893
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.045"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(15..1034)
                     /gene="flgS"
                     /locus_tag="RJ239_001267"
     CDS             complement(15..1034)
                     /gene="flgS"
                     /locus_tag="RJ239_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fla regulon two-component system sensor
                     histidine kinase FlgS"
                     /protein_id="HDV7331384.1"
                     /translation="MNESILKSLDSNEKETLQKGLESLIEQTYVIENEYKTLNENYNS
                     LRAMVDEIIEVLPSALWILDKEKNIILQNQEALKNPKLLSIISLDKIRDELEFEGRFY
                     AVKIIAHNEKTIVSATDISDEKRNERLASMGSVAAHLAHEIRNPIGSISLLASTLFAR
                     SELKNKHIVLEIQKAIARVERIVNSTLLFTKGVHINALNFNLLELKEECESAINSYNF
                     TSQIDFEISFLDKQICADKALLGLVLQNLIYNAIDAIEESECEKPMIKILASYDNEKI
                     CIRVYDNGCEIKDEKLVFEAFKTTKLKGNGLGLSLSKEIINAHKGELSFQSDPKNFYF
                     TLPLV"
     gene            complement(1038..1916)
                     /locus_tag="RJ239_001268"
     CDS             complement(1038..1916)
                     /locus_tag="RJ239_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7331385.1"
                     /translation="MLYKRKNIKFKNFVDLHKNLSLSKLFDFYSVFEGFEKLNILNFE
                     DDVFTNIERILLDDYLKIKSYFALDETSSYALTLLAKNNRKRFSINRKIQHFKALSTL
                     KYLLETGIIKLEYSKEAKKIKDKRQKIKKELRSYVVQDKIIFSNHFTRFFFYFLKPNE
                     KLILQNRYKEVLECIKEKFELYQSFCFEQLSRELLEKKFNINGVQSYWDKNLELDLYY
                     QDENLCFVGEVKFKNKKICKNILNLLKSKAKSLNLAPNYYIIISKNGFSKEIDKICEQ
                     NLLLLDLNDFKILLEE"
     gene            1952..3226
                     /locus_tag="RJ239_001269"
     CDS             1952..3226
                     /locus_tag="RJ239_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HDV7331386.1"
                     /translation="MYLQISDLKKELILKKGILHFDFTASALALKCVEKEILKILPTY
                     ANTHSDSSLNSFKTQQTYEQARKDIKKSLSLDENFALIACGTGSSSAIKKFQELIGIY
                     IPPLVKERYFTQIDKNTLPLVIVGPYEHHSNELSFREGLCECIRIPLDKNGEIDFDFL
                     EKTLQKNKKRKIIASFSLASNVTGILSDYKRISEMVRKFKGIVAFDASSFIPYKNISC
                     QYYDALFISSHKLIGGIGGSGLLAIKKDLCGNKPSFAAGGTVGYVSRTSQCYLCNEEA
                     LEEGGTPGILQLIRASLAFKIKDSIGVKNIEKKEEILKDYFFEKLKTIPNLILYAKNL
                     KTRLPIFAFNIKGISPFDIAYELSKKYHIETRAGCACAGPYGHDLLGLKDNQKLKTKP
                     GWLRISLHYTHEKEDIDYFFNALNKTIVKLSH"
     gene            complement(3223..4047)
                     /gene="purU"
                     /locus_tag="RJ239_001270"
     CDS             complement(3223..4047)
                     /gene="purU"
                     /locus_tag="RJ239_001270"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HDV7331387.1"
                     /translation="MISVLKICTKDQKGLIYRISDVIFKYHINIVKNDEFVGEGMFFF
                     RALLEGEFDKEAFIGTLEAMLGQEALIELCEKRKKDIVVFATKESHCLGDLLIKHYSN
                     ELEANIKAVISNHNSLKDLVEKFEIPYHFISAENLDRKEQENQILKCLEQYKFDYLVL
                     AKYMRILSPDFVRHFEGKIINIHHSFLPAFIGANPYKQAFERGVKIIGATAHFVNNNL
                     DEGPIITQAVSPVNHEFTWQDMQQAGRNIEKDVLSKALDLAFEDRIFIHNNKTIIF"
     gene            complement(4044..5162)
                     /locus_tag="RJ239_001271"
     CDS             complement(4044..5162)
                     /locus_tag="RJ239_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HDV7331388.1"
                     /translation="MQISKISLKNNPDLQFIAEFLKPYTKRAYLVGGSVRDLFLGLKI
                     CDYDIELYDIKPKDFEKIMQKLGAQGFGKSFFVYKFKNYDLALARTENKISYGHKGFE
                     VQICNDEKLGAKRRDFTINSMMINLFNDEFLDFYGGLKDLGVGFLRHIDKQSFQEDSL
                     RVLRAVVFASRFNFKITSESLKLMQSMDITDLSKDRINAELCKFFKSPRLDVGYRYLQ
                     ELGLEKQVFGFESVFKSSEFQNLLRQSREFVKSDALFLYLYLNFFNLEKDIFFKRTKL
                     KKEYLKYANQAFYLDDISDFELAKIAFEMPLKEWLGLWSKKRIEQAKRLGLYENKFES
                     KILAKDFINAGFCGKILGLKLQEARENELKEYIKGLAK"
     gene            complement(5131..5622)
                     /locus_tag="RJ239_001272"
     CDS             complement(5131..5622)
                     /locus_tag="RJ239_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate:acceptor oxidoreductase"
                     /protein_id="HDV7331389.1"
                     /translation="MNLEDLAKKTISEVSSIMEEQRRQNEILKEQELNRKTEIKDELP
                     PMEFVCEELDTPQDLEDKISMAKFEEEQKIQNNIEISTQENKEFKKEEPFLQNEILNP
                     SVMTEVQTLNEDIFLKHLRERILVLFEGLNSIKKDDLENRLNLTINFLEFLLANIEDK
                     LKK"
     gene            complement(5619..5867)
                     /locus_tag="RJ239_001273"
     CDS             complement(5619..5867)
                     /locus_tag="RJ239_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDV7331390.1"
                     /translation="MMKNTVTEASIYEAQGLKDEALEIYKNILKEDPNNQNAIDAVRR
                     LSGFRSKHKDLNTQMLDFFINMKSDEEINEFKRWLIKI"
     gene            complement(5946..6119)
                     /gene="tatA2"
                     /locus_tag="RJ239_001274"
     CDS             complement(5946..6119)
                     /gene="tatA2"
                     /locus_tag="RJ239_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA2"
                     /protein_id="HDV7331391.1"
                     /translation="MVFLIPLLIIIGVIFGIDYVYFKNQDLKVQVKKEQKELNSSLEK
                     EKKEYIEKLFKTK"
     gene            complement(6132..6470)
                     /locus_tag="RJ239_001275"
     CDS             complement(6132..6470)
                     /locus_tag="RJ239_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HDV7331392.1"
                     /translation="MNNLSSVLILAKEEYINDLKKAISEIPFCSVELCENEKIIVVIE
                     SENLEDELNSYKMLEKLPNIISINMVFSYQDLNDDIQKAINSGAIETIEKNENAENVR
                     YYGSVFNQFS"
     gene            complement(6463..7377)
                     /locus_tag="RJ239_001276"
     CDS             complement(6463..7377)
                     /locus_tag="RJ239_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HDV7331393.1"
                     /translation="MKKFLFILSLFCVLSYAYELKLNANITALKLDKQNLYIGTDKGE
                     ILQYNIKDKSLKELLSLPKIKNYYGDDFAKIYNIDIFKHTLLILSEGDFGAKNLSFYK
                     ENLQIKKLEENSIIKAFFINENTYLLISIGSEIELIDKSLKNIKKFNFSHSSLNDAVL
                     NEDKSRLIAGFESGEVELFDLKNWKMLKNYDKMHKDNIYQVDFKNNVILSCGTDRRIG
                     VVKNEEQNFLQKDFLIYTCALSPSGEFAVYSDNEAGVSEVFSTSDFKPVKTFNNENLM
                     SEFIIFLNNKDFIVSGFGDSIMFRSIDE"
     gene            complement(7382..7906)
                     /locus_tag="RJ239_001277"
     CDS             complement(7382..7906)
                     /locus_tag="RJ239_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HDV7331394.1"
                     /translation="MMKKKLVLLGSAAVVFFAACAMNSGVSSEQIGLRKASLENENKV
                     NLVEANFTTLQPGESTRFERSYENAPPLIPHAIEDLLPITKDNNMCLSCHDKAIAADA
                     GATPLPASHYYDFRHNKTTGDMISDSRFNCTQCHVPQSDAKPLVGNSFKPEFKNEQLK
                     SRSNLIDVINEGVK"
     gene            complement(7903..8685)
                     /gene="napH"
                     /locus_tag="RJ239_001278"
     CDS             complement(7903..8685)
                     /gene="napH"
                     /locus_tag="RJ239_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HDV7331395.1"
                     /translation="MMKYLIARRIVQLGILALFSFKATDFILQGNLSSSRLFNTIPLS
                     DPFAVLQIILASWSIDLMALIGALIIFFIYGLLLGRVFCSWVCPVNLITDFAAFVRNK
                     LTLNNKFLILPKNLRYFVLVLVLVLSFVFSLPVFESFSYIGMIHRGIIFATSSWIFVA
                     FILFCIDTFLSPRAICSHFCPLGAFYAFISRFALLKIKHDSDKCTKCYECIRICPEKQ
                     VLWMVGKESTSVKSGECIRCARCIEVCNDDALNFNIFDLRNK"
     gene            complement(8682..9422)
                     /gene="napG"
                     /locus_tag="RJ239_001279"
     CDS             complement(8682..9422)
                     /gene="napG"
                     /locus_tag="RJ239_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HDV7331396.1"
                     /translation="MKGRREFFVSAFKAACLCTGGGFLANLALKADDNYALRPPGAEN
                     EARFLSKCIRCGLCVKACPYDTLKLASLLDSPKNGTPFFKAREIPCYLCKDIPCIREC
                     PTDALDKKHLEQGIESLKMGIAIVDSASCVAHWGIQCDACYRACPLIDRALKLELKRN
                     ERTAKHAFLLPSVDHEVCVGCGLCELACITEKPAIRVLPREYVLGKAGSHYVKGWDEK
                     DEGRIKNADTSKHFNVKKATNYLNDGEL"
     gene            complement(9440..12214)
                     /gene="napA"
                     /locus_tag="RJ239_001280"
     CDS             complement(9440..12214)
                     /gene="napA"
                     /locus_tag="RJ239_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic nitrate reductase subunit alpha"
                     /protein_id="HDV7331397.1"
                     /translation="MNRRDFIKNTAIASAASVAGLSVPSSMLGAQEEDWKWDKAVCRF
                     CGTGCGIMIARKDGKIVATKGDPAAPVNRGLNCIKGYFNAKIMYGEDRLVMPLLRMNE
                     KGEFDKKGKFQQVSWQRAFDEMEKQFKKAYNELGVTGIGIFGSGQYTIQEGYAALKLA
                     KAGFRTNNIDPNARHCMASAVVGFMQTFGVDEPSGCYDDIELTDTIITWGANMAEMHP
                     ILWSRVSDRKLSNLDKVKVVNLSTFSNRTSNIADIEIIFKPNTDLAIWNYIAREIVYN
                     HPEAMDMKFIKDHCVFATGYADIGYGMRNNPNHPKFKESEKDTVEKENVITLDDEEAT
                     SLSYLGVKAGDKFEMKHQGVADKNWEISFDEFKKGLAPYTLEYTARVAKGDDNESLED
                     FKKKLQELANLYIEKNRKVVSFWTMGFNQHTRGSWVNEQAYMVHFLLGKQAKPGSGAF
                     SLTGQPSACGTAREVGTFSHRLPADMVVANPKHREISEKIWKVPAKTINPKPGSPYLN
                     IMRDLEDGKIKFAWVQVNNPWQNTANANHWIAAAREMDNFIVVSDCYPGISAKVADLI
                     LPSAMIYEKWGAYGNAERRTQHWKQQVLPVGAAMSDTWQILEFAKRFKLKEVWKEQKV
                     DNKLTLPSVLEEAKAMGYSEDDTLFDVLFANKEAKSFNPNDAIAKGFDNTDVKGDERK
                     IQGSDGKEFTGYGFFVQKYLWEEYRKFGLGHGHDLADFDTYHKVRGLRWPVVNGKETQ
                     WRFNTKFDYYAKKAAPNSDFAFYGDFNKMLTNGDLIAPKDEKEHSIKNKAKIFFRPFM
                     KAPERPSKEYPFWLATGRVLEHWHSGTMTMRVPELYRAVPEALCYMSEKDGEKLGLNQ
                     GDLVWVESRRGKVKARVDMRGRNKPPVGLVYVPWFDENVYINKVTLDATCPLSKQTDF
                     KKCAVKIYKA"
     gene            complement(12461..12988)
                     /gene="tpx"
                     /locus_tag="RJ239_001281"
     CDS             complement(12461..12988)
                     /gene="tpx"
                     /locus_tag="RJ239_001281"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HDV7331398.1"
                     /translation="MSIVNFKGNPVKLKGNSVEVGADAPKVNLKAKDLSVIEIGAAGK
                     TQIILSVPSLDTPVCATEAREFNKKVASYNGAEVIVVSMDLPFAMGRFCSTEGIENLS
                     VASDFVAKEFGEKYGVLINEGALEGLLARAVFVIKEGKVAYKELVNEITEMPDIAKLD
                     AFFGGSSCCGGCGCH"
     gene            complement(13087..13824)
                     /gene="peb2"
                     /locus_tag="RJ239_001282"
     CDS             complement(13087..13824)
                     /gene="peb2"
                     /locus_tag="RJ239_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AcfC family adhesin PEB2"
                     /protein_id="HDV7331399.1"
                     /translation="MKKILILSLAASFLNAEILVYGPGGPAPVLKELALKFEEKTKEK
                     VIVTAGPTPAWVDKAKENADLIFSGNTSMMDDFAKKIPSLSLENLSVLNVRPSGIIVR
                     PNNPKNIKNFEDILKDGINVMVVDGAGQVGLYEDMALKSAKRENLVKLRKNIKIYAKN
                     SKAAVDEWNNNPNIDALIIWSHWAKALGDDKALFIKDKNAVIYRAAEIAPTKKGLENK
                     KALEFVDFIKSQEAQKVWKKYTWKEVK"
     gene            complement(13863..15893)
                     /locus_tag="RJ239_001283"
     CDS             complement(13863..15893)
                     /locus_tag="RJ239_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HDV7331400.1"
                     /translation="MPLSKLNNEQYLAATADFGHNLVIASAGTGKTSTIVARISYLLS
                     KGVAPQKIMLLTFTNKASKEMIGRLGKFFDKNITSKILAGTFHSTAYTLLRNADKNIA
                     LKQASELKTLLKSVYEKRTFRHLSDIKPYQSSYLYDLYSLFQNKAHNQDFYTWFCQNY
                     EDQSIYAEIYEDILKEYDNEKKRFNYVDFNDLLINLKDLLKEEKYEFDEILVDEYQDT
                     NTLQSSLIEAFHSKSLFCVGDYDQSIYAFNGADINIIGGFKDRFKDAKIFSLNKNYRS
                     SRSILALANKVILNNERLYPKELIVTRNDEFKAPSLLTFEELFDQYQNIAKMILTSGV
                     SLEEIAVIFRNNSSADGVEVALREQGIASVRKGSGSFFESLEVKAFSSMLALVVNPKD
                     IMAFIHLVQYTKGVGGVLAKEIFDALLKLGHGNLIKGFLDPDKNVNLQNHQKRNYQLG
                     LFADLEELASETRFKFESEFDAHPILRLSKINDLCARNLEKIYLFLKKAMEIKHSLTL
                     VNLICENSFYREICEELATKRATNKAGQVDLLRKSENLEKIETKFNVLKELTKNYSDI
                     YKYYNFLTLGASEMSSGKGVNLLSVHASKGLEFDLVFVIDLAQGRFPNQKLMGMGGSL
                     EEERRLFYVAVTRAKNILYLSYAKYDKNKKTSFAPSRFLIEAGLCKGELTID"
BASE COUNT         5346 a         2968 c         1896 g         5683 t
ORIGIN      
        1 aaagaaaata tttatcacac caaaggtaag gtaaaataaa aattcttagg atcactttga
       61 aaacttaact ctcccttatg agcgtttatg atttctttag aaagagacaa gccaagtcca
      121 ttgcctttaa gttttgttgt tttaaaagct tcaaaaacca atttctcatc ttttatttca
      181 caaccattat catacactct gatgcatatt ttttcattat cataacttgc taaaatttta
      241 atcataggct tttcacattc gctttcttct atcgcatcaa tagcattata aatcaaattt
      301 tgcaaaacca aaccaagaag agctttatca gcacaaatct gcttatccaa aaaagatatt
      361 tcaaagtcta tttgagaagt gaaattataa gagttaatgg cactttcaca ctcttctttt
      421 aactctaaaa gattaaaatt taaagcattg atgtgtacac ccttagtaaa aagtagagtt
      481 gaatttacga tacgctccac tctagcaata gccttttgga tttcaagaac tatatgctta
      541 tttttaagct cactacgagc aaaaagggtt gaagcaagta aagatataga tccaatagga
      601 tttcttatct catgtgccaa atgagccgct acactaccca tgcttgcaag cctttcattg
      661 cgtttttcat cgctaatatc tgtagctgaa actatagttt tttcattatg cgctatgatt
      721 tttaccgcat aaaacctacc ttcaaattca agctcatcac gaattttatc aagactaatg
      781 atactaagta attttggatt tttcaaggct tcttgatttt gtaaaataat atttttttct
      841 ttatctaaaa tccaaagcgc actaggcaac acctctataa tctcatcaac cattgcgcgt
      901 aaggagttat agttttcatt taaagttttg tattcatttt ctattacata agtttgttct
      961 ataagacttt ctaagccttt ttgtagggtt tctttttcat ttgagtctaa actttttaaa
     1021 atactttcat tcatttatca ttcctctaat aaaatcttaa aatcattcaa atcaagtaaa
     1081 agcaaattct gttcacatat tttatcaatt tccttgctaa aaccattttt tgagattata
     1141 atgtaataat ttggagccaa atttaaagac tttgcttttg attttaaaag atttaaaata
     1201 tttttacaaa tttttttatt tttaaattta acttctccga caaaacacaa attttcatct
     1261 tgataataaa gatcaagttc taaattctta tcccagtaac tttgcactcc attgatattg
     1321 aattttttct caagtaattc tctagaaagc tgttcaaaac aaaaactttg ataaagttca
     1381 aatttttcct taatacattc taaaacttct ttataacgat tttgcaaaat aagcttttca
     1441 ttgggcttta aaaaataaaa aaagaaacga gtaaaatggt tgctaaatat aatcttatct
     1501 tggacaacat aagatcttag ttcttttttg attttttgtc ttttatcttt tattttttta
     1561 gcttccttac tatactcaag ttttattata cctgtttcta aaagatattt aagtgtagat
     1621 aaagctttaa aatgctgaat ttttctattg atagaaaaac gcttgcgatt gtttttagct
     1681 agtaaagtaa gagcgtaaga acttgtttca tccaaggcga aataactttt aatttttaga
     1741 taatcatcaa gcaaaattcg ctctatattt gtaaatacat cgtcttcaaa atttaaaatg
     1801 tttaattttt caaaaccttc aaacacacta taaaaatcaa aaagcttact taaagacaaa
     1861 ttcttatgca aatctacaaa gttcttaaat tttatatttt tccttttata aagcattttt
     1921 atagtataat tttagcaaat ttttataagg attgtatttg caaatttcag atttaaaaaa
     1981 agaattgatc ttaaaaaaag gtattttgca ttttgacttc acagcaagtg ctttagctct
     2041 aaaatgtgta gaaaaagaaa ttttaaaaat tctcccaacc tatgcaaaca cacattctga
     2101 tagctctttg aattctttta aaactcaaca aacttacgaa caagcaagaa aagatataaa
     2161 aaaaagttta tcattagatg aaaattttgc ccttatagct tgcggaacag gatcaagcag
     2221 tgctattaaa aaatttcaag aattgatcgg catttacatt ccccctcttg taaaagaaag
     2281 atattttacg caaattgata aaaatacctt acctttagtt atcgtagggc cttatgagca
     2341 tcattctaat gaactttcat ttcgagaagg cttgtgcgaa tgtattagaa ttcccttgga
     2401 taaaaatgga gaaattgatt ttgattttct agaaaaaact ttacaaaaaa acaaaaaaag
     2461 aaaaataatc gctagctttt ctttagcttc aaatgttact gggatattaa gtgattacaa
     2521 acgcatttct gaaatggttc gtaaatttaa agggatagtt gcttttgatg catctagttt
     2581 cattccctat aaaaacatat cttgtcaata ctatgatgcg ttgtttataa gttctcataa
     2641 attaatcggt ggtattggcg gttctggact tttagccatc aaaaaagatc tttgtggaaa
     2701 caaacctagc tttgccgcag gtggaactgt gggctatgtt tctcgcactt cacaatgcta
     2761 cctttgcaat gaagaagctt tagaagaagg aggaacacct ggaattttac aactcattcg
     2821 cgctagctta gcttttaaaa tcaaagattc tataggggtt aaaaatatag aaaaaaaaga
     2881 agaaatttta aaagattatt tttttgaaaa actaaaaact atacctaatt taattttata
     2941 cgcaaagaat ttaaaaaccc gattgcctat ttttgctttc aatatcaaag gaatttctcc
     3001 ttttgatatc gcttacgaac ttagtaaaaa ataccacata gaaacacgcg ctggatgtgc
     3061 ttgtgctggg ccttatggtc atgatttgct aggcttaaaa gataatcaaa aacttaaaac
     3121 aaaaccaggt tggttaagaa taagcttgca ttatacgcat gaaaaagagg atattgatta
     3181 tttttttaat gctttaaata aaactatagt aaaattatcg cattaaaata ttatagtttt
     3241 attattatgt ataaaaattc tatcttcaaa agccaaatca agtgcttttg aaagaacatc
     3301 tttttctata tttctacctg cttgttgcat atcttgccaa gtaaattcat ggtttacagg
     3361 cgaaacagct tgagtgataa taggaccttc atcaagatta ttatttacaa aatgtgccgt
     3421 agctccaatt attttaaccc ctctttcaaa ggcttgttta taaggatttg ctcctataaa
     3481 tgcaggtaag aaagaatggt gaatatttat aatcttgcct tcaaaatgcc taacaaaatc
     3541 aggagataaa attctcatat attttgccaa aaccaaataa tcaaatttat attgttcaag
     3601 acattttaaa atctgatttt cttgctcttt acgatctaaa ttttcagcgc tgataaaatg
     3661 ataaggaatt tcaaatttct caactaaatc ctttaaagag ttgtgatttg aaatcacagc
     3721 tttgatattt gcttcaagtt cgttactata atgctttatt agcaaatctc ccaaacaatg
     3781 actttcttta gtagcaaaaa caacaatatc tttttttctc ttctcgcaaa gctctatcaa
     3841 ggcttcttgt ccaagcatag cctcaagcgt tcctataaaa gcttctttat caaactcacc
     3901 ttctaaaaga gcacgaaaaa aaaacattcc ttcacctaca aattcatcgt tttttactat
     3961 attgatatga tatttaaaaa taacatcaga aattctataa attaaacctt tttgatcttt
     4021 ggtgcaaatt tttaatacag aaatcattta gctaaacctt ttatatattc ttttaattca
     4081 ttctctcttg cttcttgaag ctttaaacca agaattttac cacaaaatcc agcatttatg
     4141 aaatcttttg ctaaaatttt actttcaaac ttattctcat aaagccctaa tcttttagct
     4201 tgctcaatac gctttttact ccaaagtcca agccattcct tcaaaggcat ttcaaaagca
     4261 atttttgcta gttcaaaatc acttatatca tcaagataaa aagcttgatt tgcgtatttt
     4321 aggtattctt ttttaagttt agttctttta aaaaatatat ctttttctaa attaaaaaaa
     4381 ttcaaataca aatacaagaa taaagcatcg ctttttacaa attctctact ttgtctgagt
     4441 aaattttgaa attccgaact cttaaaaaca ctctcaaagc cgaaaacctg tttctctaag
     4501 ccaagttctt gtaaatatct atagccaaca tcaagtctag gacttttaaa gaatttacaa
     4561 agctccgcat tgatcctatc tttgctaaga tcagttatat ccatactttg catcaatttc
     4621 aagctttcac tagttatctt aaagttaaac cttgaggcaa atactactgc tcttaatacc
     4681 cttaaactat cctcttgaaa gctttgttta tcaatatgcc ttaaaaagcc tactcctaga
     4741 tcttttaatc ctccataaaa atctaaaaac tcatcgttaa aaagattaat catcatagaa
     4801 tttatggtaa aatcgcgtct tttggcgcca agtttttcat cattgcaaat ttgaacttca
     4861 aaacctttat gtccatagct tattttattt tcggttctag caagagctaa atcataattt
     4921 ttaaacttat atacaaaaaa actttttcca aagccttgtg cgcccaattt ttgcataatc
     4981 ttttcaaaat ctttaggttt tatatcataa agctctatat catagtcgca aatttttaaa
     5041 cctaaaaaca aatccctaac gctacctcca accaaatacg ctcgtttggt ataaggcttt
     5101 aaaaactcag cgataaactg taaatcggga ttatttttta agcttatctt cgatatttgc
     5161 aagcaaaaac tctaaaaaat ttatggtcaa gtttaaccta ttttcaagat catctttttt
     5221 tatgctattt aaaccttcaa aaagaactaa aattctctct ctaagatgtt ttaaaaaaat
     5281 atcctcatta agcgtttgaa cctctgtcat aacactagga tttaaaattt cattttgtaa
     5341 aaaaggctct tcttttttaa actctttatt ttcctgagta gaaatttcaa tattattttg
     5401 tattttttgc tcttcttcaa attttgccat agaaatttta tcttctaagt cttgcggagt
     5461 atcaagctct tcgcatacaa actccatagg tggtaattca tcttttattt cagtttttct
     5521 atttaattct tgttctttta aaatttcatt ttgtcttctt tgctcttcca tgatagagct
     5581 aacttcgcta atggtttttt tagctaaatc ttccaaattc atatttttat caaccacctt
     5641 ttaaattcat taatttcttc atcgcttttc atattaataa aaaaatccaa catttgagtg
     5701 tttaagtctt tatgcttgga tctaaaacca ctaagacgac gaaccgcatc gatagcgttt
     5761 tggttattcg gatcttcttt taagatattt ttataaattt ctaaagcttc gtcttttaac
     5821 ccttgagcct catagataga agcttcagtg actgtatttt tcatcactgt ttcctaaaat
     5881 ttttctttaa ttctagcaaa aagcttttta atttatcttt aagaaaataa tatgattttt
     5941 aatgcctatt ttgttttaaa caatttttct atatattctt ttttttcttt ctctaagcta
     6001 gaatttaatt ctttttgttc ttttttaact tgcactttta aatcttgatt tttaaaatac
     6061 acataatcaa ttccaaaaat aacaccaatt ataataagca atgggattaa aaataccata
     6121 tactttacac tttaagaaaa ttgattaaac acactaccat agtagcgaac attctcagca
     6181 ttttcatttt tttctatcgt ttctattgcg ccactattga ttgctttttg gatatcatca
     6241 tttaaatctt gataagaaaa aaccatatta atactgataa tatttggcaa tttctcaagc
     6301 attttataag agtttaactc atcttctaaa ttttcacttt caatcacaac tataatcttt
     6361 tcattttcac aaagttctac agaacaaaaa ggaatttcag atatagcctt ttttaaatca
     6421 tttatatatt cttcttttgc taaaatcaaa acactagaaa gattattcat caatactcct
     6481 aaacattata ctatcaccaa agcctgaaac gataaaatct ttattgttta aaaaaataat
     6541 aaactcactc atcaaatttt cattattaaa agttttaaca ggcttaaaat cacttgtgct
     6601 aaaaacttca ctaactccag cttcattatc gctataaaca gcgaattctc cactaggact
     6661 taaagcacaa gtatatatca aaaaatcttt ttgtaaaaaa ttttgttctt cattttttac
     6721 aactcctata cgcctatccg ttccacaact taaaataaca ttatttttaa aatctacttg
     6781 atagatatta tctttatgca ttttatcata gtttttcaac atcttccaat ttttcaaatc
     6841 aaaaagttct acttcgccac tctcaaaacc tgcaattagt ctactcttat cttcatttaa
     6901 aactgcatca ttaagactag aatgggaaaa attaaatttt tttatatttt ttaaactttt
     6961 atcaatcaat tctatttcag aaccaataga aatcaaaaga taagtatttt cattgataaa
     7021 aaatgctttt attatgctat tttcttcgag ctttttgatt tgtaaatttt ccttataaaa
     7081 acttaaattt ttagcaccaa aatcaccctc gctaagtatt aaaagtgtat gtttaaaaat
     7141 atcaatgttg taaattttag caaaatcatc accataataa tttttaatct ttggcaaaga
     7201 taaaagttct tttaaacttt tatctttaat gttatattgc aaaatttcac ctttatcagt
     7261 gcctatatat aagttttgct tatcaagctt taaagctgtt atattggcat ttaatttcag
     7321 ctcataagca taagacaaaa cacaaaaaag actcaaaata aaaagaaatt ttttcattta
     7381 tttactttac accctcatta atcacatcaa ttaaatttga acgacttttt aattgttcat
     7441 ttttaaattc aggtttaaag ctatttccca ctaaaggttt tgcatcactt tgtggaacat
     7501 gacactgagt gcaattaaaa cgactatcgc taatcatatc tcctgtggtt ttattgtgtc
     7561 taaaatcata ataatgacta gcaggaagtg gagttgcacc agcatctgct gctatagcct
     7621 tatcatggca gcttaagcac atattgttat ctttagttat aggtaacaaa tcttcaatag
     7681 catgcggaat taatggtggt gcattttcat aagaacgctc aaaacgagta gattccccag
     7741 gctgtaaagt tgtgaaattt gcctccacta aatttacttt attttcattt tctaaacttg
     7801 cttttctaag tccaatttgt tctgaactta ccccactatt cattgcacaa gcggcaaaaa
     7861 ataccactgc agcacttcct aataaaacca atttcttctt catcatttat tccttaaatc
     7921 aaaaatatta aaattcaaag catcatcatt acaaacttct atacatcttg cacaccttat
     7981 acactctcct gatttcacgc tagtactttc ttttccaacc atccacaaaa cctgtttttc
     8041 aggacaaata cggatacatt cataacattt agtgcattta tcactatcat gctttatttt
     8101 aagcaaagca aaacgagaaa taaaagcata aaaagctcct agtggacaaa aatgtgaaca
     8161 aattgcccta ggacttaaaa aagtatcgat acaaaaaagt ataaaggcta caaaaatcca
     8221 agaacttgta gcaaaaataa tccctctatg tatcattcct atataagaaa aactttcaaa
     8281 cacaggcaat gaaaatacaa aagaaaggac taaaaccaag accaatacaa aatagcgtaa
     8341 atttttaggc aaaattaaaa atttattatt aagggttaat ttatttcgca caaaagcagc
     8401 aaaatctgtg attaaattaa caggacaaac ccaagagcaa aaaacccttc ctaaaagcaa
     8461 accatagata aaaaatataa tcaaagctcc tattaaagcc attaaatcta tactccagct
     8521 tgctagaatg atttgcaaaa ctgcaaaagg atcacttaaa ggtatggtat taaaaagtct
     8581 agaagaactt aaatttccct gcaagataaa atctgtagct ttaaaactaa aaagcgctaa
     8641 aattccaagc tgaacgatgc gtctagcaat taaatacttc atcacagttc tccatcattt
     8701 aaataattgg ttgctttttt aacattaaaa tgttttgaag tatctgcatt ttttatacga
     8761 ccttcatctt tttcatccca gccttttaca taatgagatc ctgcttttcc caatacatac
     8821 tcccttggca aaacacgaat ggccggtttt tcagtaatac aagccagttc acaaagccca
     8881 caacctacac acacttcatg atccacacta ggtagtaaaa aagcatgttt ggcggtgcgt
     8941 tcattgcgtt taagctcaag ttttaaagcc ctatctatca aaggacaagc tctataacaa
     9001 gcatcacatt gaattcccca gtgtgccaca caagaagcac tatcaacaat agcaataccc
     9061 attttcaaag attctatacc ctgctctaaa tgctttttat ctaaagcatc agttggacat
     9121 tctctaatgc aaggaatatc cttgcaaaga taacaaggaa tttctcttgc cttaaaaaaa
     9181 ggcgtaccat tttttggact atctaacaag ctagcaagct ttaaagtatc ataaggacag
     9241 gcttttacac aaagcccaca acgaatacat ttacttaaaa atctagcttc attttcagcc
     9301 ccaggaggac gcaaggcata attatcatca gcttttaaag ccaaattagc caaaaatcca
     9361 cctcctgtac ataaacatgc agccttaaag gcactaacga aaaattctct tctacctttc
     9421 atttaatcaa aaccctaaat taagctttat aaatttttac agcacatttt ttaaagtcag
     9481 tttgttttga aagcggacaa gtcgcatcca aagtaacttt attgatatat acattctcat
     9541 caaaccacgg cacatacaca agtcctacag gcggtttgtt tcttccacgc atatctactc
     9601 ttgcttttac tttaccacga cgagattcca cccaaaccaa atcaccttga tttaagccta
     9661 atttctctcc atctttctca ctcatatagc aaagtgcttc aggcacagca cggtaaagct
     9721 caggcacacg catagtcata gttccactat gccaatgctc taaaaccctt cctgttgcaa
     9781 gccagaacgg atactcttta cttggtcttt caggtgcttt cataaatggc ctaaagaaaa
     9841 ttttagcctt atttttaata ctgtgctctt tttcatcttt aggagctatt aaatccccat
     9901 ttgtaagcat tttgttaaaa tcaccataaa aagcaaaatc tgaatttgga gccgcttttt
     9961 tagcataata atcaaattta gtattaaatc tccactgtgt ttccttgcca ttaaccacag
    10021 gccatcttaa accccttact ttatgatagg tatcaaaatc cgctaaatca tgtccgtgtc
    10081 ctaagccaaa tttacgatat tcttcccaaa ggtatttttg aacgaaaaag ccatagcctg
    10141 taaattcttt tccatcactg ccttgaattt ttctctcatc acctttaaca tcggtattat
    10201 caaagccttt tgcgatggca tcgtttggat taaagctttt tgcttcttta ttggcaaata
    10261 gcacatcaaa aagtgtatca tcttcgctat aacccatagc ttttgcctct tctaaaacgc
    10321 ttggcaaggt aagcttatta tccacttttt gctctttcca aacttcttta agcttaaagc
    10381 gttttgcaaa ttctaaaatt tgccaagtat cactcatggc agcacctaca ggtaagactt
    10441 gttgtttcca atgttgagtt cttctttcag cattaccata agcaccccat ttttcataaa
    10501 tcatagcgct tggtaaaata agatcagcta cttttgctga aattccagga taacaatcac
    10561 ttacaacaat aaaattatcc atttctcttg ctgctgcaat ccagtgattt gcatttgcag
    10621 tgttttgcca tggattattc acttgcaccc atgcaaattt aatttttcca tcttctaaat
    10681 ctctcatgat attaagataa ggagaacctg gttttgggtt gatagtcttt gcaggaactt
    10741 tccaaatttt ttcagaaatt tctctgtgtt ttggattggc tacaaccata tctgcaggca
    10801 aacgatgtga gaaagttcct acttccctag ctgttccaca ggcacttggc tgtcctgtta
    10861 aagaaaaggc tccactacct ggtttagctt gctttcctag caaaaaatgt accatataag
    10921 cttgttcatt tacccaagaa cctcttgtgt gttgattaaa gcccatagtc caaaaactta
    10981 cgactttgcg atttttctct atgtaaagat tagctaattc ttgaagtttt ttcttaaaat
    11041 cttccaaaga ctcattatca tcacctttgg ctactcttgc agtgtattct aaagtataag
    11101 gggctaaacc ttttttaaat tcgtcaaaag aaatttccca gtttttatca gccacacctt
    11161 gatgtttcat ttcaaattta tcacccgctt taacgccaag ataagataaa gaagtagcct
    11221 cttcatcatc taaagtgatt acattttctt tttcaaccgt atctttttca ctttccttaa
    11281 attttggatg atttggatta tttctcatac cataaccaat atcagcataa ccagttgcaa
    11341 atacgcagtg atctttgata aatttcatat ccatagcctc tggatgatta taaacaatct
    11401 ctcttgctat gtagttccaa atagccaaat ctgtatttgg tttaaaaata atttcaatat
    11461 cagcaatatt tgaagtacgg ttagaaaaag tgcttagatt aacaacttta accttatcaa
    11521 gattgcttag ttttctatca cttactcttg accaaaggat tgggtgcatt tcagccatat
    11581 tagctcccca agtgataata gtatctgtaa gctctatatc atcataacag cctgatggct
    11641 catctacacc aaaagtttgc ataaaaccaa ccactgcaga ggccatacaa tgtcttgcat
    11701 ttggatcgat attatttgtt ctaaaacccg cttttgcaag ctttaaagca gcataacctt
    11761 cttggatagt gtattgccca ctaccaaaaa tccctatacc tgtaacgccg agttcattgt
    11821 aggctttttt aaattgtttt tccatttcat caaaggctct ttgccaagaa acttgttgaa
    11881 atttgccttt tttatcaaat tcgccttttt cattcatgcg aagcaaaggc ataacaagac
    11941 gatcttcacc atacatgatc ttagcattaa aataaccttt gatacaatta agtccgcgat
    12001 ttacgggtgc tgcaggatca ccttttgttg ctacgatttt gccatctttt ctggctatca
    12061 taattccaca gccagttcca caaaatctac aaacagcctt atcccatttc caatcttctt
    12121 cttgtgcacc aagcatagag cttggaacac taagtcctgc aacactagca gcacttgcaa
    12181 tagcggtatt tttaataaaa tcccttctat tcatccttat tcctccaaaa taaaaaaatc
    12241 atcttattat aaaaaatgga gtataaaaat ctcttgaaat tttaataaaa ataataattt
    12301 taaagctcta ttttatagga gttttattgt cctttttata ttattcttac acaaaataaa
    12361 tattaaaaat aatcaactta acaattaaaa tataatcaac ttaaaataat aaaaaaatga
    12421 agatataaaa attaagccct aagaatgggc ttaatcaaaa ttaatggcaa ccacaaccac
    12481 cgcagcagct agaaccacca aaaaatgcat caagttttgc aatatctggc atttctgtga
    12541 tttcatttac aagttcttta tatgccactt taccctcttt aatcacaaat acggcacgag
    12601 ctaaaagccc ttctaaagca ccttcattta tcaaaacacc atatttttca ccaaattctt
    12661 ttgccacaaa atcacttgca acacttaaat tttcaatacc ttctgtactg caaaatcttc
    12721 ccatagcaaa aggtaagtcc atacttacta caatcacttc agcaccattg taactggcta
    12781 cttttttatt aaattctcta gcctctgtag cacaaactgg tgtatctaaa cttggaacac
    12841 ttaaaatgat ttgagtttta cccgctgcac cgatttcaat cacgcttaaa tctttagctt
    12901 taagatttac cttaggagca tctgctccaa cttctactga atttccttta agttttacag
    12961 gatttccttt aaaatttact atactcattt aatttccttt tttgatattt taaacattat
    13021 tgcaattaat gttttaggag taattatatc ctataaatat taattatttt ttaatttcac
    13081 tcaaaattat tttacttctt tccaagtata ttttttccac actttttgag cttcctgact
    13141 cttaataaaa tctacaaatt ctaaagcttt tttattttct aaaccttttt ttgtaggagc
    13201 tatttcagct gcacgataaa tcactgcatt tttatctttg ataaataaag ctttatcatc
    13261 gcctaaagcc tttgcccaat gagaccaaat gattaaagca tcaatatttg gattgttatt
    13321 ccactcatct acagcagctt tggaattttt agcataaatt tttatatttt tacgtaattt
    13381 taccaaattt tctctttttg cactttttaa agccatatct tcataaagtc caacttgtcc
    13441 tgcaccatca accaccataa catttatgcc atcttttaaa atgtcttcaa aatttttaat
    13501 attttttgga ttatttggac gcacgataat acctgatgga cgcacattta aaacgcttaa
    13561 attttccaaa cttaaacttg gaattttttt agcaaaatca tccatcattg aagtattgcc
    13621 tgaaaaaatc aaatctgcat tttcttttgc tttgtctacc caagctggag ttggacctgc
    13681 ggttacaatc accttttctt ttgttttttc ttcaaatttt aaagcaagct cttttagcac
    13741 aggagcagga ccacctggac cataaactaa aatttcagca tttaaaaaac ttgctgctaa
    13801 acttaaaatt aatatttttt tcataaaata aacctttctt tgataatata aaggaaattg
    13861 tatcaatcta tagttaactc tcccttgcaa agccctgctt ctataagaaa acgagaagga
    13921 gcgaaagaag tttttttatt tttatcatat ttagcatagc ttaaataaag tatatttttt
    13981 gccctagtta ctgcaacata aaaaagcctt ctttcttctt ctaagcttcc acccattccc
    14041 ataagctttt gattaggaaa gcgaccttgc gcaagatcaa tcacaaaaac aagatcaaat
    14101 tccaagccct tacttgcatg tacgctaagc aaattaactc ctttgccact actcatttca
    14161 cttgcaccta aagttaaaaa attataatac ttataaatat cgctataatt ttttgtaagc
    14221 tcttttaaga cattaaattt tgtttctatt ttttctaaat tttcactctt tcttaataaa
    14281 tccacctgcc ctgctttgtt cgtcgctctt ttagttgcaa gttcttcgca aatttctcta
    14341 taaaaagaat tttcgcaaat taaattgact aaagtcaaag aatgttttat ttccatagct
    14401 ttttttaaaa aaagatagat tttttccaaa tttctagcgc acaaatcatt gatttttgaa
    14461 agtcttaaaa taggatgtgc gtcaaattca ctctcaaatt taaaacgagt ttcgctagct
    14521 aattcttcta aatctgcaaa aagcccaagt tgataatttc ttttttgatg attttgcaaa
    14581 tttacatttt tatcaggatc taaaaaacct tttattaaat ttccatgccc taattttaaa
    14641 agtgcgtcaa aaatttcttt tgctaaaact ccacccacac ctttggtata ttgaaccaaa
    14701 tgaataaaag ccatgatatc cttaggattt accacaagcg caagcatgga gctaaaagct
    14761 ttaacttcca aactttcaaa aaaacttcca cttccctttc tcacacttgc aatgccctgc
    14821 tcccttaaag ctacttcaac cccatcagca cttgagttgt tgcgaaaaat cacggcaatt
    14881 tcttccaaac ttactccgct tgtaagtatc attttggcta tattttgata ctgatcaaat
    14941 aattcttcaa aagtaagcaa agatggggct ttaaactcat catttcttgt aacaataagt
    15001 tcttttggat ataatctttc gttatttaaa atcactttat tagccaaagc taaaatactt
    15061 cttgatgaac ggtagttttt atttaaagaa aaaatttttg catctttaaa acgatcttta
    15121 aacccaccta tgatattaat atccgctcca ttaaaagcat aaatactttg atcataatcc
    15181 cctacgcaaa acaaactttt actatgaaaa gcctctatta aagaactttg caaagtattt
    15241 gtgtcttgat attcatctac taaaatttca tcaaattcat atttttcttc ttttaaaaga
    15301 tcttttagat tgataagcaa gtcattaaaa tccacataat taaaacgctt tttttcatta
    15361 tcatattctt ttaaaatatc ttcataaatt tcagcataaa tactttgatc ttcatagttt
    15421 tgacaaaacc aagtataaaa atcttgattg tgtgctttgt tttgaaacaa agaataaaga
    15481 tcgtataaat aacttgattg ataaggtttt atatcactta aatgcctaaa agttcttttt
    15541 tcatagacac ttttaagtag agtttttaac tcgcttgctt gctttaaggc tatattttta
    15601 tccgcatttc taagtaaggt ataagccgta ctatgaaaag ttcctgcaag tattttactg
    15661 gtaatatttt tatcaaaaaa tttccctaaa cgccctatca tttctttgct ggctttattt
    15721 gtgaaagtca aaagcatgat tttttgaggt gccactccct tgcttaaaag ataagaaatt
    15781 cttgcaacaa tagtagaagt ttttcccgtc cctgcacttg caataacaag attgtgtcca
    15841 aaatcagcag tagcggcaag atattgttca ttatttaatt ttgaaagtgg cat
//
LOCUS       DAPIVO010000046        13875 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.046, whole genome shotgun sequence.
ACCESSION   DAPIVO010000046 DAPIVO010000000
VERSION     DAPIVO010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13875)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13875)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13875
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.046"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            60..1091
                     /gene="pseI"
                     /locus_tag="RJ239_001284"
     CDS             60..1091
                     /gene="pseI"
                     /locus_tag="RJ239_001284"
                     /EC_number="2.5.1.97"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid synthase"
                     /protein_id="HDV7331401.1"
                     /translation="MQIGNFNTDKKVFIIAELSANHAGSLEMALQSIKAAKKAGADAI
                     KIQTYTPDSMTLNSNKEDFIIKGGLWDKRKLYKLYESAKTPYEWHSQIFETAQNEGIL
                     CFSSPFAKEDLEFLKRFDPIAYKIASFEANDENFVRLIAKEKKPTIVSTGIATEEELF
                     KICEIFKEEKNPDLIFLKCTSAYPTAIEDMNLKGIASLKEKFNVEVGLSDHSFGFLAP
                     VMAVALGARVIEKHFMLDKSIESEDSKFSLDFDEFKAMIDAVRQAESALGDGKLDLDE
                     KALKNRVFARSLYASKDIKKGEMFSEENVKSVRPSFGLHPKFYQELLGKKATKDIEFG
                     DALKQGDFT"
     gene            1088..2059
                     /gene="legB"
                     /locus_tag="RJ239_001285"
     CDS             1088..2059
                     /gene="legB"
                     /locus_tag="RJ239_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,6-dehydratase LegB"
                     /protein_id="HDV7331402.1"
                     /translation="MKNILVTGADGFIGSHLCESLVKKGFKVRALSQYNSFNFWGHLE
                     KSPFLKDMEVVSGDLRDSFFCEKITKNIDAIFHLGALIAIPYSYTAPQSYVDTNVNGT
                     LNMLEAAKKNEISHFIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSY
                     YNSFNLNVNIARPFNTYGPRQSARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDT
                     CEGFISLLNLKHFGEVYNIGSGVEYSMQEVLNLIQKILDSKVKIIQDEQRLRPKNSEV
                     FRLCCDANKLKKATNWQSKISLEEGLRQSIEYFKENLENYKSELYNV"
     gene            2052..3206
                     /gene="legC"
                     /locus_tag="RJ239_001286"
     CDS             2052..3206
                     /gene="legC"
                     /locus_tag="RJ239_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase LegC"
                     /protein_id="HDV7331403.1"
                     /translation="MFEKEISFIKSLFNKENIALHEPCFIGNEKKYLLECIDSGFVSS
                     VGEFVTRFEEALKEKTKARFVIATNTGTAALHIALLANGIDENCEVITQSISFVATAN
                     AIAYTGAKPVFLDIDENTLSLSPKALEHFLENQTYQKDNLSYNKTTHKPIKACVIMHT
                     FGLSAHIKAIKELCEKYHILLIEDAAEALGSTYENKALGTFGKCGILSFNGNKIITGG
                     CGGAILSDDENLAKLARHLSTTAKIPHPYEYDHDRIAYNYRLCNINAAILLAGLENLE
                     LFLENKRELAKIYKDFFKNHDKCKFIDEKSNEKSNFWLNTLLFKDENLRNIFLEECLK
                     NNIFVRPVWKSLPSLKAFQNCQSNELINTKKLEKRLINLPSSVRIANKKE"
     gene            3318..3860
                     /locus_tag="RJ239_001287"
     CDS             3318..3860
                     /locus_tag="RJ239_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferase"
                     /protein_id="HDV7331404.1"
                     /translation="MKNVIIIGAGGFTRELYSYLKDANYEIIGYIDIQENNFFDLKYL
                     GNEDNFDKKLIQKASFALGVGQINLRKKILVKLSKKSCNFITFIHPQSFVSKEAKIGQ
                     GVIVCPFVTINANSNIGDFVLCNIYSSIAHDCKVGEGSILSPYATLNGNSSIGKNCFL
                     ATRVSLLPCVNLEDNCIVSR"
     gene            3933..4253
                     /locus_tag="RJ239_001288"
     CDS             3933..4253
                     /locus_tag="RJ239_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase"
                     /protein_id="HDV7331405.1"
                     /translation="MKEINIIDFGLMGKQISALFYLLGYEIGVYNKSKLNIYEFEKQI
                     KLLQRKIDFSNFNAGKINIYQHIEDLKNSLTIESLNEDLNLKKEIMQILRDNNIVFSR
                     VWMI"
     gene            4241..4627
                     /locus_tag="RJ239_001289"
     CDS             4241..4627
                     /locus_tag="RJ239_001289"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331406.1"
                     /translation="MDDLNCDFIHFFNTIYIKLIELCGSNLERFTPLKDLKKLGFHII
                     CSKGNRGALANLLLFNEISSFFKIIEKYDYNFKECQTVYDLLYEKRNLLNIIDTIGIE
                     LCNKICKNLKEDDENFYHPKIFKKAL"
     gene            4744..5865
                     /locus_tag="RJ239_001290"
     CDS             4744..5865
                     /locus_tag="RJ239_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl sugar amidotransferase"
                     /protein_id="HDV7331407.1"
                     /translation="MIYCDHCVMPNTRPGINFTKDKEGKNICSACINHKNKENIDYKA
                     RFKELEALCDKYRRMNGKFEYDCAIAVSGGKDSHFQVHIMKEKLGMNPILFSVEDNFT
                     MTEAGKKNLRNLSETFGCHIISLKPDIKTQKKVMLKTFEKYGKPTWFIDRLIYSYPFA
                     MALKFNTPLLVYGENVSYEYGGSDDKETPSAKEIFLNGTASDLDINEFIDNEIKEENL
                     QLFFNPNANDINKLNPIYLSYFVKWNSYSNYIFAKSRGFTDLEGEWDRTMCAENFDQV
                     DSIGYILHAWMKYPKFGHACASDYAARFVRYGLLSRKEAIELVQKRDHKLDNKCVEDF
                     CNFIGISKTTFWKIVEKHYNMDLFYKNDFGEFKLKNKLQ"
     gene            5883..6558
                     /locus_tag="RJ239_001291"
                     /pseudo
     CDS             5883..6558
                     /locus_tag="RJ239_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344715.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
     gene            6598..7602
                     /gene="legI"
                     /locus_tag="RJ239_001292"
     CDS             6598..7602
                     /gene="legI"
                     /locus_tag="RJ239_001292"
                     /EC_number="2.5.1.101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,N'-diacetyllegionaminate synthase"
                     /protein_id="HDV7331408.1"
                     /translation="MKKTLIIAEAGVNHNGDLNLAKKLIEVAADSGADFVKFQSFKAK
                     NCISIKAKKAPYQLKTTASDESQLQMVQKLELDLKAHKELILHAKKCNIAFLSTPFDL
                     ESVDLLNELGLKIFKIPSGEITNLPYLKKIAKLDKKIILSTGMANLGEIEQALNVLCK
                     NGTKRQNITLLHCTTEYPAPFDEVNLKAMQSLKDAFKLDVGYSDHTRGIHISLAAVAL
                     GACVIEKHFTLDKNMSGPDHKASLEPQELKMLCTQIRQIQKAMGDGIKKASKSEQKNI
                     NIVRKSLVAKKDIQKGEIFNEGNLTTKRPANGISAMRYEEFLGKIATKNYKEDELIRE
                     "
     gene            7595..8749
                     /gene="legG"
                     /locus_tag="RJ239_001293"
     CDS             7595..8749
                     /gene="legG"
                     /locus_tag="RJ239_001293"
                     /EC_number="3.2.1.184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-N,N'-diacetylbacillosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HDV7331409.1"
                     /translation="MSKRKICIVSATRAEWYLLRILCHEIQNDKDLSLQIIATGAHLS
                     PEFGLTYKEIEKEFKITKKIPILLANDDKISLCKSMSLAFSAFSDAFEDLKPDMVVIL
                     GDRYEMLSVASVCLLMHIPLVHLCGGELTLGAIDDSIRHSISKMSHLHFVSHEIYKKR
                     LLQLGEEEKRVFNIGSLASTIIKNMNFLNKKDLEKALEMKLDKELYLITYHPLTLNVK
                     NTQKEIKTLLKKLDTLKNASLIFTKANADENGLLINEILQNYCQKNSHKAKLFDNLGS
                     QKYLSLMKIAKAMIGNSSSGISESPFFKTPCINIGDRQKGRLRTQNIIDSEINDLDQA
                     FEKLESKEFKQNLKNFKNPYDNGKNPNKIIKTCLKNVNLDTILHKNFIDL"
     gene            8758..9783
                     /locus_tag="RJ239_001294"
     CDS             8758..9783
                     /locus_tag="RJ239_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HDV7331410.1"
                     /translation="MDINKLKLTPDSSIKEALKIVGQERVRLGIIVDKKDKFLGVISD
                     SNIRKALISGKTLKDSIKDIYTKNPITIKENTSKEQLLKLSSKTDIYDFPVLDEKGQI
                     LSIKSISSLLKANPNSIIIMAGGLGSRLKELTKDTPKPMLKVGKKPILESIVQRLKNQ
                     NFENFIFCVNYKKQIIEDYFQKGQKFGVKISYIKERKKLGTAGALSLIKQEFKESFIV
                     MNADILTELDFNALLKAHKKSKALMSVCVREFEQQIPYGVITQKQGFIENIEEKPTQK
                     FLVSAGIYVLENEILNLIAKNEYLDMPELIKLVLQKGKVNTYIINDYWIDIGRPDEFL
                     KANEDFK"
     gene            9780..10685
                     /gene="ptmF"
                     /locus_tag="RJ239_001295"
     CDS             9780..10685
                     /gene="ptmF"
                     /locus_tag="RJ239_001295"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glutamine-D-fructose-6-phosphate isomerase
                     subunit"
                     /protein_id="HDV7331411.1"
                     /translation="MKILIIGFGSIGKKHFLALKNLNHEVSLLSLSAKKEEFKNTPIY
                     RSLKECDLNEFDLFIIANITTEHFNTLKTLDELVKDKTILVEKPLFEKSQNFTSSKNH
                     IYVAYLLRFNPVIVALKRLLKGEKIYFASLVCNSYLPHWRALDYRQNYSAKKELGGGV
                     LLDLSHEIDLAFFLFKDLELIYSQNAKISELDITSDDFAFLALKNSQETKIHIELDYF
                     SKFNKREMTIHTLEKSFKADLINNKIKIYHKNQSQKILNFENNTIKTLQNLHQAVFEK
                     NNKLCDLKQALKVLEICDKVRKKNG"
     gene            10678..11385
                     /gene="legF"
                     /locus_tag="RJ239_001296"
                     /gene_synonym="ptmB"
     CDS             10678..11385
                     /gene="legF"
                     /locus_tag="RJ239_001296"
                     /gene_synonym="ptmB"
                     /EC_number="2.7.7.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMP-N,N'-diacetyllegionaminic acid synthase"
                     /protein_id="HDV7331412.1"
                     /translation="MAEILCTICARGGSKGVKNKNIRKINKLEMIAYSIIQAQNSKLF
                     KHIVISTDSDEIASVAQKYGAEVFFKREAHLANDQAAKLPVMRDALLRSEEHFKTRFE
                     TLIDLDASAPLRSSLDIKKAYESFVENDNSNLITAVPARRNPYFNLVEIQNNKVVKSK
                     EGNFTTRQSAPKCYDMNASIYIFKRDYLLENDSVFGKNTGLFVMDESTAFDIDSELDF
                     KIVEFLISLKNLSPKDF"
     gene            11385..12155
                     /gene="ptmA"
                     /locus_tag="RJ239_001297"
     CDS             11385..12155
                     /gene="ptmA"
                     /locus_tag="RJ239_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin modification protein PtmA"
                     /protein_id="HDV7331413.1"
                     /translation="MLENKIIFVAGACGRIGKALCEKILLSKGIPILADINKECLNKL
                     QENLETNFKTKLLSLELDITKQESLQTALQKSQERYGKIDAFVNSSYPFGKDWGKTPY
                     YELKYEQICESLNLHLAGFMLAAQEFVKFFKQQGYGNIINLSSIMGVYAPKFENYEGT
                     SMQSSLEYSVIKAGINHMSSWLAKELFNQNIRVNTLASGGILDNQNELFLKAYRKCCA
                     SKGMLDADDICGTLVFLLSDESRFITGQTLVVDDGWGL"
     gene            12143..>13875
                     /gene="pseD"
                     /locus_tag="RJ239_001298"
     CDS             12143..>13875
                     /gene="pseD"
                     /locus_tag="RJ239_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin modification protein PseD"
                     /protein_id="HDV7331414.1"
                     /translation="MGLMMTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILG
                     KDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ
                     NKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFF
                     QFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNL
                     PQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPIL
                     AKHNIKPDYVLSLERIPLTSEFFNNDFGEFDKDILFVLKSYVHPHTTKYLQKNNRNFM
                     LVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAKDGLSH
                     TKDYSNLDKHEGHFQRDKNKYTTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYI
                     TTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKV
                     YQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQENETLIKEIIKDIDKIKTQIDELYNT
                     QKDLMQILGPLL"
BASE COUNT         5345 a         1965 c         2240 g         4325 t
ORIGIN      
        1 aaatatataa tataattata tatcatttta gtcaggaaat ttaccaaaga aagaaaagta
       61 tgcaaatagg aaattttaac accgataaaa aggtttttat catagcagaa cttagtgcaa
      121 atcacgcagg aagtcttgag atggcacttc aaagtataaa agctgccaaa aaagcaggtg
      181 ctgatgcgat aaaaattcaa acttacactc cagatagcat gactctaaat agcaacaaag
      241 aagattttat tattaagggt gggctttggg ataaaagaaa actttataag ctttacgaaa
      301 gcgcaaaaac tccttatgaa tggcattctc aaatctttga aaccgcacaa aatgaaggca
      361 tactttgttt ttcaagtcct tttgccaaag aagatttaga atttctaaaa cgctttgatc
      421 ctatagccta taaaatcgct tcttttgaag ctaatgatga aaatttcgtg cgtttaatcg
      481 ccaaagaaaa aaaacctact atcgtttcaa cgggcattgc tacagaagaa gaacttttta
      541 aaatctgtga aatttttaaa gaagaaaaaa atcctgattt aatcttttta aaatgcactt
      601 cggcttatcc tactgccata gaagatatga atttaaaagg catagcaagt ttaaaagaaa
      661 aatttaatgt tgaagtggga ctaagtgatc atagctttgg ttttttagcc cctgttatgg
      721 cagtagcact tggagctaga gtgatagaaa agcattttat gttagataaa agcatagaaa
      781 gtgaagacag taaatttagt cttgattttg atgaatttaa agctatgata gatgcagtaa
      841 gacaagctga aagtgcttta ggcgatggta agttagatct agatgaaaag gcgcttaaaa
      901 accgtgtttt tgcaagaagc ttatatgcaa gtaaggatat caaaaaaggt gaaatgttca
      961 gcgaagaaaa tgtaaaatcc gtgcgtcctt cttttggact acatcctaaa ttttatcaag
     1021 aacttttagg aaaaaaagct actaaagata tagaatttgg tgatgcttta aaacaaggag
     1081 attttacatg aaaaatattt tagttacagg tgctgatggt tttataggct ctcatctttg
     1141 tgaaagtttg gtcaaaaaag gttttaaagt cagagcttta agtcagtata attcttttaa
     1201 tttttgggga catttagaaa aaagtccttt tttaaaagac atggaagttg taagtgggga
     1261 tttaagagat agtttttttt gcgaaaaaat caccaaaaat atagatgcga tctttcatct
     1321 tggcgcctta atcgccatcc cctactccta cacagcccca caaagctatg tggataccaa
     1381 tgtcaatggc actttaaata tgctcgaagc agctaaaaaa aacgaaattt cgcattttat
     1441 ccacacctca acaagcgaag tttatggcac ggccttttat gtgcccatcg atgaaaaaca
     1501 ccctttacaa cctcaaagcc cttattctgc aagcaaaatc gctgcagata tgatggcgct
     1561 gagttattat aattctttta atttaaatgt caatattgca cgccctttta acacctatgg
     1621 accaagacaa agcgcaaggg ctatcatacc taccatcatc acacaaattt taagcggagc
     1681 aaaggaaatc aaactaggag atttaagccc taaaagggat ttaaattttg tgctagatac
     1741 ttgcgagggt tttatctctc ttttaaattt aaaacatttt ggagaagttt ataatatagg
     1801 ctcaggagtg gaatactcca tgcaagaagt acttaatctc atacaaaaaa ttttagattc
     1861 taaggtaaaa atcatccaag atgagcaaag attgcgtcct aaaaatagcg aagtttttag
     1921 actttgttgc gatgcaaaca agcttaaaaa agctacaaat tggcaaagca aaataagtct
     1981 agaagaaggt ttaagacaaa gcatagagta ttttaaagaa aatttagaaa attataaaag
     2041 tgagctttat aatgtttgaa aaagaaattt cttttataaa aagtcttttt aataaagaaa
     2101 atatcgccct acatgagcct tgctttatag gcaatgagaa aaaatatctc ttagaatgta
     2161 tcgatagcgg ttttgtttca agcgtaggag aatttgtaac gcgttttgaa gaagctttaa
     2221 aagaaaaaac caaagcacgc tttgtcatcg ctacaaatac aggtacagca gcccttcata
     2281 tcgctttatt agctaatggt atcgatgaaa actgcgaagt catcactcaa agcataagct
     2341 ttgtcgctac ggccaatgct atcgcttata caggtgcaaa acccgttttt ttagatatag
     2401 atgaaaacac tctaagttta agtcctaagg ctttagagca ttttttagaa aatcaaactt
     2461 atcaaaaaga taatcttagc tataacaaaa ccacacacaa acccatcaaa gcttgtgtta
     2521 ttatgcacac ctttggttta agcgctcata taaaagccat caaagagctt tgtgaaaaat
     2581 accacatcct tttaattgaa gatgctgcag aagccttagg aagcacctat gaaaacaagg
     2641 ccttaggcac ttttggaaag tgtggaattt taagctttaa tggtaataaa atcatcacag
     2701 gtggatgcgg tggggcgata ttaagcgatg atgaaaattt agccaaactt gcaagacacc
     2761 ttagcaccac agctaaaatc ccccatcctt acgaatacga tcatgatagg atagcttata
     2821 attaccgtct ttgcaatata aacgcagcaa tcttgcttgc aggacttgaa aatttagaac
     2881 tttttttaga aaacaaaaga gaacttgcta aaatttacaa ggattttttt aaaaatcacg
     2941 ataaatgtaa atttatcgat gaaaaaagca atgaaaaaag caatttttgg ctcaatacct
     3001 tgctttttaa agatgaaaat ttaagaaata tctttttaga agaatgcttg aaaaataata
     3061 ttttcgtccg tcctgtatgg aaaagcttac cgagtttaaa agcttttcaa aactgtcaaa
     3121 gcaatgagct tataaacact aaaaaattag aaaaacgctt gattaattta cctagtagcg
     3181 ttagaatagc aaataaaaag gaatgatgcg ttgcaaaatt taattcaaag cattaaaaaa
     3241 atttaataag aaaaaatatg agaatagcgg cggggggggg gatttgattt ttttacttct
     3301 tcttttagga gaagtgcgtg aaaaatgtca tcatcatagg agcgggtggc tttactagag
     3361 agctttattc ttatttaaaa gatgcaaatt acgaaattat aggctatatt gatatacaag
     3421 aaaataattt ttttgactta aaatatctag gcaatgaaga taatttcgat aaaaagttga
     3481 ttcaaaaagc atcttttgct ttaggtgtag gacaaatcaa tttaagaaaa aaaatccttg
     3541 taaaactttc aaaaaaatca tgtaatttta tcacttttat acatcctcaa tcttttgttt
     3601 caaaagaagc taaaatagga caaggggtta tagtgtgtcc ttttgtaacc attaatgcta
     3661 attcaaatat aggagatttt gtgctttgta atatttattc aagcatagct catgattgta
     3721 aagtaggaga aggaagtatt ttaagccctt atgctacact taatggaaat tcaagcatag
     3781 gaaaaaattg ttttttagct actagagtta gcctgttgcc ttgcgtaaac ttagaagata
     3841 actgcatagt aagcaggtag tattattagc aaaaactaca catccaatca acttattttt
     3901 cataaaaata taattaaaac aaggaaaaaa caatgaaaga aattaatatc atagactttg
     3961 gtttaatggg taagcaaata agtgctttat tttatttatt aggctatgaa ataggtgttt
     4021 ataataaaag caagctcaat atatacgaat ttgaaaaaca aataaaactt ctacaaagaa
     4081 aaatagattt ttctaatttt aacgccggaa aaataaacat ttaccaacat atagaagatc
     4141 ttaaaaatag cttgactata gaaagcttaa atgaagattt aaatttaaaa aaagaaatca
     4201 tgcaaattct tagagataat aatatagttt tttcgagagt atggatgatt taaactgcga
     4261 ttttatacat tttttcaata ctatttatat caaattaata gaactttgtg gttctaattt
     4321 agaacgattt accccattga aagatcttaa aaaattagga tttcatatca tttgcagtaa
     4381 aggcaatcga ggagctttag caaatttact tttgttcaat gaaatttcat cattttttaa
     4441 aattatagaa aaatacgatt ataatttcaa agaatgtcaa acagtttatg atttgcttta
     4501 tgaaaaaaga aatttgttaa atattatcga cactataggc atagaacttt gtaataaaat
     4561 ttgtaagaat ttaaaagaag atgatgaaaa tttttaccat ccaaaaatct ttaaaaaggc
     4621 cctataaaaa ggaattttag gtagaaaaat aaaacaaaca taagtgatat tttataaaat
     4681 aagcaaatat taatttaata ttttatacaa tctaatattt ttattaaatt gaaggggtgg
     4741 ggaatgattt attgtgatca ctgcgtgatg ccaaatacta gacctggtat taattttaca
     4801 aaagataaag aaggtaaaaa tatctgttca gcttgcatca atcataaaaa taaagaaaat
     4861 attgattata aagcaagatt taaagagctt gaagccttat gcgataaata ccgcagaatg
     4921 aatggaaaat ttgaatatga ttgcgctatt gccgtaagtg gaggtaaaga ttcgcatttt
     4981 caagtgcata tcatgaaaga aaaacttgga atgaatccta ttctttttag cgttgaagat
     5041 aatttcacca tgactgaagc aggtaagaaa aatcttagaa acttaagtga aacttttggt
     5101 tgtcatatta ttagcttaaa gcctgatatc aaaactcaaa aaaaagttat gctaaaaacc
     5161 tttgaaaaat atggaaaacc cacttggttt attgatagac tgatttacag ctatcctttt
     5221 gctatggctt taaaatttaa tacaccttta ttggtttatg gagaaaatgt tagttatgaa
     5281 tatggaggta gtgatgacaa agaaactcct agcgccaaag aaatattttt aaatggtaca
     5341 gctagtgatt tagatataaa tgaatttata gataatgaaa tcaaagaaga aaatctacaa
     5401 ctctttttta atcccaatgc aaatgatatc aacaaactta atcctattta tctaagttat
     5461 tttgtaaaat ggaattctta tagcaattat atttttgcta aaagtcgtgg ttttactgat
     5521 ctagaaggcg aatgggatag aacaatgtgt gcagaaaatt ttgatcaagt tgatagtata
     5581 ggctatatcc tacacgcttg gatgaaatac cctaaatttg gtcatgcttg tgcgagtgat
     5641 tacgcagctc gtttcgtgcg ttatggactt ttaagcagaa aagaagctat tgaacttgtg
     5701 caaaaaagag atcataagct tgacaataaa tgcgttgaag atttttgcaa tttcataggt
     5761 attagtaaaa ctacattttg gaaaatagta gaaaaacatt acaatatgga tttattttat
     5821 aaaaatgatt ttggagaatt taaattaaaa aacaaattac aataaaaata taaaggaaaa
     5881 aaatgcaaaa ctcattagaa gcttatacaa tgaaatataa tgaaaatgga tacggattac
     5941 tttttccaga tggtcatgta gtacgttttt atgaaagaat tttaaaatac aaactaaata
     6001 aaataaatgg aaatttactt gattttggtt gtggcaatgg tgtacattca gcgtattttc
     6061 aaagcaaagg gtttaaaact tttggaatag atatagttcc aagtttaaaa gaaatttggg
     6121 agcaaaatat tagggggggg gggatattgt aaaattatag aaccaaattc tagtatcaaa
     6181 ggactttttg atgaaaatat ggatatcatc tttgcaaatc aaagtcttta ctatataccc
     6241 ttaaaagaac ttaaacaaaa tattttagaa ttttacgaac ttttaaacac aggtggaata
     6301 ctttttgcta caatgatgag caagaaaaat tattattttt cccacagtca aaaagaagaa
     6361 aaaaatggct tgagtaaagt tgaaattaat ggaagattaa atgaaacaag ctttatacat
     6421 tttattgata aagcccaaga tctagaaaat ctttttcaac cttttgaaac tttattttta
     6481 ggagattatg atcctattaa tttttataat tttgaaggat cagcacacca ttacatttat
     6541 gtaggtatta aaaaataaaa ttttgccttt attttaaggc aaaataaagg caaaactatg
     6601 aaaaaaactc ttatcatcgc agaagcaggg gttaatcaca atggtgattt aaatttggct
     6661 aaaaagttaa tagaagtcgc agcagactca ggggctgatt ttgttaaatt tcaaagtttt
     6721 aaagccaaaa actgcatcag tataaaggct aaaaaagcac cctatcagct taaaaccaca
     6781 gctagcgatg agagtcaact tcaaatggtg caaaaacttg aactcgatct taaagctcac
     6841 aaagagctta tcttgcacgc aaaaaaatgc aatatcgcct ttctttctac tccttttgat
     6901 cttgaaagtg tagatctttt aaatgagtta ggcttaaaaa tctttaaaat tccaagcgga
     6961 gaaatcacca atctacccta tcttaaaaaa attgcaaaac ttgataaaaa aatcatactt
     7021 tcaaccggca tggcaaattt aggcgagata gaacaagctt taaatgtgct ttgcaaaaac
     7081 ggtactaaac gccaaaacat cactctttta cactgcacta cagaataccc tgcccctttt
     7141 gatgaggtca atctgaaagc catgcaaagc ttaaaagatg cttttaaact tgatgtgggc
     7201 tattctgatc acacaagggg catacacatt tccctagctg cggttgcctt aggagcttgt
     7261 gtgatagaaa agcattttac cctagataaa aatatgtcag gacctgatca taaagcaagt
     7321 ttagaacctc aagaactaaa aatgctttgc acccaaataa gacaaataca aaaggcaatg
     7381 ggtgatggca taaaaaaagc aagtaaaagc gaacaaaaaa atatcaacat agtaagaaaa
     7441 agtttagtcg ctaaaaaaga tatccaaaaa ggagaaattt ttaacgaagg aaatcttact
     7501 accaaacgcc ccgcaaatgg tataagtgct atgagatatg aagagttttt aggtaaaatt
     7561 gctactaaaa actacaaaga agatgagctt atccgtgagt aaaagaaaaa tttgtatagt
     7621 cagtgcaaca agggctgaat ggtatctttt aagaatttta tgtcatgaaa ttcaaaacga
     7681 taaagatcta agccttcaaa tcatcgctac aggagcacac ttaagccctg agtttggact
     7741 cacttataaa gaaatagaaa aagaatttaa aatcactaaa aaaatcccta tcctgcttgc
     7801 aaacgatgat aaaataagcc tttgtaaaag tatgagttta gcttttagtg cttttagcga
     7861 tgcttttgaa gacttaaaac ctgatatggt ggtgatttta ggcgatcgtt atgaaatgct
     7921 tagcgtagca agtgtatgtc tattgatgca cataccttta gtgcatttat gtggcggaga
     7981 gcttacttta ggggctattg atgatagtat aagacacagc atttcaaaaa tgtcacattt
     8041 acattttgta agtcatgaaa tttataaaaa aaggcttttg caacttggag aagaagaaaa
     8101 aagggttttt aatataggtt ctttagcttc tactatcata aaaaatatga attttttaaa
     8161 caaaaaagat ttagaaaaag ccttagaaat gaaactagat aaagaacttt acttaatcac
     8221 ttatcatcct ttaactttaa atgtaaaaaa tactcaaaaa gagattaaaa ccttacttaa
     8281 aaaacttgac acccttaaaa atgcaagttt gatttttacc aaagcaaatg ccgatgaaaa
     8341 tggactttta atcaatgaaa ttttgcaaaa ttactgccaa aaaaactcac acaaggctaa
     8401 actttttgat aatcttggct cacaaaaata cctaagtctt atgaaaatag ccaaggccat
     8461 gataggcaat tcttcaagtg gtattagtga aagtcctttt tttaaaactc cttgcattaa
     8521 tataggcgat agacaaaaag ggcgtttaag aactcaaaat atcattgatt ccgaaatcaa
     8581 cgatcttgat caagcttttg aaaaattaga aagcaaagaa tttaaacaaa atttaaaaaa
     8641 ttttaaaaac ccttatgata atggtaaaaa tcccaataaa atcataaaaa cttgcctaaa
     8701 aaatgtaaat ttagatacaa ttttacataa aaatttcatc gatttataag gcttagtgtg
     8761 gatataaaca aactcaaact cacccctgat tctagcataa aagaagcttt aaaaatagtc
     8821 gggcaagaac gcgttagatt aggcattata gttgataaaa aggataaatt tttaggagtc
     8881 attagcgatt caaacatcag aaaagcttta attagtggca aaactttaaa agatagtatc
     8941 aaagatattt acactaaaaa tcccatcacc ataaaagaaa acacaagcaa agaacagctt
     9001 ttaaaacttt catctaaaac cgatatttac gactttcctg ttttagatga aaaagggcaa
     9061 attctttcta taaaatctat ctcatcactt ttaaaagcta atccaaactc cattatcatc
     9121 atggctggag gcttaggctc tcgcttaaaa gagctgacta aagatactcc aaaacctatg
     9181 ttaaaagtag gcaaaaaacc cattttagaa agcatagtcc aaagacttaa aaatcaaaat
     9241 tttgaaaatt ttatcttttg tgtgaattat aaaaaacaaa ttatagaaga ttattttcaa
     9301 aaagggcaaa aatttggggt taaaatttct tatattaaag agcgtaaaaa actaggtaca
     9361 gcaggggctt taagccttat aaaacaagaa tttaaagaaa gttttatcgt tatgaatgca
     9421 gacattttaa ccgagctgga ttttaatgct cttttaaaag cgcataaaaa atcaaaagct
     9481 ttaatgagcg tttgcgtgcg tgagtttgag caacaaattc cttatggagt aatcacccaa
     9541 aaacaaggtt ttatagaaaa tatagaagaa aaacccactc aaaaatttct agtaagtgcg
     9601 gggatttatg tacttgaaaa tgaaatttta aatttaattg ctaaaaatga atacttagac
     9661 atgccagaac tcatcaaact tgtattgcaa aaaggcaaag taaataccta tatcatcaac
     9721 gattattgga ttgacattgg aaggccagat gagtttttaa aagccaatga ggattttaaa
     9781 tgaaaatctt aatcataggt tttggaagca taggaaaaaa gcatttttta gccttaaaaa
     9841 atttaaatca tgaagtaagt ttgctttctt taagtgctaa aaaagaagaa tttaaaaaca
     9901 ctccaattta tcgctctttg aaagaatgtg atttaaacga atttgatctt tttatcatcg
     9961 caaatatcac tacggagcat tttaacacct taaaaacttt agatgagctt gtaaaagata
    10021 aaaccatact cgtagaaaaa cctttatttg aaaaaagcca aaatttcaca agttcaaaaa
    10081 atcacattta tgtagcatat ttactgcgtt ttaatcctgt aattgtggct ttaaaaaggc
    10141 ttttaaaagg tgaaaaaatt tattttgcta gtttggtttg taattcttat ttgccccatt
    10201 ggagagcttt agactacagg caaaactata gcgctaaaaa agagctaggt ggtggggttt
    10261 tactcgatct ttctcatgaa atcgatctag ccttttttct ttttaaagac ttagagctta
    10321 tatactccca aaatgctaaa atttcagagc ttgacataac aagcgatgat tttgcctttt
    10381 tggctttaaa aaattcacaa gaaactaaaa ttcatataga actagactat ttttctaaat
    10441 ttaacaaaag agaaatgacc atccatactt tagaaaaaag ttttaaagcc gatttgataa
    10501 acaataaaat caaaatttat cacaaaaatc aaagtcaaaa aatcttaaat tttgaaaata
    10561 atacgataaa aacccttcaa aatttacatc aagcagtctt tgaaaaaaat aataaacttt
    10621 gcgatcttaa gcaagcttta aaagtacttg aaatttgtga taaagtaagg aaaaaaaatg
    10681 gctgaaattt tatgtaccat ttgtgctaga ggtgggagca agggcgttaa aaacaaaaat
    10741 attagaaaga ttaacaaact tgaaatgata gcttatagca tcatacaagc tcaaaattca
    10801 aagcttttta aacacatagt cataagcacc gatagcgatg aaatcgcaag tgtagcccaa
    10861 aaatatggcg ctgaagtttt ttttaaaaga gaagcccatc ttgccaatga tcaggctgca
    10921 aaacttcctg tcatgcgtga tgccttacta agaagtgaag agcactttaa aacgcgtttt
    10981 gaaactctca tagacttaga tgcttcagcc ccgcttcgct caagccttga tataaaaaaa
    11041 gcttatgaaa gttttgttga aaatgataat tccaatctca tcaccgcagt tcctgctaga
    11101 cgcaatcctt attttaacct tgtagaaata caaaataaca aggtagtaaa atccaaagaa
    11161 ggaaatttta ccactcgcca aagtgcccca aaatgctatg atatgaacgc tagtatttat
    11221 atctttaaaa gggattatct tttagaaaat gatagtgttt ttggcaaaaa cacagggctt
    11281 tttgtaatgg atgaaagcac agcttttgat attgatagcg agcttgattt taaaatcgta
    11341 gagtttttaa tctctttaaa aaatttatcg ccaaaggatt tttaatgctt gaaaataaaa
    11401 tcatctttgt agcaggagct tgtgggcgta taggtaaagc gctttgcgaa aaaatacttc
    11461 ttagcaaagg tatccctata ctcgcagata tcaacaaaga atgcttaaat aaattgcaag
    11521 aaaatttaga aacaaatttt aaaacaaaac ttttaagctt agaacttgat atcactaaac
    11581 aagaaagctt acaaaccgcc cttcaaaaaa gtcaagaaag atacggcaaa atcgatgctt
    11641 ttgttaactc aagctatcct tttggcaaag attggggtaa aacgccttat tatgaactca
    11701 aatacgaaca aatttgcgaa agtttaaatt tacatttagc aggctttatg ctagccgctc
    11761 aagaatttgt gaaatttttt aaacaacaag gctatggtaa tatcatcaat cttagctcca
    11821 tcatgggagt ttatgcgcca aaatttgaaa actatgaagg cacttccatg caaagctctt
    11881 tagaatacag tgtgataaaa gcagggatta atcacatgag ctcttggcta gctaaagagc
    11941 tttttaatca aaacatacgc gttaataccc tagcaagcgg gggaatttta gacaatcaaa
    12001 acgaactttt tttaaaagct tatagaaaat gttgtgcgag taaaggcatg ttagatgcag
    12061 atgatatatg tggaactttg gtgtttttgc ttagtgatga gagtagattt atcacagggc
    12121 aaaccttagt ggtagatgat ggatggggct tatgatgacc ttcaccccta ctcaaaaaga
    12181 actctttaac aaaaacattg aggctttaag taatattctt ttaaaagaaa gtttaaaaga
    12241 aattaaatca agtaaatttg aacttatctt aggtaaagat aatctagata taaatttaaa
    12301 agatacaagc gataatactt ttctttatga aaatgttatt gatgaattaa actctatgct
    12361 aaatacttat aatgataaat atctacttta tcctgtatta tatttttatg gttttggaaa
    12421 tggaatttta tttaaagctt tattacaaaa taaaaatcat cagcatattg ttgtttttga
    12481 aaaagatata gaaatcattt ggatcatgtt tcatatctta gatttttcaa atgaattgca
    12541 aaattcaaga ttgatggttt tgcaaacaag ttctttggat atagaatttt tttctaattt
    12601 ttgctctagc aaacctttct ttcaattttc tagaatttat tttttagaac tgatgagtca
    12661 ttattatgaa agatttcatg aagatatttt aggattgaat aaaaaattag cagaaaattt
    12721 taaaaattct attgtttctt atggtaatga tcctcttgat gctcttcaag gcatagaaca
    12781 atttgtttat aacttacctc aaatgatcac tcatcctagt tataaagaat tactttctaa
    12841 aagaaagggt ataagtgata cagctatcat tgtttctaca ggaccatctc ttactaaaca
    12901 attgccttta ttaaaaaagt atgctagtaa agctacgatt ttttgtgcgg attcttctta
    12961 tcctatttta gctaagcata atattaagcc cgattatgtg ctttctttgg aaaggattcc
    13021 tttaacttct gaatttttta acaatgattt tggggaattt gataaggata ttttgtttgt
    13081 tctaaaatcc tatgtccacc ctcatactac aaaatatctt caaaaaaata atagaaattt
    13141 tatgcttgta tctacatatg caagttttat aaattattta aaacttgatg attttgggta
    13201 ttttaatatg ggatttagtg tagctaatat gaatttttta cttgctatac atttaaagca
    13261 taaaaatatc gttttaatag gacaagattt agcttatgct aaagatggac tttctcacac
    13321 taaagattat agcaatcttg ataaacatga aggacatttt caaagagata aaaacaaata
    13381 taccactcaa gcttacggag acaatggaaa agttgaaagt tcttttgttt ggactctttt
    13441 tagacataat tttgaacaag atgtggccaa tgcaaaaaaa aattattata ttaccaccta
    13501 caactgtacc gaaggtggag caaggataga aggaactata gaaaaacctt ttttatgggc
    13561 ttgtgagaat ttacttcata aagatttaaa taaacctttt gaaaaattag aacctttaag
    13621 tttaaataaa caaaatgaat ttttacttaa ggcttattat aaagtttatc aaagtattaa
    13681 acattgtaga gattttagta ataaatttat taaaagctat gataaaataa aaaattcttt
    13741 tatgagttta caaaattctc aagaaaatga aacccttatc aaagagatca ttaaagatat
    13801 agataaaatc aaaactcaaa tcgatgagct ttataatact caaaaagatt tgatgcaaat
    13861 tttaggtccc ctact
//
LOCUS       DAPIVO010000047        13642 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.047, whole genome shotgun sequence.
ACCESSION   DAPIVO010000047 DAPIVO010000000
VERSION     DAPIVO010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13642)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13642)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13642
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.047"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            41..1291
                     /locus_tag="RJ239_001299"
     CDS             41..1291
                     /locus_tag="RJ239_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid transporter"
                     /protein_id="HDV7331415.1"
                     /translation="MNTPKWTSHDTRWVLSLFGTAIGAGVLLLPISAGLGGLIPLLVI
                     LVLAFPMTYLAHRNLCRFVLSSSNPKDDITFVAESYFGKGGGFLITLLYFFAILPILL
                     VYSANLTTTLLEFLINQFNFNADLTHAARWWVSFLIVGVLVLISILGENVVTKAMSFL
                     VFPFIIFLFIFSLLLIPQWNLSLFANVDFSVISTSNFWVTLWLVIPVMVFSFNHSPII
                     SSLACYCKKEYGGYAEPRARKIISLAIILMVFVVMFFVFSCALTFTPEDFASAKDQNI
                     NILTFIANKFPEVSLLAYVGPIVALVAISKSFLGHYLGSQEGLNGILYKASNGRIQGK
                     FAQTLTAIITFAIAWLVAYKNPSVIGIIEAIGGPVLAILLFLMPLYCIYRFDILARFR
                     NKFLDLFVLVMGIVAISAAIHDLL"
     gene            1306..2670
                     /locus_tag="RJ239_001300"
     CDS             1306..2670
                     /locus_tag="RJ239_001300"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HDV7331416.1"
                     /translation="MSNLSIFKIGVGPSSSHTLGPMLAGNLFCKKVAKKLDEIDRVGV
                     TLYGSLSLTGKGHLSDKAVIWGLNGLEAKNLSAAIQDEVNKNAIENAQIDFCGEKKLS
                     FNYEKDLIFSKDFLPLHENGMKIKAYDCKGGLVDEETYYSVGGGFVLTAAELEKKGKN
                     SNQNKKKKLDIELNNAKEALELCDKRDWDLAELSYRYELQFHTKEEICAYCLEIWEVM
                     QEVYYNGTHPNEDYLPGKLHLKRRAKGLKERVAMTADPMGIIDFISLYAIAIAEENAS
                     GAKVVTAPTNGACAVIPAVMLYLKNHTIGFSDEKVIEFLLTAMLIGSFYKKNASISGA
                     EAGCQAEIGSASSMAAAAMATVLGANAFKACNAAEMAMEHHLGLTCDPVAGLVQIPCI
                     ERNAFGAIKAISAARMAMTRKSTPMVSLDEVIETMYETGKDMNYKYKETSLGGLATNL
                     KTVC"
     gene            complement(2678..3199)
                     /locus_tag="RJ239_001301"
     CDS             complement(2678..3199)
                     /locus_tag="RJ239_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331417.1"
                     /translation="MAFMNFSGFFYARNDLRLFKIEKKNELKSFFYKDYTLSSYKDDL
                     NLNNEIFFYQSLKEGLFKENDEILVSNLGKKIILFRNFTQNCDNFNETKLKQILLLFF
                     LLLASVFFASLAMINEFGAIDLLFLTICLLLLVMGVINLGLLFKQIRILKSFSKEEMK
                     EFLSQRMKKYTKV"
     gene            complement(3180..4190)
                     /gene="ribD"
                     /locus_tag="RJ239_001302"
     CDS             complement(3180..4190)
                     /gene="ribD"
                     /locus_tag="RJ239_001302"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HDV7331418.1"
                     /translation="MSNFKIQGRQMKEFYMNLALNEAWKYQFLTYPNPAVGCVILDKN
                     EKILAIKAHEKAGLAHAELNAIAHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSI
                     AFVTLEPCSHQGKTPPCAKLFSELGFKKIFISVKDENKIASGGAEFLKKQGIEVEFDI
                     LKEEGKKLLKPFLKWQKGQFKLFKLALSMNGSPFGKIVSNELSRTYAHEIRAVIDLLV
                     VGGETIRKDCPILDARLCKAKAPNLCILSRQNIDNFDKNIPLFKVPNRQIYTQIPSEA
                     KFLMYEGGENFLKIFKDEIDMFLIFQSSSLNDEKNVTIPLNFKPLYRNFLGSDTYGIY
                     EL"
     gene            complement(4395..4482)
                     /locus_tag="RJ239_001303"
     tRNA            complement(4395..4482)
                     /locus_tag="RJ239_001303"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4446..4448),aa:Ser,seq:tga)
     gene            complement(4504..4577)
                     /locus_tag="RJ239_001304"
     tRNA            complement(4504..4577)
                     /locus_tag="RJ239_001304"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4543..4545),aa:Cys,seq:gca)
     gene            complement(4596..4684)
                     /locus_tag="RJ239_001305"
     tRNA            complement(4596..4684)
                     /locus_tag="RJ239_001305"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4648..4650),aa:Leu,seq:taa)
     gene            complement(4694..4768)
                     /locus_tag="RJ239_001306"
     tRNA            complement(4694..4768)
                     /locus_tag="RJ239_001306"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4734..4736),aa:Gly,seq:gcc)
     gene            complement(4840..5592)
                     /locus_tag="RJ239_001307"
     CDS             complement(4840..5592)
                     /locus_tag="RJ239_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331419.1"
                     /translation="MLAFFKGLGVGFLCLLLFVAGVVFNVEFLGKKDSNHDLYFSRNI
                     EVSNTLKPDILYANINFWANENLSSKITLDNSEKAEITNTFNQILERSKKENFCSGAS
                     FSLEPNFSYKDGIQTPKGQRFDANLECEFKENQLADFNKLLNDINSIIAKNNFISVST
                     PAIQTKFSKDTLNNNKENLYKELLKTSYEYEKTYSLDLNKTCVLKNLQVNANTNIAPR
                     MLNAKSDNIELSSPIISKKEQILNAKALFICK"
     gene            5666..6685
                     /gene="mutY"
                     /locus_tag="RJ239_001308"
     CDS             5666..6685
                     /gene="mutY"
                     /locus_tag="RJ239_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HDV7331420.1"
                     /translation="MQKKELEKLQENLLLWYEKNGRKTLPWRNLQSQNCDESLKHIDR
                     AYGVYISEIMLQQTQVKSVLERFYFPFLQKFPTLESLANANEDELLKAWQGLGYYTRA
                     RNLKKAALECVDKFGAKLPKDVEDLKKLSGIGAYTAGAIACFGYDQKVSFVDGNIRRV
                     LSRLFALENPSMKELEKRAKELLNLNHAFDHNQALLDIGALVCVGKNAKCRICPLYDF
                     CQGKFHTELYPRAKKILYESLNLNLFLFEFNKKFAIQKSQDKLYKGMYNFPFFKEGEY
                     KLSKDMGFVGEFKHSYTKYKLNIKVYHQILNNENKNYEFKTLKELESTALSALSLKAL
                     KLIKL"
     gene            complement(6671..7928)
                     /locus_tag="RJ239_001309"
                     /pseudo
     CDS             complement(6671..7928)
                     /locus_tag="RJ239_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344988.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            8094..8951
                     /locus_tag="RJ239_001310"
     CDS             8094..8951
                     /locus_tag="RJ239_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM/SPASM domain-containing protein"
                     /protein_id="HDV7331421.1"
                     /translation="MKFKKIYIELSDICGLKCDFCPSQKGIRGVMSEEKFQNLAYEIS
                     NKAELFTFHLLGDPLLLPNLENYLKIAKDEAMKLEITTSGFYLNSKNQALLLGYENIH
                     QINISLMSFLSQSKISLEQYFKPILELCKKHLEQKSLSFINLRLWNLDANFKAPKSNL
                     KIYEFLAKEFEAKIDANLSKNRLQRHILLHQNKLFKWPNLKDEPLYKKGKCHALKEQI
                     GILSDGSLVPCCLDTKADINLGNVFENNFDKLFKSPRIKMMKKAFEEDKRIEKLCQTC
                     EFFKARLGD"
     gene            complement(8948..9754)
                     /locus_tag="RJ239_001311"
     CDS             complement(8948..9754)
                     /locus_tag="RJ239_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDV7331422.1"
                     /translation="MKKILIIISLFLITLNAKERLVVLDPASIETLFMLKAKDQIVGI
                     ATLQHSNIYPKDQTSKLTSVGTFSNPSLEKIVALKPSLVILSSYSLNLEEGLKNFGIK
                     SINLKAERLEDITKNITTLGQITKKEKEAELLKQEFNQKFKKLSDKPLNKSAIYLYSS
                     NPLMAFNDNSLIADILRLIGIKNLSPQSQISRPVISAEYILKQNPDILILGINAKNNL
                     LDTNALLKNTKAVKTGSIYFNKDTPILLRLSPKIIDRIQEFKTKLENNNF"
     gene            complement(9751..10527)
                     /locus_tag="RJ239_001312"
     CDS             complement(9751..10527)
                     /locus_tag="RJ239_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7331423.1"
                     /translation="MLKIHDLSFAYHQKDLLKNIHLELKNQAFIGILGPNGSGKSTLL
                     KLILKNLSPNKGVISLFNTNIKDFSLKEFAKICGFVPQKSELNTPLKVIDVLLMSKYA
                     NLKHAFSSYSKEDILEIQEFAKDLRLENFLERSILSLSGGEFQRMLLARALLKKPKIL
                     FLDEPTSALDLNYAIELLSLCEKLVKEKNIAIVAILHDLNLASMFCDKILFLKEGEIK
                     YFGTIKELFTQEILKEIYDLNCEIIYKNSKPYILALKEKK"
     gene            complement(10527..11513)
                     /locus_tag="RJ239_001313"
     CDS             complement(10527..11513)
                     /locus_tag="RJ239_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDV7331424.1"
                     /translation="MLNLNTHSKILVIIGLLVAYIIASFTALCLGDENLNPKELFSYI
                     FSQDEILRQIIIDGRLPRIIMAILIGMLLASSGAITQNVFSNPIADPYIIGIASAATF
                     GAVLAYLLKLNDYYYGILGFVCSAFFALGVFKISSKASIATLLIIGIAASSFLGAFTS
                     FFTYLIGEDSFKIVAWLMGNIGNASWFRVGILILPLIFCLFYFYAHKNELNILLSGDD
                     EARNLGVNAQKLKINLLIVSSLAVSFAVAFSGLIGFVGLIIPHTIRLLLKNYDNALVI
                     PLCTAFGGLFLLICDTLARTLLAPVQIPIGILTAFFGAPIFLYLALSARRFL"
     gene            complement(11488..13608)
                     /locus_tag="RJ239_001314"
     CDS             complement(11488..13608)
                     /locus_tag="RJ239_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDV7331425.1"
                     /translation="MHPNKKAFKLSLFALLLITNLNAQESNKAINLQKVVVSTTGFEQ
                     DADSNLRNVISIEGKDLQNKGYVSLEQALERISGISFVNFGLGRNIDMRGQGDKSNIA
                     VKVMIDGRAINVLDNSHGVTPLDSINLDNVERIEIIPGGGSVLYGSGTRGGVINIITK
                     KQKSDAFAINLKSSAYDHGGLGGNLGINGAKQINENLAFSFDIQSFNLDGYQEGYNEK
                     GYFINTKTYININDNSDLTLGYNYFKSKNTSSGYLTKAQAQSDPTQKGNSDNITQINR
                     PEISLDYHYYFDDIWEFNLEAFWQNQKINYLKDVSTMSYGSMSLPVYQNGSGFEDTLT
                     GISLKNKLNYANNSYFIFGYEFANHDAKRTSIIHYDVNAGRFQMSHTMTTLMDMDKQS
                     HSIFALDSHEFNDIFSISGGARYEYSLYDTNRNYTSNMIIPGRPNIKTELFSTDDTSH
                     NFAFEITPNFKYSDTGKLYIKYERGFVSPSPAQFVNKDKNLQKYYSANLNPEIFDTFE
                     LGIDDFWWDFYGFNLTLFYTLSKDEISYLGNPHSTSGSWWKYYNIDQTRRLGVELSLS
                     QNFLDDDLIFRESLTYLDAKISKGVNDGMRIPYVSKIKATAGFEYAWNKNFSNFIDLT
                     YFSRAKDGGTIDENTGKMSKNSWIRDYFLTDIGMKYNYKKLQILAGIRNLFDKRYYTY
                     QDSINDQYLVGNGRNYYVEFKYAF"
BASE COUNT         4576 a         2045 c         2194 g         4827 t
ORIGIN      
        1 taaaataaaa gagatgtaat cttaaattta aggaagaata atgaatactc ctaaatggac
       61 tagtcacgat acaaggtggg ttttatctct ttttggaaca gctattggag ccggcgtact
      121 tttgttgcct attagtgctg ggcttggtgg attgatacct ttgttagtta tacttgtttt
      181 agcttttcct atgacttact tagctcatag aaatttatgt cgctttgtgc tttcaagttc
      241 taatccaaaa gatgatatta cttttgttgc agaaagttat tttggcaagg gcggtggatt
      301 tttaattaca cttttgtatt tttttgctat tttgcctatt ttattggttt atagtgctaa
      361 tcttacaaca actttgcttg agttcttaat caatcagttc aatttcaatg cagatcttac
      421 tcatgctgct cgttggtggg tgagtttttt gattgttgga gttttggttt tgatttctat
      481 tcttggtgaa aatgttgtaa caaaagcaat gagttttctt gtttttcctt ttattatatt
      541 tttatttatt ttttcattgc ttttaattcc acaatggaat ttatcgttat ttgcaaatgt
      601 tgatttttcc gtaatttcaa caagtaattt ttgggttact ttatggcttg ttattcctgt
      661 gatggtattt agttttaatc actctcctat catttcttca cttgcttgtt attgtaaaaa
      721 agaatatggt ggttatgctg aacctcgcgc tagaaaaatt atttctttgg caattattct
      781 tatggttttt gttgtaatgt tttttgtttt ttcttgtgct ttaaccttta caccagaaga
      841 ttttgcatca gcaaaagatc aaaatatcaa tattcttact tttatagcaa ataaatttcc
      901 tgaagtttct ttactagctt atgttggacc tattgttgca cttgtggcta ttagcaaaag
      961 tttcttaggg cattatcttg gttctcaaga aggcttaaat ggtattttat ataaagcaag
     1021 taatggtaga attcaaggta aattcgctca aactttaaca gcgatcatta cctttgctat
     1081 cgcgtggctt gttgcgtata aaaatccaag tgttatagga attatcgagg ctattggtgg
     1141 tcctgttttg gctattttgc ttttcttaat gccgctttat tgtatttatc gttttgatat
     1201 tttggcaagg tttcgtaata aatttttaga tctttttgtt ttggtaatgg ggatagttgc
     1261 aatttctgct gcaattcatg atcttttata aattaaggat aaaaaatgag taatttaagc
     1321 atttttaaaa taggtgttgg cccttcttct tctcatactt tagggcctat gcttgctgga
     1381 aatttatttt gtaaaaaagt tgctaaaaag cttgatgaaa ttgatagagt tggggttact
     1441 ctttatggtt ctttgtcgtt aacaggcaaa ggacacttga gtgataaggc tgtgatttgg
     1501 gggttaaatg gcttagaagc taaaaattta agtgcggcaa tacaagatga agtaaataaa
     1561 aatgctattg aaaatgctca aattgatttt tgtggcgaga aaaaacttag ttttaattat
     1621 gaaaaagatt tgatattttc taaagatttt ttacctttac atgagaatgg tatgaaaatt
     1681 aaagcttatg attgtaaagg tgggttagtt gatgaggaaa cttattattc tgtaggtgga
     1741 ggctttgttt taacagctgc ggaattagaa aaaaaaggta aaaattctaa ccaaaataaa
     1801 aagaaaaaac tagatataga gcttaataac gctaaagaag ctttagagct ttgcgataaa
     1861 agagattggg atttggcaga gctttcttat cgttatgaat tgcaatttca cactaaagag
     1921 gaaatttgtg cttattgtct tgaaatttgg gaagtgatgc aagaagtgta ttataatggt
     1981 acgcacccga atgaagatta tttgcctgga aaacttcatt taaagcgtag agctaaagga
     2041 cttaaagaaa gagtagcgat gacagctgat cctatgggta ttatcgattt tatttcttta
     2101 tatgctattg cgattgctga agaaaatgct agcggagcaa aagtcgtaac cgcaccaaca
     2161 aatggagcat gtgctgttat ccctgctgtt atgctttatc ttaaaaatca tactataggt
     2221 tttagtgatg aaaaggttat agagttttta ttaacagcaa tgcttatagg ttctttttat
     2281 aagaaaaatg caagtattag cggagcagaa gcaggttgtc aagcagaaat tggtagtgct
     2341 agttctatgg cagctgcggc tatggcaaca gttttaggag ctaatgcttt taaagcatgt
     2401 aatgctgctg aaatggcaat ggaacatcat ctaggtctaa cttgcgatcc agttgcagga
     2461 cttgtgcaaa ttccttgcat agaaagaaat gcctttggag ccattaaggc cataagtgct
     2521 gctagaatgg caatgacacg caaatccact cctatggtaa gccttgatga ggttatagaa
     2581 accatgtatg aaacaggaaa agatatgaat tataaatata aagaaacttc tttaggtggt
     2641 cttgctacaa atttaaaaac agtatgctaa agtgttttta cactttagtg tattttttca
     2701 ttctttgact taaaaattct ttcatttctt ctttggaaaa acttttaaga atgcgaattt
     2761 gcttaaaaag caagccaaga ttgattactc ccatcactaa aagcaataag caaatcgtta
     2821 aaaaaagaag atctatggct ccaaattcat taatcatagc caaacttgca aaaaatacac
     2881 tcgctaataa caaaaaaaat aaaagcaata tttgttttaa ttttgtctca ttaaaattat
     2941 cgcaattttg agtgaaattt ctaaaaagta tgatcttttt acccaaattt gaaactaaaa
     3001 tttcatcatt ttccttaaat aagccttctt ttaaactttg ataaaaaaag atttcattgt
     3061 ttaaatttaa atcatctttg tagcttgata gggtgtagtc cttgtaaaaa aaggatttta
     3121 attcattttt cttttctatt ttaaataatc ttaaatcatt tctcgcataa aaaaatccac
     3181 taaagttcat aaatgccata agtatcactc cctaaaaaat tcctgtaaag tggcttgaaa
     3241 tttaaaggta ttgtaacatt tttttcatca tttaaacttg aactttggaa aatcaaaaac
     3301 atatctattt catctttaaa gattttgaga aaattttctc caccctcata cattaaaaat
     3361 ttagcttcac ttggaatttg ggtataaatt tggcggtttg gaactttaaa taaagggata
     3421 tttttatcaa aattatctat attttgacgg cttaagatac aaagattagg cgcttttgct
     3481 ttgcaaagcc tagcatctaa tatagggcaa tcttttctta tggtttctcc accgactaca
     3541 agcaaatcaa tcaccgctct aatttcatgt gcataagtgc gacttagctc attgcttacg
     3601 attttgccaa aaggtgagcc gttcatagaa agggctaatt taaaaagttt aaattgccct
     3661 ttttgccatt ttaaaaaagg ttttaaaagt ttttttcctt cttctttaag tatgtcaaat
     3721 tcaacctcta taccttgttt ttttaaaaat tcagccccac cgcttgcgat tttattttca
     3781 tctttaacgc tgatgaaaat ttttttaaaa cctagctcgc taaagagttt tgcacaagga
     3841 ggtgtttttc cttgatgaga gcaaggctca agcgttacaa aagctatgct atctttaaat
     3901 acaccttgat ggtttttgca aataaactca tgtaaggcgt ttgcttcttt gggcaatgaa
     3961 atttcaggtc ttaagctttt aaaagcatga gctatggcat taagttccgc atgagctaat
     4021 ccagcttttt catgagcttt tatggctaaa attttttcat ttttatctaa gattacacag
     4081 cctacagccg gatttggata ggttaaaaac tgatatttcc aagcctcatt taaagctaaa
     4141 ttcatataaa attctttcat ttgcctacct tgtattttaa aatttgacat atttttaaaa
     4201 ttttatattt ttgttttaag ataacaaatt ctaaatttcc atttgtattt cttattttta
     4261 attatattag ccatagtttt tctaagtttt tttaggatat aacaaaaata gtaagaccga
     4321 agtattattt ttcatttgta gtatccttta taatttcagg aataatataa gcttgataaa
     4381 ctagaaagtc ttggtggccg ggagaaaggg attcgaaccc ctggaggtgt gaccctcaac
     4441 ggttttcaag accgccgctt tcgaccactc agccatctcc cgataaagta aagttttgcc
     4501 ttttggaggc gacatccgga ttcgaaccgg agatcaaggc tttgcaggcc catgccttac
     4561 cgcttggcta tgtcgccctg ataatgttga aaaagtggtg cccgaggccg gacttgaacc
     4621 ggcacggaag aaaaattccg agggatttta agtcccttgt gtctaccaat tccaccaccc
     4681 gggcgggtga ttatggagcg ggaaacgaga ttcgaactcg cgaccccaac cttggcaagg
     4741 ttgtgctcta cccctgagct attcccgcat aaatttctga aagaattgaa gataaaagta
     4801 tagcaaaata aacttaaaag gagtttattt tgctataagt tatttgcaaa taaataaagc
     4861 ttttgcattt aaaatttgtt cttttttgct gataattgga gatgaaagtt ctatattgtc
     4921 agatttcgca tttagcattc taggtgcgat attggtattg gcatttactt gtaaattttt
     4981 caatacacaa gttttattaa gatctaaaga gtaagttttt tcatattcgt atgatgtttt
     5041 taaaagctct ttgtagagat tttctttgtt gttgtttagt gtatcttttg aaaattttgt
     5101 ttgtatggct ggtgttgaaa cgctgatgaa attattttta gctatgatag aattgatgtc
     5161 atttaaaagc ttgttaaaat ctgcaagttg gttttcttta aattcacatt ctaaattcgc
     5221 atcaaatctt tgaccttttg gagtttgtat accatcttta taggaaaaat taggttctaa
     5281 agaaaaactt gctccgctac aaaaattttc tttttttgag cgttctaaaa tttgattgaa
     5341 agtatttgtg atttcagctt tttcactatt gtctaatgta atttttgaac ttaaattttc
     5401 atttgcccaa aaattaatat ttgcatataa aatatcgggt tttagcgtat tgcttacttc
     5461 tatatttctt gaaaaatata aatcatgatt agagtctttt ttgcctaaaa attctacatt
     5521 aaaaactact cctgcaacaa aaagtaataa acataaaaaa cctacaccta aacctttaaa
     5581 aaaagctaac atggatatcc ttaataattt aatttgagct aattttagca aaaaatttta
     5641 aaattttttt gttatactct catttatgca aaaaaaagag cttgaaaaac tacaagaaaa
     5701 tttacttctt tggtatgaaa aaaatggacg caaaactttg ccttggcgta atttacaaag
     5761 tcaaaattgt gatgaaagtt taaagcatat tgatagagct tatggggttt atatcagcga
     5821 aattatgctt cagcaaactc aagttaaatc agttttagaa aggttttatt tccccttttt
     5881 gcaaaaattt cctactttag aaagtttggc taatgctaat gaagacgagc ttttaaaggc
     5941 ttggcaagga cttggttatt acactcgtgc tagaaattta aaaaaggcag ccttagaatg
     6001 cgtggataag tttggggcta aattacccaa agatgttgag gatctaaaaa aattaagtgg
     6061 tataggagct tatacagcag gcgctatagc ttgttttggc tacgatcaaa aggtttcttt
     6121 tgttgatggc aatatacgcc gtgtgctttc tcgtcttttt gctttggaaa atcctagcat
     6181 gaaagaactt gaaaaaagag ctaaagagct tttaaattta aatcatgcct ttgatcacaa
     6241 ccaagctttg cttgatatag gggctttggt ttgtgtgggt aaaaatgcaa agtgtaggat
     6301 ttgtcctttg tatgattttt gtcaaggcaa atttcataca gagctttatc caagagctaa
     6361 aaaaatactt tatgagagtt taaatttaaa tctttttttg tttgaattta ataaaaaatt
     6421 tgcgatacag aaaagccaag ataagcttta taagggtatg tataattttc ctttttttaa
     6481 agaaggagag tataaacttt ctaaagatat gggttttgta ggggagttta agcacagcta
     6541 tactaagtat aaacttaata tcaaggttta tcatcaaatt ttaaacaatg aaaataaaaa
     6601 ttatgaattt aaaaccttaa aagagttaga aagtaccgca ctttcggcac tttctttaaa
     6661 agcgttaaaa ttaattaagc tctgattttt taggcaaaca taaagtagct ataagcatga
     6721 tgattgtaaa aatagctata tatataaaaa agccattttc tatacctgca tttttaaatt
     6781 gtaaagcaac ccaaggagca gatcctccaa aaacagcatt tgaaatagca taacctaaac
     6841 ctgtccctaa agctcttaca tgttcaggaa aaagttttgc tttaaaaatc ccagcaactg
     6901 aagtataaaa acttaaaata acaaacaata ataccaccaa cataaatgtc aaagaagggt
     6961 tattttgtgc gttattggct ataagtgaaa aaataggata aattcctacc aatgccaaaa
     7021 tacaaaatac aattaaagat cgtttgtgac ctattttatc tcctatatat ccaaaaagag
     7081 gttgaatgat cattagtata aataaagcac ctaagaaaag attattaaca agcattttat
     7141 ccatacccgt attttccata aaagttttag tataagttgt aatggtgtaa aaagctaaag
     7201 aacctccaga ggtaacccca agtaccatta aaaaaggttt ccaagatttg cataatgcct
     7261 ttaaagtacc acgatcttca tgctggtgaa gttttgtagc actttcattc atcatttttc
     7321 ttacaaaaag cgagcctagt gctaaaattc cgcctattac aaaaagtatt ctccaagcat
     7381 aatctttcat atcatcaatg ctaaaaaata aaaacattat actaatgctt gcaacggcca
     7441 aaagttgacc acctattagg gttacatact gaaaagatga gtaaaaaccg cgttttcctt
     7501 ccgtagcaag ttctgaaaga taagtagctg ctatgccata ctccccgcct acactaagac
     7561 cttgaataag tcttgctatt aaaagcaaga taatagcaag atcgcccact gtatctttgc
     7621 ttggtaaggc tgctatcata aaagagccta aagccattaa aaccactgat ataaccatag
     7681 attttacgac ctactttatc agctaaagag ccaaaaagcc aagagcctat aggacgcata
     7741 aaaaatcctg ctgcaaaaac cccaaaggca ttgatttgct ggataacagg attatctgaa
     7801 gttgaaaaag tatgagcaaa ataagttgct gtaaaagcat agatataaaa atcaaaccac
     7861 tctactaaat ttccgctact tgcagcaata atagagcgaa tttttttcgt gcgagtaagc
     7921 tcttgcataa acccttcctt aattttagat ttttatttaa gtatagtgtg atttttgttt
     7981 aatatattta aaaataaaga agagaaataa aaaagataaa aatatcgata aaaatgttac
     8041 atattttaat aaatttcata aattttggta aaatgtttac tctaggaaat ataatgaaat
     8101 ttaaaaaaat atatatagaa ttaagcgata tttgtggttt aaaatgtgat ttttgtcctt
     8161 ctcaaaaagg aattcgcggg gtaatgagtg aagaaaaatt tcaaaactta gcttatgaaa
     8221 tttctaataa agctgagctt tttacctttc atcttttggg cgatcctttg cttttaccta
     8281 atttggaaaa ttatctaaaa atcgcaaaag atgaagctat gaaacttgaa atcactacaa
     8341 gtggctttta tctaaattct aaaaatcaag ctttattgtt agggtatgag aatatccatc
     8401 aaatcaatat ttctttaatg tcttttttaa gtcaaagcaa aatttcttta gaacagtatt
     8461 ttaagcctat tttagaactt tgcaaaaagc atttagagca aaaaagcctt tcttttatca
     8521 atctaagact ttggaattta gatgctaatt ttaaagcacc taagtcaaat ttaaaaattt
     8581 atgagttttt agccaaagaa tttgaagcta agatcgatgc aaacttaagt aaaaatcgct
     8641 tgcaaagaca tattttgctt catcaaaata aactttttaa atggccaaat ttaaaagatg
     8701 aaccccttta taaaaaagga aaatgtcatg ctttaaaaga gcaaattggg attttaagtg
     8761 atggaagttt ggtgccttgc tgtttggata ctaaagcaga tattaacttg ggaaatgttt
     8821 ttgaaaataa ctttgataag ctttttaaat caccgcgtat aaagatgatg aaaaaagctt
     8881 ttgaagaaga taaacgcata gaaaaacttt gtcaaacttg cgaatttttt aaagcaagat
     8941 tgggtgatta aaaattgtta ttttctagct ttgttttaaa ttcttgaatt ctatctatta
     9001 tcttaggact aagacgtaat aatataggtg tatctttgtt aaaataaata cttcctgttt
     9061 taactgcttt ggtatttttc aataaagcat ttgtatctaa aagattgttt ttagcattaa
     9121 ttccaagaat gagtatgtct ggattttgtt tcagtatgta ttctgctgat ataacaggtc
     9181 ttgaaatttg actttgcggg cttaaatttt taatccctat aagtcttaaa atatcagcta
     9241 ttaaagaatt atcattaaag gccattaaag ggttgctaga ataaagataa atcgcacttt
     9301 tatttagggg tttatcgctt aattttttaa atttttggtt aaattcttgt tttaaaagct
     9361 ctgcttcttt ttcttttttg gtgatttggc ctaaggttgt gatatttttt gttatatctt
     9421 ctaaacgctc ggcttttaaa ttgatacttt tgataccaaa atttttaagt ccttcttcta
     9481 aatttaaaga ataagagctt aaaatcacca aacttggttt taatgctact attttttcaa
     9541 gcgaaggatt tgaaaaagta cctacgcttg taagttttga ggtttgatct ttaggataaa
     9601 tatttgagtg ttgcaaagtg gcaatgccta cgatttgatc cttagcctta agcataaaaa
     9661 gggtttctat gcttgcagga tcaagcacta caaggcgttc ttttgcattt agtgtgatta
     9721 aaaacaaact tataataatt aaaatttttt tcattttttc tcctttaaag ctaaaatata
     9781 aggtttagaa tttttataaa taatctcgca gtttaaatca taaatttctt ttaaaatttc
     9841 ttgagtaaaa agctctttga ttgttccaaa atactttatt tccccttctt ttaaaaaaag
     9901 gattttatca caaaacatag aagctaaatt taaatcatgt aagatagcaa caatggcaat
     9961 atttttttct ttaactagtt tttcgcaaag acttaaaagc tctatagcat agtttaaatc
    10021 aagggctgaa gtgggttcat ctaaaaaaag aatttttggc tttttaagca aagctcttgc
    10081 taaaagcatt ctttgaaatt cacccccact taaagaaagt atgcttcttt ctagaaaatt
    10141 ttcaagtctt aaatccttag caaattcttg aatttctaaa atatcttctt tagaataaga
    10201 actaaaagcg tgttttaaat tcgcatattt gctcattaaa agcacatcga tgacttttaa
    10261 aggggtgttt aattctgatt tttgaggcac aaatccgcaa attttggcaa attctttaag
    10321 agaaaaatcc ttgatatttg tgttaaaaag acttatcact cctttatttg gacttaaatt
    10381 tttaagtata agttttaaaa gagtgctttt gcctgagcca tttggcccta aaattcctat
    10441 aaaagcttgg tttttaagtt ctaaatgaat attttttagt aaatcttttt ggtgataagc
    10501 aaagcttaaa tcatgtattt ttagcattat aaaaatctcc tagcgcttaa agccaagtat
    10561 aaaaaaatag gagctccaaa aaatgcagtt aaaattccaa tcggaatttg cacaggagct
    10621 aaaagagttc ttgctaaagt atcacaaata agtaaaaata atcctccaaa tgctgtacat
    10681 aaagggataa ccaaggcatt atcatagttt ttaagcaaaa gtcttatagt atgaggaatg
    10741 atgagtccaa caaagcctat aagtccacta aaagcaaccg caaaagatac agctaaggat
    10801 gagacaatga gtaaatttat ctttaatttt tgagcattta cccctagatt tctagcttca
    10861 tcatctccgc ttaaaagtat gtttaattcg tttttatgag cgtaaaaata aaacaaacaa
    10921 aaaattaaag gcaagattaa aatacccaca cgaaaccaag aagcattgcc tatatttccc
    10981 atgagccaag cgactatttt aaaagaatcc tcgcctataa gataagtgaa aaaagaagta
    11041 aaagctccta aaaaagatga agctgctatg ccgataatga gtaaagtcgc tatagaagct
    11101 ttagaagaaa ttttaaaaac tcctagggca aaaaaggcag agcaaacaaa acctaaaatt
    11161 ccataataat aatcattcaa ttttaacaaa tacgctaaaa ccgctccaaa ggttgccgca
    11221 gaagctatac ctatgatata aggatcggct ataggatttg aaaatacatt ttgagtgata
    11281 gccccactac tagctagaag cataccgatt aaaatcgcca ttataatgcg tggcaagcgt
    11341 ccatctatga tgatttgtct taaaatttca tcttggctaa agatatatga aaaaagttct
    11401 tttgggttta aattctcatc tcctaaacaa agtgctgtaa aagaagcgat tatataagct
    11461 accaaaagcc ctataatcac taaaatttta gaatgcgtat ttaaattcaa catagtagtt
    11521 tctgccattc ccaactaggt attgatcatt tatactgtct tgataggtgt agtatctttt
    11581 atcgaaaaga ttgcgaattc ctgctaaaat ttgtaatttt ttataattat atttcatacc
    11641 aatatctgtt aaaaaataat cccttatcca agaattttta gacatttttc ctgtattttc
    11701 atctatagtt ccaccatctt ttgctctaga aaaataggtt aaatcaataa aatttgagaa
    11761 atttttattc caagcgtatt cgaacccagc tgtggctttg atttttgaaa cataaggaat
    11821 tctcatgccg tcattaacgc ctttagaaat tttagcatca agataagtta gactttctct
    11881 aaagattaaa tcatcatcta agaaattttg actcagactt aattctactc ctagacggcg
    11941 agtttgatct atattataat atttccacca agatccacta gtagaatgag ggtttccaag
    12001 ataagaaatt tcatctttgc ttagggtgta aaataaagtt agattaaagc cgtaaaaatc
    12061 ccaccaaaaa tcatcaattc ctagttcaaa ggtatcaaag atctcaggat ttaaatttgc
    12121 agaataatac ttttgtaaat ttttatcctt attgacaaat tgtgctggac ttggagagac
    12181 aaaacctctt tcgtatttga tataaagctt tcctgtgtct gagtatttaa aatttggagt
    12241 gatttcaaag gcgaagttat gacttgtatc atcggtcgaa aaaagttcag ttttaatatt
    12301 aggtcttcca ggtattatca tattgctagt gtaatttcta tttgtgtcat aaagactata
    12361 ttcatatctt gctccacctg aaatactaaa aatatcgtta aattcatgag aatcaagagc
    12421 gaaaatagaa tggctttgtt tatccatatc cataagcgtt gtcatggtgt gactcatttg
    12481 aaatctgccg gcatttacat cataatgaat aatgcttgtt ctttttgcat catggtttgc
    12541 aaattcataa ccaaaaataa aataagaatt atttgcataa tttagcttgt tttttaaact
    12601 tatccctgta agtgtgtctt caaaaccact tccattttga tatacaggaa gactcatact
    12661 tccataactc attgtagaaa catcttttag ataattgatc ttttgatttt gccaaaaagc
    12721 ttctaggtta aattcccata tatcatcaaa atagtaatga taatccaaag aaatttcagg
    12781 gcgattgatt tgtgtgatat tgtcactatt gcctttttgg gttggatcgc tttgagcttg
    12841 tgcttttgtt agatagccac tgctggtatt tttgctttta aaataattat aacccaaagt
    12901 taaatcgcta ttatcattga tattaatata ggtttttgtg ttgataaaat aacctttttc
    12961 attataacct tcttgatatc catcaaggtt aaaactttgt atatcaaagc taaaagctaa
    13021 attttcattt atttgtttgg cgccattgat acctaaattt ccacctagtc caccatgatc
    13081 ataggcactg ctttttaaat ttatagcaaa agcatctgat ttttgttttt ttgtaatgat
    13141 attaatcacg ccccctctag taccacttcc ataaagcaca gatccacccc caggtatgat
    13201 ttctatgcgt tctacattat ctaaattgat actatctagc ggggttacac catgggaatt
    13261 atcaagaaca ttaatagcac gcccatcgat cataactttt acagctatat tggacttatc
    13321 tccttgtcca cgcatgtcta tattgcgtcc aagtccaaaa tttacaaaac taatgcctga
    13381 aattctttct aaggcttgtt ctaaggaaac ataaccttta ttttgtagat ctttgccttc
    13441 tatgctgatt acattgcgta aatttgaatc cgcatcttgt tcaaaacctg ttgtactaac
    13501 aacaactttt tgtagattga tagctttatt tgattcttgt gcatttaaat tagttattag
    13561 caataatgca aataaagata atttaaaagc ttttttattt gggtgcaaat tttactcctt
    13621 aaataaaata aataatgata at
//
LOCUS       DAPIVO010000048        13033 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.048, whole genome shotgun sequence.
ACCESSION   DAPIVO010000048 DAPIVO010000000
VERSION     DAPIVO010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13033)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13033)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13033
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.048"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            69..968
                     /gene="hisG"
                     /locus_tag="RJ239_001315"
     CDS             69..968
                     /gene="hisG"
                     /locus_tag="RJ239_001315"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HDV7331426.1"
                     /translation="MQENTRLRIAIQKSGRLSKESIELLSECGVKMHIHEQSLIAFST
                     NLPIDILRVRDDDIPGLIFDGVVDLGIIGENVLEENELERQSLGENPSYKLLKKLDFG
                     YCRLSLALPQENKFQNLKDFEGLRIATSYPQLLKRFMKENGINYKNCTLTGSVEVAPR
                     ANLADAICDLVSSGATLQANNLKEVKVIYESRACLIQKENALSKEKQALVDKIMLRVA
                     GVMQARESKYIMLHAPKEKLDKIQALLPGVERPTILPLAHDEKNVALHMVSKENLFWE
                     TMEALKEEGASSILVLPIEKMLK"
     gene            976..2262
                     /gene="hisD"
                     /locus_tag="RJ239_001316"
     CDS             976..2262
                     /gene="hisD"
                     /locus_tag="RJ239_001316"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HDV7331427.1"
                     /translation="MQILVYDNLDEKQKEEALKRPAISAKDEISKIVSSIIKEVQEKG
                     DKALIEQALKFDKAEISKIKITQEEITQASNRLDKDLQEAILVAYENIKKFHEAQIPH
                     EIALETTKGVKCEVLTRPIEKVGLYIPGGLAPLFSTVLMLAIPAKIAGCEKIVLASPA
                     KINDAVLFCAKLCGVDEIYQMGGAGAIAALTYGTQSVLKVDKIFGPGNAFVTEAKRQV
                     SSDINGAAIDMQAGPSEVLVIADDLANEKFVASDLLSQAEHGADSQVILVCLSQDFAK
                     KASDEVQSQLELLPRKELASKSIANSRIIIAKDLNQALEISNLYAPEHLIIQTQNPRE
                     LLKGVKHAGSVFLGAYSPESMGDYASGTNHVLPTYGLTKTHSSLGLADFSKRMTVQEL
                     SKEGFLALGKSVEILAQNEHLDAHKNAVTFRLESLK"
     gene            2259..3317
                     /gene="hisB"
                     /locus_tag="RJ239_001317"
     CDS             2259..3317
                     /gene="hisB"
                     /locus_tag="RJ239_001317"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HDV7331428.1"
                     /translation="MSQKILFIDRDGTLIEEPKSDFQIDTLEKLRFEKDAIPTLLKLK
                     KFGFKFVMVSNQDGLGTPSFPKENFEIAHEKMLDILKSCGIEFQDIFICPHFENENCA
                     CRKPKTAMLEEYIKHELYDKEQSFVIGDRESDMILASNLGVRGLKYGELSWKEIENEI
                     LSSFRSASYQRTTKETDIKVKVCLNGGKVSIKTGIDFFDHMLEQIAVHGGIGLEISCK
                     GDLEIDEHHSVEDVALALGACIKKALGDKIGIARYGFALPMDECLASCAMDFCNRPHL
                     VYKAKFKKSHLGALSTEMIEHFFYSLSYAMGVSLHLKVKGKNDHHKAEGLFKAFAKAL
                     KMAVKIESENLASSKGVI"
     gene            3314..3901
                     /gene="hisH"
                     /locus_tag="RJ239_001318"
     CDS             3314..3901
                     /gene="hisH"
                     /locus_tag="RJ239_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDV7331429.1"
                     /translation="MKIIIIDTACANLASLKFCLDRLGFNATISRDLKELESADKLFL
                     PGVGTAKEAMKNLEQFNLIDFIQNTKKPLLGICLGMQILGNFSEELNQETLKLIDFTT
                     QKFKAKEGFTFPHMGWNEVYSSHALFKGLEGAYFYFVHSYCVGLGKYTIADCEYSQKF
                     SASVMKDNFYGVQFHPERSSEAGEILISNFIKDIG"
     gene            3898..4629
                     /gene="hisA"
                     /locus_tag="RJ239_001319"
     CDS             3898..4629
                     /gene="hisA"
                     /locus_tag="RJ239_001319"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HDV7331430.1"
                     /translation="MTQIIPALDLIDGEVVRLVKGDYEQKKVYKYNPLKKFKEYEKAG
                     AKELHLVDLTGAKDPSKRQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVV
                     IGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFY
                     SNKGLKHILCTDISKDGTMQGVNVRLYKLIHEIFPNICIQASGGVASLKDLENLKGIC
                     SGVIVGKALLDGVFSVEEGIRCLAN"
     gene            4614..5570
                     /locus_tag="RJ239_001320"
     CDS             4614..5570
                     /locus_tag="RJ239_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COG2958 family protein"
                     /protein_id="HDV7331431.1"
                     /translation="MSSKLSYKELTLEILKQSDRPLSVNEIWQKALEQGLDKKLSSIG
                     QTPIATLGARIYVDIKELQHNSLFIKASQKPTTFWLKERENELLKLDNKNEITNEKQE
                     KNKFHERDLHPLLVKFLYENLDFNLNCKTIYHEQSKKGKGGEDKWNYPDIVGVYFPYD
                     DYEKETITLLENIKQNSYKLFSFELKIALNFSNLKECYFQAVSNSSWANEGYLVVLQE
                     IDSEVLSELRRLNQSFGIGVIKLEKDISNSQILISAKEKELDIQTLNMLINKNPNFKE
                     FIDDINKQIKVGKEAKIQANFDEIKSDEEMEKYLKEKCILEK"
     gene            5571..6338
                     /gene="hisF"
                     /locus_tag="RJ239_001321"
     CDS             5571..6338
                     /gene="hisF"
                     /locus_tag="RJ239_001321"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDV7331432.1"
                     /translation="MLTKRIIACLDVKDGRVVKGTQFKNHKDMGDIIELARYYSQNGI
                     DELVFYDIAASARKERISREWVSEVAKNINISFCVAGGIKSEEDAAELLANGADKISI
                     NSPALNDPSLITRLAKSFGVQCVVVGIDSFKDENGNLKVFQYTGDEKTSKHSGKSTLE
                     WVKKVQDLGAGEIVLNMMNQDGVKNGYDLEQLEAVYKICKVPLIASGGAGKMEHFLEA
                     FKLGIDGALAASVFHQKLIDIKELKIYLKNQGLSIRI"
     gene            6340..6963
                     /locus_tag="RJ239_001322"
     CDS             6340..6963
                     /locus_tag="RJ239_001322"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HDV7331433.1"
                     /translation="MQNFKELNEKIAWQKVDNLLPVIIQDAKTCEVLMLGFMNNEALE
                     KSLESGKVVFFSRTKQRLWMKGEESGNFLNIIDLSLDCDNDTLLILANPVGPTCHTGD
                     ISCFEKISKNADFVFLARLEKLINARKNADENTSYTAKLFKSGTKRIAQKVGEEGVET
                     ALAATVKDKEELICEAADLMYHLSVLLADANLSFSDVISKLKERHKA"
     gene            complement(6988..8148)
                     /locus_tag="RJ239_001323"
     CDS             complement(6988..8148)
                     /locus_tag="RJ239_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-carboxylate
                     N-succinyltransferase"
                     /protein_id="HDV7331434.1"
                     /translation="MINTKEDFLLLIKQIEQKSGYKKPKAFGIARLDRGQLNKNKILQ
                     ASFALINYEQNFGSAAIMLEAFMQRGVEIDFNASEFVQTLKLEDIDFALSCFKPFLEE
                     DGHQNIDLLKIIKDKFKDDEFSFVCLFEDKEPLSVESIYLKLYLLSTKKVPLRSINLN
                     GAFGLLSNVAWSDDKPIELEYLRANEMRLKMSNQYPKIDFVDKFPRFLAHIIPEDNTR
                     ILESSKVRMGASLAAGTTIMPGASYVNFNAGTTGACMVEGRISSSAIVGEGSDVGGGA
                     SILGVLSGTSGNAISVGKACLLGANSVTGIPLGDNCIVDAGIAVLEGTKFLLKDAEEL
                     AKLNPYFNFDKEIYKGLELKGLNGLHFRQDSISGAMIVALNKKAVKLNEALH"
     gene            complement(8174..9280)
                     /locus_tag="RJ239_001324"
     CDS             complement(8174..9280)
                     /locus_tag="RJ239_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HDV7331435.1"
                     /translation="MKEQILEKLKTVKYPGFEKDIVSFNFVKDIKIQDDGVFIDIEIV
                     SANPEVANEIRKNTIEALSSLALKNIELNIITPKIPEEKSNSRSGKNIAPQVKNFIMV
                     SSGKGGVGKSTTTVNLAISMAKMGKRVGILDADIYGPNIPRMLGETKTQPEVVGQRLK
                     PILTHGVYMMSMGVLIEEGQGLMWRGAMIMKAIEQLLADVIWPELDVLFLDMPPGTGD
                     AQITSAQSIPIAAGVCVSTPQTVSLDDSKRALDMFNKLHIPIAGVIENMSGFLCPDNG
                     KEYDIFGKGTAEDMAKAYKSEVLAQIPIEMIVREGGDEGKPVSFYHPESVSSKRYLMA
                     AEKIWSFIEKINNEGGADNSAIQPVMNGKSACSH"
     gene            9403..10518
                     /locus_tag="RJ239_001325"
     CDS             9403..10518
                     /locus_tag="RJ239_001325"
                     /EC_number="2.7.7.60"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase/2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase"
                     /protein_id="HDV7331436.1"
                     /translation="MSEMSLIMLAAGNSTRFNTKVKKQFLRLGNDPLWLYATKNLSSF
                     YPFKKIVVTSSNITYMKKFTKNYEFIEGGDTRAESLKKALELIDSEFVMVSDVARVLV
                     SKNLFDRLIENLDKADCITPALKVADTTLFDNEALQREKIKLIQTPQISKTKLLKKAL
                     DQNLEFTDDSTAIAAMGGKIWFVEGEENARKLTFKEDLKKLDLPTPSFEIFTGNGFDV
                     HEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTDMK
                     FKNANSMELLKQAYDKVREIGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEF
                     RINVKATTTEKLGFIGRKEGMAVLSSVNLKYFDWTRL"
     gene            10515..11402
                     /locus_tag="RJ239_001326"
     CDS             10515..11402
                     /locus_tag="RJ239_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDV7331437.1"
                     /translation="MKVLIIENEIYLAQSISIKLSDAGYSCEIINSFDEYNGEKYYDI
                     ILLSTNTNNFLKAVGQFKHSIIILLISYISTDTVSNPLKLGASDYIQKPFMIEELIRK
                     IKHYQDFRKLSILNKAYQSYIKSRLETIKIPEYNYKKLKLPLILKSNKQSSADAFVFN
                     YANECDITLSFIDLTSTNSVEKVMKLPTENNLLFLSNFQALKAAEKEKLLDFIQNKNV
                     ILHTNSNTDDLKINCINLNDNEKNINSNEILTIDEYVKYVIINYQNIFPDTDLSKKLG
                     ISRKSLWEKRKKYEISKKK"
     gene            11380..12540
                     /locus_tag="RJ239_001327"
     CDS             11380..12540
                     /locus_tag="RJ239_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HDV7331438.1"
                     /translation="MKSARKNKNIIIDQNEFGILSLIKEGLLGTCTHLMNEKEVNEII
                     KSGKFKGESFPYPLSFAPKNAEEALNDIKSGDRIDLMLDEKVVGHIDFKSQFKNNKNF
                     SDIFSPNTCSLEDMGTTCISGKIEIYNSQIEKIKENFQQIKNNLNAQKITAIVSSFDP
                     LHRAHERMFRWTIDKADLVVIFLVESFDVNGFEFELKEAYLKKFIQNYLPPDRIFIFP
                     LKNINIFHAHLNPGLESIIAKSLGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYG
                     IEVIVLPEFVFCDQCRMIVSTRSCPHGCHHHLHYNSQSLKDLLRAGIIPPAIFIRKEV
                     SSVILTSLFPNRLKNMQKIYNELFPTDGILEYKNDEEFYQKLLEIHQMSYMV"
     gene            12545..>13033
                     /locus_tag="RJ239_001328"
     CDS             12545..>13033
                     /locus_tag="RJ239_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HDV7331439.1"
                     /translation="MQKLFLTFFYSGSVKKASGTFGTIAALIPAFFILKYLGINTLFL
                     LSILIFVASIRVIDDYEKKTGIHDDKHIVIDEVAGVFLACAIAASVENSIVNFILAFV
                     LFRLFDITKPSIIGKIDKKVKGGLGVMLDDMLAGLFAGLLSAVIYGFLLKFNLVFWDI
                     NLK"
BASE COUNT         4714 a         1922 c         2226 g         4171 t
ORIGIN      
        1 aacccttgct aaaaattcaa ctacttatgc taatataagt ttttaatttt taatttcaag
       61 gatatgttat gcaagaaaac actcgtttac gcattgcgat acaaaaatca ggtagacttt
      121 caaaagaatc catagagctt ctttcagaat gtggtgttaa aatgcatatc catgaacaaa
      181 gcttgatcgc tttttctaca aatttaccca tagatatttt acgcgttaga gatgatgata
      241 tccctgggct tatttttgat ggggttgtag atttaggcat tataggggaa aatgttttag
      301 aagaaaatga acttgaacgc cagtctttag gagaaaatcc aagctataag cttttaaaaa
      361 agctagattt tggatattgc cgtctttctc ttgccttacc tcaagaaaat aaatttcaaa
      421 atttgaaaga ttttgaaggc ttaaggatag ctacttctta tccacaactt ttaaagcgtt
      481 ttatgaaaga aaatgggatt aattataaaa attgtacgct tacaggttct gttgaagtag
      541 cccctagggc aaatttagcc gatgcgattt gcgatcttgt ttcaagcggg gcaactttac
      601 aagcaaacaa tcttaaagaa gttaaagtca tttatgaatc tcgtgcttgt ttgattcaaa
      661 aagaaaatgc tttaagtaaa gaaaaacaag ccttagtgga taaaattatg ttgcgtgtag
      721 caggagtaat gcaagcaaga gaatctaaat acattatgct tcatgctcca aaagaaaagc
      781 ttgataaaat tcaagcccta cttccaggag ttgaaagacc gactatctta cctttagcac
      841 acgatgaaaa aaatgtagct ttacatatgg taagtaaaga aaatcttttt tgggaaacca
      901 tggaggcttt aaaagaagaa ggtgcgagtt cgattttagt tctgcctata gaaaaaatgt
      961 taaagtgagt aaaaaatgca aattttagta tatgataatt tggatgaaaa acaaaaagaa
     1021 gaagcgttaa aacgccctgc tataagtgcg aaagatgaaa tttcaaaaat agtaagttct
     1081 atcattaaag aagtgcaaga aaaaggcgat aaagctttga tagaacaagc tttgaaattt
     1141 gataaggctg aaatttcaaa gattaaaatc actcaagaag aaatcactca agcaagcaat
     1201 cgtttagata aagatttaca agaagctatt ttagtggctt atgaaaatat caaaaaattt
     1261 cacgaagccc aaatcccaca tgaaatcgct cttgaaacta caaaaggcgt taaatgtgaa
     1321 gttttaacac gccctataga aaaagtagga ctttacatac cagggggttt ggcacctttg
     1381 ttttcaacgg ttttaatgct agctattcct gcaaaaattg caggttgtga aaaaatcgtt
     1441 ttagcaagtc ctgcaaaaat caatgatgct gtgctttttt gtgctaagct ttgtggcgtg
     1501 gatgaaattt atcaaatggg cggtgcagga gctatagcag ctttgactta cggtacccaa
     1561 agtgttttaa aggtggataa aatttttggc ccaggaaatg cctttgtaac cgaagcaaaa
     1621 cgccaagtaa gtagtgatat aaacggagca gctattgata tgcaagcagg acctagtgaa
     1681 gttttagtca tagctgatga tttagctaat gaaaaatttg tagctagtga tttgctttca
     1741 caagctgaac atggtgcaga ttctcaagtg attttagtgt gtttaagtca agattttgct
     1801 aaaaaagcaa gtgatgaagt ccaaagtcaa ttagaacttt tgcctcgcaa agaacttgca
     1861 agcaaaagca ttgctaattc acgcattatc atagctaaag atttaaatca agccttagaa
     1921 atttcaaatc tttacgcccc tgaacatttg atcatacaaa ctcaaaatcc acgagaactt
     1981 ttaaaaggtg taaaacacgc aggatcagta tttttaggag cttattcccc agagtctatg
     2041 ggtgattatg caagtgggac aaatcatgtt ttacctactt atggacttac taaaacgcat
     2101 tctagtttag gtttggcaga ttttagtaaa agaatgaccg ttcaagagtt aagtaaagaa
     2161 ggttttttag ctttaggtaa aagtgttgaa attttagcac aaaatgagca tttagacgcg
     2221 cacaaaaatg cagtaacttt tcgtttagaa agcttaaaat gagtcaaaaa atccttttta
     2281 tagatagaga tggcacttta atagaggagc caaaaagcga ttttcaaatc gatactcttg
     2341 aaaaattgcg ttttgaaaaa gatgctattc ccactctttt aaaactaaaa aaatttggat
     2401 ttaaatttgt tatggtaagc aatcaagacg gtcttggaac accaagtttt ccaaaggaaa
     2461 attttgaaat cgctcatgaa aaaatgcttg atattttaaa aagttgcggt atagaatttc
     2521 aagatatttt tatttgtccg cattttgaaa atgaaaattg tgcttgcaga aaacctaaaa
     2581 ccgctatgtt agaagagtat atcaaacacg aactttatga taaggaacaa agttttgtta
     2641 taggagatcg tgagagtgat atgatcttgg cttcaaattt aggcgtgcgt ggtttaaaat
     2701 acggcgaact ttcttggaaa gaaatagaaa atgaaatttt aagttctttt agaagcgcga
     2761 gttatcaaag aactactaaa gaaacagata taaaagtaaa ggtatgctta aatgggggta
     2821 aggttagcat taaaacaggt attgattttt ttgatcacat gttagagcaa atcgctgtac
     2881 atggaggtat agggcttgaa atttcttgta aaggagattt ggaaatcgat gagcatcata
     2941 gcgttgaaga tgtagcctta gcacttggag cttgtatcaa aaaagcttta ggggataaaa
     3001 tcggcattgc aagatatggt tttgctttac ctatggatga gtgtttggca agttgtgcaa
     3061 tggatttttg caatcgtccc catttagtct ataaagccaa atttaaaaaa tctcatttag
     3121 gggctttaag cacagaaatg atcgagcact ttttttattc tttaagctat gctatgggcg
     3181 tgagtttgca tttaaaagtt aaaggcaaaa acgatcatca taaagccgaa gggcttttta
     3241 aagcctttgc aaaagctttg aaaatggcag taaaaataga aagtgaaaat ttagccagct
     3301 ctaaaggagt gatatgaaaa tcatcatcat cgatacagcc tgtgcgaatt tagcatcttt
     3361 gaaattttgt ctagatagat taggttttaa tgcaactatc agtagggatt taaaagagct
     3421 tgaaagtgcg gataagcttt ttttacctgg agtgggtacc gcaaaagaag caatgaaaaa
     3481 tttagaacaa tttaatctta ttgattttat tcaaaatacc aaaaaacctt tgcttggtat
     3541 ttgtttaggt atgcaaattt taggaaattt ttctgaagaa ttaaatcaag aaaccttaaa
     3601 actcatagat tttacaactc aaaaatttaa agctaaagaa ggctttactt ttccacatat
     3661 gggatggaat gaagtttata gctctcatgc tttgtttaaa ggcttagaag gggcttattt
     3721 ttattttgtg catagttatt gtgtaggact tgggaaatac actatagcag attgtgagta
     3781 ttcgcaaaaa tttagcgcaa gcgtaatgaa agataatttt tacggagtgc aatttcaccc
     3841 tgaaagaagt agcgaggctg gggaaatttt aatttcaaat tttattaagg atataggatg
     3901 actcaaatca tacccgcact cgatcttata gatggcgaag tggtgcgtct tgtaaaaggg
     3961 gattacgaac aaaaaaaagt atataaatac aatcccttaa agaaatttaa agaatacgaa
     4021 aaagcaggag cgaaagaact tcatcttgta gatcttacag gtgcaaaaga tcctagcaaa
     4081 agacaatttg ctttgataga aaaattagcc aaagaagtca gtgtcaattt gcaagtaggt
     4141 ggaggtatac gctctaaaga agaagttaaa gctttgcttg attgtggagt aaaaagagta
     4201 gttataggat ctatggcaat taaagatgcg actttatgtc ttgaaatttt aaaagaattt
     4261 ggtagtgaag ctatagtttt agccttagat acgattttaa aagaagatta tgttgtggct
     4321 gtaaatgctt ggcaagaagc aagcgataaa aagcttatgg aagttttaga tttttatagc
     4381 aataaaggct taaaacacat actttgcaca gatatttcaa aagatggtac catgcaagga
     4441 gtaaatgtaa gactttacaa acttatccat gaaatttttc ctaatatttg cattcaggca
     4501 agtggtggag tagcgagctt aaaagacctt gaaaacttaa aaggaatttg tagtggggtt
     4561 atcgtaggaa aagctttatt agacggagtt tttagcgtag aagaagggat aagatgtcta
     4621 gcaaattaag ctacaaagaa cttactttag aaattttaaa acaaagtgac agacctttaa
     4681 gtgttaatga aatttggcaa aaagctcttg aacaaggctt agataaaaag ctttctagca
     4741 taggacaaac tccaattgct actttagggg ctaggatata tgttgatata aaagaattgc
     4801 aacacaattc tttgtttatc aaagcttccc aaaaacctac aactttttgg ctaaaagaaa
     4861 gagaaaatga acttttaaag cttgataata aaaatgaaat tactaacgaa aaacaagaaa
     4921 aaaataaatt tcatgaaaga gatttacacc ccttgcttgt aaaattttta tatgaaaatt
     4981 tagattttaa tttaaattgc aaaacaattt accatgaaca aagcaaaaag ggtaaaggcg
     5041 gggaagataa gtggaattat cctgatattg taggggttta ttttccttat gatgattatg
     5101 aaaaagagac cataacactt ttagaaaata tcaaacaaaa tagttataag cttttttctt
     5161 ttgaacttaa aattgcttta aatttttcaa atttaaaaga atgctatttt caagctgtaa
     5221 gcaattctag ctgggcaaat gaaggctatt tggttgtttt acaagaaatt gatagcgaag
     5281 ttttaagtga gttaagacgc ttaaatcaaa gttttggcat aggagtgata aaacttgaaa
     5341 aagatatttc aaattctcaa attttaatta gtgcaaaaga aaaagaactt gatattcaaa
     5401 cactaaatat gctgatcaat aaaaatccaa attttaaaga atttattgat gatataaaca
     5461 aacaaattaa agtgggcaaa gaagcaaaaa ttcaagctaa ttttgatgaa attaaaagcg
     5521 atgaagaaat ggaaaaatat cttaaagaaa aatgtatttt ggagaaataa atgcttacaa
     5581 aacgcataat tgcatgttta gatgtcaaag atggcagagt agtaaaagga acacaattta
     5641 aaaaccataa agatatggga gatatcatag agcttgctag gtattattct caaaatggta
     5701 ttgatgagct tgttttttat gatattgctg caagtgctag aaaagaacgc atatcaagag
     5761 aatgggtaag tgaagtagca aaaaatatca atatttcttt ttgtgttgca gggggtatta
     5821 aaagcgaaga agatgcagct gaacttttgg ctaatggggc agataaaatt tctatcaatt
     5881 ctcctgcttt aaatgatcca agcctaatca cacgccttgc taaaagcttt ggcgtgcaat
     5941 gcgtagtagt agggattgat agttttaaag atgaaaatgg aaatttaaaa gtatttcaat
     6001 acacagggga tgaaaaaaca agtaaacata gtggaaaaag cactttagaa tgggttaaaa
     6061 aagtgcaaga tctaggtgca ggcgaaattg ttttaaatat gatgaatcaa gatggtgtta
     6121 aaaatggcta tgatttagaa caattagaag ctgtatataa aatttgtaaa gtacctttaa
     6181 tcgcaagtgg gggagcggga aaaatggaac attttttaga agcttttaaa ctaggtatag
     6241 atggggcttt agctgcttct gtttttcatc aaaaacttat agacattaaa gaattaaaaa
     6301 tttatcttaa aaatcaaggc ttaagtataa ggatataata tgcaaaattt caaagaactt
     6361 aatgaaaaaa tcgcttggca aaaagtggat aatcttttac ctgtcatcat ccaagatgca
     6421 aaaacttgcg aagttttaat gctaggcttt atgaataatg aagccttaga aaaaagctta
     6481 gaaagtggca aagtagtctt tttttcacgc acaaaacagc gtctttggat gaagggtgaa
     6541 gaaagtggaa atttcttaaa tatcatagat ttaagcttag attgtgataa tgacacgctt
     6601 ttaattttag caaatcctgt agggcctact tgtcatacgg gcgatatttc ttgttttgaa
     6661 aaaatttcta aaaatgcaga ttttgttttt ctagccagac ttgaaaaact tattaatgca
     6721 cgcaaaaatg ccgatgaaaa tacttcttat acagcaaaac ttttcaaaag tggtacaaaa
     6781 cgcatcgcac aaaaagttgg tgaagaaggc gtagaaacag ctttagcagc gacagtaaaa
     6841 gataaagaag agcttatttg tgaagcagcg gatttaatgt atcatttaag tgttttactt
     6901 gcagatgcaa atcttagttt ctcagatgtg atttcaaaat taaaagaaag acataaagct
     6961 taaagcttta tgtaaaataa atttatatca atgcaaggct tcattaagtt tgactgcttt
     7021 tttatttaaa gctactatca tagcaccact tatagaatct tgacggaaat gtagcccatt
     7081 taaaccttta agctctaagc ctttgtaaat ttctttatca aaattaaaat aaggattaag
     7141 tttagcaagt tcttcggcat ctttgagtaa aaatttcgtt ccttctagca ctgcaatacc
     7201 tgcatcaact atacaattat cccctaaagg aattcctgtc actgaattag cccctaaaag
     7261 acaagccttg cctacgctta tagcattgcc acttgttcca cttaaaacac ctaaaatcga
     7321 agctccgcca cctacatcag aaccttctcc tactatagca cttgaactaa tacgcccttc
     7381 aaccatacaa gctcctgttg tacctgcatt aaaattcaca taacttgccc ctggcatgat
     7441 ggttgttcct gctgctaaag acgcacccat tcttacttta gaactttcta aaattcttgt
     7501 attatcctca gggataatat gtgctaaaaa tcttgggaat ttatcaacaa aatcgatttt
     7561 tggatattga ttgctcattt ttaaacgcat ttcatttgct cttaaatact caagctcgat
     7621 aggcttatca tcactccaag ctacattgct taaaagtcca aaagctccat ttaaattgat
     7681 acttcttaaa ggtacttttt tagtagaaag caaataaagt tttagataaa tactttctac
     7741 acttaaaggt tctttatctt caaaaagaca aacaaaagaa aattcatcgt ctttaaattt
     7801 atctttgata atctttaata aatcaatatt ttgatgccca tcttcttcta aaaaaggttt
     7861 aaaacaagaa agtgcaaaat caatatcttc taatttcaaa gtttgcacaa actcactcgc
     7921 attaaaatca atctccacgc ccctttgcat aaaagcttca agcatgattg ccgctgagcc
     7981 aaaattttgc tcatagttaa tcaaagcaaa acttgcttgt aagattttat ttttatttaa
     8041 ctgtcctcta tcaagccttg ctataccaaa agctttaggt tttttatagc cacttttttg
     8101 ctcgatttgt ttgattaaaa gtaaaaaatc ttctttagta ttaatcattt tcttttcctt
     8161 atccacttaa tttttaatgc gaacacgcac tttttccatt catcacaggt tgtatagcag
     8221 aattatccgc accaccttca ttgttaattt tttctataaa gctccaaatt ttttcagccg
     8281 ccattaaata acgctttgaa ctcacacttt cagggtgata aaaactcaca ggcttgcctt
     8341 catctccacc ttctcttact atcatttcta taggaatttg tgctaagact tcacttttat
     8401 aggcttttgc catatcctca gccgttcctt tgccaaaaat atcatactct ttaccgttat
     8461 caggacataa aaatccactc atattttcaa tcacacccgc tataggaatg tgaagtttat
     8521 taaacatatc taaagctctt ttactatcgt ctaaagatac ggtttgaggc gtacttacac
     8581 aaactcctgc agcaatagga atgctttgtg cagaagtaat ttgcgcatcg cctgttcctg
     8641 gaggcatatc caaaaacaat acatcaagct caggccaaat tacatcagct aaaagttgct
     8701 caattgcttt catgatcata gctccacgcc acataaggcc ttgaccctct tcgatcaaaa
     8761 cccccatact catcatataa acaccatgag ttaaaatagg ctttaatctc tgccctacta
     8821 cttcaggctg agttttggtt tcacctagca ttcttggaat atttggccca taaatatccg
     8881 cgtctaaaat acctactctt tttcccattt tagccatgga aattgctaaa tttactgtag
     8941 ttgtagattt acccacacca ccttttccac ttgaaaccat gatgaaattt tttacttgtg
     9001 gagcgatatt ttttccactt cttgaattac ttttttcttc aggaattttt ggagtaatga
     9061 tattaagttc aatatttttt aaagccaaac tcgataaagc ttcaatagta tttttacgaa
     9121 tttcattagc tacttcagga tttgctgaaa cgatttctat atcaatgaat acaccatcat
     9181 cttgaatttt aatatctttt acaaagttaa aactcactat atccttttca aaaccaggat
     9241 attttacagt ttttaatttc tctaaaattt gttctttcat attttttcct tgtcttttaa
     9301 aaaaatcaat tttactaata aaatgataaa atttagcttt ttataagtgt ataatatggt
     9361 aacattataa aaaccaacaa tattaaaaag aggaatgaaa aaatgagtga aatgagcctc
     9421 attatgttag cagctggaaa ttctactcgt tttaatacaa aggtaaaaaa acaattttta
     9481 cgacttggaa atgaccctct ttggctttat gcaacaaaaa atttaagctc tttttatcct
     9541 tttaaaaaaa tagttgttac ctctagtaat atcacttata tgaaaaaatt taccaaaaac
     9601 tatgaattca tagaaggtgg tgataccaga gcagaatcct taaaaaaagc cttagagctc
     9661 atagatagcg aatttgttat ggtaagtgat gtagcaaggg tattggtgag taaaaatttg
     9721 tttgatcgtt tgattgaaaa tttagataaa gcagattgta ttacccctgc tttaaaagtt
     9781 gcagatacaa cactttttga caatgaagcc ttgcaaagag aaaaaatcaa actcattcaa
     9841 accccgcaaa tttctaaaac caaattgctt aaaaaagcct tggatcaaaa cctagaattt
     9901 acagatgata gcacagctat agctgcaatg ggtggaaaaa tttggtttgt tgaaggtgaa
     9961 gaaaatgcaa gaaaactaac ctttaaagaa gatcttaaaa aacttgattt gcctacacct
    10021 agctttgaaa tttttactgg caatggtttt gatgtgcatg aatttggaga gaatcgccct
    10081 ttgcttttag caggagtgca aattcatcct actatggggc ttaaagcaca cagcgatgga
    10141 gatgttttag ctcactcttt aaccgatgcg attttaggtg ctgcaggact tggagatata
    10201 ggagagcttt atcctgatac tgatatgaaa tttaaaaatg ccaactccat ggagctttta
    10261 aaacaagctt atgataaagt cagagaaata ggttttgaac tcattaatat agacatttgc
    10321 gtcatggcac aaagccctaa acttaaagac tttaaacaag ctatgcaaag caatatagct
    10381 catactttag atttagatga atttagaatc aatgttaaag ccacaacaac ggaaaaattg
    10441 ggttttattg gaagaaaaga aggtatggcg gtgcttagta gtgtaaattt aaaatatttt
    10501 gattggacaa gattatgaaa gttttaatta ttgaaaatga aatttatcta gcgcaaagca
    10561 ttagcattaa actaagtgat gctggatata gctgtgaaat tattaactcg tttgatgaat
    10621 acaatggtga aaaatactat gacattatac tgctttctac aaatactaat aattttctaa
    10681 aagccgtagg tcagtttaaa catagtatta ttattttgct tatttcttat ataagtacag
    10741 atacagtttc aaatcctttg aaattaggtg ctagtgatta tattcaaaaa ccctttatga
    10801 tagaagagct gattagaaaa ataaagcatt atcaggattt tagaaaactt tcaatcctta
    10861 ataaagctta tcaaagctat atcaaatcaa gattagaaac aatcaaaatt ccagagtata
    10921 attataaaaa attaaaactt ccattgatat taaaatccaa caagcaaagc agtgctgatg
    10981 cttttgtttt taattatgca aatgaatgtg acattactct ttcttttatt gatttaacat
    11041 ctacaaattc agttgaaaaa gttatgaaac ttcccacaga aaacaatctt ttatttttga
    11101 gtaattttca agcattaaaa gcagcagaaa aggaaaaact cctagatttt atacaaaaca
    11161 aaaatgttat tttgcatacc aattcaaata cagatgattt aaaaataaac tgcattaatt
    11221 taaatgataa tgaaaaaaat atcaatagca atgaaatttt aactatagat gagtatgtaa
    11281 aatatgttat tataaattac caaaatatat ttcctgatac tgatctttca aaaaaattag
    11341 gcatttcacg taaatcttta tgggaaaaaa ggaagaaata tgaaatcagc aagaaaaaat
    11401 aaaaacatta tcatagatca aaatgaattt ggcatcttat cacttattaa agaaggtttg
    11461 ctaggcactt gcactcattt aatgaatgaa aaagaagtca atgaaatcat taaatcagga
    11521 aaatttaaag gagaaagctt tccctatccc ttaagctttg caccaaaaaa tgccgaagaa
    11581 gcactaaatg atataaaatc tggcgataga atcgatctca tgctagatga aaaagtagta
    11641 ggacatatag attttaaaag ccaatttaaa aataataaaa atttttctga tattttcagt
    11701 cctaacactt gctctttaga agacatggga acaacttgca taagtggaaa aatagaaatt
    11761 tataattctc aaattgaaaa aataaaagaa aattttcaac aaatcaaaaa caatcttaat
    11821 gcacaaaaaa ttactgctat agtttcaagt tttgatcctt tgcatcgtgc ccatgaaaga
    11881 atgtttcgtt ggactattga taaagcagat ttagttgtaa tttttcttgt agaatctttt
    11941 gatgtaaatg ggtttgaatt cgaacttaaa gaagcatatt tgaaaaaatt tattcaaaac
    12001 tatcttccac cggatagaat tttcattttt ccattaaaaa atattaatat ttttcacgct
    12061 catttaaatc ctggcttaga aagtattatc gcaaaaagtc taggttgtac caaactagta
    12121 gtaggacaaa atcatacagg acttggaatg ttttatgatg ataaccaacc aaaaaccata
    12181 cttgatgatt tttccaagga ctatggcata gaagtgatcg ttttgcctga atttgtattt
    12241 tgcgatcaat gtcgcatgat tgttagcaca agatcttgcc ctcatggttg tcatcaccat
    12301 ttgcactata attctcagtc tttaaaagat ttactaagag cgggtatcat tcctccagca
    12361 attttcatac gcaaggaagt atctagtgtt attttaactt ctctttttcc aaatagatta
    12421 aaaaatatgc aaaaaattta taatgagctt tttccaactg atggaatttt agaatacaaa
    12481 aatgatgaag aattttatca aaaactttta gaaattcatc aaatgtctta tatggtgtaa
    12541 taaaatgcaa aaattatttt taactttttt ttattcaggt tctgtaaaaa aggcaagtgg
    12601 gacttttggt actatcgctg ctttaatacc tgcttttttt atacttaaat atctcgggat
    12661 taatactttg tttttactaa gcattttaat ttttgttgca agtattcgtg ttatagatga
    12721 ttatgaaaaa aaaacaggaa ttcacgatga caaacacata gttatcgatg aggttgctgg
    12781 agtttttctt gcttgtgcta ttgcagcaag tgttgaaaac tcgatagtca attttatttt
    12841 ggcttttgtt ttattcagac tctttgacat tacaaaacct tctattattg gcaagataga
    12901 taaaaaagtc aaaggcggac taggtgtaat gcttgatgat atgttagcag gattgtttgc
    12961 tggactttta agtgcggtaa tttatggatt tttacttaaa tttaatttag ttttttggga
    13021 tataaattta aaa
//
LOCUS       DAPIVO010000049        12843 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.049, whole genome shotgun sequence.
ACCESSION   DAPIVO010000049 DAPIVO010000000
VERSION     DAPIVO010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12843)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12843)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12843
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.049"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..1149)
                     /locus_tag="RJ239_001329"
     CDS             complement(<1..1149)
                     /locus_tag="RJ239_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331440.1"
                     /translation="MTINSANPYQNLTLSNPLQNSSALNLIKDSKALDQEGNENSLEQ
                     LSYIFNNTTYASEFGFRINEEGFFDKDLNKIANIPESYDINIKSVRSIAKELAKQDEN
                     LNYNKIDLPYLLNSYHSSLKSINSEFLQDDNAYLSRDLISKLSSGFSTDNGEFLGQIS
                     RIYNNQEEIDLALSNITNLNTLMLDNKITNFHFDKAIENTSSNEILKPYLTKNAEVSK
                     SGLLMNFIYHDIKTQNEKEFNFFMKPATLELSSHQNLQKILKGETDIEDYIKKENEKK
                     MSFDLYLYINGVDKKTSTQDKLSVFFQQYINYQKDMDLREFANSSSIFQIYIDQNRND
                     FDALKKQYQNQSQDTQRLEEANQLRSSSIENFLDRRQKQANINKILNSY"
     gene            1305..1496
                     /gene="rpmI"
                     /locus_tag="RJ239_001330"
     CDS             1305..1496
                     /gene="rpmI"
                     /locus_tag="RJ239_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HDV7331441.1"
                     /translation="MPKMKSVKSAVKRFKVGKNKIKRGSAFRSHILTKKPAKRMRGLR
                     TAKYVHSTNVKAVEKMLGI"
     gene            1590..1943
                     /gene="rplT"
                     /locus_tag="RJ239_001331"
     CDS             1590..1943
                     /gene="rplT"
                     /locus_tag="RJ239_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HDV7331442.1"
                     /translation="MARVKTGVVRRRRHKKVLKLARGFYSGRRKHFRKAKEQLERSLV
                     YAYRDRRRKKRDFRRLWIVRINAACRLNDLSYSRFINGLKKAGIELDRKILADLAMND
                     AAAFAKIAEAAKKAL"
     gene            complement(1996..2808)
                     /locus_tag="RJ239_001332"
     CDS             complement(1996..2808)
                     /locus_tag="RJ239_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HDV7331443.1"
                     /translation="MGIAKSLVAIFFYEVENFNDFKPRYLKTFIQKYSDFKYYYLNIR
                     AQKLEMTNEINKIILNQLKQNTSEIDKNTSIFKEIFEELENIRRSLTTISESFTNFTN
                     YLEYNLYQSEEKMNLEKEVQSSLKNIDQLNSILDLISGIAEQTILLSLNAGIEAARAG
                     KLGRGFAVVADEVRKLSENTQMGLGEMEGAIKLVIQTIQSIAKSSNSSTQEMNFIRDK
                     TNEFSKIISNLINSGKEISDKLEQRSNVSEDFEKNVNQLKCYEDVLAKLNQY"
     gene            complement(2812..3174)
                     /locus_tag="RJ239_001333"
                     /pseudo
     CDS             complement(2812..3174)
                     /locus_tag="RJ239_001333"
                     /inference="COORDINATES: protein motif:HMM:NF021926.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FIST C-terminal domain-containing protein"
     gene            complement(3099..3653)
                     /locus_tag="RJ239_001334"
     CDS             complement(3099..3653)
                     /locus_tag="RJ239_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HDV7331444.1"
                     /translation="MILFSEDMIENLCTNKIKLFSDIKDYTERKKLIEKEVLFINIPF
                     EAHCINTLYYLIYDGLSQSESSLLELLYKHNPYPCALVGGGSSGNMDFSGAFIFYNGE
                     ILKNQALSIHVQFKPKYRFNLMKSQNFNPQSNITFTILDVSLYDKTVRELINKKPFRL
                     KLYVIILTALLKNLKIKCKNILLL"
     gene            4135..4992
                     /gene="cheP"
                     /locus_tag="RJ239_001335"
     CDS             4135..4992
                     /gene="cheP"
                     /locus_tag="RJ239_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cheVAW transcriptional regulator CheP"
                     /protein_id="HDV7331445.1"
                     /translation="MIGDMNELLLKSVEVLPPLPDTVSKLRKYVSEANSNIETMKVAE
                     IISSDPLMTAKLLQLANSPYYGFTREITTINQVITLLGVGNIINIVMADSIRDNFKID
                     VSPYGLNTQNFLKTCNEEATFIANWLNDEDKKLSHLLVPCAMLLRLGIVIFSNFLIQN
                     HKDKDFLAFLNKNENLALAENEFLGVDHISFLGFLLHRWNFDDVLIESICFVRTPHAA
                     REKVKKSAYALAITDHLFAPHDGSSPFNAKAAVALLKEAKTQGINFDLNNLLSKLPNK
                     AKENLNKED"
     gene            5020..5499
                     /gene="cheQ"
                     /locus_tag="RJ239_001336"
     CDS             5020..5499
                     /gene="cheQ"
                     /locus_tag="RJ239_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cheVAW transcriptional regulator CheQ"
                     /protein_id="HDV7331446.1"
                     /translation="MMKSLILPPNEFLDHYILNAEFHRFAGISKNAYKFWKNAEIGRY
                     QGTRIIFLHRNCILEKHQQALRQCSGLNGFVLASAFCSFTGLAPSHLVEKNNSSIYKL
                     LELKEICGIKFVNLKKFYDFLGLNYHQHIYIEKCHFFSPAPFEKRIKITESMCVGYY"
     gene            complement(5468..6778)
                     /locus_tag="RJ239_001337"
     CDS             complement(5468..6778)
                     /locus_tag="RJ239_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7331447.1"
                     /translation="MSKTLNQKDIKVLGLSSLGGTLEFYDFIIFVFFANYISTNFFPK
                     DLSSFWQMFNTYGIFAAGYLARPLGGVILAHFGDKFGRKRMFMISILLMVIPTFTLAF
                     IPNYESIGFLCIVLLVFIRICQGIAIGGELPGAWVFVYEHAPQGQKRTYLGILTASVV
                     GGILLGSLVFLIMNKIYTQEELHEWAWRIPFFLGGIFGIISAYLRKFLRETPVFEQMK
                     KDKALEKFPLKEVFKKAKMGIVLSMMITWVLTGCIVVMILLMPSYMAKILQINTSIQT
                     YLQIGGILLICLGCIISGILADKIGVIKSCVFFSVFFGIASLLYFNTLYRQNADFNLV
                     ACLYLLVCFFSGVMNFCPLIMSEVFDAKIKFSGLSFSYNIAYAIAGGLTPQLAFFLHS
                     FALNNLSNFWRFSLGLYVFFLAIIALLCAFIFSYLNNTQRTYSQ"
     gene            complement(6781..6936)
                     /locus_tag="RJ239_001338"
     CDS             complement(6781..6936)
                     /locus_tag="RJ239_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="highly acidic protein"
                     /protein_id="HDV7331448.1"
                     /translation="MAYEDEEDLNYDDYENEDEEYPQNHHKNYNYDDDDYEYDDDNND
                     DDFYEMD"
     gene            7029..7502
                     /gene="moaC"
                     /locus_tag="RJ239_001339"
     CDS             7029..7502
                     /gene="moaC"
                     /locus_tag="RJ239_001339"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HDV7331449.1"
                     /translation="MKLSHLDEKNHPKMVDVSDKNITLRIATASGIIYMSQEAFDVIK
                     NNTAKKGPVLQTAIVAAIMGVKKTSEIIPMCHPLMLSKVETNIVEFVKECAFKLIVTV
                     KCEGKTGVEMEALSGVSIGLLTIYDMIKAIDKSMRITDIVLESKEGGKSGKFVRS"
     gene            7480..7743
                     /locus_tag="RJ239_001340"
     CDS             7480..7743
                     /locus_tag="RJ239_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF493 domain-containing protein"
                     /protein_id="HDV7331450.1"
                     /translation="MVNLCDLKKEPQINYPTFWDYKVIFEVHVKASEIFEEILGQREY
                     KFKHSNSSASGKYQSYLLNVYVDSKKDRLDIFDKLKAKAKFVL"
     gene            7733..8893
                     /locus_tag="RJ239_001341"
     CDS             7733..8893
                     /locus_tag="RJ239_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331451.1"
                     /translation="MYFKKEGKMKNTLIIFENSLSNLGKDEASDLLEDLSFNLAYKQI
                     SHNPHETKKVLNSLLVEFLTILKKLDFFDDENVTKVIKALVKASIVDAQNSLYEYISE
                     AELLNKQIENQKNLIKNQISDNFFEFENILQECSFCDEFSGGLNDAILFDIEMLGILK
                     ETAESAFLTTLEKAEDIELTSSEIAKNLVYNAICEAHFEKERILKISSIILNTAFEIA
                     NESMAYAKDLCLGVIKGTRDGIVLAMEKFKASLTYANFEEDVSLKSKELIGIEDDFIA
                     LLKKEIQLQNDPCKSIVENLLEHELDNLFAKFRRLAGESREQLILVLNDIKKNPKIND
                     FNKLTQRKLNRFKQEIFELEKIASEKYKDLNSKKAKKLGVRLWEKAKKFVKK"
     gene            complement(8912..9670)
                     /gene="xth"
                     /locus_tag="RJ239_001342"
     CDS             complement(8912..9670)
                     /gene="xth"
                     /locus_tag="RJ239_001342"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HDV7331452.1"
                     /translation="MKLLSWNVNGLRAICDKNALDWIAQEQIDFIGFQEIKAHEDKFP
                     KKIYEYPFKHMYFNSAKRAGYSGVMSLCNFNSEVKKCEFFDDEEGRVLEHRFKNIALF
                     NIYFPNGQKDEERLNFKMQFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKA
                     NANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDY
                     FFISKGLKDKLKNAFIRDDIFGSDHAPVGIEIDI"
     gene            9788..11326
                     /gene="eptC"
                     /locus_tag="RJ239_001343"
     CDS             9788..11326
                     /gene="eptC"
                     /locus_tag="RJ239_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A/FlgG phosphoethanolamine transferase
                     EptC"
                     /protein_id="HDV7331453.1"
                     /translation="MLRLTWFQFTFFNSLMIVLLNFNLFYFVYEKNTQNWLITFVFIV
                     AYFALVHVICSLLFIKFFTKFFSILFIISSFLSVYFISFYGVLIDSDMMQNVVQTDIK
                     EVKDLLNLKLILFVVLALLLVFYVVKVKIDYYGSFKSHIKIKIINIISGLIVVCAVLI
                     PLSKTFLPFFRNYNEIRMYNTPFYQIYAVYRYYVRFVKAKPEFKTIANDAYRENNHTK
                     KLLVLVVGETARAANYSLGGYTKNDTNFYTKKDNVVFFDNFSSCGTATAVSLPCMFSI
                     SKRENYSSSEFQENAMDVLYKTGVDAVWFDNNSGGCKGVCDRLAYKQKLSSDLDENLL
                     APFKEKLNHLSDQNIIVLHLQGSHGPTYYKRYPSEFKKFTPTCDTNELSKCDSEALIN
                     TYDNTLLYTDYLLSEIIKLLKEQKSYESSLFYLSDHGESLGENGIYLHGMPYAIAPSY
                     QTHIPAIFWSNDKNLMNLAKEYKGLKLSQDNLFSTLLGYFDVKTSVYEPEYDLLNPKL
                     KANP"
     gene            11323..11679
                     /locus_tag="RJ239_001344"
     CDS             11323..11679
                     /locus_tag="RJ239_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HDV7331454.1"
                     /translation="MKPKYHFLNNARYALEGLFALFKNEMAFRIELCIIIPAIVFSFF
                     LKISFLEHLLLISVLILILIVEALNSAIEACVDLITNEWHEKAKISKDCASAAVFFSV
                     LLALFVWGFILYNIYL"
     gene            11676..11921
                     /locus_tag="RJ239_001345"
     CDS             11676..11921
                     /locus_tag="RJ239_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication/maintenance protein RepL"
                     /protein_id="HDV7331455.1"
                     /translation="MKFENLIREILGKKRFELLKFLCENADENGFIMIKISDLEEKLH
                     QSKPTIIATFKFLEEKKLFKRLKNGFYQLNIGDKNET"
     gene            11911..>12843
                     /gene="pyrC"
                     /locus_tag="RJ239_001346"
     CDS             11911..>12843
                     /gene="pyrC"
                     /locus_tag="RJ239_001346"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HDV7331456.1"
                     /translation="MKLKNPLDMHLHLRDNQMLELIAPLSARDFCAAVIMPNLIPPLC
                     NLEDLKAYKMRILKACKDENFTPLMTLFFKNYDEKFLYSAKDEIFGIKLYPAGITTNS
                     NGGVSSFDIEYLKPTLEAMSDLNIPLLVHGETNDFVMDRESNFAKIYEKLAKHFPRLK
                     IVMEHITTKTLCELLKDYENLYATITLHHLIITLDDVIGGKMNPHLFCKPIAKRYEDK
                     EALCELAFSGYEKVMFGSDSAPHPKDTKECCGCAAGVFSAPVILPVLAELFKQNSSEE
                     NLQKFLSDNTCKIYDLKFKEDKILTLEEKEWQVPN"
BASE COUNT         4538 a         1685 c         1902 g         4718 t
ORIGIN      
        1 ataagaattt agaattttat ttatatttgc ttgtttttga cgacgatcta aaaaattttc
       61 tatagagcta gaacgtagtt gatttgcttc ttctaatctt tgcgtatctt ggctttggtt
      121 ttgatattgt tttttaagag catcaaaatc attgcgattt tgatcgatat aaatttgaaa
      181 tattgaactt gaatttgcaa attctcttaa atccatatct ttttggtagt taatatattg
      241 ttgaaaaaat acagatagtt tgtcttgagt gcttgttttt ttatctacgc cattaatata
      301 aagataaaga tcaaaactca tctttttttc attttctttt ttgatgtaat cttctatatc
      361 tgtttcgccc ttgagaattt tttgtaaatt ttgatgagag cttagttcta aagtggcagg
      421 tttcataaaa aagttaaatt ctttttcgtt ttgagttttt atatcatggt agataaaatt
      481 cattaaaaga ccagattttg atacttctgc atttttagtt aaataaggtt ttaaaatttc
      541 attagaagaa gtgttttcta tggctttatc aaaatgaaaa ttagttattt tattatctaa
      601 cattaaagta tttaaatttg tgatattgct taatgccaaa tcaatttctt cttgattgtt
      661 gtaaattctt gaaatttggc ctaaaaattc tccattatct gttgaaaaac ctgatgatag
      721 ttttgaaata agatcgcgac ttaaataagc attatcatct tgtaaaaatt ctgaatttat
      781 agattttaat gaactatgat agctatttaa aagataaggt agatcaattt tattgtagtt
      841 taaattttcg tcttgttttg cgagttcttt tgctatgctt ctaacacttt taatgttgat
      901 atcataagat tctggtatat ttgcaatttt atttaaatct ttatcaaaaa aaccttcttc
      961 attgattcta aatccaaatt cactagcata agtggtatta ttaaaaatat aacttaattg
     1021 ttctaagcta ttttcatttc cttcttgatc caaagcttta ctatctttaa tcaaatttag
     1081 agcagagcta ttctgcaaag gattagataa ggttaaattt tgatatggat ttgccgaatt
     1141 tatagtcatt ttaaatcttt ccaaaatatt gctgattttt tataagcaaa aggtgtgcca
     1201 agttttttaa aaattaaatt cagtcaaaaa ttagaaaaaa tttgatagta tttagctttt
     1261 cttttaattt gaaaaataaa aatttatcta aataaggaaa gcgtatgcca aagatgaaaa
     1321 gcgttaaaag cgcagttaaa cgcttcaaag taggtaaaaa taaaatcaaa agaggctcag
     1381 cttttagaag tcatattttg actaaaaaac ctgcaaaaag aatgcgtggt cttcgcacag
     1441 ctaaatatgt gcatagcaca aatgtaaaag ctgttgaaaa aatgctagga atttaagttt
     1501 ttgactaaaa gtcattcaaa ctcccctctg agataaaatt tcaagggtaa gctccaaatt
     1561 tggacgccac tttatgaaag gaaataaaaa tggcaagagt aaaaacaggt gttgttagac
     1621 gccgcagaca taaaaaagtt ttaaaattag cgcgtggttt ttatagtgga cgccgcaaac
     1681 attttagaaa agcaaaagaa caattagaaa gaagtctagt ctatgcttat cgtgatagac
     1741 gccgcaaaaa aagagacttc cgtcgtcttt ggattgtgcg tatcaatgct gcttgcagac
     1801 tcaatgattt aagttattca agatttatca atggtcttaa aaaagcaggc attgaacttg
     1861 atagaaaaat tctagcagat ttagctatga atgatgctgc tgcttttgca aaaattgcag
     1921 aggctgcaaa aaaagcactt tgatttttta gtataagaat ttcaagattt ttgattcttg
     1981 aaattcttaa ttttttcagt attgatttaa tttagctaga acatcttcat aacatttgag
     2041 ttgatttaca tttttttcaa aatcttcgct gacattgctt ctttgttcca atttatctga
     2101 aatttcttta cctgaattta taagatttga aatgattttg gaaaattcat tagttttatc
     2161 tcttataaaa ttcatttctt gagtactaga attggaactt tttgcaatgg attgtatggt
     2221 ctgaataact aatttgatag ctccttccat ttcacctaga cccatttggg tattttctga
     2281 aagttttcta acttcatcag ctacaactgc aaatccacga ccaagttttc cagctctagc
     2341 agcttctata cctgcattta aagataaaag gatagtttgt tcagcaatcc ctgaaataag
     2401 atctaaaata ctatttaatt gatctatatt tttcaaagag gattgtactt ctttttctaa
     2461 attcattttt tcttcgcttt ggtaaaggtt gtattctagg tagttagtga aattggtaaa
     2521 actttcacta atagttgtaa gacttcttct tatattttca agttcttcaa aaatttcttt
     2581 aaatatactt gtatttttat caatttctga tgtattttgt ttgagttgat ttaagattat
     2641 tttattaatc tcatttgtca tttctagttt ttgagctctt atattaagat aatagtattt
     2701 aaaatcgctg tatttttgta tgaaagtttt taaatatcta ggtttgaaat cattaaaatt
     2761 ttcaacttca taaaaaaata ttgccactaa actttttgca attcccactc cataaatttc
     2821 tccaaaacta gaaaaaccaa ctataggaaa atcattaaaa tggatttgat ttaaatgttc
     2881 tttgttgtga agccttctta agatacaatc gttaaaaatt gctcctagtg gttttggttt
     2941 attaagagaa aatttttcat aatctttttt tatagcttca ataaaatttg tttttttaag
     3001 caagcttaat tcatgagcgc tttctatatc acaataacta aataatgttt tatttgggtt
     3061 gatttccata ggggaaataa gatagtcttc tccaattttt aaagcaaaag tatattcttg
     3121 cattttattt ttaagttctt caaaagtgca gttaaaataa ttacataaag cttcaaccgg
     3181 aaaggttttt tattaatcaa ttcgcgtacg gttttatcat ataagcttac atcaagtatg
     3241 gtaaaggtga tattgctttg aggattaaaa ttttgagact tcattaaatt aaaacggtat
     3301 ttaggtttaa attgaacatg tatgcttaaa gcttgatttt ttaatatttc tccattataa
     3361 aatataaatg ctccgctaaa gtccatgttt ccgctagacc caccccctac taaagcacaa
     3421 ggataggggt tgtgtttgta caaaagttct aaaagagaac tttcgctttg acttaaacca
     3481 tcataaatta aataatacaa agtatttatg cagtgtgctt caaaaggtat atttataaat
     3541 aaaacttctt tttctatcag tttttttctt tctgtataat cttttatatc actaaaaagc
     3601 ttgattttat ttgtgcaaag attttctatc atatcttcac taaaaagtat caagcttatt
     3661 ccttggatat tttgtttata aggactgttt tcaatgtttg agttagaatc aaggttgcat
     3721 aataaatcag tagcactgct taagatgata tcacattgct catttataga attttgaatc
     3781 ttatttccta tgatcgctag attaagttga ttgacacaaa gcctataatt aattttggct
     3841 tgatgtttat tttttttaat ttttcttcaa gttcatttta ttgaagatat agagcttcta
     3901 aaactttttt acttcttctt tttttgttga gcttttattt ttaaaattaa aaaaacatca
     3961 attttactcc attaaaacta ttttttaatt actagttaac taaatcaaga caccataaat
     4021 tcgacattta tttgtaattt ttattatacc ttaagtcata aaaaatgcaa taagtaaatt
     4081 aaaatttaga tataattgca aattataata atattaatta aggataaatt aaatatgatt
     4141 ggagatatga atgagctttt attaaaaagc gttgaagtat tgccaccttt acctgatact
     4201 gtaagtaagt taagaaaata tgtgagcgag gctaattcaa atatagaaac tatgaaagtt
     4261 gctgaaatca tttcaagcga tccgttgatg acggctaagc ttttgcaatt agcaaattct
     4321 ccttattatg gttttacaag agaaattaca accataaatc aagtgattac tttattaggc
     4381 gttggtaata tcatcaatat agttatggct gactccatta gagataattt taaaatagac
     4441 gtttcacctt atggtttaaa tactcaaaat tttttaaaaa cgtgcaatga agaggcaact
     4501 tttatcgcaa attggcttaa tgatgaagat aaaaaacttt ctcatctttt agttccttgt
     4561 gcaatgcttt taaggcttgg tattgttatt ttttcaaatt ttcttataca aaatcataag
     4621 gataaggatt ttttagcttt tttaaataaa aatgaaaatc ttgctttagc ggagaatgaa
     4681 tttttaggcg tagatcatat ttctttcttg ggatttttgt tacatcgttg gaattttgat
     4741 gatgttttga ttgaaagtat atgttttgtt cgcactcctc atgctgctcg cgaaaaagtg
     4801 aaaaaatccg cttatgcttt agcaataaca gatcatcttt ttgctccgca tgatggttct
     4861 tctccattta acgcaaaagc tgcagttgct ttacttaaag aggcaaaaac tcaaggaatt
     4921 aattttgatt taaacaatct tttatctaag cttcctaaca aagctaagga aaatttaaac
     4981 aaagaagatt aaagagcctt tttaaggctc taaattgtag tgatgaaaag tttaatctta
     5041 cctcctaatg aatttttaga tcactatatt ttaaacgctg aatttcatcg ttttgctgga
     5101 atttcaaaaa atgcttataa attttggaaa aatgcagaaa taggtagata tcaaggaaca
     5161 agaattatat ttttgcatag aaattgcatt ttagaaaaac atcagcaagc tttaaggcaa
     5221 tgtagtggtt taaatggttt tgtattggca agtgcttttt gttcttttac tggattagct
     5281 ccctctcatt tagtggaaaa aaataattct tctatttata aacttttaga gcttaaggaa
     5341 atttgtggga ttaaatttgt taatttaaaa aaattttatg attttttagg gctaaattat
     5401 catcagcata tttatataga aaaatgccat ttttttagcc cagctccttt tgaaaagcgt
     5461 attaaaatca ctgagagtat gtgcgttggg tattattaag ataagaaaaa ataaatgcac
     5521 atagcaaagc tataatagcc aaaaagaaaa cataaagtcc caaagaaaaa cgccaaaaat
     5581 tacttaaatt atttaaggca aaactatgca agaaaaaagc aagttgcgga gttaaacctc
     5641 cagctatagc ataagcaata ttatatgaaa aagaaagtcc tgaaaattta atttttgcat
     5701 caaatacttc actcattatt aaagggcaaa aattcatcac tccgctaaaa aaacatacaa
     5761 gtaaatataa gcaagctact aggttaaaat cagcattttg tctatataaa gtattaaaat
     5821 aaagcaagct tgcaattcca aaaaaaacac taaaaaatac acaagattta ataacgccta
     5881 ttttatccgc taaaattcca cttataatac accctaggca aataagcaaa attccaccta
     5941 tttgaagata ggtttgtata gaagtattaa tttgaagtat ttttgccata taactaggca
     6001 taagcaaaat cattacaaca atacaacctg tcaaaaccca agtaatcatc atagaaagaa
     6061 caattcccat tttagctttt ttaaacactt cttttaaagg aaatttttct aaagccttgt
     6121 cttttttcat ttgttcaaaa acaggagttt ctcttaaaaa ttttctcaaa taagcagaaa
     6181 taatcccaaa aattccacct aaaaagaatg gaattctcca agcccattca tgaagttctt
     6241 cttgggtata aattttattc ataattaaaa aaaccaaact acctaataaa attccaccta
     6301 caaccgaagc ggttaaaatt cccaaataag ttcttttttg accttgtggt gcgtgttcgt
     6361 atacaaaaac ccaagctcca gggagttccc cgcctatagc tataccttga caaatgcgta
     6421 taaaaactaa aagcacaata caaagaaaac ctatactttc ataatttgga ataaaagcta
     6481 gagtaaaagt tggaataacc attaacaaaa tactaatcat aaacattctt ttgcgtccaa
     6541 atttatctcc aaaatgtgcc agtatcacac cccctaaagg acgtgctaaa tatccagctg
     6601 caaatattcc ataagtatta aacatttgcc aaaaactact taaatctttt ggaaaaaagt
     6661 ttgttgaaat ataatttgca aaaaatacaa aaataataaa atcataaaat tctaaagttc
     6721 cacctaatga tgaaagtcct aaaactttta tatctttttg gttaagggtt ttgctcattc
     6781 ttaatccatc tcataaaaat catcatcatt gttatcatca tcgtattcat aatcatcatc
     6841 atcgtaatta taatttttat ggtgattttg tggatattct tcatcttcgt tttcataatc
     6901 atcgtaattt aaatcttctt catcttcata agccattgtt ttctccttaa ataaaaatac
     6961 aaagcttatt ttatcttaaa tttgtttggt tttgctataa tttttataat tttttaaaag
     7021 gtgaatttat gaaattaagt catttagatg aaaaaaatca tcctaaaatg gtagatgtaa
     7081 gcgataaaaa tattacttta agaatagcca cagctagtgg tataatatat atgagtcaag
     7141 aagcttttga tgtaattaaa aacaataccg caaaaaaagg tcctgttctt caaacagcta
     7201 ttgttgcggc tataatgggg gttaaaaaaa caagtgaaat tattcctatg tgccatcctt
     7261 tgatgctttc taaagttgaa actaatattg tggaatttgt taaagaatgt gcatttaagc
     7321 ttattgtaac agttaagtgt gaaggtaaaa caggtgttga aatggaagct ttaagtggag
     7381 ttagtatagg acttttaact atatatgata tgatcaaggc tatagataaa tcaatgagaa
     7441 ttacggatat agtgcttgaa agcaaagaag gaggtaaaag tggtaaattt gtgcgatctt
     7501 aaaaaagaac ctcagatcaa ttatcctact ttttgggatt ataaggtgat ttttgaggtg
     7561 catgttaagg caagtgaaat ttttgaagaa attttaggtc aaagagaata taaatttaaa
     7621 cattcgaatt caagtgcgag tggaaaatat caaagttatt tgttaaatgt ttatgttgat
     7681 agcaaaaaag atcgtttgga tatatttgat aaattaaaag ctaaagcaaa atttgtactt
     7741 taagaaagaa ggaaaaatga aaaatacttt aattattttt gaaaattctt tatcaaatct
     7801 cggtaaagat gaagcaagtg atttacttga agacttgagt tttaatcttg cgtataagca
     7861 aatttcacat aatcctcatg aaacaaaaaa agttttaaat tctcttttgg ttgaattttt
     7921 aactattttg aaaaaacttg atttttttga tgatgaaaat gttacaaagg ttatcaaagc
     7981 tttggttaag gcgagtattg tagatgctca aaattcactt tatgagtata ttagcgaagc
     8041 tgaattatta aacaaacaga ttgaaaatca aaagaatttg attaaaaatc aaatcagcga
     8101 taattttttt gaattcgaga atattttaca agaatgttct ttttgtgatg aatttagtgg
     8161 tggtttaaat gatgctattt tatttgatat agaaatgctt ggaattttaa aagaaaccgc
     8221 tgaaagtgct tttttaacta cattagaaaa ggctgaagat atagaactta caagtagtga
     8281 aatagctaaa aatctcgtat ataatgccat ttgtgaagct cattttgaaa aagaaagaat
     8341 tttaaaaatt tcaagtatta ttttaaatac cgcttttgaa atagctaatg aatctatggc
     8401 ttatgcaaaa gatctttgtt taggcgtgat taaaggcaca agggatggta ttgttttggc
     8461 aatggaaaaa tttaaagctt cattaactta tgcaaatttt gaagaagatg ttagtttaaa
     8521 aagcaaagaa ctaataggta tagaagatga ttttattgct cttttaaaaa aagagattca
     8581 attacaaaat gatccttgta agagtatagt tgagaatttg ctagaacatg aacttgataa
     8641 tctttttgct aaatttagac gtcttgcagg tgaaagcaga gagcaactaa tattagtttt
     8701 aaatgatatt aagaaaaatc caaagattaa tgattttaac aaacttactc aaagaaaatt
     8761 aaatcgtttt aaacaagaaa tttttgaatt agaaaaaatt gctagtgaaa aatacaaaga
     8821 tttaaattcc aaaaaagcta aaaagctcgg tgtaagactt tgggaaaaag caaaaaaatt
     8881 cgttaaaaaa taatatccca tttttgggat attaaatatc tatttctata cctacaggtg
     8941 cgtgatcaga gccaaaaata tcatctctta tgaaagcgtt tttaagttta tcttttaaac
     9001 cctttgaaat gaaaaaataa tcaatcctcc agcctacatt tctttctctt gctttcattc
     9061 tatagctcca ccacgagtat ttttctttga tttcgccatt aatttctcta aaagtatcta
     9121 taaaaccaag ctttagcaaa tcatcaatcc aagctctttc tataggtaaa aaacctgaag
     9181 tgttggcatt ggcttttgga tgagtaagat cgatttcttt atgagcggta ttgacatcac
     9241 cgcaaatgat aatttcaaat ccatccttta aaagcttatc caaatacact aaaaaatctg
     9301 cataaaattg catcttaaaa tttaaacgct cttcatcttt ttgaccattt ggaaaataga
     9361 tattaaaaag tgcaatattt ttaaagcggt gttctaaaac cctaccttct tcatcatcaa
     9421 aaaattcgca tttttttact tcgctattaa aattacaaag actcattacc ccagaatacc
     9481 ccgctctttt agcagaatta aaatacatgt gtttaaaagg atattcataa atttttttag
     9541 gaaatttatc ttcatgtgct ttgatttctt gaaaacctat aaaatcaatt tgttcttgtg
     9601 ctatccaatc aagtgcattt ttatcacaaa tagctcttaa gccattgaca ttccatgaaa
     9661 gtagtttcat tattttcctt aaaattttca ttaaaagtgt aaatcataac ataaaaagat
     9721 ttaaaactac aatccattta aaaaaattca ataaaattaa aagcttaaat ttgaaggtgg
     9781 gatttatatg cttagattaa cttggtttca gtttactttt tttaattctt tgatgattgt
     9841 attgttgaat tttaatttat tttattttgt gtatgaaaaa aatacacaaa actggcttat
     9901 aacttttgtt tttattgtgg cctattttgc acttgttcac gtgatttgct ctttgctttt
     9961 tataaagttt tttactaaat ttttttctat attatttata atatcatctt ttttaagtgt
    10021 ttactttatt agtttttatg gggtgcttat agattctgat atgatgcaaa atgttgttca
    10081 aacagacatt aaagaagtaa aagatttgtt aaatttaaaa ttgatcttat ttgttgtttt
    10141 ggctttatta ttggtttttt atgttgttaa agtaaaaatt gattattatg gtagttttaa
    10201 atcccatata aaaattaaaa ttatcaatat aatatcaggt ttgattgttg tttgtgcagt
    10261 tttaatccct ttaagtaaaa ctttcttgcc tttttttaga aactataatg aaataagaat
    10321 gtataatact cctttttatc aaatttatgc cgtatatcgc tattatgttc gttttgtaaa
    10381 agctaagcca gaatttaaaa ctatagctaa tgatgcttat agagaaaaca atcacactaa
    10441 aaaacttttg gttttggtgg tgggtgaaac cgctagagcg gcaaattact ctttgggtgg
    10501 atatactaaa aatgatacca atttttatac caaaaaagat aatgtagtct tttttgataa
    10561 tttttcatca tgtggaacag caacagcggt aagtttgcct tgtatgtttt ctatttctaa
    10621 gcgtgaaaat tattcaagtt cagagtttca agaaaatgcg atggatgtgc tttataaaac
    10681 aggtgtagat gctgtatggt ttgataataa ttctggtggt tgtaaagggg tttgtgatag
    10741 attagcttat aagcaaaagc tttctagtga tttggatgaa aatttactcg ccccttttaa
    10801 agaaaaatta aatcatttaa gtgatcaaaa tataatagtt cttcatttgc aaggttctca
    10861 tgggccaact tattataaac gctatccaag cgaatttaaa aaatttactc caacttgtga
    10921 tactaatgaa ctttcaaaat gtgatagcga ggctttaatc aacacttatg ataatacttt
    10981 gctttataca gactatcttt taagtgagat tataaaacta ttaaaagagc aaaaaagcta
    11041 tgaaagttct ttgttttatc tttcagatca tggtgaaagt ttgggtgaaa atggtattta
    11101 tcttcatggt atgccttatg ctatagcacc aagttatcaa actcatattc ctgctatttt
    11161 ttggagcaat gataaaaatt taatgaattt agctaaagag tataaaggtt taaaactttc
    11221 tcaagataat ctttttagta ctcttttagg atattttgat gtaaaaacaa gtgtttatga
    11281 accagaatat gatttattaa atcctaaact taaggcaaat ccatgaagcc taaatatcat
    11341 tttttaaata acgcaagata tgctttagaa gggctttttg ctttatttaa aaatgaaatg
    11401 gcgtttagaa ttgaactttg cattattatc cccgcgatag tttttagttt tttcttaaaa
    11461 attagttttt tggagcattt gttattgata agtgtcttaa tacttatctt aattgtagaa
    11521 gctttaaatt cggctattga agcttgtgtt gatttgatta caaacgaatg gcatgaaaag
    11581 gcaaaaatct ctaaagattg tgcgagtgcg gcagtgtttt ttagtgtgct tttagctctt
    11641 tttgtttggg gctttatttt atataatatt tacttatgaa atttgaaaat ttaatacgag
    11701 aaattttagg aaaaaagcgt tttgaattgt taaaattttt atgtgaaaat gccgatgaaa
    11761 atggttttat tatgattaaa atcagtgatc ttgaagaaaa attacatcaa agtaaaccta
    11821 ccatcatcgc tacttttaag tttttagaag aaaaaaaact ttttaagcgt cttaaaaatg
    11881 gattttatca gctaaatata ggagataaaa atgaaactta aaaatccttt agatatgcat
    11941 ttgcatttaa gagataacca aatgttagaa cttattgcac ctttgagtgc aagagatttt
    12001 tgtgcagctg tgattatgcc aaatttaatc cctccgcttt gcaatttaga agatctaaaa
    12061 gcttataaaa tgcgtatcct taaggcttgt aaagatgaaa atttcactcc tttaatgaca
    12121 ctttttttta aaaattatga tgagaaattt ctttacagtg ctaaagatga aatttttggc
    12181 attaagcttt atccagcagg aattacaaca aattcaaatg gtggagtttc aagttttgat
    12241 atagagtatt taaaacctac tttagaggct atgagtgatt taaatattcc tttgctagtg
    12301 catggtgaaa ccaatgattt tgtaatggac agggaaagta attttgctaa aatttatgaa
    12361 aaattagcca aacattttcc acgacttaag attgttatgg agcatattac cactaaaact
    12421 ttatgtgaac ttttaaaaga ttatgaaaat ttatacgcga caatcacttt acatcattta
    12481 atcatcactt tagatgatgt tatcggaggt aaaatgaatc ctcatctttt ttgtaagcct
    12541 atagccaagc gttacgaaga taaagaagcc ctttgcgaac ttgcttttag tggttatgaa
    12601 aaagttatgt ttggaagtga tagtgcgcct catccaaaag atactaaaga gtgttgcggt
    12661 tgtgccgcag gtgtatttag tgccccagtg attttacctg ttttagctga attatttaag
    12721 caaaatagct cagaagaaaa tttgcaaaaa tttttaagcg ataatacttg taaaatttat
    12781 gatttaaaat ttaaagaaga taaaatttta actttagaag aaaaagaatg gcaagtacca
    12841 aat
//
LOCUS       DAPIVO010000050        12718 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.050, whole genome shotgun sequence.
ACCESSION   DAPIVO010000050 DAPIVO010000000
VERSION     DAPIVO010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12718)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12718)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12718
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.050"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            111..896
                     /locus_tag="RJ239_001347"
     CDS             111..896
                     /locus_tag="RJ239_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDV7331457.1"
                     /translation="MEITDLPYLIIGIISGIASGLFGIGGGMIIVPSMFALGASAHHA
                     IGISVLQMIFAAVFGSYINYKKKNLNLKDGIMIGFGGLIGASFSGMLLKALSDVALTS
                     VFLAVSCIFFIKYAFGIKENIVQNQRSVWVKNVILFIAGAFTGIFAISLGIGGGLLIA
                     PILAYFLGYDSKKVVSLSLFFVIFASVSGIISFSNSGVIDSEVIHKGILVGIASMVGV
                     FIGIKIIEKMHISAHRKILLCVYALSILGTTHSLLNKLNFINF"
     gene            969..3794
                     /gene="uvrA"
                     /locus_tag="RJ239_001348"
     CDS             969..3794
                     /gene="uvrA"
                     /locus_tag="RJ239_001348"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HDV7331458.1"
                     /translation="MNDTIKIIGARENNLKNIHLEIPKNKLIVFTGLSGSGKSTLAFG
                     TLYAEGQRRYIESLSAYARQFLDKVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTI
                     TEIYDYLRLLYARVGIQHCHRCGQKISSMSVSDIVSEILKFPKGAKIIIYSPLIREKK
                     GTYADLLENLRNKGYVRAQIDGVLVRLDEEIELAKTKKHTIKLVIDRLEIQEDLLSRL
                     ASDIEKGLQESFGEIEIEVLNHEEINLNKHYHFSEHSACFDCKISFVPLEPLSFSFNS
                     PKGACEACDGLGIRYTLDMKKIIDENLSLENGAVKIMYGFNKSYYYKFLIAFCEQNEI
                     PIKIPFMQLNEVQKRLVLYGNAKTIEFLWKRNRLKRTFEGVVKMAYEMLKDEKDLAEY
                     MSEKICKDCGGHRLKPESLAVKVAKKSLGEILDMSIEDSTAFFADEKNFSYLSEQQKL
                     ISKPILKEINERLFFLYDVGLGYLSLGRDARTISGGEAQRIRIASQIGSGLSGVMYVL
                     DEPSIGLHERDTAKLIKTLRNLQQKGNTLIVVEHDKMTIEEADFIVDIGPKAGKFGGE
                     VVFSGTYKELLKSKSETALYMNGKKQISQLQNRTQKEWLELKNVNINNIQDLSVKFPL
                     QNLVAITGVSGSGKSSLILQTLLPFAQEELNRAKKVKKLGGVQIEGLEKLDKVIYLDQ
                     SPIGRTPRSNPATYTGAMDEIRNLFAATKEAKMRGYKAGRFSFNVKGGRCEKCSGDGE
                     IKIEMHFLPDVMVVCDTCGGKRYNDATLEIKYKGKNISEILNMSVLEASEFFTAVPKI
                     KQKLDTLVKVGLDYLTLGQNATTLSGGEAQRIKLAKELSRSDTGKTLYILDEPTTGLH
                     FEDVNKLILVLQHLVDLKNSVFVIEHNLDVIKNADYIIDMGPEGGVKGGKVISTGSVE
                     KVAKEHKKTRSYTGYYLDLELKNTQKS"
     gene            3799..4242
                     /locus_tag="RJ239_001349"
     CDS             3799..4242
                     /locus_tag="RJ239_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDV7331459.1"
                     /translation="MFDFLYNDISYLGLFMVCFLSSTLLPLASEAFVLGFIKLDFNPN
                     LVLIVATLGNTLGSLSTYALAYFGKEKILEKYFSKSLKKLENFNANFAKFGSIFAFFT
                     FLPLVGDLFALGLGFAKYSFLKTIFFILLGKLSRYTFIIFIANSF"
     gene            complement(4198..5205)
                     /locus_tag="RJ239_001350"
     CDS             complement(4198..5205)
                     /locus_tag="RJ239_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HDV7331460.1"
                     /translation="MRLILDTDIGNAIAGANTDDGLALALILSSKEIKLEMLSTVCGN
                     VPSLVAYSVAKDLFQRLNLNIPVYLGANEALKEPSKAWRQRLDESVKNFKLEYLWENI
                     KSPEILENINPDAIFKMGELVSKNPKEISICAIGPLTNIAMTMKIFKDFDINLKELFI
                     MGGSFDMPYYTKDTNFGFDPEAASIVLNSRAKITLIPYNATMQTLLTHEDLKELQGKN
                     ILCDFIVETLGVWIDYASKTRGTKGTWIHDALTIACALDSSIADFDECYADVICDSSL
                     ARGMSWRCFREPKMSMGVDLSTKNCVKILKNVDNARLLKLIKERLLKGVCYENYESIT
                     T"
     gene            complement(5202..6563)
                     /locus_tag="RJ239_001351"
     CDS             complement(5202..6563)
                     /locus_tag="RJ239_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHS family MFS transporter"
                     /protein_id="HDV7331461.1"
                     /translation="MTNQQIDGIADKNFNTPEGRKVFKKAVFSCWLGTAMEYADFALY
                     GLAAATIFSEVFFPEQTPVIALLLSFVTYGIGFIARPIGALFFGHLGDKHGRKNVMMA
                     TIALMGISTTLIGFIPSYAVIGVWAPICLVALRFMQGFGAGAELSGGTVMLAEYAPSK
                     RRGLVSSVIALGSNSGTLLASFVWLLMVQMDEASFKEWGWRVPFMGSILIALFAVYIR
                     FHVKETPVFEKQKNEMMKLRLNNEKHMKKDERSFWQRSRAFWTMVGLRIGENGPSYLA
                     QGFIVGYVTKILLLDKSVATTAVMIASLVGFLVIPLAGYLSDKFGRCITYRMFCLLLM
                     IYAFPAFMLLDSKNEIIVILTIIVGMSLASLGIFGVQAAWGVELFGVKNRYTKMAFAK
                     ELGSILSGGTAPMVASALLAYYGSWWPIATYFVLTAGIGFVTTFFAPETRGRDLNKIE
                     DAI"
     gene            6727..9366
                     /gene="polA"
                     /locus_tag="RJ239_001352"
     CDS             6727..9366
                     /gene="polA"
                     /locus_tag="RJ239_001352"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HDV7331462.1"
                     /translation="MKTLTIVDTFGFFFRLYYALKGFKNSQGQASGMISGFANFIYSL
                     KNEYKSDYIVFALDSKGKTFRSEIDPNYKQNRTPPPPELLEQIPICIKMIEKMGFISV
                     SQEGYEADDIIASFVKTCENRDIFVRIITQDKDLYQLIKDGKTSIYSPISKNDYDEAA
                     CLEKYGVKPNQIRDFLALCGDSSDNIPGVKGIGAKGAKTLLDEFGSIEGIYENLTLVR
                     NERSRNLLLEGKENAFLSKKLASLYDNLEVQNLIEKATYPDEEPLLKILEILEHYELN
                     TLLKKLRQNPDNKDKNLGFKATLVQDENKLFEILNTLDKESIIAFDTETTGLDTKEAK
                     IVGFSFCMNENEAFYVPLTHNYLGVGEQISLQSAKKAIEVIFNHFVIGHNLKYDFKII
                     QNNFDLNLPQKYADTMILAWLKNPSLRVNMDDLALRLFNYETLHFESLVKKGENFASV
                     ELEKACKYAAEDAYITLRFYLYFLKNLETPLLELAKNCEFDFIKIIMMMEENGIKLDT
                     NALEILMKKFENEIKNLSEEIYTLCEDRFNLNSPKQMGDILFEKLKLPSGKKGKTGYS
                     TDEKVLNILLDKHPVIAKILDYRELAKLYSTYCEPLLKLALKDKNSRIYSSFLQTGTA
                     TGRLSSKDPNLQNIPAHGQYAKDYKSCFVAKDGFSFISLDYSQIELRILAHFSEDEKL
                     LNAFANDEDIHARTAIMIFGESNYETRSVAKSINFGLIYGMGYKTLSQNLKIEANLAK
                     SYIEKYFENFTSIKKYFEKVKNEAKQNGFIVTLSGRKRYFDFENAKPMQIAMYERESI
                     NSILQGSAADVIKLAMLEINKELNEDKKLILQIHDELIFEVKDDLCENFVKKTRDIME
                     NIVKLKVKLKTSSSIAKNWGDLK"
     gene            9382..10158
                     /gene="motA"
                     /locus_tag="RJ239_001353"
     CDS             9382..10158
                     /gene="motA"
                     /locus_tag="RJ239_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HDV7331463.1"
                     /translation="MDLSTILGMVLAVTSISVGDILEGGNPLHVVHLSSFLIVMPTAA
                     FCAMTSTHKKIVKAAYKELKVVFKGSGVNLPERIAQLIEFAIIARRDGLLALESRTSE
                     IENEFLKNAMMMLVDGKSFEEIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVG
                     AVFGLILALKLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGKKLKANGMDLVKEQ
                     IVITEAIKGIAEGANPRDLEAKLFNFLSHDDPRISQFDKG"
     gene            10161..10904
                     /gene="motB"
                     /locus_tag="RJ239_001354"
     CDS             10161..10904
                     /gene="motB"
                     /locus_tag="RJ239_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HDV7331464.1"
                     /translation="MAKKHKCPECPAGEKWAVPYADFLSLLLALFIALWAISKTNPAK
                     VEALKTEFVKIFDYTSTQTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRL
                     QAALDQSDNQVALNLPSKVEFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGY
                     TDNSDSIIRSYELAYQRAENVLKYFIEGGANLKNISIKSYGLNNPINGNPQTLENNRV
                     EIYFKVDTADTSTQKSVLELINKIGTKAP"
     gene            complement(10910..11998)
                     /gene="flhB"
                     /locus_tag="RJ239_001355"
     CDS             complement(10910..11998)
                     /gene="flhB"
                     /locus_tag="RJ239_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhB"
                     /protein_id="HDV7331465.1"
                     /translation="MAGEDQEKTEEPTSKKIEDARKEGNVPKSQDAAAIVTLIIGVTI
                     TLFMMSFMGERIVNLYRYYQSFIGVEFDLRIIQAIMIKSIFEVLIILAPIVLSIMIAG
                     VLGNIMQFGFIFTTKPIMPNLGKINPLKGLKNLFSLKKIVESIKIILKVGIVFTIAFI
                     VLLKFMQELPRVELYTMVAQLTWLRDRAIVLAAIVIVAFLIIAVLDVFLVRFQYFKGL
                     RMSKQEIKDEYKQMEGDPQVKGRIRRLQMEAARRRMVQDVAGADVVITNPTHYAVAIR
                     YDTGKEQAPRVVAKGVDFLALRIKQVAYENNVVVYENPPLARELYKACDVNDLIPREM
                     FKAVAEVLGFVYNTNNKSRLAGQVKKGN"
     gene            complement(12117..12713)
                     /locus_tag="RJ239_001356"
     CDS             complement(12117..12713)
                     /locus_tag="RJ239_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HDV7331466.1"
                     /translation="MIVTKKALDFTAPAVLGNNEIVQDFNLYKNIGPKGAVVFFYPKD
                     FTFVCPSEIIAFDKRYQEFKNRGIEVIGISGDNEFSHFAWKNTPVNQGGIGQVKFPLV
                     ADLTKQIARNFDVLYAEAVALRGSFLLDADGTVRHAVVNDLPLGRNIDEMLRMVDTML
                     FTNEHGEVCPAGWNKGDEGMKANPKGVAEYLGKNEAKL"
BASE COUNT         4597 a         2099 c         2010 g         4012 t
ORIGIN      
        1 taaagttacc aaaaaatatt ctattgttat aaaaaaacta agataatact tagcttaata
       61 agataaaatt attccgtatt tgaaatattt aatatttttt aggaaaagct atggaaatca
      121 cagatttacc ttatctaatc ataggaatca tttcaggtat tgcttctgga ctttttggca
      181 ttggtggagg tatgattatc gttccttcta tgttcgcact tggagcaagt gctcaccatg
      241 ctatcggaat ttcagtattg caaatgattt ttgcagcagt ttttggctct tatattaatt
      301 ataagaaaaa aaatctaaat cttaaagatg gtattatgat aggttttgga gggctcatag
      361 gagcaagctt tagcggaatg cttttaaaag ctttaagtga tgtagctctt actagcgtat
      421 ttttggcggt aagttgtata ttttttatca aatatgcttt tggaattaaa gaaaacattg
      481 tgcaaaatca aagaagcgtt tgggtaaaga atgtcatttt atttattgct ggagctttta
      541 ctggtatttt tgctatttct ttgggaattg gtggcggact tttaattgct ccgattttag
      601 cttatttttt aggctatgat agtaaaaaag ttgtttcctt atccttgttt tttgttattt
      661 ttgcttcagt ctctggtatt atatcttttt caaattctgg agttatagac tctgaagtta
      721 ttcataaagg aatactagta ggtatagctt ctatggttgg agtttttata ggaattaaaa
      781 tcatagaaaa aatgcatatt tcagctcata gaaaaatttt actttgcgta tatgccttat
      841 caatacttgg aaccacccac tctttgctta ataagctaaa ttttataaat ttttaacttg
      901 gatttatcca agttctttta atattattat gctaaaatct taaatttatt taatgtttag
      961 gaaagactat gaacgatacc ataaaaatca ttggcgcaag agaaaataac ctaaaaaata
     1021 tccaccttga aattcccaaa aacaaactca ttgtttttac aggactgagc ggaagtggaa
     1081 aatcaaccct tgcttttgga actctttatg ctgaaggaca acgccgttat atagaaagtt
     1141 taagtgctta cgccagacaa tttttagata aggtaggcaa acctgatgtc gataaaatcg
     1201 aaggtttaac tccagccatt gccatagatc aaaaaactac ttctaaaaat ccacgctcta
     1261 ctgtaggaac catcactgaa atttatgatt atctaagact tttatacgca agagttggca
     1321 ttcaacattg tcatcgatgt ggacaaaaaa tttcatctat gagtgtaagt gatatagtca
     1381 gtgaaatttt aaaatttcca aaaggtgcaa aaatcatcat ctactcccca ctcatacgag
     1441 aaaaaaaagg aacttatgca gatttgcttg aaaatttacg caacaaaggc tatgtaagag
     1501 ctcaaattga tggagttttg gtaagacttg atgaagaaat tgaactagcc aaaaccaaaa
     1561 aacacaccat taaacttgtc atagatagac ttgaaattca agaagattta ctttctcgtc
     1621 ttgcaagcga tatagaaaaa ggtttacagg aaagctttgg agaaatagaa atagaagttt
     1681 taaatcatga ggaaataaac cttaataaac actatcattt tagcgagcat tcagcttgtt
     1741 ttgattgtaa aatttccttt gttccacttg agcctttaag cttttctttt aattctccaa
     1801 aaggagcatg tgaagcttgc gatggacttg gaattcgtta tactttagat atgaaaaaaa
     1861 tcatcgatga aaatttaagt ctcgaaaacg gtgctgttaa aatcatgtat ggttttaata
     1921 aaagttatta ttataaattc ctaatcgcct tttgcgaaca aaatgaaatt cctatcaaaa
     1981 taccttttat gcaattaaac gaagtacaaa aacgtcttgt attgtatggt aatgccaaaa
     2041 ctatagaatt tctttggaaa agaaatcgcc taaaacgcac ttttgaaggc gtggttaaaa
     2101 tggcttatga aatgctaaaa gatgaaaaag atttagccga atatatgagt gaaaaaattt
     2161 gtaaagactg cggtgggcat cgtttaaaac ctgaaagttt agccgtgaaa gtagcaaaaa
     2221 aaagcttggg tgaaatttta gatatgagca tagaagatag tacggccttt tttgcagatg
     2281 agaaaaattt ttcttattta agcgagcaac aaaaacttat ttctaaacct atcctaaaag
     2341 aaatcaacga aagattgttt ttcttgtatg atgtggggct aggttatctt tctttagggc
     2401 gcgatgcaag aacgattagt gggggtgaag cacaaagaat ccgcatagct tcacaaattg
     2461 gcagtggttt aagcggagtg atgtatgtct tagatgagcc tagcatagga cttcatgaaa
     2521 gagatactgc aaaactgatt aaaactttaa gaaatttaca acaaaagggc aataccctaa
     2581 ttgtcgtaga gcatgataaa atgaccatag aagaagcaga ttttattgta gatattggtc
     2641 caaaagcagg aaaatttggg ggtgaggttg tatttagtgg aacttataaa gaacttttaa
     2701 aaagcaaaag cgaaactgca ctttatatga atggtaaaaa acaaatttca caacttcaaa
     2761 acagaacaca gaaagaatgg cttgagctta aaaatgtaaa tattaacaat atccaagatt
     2821 taagcgtaaa atttcctttg caaaatttag tcgctataac aggagtttca ggttctggaa
     2881 aaagctcttt gatacttcaa accctacttc cttttgcaca agaggaatta aaccgtgcga
     2941 aaaaagttaa aaaacttggc ggagtacaaa tagaaggact tgaaaaactt gataaagtca
     3001 tttatcttga tcaaagccca attgggcgca caccacgttc aaatcctgcc acctatacag
     3061 gtgctatgga tgaaatcaga aatctttttg ccgccactaa agaagccaaa atgcgtggtt
     3121 ataaagccgg acgcttttct tttaatgtca agggtggaag atgtgagaaa tgtagcggag
     3181 atggagaaat caaaatagaa atgcattttt tacctgatgt tatggtagtt tgtgatactt
     3241 gcgggggcaa acgctacaat gatgccacgc tagaaatcaa atataaaggc aaaaatatca
     3301 gtgaaatttt aaatatgagt gttttagaag cgagtgaatt ttttacagcc gttcctaaaa
     3361 tcaaacaaaa attagatact ctagtaaaag tgggtttaga ttatctaact ctaggacaaa
     3421 atgccaccac cttaagtgga ggtgaagcac aaagaatcaa acttgctaaa gaactaagcc
     3481 gtagcgatac aggaaaaacg ctttatatac ttgatgaacc tacaacagga ctgcattttg
     3541 aagatgtcaa taaactcatc ttagttttac aacatttggt tgatcttaaa aattctgttt
     3601 ttgtgataga acataattta gatgtgatta aaaatgctga ttatatcatc gatatggggc
     3661 ctgaaggcgg agttaaaggt ggaaaagtta taagcacagg aagcgtggaa aaagtcgcta
     3721 aagaacacaa aaaaacccgt tcttacacag gatattatct agacttagag cttaaaaata
     3781 cacaaaaatc ataattttat gtttgatttt ttatataatg atattagcta tttggggctt
     3841 ttcatggtgt gttttctttc aagcacacta ttacccttag caagtgaagc ctttgtttta
     3901 ggctttataa aacttgattt taatccgaat ttggtactta tcgtagccac tttgggtaat
     3961 accttaggaa gtttaagtac ttatgcttta gcgtattttg gaaaagaaaa aattttagaa
     4021 aaatacttta gcaaatcctt gaaaaaatta gaaaatttca atgctaattt tgctaaattt
     4081 ggaagtatat ttgctttttt tactttttta cctttagtgg gagatctttt tgccttggga
     4141 cttggttttg cgaaatattc ttttttaaaa actatatttt ttatcttact tggaaaatta
     4201 agtcgttata ctttcataat tttcatagca aactcctttt aaaagcctct cttttataag
     4261 ttttaaaagc cttgcattat ctacattttt taaaatttta acacaatttt tagtgcttaa
     4321 atccaccccc atactcattt ttggttctct aaaacaacgc caactcatac ctcttgccaa
     4381 agaactatcg caaataacat cagcataaca ctcatcaaaa tctgcaatac tagaatctaa
     4441 tgcgcaagct atcgttaaag catcatgtat ccaagttccc tttgtaccac gtgttttaga
     4501 ggcataatca atccaaacac ctaaagtttc aacgataaaa tcacataaaa tattcttacc
     4561 ttgcaactct tttaaatcct cgtgtgttaa taaagtctgc atggttgcat tataaggtat
     4621 gagtgtaatt ttagctcttg aatttagcac tatactagcc gcctcaggat caaaaccaaa
     4681 atttgtatct ttagtgtaat aaggcatatc aaaactgccg cccataataa aaagctcttt
     4741 aagatttata tcaaaatctt taaaaatttt catagtcata gcgatatttg tcaaaggtcc
     4801 tatcgcacaa atagaaattt ctttaggatt tttactcacc aactcaccca ttttaaaaat
     4861 cgcatcagga tttatatttt ctaaaatttc aggacttttt atattttccc aaagatattc
     4921 aagtttaaaa tttttaacac tttcatcaag tctttgacgc caagctttac ttggttcttt
     4981 tagggcttca ttcgctccca aataaacggg gatatttaaa tttaaacgtt gaaataaatc
     5041 cttagccaca ctataggcaa caaggcttgg aacattaccg caaactgtgc ttagcatttc
     5101 aagtttgatt tctttagatg acaaaatcaa agcaagtgct aaaccatcat cagtatttgc
     5161 tcctgcaata gcattgccta tgtccgtgtc taagataagt ctcatatcgc atcttctatt
     5221 ttatttaaat ctctacctct agtttctggc gcaaaaaatg tagtcacaaa acctatacct
     5281 gcagttaata caaaatatgt cgcgataggc caccaagagc cataatatgc aagcaaagca
     5341 gaagccacca taggcgctgt tcctcctgaa agaatagaac ctagctcctt agcaaaagcc
     5401 atttttgtat aacggttttt taccccaaaa agctccacac cccaagccgc ttgcacacca
     5461 aaaatcccta aagatgctaa agacatacct acaataatag ttaaaatcac aataatttca
     5521 tttttactat ctaaaagcat aaaagcagga aaagcataaa tcattaaaag caaacaaaac
     5581 attctataag taatacatct tccaaattta tcacttaaat aacccgccaa aggaataact
     5641 aaaaacccta ccaatgaagc tatcattacc gctgtagtag ctactgattt gtctaaaagt
     5701 aaaattttag tcacataacc tacaataaaa ccttgcgcaa gataagaagg tccattttcg
     5761 cctattctta agcccaccat agtccaaaaa gcacgacttc tttgccaaaa acttctttca
     5821 tcttttttca tatgcttttc gttattaaga cgcaatttca tcatttcatt tttttgcttt
     5881 tcaaaaacag gggtttcttt gacatgaaaa cgaatatata cagcaaaaag agcgattaaa
     5941 atacttccca taaaaggaac tctccagccc cattctttaa aacttgcttc atccatttgt
     6001 accatcaaaa gccatacaaa agacgcaagc aaagttccac tatttgatcc taaagcaatc
     6061 acagaagaaa caagccctct tctcttgcta ggagcatatt ctgctagcat aactgttcca
     6121 cctgaaagtt cagctcctgc gccaaaaccc tgcataaaac gtaatgcaac caaacaaata
     6181 ggcgcccaaa caccaatcac tgcataactt gggataaaac ctatcagagt agttgaaatt
     6241 cccattaaag ctattgtagc catcataaca ttttttcttc cgtgtttatc acctaaatga
     6301 ccaaaaaaca aagccccaat aggtcttgca ataaaaccta tgccataagt tacaaaacta
     6361 agcaaaagtg caattactgg agtttgctca ggaaaaaata cttctgaaaa aattgttgca
     6421 gctgctaaac cataaagtgc aaaatctgca tattccatag cagttcccaa ccagcaagaa
     6481 aaaactgcct ttttaaaaac ttttctacct tcaggtgtgt taaaattctt atctgcaatt
     6541 ccatcaattt gctgatttgt cattacattt tccttacatt attcatataa aatttttact
     6601 ctactcgata ttatgactaa aaattgaagt attttcgctt aaatatcttt aaatttcgag
     6661 acattttaag caaaattttg aaataatata accaaaaaat atattttatc aaaagaagaa
     6721 attattatga aaactttaac tattgttgat acttttggat tttttttcag actttactac
     6781 gcattaaaag gttttaaaaa ttcacaagga caagctagtg gaatgattag cggttttgca
     6841 aattttattt atagcttaaa aaatgaatat aaaagtgatt atattgtttt tgcattagat
     6901 tccaaaggaa aaacttttcg tagcgaaatt gatccaaact ataaacaaaa tcgcactcca
     6961 ccgccacctg aacttctaga acaaattcca atttgcataa agatgataga aaaaatgggt
     7021 ttcataagcg tttctcaaga aggttatgaa gctgatgata tcattgcttc ttttgtaaaa
     7081 acttgtgaaa atagagatat ttttgtacgt attatcactc aagataaaga tctttatcaa
     7141 ctcataaaag atggtaaaac aagcatttac agtcctattt ctaaaaacga ctatgatgaa
     7201 gcagcgtgtt tagaaaaata cggagtaaaa cctaatcaaa tcagagattt tttagctctt
     7261 tgtggggata gttctgataa tattccaggc gttaaaggta taggtgcaaa aggagctaaa
     7321 accttgcttg atgagtttgg tagcatagag ggaatttatg aaaatttaac cctagtacgt
     7381 aacgaaagaa gtcgtaactt gcttttagag ggtaaggaaa atgcattttt aagcaaaaaa
     7441 ttagcttctt tgtatgacaa tttagaagta caaaatctca tagaaaaagc cacttatcct
     7501 gatgaagaac ctcttttaaa aatacttgaa attttagaac attacgaact taatactttg
     7561 cttaaaaaac tgcgtcaaaa tcctgataat aaagataaaa atttaggttt taaagccact
     7621 ttagtacaag atgaaaacaa actttttgaa attttaaata cccttgataa agaaagtatt
     7681 attgcttttg ataccgaaac cacaggactt gatactaaag aagcaaaaat tgttggtttt
     7741 agtttttgca tgaatgaaaa tgaagccttt tacgtgcctt taactcataa ttatcttgga
     7801 gtaggtgagc aaatctcatt gcaaagtgcc aaaaaagcta tagaagtaat ctttaatcat
     7861 tttgttatag ggcacaatct caaatatgat tttaaaatca ttcaaaacaa ttttgactta
     7921 aatttacctc aaaaatacgc agatacaatg attttggcat ggcttaaaaa tccttcttta
     7981 agagtaaata tggatgattt agccttaaga ctttttaatt acgaaacctt gcattttgaa
     8041 agccttgtta aaaaaggaga aaattttgca agtgtagaac ttgaaaaagc ttgtaaatac
     8101 gctgcagaag atgcttatat cactttaaga ttttatcttt attttttaaa aaatcttgaa
     8161 actcctttat tagaacttgc taaaaactgc gaatttgatt tcattaaaat cattatgatg
     8221 atggaagaaa atggcataaa gcttgataca aatgcacttg aaatccttat gaaaaaattt
     8281 gaaaatgaaa tcaaaaattt aagtgaagaa atttatactc tttgcgagga tagatttaat
     8341 ctaaattcac ctaaacaaat gggtgatata ctttttgaaa aactcaaact cccaagcgga
     8401 aaaaaaggaa aaacaggata ttctaccgat gaaaaagttt taaatatact tttagataaa
     8461 catcctgtaa ttgctaaaat tttagattat agagaacttg ccaaacttta ttccacttat
     8521 tgcgaacctt tgttaaaact agcgttaaaa gataaaaatt cacgcattta ttcaagtttt
     8581 ttacaaactg gaaccgctac aggacgtctt tcatctaagg atccaaattt gcaaaacatc
     8641 cctgcacacg gacaatatgc aaaagattat aaatcttgct ttgtagctaa agatggattt
     8701 agttttatct ctcttgatta ttctcaaatc gaacttagaa tacttgcaca ttttagcgaa
     8761 gatgaaaaac ttttaaatgc ttttgccaat gatgaagata tacacgcaag aacagcaata
     8821 atgatttttg gtgaaagcaa ttatgaaacc agaagtgttg caaaaagtat aaattttgga
     8881 cttatttatg gtatgggtta taaaacctta agtcaaaatt taaaaataga agctaattta
     8941 gccaaatctt acatagaaaa atattttgaa aattttacta gcattaagaa atattttgaa
     9001 aaagttaaaa acgaagctaa acaaaatggt tttattgtta ctttaagcgg tcgcaagcgt
     9061 tattttgatt ttgaaaacgc aaaacctatg caaattgcca tgtatgaaag agaaagcatt
     9121 aattcaatct tgcaaggctc agcagcagat gtaatcaagc ttgcaatgct agaaatcaat
     9181 aaagaattaa atgaagataa aaagcttatt ttacaaattc atgatgaatt aatttttgaa
     9241 gtaaaagacg atttgtgtga aaattttgta aaaaaaacta gagatattat ggaaaatata
     9301 gtaaaattaa aagtaaaatt aaaaacaagt tcaagtatcg ccaaaaattg gggcgattta
     9361 aaataatcaa ggagataatt aatggatctt tcaaccatat taggaatggt gcttgcagtt
     9421 actagtattt cggtaggaga tatactagag ggaggcaatc ctttgcatgt tgtgcatctt
     9481 tcttcctttc tcatagttat gccaacagct gcattttgcg caatgacttc tacgcataaa
     9541 aaaattgtaa aagcggccta caaagaactc aaagttgttt ttaaaggttc tggagtaaat
     9601 ttacccgaaa ggatagccca gttaatagaa tttgctatta ttgcaagacg agatggtctt
     9661 ttagcgttag aatcaagaac cagtgagatt gaaaatgaat ttttaaaaaa tgctatgatg
     9721 atgcttgtag atggtaaaag ctttgaagaa attcacgaaa gcatggaaat acaaaccgaa
     9781 caacttgaag agcattataa agaatgcgca gaatattgga tagtatttgg agaaacttgc
     9841 cctaccatgg ggcttgttgg agcggttttt ggtcttattc tagctcttaa attgctagac
     9901 aatcctcaag caatggcagc gggtatttca ggtgctttca cagctacagt tacgggaatt
     9961 tttggcgctt atgcactttt tgctccttgg gggaaaaaat taaaagctaa tggaatggat
    10021 cttgtaaaag agcaaattgt tattactgaa gctataaaag gaattgcaga aggtgctaat
    10081 cctagagatt tagaagctaa actttttaac ttcttaagtc acgatgatcc aagaatttca
    10141 caatttgaca aaggttaaaa atggctaaaa aacataaatg cccagaatgt ccagcaggtg
    10201 aaaaatgggc tgtgccttat gcagactttc taagtttgct tttggcactt tttattgctc
    10261 tttgggcaat ttctaaaaca aaccctgcta aagtagaggc tttaaaaact gaatttgtta
    10321 aaatctttga ttacacctct actcaaacag tcaaagaaga gagtaaaacc caagaaaaat
    10381 ataaaggcgc agcaaaagaa gaaagcgatg aactcaaatc gttaaaacaa atgactatga
    10441 cacagcaaga aactatcaaa cgtcttcaag cagctctaga tcaaagcgat aatcaggttg
    10501 ctcttaacct tccatctaaa gttgaatttg aaagaggtag tgctcaaatc gtttcagctg
    10561 atatacaaga ttatttaaaa cgtatggctg agctaacaac atatttgcca cctcaagcaa
    10621 aaatagaaat tagaggctat acagacaata gcgactctat tataagaagt tatgaactcg
    10681 cctaccaaag agcggaaaat gtattaaaat attttataga aggtggagca aatttgaaaa
    10741 atattagcat taaaagctac gggcttaata atcctatcaa tggaaatcca caaactctag
    10801 aaaataatag agtagaaata tattttaaag tcgatacagc agatacaagt actcaaaaat
    10861 cggttcttga gcttattaac aaaataggaa ctaaagcacc ttaaaagttt tagtttcctt
    10921 tttttacttg accagctaaa cgactcttat tatttgtatt ataaacaaat cctagcacct
    10981 cagctacagc tttaaacatt tccctaggaa taagatcatt aacatcacaa gctttataaa
    11041 gctctcttgc taaaggagga ttttcataaa ctacaacatt attttcatag gctacttgtt
    11101 ttatgcgaag agcgagaaaa tccactcctt tggcaacaac cctaggggct tgttctttac
    11161 ctgtatcata acgaatagct acggcataat gcgttgggtt tgtgatcacc acatccgcac
    11221 ctgcaacatc ttgaaccata cgacgacgcg cagcttccat ttgaagtcta cgaattctac
    11281 ctttaacctg aggatctcct tccatttgtt tatactcatc ttttatttct tgtttgctca
    11341 tacgcaaacc tttaaaatac tgaaaacgca ccaaaaaaac atctaaaaca gcaataatta
    11401 aaaaagcaac tataacaata gctgctaaaa caatagctct gtctcttagc caagtaagct
    11461 gtgcaaccat agtataaagc tcaactcttg gaagctcttg cataaattta agtaaaacta
    11521 taaaagctat agtaaaaaca atacccactt ttaaaataat ttttatactt tcaacaattt
    11581 ttttcaatga aaaaaggttt tttaaacctt ttagaggatt gatttttcct aaatttggca
    11641 taataggttt agttgtaaaa ataaaaccaa attgcataat atttcccaaa accccagcaa
    11701 tcataatact taaaacaata ggtgcaagaa taattaaaac ctcaaaaatg cttttaatca
    11761 taatggcttg aataatacgc aaatcaaatt caacaccaat aaaactttga tagtatctat
    11821 ataaatttac aattctctcg cccataaaac tcatcataaa taaagttata gttactccaa
    11881 ttatcaaagt tacaatagct gccgcatctt gagactttgg aacattacct tctttacgcg
    11941 catcttctat ctttttggac gtgggttctt ctgttttttc ttgatcttcg cctgccatat
    12001 tttagcctaa ataaaaattt taatatgtgt gtaaaattat agtagaaaat ttatgaattt
    12061 caattaaaga ataaaaatga agaaaaagcc tcgtaaagag gctttatact aagaaattaa
    12121 agtttagctt cgtttttgcc aagatattca gccacgcctt tagggttagc tttcatacct
    12181 tcatcgccct tattccatcc tgcaggacaa acttcaccat gctcatttgt aaaaagcata
    12241 gtatcaacca ttcttaacat ttcatctata tttctaccta gtggtaaatc attaaccaca
    12301 gcatggcgaa ctgttccatc agcatcaagc aagaacgaac cacgaagggc aactgcttct
    12361 gcataaagta catcaaaatt tctagcaatc tgcttagtta aatcagcaac aagtgggaat
    12421 ttaacctgac caataccacc ttgatttact ggagtatttt tccaagcaaa atgtgaaaat
    12481 tcattatctc ctgaaattcc aattacttca ataccgcggt ttttaaattc ttgatatctt
    12541 ttgtcaaaag ctataatttc tgaaggacaa acaaaagtaa aatcttttgg ataaaagaat
    12601 actaccgctc cttttggacc tatgttttta taaagattaa aatcttgaac aatttcattg
    12661 tttcctaata ccgctggagc agtaaaatct aaagcttttt tagtaactat catatttt
//
LOCUS       DAPIVO010000051        12338 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.051, whole genome shotgun sequence.
ACCESSION   DAPIVO010000051 DAPIVO010000000
VERSION     DAPIVO010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12338
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.051"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..846
                     /locus_tag="RJ239_001357"
     CDS             <1..846
                     /locus_tag="RJ239_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S cluster-binding domain-containing
                     protein"
                     /protein_id="HDV7331467.1"
                     /translation="LSQLKKEHYKVLDFHLRKITPQAFLEIVEIHLAESCNLNCFGCN
                     HFSQIAEKEFPDIEIFKKDMQRLSEISKGIVGTFRLMGGEPLLNPNCIQFFDITRYFF
                     PKSAIWLVTNGILLDKQNEDFWNSCQRNKMQIRPTKYPIKINWDLIKDKCDQYDIPLI
                     FFNNGELEKTSWKFSLDPSGNCDNYHSFTNCSMANHCVQFKDGKLFTCTFPAHVQHFN
                     KKYGNHFEVCEFDFIDIYKAKDYQEILFFLSKPIPFCRYCKVSQWAEIGKWRSSNKTK
                     HEYLI"
     gene            856..3951
                     /locus_tag="RJ239_001358"
     CDS             856..3951
                     /locus_tag="RJ239_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HDV7331468.1"
                     /translation="MIKKILLITPELEYTGALNSFKRICEVLLNNKYAVDIWTYNEGP
                     YISEFDKLGVYVEVISEDDIDSKWVHERISKYSLVIANTIVVYKCVELIQNLTPVVWY
                     IREAENLPDFFWKPERKLALEKAKKLYVVSEYAKDFIIHNYNKNVEVLHNYVDDVFYE
                     KHDDFLKQIKSDKLKFLALGTIEKRKGYDVLLQAFIDLPVDIRDQCELHFAGRFWEGA
                     KDFFPKILSLAKKFPNIFYHGELRDRKKIHSLIFQCNVMVVPSRDESCSLVALEGAMM
                     SKPLILTENIGAKYILDENSGWLVKTGSVDSLKNAFIQAYKNKNKLDAMGANSRNNYL
                     QTSTYEIYEKNILKMVRDEICKNQYLYRINQENYVLFSFDIFDTLISRNIAKPSAVFL
                     IMKQKMRNMDFPLNLVKNFDRIRVEVEQYYYRNVCKNKYEDTNFDEIYNLLQQNFSLS
                     FQQKEELMKLEINTEKETLYPIKKNIELVEELIKNEKRVVLISDMYFSSSIIRTFLNK
                     FSPIFNNIPIYMSSEFRLKKNSGNLFKAILNLEKVDPKKWIHCGDNWVGDYLKPSNLE
                     ISTNFYINQLLPYEEFALNRNSLDMDLQKIIGISKKIRLENTLTNLQEIGVSFGAPML
                     LPYVQWILNIALKNSIRCLYFIARDGYVLQKMTDMLIQAKKINIKTKYLYGSRESWRE
                     PFRNKDKLKIQLIDEYLDQEIDKQEIFAFVECCGTGETLDYIVKRIESNQQFKNMFFG
                     SLYLYRSKLNKTKTQSLFMLPLNENYTYGIELFVRSLQGQVLGYDKKDGRVIPVFDFL
                     EGEALQKFRYDEYIDGVMLFMEYIVKTDNYEKIFDNMNVTILYLNYLSNNYIDKKFIE
                     IMGNVPFILNGVKDRVGIFAPRLNNKITLDQKNSFFNWSVLRSCKDIRVKYNMDNDCY
                     FGLIGAVDIIKSHLSYKLGKVILLNIKNPLKWIKLIVLIPILIFSHHEQKKIYLTEKK
                     INIDLSFYKDYNEAIMVRNFFSYQLGELILKTSRKWNVLAIVILPYKIAQLYRKKFKK
                     G"
     gene            3954..5702
                     /locus_tag="RJ239_001359"
     CDS             3954..5702
                     /locus_tag="RJ239_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein CapA"
                     /protein_id="HDV7331469.1"
                     /translation="MDNSKPLIIAGRDDGFGERMRALLNALYISKKFGFKFGFVWRDI
                     NNIQNLLDGKVLIPWANLPTREYLFDQDFIKSYYRQDIEFAYETPVLWSLYRQSIKNI
                     LKKPYEKEWGWYSTQGDLSEYFTDVDEGEYRTELVSCWKQIDFSSHVKKIFEKAHSKF
                     LDIGKFVAIHIRTGEVIHDEFYRNILYHCRYKIFPYPFALEIALKEIKKGHRVIFFGD
                     DLNLIQNLKEYCSFNKQAQENIFSIDDIIAFEQLDNGYDRLLFELVLMSKSEYIFGSG
                     TTGFSRCASWIENKIFINIFDHLSLIEQYEIILKYIDIENIDDLYRSCNYFFLFLLSE
                     QLNLNFDIKLRYLSKSLRYDSGSLNSEVFYINLLLQNEKFKEADDRLEQVICKNKKKF
                     FDLLLGYGQNPTFPYDIYMNYYFKDFDQYSNIFYVACRIFSEFNIPESRVNTYYPNFH
                     PIIFDQFKMFIFKDLPKSDQEIGAVKKIRNHLAYKLGVAAIKNSKSLWGYIRMPYVLS
                     YIRDMHKESQNKMDKKSISLEYYSDYESALKEKEGFVYKLGQIIIKAHKNWHKGGYIM
                     LWFEVKKLKKEFKKGK"
     gene            5702..6247
                     /locus_tag="RJ239_001360"
     CDS             5702..6247
                     /locus_tag="RJ239_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase family
                     protein"
                     /protein_id="HDV7331470.1"
                     /translation="MAIEFDIQESKILKGVYIITPNKFRDLRGEIWTAFTDEYLSKLV
                     PDGIKFKHDKFINSHFNVLRGIHGDVKTYKLVTCVYGEVHQVVVDCRKDSPTYLKWEK
                     FIISYKNQQLILLPPNMGNSHYVSSKEAVYYYKLAYEGEYMDAPDQFTYAWNDERIGI
                     DWPTNTPILSDRDILATKNKG"
     gene            6251..7178
                     /locus_tag="RJ239_001361"
                     /pseudo
     CDS             6251..7178
                     /locus_tag="RJ239_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344812.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            7178..8218
                     /locus_tag="RJ239_001362"
     CDS             7178..8218
                     /locus_tag="RJ239_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HDV7331471.1"
                     /translation="MQTNSKIYIAGHKGTAGTALVENLQKRGFNNLVLKTRQELDLVN
                     QQAVAKFFKEEKPEYVFLTAVLPCGAANVAQRADFIYENLMIQNNVIHNSFLNNVKKL
                     VFFGSGYMYPENAKNPLKEEYLFQGDLEYGAYSFGAAKIAGAIMCESYNIQYGTNFIT
                     LVLNNLYGTKANFDFGKSRVLPALLRKFHLAKLLSEGNITQILQDLKMNNFEEAKEYL
                     HNFGISKKSVEIWGTGKVRREFIHSDDLADVAIYTMQNIDFKDLIKDRKSKNTHINIG
                     TGIDYSIKEVALMVKNIVGFSGELVFNTSRPDSTMDRLMDCSKIHSLGWKHKIELKDG
                     IKMMYEWYKTQN"
     gene            8242..9183
                     /locus_tag="RJ239_001363"
     CDS             8242..9183
                     /locus_tag="RJ239_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase"
                     /protein_id="HDV7331472.1"
                     /translation="MSKKVLITGGAGYIGSVLTPILLEKGYEVCVIDNLMFDQISLLS
                     CFHNKNFTFINGDAMDENLIRQEVAKADIIIPLAALVGAPLCKRNPKLAKMINYEAVK
                     MISDFASPSQIFIYPNTNSGYGIGEKDAMCTEESPLRPISEYGIDKVHAEQYLLDKGN
                     CVTFRLATVFGISPRMRLDLLVNDFTYRAYRDKFIVLFEEHFRRNYIHVRDVVKGFIH
                     GIENYDKMKGQAYNMGLSSANLTKRQLAETIKKYIPDFYIHSANIGEDPDKRDYLVSN
                     TKLEATGWKPDNTLEDGIKELLRAFKMMKVNRFANFN"
     gene            9202..10053
                     /locus_tag="RJ239_001364"
     CDS             9202..10053
                     /locus_tag="RJ239_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HDV7331473.1"
                     /translation="MKKEQLEVLKEALNGLIYQIDNHQQARKPIADVERIISELQVLN
                     HWNKQENVYNALHLIQGAIADPQGLGRLNLLLDNARIPKQYYDIFYKMLYVDKYGGGD
                     GYRPVCIDCGGHAGLITDIILHCGGQSYIFEPNIYLNYFLRKKYENNINVKLFQKAVS
                     DRNYETDFIMFGNRILSQGNRIVESVQDSQTEKTYKVQVIDLCEFIENEILTQHKRIY
                     FLKLDIEGMEFEIMKKIIEKKIYKKIDYIACETHEYMFDDSEKKIGELKQLINKCNIQ
                     NILLDWI"
     gene            10073..11092
                     /gene="hddA"
                     /locus_tag="RJ239_001365"
     CDS             10073..11092
                     /gene="hddA"
                     /locus_tag="RJ239_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-D-manno-heptose 7-phosphate kinase"
                     /protein_id="HDV7331474.1"
                     /translation="MKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCT
                     LIKREDGKIIFDSPDTNSYCEYESKEFLGNDGKLDIFKSIYNRIVKDFTKKPLSFSLH
                     TYSDVPSGSGLGGSSTLVVGVIKAFAEWLNLPLGEYEIAKLAYEIEREDLGIVGGAQD
                     QYAATFGGFNFMEFYNNKRVIVNPLRIKNWIASELEARTVLYFTNITREAKDIEEHKK
                     GKLGDEKSLEAMHAIKQDAIKMKEALFRADFGTLAQILGKSWRSKKIISEIVSNDELE
                     RIYKLAIDNGAYSGKTSGAGAGGFMFFFVDPTKKYNLIKALRKEQGYVQDFSFTKEGV
                     KSWRI"
     gene            11080..11685
                     /gene="gmhA2"
                     /locus_tag="RJ239_001366"
     CDS             11080..11685
                     /gene="gmhA2"
                     /locus_tag="RJ239_001366"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HDV7331475.1"
                     /translation="MENLNSYIKGHFADSILVKEQILKDENLITLIKNASLEVIKAYK
                     NGNKTLLAGNGGSAADAQHIAGEFVSRFYFDRPGIASIALTTDTSILTAIGNDYGYEN
                     LFARQVQAQGVKGDVFIGISTSGNSKNILKALELCKQKEIISIGLSGASGGAMNELCD
                     YCIKVPSTCTPRIQEAHILIGHIICAIVEEELFGKGFSCKQ"
     gene            11673..>12338
                     /locus_tag="RJ239_001367"
     CDS             11673..>12338
                     /locus_tag="RJ239_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HDV7331476.1"
                     /translation="MQAIILCGGLGTRLKSVIKDVPKPMAPINDKPFLEFIFEYLKKQ
                     GIKEVILAVSYKYEVIQEYFKDEFLGIKIKYSIEKEPLGTGGAIKEALKFIKNEAYVL
                     NGDTFFDIDLSKLKLNGSKICLALKQMNDFDRYGTVNVDRQGFVISFEEKIFKNQGLI
                     NGGIYLLTKDIFNEFDLEKKFSFEEFLQENYEKLKAKAHIFDDYFIDIGVPEDYYNFT
                     TNQS"
BASE COUNT         4592 a         1296 c         2205 g         4245 t
ORIGIN      
        1 ttatcgcaat taaaaaaaga gcactataaa gtattagatt ttcatttaag aaaaattaca
       61 cctcaagctt ttttagagat tgttgaaatt catttagccg aatcatgtaa tttaaattgt
      121 tttggttgta atcatttttc acaaatagct gaaaaagaat ttccagatat agaaattttt
      181 aaaaaagata tgcaaagact ttcagaaata tctaaaggta ttgtcggaac ttttagattg
      241 atgggtggcg aacctctttt aaatcccaat tgtatacagt tttttgacat tacaagatat
      301 ttttttccaa aaagtgccat ttggttggta actaatggta ttttacttga taagcaaaat
      361 gaggattttt ggaattcatg ccaaaggaat aaaatgcaaa ttcgtccaac aaagtatcct
      421 ataaaaatta attgggattt gattaaagat aagtgtgatc aatatgatat ccccttgata
      481 ttttttaaca atggagagtt ggaaaaaact tcttggaaat tttctctaga tccttctgga
      541 aattgtgata attaccatag ttttacaaat tgtagtatgg caaatcactg tgttcagttt
      601 aaagatggaa agctatttac ttgtaccttt cctgcacatg tacagcattt taataaaaag
      661 tatggaaatc attttgaagt ttgcgaattt gactttattg atatttataa agccaaggat
      721 tatcaagaaa ttttattttt tctttctaag cctattcctt tttgtagata ttgcaaggta
      781 tcacaatggg cagaaattgg aaaatggcgt tctagcaata aaacaaaaca tgaatattta
      841 atttgaaagt gtattatgat aaaaaaaatt cttcttatta ctccagaact agaatataca
      901 ggagctttaa atagttttaa aagaatatgt gaagtattat tgaataataa atatgctgta
      961 gatatttgga cctataatga aggaccttat attagtgagt ttgataaatt aggcgtatat
     1021 gttgaagtta tttcagaaga tgatattgat tctaaatggg tgcatgaaag aatttcaaaa
     1081 tattcattgg tcatagcaaa tactatagta gtatataaat gtgttgagtt gatccaaaat
     1141 ttaactcctg ttgtttggta tattagagag gctgaaaatc ttcctgattt tttttggaag
     1201 ccagaaagga agttggcttt agaaaaagct aaaaaacttt atgtggttag tgagtatgca
     1261 aaggatttta taattcataa ttataataaa aatgtagagg ttttacataa ttatgtagat
     1321 gatgtttttt atgaaaagca tgacgatttt ttaaaacaga taaagtcaga taaattaaaa
     1381 tttttagctt tagggactat tgaaaaaaga aaaggttatg atgtgttgtt acaagctttc
     1441 attgatcttc cagtagatat aagggatcaa tgtgagcttc attttgctgg aagattttgg
     1501 gagggagcta aagatttttt ccccaagatt ttatcattag ccaaaaaatt tccaaacatt
     1561 ttttatcacg gggaattaag agatagaaaa aaaatacact ctttgatttt ccaatgcaat
     1621 gttatggttg taccatctag agatgaatcg tgctctttgg ttgcattgga aggtgcgatg
     1681 atgtctaaac cattgatatt aactgaaaat attggagcta aatatatttt agatgaaaat
     1741 agtggatggt tggttaaaac cggtagcgta gattctttaa aaaatgcttt tatacaagcg
     1801 tataaaaata aaaataagtt agatgcaatg ggtgcaaatt ctaggaataa ttatcttcaa
     1861 acatccactt atgaaattta tgaaaaaaat attttaaaaa tggttcgaga tgaaatttgt
     1921 aaaaatcaat atttatatcg tattaatcaa gaaaattatg tacttttttc ttttgatatt
     1981 tttgacactt taatttctag aaatatagct aaacctagtg ctgtattttt aataatgaaa
     2041 caaaaaatga gaaatatgga ttttccttta aatttagtta aaaattttga tagaataaga
     2101 gtggaggttg agcagtatta ttatcgaaat gtgtgtaaaa ataaatatga agataccaat
     2161 tttgatgaaa tttataattt attacagcag aatttttctt taagttttca acaaaaagag
     2221 gagttaatga aactcgaaat taatactgaa aaagagacat tatatccaat taaaaaaaat
     2281 atagaattgg ttgaagagct tattaaaaat gaaaagagag ttgttttaat ttctgatatg
     2341 tattttagtt cttctattat tagaaccttt ttaaataaat tttcccctat ttttaataat
     2401 attccaatat atatgtcatc agagtttaga ttaaaaaaaa atagcgggaa tttgtttaag
     2461 gctatattaa atttagaaaa agttgatcca aaaaaatgga ttcattgcgg cgataattgg
     2521 gtgggggatt atcttaagcc ctcaaatttg gaaatttcta caaattttta tattaatcag
     2581 ttgcttccat atgaagaatt tgcattaaac cgtaattcat tagatatgga tttgcaaaaa
     2641 ataattggaa tatctaaaaa gataagactt gagaatacct tgactaactt gcaagagata
     2701 ggagtttcat ttggtgcccc tatgctatta ccttatgttc agtggatttt aaatattgct
     2761 ttaaaaaact ctattagatg tttatatttt atagcaagag atggttatgt attgcaaaaa
     2821 atgaccgata tgttaattca agcaaaaaaa attaatatta aaacaaaata cttgtatggt
     2881 tctcgagagt cttggagaga gccttttaga aataaagata agttaaaaat acagctaatt
     2941 gatgagtatt tggatcaaga aattgataaa caagaaattt ttgcttttgt tgagtgctgt
     3001 ggcacgggtg aaactttgga ttatattgta aaaagaattg aaagtaatca acaatttaaa
     3061 aatatgtttt ttggcagttt atatttatat cgtagtaaat taaataaaac taaaactcaa
     3121 tctttattta tgctcccttt aaatgaaaat tatacttatg gtatagaatt atttgttcgt
     3181 tcgttacaag gtcaggtttt aggatatgat aaaaaagatg gtagagtgat tcctgttttt
     3241 gattttttag aaggggaggc tttgcaaaag tttagatatg atgaatatat cgatggggta
     3301 atgcttttta tggagtatat agtaaaaact gataattatg aaaaaatctt tgacaatatg
     3361 aatgtaacta ttttatatct gaattattta agcaataatt atatagataa aaaatttatc
     3421 gaaattatgg gaaatgttcc atttattctt aatggagtaa aagatagagt gggtattttc
     3481 gctcctaggt taaacaacaa aataacatta gatcaaaaaa attctttttt taactggtct
     3541 gttttaagaa gttgtaaaga tattagagtt aaatataata tggataatga ttgttatttt
     3601 ggccttattg gtgctgtaga tattataaaa tctcatcttt cttataaatt gggtaaagtt
     3661 atacttttaa atattaaaaa tcctttaaaa tggataaagc tgatagtttt aattcctatt
     3721 ttaatttttt ctcatcatga gcaaaaaaaa atttatttaa ctgaaaaaaa aataaacata
     3781 gatttgagtt tttataaaga ttacaatgag gcaattatgg ttagaaattt tttttcctat
     3841 cagcttggag agcttatttt aaaaacatct agaaaatgga atgttttagc tatagtgatt
     3901 ttaccttata agattgcaca gctatataga aagaaattta agaaaggata ataatggata
     3961 attcaaaacc tctcataatt gcaggaaggg atgatggatt tggagagaga atgagagcat
     4021 tattaaatgc tctttatata tctaaaaaat ttggttttaa attcggtttt gtatggagag
     4081 atattaataa tattcaaaat ttattagatg gtaaagtatt gattccttgg gcaaatttgc
     4141 caactagaga gtatttgttt gatcaagatt ttattaaaag ttattataga caagatatag
     4201 aattcgctta tgaaacacca gtattgtgga gtttgtatag acaaagcatt aaaaatattt
     4261 tgaaaaaacc ttacgaaaaa gaatgggggt ggtattcaac tcaaggtgat cttagtgaat
     4321 attttacaga tgttgacgag ggcgaatata gaacagagtt ggtttcatgt tggaaacaaa
     4381 tagatttttc atctcatgtt aaaaaaattt ttgaaaaagc tcatagtaaa tttttagaca
     4441 ttggaaagtt tgttgctata catattagaa caggtgaggt tattcatgat gaattttata
     4501 gaaatatact atatcattgt agatataaaa tctttccata cccatttgct ttagagattg
     4561 ctctaaaaga aataaaaaaa ggacatcgtg ttattttttt tggagatgat cttaatttaa
     4621 tacagaattt aaaagaatat tgttctttca ataaacaagc tcaagaaaat attttttcaa
     4681 tagatgatat catagctttc gaacaattag ataatggata tgatagatta ctttttgaat
     4741 tggttttaat gtctaaatct gagtatatat ttggttctgg gacaacagga ttttcaagat
     4801 gtgctagttg gatagaaaat aaaattttta tcaatatatt tgatcatttg tcgctcattg
     4861 aacaatatga gattatttta aaatatattg atattgaaaa tattgatgac ttgtatcgat
     4921 cgtgcaatta ttttttcctt tttttacttt cggaacaatt gaatttaaat tttgatataa
     4981 aattaagata tttaagtaaa tctttaaggt atgattctgg tagcttaaat tctgaagtgt
     5041 tttatattaa tttgttgttg caaaatgaaa aatttaaaga agcagatgat aggttggagc
     5101 aagtaatttg taaaaataaa aaaaagtttt tcgacttatt gctaggatat ggccaaaatc
     5161 caacttttcc ttacgatatt tatatgaatt attattttaa agattttgat cagtatagta
     5221 atattttcta tgttgcatgt aggatttttt ctgaatttaa tattccagaa tctagggtca
     5281 atacttatta tcctaatttt catcctataa tatttgatca atttaaaatg tttattttta
     5341 aagatcttcc taaaagcgat caagaaatag gtgctgtaaa aaagattcgt aatcatttag
     5401 cttataaact tggcgttgct gctattaaaa attctaaatc tttatgggga tatataagga
     5461 tgccatatgt tttgtcttac ataagagata tgcataaaga aagccaaaat aaaatggata
     5521 aaaaatctat tagtttagaa tattattctg attatgagtc ggctttaaaa gaaaaagagg
     5581 gttttgttta taaattagga cagattataa tcaaagctca taaaaattgg cataaaggag
     5641 gatatattat gttgtggttt gaggttaaaa aattaaaaaa agaatttaaa aaaggaaaat
     5701 aatggcaata gaatttgata tacaagaatc aaaaatttta aaaggagtgt atattataac
     5761 tcctaataaa tttagagatt taagaggtga aatttggaca gcttttacag atgaatattt
     5821 aagcaagttg gttccagatg gaattaaatt taagcatgac aaatttataa attcccattt
     5881 taatgtttta cgtggaatac acggagatgt gaaaacttac aaacttgtaa cttgtgtcta
     5941 tggagaagtg catcaagttg tggttgattg cagaaaagat tccccaactt atttaaaatg
     6001 ggagaaattt attataagtt ataaaaatca gcaacttatt ttattaccac caaatatggg
     6061 aaattctcat tatgtgagtt caaaggaagc agtgtattat tataaacttg cttatgaggg
     6121 ggaatatatg gatgcacctg atcaatttac ttatgcatgg aatgatgaaa gaattggtat
     6181 agattggcca acaaatacgc ctattctttc cgatcgcgat attcttgcaa ctaaaaataa
     6241 aggataaatt atggaaaaat tattaaaaga attaaataat aatattaaac ttagcaatca
     6301 attgtcctat caaatcttaa tgtcaaatat tatttcgaat ttagatattg ataaaaaaga
     6361 taaagaaatt ttacttttat tattacaagc aagagataga aattatattc gtataaataa
     6421 taatgaacaa tgttatcaaa atattataaa ttatttaaat ctcattcgac ctttggaatt
     6481 gcctttgtgt gatttgttaa gaataggtgg taatggagat ggtggttatg tgatgtataa
     6541 tggggggggg ggatatgagt gatattaatg caaaagctct ttctttgggt gtttcggata
     6601 gttctccttg ggatttagaa atggctcaga ggggatttaa ggtgatagaa tatgatgcta
     6661 gtatagaaaa atgtccttat gaccatgaaa atattgtttt tcataaaaaa tttataggta
     6721 atgtaaataa tgagaataca attactttgg tacaagcttt aaaagataat aatttagatg
     6781 agaacaagcc aaatattttg caatgtgata ttgaaaattg cgaatgggat atgcttgaaa
     6841 atattgatat aagtatttta aataaatatt tctcacaagt tatatttgaa tttcatgggt
     6901 gcaatcctga ggagcaagat ggggtggaaa aaagaataag tttgctaaaa aaacttaatg
     6961 aatattttgt tccaatgcat acacattttc acaaccatgg gaaaattttt tattctcaag
     7021 gattattttt tagtaccact ttggaggtta gttatttaag aaaaaatttg attaatcttg
     7081 atattatgaa atatagagat gtcgcagggg gatttaaaaa tttagatttt ccttggattt
     7141 caaatccaga aattccaata cgatttagag gttattgatg caaacaaatt caaaaatata
     7201 tatagcgggg cacaaaggaa ccgcaggtac agcattggta gaaaacttac aaaaaagagg
     7261 atttaataat cttgttttaa aaacaaggca agagcttgat ttggttaatc agcaagcggt
     7321 tgctaaattt tttaaagaag aaaagccaga atatgttttt ttgactgcag tcttaccttg
     7381 tggtgctgca aatgtcgctc aaagggctga ttttatttat gaaaatttga tgattcaaaa
     7441 caatgttatt cacaattcat ttcttaataa tgttaaaaaa ttggtatttt ttggttctgg
     7501 gtatatgtat cctgagaatg ctaaaaaccc attgaaagag gaatatttat ttcaaggtga
     7561 tttagaatat ggcgcttatt cttttggtgc agccaaaata gctggagcta taatgtgtga
     7621 aagttataat attcaatatg gtactaattt cattactctt gttttaaata atctttacgg
     7681 aactaaagca aattttgatt ttggaaaatc aagagtctta cccgcattgc ttagaaaatt
     7741 tcatttagca aaattgttaa gcgagggtaa tataactcaa atccttcaag atttgaaaat
     7801 gaataatttt gaagaagcaa aagaatattt gcataatttt ggaattagta aaaaaagtgt
     7861 agaaatttgg ggcactggaa aagttaggag agaatttatt catagtgacg atctagccga
     7921 tgtagctatc tatacgatgc aaaatattga ttttaaagat cttattaaag atagaaaaag
     7981 taaaaatacc catattaata tagggacagg tattgactat tcaatcaaag aagttgcttt
     8041 gatggtaaaa aatatagttg ggtttagcgg agaactagtt ttcaatactt ctagaccgga
     8101 tagcacaatg gatagactta tggattgctc aaaaattcat tctttaggtt ggaagcataa
     8161 aattgaactt aaagatggta ttaaaatgat gtatgaatgg tataaaacac aaaattgatt
     8221 ttcaaagacg aaaggaaaag tatgtcaaaa aaagttttaa ttacaggtgg tgcaggttat
     8281 ataggttcgg ttttaacgcc gattttactt gaaaaaggtt atgaagtttg tgtgattgat
     8341 aatttgatgt ttgatcaaat ttctctttta tcttgttttc ataataaaaa ttttactttt
     8401 ataaatggtg atgctatgga tgaaaatctt attaggcaag aggtagcaaa agctgatatt
     8461 attattcctc tagctgcttt agttggagct ccactttgta aaagaaatcc aaaattagct
     8521 aaaatgatca attatgaagc cgtaaaaatg ataagtgatt ttgcaagtcc ttctcaaata
     8581 tttatttatc ccaatacaaa cagcggttat ggtataggag aaaaagatgc aatgtgtact
     8641 gaagaatctc ccttgcgtcc tatctcagaa tatgggatcg ataaagtgca tgcggagcaa
     8701 tatttgctcg ataaaggaaa ttgtgtgact tttcgtttag ctactgtttt tggaatttca
     8761 cctagaatga gacttgattt acttgttaat gattttactt atcgtgcata tagagataaa
     8821 tttatagtgc tttttgaaga gcattttaga cgcaattata ttcatgttcg cgatgtggtt
     8881 aaaggattta ttcatggaat tgagaattat gataagatga agggtcaggc ttataacatg
     8941 ggattaagtt ctgcaaattt gaccaaaaga cagcttgctg aaacaattaa aaagtatatt
     9001 cctgattttt atatccattc agccaacata ggtgaagatc cagataaaag agattatttg
     9061 gtttcaaata ctaaattaga ggctacaggt tggaaaccag ataatacttt agaagatggt
     9121 attaaagagc ttttaagagc gtttaaaatg atgaaagtta atcgctttgc aaattttaat
     9181 taaaattaaa ggagataaat aatgaaaaaa gaacaattgg aagtattaaa agaggctcta
     9241 aatggcttga tttatcaaat tgataatcat cagcaagcta ggaaaccaat agctgatgta
     9301 gaaaggataa tttcagagtt gcaagtatta aaccattgga ataagcaaga aaatgtttat
     9361 aatgcattgc atttaattca gggtgctata gccgatccac aagggcttgg tagattaaat
     9421 ttgttattag ataatgccag aattccaaaa caatattatg atatttttta caagatgctt
     9481 tatgtcgata aatatggggg gggggatgga tatcgtccag tatgtattga ttgtggtgga
     9541 catgcaggct taattactga tattatttta cattgtggcg ggcaaagtta tatctttgag
     9601 ccaaatattt atttaaatta ttttttaaga aaaaaatatg aaaataatat aaatgtaaaa
     9661 ctttttcaaa aagcagtatc ggacagaaat tatgaaacag attttattat gtttggaaat
     9721 aggatactat ctcaaggcaa tcgtatagtt gaaagtgtac aagacagtca gacggaaaaa
     9781 acatataaag ttcaagtaat tgatttatgc gagtttatcg aaaatgaaat tttaacacaa
     9841 cataaaagga tttattttct aaaacttgat attgaaggaa tggagtttga gataatgaaa
     9901 aaaattattg aaaaaaaaat atataaaaaa attgattata ttgcttgtga aacacatgaa
     9961 tatatgtttg atgattcaga gaaaaagata ggggagttaa agcaattgat taataaatgt
    10021 aatattcaaa atattttact tgattggata tgataaataa attaggagat ttatgaaaac
    10081 catacgcaca caaactcctc ttcgtctcgg tctagcaggt ggtgggactg atataaattt
    10141 atattgtgat aaatatacag gttatgtttt aaatgcgact atatctttat acatacattg
    10201 tactttgatc aaaagagaag atggaaaaat catttttgat tctcctgata caaattctta
    10261 ctgtgagtac gaaagtaaag aattcttagg aaatgatgga aaattagata tttttaaaag
    10321 tatttataat cgcattgtaa aagattttac aaaaaaacct ttgagttttt ctttgcatac
    10381 ctattcggat gtaccaagtg gtagtggctt gggcggaagc tcaactttgg ttgtaggggt
    10441 tataaaagcc tttgcagaat ggcttaatct acctttagga gaatatgaaa tcgctaaact
    10501 tgcttacgag atagaaagag aagatttagg catagtaggt ggagcacaag atcaatacgc
    10561 cgcaactttt ggtggtttta attttatgga attttataac aataaaagag tcattgttaa
    10621 tcctttgcgt attaaaaact ggatagctag tgagcttgaa gctagaactg tgctttattt
    10681 tacaaatatc acaagagaag caaaagatat agaagagcat aaaaaaggaa agcttggaga
    10741 tgaaaaatct ttagaagcca tgcacgcgat aaaacaagat gctataaaga tgaaagaagc
    10801 tttatttaga gccgattttg gtactttggc gcaaatttta ggaaaatctt ggcggtcaaa
    10861 aaaaatcatt tcagaaatcg ttagtaatga tgagcttgaa agaatttata aacttgctat
    10921 agataacgga gcctatagtg gcaaaaccag cggagcagga gctggtggat ttatgttttt
    10981 cttcgtagat cctactaaaa aatacaactt aatcaaagct ttaagaaaag agcaaggtta
    11041 tgtgcaagat ttttcattta caaaagaggg ggttaaatca tggagaattt aaattcctat
    11101 ataaaaggac attttgcaga ttctatttta gtaaaagaac aaattttaaa agatgagaat
    11161 ttgataactc ttattaaaaa tgcttcatta gaagtcataa aagcttataa aaatggtaac
    11221 aaaactttat tagcaggaaa tggtggcagt gctgcagatg cacagcatat tgcaggggaa
    11281 tttgtaagta ggttttattt tgatagaccc ggtatcgcaa gtattgcact tactacagat
    11341 actagcatat taacagctat tggtaatgac tatggttatg aaaatttgtt tgctagacaa
    11401 gtgcaagctc aaggtgttaa gggagatgtt tttataggca tttcaacaag tggaaatagt
    11461 aaaaatatcc taaaagctct agagctttgc aaacaaaaag aaatcataag cataggctta
    11521 agcggagcta gtggtggggc tatgaatgag ctttgtgatt attgtataaa agtgccttca
    11581 acttgcactc caagaattca agaagcacat attttaatag ggcatattat ttgtgctatt
    11641 gtcgaagaag agcttttcgg taagggtttt tcttgcaagc aataatactt tgcggtggct
    11701 taggaacaag acttaaaagc gttataaaag atgttccaaa acctatggca ccgataaatg
    11761 ataagccttt tttagaattt atttttgagt atcttaaaaa gcaaggtata aaagaagtta
    11821 tcttagcagt atcatacaaa tatgaagtga tacaagaata ttttaaagat gagtttttag
    11881 gcataaaaat aaaatacagc atcgaaaaag agcctttagg aacaggtgga gctataaaag
    11941 aggctttgaa atttataaaa aatgaagctt atgttttaaa cggtgatact ttttttgata
    12001 tagatttaag taaattaaag ctaaatggaa gtaaaatttg tcttgctcta aaacaaatga
    12061 atgattttga tagatatggc acagtaaatg ttgataggca aggttttgtg atttcttttg
    12121 aggaaaaaat attcaaaaat cagggtttaa tcaatggtgg aatttatctt ttaactaaag
    12181 atatttttaa tgaatttgat ttagagaaaa aattttcttt tgaagagttt ttacaagaaa
    12241 attatgaaaa actaaaagct aaagctcata tttttgatga ttattttata gatattggcg
    12301 tgcccgagga ttattataat tttacaacca accaaagc
//
LOCUS       DAPIVO010000052        11003 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.052, whole genome shotgun sequence.
ACCESSION   DAPIVO010000052 DAPIVO010000000
VERSION     DAPIVO010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11003)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11003)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11003
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.052"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            98..1171
                     /locus_tag="RJ239_001368"
     CDS             98..1171
                     /locus_tag="RJ239_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5644 domain-containing protein"
                     /protein_id="HDV7331477.1"
                     /translation="MKKLELRIFRFDKTKDYEAYYKPYIYDNYENFASFYDLLLQVQN
                     DDIYFDFDKDEDTYIVVNKQIIPLFTPLEKIAKEFDFNLCIEPLSTKRAIKDLIIDKN
                     DFLDKYKYLEKFGDEEDKKLYAKYDYLYYATEILDYLPEYMGDGVFYLASKMIEKYPE
                     KKIEILKTLADKEKGIFYHLESKNEILETTIKNLQNEILNLGLFDKNILHFDLPKTNA
                     FDNEIKELKEIKHNFKDFNIAFYGFNACDTLKSKLKAKFISYENSIKNNGFSLLNLNP
                     TLSYKIAADIVLDAYDSGADFMVVKEEKDFYLFDTCAKKLMQTSKRDFEDFYILSRFE
                     FLALIEGIQAPSLKNHTLKVSLI"
     gene            1168..1551
                     /locus_tag="RJ239_001369"
     CDS             1168..1551
                     /locus_tag="RJ239_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDV7331478.1"
                     /translation="MKISLECKDLIIEKTLELFLKDHLVMKKNCDFIISDEKIHTAKP
                     LFIISKNSPFLSIPFSKETLFESLNEFDNALKAAALQLALEQKRLLEEKIDAIALEFK
                     KDYENKIDLAIKDLKNKLVKALNDE"
     gene            1544..2227
                     /locus_tag="RJ239_001370"
     CDS             1544..2227
                     /locus_tag="RJ239_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmD family RNA methyltransferase"
                     /protein_id="HDV7331479.1"
                     /translation="MNDEFISVKDFFNHNEKRKKFLQKQEIKPPKEKTKKTKETKLYT
                     NIESGKYKGKKLLLPSLTTTRSTKSIVKSCVFNVIREDLRSKIFIEAFGGSALIAAEA
                     LSNYALKAYAIELDIKAYKIALENAKNIDPNLEVIHANTFEILPKLIENSKNEIILYL
                     DPPFDIREGFSDIYEKIYHFLENLDLKTLNLIIFEYHSTIKTPEKIQNFQKVKEKKFG
                     STSLSFYSS"
     gene            2286..3332
                     /locus_tag="RJ239_001371"
     CDS             2286..3332
                     /locus_tag="RJ239_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HDV7331480.1"
                     /translation="MRVLTIFLLFMTSIFAVQIKDVANTVGVRDNQLIGYGLVVGLNG
                     SGDGTSSKFTLQSISNLLQGMNIKVDPNDIKSKNTAAVMVTAKLPAFAKSGDKLDITV
                     SSMGDAKSLQGGTLLLTALRGIDGEIYAIAQGSISTGGLTPRPGGTGSHSTAATVMGG
                     ANVEREIPQNFSQNNDLTLSLKVADFKTANNIERVLNTVFGEEVAKAIDSRTVKLKKP
                     EDLSNVDFMARVLEQDIAYKPQSKVIIDERTGTVIAGVDVEVEPVLITHKDITIKIDP
                     NNNTVANQNEIDMKDGGFVDPSSNTLRINNAKSTVANIARMLNKLGATPNDIIAIMEN
                     LKRAGAINADLEII"
     gene            3332..3673
                     /locus_tag="RJ239_001372"
     CDS             3332..3673
                     /locus_tag="RJ239_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331481.1"
                     /translation="MKVDNFLNTYSMNSALLDRAAKARSLESSIKINDNDIVTKSKED
                     KALKEQTNAFEAFFLKQVLDVSLKSQNSLFGKDASDEIYSSMYNDTMSKALSGGMGFS
                     KLLYDFLKERG"
     gene            3736..3933
                     /gene="flgM"
                     /locus_tag="RJ239_001373"
     CDS             3736..3933
                     /gene="flgM"
                     /locus_tag="RJ239_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis anti-sigma factor FlgM"
                     /protein_id="HDV7331482.1"
                     /translation="MINPIQQSYVANTALNTNRIDKETKTNDTQKTENDKASKIAEQI
                     KNGTYKIDTKATAAAIADSLI"
     gene            3976..4410
                     /locus_tag="RJ239_001374"
     CDS             3976..4410
                     /locus_tag="RJ239_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlgN"
                     /protein_id="HDV7331483.1"
                     /translation="MLKQRLDEVNAILAKLIALTEEDIENIKVAKHESVTPSVEEKNK
                     LIAEFITAKKQLDVALVELNNSSTKGLSELLDDEDKQKLDLLKKNLQNLHSKNKEYAK
                     FVLIVKDFLDGLVNKMFDINDGTNNAYGDKKTNPESIFKINV"
     gene            4420..6246
                     /gene="flgK"
                     /locus_tag="RJ239_001375"
     CDS             4420..6246
                     /gene="flgK"
                     /locus_tag="RJ239_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HDV7331484.1"
                     /translation="MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQT
                     TNGYITTGGVQVGTGTAVESIVRLHDEYSYYKLKGASTQLEYTKYMASTLQEIAQRFP
                     DLQNTGILQDLENYNKAWNDFASNPNENATKIALVKASQTLTESVNNTFATLDKIQKK
                     VNDDIKNTVDEINRIGEEIATINKQIYGQEALPTEHANELRDRRDELELTLSKLVSAV
                     ASKNEINQDNRLDTTITDPGHQYNLSIEGFSIVDGINFHPLKLDYDDKNKSYSIYYET
                     PDEKVRDLTAKISGGQLGAQLDLRGRNYSKSEGKYEDGIIQGYMDSLDTFAKTMINET
                     NNLYASSAKSSVTSDYLSGLKGDIPLVNYDRTIQPGSFDIVIYDDKGDKKLTKTITID
                     VNTTMNDIMRQINANTDDNDNKNSNDDVDDHINASFSYDAKTGDGLFQINAKSGFKVA
                     IEDKGTNFAGAFSIGGFFSGTDASDMKVKDSILNDPSTVRASSNGVDSGNDMANKIIQ
                     LQYKKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYNSVYSEYQS
                     KSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLLGLKS"
     gene            6263..7027
                     /locus_tag="RJ239_001376"
     CDS             6263..7027
                     /locus_tag="RJ239_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02757 family protein"
                     /protein_id="HDV7331485.1"
                     /translation="MKNFIHLKAKLDFLANQKNTNHSLFETPDPLQIAKIHNDEFIAL
                     ICALFAYGNAKNIVNFLKKLDFSLLNLQEKQIKKELKNLKYRFQNEKDIQEIFITLSR
                     LKNEISLYELFYQAYQERENTTDAILAFMQKIKTLNSYSSYGYDFFFGKIWQNTPTSP
                     LKRYNMYLRWMVRKDELDLGLFTKIHTKDLLIPLDTHAHKISLTLGLLKRKIYDYKSV
                     LELTQNLKKLDANDPIKYDFALYRLGQSKEIDKFKE"
     gene            7031..7795
                     /locus_tag="RJ239_001377"
     CDS             7031..7795
                     /locus_tag="RJ239_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HDV7331486.1"
                     /translation="MGFEHLNTIYYFILFFVALFAGFIDSIVGGGGLITLPALIACGI
                     PAHLSLATNKLQSVFGSFTATLTYFKSTTLPRLAWGVFFTALGAAIGSYSVLFVKDEQ
                     LKLIILIFLTLTFLYTALRPNLGKHESEPKIKNIKIFHLICGLTLGFYDGFLGPGTGS
                     FWIFACVMLLGFNMRKASINTKILNFTSNIIALAIFLWQYELLWAVGLLMGVGQVLGA
                     YLGSKLVLKTNGKFIKTLFLIVVGATIIKVAWDYFS"
     gene            complement(7788..8969)
                     /locus_tag="RJ239_001378"
     CDS             complement(7788..8969)
                     /locus_tag="RJ239_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002880441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HDV7331487.1"
                     /translation="MKFYEVEFLKNNQNYTKTIKAENLNTAQAKALSKNWKIIDIKEI
                     QKSNFQRLKDENFILFFKELALLCEVGLSVQEAIRELYFMHSCKIMKKILDNLILAQN
                     LNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKSLESQKQLKKAFRYPT
                     LVFLSIIGAFLFLMLFVVPNFKDLFENLGASLPFITHVMLEIYNFLDDYGIFCIFLFV
                     IFIVMLILAYKNFHSFAFSCDFLFLKVPLISRLIIYNQNYYFFMVFSLLLKNGISISK
                     AFDLAIIGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIFDSLVFSMLSVAMKSGRL
                     EVLSEEIAKYYQQKSENLMDRFLIFLEPMMTLFVALLVLFLALGIFLPMWELSSGVNF
                     N"
     gene            complement(8966..10525)
                     /locus_tag="RJ239_001379"
     CDS             complement(8966..10525)
                     /locus_tag="RJ239_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HDV7331488.1"
                     /translation="MESRMDKIFQAYIDNEISLDEICTKFNITSWDFFNKLANFCNLH
                     FVDLDEDNDFIYEGIPFSLLLKFKFLLIKNNDGFMIIRSKPCSLELLEQVKTFMICEK
                     IDTAIADELKIAKILNQIRIQEEIKRLSIKLRLEWQENHKRDDQSCISQIFDFLLHEI
                     LSFHASDIHIEARNNDALIRFRVDGILREFAIFEKDIYEALVFHVKFLACLNLAESRK
                     TQDGSFELDFENERYDFRVSCLPLIYGESVVIRILKHDKEILDLYKLNLGNKNLEILK
                     KILHRPNGMILLTGPTGSGKSTTLYACLNELKSIEKKIISAEDPIEYKIPLVQQILLN
                     SKVGVEFNSVLRAILRQDPDIIMIGEIRDEESLDIALKASLTGHLLLSTLHTNDALST
                     IDRLLDMQAKSYLIASALSLVIAQRLVRKLCPWCKQKSKKHYIEFEGEFFEPKGCERC
                     HHSGFFGRELIAECLEINEDLACAIRENQDKTILMELAKKYGFQTMFEQGLKKAKEGL
                     TSIDELLRVVR"
     gene            complement(10515..10982)
                     /locus_tag="RJ239_001380"
     CDS             complement(10515..10982)
                     /locus_tag="RJ239_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009882975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transformation system protein"
                     /protein_id="HDV7331489.1"
                     /translation="MQKYNKQKNIYLQAIEHKKHLEQKILQAQILQEKNKISREKLYK
                     ELEEVKAVQENTHISKIEIDSKILNISDLKKSFYQNPSYEKALNLAKKYFDIKAYQKT
                     IFWALKANELDKQKQDSWLIFAQAKRALGEEKEAQSALDAYINYYGLMELDGK"
BASE COUNT         4185 a         1694 c         1575 g         3549 t
ORIGIN      
        1 tctttgttca taatgcgtga ttttataaaa tttcctttta aattctagtg aattttagaa
       61 aaattttata taatataaaa atatttaagg aaaaaccatg aaaaaattag aattaagaat
      121 ttttagattt gataaaacta aggattatga ggcttattat aaaccttata tttatgataa
      181 ttatgaaaat tttgcaagtt tttatgatct gcttttgcaa gttcaaaatg atgatattta
      241 ttttgatttt gataaagatg aagatactta catagttgta aataagcaaa tcataccact
      301 ttttacacct ttagaaaaaa tagcaaaaga atttgatttt aatctttgta tcgagccttt
      361 aagtacaaaa agagctatta aagatcttat catcgataaa aatgattttt tagacaaata
      421 caaatatctt gaaaaatttg gcgatgaaga ggataaaaag ctttatgcaa aatatgatta
      481 tttatattat gcaactgaaa ttttagacta tcttcctgaa tatatgggcg atggagtgtt
      541 ttatttggct tcaaaaatga tagaaaaata tcctgaaaaa aagatagaaa ttttaaaaac
      601 tctagcagat aaagaaaagg gtatttttta tcatcttgaa agcaaaaatg aaattttaga
      661 aacaacgatc aaaaacctac aaaatgaaat tttaaattta gggctttttg ataaaaatat
      721 tttacacttt gatttaccta aaaccaatgc ttttgataat gagatcaaag aacttaaaga
      781 aattaaacat aattttaaag atttcaatat agctttttat ggttttaatg cttgcgatac
      841 tttaaaatcc aaacttaagg ctaaatttat ttcctatgaa aacagtataa aaaataatgg
      901 ctttagcttg cttaatctaa atcctacgct aagctataaa atagccgcag atattgtttt
      961 ggacgcttat gatagcgggg ctgattttat ggtagtaaaa gaagaaaaag atttttatct
     1021 ttttgatact tgtgctaaaa aacttatgca aacaagcaaa agagattttg aagactttta
     1081 tattttgagc cgttttgagt ttttagccct tatcgaaggc atacaagctc catcattaaa
     1141 aaatcacact ttaaaggtta gtttgatatg aaaatctctt tagaatgcaa agatctcatc
     1201 atagaaaaaa ctttagaact ttttttaaaa gatcatttgg taatgaaaaa aaattgtgat
     1261 ttcatcatta gcgatgaaaa aattcatacc gcaaaaccct tatttatcat ctctaaaaac
     1321 tctccatttt taagcatacc atttagcaaa gaaaccttgt ttgagtcttt aaatgaattt
     1381 gacaatgcct taaaagcagc agctttgcaa cttgcacttg aacaaaaaag actgcttgaa
     1441 gaaaaaattg acgctattgc tttggaattt aaaaaagatt atgaaaataa aatcgatctt
     1501 gccataaaag atcttaaaaa caaactcgta aaagcactta atgatgaatg atgaatttat
     1561 aagcgttaaa gactttttta atcacaatga aaaaagaaaa aaatttcttc aaaaacaaga
     1621 aattaaacct cctaaagaaa aaacaaaaaa aactaaagaa acaaagcttt atacaaatat
     1681 agaaagtggt aaatacaaag ggaaaaaact acttttacct agtcttacaa caacaagaag
     1741 tactaaaagc atagtcaaaa gttgtgtttt taatgtaata agagaagatt taagaagtaa
     1801 aattttcatt gaagcctttg gcggaagtgc tttaatagcg gctgaagcac taagtaatta
     1861 tgctttaaaa gcttatgcta tagaacttga tataaaagct tataaaattg ctttagaaaa
     1921 tgctaaaaac atagatccaa atttagaagt gatccatgca aatacttttg aaattttacc
     1981 taaactcata gaaaattcaa aaaatgaaat catcttatat cttgacccac cttttgatat
     2041 cagagaaggt tttagtgata tttatgaaaa aatttatcat tttttagaaa atttagattt
     2101 aaagacttta aatttaatca tttttgaata ccactcaacc ataaaaactc ccgaaaaaat
     2161 ccaaaatttt caaaaagtta aagaaaagaa atttggatca actagcttaa gtttttactc
     2221 ttcttaactc acttggaaca ctttttgctt gatctatcat caacaataga ttaaaggaag
     2281 aatccatgag agttttaacg atatttttac tctttatgac aagcattttt gcagtgcaaa
     2341 tcaaggatgt agcaaatact gtaggtgtaa gagataacca acttataggt tatggacttg
     2401 ttgtagggct taatggaagc ggcgatggaa caagctctaa atttacacta caatctatct
     2461 caaacctttt gcaaggtatg aatatcaaag tagatcctaa tgatatcaaa tcaaaaaata
     2521 ccgcagctgt tatggttaca gccaaacttc cagcctttgc aaaaagcgga gataaacttg
     2581 atattaccgt ttcatctatg ggtgatgcaa aatctttaca aggtggaaca cttttactga
     2641 ctgcacttcg tgggattgat ggtgaaattt atgctatagc acaaggctct atctcaacag
     2701 gaggtttaac acctagacca ggaggaacag gttctcactc aactgctgca actgtaatgg
     2761 gcggagctaa tgtagaaaga gaaattccac aaaattttag ccaaaacaat gatctaacct
     2821 taagtttaaa agtagcggat tttaaaaccg caaacaatat agaaagagtt ttaaatactg
     2881 tctttggcga agaagtagct aaagccatcg actctcgcac agtaaaactc aaaaaacctg
     2941 aagatctttc aaatgttgat tttatggcaa gagttttaga acaagatata gcttataaac
     3001 cacaaagcaa agttatcatc gatgaaagaa caggaacagt gattgctgga gttgatgtag
     3061 aggtagaacc tgttttaatc actcataaag atatcactat aaaaatagat ccaaacaata
     3121 acacagtagc taatcaaaat gaaatcgata tgaaagatgg tggttttgta gatccaagtt
     3181 caaatacctt aagaatcaac aatgcaaaaa gcacagttgc aaatatagct agaatgctta
     3241 acaaacttgg agcaacccca aatgacatta ttgctattat ggaaaattta aagcgcgcag
     3301 gtgcaattaa cgcggatttg gagatcatct aatgaaagtg gataattttt taaatactta
     3361 tagtatgaat agcgctttac ttgatcgtgc agccaaagca agaagtttag aatcaagcat
     3421 caaaataaat gacaatgata tagttacaaa gagcaaagaa gataaagcct taaaagaaca
     3481 aaccaatgct tttgaggcat tttttttaaa gcaagtttta gatgtatctt taaaaagtca
     3541 aaattcactc tttggaaaag atgccagcga tgaaatatac tcttccatgt ataatgatac
     3601 catgagtaaa gctttaagtg gaggtatggg tttttcaaaa ttattatacg attttttaaa
     3661 agaaaggggt taagtttttt aaatttaggt cgatatggtt tgtagaggat tataactaag
     3721 atcaaggagg cagaaatgat caatcctata caacaaagtt atgtggcaaa taccgcatta
     3781 aatacaaata gaatagataa agaaactaaa acaaacgata ctcaaaaaac ggaaaatgat
     3841 aaagcgagta aaatcgcaga gcagattaaa aacggtactt ataaaatcga tacaaaagct
     3901 acagctgctg cgattgctga ctctttaatc taaaactttc attctccttt tttttgagag
     3961 agaaaaggag aaaatatgct taaacaaaga cttgatgaag taaatgctat cttagcaaaa
     4021 cttattgctt taaccgaaga agatatagaa aatatcaaag tggctaaaca tgagagtgta
     4081 acgccaagtg tagaagaaaa aaacaaactt atcgcggaat ttattacagc taaaaaacaa
     4141 cttgatgttg ccttggttga gctaaataat agctctacaa aagggcttag tgaactctta
     4201 gatgatgaag ataaacaaaa actagatcta cttaaaaaaa atcttcaaaa ccttcatagt
     4261 aaaaacaaag agtatgctaa atttgttctt attgtcaaag attttcttga tggcttagta
     4321 aataaaatgt ttgatatcaa tgatggaaca aataatgctt atggagataa aaagacaaat
     4381 ccagagtcaa ttttcaagat caatgtataa ggatttataa tgggtatttt tggaacatta
     4441 tacacaggtg ttacaggctt aaaggcaagc gaagttcaaa tcgcaacaac tggaaataat
     4501 atctcaaatg ctaatgcaac tttttataca cgccaaagag tggtgcaaac tacaaatgga
     4561 tatattacaa caggtggagt tcaagtaggc acaggaactg ctgtagaaag tatagtgcgt
     4621 ttgcatgatg agtattctta ctataaatta aaaggtgcat ctactcaact agaatatact
     4681 aaatatatgg cttccacttt acaagaaatt gcgcagcgtt ttcccgactt acaaaatact
     4741 ggaattttgc aagatttaga aaattataac aaagcttgga atgattttgc atctaacccc
     4801 aacgaaaatg ccacaaaaat agcccttgta aaagcttctc agaccttaac agaaagcgtt
     4861 aataacactt ttgcaacctt agataaaatc caaaaaaaag taaatgatga tattaaaaat
     4921 acagttgatg agattaatag aattggtgaa gaaattgcta ctataaataa acaaatttat
     4981 ggacaagaag ccttaccaac agaacacgca aatgaactta gggatagaag agatgaactt
     5041 gagcttactc tttcaaagct agttagtgca gttgcaagca aaaatgaaat caatcaagac
     5101 aatcgccttg atacaaccat cactgatcca ggacatcaat acaatctaag tatagaaggt
     5161 tttagtatag tagatggaat aaattttcat cctttaaagc ttgattatga tgataaaaat
     5221 aaatcttata gcatttatta tgaaactcct gatgaaaaag ttcgcgatct tactgcaaaa
     5281 attagcggtg gacagcttgg tgctcaactt gacttacgcg gtagaaacta tagcaaaagc
     5341 gaaggaaaat atgaagatgg aattatccaa ggttatatgg attctttaga tacttttgct
     5401 aagaccatga tcaatgaaac taacaatctt tatgcaagtt ctgcgaaaag ttctgttact
     5461 tctgattatc tatctgggct taagggagat attcctttag ttaattacga tagaaccata
     5521 caaccaggaa gttttgatat agtcatttat gatgataaag gcgataaaaa actcaccaaa
     5581 accatcacca tagatgtaaa tacaaccatg aatgatatca tgcgccaaat caatgctaat
     5641 acagatgata atgacaataa aaattcaaac gatgatgttg atgatcatat caatgcaagt
     5701 tttagctacg atgcaaaaac tggagatggt ttatttcaaa tcaatgcaaa atcaggtttt
     5761 aaggtagcca ttgaagataa gggcacaaat ttcgcaggtg cgtttagcat aggtggtttt
     5821 ttcagcggaa ctgatgcaag tgacatgaaa gtaaaagatt ccatcttaaa tgatccaagt
     5881 acagtaagag caagctcaaa tggagttgat agtggtaatg acatggcaaa taaaatcatc
     5941 caacttcaat ataaaaaagt taatttttat aatgaagatg gcactatcga taatcttact
     6001 atggaagaat attaccgcaa acttacaggt aaaatagcct cagatggtga aaataacaat
     6061 gtcgtcaatt caagcaatga aactctttat aattctgttt atagcgagta ccaatctaaa
     6121 agtggcgtaa atacaaatga agaattagcc gcccttatac aatatcaatc aagttacggt
     6181 gcagcagcaa aaatcgtctc aaccgtagat caaatgcttg ataccttact agggcttaaa
     6241 tcttaagctc tagtaatatc aaatgaaaaa ttttatccat cttaaagcta agctcgattt
     6301 tttagccaat caaaaaaata ccaatcattc cctttttgaa actccagatc ctttgcaaat
     6361 tgctaaaatt cacaatgatg aatttattgc cttaatttgt gctttatttg cctatggaaa
     6421 tgctaaaaat atagtaaatt ttctaaagaa acttgatttt tctttattaa accttcaaga
     6481 aaaacaaata aaaaaagaac ttaaaaattt aaaataccgc ttccaaaatg aaaaagatat
     6541 acaagaaatt tttatcactc tttcaaggct gaaaaatgaa atttcactct acgaactttt
     6601 ttatcaagcc tatcaagaaa gagaaaatac cacagatgcc atcttagctt ttatgcaaaa
     6661 aatcaaaacc ttaaattcat attcaagtta tggatatgat tttttctttg gaaaaatttg
     6721 gcaaaacacc cctacttcac ctcttaaacg ctataatatg tatctaagat ggatggttag
     6781 aaaagatgaa cttgatcttg gactttttac caaaattcac accaaagatc ttttaattcc
     6841 acttgataca catgcacata aaatttcctt gactttagga cttctaaagc gtaaaatata
     6901 tgattataaa agtgttttag aactcacaca aaatttaaaa aaattagatg caaatgatcc
     6961 cataaaatat gactttgcac tctatcgttt agggcaaagt aaggaaattg acaaatttaa
     7021 ggagtgaaga atgggttttg agcacttaaa tacgatttat tatttcatac ttttttttgt
     7081 agctcttttt gctggtttta tagattctat tgtaggtgga ggagggctta ttactctacc
     7141 agcactcata gcctgtggaa ttcctgcgca tttatcctta gcaacaaaca aactccaaag
     7201 cgtctttggt tcttttacgg ctactttaac ttattttaaa tccaccactc tacctcgtct
     7261 tgcttggggt gtttttttca cagccttagg agcagctata ggaagttata gtgttctttt
     7321 tgtaaaagat gagcaattaa agcttattat cttaatcttt ttaactctta ccttcttata
     7381 tacagcctta cgtcccaact taggcaaaca cgaaagcgaa cctaaaataa aaaatatcaa
     7441 aatttttcat ttaatttgtg gcttaacttt aggattttat gatggatttt tagggcctgg
     7501 aacgggttca ttttggattt ttgcttgtgt gatgctacta ggttttaata tgagaaaagc
     7561 gagcattaat actaaaattt taaatttcac aagcaacatc attgctcttg ctatattttt
     7621 atggcaatat gaacttttat gggctgtagg tttgcttatg ggtgtaggac aagttttagg
     7681 agcttattta ggctcaaaac ttgtattaaa aactaatgga aagtttataa aaactttatt
     7741 tttaatcgtt gtaggagcta ctattattaa agtagcttgg gattatttta gttaaaattg
     7801 acccctgagc taagctccca cataggtaaa aatataccta aagccaaaaa caaaactaaa
     7861 agcgctacaa ataaagtcat cataggctct aaaaaaatca aaaatctatc catcaaattt
     7921 tcgctttttt gttgataata tttggcaatt tcttcactta atacttcaag tcttccactt
     7981 ttcatcgcaa cactaagcat agaaaacacc aaagaatcaa aaatatcaat ctttttaaaa
     8041 gcctgactta actcaagacc agaatctata aaactaaaaa gttttttata ctgaaaaatt
     8101 aaaaatttat tttcaagccc tataatagct aaatcaaaag ctttagatat tgaaattcca
     8161 ttttttaaaa gcaaagaaaa aaccataaaa aaataataat tttgattata aataatcaaa
     8221 cgagaaatca aaggtacttt taaaaataaa aaatcgcaag aaaaagcaaa agaatgaaaa
     8281 tttttataag ctaaaataag cataacaata aaaataacaa acaaaaatat gcaaaaaatt
     8341 ccatagtcat ctaaaaaatt ataaatttct aacattacat gcgtgataaa aggcaaactc
     8401 gcgcctaaat tttcaaataa atctttaaaa ttaggcacta caaaaagcat taaaaacaaa
     8461 aatgctccga taatacttaa aaaaaccaaa gtaggatatc taaaagcctt ttttaattgt
     8521 ttttgactct ctaagctttt ttctcgaagt ttagaaattt gactaaacac ttcactgatt
     8581 tttcctgtct tttcagccgt tttaatcaaa gctaactccg cacgatttaa tccaaaatta
     8641 gcattttcaa aagcttgatt tagattttgg gctaaaatta aattgtctaa tatttttttc
     8701 ataatcttgc aagaatgcat aaaatataat tctctaatcg cttcttgaac acttaatcca
     8761 acttcacaca acaaagctag ctctttaaaa aagagtataa aattttcatc ctttaatctc
     8821 tgaaaattag atttttgaat ttcttttata tcaatgattt tccaattctt tgataaggct
     8881 tttgcttgtg ctgtatttaa attttcagct tttatagttt ttgtataatt ttgattgttt
     8941 ttaagaaatt ctacttcata aaatttcatc ttacaaccct taaaagctca tctatacttg
     9001 taagaccttc tttggctttt tttaaacctt gttcaaacat agtttgaaag ccatattttt
     9061 ttgcaagctc cattaaaatc gttttatctt gattttccct aattgcacaa gctaaatctt
     9121 cattgatctc taagcactca gcgattaatt ctctgccaaa aaatccacta tgatgacaac
     9181 gctcacatcc ttttggttca aaaaattcac cttcaaattc aatataatgt tttttgcttt
     9241 tttgcttaca ccaaggacaa agttttctaa ccaaacgctg tgctataaca agactcaaag
     9301 ccgatgctat caagtaactt tttgcttgca tatccaaaag cctatcaatg gtactaagag
     9361 catcattagt atgcaaggtg cttaaaagca aatgacctgt taaagaagct ttaagtgcaa
     9421 tatctaaact ttcttcatcg cgaatttctc ctatcatgat aatatcagga tcttgcctta
     9481 aaattgctct taaaacacta ttaaactcga ctccaacttt tgaattgagc aaaatttgct
     9541 gcactaaagg aattttatat tctataggat cttctgcgga aataatcttt ttttcaatac
     9601 ttttcaactc atttaaacac gcgtataaag ttgtgctttt accactacct gtaggaccgg
     9661 ttaataaaat cattccattg ggacgatgta aaatcttttt taaaatttct aaatttttat
     9721 ttccaagatt tagtttatac aaatccaaaa tttctttatc atgttttaaa attcttataa
     9781 caacactttc gccataaatc aaaggcaaac atgaaacacg aaaatcatat ctttcatttt
     9841 caaaatctaa ttcaaaactt ccatcttgtg tttttcttga ttcagctaaa ttcaaacaag
     9901 ctaaaaattt gacatgaaaa accaaagctt cataaatatc cttctcaaaa atagcaaatt
     9961 cacgcaaaat tccatcaacc ctaaacctaa tcaaagcatc attatttctt gcctctatat
    10021 gaatatcact cgcatgaaaa gataaaattt catgtaataa aaaatcaaaa atttgactga
    10081 tgcaactttg gtcatctctt ttgtgatttt cttgccattc aagtctaagc ttaatgctta
    10141 atcttttaat ctcctcttga atgcgaattt gatttaaaat tttagctatc tttaattcat
    10201 cggcaattgc agtgtcgatt ttttcacaaa tcataaaagt cttaacttgc tctaaaagct
    10261 ctaaagaaca aggtttggat ctaataatca taaagccgtc attgttttta ataagcagaa
    10321 atttaaattt taaaagtaaa gaaaaaggta taccttcata aataaaatca ttatcttcat
    10381 ctaaatcaac aaaatgtaaa ttacaaaaat ttgctaattt gttaaaaaaa tcccaagaag
    10441 tgatattaaa tttagtgcaa atttcatcaa gacttatttc attatcaata taagcttgaa
    10501 aaattttatc cattctactt tccatctaat tccattaaac cataataatt tatataagca
    10561 tctaaagcac tttgagcttc tttttcttca cctaaagctc ttttagcctg agcaaaaatc
    10621 agccaagaat cttgtttttg cttgtcaagt tcattggctt ttaaagccca aaatattgtc
    10681 ttttgataag ctttaatatc aaaatacttc ttagctaaat ttaatgcctt ttcatagctt
    10741 ggattttgat aaaaagattt ttttaaatca gaaatattta aaattttaga atcaatttct
    10801 atcttgctaa tatgtgtatt ttcctgcacc gctttaactt cttctagttc tttatataac
    10861 ttttccctag aaatcttatt tttttcttgt aaaatttgcg cttgaagaat cttttgctcc
    10921 aaatgctttt tatgttcaat agcctgcaaa taaatatttt tttgcttatt atatttttgc
    10981 attagcacaa aaaaacaaaa tgc
//
LOCUS       DAPIVO010000053        10868 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.053, whole genome shotgun sequence.
ACCESSION   DAPIVO010000053 DAPIVO010000000
VERSION     DAPIVO010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10868)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10868)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10868
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.053"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(13..669)
                     /locus_tag="RJ239_001381"
     CDS             complement(13..669)
                     /locus_tag="RJ239_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HDV7331490.1"
                     /translation="MSKIDEISSKSKANILEHLKKAYKETTFTRIESIDPVEHIQTTQ
                     DMLTEMKQKMSDNKYIVENATKDTLEEKINEIVAKYSFKSMIYGADLNLNLEQIKAEK
                     KICFDKEIENLRSEVFHSDFSIIHARAGVSSHGVALIPSSKTQPRMLSLAPKLCIVLL
                     KKENVVKSLSEALNLVKKENEILPTNILFIAGPSRTADIELITVFGVHGPQIAHIIIY
                     "
     gene            complement(662..2101)
                     /locus_tag="RJ239_001382"
     CDS             complement(662..2101)
                     /locus_tag="RJ239_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HDV7331491.1"
                     /translation="MSQKIPHEQIVQIKLNDKQMQENLMTAMHTLQKNRLNVIDARFK
                     DWQGLRAKAKQAKNNALMSLEERLLEFEKNATKNGIKVHWASSDEDACEIVYEIMKEK
                     NITKLLKGKSMASEEIGLNHYLEKKGLKAIETDLGELILQLNEEPPLHIVVPAIHRNR
                     HEIGEIFKEKLGANLENDEPESLNAVAREHLRKDFEGLKLGLSGVNFAMSREGAFWLI
                     ENEGNGRMCTTAPDIHIALCGIEKIMESFEDAATMVSLLTPSATGQFIPTYNNIITGP
                     RKNGDLDGPKEVHVILFDHNRSKMLAHEDYYEALRCIRCGACMNFCPVYDQIGGHAYQ
                     TTYPGPIGEVISPNIFGIDHTGDILNFCSLCGRCSEVCPVQIPLADLIRKLRCDKIGQ
                     GKNPPLGANNVHHNALEAFAFKQFKNIATNGDKWRFSLSKAHYFNWTVQNFASILPVI
                     KKWYAFKELPQIKMDLYKEVQKLEGVSYE"
     gene            complement(2098..2838)
                     /locus_tag="RJ239_001383"
     CDS             complement(2098..2838)
                     /locus_tag="RJ239_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HDV7331492.1"
                     /translation="MMKKVYFYATCLGSTAMQQSVLNAIKLLRREGIEVIFKKNQTCC
                     AQPSFNSGYFDESREIALYNVDLFDKDYPIVVPSGSCAGMMSHDYKELFKNRPEFSKI
                     KTFSSRVIELSQYLDEVLKVDYEDKGVPIKVTWHSNCHALRVQKSIQASKNLIKKLKN
                     VELVELQYEEECCGFGGTFSVKEPEISNAMVRSKIKDIQNSGAKYLISGDGGCLLNID
                     GTMKRMGLDIKGIHLYDFLLKRLEGGRL"
     gene            complement(2962..4644)
                     /locus_tag="RJ239_001384"
     CDS             complement(2962..4644)
                     /locus_tag="RJ239_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HDV7331493.1"
                     /translation="MEQILTWQQIYDPFSNIWLSALVAFLPILCFLVCLVVLKLKGYQ
                     AGFLTVILATLVALFAYKMPWNLVGASFIQGFTNGMWPIAWIIIAAIFLYKLSIKSGS
                     FEIIKKSVMSITPDHRIQVILIGFCFGSFLEGAIGFGGPVAITAALLVGLGLRPLQAA
                     GLCLIANTAPVAFGAVGIPIIAMANLVGIEQHSVSAMVGRMLVPLSLTIPFFIVFLMD
                     GFKGIKETFPAILVAALSFTTTQFLSSNHLGAELPDIISAVVSLAVTTVFLKFWKPKN
                     IFRFDNESNFTQDNTLSFNQILKAWSPFILLIVCIIIWTQPWFKALFDKDGILSYTSI
                     TLQFSNITTGILSPSITGIGEAKPLSLALGVDLINGKTVAQAGTAILLAAFLTIAILK
                     IKAEDAAECFWVTLKEMAIPCITIGLVVAFAFISKNSGMSTTLGLAFAHTGDAFSFFS
                     PIIGWIGVFLTGSDTSANLLFGTLQQVSAQKLGISEALFLAANSVGGVVGKMISPQSI
                     AIACAAVGLVGKESDLFKFTLKYSVAFIILIGIWTCIIAFFLQGIIPEVIVK"
     gene            complement(4816..5385)
                     /gene="cdtC"
                     /locus_tag="RJ239_001385"
     CDS             complement(4816..5385)
                     /gene="cdtC"
                     /locus_tag="RJ239_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit Cj-CdtC"
                     /protein_id="HDV7331494.1"
                     /translation="MKKIITLFFMFITLAFATPTGDLKDFTEMVSIRSLETGIFLSAF
                     RDTSKDPIDQNWNIKEIVLSDELKQKDKLADELPFGYVQFTNPKESDLCLAILEDGTF
                     GAKSCQDDLKDGKLETVFSIMPTTTSAVQIRSLVLESDECIVTFFNPNIPIQKRFGIA
                     PCTLDPIFFAEVNELMIITPPLTAATPLE"
     gene            complement(5396..6193)
                     /gene="cdtB"
                     /locus_tag="RJ239_001386"
     CDS             complement(5396..6193)
                     /gene="cdtB"
                     /locus_tag="RJ239_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin nuclease subunit
                     Cj-CdtB"
                     /protein_id="HDV7331495.1"
                     /translation="MKKIICLFLSFNLAFANLENFNVGTWNLQGSSAATESKWSVSVR
                     QLVSGANPLDILMIQEAGTLPRTATPTGRHVQQGGTPIDEYEWNLGTLSRPDRVFIYY
                     SRVDVGANRVNLAIVSRMQAEEVIVLPPPTTVSRPIIGIRNGNDAFFNIHALANGGTD
                     VGAIITAVDAHFANMPQVNWMIAGDFNRDPSTITSTVDRELANRIRVVFPTSATQASG
                     GTLDYAITGNSNRQQTYTPPLLAAILMLASLRSHIVSDHFPVNFRKF"
     gene            complement(6190..6996)
                     /gene="cdtA"
                     /locus_tag="RJ239_001387"
     CDS             complement(6190..6996)
                     /gene="cdtA"
                     /locus_tag="RJ239_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit Cj-CdtA"
                     /protein_id="HDV7331496.1"
                     /translation="MQKIIVFILCCFMTFFLYACSSKFENVNPLGRSFGEFEDTDPLK
                     LGLEPTFPTNQEIPSLISGADLVPITPITPPLTRTSNSANNNAANGINPRFKDEAFND
                     VLIFENRPAVSDFLTILGPSGAALTVWALAQGNWIWGYTLIDSKGFGDARVWQLLLYP
                     NDFAMIKNAKTNTCLNAYGNGIVHYPCDASNHAQMWKLIPMSNTAVQIKNLGNGKCIQ
                     APITNLYGDFHKVFKIFTVECAKKDNFDQQWFLTTPPFTAKPLYRQGEVR"
     gene            7109..7342
                     /locus_tag="RJ239_001388"
     CDS             7109..7342
                     /locus_tag="RJ239_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002928786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4492 domain-containing protein"
                     /protein_id="HDV7331497.1"
                     /translation="MYLKHLYFSISQIFNFYKEGFKNLTLGKTLWKIIFIKLFVMFVI
                     LKLFVFDVNFNSIFKSDKEKSTFVLKNLTLEGK"
     gene            7343..8905
                     /locus_tag="RJ239_001389"
     CDS             7343..8905
                     /locus_tag="RJ239_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HDV7331498.1"
                     /translation="MNELSSVDWSRAQFALTALYHFLFVPLTLGLSFMIAIMETIYVK
                     TKNERWKKITKFWLSLFAINFAIGVATGIIMEFEFGTNWANYSWFVGDIFGAPLAVEG
                     IMAFFLEATFFAVMFFGWDKVSKGFHLLSTWCVAIGSNLSAFWILVANGWMQYPVGMS
                     FNPDTARNEMQSFFEVALSPVAISKFLHTIGSGYVISALFVMGISAWFMLKGRHIIEA
                     KKSLVVGASFGLVCSIFLFFSGDESAYRVTQTQPMKLAAMEGVYQGEHRAGLVPFGIL
                     NPKKTIDNNESVFLFDITIPYALSILGNRDPNSFVPGIEDLIYGNESKGIEPMQNRID
                     RGKIAIQTLKDYKLAKENNDTIAMANHKSILETHFKDFGYGYLEKPSDTIPPVALTFY
                     SFHIMVALGSFFFLLFIVTLYLTMANDIEKFRKVLWVCLLSIPLGYIAAEAGWIVAEV
                     GRQPWAIQDLLPVHIAATQLGKVNVQISFWIFAVLFTALLIAEVKIMLTQIKKGFDAH
                     AGHTPLMGKGEK"
     gene            8905..10029
                     /gene="cydB"
                     /locus_tag="RJ239_001390"
     CDS             8905..10029
                     /gene="cydB"
                     /locus_tag="RJ239_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HDV7331499.1"
                     /translation="MFFGLELEGLQIYWWLILSLLGGLLVFMFFVQGGQTLIDELSKD
                     ELEKTMLVNSLGRKWELGFTTLVLFGGAAFAAFPLFYSTSFGGAYWAWLCILFCFILQ
                     AVAYEYRKKENNVYGSKTYEIFLKINGYLGVFLIGVAVSSFFSGSEFILNEHNFVSWQ
                     NPLHGLELLLNPFNYLLGLALVFLARLLGAAYFMNNINDENIKIRAMKKLMINSILFL
                     PFFLGFLAWIFLKDGFSVDTNGVVSMSANLYLYNFLNQMIFAVLLVIGVILVLLGMVQ
                     GTKGCSKAIFTLGLGTVLTVFALLSSIGLGQSAFYPSLSDLQSSLTLKNASSSYYTLS
                     VMAYVSLLVPFVLAYIIYVWNAMDKVKITREEIANDDHAY"
     gene            complement(10223..>10868)
                     /locus_tag="RJ239_001391"
     CDS             complement(10223..>10868)
                     /locus_tag="RJ239_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HDV7331500.1"
                     /translation="YYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQEAA
                     QILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPILHIAKSSAKALKQENIQK
                     IGLLGTKYTMTQDFYKKMLIEENISVITPSDEDIKIVNDIIFNELCKGEIKQDSKEKY
                     LNIIKKLQEKGAKGVLLACTEIGLLISKNDTNIKIFDTSLIHALDAANEALKDL"
BASE COUNT         3483 a         1765 c         1749 g         3871 t
ORIGIN      
        1 tctagtatag aatcagtaaa taataatatg tgcaatttgt ggcccatgaa caccaaaaac
       61 agtgataagt tctatatctg ctgttcttga aggccctgct ataaataaga tattagtagg
      121 taaaatttca ttttcttttt ttactaaatt taaagcttcg ctaagacttt taacaacatt
      181 ttctttttta agcaatacta tgcaaagttt aggtgcaagg cttagcattc taggttgggt
      241 tttacttgaa ggtataagtg caactccgtg agagcttacc cctgctcttg cgtgaatgat
      301 ggaaaaatca ctatgaaaaa cttcagatct taaattttcg atttctttat caaagcaaat
      361 ctttttttct gctttgattt gttctaaatt taaatttaaa tccgctccat aaatcatact
      421 tttaaagcta tattttgcga caatttcatt gattttttct tctaaggtat cttttgtagc
      481 attttcaacg atgtatttgt tatcgctcat tttttgcttc atttctgtaa gcatatcttg
      541 ggttgtctgg atatgttcta caggatctat actttcaatg cgtgtgaaag ttgtttcttt
      601 gtaagctttt ttaagatgtt ctaaaatatt tgctttgctt ttgcttgaaa tttcatcgat
      661 tttactcata gcttactcct tctagttttt gcacttcttt ataaagatcc attttaattt
      721 gaggtaattc tttaaaagcg taccattttt taatcacagg caaaatgctt gcgaaatttt
      781 gtaccgtcca gttgaaataa tgtgcttttg aaagtgaaaa acgccattta tcgccattgg
      841 ttgcgatatt tttaaattgt ttaaaagcaa aggcttctag ggcattgtga tgaacattat
      901 ttgctcctaa aggtggattt ttaccttgtc ctattttatc acatcttaat ttgcgaataa
      961 gatcagccaa aggaatttgg actggacaaa cttcagaaca acgcccacaa agtgaacaga
     1021 aattcaaaat atctcctgta tgatctatac caaaaatatt aggactgatt acttctccta
     1081 taggtcctgg ataagtggtt tgataagcat gtccgccgat ttgatcataa acagggcaaa
     1141 aattcataca agccccgcat cgaatacaac gcaaagcctc ataataatcc tcatgagcta
     1201 acattttaga gcgattgtga tcaaataaaa tcacatgtac ttctttagga ccatctaaat
     1261 ctccattttt tctaggacct gtaatgatat tgttataagt tggtataaat tgtcctgtgg
     1321 ctgaaggagt aagtaaagaa accatagtag ccgcatcttc aaagctttcc atgatttttt
     1381 ctataccaca aagtgcgata tgaatatcag gtgctgtagt gcacattcta ccatttcctt
     1441 cattttctat aagccaaaaa gctccttctc ttgacatggc aaaattgacc ccactaagtc
     1501 caagttttaa gccttcaaaa tcttttctta aatgttctct agccaccgca tttaaacttt
     1561 cgggttcatc gttttctaaa tttgctccta atttttcttt gaaaatttct ccgatttcat
     1621 ggcggtttct atgtatggca ggtacaacta tgtgtaaagg gggttcttca ttaagctgta
     1681 aaataagctc tccaagatcg gtttctatag cttttaaacc ttttttttct aggtagtgat
     1741 ttaggcctat ttcttcactt gccatagact tgccttttaa aagcttggtg atattttttt
     1801 ctttcatgat ttcatagacg atttcacagg catcttcatc actacttgcc caatgcacct
     1861 taatgccatt ttttgtagca tttttttcaa attctaaaag tctttcttct aagctcatta
     1921 aggcattatt tttagcttgc ttagctttag ctcttaagcc ctgccagtct ttaaatctag
     1981 catcaataac attgagtcta tttttttgca aagtatgcat ggcagtcatt aaattttctt
     2041 gcatttgttt gtcattgagt ttaatttgaa cgatttgttc gtgaggaatt ttttgactca
     2101 tagtctccct ccttctaagc gtttaagtaa aaagtcatat aaatgtatgc cttttatatc
     2161 caaacccatt cttttcattg tgccatctat atttaaaaga caacctccat caccactgat
     2221 gagatatttt gcaccgctat tttgtatatc tttgattttg cttcttacca tagcatttga
     2281 aatttcaggc tcttttactg aaaaggttcc tccaaaacca cagcattctt cttcgtattg
     2341 aagttctact aattctacgt tttttagttt tttgataaga tttttactcg cttgtatgct
     2401 tttttgcact cttaaagcat ggcaattaga atgccaagtt acttttatag gtacaccttt
     2461 atcttcataa tctactttta aaacttcatc aaggtattgt gaaagttcta tcactctaga
     2521 gctaaaagtt tttattttgg aaaattcagg cctgttttta aaaagctctt tatagtcatg
     2581 actcatcata cccgcacaag aaccactggg tacaacgatg ggataatctt tatcaaataa
     2641 atctacatta tataaagcga tctcacgact ttcatcgaaa taacctgagt taaaagaagg
     2701 ttgggcgcaa caggtttgat tttttttgaa aatcacttca ataccctcac gccttaaaag
     2761 ttttatcgca tttaaaacgc tttgttgcat agcagtactt cctaagcatg tggcgtaaaa
     2821 atacactttt ttcatcattt ttctcctttt aggataattt aggataaatg ttctaatcct
     2881 gtaaaaataa aagcaaagta aaatttctaa caaatattct aaaaacgaat atttgttgaa
     2941 ataaaactta aattttttta attatttcac tataacttca gggatgattc cttgtaagaa
     3001 aaaagctata atgcaagtcc aaattcctat taaaataata aaagctacag aatattttaa
     3061 tgtgaatttg aaaagatcag attcttttcc cacaagtcca accgctgcac aagctatagc
     3121 aatgctttgt ggactgatca tcttcccaac aaccccacct actgaattag ctgctaaaaa
     3181 taaagcttcg ctaataccta gtttttgagc gcttacttgt tgcaaggttc caaaaagtaa
     3241 attagcactt gtatcagagc ctgttaaaaa tacccctatc cagccaatga ttggtgaaaa
     3301 gaaagaaaaa gcatcacctg tgtgtgcaaa agcaagtcct aaagtagtgc tcataccact
     3361 atttttagag ataaaagcaa aggccacaac caaacctatg gtgatacaag gtatagccat
     3421 ttcttttaag gtaacccaaa agcattctgc agcatcttcg gctttgattt ttaaaatagc
     3481 tatagttaaa aaagcggcaa gtaaaatcgc tgttcctgct tgagctacgg tttttccatt
     3541 gattaaatct acacccaagg ccaaagataa aggcttagct tctcctatgc ctgtgataga
     3601 agggcttaaa attccagttg tgatattgct aaattgtaaa gtaatacttg tatagcttaa
     3661 aattccgtcc ttatcaaaga gagctttaaa ccaaggttgt gtccaaatga taatacaaac
     3721 aatgagtaaa ataaaaggtg accaagcttt taaaatttga ttaaaactta aggtgttatc
     3781 ttgagtgaaa ttgctttcat tgtcaaatct aaaaatattt tttggtttcc aaaatttcaa
     3841 aaatacagtc gtaactgcta aagaaaccac agctgaaata atatcaggta attccgctcc
     3901 taggtgattt gagcttaaaa attgagtagt tgtaaaactt agcgccgcaa ctaaaatagc
     3961 tggaaaagtt tctttaatac ctttaaatcc atccattaaa aaaactatga aaaaaggtat
     4021 agtaaggctt aaaggaacta gcattctacc taccatggca gaaactgaat gctgttctat
     4081 gccgacaaga tttgccatag caataatagg aattcccacc gcaccaaaag caacaggagc
     4141 ggtatttgcg ataagacaaa gccctgcagc ttgtaaagga cgcaagccaa gtcctactaa
     4201 aagtgcagcg gttatagcca cagggccacc aaaacctata gcaccctcta aaaatgaacc
     4261 aaaacaaaaa cctattaaaa tcacttgaat tctatgatct ggagtaatgc tcatcacgct
     4321 ttttttaatg atttcaaaag aacctgactt gatagaaagt ttgtaaagaa agattgccgc
     4381 gatgataatc caagctatag gccacatacc atttgtaaag ccttgaataa aacttgcacc
     4441 cactaaattc caaggcattt tataggcaaa taaagctact aaagtagcaa gtataacagt
     4501 taaaaaacct gcttgatagc ctttaagttt taaaacaacc aaacaaacta aaaaacatag
     4561 tataggtaaa aatgccacta aagcacttag ccaaatattt gaaaaagggt cataaatttg
     4621 ttgccatgtt aaaatttgtt ccaatttttc ctccttgata attattatgt ataaatttat
     4681 tgtaacaaaa aattacatta aaataaaaaa attatagagc aaggtaaatt acattgtatt
     4741 attattaatt attttgtgta ttttagtaat atcataaata ttaaataaat ataaaaatag
     4801 aacaagataa aaatcttatt ctaaaggggt agcagctgtt aaaggtgggg ttataatcat
     4861 tagttcattt acttcagcaa aaaaaatagg atctagggtg caaggggcta ttccaaagcg
     4921 tttttgtata ggaatatttg gattaaaaaa agttactata cattcatcag attccaaaac
     4981 taaagaacga atttgcacag ctgaagttgt tgttggcatt atagaaaata cagtttctaa
     5041 tttaccatct tttagatcat cttgacaaga ttttgctcca aaggttccat cttctaagat
     5101 ggctaaacaa agatcgcttt cttttggatt tgtaaattgc acataaccaa aaggaagttc
     5161 atcagctaat ttatcttttt gttttaactc atcgcttaaa acaatttctt taatattcca
     5221 attttgatca ataggatctt ttgaggtatc cctaaaggcg cttaaaaaaa ttcccgtttc
     5281 taagcttctt atagaaacca tttcggtaaa atctttcaaa tctccagtag gagttgcaaa
     5341 ggctaaagtt ataaacataa aaaacaaagt aataattttt ttcatattaa atgtcctaaa
     5401 attttctaaa atttactgga aaatgatctg aaactatatg agatcttaaa cttgcaagca
     5461 ttaaaatcgc agctaaaagc ggtggagtat aggtttgttg tctatttgaa tttcctgtaa
     5521 ttgcataatc aagagtccct ccgcttgctt gagttgcgct agttggaaaa accactctaa
     5581 ttctatttgc taattctcta tccactgtac ttgttatagt agaaggatca cggttaaaat
     5641 cccctgctat catccagtta acttgaggca tatttgcaaa atgtgcatct acagctgtga
     5701 taattgctcc tacatctgtt cctccattag ctaaagcatg gatattgaaa aaagcatcat
     5761 ttccattgcg aattcctata atgggtcttg aaactgtagt aggtggaggt aaaacaatca
     5821 cttcttcagc ttgcattctt gaaactatag ctaaatttac acgattagct cctacatcaa
     5881 cgcgagaata ataaataaaa accctatcag gccttgaaag agttcctaaa ttccactcat
     5941 attcatcaat aggtgttcca ccttgttgca catggcgtcc tgttggagtg gctgttcttg
     6001 gtaaagttcc tgcttcttgt atcattaaga tatctaaggg gtttgctcca cttacaagtt
     6061 gtcttacact aacactccat ttgctttctg tggctgcgga tgagccttgc aaattccaag
     6121 tgccaacatt aaaattttct aaatttgcaa aagcaaggtt aaaagataaa aataaacata
     6181 taattttttt catcgtacct ctccttggcg atataaaggt tttgcggtaa aaggcggagt
     6241 agttaaaaac cattgttgat caaaattatc tttttttgca cactctacgg taaaaatttt
     6301 aaaaaccttg tgaaaatcac cataaagatt tgtaataggt gcttgtatgc attttccatt
     6361 tcctaaattt ttaatttgaa ccgctgtatt gctcataggg ataagtttcc acatttgtgc
     6421 gtgattgctt gcatcacaag gataatggac aattccatta ccataagcat taagacaagt
     6481 attggttttg gcatttttaa tcattgcaaa atcattagga taaagcaaaa gttgccaaac
     6541 tctagcatcg ccaaatcctt tgctatcgat taaagtatag ccccaaatcc aatttccttg
     6601 tgctaaagcc caaaccgtta aagctgctcc gctagggcct aaaatggtta aaaaatcaga
     6661 aaccgcaggg cgattttcaa aaattaaaac atcattaaaa gcttcgtctt taaagcgagg
     6721 attgatccca tttgctgcat tattgttggc actattgctt gttctagtta aaggtggggt
     6781 aataggagta ataggtacta aatcagcacc gctaattaaa cttggaattt cttgattggt
     6841 aggaaaagta ggttcaagtc ctagttttaa aggatcagta tcttcaaatt ctccaaatga
     6901 acgccccaaa ggatttacat tttcaaattt agaagaacat gcataaagaa aaaaagtcat
     6961 aaaacaacat aaaataaaaa ctataatttt ttgcattaaa aaccttgata tgtatttaaa
     7021 tttttaagaa aataataaca taaatttcat tataattttc cgctttttaa aaatgtttta
     7081 ttttgttgtt tttaaaggta gaatttatat gtatcttaaa cacttatatt ttagcatctc
     7141 tcaaattttt aatttttaca aagaaggttt taaaaattta actcttggaa agaccctttg
     7201 gaaaattatt tttatcaaac tttttgttat gtttgtgatt ttaaaacttt ttgtttttga
     7261 tgtaaatttt aattctattt ttaaaagcga caaagaaaaa agcacttttg tactcaaaaa
     7321 tcttacactc gaaggaaaat aaatgaacga acttagtagc gttgattggt caagagcgca
     7381 gtttgcttta actgcacttt atcatttttt gtttgtgcct ttaaccttag gcttgtcttt
     7441 tatgatcgct atcatggaaa ccatctatgt aaaaactaaa aatgaaagat ggaaaaaaat
     7501 caccaaattt tggctttcat tatttgctat aaattttgct atcggtgtag ctacaggcat
     7561 tataatggaa tttgaatttg gaacaaactg ggcaaattat agctggtttg tgggtgatat
     7621 ttttggtgca cctttggcgg ttgaaggtat tatggcattt tttttagagg ctactttttt
     7681 tgcagttatg ttttttggct gggataaagt aagcaagggt tttcacttac tttcaacttg
     7741 gtgtgtggct ataggaagta atctttctgc tttttggatt ttagtggcaa atggttggat
     7801 gcaatatcct gtaggaatga gctttaaccc tgacacagca agaaatgaaa tgcaaagctt
     7861 ttttgaagta gcactttctc ctgtagctat ttcaaaattt ttacatacca taggcagtgg
     7921 ttatgtaatt tcagctttat ttgtaatggg aatttcagct tggtttatgt taaaaggacg
     7981 ccatattatc gaggctaaaa aaagcttagt tgtaggagct agttttggtt tggtttgttc
     8041 aatctttttg tttttcagcg gagatgaaag cgcttaccgt gtaactcaaa ctcaacctat
     8101 gaaacttgca gctatggaag gggtttatca aggtgaacat cgtgcaggac ttgtaccttt
     8161 tggaatttta aatcctaaaa aaaccataga taataacgaa agtgtgtttt tatttgacat
     8221 tactatacct tacgctcttt ctatattagg aaaccgtgat ccaaattctt ttgttccagg
     8281 aattgaagat ttgatctatg gaaatgaaag caaaggtata gaacctatgc aaaatcgtat
     8341 cgatagagga aaaatcgcta tacaaactct aaaagactat aaacttgcta aagaaaacaa
     8401 tgatacaata gctatggcaa atcacaaatc cattttagaa actcatttta aagattttgg
     8461 ttatggatat ttagaaaaac caagcgatac tattccacct gtggctttaa ctttttatag
     8521 ctttcatatc atggttgctt taggaagttt tttcttttta cttttcatcg ttacgcttta
     8581 tcttaccatg gcaaatgata ttgagaaatt tagaaaagta ctttgggtgt gtttgttatc
     8641 cattccattg ggttatattg ccgctgaagc aggttggatt gttgctgaag taggcagaca
     8701 accttgggca attcaagact tgcttcctgt acatatcgca gcaacacaac ttggaaaagt
     8761 caatgttcaa atttcatttt ggatttttgc agtacttttt acagcattat tgattgcaga
     8821 agttaaaatc atgcttactc agattaaaaa aggttttgac gcacatgcag gacatactcc
     8881 acttatgggc aaaggagaaa aataatgttt tttggtttag aacttgaagg tttgcaaatt
     8941 tattggtggt tgattttaag tttacttggt ggacttttag tttttatgtt ttttgttcaa
     9001 ggtggacaga ctttaatcga tgagcttagc aaggatgagc ttgaaaaaac tatgctagtt
     9061 aattctttag ggcgtaaatg ggagcttggt tttacaactc tcgtactttt tggcggagca
     9121 gcttttgcag cttttccact tttttatagt acaagttttg gcggagctta ttgggcttgg
     9181 ctttgtattt tattttgttt tattttacag gctgtggctt atgaatatcg caaaaaagaa
     9241 aataatgttt atggctctaa aacctatgaa atttttctta aaattaatgg ttatttaggt
     9301 gtgtttttaa tcggagttgc agtaagtagt ttttttagcg gttctgaatt tatcttaaat
     9361 gagcataatt ttgtttcttg gcaaaatcct ttgcacggct tagaactttt acttaatcct
     9421 tttaattatc tcttaggctt agctttagta tttttagcaa ggcttttagg cgcagcgtat
     9481 tttatgaaca atatcaatga tgagaatatc aaaataagag ctatgaaaaa actcatgatc
     9541 aatagtattt tatttttacc ttttttctta ggttttttag cgtggatttt cttaaaagat
     9601 ggttttagtg tagatacaaa tggagttgta agcatgagtg cgaatttata tttatataat
     9661 ttcttaaatc aaatgatttt tgctgttttg cttgttattg gtgtgatttt agtgctttta
     9721 ggtatggttc aaggaacaaa aggttgctct aaagctattt ttaccctagg acttggaacg
     9781 gttttaacag tttttgcttt attatcaagc attggtttag gtcaaagtgc tttttaccca
     9841 tctttaagtg atttacaaag ttctttaact ttaaaaaatg caagttcaag ctattatact
     9901 ctaagcgtca tggcttatgt atctttactt gtaccttttg ttttagctta tattatctat
     9961 gtttggaatg caatggataa agtaaaaatc acacgcgaag aaatcgcaaa cgatgatcac
    10021 gcatattaag gagaaaaaat gttacatgct ttgtttttat tggcttggcc tttagtaatt
    10081 tatctgagct ataaatttat aatgctaaat atcaatcaat tagaaaaaga tagcaaacta
    10141 taaagcaaga taagatttaa accgatataa gtataaatct tttcaaaata ttgcaatttg
    10201 cccatttttg ggtatctttt aatcataaat cttttaaagc ttcattagca gcatcaaggg
    10261 cgtgaataag gcttgtgtca aaaattttga tatttgtatc atttttggat attaataaac
    10321 caatttcagt gcaagctaaa agcactcctt ttgccccttt ttcttgtagt ttttttataa
    10381 tatttaaata tttttcttta gaatcttgct tgatttcacc tttgcaaagc tcattaaaaa
    10441 taatatcatt aacgattttt atatcttcat cactaggagt aataacgcta atattttctt
    10501 caatcagcat ttttttataa aaatcctgcg tcattgtgta tttagtaccc aataaaccaa
    10561 ttttttgtat gttttcttgt tttaaagcct tagcagaact ttttgcaata tgtaaaatag
    10621 ggatatttat attttgttga atttcatcaa aaaccttatg catagtatta gttgcaatta
    10681 ttataaaatt agcccctgca agttctaatt ttttagcaca ttgagtcaaa atttgtgcag
    10741 cttcttgcca tttatcttgg ctttgtaaat tttctatttc ttcaaaatta acactgtaaa
    10801 gtaaaatttt tgcagaattt aaagatttta atttatcatt tatagcttga tttattgttt
    10861 tataataa
//
LOCUS       DAPIVO010000054        10783 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.054, whole genome shotgun sequence.
ACCESSION   DAPIVO010000054 DAPIVO010000000
VERSION     DAPIVO010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10783)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10783)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10783
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.054"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            22..951
                     /locus_tag="RJ239_001392"
     CDS             22..951
                     /locus_tag="RJ239_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2860 family protein"
                     /protein_id="HDV7331501.1"
                     /translation="MKKYLFSCVLASILTQSATAVEFQEGFSGNLSIGVGARDIKSNI
                     STLANSDYLSSYNADNSDSSFIPFIGVELYYGNLIDNDRIFIKNYNGRDISGIALGYE
                     RAYLERFSTSFSVISSLREKAYANPYHEGNREETDVDRYGFKISQLYESDFGKFTTSY
                     LFSKNKYDKDTITYSSLKREGYYHEFELNYNYSLLNLGLNYDYNDADGKAQSYSRYGF
                     SIGTNLAFANDYIFTPNLNLSKYEAVGTDPIFHKKQDGNIVKLNLKVVKNQFLGYNGL
                     YGFANYGIEKRNSDIGFYDETYQIVLTGIGYKF"
     gene            complement(999..2327)
                     /locus_tag="RJ239_001393"
     CDS             complement(999..2327)
                     /locus_tag="RJ239_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HDV7331502.1"
                     /translation="MSSIFSTLSPFRLFVKCAVPNVISMAFISFYYIVDGIFVGKYLG
                     SDALAALALIIPFIMMSFALADMIAIGSAVQISMHLGLGKKNLARKIFSSSMLIIFII
                     SCFIGILEYFLGPVLIDCLNVSDEIKTMTKECMFVFALFAPFTMLSFALDNYLRICGK
                     TAYSMVMNVIIALSNIVLDFIFIVELGWGLFSAALATCLGLVLGGIFGIFPFLFQNLE
                     LKISSLYMNLKIFKNILYNGSSEFFGNISGSLYSIFANFVLLKISDTQAVAAFSIVLY
                     IDSFIIMLIIAMGDAMQPALSYNYAKKDFSRIKAIIKVAFFAGGFLSLFSIVLILIFG
                     ENLITLFTKENNQEFKTFAYTALTLFAFNYFFAWFNVLSGSFLTAFNKASFSLVLSLA
                     QNLFIPLFFLLFLSYFIGLNGVWLSPFFAEFCVLILAWIFLKRIFKDLSL"
     gene            complement(2508..3443)
                     /locus_tag="RJ239_001394"
     CDS             complement(2508..3443)
                     /locus_tag="RJ239_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HDV7331503.1"
                     /translation="MKKIDLIVVGAGPTGIGCAVEAKLKNKEVLILEKSNNICQTLMQ
                     FYKDGKRVDKAYKGCEGTNHGHVPFEDGTKESTIETFQNALKEHNIEVEFGSEVESVK
                     NENGVFLVSTAKGVYECKNIIVAIGRMGKPNKPDYKLPMTLTKIINFNANSVLGNEKI
                     LVVGGGNSAAEYAVDLANSNQVSLCYRKKEFTRLNDINLKDIHEAGNSGKVELKLGID
                     INEVEDDNGKAKVNFTDGTSDIYDRIIYAIGGSTPLDFLQKCGINVDDKGVPLMDENK
                     QSNVKGIFVAGDIATKNGASIVTGLNDAVKILSVL"
     gene            3514..4746
                     /locus_tag="RJ239_001395"
     CDS             3514..4746
                     /locus_tag="RJ239_001395"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HDV7331504.1"
                     /translation="MRNLLENIKKNSQKLLNLTPKDKEKIILKLAQILRENFKIILEA
                     NKKDMANFTKSGAMKDRLLLDEKRILALCEGLEKIAYIEDPIGKISKGWKNYAGLSIQ
                     KMSIPLGLICVIYEARPSLSAEIAALMIKSSNACVFKGGSEAKFTNEAIFTLVNKVLK
                     EFDLQDCFAMFTQRDEILQILAFDDLIDVIIPRGSSNMIQEIANNTKIPLIKQNKGLC
                     HAFVDQSANLDMALKIILNAKCQRVSVCNALETLLIHEKIAKNFISLLIPEFEKFKVK
                     IHAHENALAYFNNSNLKIFKANENTFDTEWLDFALSVKLVKDCDEAIEHINKHSSLHS
                     ETIISNDASNIAKFQRLINSSCIYANASTRFSDGGEFGFGGEVGISTSKLHARGPMGI
                     EDICTYKYIINGEGQIRE"
     gene            4811..5827
                     /locus_tag="RJ239_001396"
     CDS             4811..5827
                     /locus_tag="RJ239_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HDV7331505.1"
                     /translation="MANAFFAALGVGIVLGLSVFFGKLNYGLIAMIGALSFLYVPNTP
                     LYHRMAVVMCCSFGIVSSFFLGILTHFLPAIFAFIPIGIMAMGSSILFRYYNIGAPGY
                     FFFVFSCVLGAYSPFEAKDFIFLVGLVFLGAMVANLMALLYSIVVIYGFKNALPSEIP
                     PREYIGFDAVFVDSLIMGSFVAFSIFIGTFLELERSYWIAISCTAIMQGVTLNSIWIK
                     QIQRIIGTALGVCFAWWLLSKQFHDIELILLMMSLFFIGQFLVNRNYALAMIFFTPYA
                     TYLSEAANFMSENADKLILARLIDVVIGSILGLLGGFVIYKPYLRVHFERIAKYIFRI
                     KQKA"
     gene            complement(5863..6621)
                     /locus_tag="RJ239_001397"
     CDS             complement(5863..6621)
                     /locus_tag="RJ239_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDV7331506.1"
                     /translation="MKIDTHAHIFLKKLNTVANARYKPDYDASFKDYKANLDHYDFNK
                     GVLVQPSFLGIDNEFLLQSIEKDENIKAIVVVDENIKFDELKKLKERKACGVRLNLIG
                     KELPNFKSMVWTQFFENLSKLKMQIEIQRDLDNNLVDIVENLIPYGCNIVIDHLARAN
                     ANLTNLEDLICLKNSRIFFKISGFYRAKIDYANNEQAVKFAKKIYEILKEHFPLSNFV
                     FGSDWPHTNFEANINFSSALVAFNEVVVSKKEQE"
     gene            complement(6632..7924)
                     /locus_tag="RJ239_001398"
     CDS             complement(6632..7924)
                     /locus_tag="RJ239_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HDV7331507.1"
                     /translation="MIMVFLIISSIIVAIILGYITRHNVGIFAMIFAYIIGAFFMDLA
                     PKKIIAFWPISIFFVIFAVSLFYNFATVNGTLEKLAGHLMYRFANHPYLLPFVIFVVS
                     AIIAALGAGFYTVLAFMAPLTFLLCDKIGLSKIAGAMAINYGALGGANFITSQSGIIF
                     RGLMENSGIEANEAFANSSIIFAFTIILPIVVLSFFVFNAFKNNIKISVISKPDPFDY
                     KQKTTLILMFMMIVVVLIFPVLNIIFPHNETISYFNKKIDIAMIAMIFVAIALFLKLA
                     DEKQVVALIPWGTLIMICGVGMLISIAVEAGAIKLFSDLVENEINVIFIPLIMCAIAA
                     FMSLFSSTLGVVTPALFPIVPSIAASSGLSEALLFSCIVVGAQASAISPFSSGGSLIL
                     GSCPDKYKEKLFKDLLIKAVPIGFIAAILATIIMSFIL"
     gene            complement(8043..9047)
                     /locus_tag="RJ239_001399"
     CDS             complement(8043..9047)
                     /locus_tag="RJ239_001399"
                     /inference="COORDINATES: protein motif:HMM:NF022646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2891 domain-containing protein"
                     /protein_id="HDV7331508.1"
                     /translation="MEKFIKQFSFIALENIFRELPNKITHSFNDINDIKPPKLMYPIF
                     YGSYDWHSSVHSHWLLVKILKDFSHFAPKDEIIKALDSQFSKEKAEGELKYLQNPAHK
                     GFERPYGWGWFLKLTLEINLLAKENDKAEIWAKNLEGIADFFVKEFKEFLPKMDYPIR
                     VGTHFNSSFALYFALEYARFKKDQELEYCIIQSAKKWFLNDKNMQALEPCGDEFLSPV
                     LMEAVLLSAVLHKNDFVKFFKAYLPNLEAKEPATLFTPVSVSDRSDGKIAHLDGLNLS
                     RAWCFKILSNFCDENLKILLRNNATEHFDKAIAHIEDDYLGSHWLGSFALLALDVDIL
                     "
     gene            complement(9057..10010)
                     /locus_tag="RJ239_001400"
     CDS             complement(9057..10010)
                     /locus_tag="RJ239_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF979 domain-containing protein"
                     /protein_id="HDV7331509.1"
                     /translation="MISLDLLYYIVGILFLVFGILSFSNQAKDIKSRISGGVFWISYS
                     FTFLLAGVLPHFVMGCIVILLALIAGFNLLKPAKIEVSKEEKEYEIKHANIYKNKLFI
                     PALMVPLITLIGTFLFPYLSFFENKNATLMALIIGIIISSVVACFMFKASPKRAVKDA
                     AHTMDHISWAALLPQILATLGVVFVSTGMGDQVSKLLSSYISLDNAFIAVAVYCIAMA
                     LFTIVMGNAFAAFPVITAAIALPILIIQMHANPAIIGAIGMLSGFCGTLMTPMAANFN
                     IVPAALLNLDDKNGVIKAQFMSGLVLLVANIFLMYFLAFRF"
     gene            complement(9997..10689)
                     /locus_tag="RJ239_001401"
     CDS             complement(9997..10689)
                     /locus_tag="RJ239_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF969 domain-containing protein"
                     /protein_id="HDV7331510.1"
                     /translation="MEWLLLASIPLIVLGFALKINPFLVVTSVGIYAGLVSGFDFVKV
                     VSDIGKSFVDNRYVAIIWLILPLLAVLERKGLREQAKNLISKIKVASTGRILMCYFVF
                     RQVTAALGLLSLGGHAQMIRPLIAPMAEAAAKLKFKNLTHKDSQKIKAFSAGTDNVAV
                     FFGEDIFIAVHSILFIKAFYESNGIIVEPLHLSVWAIPTGILALIIHCSRLYLFDKRL
                     EKTYKGLSDDKS"
BASE COUNT         4034 a         1795 c         1442 g         3512 t
ORIGIN      
        1 caaacatttc aaggagaaca tttgaaaaaa tatttatttt cctgtgtttt agcctccatt
       61 ttaacccaat cagctacggc tgtagaattt caagaaggtt ttagtggaaa tttaagcata
      121 ggtgtgggtg caagggatat taaaagtaat atttcaacct tggcaaacag tgattatcta
      181 agcagttaca atgctgataa ttcagactcc tctttcattc cttttatcgg tgtagaactt
      241 tactatggca accttataga taatgataga atttttatta aaaactacaa tggaagagat
      301 atcagcggta tagctttagg ctacgaaaga gcttatttag agcgttttag cacttctttt
      361 tctgtgattt cctctttaag agaaaaagct tatgcaaatc cttatcatga aggaaataga
      421 gaagaaactg atgttgatag atatggtttt aaaatctctc aactttatga aagtgatttt
      481 gggaaattta ccacttcata tttatttagc aaaaacaaat atgataaaga cactattaca
      541 tatagctctt taaaaaggga ggggtattat cacgaatttg aattaaacta taattatagc
      601 ttattaaacc taggactaaa ttatgattac aatgatgcag acggaaaagc tcaaagctat
      661 tcaagatatg gttttagcat agggacaaat ttggcttttg ctaatgatta catcttcact
      721 ccaaatttaa atcttagtaa atatgaagca gtaggaactg atcctatctt ccacaaaaaa
      781 caagatggta atatagttaa gcttaatcta aaagttgtta aaaatcaatt tttgggttat
      841 aacggacttt atggttttgc aaattatggt atagaaaaaa gaaatagtga tataggattt
      901 tatgatgaaa cctatcaaat tgtcctaact ggtataggat ataaattcta aaaattataa
      961 aaaagctcct ttgataaaat ttaaaaaaga tctatctcct ataaagatag atctttaaaa
     1021 attcttttaa gaaaaatcca agctaaaatc aaaacacaaa attcagcaaa aaatggactt
     1081 agccatactc catttaaacc tataaaataa gataaaaaca aaagaaaaaa caaaggtata
     1141 aataaatttt gcgccaaact taaaaccaaa gaaaagcttg ccttattaaa agctgtcaaa
     1201 aaagaaccac ttagaacatt aaaccatgca aaaaaataat taaaagcaaa aagcgtcaaa
     1261 gctgtataag caaaagtttt aaattcttga ttgttttctt ttgtaaaaag cgtgattaaa
     1321 ttttctccaa atatcaatat aagcactata gagaataaag ataaaaatcc ccctgcaaaa
     1381 aatgccactt ttataatagc tttgattctt gaaaaatctt ttttagcata gttgtaacta
     1441 agtgcaggct gcattgcatc acccatagca ataataagca ttataataaa actatcaata
     1501 tataaaacta tagaaaaagc tgccacggct tgagtatcag aaatttttaa taaaacaaaa
     1561 tttgcaaaaa tactatataa agatcctgaa atattgccaa aaaactcact gcttccgtta
     1621 taaagaatat ttttaaaaat ttttaaattc atatataggc tcgaaatttt aagctctaaa
     1681 ttttgaaaca agaaaggaaa aattccaaaa ataccaccta aaacaagtcc caaacaagtt
     1741 gcaagagcag ctgaaaataa gccccaaccc aactcgacta taaaaataaa atcaagcact
     1801 atattgctca atgctataat cacattcatt accatactat aagcagtttt tccgcaaatt
     1861 cttaaataat tatccaaagc aaaagaaagc atagtaaagg gtgcaaacaa agcaaaaaca
     1921 aacatacatt ctttagtcat cgttttaatc tcatcgctaa catttaaaca atcaatcaaa
     1981 acaggtccta aaaaatactc caaaattccg ataaaacaag agattataaa gataatcaac
     2041 atacttgagc taaatatctt tctagctaaa ttcttcttgc ctaaacctaa atgcatagaa
     2101 atttgcactg ctgatcctat ggctatcata tcagccaaag caaaagacat catgataaag
     2161 ggaataatca aggctagtgc cgctaaagca tcacttccta gatattttcc aacaaaaatt
     2221 ccatcaacta tataataaaa agaaataaaa gccatgctta taacatttgg cacggcacat
     2281 tttacaaaaa gcctaaaagg gcttaaggtg ctaaaaatac ttgacataat aatccttaaa
     2341 atatttaaaa ttaaaaatat tttaaaccgc taataaaatg ccaaaagtcc tagtatgtaa
     2401 gaatttaaat aaagtaattt cgcaataagt ttattaatat ttattttatt ttgcatatga
     2461 attttctaga ttaaactaaa ataaaaattt agcccaaagg ctaaatttta aagcacagaa
     2521 agaattttca cagcgtcatt taaccctgta actatacttg ctccattttt agtagcaata
     2581 tctcctgcta caaagatgcc tttaacattg ctttgtttgt tttcatccat taaaggcacg
     2641 cctttatcat caacattaat cccacatttt tgtaaaaaat caagtggagt agaaccacca
     2701 atagcataaa tgattctatc ataaatatcg cttgtaccat cggtaaaatt tactttagct
     2761 ttgccattat catcttctac ttcattaatg tcaattccta gttttaactc taccttaccc
     2821 gaatttccag cttcgtgaat atctttaaga tttatatcat ttaatcttgt aaattctttt
     2881 ttacgataac aaagactaac ttgatttgaa tttgccaaat ccacagcgta ttctgctgct
     2941 gaatttccgc cacctacaac aagaattttt tcatttccca aaactgaatt ggcattaaaa
     3001 ttaatgattt ttgttaaagt cataggaagt ttgtaatcag gtttattagg tttacccatt
     3061 ctacctatag caacaataat gtttttacac tcataaacac ctttagctgt acttactaaa
     3121 aaaactccat tttcattttt aacgctctca acttcagaac caaattcaac ttctatattg
     3181 tgctctttta aagcgttttg aaaagtttct atagtgcttt ctttggtgcc atcttcaaaa
     3241 ggaacatgtc cgtgattggt tccttcgcat cccttataag ctttatctac tcttttgcca
     3301 tccttataaa attgcattaa agtttgacaa atgttatttg atttttctag tatcaaaact
     3361 tctttgtttt taagcttggc ttcaactgca cagcctatcc ctgttggacc tgcacctact
     3421 acaattaaat ctattttttt catttatatt tacctttcaa ttctaaattt ttttgtataa
     3481 tttatcaagt tttttgtaaa taaaggatta aaaatgcgaa atttgcttga aaatattaag
     3541 aaaaattctc aaaaactact taacttaaca cccaaagata aagaaaaaat tattctaaaa
     3601 ttagctcaaa ttttaagaga aaatttcaaa attatcctag aagcaaataa aaaagatatg
     3661 gcaaatttca caaaaagcgg agcaatgaaa gataggcttt tgttagatga aaaacgtatt
     3721 ttagctcttt gcgaaggcct agaaaaaatc gcttacatcg aagatcctat aggcaaaatt
     3781 tctaaaggct ggaaaaatta tgcgggtttg agcatacaaa agatgagtat tcctttagga
     3841 ctcatttgtg ttatttacga agcaaggcct agtcttagcg ctgaaatcgc agctttaatg
     3901 ataaaaagtt ccaatgcttg tgtatttaaa ggcggaagtg aagcaaaatt tacaaatgag
     3961 gctatattta ctcttgttaa taaagtactt aaggaatttg atttgcaaga ttgttttgct
     4021 atgtttaccc aaagagatga aatcttgcaa attctagcct ttgatgattt aatcgatgtg
     4081 atcatacctc gcggaagttc aaatatgata caagaaattg caaacaatac caaaattcct
     4141 ctcattaagc aaaataaagg cttgtgtcat gcttttgtag atcaaagtgc taacttagat
     4201 atggctttaa aaataatcct taatgcaaag tgtcaaagag taagtgtttg taacgcttta
     4261 gaaacgcttt taatccatga aaaaattgct aaaaatttta taagtctttt aatacctgaa
     4321 tttgaaaaat ttaaggtaaa aattcacgcc catgaaaatg ctttggctta ttttaacaac
     4381 tcaaatttaa aaatttttaa agcaaatgaa aatacctttg atacagaatg gcttgatttt
     4441 gctttaagtg taaaattagt aaaagattgc gatgaagcta tagagcatat caataaacac
     4501 agctccttgc attctgaaac cattatctca aatgatgctt caaatatcgc taaatttcaa
     4561 cgccttataa actcatcttg tatttatgct aatgcttcaa cgcgttttag cgatggagga
     4621 gaatttggct ttggtggaga agttggaatt tcaaccagca aattgcatgc aagaggtcct
     4681 atggggattg aagatatttg cacttataaa tatataatca atggggaagg acaaattcga
     4741 gagtgaataa aatagaaata ctaaagcaac accttaaaga aattgctaaa ttaaattcaa
     4801 gcgaacaagt ttggcaaatg ccttttttgc ggctttaggc gtaggtatag ttttagggct
     4861 tagtgtattt tttggaaaat taaactatgg actcattgcc atgataggag ctttgtcttt
     4921 tttatatgtt ccaaacactc ctttatatca tagaatggct gttgtgatgt gctgttcttt
     4981 tggcatagtt tctagttttt tcttaggaat tttaactcat tttttgcctg caatttttgc
     5041 cttcatccct ataggaatta tggccatggg aagttctatt ttatttagat actataacat
     5101 tggtgcacct ggatattttt tctttgtatt ttcttgtgtt ttaggagcct attctccttt
     5161 tgaagctaag gattttatct ttttagtagg tcttgttttt cttggagcaa tggtagctaa
     5221 tttaatggct ttgttatatt ctatcgttgt gatttatgga tttaaaaatg ctttacctag
     5281 cgaaattcca cctagagaat acataggttt tgatgcagtt tttgtggatt ctttgatcat
     5341 gggttctttt gtggcttttt ctatatttat aggaactttt ttagaacttg aaagaagtta
     5401 ttggatagcc atttcttgca cagctattat gcaaggtgta actttaaatt ctatatggat
     5461 taaacaaatt caacgcatca taggaacggc cttaggagta tgttttgcat ggtggctttt
     5521 atctaaacaa tttcacgata tagagcttat tttacttatg atgtctttgt tttttatagg
     5581 acaattttta gtcaatcgaa actatgcttt agctatgatt ttctttactc cttatgctac
     5641 ttatctttcg gaagcagcta attttatgag tgaaaatgca gataaattaa tactcgctcg
     5701 tttaattgat gttgtaatag gaagcatttt agggctttta ggtggttttg tgatttacaa
     5761 accttatcta agagtgcatt ttgaacgcat tgcaaaatac atctttagga taaaacaaaa
     5821 agcttaaaag ccaaataaag cacaagcatt atcccctaaa atttactctt gttctttttt
     5881 agatacgaca acttcattaa aagccactag agccgatgaa aaattaatat ttgcttcaaa
     5941 atttgtatgt ggccaatcgc ttccaaaaac aaaattgcta agtggaaaat gttcttttaa
     6001 aatttcatat attttctttg caaattttac agcttgttca ttattagcat agtctatttt
     6061 tgctctataa aaaccgctaa ttttaaaaaa tattctagag ttttttaagc aaattaaatc
     6121 ctctaaattt gttaagtttg cattagctct tgctaaatga tcgataacaa tattacaacc
     6181 ataaggaatt aaattttcaa caatatcaac aagattatta tctaaatctc tttgaatttc
     6241 tatttgcatt ttaagcttac ttaaattttc aaaaaattga gtccaaacca tacttttaaa
     6301 atttggtaat tctttgccaa ttaaatttaa tctaactcca caagcttttc tttcttttag
     6361 ttttttaagc tcatcaaatt taatattttc atcaaccaca actatagctt ttatattttc
     6421 atctttttct atactctgaa gcaaaaattc attatcaata cctaaaaaac ttggctgaac
     6481 taaaacccct ttattaaaat cataatgatc taaatttgct ttataatctt taaaactagc
     6541 gtcataatca ggcttatatc ttgcatttgc aaccgtattt aactttttca aaaatatatg
     6601 tgcgtgagta tcaatcttca ttaaattatc cttataaaat aaaactcatt ataatagtag
     6661 ctaaaatcgc cgctataaat cctataggca cagctttaat aagtaaatct ttaaataatt
     6721 tttccttata tttatcaggg caagatccta aaattagact tcctccagaa gaaaaaggag
     6781 aaatagcaga agcttgagcc cctacaacaa tacaagaaaa aagcaatgcc tcgcttaatc
     6841 cactgcttgc agcaatgctt ggaactatag gaaaaagcgc tggagtaacc acacccaaag
     6901 tacttgaaaa aagcgacata aaagctgcaa tagcacacat tattaacgga ataaaaatca
     6961 cattgatctc attttctaca agatctgaaa ataattttat agcccctgct tcaactgcta
     7021 tgctaattaa catccctact ccacaaatca ttatcaaggt tccccaagga attaaagcaa
     7081 caacttgttt ctcatcggcc aattttaaaa ataaagcaat ggcaacaaaa atcatggcta
     7141 tcatggctat atctattttt ttattaaaat aactaattgt ctcattatgt ggaaaaataa
     7201 tatttagcac aggaaagatt aaaacaacaa caatcatcat aaacatgaga attaaagtag
     7261 ttttttgttt ataatcaaat ggatcaggtt ttgaaataac actaattttt atattatttt
     7321 taaaagcatt aaacacaaaa aaagataata ccacaatagg caagattata gtaaaagcaa
     7381 aaataatact agaatttgca aaagcttcat ttgcttcaat gcctgaattt tccatcaatc
     7441 ctcgaaaaat aatcccgctt tgagaagtta taaaatttgc tcctcccaaa gcaccataat
     7501 ttatagccat agctccagca attttgctta aaccgatttt atcgcaaagt aaaaaagtaa
     7561 gtggtgccat aaaagctaaa actgtataaa aacctgctcc taaagcagct ataatagcac
     7621 taaccacaaa aataacaaaa ggaagcaaat aaggatgatt agcaaaacga tacatcaaat
     7681 gtccagctaa tttttcaaga gttccattta cggttgcaaa attataaaac aatgagacag
     7741 caaaaataac aaaaaatata gaaataggcc aaaaagctat gattttttta ggagctaaat
     7801 ccataaaaaa agctcctata atataagcaa aaatcatagc aaaaattcca acattatgtc
     7861 tagtaatata gcccaaaata atagccacta taatactaga gatgattaaa aaaaccatta
     7921 tcatccttta aaatattata gggcttataa tatcaaaaaa tatatttttc aaagcataaa
     7981 aacaaaatct aaatttaaaa aatatctatt tagcaacaaa tttactcatc ttatgaaatt
     8041 ttttataaaa tatccacatc cagagcaagc aaagcaaagc ttcctagcca atgcgaccca
     8101 agataatcat cttctatatg agctatagct ttatcaaaat gctctgtagc attgtttctt
     8161 aaaagaattt ttaaattttc atcgcaaaaa tttgaaagta ttttaaaaca ccaagcacga
     8221 cttaaattta acccatctaa atgtgctatt ttaccatcgc tcctatcact cacactcaca
     8281 ggggtaaata aagttgcagg ctcttttgct tctaaatttg gcaaatatgc tttaaaaaat
     8341 tttacaaaat catttttatg taaaacagca cttaaaagca ccgcttccat caaaacagga
     8401 gataaaaact catctccaca aggctctaaa gcttgcatat ttttatcatt taaaaaccac
     8461 tttttagcac tttggatgat gcaatactcc aattcttgat cttttttaaa tcttgcatat
     8521 tctaaagcaa aatacaaagc aaaagagcta ttaaaatggg ttccaactcg tataggataa
     8581 tccatcttag gtaaaaactc cttaaattct ttaacaaaga aatcagctat gccttctaaa
     8641 tttttagccc aaatttcagc tttgtcattt tctttagcaa gtaaatttat ctccaaagtc
     8701 agttttaaaa accatcccca tccataaggt ctttcaaaac ctttgtgtgc agggttttga
     8761 agatatttaa gctctccttc tgctttttct ttgctaaatt gagaatctag agctttgatg
     8821 atttcatcct ttggagcaaa atgagaaaaa tcttttaaaa ttttcaccaa aagccagtga
     8881 gaatgcacgc tagaatgcca atcataagaa ccataaaata taggatacat aagttttggc
     8941 ggtttaatat cattgatatc attaaaagaa tgtgtaattt tatttggcaa ttctctaaaa
     9001 atattttcta gtgcaataaa gctaaattgt tttataaatt tttccattgt ttctccttaa
     9061 aatctaaaag ctaaaaaata cattaaaaag atattagcca caagcaaaac aagtcctgac
     9121 ataaactggg ctttaattac gccattttta tcatccaaat ttaaaagtgc cgcaggaact
     9181 atattaaaat ttgcagccat aggcgtcatt aaagttccgc aaaatccact aagcattcca
     9241 atcgctccta taatagcagg atttgcatgc atttgtatga ttaaaatcgg caaagcaata
     9301 gcagcagtaa tcacaggaaa agctgcaaaa gcattgccca ttactatagt aaaaagcgcc
     9361 atagcgatac aatacacagc tactgcaata aaagcattat ctaaactaat ataactagat
     9421 aaaagtttag atacttgatc gcccattcct gtagaaacaa aaactacccc aagtgtagcc
     9481 aaaatttgcg gtaaaagcgc tgcccaacta atgtgatcca tagtatgtgc tgcatcttta
     9541 acagctcttt taggagaagc cttaaacata aaacaagcaa ctactgaaga aataattata
     9601 cctataatca aagccatcaa tgtagcattt ttattttcaa aaaaactcaa atagggaaat
     9661 aaaaaagtcc caataagtgt aatcaaagga accattaaag caggaataaa aagtttattt
     9721 ttataaatat ttgcatgttt tatctcatat tctttttctt ctttgctaac ttcgatcttt
     9781 gctggtttta ataaattaaa tcctgctata agtgctagta aaatcactat acaacccatc
     9841 acaaaatgag gcaaaactcc tgctagtaaa aaagtaaaac tataacttat ccaaaatacc
     9901 ccgccgctta ttcttgattt tatatcttta gcttgattag aaaaacttaa aattccaaaa
     9961 actaaaaata aaattcctac aatataataa agtaaatcaa gacttatcat cactcaaccc
    10021 tttataagtt ttttccaatc ttttatcaaa taaataaagt ctagagcaat ggataattaa
    10081 agccaaaatt ccagttggta tagcccaaac tgataaatgc aatggctcaa caataatacc
    10141 attgctctca taaaaagctt taataaataa aatagaatgc acggctataa aaatatcctc
    10201 tccaaaaaat acagcaacat tatccgttcc cgcagaaaaa gctttgattt tttgactatc
    10261 tttatgtgtt aagtttttaa atttaagctt agctgcagct tctgccatag gggctattaa
    10321 aggtcttatc atctgtgcat gtccgcctaa agataaaagc cctaaagctg cagtaacttg
    10381 tctaaaaaca aaataacaca ttaaaattcg tcctgtactg gcaactttta ttttggatat
    10441 taaattttta gcctgctctc ttaagccttt gcgttccaaa acagcaagta aaggtaaaat
    10501 aagccaaatt atagcaacat agcgattatc tacaaaagat tttcctatat cactaacaac
    10561 cttaacaaaa tcaaaacctg aaacaagtcc agcataaatt ccaactgaag ttaccactaa
    10621 aaaggggtta atctttaaag caaaacctaa aacaatcaaa ggtatagaag caagaagtaa
    10681 ccattccatc aaccatctcc acaatatgaa ttagaaatat tatagaaatt ttaaattgaa
    10741 gaaaagttta aaaaaatatt tttaagaatg gaatgagaaa tta
//
LOCUS       DAPIVO010000055        10738 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.055, whole genome shotgun sequence.
ACCESSION   DAPIVO010000055 DAPIVO010000000
VERSION     DAPIVO010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10738)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10738)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10738
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.055"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..792)
                     /locus_tag="RJ239_001402"
     CDS             complement(<1..792)
                     /locus_tag="RJ239_001402"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HDV7331511.1"
                     /translation="MENLYALILGIIEGLTEFLPISSTGHMILGTTILGIDIDEFWKS
                     FLIIIQLGSILAVIFVFWRKLFQGLDIWLKLAVGFFPTGVIGLFVAKYLNALFNGWVV
                     VGMLIFGGVVFILIELAHKNKQYRINSLEEISFKQAFCIGIFQSLAMIPGTSRSGASI
                     IGGLLLEFNRKVAAEFSFLLAIPTMIIATAYSIYKEPELLGNANSLIPLGIGFITAFI
                     VAVLVIKFFLKFISKFDFIPFGIYRIILGFVFFYLYYSGILNAGSE"
     gene            complement(866..2863)
                     /locus_tag="RJ239_001403"
     CDS             complement(866..2863)
                     /locus_tag="RJ239_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HDV7331512.1"
                     /translation="MMYKKQNLPELTLRGLILGSILTIIFTASNVYLGLKVGLTFSSS
                     IPAVVISMAVLSLFKTSNILENNMVQTQASAAGTLSSVIFVIPGLFMCGYWSEFPLWQ
                     TFMICLCGGGLGVLFTIPLRRTMVVESKLAYPEGRAAAEILKVANKDQSSKKGKQGIK
                     EIALGSFIAAIFSLLSNGFKLAASESNFAFIWNKMAFGFSMGYSLALLGAGYLVGLAG
                     AIALFVGMFLAWGIFTPYLSNFEFDSTKNAVDLASSVWSSKVRLIGTGAIAIAALWTL
                     IELLKPVIEGIKEIVKNVKITNQEKNERTNIDLSLKSIFILFVLMVVGLFITFYSFVE
                     DANLSIYYQMLFSFVGTLVSVLIGFFVAAACGYMAGLVGSSSSPISGIGLIGVIISSI
                     VFLVLGVELFQDPMLSKFAVALAIFTTSVILATAAISNDNLQDLKTGHLVGATPWKQQ
                     VALLVGCVFGALAIVPVLNLLYQAYGFVGAMPREGMDASSALAAPQANLMSTIAQGIF
                     HHNIEWGYMAFGVFVGILMIIIDKILKGTQKMSLPPLAVGIGIYLPPAVNIPLVIGGI
                     LKYIVMQHLTKKYAKNSHKEEKLASCEQRGTLFASGLIVGESIFGVIIAGITVFSVSM
                     GGSENPLALNLANFHDSELFALIFFVGVVLYFIKRIVKKDA"
     gene            complement(3046..4200)
                     /locus_tag="RJ239_001404"
     CDS             complement(3046..4200)
                     /locus_tag="RJ239_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate transporter"
                     /protein_id="HDV7331513.1"
                     /translation="MKTLVAFIKDGVKSVTDTAALFVFSILFFSVLNASGFFTKILNA
                     FLSKMKANVYQVCILTVFITAAVHLDGSGASTFLIVIPALLPIYERLGIRKTSMLLII
                     TSAMGVMNVIPWGGPTLRAATNIGMDANLLWHHIIPIQIVGLVLSLLLAIWIAKIEIK
                     RGAGAGNLSGINLNIEKSEHHNEKWFWLNLLVAIGVIGLLISGIFPSYICFMIGLAII
                     LPLNYPNLKTAKKVLDRASAGAMLMYITLIGAGILIGVFDKSGIMEKMGVLILNFVPD
                     YLGAYIPLMVGILAVPMAIIFCTDSYFYGVMPIVLSVTKAFGAEPLTIAIIMVIARNC
                     ATFISPVVPATLLGCGLAEVNIKDHIKRSFFYIWGISIICLIFAEVAGII"
     gene            4163..4387
                     /locus_tag="RJ239_001405"
     CDS             4163..4387
                     /locus_tag="RJ239_001405"
                     /inference="COORDINATES: protein motif:HMM:NF015397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HDV7331514.1"
                     /translation="MTPSLIKATNVLISKTPPLTPEQAHKNAVELAEHTKAWKGHEVL
                     IATHIDKGHIHTHFIVNSVNYENGHKLQWM"
     gene            4439..4813
                     /locus_tag="RJ239_001406"
     CDS             4439..4813
                     /locus_tag="RJ239_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001129922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TnpV protein"
                     /protein_id="HDV7331515.1"
                     /translation="MAKSLFEELGGKYERQGDYLIPCLTVPAEEEQAIGIWGQRHLDY
                     LKQYRKVTYTNLLTSGRLNAYLADINRQAQERFERLIEGMKQAQGITEQLKAENALEW
                     TGCLNNIRACAREIVEKEIIFA"
     gene            5180..7099
                     /gene="tet(O)"
                     /locus_tag="RJ239_001407"
     CDS             5180..7099
                     /gene="tet(O)"
                     /locus_tag="RJ239_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032490535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance ribosomal protection
                     protein Tet(O)"
                     /protein_id="HDV7331516.1"
                     /translation="MKIINLGILAHVDAGKTTLTESLLYTSGAIAELGSVDEGTTRTD
                     TMNLERQRGITIQTAVTSFQWEDVKVNIIDTPGHMDFLAEVYRSLSVLDGAVLLVSAK
                     DGIQAQTRILFHALQIMKIPTIFFINKIDQEGIDLPMVYREMKAKLSSEIIVKQKVGQ
                     HPHINVTDNDDMEQWDAVIMGNDELLEKYMSGKPFKMSELEQEENRRFQNGTLFPVYH
                     GSAKNNLGTRQLIEVIASKFYSSTPEGQSELCGQVFKIEYSEKRRRFVYVRIYSGTLH
                     LRDVIRISEKEKIKITEMCVPTNGELYPSDTACSGDIVILPNDVLQLNSILGNEMLLP
                     QRKFIENPLPMLQTTIAVKKPEQREILLGALTEISDGDPLLKYYVDTTTHEIILSFLG
                     NVQMEVICAILEEKYHVEAEIKEPTVIYMERPLRKAEYTIHIEVPPNPFWASVGLSIE
                     PLPIGSGVQYESRVSLGYLNQSFQNAVMEGVLYGCEQGLYGWKVTDCKICFEYGLYYS
                     PVSTPADFRLLSPIVLEQALKKAGTELLEPYLHFEIYAPQEYLSRAYHDAPRYCADIV
                     STQIKNDEVILKGEIPARCIQEYRNDLTCFTNGQGVCLTELKGYQPAIGKFICQPRRP
                     NSRIDKVRHMFHKLA"
     gene            7151..7324
                     /locus_tag="RJ239_001408"
     CDS             7151..7324
                     /locus_tag="RJ239_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine-rich KTR domain-containing protein"
                     /protein_id="HDV7331517.1"
                     /translation="MMKCEWILCPVCGSKTRNKIRKDTVLENYPLYCPKCRQERLIKV
                     DNLKITVIKEPDA"
     gene            7522..7674
                     /locus_tag="RJ239_001409"
     CDS             7522..7674
                     /locus_tag="RJ239_001409"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331518.1"
                     /translation="MHVPEKGKTFAGEVREETVAWSKDTYQLLKQAEQGKVKSYVQDI
                     AVPTNL"
     gene            complement(7699..8991)
                     /locus_tag="RJ239_001410"
     CDS             complement(7699..8991)
                     /locus_tag="RJ239_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001274343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDV7331519.1"
                     /translation="MSANNNELISISHKIELKPNNKAKTHFKKAFGCARLAYNWGLAK
                     WQEYYKQGIKKSHLELKKEFNVIKKEQFPFVYEVSKYATQQPFLNLNLAFQKFFRDLK
                     QGKVSYPKFKKKKDNFGSYYIGGDQAIIKDEKYLKVPNLGLVKMKEKLRFNGKINSFT
                     ISQSADKFFVSFSMQISKDEYLKTHNKAKNNNLALSIDVGLKSFLSLSNGLEIKAPKP
                     LAKFNRLMIKRARQLSKKQHAKTKQEALQGIKKSSNYLKASIKLNKLHRKIANIRSDF
                     LHKLTSSLVANAKYFCLEDLNVKGMMSNHRLAKSISDVSFYEFKRQLEYKSSYNDKEI
                     YQVDRFYPSSKLCSNCGTIKENLALKDRVYICDECGISIDRDYNASLNLLSQLKQKIG
                     KVLAEFTPADLTALLNDLAINQIATSKVETGIQQKSYL"
     gene            complement(8978..9616)
                     /locus_tag="RJ239_001411"
     CDS             complement(8978..9616)
                     /locus_tag="RJ239_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS607-like element ISChh1 family transposase"
                     /protein_id="HDV7331520.1"
                     /translation="MNKLLSIGQASKALGVTIQTLRNWDKKGLLKPDDMTKGGERRYK
                     LETLKAINKNLVFNKDSLKTIAYARVSSHDQKDDLIRQVQVLELYCSKQGFNYEVIQD
                     LGSGMNYYKKGLTKLLNQILDGKVKRLVLTHKDRLLRFGAELVFAICEAKEVEVIIIN
                     KGEESVKFEEELAKDVLEIITVFSARLYGSRSKKNKKLLDEMQEVVVENVSK"
     gene            complement(9721..9888)
                     /locus_tag="RJ239_001412"
                     /pseudo
     CDS             complement(9721..9888)
                     /locus_tag="RJ239_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343661.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="citrate transporter"
     gene            10204..10551
                     /locus_tag="RJ239_001413"
     CDS             10204..10551
                     /locus_tag="RJ239_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331521.1"
                     /translation="MKKSILFASALLASSMLFADSLKLEGTIAQIYDNNKTLLIDSIY
                     GGQMAIKVLPNTEIEMDDCGIFGTDKDGTFKDLKVGNFLESKISYGTPATPNTQAIPV
                     ARKIEIQCYKKAY"
BASE COUNT         3857 a         1889 c         1694 g         3298 t
ORIGIN      
        1 ttcacttcca gcatttaaaa tcccactata atacaaataa aagaaaacaa atcctaaaat
       61 aatacgataa attccaaaag ggataaagtc gaatttagaa ataaatttta agaaaaattt
      121 tataactaaa actgcaacaa taaaagcagt gataaaacct atgcctaaag gaattaaaga
      181 atttgcattg ccaagaagct caggctcttt ataaatgcta taagctgtag cgataatcat
      241 cgttggaatg gcaagcaaaa aactaaactc agccgcaact tttctattaa attctagcaa
      301 aagtccacca ataatacttg ctccacttct tgaagtacca ggaatcatgg ctaaagattg
      361 aaaaatacct atgcaaaaag cttgtttaaa acttatttct tctaaagaat tgatacgata
      421 ttgtttattt ttatgtgcaa gttctataag aataaacaca acaccgccaa aaatgagcat
      481 tccaaccaca acccaaccat taaataaagc atttaagtat tttgccacaa aaagccctat
      541 aactccggta ggaaaaaatc caactgcaag ttttaaccaa atatcaagcc cttgaaacaa
      601 tttacgccaa aatacaaaaa tgaccgccaa aatagaacca agctggatga taatcaaaaa
      661 gcttttccaa aactcatcta tatcgatacc taaaatagtc gtacctaaaa tcatatgtcc
      721 tgttgaagaa ataggtaaaa actcagtcag accttctata attccaagta ttaaagcata
      781 taaattttcc attttaatcc ttgaatgata attgcaaaag aaaaattata tcagaatgga
      841 ttaaatgggg ttttaacccc aaaaattaag catctttttt aacaatacgc ttaatgaaat
      901 ataatacaac tcccacaaaa aagataagtg cgaaaagctc gctatcatga aaatttgcta
      961 aatttaaagc taaaggattt tcactaccac ccatacttac tgaaaataca gtaattcctg
     1021 cgataattac cccaaaaata ctttcaccca ctataagccc tgaagcaaaa agcgtgcctc
     1081 tttgctcaca acttgcaagt ttttcttctt tatgagaatt ttttgcatat tttttagtca
     1141 agtgttgcat tacaatatat tttaaaattc cgcctataac taaaggtata tttacagcag
     1201 ggggaaggta aatacctatt ccaacggcta aaggcggcaa agacattttc tgtgttcctt
     1261 ttaaaatttt atctataata atcattaaaa ttcctacaaa tacaccaaaa gccatataac
     1321 cccactctat attgtgatga aaaattcctt gggcgatagt gctcattaaa tttgcttgcg
     1381 gtgctgctaa agctgatgaa gcatccatac cttctcttgg cattgctccg acaaaaccat
     1441 aggcttgata aagcaaattt aaaacaggaa ctatagccaa agcaccaaaa acacagccta
     1501 caagtaaagc aacttgttgt ttccaaggag tagctccgac taaatgtcct gtctttaaat
     1561 cttgtaaatt atcattcgaa atagcagctg tagctaaaat aacactagta gtaaaaatag
     1621 ctaatgctac tgcaaattta gaaagcatag gatcttgaaa aagttccaca cctaaaacca
     1681 aaaaaacaat agaagaaata ataacaccaa taagtccgat tccagaaata ggactagaag
     1741 aagatcctac aagtcctgcc atatatccgc aagctgctgc aacaaaaaaa cctattaaaa
     1801 cagaaactaa agttccaaca aatgaaaata gcatttgata ataaatactt aagttagcat
     1861 cttcaacaaa actataaaaa gtaataaata aacccacaac cattaaaaca aaaagtataa
     1921 aaatactttt taaagaaagg tctatatttg ttctttcatt tttttcttga ttagtaattt
     1981 taacattttt aacaatttct ttaataccct caataacggg ttttaaaagt tctattaaag
     2041 tccaaagcgc tgctatagca atagctcctg ttcctataag ccttacttta gaactccata
     2101 cactagaagc taaatctacg gcattttttg tactatcgaa ttcaaaattt gaaagatagg
     2161 gagtaaaaat accccaagct aaaaacatac ctacaaaaag agctatagca cctgctaaac
     2221 caactaaata acctgcccct aaaagtgcca aagaatatcc catagaaaaa ccaaaagcca
     2281 ttttattcca aataaaagca aaattactct cacttgcagc gagtttaaaa ccattgctta
     2341 acaaactaaa aatagcagct ataaaagagc ctaatgctat ttctttaatg ccttgttttc
     2401 cttttttact actctgatct ttattggcta cttttaaaat ttcagctgcg gctctacctt
     2461 caggataagc aagcttgctt tcaaccacca tagtccttct taatggtata gtaaaaagca
     2521 ctccaagtcc gccaccacaa agacatatca taaaagtttg ccaaagtgga aattcactcc
     2581 aatacccaca cataaaaagc cctgggataa caaaaataac tgatgataaa gttcctgctg
     2641 ctgaagcttg agtttgaacc atattatttt ctaaaatatt tgaagtctta aaaagactca
     2701 aaaccgccat ggagatgacc acagctggaa ttgatgatga aaaagtaagt cccactttta
     2761 accccaaata tacatttgaa gctgtaaaaa taatagttaa aatacttccc aaaatcaaac
     2821 cccttaaggt aagttctggt aaattttgtt ttttgtacat catttctccg ttttaaaatt
     2881 tactttcaac ttaaaaaata ttcttataag tttaaattta taatttttct ctaaagcaaa
     2941 ataaaataat acaaaaaaac gcttatattt ttataaattt ttgactcaaa aatatcataa
     3001 aacaatgaac caatcattga aaaatcaaaa gtttttttat tttaattata ttatcccagc
     3061 tacctcagca aaaatcaagc aaataatact tataccccat atataaaaaa agcttctttt
     3121 gatatgatct ttaatattaa cctctgctaa accgcaacct agcaaagttg caggcacaac
     3181 aggagaaata aatgtcgcac aatttcttgc tatcaccatg ataatagcta tagtcaaagg
     3241 ttcagcgcca aaagccttag ttacactcaa aactataggc atcactccat aaaaataaga
     3301 atctgtacaa aaaataattg ccattggaac agccaatatc cctaccatca aaggaatata
     3361 agcacctaaa taatctggaa caaaatttaa aatcaaaaca cccattttct ccataatacc
     3421 acttttatca aatacaccta ttaatatccc agcaccaatt aaagtaatat acataagcat
     3481 tgcaccagca cttgcacgat ctaaaacttt tttagctgtt tttaaattag gataattaag
     3541 cggtaaaatt attgcaagtc ctatcataaa gcaaatataa ctaggaaaaa taccactaat
     3601 taaaagccca ataaccccaa tagctacaag taaatttaac caaaaccatt tttcattatg
     3661 gtgttcgctt ttttctatat ttaaatttat tccagacaag ttacctgcgc ctgcacctct
     3721 ttttatttct atcttagcaa tccaaattgc caaaagaagg gataatacca aacctacaat
     3781 ctgaataggt ataatatggt gccaaagcaa atttgcatcc attcctatgt tagtagccgc
     3841 tcttaaagta ggaccacccc aaggaataac attcataacc cccatagccg aagtaataat
     3901 caataacatt gaagtctttc ttatacctag acgctcataa ataggtaata atgcaggtat
     3961 tacaataaga aaagtagaag cacctgaacc atctaaatgt acagcagcag taataaaaac
     4021 agtaagaatg caaacttgat atacattagc tttcattttt gataaaaacg catttaaaat
     4081 tttagtaaaa aaaccacttg catttaaaac actaaaaaag agtatagaaa aaacaaacaa
     4141 agctgccgta tccgttacgc ttttgactcc atctttaata aaagcaacca atgttttaat
     4201 atcaaaaaca cctcctttaa ccccggagca ggctcacaag aacgctgtcg agctggcaga
     4261 gcatacaaag gcatggaaag ggcatgaagt tctgatagcc acgcatatag acaaggggca
     4321 tatacacacg cactttattg tcaattccgt aaattatgag aacggtcata agctccaatg
     4381 gatgtaggac ggattttgcg gacattcaaa ataaaaaaga atgtggaggt aacagacaat
     4441 ggcaaaatca ttatttgagg aactgggcgg caaatacgaa aggcaagggg attatttgat
     4501 accgtgctta actgtacccg ccgaagaaga acaggcaata ggcatctggg ggcaacggca
     4561 tttagattat ctaaaacagt accgtaaagt tacatacacc aatcttctta caagcggcag
     4621 gctaaacgcc taccttgccg acatcaacag acaggcacag gaacgctttg aaaggctcat
     4681 agagggtatg aaacaggcac agggcataac ggaacagcta aaggcagaaa acgccttaga
     4741 atggacagga tgcctcaata acataagggc ttgtgcgagg gagattgtgg aaaaggaaat
     4801 tatttttgca taaacagatg attagtggca gggggaaatc ctgccgcttt ttctgcttta
     4861 gtttgtcagc ttgacaaata aagggttaaa gaatataatt agattcagta ttatacaagg
     4921 agttaataaa tatgcggcaa ggtattctta aataaactgt caatttgata gtgggaacaa
     4981 aaagtagcag tcccgtttca cttttaatat ggggcttagt tttttgtacc cagtttaaga
     5041 atacttttat catgtgattt tatatgcccg aaaacatata agtgttttgg ggctattgga
     5101 gttatttacc cagtgatagg agtatttatc actgggtatt tttatgccct tttttgggtg
     5161 ttgataggag gaaaatcaca tgaaaataat taacttaggc attctggctc acgttgacgc
     5221 aggaaagaca acattaacgg aaagtttatt gtataccagt ggtgcaattg cagaactagg
     5281 gagcgtagat gaaggcacaa caaggacaga tacaatgaat ttggagcgtc aaaggggaat
     5341 cactatccag acagcagtga catcttttca gtgggaggat gtaaaagtca acattataga
     5401 tacgccaggc catatggatt ttttggcgga agtataccgt tctttatccg tattagacgg
     5461 agcagtatta ttagtttctg caaaggatgg catacaggca cagacccgta tactgtttca
     5521 tgcactacag ataatgaaga ttccgacaat ttttttcatc aataaaattg accaagaggg
     5581 gattgatttg ccaatggtat atcgggaaat gaaagcaaag ctttcttcgg aaattatagt
     5641 gaagcaaaag gttgggcagc atccccatat aaatgtaacg gacaatgacg atatggaaca
     5701 gtgggatgcg gtaattatgg gaaacgatga actattagag aaatatatgt cagggaaacc
     5761 gtttaaaatg tcagaactgg aacaggaaga aaacaggaga ttccaaaacg gaacgttatt
     5821 tcccgtttat cacggaagcg ctaaaaacaa tctggggact cggcagctta tagaagtaat
     5881 tgccagtaaa ttttattcat caacgcctga aggtcaatct gaactatgcg ggcaggtttt
     5941 taagattgaa tattcagaga aaaggcggcg ttttgtttat gtgcgtatat atagcggaac
     6001 attgcatttg agggatgtta ttagaatatc tgaaaaagag aaaataaaaa tcacagagat
     6061 gtgtgttccg acaaacggtg aattatatcc atccgataca gcctgctctg gtgatattgt
     6121 aattttacca aatgatgttt tgcagctaaa cagtattttg gggaacgaaa tgctgttgcc
     6181 gcagagaaaa tttattgaaa atcctctccc tatgctccaa acaacgattg cagtaaagaa
     6241 acctgaacag cgggaaatat tgcttggggc acttacagaa atttcagatg gcgaccctct
     6301 tttaaaatat tatgtggata ctacaacgca tgagattata ctttcttttt tggggaatgt
     6361 gcagatggaa gtcatttgtg ccatccttga ggaaaaatat catgtggagg cagaaataaa
     6421 agagcctact gttatatata tggaaagacc gcttagaaaa gcagaatata ccatccacat
     6481 agaagtcccg ccaaatcctt tctgggcttc tgtcgggttg tccatagagc cgctccctat
     6541 tggaagcgga gtgcagtatg aaagcagagt ttcacttgga tatttaaatc aatcgttcca
     6601 aaatgcggtt atggaggggg ttctttatgg ctgcgagcag gggctgtatg gatggaaagt
     6661 gacagactgt aaaatctgtt ttgaatatgg attgtattat agtcctgtaa gtacccccgc
     6721 agactttcgg ctgctttccc ctatcgtatt ggagcaggct ttaaaaaaag cagggacaga
     6781 actattagag ccatatctcc actttgaaat ttatgcaccg caggaatatc tctcacgggc
     6841 gtatcatgat gctccaaggt attgtgcaga tattgtaagt actcagataa agaatgacga
     6901 ggtcattctg aaaggagaaa tccctgctag atgtattcaa gaatacagga acgatttaac
     6961 ttgtttcaca aatgggcagg gagtctgctt gacagagtta aaaggatacc agccagctat
     7021 tggtaaattt atttgccaac cccgccgccc gaatagccgt atagataagg ttcggcatat
     7081 gttccacaag ttagcttaac agcttgcaaa agtcatataa aatgagattt gaaaggatta
     7141 gagactaatt atgatgaaat gcgaatggat attgtgtcct gtttgtggga gcaaaacccg
     7201 taataaaatt aggaaggaca ctgttttgga gaattatccc ctttattgtc caaaatgcag
     7261 acaagaaaga ttgattaaag ttgacaactt gaagataact gtcatcaaag agccagacgc
     7321 ttaagacgca gagccgatga aattgtggaa caattcacga atcatcggct ctttttgttt
     7381 cgtatttgaa agaacaaact caccaaataa aaaaaacgat attcgggtgg gttattttgt
     7441 tataccctaa attaccctct gagtaagcac gaccttaaag acttaaagga acggtgcaac
     7501 gagcagagct gggaacaggg cttgcatgtg ccggagaaag gaaagacatt tgctggagaa
     7561 gtccgggaag aaacggtggc atggagcaaa gacacctacc agcttttgaa acaggcagag
     7621 cagggaaagg tcaaaagcta tgtgcaggat attgccgttc ctacaaacct ataaaatcct
     7681 ataaaaagat ataaaactct ataaatagga tttttgttgt attcctgttt caaccttgct
     7741 agttgctatt tgatttattg ctaaatcatt taacagagct gtcaagtccg caggcgtaaa
     7801 ttcggcaaga actttgccta ttttttgctt taattgtgaa agcaaattaa gactagcatt
     7861 gtagtctcta tcaatgctaa ttccacattc atcgcaaata taaactctat cttttagagc
     7921 taaattttct tttatagttc cacaattaga gcataattta gaactaggat aaaatctatc
     7981 tacttgatag atttctttat cgttgtagct agatttatat tctagttgcc ttttaaactc
     8041 ataaaaactt acatcgctta tagatttagc aagtctatga ttactcatca tcccttttac
     8101 atttaaatcc tctaagcaaa aatatttagc atttgctacc aagctagaag taagcttgtg
     8161 taaaaaatca cttcttatat ttgctatttt acgatgcaat ttatttagct taatacttgc
     8221 ttttagataa ttgctagatt ttttaatgcc ttgtaatgct tcttgcttgg tttttgcgtg
     8281 ttgctttttg cttagctgtc tagctctttt tatcattaaa cgattaaact tagctaatgg
     8341 tttaggtgct tttatctcta agccattaga taaacttaaa aacgatttta agcctacatc
     8401 tatgctaagt gctagattat tatttttagc tttattatga gtttttagat actcatcttt
     8461 actaatttgc atactaaaag aaacaaagaa tttatcagca ctttgagaaa tagtaaaaga
     8521 attgatttta ccattaaatc tcaatttctc tttcattttt acaagtccta aatttggcac
     8581 ttttagatat ttttcatctt tgattattgc ttggtctcca cctatgtaat aagagccgaa
     8641 attatctttc tttttcttaa attttggata gcttacttta ccttgtttta aatctctaaa
     8701 aaatttttga aatgctagat ttagatttaa aaaaggctgt tgcgtagcat atttacttac
     8761 ttcataaacg aaaggaaatt gttctttttt tataacatta aactcttttt taagctctaa
     8821 atgagatttt ttaatgcctt gcttatagta ttcttgccat ttagcaagtc cccaattata
     8881 agcaagtcta gcacaaccaa aggctttttt aaaatgagtt ttagctttat tatttggctt
     8941 taactctatc ttatgagaaa tgctaataag ctcattatta tttgctgaca ttttctacca
     9001 ccacttcttg catttcatct aaaagttttt tatttttctt tgagcgtgag ccataaagtc
     9061 tagctgaaaa tactgtgatt atttccaaca catctttggc taattcttct tcaaatttta
     9121 cgctttcttc gcctttattt attattatta cttctacttc tttggcttca catatagcaa
     9181 atactagctc agcaccaaag cgtaaaagtc tgtctttgtg agttaaaact aatcttttta
     9241 ctttgccatc tagaatttga tttagcaatt tagttaagcc ttttttataa taattcatac
     9301 cagagcctaa atcttgtata acttcataat taaagccttg tttagaacaa tatagctcta
     9361 agacttgaac ttgccttatt aaatcatctt tttggtcgtg gctagaaaca cgagcataag
     9421 caatagtttt taagctatct ttattaaaaa ctaggttttt atttatagct tttaatgttt
     9481 ctagcttata cctacgctct ccacccttag tcatatcatc aggttttaat aagccttttt
     9541 tatcccaatt tctaagagtt tggatagtaa caccaagagc tttactagct tgaccgattg
     9601 ataataattt attcatagga ctattttagc aaattttaaa aaataagtca agtaaaatct
     9661 ataaaatatt tatataattt tatagatttt tttataattt acttagcagt tataagccct
     9721 taaagctgca cccacgccaa aaccaagctg ttcaagaata agtaaaatac aagctacact
     9781 aatacttaca cttataaaag ctaatgccgg agtagcataa tcttttagca aaagccaaac
     9841 tatcaatcct aatgagaaaa aacccaataa agctaaaaaa atttccatat cctatccttt
     9901 tgtatcattt ttattcaata ataaaatgga tattttaagt ccaacttata tgtgtttaaa
     9961 tttatagatt tttggaaaaa atatattttt taatgtaact attttaaaca agaataaaaa
    10021 ataattttta attatttttg ataaagtatt cactctttta aatttacaac tagaagtaac
    10081 gattggtaaa tatgataaat cacataatct tatcaaaact aaaaagtcaa aatttttaac
    10141 ttcacattca cttcacttaa aaagtttata atgttatcac tttacattga aggagaaata
    10201 attatgaaaa aaagtatttt atttgcatca gcacttttag ctagctcaat gctttttgca
    10261 gatagtctaa aacttgaagg tactattgca caaatttatg ataacaataa aaccttgctt
    10321 attgactcaa tttatggcgg acaaatggct ataaaagttc taccaaatac cgaaatagaa
    10381 atggatgatt gtggtatttt tggaacagat aaagatggaa cttttaaaga cttaaaggtt
    10441 ggaaattttt tagaaagtaa aatttcttat ggaacacctg ctacgccaaa tactcaagct
    10501 attccagtag ctagaaaaat tgaaattcaa tgttataaaa aagcttatta atataaatcc
    10561 cttaacaagg gatttataaa aatcattctt tactaaacta cttcatcact cttaaataaa
    10621 aatttaaact cttttttaac aagcaattta taaaataaca cttatatttt catctaaggc
    10681 aaataatgaa aaaatggatt tttattgttt tttgttttat attaggtttt attattca
//
LOCUS       DAPIVO010000056        10723 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.056, whole genome shotgun sequence.
ACCESSION   DAPIVO010000056 DAPIVO010000000
VERSION     DAPIVO010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10723)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10723)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10723
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.056"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..148
                     /locus_tag="RJ239_001414"
     CDS             <1..148
                     /locus_tag="RJ239_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlgG"
                     /protein_id="HDV7331522.1"
                     /translation="GYGVSGTQWMDFNEPSNRMNITGLKDFSNSLISNVYKTPEQAKE
                     ADEI"
     gene            164..688
                     /locus_tag="RJ239_001415"
     CDS             164..688
                     /locus_tag="RJ239_001415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331523.1"
                     /translation="MIKGLSSETLGLSLEEIKNVSRGEDWQFNPDMSVYPQNEDGSYS
                     KETLFMSFLKAQGGQPVESLKTTLNPKLEAYKRAMAKESFSGPAINIDSIMTGKSDFK
                     SFFRYWAERGIEGDLYMYENNISKESAMGNWALDAEIKQALANGWKAKPSTIDSYADS
                     IMDRLNNLLGQTRV"
     gene            783..1553
                     /locus_tag="RJ239_001416"
     CDS             783..1553
                     /locus_tag="RJ239_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HDV7331524.1"
                     /translation="MKKIILIFISFFALNLSAKDLVVGMELGYPPFEMSDKTGKASGI
                     SVDFLEAFAKKNGYKLVVKNIAWDGLIPALKTAKIDLIMSSMTITDKRKKVVDFSIPY
                     AKANLAILTPLNSDITNIKDLDKKGKVLALKRGSTGHLYAVKNLKNATINLFDKENAA
                     ILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILAPFQENPEFWGIAVRKGDEALKDK
                     LDNFIDESRKNGFLDFLGNKYLKDIKEVFKQNNITFFL"
     gene            1646..1873
                     /locus_tag="RJ239_001417"
     CDS             1646..1873
                     /locus_tag="RJ239_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7331525.1"
                     /translation="MKKVAFFLLFLFLSCTVLNAAREYCKYAYQEDRAIPLILNYGIR
                     LGVVGAGVANAPAPGGSTYNSKIDMMAARCH"
     gene            1899..2123
                     /locus_tag="RJ239_001418"
     CDS             1899..2123
                     /locus_tag="RJ239_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331526.1"
                     /translation="MLEFIFTLILDFTFYSIKTLEKVFLGRTALVILFVVFIALFCVK
                     GLFLYILLALELFLLLYLFLGILFLRFYKS"
     gene            complement(2120..2854)
                     /gene="fliP"
                     /locus_tag="RJ239_001419"
     CDS             complement(2120..2854)
                     /gene="fliP"
                     /locus_tag="RJ239_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344227.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HDV7331527.1"
                     /translation="MKKILLFLLLSMSLFAAEATIPTVNLSLSAPNTPNQLVTTLNIV
                     IVLTILALAPSIVFVMTSFLRLIVVFSFLRQAMGTQSMPPNTILVTLALILTFFIMEP
                     VATKSYNEGIKPYLAEKIGYEEAFIKGAKPFKDFMLKNTREKDLALFYRIRNLPNPKT
                     IDDVPLTVLVPAFMISELKTAFEIGFLIYLPFLVIDMVVSSVLMAMGMMMLPPTMISL
                     PFKLLIFVLVDGWNLLVQRLVESFVT"
     gene            2997..4286
                     /gene="glmU"
                     /locus_tag="RJ239_001420"
     CDS             2997..4286
                     /gene="glmU"
                     /locus_tag="RJ239_001420"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HDV7331528.1"
                     /translation="MKTSILILAAGLGTRIKSQKPKVLQELCQKSMILHILKKAFALS
                     DDVSVVLSHQKERVEKEILEYFPKTQILEQDLQNYPGTAGALSGFEPKNERVLILCGD
                     MPLVEQTSLEALLGNNAKLNLAVFKARDPKSYGRVVIKNDSVEKIVEFKDANTQEKEI
                     NTCNAGVYVIDSRLLKELLPLIDNNNAAKEYYLTDIVKLAKEKDVMIKAVFVDEDEFM
                     GINDKFELSIAENFMQKKIKKYWMQQGVIFHLPQSTFIGADVEFVGECEVYENVRIEG
                     KSKIINSIIKSSSVIENSIVENSDVGPLAHLRPNCELKNTHIGNFVECKNAKLNTVKA
                     GHLSYLGDCEIDSGTNIGCGTITCNYDGVKKHKTIIGKNVFVGSDTQFIAPVKIEDEV
                     IIAAGSTVSINVEKGALFINRAGHKMIKDYYYKKFQK"
     gene            4283..5437
                     /gene="coaBC"
                     /locus_tag="RJ239_001421"
     CDS             4283..5437
                     /gene="coaBC"
                     /locus_tag="RJ239_001421"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HDV7331529.1"
                     /translation="MKTILLAISGSIAFYKSYELISLFKKEGFRVKVLLSNGLLKFAS
                     KMSFEALVDEVLCEENESWQNSNNHIAFSKDVDLVLFAPASVNSINKLAFGIADNLFI
                     QTLIAANKSLIIAPAANTNMFHHFSTQNSLKMLKENKALIIEPICKVLACKDEGVGAL
                     AEVKNIFNIVKRELLKEKFWCDKSVVITGGSTKEKIDDVRCVSNFSSGKMAKAIADAF
                     YFLGARVKLLSSVEFDTPYELCKFESSKDLKELLDKNLNHDFLIMTAAVSDFIPQSVK
                     GKIKKNEHLQGLNLHLSLNEDLLKTCKFQGKKIGFKMEFDSQNALENAKKSLKDKQLD
                     MVCLNIIDQKNYFGSDQNELYFITLNNENKSTLQSKEKLAFELVKWCEKL"
     gene            5434..6051
                     /locus_tag="RJ239_001422"
     CDS             5434..6051
                     /locus_tag="RJ239_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331530.1"
                     /translation="MSMINSTLPIQMKVLAKSGYGHYTLLLNHKKIQTKSMIELEIGA
                     EYLAELYMQNGGVIQFKHLSKRPNFKPFEEGLALIIAILEDKISYKKFIIQNLLDCKD
                     IERYQILKEMLFASFENIYHIPFNFENKSCLFQMRKRAKYLEIYLYFSVFGALKILID
                     SQGISVFTPFAKVQKFLNEHLDFNVSQENKIEPLFVFKRLFDFKG"
     gene            6055..6723
                     /gene="uppS"
                     /locus_tag="RJ239_001423"
     CDS             6055..6723
                     /gene="uppS"
                     /locus_tag="RJ239_001423"
                     /EC_number="2.5.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-trans,poly-cis-decaprenylcistransferase"
                     /protein_id="HDV7331531.1"
                     /translation="MNELKHLAVVMDGNRRWARAKGFLAKLGYSQGVKTMQKLMEVCM
                     EENISNLSLFAFSTENWKRPKDEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDLSRL
                     EDKVREKITLVEEKTKHCDALCVNLAISYGARDEIIRAAKRVIEKKLELNEENLTQNL
                     DLPLDVDLMLRVGNAKRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRER
                     TFGK"
     gene            6720..7496
                     /locus_tag="RJ239_001424"
     CDS             6720..7496
                     /locus_tag="RJ239_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HDV7331532.1"
                     /translation="MIFFIIILGACLGSFCTSLASRIIEKKLFFISRSFCFSCDTKLK
                     YYEIIPIFSYIFLKAKCQTCKCHLSISLLINEILGAILLILVYSLSQNFYDFLFLSLF
                     LFNLFLLSLIDIKLKAVPQILLWSAFLFAFFYAFRESEILHFLIFKEFSGGFLLNAFS
                     FGGFVFLLKSLVFFLMNFQKKDEILENLGDADIIIMSCIGGILGFEYGFLVLFIASIL
                     TLPFFIFFRIKAIKEQELAMIPFLNIAFVAVLFYKNLGLF"
     gene            7496..8521
                     /locus_tag="RJ239_001425"
     CDS             7496..8521
                     /locus_tag="RJ239_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HDV7331533.1"
                     /translation="MKLSLRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEI
                     SFLDLLKLYGFMLPRILIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKF
                     FLKIASLISAFMLVVALVMIPIVFELQDNFVNYKSTQVKFNYKTGEFGQKFLDWMIFI
                     EKQDSDKYENIIMYRPKHKADDKEQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQS
                     IFSGEFDTLVVNTQFNTDNLQTKKFYEYWNDLNENPQRAREFVIYTTIALFPLASTLF
                     ALCFGLVTYRYEKGYVYLGMFGVIAIYFGLLSSFSQPPILACLGIFSLSLFVSAYCFK
                     KMILSRY"
     gene            8518..9243
                     /gene="truA"
                     /locus_tag="RJ239_001426"
     CDS             8518..9243
                     /gene="truA"
                     /locus_tag="RJ239_001426"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HDV7331534.1"
                     /translation="MMKIKIIFSYDGSAFLGSATQPHKKGVQDALSGALSHLGIFSPL
                     LMASRTDKGVHASYAVASVECGDYFTNLEYLQKQLNKFSHPFIHIKKIEKVKDDFEVR
                     FDVKSREYRYIFSHASYSPFMASYVHFYPKFDLGKANELLGFFVGKKDLKFFCKSGGD
                     NKTTLREIFIARAYAYKDFSIFHFKANGFLRGQIRLSVASVLKVLEGKMSEKELKEQI
                     EAKKQYNHFLAPPNGLYLSRICY"
     gene            complement(9240..10451)
                     /locus_tag="RJ239_001427"
     CDS             complement(9240..10451)
                     /locus_tag="RJ239_001427"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="HDV7331535.1"
                     /translation="MLELNKIYKAKQQISGFVNKTPFIYSSFLSDICQSEIYLKNENL
                     QITGAYKIRGAYNKIANLSTEQKQHGVIAASAGNHAQGVAISAKKFSIKAVIVMPEST
                     PLLKVSATKALGAEVILRGDNFDEAYAFATSYAKENNLSFIHPFEDEFVMAGQGTLML
                     EMLDEISDLDMIIAPVGGGGLISGISSTAKQINPNIKIIGVGAKGAPAMYESFHAKKI
                     KNAKSVRTIADGIAVRDANPINFNIILECVDDFIQVDDEEIANAVLFLLEKHKIIVEG
                     AGAASVAALLHQKINTQNHKKIGVVLSGGNIDAQMLNIIIEKGLFKSYRKMQIYVTLV
                     DKPGALLHLTDSLKIANANIVKIDYDRFSTKLDYGDAMISITLETKGKEHQEEIRKIL
                     TQKAFNFYESF"
     gene            complement(10451..>10723)
                     /locus_tag="RJ239_001428"
     CDS             complement(10451..>10723)
                     /locus_tag="RJ239_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HDV7331536.1"
                     /translation="YPKEEFILNEKVYRNLDQIEEKIDTLILFRKGEVALEILPKLVE
                     KNIKNLWLQLDISNETAKEECKKLDINFIQNRCIMLEYPYFKTKEK"
BASE COUNT         3627 a         1347 c         1898 g         3851 t
ORIGIN      
        1 tggttatggt gtaagtggaa cgcaatggat ggactttaat gagccaagca atagaatgaa
       61 tattacaggt ttaaaagatt tttcaaattc tttaatttca aatgtttata aaacccctga
      121 acaagcaaaa gaagctgatg aaatttgact tgattcagga tgtatgatca aaggattatc
      181 atctgagact ttaggtttat ccttagaaga aatcaaaaat gtttctagag gtgaagattg
      241 gcaatttaat cctgatatgt cagtttatcc acaaaatgaa gatggaagct attctaaaga
      301 aactttgttt atgagttttt taaaagctca aggtggacaa cctgttgaga gtctaaaaac
      361 cacacttaat ccaaaattag aagcttacaa gagggctatg gctaaagaga gttttagtgg
      421 tcctgcaatt aacattgata gtattatgac aggtaaaagt gactttaaaa gcttttttag
      481 atactgggca gagcgtggca tagaaggtga tttatatatg tatgaaaata acatttctaa
      541 agaatctgct atgggtaatt gggctttaga tgctgagatt aaacaagctc ttgctaatgg
      601 ttggaaagca aaacctagca ctattgattc ctacgctgat tctataatgg atagattaaa
      661 taatcttttg ggacaaacta gggtttagga agtattaatt ttttaagttt gaaataaatt
      721 gctaataaca aaataagata aaactagtat aattttttta caaaaaaaat tgaaaggaaa
      781 ttatgaaaaa aattattttg atttttatct ctttttttgc tttaaatttg agtgcaaaag
      841 atttggttgt aggaatggag cttggatatc cgccttttga aatgagcgat aaaacaggca
      901 aagcaagtgg aattagcgtg gattttttag aagcttttgc aaagaaaaac ggctataaac
      961 ttgtagtaaa aaatatcgct tgggatggtt taatacctgc tttaaaaaca gccaagatag
     1021 atcttattat gtcctctatg acaattaccg ataagagaaa gaaagtggtg gattttagca
     1081 ttccttatgc taaggcaaat ttggctattt taactccttt gaactctgat attacaaata
     1141 tcaaagattt agataaaaag ggcaaagttt tggctttaaa gcgtggttct acagggcatt
     1201 tatatgcggt taaaaattta aaaaatgcaa ctattaattt atttgataaa gaaaatgctg
     1261 ctattttgga agtgattcaa ggcaaggctg atggattttt ttatgatcaa cttacgattt
     1321 atcggacttg gcaaaagcat caagatacaa ccagagccat tttagcgcct tttcaagaaa
     1381 atcctgagtt ttggggtata gctgtaagaa aaggtgatga agctttaaag gacaagcttg
     1441 ataatttcat tgatgagagt aggaaaaatg gctttttaga ttttttgggc aataagtatt
     1501 taaaagacat taaagaagtt tttaagcaaa ataatatcac ttttttcttg taggctttta
     1561 ataaaatatt gataattaat attaatttta tgaattttga tatacaatat cattatctaa
     1621 attttaaata aaaggattta agataatgaa aaaagttgca ttttttttgt tatttttgtt
     1681 tttatcttgc actgtactaa acgcagctag ggagtattgc aaatatgctt atcaagaaga
     1741 tagagctata cctttaattt taaattatgg aataagattg ggggtagtag gtgctggggt
     1801 tgcgaatgca cctgcaccgg gcggaagtac ttacaattca aaaattgaca tgatggctgc
     1861 aagatgccac taagcttagt ttttgggtgt attttacaat gctagaattt atttttactc
     1921 ttattttaga ttttactttt tattctatca agaccctaga aaaagtcttt ctagggcgaa
     1981 cagccttagt aattcttttt gttgttttta tagctctttt ttgcgttaaa ggcttgtttt
     2041 tgtatatact tttagcttta gaattatttt tgcttttgta tctttttctt ggaattttgt
     2101 ttttaagatt ttataaatct taggttacaa agctttccac aagcctttgc actagcaaat
     2161 tccatccatc cactaataca aaaattaaga gtttaaaagg taaagagatc atagtaggag
     2221 gtagcatcat catacccata gccattaaaa ctgagcttac aaccatatct atgactaaaa
     2281 agggtaggta gattaaaaac cctatttcaa aagcggtttt aagctctgaa atcataaaag
     2341 caggaactaa aaccgtaagg ggaacatcat ctatggtttt gggattgggt agattgcgta
     2401 tgcgataaaa aagggctaaa tctttttcgc gagtattttt aagcataaaa tctttaaaag
     2461 gctttgctcc ttttataaaa gcctcttcat agcctatttt ttctgctaaa taaggtttta
     2521 taccttcatt ataggatttt gtagctacag gttccatgat aaaaaaagtt aaaattaaag
     2581 ccaaggttac taaaatggta ttaggtggca tactttgcgt ccccatagct tgtcgcaaaa
     2641 atgaaaatac tacaataaga cgcaagaaag aagtcataac aaaaactata cttggagcga
     2701 gcgcaagtat ggttaaaaca atcactatat ttaaagtagt aacaagctga ttaggtgtat
     2761 tgggtgcact taagcttaaa tttactgtag ggatagttgc ttcagcagca aataagctca
     2821 tgcttaaaag taaaaataat aatatttttt tcaaaattta aaaacctttt tttgtttttt
     2881 actaaagaaa tttaaatttt atcttttgat gactaaaaac tagtttaagg gtattaggat
     2941 tttaacttta aactgctaaa atagtctttt agacttctta ataacaaagg taaaaaatga
     3001 aaacttctat tttgatttta gcggcaggat taggcactag aataaaatca caaaagccaa
     3061 aggttttgca agagctttgt caaaaaagta tgattttaca cattttaaaa aaggcttttg
     3121 ctttaagtga tgatgtaagt gtagttttat cgcatcaaaa agaacgcgtt gaaaaagaaa
     3181 ttttagaata ttttccaaaa acacaaattt tagagcaaga tttgcaaaat tatccaggaa
     3241 ctgcgggagc tttaagtggg tttgagccta aaaatgaaag agtgttgatt ctttgtggtg
     3301 atatgccttt ggttgagcaa acaagtttgg aagctttgtt gggtaataat gcaaaattaa
     3361 atctagcagt ttttaaagca agagatccta aaagttatgg tagggtggtg ataaaaaacg
     3421 atagcgttga aaaaattgtt gaatttaaag atgcaaatac gcaagaaaaa gagataaata
     3481 cttgcaatgc tggggtttat gtgattgact cgaggctttt aaaagagctt ttacctttga
     3541 ttgataacaa taatgcggca aaagagtatt atttaaccga cattgtaaaa ctagcaaaag
     3601 aaaaagatgt gatgattaaa gcagtttttg tagatgaaga tgaatttatg gggattaatg
     3661 ataaatttga actcagtata gctgaaaatt tcatgcaaaa aaaaattaaa aaatactgga
     3721 tgcaacaggg tgtgattttt catttaccgc aaagcacttt tataggtgca gatgttgaat
     3781 ttgtaggtga atgtgaagta tatgaaaatg taaggataga gggcaaaagt aagattataa
     3841 actctatcat taaaagttca agcgtgatag aaaattccat cgtagaaaat agcgatgtag
     3901 ggcctttggc acatttgcgt ccaaattgtg agttaaaaaa cactcatata ggaaattttg
     3961 tagaatgcaa aaatgcaaag ttaaataccg taaaagcagg gcatttgagc tatttaggag
     4021 attgtgagat agatagtgga accaatatag gctgtgggac tatcacttgt aattatgatg
     4081 gggtaaaaaa gcataaaacc atcataggaa aaaatgtttt tgtaggttct gatacgcaat
     4141 ttatcgcacc tgtaaaaatc gaagatgaag taatcatagc agcaggaagc acagtaagta
     4201 tcaatgtaga aaagggtgct ttgtttatca atagagcagg gcataaaatg ataaaagatt
     4261 attattataa gaaatttcaa aaatgaaaac catactttta gccattagcg gtagtatagc
     4321 tttttataaa tcttatgagc ttatttcttt gtttaaaaaa gaaggcttta gggtaaaagt
     4381 tttgctttct aatggtttgt taaaatttgc tagcaaaatg agttttgaag ccttggttga
     4441 tgaagtttta tgtgaggaaa atgaaagttg gcaaaattca aacaatcaca tagcttttag
     4501 caaggatgta gaccttgttt tgtttgcccc tgcaagtgtt aattctatca ataaacttgc
     4561 ttttggtata gcggataatc tttttatcca aaccttaatc gcagcaaata aatctcttat
     4621 catagctcct gcggcaaata caaatatgtt tcatcatttt agcacgcaaa attctttaaa
     4681 gatgcttaaa gaaaataaag ctttgattat agagcctatt tgtaaagttt tagcttgtaa
     4741 agatgaaggc gtaggagcct tagctgaagt taagaatatt tttaatatcg tcaaaagaga
     4801 acttttaaaa gaaaagtttt ggtgcgataa aagtgtagtt atcacaggtg gcagcacaaa
     4861 agaaaagatc gatgatgtgc gttgtgtgag taatttttca agtggaaaaa tggcaaaggc
     4921 catagctgat gctttttatt ttttaggagc tagggtaaaa cttttaagct ctgtggaatt
     4981 tgatacgcct tatgagcttt gcaaatttga aagttctaag gatctaaagg agcttttgga
     5041 taaaaattta aatcatgact ttttgattat gacggctgcg gtaagtgatt ttatccctca
     5101 aagtgtaaaa ggaaaaatta aaaaaaatga gcatttacag ggtttaaatt tgcatctatc
     5161 tttaaatgaa gatttgctta aaacttgcaa atttcaaggc aaaaagatag gttttaagat
     5221 ggaatttgat tctcaaaatg ccttagaaaa tgcgaaaaaa tctttaaaag ataagcaact
     5281 tgatatggtt tgtcttaata tcattgatca aaaaaattat tttggaagcg atcaaaatga
     5341 gctttatttt atcactttaa acaatgaaaa taaaagcact ttgcaaagca aagaaaaatt
     5401 ggcatttgaa ttagtaaaat ggtgtgaaaa attatgagta tgattaattc taccttacct
     5461 atacaaatga aagttttagc taaatcaggt tatggacatt atacgctttt attaaatcat
     5521 aaaaagattc aaaccaaaag catgatagag cttgaaattg gtgctgaata tttagctgaa
     5581 ctttatatgc aaaatggtgg agttatacaa tttaaacatc tttcaaagcg tcctaatttc
     5641 aaaccttttg aagagggatt ggctttgata atcgctattt tagaggataa aatttcttat
     5701 aaaaaattca ttatacaaaa tcttttagat tgtaaagata tagagcgtta tcagatatta
     5761 aaagaaatgc tttttgcaag ttttgaaaat atttatcata ttccttttaa ctttgaaaat
     5821 aaatcttgct tgtttcaaat gcgtaaaaga gcaaaatatt tagaaattta cttatatttt
     5881 agcgtttttg gagctttaaa aattttaata gactcgcaag gcattagtgt ttttacacct
     5941 tttgccaagg tgcaaaaatt tttaaacgaa catttagatt ttaatgtatc tcaagaaaac
     6001 aagattgaac ctttgtttgt tttcaaaagg ctttttgatt ttaaaggatg aaaaatgaat
     6061 gaattaaaac accttgctgt tgttatggat ggcaataggc ggtgggctag agctaagggt
     6121 tttttggcaa agcttggata ttcccaagga gtcaaaacta tgcaaaaatt gatggaagtt
     6181 tgcatggaag aaaatatttc aaatttaagc ctttttgctt ttagtacgga aaattggaag
     6241 cgtcctaaag atgaaattga ttttatcttt gaacttttag atcgttgttt agatgaagct
     6301 ttagaaaaat ttgaaaaaaa taatgtgcgt ttaagagcta taggtgattt atcgcgcttg
     6361 gaagataaag taagagaaaa aattacctta gttgaagaaa aaacaaagca ttgtgacgca
     6421 ctttgtgtta atttggctat aagttatggt gcaagagatg agattataag agctgctaag
     6481 cgtgtgattg aaaaaaaact tgagctaaat gaagaaaatt taacgcaaaa tttagattta
     6541 cctttagatg tggatttgat gcttcgcgtt ggaaacgcta aaagactttc aaatttctta
     6601 ctttggcagt gttcatatgc tgaaatttat tttagtgaaa ctttatttcc atctcttacc
     6661 aagagagaat ttaaaaggat tattaaagaa tttagaaata gagaaagaac ttttggaaaa
     6721 tgatattttt cataataatt ctaggggctt gtttgggttc tttttgcaca agtttggcaa
     6781 gtaggataat tgaaaaaaaa ctctttttta tctcgcgctc tttttgtttt tcttgtgata
     6841 caaaattaaa atactatgaa attattccta ttttttctta tattttttta aaggcaaaat
     6901 gtcaaacttg taaatgtcat ttgtctattt ctttgttaat caatgaaatt ttaggcgcaa
     6961 ttttgcttat tttggtttat tctttaagtc aaaattttta tgatttttta tttttatctc
     7021 tatttttatt taatcttttc ttactttctt tgattgatat taaactcaaa gccgtaccac
     7081 aaattttact ttggagtgct tttttatttg ctttttttta cgcctttagg gaaagtgaaa
     7141 ttttacattt tttgattttt aaagagttta gtggaggttt tttactaaat gcttttagtt
     7201 ttggaggatt tgttttttta ttaaaaagtt tggttttttt tctaatgaat ttccaaaaaa
     7261 aagatgaaat tttagaaaat ttgggtgatg ctgatattat tattatgtct tgtataggtg
     7321 gaattttagg ttttgagtat ggatttttag tattatttat agcttctatt ttgactttgc
     7381 ctttttttat tttttttaga attaaagcaa taaaagagca agaacttgct atgataccct
     7441 ttttaaatat cgcttttgtg gcagttttat tttataaaaa cttaggatta ttctaatgaa
     7501 gcttagttta agatatgttt taaatcaatt tttaagtacg aatttgtcta tatttttcgt
     7561 actttttgct attgtatcta tggtgttttt tattcaactt gcaaaactta cttcaagtat
     7621 agagattagt tttttggatc ttttaaagct ttatgggttt atgttgccta gaattttaat
     7681 ttttaccttg cctatatctt tttttatttc tttaactttg gctttgttta ggctttctaa
     7741 ggaaaatgaa agcatagtgc tttttacttt gggattttca ccaatgattt tggcaaaatt
     7801 tttccttaaa attgcaagct tgattagtgc ttttatgctt gttgtagctt tggtaatgat
     7861 acctatagta tttgaacttc aggataactt tgtaaactat aaaagcactc aagtgaaatt
     7921 taactacaaa acaggagaat ttggacaaaa atttttagac tggatgattt ttatagaaaa
     7981 acaagatagt gataagtatg aaaacataat tatgtatcgc cctaaacata aagcagatga
     8041 taaagaacaa cttatcatag ccaaagaagc gcatgtgcaa agaaaagatg atagctttgc
     8101 ttttagctta aatcaaggca aaatgtataa ttttgagcaa ggtcaaagta tttttagtgg
     8161 agaatttgac actttagtag taaatactca gtttaataca gacaatcttc aaacaaagaa
     8221 attttatgaa tactggaatg atttaaacga aaatccacaa agagcaagag aatttgtgat
     8281 ttatacaact atagccttgt ttccacttgc tagtacgctt tttgcgcttt gttttggttt
     8341 ggttacttat cgttatgaaa aaggctatgt gtatttaggt atgtttggag tgattgctat
     8401 atattttgga cttttaagtt ctttttctca acctccaatt ttggcttgtc ttggaatttt
     8461 ttctttaagt ttatttgttt cggcttattg ttttaagaaa atgattttga gtcgatattg
     8521 atgaaaataa aaattatatt ttcttatgat ggctctgctt ttttaggttc tgctactcag
     8581 cctcataaaa aaggtgttca agatgcttta agtggggcct tatcgcattt gggtattttt
     8641 tcacctcttt tgatggcttc tcgtacagat aaaggagtac atgcaagcta tgctgtagct
     8701 agtgtggagt gtggagatta ttttacaaat ttagaatatc ttcaaaaaca acttaataaa
     8761 ttttcccatc cttttatcca tatcaaaaaa attgaaaaag taaaagatga ttttgaagta
     8821 agatttgatg taaaaagtag agaataccgc tatatatttt ctcacgcttc ttatagtcct
     8881 tttatggctt cttatgtaca tttttatcct aaatttgacc taggtaaagc taatgaactt
     8941 ttgggttttt ttgtaggaaa aaaggattta aagttttttt gcaaaagtgg aggggataat
     9001 aaaacgactt taagagaaat ttttattgct agagcttatg cttataaaga ttttagcatt
     9061 tttcatttta aagctaatgg ttttttaaga gggcaaatta gattaagcgt agcaagcgtt
     9121 ttaaaagttt tagaaggaaa aatgagtgaa aaagaactca aagaacagat tgaggctaaa
     9181 aagcaataca atcacttttt agcaccgcca aatgggcttt atttaagccg tatatgttat
     9241 taaaaacttt catagaaatt aaaagccttt tgggttaaaa tttttcttat ttcttcttga
     9301 tgttctttac ctttggtttc tagagtaatt gaaatcatcg catcgccata atcaagcttg
     9361 gtagaaaatc tatcatagtc gatttttact atatttgcat tggctatttt taagctgtct
     9421 gtaaggtgta ataatgcccc aggtttatct actaaagtaa cataaatttg catttttctg
     9481 taagatttaa ataaaccttt ttctatgatg atatttagca tttgtgcatc gatattgcct
     9541 ccgcttaaaa ctacgccaat ttttttatga ttttgtgtat ttattttttg atgaagcagg
     9601 gcggctacac tcgcagctcc cgcaccttcg actatgattt tatgtttttc gagtaaaaac
     9661 aataccgcat tagctatttc ttcatcatca acttggataa aatcatctac acattctaag
     9721 ataatgttaa aatttatagg atttgcatca cgcacagcaa taccatcggc tatagtgcgt
     9781 acgctttttg catttttgat ttttttagca tgaaaacttt catacattgc aggagctcct
     9841 ttggctccaa ctccgatgat tttaatgtta ggattgattt gtttagctgt acttgagata
     9901 ccgcttataa gtcctccgcc tccaacaggt gcaataatca tatcaagatc gcttatttca
     9961 tcaagcattt caagcattaa agttccttgt cctgccatta caaattcatc ttcaaaagga
    10021 tggataaagc taagattatt ttctttagca taagaggttg caaaagcata ggcttcatca
    10081 aaattatctc ctctgagtat cacctctgct cctaaggctt ttgtagcaga aacttttaag
    10141 agtggagtgg attctggcat tacgataact gctttaatgc taaatttttt tgcactaatg
    10201 gccacgcctt gagcatggtt tcccgcactt gctgcaatga ctccatgttg tttttgttca
    10261 gtgctaagat tggctatttt attgtaagct ccacgaattt tataagcacc tgtaatttgt
    10321 aaattttcat ttttaagata aatctcactt tgacaaatat cacttaaaaa agaagagtat
    10381 atgaaaggag ttttgtttac aaatcctgaa atttgttgtt ttgctttgta aattttatta
    10441 agctctaaca ctatttttcc tttgttttaa aatacggata ttctagcata atgcaacgat
    10501 tttgtataaa atttatatct aattttttac attcttcttt ggctgtttca ttactaatat
    10561 caagttgaag ccataggttt ttaatatttt tttcaacaag cttaggaaga atttctagcg
    10621 ccacttcacc ttttctaaaa agtataagtg tatcgatttt ttcttctatt tgatctaaat
    10681 ttctataaac tttttcattt aaaataaact cttctttagg ata
//
LOCUS       DAPIVO010000057        10479 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.057, whole genome shotgun sequence.
ACCESSION   DAPIVO010000057 DAPIVO010000000
VERSION     DAPIVO010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10479)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10479)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10479
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.057"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            230..502
                     /locus_tag="RJ239_001429"
     CDS             230..502
                     /locus_tag="RJ239_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HDV7331537.1"
                     /translation="MMPFSDEELINPVKASLEKSLPMLERDGGGLEFLGIKNGIVYVH
                     LIGACKGCASSGTTLKYGLERQLKIDIHPEITIINLNGGADEFAKL"
     gene            489..1040
                     /locus_tag="RJ239_001430"
     CDS             489..1040
                     /locus_tag="RJ239_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HDV7331538.1"
                     /translation="MQNYKKLGIEHFYKKDFKTAKMYFSMAYEKRKNKRLLNFICLCD
                     LALKSPKEASLLFDFYIEHYKISSIDKDLEEILSTIEFKKQENKQENEFEDGHALNYQ
                     DFLKSEEELGFQKSFENIINSTKLVIDNRDDFLDFLEKLLDNGYKDMTLNYIENVMPH
                     FWANDRFIKLQEKLMGFKSEIKT"
     gene            1024..2307
                     /locus_tag="RJ239_001431"
     CDS             1024..2307
                     /locus_tag="RJ239_001431"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HDV7331539.1"
                     /translation="MKLKLENSFITDNTLECEKECFFLQTTQNAKFHAQALEKGAKII
                     DVNECKKLLKIDEKIQIIGITGTNGKTTTAAAIYSILLDLGYKCGLCGTRGAFINDEQ
                     IDEKSLTTSPILKTLEYLQIATQKKCDFFIMEVSSHALVQNRIEGLNFAAKIFTNITQ
                     DHLDFHGTFENYKEAKELFFTDESLKFINKDALAIKFNVRNAFTYGIENPALYQIKAY
                     SLEEGISTIVTNKNQTFHIDSPLLGLFNLYNLLVASACVNELVKPDLKDLEKAISGFG
                     GVCGRVEQVAKGVIVDFAHTPDGIEKVLDTLKNKKLIVVFGAGGDRDKTKRPLMGKIV
                     EHFAKIAIITSDNPRSEEPKTIMEEILSGFTKKEKVLMIEDRKEAIKKALELKENDDL
                     VVILGKGDETTQEIKGIKYPFSDKVVVNEILKNQG"
     gene            2311..2622
                     /locus_tag="RJ239_001432"
     CDS             2311..2622
                     /locus_tag="RJ239_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HDV7331540.1"
                     /translation="MFENMDFSKMGELLNQVQEKAKNIELELANREFSAKSGAGLVKV
                     SANGKGEIIDVSIDDSLLEDKESLQILLISAINDVLAMVAQNRSSMANDVLGGFGGMK
                     L"
     gene            2619..3713
                     /locus_tag="RJ239_001433"
     CDS             2619..3713
                     /locus_tag="RJ239_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HDV7331541.1"
                     /translation="MKKILIICMLFTLSFGIERPKFEDFLAGYERNKASMLNYEGMPA
                     FALSENLLAVLKQPNAKLNKYVKYDPFLNLYLVRTDFSLIPTPMGDEEKLTRNDWVGI
                     WDPNKPYIGHIKYLAQNIDEKDQLDFNSKIGLLGTPCCEMMGIALNNSSFIGNRYLKH
                     FMKYNDVYWGDIGVDFVVRENKIYVNNVRKNPQFLINDQVISVDGLPANDLRKLNEKI
                     LFADRGSTLYFQVLRDNMDLNISTEVFAKDLSKFNLPDSKPKPKITNFTSNLGLTVNA
                     SLVVTKIDPKSKVSNAGFMVGDKILRVNNIILNNFKELQNILSAGNDFSILIERKSTK
                     LPLSNFNNELGGNANSGGDGKFQFFIRLTK"
     gene            3710..4555
                     /locus_tag="RJ239_001434"
     CDS             3710..4555
                     /locus_tag="RJ239_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HDV7331542.1"
                     /translation="MNLKELFIHHLEKNLPKVESFHPFFNEALALMLKAGGKHFRAQL
                     LLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDET
                     TAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDCFFEDKRL
                     SLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDDIIDV
                     TTSQEQSGKPTNNDIHKNSFVNLLGLEQAIKTKENLLSECEQDLEKLNEKLAQMIQNL
                     IIQYL"
     gene            4566..6464
                     /gene="tkt"
                     /locus_tag="RJ239_001435"
     CDS             4566..6464
                     /gene="tkt"
                     /locus_tag="RJ239_001435"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HDV7331543.1"
                     /translation="MNIQILQEQANTLRFLSADMVQKANSGHPGAPLGLADILSVLSY
                     HLKHNPKNPTWLNRDRLVFSGGHASALLYSFLHLSGYDLSLEDLKNFRQLHSKTPGHP
                     EISTLGVEIATGPLGQGVANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGIS
                     YEACSLAGLHKLDNFILIYDSNNISIEGDVGLAFNENVKMRFEAQGFEVLSINGHDYE
                     EINKALEQAKKSTKPCLIIAKTTIAKGAGELEGSHKSHGAPLGEEVIKKAKEQAGFDP
                     NISFHIPQASKIRFESAVELGDLEEAKWKDKLEKSAKKELLERLLNPDFNKIAYPDFK
                     GKDLATRDSNGEILNVLAKNLEGFLGGSADLGPSNKTELHSMGDFVEGKNIHFGIREH
                     AMAAINNAFARYGIFLPFSATFFIFSEYLKPAARIAALMKIKHFFIFTHDSIGVGEDG
                     PTHQPIEQLSTFRAMPNFLTFRPADGVENVKAWQIALNADIPSAFVLSRQKLKALNEP
                     VFGDVKNGAYLLKESKEAKFTLLASGSEVWLCLESANELEKQGFACNVVSMPCFELFE
                     KQDKAYQERLLKGEVIGVEAAHSNELYKFCHKVYGIESFGESGKDKDVFERFGFSVSK
                     LVNFILSK"
     gene            6466..7575
                     /locus_tag="RJ239_001436"
     CDS             6466..7575
                     /locus_tag="RJ239_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7331544.1"
                     /translation="MNTNFKFQNNTLFIFGIWDKTSIYKLKIKDFLALIQSKEVIFDF
                     KDLKAIDTAGVRFFLALENDLKNKNIKITKEGLNSRFQTLFELCEKNYQRLGKTKKSH
                     QNFSEYFIDLGKLSLELLKILRKFINFTGAFFTSLFLCLKNPKNFRFIAFLYHIENSA
                     FKALPIVILTALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAG
                     RSASSYTAQIGVMKITDEIAAMNTMGFRSFEFIVIPRVMALVVAMPLIVAISDAISII
                     GGMMVAKLNLDISFAEFLRRFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNT
                     TQSIGIYTTKSVVNAIFWVIAFDALFSVILTSTGI"
     gene            7576..8298
                     /locus_tag="RJ239_001437"
     CDS             7576..8298
                     /locus_tag="RJ239_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7331545.1"
                     /translation="MVIKAQNIITKFGEKIVHDGVSFEIKKNEIFGILGGSGSGKSVL
                     LKQMLMLEHFDDGEYEILGYKLKNINEEDALALRKKWGVVFQFAALFSFFNVYENIAI
                     PLKEYTHLDENSIQELVLMKLKMVGLNESVLKQFPSELSGGMQKRVAIARALALDSKL
                     LFLDEPTSGLDPHSSREFDDLVLELKKSFDLNIILVTHDKESMKNLLDRFIILENKKV
                     GFCGTYEELRLQNERLFKRFME"
     gene            8301..9191
                     /locus_tag="RJ239_001438"
     CDS             8301..9191
                     /locus_tag="RJ239_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCE family protein"
                     /protein_id="HDV7331546.1"
                     /translation="MENRANYFFVGLFVFGVFFASLGFILWLGGYSKEESFKYYEIHT
                     QESVAGLGIKAPVRLLGVEVGSVEEISIYNQDELGVNIRIKVKNNTPIKEDTFATLQL
                     QGITGLKFIQLQGGSKNSKDLVSMQGKLPVIPFKESFLATIDRQSEHIFSLVKTADDK
                     SKELLSEKNLKNLEILLQNLAELSANLNANSKNLSLNLSNASLKIGKMADNISLSAQN
                     FNSSLKNIKESTMILKNFIKKADEKLNTYDDIKASLMQNLELFKRVLIESNILIENLQ
                     NSPADLIFKETKPKLGPGEK"
     gene            9191..9790
                     /locus_tag="RJ239_001439"
     CDS             9191..9790
                     /locus_tag="RJ239_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7331547.1"
                     /translation="MLKQLFCILTFIFMLCGCSLRHETINKNENIILKDEGIDSNIFF
                     KKTGKILKIRNANAPLYLNSRAIVYIDNGFSNKYAHYFWGDLPSNLYSFLILSKFEQS
                     NIFTTLLSSTSSLSADYSLESRINSFEQILNNNENYAQISISVNFINLENNQIIAHKI
                     FNTKEKIEKKDIRSTYNAFQKALNKIGNEIVFWVNSNLS"
     gene            9846..10346
                     /locus_tag="RJ239_001440"
     CDS             9846..10346
                     /locus_tag="RJ239_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331548.1"
                     /translation="MKSDLDIFKKHLGEIQGVNEFKANQICSQINDANDFIGALQVLD
                     MSLKKIEKSILERIDENSDDMQKRTLDATASQLIQNCSFMGTALFGNIFNVYVGKKLF
                     EFEIANPLLILQTSNYEGVLAYIQDKRDEIKIILSELSTAITMGETMDNAGIYNSTMD
                     FKNLFK"
BASE COUNT         3878 a         1509 c         1774 g         3318 t
ORIGIN      
        1 aaaagaatat ttaagcttct taaaacatga aaaaaacgaa gaaattctgc aacaatcatt
       61 tagaaactta aatggaattt ttggtaacaa aaactttaca gcttatgatt taggatttag
      121 catacaaaat aatgacgaac ctttttaatt tatttaaatt tcaagcctta atttaccttt
      181 ttttaaacac aatcacgcta aagtatataa aaatttttaa ggataaatta tgatgccttt
      241 tagtgatgaa gagcttataa atcctgttaa agcaagttta gaaaagagct tgcctatgct
      301 tgaacgtgat ggcggagggc ttgaattttt aggaattaaa aatgggatcg tttatgtcca
      361 tttaatagga gcttgtaaag gctgtgcatc gagtggaaca acgctaaaat acggtcttga
      421 aaggcaactt aagattgata ttcatccgga aatcactata atcaatttaa acggcggagc
      481 agacgaattt gcaaaattat aaaaaacttg gaattgaaca tttttacaag aaagatttta
      541 aaactgcaaa aatgtatttt tctatggctt atgaaaaacg caaaaataaa cgcttgctaa
      601 attttatctg cctttgtgat cttgctttaa aatctcctaa agaagcttct ttactttttg
      661 atttttatat agaacattac aaaatctcta gcattgataa agacttagaa gaaattttaa
      721 gtacaattga atttaaaaaa caagaaaaca aacaggaaaa cgaatttgaa gatgggcatg
      781 cgttaaatta tcaagatttt ttaaaaagcg aagaagaact tggctttcaa aaaagttttg
      841 aaaatatcat taacagcact aaattagtta ttgataatcg tgatgatttt ttagattttt
      901 tggaaaaatt acttgataat ggctataaag atatgacttt aaattacata gaaaatgtta
      961 tgcctcattt ttgggcaaat gatagattta tcaaactcca agaaaaactc atgggattta
     1021 aaagtgaaat taaaacttga aaattcattc attacagata acaccttaga gtgtgaaaaa
     1081 gaatgctttt ttttgcaaac cacacaaaat gctaaatttc acgctcaagc cttagaaaaa
     1141 ggtgcaaaaa tcattgatgt aaatgagtgt aaaaaacttt taaaaatcga tgaaaagatt
     1201 caaatcatag gaatcacagg aaccaatggc aaaaccacaa ccgcagcagc gatttattct
     1261 atcttattgg atttaggtta taagtgtggg ctttgtggga caagaggagc ttttatcaac
     1321 gatgaacaaa tcgatgaaaa atccttaacc acctccccta ttcttaaaac cttagaatac
     1381 ctacaaatag ccactcaaaa aaaatgtgat tttttcatca tggaagtaag ctcacacgca
     1441 ctcgttcaaa accgcatcga aggcttaaat tttgctgcta aaatttttac caatatcact
     1501 caagatcatt tagattttca cggtactttt gaaaattata aagaagcaaa agaacttttt
     1561 tttaccgatg agagtttaaa atttatcaac aaagatgctt tggctattaa atttaatgtg
     1621 cgtaatgctt ttacttatgg catagaaaat cctgctttat atcaaatcaa agcttattct
     1681 ttagaagaag gcattagtac tattgtaaca aataaaaatc aaacttttca catagactcg
     1741 cccttgctag gactttttaa tctttacaat cttctagttg ctagtgcttg tgtgaatgaa
     1801 ctcgtaaagc ctgatttaaa agacttggaa aaagctatca gtggatttgg cggggtttgt
     1861 ggcagggtag aacaagtagc aaaaggtgtg attgtagatt ttgctcatac gcctgatggc
     1921 attgaaaaag tgcttgacac tcttaaaaat aaaaaactca tcgttgtttt tggagcaggt
     1981 ggagatagag ataaaaccaa acgcccttta atgggaaaaa tcgtcgaaca ttttgcaaaa
     2041 attgctatca ttacaagtga caatccacgc agcgaagaac caaaaaccat catggaagaa
     2101 attttatcag gctttactaa aaaagaaaaa gttttaatga tagaagatag aaaagaagct
     2161 ataaaaaaag ctttagaact aaaagaaaat gacgatttag tcgttatttt aggcaaaggt
     2221 gatgaaacta ctcaagaaat taaagggata aaatatcctt ttagtgataa agtagttgtt
     2281 aatgaaattt taaaaaatca aggataatca atgtttgaaa atatggattt ttctaaaatg
     2341 ggagaacttt taaatcaagt tcaagaaaaa gcaaaaaata tagaactaga acttgcaaat
     2401 cgtgaattta gtgccaaaag cggagcagga cttgttaaag taagtgccaa tggaaagggt
     2461 gaaattatcg atgttagcat tgatgattct ttacttgaag ataaagaatc cttgcaaatt
     2521 ttacttattt ctgcaattaa tgatgttttg gctatggttg cacaaaatcg ttcaagtatg
     2581 gcgaatgatg ttttaggcgg ttttggaggt atgaaattat gaaaaaaatt ttaattattt
     2641 gcatgctttt tactttgtct tttggtatag aaagacctaa atttgaagat tttttagcag
     2701 gttatgaaag aaataaggca agcatgctca actatgaagg aatgccagct tttgcactca
     2761 gtgaaaattt acttgctgtg ttaaaacagc ctaatgctaa gcttaacaaa tatgtaaaat
     2821 acgatccatt tttaaattta tatcttgtaa gaactgactt tagcctaatc cctactccta
     2881 tgggtgatga agaaaaactt actcgtaatg attgggttgg aatttgggat cctaataaac
     2941 cttatatagg gcatattaag tatttagctc aaaatattga tgaaaaagat caacttgatt
     3001 ttaattctaa aataggactt ttagggactc catgctgtga aatgatgggg attgctttaa
     3061 ataatagctc ttttataggc aatcgctatt taaaacattt tatgaaatat aacgatgttt
     3121 attgggggga tattggcgtt gattttgttg ttcgagaaaa taaaatttat gttaacaatg
     3181 taagaaaaaa tccacaattt ttaatcaatg atcaagttat aagtgttgat ggcttacccg
     3241 ccaatgattt aagaaaactc aatgaaaaaa ttctttttgc agatcgcgga agcactcttt
     3301 attttcaagt gttgcgtgat aatatggatt taaatatttc tactgaagtt tttgcaaaag
     3361 atttgagcaa atttaacctt cctgattcta aaccaaaacc aaaaattaca aatttcacaa
     3421 gcaatcttgg tttaacggtt aatgctagtc ttgttgtaac taaaatagat ccaaaatcaa
     3481 aagtatcaaa tgcaggattt atggtaggag ataaaatttt acgcgttaat aatattattt
     3541 taaataattt taaagaatta caaaatattt taagtgctgg taatgacttt agcatcttaa
     3601 ttgaacgcaa aagtactaaa ttacctttat caaatttcaa caatgaacta ggcggaaatg
     3661 ccaactcagg tggcgatggt aaatttcaat ttttcataag gcttactaag tgaatttaaa
     3721 agaacttttt atccatcact tagaaaaaaa tctacccaaa gttgaaagct ttcatccttt
     3781 tttcaatgaa gctttagcac ttatgttaaa agcaggagga aagcattttc gcgcacaatt
     3841 gcttttaagc gtagtgcaaa gcaataaacc tgaactttta aatcaagctt tagatgtagc
     3901 tttagctttg gaatttatcc atacttattc actcatacac gatgatttac ccgctatgga
     3961 taatgcggac tttagacgag gaattccaac cttacacaaa agctacgatg aaactacagc
     4021 catcttagta ggtgatgctt taaataccga agctttttta gttctaagtc atgctcattt
     4081 aaaagatgaa atcaaaatca aactcatcaa aacccttgcc tttaatgcag gacttaatgg
     4141 aatggtcata ggacaagcta ttgattgttt ttttgaagac aaaagactga gtttaaatga
     4201 acttgagttt ttgcatacac ataaaaccgc aagattgatc gccgcagctt taaaaatggg
     4261 ttgtgaaatt tgcgaactta acaacgaaga aagcaatcaa atttacaaac ttggtttaaa
     4321 actaggactg atttttcaaa tcaatgatga tattatcgat gtaactacaa gtcaagaaca
     4381 aagcggaaag cctaccaaca acgatattca taaaaattct tttgtcaatt tgcttggact
     4441 tgaacaagcc ataaaaacaa aagaaaatct tcttagtgaa tgcgaacaag acttagaaaa
     4501 acttaatgaa aaactcgcac aaatgataca aaatttaata attcaatact tataaaggca
     4561 aaataatgaa cattcaaatt ttacaagaac aggcaaatac tctaagattt ttaagtgctg
     4621 atatggtgca aaaagcaaac tcaggacacc caggtgcacc tttgggctta gcagatattt
     4681 taagtgtttt aagttatcat ttaaaacaca atcccaaaaa tccaacttgg ctaaaccgag
     4741 atagacttgt attttcaggc ggacatgcaa gtgctttgct ttatagtttt ttacatttaa
     4801 gcggctatga cttaagctta gaagatctta aaaatttccg ccaacttcat tctaaaaccc
     4861 ctggacaccc tgaaatttca actcttggag tagaaatcgc tacaggccct ttaggacaag
     4921 gcgttgccaa tgctgtaggc tttgctatgg cagcaaaaaa agcacaaaat ttgctaggca
     4981 gtgatttaat cgatcataaa atttattgtc tttgcggaga tggggattta caagaaggca
     5041 tttcttatga agcttgttct ttagcaggac ttcacaaact tgataacttc atacttattt
     5101 atgatagcaa caatatctct atagaaggcg atgtaggttt agcctttaac gaaaatgtaa
     5161 aaatgcgttt tgaagcacaa ggatttgaag ttttaagtat aaatggacac gattatgaag
     5221 aaatcaataa agccttagaa caagctaaaa aatccacaaa accttgtctt atcatcgcaa
     5281 aaacaactat agcaaagggt gcaggagagc ttgaaggcag tcataaaagc catggcgcac
     5341 ctttgggtga agaagtgatt aaaaaagcca aagaacaagc aggctttgat ccaaatatca
     5401 gttttcatat cccacaagca agcaaaatcc gctttgaaag tgctgtagaa cttggggatt
     5461 tagaagaagc aaaatggaaa gataagcttg aaaaaagtgc taaaaaagaa cttttagaaa
     5521 ggctattaaa tcctgatttt aacaagatag cttatcctga ttttaaagga aaagatcttg
     5581 ctacaagaga tagtaatggt gaaattttaa atgttttagc taaaaattta gaaggatttt
     5641 taggtggaag tgcagactta ggcccttcga ataaaacaga acttcacagt atgggagact
     5701 ttgtagaagg taaaaatatc cattttggta tcagagaaca cgctatggca gcgattaaca
     5761 atgcttttgc aagatatgga attttcttac cattttcggc aacttttttc atctttagcg
     5821 agtacttaaa acctgccgca agaatagcag ctctaatgaa aatcaaacat tttttcattt
     5881 tcacacacga tagcataggc gtgggcgaag atggaccaac acaccaacct atagaacaac
     5941 ttagcacttt tagagctatg ccaaattttt taacctttag acctgctgat ggggtggaaa
     6001 atgtcaaagc ttggcaaata gccctaaatg ctgatattcc gagtgctttt gtgctttcac
     6061 gccaaaaact caaagctcta aatgaacctg tttttggaga tgtaaaaaac ggagcgtatt
     6121 tactcaaaga aagcaaagag gctaaattta cacttctagc aagtggaagt gaagtttggc
     6181 tttgtctaga aagtgcaaac gaacttgaaa aacaaggttt tgcttgtaat gttgtttcca
     6241 tgccttgttt tgaacttttt gaaaaacaag ataaagctta tcaagaaaga ttgttaaaag
     6301 gtgaagttat aggtgttgaa gcagcacatt ctaatgaact ttataaattt tgccataaag
     6361 tatatggcat agaaagtttt ggagaaagtg gtaaagacaa agatgtgttt gaacgctttg
     6421 gatttagcgt ttcaaagctt gtaaatttta tccttagcaa ataaaatgaa tacaaatttc
     6481 aaatttcaaa ataatactct ttttatcttt ggaatttggg ataaaacaag tatttataag
     6541 ttaaaaataa aagatttttt agctttgatc caaagcaagg aagtgatttt tgattttaaa
     6601 gatctaaaag caatcgatac cgctggagtg agatttttcc ttgctttgga aaatgacctt
     6661 aaaaataaaa atattaaaat caccaaagaa ggcttaaatt cacgctttca aacccttttt
     6721 gaactttgtg aaaaaaacta ccaaagacta ggcaaaacaa aaaaatcaca tcaaaatttc
     6781 agtgaatact ttatcgatct tggaaaatta agtttagaac ttttaaaaat tttaagaaaa
     6841 ttcatcaatt tcacaggagc ttttttcaca agtctttttt tatgcctcaa aaatcctaaa
     6901 aattttcgct ttattgcttt tttatatcat atagaaaatt ctgcttttaa agccttacct
     6961 atagttattt taaccgctct tttagtagga gtggttttag cctatcaggc tgcttaccaa
     7021 ctcgcacaat ttggagccaa tattttcata gtggatttga tgggaatttc agccactaga
     7081 gaacttgcac ctttaatcgc tgccatagtg atcgcaggaa gaagtgcaag ctcttatacc
     7141 gcacaaattg gggtgatgaa aattactgat gaaattgcag ctatgaatac tatgggtttt
     7201 cgttcttttg aatttattgt tattccacgt gtcatggctt tggtagtagc tatgccttta
     7261 atcgttgcca ttagcgatgc aatcagtatt ataggtggaa tgatggttgc aaaattaaat
     7321 cttgatattt cttttgccga atttttaaga cgctttagag aagctgtaga tataaaacat
     7381 atctttatag gacttgcaaa agcacctatt tttggatttt tgataggact tattgcttgt
     7441 tttcgtggtt ttgaggtaaa aaacactaca caaagtatag gaatttatac aacaaaaagc
     7501 gttgtaaatg ctattttttg ggtgatagct tttgatgctt tattctctgt tattttaact
     7561 tctacaggaa tttaaatggt tattaaagca caaaatatca ttacaaaatt tggagaaaaa
     7621 attgtccatg atggcgtaag ttttgaaatc aaaaaaaacg aaatttttgg tattttagga
     7681 ggtagtggaa gtggaaaatc cgtcctttta aaacaaatgc ttatgcttga acattttgat
     7741 gatggagaat atgaaatttt aggctataaa cttaaaaata tcaacgaaga agatgcactt
     7801 gctttgcgta aaaaatgggg tgtggttttt cagtttgctg cactttttag cttttttaat
     7861 gtttatgaaa atatcgctat tcctttaaaa gaatacactc atttagatga aaatagcata
     7921 caagaactgg ttttaatgaa gctaaaaatg gtaggcttaa acgaaagtgt tttaaaacaa
     7981 tttccaagcg aacttagtgg cggtatgcaa aaaagagtgg caattgctag agctttagca
     8041 cttgatagta aattgctttt tttagatgaa cctacttcag gacttgaccc tcatagtagt
     8101 cgtgaatttg acgatttggt tttagagtta aaaaaaagtt ttgatctaaa tatcattttg
     8161 gttacacatg ataaagaaag tatgaaaaat ttactcgatc gttttatcat tttagaaaat
     8221 aaaaaagttg gattttgcgg cacttatgaa gaattacgct tgcaaaatga acgacttttt
     8281 aaaagattta tggagtaaaa gtggaaaata gagcaaatta tttttttgta ggactttttg
     8341 tttttggagt attttttgca agccttggtt tcatactttg gcttggtgga tactctaaag
     8401 aagaaagttt taagtattat gaaattcaca cacaagaatc cgttgcagga cttggcataa
     8461 aagcacccgt aaggcttttg ggcgtggaag taggtagcgt agaagaaatc agcatttaca
     8521 atcaagatga actcggcgtt aacatacgca tcaaggtcaa aaacaatacc cctataaaag
     8581 aagatacttt tgctactttg caacttcaag gtatcacagg acttaaattt atccaacttc
     8641 aaggcggaag taaaaatagt aaagatctag tatctatgca gggaaaactt ccagtcattc
     8701 cttttaaaga aagtttttta gcgaccatag acagacaaag tgaacatatt ttttctttgg
     8761 ttaaaacggc cgatgataaa tcaaaagaac ttttaagcga aaaaaatctt aaaaatctag
     8821 aaatcctttt gcaaaatcta gcagaattaa gtgcaaattt aaacgctaat tctaaaaatt
     8881 taagtcttaa tctttcaaac gcaagtttaa aaataggaaa aatggctgat aatataagcc
     8941 ttagtgcgca aaatttcaac tccagtctta aaaacataaa agaaagcaca atgattttaa
     9001 aaaatttcat aaaaaaagct gatgaaaaat taaacactta tgatgatatt aaagcatctt
     9061 tgatgcaaaa tttagaactt tttaaacggg ttttaattga aagcaatatt ctaatagaaa
     9121 atttacaaaa cagccctgct gatttgattt ttaaagaaac taaacctaaa cttggaccag
     9181 gagaaaaata atgctaaagc aattattctg tattttgact tttattttta tgttatgcgg
     9241 atgctcttta agacacgaaa ccatcaataa aaatgaaaat atcatattaa aagacgaagg
     9301 aatagactca aatatttttt ttaaaaaaac tggtaaaatt cttaaaattc gcaatgcaaa
     9361 tgcacctttg tatttaaact caagagctat tgtttatata gataatggtt ttagcaacaa
     9421 atacgcacat tatttctggg gagatttacc aagcaatctt tattcttttt taattttatc
     9481 aaaatttgaa caaagcaata tttttacaac cttactttct tcaacaagct ctttaagtgc
     9541 ggattattct cttgaaagca ggattaactc ttttgagcaa attcttaata acaatgaaaa
     9601 ctacgctcaa atttctataa gcgtaaattt cataaatctt gaaaacaatc aaataatagc
     9661 tcataaaatt ttcaatacca aagaaaaaat agaaaaaaaa gatatccgct ctacctataa
     9721 tgcttttcaa aaagccttga ataaaattgg caatgagatt gttttttggg taaattctaa
     9781 cttatcctaa tttaggaaca ctttttgctt tttaaatatt tagcaatatt tttgaaaggt
     9841 aaacaatgaa aagtgattta gatatattta aaaaacactt aggtgaaatt cagggcgtga
     9901 atgaatttaa agcaaatcaa atttgctctc aaatcaatga tgcaaatgat tttataggag
     9961 cacttcaagt gcttgatatg tctttaaaaa aaatagaaaa aagcattcta gaaagaatag
    10021 atgaaaattc agatgatatg caaaaaagaa ctcttgatgc cacagcgtca caacttatac
    10081 aaaactgctc tttcatggga acagctcttt ttggaaatat tttcaatgtt tatgttggta
    10141 aaaaactttt tgaatttgaa attgctaatc cacttttaat tcttcaaaca agtaattacg
    10201 aaggtgtatt ggcctatata caagataaaa gagatgaaat aaaaatcatt ctatcagaat
    10261 tatcaaccgc aattaccatg ggcgaaacta tggataatgc tggaatttat aactctacaa
    10321 tggattttaa aaatttattt aaataagaat agtaatcgtt tgttctcttt aagcaaatat
    10381 aatatatttt agcttaaaga gattttccaa actctaaaag agagttaggc tacgaataaa
    10441 aagggggagg gaaatagcct aacccaaacg agatcttaa
//
LOCUS       DAPIVO010000058        10476 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.058, whole genome shotgun sequence.
ACCESSION   DAPIVO010000058 DAPIVO010000000
VERSION     DAPIVO010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10476)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10476)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10476
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.058"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            52..660
                     /gene="plsY"
                     /locus_tag="RJ239_001441"
     CDS             52..660
                     /gene="plsY"
                     /locus_tag="RJ239_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HDV7331549.1"
                     /translation="MENLIIYAFIYLLGSIPFGLILAKFFAKTDIKKEGSKSIGATNV
                     LRVVKEKNPKLAKKLAIATIILDFAKAAIPLLTLKFLHYDQALLWSVAVLAILGHCFS
                     IYLLFEGGKGIATGAGAMIVLLPLEVLTAFIVWVVIGKIFKISSLASLAALLAFVVSS
                     FIFNYDLEIHTHAPVFIIAFIIVYKHLPNIKRLIFKEECKVI"
     gene            645..962
                     /locus_tag="RJ239_001442"
     CDS             645..962
                     /locus_tag="RJ239_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HDV7331550.1"
                     /translation="MQSHIKIKFHFKCIIGILDFERRKKQKIIIKLKAKANEFLNYAE
                     VITKIKTWYKKEEFYTLEESLDFVSLNLKKDFPNLTNLNIKIFKPHIIKNATVGVKLK
                     KKY"
     gene            1041..1712
                     /gene="hsrA"
                     /locus_tag="RJ239_001443"
     CDS             1041..1712
                     /gene="hsrA"
                     /locus_tag="RJ239_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homeostatic response regulator transcription
                     factor HsrA"
                     /protein_id="HDV7331551.1"
                     /translation="MRILVIEDEISLNKTIIDNLNEFGYQTDSSENFKDGEYFIGIRH
                     YDLVLANWTLPDGDGAELVNTIKHKSPRTSVMIMSSKTDKETEIKALKAGADDFVTKP
                     LDFDILLARIEARLRLGGTNVIKIEDLVIDPDEEKITYKDQDIELKGKPFEVLTHLAR
                     HSDQIVSKEQLLDAIWEEPELVTPNVIEVAINQIRQKMDKPLNISTIETVRRRGYRFC
                     FPKKS"
     gene            1825..2070
                     /locus_tag="RJ239_001444"
     CDS             1825..2070
                     /locus_tag="RJ239_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HDV7331552.1"
                     /translation="MSLLITKDCVCCDACREECPDEAIYENSPIYVIDPDLCSECVND
                     FSEPACIVACPYECIIPDPDNVETIEELKLKHRDREF"
     gene            2070..3530
                     /locus_tag="RJ239_001445"
     CDS             2070..3530
                     /locus_tag="RJ239_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HDV7331553.1"
                     /translation="MAKKTAVVDLGSNSIRMVIFEKTSRYGFYTTCEYKRKVRLGENA
                     YNNGKILQEEAMQRAEDALAFFKQCALKHKCKKIFIVGTSALRDAPNSKNFIKRIKDN
                     LSLNIRCIDGKSESYLGGLAALNLLSPFKDGTTLDIGGGSSELCLIKNNRIISCISLD
                     IGTVRLKELFYDTGKMDSLEEFIKPILEQIPKEFYNQNLIAIGGSLRAISNSIMQKNS
                     YPLKNLHDFRYMLDEEKGHILKIFNSNLDSLINFGIKKDRFDTIKEGIFIFLKIAEKI
                     KAKQVITSGVGIREGVYLQDLLRPKITFPPNFNPSLKCLQDKFLQSKQKNKTPHFALQ
                     IFTTLKNLHKLNDNYKHTLLNAAKLCHIGEYLNFYFANEHSAHFVLGGLNYGFSHKEK
                     ALIASIIKLNGKKVNPYNLEPYKQLLPNIHTISWLNFILCLAKTLSTNEDKIDFAFAN
                     NTLYIYQENKILNLPKDELKKIAKPATIALAINQKI"
     gene            complement(3527..4324)
                     /locus_tag="RJ239_001446"
     CDS             complement(3527..4324)
                     /locus_tag="RJ239_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331554.1"
                     /translation="MRLLVLFFLILPLYSVELISFNIYDRNDRVDLMLSFDNAYNGKI
                     SQKKEKNLTLLTFSDLTYSKDELKELNSQLVDKISISSKNNNTYIMLQNKQNINLELS
                     SINDKFGVRIRAIEQGKANIESVPTTTVNNSQELMPKPKSTSLEGYDYTNYILVMLIL
                     VILLIVLWWFKKTMVYKNNNVSRDFTMIFQRFLDKNNQLVIFDHANKRYTMIIGNSNV
                     LLESVEIPEEQTIKHTEKTEKNFDSFFEENKKRIQNLIEQRQKGKKS"
     gene            complement(4325..4633)
                     /gene="fliN"
                     /locus_tag="RJ239_001447"
     CDS             complement(4325..4633)
                     /gene="fliN"
                     /locus_tag="RJ239_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HDV7331555.1"
                     /translation="MSDDIEFNIHHGLLQSYEDILDITVDFVSELGTTNMSVAELLKL
                     EVGSVIDLEKPAGESVELYINKRIFGKGEVMVYEKNLAIRINEILDSKTVLQYFKKEI
                     "
     gene            complement(4633..5055)
                     /locus_tag="RJ239_001448"
     CDS             complement(4633..5055)
                     /locus_tag="RJ239_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheX"
                     /protein_id="HDV7331556.1"
                     /translation="MLKILEYSITHFCEHILRLRIEAAQDISGELYGASIPIMGKSEG
                     ECNFYLFFPKEFLKKIAEILINDEKFKEDDWCDLTKECANQIIGYAKNLLNDAKGDDE
                     YKLGIPEYLGKVDFSEIVLDEALTYKFENCYFRIGYCK"
     gene            complement(5126..5875)
                     /locus_tag="RJ239_001449"
     CDS             complement(5126..5875)
                     /locus_tag="RJ239_001449"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HDV7331557.1"
                     /translation="MVDFRKFYKENANVAYTVLGYPNLQTSEAFLQRLDQSPIDILEL
                     GVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYYNLIFSYGL
                     EKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKH
                     AKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRKVA
                     DGVIVGTSIVKCFKQGNLDIIMKDIEEIFKK"
     gene            complement(5868..7046)
                     /gene="trpB"
                     /locus_tag="RJ239_001450"
     CDS             complement(5868..7046)
                     /gene="trpB"
                     /locus_tag="RJ239_001450"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HDV7331558.1"
                     /translation="MKKAYYGDFGGQFLPESAMFALNELEGAFLKFSKDKLFKKELNE
                     LLKTYVGRPTPLYFARNLSKKYQHEIYLKREDLNHTGAHKINNAIAQALLAKKMGKKK
                     IIAETGAGQHGLATATAAALLGLECEIYMGATDVQRQALNVYKMELLGAKIHAVQSGL
                     KTLKEATTAAIQAWVGDIKNIFYVVGSAVGPYPYPKMVMHFQSIIGKECKMQLQKLNK
                     KVDYIIAAVGGGSNAAGIFYDFIKDENVKLIGIEAGGLGIDTPYHAATLNKGKTGIIH
                     GMKTKVLQDDLGNILPVHSVSAGLDYPGIGPLHAFLFESKRAQYHAISDEECMQALKL
                     LCKEEGIIAAIESSHALAFLEKLCPTLKKKSVIVVNLSGRGDKDMQMIRDYKKGVIYG
                     "
     gene            complement(7043..7642)
                     /locus_tag="RJ239_001451"
     CDS             complement(7043..7642)
                     /locus_tag="RJ239_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HDV7331559.1"
                     /translation="MLKLKICGIKDEKNAKDLAFLNIDFFGLIFAKSPRRVSLEQARN
                     LSAIFHEKDKKVVGVFVDENLEQILRCIKEAKLDGIQIYRTITKEEFEILKVQNVFVW
                     QVISVENSLDLKSEIFANLVLFDAKGILKGGNGISFDWTLLGSYTKDFILAGGIGLDN
                     VHKAVKTGAKILDLNSKLEDEKGLKDINKIKQILKELKK"
     gene            complement(7629..9230)
                     /gene="trpD"
                     /locus_tag="RJ239_001452"
     CDS             complement(7629..9230)
                     /gene="trpD"
                     /locus_tag="RJ239_001452"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HDV7331560.1"
                     /translation="MILLIDNYDSFVFNVKSMLEQLSNDEILVRRNDAISLSEIKNLN
                     PTHIILSPGPKHPSQSGICLEIFKARLNIPVLGICLGHQALALAFDSLVVKMQEPMHA
                     KNSLIKQCRENELFSNLPSNFSVMRYHSLEVKQLSDELEILALDEKGVIMALGHKNLP
                     YYGVQFHPESYFSEYGLQLFSNFLKQDIKKPQKQENPLSFYLQKMSENHFLQSDDFEQ
                     ICKIIMSKDYEILQVVALLILITEKSLNEKSLSAFVRQILRYSQTFSDESEMIDICGT
                     GGDGFKSINVSTTSAFILAALGVKVAKHGNRAISSSSGSTDVLEALNITTPNTLESVL
                     KQLNNQGLSFLHAPFFHPLVGELKEIRSRLGVRTVFNVLGPLLHPNLKLKYQLMGNYH
                     APVHRLLIEVLKNLGRKKALVVRGNDGMDELSICDESKIYELCEGEILEYSICPEQFG
                     FKRAFHSEIIGSSAYDNAKDLKDILSGRMQGAKFDLVVLNAMFALYTANKASSPLVAK
                     DMILEAIYSGKVIEYFKEYQAYAKA"
     gene            complement(9227..>10476)
                     /locus_tag="RJ239_001453"
     CDS             complement(9227..>10476)
                     /locus_tag="RJ239_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HDV7331561.1"
                     /translation="FVKNVNFYYRQILEKFENSYFAEDLTKVIIGIDCDYLDANELSF
                     SEFKAKYYEALSKNKICDFAGFFGVFSANFVSLFEKIPLSSKKNYDFPLFLFANAKAY
                     LIYEKNSKMFFKFGASKYFEYLKDDIEPMKKKQKNDFEILNSLEDEKNDFLKMCEKAK
                     EYLLSGDIFQVVLSKQLCIKHQVNAFDYYESLSALNPSAYMFYFPSKYGVVLGSSPEF
                     LLKIKKREIYLAPIAGTRNLENNCDLLALEKDLLSDEKELSEHKMLVDLARNDASKFG
                     TQTRVENLFSIIKNKFVMHIVSEVYANMKEDASIFDVIEAVFPAGTLSGAPKIRALEI
                     TSELEDCDRGIYGGAVGFLNFNEDITLAILIRCAFFTQDKAYLASGAGIVLQSESQKE
                     YAEICAKRKALLVAFENLKKENQ"
BASE COUNT         3701 a         1802 c         1285 g         3688 t
ORIGIN      
        1 taatttttag ttataaatct taaaatttta agatgatttg aaaaggatat tatggaaaat
       61 ttaataattt acgcttttat atatctttta ggttcaatcc cttttgggct aatcctagct
      121 aaattttttg ctaaaactga tatcaaaaaa gaaggttcaa aaagtatagg agcaaccaat
      181 gttttaagag tagtaaaaga aaaaaatccc aaactagcaa aaaaacttgc cattgctaca
      241 ataattttag attttgcaaa agcagctatt cctttattaa ccttgaaatt tcttcattat
      301 gatcaagctt tgctttggag cgtggcagtt ttggctattt tgggacactg tttttcaatt
      361 tacttgttat ttgaaggagg gaaaggcata gcaacaggag caggtgctat gatagttttg
      421 cttccattgg aagtgcttac agcatttatt gtatgggtag ttataggaaa aatttttaaa
      481 atatcttcgt tagcttcttt agcagcgtta cttgcttttg ttgtaagttc ttttatattt
      541 aattatgact tagaaattca tacacatgca cccgttttca ttatcgcttt tattatagta
      601 tataaacatc tacctaatat taaaagattg atttttaaag aagaatgcaa agtcatataa
      661 aaataaaatt tcactttaag tgtatcattg gtatattaga tttcgaaaga aggaaaaaac
      721 aaaaaattat tatcaagctt aaagctaaag caaatgaatt tttaaattat gcagaagtaa
      781 ttaccaaaat taaaacatgg tataaaaaag aagaatttta cacccttgaa gagtctttag
      841 actttgtaag cttaaattta aaaaaagatt ttcctaattt aaccaatctt aacataaaaa
      901 ttttcaaacc ccatataata aaaaatgcta cagttggggt taaattgaaa aaaaaatatt
      961 aatttttttt taaagatatc taaacattta cttaagctat gatataattc tttaaatttt
     1021 tcttaataag gatagaacaa atgagaattt tagttataga agatgagatt agcctaaata
     1081 aaacaattat agacaatctt aatgaatttg gttatcaaac tgattcttct gaaaatttta
     1141 aagatggaga atactttatc ggcattagac attatgattt agttttagca aactggactt
     1201 tacctgatgg agatggagcg gaacttgtta acactattaa gcataaatct ccaagaactt
     1261 cagttatgat tatgtcttca aaaacagaca aagaaacaga aatcaaagct ttgaaagctg
     1321 gagctgatga ttttgttaca aaacctttag attttgatat tctactcgca agaattgaag
     1381 caagactaag acttggcgga accaatgtta ttaaaattga agacttagtt attgatccag
     1441 atgaggaaaa aattacttat aaagatcaag atatagaact taaaggaaaa ccttttgaag
     1501 ttttaacgca cttagcaaga cattcggatc aaattgtatc caaagaacaa cttttagatg
     1561 ccatctggga agaacctgag ctagtaactc caaatgttat cgaagtagct atcaatcaaa
     1621 ttcgtcaaaa aatggataaa ccattaaata tatctaccat agaaacagtt cgtcgtagag
     1681 gataccgttt ctgcttccct aaaaaatctt aacaattttg caccttcggt gcaaaaaatt
     1741 tatctttatt tctattttta tattttattt aagtttggtt attgtataaa ctaaaattat
     1801 tttttaaatt tttgaaaggt tatgatgtct cttttaatta caaaagactg cgtatgttgt
     1861 gatgcttgca gagaagaatg tcctgatgaa gctatttatg aaaatagtcc aatttatgta
     1921 atagaccctg atctttgttc agagtgcgtt aatgattttt cagagcctgc ctgtattgtt
     1981 gcttgcccat atgaatgtat cattcctgat cctgataatg tagaaactat agaagaatta
     2041 aaactcaaac atagagatag agaattttaa tggcaaaaaa aacagccgtt gttgatcttg
     2101 gctcaaactc cattagaatg gtgatttttg aaaaaacttc tagatatggt ttttatacaa
     2161 cttgcgaata caaacgcaaa gtaagacttg gagaaaatgc ttataataat ggcaaaattc
     2221 tccaagaaga agccatgcaa agagccgaag atgccttagc ttttttcaaa caatgcgctt
     2281 taaagcataa gtgcaaaaaa atatttatag taggcacatc agccttaaga gatgccccaa
     2341 attcaaaaaa tttcattaaa agaatcaaag ataatctgtc tttaaatata cgctgtatag
     2401 atggaaaaag cgaaagttac ttaggtggtc ttgcggctct aaatttatta agtcctttta
     2461 aggatggaac cactttagac ataggtggtg gttctagtga attgtgttta ataaaaaata
     2521 atagaattat ttcttgcata tctcttgata ttggcactgt taggctaaaa gaattgttct
     2581 atgatactgg aaaaatggat tctttagaag aatttataaa accaatttta gaacaaattc
     2641 ctaaagaatt ttacaatcaa aaccttattg caataggtgg aagcttaaga gcaatatcta
     2701 attccatcat gcaaaaaaat tcctatccac tgaaaaattt acatgatttt cgctatatgc
     2761 tagatgaaga aaaaggacat attttaaaaa tttttaattc aaacttagac tctttaatca
     2821 attttggcat aaaaaaggat cgttttgata ccattaaaga gggtatattt atttttttaa
     2881 agattgcgga aaaaataaaa gccaaacaag ttatcacgag tggggttgga atcagagaag
     2941 gagtttattt gcaagattta cttcgtccta aaatcacatt tccaccaaat ttcaatccca
     3001 gtttaaaatg tttgcaagat aaatttttac aatcaaaaca aaaaaataaa actccacatt
     3061 ttgctctgca aatttttaca acccttaaaa atcttcataa acttaacgat aactataagc
     3121 atactttact aaatgctgcc aaattatgcc atattggaga atatttaaat ttctattttg
     3181 ctaatgaaca ctctgctcat tttgtactag gtggattaaa ttatggattt tcgcataaag
     3241 aaaaagcttt aattgctagt attattaagc ttaatggaaa aaaagttaat ccttataatc
     3301 ttgaacccta taaacaactt ttacccaata ttcataccat ttcatggctt aattttattt
     3361 tgtgcttagc taaaacttta agcacaaatg aagataagat tgattttgct tttgcaaaca
     3421 atactcttta tatatatcaa gaaaacaaaa ttcttaattt acccaaagat gagctcaaaa
     3481 aaattgcaaa accagctacc atagcattag caatcaatca aaaaatttaa gattttttac
     3541 ctttttgacg ctgctctata agattttgaa ttcttttttt attctcttca aaaaaagaat
     3601 caaaattttt ctctgttttt tctgtatgtt ttattgtttg ttcctctgga atttcaacac
     3661 tttctaaaag tacattggaa ttacctatta tcattgtata acgtttatta gcgtgatcaa
     3721 aaataacaag ttgattattt ttatctaaaa atctttggaa aatcatagta aaatctctag
     3781 aaacattgtt atttttataa accatagtct ttttaaacca ccaaagcact attaacaaaa
     3841 taactaaaat tagcattact aagatataat ttgtataatc atacccttct aaacttgtac
     3901 tttttggttt aggcattaat tcttgagaat tattcacagt agttgtaggt acagattcga
     3961 tatttgcttt tccttgctct atagctcgta tccttactcc aaatttatca ttgatagagc
     4021 taagttctaa attaatattt tgtttgtttt gtagcataat ataggtatta ttatttttag
     4081 aactaatact aattttatct acaagttgag agttaagttc ttttaattca tctttagaat
     4141 acgttaaatc actaaaagtt aaaagagtta aatttttttc ttttttttga gaaatcttgc
     4201 cattataggc attatcaaaa gaaagcatta aatctactcg atcatttcta tcgtagatat
     4261 taaaactaat cagctcaaca ctatataaag gtaaaattaa aaaaaataat actagcaatc
     4321 tcatttaaat ttctttttta aagtattgaa gcacagtctt agaatccaaa atttcattaa
     4381 ttcttatagc gagatttttt tcataaacca taacctcgcc tttgccaaaa attcttttat
     4441 tgatataaag ctcaacgctt tctccagcag gcttttcaag atcaataacc gaacctactt
     4501 caagttttaa aagctccgct acactcatat ttgtagttcc aagctcgctt acaaaatcta
     4561 ctgtaatatc taagatatct tcataagatt gtaaaagccc atgatgaatg ttaaactcta
     4621 tatcatcgct cattatttgc aatatcctat tctaaaataa caattttcaa atttataagt
     4681 taaagcttca tctagaacta tttcagaaaa atcaactttt cctaaatatt ccggaattcc
     4741 gagtttatac tcgtcatcac ccttggcatc atttaacaaa tttttagcat aacctataat
     4801 ctgattggca cattctttag ttaaatcgca ccagtcatct tctttaaatt tttcatcatt
     4861 aattaaaatt tctgcaattt tttttaaaaa ttcttttgga aaaaataaat aaaaattaca
     4921 ttctccttcg cttttgccca tgataggaat actcgctcca taaagttcac cgcttatatc
     4981 ttgagctgct tcaatgcgaa gtcttaagat atgctcgcaa aaatgagtga tggaatactc
     5041 aagaatcttt aacataacta ccgcctttat aaaaaactta atttaaaatt atagtaaata
     5101 taaaataaaa atatgtttta aaattttatt ttttgaaaat ttcttcaata tctttcatta
     5161 ttatatccaa atttccttgt ttaaaacact ttactatgct agttcccaca atcactccgt
     5221 cagcaacttt tctcattctt tttacatctt gattattttg aatgccaaag cctacaaaaa
     5281 taggcaaatt tgtaaaagat ctgatttctt ttactttatc ttgtaagatt gcttcttcga
     5341 cacttttcgt acctgtaata cctatgcttg ctaataaata aataaaacct ttagcatgtt
     5401 ttactaactt tttaaccctt tctttagggg ttgtaacact tacaagtgta attaaagcta
     5461 tattatatct ttcacactct ttaatcaaat catcactttc ttcaaaactc aattcaggca
     5521 caatcaaagc acaaatccct aaagattttg cttttttcac aaatttttcc aagccataag
     5581 aaaaaattaa attataataa accataaaaa ccaaagcttt tttagttttt atcctagcta
     5641 aaagctcaaa aacactatga atatccacgc cttgatcaag agctattttt gccgcatctg
     5701 caataatctc accatcggca ataggatcac tataagcaac accaagttct aaaatatcaa
     5761 taggactttg atccaatctt tgcaaaaaag cttcacttgt ttgaagattt ggataaccta
     5821 aaaccgtata agccacattt gcattttctt tataaaattt tctaaaatca accataaatc
     5881 accccttttt tataatctct aatcatttgc atatctttat ctcccctgcc tgaaagattt
     5941 actactatca cgcttttctt ttttaaagtt ggacaaagtt tttctaaaaa tgccaaagca
     6001 tgcgaacttt caatcgctgc aataatacct tcttctttac aaagtaattt taaagcctgc
     6061 atacattctt catcacttat agcatgatat tgcgctcttt tgctttcaaa taaaaaagca
     6121 tgcaaaggac caattcctgg ataatcaagc cctgcagaaa cactatgtac aggcaagata
     6181 ttgcctaaat catcttgtaa aaccttggtt ttcataccgt gaataatgcc tgtttttccc
     6241 ttatttaaag tcgctgcatg ataaggcgta tcaataccaa gcccccctgc ttcaatacct
     6301 ataagtttaa cattttcatc tttgataaaa tcataaaaaa tcccagctgc attgcttcca
     6361 cccccaacag ctgcgataat ataatctact tttttattga gtttttgaag ttgcattttg
     6421 cattcttttc ctataatact ttgaaaatgc attaccattt taggataagg ataaggacct
     6481 accgcacttc caaccacata aaaaatattt ttaatatctc caacccaagc ttgaatagcc
     6541 gcagtagtag cttcttttag agttttaagc ccactttgta ctgcatgaat tttagcaccc
     6601 aaaagctcca ttttataaac atttaaagcc tgtctttgca catcggttgc ccccatataa
     6661 atttcacatt caagtcctaa aagtgctgct gcagtggctg ttgcaagccc gtgttgacct
     6721 gctcctgttt ctgctatgat ttttttcttt cccatttttt ttgctaaaag ggcttgagcg
     6781 atggcattat tgattttatg tgctccggta tgatttaaat cctcgcgttt taaataaatt
     6841 tcatgctgat attttttgct taaatttcta gcaaaataaa gtggagtagg acgccctaca
     6901 taagttttta aaagctcgtt taattctttt ttaaagagtt tatctttaga aaatttcaaa
     6961 aaagcacctt ctagctcatt taaagcaaac attgcacttt caggcaaaaa ctgcccacca
     7021 aaatccccat aatacgcttt tttcattttt tcaactcctt taaaatttgt tttattttgt
     7081 tgatatcttt taagcctttt tcatcttcaa gttttgaatt aagatctaaa attttagctc
     7141 ccgtttttac agccttatga acattatcca aacctatgcc tccggctaat ataaaatctt
     7201 tagtataaga acctaataaa gtccaatcaa aacttattcc attaccgccc tttaaaattc
     7261 ccttagcatc aaaaagtact aaattagcaa aaatttcact ttttaaatct aaactatttt
     7321 ccacactaat cacctgccaa acaaaaacat tttgcacctt taaaatttca aattcttctt
     7381 tggtaatagt gcgataaatt tgtatcccat caagcttagc ttctttaata catcttaaaa
     7441 tttgttccaa attttcatct acaaaaacac cgacaacttt tttatctttt tcatgaaaaa
     7501 ttgcacttaa atttcttgct tgttctaaac tcactcttct tggactttta gcaaaaataa
     7561 gtccaaaaaa atcaatattt aaaaaagcta aatctttggc atttttttca tctttaatac
     7621 cacaaatttt aagctttagc ataagcttga tactccttaa aatattctat aaccttacct
     7681 gaataaatgg cttctaaaat catatcttta gccactaaag gcgaacttgc tttattggct
     7741 gtataaagtg caaacatagc atttaaaact accaaatcaa attttgcccc ttgcattcta
     7801 ccgcttaaaa tatcttttaa atctttagcg ttgtcatatg cactagatcc tatgatttca
     7861 ctatgaaaag ctcttttaaa accaaattgt tcaggacaga tagaatactc taaaatttct
     7921 ccttcacaaa gctcataaat tttactttca tcgcaaatac taagctcatc cataccatca
     7981 tttcctctta ccactaaagc ttttttgcgt cctaaatttt ttaaaacctc tatcaaaagc
     8041 ctatgcacag gtgcgtgata atttcccata agttgatatt ttaactttaa attagggtgc
     8101 aataaaggac ctaaaacatt aaaaaccgtt cttactccaa gtcttgatct gatctcttta
     8161 agttctccta ctaaaggatg aaaaaatgga gcatgtaaaa aactaagccc ttgattattt
     8221 agttgtttta aaactgattc taaagtgttt ggagtagtta tatttaaagc ttctaacaca
     8281 tctgtacttc cgctagaact tgaaatggca cgatttccgt gtttggctac ttttactcct
     8341 aaagctgcta aaataaaagc actagtcgta gaaacattga tacttttaaa accatctcca
     8401 cctgttccac aaatatcaat catctcactc tcatcactaa aagtttgaga atatcttaaa
     8461 atttgtctta caaaagcact taaagatttt tcatttaagg acttttcagt gattaaaatc
     8521 aacaaagcca ctacttgtaa aatttcataa tctttagaca taataatctt acaaatttgc
     8581 tcaaaatcat cgctttgtaa aaaatgattt tcactcattt tttgcaaata aaaacttaaa
     8641 ggattttctt gtttttgtgg tttttttata tcttgtttta aaaaattaga aaaaagttgc
     8701 aagccatatt cactaaaata gctttcagga tgaaattgca caccataata aggtaaattt
     8761 ttatgtccca aagccataat cacacccttt tcatcaaggg ctaaaatttc aagctcatca
     8821 ctaagctgtt taacctctaa agaatgataa cgcattacac taaaatttga aggcaaatta
     8881 gaaaataatt cattttccct gcactgtttt atcaaagaat tttttgcatg cataggctct
     8941 tgcatcttaa ccactaaaga atcaaaagct aaagctaaag cttgatgtcc taagcaaatg
     9001 cccaaaacag ggatattaag ccttgcttta aaaatttcaa gacaaatccc actttgactt
     9061 ggatgctttg gaccaggact taaaataata tgagtaggat ttaaattttt aatttcactc
     9121 agagaaattg catcatttct tcttactaaa atttcatcat tgctgagttg ctctaacatg
     9181 cttttaacat taaaaacaaa agaatcataa ttatcaatta aaagtatcat tgattttcct
     9241 tttttaaatt ttcaaaagct accaaaagcg ccttgcgttt agcacaaatt tctgcatatt
     9301 ctttttgact ctcactttgc aaaacaatac ccgccccact tgccaaataa gccttatctt
     9361 gagtaaaaaa agcgcaacgg attaaaatcg ctaaagttat gtcttcgtta aaatttaaaa
     9421 atcctaccgc accaccataa attccacgat cgcaatcttc aagctcgcta gtgatctcta
     9481 aagctcttat tttaggagct ccgcttaaag ttcccgctgg aaaaactgct tcaatcacat
     9541 caaaaatact cgcatcttct ttcatattgg catacacttc actcactatg tgcattacaa
     9601 atttattttt aataatagaa aaaagatttt ccactcttgt ttgagtgcca aatttagaag
     9661 catcatttct tgctaaatct acaagcatct tatgttcact aagttctttt tcatcgctta
     9721 aaagatcttt ttctaaagct aaaagatcac agttattttc caaatttcta gttccagcaa
     9781 taggggctaa ataaatctct ctttttttaa ttttcaataa aaactctgga gaagaaccca
     9841 aaacaacacc atatttactt ggaaaataaa acatataagc gcttggattt aaagcactta
     9901 aactctcata ataatcaaaa gcatttactt gatgtttgat acaaagttgc ttacttaaga
     9961 ccacttgaaa aatatctcca cttaaaagat attctttggc tttttcgcac atttttaaaa
    10021 aatcattttt ttcatcttct aaagaattta aaatttcaaa atcatttttt tgtttctttt
    10081 tcattggttc aatatcatct tttaaatatt caaaatattt tgaagcacca aatttaaaaa
    10141 acatcttgct atttttctca taaatcaaat aagccttagc attggcaaat aaaaataaag
    10201 gaaaatcata atttttctta gaagaaagtg gaattttttc aaacaaagat acaaaatttg
    10261 cactaaaaac tccaaaaaat ccagcaaagt cgcaaatttt attcttgctt aaagcttcat
    10321 aatattttgc cttaaactcg ctaaaggata attcattagc atctaaataa tcacaatcaa
    10381 tccctataat taccttagtc aaatcctctg caaaataaga attttcaaat ttttcaagga
    10441 tttgtctgta ataaaaattt acatttttaa caaaca
//
LOCUS       DAPIVO010000059        10420 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.059, whole genome shotgun sequence.
ACCESSION   DAPIVO010000059 DAPIVO010000000
VERSION     DAPIVO010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10420)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10420)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10420
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.059"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            1..822
                     /locus_tag="RJ239_001454"
                     /pseudo
     CDS             1..822
                     /locus_tag="RJ239_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004305525.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
     gene            832..2877
                     /gene="kdpB"
                     /locus_tag="RJ239_001455"
     CDS             832..2877
                     /gene="kdpB"
                     /locus_tag="RJ239_001455"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HDV7331562.1"
                     /translation="MSKKQNKLITKEILNNAIKGAFLKFDPRFMVKNPVMFMVEVGSI
                     LTLILSIFPTLFNGNSDERIYNILITFILFIILFFANFAESIAEGRGKAQAATLRQSK
                     KDSKARHIKSDGSEEMLNSSELKIGDIVLVKAGELIPNDGEIIEGTASVDESAITGES
                     APVMREAGGDFSSVTGGTTVLTDFLKIKILVGAGESFLDKMINLVEGAARQKTPNEIA
                     LNTLLIVLSLSFLMVVVSLYPFMQFLGVSLPISWLVALLVCLIPTTIGGLLSAIGIAG
                     MDRVTRFNVIALSGKAVESCGDVDTMILDKTGTITFGNRLANEFYEVQGISKEEMIKA
                     CVLSSLKDETPEGKSIVALAQKMGYELEGNDIKEFIEFSAQNRMSGVDLQDNTKIRKG
                     AFDAIRAYISEMNGKIPSDLETKVMEISNLGGTPLVVCKNEKILGVIYLKDTVKPGLK
                     ERFDELRKMGIKTLMCTGDNPLTAATITKEAGLDGFIAECKPEDKIKAIKKEQAQGKI
                     VAMTGDGTNDAPVLTQADVGIAMNSGTQAAKEAANMIDLDSNPTKILEVVEIGKGLLI
                     TRGSLTTFSMTNDIAKYFAILPAMFSVVLPQMQILNIMHLATPKSAILSALIFNAIII
                     PLLIPIAMRGVKFKPMKSEHLLLRNLSIYGLGGMIAPFIGIKIIDIPTAWILRILGV"
     gene            2913..3402
                     /locus_tag="RJ239_001456"
                     /pseudo
     CDS             2913..3402
                     /locus_tag="RJ239_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020246928.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit C"
     gene            3479..5299
                     /locus_tag="RJ239_001457"
     CDS             3479..5299
                     /locus_tag="RJ239_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase KdpD"
                     /protein_id="HDV7331563.1"
                     /translation="MQRQSPEQILKKLEVKAKEEEKNKLVKLKIFLGYAAGSGKTYAM
                     LSEARTLRDNGVDVVLGYIEPHDRPETMALAQGFESIANLEIPYKNIVLKEFDLDATL
                     KRKPALVLVDELAHTNAKGLRNEKRFQDIEELLKAGIDVYTTLNIQHLESLNDLVANI
                     SKIEVKERIPDRIFDEADQVELVDIEPNKLLKRMQDGKIYKEKQAKLALENFFRQERL
                     IALREIALRRLASRVNLRASEQRLINDDLAYHTGEHILVCINASNAKVIRAAARLALA
                     FHAKLSALYIKNPNIKEAKALEENIELAKSFDAKIISVYDDIARQIAEYSSLSNVSKI
                     VLGKNKDKKSLKKRFLKLSLKKHPILIYILSMKIKFLLLKYEVKKSFDFLGFLKITGV
                     LLLATFIAFVFHKFNTQPSNIVMIFILAVFASSFISDNKIFAFYSSLVSVLIYNFFFL
                     EPIFSLKVHDSGNIITFTTMFIVGFLTAVFTRRLKLQSKELTKRAYRTAILLENSENL
                     ARVKSKQELWEQLGNQALKLLNLPIIIYPINKNNILSKPLLFFNDDKQMLKNCFSADE
                     IAIAQWVATNKERAGVCTNTLPNANAMYLPIEDGKKLKGL"
     gene            complement(5401..7374)
                     /gene="uvrB"
                     /locus_tag="RJ239_001458"
     CDS             complement(5401..7374)
                     /gene="uvrB"
                     /locus_tag="RJ239_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HDV7331564.1"
                     /translation="MLELTSEFKPSPDQQEAIKGIVKSIKKGNKYQTLLGVTGSGKTF
                     TMANVIKELNIPTLIMSHNKSLCAQLYSEFKGFFSKNHVEYFISYYDYYQPEAYIPRT
                     DVFIEKDSSTNEDLERLRLSATASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFEL
                     GMQISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDEL
                     DAMYHYNVLENKKGKDLKRFILYPTSQFSVGEARLKQAIKDIKTELNERLAYFEHENK
                     LVEYQRLKQRVEFDLEMLTSTGMCKGVENYARHLTGLKEGDTPYTLFDYFAIKNRKFL
                     VIVDESHVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKDCQFLFV
                     SATPAPLELELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDEAKKIIQRNERVL
                     VTVLTKKLAEELTRYYLELGIKVKYMHSDIDAIERNEIIRGLRSGAFDMLIGINLLRE
                     GLDLPEVSLIAIMDADKEGFLRSTTSLIQTMGRAARNVNGKVLLFCKKITKSMQEAMD
                     TTNERRKLQEAYNQKHNITPTSVKRHIEESLKNEENLGEIYRKGKKFEKMPANERAKI
                     VKELRKQMLEAAKALEFEKAATLRDEINKLRDL"
     gene            7528..7758
                     /locus_tag="RJ239_001459"
     CDS             7528..7758
                     /locus_tag="RJ239_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331565.1"
                     /translation="MFDEKIINTMTDKVNELIEKYNEVCEANEALRNELVSVKAQNEA
                     KSNQIMRLEEELKSRNIESEDIYKKIEAVLGR"
     gene            7748..7990
                     /locus_tag="RJ239_001460"
     CDS             7748..7990
                     /locus_tag="RJ239_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331566.1"
                     /translation="MADNLKQVIVNVNAKDFIVKCSEEFANFLEDDIALISGGTKKIE
                     LKRFVDAFVKKSYENYILERELKKLIKAINEELPTK"
     gene            7987..8424
                     /locus_tag="RJ239_001461"
     CDS             7987..8424
                     /locus_tag="RJ239_001461"
                     /inference="COORDINATES: protein motif:HMM:NF019575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDV7331567.1"
                     /translation="MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDY
                     EMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEKLFYCLNDCDYSLLDTPIYSDFK
                     SWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI"
     gene            8406..10259
                     /locus_tag="RJ239_001462"
     CDS             8406..10259
                     /locus_tag="RJ239_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HDV7331568.1"
                     /translation="MQRSDIRYYELAICGLYLDNLTFHSFDEIKPLTQVLVDLKTKKN
                     LKAIVLKECQKPDFKTVEIKEITEYFLTPLQFELANFIVYYYASKLGFVLGFFETSPK
                     YECHKMFFKDTPKLSNQQQNALSFLQKENNSLLFADTGSGKTEIYISLIKECLEQGKQ
                     ALLLMPEIALTPQMQKRLEVYFKDNFFLWHSKISKKKKQEYLERFCKGEVLLVAGARS
                     ALFLPFRNLGLIVVDEEHDNSYKASNQPFINARDLALFLGQKNNIQVILGSATPSLTS
                     FYKQKSFRLKGTFFESKKHFLYDENELGVTPMLLGELQKSLENQKQAIIFLPTKANFR
                     QIVCKDCGQTIKCPFCSIAMSLHKKRNVLKCHYCNYTSLIEQNCPSCQGVMLEARKMG
                     TAELQELLQETLPLARIAKFDSDEITSIRKLNAILKDFNENKIDILIGTSMLAKGHDY
                     HSVDLSVILGLDEYLLRPSFRASEETLALAMQVAGRAGRKGEARVLLQTKNRAFFEKY
                     IEDYDAFLKDELENRKDLYPPFKRLLRILIEDKDQQSSQKLCEKLAYQFKNIKQVELV
                     GYGICGVEMLHGKYRFYLLLRSENHKALVAIENYILQFKNVSADIDPIDFV"
     gene            complement(10269..>10420)
                     /locus_tag="RJ239_001463"
     CDS             complement(10269..>10420)
                     /locus_tag="RJ239_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2972 domain-containing protein"
                     /protein_id="HDV7331569.1"
                     /translation="IDYFIKNKSLVYTFFNIFENDLNHLKQKFPNIINSWTYYKEFEK
                     IYKDK"
BASE COUNT         3552 a         1408 c         1840 g         3620 t
ORIGIN      
        1 tgcaatgggg attattttta tcatttcttt gcttttaatt tattttagcg aaaaaatgtc
       61 aaatccaaat ttggattctt tgggtttaaa tgcaaatttg ggaaatttgg aaggtaaaga
      121 aataagattt ggcacagatg gttcgagttt atttagtgct gtaactactg cttttactac
      181 aggaagcgtc aataatatgc acgatagttt aaatccttta agcatcagtg ctactttgct
      241 aaatatgatg ctaaatgtag ctttcggtgg cgaaggagta gggcttatga atatgattat
      301 ttatgtgctc ttaaccgtgt ttatttgtgc attaatgata ggtagaactc cagaattctt
      361 gggtaaaaaa atagaaagcg cacaaatgaa gcttatagct ttggtaattc ttatccatcc
      421 tttattaatc cttgttttaa gtgcattagc tgttgttttt gcaaaagata gtataagcaa
      481 tcctagcttt catggcttgg ctcaaatttt gtatgaattt agttcttcgg cagcaaataa
      541 tggttcagga cttgaaggtt taaaagatga taatttattt tggaatttaa gcacagcttt
      601 tgctatgttt tgtgggcgtt atttggtttt aatagctcag cttgctatag ctggatcgct
      661 tttggctaaa aatacacaag aaaatactgc aaattcttta aaaacggata atttaacttt
      721 tatgtttgtg cttgtttgta ttatatatat ttttgctgca cttacttttt tccagtgctt
      781 actttatcaa gcgttgcaga atatttatct ttatggcatt aaggagagtc aatgtctaaa
      841 aaacaaaata aactcattac aaaagaaatt ttaaataatg ccataaaagg agcattttta
      901 aaatttgatc cacgctttat ggtaaaaaat cctgttatgt ttatggtgga agttggatcg
      961 attcttactt tgattttaag tatttttcct actttgttta atggaaattc tgatgaaaga
     1021 atttataaca tcttaatcac ttttatttta tttataatct tgttttttgc aaattttgca
     1081 gaaagtattg cagaaggaag gggtaaagcc caagcagcta ccttaagaca aagcaaaaag
     1141 gattctaaag ctagacacat aaaaagtgat ggcagtgaag aaatgcttaa ttctagcgag
     1201 ttaaaaatag gtgatatagt tttagttaaa gcaggtgaac ttatacctaa tgatggagaa
     1261 attatagaag gtactgcaag tgttgatgaa tcagctatta caggtgaaag tgcacctgtt
     1321 atgcgtgaag cgggcggtga tttttcttct gttacaggtg ggactacggt tttaactgat
     1381 tttttaaaga ttaaaatttt agttggagct ggggaaagtt ttttagataa aatgatcaat
     1441 cttgtagaag gtgctgcgcg tcaaaaaact ccaaatgaaa ttgctcttaa tactctttta
     1501 attgtactta gtttgagttt tttgatggtg gttgtaagtt tatatccttt tatgcaattt
     1561 ttaggcgtga gtttgcctat ttcatggtta gtagcattgc ttgtatgtct tattcctaca
     1621 actatagggg gacttttatc agctatagga atagcaggta tggatagggt aacgcgtttt
     1681 aatgtgatcg cactttcagg caaggctgtt gaaagttgtg gtgatgttga tactatgatt
     1741 ttggataaaa caggaacgat tacttttgga aaccgtttgg caaatgaatt ttatgaagtc
     1801 caaggtataa gtaaagaaga aatgattaaa gcttgtgttt tatcctcttt aaaagatgaa
     1861 actccagaag gtaaaagcat agttgcattg gctcaaaaaa tgggttatga attagaaggt
     1921 aatgatatta aagaatttat cgaatttagc gctcaaaata gaatgagtgg tgtggatttg
     1981 caagataata caaaaattcg caaaggtgct tttgatgcta taagagctta tataagcgaa
     2041 atgaatggaa aaattcctag cgatttagaa actaaggtaa tggaaatttc aaatcttggc
     2101 ggcactcctt tggtagtgtg taaaaatgaa aaaattttag gagtgattta tctaaaggat
     2161 acagtaaaac caggacttaa agagcgcttt gatgagctta gaaaaatggg cataaaaact
     2221 ttaatgtgta ccggagataa tcctttaaca gcagctacta taactaaaga agcagggctt
     2281 gatggattta tagcagaatg caagcctgaa gataaaataa aagccattaa aaaagaacaa
     2341 gcccaaggta agatagtagc catgacagga gatggaacca atgatgctcc agttcttaca
     2401 caagctgatg taggtatagc tatgaactca ggaactcaag cagccaaaga agcagccaat
     2461 atgatagatc ttgattctaa tcctactaaa attttagaag tagttgaaat aggaaaaggt
     2521 ttgcttatta ctagaggtag tcttacaact tttagtatga caaatgatat tgctaagtat
     2581 tttgctattt tacctgctat gtttagtgtg gttttacctc aaatgcaaat tttaaatatt
     2641 atgcatttgg ctaccccgaa aagcgctatt ttatcagcac ttatttttaa tgctattatt
     2701 atacctttgc tcatacctat tgctatgcgt ggagttaaat ttaagcctat gaaaagcgag
     2761 catttgcttt taagaaattt gagtatttat ggtttaggtg gtatgatagc accttttata
     2821 gggataaaaa taattgatat tcctacagct tggatactta gaattttagg agtgtgatat
     2881 gcttagaaac tttgcttagt ttttttgtgg taatgctaat attgtgtact cttgtttatc
     2941 cttttgcttt aaatacagtt gcaaaattta tttttcctta tcaatcaagt ggaagtttag
     3001 tagataaaga aggtcgtccg actttggatg taagcaaagc ggtaggttca aagcttttgg
     3061 gtcaagattt taataaacct tattttctac attcaagaac atctgtgtca aattacaata
     3121 caagcgatac aaatgaaagc agtgtaagtt caggtggatt taattatgct atgtcaaatc
     3181 ctgctttaaa agagcgtgtg caaaaatatt tgcaaaaatt tttagatgaa aatccgcaaa
     3241 ttacaaaaga acaaattcct ttggatttca ggatcaggtc ttgatcctca tatcagtctt
     3301 caagcagccc tagtgcaaat tcctaggata agtcaatctt caaaaatcac caaagaagaa
     3361 ctagaaaaaa tcattcaaga aaatactgag tctaaatttt agggattttt ggggaagaaa
     3421 aggttaatgt tttagctgtt aatatagcta ttgctaaagc catgaaaaaa gaataaacat
     3481 gcaaagacaa agtcctgaac aaattcttaa aaaacttgag gttaaagcta aggaagaaga
     3541 aaaaaacaaa cttgtaaaat taaaaatttt cttaggttat gctgcaggtt ctggaaaaac
     3601 ttatgctatg ttaagtgaag ccagaacttt aagggataat ggagttgatg ttgttttagg
     3661 ctatatagag cctcacgata gacctgaaac aatggcttta gcacaaggtt ttgaaagtat
     3721 agctaatctt gaaattcctt ataaaaatat agtattaaaa gaatttgatt tagacgctac
     3781 ccttaagaga aagcctgctt tggttttagt agatgagctt gcacacacta atgctaaagg
     3841 cttgcgtaat gaaaagcgtt ttcaagatat agaagaactt ctaaaagcag ggattgatgt
     3901 ttatactact ttaaatatac aacatttaga aagcttaaat gatttagtcg ctaatatcag
     3961 taagatagaa gttaaagagc gtattcctga tcgtattttt gatgaggctg atcaggttga
     4021 acttgttgat attgaaccta ataagctttt aaaaagaatg caagatggta aaatttataa
     4081 ggaaaaacaa gctaaactag cacttgaaaa tttctttcgc caagaaagac ttatagcttt
     4141 gcgtgagatt gccttaagaa gacttgcttc aagagtgaat ttaagagcaa gtgaacaaag
     4201 gcttattaat gatgatttag cttatcatac tggagagcat attttagttt gtattaatgc
     4261 ttcaaatgca aaggttattc gtgcagctgc aagacttgct ttagcttttc atgctaaatt
     4321 gagtgcgctt tatataaaaa atcccaatat taaagaagca aaagccttag aagaaaatat
     4381 agaactagct aaaagttttg atgctaaaat cattagcgta tatgatgata tagcaagaca
     4441 aattgcagag tattcaagcc ttagcaatgt ctctaaaatt gttttaggca aaaataaaga
     4501 taaaaaaagt ttaaagaaga gatttttgaa gctgtcgcta aaaaagcacc cgatattgat
     4561 ttatatcttg tcaatgaaaa tcaaatttct actcctaaaa tacgaagtaa aaaaaagttt
     4621 tgatttttta ggttttttaa aaatcacagg agttttgctt ttagcaactt ttatagcttt
     4681 tgtatttcat aaatttaata ctcagccaag taatatagtt atgattttta ttttagcagt
     4741 ttttgcttct tcttttattt ctgataataa aattttcgcc ttttattctt ctttggtaag
     4801 tgttttgatt tataattttt tctttttaga acctattttt agtcttaaag ttcatgatag
     4861 tggaaatatt attactttta caactatgtt tatagttgga tttttaacag ctgtttttac
     4921 tagaagatta aaattgcaat ctaaagaact cactaaaagg gcttatagaa cagctatttt
     4981 acttgaaaat agtgaaaatt tagcaagagt gaaaagcaaa caagagcttt gggaacaact
     5041 tggaaatcaa gctttaaaat tattaaattt acctattatt atttatccta taaataaaaa
     5101 caatatttta tcgaaacctt tgttgttttt taacgatgat aagcaaatgt taaaaaattg
     5161 ttttagtgct gatgagattg ctattgctca atgggttgca acaaataaag aaagagcagg
     5221 tgtttgtaca aataccctac ctaatgctaa tgctatgtat ttacctatag aagatgggaa
     5281 aaaactaaag gggttatagg tatagtttta aaagaaaaac gtcccttgca agactttcag
     5341 tatgaaattt taagtgcttt acttaatgag gcaggagtta gaacaaggga tatattttta
     5401 ttataaatcc cttaatttat tgatctcatc tcttaaagtc gctgcttttt caaattcgag
     5461 cgctttagca gcttcaagca tttgtttacg aagctctttt acgattttag ctctttcatt
     5521 agcaggcatt ttttcaaatt ttttaccttt gcgataaatt tctcctaagt tttcttcatt
     5581 ttttaaactt tcttcgatgt gtcgcttgac tgaagttggc gtgatattgt gtttttgatt
     5641 gtaagcttct tgaagtttgc ggcgttcatt ggtggtatcc atagcttctt gcatggattt
     5701 tgtgattttt ttgcaaaaaa gcaaaacctt accattgaca tttctagcag ctcttcccat
     5761 ggtttggatt aaacttgtag tgcttcttaa aaaaccctcc ttatctgcgt ccataatggc
     5821 aataagcgaa acctcaggca aatcaagtcc ttctctaagt aagttaatgc caattagcat
     5881 atcaaaagca ccgcttctta agcctcttat gatttcattg cgttctattg catcgatatc
     5941 tgagtgcatg tatttgactt ttataccaag ctctaaataa taccttgtaa gctcttcagc
     6001 gagtttttta gtcagtacag ttactaaaac ccgttcgttt ctttgtatga tttttttagc
     6061 ttcatcaaat aaaatttcaa cttgattatc gctatcttta agttctatca aaggatcaag
     6121 taatcctgtt ggacgcataa tttgatgaaa gatattttcc ttgctaagtt caagctcaag
     6181 cggggcaggg gtggctgaaa caaaaagaaa ctgacaatct ttatggataa attcatcaaa
     6241 cattaaagga cgattatcaa gagctgatgg aagacgaaaa ccataatcta ctaaagtttg
     6301 ctttctactt ctatctcctg caaacatacc gcgaaattgt ggtaaagaaa catggctttc
     6361 atcgactatg acaagaaatt ttctattttt aatcgcaaaa taatcaaaaa gcgtataagg
     6421 agtatcgcct tctttaagtc ctgttagatg ccttgcatag ttttcaactc ctttacacat
     6481 tcctgtgctt gtaagcattt caagatcaaa ttcaacgcgt tgtttaaggc gttgatattc
     6541 tacgagttta ttttcatgct caaaataagc aaggcgttcg ttaagttctg tttttatgtc
     6601 ttttatcgct tgttttagcc ttgcttcgcc cacgctaaac tggcttgtag gatagagtat
     6661 aaagcgtttt aaatctttac cttttttatt ttctaaaaca ttgtaatgat acatagcatc
     6721 aagctcatcg ccaaaaaatt caagtcttac tacttcatct tcataataag ctggataaat
     6781 atctataata tctccttgaa ctctaaaatc tgcacgatca aaaaaattat catttctttt
     6841 ataacccata tctacaagtt tttttaaaag ttctttttgt gaaatttgca tacccagttc
     6901 aaagattaaa accatgccta tgtattcatt tggattacca agtccataat ttgctgaaac
     6961 actagctatg caaactacat cttcataact taaaagagaa gcagtagcac tcagtcttaa
     7021 acgctctaag tcttcattag tggagctgtc tttttctatg aaaacatcag tgcgtggaat
     7081 ataggcttca ggttgataat aatcataata agatataaaa tattccacat gatttttaga
     7141 aaaaaagcct ttaaattcgc tataaagttg tgcacaaagg cttttgttgt gactcatgat
     7201 aagagtgggt atattaagtt ctttaatgac atttgccatg gtaaaggttt ttccacttcc
     7261 tgtaacgcct agtaaggttt gatatttgtt gccttttttt atgcttttta ctatgccttt
     7321 tatggcttct tgttgatcgg gactgggttt aaattcgctg gtaagttcta acatttttct
     7381 actttatttt tatttttgaa aaaattttaa aagaaaatgc tttaattaaa aattaattga
     7441 caataaaaac ctaaatttaa atttttttct gctacaatat caaataatat tttccataaa
     7501 ttacaaattt tttaagaagg caaaaatatg tttgatgaaa aaataatcaa tactatgaca
     7561 gataaagtaa atgaactcat tgaaaaatat aacgaagttt gcgaagccaa tgaggcttta
     7621 agaaatgagc ttgtaagcgt taaagcacaa aatgaagcaa aaagtaatca aatcatgcgt
     7681 ttagaagaag aacttaaatc tcgcaatata gaaagcgaag atatttataa gaaaatagag
     7741 gctgttcttg gcagataatc taaaacaagt cattgttaat gttaatgcaa aagatttcat
     7801 tgttaagtgc agtgaagaat ttgcaaattt tttagaagat gatatcgctt tgatttctgg
     7861 cggtactaaa aaaatagaac ttaaacgctt tgtagatgcg tttgttaaaa aaagttatga
     7921 aaattatatt ttagaaagag aacttaagaa actaataaaa gcaatcaatg aagaactccc
     7981 gacaaaatga ataaagcttt tactctgctt gagcttgttt ttgtgatttt gattttggga
     8041 attttatcaa gcttatcttt atcttttatc aatactacaa aagatgaggt taaaatttta
     8101 aaattaaaaa tggactatga aatgctaagc tcagctcttg ctttaatgcg tagtcaaatg
     8161 agacttaaaa atttaaattt tccagaaatt ttagataatg cacaaaacaa tcaagccaaa
     8221 gaaaaactct tttattgttt aaatgattgt gattattctt tgcttgatac acctatttat
     8281 tctgatttta aatcttggat aaaaataggt aaaaatcact atagatttgc attaaacgcc
     8341 aaagagatgg ttgaatttat ttatgattct aaagaaggtt tgttaaagtg tataggaagt
     8401 tctagatgca aagatctgat ataagatatt atgaacttgc aatttgtggt ttgtatttgg
     8461 ataatttaac ttttcatagt tttgatgaaa tcaaaccttt aacacaagta ttagtggatt
     8521 taaaaactaa aaaaaacctt aaagctatcg tgcttaaaga atgtcaaaaa cctgatttta
     8581 aaaccgtaga aattaaagaa attacagagt attttctaac tcctttgcag tttgaattgg
     8641 caaattttat tgtttattat tatgcttcaa aacttggttt tgttttgggt ttttttgaaa
     8701 ctagtcctaa gtatgaatgt cacaaaatgt tttttaaaga tactcctaaa ctaagcaatc
     8761 aacaacaaaa tgccttaagt tttcttcaaa aagaaaataa ttccttgctt tttgctgata
     8821 cgggtagtgg caagactgaa atttatattt ctttgataaa agagtgttta gaacagggta
     8881 agcaagcttt gcttttgatg ccagaaatcg cacttactcc acaaatgcaa aagcgtttag
     8941 aagtgtattt taaggataat tttttcctgt ggcattctaa aatttcaaag aaaaaaaagc
     9001 aagaatattt agagcgtttt tgcaagggag aagtgctttt agtagcgggt gcaagatcgg
     9061 ctttgttttt accttttaga aatttaggac ttattgtagt agatgaagaa catgataatt
     9121 cttataaggc ttctaaccag ccttttatca atgcaagaga tttagcactt tttttgggtc
     9181 aaaaaaataa tattcaagtg attttaggtt ctgcaacccc atctttaacg agtttttaca
     9241 agcaaaagag ttttagactt aagggtactt tttttgaaag taaaaaacac tttttatatg
     9301 atgaaaacga attgggcgta actcctatgc ttttgggcga gttgcaaaaa agcttggaaa
     9361 atcaaaaaca agctatcatt tttttgccca ctaaggccaa ttttagacaa attgtgtgta
     9421 aagattgtgg gcaaactata aaatgtcctt tttgctctat tgctatgagt ttgcacaaaa
     9481 aaagaaatgt tttaaaatgt cattattgta attacacttc tttaatagag caaaattgtc
     9541 ctagctgcca aggtgtgatg ctagaggcta ggaagatggg cacagcagaa ttacaagaac
     9601 ttttgcaaga gactttgcct ttagcaagga tagctaaatt tgatagtgat gagattacga
     9661 gtattcgaaa gcttaatgct attttaaaag attttaatga aaataagatc gatatactta
     9721 taggaacttc catgcttgct aaaggacatg attatcatag tgtagattta agcgttattt
     9781 taggacttga tgagtatttg ttgcgtccta gttttagagc gagtgaagaa actttagctt
     9841 tagctatgca agttgctggt agggcagggc gtaaaggtga agcaagagtg cttttacaaa
     9901 caaaaaatag agcttttttt gaaaagtata tagaggatta tgatgctttt ttaaaagatg
     9961 agttagaaaa tagaaaagat ctttaccctc catttaaacg ccttttaaga attcttatag
    10021 aagataaaga tcaacaatcc tcacaaaagc tctgcgaaaa acttgcctat caatttaaaa
    10081 atatcaaaca agtagaatta gtaggctatg gaatttgtgg agttgaaatg ctgcatggaa
    10141 aatatcgttt ttatttattg cttagaagtg aaaatcacaa agctttagtg gcaattgaaa
    10201 attatatttt gcaatttaaa aatgtaagtg cggatattga ccctattgat tttgtgtaag
    10261 tgatataatt atttgtcttt atatattttt tcaaattctt tatagtatgt ccaagagtta
    10321 attatattgg gaaatttttg ctttaaatga tttagatcat tttcaaaaat attaaaaaaa
    10381 gtgtaaacaa gtgatttatt ttttataaaa taatctatta
//
LOCUS       DAPIVO010000060        10249 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.060, whole genome shotgun sequence.
ACCESSION   DAPIVO010000060 DAPIVO010000000
VERSION     DAPIVO010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10249)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10249)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10249
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.060"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..1911)
                     /gene="pflB"
                     /locus_tag="RJ239_001464"
     CDS             complement(<1..1911)
                     /gene="pflB"
                     /locus_tag="RJ239_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility protein PflB"
                     /protein_id="HDV7331570.1"
                     /translation="MAEQEDIILEKPEDGLNQPRLDESLEGFKGQEGQAPEDEEFASL
                     PEELPQENSESGFKFTRESAPEDVSTFEEVESQEPTPWYKDRKFMSLVGLSLGIICIL
                     VFTLFYLTFSEGKIKPDIIASKPLEQPVIMPDESYKYNDMQRIDGMIQKANALYLKGE
                     VEQALKVYEQVAVYNESLSNYNLGVSQMNENKFQEAFESFKKAIANGENQSVAAINAA
                     VCALKLNDKEKFRYYIDLAQVYLPKEGKSKLYDYYLSLINYYKGYYPEALQMLQRTDV
                     EPYSDVAKYLSAKIYAKMDFDSKAIQQLNSQGNFESSLSLGLLYARIGEYAKAKVALS
                     TAMKIERDFNQSLAALTLVDIKTGNYQDMLARLQNSYDNDKDRYKILDTYKIQVRLNK
                     DLFNIAVAQNSFSKDLLKKQKDQFDLLFYFAPYQVFDSKQAALYIKKANVTDFVDDST
                     DAGIYLNISKALSSTNVKIANIINYALNQKLRLANQEFQKLIKDYPEHSILHYNLALT
                     YAQMQNYELAYKHFSSSYHLNPKNYLAGAFAMFCAKLIDIDTTKLYNEILDNIAADSN
                     FKANMQKSMLFLVNNNYISMLPYLDETKKDTPLSLIFEAIVAKNNNLNNQVDVKIAKL
                     RSELPEDILANIL"
     gene            complement(1921..3156)
                     /gene="serS"
                     /locus_tag="RJ239_001465"
     CDS             complement(1921..3156)
                     /gene="serS"
                     /locus_tag="RJ239_001465"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HDV7331571.1"
                     /translation="MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKEKIA
                     LEEFQAFQNKFSKELATAEDKESLKAKLSENKSKINEQSAKVNALENELEEIAHAIPN
                     IPDECVPVGEDENENVELKKVLNPPSFDFTPKEHFELGESLNWLDFMRGVKISQSRFC
                     VLKNEGALLSRALVNYMIDFNRSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDD
                     EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQF
                     EKVELVSITKPEQSDSVFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEV
                     WLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIME
                     NYQDKEGKIHIPDVLKKYF"
     gene            complement(3167..4126)
                     /gene="trpS"
                     /locus_tag="RJ239_001466"
     CDS             complement(3167..4126)
                     /gene="trpS"
                     /locus_tag="RJ239_001466"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HDV7331572.1"
                     /translation="MRVLTGLQPSGDLHIGNYFGAIKQMVDAQEKSQMFMFIANYHAM
                     TSSQDGEKLKQNSLKAAAAFLSLGIDPQKSVFWLQSDVKEVMELYWILSQFTPMGLLE
                     RAHSYKDKVAKGLSASHGLFSYPVLMAADILLFDTRIVPVGKDQIQHVEIARDIALKV
                     NNEWGEIFTLPEARVNEEVAVVVGTDGAKMSKSYQNTIDIFSSEKTLKKQISSIVTDS
                     TALEDPKDHENCNIFKIAKLFLDESGQKELQIRYEKGGEGYGHFKIYLNELVNAYFKE
                     AREKYNELLEKPSHLKEILDFGATKARKIAQEKMQKIYEKIGL"
     gene            complement(4123..4620)
                     /locus_tag="RJ239_001467"
     CDS             complement(4123..4620)
                     /locus_tag="RJ239_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HDV7331573.1"
                     /translation="MMKAKNIVFIGFMGSGKSTLARALAKDLDLVFLDSDFLIEQKFN
                     QKVSEIFEQKGENFFREQEQKMADFFSSCEKACIATGGGFVNVSNLEKAGFCIYLKAD
                     FEYLKKRLDKDEISKRPLFYDEIKAKKLYNERLSKYEQKANFILNIENKNIDELLSEI
                     KKVIK"
     gene            complement(4607..5989)
                     /gene="der"
                     /locus_tag="RJ239_001468"
     CDS             complement(4607..5989)
                     /gene="der"
                     /locus_tag="RJ239_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HDV7331574.1"
                     /translation="MQSIILIGKPNVGKSSLFNRMARQRIAITSDISGTTRDTNKTQI
                     HIHSKKAMLIDSGGLDESDELFKNVKKNTLKVAKESDIILYLVDGKLAPDDEDRQFFY
                     SLKKLGKPIALVINKVDNKKDEERAWEFANFGVKEIFNLSVTHNVGLDELYEWLEKFL
                     HEEFLIPDEEENLEDFLEYYEEGKEFQFKEVDQNHIRVGIVGRVNVGKSSLLNALVKQ
                     ERSVVSSIAGTTIDPVNESVVHKDKVIEFVDTAGIRKRGKIQGLERFALNRTEKILSH
                     SQIALLVLDAHEGFNELDERIAGLVAKHYLGVIIVLNKWDKSEMDFDKTVKELRLDRF
                     KFLAYAPVISVSALSGKRVHVLLDKILQIFENFTQKIQTSKLNTLIENATRAHPLPHD
                     YGKLVKIYYAVQYDLAPPKIALIMNRPKALHFSYKRYLQNQIRKEFNFEGVPLVIASR
                     KKGSKENDES"
     gene            6091..7023
                     /locus_tag="RJ239_001469"
     CDS             6091..7023
                     /locus_tag="RJ239_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDV7331575.1"
                     /translation="MLKVIKHNLGIYFMILACLDFALMGACAKILSKEMSSIEIMFFR
                     NIIGIFFIVYLLKRSKAHKEGGYFWLLVFRGVVGTLSLYMFFYNVSNITLGGAFAFQK
                     TAPIFITLIAFVVFKENIGIKGWIGILIAFGGMLLIAQPWAHNLNHSGFDLKNSVIGI
                     TSGFLAALALTSVRELRKSYTTEQIAFSFILLGTLMPLISMISAEFFEPQHLDSLHLD
                     FILAPFVMPSLTAWLIIAIMGTLGTIYQIHVTKAYGIAKQAGVVAGVSYLDVVFSMIV
                     GIILGDNLPSTMVFLGIIGIIFGGLILVKNKGKK"
     gene            7020..7835
                     /gene="kdsA"
                     /locus_tag="RJ239_001470"
     CDS             7020..7835
                     /gene="kdsA"
                     /locus_tag="RJ239_001470"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002827952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HDV7331576.1"
                     /translation="MKKMILIAGPCVIESKDLIFKVAEQLKNFNENPNIEFYFKSSFD
                     KANRTSINSFRGPGLEEGLKILQSVKDEFGMKILTDIHESNQANPVSEVADVLQIPAF
                     LCRQTDLLVAAAKTKAKINIKKGQFLNPSDIKYSVKKVLQTRGIEDEGYEAAQRNGVF
                     VAERGASFGYGNLVVDMRSLVIMREFAPVIFDATHSVQMPGAAGGSSGGKSEFVEPLA
                     RAAAAVGIDGFFFETHINPCEALCDGPNMLNLTRLKNCVNTLLEIQNIIKENK"
     gene            7832..8296
                     /locus_tag="RJ239_001471"
     CDS             7832..8296
                     /locus_tag="RJ239_001471"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HDV7331577.1"
                     /translation="MNIIEGKLNLDSNTKIAIINARFNHIITDRLVEGAKDAFLRHGG
                     KEENLSLILVPGAFELPYALKKAIESKKFDAICCVGAVIRGSTPHFDYVSAETTKGIA
                     NVSLNHNIPVSFGVLTTDTIEQAIERAGSKAGNKGFEAMTTVIEMLNLSKEL"
     gene            8296..8694
                     /gene="nusB"
                     /locus_tag="RJ239_001472"
     CDS             8296..8694
                     /gene="nusB"
                     /locus_tag="RJ239_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HDV7331578.1"
                     /translation="MATRHQVRQSVISLLYAFELNSQNNVFVDEILDEKKIRNEQKNF
                     TLNLYNGILDNLNNIDETLNSFLNDNQITALGHVERAILRLGAYELLFTDTPSAIVIN
                     EAIELAKELANDNSPKFINGVLDALIKAKK"
     gene            8691..9530
                     /gene="pyrF"
                     /locus_tag="RJ239_001473"
     CDS             8691..9530
                     /gene="pyrF"
                     /locus_tag="RJ239_001473"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HDV7331579.1"
                     /translation="MKLCVALDLSTKEECLQLAKELKNLDIWLKVGLRAYLRDGFKFI
                     EELKKVDDFKIFLDLKFHDIPNTMADACEEVSKLGVDMINIHASAGKIAIQEVMTRLS
                     KFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVCSVFESKK
                     IKEHTSSNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIVVGRPIYKNENPRAV
                     CEKILNKIHRKNISENDIEQNYEVIQQKEWDMCNHFEEWIKTRPDKEHALKEFYAKCG
                     IKY"
     gene            9527..>10249
                     /locus_tag="RJ239_001474"
     CDS             9527..>10249
                     /locus_tag="RJ239_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331580.1"
                     /translation="MNYQQLECDYFNLYNQFLSVDFQISLFEKDHKGLIKDFIFFYYQ
                     ILKQKDLSYLLEVRNKISLKVYNYMQEHSTSPKDLSLICLRENKHIEFFQIFYKALAY
                     FVAFRKKLDGEQKIKNLISNINDCFGYHFLNSDFNNLQNFQKSDLFTLPEKHLKYFHF
                     AMIHLCFMVLNPLNFKDSNRHLDKAINYLVDGTFEIYELIFKEYFLLFSKDKELKDEL
                     RKLKKLEFKILMQETSKIKLLNH"
BASE COUNT         3452 a         1737 c         1457 g         3603 t
ORIGIN      
        1 caaaatattt gccaaaatat cttcaggcaa ctctgaacgc aatttagcaa ttttcacatc
       61 tacttgatta ttaaggttat tatttttagc aacaatagct tcaaaaatca aactcaaagg
      121 cgtatctttt tttgtttcat ctaaataagg aagcatagaa atataattat tattaactaa
      181 aaataacata cttttttgca tattagcttt aaaattagaa tcagcagcta tattatcaag
      241 aatttcattg taaagtttag ttgtatcaat atcaattaat tttgcacaaa acatagcaaa
      301 agcacctgct aagtaatttt taggattaag atgatatgaa cttgaaaaat gcttataagc
      361 aagttcataa ttttgcattt gggcataagt taaagccaaa ttataatgta aaatactatg
      421 ttctggataa tccttgataa gtttttgaaa ttcttggtta gcaaggcgta acttctgatt
      481 taatgcatag ttaataatat tggcaatttt tacattggta gatgaaagag ccttgcttat
      541 attaagataa attcccgcat cagtactatc atcaacgaaa tctgtaacat tagctttttt
      601 aatatataaa gcagcctgct tactatcaaa aacctgataa ggtgcaaaat aaaaaagcaa
      661 atcgaattga tctttttgtt tttttagcaa atcttttgaa aaagaatttt gagcaactgc
      721 tatattaaaa agatccttat ttaaacgaac ttgaatttta taagtatcta aaatcttata
      781 tctatcttta tcgttatcat aagaattttg caagcgcgct aacatatctt gataatttcc
      841 tgttttaata tcaaccaatg ttaaagccgc caaactctga ttaaaatctc tttcaatttt
      901 catcgctgta cttaaagcga ctttagcttt agcatattct cctattctag cgtataaaag
      961 acctaaagat aaactagatt caaaattgcc ttgagaattt aattgctgta tagccttgga
     1021 atcaaagtcc atttttgcat aaattttagc agacaaatac tttgcaacat cagaatacgg
     1081 ctccacatct gttctttgta acatttgtaa ggcctcaggg taatatcctt tgtaataatt
     1141 aatcaagctt aaataataat catataattt tgattttcct tcttttggaa gatacacttg
     1201 agctaaatca atataatatc taaatttttc cttatcatta agctttaaag cacaaacagc
     1261 agcattgata gcagctacac tttgattttc tccattggct atagctttct tgaagctttc
     1321 aaaagcttct tggaatttat tctcattcat ttgagaaacg cctaaattat aattagataa
     1381 agattcatta tatacggcaa cttgctcata aacttttaaa gcctgttcaa cctcaccctt
     1441 taaatataaa gcatttgctt tttggatcat accatcaatt ctttgcatat cattgtattt
     1501 atatgattca tcaggcataa taacaggttg ttctaaaggc ttagaagcta taatatctgg
     1561 tttaattttt ccttcactaa aagttaaata aaaaagtgta aaaactaaaa tacaaataat
     1621 ccccaaagat aaacccacaa gagacataaa cttacgatct ttataccaag gcgtaggctc
     1681 ttgactttca acttcttcaa aagttgatac atcttcaggc gcactttctc ttgtaaattt
     1741 aaaaccactt tcactatttt cttgaggtaa ttcttctggc aatgatgcaa attcttcatc
     1801 ttctggagct tgcccctctt gccctttaaa tccctctaaa ctctcatcaa gtcttggttg
     1861 atttaagcca tcttcgggtt tttctagtat tatatcttct tgttcagcca tctatactct
     1921 ttaaaaatat tttttcaaaa catcaggaat atgaattttt ccttctttat cttgataatt
     1981 ttccataatc gctaccaagg ttcttcctac tgccaaagat gagccattaa gagtgtggac
     2041 gagttcattt tttccttgtt cgtttttata gcgaatttta gcgcgtcttg cttgaaaatc
     2101 acgacaattt gaaaccgagc tgatctcacg atatttattc tgtcctggaa gccacacttc
     2161 aagatctaca gtttttgctg cactaaaacc caaatctcca gtgcaaagca tcaaatgtct
     2221 atgcgctaaa cctaaagaac tcagcaaatc acttgcacac tcaagcattt cattaaacac
     2281 actatcactt tgctcaggtt tagtgatact tacaagctct actttttcaa actggtgttg
     2341 tcttataata ccccttgtat cacgccctgc actgcctgct tcttttctaa aacaagcact
     2401 ataacaagtc atttttatag gtaaagtttc actcgctaaa atttctccgc tgtaaagatt
     2461 ggttactgga atttcagaag ttgagatcaa atacaaatcc tcatcatcta ccttatacat
     2521 atcttcttta aattttggca actgacccgt cccaaacata gtagcaccat ttaccaaaaa
     2581 aggtacatta acaaattcaa atccacgact tctattaaaa tctatcatat aatttaccaa
     2641 agcacggctt aataaagctc cttcattttt aagcacacaa aaacgacttt gtgaaatttt
     2701 taccccacgc ataaaatcaa gccaatttaa actctcgcct aattcaaaat gttcttttgg
     2761 agtaaaatca aagctaggtg gatttaaaac ttttttaagc tccacatttt cattttcatc
     2821 ttcacccaca ggcacacatt catcagggat atttgggatg gcatgagcga tttcctcaag
     2881 ctcattttct aaagcattta ctttagcgct ttgctcatta attttgcttt tattttcgct
     2941 taattttgct tttaaacttt ctttatcttc ggctgtagca agctctttac tgaatttatt
     3001 ttgaaaagct tgaaattctt ccaaggctat tttttctttt tttaaacttg caaaaagttc
     3061 agcaagtttt tttaagatat tttcatcaac ttttttattt tttaactttt tagccacttc
     3121 atcaaaatta ttttgcaaat tttttaaatc tagcattttc tactccttaa agtccgattt
     3181 tttcataaat tttttgcatt ttttcttggg cgatttttct tgcttttgtc gcaccaaaat
     3241 ccaaaatttc tttcaaatgc gaaggctttt ctaaaagctc attatatttt tctcttgctt
     3301 ctttaaaata agcatttaca agctcgttta aatatatttt aaaatgtcca taaccctcac
     3361 cacctttttc atagcgtatt tgtaattctt tttgccctga ttcatctaaa aaaagctttg
     3421 cgattttaaa aatattgcag ttttcatgat cttttggatc ttctaaagcg gtactatctg
     3481 taactatgga agaaatttgt ttttttaagg ttttttcact gctaaaaata tctatagtat
     3541 tttgataaga tttactcatt tttgctccat cagtacccac aaccacagct acttcttcat
     3601 taactctcgc ttctggaagg gtaaaaattt caccccattc attattaact tttaaagcaa
     3661 tatcgcgtgc gatttcaaca tgctggattt gatcttttcc tacagggaca attcgtgtat
     3721 caaaaagtaa aatatctgcc gccattaaaa caggataaga aaaaagccca tgtgaagcac
     3781 taagtccctt agcaacttta tccttgtaac tatgtgcacg ctctaataaa cccataggag
     3841 taaattgcga taaaatccaa taaagctcca taacttcctt aacatcactt tgcaaccaaa
     3901 aaacgctttt ttgaggatct ataccaaggc ttaaaaaagc cgcagcagct tttaaggaat
     3961 tttgtttaag tttttctcca tcttgagaag aagtcatggc atgataatta gcaataaaca
     4021 taaacatttg gcttttttct tgtgcatcta ccatttgctt aatcgcacca aaataattac
     4081 ctatatgcaa atcgccactt ggctgaaggc ctgttaatac tctcatttta tcaccttttt
     4141 aatctcgctt aaaagctcat ctatattttt attttctata tttaaaataa aatttgcctt
     4201 ttgttcatac ttgcttaaac gctcattata taattttttt gctttaattt catcataaaa
     4261 taaaggtctt ttagaaattt catctttgtc taaacgcttt tttaaatatt caaaatctgc
     4321 ttttaaataa atacaaaaac ctgctttttc taaatttgaa acattaacaa aacccccacc
     4381 tgtagcaata caagctttct cacaagaact aaaaaaatca gccatttttt gctcttgttc
     4441 tctaaaaaaa ttttcccctt tttgttcaaa aatttcactg actttttgat taaatttttg
     4501 ttctattaaa aaatcactat ctaaaaaaac aagatctaaa tccttagcta aagctcttgc
     4561 taaagtgctt tttccagaac ccataaatcc tataaaaacg atatttttag ctttcatcat
     4621 tttctttact gcccttttta cgcgaagcaa tcactaaagg cacaccttca aaattaaatt
     4681 cttttctgat ttgattttgt aaataacgct tatagctaaa atgcaaggcc ttaggacgat
     4741 tcataataag tgcaattttt ggcggtgcta agtcatattg tactgcataa taaattttaa
     4801 ccaatttccc ataatcatgc ggcaaaggat gtgctcttgt ggcattttct atcaaggtat
     4861 taagcttaga agtttggatt ttttgagtga aattttcaaa aatttgcaaa attttatcga
     4921 gtaaaacatg cacccttttt ccacttaaag ctgatacgct aatcacgggt gcgtaagcta
     4981 gaaatttaaa acgatcaaga cgcaattctt ttacagtctt atcaaaatcc atctcacttt
     5041 tatcccattt atttaaaaca ataatcacac ccaaataatg cttagccaca agcccagcaa
     5101 tgcgttcatc aagctcgtta aagccctcat gcgcatctaa aaccaaaagt gctatttgag
     5161 aatgagataa aattttttcc gtgcgattta gggcaaagcg ttcgagtcct tgaattttac
     5221 ccctttttct aatacctgca gtatcaacaa attctatcac tttatcttta tgaactacac
     5281 tttcattaac aggatctata gtagttcctg caatagaact tacaacactg cgttcttgtt
     5341 taaccaaagc atttaaaaga cttgattttc caacatttac acgccctaca atacccactc
     5401 tgatatgatt ttgatcgact tctttaaatt gaaattcttt tccttcttca taatactcta
     5461 aaaaatcttc taaattttct tcttcatcgg ggattaaaaa ctcttcatgt aaaaattttt
     5521 caagccattc ataaagttca tctaagccta cattatgggt tactgaaaga ttaaagattt
     5581 cctttacgcc aaaatttgca aactcccaag ccctttcttc atctttttta ttatctactt
     5641 tattaatcac taaggctata ggttttccaa gtttttttaa agaataaaaa aactgtctat
     5701 cctcatcatc aggcgctaat ttcccatcaa ctagataaag tatgatatcg ctttctttag
     5761 ctacttttaa agtgtttttt ttcacatttt taaaaagttc atcactttca tcaagccctc
     5821 cactatcaat aagcatggct ttttttgaat gaatatgaat ttgcgtttta tttgtatctc
     5881 tagttgtgcc tgaaatatca cttgtaatag ctattctttg tcttgccatt ctattaaaaa
     5941 ggcttgattt tcccacattt ggcttaccta taagtataat gctttgcatt tttttcctag
     6001 aaaattatat ttttaaaatt atataaaatt tggcttaata ttaagcaaaa aaagactaga
     6061 attaacccag attttagtca aggaaaaaaa atgctaaaag taatcaagca taatttagga
     6121 atttatttca tgattttagc atgtttggat tttgcactta tgggagcttg tgcaaaaatt
     6181 cttagcaagg aaatgagttc tatagaaatt atgtttttta gaaatatcat aggaattttt
     6241 ttcatagtct atcttttaaa acgatctaag gcacataaag aagggggata tttttggctc
     6301 ttggtatttc gtggagtagt aggcacgctt tcactatata tgtttttcta taatgtttca
     6361 aatattacac taggtggagc ttttgctttt caaaaaactg ctcctatttt tattacttta
     6421 atagcttttg ttgtttttaa agaaaatatt ggcatcaaag gctggatagg aattttaata
     6481 gcatttggtg gaatgctttt aatcgctcag ccttgggctc ataatttaaa tcattcaggc
     6541 tttgatttaa aaaattcagt tataggtatc acgagtggat ttttagccgc tttagctctt
     6601 acaagtgtaa gagaacttag aaaatcttac actacagaac aaattgcctt ttcttttatc
     6661 cttttaggaa ccttaatgcc tttaatttct atgatcagtg ctgaattttt tgaaccacag
     6721 catcttgatt ctttacattt agatttcatt ctagcacctt ttgtgatgcc aagtcttaca
     6781 gcttggctta tcattgccat tatgggaact ttaggcacca tttatcaaat tcatgtcact
     6841 aaagcttatg gtatcgctaa acaagcagga gtggttgccg gagttagtta tcttgatgta
     6901 gtatttagta tgatagttgg gataattttg ggagataatt taccaagtac tatggttttt
     6961 ttaggtataa taggcattat ttttggtgga ttaattttag ttaagaacaa aggaaaaaaa
     7021 tgaaaaaaat gatactcatt gctggtcctt gcgtgataga aagcaaagat ttgattttta
     7081 aagttgctga acagttaaaa aattttaatg aaaatccaaa tatagaattt tatttcaaat
     7141 caagttttga taaggccaat cgcacaagta ttaattcttt tcgaggtcct ggtcttgaag
     7201 aaggattaaa aattttacaa agcgtaaaag atgaatttgg tatgaaaatc ttaaccgata
     7261 tacacgaaag caatcaagca aaccctgtaa gtgaagtagc tgatgtcttg caaattcctg
     7321 cttttttatg tcgtcaaacc gatttacttg tagccgcagc aaaaactaag gcaaaaatta
     7381 atatcaaaaa aggacaattt ttaaacccaa gcgatatcaa atacagcgtt aaaaaagttc
     7441 tacaaacccg tggtatagaa gatgaaggct atgaagctgc tcaaagaaat ggtgtttttg
     7501 tagctgaaag aggggctagc tttggctatg gaaatttagt agtagatatg cgttctttag
     7561 ttatcatgcg tgaatttgct ccagttattt ttgatgctac ccatagcgta caaatgccag
     7621 gggctgcagg tggaagtagc ggagggaaaa gcgaatttgt agaaccttta gcaagagcgg
     7681 cagcagccgt aggcatagat ggctttttct ttgaaacaca tattaatcct tgcgaggctt
     7741 tatgcgatgg acctaatatg cttaatctta cacgccttaa aaattgcgtt aatacattac
     7801 tagaaataca aaatatcata aaggaaaaca aatgaatatt attgaaggaa aattaaattt
     7861 agactcaaat acaaaaattg ctatcattaa tgcaagattt aatcatatca tcacagatcg
     7921 ccttgtagaa ggagcaaaag atgctttttt aagacacggg ggcaaagagg aaaatctaag
     7981 ccttatactt gttcctggtg cttttgaact tccgtatgcg ttaaaaaaag ctatagaaag
     8041 caaaaaattt gatgcaattt gttgcgtagg cgcagtaatt cgtggctcaa ctccgcattt
     8101 tgactatgtt tcagcagaaa ccaccaaagg catagccaat gtgagtttaa atcataatat
     8161 ccctgtaagc tttggtgttt taactacaga tacaatagaa caagccatag aaagagctgg
     8221 aagcaaagca ggcaataaag gctttgaagc tatgacaact gtaatcgaga tgttaaattt
     8281 aagcaaggag ctttaatggc aacgcgtcat caagttcgcc aaagcgtcat ctccttactt
     8341 tatgcttttg aattaaattc tcaaaacaac gtttttgtag atgaaatttt agatgaaaaa
     8401 aaaatacgca atgaacaaaa aaattttact ttaaatttat ataatggaat tttagataat
     8461 ttaaacaata ttgatgaaac cttaaattca tttctaaatg ataatcaaat tacagcttta
     8521 ggacatgtag aaagagctat actaagactt ggagcttatg agttactttt taccgatact
     8581 cctagcgcca ttgtcatcaa tgaggctata gaacttgcta aagaacttgc taatgacaat
     8641 tctccaaaat ttataaatgg agttttagat gccttaataa aggctaaaaa atgaagcttt
     8701 gtgtcgcact tgatctttct acaaaagaag aatgcttaca acttgccaaa gaattaaaaa
     8761 atttagacat atggttaaaa gtaggtttaa gagcatattt aagagatggt tttaaattca
     8821 tagaagaact taaaaaagtt gatgatttta aaatatttct tgatcttaaa tttcatgata
     8881 ttcccaacac tatggcagat gcttgcgaag aagtatcaaa acttggtgtt gatatgatca
     8941 atatccacgc aagtgctgga aaaatagcca tacaagaagt tatgacacgg cttagcaaat
     9001 tttcaaaaag acctttagtt ttagcagttt ctgctcttac gagttttgat gaagaaaatt
     9061 tctttagtat ttatagacaa aaaattgaag aagctgtaat taatttttca aaaatatcct
     9121 atgaaaatgg acttgatggt atggtatgct ctgtttttga aagcaaaaaa attaaagagc
     9181 acacaagttc aaatttctta acccttactc ctggaattcg tccttttgga gaaacaaatg
     9241 atgatcaaaa acgtgttgct aatcttgcaa tggctagaga aaatttgagt gattatatcg
     9301 ttgtgggaag gcctatatat aaaaatgaaa atcctagggc tgtatgtgaa aaaattttaa
     9361 acaaaataca cagaaaaaat ataagcgaaa acgatataga gcaaaattat gaagtaattc
     9421 agcaaaaaga atgggatatg tgtaatcact ttgaagaatg gattaaaact cggcctgata
     9481 aagaacatgc tttaaaagaa ttttatgcta agtgtgggat aaaatattga attatcaaca
     9541 attagaatgc gattacttta atctttacaa tcagtttctt agcgtggatt ttcaaatttc
     9601 attatttgaa aaagatcata aaggtttaat taaagatttt atattttttt attatcaaat
     9661 tttaaaacaa aaagacttga gctacttgct tgaggtaaga aataaaattt ccctgaaagt
     9721 ttataattat atgcaagagc actccacttc tccaaaagat ttaagtctta tttgtctaag
     9781 agaaaataaa catattgaat tttttcaaat attttacaag gctctcgctt attttgtagc
     9841 ctttagaaaa aaacttgatg gagaacaaaa aattaaaaat ttgatttcaa atatcaatga
     9901 ctgttttggc tatcatttct tgaattctga ctttaacaat cttcaaaatt ttcaaaaaag
     9961 cgatttgttc accttacctg aaaaacatct taaatatttt cacttcgcca tgattcatct
    10021 ttgtttcatg gttttaaatc ctttaaattt taaagactct aatcggcatc ttgataaagc
    10081 gattaattat cttgtcgatg gaacttttga aatttatgag ctcatcttta aagaatattt
    10141 tttattgttt tcaaaagata aagagctcaa ggatgaactt agaaaattaa aaaaattaga
    10201 atttaaaatt ctaatgcaag aaacttcaaa aattaaacta cttaatcat
//
LOCUS       DAPIVO010000061        10164 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.061, whole genome shotgun sequence.
ACCESSION   DAPIVO010000061 DAPIVO010000000
VERSION     DAPIVO010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10164)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10164)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10164
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.061"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..639)
                     /locus_tag="RJ239_001475"
     CDS             complement(<1..639)
                     /locus_tag="RJ239_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(A) polymerase"
                     /protein_id="HDV7331581.1"
                     /translation="MDLKSLENNRLYILKRLGILKFLSIIEALLIGFLAFVFIRDALI
                     AVILAVFVGVFFFRFTAKKLKLAQKELQIDALNLFLRRFGAKFKKQSLSQKDFLKLGL
                     TKDLKEFKSQNCFEFKDFKIYDIQFLDENKRFFCGILLEILNANKNPSFENEEQIYIK
                     LTDKNFTLNHIFSKENRYLIATLSNPFFIDVKKDLESNFKDLEENLNSIKNKL"
     gene            complement(639..2447)
                     /gene="typA"
                     /locus_tag="RJ239_001476"
     CDS             complement(639..2447)
                     /gene="typA"
                     /locus_tag="RJ239_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HDV7331582.1"
                     /translation="MENIRNIAVIAHVDHGKTTMVDELLKQSGTFSEREQISERVMDS
                     NDIEKERGITILSKNTAINYKGTKINIIDTPGHADFGGEVERVLKMIDGVLLLVDAQE
                     GVMPQTKFVVKKALSLGLKPIVVINKIDKPAADPERVINEIFDLFVALDANDEQLDFA
                     IVYAAAKNGYAKLDLNDESDNMEPLFKTILERVPAPSGSDENPLQLQVFTLGYDNFVG
                     KIGIARIFNGVVKKNQSVMLAKADGTKVNGRISKLIGFMGLEKMDIEEAGSGDIVAIA
                     GFEALDVGDSVVDPNNPMPLDPLHIEEPTLSIVFSVNDGPLAGTEGKHVTSNKIAERL
                     EAEMKTNIAMKYESTGEGKFKVSGRGELQITILAENMRREGFEFCMGRPEVIVKVEDG
                     VKTEPFEHLVIDVPEEFSGAVIEKLGKRKAEMKTMAPTGDGQTRLEFEIPARGLIGFR
                     SQFLTDTKGEGVMNHSFLEFRPFSGAVEKRNNGALISMENGVALGYSLFNLQERGVLF
                     IEPQTKVYTGMIIGEHSRPNDLDVNPIKGKNLTNVRASGSDDAIKLVPPRKLSLERAL
                     EWIEEDELVEVTPVNVRVRKRYLDPTQRKRMEKAKS"
     gene            2582..2905
                     /locus_tag="RJ239_001477"
     CDS             2582..2905
                     /locus_tag="RJ239_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331583.1"
                     /translation="MSKPLNEEIFIEFKSDLAERKNEVLLQVLELLETFRSDKNEKMA
                     RISSELTEILENEENLEKILNAKNLEELLNILIALNEDKMIKVYEDSYLKEKFPNVMV
                     DKFLK"
     gene            2923..4716
                     /locus_tag="RJ239_001478"
     CDS             2923..4716
                     /locus_tag="RJ239_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HDV7331584.1"
                     /translation="MMSNLAPQNDVLNLTPSKTSTTSSSFSKTSKNKEHESSDSKNST
                     QDDTESFLNSLLNSINETNEFLPDHMKISQKEVVNEAMSRLQKGAFDESDKISIFESA
                     SFMQILSLLDKLKTDTADVKLANLSTQLSSLIKTEANFNALKGASNLSELLDIAKDLG
                     LNVKNIKVDRLLDLKATFPNLDKADFFKGAVDNVFKEIINNKISNVSKNLNHNLENTT
                     HTTSTHSMQKTNSKDSGSLLSQTLKNLDSILSSKESKHEKNDKVKSKIEEDTTDAKNT
                     LKNIKNDEFAKNLTEELNIKDKKNQDNLNKESKDLNKDFNKELNKNQEKNNLNQENIQ
                     DQNKNLKNNDQNLNLDKNLNKEIVKDTQKLVSNLTQKDFNLNKEPKNNNKENKDIKQN
                     FFDQKLNFENLNKTQVVQNKENNANFNNNTTNKETFTQEQTKTHSENVDKNSLDELNS
                     LVKDLNKVTQNNARNITPKETLQYFSQDLKEAVDQYKAPITKLSITLNPNNLGEVEVT
                     LIQRGNNLHINFNSNANAMNLFIQNQAEFKNSLVNMGFTGLEMNFSDQGKREQNQNQG
                     KNRSGYGFKDALDGKNESEKVNLELVLAKYF"
     gene            4770..5654
                     /locus_tag="RJ239_001479"
     CDS             4770..5654
                     /locus_tag="RJ239_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod modification protein"
                     /protein_id="HDV7331585.1"
                     /translation="MISSSDWNLNTTATTSGTTSSGSTSGTTRTDSSSSSGIVSNPNA
                     TLDKDAFLKLLLIELQHQDPTDPMDSDKMLTQTSQLSALEMQQNTNTTMQKMVETMQK
                     LSDSFSTSMSTSALGAIGKMATVSDNKIKLTGADELIALKMYLPEDSDENGVTLEIYD
                     SNNKLVFSEKSDAKSISQGLFTMEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKITANY
                     GTYPIEGVVFKDGVAYAKMAGQEVPFDAIQEITDYKLGSSSSTGGSGSSGDSSGGSSD
                     GDSSGSGSTEDGDKEEKA"
     gene            5658..7295
                     /locus_tag="RJ239_001480"
     CDS             5658..7295
                     /locus_tag="RJ239_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HDV7331586.1"
                     /translation="MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDI
                     FYTTITTQSTNPAQGGYGSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGN
                     AYYTRNGSFRRDANGYLVDSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNN
                     GFTVNSNNSFSIGTTASQGAIKVPVNMYLPPQVTQNVKWSGSLNTNTTTEVVKVDLDP
                     SKFNITKTEDGKYVVSGSVSKEDVFSAKAGDRIILNFTDDNGVKTSFEATLDENLNFK
                     SNELDLKGLDENSIKLDTAQISTEQQKANKDILESPIYNADGSKSTLRVTLERVLPQE
                     GDNIQYKAIAQIYDSNGNAVGNPTEGNMVFDKNGALLQNNITSIANPNGGTINIDLGS
                     PYDANKPGSGYSGIYIKQGVEKNVVTQQDGVAEGFFEQYNISDDGSIVAQFSNGKNAI
                     VGKLALYNFINEQGLVAMGDNIFAATANSGDASFIMKDGQVVNTAKFKGGFLEQSNVD
                     LSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR"
     gene            complement(7299..9170)
                     /locus_tag="RJ239_001481"
     CDS             complement(7299..9170)
                     /locus_tag="RJ239_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF342 domain-containing protein"
                     /protein_id="HDV7331587.1"
                     /translation="MNFQVKTLETFNPFESLNHEQANTEQILDFRVIDFKLLCSSVKP
                     AKTKTYERKDFDLFYADDFFVKNYNTIVQKFLIEIYPKTQSFPFTVKLRSNSNLTHLK
                     ASINLTENFKYYPNLKFDILQNIYKIMIKQKFLILRLDKNLFDKIDDFILSIQKSPSI
                     KEIELEIAKGVDKIEHKSDEIIYHRDVNEECFDENINYDEGNYCKPIEKNELLFEYIY
                     RILGKEGRNLRGEILHLNPIAFLDNPFIIKDESIYTEELEDRIKYFSANYGFLNKDHT
                     GYCIANNLKLSQIGLKTTGSIKTNIDENINLEITNFDISDDAIKSGIVNVQASNIKVN
                     GNVGATKLYGKNISIKGLTHAKSEIFAQDIFITTHKGTLQADTVYIKNLENGTIIAKN
                     VFVENCMGGKIEAENIYICNLLTDNTLYPRKNLIITNNIKFKNNIVVSPLVSIENNSD
                     TECENLKNLSLKIKSKLDDTISKMQNYYDYLIKNQIKIIKLQKTKNPNAIEMKFSNLY
                     HDIIKKYNHLSISYKKFIKLKYQIDAKLNFLNEMVYNVKIYIKAENIGEDNFLKFYPN
                     TNTNLELKHHINLKDYEKVLYLEKGQQVSYIKSSHNYSESDIEEIKIIFEKLEKDNS"
     gene            complement(9171..9890)
                     /locus_tag="RJ239_001482"
     CDS             complement(9171..9890)
                     /locus_tag="RJ239_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HDV7331588.1"
                     /translation="MEVKWSRDFSIKNMQLDKQHELIFEITNLANDLALNIQDNNTQH
                     KNDLKQILVKLFQYIKIHFKDEEKFMESIDFPLIEEHKKSHQILVEKTKKLLEHSDNI
                     VKMSQELSILTKDWILDHFANEDLWIANFTKKALHLQEIHYTLEQYIKLKSIKQDLRA
                     EKTYDYICNCSLRIHAVPQTIHQELVSKENTLKCEKCGQILVHLDYFDLNQNFEKFNA
                     IFEDALQNHHFTTQKNDMGGG"
     gene            10070..10161
                     /gene="ffs"
                     /locus_tag="RJ239_001483"
     ncRNA           10070..10161
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="RJ239_001483"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
BASE COUNT         3508 a         1477 c         1589 g         3590 t
ORIGIN      
        1 tagtttgttt tttatagaat ttagattttc ttctaaatct ttgaaattgc tttctaaatc
       61 tttttttaca tctataaaaa aaggattgct taaagtagcg ataagataac gattttcttt
      121 agaaaagata tgatttaaag tgaaattttt atctgtaagt ttgatataaa tttgttcttc
      181 gttttcaaag ctaggatttt tgtttgcatt taaaatttcg agtaaaattc cacaaaaaaa
      241 gcgtttgttt tcgtccaaaa actgaatatc ataaatttta aaatccttaa attcaaagca
      301 gttttgactt ttaaattctt tcaaatcctt tgtaagtcct agttttaaaa agtctttttg
      361 acttaaactt tgctttttaa atttcgcccc aaaacgacgc aaaaataaat ttaaagcatc
      421 aatttgcaat tctttttgtg cgagttttag ttttttagct gtaaaacgaa agaaaaaaac
      481 acctacaaaa acagctaaaa ttactgcgat taaggcatct cttataaaaa caaaggctaa
      541 aaagcctata agtaaggctt cgataatgct taggaatttt aagattccta agcgtttaag
      601 tatataaagt ctattatttt ctaagctttt taaatccatt aagattttgc tttttccatt
      661 ctttttcttt gagttgggtc aagatagcgt ttgcgaacac gcacatttac aggtgtaact
      721 tctacaagtt catcttcttc tatccactct aaagctcttt caagacttaa ttttctaggt
      781 ggcacaagct tgattgcatc atcgcttccg cttgctctta cattggtaag attctttcct
      841 ttgataggat taacatctaa atcatttgga cgagagtgct cacctataat cataccagta
      901 taaactttag tttgaggctc tatgaaaagc actccacgct cttgaaggtt aaacaaagaa
      961 taccccaaag ccacgccatt ttccatagaa attaaagctc cattgttacg cttttcaacc
     1021 gcgccgctaa aaggacggaa ttctaaaaag ctatgattca tcacgccttc gcctttagta
     1081 tcggttaaaa attggcttct aaaacctata agtccgcgtg ctggaatttc aaactcaagt
     1141 cttgtttgtc catctcctgt tggtgccatg gttttcattt cagcttttct tttgccaagt
     1201 ttttctatta ctgcaccgct aaattcttca ggcacatcga taactaaatg ttcaaaaggt
     1261 tctgttttaa ctccatcttc aacttttacg ataacttcag gtcttcccat gcaaaactca
     1321 aaaccttcac gacgcatatt ttcagctaaa atagtgattt gaagttcgcc cctaccgctt
     1381 actttaaatt taccttcgcc tgtgctttcg tatttcatag caatattagt tttcatttca
     1441 gcttctaaac gttcagcgat tttatttgaa gttacatgtt ttccttcagt tcctgctaat
     1501 ggtccatcat ttacagaaaa tactatgctt aaagtcggct cttcaatgtg taaaggatca
     1561 agtggcatag gattgtttgg atctacaacg ctatcaccca catctaaagc ttcaaaacct
     1621 gctatagcta cgatatctcc acttcctgct tcttcgatgt ccattttttc taagcccata
     1681 aagccaatga gttttgaaat tctaccattt accttggtac catcagcttt tgcaagcatt
     1741 acgctttggt ttttcttcac aaccccattg aaaattctag caatgcctat tttacctacg
     1801 aaattatcat accccaaagt gaaaacttga agctgcaaag gattttcatc actaccactt
     1861 ggagctggaa cgcgttcaag tatggtttta aaaagtggct ccatattatc actttcatcg
     1921 tttagatcaa gcttagcata accatttttt gctgcagcat aaactatagc aaagtcaagt
     1981 tgctcatcgt ttgcatctag ggctacaaaa agatcaaaaa tttcattgat cactctttca
     2041 ggatcagcag ctggtttgtc tattttgttg attacaacta taggtttaag ccctaaagat
     2101 aaagcttttt taaccacgaa tttagtttgc ggcataacgc cttcttgagc atctactaaa
     2161 agcaaaactc catcaatcat ttttaaaacg cgttctactt ctccgccaaa atcagcatgc
     2221 cctggagtat ctatgatgtt gatttttgta cctttgtaat tgatcgctgt gttttttgaa
     2281 agtatggtaa tgccacgttc tttttctata tcgttgctat ccataacgcg ttctgaaatt
     2341 tgttctcttt cgctaaaggt gcctgattgt tttaataatt catctaccat agtggtttta
     2401 ccatggtcaa cgtgagctat aactgctata tttctaatgt tttccaaatt ttcttctcca
     2461 aagctaaatt tttaaaagct tagattatac aaaaatttaa cttaaactac aaagcatcaa
     2521 aacttggaac acttcttgct ttaaagactt gtgaaattaa aattttaaaa aggaagttaa
     2581 aatgtcaaaa ccattaaatg aagagatttt tattgaattt aaaagcgatt tagctgagag
     2641 aaaaaatgaa gttttacttc aagttttaga acttttagaa acttttagat cagataaaaa
     2701 tgaaaaaatg gcaagaattt caagtgagct tacagaaatt ttagaaaatg aagaaaattt
     2761 agaaaaaatt ttaaatgcta aaaatttaga agagctttta aatattttaa ttgctttaaa
     2821 tgaagataag atgattaaag tatatgaaga ttcttatttg aaagaaaaat ttcctaatgt
     2881 aatggtagat aaatttttaa aataattttt tttgaaggaa aagtgatgtc aaatttagct
     2941 ccgcaaaatg atgttttaaa tcttacgccg agtaaaactt ctactactag cagttctttt
     3001 agtaaaacta gtaaaaataa agaacatgaa agtagtgata gtaaaaattc aactcaagat
     3061 gatacggaaa gttttttaaa ttctttgctt aattctatca atgaaaccaa tgaattttta
     3121 cctgatcata tgaagatcag tcaaaaagaa gttgttaatg aagcgatgag cagacttcaa
     3181 aaaggagctt ttgatgagag cgataagata agcattttcg aatctgcttc ttttatgcaa
     3241 attctttctt tgttagataa gctaaaaaca gatacagcag atgttaaact agcaaatctt
     3301 tctactcaac tttcaagtct tattaaaaca gaggctaatt ttaatgcttt aaaaggtgca
     3361 tcaaatctta gtgagctttt ggacatagct aaagatctgg gcttaaatgt aaaaaatatt
     3421 aaagtagatc gtcttcttga tcttaaagca acttttccaa atttagataa ggctgatttt
     3481 tttaagggtg ctgtggataa tgtttttaaa gaaatcatca ataataaaat ttccaatgtg
     3541 agtaaaaatt taaatcacaa tttagaaaat acaactcata ctacaagcac tcattctatg
     3601 caaaaaacaa attctaaaga tagcggttct ttgctttctc aaactttaaa aaatttagat
     3661 tccatacttt catccaaaga aagcaaacac gaaaaaaacg ataaagttaa atcaaaaata
     3721 gaagaagata ccacagatgc taaaaatact ttaaaaaata tcaaaaatga tgagtttgca
     3781 aaaaatttaa cagaagagtt aaatataaaa gataaaaaaa accaagataa tttaaataaa
     3841 gaaagcaaag acttaaacaa agattttaat aaagagttaa ataaaaatca agaaaaaaac
     3901 aatttaaatc aagaaaatat acaagatcaa aataaaaatt taaagaacaa tgatcaaaat
     3961 ttaaatcttg ataaaaattt aaataaagaa attgtcaaag atactcagaa attagtttca
     4021 aatttaacac aaaaagattt taatctaaat aaagagccta aaaacaacaa caaagaaaat
     4081 aaagatataa aacaaaattt ctttgatcaa aaattaaatt ttgaaaattt aaataaaact
     4141 caagtagttc aaaacaaaga gaataatgca aattttaata ataatactac taataaagaa
     4201 acttttactc aagagcaaac aaaaacgcac agtgaaaatg tagataaaaa tagcttagat
     4261 gagttaaatt ctttagtcaa agatttaaat aaagtaacac aaaacaatgc tcgcaatatc
     4321 actcctaaag aaactttgca gtatttttca caagatttaa aagaggctgt ggatcaatac
     4381 aaagcgccta ttactaaact tagtatcact ctaaatccta ataatcttgg agaagtggag
     4441 gtaactttga tacaaagagg taataacctt catatcaatt tcaactccaa tgccaatgca
     4501 atgaatttgt ttatccaaaa tcaagccgag tttaaaaatt ctcttgtaaa tatgggattt
     4561 actggacttg aaatgaattt tagtgatcaa ggtaaaagag agcaaaatca aaatcaagga
     4621 aaaaatcgta gtggatatgg ttttaaagat gctttagatg gaaaaaatga aagtgaaaaa
     4681 gtcaatctag agcttgtttt agcgaagtat ttttaaattg gaacacttat tgcttaaata
     4741 ataaaaaact aaataaaaag gagtttataa tgatatcatc atcggattgg aatttaaata
     4801 ccactgctac aacttcaggt actacttctt caggaagtac tagtggaaca actagaacag
     4861 attcaagcag tagctcagga atagtgagca atccaaatgc taccttagat aaggatgcgt
     4921 ttttaaaact tcttttgata gagcttcaac atcaagatcc aacagatcct atggatagcg
     4981 ataaaatgct tactcaaact tcacagctta gtgcacttga aatgcagcaa aataccaata
     5041 caactatgca aaaaatggtt gaaactatgc aaaagctttc tgattctttt agtacaagta
     5101 tgagtacttc agctttaggg gctattggta aaatggcaac tgtttcagat aataaaatca
     5161 aacttacagg tgcagatgag cttatcgctc ttaaaatgta tttgcctgaa gattctgatg
     5221 aaaacggtgt tacgctagaa atttatgata gcaataataa acttgttttc agtgaaaaaa
     5281 gcgatgctaa atctatttct caaggtttat ttactatgga gtggccagga agaaataacg
     5341 atggggttta tgcaggtgat ggtgagtaca ctgttaaaat ggtttataat aataaaaatg
     5401 gtgaaaaaat cactgcaaat tacggaactt atcctatcga aggtgttgtt tttaaagatg
     5461 gtgttgccta tgcaaaaatg gctggacaag aagttccttt tgatgcaata caagaaataa
     5521 cagattataa gcttggttca tcttcatcta ctggaggaag cggttcaagt ggagactcaa
     5581 gtggtggttc aagcgatgga gattcttctg ggtctggatc tacagaagat ggcgacaaag
     5641 aggaaaaggc ataagccatg atgaattcat tttataatgg gatttctgga gtaaaaagca
     5701 atagctttgg tattgatatc actgctaata acatagcaaa tgtcaatacc acgggcttta
     5761 aatactctga tgctcaattt aaagatattt tttatactac cataacaacc caatcaacca
     5821 accctgctca aggtggttat ggtagcggtg cagcatcttc tcaagttgtt ttcgaacagg
     5881 gttctcctgt tgcaagtgat ggcgaatttg atgtggcttt gcaaggaaaa ggattttttg
     5941 gggttttagg ggctgatggc aatgcttact atactagaaa tggatcattt agaagagatg
     6001 ccaatggata tttggtagat tcttatggaa attttgtttt aggaacaatg aatcctgctt
     6061 ttactggtat taactatagc gatagagttg ctgggcttat gggggattat cttaacacag
     6121 gaactccggt aaataatggt tttactgtaa attcaaataa ttctttcagt ataggcacaa
     6181 ccgcttctca aggggctatt aaagtacctg tgaatatgta tttacctcct caagtaactc
     6241 aaaatgtaaa atggagtgga agtttaaata ctaacacaac aacagaagta gttaaagtag
     6301 atcttgatcc tagtaaattt aacattacaa aaactgaaga tggaaaatat gtagttagtg
     6361 gtagtgttag caaagaagat gtgtttagtg ctaaagcggg tgataggatt attttaaatt
     6421 tcactgatga taatggcgta aaaacaagct ttgaagcgac tttagatgaa aatctaaatt
     6481 ttaaaagtaa cgagcttgat ttaaaaggat tggatgaaaa tagcatcaag cttgatacag
     6541 ctcaaatttc aacagagcaa caaaaagcca ataaagatat tttagaatcc cctatttata
     6601 atgcagatgg aagtaaaagc actttaaggg ttacacttga aagagtttta ccgcaagaag
     6661 gcgataatat acaatataaa gctattgcac aaatttatga ttctaatggc aatgccgtag
     6721 gcaatccgac tgaaggaaat atggtttttg ataaaaatgg tgctttgctt caaaacaata
     6781 ttacaagcat tgcaaatcca aatggtggaa caattaatat tgatttaggt tctccttatg
     6841 atgctaacaa gcctggttcg ggttatagtg ggatttatat taaacaaggc gtcgaaaaaa
     6901 atgtagttac acaacaagat ggtgtagctg aagggttttt tgaacaatat aatatatccg
     6961 atgatggaag tattgttgcg caatttagca atggtaaaaa tgccatagtt ggaaagcttg
     7021 ctttatataa ttttatcaat gagcaaggat tagttgctat gggagataat atttttgcag
     7081 caacggcaaa tagcggtgat gcaagtttta ttatgaaaga tggtcaagtt gttaatacag
     7141 ctaaatttaa aggcggattc ttagaacaat caaatgttga tttaagcgca gagctttcaa
     7201 accttatcgt aactcaaaaa gcctttgatg caagctcaaa aagtatcact acaagtgatc
     7261 agatgataca aaaagccatt aatatgaaaa gataattctt aggaattatc tttttctaat
     7321 ttttcaaaaa taattttaat ttcttctatg tcgctttcgc tataattatg gcttgattta
     7381 atataactta cttgctgtcc tttttcaaga tataaaacct tttcatagtc ttttaaattt
     7441 atatgatgtt ttagttcaag gttggtgttt gtgttaggat aaaattttaa aaaattatcc
     7501 tctccgatat tttcggcttt tatgtatatt tttacattgt aaaccatttc atttaagaaa
     7561 tttaatttcg catcaatttg atattttaat tttataaatt ttttatacga aatgctaaga
     7621 tgattgtatt tttttatgat atcgtgataa agatttgaaa atttcatttc tatggcgtta
     7681 ggatttttag tcttttgaag tttgatgatt ttgatttgat ttttgattag ataatcatag
     7741 taattttgca ttttgcttat ggtgtcatca agcttacttt ttattttaag gcttagattt
     7801 ttaagatttt cgcattctgt atctgagttg ttttcaatag aaactagtgg tgaaactacg
     7861 atattgtttt taaattttat attgtttgtt atgattagat tttttcttgg atataaagta
     7921 ttatccgtta gtaaattgca aatataaata ttttctgctt ctatttttcc acccatgcag
     7981 ttttcaacaa atacattttt agctataatt gtcccatttt ctaaattttt tatatataca
     8041 gtgtcagctt gcaaagttcc tttgtgtgtt gtaataaaaa tatcttgtgc aaaaatttcg
     8101 ctttttgcat gagttaagcc tttgatactg atattttttc cataaagttt tgttgctcca
     8161 acattcccat ttacttttat atttgaagct tgaacattta caatacctga tttaatagca
     8221 tcatcactta tatcaaaatt agtgatttct aagtttatat tttcatcgat atttgttttg
     8281 attgaaccgg ttgttttaag ccctatttgt gataatttta aattatttgc gatacaatat
     8341 cctgtatgat ctttgtttaa aaatccataa ttggcgctaa aatatttaat tctatcttct
     8401 aattcttctg tgtaaatgct ttcatctttt atgataaaag gattatcaag aaaggctatt
     8461 ggatttaaat gaagtatctc tcctcttaaa tttcgtcctt cttttccaag aattctataa
     8521 atgtattcaa aaagtagctc atttttttca ataggtttac agtagtttcc ttcatcatag
     8581 ttaatatttt cgtcaaaaca ttcttcgtta acatctctat gataaataat ttcatcactt
     8641 ttatgttcaa tcttatctac acctttggca atttcaagct ctatttcttt aatagatgga
     8701 cttttttgta ttgataagat aaaatcatca atcttgtcaa ataaattttt atcaagtctt
     8761 aagattaaaa atttttgttt gatcattatt ttgtagatat tttgtaaaat atcaaatttt
     8821 aaattaggat aatatttaaa attttctgta aggttgatac tggcttttag atgggttagg
     8881 ttggagttgg atctaagttt gactgtaaaa ggaaaacttt gggtttttgg gtaaatttct
     8941 ataagaaatt tttgcactat ggtattgtag ttttttacaa aaaaatcatc tgcataaaat
     9001 aagtcaaaat cctttctttc ataagttttt gtttttgctg gttttacact agaacacaga
     9061 agtttaaaat ctataactct aaaatcaaga atttgttctg tgtttgcttg ttcgtgattt
     9121 aaactttcga aaggattgaa agtttctaag gtttttactt gaaaattcat ctatcccccc
     9181 cccatatcat ttttttgagt cgtgaaatgg tgattttgta gtgcatcttc aaaaatagca
     9241 ttgaattttt cgaaattttg attcaaatca aaataatcca aatgaactaa aatttgccca
     9301 catttttcgc actttaaggt attttctttg ctaacaagct cttgatgtat agtctgtgga
     9361 actgcatgga tacgcaaaga acaattgcaa atataatcat aggttttttc agctcttagg
     9421 tcttgtttga ttgattttag ttttatgtat tgttctaagg tataatggat ttcttgaagg
     9481 tgtagggctt tttttgtaaa attagctatc cataaatctt cattagcaaa atgatctaaa
     9541 atccaatctt tggttaatat ggaaagttct tgagacattt ttacaatatt atctgaatgc
     9601 tctaaaagct ttttggtttt ttctactaat atttgatgag attttttatg ttcttcaatc
     9661 aaaggaaaat caatgctttc cataaatttt tcttcatctt taaaatgaat tttgatgtat
     9721 tgaaatagct ttacaagaat ttgttttaaa tcatttttgt gttgtgtatt attatcttga
     9781 atgtttagag ctaaatcatt tgcaagattg gtaatttcaa aaattagttc gtgttgtttg
     9841 tctaattgca tatttttaat gctaaaatct ctactccatt taacttccat atttttcctt
     9901 tttggatgta ataattattt ttatatcgta ttttttgaaa ataaaataat aatttgacaa
     9961 atgaattttt aaaattctta taaaaacaat ggattgattg caaatttata tattgaatct
    10021 taacaactca aggcttttta agtatattat gatataattt ttaagccttt tcttagacct
    10081 gtgcaatgct atttttaagc accgcttcag ggtgggaaca cagcagagca cttgatttta
    10141 gtgtgtgccg cagttatctg ggga
//
LOCUS       DAPIVO010000062        10061 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.062, whole genome shotgun sequence.
ACCESSION   DAPIVO010000062 DAPIVO010000000
VERSION     DAPIVO010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10061)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10061)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10061
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.062"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(188..2785)
                     /gene="flgE"
                     /locus_tag="RJ239_001484"
     CDS             complement(188..2785)
                     /gene="flgE"
                     /locus_tag="RJ239_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HDV7331589.1"
                     /translation="MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTM
                     FSQTVKIATAPTDGRGGSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFF
                     MVSDDGGLTNYLTRSGDFKLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRTPQNIFID
                     PGMHIPAAKSTEVAIKANLNSGLNIGTSSRNLYALDSVHGWNTKTQRAEDENDTGTTQ
                     FYTTSKNSVEVTEKGVDAGSLFNAKGQGLNLRDGQGIWVSYADATYSTNKVGVNAFDP
                     NLQQNQTAAFWGTANQKVNLDITLNGVRIQNADIQSIDDAIAYINTFTAPTDTRDGTG
                     VKAVKNKDGSGIDFVNDNADGTTDNMKNINLVVANTNTAGELWNAVWDNNNQTFTFNN
                     NGNGQAGTPTINKNGSSLWTATNITFTPQPPQAATNVQLTGGLNAQIITAHKYIYSSN
                     PVDIGPMYNPDGGPVFQPGANATTRPTEPGSAAYWDAVNGGLLNTNVRTFRTTEDLRE
                     LLQRDARYGVDYDGSGTFAAADINQNIKVVVTADGHFAISNANEQSTVPPNAINGVGN
                     ATTTDPKNMSFNITAYSNKQGTVSTNDAFTAIFKAFDGPLVIGNQIKESEQLKLSAFS
                     AGLEIYDSLGSKHTLEVQFVKQSTTQDGGNEWQMIIRVPEPAEINTTGEGPNNIIVGT
                     ARFNNDGSLASYTPRTINFSPNNGAAPNQQIKLSFGTSGSNDGLVSSNSASTLTGQAT
                     DGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVT
                     ANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQM
                     LQTLIQLKQ"
     gene            complement(2988..3470)
                     /gene="ruvC"
                     /locus_tag="RJ239_001485"
     CDS             complement(2988..3470)
                     /gene="ruvC"
                     /locus_tag="RJ239_001485"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HDV7331590.1"
                     /translation="MNLKILGIDPGSRNCGYAIIEANKGKNILIEAGLIKIKPSTLQY
                     QITELCEGLDLIFKNHSFDEVAIEDIFFAYNPKTVLKLAQFRGALSLKILQIHGDFAE
                     YTPLQVKKAVTGKAKATKEQVAFMVKRLLGLSKDIKPLDITDAIAVALTHAANLRVRV
                     "
     gene            3566..4888
                     /gene="dnaA"
                     /locus_tag="RJ239_001486"
     CDS             3566..4888
                     /gene="dnaA"
                     /locus_tag="RJ239_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HDV7331591.1"
                     /translation="MNPSQILENLKKELSENEYENYLSNLKFNEKQSKADLLVFNAPN
                     ELMAKFIQTKYGKKIAHFYEVQSGNKAIINIQAQSAKQSNKSTKIDIAHIKAQSTILN
                     PSFTFESFVVGDSNKYAYGACKAIIHKDKLGKLYNPIFVYGPTGLGKTHLLQAVGNAS
                     LEMGKKVIYATSENFINDFTSNLKNGSLDKFHEKYRNCDVLLIDDVQFLGKTDKIQEE
                     FFFIFNEIKNNDGQIIMTSDNPPNMLKGITERLKSRFAHGIIADITPPQLDTKIAIIR
                     KKCEFNDINLSNDIINYIATSLGDNIREIEGIIISLNAYATILGQEITLELAKSVMKD
                     HIKEKKENITIDDILSLVCKEFNIKPSDVKSNKKTQNIVTARRIVIYLARALTALTMP
                     QLANYFEMKDHTAISHNVKKITEMIENDGSLKAKIEELKNKILVKSQS"
     gene            5048..6115
                     /locus_tag="RJ239_001487"
     CDS             5048..6115
                     /locus_tag="RJ239_001487"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HDV7331592.1"
                     /translation="MKLSINKNTLESAVILCNAYVEKKDSSTITSHLFFHADEDKLLI
                     RASDYEIGINYKIKKIRVESSGFATANAKSIADVIKSLNNEEVVLETIDNFLFIRQKS
                     TKYKLPMFNHEDFPNFPNTEGKNQFDIDSSDLSRSLKKILPSIDTNNPKYSLNGAFLD
                     IKTDKINFVGTDTKRLAIYTLEKANNQEFSFSIPKKAIMEMQKLFYEKIEIFYDQNML
                     IAKNENFEFFTKLINDKFPDYEKVIPKTFKQELSFSTEDFIDSLKKISVVTEKMRLHF
                     NKDKIIFEGISLDNMEAKTELEIQTGVSEEFNLTIKIKYLLDFLTSIEEEKFTLSVNE
                     PNSAFIVKSQGLSMIIMPMIL"
     gene            6144..8453
                     /gene="gyrB"
                     /locus_tag="RJ239_001488"
     CDS             6144..8453
                     /gene="gyrB"
                     /locus_tag="RJ239_001488"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HDV7331593.1"
                     /translation="MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVD
                     NSIDEAMAGHCDTIDVEITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGK
                     FDKDTYKVSGGLHGVGVSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGVIGKSK
                     KTGTTIEFWPDDQIFEVTEFDYEILAKRFRELAYLNPKITINFKDNRVGKHESFHFEG
                     GISQFVTDLNKKEALTKAIFFSVDEEDVNVEVALLYNDTYSENLLSFVNNIKTPDGGT
                     HEAGFRMGLTRVISNYIEANASAREKDNKITGDDVREGLIAIVSVKVPEPQFEGQTKG
                     KLGSTYVRPIVSKASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKE
                     SLSVGTLPGKLADCQSKDPSESEIYLVEGDSAGGSAKQGRERSFQAILPLRGKILNVE
                     KARLDKILKSEQIQNMITAFGCGIGEDFDLSKLRYHKIIIMTDADVDGSHIQTLLLTF
                     FFRFMNELVTNGHIYLAQPPLYLYKKAKKQIYLKDEKALSEYLIETGIEGLNYEGIGM
                     NDLKDYLKIVAAYRAILKDLEKRFNVISVIRYMIENSNLVKANNEELFSVIKQFLETQ
                     GHNILNHYINENEIRAFVQTQNGLEELVINEELFTHPLYEEASYIFDKIKDRGLEFDK
                     DILEVLEDVETNAKKGATIQRYKGLGEMNPEQLWETTMDPSVRRLLKITIEDAQSAND
                     TFNLFMGDEVEPRRDYIQAHAKDVKHLDV"
     gene            complement(8481..8822)
                     /locus_tag="RJ239_001489"
     CDS             complement(8481..8822)
                     /locus_tag="RJ239_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monoheme cytochrome C"
                     /protein_id="HDV7331594.1"
                     /translation="MKKIILILALFLSASWAQNLEINPDTGLIIDPDSPLVEANCLAC
                     HGSNLITNMHASRKAWLAAIRWMQDSEGLWEIEPEDEEKILNYLEKYYGEKYDTRRRI
                     PLAILLQNKTH"
     gene            complement(8825..>10061)
                     /locus_tag="RJ239_001490"
     CDS             complement(8825..>10061)
                     /locus_tag="RJ239_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sulfite oxidase"
                     /protein_id="HDV7331595.1"
                     /translation="KQNDQKENRRDFLKNIGLGLFGISVLSNFSFENFLGSKALAKEL
                     PDFKIEGKKDLIYHGEKPLTAETEIYALDSDFTKPENFFVRNNGLPPSLETIKERLHK
                     GWTLEIDGESIINKKSYTIEDLKKKFKTYTYALTVECGGNGRSEVIPSTKGTQWGYGA
                     VACGRWTGVRLKDILKDCGIKNDAVYIGYYGIDTKLNGEETSPISRGVPISKALQDET
                     LIAWAYEGKDIPLVNGYPLRLVCGGYPASTSGKWLYKISVRNKIHDGEKMEGSYKVPV
                     NPVKPGDFNYKGEMKIIESMPIRSVITNIKNGSEIKANKKFEVRGKAWAGELEVSEVY
                     VSNDYGVTWTKAKVEKPLNRLAWQKWSAQISIPTKGYYEIWARAIDSQGNSQPMVLAQ
                     WNPGGYINNACHRVNVYGV"
BASE COUNT         3506 a         1648 c         1607 g         3300 t
ORIGIN      
        1 aaaaatttat atcacattgc tgaaaatttt attgcaaccc acccctagca agagtgagtt
       61 agcaataaat tgaaggcagt tcaagcctaa gcctagtatt acaagactac caagataggc
      121 ttgtaaagca aggcttgctc ccttaaaggg agcaaaaaac aatattttat agaatactaa
      181 gcttaaatta ttgtttaagc tggattagag tttggagcat ttgatcactc gttgaaatgg
      241 tttttgagtt tgcttgataa cctctttgaa tgataataag ctctgttaaa gaacgactta
      301 aatccacatt tgacatttca agagctgagg ttttcatctc accacgacct cctgttcctg
      361 cttcacctac cacgatatta ccactatttg cagtaacttt aaaaagattt ccaccaattt
      421 cctcaagacc tgagttattt gccactgaag ccattgcgat ttttgctaca gcaaaggttt
      481 tgccattagt aaattcacct aagatattac ctttatcatc cacacggata gcatcaggtt
      541 ttaagttacc tgaagtataa ccatcagttg cctgtcctgt tagagttgaa gcagaatttg
      601 agcttacaag gccgtcattg cttccacttg ttccaaagga aagtttgatt tgttgatttg
      661 gtgcggcacc attgtttggt gagaaattta tcgttcttgg tgtataacta gctaaagagc
      721 cgtcattgtt aaatctagct gttcctacga tgatattgtt tggtccttcg cctgtagtgt
      781 taatctctgc aggttcaggt acacggatga tcatttgcca ttcattaccc ccatcttgag
      841 tggtactttg cttaacaaac tgcacttcta aagtgtgttt tgaacctaaa gaatcataaa
      901 tttcaagccc cgccgaaaaa gcagaaagct taagttgttc gctttctttg atctgatttc
      961 ctataaccaa aggaccatcg aaagctttaa aaatagcagt gaaagcatca ttagtactta
     1021 cagttccttg tttgttacta taagctgtta tattaaaact catatttttt ggatctgttg
     1081 tagtggcatt tcctacacca ttaatagcat ttggtggaac agttgattgt tcattagcat
     1141 tggaaatagc aaaatgtcca tctgccgtta ctactacttt tatattttga ttaatatcag
     1201 ctgcagcaaa agttccactt ccatcataat caaccccata tctagcatcc ctttgtaaaa
     1261 gttctcttaa atcttctgtg gttctaaaag ttcttacatt agtatttaaa agtccaccat
     1321 taacagcatc ccaataagct gctgaacctg gttcagttgg tcttgtagtt gcattagcac
     1381 caggctggaa tactggtcca ccgtcaggat tatacatagg acctatatcc acagggtttg
     1441 aactataaat atatttatgt gctgttatta tttgtgcatt tagtccacca gtaagctgaa
     1501 cattcgtagc tgcttgagga ggttgtggtg taaatgtaat atttgtagct gtccacaaag
     1561 aagaaccatt tttattaata gtcggtgttc cagcctgtcc attaccatta ttattaaatg
     1621 taaatgtttg attgttgtta tcccatacag cattccaaag ctcacctgct gtattggtat
     1681 tggcaaccac aagattgata tttttcatat tatctgtagt accatcggca ttatcattga
     1741 caaaatcaat tccactacca tccttatttt taaccgcttt tacacctgtt ccatcccttg
     1801 tatccgttgg tgcagtaaag gtattgatat aagcaatagc atcatcaata ctttgaatat
     1861 cagcattttg aattctaacc ccatttaaag ttatatctaa attcactttt tgattagctg
     1921 ttccccaaaa agcagcagtt tgattttgct gtaaatttgg atcaaaagca tttactccta
     1981 ctttattggt agaatatgtt gcatctgcat aagataccca aattccttgt ccatctctaa
     2041 gattaagtcc ttgtcctttc gcgttaaaaa gtgatcccgc atccacaccc ttttctgtca
     2101 cttctacaga attcttagaa gtcgtataaa actgagtagt tcctgtatca ttttcatctt
     2161 ctgctctttg ggttttagta ttccatccat gaacagaatc aagtgcataa agatttctac
     2221 ttgaagttcc tatatttaaa ccactattta aattcgcttt gatagcaact tcagtagatt
     2281 ttgctgcagg gatatgcata cctggatcga taaaaatatt ttgtggagtt cttgaactat
     2341 ctatagtttg atcatcccag ttgatattcc acccttggac aacaaaacct gcattattaa
     2401 caaaatttcc ataagcatct agtttaaaat ccccgctcct tgtaagatag tttgtaagac
     2461 caccatcatc gcttaccata aaaaaaccat cgccatttat agcaacgtca gtgtttttat
     2521 ctgtggtttg aactgaacct tgagaatgaa ttctagttgt agaacttact gaaacgccaa
     2581 gaccgatttg aagtggatta gatccacctc ttccatcagt tggagctgta gcgattttca
     2641 cagtttggct aaacatagtc ccaaaatctg cacgggagta tttaaaacca gtggtattaa
     2701 catttgaaat gttattacct tcaacatcca tcgcaacttg atgtgcttgt agtccgctta
     2761 cgccagacca aagtgatctc atcatcttaa atcctttata aaatattgct ttaaaaattt
     2821 aacgctttgg ctttaaaaaa cttttgcgtt tatgtgaagt ttacaagcaa gttctgttcc
     2881 aacttttgaa attttttatg aattttttaa aaatttatag aaaaaattta aaggtatttt
     2941 gggagtttat gaagctttgg tcttttgtgt aatgaaaatt accaaaatca caccctaact
     3001 cttaaatttg ctgcatgggt taaagccact gcgatagcat ctgtgatgtc taaaggcttg
     3061 atatctttac taagtcctaa aagccttttt accataaaag caacttgttc tttagttgct
     3121 ttggcttttc ctgtaacggc ttttttcact tgtaagggag tgtattctgc aaagtctcca
     3181 tgaatttgaa gaatttttaa agatagggct ccacgaaatt gtgcgagttt taaaacggtt
     3241 tttggattgt aagcaaaaaa gatatcttct atagccacct catcaaaaga atgattttta
     3301 aaaatcaagt ccaaaccctc gcaaagctct gtgatttgat actgtaaggt acttggcttt
     3361 atctttataa gtcctgcttc tatgagaatg ttttttcctt tgttggcttc tatgatagca
     3421 taaccacaat ttcttgaacc tggatctata cctaaaattt tcaaattcat accttttgaa
     3481 aaataaaata cgaaagcgga ttttaacctt tttttataaa atttaagata aaatttatac
     3541 attatgcaaa atttaaagag agattatgaa tccaagccaa atacttgaaa atttaaaaaa
     3601 agaattaagt gaaaacgaat acgaaaacta tttatcaaat ttaaaattca acgaaaaaca
     3661 aagcaaagca gatcttttag tttttaacgc tccaaatgaa ctcatggcta aattcataca
     3721 aacaaaatac ggtaaaaaaa tcgcacattt ttatgaagtg caaagtggaa ataaagccat
     3781 tataaatata caagcacaaa gtgctaaaca aagtaacaaa agcacaaaaa tcgacatagc
     3841 tcatataaaa gcacaaagca cgattttaaa tccttctttt acttttgaaa gttttgttgt
     3901 gggggattct aacaaatacg cttatggagc atgtaaagct ataatacata aagacaagct
     3961 tggaaaactt tataatccta tctttgttta tgggcctaca ggacttggaa aaacacattt
     4021 acttcaagca gttggaaatg caagcttaga aatgggaaaa aaagttattt acgctaccag
     4081 tgaaaatttt atcaatgatt ttacttcaaa tttaaaaaat ggctctttag ataaatttca
     4141 tgaaaaatat agaaactgcg atgttttact tatagatgat gtgcagtttt taggaaaaac
     4201 cgataaaatt caagaagaat ttttctttat atttaatgaa atcaaaaata acgatggaca
     4261 aatcatcatg acttcagaca atccacccaa tatgctaaaa ggtataaccg aacgcttaaa
     4321 aagtcgtttt gcacatggga tcatagctga tataactcca cctcaactag atacaaaaat
     4381 agccatcata agaaaaaaat gtgaatttaa cgatatcaat ctttctaatg atatcataaa
     4441 ctatatcgcc acttctttag gggataatat aagagaaatc gaaggtatca tcataagttt
     4501 aaatgcttat gcaaccatac taggacaaga aatcacactc gaacttgcca aaagtgtgat
     4561 gaaagatcat atcaaagaaa agaaagaaaa tatcactata gatgacattt tatctttggt
     4621 atgtaaagaa tttaacatca aaccaagcga tgtgaaatcc aataaaaaaa ctcaaaatat
     4681 agtcacagca agacgcattg tgatttacct agctagggca cttacggctt tgactatgcc
     4741 acaacttgca aattattttg aaatgaaaga tcatacagct atttcacata atgttaaaaa
     4801 aatcacagaa atgatagaaa atgatggttc tttaaaagca aaaatcgaag aacttaaaaa
     4861 caaaattctt gttaaaagtc aaagttaagt gaaaggatgt gaaaaataaa ttctagagtg
     4921 tgaaaaaaag aaattaagca aagtatgata aaatacaaat ttgattattt tgctttgaag
     4981 aatttcacaa tttcaacaag cttattatta caacgaattt aaaattaaaa taaaccaagg
     5041 agaaaaaatg aagttaagta tcaataaaaa tactttagaa tctgcagtga ttttatgtaa
     5101 tgcttatgta gaaaaaaaag actcaagcac tattacttct catctttttt ttcatgctga
     5161 tgaagataaa cttcttatta gagctagtga ttatgaaata ggtatcaact ataagataaa
     5221 aaaaatccgc gtagaatcaa gtggttttgc tactgcaaat gcaaaaagta ttgcagatgt
     5281 tattaaaagc ttaaacaatg aagaagttgt tttagaaacc attgataatt tcttatttat
     5341 aagacaaaaa agcacaaaat acaaacttcc tatgtttaat catgaagatt ttccaaattt
     5401 tccaaataca gaaggaaaaa accaatttga cattgattca agtgacttaa gtcgttctct
     5461 taaaaagata ttaccaagta ttgatacaaa caacccaaaa tactccttaa atggtgcatt
     5521 tttagatata aaaacagata aaattaactt cgtaggaact gatacaaaac gccttgcaat
     5581 ctatacttta gaaaaagcaa ataatcaaga atttagtttt agtatcccta aaaaagctat
     5641 catggaaatg caaaaacttt tctatgaaaa aatagaaatt ttttatgatc aaaatatgct
     5701 tatcgctaaa aatgaaaatt ttgaattctt tacaaaactt atcaatgata aatttccaga
     5761 ttatgaaaaa gttataccaa aaactttcaa acaagaactc agtttttcaa ctgaagattt
     5821 tatagatagt cttaaaaaaa tcagcgttgt aactgaaaaa atgagacttc attttaacaa
     5881 agataaaatc atctttgaag gtataagttt agacaatatg gaagcaaaaa cagaacttga
     5941 aattcaaaca ggagtaagtg aagaatttaa tcttactata aaaatcaaat atttacttga
     6001 tttcttaact tctatagaag aagaaaaatt cactttaagt gtaaatgaac ctaattcagc
     6061 atttatagtc aaatcccaag gactatcaat gattatcatg cctatgattt tgtaataaaa
     6121 caagtaaaag ataaaggaaa aatatgcaag aaaattatgg tgcgagtaat attaaagtct
     6181 taaaaggctt agaagctgtt agaaaacgcc caggtatgta tataggagat acaaacatag
     6241 gcggacttca tcatatgatt tatgaagttg tggataattc tattgatgaa gctatggcag
     6301 gacattgtga tactatagat gtagaaatca ctactgaagg aagctgtata gttagtgata
     6361 atggtcgtgg tattcctgtt gatatgcacc caactgaaaa tatgccaact ttaactgttg
     6421 ttttaactgt cctacatgca gggggaaaat tcgataaaga tacttataaa gtttcaggcg
     6481 gtttgcacgg tgttggggtt tcggttgtaa atgcactttc taaaaaactt gtagctacag
     6541 ttgaaagaaa tggagaaatt tatcgtcaag aattttcaga aggtaaagtt atcagtgaat
     6601 ttggtgtgat aggaaaaagt aaaaaaacag gaacaactat agaattttgg cctgatgatc
     6661 aaatttttga agtgactgaa tttgattatg aaattttggc taaaagattt cgtgaacttg
     6721 catacttaaa tccaaaaatc actataaatt ttaaagataa ccgcgtaggc aaacatgaaa
     6781 gttttcactt tgaaggtgga atttctcagt ttgttacaga cttaaataaa aaagaagctt
     6841 taactaaagc aattttcttt agcgtagatg aagaagatgt gaatgttgaa gtagctttgc
     6901 tttacaatga tacttatagt gaaaatttac tctcttttgt aaataatatc aaaactccag
     6961 atggtggaac acacgaagct ggttttagaa tgggtttaac tcgtgtgata agtaactata
     7021 tagaagcaaa tgcaagtgct agagaaaagg ataataaaat cacgggtgat gatgtgcgtg
     7081 aaggtttgat cgctattgtg agtgtaaagg tgcctgaacc acaatttgaa ggacaaacca
     7141 aaggaaaact tggttcaact tatgtgcgtc ctatagtttc aaaagcaagt tttgaatatt
     7201 tgactaaata ttttgaagaa aatcctatcg aagctaaagc tataatgaac aaagccttaa
     7261 tggcagctag aggaagagaa gcagcgaaaa aagctagaga attaacgcgt aaaaaagaaa
     7321 gtttaagcgt aggaacttta ccagggaaat tagctgattg tcaaagtaaa gatccaagtg
     7381 aaagtgaaat ttatcttgtg gaaggggatt ctgcaggagg ttctgcaaaa caaggtagag
     7441 aaagatcttt ccaagctata ctgcctttgc gtggtaaaat tttaaatgtt gaaaaagcaa
     7501 gattagataa aattttaaaa tctgagcaaa ttcaaaatat gattaccgct tttggctgtg
     7561 gtataggtga agattttgat ctttcaaaac ttagatatca taaaatcatc atcatgacag
     7621 atgcggatgt tgatggatca catatacaaa ccttgctttt aactttcttc ttccgtttta
     7681 tgaatgaact tgtgacaaat ggacatattt atttagcaca accaccttta tatctttata
     7741 aaaaagctaa aaagcaaatt tatttaaaag atgaaaaagc tttgagcgaa tacctgatag
     7801 aaacaggaat agaaggttta aactatgaag gtataggaat gaatgattta aaagattatt
     7861 taaaaatcgt cgcagcttat cgtgcgattt taaaagatct tgaaaagcgt tttaatgtga
     7921 tttctgtgat acgctatatg atagaaaatt caaatttagt taaagcaaat aatgaagaat
     7981 tatttagtgt aatcaaacaa tttttagaaa cacaaggaca caatatctta aatcattata
     8041 tcaatgaaaa tgaaattcga gctttcgttc aaactcaaaa tggcttagaa gaacttgtga
     8101 tcaatgaaga acttttcact catccactat atgaagaagc aagttatatt tttgataaga
     8161 ttaaagatag aggcttggaa tttgataaag atattttaga agttcttgaa gatgttgaaa
     8221 ccaatgctaa aaaaggtgcc actatacaac gctataaagg tttaggggaa atgaatcctg
     8281 agcaactttg ggaaaccaca atggatccaa gcgtaagaag acttttaaaa atcactattg
     8341 aagatgcaca aagtgcaaat gataccttta atctctttat gggtgatgag gttgaaccaa
     8401 gacgcgatta tatccaagcg cacgctaaag atgtaaagca tttggatgtg taaaaattta
     8461 tcattgaaga aatgatttct tcaatgagtt ttgttttgta agagtatagc tagaggaatt
     8521 cttcttcttg tatcgtattt ttctccataa tatttttcaa gataatttaa aattttttct
     8581 tcatcttcag gttctatttc ccaaagtcct tcactatctt gcatccatct tatagctgct
     8641 aaccaagctt ttctacttgc atgcatattg gtaatgagat tggatccatg acaagctaaa
     8701 caatttgctt ccactaaagg tgaatcagga tcgataatca atcctgtatc agggttaatt
     8761 tcaagatttt gagcccaact tgcacttaaa aacaatgcta agatcaatat aatttttttc
     8821 atacttaaac tccataaaca ttaactctat ggcatgcatt attgatatat cctcctggat
     8881 tccactgtgc taaaaccata ggttgactgt taccttgact atcgatagct cttgcccaaa
     8941 tttcataata tccttttgtt ggtattgata tttgagcact ccatttttgc catgctaatc
     9001 tatttaatgg tttttctacc tttgctttag tccatgttac gccataatca ttgcttacat
     9061 aaacttcact aacttcaagt tctccagccc aagctttacc tctaacttca aattttttat
     9121 ttgcttttat ttcagaacca tttttgatat tagtaattac agatcttata ggcattgatt
     9181 ctatgatttt catctcgcct ttatagttaa aatctcctgg ttttaccgga tttacaggaa
     9241 ctttataaga accttccatt ttttcaccat catgaatttt atttcttact gaaattttat
     9301 aaagccattt accgcttgta cttgcagggt aaccaccaca aacaagtcta agtggatagc
     9361 cattgactaa aggaatatct ttgccttcat aagcccaagc tattagagtt tcatcttgta
     9421 aagctttaga aataggaact cctctactaa taggtgaagt ttcttcacca tttaattttg
     9481 tatctatgcc ataatatccg atataaaccg catcattttt gatgccacaa tcttttaaaa
     9541 tatcttttaa acgcactcct gtccatctac cgcaagctac tgcaccataa ccccattgag
     9601 ttccttttgt gctaggtata acttcggatc taccatttcc accgcattca actgttaagg
     9661 cataagtata ggttttaaat ttctttttta aatcttctat ggtgtaagat tttttattga
     9721 taatgctttc tccatcgatt tctaaagtcc aacctttatg aagtctttct tttatcgttt
     9781 ctaggcttgg tggtaagcca ttatttctaa caaagaaatt ttcaggttta gtaaaatcag
     9841 aatcaagagc ataaatttca gtttctgctg ttaatggttt ttcgccatgg tagataagat
     9901 cttttttacc ttctatttta aaatcaggca attcttttgc caaagcctta cttcctaaaa
     9961 aattctcaaa agaaaaattt gacaatacac taatgccaaa taaaccaagt cctatatttt
    10021 ttagaaagtc tctacgattt tctttttgat cgttctgttt c
//
LOCUS       DAPIVO010000063         8692 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.063, whole genome shotgun sequence.
ACCESSION   DAPIVO010000063 DAPIVO010000000
VERSION     DAPIVO010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8692)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8692)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8692
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.063"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            23..1159
                     /gene="pseA"
                     /locus_tag="RJ239_001491"
     CDS             23..1159
                     /gene="pseA"
                     /locus_tag="RJ239_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid biosynthesis protein PseA"
                     /protein_id="HDV7331596.1"
                     /translation="MKFCKKCVMPDTKPDLHFDEEGVCDACRSQEAKNQNINWQEREK
                     EFFELIKKYKKHPVYDCVIGVSGGKDSTFQVVKMLELGLNPLCVCFEPSVPTKIGRKN
                     LDNLNHLGVDLIHIKRDPKVYQKLAREAFIRTGDNEWQNHLGIFTSVPRIAVNFGVPL
                     IIWGESPQIEYGGPASSKNKNILGREWLEEFGGLLGNRASDMLGVNGITEKDLFLYTY
                     PSDEELQRVGVTGLFLGYYFKWDYKKILEISKKYGFLTLDHPVETTYENFENLDCYSN
                     HVHDYLKYCKYGFGRATDNACLDIRLGYISREEGVRLVQKYDGKPPKKAIKKYLEFSG
                     FSEEEFQKIVDSFTNKKIFKRDENGKFIRDYDGSLVRKDECVLK"
     gene            1156..1761
                     /gene="hisH"
                     /locus_tag="RJ239_001492"
     CDS             1156..1761
                     /gene="hisH"
                     /locus_tag="RJ239_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDV7331597.1"
                     /translation="MIALIDYKAGNLNSVAKAFEKIGAINFIAKNPKDLQKADKLLLP
                     GVGFFKEAMKNLKELGFIEALKEQVLVQKKPILGICLGMQLFLERGYEGGVCEGLGFI
                     EGEVVKFEEDLNLKIPHMGWNELEILKQVPLYQGIDNKSDFYFVHSFYVKCKDEFVSA
                     KAQYGHKFVASLQKDHIFATQFHPEKSQNLGLKLLENFARL"
     gene            1762..2508
                     /gene="hisF"
                     /locus_tag="RJ239_001493"
     CDS             1762..2508
                     /gene="hisF"
                     /locus_tag="RJ239_001493"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDV7331598.1"
                     /translation="MLKTRIIPCVLLKNSQLVKSIEFKDFRTIGHLTSTMRIYNARNV
                     DELIILDIDASKSGEIDFESIEDLAKECFMPLTIGGGIKTLEDIQKILNLGADKISIN
                     SKALEDMDFISKAGNRFGSQCIVCSIDVKRKGDQFCVYDRGNLLEKSPLELALEYEKK
                     GAGELLLTSVDFEGKAKGYDLELLKIFQNKLKIPLIINGGLSKPSDGVEALNLGADAL
                     AGAYIFHFSKYTPKDVKEELARQGFAVRLL"
     gene            complement(2473..2946)
                     /gene="pseH"
                     /locus_tag="RJ239_001494"
     CDS             complement(2473..2946)
                     /gene="pseH"
                     /locus_tag="RJ239_001494"
                     /EC_number="2.3.1.202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase"
                     /protein_id="HDV7331599.1"
                     /translation="MIKLKNFAELNSQEIKLIFKWRNHPDISQFMKTKHIDFEEHLRF
                     IRNLHQDSNKKYFLVFQDEQIIGVIDFVNITTKSCEFGLYAIPDLKGVGQVLMNEIKK
                     YAFEILKVDTLKAYVFKDNHKALKLYQQNHFTIYDEDKDFYYVCLKQSHCKALPS"
     gene            complement(2943..3767)
                     /gene="pseG"
                     /locus_tag="RJ239_001495"
     CDS             complement(2943..3767)
                     /gene="pseG"
                     /locus_tag="RJ239_001495"
                     /EC_number="3.6.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,4-diacetamido-2,4,
                     6-trideoxy-beta-L-altropyranose hydrolase"
                     /protein_id="HDV7331600.1"
                     /translation="MKVLFRSDSSSQIGFGHIKRDLVLAKQYSDVSFACLPLEGSLID
                     EIPYPVYELSSESIYELINLIKEEKFELLIIDHYGISVDDEKLIKLETGVKILSFDDE
                     IKPHHCDILLNVNAYAKASDYEGLVPFKCEVRCGFSYALIREEFYQEAKENREKKYDF
                     FICMGGTDIKNLSLQIASELPKTKIISIATSSSNPNLKKLQKFAKLHNNIRLFIDHEN
                     IAKLMNESNKLIISASSLVNEALLLKANFKAICYVKNQESTATWLAKKGYEVEYKY"
     gene            complement(3751..4449)
                     /gene="pseF"
                     /locus_tag="RJ239_001496"
     CDS             complement(3751..4449)
                     /gene="pseF"
                     /locus_tag="RJ239_001496"
                     /EC_number="2.7.7.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid cytidylyltransferase"
                     /protein_id="HDV7331601.1"
                     /translation="MKNLCIIPARGGSKRIPRKNIIDFLGKPLISYSIENALNSGIFD
                     EVVLSSDDEEIIEVALKYGAKAPFVRDKNLSDDYASSTAVVQNAIEILQSQNQIYDHV
                     CCLYATAPLLNKDILKQAYEKFIQNQSKFLFAATEFEYPIQRAFYLNENNQVYMFDEK
                     HYKSRSQDLTKAYHDAGAFYFGTSKAWLEEDFIFKPHSSVFVLPRNLVCDIDTIQDLE
                     FAKILYKVNHESAF"
     gene            4528..5742
                     /locus_tag="RJ239_001497"
     CDS             4528..5742
                     /locus_tag="RJ239_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HDV7331602.1"
                     /translation="MLINQTFEIDSCDDVELGIKRTSKLEYRISYDDEKDIKAIVFIV
                     GGFGANANISFLDFDREYIAKNFDVVVVHVFYHCFCARQSIDQKYNPKLIPNQDDLER
                     VNGILKNINLGHLSVNKDNFEQIIPLIEQKVNKMKQAGLVDESQKIELSCDFIPPNGD
                     YQNYGIMAAIDHINALKDLVKRFPKFADLPKIYGGGSYGGYLSLLIAKIAPWYVDGVI
                     DNSGVCLPFLACILGREMNQGEFYFEGSGYRLYCFVYKYWNRNMNSSYYFGDENYLIR
                     AVLNSNHLQIQSNLNKNTIFVSYHSIQDMGAPVQNKIELYKCYQELGYDATLHLIKDE
                     NDIDGRFVKSLEHGLRMTDRALFRKELPLMLEKLQGRKSFMQENSISYPCGNKVFVFK
                     DLEDKFELEMIN"
     gene            5764..6834
                     /locus_tag="RJ239_001498"
     CDS             5764..6834
                     /locus_tag="RJ239_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDV7331603.1"
                     /translation="MTAYLHIGTTNTGNQEKQGFLMQNEEKLLQKAYIYPKSLRVANR
                     HWALVDMVLELVQKEDILKKESVLSHITNERLLRAIENFKSESALHKDKKFIFSAEGI
                     VWDFSTKKHVEILEKIMRELGFTQIYIIVYFRDTLGYLNSHCSQDHKNNMGYYSADFA
                     PQDHPRKYIFDYEWICKTHAEVFGEENLIVRLLREDYVGGTLLKDFVYHLGLEWDESF
                     VLKQTKNESFNLLGMELMSRLNQKDLKQDNLNSLLFMARRKFEGSKEKRLKFAVQKDI
                     AKAYVDYFASSLEWVKNKYFPHKNSLFTPVNWEEYEQNYTLTHMLSKDWDDVADFIAQ
                     IIVSKNEIISSLKEQLELARKD"
     gene            complement(6831..7058)
                     /locus_tag="RJ239_001499"
     CDS             complement(6831..7058)
                     /locus_tag="RJ239_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDV7331604.1"
                     /translation="MQEIKQFFINIERTDINESMENLVSEDFIDSIDIMALVAEIEKF
                     YKKPLKAEFITPENFESFENIKKMLETAMKD"
     gene            complement(7098..8606)
                     /locus_tag="RJ239_001500"
     CDS             complement(7098..8606)
                     /locus_tag="RJ239_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HDV7331605.1"
                     /translation="MTTHIYDFLEKSLIKFSEKTAFVEPFVKERKEITYKDFDLFSKK
                     LASEILKTLGNDNPTQAPVLIILPKGIDCLISFFGVALSGNFYTLLDEKSPKERVEKV
                     IEVLKPKLFITSKDLNFNLDLPTLYTQDFESFNIDESLIKHAKEKHIDTNLLYVFFTS
                     GSTGIPKGVSIAHKSVIDYTFWVCETFKFDENEILANQAPFYFDNSILDIFSSVKSGA
                     TLHLLPNHLFAFPNKILECLEKEKVSTIFWVPSVLIYFANTEALNNFSLNALKKMLFC
                     GEIMPNKQLNIWRKHLPNALFANLYGPTEITDVCSFYIINRTFKDEELLPIGKACKNT
                     ELLVFDENMNFISPKQIGVKGELFVRGTSLSLGYYNDKEKTKQAFIQNPLHDNYLDLL
                     YKTGDIVSYNEFGELLCYGRADNQIKYMGHRIELGEIESVINSHVNIKNSACIFKEDI
                     ICFYESEEEINFKDFLKDKLPSYMIPKNFIKLDKFKLNQNGKIDRKVLKELV"
BASE COUNT         3018 a         1134 c         1466 g         3074 t
ORIGIN      
        1 taagactaat taaaggaaat ttatgaaatt ttgtaaaaaa tgtgtgatgc cagatactaa
       61 gcctgattta cattttgatg aagaaggtgt ttgtgatgct tgtcgttctc aagaagctaa
      121 aaatcaaaat attaattggc aagaaagaga aaaagaattt tttgagctta taaaaaaata
      181 caaaaaacat cctgtttatg attgtgttat cggagtaagt ggcggaaaag attctacttt
      241 tcaagtggtt aaaatgctcg aacttggact taatcctttg tgtgtgtgtt ttgagcctag
      301 cgtacctacg aaaatagggc gcaaaaattt agacaattta aatcatcttg gcgtggattt
      361 gatccatatc aagcgtgatc caaaagttta tcaaaaactt gcccgtgaag cttttataag
      421 aacaggggat aatgagtggc aaaaccattt gggaattttt acttctgttc cacgcatagc
      481 ggtaaatttt ggagtgcctt tgatcatctg gggagaaagt ccgcagatag agtatggcgg
      541 tcctgcgagt agtaaaaata aaaatatttt aggcagagag tggcttgaag aatttggcgg
      601 gcttttagga aatcgtgctt ctgatatgct tggggtaaat ggtatcactg aaaaagattt
      661 gtttttatat acttatccaa gtgatgaaga acttcaaaga gtaggggtta cggggctatt
      721 tttagggtat tattttaaat gggattataa aaaaattctt gaaatttcta aaaaatatgg
      781 ttttttaact ctagatcatc ctgttgagac tacttatgaa aattttgaaa atttagattg
      841 ttattctaat catgtgcatg attatttaaa atactgcaaa tacggctttg gtagagcaac
      901 agataatgct tgtttggata ttcgtttagg ttatatcagc cgtgaagaag gggtgcgttt
      961 ggtacaaaaa tacgatggca agccccctaa aaaggctatt aaaaaatacc ttgaattcag
     1021 tggttttagc gaggaagaat ttcaaaaaat agtagattct tttaccaata aaaaaatttt
     1081 taaacgtgat gaaaatggta aatttataag agattatgat ggttctttgg taagaaaaga
     1141 cgagtgtgtt ttaaaatgat agcgctcatt gattacaagg cgggaaattt aaactctgtt
     1201 gctaaggctt ttgaaaaaat aggagctata aattttatag ctaaaaatcc aaaagatttg
     1261 caaaaagcag ataaattgct tttacctgga gtgggatttt ttaaagaagc gatgaaaaat
     1321 ttaaaagaac ttggttttat agaagcttta aaagagcaag ttttagtaca aaaaaaacct
     1381 attttaggca tttgtttagg aatgcagctt tttttagaaa ggggctatga aggtggagtt
     1441 tgcgaaggac ttggttttat agaaggtgaa gtagtcaaat ttgaagagga tttaaattta
     1501 aaaatcccac atatgggttg gaatgagctt gaaattttaa aacaagttcc tttgtatcaa
     1561 ggcatagata ataagagtga tttttatttt gtgcattctt tttatgtgaa atgcaaagat
     1621 gagtttgtaa gtgctaaagc acaatacgga cataaatttg ttgcatcttt acaaaaagat
     1681 catatttttg ctacacaatt tcaccctgaa aaaagtcaaa atttaggttt aaaactttta
     1741 gaaaattttg caaggcttta aatgttaaaa actagaatta tcccttgtgt gttattaaaa
     1801 aattctcaac ttgttaaaag tatagaattt aaagattttc gcactatagg gcatttaact
     1861 tcaacaatga gaatttataa tgcacgcaat gttgatgagc ttattatctt agatatagat
     1921 gcttcaaaaa gtggagaaat agattttgaa agtatagaag atcttgctaa agaatgtttt
     1981 atgcctttaa ctataggtgg cgggataaaa acccttgaag atatacaaaa gattttaaat
     2041 ttaggtgcgg ataaaatttc tatcaattct aaggccttag aagatatgga ttttataagt
     2101 aaagcgggta atcgttttgg ttctcaatgt atagtttgtt ctatagatgt taaaagaaaa
     2161 ggagatcaat tttgtgttta tgatagggga aatttacttg aaaaaagtcc tttagaactt
     2221 gctttagaat atgaaaaaaa aggagctgga gagcttcttt taacttctgt ggattttgag
     2281 ggaaaagcaa agggttatga tttagaactt ttaaagattt ttcaaaataa acttaaaatt
     2341 cctcttatta tcaatggagg acttagcaag ccaagtgatg gagttgaggc tttaaattta
     2401 ggcgccgatg ctttagcggg tgcttatatt tttcattttt ctaaatatac ccctaaagat
     2461 gtaaaagaag aattagctag gcaaggcttt gcagtgagat tgctttaagc aaacatagta
     2521 gaaatcttta tcttcatcat aaatagtaaa atgattttgt tgatataatt ttaaggcttt
     2581 gtgattgtct ttaaaaacat aagctttaag agtatctact tttaaaattt caaaggcgta
     2641 ttttttgatt tcattcatta aaacttgtcc tacgcctttt aaatcaggta ttgcataaag
     2701 tccaaattcg caagatttag ttgtgatatt gacaaaatca attacaccga taatctgttc
     2761 atcttgaaaa actaaaaaat attttttatt agaatcttga tgtaagtttc ttataaatct
     2821 taaatgttct tcaaaatcaa tatgttttgt tttcataaat tgactgatat cggggtgatt
     2881 gcgccattta aaaatcagct ttatttcttg agaattaagt tctgcgaaat ttttaagttt
     2941 tatcaatact tatactccac ttcataccct tttttagcaa gccaagttgc tgtagattct
     3001 tgatttttaa cataacaaat agctttgaaa tttgccttta aaagcaaggc ttcattgact
     3061 aaagaacttg cactaatgat gagtttattg ctttcattca tcaattttgc aatattttca
     3121 tgatcgataa ataatctaat attgttatgt aattttgcaa atttttgcaa ttttttaaga
     3181 ttaggattag aagagctggt tgcaatgctg atgatttttg ttttaggtaa ttcgctagca
     3241 atttgtaaag aaaggttttt tatatcagtt ccacccatgc aaatgaaaaa atcatatttt
     3301 ttttctctat tttctttggc ctcttgataa aattcttccc tgattaaagc ataagaaaaa
     3361 ccacatctta cttcgcattt aaaaggcact aaaccttcat aatcacttgc ttttgcatag
     3421 gcattgacat tgagtaaaat atcacaatga tgaggcttta tttcatcatc aaagcttaga
     3481 attttcaccc ctgtttcaag cttgatcagt ttttcatcat ctacgctgat gccatagtga
     3541 tcaatgataa gaagttcaaa tttttcttct ttgatgagat tgataagctc gtagatactt
     3601 tcgctactaa gctcataaac aggataagga atttcatcga tcaaggagcc ttctaaaggc
     3661 aagcaagcaa aacttacatc gctatattgt ttagctaaga ctagatcgcg tttaatgtgt
     3721 ccaaagccta tttgactgga gctatcgctt ctaaaaagca ctttcatgat ttaccttata
     3781 aagtattttt gcaaattcca aatcttgtat ggtgtctata tcgcaaacta aatttcttgg
     3841 caatacaaac acgctagaat gaggtttaaa tataaaatct tcctcaagcc aagctttgct
     3901 tgtaccaaaa taaaaagctc ctgcatcatg ataagctttt gttagatctt gtgaacgact
     3961 tttataatgt ttttcatcaa acatataaac ttgattgttt tcatttagat aaaatgccct
     4021 ttgtatagga tactcaaact cagtagcagc aaataaaaac ttgctttgat tttgtataaa
     4081 tttttcatag gcttgtttta aaatgtcttt atttaacaaa ggagcagtag cataaaggca
     4141 gcagacatga tcataaattt gattttggct ttgtaaaatt tctatggcat tttgcactac
     4201 agcagtgctt gaagcataat catcgcttaa atttttatca cgcacaaaag gagcttttgc
     4261 accgtatttt aaggctactt ctatgatttc ttcatcatcg cttgaaagca ccacttcatc
     4321 aaaaatacct gaatttaaag cattttctat gctataagag attaaaggtt tacctagaaa
     4381 atcaatgata ttttttctag gaattctttt tgatccacca cgagcaggga ttatgcaaag
     4441 atttttcata gttaagcctt gtttttgtgt tttattttac taaaatttaa gtataattgt
     4501 ctttaaaata caataaaagg cttaaaattg cttataaacc aaacctttga aattgattct
     4561 tgtgatgatg tagaactagg tattaaaaga accagtaagc ttgaatatcg cataagttat
     4621 gatgatgaaa aagatatcaa agccatagtt tttatagtgg gtggttttgg agctaatgca
     4681 aatatttctt ttttagattt tgatagggaa tatattgcta aaaattttga tgttgtagtg
     4741 gtacatgttt tttatcattg tttttgtgca agacaaagta ttgatcaaaa gtataatcca
     4801 aagcttattc ccaatcaaga tgatttagag cgtgtaaatg gcattttaaa aaatattaat
     4861 ttaggacatt tatcggttaa taaagataat tttgaacaaa ttattcctct tatagagcaa
     4921 aaagttaata aaatgaaaca agcaggtttg gttgatgaaa gccaaaaaat agaactttct
     4981 tgtgatttta tcccacccaa tggagattat caaaactatg gcattatggc agctattgat
     5041 catatcaatg ctttaaaaga tttagttaaa cgctttccaa aatttgcaga tttaccaaaa
     5101 atttatgggg gggggtctta tggaggatac ctatctttac tcatagcaaa aatagctcct
     5161 tggtatgtgg atggtgtgat tgataattca ggtgtttgct tgccattttt ggcgtgcatt
     5221 ttaggaagag aaatgaatca aggggaattt tatttcgaag gaagtggtta tagactttat
     5281 tgttttgtat ataaatactg gaatagaaat atgaattctt cttattattt tggtgatgaa
     5341 aattatttaa tcagagcagt tttaaattca aaccatcttc aaattcaatc aaatttaaat
     5401 aaaaatacca tttttgtaag ctatcatagt atacaagata tgggtgcgcc agtgcaaaat
     5461 aaaatagaac tttataagtg ttatcaggaa ttaggatatg atgcaacttt acatttaata
     5521 aaggatgaaa atgatataga tggtagattt gtaaaaagtt tagagcatgg acttagaatg
     5581 actgataggg ctttatttag aaaagaactt cctttaatgc ttgaaaaact acaaggaaga
     5641 aaatctttta tgcaagaaaa ttctatctct tatccttgtg ggaataaagt atttgtgttt
     5701 aaggatttag aagataaatt tgagttagag atgataaatt aaaataaaga taaaggatat
     5761 aaaatgacag catatttaca tataggaact actaatacag gaaatcaaga aaaacaaggc
     5821 ttcttgatgc aaaacgaaga aaagcttttg caaaaagctt atatttaccc aaaaagtctt
     5881 agagtggcaa ataggcattg ggctttggtg gatatggttt tagaattggt tcaaaaagaa
     5941 gatattttaa aaaaagagag tgttttaagt catatcacaa atgaaagact tcttagagct
     6001 atagaaaatt ttaaaagtga aagtgcttta cataaagata aaaaatttat tttttcagct
     6061 gagggtatag tttgggattt ttctaccaaa aaacatgtag aaattttaga aaagattatg
     6121 agagagttag gttttactca aatttatatt attgtgtatt ttagagatac tttgggttat
     6181 ttaaactcac attgttctca agaccataaa aacaatatgg ggtattattc tgctgatttt
     6241 gctccgcaag atcatcctag aaaatatatt tttgactatg aatggatttg caaaactcat
     6301 gctgaggtat ttggagaaga aaatttgata gtaagacttc taagggagga ttatgtagga
     6361 gggactttac ttaaggattt tgtttatcat ttaggacttg aatgggatga gagttttgtt
     6421 ttaaaacaaa ccaaaaatga aagttttaat cttttaggaa tggagcttat gtcaagatta
     6481 aatcaaaaag atttaaagca ggataatctt aattctttgc tttttatggc aagaagaaaa
     6541 tttgaaggca gcaaagaaaa aagattaaaa tttgcagtgc aaaaagatat tgctaaagct
     6601 tatgtggatt attttgcttc ttcacttgaa tgggtaaaaa acaaatattt cccgcataaa
     6661 aattctcttt ttactcctgt gaattgggaa gaatatgaac aaaattatac tttaacccat
     6721 atgctaagta aagattggga tgatgtggcg gattttatag cacaaattat tgtttctaaa
     6781 aatgaaatca tcagttcttt aaaagaacag cttgaacttg caaggaaaga ttagtctttc
     6841 attgcagttt caagcatttt tttgatattt tcaaagcttt caaaattttc aggtgtgata
     6901 aattctgctt ttaagggttt tttataaaat ttttctattt cggcaaccaa agccatgata
     6961 tcgatactat cgataaaatc ttcacttact agattttcca tactctcatt gatatctgtt
     7021 ctttctatat tgataaaaaa ttgtttgatt tcttgcattt tttctccttt agttttttga
     7081 aattataaaa tatttattta aacaagttct tttaaaacct ttctatcaat tttaccattt
     7141 tgattaagct taaatttgtc gagtttaata aaattttttg ggatcatata agaaggtaat
     7201 ttatctttca aaaaatcttt aaaattaatt tcttcttcac tttcataaaa acaaataata
     7261 tcttctttaa aaatacaagc actgttttta atattcacat gagaatttat cacgctttct
     7321 atttctccaa gttctattct atgtcccata tattttatct gattatctgc tcttccgtag
     7381 cataaaagct ctccaaattc attataagaa acgatatctc ctgttttata gagtaaatct
     7441 aaataattat catgtaaagg attttgaata aaagcttgtt tggttttttc tttgtcatta
     7501 taatacccta aagacaaaga agttccacgc acgaaaagct cccctttaac acctatttgt
     7561 ttaggactta tgaaattcat attttcatca aaaactaaaa gttctgtgtt tttgcacgct
     7621 tttcctatcg gtaaaagttc ttcatcttta aaagtgcgat tgatgatata aaaagaacat
     7681 acatcagtga tttctgttgg gccataaagg ttggcaaata aggcattggg taagtgttta
     7741 cgccaaatat tgagctgttt attgggcatg atttcaccac aaaaaagcat cttttttaag
     7801 gcgtttaaac taaaattatt caaagcttca gtatttgcaa aataaatcag caccgaaggt
     7861 acccaaaata tagtgcttac tttttctttt tcaaggcatt ctaaaatttt atttggaaag
     7921 gcaaaaagat gattaggtaa aaggtgtaaa gtcgctcctg attttacact tgaaaaaata
     7981 tctaaaatgc tattgtcaaa ataaaatggc gcttgattgg ctaaaatttc attctcatca
     8041 aatttaaaag tctcacacac ccaaaaagta taatcaatca cactcttatg agctatgctt
     8101 actcctttag gaatgcctgt gctcccactt gtaaagaaaa catagagtaa attagtatct
     8161 atatgttttt ctttggcatg ctttattaaa ctctcatcta tattaaaact ttcaaagtct
     8221 tgtgtataaa gcgtaggtaa atctaagtta aaatttaagt cctttgaagt gataaaaagt
     8281 ttaggcttta aaacttctat gactttttct actctttctt taggactttt ttcatctaaa
     8341 agtgtataaa aatttccact gagtgccact ccaaaaaatg aaatcaaaca atcaatccct
     8401 ttaggcaaga tgattaaaac aggagcttga gtaggattat catttcctaa agtttttaaa
     8461 atttcactgg ctagtttttt agaaaagaga tcaaagtctt tgtaagtgat ttcctttctt
     8521 tctttgacaa agggttctac aaaagcagtt ttttcgctaa atttgattaa acttttttct
     8581 aaaaaatcat agatatgagt tgtcatgatt taccttttta attttttgta atataatatc
     8641 gataaattaa taaaaaaggc ctttatatgc tcataaacca aagctttgaa at
//
LOCUS       DAPIVO010000064         8634 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.064, whole genome shotgun sequence.
ACCESSION   DAPIVO010000064 DAPIVO010000000
VERSION     DAPIVO010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8634)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8634)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8634
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.064"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(138..590)
                     /locus_tag="RJ239_001501"
     CDS             complement(138..590)
                     /locus_tag="RJ239_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HDV7331606.1"
                     /translation="MFKVYYKMPLCYLSLHSDGKFLTRVDFCDNKRSEKNCSLLDLAK
                     YELDLYFTHKLRKFSIPVLIQGTDFESKVYKALMEIPYGKIATYKDIAEKINHPKAFR
                     AVGNANSKNQIPIFIPCHRVIASNGIGGYNGGLEIKRFLLENEGVNLK"
     gene            645..3191
                     /locus_tag="RJ239_001502"
     CDS             645..3191
                     /locus_tag="RJ239_001502"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HDV7331607.1"
                     /translation="MSFMQEYNKLVEERAALGIPPLPLNANQTRELCKLLENENNEEL
                     ANLLENRVNPGVDDAALVKCEFLDSILKGKISAPNIDKKRALRMLGTMLGGYNVKVLI
                     DALKDENIAKDAAEVLKNIIFVHDNFHTIAELSKNNPHAKEVLQSWANADWFNKKEKL
                     PQVIKCIVFKVAGETNTDDLSPAGDAFTRSDIPLHANAMLKVRQTGSLEKIKELKKSG
                     REVVYVGDVVGTGSSRKSAINSIQWHLGKEIEGVPNKHSGGIIMGSTIAPIFFNTAQD
                     SGALPIICDVTNLEMGDEFEIHPYEGKIIKNGSTIAEFTLSPNTLLDEVRAGGRIPLI
                     IGRGLCTKAREFLGMESENIFTKPEQPKSSSGGYTLAQKMLGRACGVEGVRPGMYIEP
                     ITLTVGSQDTTGPMTRDEIKELASLGFNADFVMQSFCHTAAYPKVSDSNLHKTLPNFM
                     TSRGGVSLKPGDGVIHSWLNRFVLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAVTG
                     SMPLNVPESVLVRFSGELQAGVTLRDLVNAIPYYAIKQGQLTVEKKNKKNIFAGKILE
                     IEGLPNLKVEQAFELSDASAERSAAACSVDLSIESVSEYIKSNISLIEAMIEVGYENK
                     ATLARRAEKMREWLKNPTLLRADKDAKYAYIIDINLNNIKEPILACPNDPDDVATLSE
                     ILADDKRPKNIDEVFVGSCMTNIGHYRALGEILKDKGILKTRLWVVPPTKMDKAQLIN
                     EGYYSIFGAAGARIEVPGCSLCMGNQARVNDGAVVFSTSTRNFDNRMGMGAKVYLGSA
                     ELAAVCAILGKIPSKEEYLQIVSEKLSNEHKANIYRYLNFNEIENFKLEN"
     gene            3241..4479
                     /locus_tag="RJ239_001503"
     CDS             3241..4479
                     /locus_tag="RJ239_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDV7331608.1"
                     /translation="MKLLFTSFCCFASLMASDAINCDNIKNNKTLLNESSNLDYLNIA
                     SSCKESLKNQDFTKKLYAISNEIRGSNSSCNGVAYLPKLQQFDFLLLKIAIDPIAYQK
                     TLDTPENLEKKYDILKSYFRYWAYQSIGNFRLYKAFWQEYNNAIEPLEKYFESNFNFD
                     KGSNIYYTSNALNEFLNWAVGETKIYKDISPLAKIMSNKNYSVSYIQDFIFSNNPSQD
                     DLTIALQAALLNQREKEILELLIRFGARIDEGYESAIFYALESYENTNFLIQNGANVN
                     QANAFGKTPLFYAIEFNRLDIIKLLLDNGANVNQKYINNNEKLALSANIGSNTPYFIT
                     FCALEHTSKNVLMHAAAYGNVEILKLLISKGANFNAVDDLGFNALDFALSAGKKENAD
                     YLKSLGLKANENLFYGGSLE"
     gene            4476..5225
                     /locus_tag="RJ239_001504"
     CDS             4476..5225
                     /locus_tag="RJ239_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HDV7331609.1"
                     /translation="MKTAFITGASSGFGRACVEAFIQEGYKAIALARRKERLEELKNA
                     YKDKIYTLCIDVRNQKEIFEAIENLPKEFQEIDVLFNNAGLALGVDEFDKLNLEDINT
                     MVDTNIKGFLYVAKAIIPILRKQKNAYIFNLGSVAGRNPYFGGNVYCGTKAFVGQFSL
                     ALRNDLRGSNIKVTNIAPGLCKTEFSEVRFKGDIQKADAVYENTQFISANDIAKVVMS
                     IINLPSHINVNEIELMPVTQTWNGFYIERDE"
     gene            5222..6955
                     /locus_tag="RJ239_001505"
     CDS             5222..6955
                     /locus_tag="RJ239_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HDV7331610.1"
                     /translation="MNKFLVSLFLPLVAFANSSEAAANANLFGAFTLIPPLVAIALAF
                     ITKDVILSLFTGVLSGTFLLSLSTNIFKAQHLTFVNYYNTTVESFSKIISYILGSTSD
                     PVNAGIILQILCIGGLVALITKMGGAKAVALKFAKRAKSAVSAQVNTWFLGLLIFFDD
                     YANLLIVGPIMRPLADKFKISREKFAFIIDSTAAPVAGIAVISTWIGLEVSLIKTAYE
                     HIGISNISAFGIFVETIPYRFYNIFMLFFVVMTAIMGREFGSMYKAEVRARTTGQIAP
                     LPKSGTLDTTELEDQFLAPKEGIKIRAFDAIVPIFTLIILAILGFYFNGLSTLEGEEL
                     AKASTNPLSFETFRAAFGNADSSVVLFQAALFAAIVAIFIGVRRKIFNLKEAVETWIY
                     GWKTMIFTIVLLLFAWSLSSIVKDLGTSLFITSLLADKLPEFILPATIFAFASAISFA
                     IGTSYGTMGILMPLAVPLAHEIAKINGMDANAMHHYMVINISCVLTGAIFGNHCSPIS
                     DNVILSSMSAKCDHMEHVRTQIPYALFICGISLIAGYIPVSLGLSVWFVLPLNFILIA
                     LLLRLIGKKVP"
     gene            6952..8025
                     /gene="trmA"
                     /locus_tag="RJ239_001506"
     CDS             6952..8025
                     /gene="trmA"
                     /locus_tag="RJ239_001506"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HDV7331611.1"
                     /translation="MSLENFGNFLTLDEKHSFIKKYFKEFYTKDFKLFASKDKHYRTR
                     AELSFYHENDTLFYAMFDPKSKKKYIIEYLDFADEKICAFMPRLLEYLRQDNKLKEKL
                     FGVEFLTTKQELSITLLYHKNIEDIKSNLENLSNILHINLIARSKGKKLIFKTENLRQ
                     TLNIQDRKIFYEFNNDCFIQPNTAINEKMITWVCEILNTQKRMDLLELYCGYGNFTLA
                     LAPFFFKILATEISKSNINFALKNCELNNTTNIHFARLSSEELSLAIKKEREFFRLKD
                     IRLDDFNFSHVLVDPPRAGLDKSVIDLIKKYENIIYISCNPITLKENLKELSLTHRVE
                     EFALFDQFVNTPHLECGVFLSKV"
     gene            complement(8012..8428)
                     /locus_tag="RJ239_001507"
     CDS             complement(8012..8428)
                     /locus_tag="RJ239_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002956941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein CopD"
                     /protein_id="HDV7331612.1"
                     /translation="MEEFYPYTLTIHLLCAILFIGYLFVDVFVLGVVKKKNPNFDKSL
                     FSATGVKIMPFVVLLLFLSGGALAGFHFKPLNLLFAVKIILAFGILSLVVFSLFCHFI
                     LKKKNPLGVFIHPFVFVLCIAIVILAKLMNYFFIPC"
     gene            8547..>8634
                     /locus_tag="RJ239_001508"
     CDS             8547..>8634
                     /locus_tag="RJ239_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HDV7331613.1"
                     /translation="MNEKETISYIINTSKNIVIFALSPDKTKA"
BASE COUNT         3086 a         1310 c         1430 g         2808 t
ORIGIN      
        1 attctttatt ttgcgatttt tcctataatc agctttcaga tttaagaaaa ttaaaaaatt
       61 ttaaatattg tttaattctt gaaaattatg atatttttga gcaagaattt gaaaacaaag
      121 aaaatcaaac cccaagctta ttttaaattc actccttcat tttcaagcaa aaatcttttt
      181 atttcaagcc ctccattata tcctcctatg ccattgcttg caataactct atgacaaggt
      241 ataaaaatag gaatttgatt tttagaattt gcatttccaa cagctctaaa agcttttgga
      301 tgattaattt tttctgctat atctttataa gtagctattt tgccataagg aatttccatt
      361 aaagccttgt aaacctttga ttcaaaatcc gtaccttgta tcaaaacagg aatgctaaat
      421 tttctaagct tatgagtaaa atataaatca agttcatatt ttgctaagtc aagcaaacta
      481 caattttttt ctgatctttt attatcacaa aaatcgactc tagttaaaaa ttttccatca
      541 ctatgtaaag ataggtaaca taaaggcatt ttataataaa ctttaaacat tttttatcct
      601 tcaaagagct acaattataa taaaaaatat ttaaggagta gaaaatgtct tttatgcaag
      661 aatacaataa acttgttgaa gaaagagccg ctttgggtat accacccctt cctttaaatg
      721 caaatcaaac tagagaactt tgtaaattac ttgaaaatga aaataatgaa gagcttgcaa
      781 atcttttaga aaatagagta aatcctggtg ttgatgatgc agctttagta aaatgtgaat
      841 ttttagattc catacttaaa ggcaaaatca gtgctccaaa tatagacaaa aaaagagcct
      901 taagaatgct tggaactatg ctaggcggat ataatgttaa agttttaatc gatgccttaa
      961 aagatgaaaa catagccaaa gatgctgcag aagtgttgaa aaatattatt tttgtacatg
     1021 ataatttcca taccatagct gaacttagca aaaacaatcc acacgctaag gaagttttac
     1081 aaagctgggc aaatgcggac tggtttaata aaaaagaaaa actaccacaa gtgattaaat
     1141 gtatagtttt taaagtagca ggggaaacaa ataccgatga tctaagccct gcaggagatg
     1201 cttttacaag aagcgatatt cctttacatg caaatgccat gctaaaggta agacaaacag
     1261 gatccttaga aaaaatcaaa gagcttaaaa aaagcggtcg cgaagtggtt tatgtaggtg
     1321 atgttgtagg aacaggttca agtagaaaat cggcaataaa ttccatacaa tggcacttag
     1381 gaaaagaaat agaaggtgtg ccaaacaagc acagcggtgg tataataatg ggttcaacta
     1441 tagcaccgat tttctttaac actgctcaag atagcggggc tttacctatc atctgtgatg
     1501 taacaaactt agaaatgggc gatgagtttg aaattcatcc ttatgaggga aaaatcataa
     1561 aaaatggctc tacaatcgca gaatttacac tcagtccaaa cactctctta gatgaagtta
     1621 gagcaggagg aagaatccca cttatcatag gtcgcgggct ttgtactaag gctagagaat
     1681 ttttaggaat ggaaagtgaa aatatcttta ccaaacctga acaacctaaa tcttcaagcg
     1741 gtggttatac cttggctcaa aaaatgctag gtcgtgcctg tggagttgaa ggtgtgcgtc
     1801 caggtatgta tatagaacct ataactttaa ctgtaggctc tcaagatacc acaggtccta
     1861 tgactagaga tgaaattaaa gaacttgcaa gcctaggttt taatgcagac tttgttatgc
     1921 aaagcttttg ccatacagct gcgtatccaa aagtaagcga ttcaaattta cataaaacct
     1981 tgcccaattt catgacaagt cgtggtgggg taagtttaaa accaggtgat ggagttatcc
     2041 actcttggct taatcgtttt gtattgccag ataccgtagg aacgggcggg gattctcaca
     2101 cacgctttcc tataggaatt tctttccctg caggaagtgg acttgtagct tttgctgcgg
     2161 ttactggttc tatgccttta aatgtacctg aaagtgtttt agtgcgtttt agtggagaat
     2221 tgcaagccgg agttacctta agagatttgg ttaatgctat accttattat gcaatcaaac
     2281 aaggacaact taccgttgaa aagaaaaata agaaaaatat ttttgcagga aaaattttag
     2341 aaatagaagg cttgccaaac ttaaaagtcg aacaagcttt tgaacttagt gatgcaagcg
     2401 ctgaaagatc tgcagctgct tgcagtgtgg atttaagcat agaaagtgta agcgaatata
     2461 tcaaatccaa tatctcttta attgaagcta tgatagaagt aggatatgag aataaagcta
     2521 cccttgccag aagggctgaa aaaatgagag aatggcttaa aaaccctact cttttaagag
     2581 cagacaaaga tgcaaaatat gcgtacatta tcgatattaa tcttaacaat atcaaggagc
     2641 caattctagc ttgtccaaat gaccctgatg atgtggcaac cttaagcgaa attttagccg
     2701 atgacaagcg tccaaaaaat atagatgaag tttttgtagg ttcttgtatg acaaacatag
     2761 gacattatag agctttggga gaaattttaa aagataaagg catacttaaa accagacttt
     2821 gggtagtgcc tccaacaaaa atggataaag cacaacttat caatgaaggt tattacagca
     2881 tctttggcgc agcaggtgct agaatagaag ttcctggttg ttctttgtgt atgggaaatc
     2941 aagcaagagt aaatgatggt gctgttgtct tctcaacctc tacaagaaac tttgacaatc
     3001 gtatgggtat gggtgctaaa gtatatctag gaagtgctga acttgcagca gtttgtgcga
     3061 ttttgggtaa aattccaagc aaggaagaat acttacaaat tgtcagcgaa aaactaagta
     3121 atgagcataa ggcaaatatc tatagatatt taaattttaa tgagattgaa aatttcaaac
     3181 ttgaaaatta attcaaattt aatactaaat aacaaaatta aaattttcaa aggaaaaata
     3241 ttgaagttat tattcacttc cttttgttgt tttgcaagtt taatggctag cgatgccatt
     3301 aactgcgaca acattaaaaa taataaaaca ttgctaaatg aaagttcaaa tttagattat
     3361 ttaaatatag cttcaagctg taaagaatct ttaaaaaatc aagattttac aaaaaaactc
     3421 tatgcaattt ccaatgaaat tcgcggaagc aatagctctt gtaatggtgt ggcttatttg
     3481 ccaaaattac aacaatttga ttttttatta ttaaaaatag ctatcgatcc catcgcttat
     3541 caaaaaactt tagatacacc cgaaaattta gaaaaaaaat atgatatttt aaaatcttat
     3601 tttagatatt gggcatatca aagcatagga aattttagac tttacaaagc tttttggcaa
     3661 gaatacaata atgctataga acctttagaa aagtattttg aaagtaattt taattttgac
     3721 aaaggcagta atatttacta tactagcaat gccttaaacg aatttttaaa ttgggctgtt
     3781 ggtgaaacaa aaatttacaa agacattagt cctttagcaa aaatcatgtc aaataaaaat
     3841 tattcagtat cttatataca agattttatt ttttcaaata atccaagcca agatgacctt
     3901 actatagcct tgcaagcagc gcttctaaat caaagagaaa aagaaatttt agaacttttg
     3961 attcgttttg gcgctaggat tgacgaaggt tatgaaagtg ctatttttta tgcattggaa
     4021 agttatgaaa atacaaactt tttaatccaa aatggagcaa atgttaatca agccaatgcc
     4081 tttggtaaaa ccccactttt ttatgccata gagtttaatc gtcttgatat cataaaacta
     4141 cttcttgata atggagcaaa tgttaatcaa aaatatatta ataacaatga aaaattagca
     4201 ttaagcgcga acataggttc aaatacgcct tattttatta cattttgtgc tctagagcac
     4261 acttcaaaaa atgttttaat gcatgctgca gcctatggaa atgttgaaat tttaaaactt
     4321 cttatttcaa aaggagcaaa ttttaatgct gttgatgatc ttggttttaa tgcactcgac
     4381 tttgcgctat cagcaggtaa aaaagaaaat gctgattatc taaaaagctt gggtttaaaa
     4441 gcaaacgaaa atctatttta cggaggtagt ttagaatgaa aaccgcattt attacaggag
     4501 ctagttcagg ttttggtaga gcttgcgttg aagcttttat acaagaaggc tacaaagcaa
     4561 tcgcccttgc tagacgcaaa gagcgtctag aagagttaaa aaatgcttac aaagataaga
     4621 tttacacgct ttgcatagat gtaagaaatc aaaaagaaat ctttgaggct attgaaaatt
     4681 tacccaaaga atttcaagaa attgatgtgc tttttaataa tgcaggttta gctttagggg
     4741 tagatgaatt tgataaatta aaccttgaag atattaacac tatggtagat acaaacatca
     4801 aaggattttt atatgttgca aaagctatta ttcctatact tcgcaaacaa aaaaatgctt
     4861 atatttttaa cttaggttcg gttgcgggac gcaatcctta ttttggaggc aatgtgtatt
     4921 gtggaaccaa agcctttgta ggacaatttt cattggcctt aagaaatgat cttagaggaa
     4981 gcaatatcaa agtaacaaac attgctccag gactttgcaa aactgaattt agtgaagtgc
     5041 gttttaaagg agatatccaa aaagctgatg cagtgtatga aaatacgcaa tttatcagtg
     5101 ctaatgatat tgccaaagtg gtaatgtcta tcattaacct accaagccat attaatgtta
     5161 atgaaatcga gcttatgccg gtaacacaaa cttggaatgg attttatata gaaagagatg
     5221 aatgaataaa tttttagttt cattgttttt acctttagtt gcatttgcaa actcctcaga
     5281 agcagctgca aatgctaatt tatttggagc ttttacgctt ataccacctt tagttgctat
     5341 tgctttagcc tttatcacaa aagatgttat tttatcgctc tttactggag ttttaagtgg
     5401 aacttttcta cttagccttt ctacaaatat ttttaaagca caacatttaa cttttgtaaa
     5461 ttattacaat actacagtag aatctttttc aaaaattatt tcctatatct taggttcaac
     5521 ttcagatcca gtaaatgcag gaatcatttt acaaattctt tgtataggtg gtcttgtggc
     5581 acttatcaca aaaatgggag gtgcaaaagc tgtagcatta aaatttgcca aaagagccaa
     5641 atcagctgta tcagctcaag ttaacacttg gtttttaggg cttttaatat tttttgatga
     5701 ctatgctaat ttactaatcg taggtccaat tatgcgtcct ttggcagata aatttaaaat
     5761 ttctcgtgaa aaatttgcct ttattatcga ctctaccgca gctcctgtgg caggaatagc
     5821 tgtaatttct acttggatag gcttagaagt ttctttaatt aaaaccgctt atgaacacat
     5881 aggcattagc aatattagtg cttttggaat ttttgttgaa accatacctt atcgttttta
     5941 taatatcttc atgctttttt ttgtagtcat gactgcaatc atggggcgtg agtttggttc
     6001 tatgtacaag gctgaagtgc gtgcaagaac cacaggacaa attgctcctc tacctaaatc
     6061 aggcacacta gatactactg aattagaaga tcagttttta gcaccaaaag aaggtattaa
     6121 aattcgtgct tttgatgcta ttgttcctat ttttacttta atcattttag ctatattagg
     6181 attttatttt aatggactta gcactttaga aggcgaagaa cttgcaaaag caagtaccaa
     6241 tcctttgtct tttgaaactt ttagagctgc ttttggaaat gctgattctt ctgtggtgtt
     6301 attccaagct gctttgtttg ctgctattgt agcgattttt atcggggtgc gtcgtaaaat
     6361 tttcaatctt aaagaagcgg tagaaacttg gatatatggc tggaaaacca tgatttttac
     6421 catagtattg cttttatttg cttggtcact ttcaagcata gtaaaagatc taggaacttc
     6481 tttatttatc actagtttgc ttgcagacaa attgcctgag tttattttgc ctgctactat
     6541 ttttgctttt gcttcagcca tttcttttgc cataggaaca agctatggaa ctatggggat
     6601 tttaatgcct ttagctgtgc ctttagctca tgaaatcgcc aaaatcaatg gtatggatgc
     6661 aaacgctatg catcattata tggttattaa tataagctgc gttttaacag gtgcgatttt
     6721 tggaaaccat tgctcaccaa tttcagataa tgtaatcctt tcatctatga gtgcaaaatg
     6781 cgatcatatg gagcatgtaa gaacacaaat tccttatgct ttatttatct gtggcatttc
     6841 tttaatcgct ggatatattc ctgtatcttt aggacttagc gtttggtttg tcttgccttt
     6901 aaatttcata cttattgcac ttttactaag actcatcgga aagaaagttc catgagtctt
     6961 gaaaattttg gaaattttct cactttagat gaaaaacatt ctttcataaa aaaatatttt
     7021 aaagaatttt atacaaagga ttttaaactt tttgcttcaa aagataaaca ttatcgtaca
     7081 agagctgaac tttcatttta tcatgaaaat gatacgcttt tttatgcaat gtttgatcca
     7141 aaaagcaaaa aaaagtacat tatagaatat ttagattttg ctgatgaaaa aatttgtgct
     7201 tttatgccaa gacttctaga atacttgcgt caagataata aattaaaaga aaaacttttt
     7261 ggtgtagaat ttttaaccac aaagcaagaa cttagcataa ccttactcta tcataaaaat
     7321 atagaagata taaagtcaaa tttagaaaat ttaagcaata ttcttcatat caacctcata
     7381 gcaagaagta aaggcaaaaa acttattttt aaaacagaaa atctaagaca aactttaaat
     7441 attcaagata gaaaaatatt ttatgaattt aacaacgatt gttttattca gcctaatact
     7501 gctataaatg aaaaaatgat tacttgggtg tgtgaaattt taaacactca aaaaagaatg
     7561 gatttgcttg agctttactg tggatatgga aattttactt tagctttagc gccattcttt
     7621 tttaaaattt tagccactga aatttcaaaa agcaatatta attttgcttt aaaaaattgc
     7681 gagcttaaca atacaacaaa tatccacttt gcaagacttt caagcgaaga attaagtctt
     7741 gctatcaaaa aagaaagaga attttttcgt ttaaaagata ttcgattaga tgattttaat
     7801 ttctctcatg ttttagttga tccaccccgt gcaggacttg ataaaagcgt aattgactta
     7861 ataaaaaaat atgaaaatat tatttatatt tcttgcaatc ctatcacttt aaaagaaaat
     7921 ttaaaagaat taagcctaac acatagagtg gaagagtttg ctctgtttga tcaatttgtc
     7981 aatactccac atcttgaatg tggagtattt cttagcaagg tataaaaaaa taattcatta
     8041 atttagccag tattactatc gcgatacaaa gcacaaatac aaaagggtgg ataaaaacac
     8101 cgagtggatt tttcttcttt aatataaaat gacaaaataa agaaaaaaca actaaagata
     8161 aaattccaaa agccaaaata atttttacag caaaaagtaa atttaaaggt ttaaaatgaa
     8221 aacctgccaa agcacctcca cttaaaaaaa gcaaaagaac aacaaaaggc attattttaa
     8281 ctccagtagc actaaaaaga cttttgtcaa aattaggatt tttcttttta actacaccca
     8341 aaacaaatac atcaacaaac aaataaccta taaacaaaat agcacaaaga agatggattg
     8401 ttaaagtata tggataaaat tcttccattt ttccctcctt attaaacttc ggaatttgct
     8461 atattataac acttttttca ttttttgaat tcactttagt taatttttta atcatttaag
     8521 ataaaatacc aaaacaaagg ttaacaatga acgaaaaaga aactatctct tatattataa
     8581 atacaagtaa aaatattgtc atatttgctt taagtccaga taagacaaaa gctt
//
LOCUS       DAPIVO010000065         8583 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.065, whole genome shotgun sequence.
ACCESSION   DAPIVO010000065 DAPIVO010000000
VERSION     DAPIVO010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8583)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8583)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8583
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.065"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            24..449
                     /gene="rplM"
                     /locus_tag="RJ239_001509"
     CDS             24..449
                     /gene="rplM"
                     /locus_tag="RJ239_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HDV7331614.1"
                     /translation="MTKITKPNEVKREWIVLDAEGKRFGRLLTEVATILRGKNKPCFT
                     PNVDCGDYVIIINASKAVFTGANKAEDKLYHRHSGYFGSVKSEKFGDLLEKNPAKLYK
                     LAVRGMLPKTNLGRAMLKKLKIYAGSEHPHTAQIAKEGK"
     gene            452..841
                     /gene="rpsI"
                     /locus_tag="RJ239_001510"
     CDS             452..841
                     /gene="rpsI"
                     /locus_tag="RJ239_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HDV7331615.1"
                     /translation="MATTYATGKRKTAIAKVWVKPGSGKISVNGVDLNTWLGGHEAIK
                     LKVVQPLLVTKQETSMDIKATTLGGGYSAQAEALRHGISRALAAMDADFRALLKPKGL
                     LTRDSRTVERKKYGRRKARRSPQFSKR"
     gene            966..1925
                     /gene="cadF"
                     /locus_tag="RJ239_001511"
     CDS             966..1925
                     /gene="cadF"
                     /locus_tag="RJ239_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin-binding outer membrane protein CadF"
                     /protein_id="HDV7331616.1"
                     /translation="MKKIFLCLGLASVLFGADNNVKFEITPTLNYNYFEGNLDMDNRY
                     APGIRLGYHFDDFWLDQLEFGLEHYSDVKYTNTNKTTDITRTYLSAIKGIDVGEKFYF
                     YGLAGGGYEDFSNAAYDNKSGGFGHYGAGVKFRLSDSLALRLETRDQINFNHANHNWV
                     STLGISFGFGGKKEKAVEEVADTRATPQAKCPVEPREGALLDENGCEKTISLEGHFGF
                     DKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANEL
                     EKYGVEKSRIKTVGYGQDNPRSSNDTKEGRADNRRVDAKFILR"
     gene            1925..2566
                     /locus_tag="RJ239_001512"
     CDS             1925..2566
                     /locus_tag="RJ239_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDV7331617.1"
                     /translation="MNKTILFDLDGTLIDSTDAILNSFQGAFKALGLTSKNNEEIKNL
                     IGYPLEQMFRMLYPDKVNLSKEFVLAYREIYAQIYLEQTTLLPKAKEALELGSEIADL
                     GIVTTKGGKFTPILLDYLGVKKFFKTLITLEDVTNPKPSSEPIILALKGLNKTQENAY
                     MIGDTILDIQAAISANITPLALTCGYGNENELKAHSMVFLNAYEAVNYIARLN"
     gene            2659..6219
                     /gene="nifJ"
                     /locus_tag="RJ239_001513"
     CDS             2659..6219
                     /gene="nifJ"
                     /locus_tag="RJ239_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HDV7331618.1"
                     /translation="MGKIMKTMDGNEAAAYAAYAFTEVAGIYPITPSSPMADYTDMWA
                     AAGKKNLFGVPVKIVEMQSEAGAAGSVHGSLQAGALTTTYTASQGLLLKIPNMYKIAG
                     QLLPCVIHVAARSLAAQALSIFGDHQDIYAARQIGFAMLCSHSVQETMDLAGVAHLAA
                     IKGRVPFLHFFDGFRTSHEIQKVEVMDYAHFDRLLDREALLEFRNNALNPENPKTRGT
                     AQNDDIYFQTREVSNRFYDALPDVVNEYMQEISKITGREYKPFTYYGHKEPECVIVAM
                     GSVTQALEEVVDYLNAKGEKVGILKVYLYRPFSLKYFFDVMPKSVKKIAVLDRTKEPG
                     SLGEPLYLDVKSAFYGRENAPVIVGGRYGLSSKDVDPAQMIAVFENLKLDNPKDGFTV
                     GIIDDVTHTSLSTGEKISLGDESTIECLFYGLGADGTVGANKNSIKIIGDKTDFYAQA
                     YFAYDSKKSGGYTRSHLRFSKKPIRSTYLVSTPHFIACSVAAYLEIYDVLAGIRKGGT
                     FLLNSIWNAEETIRQLPDAVKKTLAEKEVNFYIINATKLARDIGLGNRTNTIMQSAFF
                     KLAKIIPYEDAQKYMKELAYKSYSKKGDAIVEMNYKAIDVGADGLVKVEVDPNWKNLE
                     LKEKEQTNAYKGTEFVEKIVKPMNAAKGDDLPVSAFLGYEDGSFEHGTTEYEKRGVGV
                     MVPRWIEANCIQCNQCASVCPHAVIRPFLINDEEMANAPRGVKDHALEAKGTKGEKLS
                     FKIQVSPLDCTGCELCVHECPTKEKSLVMVPLQEEMDFGEQENADYLFKEITYKDDIL
                     NKETTKGAQFAQPLFEFHGACPGCGETPYITLITRLFGERMIVANATGCSSIYGGSAP
                     STPYRKSVKNGHGPAWGNSLFEDNAEFGLGMKIATENTRHRIEHIMNESMQEVPNALS
                     ALFKDWIANKDNGAMSVEIKDKMIPILEQNKNIKAVQDILELKQYLSKKSHWIFGGDG
                     WAYDIGYGGLDHVLASGENVNILVLDTEVYSNTGGQSSKSSRTGAVAQFAAAGKPIQK
                     KDLGQIAMTYGYIFVAQVNSTANYTHLIKAITAAEAYDGPSLVICYSPCIAHGIKGGL
                     GYSGEQGELATKCGYWPLYTFDPRLEEQGKNPLTLTGKEPDWDLYEQFLMNEVRYNSL
                     KKANPEHAAELFERNKKDAQRRYRQLKRIAMADYSNEVES"
     gene            6243..6560
                     /locus_tag="RJ239_001514"
     CDS             6243..6560
                     /locus_tag="RJ239_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transformation system protein"
                     /protein_id="HDV7331619.1"
                     /translation="MCFSTLFAQDNFEEYFKLIDKENRINFNTLQNPFVNPTFEKLRH
                     IKITAIMLDKVKIYDRWYKKGDMIDDAIIYEINTKEIKFQYDNLEIAIQINKNDKINI
                     NIN"
     gene            6532..7950
                     /gene="mshL"
                     /locus_tag="RJ239_001515"
     CDS             6532..7950
                     /gene="mshL"
                     /locus_tag="RJ239_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus (MSHA type) biogenesis protein MshL"
                     /protein_id="HDV7331620.1"
                     /translation="MIRLILILINILFCHYLYALDCQKRLFDISINEKLSIQESLDEL
                     AKYCSFSIIVKDKIAKEKLETLQNSVNIHQMSLDEIFNFFIKEHDLSYDFDGKILRIS
                     GINTKIFKISYITSIREGQSITKASVDAKPRQSEYSGSFDDAEDNMIKSMEKFDFWQN
                     IEKEIIVLLKNSHEDYEAKTPIINPNAGLIIVTGTNSQLKSVKNYLQKLENRLKKQVI
                     IDVSILAVSLNESHSSGINWQNFNIGLNSQVNNENSFIQFQNGQGFVKNLGLRANLNF
                     DSIINFLSQNGKTSVLSNPKLMALNNQQAIISVGDTINYQVKESSKGTENGTTVSESY
                     NNYSIFVGILLNILPEISDDGKIMLRINPSLSDFKYPEDNKRQKEPRTIAPDTIQKKL
                     SSVVQVENNQTLILGGLISHDKSNEKNSINFLSKIPILGSLFKGEVLNSKATEIVFII
                     TPSIVDSVNAPSLKDLGFKHYE"
     gene            7943..8551
                     /locus_tag="RJ239_001516"
     CDS             7943..8551
                     /locus_tag="RJ239_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7331621.1"
                     /translation="MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLA
                     KKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILDEVGMYDYAMLESIRIYSDSISF
                     VLSSHKKLNILKKEHFKSRLSACFKLKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
                     QGNLRYIDKTLKSFYEINSFFDKNKSQEYILKLSALENGLLR"
BASE COUNT         3084 a         1135 c         1600 g         2764 t
ORIGIN      
        1 aatttttggc aaaggtaaaa attatgacaa agataacaaa gccaaacgaa gtaaaacgag
       61 aatggattgt tttagacgca gaaggcaaac gctttggtcg tcttttaact gaagtagcaa
      121 caattttgag aggtaaaaac aaaccttgct ttactccaaa tgttgattgt ggtgattatg
      181 taattatcat caatgcttca aaagctgtat ttacaggtgc taataaagca gaagataagc
      241 tttatcatag acattcagga tattttggaa gtgtaaaaag cgaaaaattt ggtgatttac
      301 ttgaaaaaaa tcctgcaaaa ttatataaat tagcagttag aggtatgctt cctaaaacaa
      361 atttgggcag agctatgctt aaaaaattaa aaatctatgc gggtagtgag cacccacaca
      421 ctgcacaaat tgctaaagaa ggaaaataat catggcaaca acatacgcaa caggtaagag
      481 aaaaactgct atcgcaaagg tatgggtaaa accaggtagt ggtaaaatta gtgttaatgg
      541 tgttgattta aacacttggc ttggtggaca cgaggcgatt aagcttaaag tggttcaacc
      601 tttacttgtg actaaacaag aaacttcaat ggatattaaa gcaactactt taggcggggg
      661 ctatagtgct caagctgaag ctttaagaca tggaatttca agagctttag cagctatgga
      721 tgctgatttt agagccttat taaaacctaa aggacttctt actagagata gtagaactgt
      781 tgagcgtaaa aaatatggac gccgcaaagc aagaagaagc ccacaattct ctaaacgtta
      841 atatttttgg tgggattttc ccacctttct acaatttttt ataaaactca tccttttttc
      901 tatcatttat gttataattg caaaatttaa atttttattt tataacacaa tgaaaggttt
      961 tttctatgaa aaaaatattc ttatgtttag gtttggcaag tgttttattt ggtgctgata
     1021 acaatgtaaa atttgaaatc actccaactt taaactataa ttactttgaa ggtaatttag
     1081 atatggataa tcgttatgca ccagggatta gacttggtta tcattttgac gatttttggc
     1141 ttgatcaatt agaatttggg ttagagcatt attctgatgt taaatataca aatacaaata
     1201 aaactacaga tattacaaga acttatttga gtgctattaa aggtattgat gtaggtgaga
     1261 aattttattt ctatggttta gcaggtggag gatatgagga tttttcaaat gctgcttatg
     1321 ataataaaag cggtggattt ggacattatg gcgcgggtgt aaaattccgt cttagtgatt
     1381 ctttggcttt aagacttgaa actagagatc aaattaattt caatcatgca aaccataatt
     1441 gggtttcaac tttaggtatt agttttggtt ttggtggcaa aaaggaaaaa gctgtagaag
     1501 aagttgctga tactcgtgca actccacaag caaaatgtcc tgttgaacca agagaaggtg
     1561 ctttgttaga tgaaaatggt tgcgaaaaaa ctatttcttt ggaaggtcat tttggttttg
     1621 ataaaactac tataaatcca acttttcaag aaaaaatcaa agaaattgca aaagttttag
     1681 atgaaaatga aagatatgat actattcttg aaggacatac agataatatc ggttcaagag
     1741 cttataatca aaagctttct gaaagacgtg ctaaaagtgt tgctaatgaa cttgaaaaat
     1801 atggtgtaga aaaaagtcgc atcaaaacag taggttatgg tcaagataat cctcgctcaa
     1861 gcaatgacac taaagaaggt agagcggata atagaagagt ggatgctaaa tttattttaa
     1921 gataatgaat aaaactattt tatttgattt agatggcact ttaattgatt ctactgatgc
     1981 tattttaaat tctttccaag gagcttttaa agcccttgga ttaacttcta aaaataatga
     2041 agaaatcaaa aatctcatag gttatccttt agagcaaatg tttagaatgc tttatccaga
     2101 taaagtaaat ttaagtaaag aatttgtatt agcttatcgt gaaatttatg cacaaattta
     2161 tttagaacaa accactcttt tgcctaaagc aaaagaagca ttagaacttg gaagcgaaat
     2221 tgcagatctt ggtatagtta caacaaaagg aggtaaattt actccgattc tgcttgatta
     2281 tttgggagtt aaaaaattct ttaaaacttt aattactctt gaagatgtca caaatccaaa
     2341 gccaagttcc gaacctataa ttttagcctt aaaaggactc aataaaactc aagaaaatgc
     2401 ctatatgata ggcgatacaa tattagatat tcaagctgca atttctgcta atatcactcc
     2461 tttggcctta acttgtggct atggcaatga aaatgaatta aaagctcatt ctatggtatt
     2521 tttaaatgca tatgaggctg ttaattatat agctagatta aactaatttc aagttttcgt
     2581 taaacgcctt ttaagagaat ttatagtaaa ttgatagtta aaaaattata aaaattatca
     2641 atataaagga aggtctcaat gggtaaaatt atgaaaacta tggacggaaa tgaggctgct
     2701 gcatacgctg cgtatgcttt tactgaagtt gctggaattt atcctattac acctagttct
     2761 cctatggctg attataccga tatgtgggca gctgcaggaa aaaaaaatct ttttggagtt
     2821 cctgtaaaaa tcgtagaaat gcaaagtgaa gcaggagctg caggtagtgt gcatggatct
     2881 ttacaagctg gggctttgac tacaacttat acggcttctc aaggattact ccttaaaatt
     2941 ccaaatatgt ataaaatagc aggtcaatta ctcccctgtg taatccatgt agcagcgcgt
     3001 tctttggctg ctcaagcttt gtctatcttt ggtgatcatc aagatattta tgcagcaaga
     3061 caaattggtt ttgctatgct ttgttcgcat tctgtgcaag aaaccatgga cttagctggt
     3121 gtagcacatt tagctgcaat taagggaaga gtgccatttt tacatttttt tgatggtttt
     3181 agaacaagcc atgaaattca aaaagttgaa gtaatggatt atgcgcattt tgatagatta
     3241 ttagatagag aagctttgct tgaatttaga aataatgctt taaatccaga aaatccaaaa
     3301 acacgtggaa cagcacaaaa tgatgatatt tattttcaaa ctagagaagt aagcaatcgt
     3361 ttttacgatg ctttacctga tgttgttaat gaatatatgc aagaaatttc aaaaattaca
     3421 ggtagagaat acaaaccatt tacttattat ggtcacaaag agccagagtg tgtgattgtt
     3481 gctatgggtt ctgtaactca agcacttgaa gaagtggtgg actatcttaa tgccaagggt
     3541 gaaaaggtag ggattttaaa agtttatctt tatcgcccat ttagtttaaa atatttcttt
     3601 gatgttatgc caaaatcagt gaaaaaaatc gcggttttag atagaaccaa agaaccagga
     3661 agtctcggag aaccacttta tcttgatgta aaatcagctt tctatggaag agaaaatgct
     3721 cctgttatag tgggtggaag atacggactt tcttcaaagg atgttgatcc tgctcaaatg
     3781 atagcagtat ttgaaaatct taaacttgat aatccaaaag atggctttac tgtaggtata
     3841 attgatgatg taactcatac ttcactgagt actggagaga aaatttcact tggagatgaa
     3901 agtacgatcg aatgtttatt ttacggactt ggtgctgatg gaactgtggg tgcaaataaa
     3961 aactcgatta aaatcatcgg agataaaacg gatttttacg ctcaagctta ttttgcttat
     4021 gattctaaaa aatcaggggg ttatacaaga agccatttaa gattttctaa aaaacctatc
     4081 cgttcaactt atcttgtttc aactccgcat tttatcgctt gttcggtagc ggcttatttg
     4141 gaaatttatg atgttttagc aggaattcgc aaaggaggaa ctttcctttt aaatagtatt
     4201 tggaatgctg aagaaaccat aagacaactt ccagatgcag taaagaaaac tttagctgaa
     4261 aaagaagtaa atttttatat catcaatgca accaaactag ctcgtgatat aggtttggga
     4321 aatcgtacaa ataccattat gcaatcagcc tttttcaaac ttgcaaaaat cattccttat
     4381 gaagacgcac aaaaatacat gaaagagctt gcgtataaat cttatagtaa aaaaggcgat
     4441 gctattgtag aaatgaatta caaggctatt gatgtgggtg ctgatggact tgtaaaagtt
     4501 gaagtggatc caaattggaa aaatttagag cttaaagaaa aagaacaaac caatgcctat
     4561 aaaggtactg aatttgttga aaaaatcgta aaacctatga atgcggctaa gggtgatgat
     4621 ttacctgttt cagccttttt aggttatgaa gatggaagtt ttgaacacgg cacaaccgaa
     4681 tacgaaaaac gcggtgttgg ggttatggta ccaagatgga tagaggcaaa ttgtattcaa
     4741 tgcaatcaat gtgcttcagt ttgtccgcat gctgttatca ggccattttt gattaatgat
     4801 gaagaaatgg caaatgcacc tcgcggtgta aaagatcatg ctttagaagc taaaggaacc
     4861 aaaggagaaa aattaagctt taaaattcaa gtttctccac ttgattgtac aggctgtgag
     4921 ctttgtgttc atgagtgtcc tactaaagaa aaatctttgg ttatggtacc acttcaagaa
     4981 gagatggatt ttggtgagca agaaaatgcg gattatttat ttaaagaaat tacttataaa
     5041 gatgatattt taaataaaga aaccacaaaa ggagcgcaat ttgcccaacc tttatttgaa
     5101 ttccatgggg catgtcctgg atgtggggaa actccttata ttactttaat tacaagattg
     5161 ttcggtgaaa gaatgattgt ggctaatgct acaggttgta gttctattta tgggggttca
     5221 gctccatcaa ctccttatag aaaaagtgtg aaaaatggac acggtcctgc ttggggaaat
     5281 tcactttttg aagacaatgc tgagtttggt ttgggtatga aaattgcaac tgaaaataca
     5341 agacaccgca ttgaacatat catgaatgaa agtatgcaag aagttccaaa tgctttatca
     5401 gctcttttta aagattggat tgcaaataaa gacaatggtg ctatgtctgt ggaaattaaa
     5461 gataaaatga tccctatttt agagcaaaat aaaaatatta aagctgtaca agatatatta
     5521 gagcttaaac agtatttaag taaaaaatct cactggattt ttggtggtga tggttgggct
     5581 tatgatatag gctatggcgg acttgatcat gttttagcaa gtggagaaaa tgtaaatatt
     5641 ttagtgcttg atacagaagt ttattctaat acaggcggtc aaagttcaaa atcttctaga
     5701 acaggagctg tagcacagtt tgcagcagca ggcaaaccta tacagaaaaa agatctaggt
     5761 caaattgcta tgacttatgg ttatattttt gtagcacaag taaattcaac ggcaaattat
     5821 actcatctta tcaaagctat cactgcagct gaggcctatg atggaccatc tttggtgatt
     5881 tgttattctc cttgtatagc tcatggtatt aaaggtgggc tgggttactc aggagagcaa
     5941 ggtgagcttg ctacaaaatg tggttattgg ccactttata cctttgatcc tcgtttagaa
     6001 gagcaaggaa aaaatccttt aactctaaca ggaaaagaac ctgattggga tttatatgag
     6061 caatttttga tgaatgaagt gcgttataat tcacttaaaa aagcaaatcc tgaacacgct
     6121 gctgagcttt ttgaacgcaa taaaaaagac gctcaacgtc gctatagaca gcttaagcgt
     6181 attgctatgg ctgattatag caatgaggtc gaaagctgat aaaatatatt tttagtgcta
     6241 cattgtgttt tagcactttg tttgcacaag ataattttga agagtatttt aaacttatag
     6301 ataaagaaaa tcgtataaat tttaatactc ttcaaaaccc atttgtgaat cctacttttg
     6361 aaaaattaag acatattaaa attactgcaa ttatgcttga taaagtaaaa atttatgatc
     6421 gatggtataa aaaaggtgat atgattgatg atgctataat atatgaaata aatactaaag
     6481 agattaaatt ccaatatgat aatttagaaa ttgcaatcca aataaataaa aatgataaga
     6541 ttaatattaa tattaattaa cattcttttt tgccattatc tttatgcttt agattgtcaa
     6601 aagcgtcttt ttgatatcag tattaacgaa aaattaagca tacaagaaag tcttgatgag
     6661 cttgcaaaat attgttcttt cagtattatt gttaaagata aaattgccaa agaaaaatta
     6721 gaaacattgc aaaactctgt caatattcat caaatgagtt tggacgaaat ttttaatttt
     6781 tttatcaaag agcatgatct tagctatgat tttgatggta aaattttaag aatttcaggc
     6841 attaatacga agatttttaa gataagttat atcacttcta tcagagaagg acaaagcata
     6901 actaaagcgt ctgtagacgc taaaccaagg caaagtgaat atagcggtag ttttgatgat
     6961 gcagaagaca acatgattaa aagtatggaa aaatttgatt tttggcaaaa tatagaaaaa
     7021 gagattattg tattattaaa aaattctcat gaagattatg aggctaaaac tcccattata
     7081 aatcccaatg caggtcttat tatagtaact ggaacaaatt ctcagttaaa aagtgtgaaa
     7141 aattatttgc aaaaactaga aaatcgtctt aaaaaacaag ttattatcga tgttagcata
     7201 cttgctgtga gtttaaatga aagccattct agtgggatta attggcaaaa ttttaatata
     7261 ggtttaaatt cacaagtaaa taatgaaaat tcttttattc agtttcaaaa tgggcaaggt
     7321 tttgttaaga atttgggttt aagggcgaat ttaaattttg attctattat taactttctt
     7381 tctcaaaatg gaaaaactag cgtgctttct aatccaaagc ttatggcttt aaataaccaa
     7441 caagccatta tttctgtagg cgatactata aattatcaag ttaaagaaag ttctaaaggt
     7501 actgaaaatg ggactactgt tagtgaaagt tataataatt attctatttt tgtaggcatt
     7561 ttactcaata tcttgcctga aatttctgat gatggaaaaa taatgcttag gattaatcca
     7621 agcttaagtg attttaagta tccagaagat aataaacgac aaaaagaacc aagaactatt
     7681 gctcctgata ccatacaaaa aaagctttct agtgttgtgc aagtagagaa taatcaaact
     7741 ttaattttag gcggattgat ttctcacgat aaatctaatg agaaaaattc tatcaatttt
     7801 ctatcaaaaa ttccaatcct aggttctttg tttaaaggag aagttttaaa ttctaaagca
     7861 accgaaatcg tttttattat cactccaagt atagtagata gcgtaaatgc tccaagtctt
     7921 aaagatctag gatttaagca ttatgagtaa aattattcca tttagagaag aaatttttca
     7981 tcaaatcaat caaattttag aaagccaaaa agcttttatt tttttatggg gaaaaagtgg
     8041 tagtggtaaa agtgtattgt tgcaaagatt ggcaaaaaaa tataatgttg attttattaa
     8101 tgaaaatttt aaagatcaga gtttcttaaa agaaaaaatt gagtttttga tttcacaagg
     8161 tcagagttta atcattcttg atgaagtggg aatgtatgat tatgcaatgc tagaaagcat
     8221 caggatttat agtgattcta taagttttgt tttaagttct cataaaaagt taaatatact
     8281 taaaaaagag cattttaaaa gtcgtttaag tgcttgtttt aaattgaaaa atattagtct
     8341 tttagaactt gatgattata ttaaattgaa atttggaatg aatttttcaa ataaatgtct
     8401 taagttttta caaaaaattt ctcaaggaaa tttaagatat attgataaaa ctttaaaaag
     8461 tttttatgag ataaatagtt tttttgataa aaacaaaagt caagagtata ttttaaagct
     8521 tagtgcttta gagaatggct tattaaggta agatatgcaa gaaagaatta aagagcttga
     8581 gct
//
LOCUS       DAPIVO010000066         8552 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.066, whole genome shotgun sequence.
ACCESSION   DAPIVO010000066 DAPIVO010000000
VERSION     DAPIVO010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8552)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8552)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8552
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.066"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            18..443
                     /gene="exbB"
                     /locus_tag="RJ239_001517"
     CDS             18..443
                     /gene="exbB"
                     /locus_tag="RJ239_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HDV7331622.1"
                     /translation="MEFLKDYIDLIIFLILGIMAFIAFWCVVERMLFFRKINFKNYEN
                     QEQFDDAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLAGNIDVKSIVVGLSL
                     ALKATALGLLVAIPALMAYNALLRKVSLLSNAYKANKNA"
     gene            436..825
                     /gene="exbD"
                     /locus_tag="RJ239_001518"
     CDS             436..825
                     /gene="exbD"
                     /locus_tag="RJ239_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HDV7331623.1"
                     /translation="MLKLPKNEGLNIVPFIDIMLVLLAIVLSISTFIAHGKIQISLPS
                     SENATNISNNEKKLLITIDEKNTFYLNDKLADLNEVQNAIFSLDKKTIVELKSDKNAK
                     FESFVKIIDFLKAKEHENFQILTEKNK"
     gene            822..1505
                     /locus_tag="RJ239_001519"
     CDS             822..1505
                     /locus_tag="RJ239_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDV7331624.1"
                     /translation="MKTLFLNHKYQASYITFIVFIPLLFVIFHSNDFFKMEIKNEDSF
                     SLAIKQFTQTNPTNETKPTESIIEPIKPKPQPKVIKKTPEKMQKKIKKTPPHPIPNKT
                     PIAPTQEVKTFAKTTDTNVKPKITQLTQGKDNHPVLKEIQKAIQQAQFYPRQAKKMRM
                     QGTVKVEFLWKENKTLADLKIIEISGYDLLDKSALESIRKASLNFPHYNGDLRITLPI
                     IYDFKTLRG"
     gene            complement(1518..2387)
                     /locus_tag="RJ239_001520"
     CDS             complement(1518..2387)
                     /locus_tag="RJ239_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331625.1"
                     /translation="MKIDTSASLTHSLTNNVDKKELSVLKKEDQDKIPVQDLSSLNSD
                     GVKVVFENKQGELIALNLSDENYSSLQKNFGSYMNYVARNDGSIRLNGEVNQFVSNWF
                     ESVKDNFGSLNSNLNNKQQSVKLNFNTSTLQQSMQNLGFKTSDEKISDDANIEEKLNF
                     FIDKDVNKDGKVDDSDVKEPSMREILSDIKEASGGGANAMKTIDPQKINKKDDKENNI
                     KEKEDEDLLQKAQEKGLSALSADEQAKLEASNPEEFEKLKQKSLQELSQNLSKDFQNK
                     IENQEAQIVDKRV"
     gene            complement(2391..2552)
                     /locus_tag="RJ239_001521"
     CDS             complement(2391..2552)
                     /locus_tag="RJ239_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331626.1"
                     /translation="MLKIILVLSILSSFAFANSCANYEQELKKCNSLKNSHERKMCRL
                     GLFAKCKKG"
     gene            2647..3630
                     /locus_tag="RJ239_001522"
     CDS             2647..3630
                     /locus_tag="RJ239_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MnmA/TRMU family protein"
                     /protein_id="HDV7331627.1"
                     /translation="MKALALFSGGLDSMLAMKLITAQGIEVKALNINIGFGSTSDKSE
                     IMKKRAAMVGADFEMIDVRNSYLQEVLFNPQYGYGKHFNPCIDCHAFMFKTALAMLKE
                     ENASFIITGEVLGQRPMSQRSDAMAKVKKLALDEEDLILRPMCAKNLPLTKPEREGWV
                     DREKLEGIIGRSRKRQLELAAKFGLEDFESPGGGCLLTLDSFAKKIRDFIEFDKDMQV
                     NDAQLLKYGRHLRLPNGAKMIIGRNELENTLLKGLKTPKYEAIEIGDLIGAYSLVDEK
                     ISEKDLELALKIALTYTKHEVGKSYELKFKNQAYTSIAFENKADINQFFIS"
     gene            complement(3716..4804)
                     /gene="aroC"
                     /locus_tag="RJ239_001523"
     CDS             complement(3716..4804)
                     /gene="aroC"
                     /locus_tag="RJ239_001523"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HDV7331628.1"
                     /translation="MNTFGTRLKFTSFGESHGVAVGCIIDGMPAGVKFDEEFLQNELD
                     KRKGGSKFATPRKESDKAQVLSGVFEGYTTGHPIAIVVFNENAHSKDYDNLKDLFRPA
                     HADFTYFYKYGIRDHRGGGRSSARESVARVAGGAVAAMLLREFDICVQSGVFGVGTFV
                     SNLKEEEFDFEFAKKSEIFCLDPKLESDFKNEILNARNSKDSVGAAVFTKVSGMLIGL
                     GEVLYDKLDSKLAHALMGINAVKAVEIGEGINASKMRGSCNNDALKDGKFLSNHSGGI
                     LGGISNGENLILKTYFKPTPSIFAKQESIDKFGNNLKFELKGRHDPCVGVRGSVVASA
                     MVRLVLADCLLLNASANLNNLKNAYGLK"
     gene            complement(4804..5478)
                     /locus_tag="RJ239_001524"
     CDS             complement(4804..5478)
                     /locus_tag="RJ239_001524"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HDV7331629.1"
                     /translation="MKNIEKLEQSLTYEFKDKNLLIHALTHKSFKKSYNNERLEFLGD
                     AVLDLVVGEYLFHKFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFILMSVAEENN
                     GGKEKPSILSDALEAIIGAIHLEAGFEFAKTIALRLIEKNFPQIDAKILIKDYKTKLQ
                     EITQGKIGQTPQYETVRAFGPDHLKQFEIALMLDGKELARAIAGSKKEAQQMAAKIAL
                     EKLGAL"
     gene            complement(5465..5905)
                     /gene="rnhA"
                     /locus_tag="RJ239_001525"
     CDS             complement(5465..5905)
                     /gene="rnhA"
                     /locus_tag="RJ239_001525"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HDV7331630.1"
                     /translation="MKHIEIYTDGSCLNNPGFGGWAYILRYKEYQKEGFGAEANTTNN
                     RMELMAIIESLKALKEPCEISLFTDSNLMVQSINEWLEGWIKKDFKGKKNIDLWKEYI
                     KVAKSHKIKAFWVKAHNGHLENERCDTLAREAALKIARENDEKH"
     gene            complement(5892..6878)
                     /locus_tag="RJ239_001526"
     CDS             complement(5892..6878)
                     /locus_tag="RJ239_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331631.1"
                     /translation="MDFFFVEYRDPLVGLIILTILVFVVAVANYIWKIFANKDEEQKL
                     EKFIKKFEMDNAHKELLRNSSLSFGNLSFLAEIFTKSGEFEKATQIYLIALEKCKDKQ
                     EREFIFLSLAKVYFKAGFLERAKEVLLQALKLRPRNIQALKLLKIVYLKLRSYKENLE
                     LLECLFELNEDVQKERDFIKALELCTFNITDEEKKKKLLEFKIEDNPMLGRLVFEKYH
                     MFLGQNFFDICDLLYRENEAFNLENQDFLEFFYALGKISKHDDTHQFVFKNSNFKMLK
                     ILKDNSFNAGLEFSYRCSECKNVMPLFFYHCPVCYEFNTCKIIYEVKNNETH"
     gene            6948..>8552
                     /locus_tag="RJ239_001527"
     CDS             6948..>8552
                     /locus_tag="RJ239_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDV7331632.1"
                     /translation="MITKESIENLSQRLNIVDIIENYIEVKKQGSSFVCICPFHADKN
                     PSMHINPIKGFYHCFACKAGGDAFKFVMDYEKLSFADAVEKVASLSNFTLSYTKEKQE
                     NKKELKSILPSLNAYFKDNLKHHKEVLTYLYQRALNDKDIAKFELGFAGASEDSIRLL
                     QNQKIPLEDAMSVGALKKDENNEFYASFIWRITFPIYDHKDLLVGFGGRTLNPNVPAK
                     YVNSPQNILFDKSRIFYAFNIAKENIAKKKEIIVCEGYMDAIAFHKAGFNNAVAVLGT
                     ALTEHHLPLIRRYDAKVILCFDNDEAGLKAATRSAFLLSTNKIDGKVAILQGGKDPAE
                     LVAKNESTKLHNILDEGIELGEFYIRRLISTHSIISALDKQKALETIQKFTFNLEPLV
                     ANSYTSLVSNLLKVDEKFIVLSQNSKKTIQTPLISQNKYNFPKEKIHIAELELIAFLK
                     QHPDICNDFKQISDSVCFKHKILLDKILEKKGYEDSDIREFESKNIRKNLNYSEFLLG
                     ICKVNLAFLNNVKIKNSTLALKKQLFT"
BASE COUNT         3081 a         1450 c         1104 g         2917 t
ORIGIN      
        1 tatttttgga gaaaaatatg gaatttttaa aagattacat cgatttaatt atctttttaa
       61 ttctaggaat tatggcattt atagcttttt ggtgtgttgt agaaagaatg ctatttttta
      121 gaaaaattaa ctttaaaaat tatgagaatc aagagcaatt tgatgatgcg attagtgaaa
      181 atttaaccac tatatatatc atctattcca atgcccctta tataggactt ttaggcactg
      241 taataggcat catggttaca ttttacgaaa tgggcttggc gggcaatata gatgtcaaat
      301 ctatagtcgt ggggctttct ttagctctta aagctacagc cttaggactt ttggttgcta
      361 ttcctgcttt aatggcttat aatgccttac ttagaaaagt ttccctctta agcaatgctt
      421 ataaggcaaa taaaaatgct taaactacca aaaaatgaag gtttaaatat agtcccattt
      481 atagacatta tgcttgtttt gcttgctata gtacttagta tttcaacctt tattgcgcat
      541 ggaaaaattc aaatctcact tccttcaagt gaaaatgcta ccaatataag caataatgaa
      601 aaaaaacttc ttataaccat agacgaaaaa aatacttttt atttaaatga taaattagct
      661 gatttaaatg aagttcaaaa tgctattttt tcacttgata aaaaaaccat agtagaacta
      721 aaaagcgata aaaatgctaa atttgaaagc tttgtaaaaa ttatagattt tttaaaagcc
      781 aaagaacatg aaaattttca gattcttact gagaaaaaca aatgaaaact ttatttttaa
      841 atcataaata ccaagcttct tatataactt ttatagtctt tataccttta ctttttgtca
      901 tttttcactc aaatgacttt tttaaaatgg aaattaaaaa tgaagattct ttttctttag
      961 caataaaaca atttacccaa actaatccaa caaatgagac taaaccaaca gaatccatta
     1021 tagaacctat caaaccaaaa cctcagccaa aagttattaa aaaaactcct gaaaaaatgc
     1081 aaaaaaagat aaaaaaaaca cctccacacc caataccaaa taaaacccca atagcaccaa
     1141 ctcaagaagt taaaactttt gcaaaaacaa ctgatacaaa tgtcaaacct aagatcactc
     1201 aattaacaca aggaaaagat aatcaccctg tattaaaaga aatccaaaaa gctatacaac
     1261 aagcacaatt ttatccaagg caagcaaaaa aaatgcgtat gcaaggaact gtaaaagtag
     1321 aatttttatg gaaagaaaac aaaactttag cagatttaaa aatcatagaa atctcgggat
     1381 atgatttgtt agataaaagt gctttagaaa gcataagaaa agcttcttta aattttccac
     1441 actataatgg agatttaaga attacactac ctattatata tgattttaaa accctaagag
     1501 gataaaatta taatttgcta cactctctta tctacaattt gtgcttcttg attttcaatt
     1561 ttattttgaa aatctttact taaattctga cttaattctt gcaaagattt ttgcttcagt
     1621 ttttcaaatt cttcaggatt gctagcctca agctttgcct gctcatcagc acttaaagca
     1681 cttaaacctt tttcttgagc tttttgaagc aaatcttcgt cttctttttc tttgatatta
     1741 ttttccttat catctttttt attgattttt tgcggatcta tggttttcat agcattagct
     1801 ccaccacctg atgcttcttt aatgtcgctt aaaatttctc tcatgctagg ttctttaaca
     1861 tcactatcat caactttacc atctttattt acatctttat caataaaaaa atttaatttt
     1921 tcttctatat ttgcatcatc agatattttt tcatcacttg ttttaaagcc taaattttgc
     1981 atactttgtt gaagggtact tgtattaaaa tttaatttta cactttgttg tttattattt
     2041 aaatttgaat ttaaagaacc aaaattatct tttacacttt caaaccaatt tgaaacaaat
     2101 tgatttactt cgccattaag ccttatacta ccatcatttc tagcaacata attcatataa
     2161 gaaccgaaat ttttttgtaa actactataa ttttcatcgc ttaaatttaa agctataagt
     2221 tcaccttgct tattttcaaa aacaacctta acaccatcgc tatttaaact cgaaagatct
     2281 tgcacgggaa ttttatcttg atcttctttt tttaatacgc taagctcttt tttatcaaca
     2341 ttattagtta aagaatgggt taaactagca gaagtatcga ttttcattat ttatcctttt
     2401 ttacattttg caaataaacc taaacgacac atttttctct catgtgaatt ttttaaagaa
     2461 ttacactttt taagttcttg ctcgtagtta gcacaagaat ttgcaaaagc aaaagaactc
     2521 aaaatgctta aaaccaaaat tatttttaac attttccaat ccttatttta aagatttttt
     2581 agttaaaatt atacctttta taatcgacaa aatcttaaaa aactttataa tctcagaaag
     2641 gaatcaatga aagcattagc tctttttagc ggtgggcttg atagtatgct tgcaatgaaa
     2701 ctcatcactg cacaaggcat agaagttaaa gctctaaata tcaacatagg ttttggaagc
     2761 acaagtgata aaagcgaaat catgaaaaag cgtgcggcaa tggtaggtgc agattttgaa
     2821 atgatagatg taagaaattc ctatcttcaa gaagtgcttt ttaatccaca atatggctat
     2881 ggcaaacatt ttaatccttg tatagattgt catgctttta tgtttaaaac tgctcttgct
     2941 atgttaaaag aagaaaatgc aagttttatc atcacaggag aagttttagg acaacgccct
     3001 atgagtcaaa gaagtgatgc aatggcaaag gttaaaaaac ttgctcttga tgaagaagat
     3061 ttaatcttgc gtcctatgtg tgcaaaaaac ctacctctaa ccaaacctga aagagaaggt
     3121 tgggtagata gagaaaaact cgaaggtatt attggaagaa gtcgtaaaag acaacttgaa
     3181 cttgcagcta aatttggctt agaagacttt gaaagcccag gtggaggttg tttgctaact
     3241 cttgatagtt ttgctaaaaa aattcgagat ttcatagaat ttgacaaaga tatgcaggtt
     3301 aatgacgcac aacttttaaa atatggtcgt catttaagat tacccaatgg agctaaaatg
     3361 atcataggta gaaatgaact tgaaaatact cttttaaaag gtttaaaaac tcctaaatat
     3421 gaagcaatag aaattgggga tttaatcgga gcttactctt tggtagatga aaaaatttca
     3481 gaaaaagact tagaacttgc cttaaaaata gcccttacct atactaaaca cgaagtagga
     3541 aaaagctatg aacttaaatt taaaaatcaa gcttatacaa gtatagcttt tgaaaataag
     3601 gctgatatta atcaattttt tattagttaa agtataaagt atttagcaaa acaagcgata
     3661 tagtatttga atcttttcaa aatattgcaa tcaagcccat gaaaatgggc tttttttatt
     3721 ttaatccata agcatttttt aaattgttta aattcgcact cgcattcaaa agcaaacaat
     3781 cagccaaaac taaacgtacc atagcactag ctacaacact tcctctaaca cctacacaag
     3841 gatcatgcct acctttgagt tcaaatttca aattattgcc aaatttatct atactttctt
     3901 gcttggcaaa aatagaagga gtaggtttaa aataagtttt taaaataaga ttttctccat
     3961 ttgaaattcc tcctaaaatt cctccgctat gattgcttaa aaacttgcca tcttttaaag
     4021 catcattatt acacgatccg cgcattttgc ttgcattaat accttcgcct atttcaactg
     4081 ctttaacagc attaattccc attaaagcat gagctaattt agagtctaac ttatcataaa
     4141 gaacttctcc aagtcctata agcataccac taacttttgt aaaaacagca gcgcctacgc
     4201 tatcttttga atttctagca tttaaaattt catttttaaa gtcactttct agttttggat
     4261 caaggcaaaa aatttcactt ttcttagcaa attcaaaatc aaattcttct tctttcaaat
     4321 ttgatacaaa agttcctact ccaaaaacac cactttgaac acaaatatca aattcacgca
     4381 aaagcatcgc tgcaactgca ccaccagcca ctctagcaac actttcccta gcgcttgatc
     4441 tacccccacc cctatgatct cttatgccat atttataaaa ataagtaaaa tccgcatgag
     4501 caggacgaaa tagatctttt aaattatcat aatctttaga atgagcattt tcattaaaaa
     4561 ctactatagc tatgggatga cccgttgtat atccttcaaa aaccccgctt aaaacctgag
     4621 ctttatcgct ttcttttctt ggtgttgcaa atttacttcc gcctttgcgt ttatcaagct
     4681 cattttgcaa aaattcttca tcaaatttaa ccccagcagg cattccatca ataatacatc
     4741 caacagccac accatgagac tcaccaaaac ttgtaaattt caatctcgta ccaaaggtat
     4801 tcactataaa gctcctaatt tctcaagtgc aatttttgct gccatttgct gtgcttcttt
     4861 tttgcttcct gcaatagctc ttgcaagttc tttaccatca agcattaaag caatttcaaa
     4921 ttgctttaaa tgatcagggc caaaagcacg cactgtttca tactgcggag tttgtccgat
     4981 ttttccctgt gtaatctctt gtaattttgt tttataatct tttataagaa tttttgcatc
     5041 aatttgaggg aaattttttt ctataagcct taaagcaata gtttttgcaa actcgaaccc
     5101 agcttctaaa tgtatagcac ctataatggc ttctaacgca tctgaaagta tagaaggctt
     5161 ttcttttcct ccattgtttt cctcagcaac actcataaga ataaaatcgc ccaaatttaa
     5221 actatttgca atttttgcaa aagacttttc atttactaaa gctgctctaa gcttagataa
     5281 atctccttcg gcatctttgg cgaatttatg aaaaaggtat tcacctacaa ctaaatcaag
     5341 cacggcatca cctaaaaatt ccaagcgttc gttgttgtaa gattttttaa aacttttatg
     5401 ggttaaagca tgtataagaa gatttttatc tttaaattca taagttaaac tctgctctag
     5461 cttttcaatg tttttcatca ttttcccttg caattttcaa agcagcttca cgcgccaatg
     5521 tatcacacct ttcattttcc aaatgtccat tatgtgcttt tacccaaaaa gccttaatct
     5581 tatgagattt tgccacttta atatattcct tccataaatc tatatttttt ttacctttaa
     5641 aatccttttt tatccatcct tctagccatt cattaatact ttgaaccatt aggttagaat
     5701 ctgtaaaaag cgaaatttca caaggctctt ttaaagcctt caaagattca ataattgcca
     5761 ttagctccat tctattgtta gtggtattag cctcagctcc aaaaccttcc ttttgatact
     5821 ccttataacg caaaatataa gcccatccgc caaaacctgg attattaaga catgagccat
     5881 ctgtataaat ttcaatgtgt ttcattgttt ttcacttcat aaataatttt acaagtatta
     5941 aactcataac aaacaggaca gtgataaaaa aacaaaggca ttacattttt acactcagaa
     6001 caacgatatg aaaattctaa ccccgcatta aaagaattat cttttaaaat ttttaacatt
     6061 ttaaagttag aatttttaaa aacaaactgg tgcgtatcat catgctttga aattttaccc
     6121 aaagcataaa agaattctaa aaaatcttga ttttctaaat taaacgcttc attttctcta
     6181 taaagcaaat cacaaatatc aaaaaaattt tgccctaaaa acatatgata tttttcaaaa
     6241 actaaacgcc ccaacatagg attatcttct attttaaatt ctaaaagttt tttctttttt
     6301 tcttcatcag taatattaaa agtacaaagt tctaaagctt tgataaaatc acgctctttt
     6361 tgtacatctt cattaagctc aaaaagacat tctaaaagtt ctaaattttc tttataagaa
     6421 cgaagtttta aataaacaat ttttaaaagt tttaaggctt gtatatttct tggacgcagt
     6481 tttaaagctt gtaataaaac ttcttttgca cgctctaaaa atcctgcttt aaaataaact
     6541 tttgctaaag aaaggaaaat aaattctctt tcttgtttat ctttacattt ttcaagagca
     6601 atcaaataaa tttgagttgc tttttcaaat tccccgcttt tagtaaaaat ttcagccaaa
     6661 aaacttaaat ttccaaaact caagctacta tttcttaata actctttatg agcgttatcc
     6721 atttcaaatt tttttataaa tttttcaagc ttttgttctt catctttgtt agcaaatatt
     6781 ttccaaatat aatttgcaac agctacaaca aatactaaaa tggttaaaat tataagccct
     6841 actaaagggt ctctgtattc tacaaagaaa aaatccatag tctcgctcta aaaattttat
     6901 gccaaattat agccaaatct ttgtataatt ttaacaaggt ttgtaaaatg ataactaaag
     6961 aaagtataga aaatttatcc caaagactta atattgttga tattatagaa aattatattg
     7021 aagtaaaaaa acaaggctct agttttgtat gtatctgtcc ttttcatgca gataaaaacc
     7081 cgtctatgca tatcaatcct atcaaaggtt tttatcattg ttttgcctgc aaggctggtg
     7141 gagatgcttt taaatttgta atggattatg aaaaattaag ttttgctgat gcagttgaaa
     7201 aagttgcaag ccttagtaat tttactttga gttatacaaa agaaaaacaa gaaaataaaa
     7261 aagagctaaa gtctatacta ccaagcttaa atgcgtattt taaagataat ctcaaacacc
     7321 acaaagaagt tttaacctat ctttaccaga gagctttaaa tgacaaagat atagccaaat
     7381 tcgaattagg ttttgcagga gcaagtgaag atagtataag attattgcaa aatcaaaaaa
     7441 ttcctttaga agatgctatg agtgttggag ctttaaaaaa agatgaaaat aatgaatttt
     7501 acgcaagttt tatatggcgt atcacctttc caatctacga tcataaagac ttattggtag
     7561 ggtttggagg gcgcacttta aatcccaatg taccggcaaa gtatgtaaat tcaccccaaa
     7621 atatactttt tgataaaagt agaatttttt atgcttttaa catcgctaaa gaaaatatag
     7681 ccaaaaaaaa agaaataata gtatgtgaag gctacatgga tgcaatagct tttcacaaag
     7741 cagggtttaa caatgctgta gcagttcttg gaacagcatt aaccgaacat catctaccct
     7801 taatccgccg ttatgatgca aaagtgattt tatgttttga caatgatgaa gcaggattaa
     7861 aagctgcgac acgatctgca tttttattaa gcacaaacaa aatagacggt aaagtggcaa
     7921 ttttgcaagg cggaaaagat cctgctgagc tcgtagcaaa aaatgaaagc acaaaactcc
     7981 ataatatact cgatgaagga atagagcttg gtgaatttta tatcagacgc ttaatatcca
     8041 ctcattccat aatttctgct cttgataaac aaaaagcttt agaaactata caaaaattca
     8101 cctttaatct tgaaccttta gtggcaaatt cttacactag tctagtttca aatttattaa
     8161 aagtggatga aaaatttatt gtcttatcac aaaattcaaa aaaaaccata caaacccctt
     8221 taatttctca aaataaatac aattttccta aagaaaaaat tcacattgca gaattagaac
     8281 ttatagcttt tttaaaacag catccagata tatgtaacga ttttaagcaa attagtgata
     8341 gtgtttgttt taaacataag attttattgg ataaaatttt agaaaaaaaa ggttatgaag
     8401 atagtgatat tagagaattt gaaagtaaaa atattcgaaa aaatttaaac tatagcgaat
     8461 tcttgttagg tatttgcaag gttaatttag cttttttaaa caatgtaaaa attaaaaatt
     8521 ctacactcgc attaaaaaaa caacttttta cg
//
LOCUS       DAPIVO010000067         8177 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.067, whole genome shotgun sequence.
ACCESSION   DAPIVO010000067 DAPIVO010000000
VERSION     DAPIVO010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8177)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8177)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8177
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.067"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            35..1495
                     /locus_tag="RJ239_001528"
     CDS             35..1495
                     /locus_tag="RJ239_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331633.1"
                     /translation="MHGKIAIYMDSTGRGTVTNSANTFFDFNRQIWNDKKSMPSVGML
                     VEFRTLSSEKKAEDGKLVQTSKTITGIKPSKFQEFKEGDFITEHDFWKTDNDDELEDL
                     QNSRRSAYITELYRTTDFDTIEKIPLSFTIPQAIQKYFAHEILSVETLQANLQDEKEI
                     PCILDYLILKRFLFKAYDTLIFMDNSIDQTQFSALKSIMMHLENSYKQMMADQKPNIT
                     KIFNETFLSLQCHYQALVATIDTRKNRLASLEAQMKTLQSEINLKSNATDADPEKLKA
                     RQERLAKLQKEAEYYRTTLKRLDAIREDFYKKNYNIFENAFKLSREKLFKKIVTGLNL
                     CATIMDVKIWHLSLKSSGVKNSYFTMSNIENSFCSLSFAEHYLSRLNKSALNPFDQKL
                     LVYIQKITKEQRKKFLVVTSDLDLLCKLKIENFSQNPYYLVKYAPKKVNYQSLMRDNT
                     FDIVYIDEKHVWENVADIILQGKHFDKSGKTKFKLI"
     gene            1735..2985
                     /gene="purD"
                     /locus_tag="RJ239_001529"
     CDS             1735..2985
                     /gene="purD"
                     /locus_tag="RJ239_001529"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HDV7331634.1"
                     /translation="MKIMILGSGAREYSIALALRRVDKNLEFYFAPGNGATESLGTNL
                     NLKDPVVLATYAKEKGFDLCIVGSESFLAEGVVDIFKQQGLAIFGPSKAAAMLETSKS
                     FMKSFLKKYRIKTAKFLNTNDIEKAKNFIYSLTPPIVVKADGLCAGKGVIIAKTHEEA
                     IEETAKMLSGESFGDAGKLVVIEEFLDGYELSIFAVCDGNDFVLLPAAQDHKKLLDND
                     QGPNTGGMGAYAPSSLANESLLRKVQKDIILPTLAGMKKEGAEFCGVLFIGAMIVGNK
                     PYVLEFNVRFGDPECEVLMPLIEDPLELILAATQRRLRHSKIKIKKEFAVGVVCASEN
                     YPYKSSPKSEITVNNIPENSHISYAGVSLEDGKLMADGGRVLVCVGTGKSIEEAQKNA
                     YKLCDNVNFKGKQYRKDIAHQVLK"
     gene            2982..3434
                     /locus_tag="RJ239_001530"
     CDS             2982..3434
                     /locus_tag="RJ239_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HDV7331635.1"
                     /translation="MKENLQDRLERENLKIASFGKRVLAFLIDDMVISLIVFIIFYDR
                     LIQAKDLFETTQIIGNFYLGFILLHFSYQAIFTYLYGASLGKILCKIIILDENLLDKP
                     NLIQSCIRSAIRQVSAMAFMLGFAWALSNDLRKAWEDYLARTIVVDVA"
     gene            3424..5472
                     /locus_tag="RJ239_001531"
     CDS             3424..5472
                     /locus_tag="RJ239_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HDV7331636.1"
                     /translation="MWRKFSLLLGTSIALNAAQVDIYALDAKKEGDILTANNDVVIFS
                     DFYFITANKAIYNEKTEDVELFGDVNILRGQNERSHSDYAKINLNSNQVDFSNFFFSN
                     NNLEVWFQSKTSHLNDKVFESKISAVSSCNVEDPDWEIRFSKGWLNRETNFVHLYNAR
                     LYVKNTPVFYLPYFGFSADTHRQSGLLIPKIVLKSSEGLYYEQPIYIATQENWDLELD
                     PQIRTNRGFGLYSTLRFLDSPYSTGELNFGAFRENSSYFHDENLKNQTHYGIELKYSR
                     DDLIKSLLSDNFQEGLWIDATYLNDVDYLNLGSRDYRDLNSLVTSKINYFLADENNFY
                     GAYARYYIDTSKLSNNTTLQEYPSFQYHRFLNNLFDERLRYSFDASFHNFYRPAGSYA
                     NELNLDLPISYHNAFFGDFLHFTFTERFYASFVNYSNDPERNHEHYFRNTHDFNLYTD
                     LSKAYENFFHTLNLGVNYILPGAKSGKITQDYLEEYDKENEHTSLYTVQYFYNNEGQK
                     KLKHRISLDYLNKQNEFYELENLLTYYFNENINLNSEVLYSYEQSRFTNVISQIEVNT
                     NSKFNWMFSHAYQNDEYGKYSFIGTRANYIATPNYNLFGGIWFDTQRAHANMWELGYT
                     YQRKCWNYSLMYRERIDPQLTSGGITAKNQSGVYFIFNFYPLGGVKYDFSLAESENKI
                     "
     gene            5542..7701
                     /locus_tag="RJ239_001532"
     CDS             5542..7701
                     /locus_tag="RJ239_001532"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HDV7331637.1"
                     /translation="MQYSIEINKNTEIFDIDKVAKQAAGAVLMRQGKSVVLATVAREE
                     KQVEEDFLPLTVQYIEKAYAAGKIPGGYVKRETKPSDAETLTARIIDRSLRPLFPKGY
                     AYPTQIVVMVLSADPKVDLQVMSLNAASVALYLSDIPMKAPVCGVRIGKIDGNFILNP
                     NNEELQNSTLDLYVAGVKDELLMIEMRALPDQKENEIFIEAPYADVLTQTTSQNMNEL
                     SEDEILEALNLAQKAILNGSNAYEEAFSKHKKNSQIELKNEIEHPEILAFIENNFQKQ
                     IKEAINQMAKSERASELNKIAKEILNLEIAKDWSEESVLNTLAKVKRKLIREQILNEG
                     KRADGRSLNEVRPISIETNILPNAHGSCLFTRGQTQALVVATLGGENDSQMIDLLTEK
                     NPISERFMVNYNFPGFSVGEASPIKAPGRRELGHGNLAKRALYPSVDENYPYVIRLVS
                     EILESNGSSSMATVCGGSLALKAAGVPSLKLVAGVAMGLIFEDNKYAVLTDIMGLEDH
                     DGDMDFKVAGSKDGVTALQMDIKLGGIDQEILKQALYQAKEGRIHILNIMEEAAKEII
                     VNEEVLPKLELFSVDPSKIVDIIGQAGKTIKEIVEKFGVSIDLDREKGEVKIAGSQNE
                     QIKAAKDYIINITSSQKGTKKGPKDKDISGFELGQEFQGIVKKIAPFGAFVELKNGVD
                     GLLHSSKIKHLNLSENQSLKVKISEIKNGKISVDLCE"
     gene            7698..>8177
                     /locus_tag="RJ239_001533"
     CDS             7698..>8177
                     /locus_tag="RJ239_001533"
                     /EC_number="3.2.2.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-deoxyinosine glycosylase"
                     /protein_id="HDV7331638.1"
                     /translation="MSEFLTHPFEPFFDKDSKILILGSFPSIKSRQDGFYYQHPRNRF
                     WPILETLFNAKLENITEQQAFLRKKHIALWDVLQSCKIKNSDDKTISYAKANDLNLIL
                     SQTKIQAIFTTGQSAYRFFVKFHPRLEAIALPSTSPANLNFSFEQLLQNYEIIKKFTK
                     "
BASE COUNT         3028 a         1297 c         1374 g         2478 t
ORIGIN      
        1 ctagaattta tttaagaaat ttcaaggaag aaatatgcat ggaaaaatag ctatttatat
       61 ggattctaca ggacgtggaa ccgttacaaa ctcagcaaat accttttttg actttaatcg
      121 ccaaatttgg aatgataaaa aaagtatgcc aagtgttggt atgcttgtgg aatttagaac
      181 tctttctagc gaaaaaaaag cagaagacgg caaactcgtt caaacaagca aaaccataac
      241 aggtataaaa ccttcaaaat ttcaagaatt caaagaaggg gattttatca ctgagcatga
      301 tttttggaaa actgataatg atgatgaatt agaagacttg caaaactcaa gaagaagtgc
      361 ttatataaca gaactctata gaacaacaga ctttgacact atagaaaaaa ttcctctttc
      421 ttttactata cctcaagcta tacaaaaata ttttgcccat gaaattttat ccgtagaaac
      481 gcttcaagcc aatctacaag atgaaaagga aattccttgt atacttgatt atcttatact
      541 taaaagattt ttatttaaag cttatgatac tttaattttt atggataata gcatagacca
      601 aacccaattt agcgcattaa aaagcatcat gatgcattta gagaattcgt ataagcaaat
      661 gatggctgat caaaaaccaa atatcactaa aatttttaac gaaacttttt tatctttgca
      721 gtgtcattac caagctttag tagccaccat agatacaaga aaaaatcgtc tagcctcact
      781 tgaagcacaa atgaaaactt tacaatctga aataaatctt aaaagcaatg cgaccgatgc
      841 agaccctgaa aaacttaaag cacgacaaga aagattggct aaactacaaa aagaagcaga
      901 atactacaga acaacactaa aaagacttga tgctataagg gaagattttt ataagaaaaa
      961 ttacaatatt ttcgaaaatg cttttaaact ttcacgagaa aaactcttta aaaaaattgt
     1021 cacaggttta aacctatgtg caaccataat ggatgtcaaa atttggcact tatctttaaa
     1081 atcatcaggg gttaaaaatt cttattttac tatgagtaat atagaaaatt ctttctgttc
     1141 tctttctttt gcagaacatt acttaagtcg cttaaataaa tccgctctaa atccttttga
     1201 tcaaaaactt ttagtgtata ttcaaaaaat cacaaaagaa caaagaaaaa aatttttagt
     1261 tgtcacatcg gatttagatt tattatgcaa attaaaaatt gaaaactttt cacaaaatcc
     1321 gtattattta gtaaaatacg cacctaaaaa agtaaattat caatctttaa tgcgtgataa
     1381 cacctttgat atagtctata ttgatgaaaa acatgtttgg gaaaatgttg ccgatattat
     1441 tttacaagga aagcattttg acaaatcagg aaaaaccaaa tttaaactga tttaagacat
     1501 agaaatttaa gctaaattaa gttataattt ccttgcctaa acagtttgta gtatttaaag
     1561 tgatccaaca catttttatt aactgcgatt gtgtgattta ccgtgttctg tggcatcgtt
     1621 tgagctttga aaaaagcgag aagttgcagc ctttaaaaat tacctagcgg ttttctttga
     1681 ctttttgggg tcaatctttg ttaaacggct gtttgggttt aaaaggagat ataaatgaaa
     1741 ataatgattt tgggtagtgg tgcaagagaa tattctattg ctttagcctt aagaagagta
     1801 gacaaaaatt tagagtttta ttttgctcct ggaaatggcg ctaccgaaag tcttggaaca
     1861 aatttaaacc taaaagatcc agtagtttta gcaacctatg caaaagaaaa aggttttgat
     1921 ctttgtatag taggaagtga aagtttttta gctgaagggg ttgtagatat ttttaaacaa
     1981 caaggacttg ctatttttgg gccaagtaaa gctgctgcaa tgcttgaaac ctcaaaatct
     2041 tttatgaaaa gctttcttaa aaaataccgt atcaaaacag ccaaattttt aaacacaaat
     2101 gacattgaaa aagcaaaaaa ttttatatat agtttaaccc ctcctatagt agtaaaagcc
     2161 gatggacttt gcgcaggaaa aggtgttatc atagctaaaa ctcatgaaga agccatagaa
     2221 gaaacagcta aaatgctgag cggagaaagc tttggagatg ctggaaaact cgttgtaatt
     2281 gaagaatttt tagatggtta tgaattaagc atttttgcag tatgtgatgg caatgatttt
     2341 gttttacttc ctgcagcaca agatcacaaa aaattactcg ataatgatca agggccaaat
     2401 actggtggaa tgggtgctta cgctcctagc tctttggcga atgaaagctt gcttagaaaa
     2461 gttcaaaaag atattatttt accaacttta gcaggtatga aaaaagaagg agcggaattt
     2521 tgtggtgttt tatttatagg tgctatgatc gttggaaata aaccttacgt attagaattt
     2581 aacgttcgct ttggcgatcc tgaatgtgaa gttttaatgc ctttaatcga agatccttta
     2641 gagcttattt tagctgctac tcaaagacgc ttaagacact caaaaatcaa aatcaaaaaa
     2701 gaatttgcag taggggttgt atgcgcaagt gaaaactatc cttacaaaag ttcaccaaaa
     2761 agcgaaatta ctgtaaataa cattccagaa aactctcata tttcttatgc tggagtaagc
     2821 ctagaagatg gcaaattaat ggctgatggt ggaagagttt tagtttgcgt tggcacagga
     2881 aaaagtatag aagaagcgca aaaaaatgct tataaacttt gtgataatgt aaatttcaaa
     2941 ggaaaacaat acagaaaaga catcgctcat caggttctga aatgaaagaa aatttacaag
     3001 accgcttaga gcgtgaaaat ctaaaaatag caagttttgg aaaaagagtt ctagcttttt
     3061 taatcgatga tatggttatt tctttgattg tgtttatcat tttttatgat cgtctaatcc
     3121 aagcaaaaga tttatttgaa acgactcaaa ttataggaaa tttttatctt ggcttcatct
     3181 tgcttcattt tagttatcaa gcaattttta cttatcttta tggggcaagt ttgggaaaaa
     3241 tattatgcaa aattatcatc ttggatgaaa atcttcttga caaacccaat ctcatccaaa
     3301 gttgcatcag atctgccata agacaagtta gtgctatggc gtttatgctt gggtttgctt
     3361 gggctttaag taatgattta cgcaaagctt gggaggatta tctagcaagg acaatagtag
     3421 tcgatgtggc gtaaattttc cctattgcta ggaactagca tagctttaaa tgcagcacaa
     3481 gttgatattt acgctcttga tgcaaaaaaa gaaggtgata ttcttactgc aaacaatgat
     3541 gttgttattt tttctgattt ttatttcatc actgccaata aagcaattta caatgaaaaa
     3601 accgaagatg ttgagctttt tggtgatgtt aacatcctaa ggggacaaaa cgaaagatca
     3661 cattctgatt atgctaaaat caacctaaat tccaatcaag tcgattttag taattttttc
     3721 ttttccaata acaatcttga agtatggttt caaagcaaaa caagccatct aaatgataaa
     3781 gtctttgaaa gcaaaatttc agcagtttca agctgcaatg ttgaagatcc tgattgggaa
     3841 attcgttttt caaaaggctg gcttaaccgg gaaactaatt ttgttcatct ttacaatgca
     3901 agattatatg ttaaaaatac cccagttttt tatctacctt attttggatt tagcgctgat
     3961 actcatagac aaagcgggct tttaatccca aaaatcgttt taaaaagtag cgaaggctta
     4021 tactatgaac aacctattta tatagccact caagaaaatt gggatttaga acttgatcca
     4081 caaattcgaa caaaccgtgg ttttggactt tattctactt taagatttct tgattctcca
     4141 tattcaacag gagaattaaa ttttggtgct tttagggaaa atagctccta ttttcacgat
     4201 gaaaatttga aaaatcaaac ccactatgga atagaactaa aatactcaag agatgattta
     4261 atcaaatctt tactcagtga taattttcaa gaaggtctat ggatagatgc aacctatctc
     4321 aacgatgtgg attatttaaa tttaggaagt agggattatc gagatcttaa ctcgcttgta
     4381 acctccaaaa tcaattattt tttagctgat gaaaacaatt tttacggagc ttatgcaaga
     4441 tattatatcg acacatctaa acttagcaac aatacaacct tacaagaata tccaagcttt
     4501 caatatcata gatttttaaa taaccttttt gatgaacgct tgcgttattc atttgatgct
     4561 tcatttcata atttttaccg acctgctggt tcttatgcaa atgagctaaa tttagacttg
     4621 cctatctcgt atcacaacgc tttttttgga gactttttac actttacttt tacagaaaga
     4681 ttttatgctt cttttgtaaa ttatagcaac gatcctgaaa gaaaccatga gcattatttc
     4741 agaaacactc atgattttaa tctctacacc gatctttcaa aagcttatga aaatttcttt
     4801 catactttaa atttaggggt gaattacatt ttaccaggag caaaatcagg taaaatcacg
     4861 caagattatc ttgaagaata cgacaaagaa aacgaacata caagtcttta tactgtgcaa
     4921 tatttctata acaacgaagg acaaaaaaaa ctcaaacaca gaatttcact tgactatctc
     4981 aataaacaaa atgaattcta tgaacttgaa aatcttttaa cttattattt taatgaaaac
     5041 atcaatctca acagcgaagt gctttactct tatgagcaaa gtcgctttac caatgtcatc
     5101 agccaaatag aagtcaatac aaattcaaaa tttaattgga tgttttctca tgcttatcaa
     5161 aacgatgagt atggaaaata tagctttatt ggtacaagag caaattatat tgccacacct
     5221 aattacaatt tatttggtgg aatttggttt gatactcaaa gagctcatgc aaacatgtgg
     5281 gaacttggct atacctacca aagaaaatgt tggaactatt ctttaatgta tagagaaaga
     5341 atcgatccac aactcacaag tggtggcatc acagctaaaa atcaaagcgg agtttatttt
     5401 attttcaact tctatccttt aggaggagta aaatacgatt tctctttagc agaaagtgaa
     5461 aacaaaattt aaaaaggatg aaatttgcta aatattttaa aaaattttac gaatttatta
     5521 tctggtaaaa aaggaaaaat aatgcaatac agcatagaaa ttaacaaaaa tacagaaata
     5581 tttgatatag acaaagtcgc caaacaagct gccggtgctg ttttaatgag acaaggcaaa
     5641 agcgttgttc tagctacagt tgcaagagaa gaaaaacaag ttgaagaaga ttttttacct
     5701 ctaaccgtcc aatacatcga aaaagcttat gccgcaggaa aaatccctgg tggttatgtc
     5761 aaaagagaaa ccaagccaag cgatgcagaa accttaacag cacgcattat tgatagaagc
     5821 ttacgccctc tttttccaaa aggctatgct tatccgactc aaatcgttgt gatggttctc
     5881 tcagctgatc ctaaagtaga tttacaagta atgagcttaa atgccgcaag cgtggcactt
     5941 tatcttagtg atatacctat gaaagctcca gtatgtggtg tgcgtatagg aaagatagat
     6001 ggaaatttca tactcaatcc aaacaatgaa gagcttcaaa atagcaccct agatctctat
     6061 gtagcaggtg taaaagatga gcttttgatg atagaaatga gagccttacc tgatcaaaaa
     6121 gaaaatgaaa tctttatcga agctccttat gctgatgttt taactcaaac cacttcacaa
     6181 aatatgaatg aacttagcga agatgaaatt ttagaagctc taaatttagc tcaaaaagct
     6241 atattaaatg gttcaaatgc ttatgaagaa gcctttagca aacacaaaaa aaattctcaa
     6301 atcgaactaa aaaatgagat tgaacatcct gaaattttag cttttataga aaataatttc
     6361 caaaaacaaa tcaaagaagc catcaatcaa atggcaaaaa gcgaaagagc aagcgaacta
     6421 aataaaatcg ctaaagaaat tttaaatctt gaaattgcta aagactggag tgaagaaagt
     6481 gtcttaaata ccttagctaa agtcaaacgc aaacttattc gtgagcaaat tttaaatgaa
     6541 ggcaaaagag ctgatggtag aagtttaaac gaggttcgtc ctattagtat agaaaccaac
     6601 atcttaccaa acgctcatgg ttcttgtctt ttcactcgtg gacaaactca agccctagtg
     6661 gttgcaacct taggcggaga aaacgattct caaatgatag acttgcttac agaaaaaaat
     6721 cctataagcg aacgctttat ggtaaattat aattttccag gtttttcagt aggcgaagca
     6781 agtcctatca aagctccagg aagaagagaa ctaggacatg gaaatttagc caaaagagca
     6841 ctttatccaa gtgtggatga aaactatcct tatgtaatcc gcttagttag tgaaatttta
     6901 gaaagcaatg gctcaagttc catggcaacg gtttgtggcg gatctttagc cttaaaagca
     6961 gcaggagtgc caagcttaaa acttgttgca ggagtagcca tggggcttat ctttgaagat
     7021 aacaagtatg ctgttttaac agatatcatg ggacttgaag atcatgatgg ggatatggac
     7081 tttaaagtag caggaagcaa agacggcgtt actgctcttc aaatggatat aaaactaggt
     7141 ggaatcgatc aagaaatact aaaacaagct ttataccaag ccaaagaagg aagaattcac
     7201 attctaaata tcatggaaga agccgccaaa gaaatcatag tcaatgaaga agttttacct
     7261 aaacttgagc tttttagcgt tgatccttca aaaatcgttg atatcatagg acaagccgga
     7321 aaaaccatca aagaaatcgt agaaaaattt ggcgtttcta tagacttaga tcgcgaaaaa
     7381 ggtgaagtaa aaatagcagg tagtcaaaac gagcaaatca aagccgcaaa agactacatc
     7441 ataaacatca caagctctca aaaaggaact aaaaaaggcc ctaaagacaa agatatatca
     7501 ggctttgaac ttgggcaaga atttcaaggt attgttaaaa aaatcgctcc ttttggagcc
     7561 tttgtggaac ttaaaaatgg tgttgatggt ttattgcata gttcaaaaat caagcatctt
     7621 aatttaagcg aaaaccaaag tttaaaggtg aaaatcagcg aaattaaaaa cggaaaaatt
     7681 tctgtggatt tgtgcgagtg agtgaatttt taactcatcc ttttgagcct ttttttgaca
     7741 aagattctaa aatcttaatt ttaggatctt ttccttctat taaatcaaga caagatggct
     7801 tttattatca acacccaaga aatcgttttt ggcctatact agaaacactt tttaatgcaa
     7861 aattagaaaa tatcacagaa caacaagcct ttttaagaaa aaaacatatc gctctttggg
     7921 atgtacttca aagttgcaag ataaaaaatt cagatgataa aacaataagt tatgcaaaag
     7981 ccaatgattt aaacctaatc ctttctcaaa ccaaaattca agccattttt actacaggac
     8041 aaagtgctta tagatttttt gttaaattcc accctcgctt agaagccata gccctaccct
     8101 caacttctcc tgcaaattta aatttttctt ttgaacagct tttacaaaac tatgaaataa
     8161 tcaaaaaatt tacaaaa
//
LOCUS       DAPIVO010000068         8030 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.068, whole genome shotgun sequence.
ACCESSION   DAPIVO010000068 DAPIVO010000000
VERSION     DAPIVO010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8030)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8030)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8030
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.068"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            68..454
                     /locus_tag="RJ239_001534"
     CDS             68..454
                     /locus_tag="RJ239_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HDV7331639.1"
                     /translation="MPTINQLVRKERKKVLEKSKSPALKNCPQRRGVCTRVYTTTPKK
                     PNSALRKVAKVRLTSGFEVISYIGGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGAL
                     DTAGVAKRTVSRSKYGAKRPKAGAAK"
     gene            524..994
                     /gene="rpsG"
                     /locus_tag="RJ239_001535"
     CDS             524..994
                     /gene="rpsG"
                     /locus_tag="RJ239_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HDV7331640.1"
                     /translation="MRRRKAPVREVLPDPIYGNKVITKFINSLMYDGKKSTATTIMYG
                     ALEAIDKKGGEKKGIDIFNDAIENIKPLLEVKSRRVGGATYQVPVEVRPARQQALAIR
                     WIISFARKRSERTMIDKLAAELLDAANSKGASFKKKEDTYKMAEANKAFAHYRW"
     gene            1007..3082
                     /gene="fusA"
                     /locus_tag="RJ239_001536"
     CDS             1007..3082
                     /gene="fusA"
                     /locus_tag="RJ239_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HDV7331641.1"
                     /translation="MSRSTPLKKVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVH
                     DGAATMDWMEQEKERGITITSAATTCFWKDHQINLIDTPGHVDFTIEVERSMRVLDGA
                     VAVFCSVGGVQPQSETVWRQANKYGVPRIVFVNKMDRIGANFYNVEDQIRNRLKANPV
                     PLQIPIGAEDNFKGVIDLVTMKALVWEDDTKPTDYVEKEIPAELKEKAEEYRTKMIEA
                     VSETSDELMEKYLGGEELSLEEIKTGIKAGCLSLSIVPMLCGTAFKNKGVQPLLDAVV
                     AYLPAPDEVANIKGEYEDGTEVSVKSTDDGEFAGLAFKIMTDPFVGQLTFVRVYRGCL
                     ESGSYAYNSTKDKKERIGRLLKMHSNKREEIKVLYAGEIGAVVGLKDTLTGDTLASEK
                     DKVILERMDFPDPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIIS
                     GMGELHLEIIVDRMLREFKVEAEVGQPQVAYRETIRKTVEQEYKYAKQSGGRGQYGHV
                     FLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAVDKGVQEALQNGVLAGYPVEDVKVTVY
                     DGSYHEVDSSEMAFKLAASMGFKEGARKAGAVILEPMMKVEVETPEDYMGDVIGDLNK
                     RRGQVNSMDERGGNKIITAFCPLAEMFGYSTDLRSQTQGRATYSMEFDHYDEVPKNVA
                     DEIIKKRNG"
     gene            3111..3187
                     /locus_tag="RJ239_001537"
     tRNA            3111..3187
                     /locus_tag="RJ239_001537"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3145..3147,aa:Arg,seq:cct)
     gene            3205..3354
                     /locus_tag="RJ239_001538"
     CDS             3205..3354
                     /locus_tag="RJ239_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331642.1"
                     /translation="MIKIAFFITFVISFLAAQSPVNFKEDNNITKERNIFKEQSPKRI
                     KIPTH"
     gene            3360..4061
                     /locus_tag="RJ239_001539"
     CDS             3360..4061
                     /locus_tag="RJ239_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA1(Val) (adenine(37)-N6)-methyltransferase"
                     /protein_id="HDV7331643.1"
                     /translation="MSDLITLAQLSQGYRYNSDSLILADFILKQGIKGAVFDVGAGCG
                     IIGILLKKNIANLSLSLIDIQKENIKLIEKNLKSNKIQGDIFHDDFNQFQIIKKFDFI
                     VCNPPFYRQGAYKSEDQHKAISKFQEFLPLHSFLAKTNSMLKPNGTLYFCYEALALDE
                     ICFILKDMKMKITKLCFVHTHQNKKARLVLIQVKKGSKSPCEILPPFFVYENEILSKQ
                     MQEIHLRFRLKSYDI"
     gene            4051..4425
                     /locus_tag="RJ239_001540"
     CDS             4051..4425
                     /locus_tag="RJ239_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HDV7331644.1"
                     /translation="MIFDKNFSYAFDENACEKCGGKCCTGESGNIFASKEELEALRKH
                     LNLESKEFAEKYLRKVGFKMSFKEVECEDGFACIFFDTQKRNCSIYDFRPKQCRTFPF
                     WEYFKTHQKELEKECIGICYLS"
     gene            4398..5675
                     /locus_tag="RJ239_001541"
     CDS             4398..5675
                     /locus_tag="RJ239_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent nuclease subunit B"
                     /protein_id="HDV7331645.1"
                     /translation="MYRYLLFVLAAFFLAACGSSKINVVYPDYTKYKSNDFDLRVMKA
                     YNYEYYKQYKEARDEFLSLYQDYNNTNFLENAFLLSLANNLDKQAELDNLAKPYLNQN
                     DNLKRLSALYALNSNDINNAQKLMKELLTKKDSDPRNLELYGDILVKKNDLKNATKYY
                     RSAYNQVQNEEILFKLIGIYAILNDTLNIKNVLEFSRKTNGCTLKTCVLLAKIYFDEK
                     NIEALKSIYKELYQLTKNKSFVLALVELLNSQGKTEEALKISLQYDLDDDIKLALYQN
                     LKRFDDAKKMSLALYHKTKNKEYLLRAAVFEFEAANEAKKITPKVIDSVKEKFEQAID
                     KDSNALYLNYYGYLLIDYDLDVKKGIELVKLALEKDPQNLYYLDSLAWGYYKLGDCKQ
                     AWEILKQTLDDKEFANSDESKAHIKAIKACIKP"
     gene            5672..6448
                     /gene="trpC"
                     /locus_tag="RJ239_001542"
     CDS             5672..6448
                     /gene="trpC"
                     /locus_tag="RJ239_001542"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HDV7331646.1"
                     /translation="MILDKIFEKTKEDLKERKLKLPYDMLGRSLASNPFFPKDVIKAL
                     KRVEKEVKIIAEVKKASPSKGVIREDFDPLSIALNYEKNKAAAISVLTEPHFFKGSLE
                     YLSLIRRYTQIPLLRKDFIFDEYQILEALVYGADFVLLIAKMLSMKELKKLLEFARHL
                     GLEALVEIHDKEDLSKAIFAGADIIGINHRNLEDFTMDMSLCEKLIPQIPNSKIIIAE
                     SGLENKEFLEHLQNLGVDAFLIGEYFMREKDEGKALKALL"
     gene            6458..6943
                     /locus_tag="RJ239_001543"
     CDS             6458..6943
                     /locus_tag="RJ239_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HDV7331647.1"
                     /translation="MQYLYAPWRSEYFEKVKSICPFCDCANKIKSDEELGVIFRAKHC
                     FGVMNRYPYSAGHFMVIPYIHEEHIENLSDEIWQEMSYFVRLGVKILKEQIHANGVNI
                     GMNLSKDAGAGIAFHCHYHLVPRWSGDTNFITTIGETRVCGTNIEQVYQKLVLAFKNA
                     Q"
     gene            6933..7931
                     /gene="mnmH"
                     /locus_tag="RJ239_001544"
     CDS             6933..7931
                     /gene="mnmH"
                     /locus_tag="RJ239_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HDV7331648.1"
                     /translation="MLSEVEFVEFQKENFSLLIDARSPREFLHSHLIGALNFYALNDE
                     EYQEIGTIYKKNQALAKAMGASYICQNTTKHILEITQNFRIGEKVGIYCSRGGLRSKS
                     IAVILSELGFRVVRLKGGFKAYRTFVTHYFENEINFDFFALCGNTGCGKTELLEQLPQ
                     AINLEKMANHLGSSFGDILGKQPTQKAFEAELFHNIQNLENFAFIESESRKIGDIILP
                     LKFYEKMQKAFKIYCFCSLENRVRRIQKIYQEKMTPLKFQQCVQKISPYISLNLRQDL
                     LQSYERKEWQKLIVMLLEYYDKTYKKPDKIDLELNTDDILKAKEELLDHFKVQLLF"
BASE COUNT         2871 a         1044 c         1551 g         2564 t
ORIGIN      
        1 tatatttttg taagtaaatt ttagatatca tccaaagttt attacatttt taaagaaagg
       61 aattattgtg cctaccataa atcaattggt tagaaaagag cgcaaaaaag ttttagaaaa
      121 atctaaatct ccagcgctta aaaattgtcc acaaagaagg ggagtttgca ctagggttta
      181 tactacaaca cctaaaaaac caaactcagc gttaagaaaa gttgccaaag taagacttac
      241 tagtggcttt gaagtgatca gctatatcgg cggtgaaggt cataacttgc aagaacacag
      301 cattgtttta gtgcgtggtg gtagggtaaa agacttacca ggggttaaat atcacatcgt
      361 tcgtggtgct cttgatacag caggtgttgc aaaaagaaca gtttctcgtt ctaaatatgg
      421 tgctaaacgt cctaaagcag gcgctgcaaa ataatcattc atacagacaa atccgttaga
      481 tttgattttg tttgagtaaa atttaaaatt tgaaggaaaa ataatgagaa gaagaaaagc
      541 tccggtaaga gaagtcttgc ctgatccgat ttatggtaat aaagtaatca caaaatttat
      601 taattcttta atgtatgatg gtaaaaaaag cacagctaca acaattatgt atggtgcttt
      661 ggaagctatt gataaaaaag gtggcgagaa aaaaggtatt gatattttta atgatgcgat
      721 tgaaaatatt aagcctttat tagaagtaaa atctcgtcgt gtaggtggtg caacttatca
      781 agttccagtt gaagttcgtc ctgctagaca acaagctttg gcgattcgtt ggattatttc
      841 ttttgcaaga aaaagaagcg aaagaactat gattgataaa cttgcagctg agcttttaga
      901 tgcagcaaat agcaaaggtg cttcatttaa gaagaaagaa gatacttata aaatggctga
      961 agcaaataaa gcatttgctc actatcgttg gtaagaagga gtgtgtatgt caagaagtac
     1021 tcctttaaaa aaagttagaa atatcggtat tgctgctcac attgatgcgg gtaaaacgac
     1081 tacatctgaa agaattcttt tctttacagg tatgagtcat aaaatcggtg aagttcatga
     1141 tggtgctgca actatggact ggatggaaca agagaaagag cgcgggatta ctatcacttc
     1201 tgcggctaca acttgttttt ggaaagatca tcaaatcaat cttattgaca ctccaggcca
     1261 cgtggatttt acaattgaag ttgaaagatc tatgcgtgtt cttgatggtg ctgttgcggt
     1321 attttgttca gtgggtgggg tgcagcctca aagtgaaaca gtttggagac aagcaaataa
     1381 atatggtgtt ccaagaatag tatttgtaaa caaaatggat agaatcggtg caaatttcta
     1441 caatgtagaa gatcaaattc gcaaccgttt aaaagctaat ccagttccac ttcaaattcc
     1501 aatcggtgct gaggataatt ttaaaggcgt aatcgatctt gtaactatga aagctttagt
     1561 ttgggaagat gatactaagc caacggatta tgtagaaaaa gaaattccag ctgaacttaa
     1621 agaaaaggca gaagaatatc gcacaaaaat gatagaagca gtttctgaaa cttcagatga
     1681 gttgatggaa aaatatttag gcggagaaga attaagcctt gaagagatta aaacagggat
     1741 taaagcagga tgtttaagtc tttctatcgt tcctatgctt tgcggtacag cgtttaaaaa
     1801 taaaggggtt caacctttac ttgatgctgt tgtggcttat ttaccagctc ctgatgaagt
     1861 ggcaaatatc aagggtgaat atgaagatgg cacagaagtt tctgtaaaat caactgatga
     1921 tggcgagttt gcaggacttg catttaaaat tatgacagat ccatttgtag gacaacttac
     1981 tttcgtgcgt gtttatcgcg gttgtttaga aagtggttct tatgcttata actcaactaa
     2041 agataaaaaa gaaagaattg gtcgtttgtt aaaaatgcac tctaacaaaa gagaagagat
     2101 taaagtgctt tacgcaggcg aaattggtgc tgttgtagga cttaaagata ctttaacagg
     2161 ggatactctt gcaagtgaaa aagataaggt aatccttgaa agaatggatt ttccagatcc
     2221 agttatttct gttgcagttg agccaaaaac taaagcagat caagaaaaaa tgtctattgc
     2281 tttaaataaa ttagcacaag aagatccaag ttttagagtt tctacagatg aagaaagtgg
     2341 ccaaactatc atttcaggta tgggtgagtt gcaccttgaa attatcgttg atagaatgct
     2401 tcgtgaattt aaagttgaag ctgaagtagg tcaaccacaa gttgcttatc gcgaaactat
     2461 tagaaaaact gttgaacaag aatacaaata cgctaaacaa tcaggtggtc gtggtcagta
     2521 tggacatgta ttcttacgcc ttgaaccact tgagccaggt agtggatatg aatttgttaa
     2581 tgatatcaaa ggtggagtaa ttccaaaaga atacattcct gcagttgata aaggtgttca
     2641 agaagcatta caaaatggtg ttttagcagg ttatcctgtg gaagatgtta aagtaactgt
     2701 ttatgatgga agttatcacg aggtggattc atctgagatg gcgtttaaac ttgctgcttc
     2761 tatgggcttt aaagaaggtg ctagaaaagc aggtgctgtg atcttagagc ctatgatgaa
     2821 agttgaagta gaaactcccg aagattatat gggtgatgtt attggagatc ttaacaaacg
     2881 ccgtggtcaa gtaaatagca tggatgagcg tggtggaaat aaaatcatca cagcattttg
     2941 tcctttggct gaaatgtttg gttattctac tgatcttaga agtcaaactc aaggtcgtgc
     3001 gacttattct atggaatttg atcactatga tgaagttcct aaaaatgttg cagatgaaat
     3061 catcaaaaaa agaaacggtt aaatttttag cgggattttt cccgctttct gtcctcgtag
     3121 ctcagcagga tagagcgcaa aattcctaat tttgaggccg tgagttcgaa tctcgccgtg
     3181 gacaccattt tatggggtgt tattatgata aaaattgctt tttttataac ttttgtaatt
     3241 tcttttttgg cagcacaaag cccagtaaat tttaaagaag ataataatat aacaaaagaa
     3301 cgaaatatat ttaaagaaca atctccaaaa cgcattaaaa ttccaacgca ttaaaatata
     3361 tgtcagatct gattacgcta gcacaattat cacaagggta tcgttacaat agtgattctt
     3421 taattttagc tgattttatt ttaaaacaag gaattaaagg cgctgttttt gatgtaggtg
     3481 cgggctgtgg tatcataggt attttactta aaaaaaatat tgcaaattta agtttatctt
     3541 tgattgatat tcaaaaagaa aatataaaat tgattgaaaa aaatttaaaa tccaacaaaa
     3601 tacaaggcga tatttttcat gatgatttta atcaatttca aatcataaaa aaatttgact
     3661 tcatagtctg caatcctcca ttttatagac aaggagctta caagagtgaa gatcagcata
     3721 aagctataag taaatttcag gaatttttac ccttgcatag ctttttagct aaaacaaatt
     3781 ctatgcttaa gccaaatggt actttgtatt tttgctatga agctttagct ttagatgaaa
     3841 tttgttttat tttaaaagat atgaaaatga aaataacaaa gctttgcttt gtacatacac
     3901 atcaaaacaa aaaagcaaga cttgttttga tacaggtaaa aaaaggttca aaatcgcctt
     3961 gtgagatttt acctcctttt tttgtatatg aaaatgaaat tttaagcaaa caaatgcaag
     4021 aaattcactt aagatttagg ttaaaaagtt atgatatttg ataaaaattt ttcttatgct
     4081 tttgatgaaa atgcttgtga gaaatgcggt ggaaagtgtt gcactggaga aagtggcaat
     4141 atttttgcga gcaaggaaga attagaagca ttaagaaagc atttaaattt agaaagcaaa
     4201 gaatttgctg aaaaatactt gagaaaagtg ggctttaaaa tgagttttaa ggaggtcgaa
     4261 tgtgaagatg gctttgcttg catttttttt gatactcaaa aaagaaattg tagtatctac
     4321 gattttcgtc caaaacaatg cagaactttt ccattttggg aatattttaa aacacatcaa
     4381 aaggaattag aaaaagaatg tataggtatt tgttatttgt cttagcagcc ttttttttgg
     4441 cagcttgtgg aagttcaaaa atcaatgttg tttatcctga ttatacaaaa tataaaagca
     4501 atgattttga tttaagggtt atgaaggctt ataattatga gtattataaa caatacaaag
     4561 aagccagaga tgaattttta agtctttatc aagattataa taatactaat tttttagaaa
     4621 atgcattttt actttcttta gcaaacaatc ttgacaagca agcagagtta gataatctag
     4681 caaagcctta tttaaatcaa aatgacaatc ttaagcgact tagtgctctt tatgctttaa
     4741 attcaaatga tatcaacaat gctcaaaaac ttatgaaaga gcttttaaca aaaaaggata
     4801 gtgatcctag aaatttagag ctttacggag atattttggt taaaaaaaat gatttaaaaa
     4861 atgctacaaa atactataga tctgcttata atcaagtgca aaatgaagaa attttattta
     4921 aactcatagg aatttatgcg attttgaatg atactttaaa tattaaaaat gttttagaat
     4981 tttcaagaaa aaccaatggt tgtactctca aaacttgcgt cttgcttgct aaaatttatt
     5041 ttgatgaaaa aaatatcgaa gctttaaaaa gtatatataa agagctttat caacttacca
     5101 aaaataaaag ttttgtattg gctttagttg agcttttaaa ttctcaaggc aaaacagaag
     5161 aagctttaaa aatttctttg cagtatgatt tagatgatga cattaaactc gctttgtatc
     5221 agaatttaaa acgctttgat gatgctaaaa aaatgagttt agctctttat cataaaacaa
     5281 aaaataaaga atatcttcta cgagcggcag tttttgaatt tgaagctgca aatgaagcta
     5341 aaaaaatcac tccaaaagta attgattctg taaaagaaaa attcgaacag gctatcgata
     5401 aagatagcaa tgctttgtat ttaaactact atggatattt gcttatagat tatgatttag
     5461 atgttaaaaa aggtatagag cttgtgaaac ttgccttaga aaaagatcca cagaatttgt
     5521 attatttaga ttctttagct tgggggtatt ataaactagg cgattgtaag caagcatggg
     5581 aaattttaaa acaaacatta gatgataaag aatttgcaaa ttctgatgag agcaaagctc
     5641 atataaaagc gataaaggcg tgtataaaac catgatattg gataaaattt ttgaaaaaac
     5701 aaaagaagat ttaaaagaac gcaaactaaa acttccttat gatatgttag ggcgttcttt
     5761 agcttcaaat cctttctttc caaaagatgt gattaaggct ttaaaaagag tagaaaaaga
     5821 agttaaaatc atagcagaag taaaaaaagc aagccctagc aagggagtca ttagagaaga
     5881 ctttgatcct ttgagtatcg ctttaaatta tgagaagaac aaagctgcgg cgatttctgt
     5941 tttaactgag ccgcattttt ttaaaggttc tttagaatac ttaagtctta tacgccgtta
     6001 tacgcaaatt cctttactta gaaaagattt tatctttgat gagtatcaaa ttttagaagc
     6061 tttggtttat ggggcggatt ttgtattatt aatcgctaaa atgctaagca tgaaagagct
     6121 taaaaaactg cttgagtttg caagacattt aggtcttgag gctttggttg aaatccatga
     6181 taaagaggat ttgagtaagg ctatttttgc tggagcggat attatcggta tcaatcatcg
     6241 taatttagag gattttacta tggatatgag tttgtgcgaa aaacttatcc cacaaatccc
     6301 aaattcaaaa atcatcatcg cagaaagtgg tttagaaaat aaagaatttt tagagcattt
     6361 gcaaaattta ggcgttgatg cttttttaat cggcgaatat tttatgcgcg aaaaagatga
     6421 aggaaaggct ttaaaagctt tgctttaagg agggaaaatg cagtatttgt atgcaccatg
     6481 gcggagtgag tattttgaaa aagtaaaaag catttgtcca ttttgtgatt gtgctaataa
     6541 gatcaaaagc gatgaagaat taggcgtgat ttttagagca aagcattgtt ttggagtgat
     6601 gaaccgctat ccttattctg cagggcattt tatggtgatt ccttatatac atgaagagca
     6661 tatagaaaat ttaagtgatg aaatttggca agaaatgagt tattttgtgc gtttgggggt
     6721 aaaaatttta aaagagcaaa ttcatgcaaa tggagtgaat atcggtatga atttaagcaa
     6781 ggatgcagga gctggcatag cttttcattg tcattatcat ctagtaccac gctggtcagg
     6841 agatacaaat tttatcacaa ccataggaga aactagggtt tgtggcacta atatagagca
     6901 agtttatcaa aaacttgttt tggcttttaa aaatgctcag tgaagttgaa tttgtagagt
     6961 ttcaaaaaga aaatttctct cttttaatcg atgcaagaag ccctagagaa tttttgcatt
     7021 ctcacttgat aggagcttta aatttttatg cactcaatga tgaagaatat caagaaatag
     7081 gaacaattta taagaaaaat caagctttag ctaaggctat gggtgcgagt tatatttgtc
     7141 aaaataccac taagcatata ttagaaatca ctcaaaattt tcgcatagga gaaaaggtgg
     7201 ggatttattg ttctcgtggg ggtttgcgtt caaagtctat cgcagtgatt ttaagtgagc
     7261 ttggctttag ggtggtgcgt ttaaaaggtg ggtttaaagc ttatagaact tttgtaacgc
     7321 attatttcga aaatgaaata aattttgatt tttttgctct ttgtggtaat acaggttgtg
     7381 gaaaaacaga gcttttagaa caactcccac aagctataaa tttagaaaaa atggcaaatc
     7441 atttaggctc gtcttttggt gatattttag gaaaacaacc tacgcaaaaa gcttttgaag
     7501 cagaactttt tcacaatatt caaaatttag aaaattttgc tttcatagaa agcgaaagtc
     7561 gcaaaatagg ggatattatc ttacctttga aattttatga aaaaatgcaa aaggctttta
     7621 aaatttattg tttttgttct ttggaaaatc gcgttagaag aatacaaaaa atttatcaag
     7681 aaaaaatgac tcctttgaaa tttcaacaat gtgtgcaaaa aatcagtcct tatatcagct
     7741 taaatttacg ccaagatttg cttcaaagtt atgagagaaa agaatggcaa aagcttattg
     7801 ttatgctttt ggagtattat gataaaactt ataaaaaacc agataagatt gatcttgagt
     7861 taaatactga tgatatttta aaagctaaag aagagctttt agatcatttt aaagtacaat
     7921 tactttttta atatcagata attttattaa ataatcaaat tttttcttca tcatcttgta
     7981 ataatccttt ttatctttgt tgttttttaa cttggctcaa atttttattt
//
LOCUS       DAPIVO010000069         7858 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.069, whole genome shotgun sequence.
ACCESSION   DAPIVO010000069 DAPIVO010000000
VERSION     DAPIVO010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7858)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7858)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7858
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.069"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            72..494
                     /gene="cgb"
                     /locus_tag="RJ239_001545"
     CDS             72..494
                     /gene="cgb"
                     /locus_tag="RJ239_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-domain globin Cgb"
                     /protein_id="HDV7331649.1"
                     /translation="MTKEQIQIIKDCVPILQKNGEDLTNEFYKIMFNDYPEVKPMFNM
                     EKQISGEQPKALAMAILMAAKNIENLENMRSFVDKVAITHVNLGVKEEHYPIVGACLL
                     KAIKNLLNPDEATLKAWEVAYGKIAKFYIDIEKKLYDK"
     gene            complement(514..2145)
                     /locus_tag="RJ239_001546"
     CDS             complement(514..2145)
                     /locus_tag="RJ239_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug ABC transporter permease/ATP-binding
                     protein"
                     /protein_id="HDV7331650.1"
                     /translation="MPFIMELLKQNKLKLISFLLFSFITSAVGVLTLVFINDYLLKNA
                     QNIPIFYFIVLLLIFFISSTIVELGLSIFGQNFIFKMQRRVVKQILDTPLLRVAKVGK
                     ARILASLGSDVRNISFGLLRLPDFLQSSILILCTSVYLCYLSPQIFALCVVWIMVIFI
                     TNNFLMMKVYQYFRKARENDDALQNNYQNILDGHKELLINRDRAKLYYEDEFENNARL
                     KKKNSTLGNLFNNLSNNWTNVTLLALVGVEFYLALKFEWASVADATTIALSILFLRTP
                     LVSMIGSFPTLLLAKIALDKIAKLELDDYIEGFKKTHYISEWKKISFRNTQFAYEENF
                     HLNPVNIELKKGELVFLIGKNGSGKSTFCMLLTGLFKPSKGGIYVDDTLIDDKNLDEY
                     RSLISAVFSDFHLFTKTLNKENFASEEKIAFWLEFLELKNKTSVKDNELTLTKLSTGQ
                     KKRLAMLIALLEERDILVLDEWAADQDPVFRRFFYKKLLPLLKEQGKTIFAITHDDAY
                     FDSADRIFLAQNGEISELKGENIKELAKNLVEKFD"
     gene            complement(2195..3490)
                     /locus_tag="RJ239_001547"
     CDS             complement(2195..3490)
                     /locus_tag="RJ239_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7331651.1"
                     /translation="MRKSKFGTKEIKILGLSSLGGTLEFYDFIIFVFFAEYIANVFFP
                     KDMSEFWALLNTYGAFAAGYLARPLGGIVMAHFGDKFGRKNMFMLSILLMVLPTFVLA
                     FIPGYETLGFLAPVLLILIRIFQGIAIGGELPGAWVFVREYCQEKQKAFFLSCLNSAM
                     ALGILLGSIVFLIINAFFSIEEIAAYAWRIAFFVGGIFGIISIYLRRFLQETPVFKQM
                     KKESSLSSFPLKDLFKEKDIVKNLFSSMMMTWVLTGCVIVLVLLMPKFMPSILNLSGV
                     EGSYLQILGILGIALGGAFMGYLVDKFGLFKICIFFSLTFVFFSFLYFYALYELKNLV
                     LVCILYSIICFLGGINVFAPILMSEVFRAKIRFSGISFSYNISYAISGGITPQLVFWL
                     NTLASKNENPFLYGMSIYMIFLALLAICAVFIVKDKIKF"
     gene            3577..4374
                     /locus_tag="RJ239_001548"
     CDS             3577..4374
                     /locus_tag="RJ239_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDV7331652.1"
                     /translation="MFNFITTLLKTNLYFLEEKTTSKNSNQTHIISLKQSDDEFLNLL
                     FSFLVPQSDEDKNFIEKTRTKIKRNEHNIVLIKNPNFNALIDTGFLDTIDTLKEKLHI
                     HKTDFKDITHIILTHAHPDHIGALMSEENLFPKAQILIDKKEYDFWIKSDRQEIKNTL
                     LKLKNIEFIDHSKDLIFQNSGIKAIPAYGHTPGQNAIIIDDKIVFWGDLLHLYDIQIP
                     KPKIAIKFDIDQNEAIQTREKLLKEFKERKLKVIGTHVPFIKPKFLD"
     gene            4462..4680
                     /gene="infA"
                     /locus_tag="RJ239_001549"
     CDS             4462..4680
                     /gene="infA"
                     /locus_tag="RJ239_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HDV7331653.1"
                     /translation="MAKDDVIEIDGTVLEALPNANFKVELDNKHVILCHIAGKMRMHY
                     IRIMPGDKVKVELTPYSLDKGRITFRYK"
     gene            4852..4965
                     /gene="rpmJ"
                     /locus_tag="RJ239_001550"
     CDS             4852..4965
                     /gene="rpmJ"
                     /locus_tag="RJ239_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003720928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HDV7331654.1"
                     /translation="MKVRPSVKKMCDKCKVVRRKGVVRIICENPKHKQRQG"
     gene            4968..5333
                     /gene="rpsM"
                     /locus_tag="RJ239_001551"
     CDS             4968..5333
                     /gene="rpsM"
                     /locus_tag="RJ239_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HDV7331655.1"
                     /translation="MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYDKR
                     VHELSEDEAAAIRKEIQENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQK
                     TKTNARTRKGKRKTVGAKS"
     gene            5343..5735
                     /gene="rpsK"
                     /locus_tag="RJ239_001552"
     CDS             5343..5735
                     /gene="rpsK"
                     /locus_tag="RJ239_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HDV7331656.1"
                     /translation="MAKRKIVKKKVVKKNIAKGIVYISATFNNTMVTVTDEMGNAIAW
                     SSAGGLGFKGSKKSTPYAAQQAVEDALNKAKEHGIKEVGIKVQGPGSGRETAVKSVGA
                     MEGIKVTFLKDITPLAHNGCRPPKRRRV"
     gene            5763..6389
                     /gene="rpsD"
                     /locus_tag="RJ239_001553"
     CDS             5763..6389
                     /gene="rpsD"
                     /locus_tag="RJ239_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HDV7331657.1"
                     /translation="MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHG
                     ARKGKISEYGLQLREKQKAKFMYGVSEKQFRRLFAEAARREGNTGVLLIQLLEQRLDN
                     IVYRMGFATTRRFARQLVTHGHVLVNGKRVDIPSFRVEAGAKIEIIEKSKNNPQITRA
                     IELTAQTGIVAWVDVEKDKRFGIFTRKPEREEVVIPVEERFIVELYSK"
     gene            6402..7415
                     /locus_tag="RJ239_001554"
     CDS             6402..7415
                     /locus_tag="RJ239_001554"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HDV7331658.1"
                     /translation="MRNITTSAYTPTEFTIENISDTVAKISAWPFEIGYGITLAHPLR
                     RLLYTSTIGYAPTAIHIDGVAHEFDSMRGMLEDVALFIINLKKLRFKIKGDSNKEIVE
                     FSFKGSKEIYGKDLNNDQVEVVNKDAYLATINEDAELKFTLIVEKGIGYVPSEEIKEL
                     INDPKFIALDAFFTPVREATYDIEKVLFEDNPDYEKVVLTVTTDGQITPNEAFQNALE
                     AMYKQLSVFDKITNVRSVIKNQATSNELENTKLLQNITDLNLSARSYNCLEKAGVVYI
                     GELALMSVSELAGLKNLGKKSLDEIKNIMESIGFPVGTSKLSDNKEILKNKIAELKAQ
                     NEG"
     gene            7419..7772
                     /gene="rplQ"
                     /locus_tag="RJ239_001555"
     CDS             7419..7772
                     /gene="rplQ"
                     /locus_tag="RJ239_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HDV7331659.1"
                     /translation="MRHKHGYRKLGRTSSHRAALLKNLTIALVNSGKIETTLPKAKEL
                     RGYVERLITRARLGDFNAHRAVFASLQDKNATNKLVTEIAPKFKDRNGGYTRIIKTRI
                     RRGDAAEMAFIEFVA"
BASE COUNT         3161 a         1204 c         1160 g         2333 t
ORIGIN      
        1 tttaacacaa gtcaattttt ttctcctttt taagatataa aatatctctt ttacaacaaa
       61 aaggagaaac tatgacaaaa gaacaaattc aaatcatcaa agattgtgtg cctattttgc
      121 aaaaaaatgg agaggattta accaatgagt tttataaaat aatgttcaat gattatcctg
      181 aggtaaaacc tatgtttaat atggaaaaac aaatttcagg agaacaacca aaagctttag
      241 caatggcgat tttaatggcg gctaaaaata tagaaaattt ggaaaatatg agaagctttg
      301 ttgataaagt tgccataact catgttaatt taggagttaa agaagagcat tatcctatag
      361 ttggagcttg ccttttaaag gctattaaaa atcttttaaa tcctgatgaa gccactctta
      421 aagcttggga agttgcttat ggaaaaattg ctaaatttta tatcgatata gaaaaaaagc
      481 tctatgataa ataatataag cccattttgg gctttaatca aatttttcta ctaaattttt
      541 agctaattcc tttatattct caccctttaa ttcgctgatt tcaccatttt gagccaagaa
      601 aattctatca gcactatcaa aatatgcatc atcatgtgtg atagcaaaga ttgttttacc
      661 ttgctctttt agcaaaggta aaagtttttt ataaaaaaat cttctaaaaa caggatcttg
      721 atcagccgcc cattcatcaa gcactaaaat atccctttct tcaagcaagg ctataagcat
      781 agctaaacgc tttttttgcc ctgtagaaag tttggttaag gtcagttcat tatctttgac
      841 acttgtttta tttttaagtt ctaaaaactc caaccaaaaa gcaatttttt cttcgcttgc
      901 aaaattttct ttatttaagg ttttagtaaa aagatgaaaa tcgctaaaaa cagcagaaat
      961 aagagatcta tactcatcta aatttttatc atctataagc gtatcatcaa cataaattcc
     1021 gcctttgctt ggcttaaaaa gtcctgtcaa aagcatacaa aaagtggatt taccacttcc
     1081 atttttacct attaaaaata ccaattcacc ttttttaagt tctatattta caggatttaa
     1141 atgaaaattt tcttcataag caaattgagt atttctaaaa gaaatttttt tccattcact
     1201 gatataatgt gtttttttaa aaccttctat ataatcatct aattccaatt ttgcgatctt
     1261 atccaaagcg atttttgcca aaagcaaagt aggaaaagat cctatcatag atactaaagg
     1321 ggttcgtaaa aacaaaatag aaagagctat agttgtagca tctgcaacac ttgcccattc
     1381 aaattttaaa gctaagtaaa actctacacc cactaaagcc aaaagagtta catttgtcca
     1441 gttgtttgag agattgttaa aaagattacc taaagtacta tttttctttt tcaatcttgc
     1501 attattttca aattcatctt cataataaag cttggctcta tcacgattga tcaaaagttc
     1561 tttatgtcca tctagtatat tttggtaatt attttgcaaa gcatcatcat tttcccttgc
     1621 ctttctaaaa tactgatata ctttcatcat caaaaaatta ttagtaataa aaataaccat
     1681 aatccatacc acacacaaag caaaaatttg tggtgaaaga taacataaat aaacactagt
     1741 gcataaaatc aatatacttg attgtaaaaa atcaggcaat cttaaaagcc caaaagatat
     1801 atttctcaca tcacttccca aagaagctaa aattctagcc ttacctactt tagcgactct
     1861 taacaaaggg gtgtctaaga tctgctttac tacgcgcctt tgcattttaa aaataaaatt
     1921 ttgtccaaaa atactaagtc caagttcaac tatggtagaa cttataaaaa aaatcaaaag
     1981 caaaacaata aaataaaaaa taggaatgtt ttgtgcattt ttaagcaaat aatcattgat
     2041 aaaaacaaga gttaaaactc caacagcgct tgtaataaaa gaaaaaagca aaaaagaaat
     2101 caactttaat ttattttgct taagtaattc cataataaaa ggcatttata aactccaaaa
     2161 tataatttta attataacat tttaagagtg attatcaaaa ttttatttta tcttttacta
     2221 taaaaacagc acaaatagcc aataacgcta aaaaaatcat atatatactc ataccatata
     2281 aaaatggatt ttcattttta ctcgcaagtg tattaagcca aaaaacgagt tgcggagtaa
     2341 taccgcctga aattgcataa gaaatattat aagaaaaaga aattcctgaa aatcttattt
     2401 tagctctaaa aacttcactc attaaaatag gtgcgaacac attaatccca cctaaaaaac
     2461 aaataatcga atacaaaata cacaccaaaa ccaaattttt aagctcatat aaagcataaa
     2521 aatataaaaa agaaaaaaat acaaaagtta aagaaaagaa aatgcaaatt ttaaataaac
     2581 caaatttatc tacaagataa cccataaaag ccccgcctaa agctattccc aaaattccta
     2641 atatctgtaa ataacttcct tcaaccccac ttaaatttaa aatactaggc ataaatttag
     2701 gcatcaataa aacaagcaca ataacacaac ctgttaaaac ccaagtcatc atcattgatg
     2761 aaaataaatt ttttacaata tccttttctt taaataaatc tttaagcgga aaagaactaa
     2821 gcgatgattc ttttttcatt tgtttaaaaa caggagtttc ttgcaaaaat ctacgcaaat
     2881 aaatagaaat aatcccaaaa attccaccta caaaaaaagc aatacgccaa gcataagcag
     2941 caatttcttc tatgctaaaa aaagcattaa tgattaaaaa tactatactt cctaacaaaa
     3001 ttcctaaagc catagctgaa tttaaacagc ttaaaaagaa agctttttgt ttttcttgac
     3061 aatactctct tacaaaaacc caagctccag gcaattctcc acctatagct atgccttgaa
     3121 aaattcttat aagtatcaat aaaacaggag ctaaaaaccc aagagtttca taacctggaa
     3181 taaaagctaa gacaaaggta ggaagaacca ttagtaaaat acttagcata aacatatttt
     3241 tacgcccaaa tttatctcca aaatgtgcca taactatacc acccaaagga cgtgctaaat
     3301 atccagctgc aaatgctcca taagtattta ataaagccca aaattcactc atatctttag
     3361 gaaaaaatac attggctata tattcagcaa aaaagacaaa aataataaaa tcataaaatt
     3421 ctaaagttcc tcctagtgaa gaaagtccta agatcttaat ttcctttgtt ccaaattttg
     3481 attttctcat tgattaatta ccttaaattt taaaaacatt gtttttatta tactataatc
     3541 atttccaaaa tattatctaa aaatttaagg ataaatatgt ttaattttat aaccactctt
     3601 ttaaaaacca atctttattt tttagaagaa aaaaccacaa gcaaaaattc aaatcaaacc
     3661 catataatct cacttaaaca gtctgatgat gaatttttaa atttattatt ttctttttta
     3721 gtgccacaaa gcgatgaaga taagaatttt atagaaaaaa ctcgcacaaa aatcaaaaga
     3781 aatgagcata atattgttct gataaaaaat ccaaatttta atgctttaat agacacaggg
     3841 tttttagata ctattgacac attaaaagaa aaattacata tccataaaac cgattttaaa
     3901 gatatcactc atattatctt aacacacgca catcctgatc atataggtgc tttaatgagc
     3961 gaagaaaatc tttttccaaa agctcaaatt ttaattgata aaaaagaata tgatttttgg
     4021 atcaaaagcg atagacaaga aattaaaaac accttgctta aacttaaaaa tatagaattt
     4081 atcgatcatt ccaaagattt gatctttcaa aattcaggca ttaaagccat acctgcttac
     4141 gggcataccc caggtcaaaa tgctatcata attgatgata aaatagtctt ttggggagat
     4201 ttacttcatc tttatgatat acaaatccca aaacctaaaa tcgctataaa atttgatata
     4261 gatcaaaatg aggctataca aacaagggaa aaactactta aagaatttaa agaaagaaaa
     4321 ctcaaagtta tagggactca tgtgcctttt atcaaaccta aatttttaga ttaattactt
     4381 aaaaattact aaaaattaag taaaaatttt aataattttt gctaaaatta tagccttttt
     4441 atttcatgaa aggagaaaat tttggcaaaa gatgatgtaa ttgaaattga tggcaccgta
     4501 cttgaagcat tgcctaatgc aaatttcaag gttgaacttg acaacaaaca tgtaatttta
     4561 tgtcatattg caggaaaaat gcgtatgcat tatataagaa taatgccagg tgataaagta
     4621 aaagtagaac ttacacctta tagtcttgat aaagggcgta taacttttag atataaataa
     4681 tctaagttat ttaaaagcta attttagata aaattagagt ttttgcgaca aattacatcg
     4741 aactatatga agaagtattt ttaaaatcca ccacttattt tgaaaatagt tggttattca
     4801 taaaacctga tgtagtcgta aatcaagtgg aattcattca aggagacgct catgaaagtg
     4861 agaccatcgg ttaaaaagat gtgcgacaaa tgcaaagtag ttcgccgtaa aggcgtggtt
     4921 cgcattattt gcgaaaatcc aaaacataaa caaagacaag gataaacatg gctcgtattg
     4981 caggtgtgga tttaccaaag aaaaaaagaa ttgagtatgg actaacctat atttatggta
     5041 taggactttt cacttcaaga aaaattctag ataaagtagg aatttcttat gataaaagag
     5101 ttcatgagtt aagtgaagat gaagcagcag ctatccgtaa agaaattcaa gaaaactata
     5161 tggttgaagg ggatttgaga aaacaagttg ctatggatat taaagcactt atggatttag
     5221 gaagctttag aggtttaaga cacagaaaag gcttaccagt tcgcggacaa aaaacaaaaa
     5281 caaacgcaag aactagaaaa ggtaagagaa aaactgttgg tgcaaaatca taaggataaa
     5341 tcatggcaaa aagaaaaatc gtaaagaaaa aagtagttaa aaaaaatata gcaaaaggta
     5401 ttgtttatat cagtgcgact tttaacaata ctatggttac agtaactgat gaaatgggaa
     5461 atgctatcgc ttggagtagt gcaggtggtt taggatttaa aggttctaaa aaatcaactc
     5521 cttatgcagc acaacaagca gtagaagacg ctttaaataa agcaaaagaa cacggaatta
     5581 aagaagtagg cattaaagta caaggaccag gaagcggtag agaaactgct gttaagagtg
     5641 taggtgctat ggaaggaatc aaagtaactt tcttaaaaga tatcactcca ttagctcaca
     5701 atggttgcag accgcctaag cgtcgtcgtg tctaagatat aagaaaaatt taggagaata
     5761 ttatggcaag atatagagga ccagtagaaa aattagaaag acgctttggt gttagcttag
     5821 cattaaaagg agaaagaaga ctagctggca aaagtgcact agataaacgc ccttatgcac
     5881 caggacaaca cggagcaaga aaaggtaaaa ttagtgagta tggacttcaa ttaagagaaa
     5941 aacaaaaagc taaatttatg tatggagtaa gcgaaaagca attccgtcgt ttatttgctg
     6001 aagcagcaag aagagaagga aatacagggg tattacttat ccaactttta gaacaaagat
     6061 tagacaatat agtatataga atgggttttg ctacaacacg tcgttttgca agacaacttg
     6121 taacacatgg acatgtttta gtaaatggta aaagagtgga tattcctagc tttagagtag
     6181 aagcaggtgc taaaatcgaa attatcgaaa aaagcaaaaa caatcctcaa attacaagag
     6241 ctatcgaact tacagcacaa actggaatcg ttgcttgggt tgatgttgaa aaagataaga
     6301 gatttggaat tttcacaaga aaacctgaaa gagaagaagt tgtcattccg gttgaggaaa
     6361 gatttatcgt tgagctttac tctaaataat aggggctaaa tatgagaaat attacaacat
     6421 ctgcttatac gccaacagaa tttacaatag aaaacattag tgatactgtg gctaaaatca
     6481 gtgcttggcc ttttgagatc ggctatggaa tcaccctagc ccatccttta cgccgtttac
     6541 tttacactag caccatagga tatgctccaa ctgcgattca tattgatggc gtagctcatg
     6601 aatttgatag catgcgtggt atgcttgaag atgtagcact ttttatcatt aatctaaaaa
     6661 aactacgctt taaaattaaa ggcgactcaa ataaagaaat agtagaattt agctttaaag
     6721 gctcaaaaga aatttacggc aaagatctaa ataatgatca agtagaagta gtaaataaag
     6781 acgcctatct agcaacaatc aacgaagatg ctgaactcaa attcacattg atcgttgaaa
     6841 aaggtattgg ctatgtacca agcgaagaaa ttaaagagct tataaatgat cctaaattta
     6901 tagctttaga tgctttcttt acacctgtaa gagaagcaac ctatgatatt gaaaaagttt
     6961 tatttgaaga taatcctgat tatgaaaaag tggttttaac cgtaacaact gatggacaaa
     7021 tcactccaaa tgaagctttt caaaatgctc tagaagctat gtataaacaa ttatcagtat
     7081 ttgataaaat taccaatgtt agaagtgtaa ttaaaaatca agcaacaagc aatgaactag
     7141 aaaatactaa attattgcaa aacattacag atttaaattt aagtgctaga agttataatt
     7201 gtcttgaaaa agcaggagtg gtttacatag gcgagcttgc tttgatgagt gtaagtgaac
     7261 ttgcagggct taaaaattta ggtaaaaaat ctcttgatga aattaaaaac atcatggaaa
     7321 gcataggttt tcctgtggga acttctaagc ttagcgataa taaagaaata cttaaaaata
     7381 aaatcgcaga attaaaagca caaaacgaag gataaagaat gagacataaa catggatata
     7441 gaaaacttgg cagaacttca tctcatcgtg ctgccttatt aaaaaattta actatagctt
     7501 tagtaaatag cggaaaaatc gaaaccactc taccaaaagc taaagaatta agaggttatg
     7561 tagaaagatt gattactaga gcaagacttg gagattttaa cgctcataga gcagtttttg
     7621 cttcattaca agataaaaac gctaccaata aactagtaac tgaaattgct ccaaaattca
     7681 aagatcgcaa tggcggatat acaagaatca tcaaaacaag aattcgccgt ggtgatgccg
     7741 ctgaaatggc tttcatcgaa tttgtagctt aatcaaatcc tagcttttgc taggattaat
     7801 acttcaatta aatatcctaa aaataaaaag ttttaaataa ttattttaaa taaaatta
//
LOCUS       DAPIVO010000070         7647 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.070, whole genome shotgun sequence.
ACCESSION   DAPIVO010000070 DAPIVO010000000
VERSION     DAPIVO010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7647)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7647)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7647
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.070"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..1211)
                     /locus_tag="RJ239_001556"
     CDS             complement(<1..1211)
                     /locus_tag="RJ239_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HDV7331660.1"
                     /translation="MLKQKITQAPKTKISQTLRSWLPILQANIEDLKENLDKFAEDNP
                     FLNVQDSIQTHDKGKNYFDSFYKHNVNSAFVDSKGLAKKSVYELLNEQILPPLFPTSK
                     SQELAKKIIECLNEEGYFEHDEEFLKEYSLEEIERVRARFKFLDPVGVGAKDYKEAFL
                     FALENMELDEDIDEFCRMLIMDFENIQNYTKEPLYKEALAVLKRFSTPPFLEYFEDSR
                     IIVPDIFVYKENGEIKVKINDDYYPEISIQTDGLEHDFLSHYIKEAKNLVDALAMRKA
                     TLYKIGLMIVEYQYDFFMGKEIKPMTFKDLALDLERNASTISRAVANKYLSCERGLIP
                     LRDFFAFALDEEGETSNVGVKEFVANLVKNEDRNKPLSDSKILELIKEEFKVDIGRRT
                     ITKYRKHLNIA"
     gene            complement(1211..1939)
                     /gene="lptB"
                     /locus_tag="RJ239_001557"
     CDS             complement(1211..1939)
                     /gene="lptB"
                     /locus_tag="RJ239_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HDV7331661.1"
                     /translation="MSKLEIVNLEKIIKKTKIIHGISLEVNSGEVVGLLGPNGAGKTT
                     TFYMICGLISPSSGKVLLDGLDVTKDPLNKRARSGIGYLPQESSIFKDLSVEDNLLLA
                     AQIFYKDKKILHDKVEQMLELLSIEPIRLRKGLSLSGGERRRCEIARSLMCEPKFLLL
                     DEPFAGVDPIAVAEIQTLIKELKRLGIGVLITDHNVRETLAICDRAYVIRSGSLLASG
                     NADEIATNKDVKKYYLGAEFKLLD"
     gene            complement(1932..2339)
                     /gene="tsaE"
                     /locus_tag="RJ239_001558"
     CDS             complement(1932..2339)
                     /gene="tsaE"
                     /locus_tag="RJ239_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HDV7331662.1"
                     /translation="MKEFILAKDEIKTMLQIMPKEGVVLLQGDLASGKTSLVQAWVKF
                     LGLDARVDSPTFSTMQKYENHDICIYHYDIYQEGLEGLLANGLFENFFEKGLHLVEWG
                     GENLKKTLMKFGISTIQIKISIKDDKRKYEIYE"
     gene            complement(2336..2581)
                     /locus_tag="RJ239_001559"
     CDS             complement(2336..2581)
                     /locus_tag="RJ239_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HDV7331663.1"
                     /translation="MRVDKFLNVVNITKRRAISEDMCKSGVVGINGVIVKASKEVKVG
                     DIITLHFTEYTQKYKVLAIPSTKSIPKNAQNEYVVKL"
     gene            2736..3956
                     /locus_tag="RJ239_001560"
     CDS             2736..3956
                     /locus_tag="RJ239_001560"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HDV7331664.1"
                     /translation="MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGE
                     ELEPARKKALSLGIKEENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIARPLI
                     AKTQAQIALQTGADAVSHGATGKGNDQVRFELGYLAFSPDLKIIAPWREWDLNSREKL
                     LAYAQKHGIDISKKKGKSPYSMDANLLHISYEGLVLEDPAHTPEEDMWRWSKSPKDAP
                     NESEIIELDFQKGDLVAINGEKLSPAGLLTKLNELGCKHGIGRLDIVENRYVGMKSRG
                     CYETPGGTILLKAHRALESITLDREAAHLKDELMPKYASLIYNGYWFSPERMMLQALI
                     DESQIHANGRVKLELYKGNVMVIGRESANDSLFNAAYCTFEEDEVYNQKDAAGFIKLN
                     ALRFIIAGKNGRKF"
     gene            3969..4412
                     /locus_tag="RJ239_001561"
     CDS             3969..4412
                     /locus_tag="RJ239_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HDV7331665.1"
                     /translation="MKVLLIKDVKALGKAGEIKEVKDGYGQNFLIAKGFAKAATNEVL
                     RKYESDKKKEAENLRFEIANLEKLKEELSKITLEISKPVGANGSLFGGVTKDEIAHAL
                     KEQSHIEIDKKSLECDTLKSLGIHEVSVKLGHAIHAKFNINIKAK"
     gene            4412..4954
                     /gene="hslV"
                     /locus_tag="RJ239_001562"
     CDS             4412..4954
                     /gene="hslV"
                     /locus_tag="RJ239_001562"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HDV7331666.1"
                     /translation="MFHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNG
                     KVLAGFAGSTADAFNLFDMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVL
                     DRNHIFLLSGTGDVVEPEDGQIAAIGSGGNYALSAARALAKHTDLDEEELVKSSLQIA
                     GEICIYTNTNIKTYVIEDEK"
     gene            4951..6270
                     /gene="hslU"
                     /locus_tag="RJ239_001563"
     CDS             4951..6270
                     /gene="hslU"
                     /locus_tag="RJ239_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HDV7331667.1"
                     /translation="MNLTPKEIVKFLDDYVIGQKKAKKIIAIALRNRYRRMQLSPELQ
                     DDIVPKNILMIGSTGVGKTEIARRLAKMMGFPFIKIEASKYTEVGFVGRDVESMVRDL
                     ANAALNLVKNEQREKNKDKIDEFIENKILEKLLPPLPKGISDEKQEEYKNSLEKMRTK
                     LRNGDLDESTIEIEISQNMFDTNPNLPPEMGAMQDIVKVIGVGSKKVKKEMKIKDAKN
                     ALKNEAGEKILDQESIKSEALKRAENEGIIFIDEIDKIAVSSGNSNRQDPSKEGVQRD
                     LLPIVEGSNVQTKIGTLKTDHILFIAAGAFHLSKPSDLIPELQGRFPLRVELDSLDDK
                     ALYEILTRPKNSLLKQYSQLLKTENLELEFDDEAIKEIAKIASRANEEMQDIGARRLH
                     TVIEKLLEDLSFEADEYAGKKFVVDKKMVEEKLGDIIENKDLARYIL"
     gene            6267..7142
                     /gene="era"
                     /locus_tag="RJ239_001564"
     CDS             6267..7142
                     /gene="era"
                     /locus_tag="RJ239_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HDV7331668.1"
                     /translation="MKSGFVSIIGRTNAGKSTLINSLLEEKIALVSHKQNATRRKIKA
                     IVMHEKNQIIFIDTPGLHESGATLNQLLVQSAIKSMGDCDVILFVASVFDSTKDYENF
                     LSLNPQVPHIITLNKVDLTDNATLLKKLSEYAKFSQHFKAIIPYSSKKKSYKKGLLDE
                     IVKYLDEHEYFYDPEFLSASSEKEIYRDFILESIYENLSDELPYSSEVLIHRTKDTPN
                     LLILEANIITDTNSHKGMLIGKEGETLKRIGKDARFKISKLAQKKVLLKLFVTVKKNW
                     QKDEEFLKKLLNDEN"
     gene            7129..>7647
                     /locus_tag="RJ239_001565"
     CDS             7129..>7647
                     /locus_tag="RJ239_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331669.1"
                     /translation="MMKINSLNKINFIKSTDLLYAQRTGISKEDELFNNLTADFKLSK
                     PFDYQIAFFKHNEIYHCFLAPVYKLKKSRFCFPEPLIFQALFDERFIEESDYCVLNLY
                     DQTLYLYFYQEGKFINLKKIENFNPSNMDLFFKQNRFIELLKHYESKLLLYQDLDTIK
                     HYFSSQIKCLNLN"
BASE COUNT         2819 a         1270 c         1203 g         2355 t
ORIGIN      
        1 cttgctatat taagatgttt gcgatatttt gtaatagttc ttcgccctat atcgacttta
       61 aattcttctt taattaattc taaaatttta ctatcgctta aaggtttatt gcgatcttca
      121 ttctttacta aatttgccac aaattcttta acacctacat ttgaagtctc tccctcttca
      181 tcaagagcaa aagcaaaaaa atcacgcaaa gggataagtc ctctttcaca acttaaatat
      241 ttatttgcca cagctcttga tatagtcgaa gcattgcgtt ctaaatcaag tgctaaatcc
      301 ttaaaagtca taggttttat ctcttttccc atgaaaaaat catattgata ttctactatc
      361 ataagcccta ttttataaag agtagctttt ctcatcgcta aagcatcaac taaatttttt
      421 gcttctttga tgtaatgact taaaaaatca tgctctaaac catcagtttg gattgaaatt
      481 tcaggataat aatcatcatt gatttttact ttaatttcac cattttcttt ataaacaaaa
      541 atatcaggaa caattatacg agaatcttca aaatattcca aaaaaggggg agtgctaaag
      601 cgcttaagta cagctaatgc ttctttatat aaaggctctt tggtatagtt ttgtatattt
      661 tcaaaatcca taatcaacat tctacaaaac tcatcaatat cttcatctaa ctccatattt
      721 tcaagagcaa ataaaaatgc ttctttataa tctttagctc ccactcctac aggatctaaa
      781 aatttaaatc ttgctcttac tcgctcaatt tcttccaaag aatactcttt taaaaattct
      841 tcatcgtgtt caaaatatcc ttcctcattt aagcattcta taattttttt tgcaagttct
      901 tgagatttgc ttgtaggaaa caaaggagga agaatctgtt catttaaaag ctcataaaca
      961 ctttttttgg caagtccttt actatccaca aaagccgaat ttacattatg tttataaaat
     1021 gaatcaaaat aattcttacc cttatcatga gtttgtatcg aatcttgaac atttaagaaa
     1081 ggattatcct cagcaaattt atctaaattt tcttttaaat cctctatatt tgcttgtaaa
     1141 atcggcaacc aagagcgtaa agtttgagaa attttagtct tgggtgcttg ggtgattttt
     1201 tgctttaaca tcaatcaagg agtttaaact ccgctcctaa ataatacttt ttcacgtctt
     1261 tattggttgc aatttcatca gcattcccac tagcaagcaa agagcccgat cttataacat
     1321 aagctctatc acaaatagcc aaagtctcac gcacattatg atcggtaatt aaaaccccaa
     1381 tccctaatct tttaagctct ttaattaaag tttgaatttc agccactgct ataggatcaa
     1441 cacctgcaaa aggctcatca agaagcaaaa acttaggttc acacatcaag cttctagcga
     1501 tctcacaacg ccttctttca cctccactta aacttaaacc tttccttaaa cgaataggct
     1561 ctatacttaa gagttcaagc atttgctcaa ctttatcatg taaaattttt ttatctttat
     1621 aaaaaatctg agccgctaaa agcaggttat cttctacact taaatcctta aaaatactac
     1681 tttcttgagg taaataacct atccctgatc tagctctttt gtttaaagga tcttttgtca
     1741 catctaaacc gtctaaaaga acttttccac tacttgggga aataagtcca catatcatat
     1801 aaaaagttgt cgtttttcct gcaccatttg gccctaaaag tcctacaact tctccgctat
     1861 taacctctaa agaaattcca tgtataatct tagttttttt aataattttt tctaaattta
     1921 caatttctaa tttactcata aatttcatac tttcttttgt catctttaat gctaatttta
     1981 atctggatag tagaaattcc aaatttcatt aaagtttttt tcaaattttc accgccccat
     2041 tcaaccaaat gtaaaccttt ttcaaaaaaa ttttcaaata aaccatttgc taaaagtcct
     2101 tctaaacctt cttgataaat atcataatga taaatgcaaa tatcatgatt ttcatatttt
     2161 tgcatagtgg aaaaagttgg agaatccacc cttgcatcaa gaccaagaaa tttaacccaa
     2221 gcttgtacta agcttgtttt tccgctagcc aaatctcctt gaagcaaaac aacaccttct
     2281 ttaggcatta tttgaagcat cgttttgatc tcatcttttg ctaaaataaa ttctttcata
     2341 attttaccac atattcattt tgtgcgtttt taggaatgct tttcgtgcta ggtatagcta
     2401 ggactttata tttttgggtg tattcagtaa aatgtaaagt gatgatatca cccaccttaa
     2461 cctctttact cgctttaaca ataacgccat taatccccac tacaccactt ttacacatat
     2521 cctcagaaat agctcttctt ttcgtgatat taactacatt taaaaattta tctactctca
     2581 taaaagcaat tttagcaaaa aaaatcaatt tttggaacaa aatttgctta cgcctttgct
     2641 ttatttttta agaaaatagc aagtaaaaac ttttctttaa tgaaatttgg atacaatttt
     2701 acaattttca aatctatttt aacaaaggat atcttatgaa aaatgaagta aaaaaagtag
     2761 ttttagcgta ttctgggggg cttgatacga gcattatttt aaaatggctt caagatgagt
     2821 ataattgtga agttgtaact tttacagcag atattggtca aggtgaagaa ctcgaacctg
     2881 caagaaaaaa agccctttct ttaggcataa aagaagaaaa tattttcatt aaagatttaa
     2941 gagatgaatt tgttaaagat tatgtatttc ctatgtttag agccaatgcg atttatgaag
     3001 gagaatatct tttaggaaca agtatagcaa gaccacttat agcaaaaact caagcacaaa
     3061 tcgccctgca aacaggtgct gatgcggtaa gccatggtgc cacaggtaaa ggaaatgatc
     3121 aagtgcgttt tgaacttggc tatcttgctt ttagtcccga tttaaaaatc atcgctccat
     3181 ggcgtgagtg ggatttaaac agtcgtgaaa aactccttgc ttatgcgcaa aaacatggca
     3241 ttgatatttc taagaaaaaa ggaaaatccc cttattctat ggacgcaaat ttacttcata
     3301 tttcttacga aggacttgtt ttagaagatc ctgcacacac acctgaagaa gatatgtgga
     3361 gatggagtaa aagcccaaaa gacgctccaa atgaaagtga aattatagaa cttgatttcc
     3421 aaaaaggaga tttagtagcg ataaatggag aaaaactaag tcctgcagga cttttaacca
     3481 aacttaacga actaggctgc aaacacggta taggacgcct tgatatagta gaaaatcgct
     3541 atgtaggcat gaaaagccgt ggttgttacg aaactccagg cggtactata cttttaaaag
     3601 cacatagagc gcttgaaagc atcacgcttg atagagaagc agcacactta aaagatgaac
     3661 tcatgccaaa atacgcgagt ttaatttata atggctattg gttctcgcct gaaagaatga
     3721 tgcttcaagc cttaatcgat gagtctcaaa ttcacgccaa tggcagagta aagctcgagc
     3781 tttataaagg caatgtgatg gttataggac gcgaaagtgc gaacgatagc ttgtttaacg
     3841 cagcttattg tacttttgaa gaagatgaag tgtataatca aaaagacgca gcaggcttta
     3901 tcaagcttaa tgctttgcgt tttatcatcg caggaaaaaa tggaagaaaa ttttaataaa
     3961 ggaataaaat gaaagtatta ttaatcaaag atgtaaaagc acttggaaaa gcaggagaaa
     4021 taaaagaagt aaaagacggc tatggacaaa atttcttaat cgctaaaggc tttgctaaag
     4081 cagctactaa tgaagtttta agaaaatatg aaagcgacaa gaaaaaagag gctgaaaatt
     4141 tacgctttga aatcgcaaat ttagaaaaac tcaaagaaga acttagcaaa atcactcttg
     4201 aaatttcaaa acccgtaggt gcaaatggaa gtttgtttgg tggcgtaacc aaagatgaaa
     4261 tcgctcacgc cctaaaagaa caaagccata tagaaatcga taaaaaaagt ttagaatgtg
     4321 ataccttaaa aagcttagga atccacgaag taagcgtaaa acttggacac gcaatccatg
     4381 ctaaatttaa cataaatata aaggcaaaat aatgtttcac gcaacaacga ttttagctta
     4441 caaaggtaaa aataaatccg taattggcgg agatggacaa gtaagctttg gaaatacggt
     4501 gctaaaaggc aatgctgtaa agattagaaa actcaacaat ggcaaagttt tagcaggttt
     4561 tgcaggatca acagctgatg cttttaatct ttttgatatg tttgaaaatc tccttcaaag
     4621 ttctaaaggc gatcttttaa aagcagcaat tgacttttct aaagaatgga gaaaagacaa
     4681 atacctaaga aaacttgaag ccatgatgct cgtacttgat agaaatcaca tttttctact
     4741 ttctggtaca ggcgatgtgg tcgaacctga agatggacaa atcgcagcca taggaagtgg
     4801 tggaaactat gcgctttcag ctgctagagc cttagcaaaa cataccgatt tagatgaaga
     4861 agaacttgta aaatcaagtc ttcaaatcgc aggtgaaatt tgcatttata ccaataccaa
     4921 tatcaaaact tatgtaattg aggatgagaa atgaatctaa ctccaaaaga aatcgttaaa
     4981 tttttagatg attatgttat aggacaaaaa aaagctaaaa aaatcatagc tatagcttta
     5041 agaaatcgct accgcagaat gcaacttagc cctgagttgc aagatgatat agtgccaaaa
     5101 aatatcttga tgataggttc tacaggtgta ggaaaaacag aaatcgctag gcgtttagct
     5161 aaaatgatgg gttttccttt catcaaaatc gaagcaagta aatatactga agtaggtttt
     5221 gtaggtcgtg atgtagaaag catggtaaga gatcttgcca atgcggcttt aaatttggta
     5281 aaaaatgagc aaagagaaaa aaacaaagat aaaatcgatg aatttataga aaataaaatt
     5341 ttagaaaaac ttttaccacc tttaccaaag ggtatcagcg atgaaaaaca agaagaatat
     5401 aaaaacagtc ttgaaaaaat gagaactaaa ctaagaaatg gcgatcttga tgaaagcacc
     5461 atagagatag aaatttcaca aaatatgttt gataccaatc ccaacctacc tcctgaaatg
     5521 ggtgcaatgc aagatatagt taaggttata ggcgttggca gtaaaaaagt caaaaaagaa
     5581 atgaaaatca aagacgctaa aaatgcttta aaaaatgaag caggagaaaa aatcctcgac
     5641 caagaaagca tcaaaagcga agccttaaaa agagcggaaa atgaaggtat tatttttatt
     5701 gatgaaatcg ataaaatcgc tgtttcaagc ggaaattcaa accgccaaga tccaagtaaa
     5761 gaaggggtgc aaagagactt acttcctata gtcgagggat caaatgtaca aacaaaaata
     5821 ggtactttaa aaaccgatca tattcttttt atcgctgcag gggcttttca tcttagcaaa
     5881 ccaagtgatc ttatccctga actgcaagga cgctttcctt taagagtgga attagatagt
     5941 cttgatgata aagctcttta tgaaatttta acacgcccta aaaattcact tttaaaacaa
     6001 tactctcagc ttttaaaaac tgaaaattta gaacttgaat ttgatgatga agccattaaa
     6061 gaaatagcaa aaatagcttc aagagccaat gaagaaatgc aagatatagg tgctagacgc
     6121 ttacatactg tgatagaaaa attacttgaa gatctaagtt ttgaagctga tgagtatgcg
     6181 ggtaaaaaat tcgtagtgga taaaaaaatg gtagaagaaa aactcggaga tatcatagaa
     6241 aataaagatc ttgcaaggta tattttgtga aaagtggctt tgttagtatc atagggcgta
     6301 ctaatgcagg aaaaagtact ttaatcaatt ccttattaga agaaaaaatc gccctagttt
     6361 ctcacaaaca aaacgccaca aggcgtaaaa tcaaagccat agtgatgcat gaaaaaaatc
     6421 aaatcatttt catcgatacc ccaggacttc acgaaagcgg tgctacgctt aatcaactgc
     6481 ttgtccaaag tgctattaaa tccatggggg attgtgatgt gattttattt gtggcgagtg
     6541 tttttgatag tacaaaagac tatgaaaatt ttcttagtct aaacccacaa gtaccacata
     6601 tcatcacttt aaataaagta gatttaaccg acaatgctac acttttaaaa aaacttagcg
     6661 aatatgcaaa atttagccaa cattttaagg ctatcattcc ttattcttct aagaaaaaaa
     6721 gctataaaaa aggcttgtta gatgagatag taaaatatct tgacgaacat gaatattttt
     6781 atgatcctga atttttaagt gcgagtagcg aaaaagaaat ttatagagat ttcatacttg
     6841 aaagtattta tgaaaattta agcgatgagc ttccttatag tagcgaagtg cttatccatc
     6901 gcaccaaaga cacacctaat cttttaatcc tagaagccaa tatcatcaca gatacaaact
     6961 ctcacaaggg tatgcttata ggaaaagaag gggaaacttt aaaaagaata ggcaaagatg
     7021 cacgctttaa aatttcaaaa cttgcccaaa aaaaggtact tttaaagctt tttgtaacag
     7081 tgaaaaaaaa ctggcaaaaa gatgaagaat ttttaaaaaa acttctaaat gatgaaaatt
     7141 aattcattaa ataaaataaa ttttataaaa tctacagatt tactttatgc tcaaagaacg
     7201 ggaatatcca aagaagacga actttttaac aatttaactg cagattttaa gctaagcaaa
     7261 ccctttgact atcaaatagc tttttttaaa cataatgaaa tttatcattg ttttttagca
     7321 cctgtttaca aattgaaaaa aagtcgtttt tgctttcccg agcctttaat ttttcaagct
     7381 ttatttgatg aaagatttat tgaggaaagt gattattgtg ttttaaattt atatgatcaa
     7441 actttatatt tatattttta ccaagaggga aaatttatca atcttaaaaa aatcgaaaat
     7501 ttcaacccaa gcaatatgga tttatttttt aaacaaaatc gatttataga acttttaaaa
     7561 cactatgaaa gcaaattgct actttatcag gatttggata caatcaaaca ttacttctca
     7621 tctcaaataa aatgtttaaa tctaaat
//
LOCUS       DAPIVO010000071         7398 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.071, whole genome shotgun sequence.
ACCESSION   DAPIVO010000071 DAPIVO010000000
VERSION     DAPIVO010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7398)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7398)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7398
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.071"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            106..1596
                     /locus_tag="RJ239_001566"
     CDS             106..1596
                     /locus_tag="RJ239_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDV7331670.1"
                     /translation="MLTWMQHHKKYLVVTIWVSTIAFVGAGFLGWGAYDFNLNRSSSV
                     ATVGNEKIGFSEFDTRYRQILSYYNQISNGALTPENAEQLGIKNIALSSLVEDKLLLN
                     FAKDLGIGVNENQILQKLANTREFQDPTGDFNKTIYYELLNANNLAPKDYETQLANEV
                     ITDKLNQIFNIPSKDEELKMLASSYFMQDALSIAKIDYDKKNIKINEEDLKKLWNEHK
                     EDYKTKKIYEISTYFLPVSNEKIDDKELEKFYNQDENKLKYKDFAGKVMDFQSAKNEV
                     AKDYALMQLKNVANAKFLDLKNGKDNFQKDQNISESDVYYPIDLLNKAKNGDVLRPAP
                     YNNGYIIVKLNKVDPIRNKTFEEAREEVLPMYLSEQARKNLEEKAKNSLVNFKGDDIG
                     FVSRDSSRESVKVSDKILNDSEFAYFLMNVFNTDQNSSYVVINDNKAILYKINKQKLD
                     MNSDKFEQYKTMLEQNLQNLKANELKQELVDELKKIYPIKIYYKGN"
     gene            1593..2981
                     /gene="ftsA"
                     /locus_tag="RJ239_001567"
     CDS             1593..2981
                     /gene="ftsA"
                     /locus_tag="RJ239_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HDV7331671.1"
                     /translation="MILNILGIDLGSTQTCAIIAQKDEDGLKIIGFSKSKTNGVKKGA
                     ITNIELASKSIEEAVRSAEMMSGVHYDRVVVSISGAYTKSVDSIGVVNIPNHEIGIKE
                     IHRAVSTAKHTANLPSGYEIIHVLPYNFKVNDLEHVDDPLGMSGNRLEVSTHIVISQE
                     SHIKNLKKAVELADLRVDNIVLSGYASAIACLDDSEKELGAVLIDMGGAICDMVVHTG
                     NSIRYNDCLQIGSINITQDLSMALHTPLKEAEKIKLNYAALSQQPNTLIQIPSMGDER
                     KVNEVSLDIISNVIYARAEETLMILAKILSDNRYANAIGGGVVLTGGMTKLAGIDELA
                     PAIFDNRSVRLATARKDLITGFSEIFNDPENTCAIGLCLYGAGYFTPYELDSNEKLRY
                     KGEIENFNRQIKQDIVLQKDTESEIKSDFFDENLQENDTIAIQEQLDFKEPKEKKPSV
                     FSNIWHKIMNQF"
     gene            2997..4109
                     /gene="ftsZ"
                     /locus_tag="RJ239_001568"
     CDS             2997..4109
                     /gene="ftsZ"
                     /locus_tag="RJ239_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HDV7331672.1"
                     /translation="MSEFLVEEMQHNKGAKIKVIGCGGGGGNMINHMVKMGLNDLDLI
                     AANTDAQAISISLAKTKIQLGEKKTKGLGAGMLPEVGAESARESFEEIKASLSQSDIV
                     FIASGFGGGTGTGATPVIAQAAKEIGALTVSVVTMPFAFEGKQRKKLAESGLLELKKE
                     SDSILVIQNEKLLSIIDKKAGIKDAFRLVDDILARAVKGMVSILLDNGDINVDFADVR
                     TIMSHRGLALMGVGSASGENAIEEALSNAIESPLLDGMDIKGAKGVILHFKTSSNCSL
                     FEISAAANSIQEIVDENAKIIFGSTTDDSMEDRVEVTIIATGFEDKDTVAKKSTEEAQ
                     ASKKNPYLSLKKVSGGYDEEIMAQIETPTFLRRQMD"
     gene            4265..5077
                     /locus_tag="RJ239_001569"
     CDS             4265..5077
                     /locus_tag="RJ239_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body protein"
                     /protein_id="HDV7331673.1"
                     /translation="MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADF
                     KRIFKETQDELPIENHTRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMT
                     REDAFYLVQTKDGEVRLTKDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNG
                     AVQISVDKNGSIEVDGAQNARLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAI
                     RQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTAHMDDLNQEAINKLAAVK"
     gene            5106..5897
                     /gene="flgG"
                     /locus_tag="RJ239_001570"
     CDS             5106..5897
                     /gene="flgG"
                     /locus_tag="RJ239_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HDV7331674.1"
                     /translation="MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFADL
                     MYQVMKYAGTSTSATTLSPSGIEVGVGVRPTAVTKVFTEGNLKSTSTDGLDMAIAGNG
                     FFQIQLPDGTIGYTRNGQFTKDNEGNIVNSDGYRLLPEMTIPEGATAINVATDGTVSV
                     MLPGEQQETQIGQVELVQFINPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHG
                     FIELSNVQLVEEMTDLITGQRAYEAGSKAITTSDDMLGIVNQLKR"
     gene            complement(5964..7394)
                     /gene="glnA"
                     /locus_tag="RJ239_001571"
     CDS             complement(5964..7394)
                     /gene="glnA"
                     /locus_tag="RJ239_001571"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HDV7331675.1"
                     /translation="MGKFVNNIDDFFKFCKQNEVLFVDFRFTDMIGTWHHITYNLHAI
                     NEETFQTGIPFDGSSIHGWQPIEKSDMILKPDAQSAFLDPFTADPTIIVFCDVYDIYK
                     GQMYEKCPRSIAKKAIEHLKNSGIADTAYFGPENEFFVFDSVKIVDTTHCSKYEVDTE
                     EGEWNDDREFTDSYNTGHRPRNKGGYFPVQPIDSLVDIRSEMVQTLEKVGLKTFVHHH
                     EVAQGQAEIGVNFGTLVEAADNVQIYKYVVKMVAHLNGKTATFMPKPLYGDNGNGMHV
                     HMSLWKNGVNLFYDKDGYSGLSQTAINYIGGILKNARSVAAFTNPSSNSYKRIVPGFE
                     APCILTYSCQNRSASCRVPYGIGKNSARIEIRFPDSTANPYLAFVSLLMAGLDGIKNK
                     TIPVGPMDENLFDLTLDEIREKGIEQLPHTLRGSLEALIRHNSYLKPVMSDIFIDDYQ
                     HLKFETQVWPVEARPTAYEFKTCYSC"
BASE COUNT         2643 a         1007 c         1369 g         2379 t
ORIGIN      
        1 ataaaattta aagaacaaat attttttggt aaaaatttta taattaaact ccacttaaac
       61 acttctacga tacaatatct ggtttaaatt taatcaagga atgatatgct tacttggatg
      121 caacatcaca aaaaatatct tgttgttact atatgggtta gtactatagc ttttgttggc
      181 gctggctttt taggttgggg tgcttatgat tttaatctca atagaagttc gagtgttgca
      241 actgtaggaa atgaaaagat aggttttagc gaatttgata ctagatatag acaaatttta
      301 agttattata atcaaattag caatggtgct ttaactccag aaaatgctga gcaactaggc
      361 attaaaaata tagctttaag ctctcttgtt gaagataagc ttttgttaaa ttttgccaaa
      421 gatttgggta ttggtgtgaa cgagaatcaa attttacaaa aacttgcaaa tactagagaa
      481 tttcaagatc ctacagggga ttttaacaaa acaatttatt atgaactttt aaatgccaat
      541 aatttagctc caaaagatta tgaaacacaa cttgcaaatg aagtaattac cgataaactt
      601 aatcaaattt ttaatattcc tagcaaagat gaggaattaa aaatgttagc ttctagttat
      661 ttcatgcaag atgctttaag tattgcaaaa attgattatg acaaaaaaaa tattaagatt
      721 aacgaagagg atttaaaaaa gctttggaat gaacataaag aagattataa aactaaaaaa
      781 atatatgaaa tttcaactta ttttttgcca gttagcaatg agaaaattga cgacaaagaa
      841 ttagaaaaat tttataatca agatgaaaat aaactaaaat ataaagattt tgcaggtaaa
      901 gtgatggatt ttcagtctgc taaaaatgaa gttgctaaag attacgcctt aatgcaacta
      961 aagaatgtgg ctaatgctaa atttttagat ttaaaaaatg ggaaagataa ttttcaaaaa
     1021 gatcaaaata ttagtgaatc tgatgtttat tatccaattg atcttttgaa taaagctaaa
     1081 aatggagatg ttttacggcc agcaccttat aataacggat atatcatagt taaactaaat
     1141 aaagtagatc ctataagaaa taaaactttt gaagaagcta gagaagaagt tttacctatg
     1201 tatttaagcg aacaagctag aaaaaattta gaagaaaaag ctaaaaatag tttagtaaat
     1261 tttaaaggcg atgatatagg ctttgtaagt cgagatagtt ctcgcgagag tgtaaaggtt
     1321 agcgataaaa tattaaacga ttctgaattt gcttattttt taatgaatgt atttaatact
     1381 gatcaaaata gttcttatgt ggtcattaat gacaataaag caatattata taaaataaat
     1441 aaacaaaaat tagatatgaa ctccgataaa tttgaacaat acaaaactat gcttgaacaa
     1501 aatttgcaaa atttaaaagc aaatgagctt aagcaagaac ttgttgatga acttaaaaag
     1561 atatatccga taaaaattta ttataaaggg aattgatttt gaatatatta ggaattgact
     1621 taggctcaac ccagacttgt gccattattg ctcaaaaaga tgaagatgga ttaaaaatta
     1681 ttggtttttc caagtcgaaa accaacgggg ttaaaaaagg tgccattacc aatatagagc
     1741 ttgcttctaa atctattgaa gaggctgtta gaagtgctga gatgatgagc ggagttcatt
     1801 atgatagggt tgtggtgtct atatcaggtg cttatactaa aagcgttgat agcataggtg
     1861 ttgttaatat tccaaatcat gaaataggca ttaaagaaat tcatcgtgct gtaagtacag
     1921 ctaagcatac tgccaatcta ccaagtggtt atgaaattat ccatgttttg ccttataatt
     1981 ttaaggttaa tgatcttgaa catgttgatg atcctttggg aatgagtggc aatcgtttag
     2041 aagtttcaac ccatatagtg atttcacaag aatctcatat taaaaatctt aagaaagcag
     2101 ttgaattagc tgatttaaga gtggataata tagttctttc aggatatgct tcagctatag
     2161 cttgtttaga tgatagcgaa aaggaattag gtgctgtttt gattgatatg ggtggagcga
     2221 tttgtgatat ggttgttcat actggaaatt caattagata taatgattgt ttgcaaattg
     2281 gctcgattaa tatcactcaa gatttatcaa tggcattgca tacaccttta aaagaagcag
     2341 aaaaaatcaa gcttaattat gcagctcttt cacaacagcc taataccctt atacaaattc
     2401 cttcaatggg tgatgaaaga aaggttaatg aagtttcttt ggatattatt tcaaacgtaa
     2461 tttatgcaag agcggaagaa actttgatga ttttggcaaa aatcttaagt gataatcgtt
     2521 atgccaatgc tataggtggc ggagttgttt taacaggtgg aatgactaag ttagcaggta
     2581 ttgatgagct agctcctgca atatttgata atcgctcagt tagactggct actgcaagaa
     2641 aagatttgat tactggtttt agtgaaattt ttaatgatcc tgaaaatact tgtgctatag
     2701 gactttgttt atatggagcg ggatatttta cgccttatga acttgattct aatgagaaat
     2761 taagatataa aggggaaatt gaaaatttta atcgtcaaat taaacaagat attgttttgc
     2821 aaaaagatac agaaagtgaa ataaaatctg atttttttga tgaaaatttg caagaaaatg
     2881 atacaattgc aatacaagaa caattagatt ttaaagagcc aaaagaaaaa aaacctagtg
     2941 ttttttcaaa tatctggcat aaaattatga atcaatttta acaaggagaa atttttatga
     3001 gtgaattttt agtagaagaa atgcaacata ataaaggtgc aaaaattaag gttataggct
     3061 gcggtggcgg tggcggtaat atgattaacc atatggttaa aatgggatta aatgatcttg
     3121 atttaattgc agcgaatact gatgcacaag ctatttcaat ttcattagca aaaactaaaa
     3181 ttcaacttgg cgagaaaaaa actaaaggtt tgggcgctgg tatgcttcct gaagtaggtg
     3241 cagaaagtgc tagagaaagt tttgaagaaa taaaagcaag tcttagtcaa agtgatattg
     3301 tatttattgc ttcaggtttt ggtggaggta ctggaacggg tgccactcca gttattgcac
     3361 aagcagctaa agagatcgga gctttaactg tttctgttgt aactatgcct tttgcattcg
     3421 aaggaaaaca aagaaaaaaa cttgctgaaa gcggtctcct tgagcttaaa aaagaaagtg
     3481 attctattct tgtaattcaa aatgaaaaat tattgagcat tattgataaa aaagcaggta
     3541 ttaaagatgc ttttaggttg gttgatgata ttttagctcg tgctgtaaaa ggtatggtgt
     3601 ctatcttact tgataatgga gatattaatg ttgactttgc ggatgtaaga accatcatga
     3661 gtcatcgcgg actcgcgctt atgggtgttg gtagtgctag cggtgaaaat gctatagaag
     3721 aggctctttc aaacgctata gaatctcctt tgcttgatgg aatggatatt aaaggtgcca
     3781 agggagttat tttacatttt aaaacaagtt ctaattgctc tttgtttgaa atttcggcag
     3841 cagcaaatag tatacaagaa attgttgatg aaaatgctaa gattattttt ggttctacta
     3901 cagatgatag catggaagat agagttgaag taactattat tgcgacaggg tttgaagata
     3961 aagatacagt agctaaaaaa tctaccgaag aagctcaagc ttctaagaaa aatccttatt
     4021 taagtcttaa aaaggtaagc ggtggttacg atgaagagat aatggcgcaa attgaaacac
     4081 caactttctt gcgtcgtcaa atggattaaa attgattttt aaagcaagat tgagtcaaat
     4141 cttgcttttt atagtttaaa attctctcct aataatcttt caaatattta tttttctttg
     4201 tttttaaaag ttggaacact ctttgctttt atagttataa aatcttaaat ttataggtga
     4261 aaatatgcaa aatggatatt atcaagcaac tggcggaatg gtaactcagt ttaataaact
     4321 tgatgtgatt actaataatc ttgccaatat taatacaagc ggatacaaaa gagatgatgt
     4381 ggttattgca gattttaaaa ggatttttaa agaaactcag gatgagttgc ctatagaaaa
     4441 tcacacaaga gatgcatctc gttttgtaaa tactacaata gatggaatcc cacaagtttc
     4501 tcaagaatat acggatttta gcctaggttc tttaaaggcc acaaacaatc ctttggattt
     4561 ggcaatgact agagaagatg ctttttattt ggttcagacc aaagatggag aagtaagatt
     4621 aaccaaagat ggaaattttc aacttgatga tgagggttat ttggtaaata agcaaggata
     4681 caaggtatta agtagtgatt attttaataa tcctcagaat gctggcatac gcattcctaa
     4741 tggtgctgtt caaattagcg ttgataaaaa cggaagcatt gaagttgatg gagctcaaaa
     4801 tgcaagatta tttgtagcac aagtagatga tataagagct ttgcaaaaag atggggataa
     4861 tgtctataaa atagatgatc taacccgtat tagagatttg aaaaactcca atgctattcg
     4921 ccaaggtttt tctcagggat caaatgttaa tccagttact gaaatggtag gactgattga
     4981 agcaaacaga atggtagaaa tgtatcaaaa agttatgaca gctcatatgg atgacttaaa
     5041 tcaagaagct atcaataagc ttgcagctgt taaataattt aaaataaaat aaaaaaggat
     5101 taaaaatgat gagatcactt catactgctg ctacaggaat ggtagcgcag caaacacaaa
     5161 ttgatgttac ttcaaataac atcgccaatg ttaatacagc aggttttaag aaaagtcgcg
     5221 cagaatttgc tgatcttatg tatcaagtta tgaagtatgc aggaacttca acttcagcta
     5281 ctactctttc tccttcgggt atagaagtgg gtgtgggtgt gcgtccaaca gcggtaacta
     5341 aagtttttac tgaaggaaat ttaaaatcaa caagtactga tggtcttgat atggctattg
     5401 caggtaatgg gttttttcaa atacaacttc ctgatggcac tataggatat actagaaatg
     5461 ggcaatttac aaaagataat gaaggtaata ttgtaaattc agatggttat agacttttac
     5521 ctgaaatgac aatacctgaa ggcgcaacag caattaatgt tgctacagat ggaaccgttt
     5581 ctgtaatgct accaggggag caacaagaaa ctcaaattgg ccaagtggag ctagttcagt
     5641 ttataaatcc agcgggtctt cattctatgg gtgataatct ttatcttgaa acaggagcaa
     5701 gtggtgcacc tgttgcgggt atagcaggac aagatgggct tggaacaata agacatggat
     5761 ttatagaact tagtaatgtt cagcttgttg aagaaatgac agatcttatc acaggacaaa
     5821 gagcttatga agcgggttct aaggccatta caacaagtga tgatatgcta ggaattgtaa
     5881 atcagcttaa gcgatagttg atataaaata aataattttt aattcttttt tgtttaatgg
     5941 cgtgttaaac gccattaaat tttttagcaa gagtagcaag ttttaaattc ataagcagtt
     6001 ggacgagctt ctactggcca aacttgtgtt tcaaatttta aatgctgata gtcatcgata
     6061 aaaatatcgc tcattacagg ttttaaataa gaattatgtc ggattaaagc ttccaaactt
     6121 cctcttagag tatgtggtaa ttgctctatc cctttttcac gtatttcatc caaagtaaga
     6181 tcaaataaat tttcatccat aggacccaca ggaatggttt tatttttgat tccatcaaga
     6241 cctgccatta aaagactaac aaaagctaaa taaggattag cagtgctatc agggaagcga
     6301 atttctatac gagctgaatt tttacctatg ccataaggaa cgcgacaact tgctgatctg
     6361 ttttggcaag aataagttaa aatacaagga gcttcaaagc caggaactat tcttttgtaa
     6421 gagttggaac ttggatttgt aaaagctgca acacttctag cattttttaa aattccacct
     6481 atataattta tagcagtttg actaagtcca ctgtatccat ctttatcgta aaataaattt
     6541 actccatttt tccataagct catatgaaca tgcataccat tgccattatc tccgtataaa
     6601 ggttttggca taaaagtggc agttttgcca tttaaatgag ctaccatttt tacaacatat
     6661 ttataaattt gaacattgtc agctgcttct acaagcgtgc caaaatttac tcctatttca
     6721 gcttgtcctt gtgcaacttc atgatgatga acaaaagttt taagacctac tttttcaagg
     6781 gtttgaacca tttcagaacg aatatctact aaagaatcaa ttggctgaac tggaaaatat
     6841 ccacctttgt ttcttggcct gtgtccagta ttgtagctat cggtaaattc tctatcatca
     6901 ttccactctc cttcttcggt atcaacttca tacttagaac aatgagtagt atcaactatt
     6961 tttacactat caaaaacaaa gaattcattt tctggtccaa agtaagcagt atcagctatg
     7021 ccactatttt taaggtgttc tattgctttt tttgctatgc ttcttggaca tttttcatac
     7081 atttgtcctt tgtaaatatc atacacatca caaaatacta tgatagtagg atcagccgta
     7141 aaaggatcta aaaaagcact ttgagcatca ggttttaaaa tcatatctga tttttctata
     7201 ggttgccatc catgaattga gcttccatca aatggaatgc cagtttgaaa tgtttcttca
     7261 ttgattgcat gaagattata ggtaatatga tgccaagttc ctatcatatc tgtaaaacga
     7321 aaatcaacaa aaagcacttc attttgtttg caaaatttga aaaaatcatc tatattatta
     7381 acaaattttc ccatattt
//
LOCUS       DAPIVO010000072         7220 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.072, whole genome shotgun sequence.
ACCESSION   DAPIVO010000072 DAPIVO010000000
VERSION     DAPIVO010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7220)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7220)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7220
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.072"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..1048
                     /gene="ispG"
                     /locus_tag="RJ239_001572"
                     /gene_synonym="gcpE"
     CDS             <1..1048
                     /gene="ispG"
                     /locus_tag="RJ239_001572"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HDV7331676.1"
                     /translation="QIKVGNVLIGGDAPISVQSMLFTKTRDIEGSLEQINRLYFAGAN
                     IVRLACLDMADARALKEIKAKSPLPLIVDIHFNHNLAVYCAEFIDGVRINPGNIGSKE
                     NIKEVVKACKERGIPIRIGVNHGSIEKQFSDKFGYGVDAMLESAMYNIKLLEDLDFFD
                     IKISMKTSDAQKTIEAYERLRPLCDYPFHLGVTEAGTKFHSTVKSSIALGNLLLKGIG
                     DTMRVSMTGELEEEIRVARAILQDSGVQKSGVNIISCPTCGRIQSDLLSAIKIVEEKT
                     KHIKEPLNISVMGCVVNALGEAKGADVAIAFGKNQGLVIRHGEVVAKLKESELVDRFL
                     AEVEDEVKSRAVKE"
     gene            complement(1078..1776)
                     /gene="flgH"
                     /locus_tag="RJ239_001573"
     CDS             complement(1078..1776)
                     /gene="flgH"
                     /locus_tag="RJ239_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HDV7331677.1"
                     /translation="MKKVLFYVLPFAFFGCSATVDPQISMKPPAYVEELAPKQSNNIE
                     SAPGSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQANKATSRTNTSNLGGGAL
                     TGSSGVVANALNKVNAYSNIGFQTNSSNNYTGTGSQSRNESFNTTISTRVIKILSNGN
                     YFIEGSRELLINGEKQIIQLSGVIRPYDIGQDNTIDSKYIADAKILYKTEGEVDRSAR
                     KPWGSKVIEAIWPF"
     gene            1866..3371
                     /gene="pta"
                     /locus_tag="RJ239_001574"
     CDS             1866..3371
                     /gene="pta"
                     /locus_tag="RJ239_001574"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HDV7331678.1"
                     /translation="MMANLYLMRSRSDELNTIISTNLLKNYSKIYKNIAIYCPVIYIH
                     RVPVLQGWLEEFNINQTVKSAYGFTFREAMEEFSKDPHNFFNVILEEYEELKRKYDFV
                     LVNSFCEFGILDGFDLSIKLAKNLNTPIAAIINDEDKLIAQKYFDHALDGRNYVLINE
                     NFNFEEVQKLKEYDFITPHRFKYELIKQSIKNKKTVVLPESNDERILKAAEILLKSKV
                     VDLILLGDEEKIKQDSAKLSLDLNTIRIINPLKSEYNQEFASILYEARKSKGMSLEEA
                     RKLVQDKTYFGTLLIHTGKADAMVSGASTTTAETIRPALQLIKTKEGISSVSGIFFMG
                     LEDQVLAFADCAVNPSPSAEQLATSAYVSAMTAKSFGLEPRIALLSYSSGDSGKGESV
                     DLVKEALKIAKEKYPELNIDGPMQFDCAYDPKTAAKKMPNSKIAGHANVYIFPDLNAA
                     NICYKAVQRTANALAIGPILQGLKKPVNDLSRGCLVDDIVDTVILSAIQAQ"
     gene            3385..4575
                     /locus_tag="RJ239_001575"
     CDS             3385..4575
                     /locus_tag="RJ239_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HDV7331679.1"
                     /translation="MKILVLNSGSSSIKFKFFDNKIVKASGLVEKIGEQNSKVVLKNT
                     LNNESFERELTINNHEEGLSIVNELFKESGILADLNALDGCGHRIVHGGRNLSEHCLV
                     DDYVLKEIDRVSIFAPLHNPAHLAGIKTMIKAAPSVANAAIFDTAFHRTMPDFAYMYA
                     LPYDFYDKHNIRRYGFHGTSHAYVSSRAAKFLQKDQNELNVISAHLGNGASVCAIEKG
                     KSMDTSMGFTPLEGLIMGTRCGDLDPAILPFVSHLKGLTIEEIDTLMNKKSGVYGICG
                     YNDFRDIEREIEQGNDKARLALDMFCYRLVKYIGSYFAVLPKTDAIIFTGGIGENDSL
                     VRQKVCERLAHLGIELDFELNKQRISGERMINHANSKVKVLVIPTDEELEIARITEEL
                     IGKN"
     gene            complement(4603..>7220)
                     /locus_tag="RJ239_001576"
     CDS             complement(4603..>7220)
                     /locus_tag="RJ239_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent DNA methyltransferase"
                     /protein_id="HDV7331680.1"
                     /translation="KNLSFKRDYKTLSVEHLGTIYEGLLSYFFEIANEDIYYVSYKEK
                     SKEIECYFDNYDFKILEKSKKVEKYTFYKKGQIYLKNSSNSRKSTASFYTPQSIANFL
                     IQSALKDKLNNENILKFKILDNACGSGHFLVGVLNAITHIVLSDFDHFTNLKELYEEE
                     KENILNYIKDFVQDYEVDESDILKRLLLKRIIYGVDLNPFSIELTKLSLWIDSFIFGT
                     PLSFIEHHIKCGNALINSNLSDFKDLIKQNSSNLFTNSITQEFEILQEVFEKLDNLKD
                     TNEEQIKQSKQIYQNEITPKLNKLNLYLNYINTLHFVNKEELQILKALSQDDIQNLSQ
                     NEQAKNIISKYQKEFNFFNYELEFPEITENQVFKGFDIIIGNPPWDKTKFSDSDFFPQ
                     YKSDYRSLIASKKKEIQDNLLAKDYIKQNYEKQKAYINDLNEYYKKAYPLNKGSGDGN
                     LFRLFVEKNLSLLKQDGNLAYVLPSALMFEDGSLILRKEILENKTLEYFYSFENNKAI
                     FIDVHRSYKFALMLIKNTQANHTHKIKMMFYKTDINSLKNKDEILTLNLKDIKKLSPT
                     HLALMELKDKQALEILRKSYNAFQNLSFDYIDFRRELDMTNDKDLFIEEFREGLLPLY
                     EGKMIHQFDANFSQATYFLEKAKFDERLKSKELYRAKKATGKELNPKLIKYDREFFRL
                     GYRKIASDTNERTLIASLLPKNCGGADSTYSNIPKQYVLKDDVICMDIVPYERILFVL
                     ALFNSLVVDFIIRNMVQINVSKSYLERIPLPQPSDEEIQNNEIYKTLAKNALLLQLYN
                     DQNHHFDELKQEFNIKNEEIPKTKKAYDILRAKNDLLVKELYGLSDDEFSYMISTFKV
                     LNEKQSEYITLLKTI"
BASE COUNT         2391 a          981 c         1211 g         2637 t
ORIGIN      
        1 acaaatcaaa gtaggaaatg ttttaatagg cggtgatgca cccatttcag ttcaatctat
       61 gctttttact aaaacaagag atatagaagg ttctttagaa caaatcaatc gtctttattt
      121 tgcaggagca aacatagtgc gtttggcgtg cttggatatg gctgatgcaa gggctttaaa
      181 agagattaaa gctaaaagtc ctctaccttt aatcgtagat attcatttta atcataattt
      241 ggctgtatat tgtgctgaat ttatcgatgg cgtgcgtata aatcctggca atataggctc
      301 taaagaaaat attaaagaag tggtaaaagc atgtaaagaa cggggtatcc ctatacgcat
      361 cggtgtaaat cacggctcca tagaaaaaca atttagtgat aaatttggtt atggtgtcga
      421 tgccatgcta gaaagtgcga tgtataatat caagctttta gaggatttag acttttttga
      481 tattaaaatt tccatgaaga cttcagatgc tcaaaaaact atagaagctt atgagagatt
      541 aagaccgctt tgtgattatc cttttcactt aggggtaact gaagcaggaa ctaaatttca
      601 tagcactgta aaaagttcta tagctttagg aaatttactt cttaaaggta taggcgatac
      661 tatgcgtgtt tctatgacgg gtgagcttga agaagaaatt cgtgtagcaa gagcgatttt
      721 gcaagatagt ggagtgcaaa aaagcggagt aaatatcatc tcatgtccaa cttgcggtag
      781 gattcaaagt gatttgttaa gcgcgattaa aatcgtagag gaaaaaacca agcatataaa
      841 agaaccttta aatatcagtg ttatgggttg tgtagtaaat gctttaggtg aagctaaggg
      901 cgctgatgtg gctatagcct ttgggaaaaa tcaaggactt gttataagac atggtgaagt
      961 tgtagctaaa ttaaaagaaa gtgaacttgt agatagattt ttagctgaag ttgaagatga
     1021 ggttaaaagt agggctgtaa aagaataaaa gccaagaagc aaggtttaac cttgctttta
     1081 gaatggccat atcgcttcta taactttgct accccaaggt tttcttgcgc ttctatccac
     1141 ttcaccttct gttttataaa gaattttagc atctgctata tatttactat ctatagtatt
     1201 gtcttgaccg atgtcataag gacgaataac accgcttaat tgtatgattt gtttctctcc
     1261 gttgattaaa agctctcttg agccttcgat aaaataatta ccatttgata aaattttaat
     1321 tacacgcgtt gaaattgtag tattgaaact ttcatttctg ctttgcgaac ccgttcctgt
     1381 gtagttgttt gaactattgg tttgaaagcc tatattagaa taagcattga ctttattaag
     1441 agcattagct accactcctg aacttcctgt taaagcacct ccgcctaaat ttgaggtatt
     1501 agttctactt gttgctttat tagcttgtgt gctttgagtg gtactttctt gtataacaac
     1561 tgtaactaaa tcatttacat tcatagcttt tttatctgaa aataaaggat tatccccttt
     1621 gccaaaaagc gatcctggtg cactttctat attattactt tgttttggtg caagttcttc
     1681 tacataagca ggtggtttca ttgaaatttg cggatcaacc gttgcagaac aaccaaaaaa
     1741 tgcaaacggt aacacataaa ataaaacttt tttcattttc gtcctttaaa atatgaattt
     1801 ttatttttct ttgttaaaat tagaaaaagc aaagagtgtt ccacatttat aaattcaagg
     1861 agaaaatgat ggcaaatctt tatttgatga gatctagaag tgatgagtta aatactatta
     1921 ttagtacaaa tttgcttaaa aattatagca aaatttacaa aaatatcgca atttattgcc
     1981 ctgtaatata catacatcgc gtccctgttt tgcagggttg gttggaagaa tttaatatca
     2041 atcaaaccgt aaaaagtgcc tatggtttta cctttagaga ggcaatggag gaatttagca
     2101 aagatcctca taattttttt aatgttattt tagaagaata cgaagagtta aaacgcaaat
     2161 acgattttgt gcttgtaaat agtttttgcg aatttggaat acttgatgga tttgatctta
     2221 gtataaaatt ggccaaaaat cttaatacac ctattgctgc tattatcaat gatgaagata
     2281 aacttatagc tcaaaaatat ttcgatcatg ctctagatgg tcgtaattat gttttgatta
     2341 atgaaaattt taattttgaa gaagtgcaaa aacttaaaga atatgatttt ataactcctc
     2401 atcgttttaa atatgaattg attaaacaaa gtataaaaaa taaaaaaacc gttgttttgc
     2461 cagaaagtaa tgatgagaga attttaaaag ctgctgaaat tttattgaaa agtaaagttg
     2521 ttgatcttat tttattgggt gatgaagaaa aaatcaagca agatagtgct aaattaagtc
     2581 ttgatttaaa tactatacgg attataaatc cactcaaatc agaatataat caagaatttg
     2641 cttctattct ttatgaagca agaaaatcta aaggtatgag tttagaagag gctaggaagc
     2701 tagttcaaga taaaacttat tttggaactt tacttataca cactggaaaa gctgatgcta
     2761 tggttagtgg agcatcaact actacggctg aaacgattcg ccctgcatta cagcttatta
     2821 aaactaaaga aggtattagt tccgtttcag gaattttctt tatgggactt gaagatcaag
     2881 ttttagcttt tgctgattgt gctgtaaatc caagcccaag tgctgagcaa cttgcaacta
     2941 gtgcctatgt aagtgctatg actgctaaat cttttggact tgaaccaaga atagctttgc
     3001 tttcttattc tagtggtgat agcggtaaag gagaaagcgt agatcttgta aaagaagcat
     3061 taaagattgc taaagaaaaa tatcctgagt tgaatataga tggtcctatg cagtttgact
     3121 gcgcttatga tccaaaaact gcagcaaaga aaatgccaaa ttctaagata gcaggtcatg
     3181 caaatgtgta tatttttcct gatcttaacg cagcaaatat ttgttacaaa gcagttcaaa
     3241 gaactgctaa tgctttagca atcggtccta ttttgcaagg tcttaaaaaa cctgttaatg
     3301 atttaagtcg tggatgtttg gtagatgata ttgtagatac cgtaatttta agtgcaatac
     3361 aagctcaata gaaaggaatg ataaatgaaa attttggttt taaattcagg ttcttcatcg
     3421 attaaattta aattttttga taataaaatc gttaaagcca gtggattagt agaaaaaatt
     3481 ggagagcaaa attcaaaggt tgtattaaaa aatactttaa ataatgaaag ttttgaaaga
     3541 gaattaacaa taaataatca cgaagaaggc cttagtatag ttaatgagct ttttaaagaa
     3601 tcaggaattt tagcagattt aaatgcactt gatggctgcg gtcatcgtat agttcatggg
     3661 ggaagaaatt taagcgagca ttgtttagta gatgactatg ttcttaaaga gatagatagg
     3721 gttagtattt ttgctccttt gcataatcct gcgcatttag caggtataaa aacaatgatc
     3781 aaagctgcac ctagtgttgc taatgcagct atttttgata cagcttttca tcgcactatg
     3841 cctgattttg cttatatgta tgctttgcct tatgattttt atgataagca taatattaga
     3901 agatatggtt ttcatgggac ttctcatgct tatgttagtt ctagagcggc aaaatttctt
     3961 caaaaagatc aaaatgaatt aaatgtcatc tctgctcatc ttggaaatgg tgcaagtgta
     4021 tgtgctatag aaaaaggtaa gagtatggat acttctatgg gctttactcc acttgaagga
     4081 cttattatgg gaacgcgttg tggagattta gaccctgcta ttttaccttt tgttagtcat
     4141 cttaagggtt taactataga agaaatagat acactgatga ataaaaaaag tggagtatat
     4201 ggaatttgcg gttataatga ttttagagat atagaaagag agatagaaca aggtaatgat
     4261 aaagcacgct tggctcttga tatgttttgt tatcgtcttg ttaaatatat aggatcctac
     4321 tttgctgtgt tgccaaaaac cgatgctatt atttttacag gtggtatagg agaaaatgat
     4381 agtttggttc gacaaaaagt atgcgagaga ttagctcatc ttggtatcga gttagatttt
     4441 gaacttaaca aacaaaggat ttcgggcgaa agaatgataa atcatgcaaa ttctaaagtt
     4501 aaagtgcttg ttattcctac agatgaagaa ttagaaatcg ctagaattac agaagaactt
     4561 atcggtaaaa attaaatttt aaaaactata taaatctttc atttatatag tttttagcaa
     4621 ggttatatat tcactttgct tttcatttaa aactttaaaa gtgcttatca tgtaagaaaa
     4681 ttcatcatca cttaaaccat aaagttcttt aaccaataaa tcattttttg ctcttaagat
     4741 atcataagct tttttagttt ttggaatttc ttcatttttt atattaaatt cttgttttag
     4801 ctcatcaaaa tgatgatttt gatcattgta aagctgtaaa agcaaagcat ttttagcgag
     4861 ggttttataa atttcattgt tttgaatttc ttcatcactt ggttgaggca ggggaattct
     4921 ttctaaataa gatttgctta cattgatttg caccatattt cttatgataa aatcaaccac
     4981 taaagaatta aacaaagcta aaacaaataa aattctttca taaggcacta tatccatgca
     5041 aattacatca tcttttaaaa catattgttt tggaatgtta ctataagtac tatcagctcc
     5101 accgcaattt tttggtaata aagaagctat caaagttctc tcatttgtat cacttgcaat
     5161 ttttctatat ccgagtctaa aaaattctct atcgtatttt attaatttag gatttaattc
     5221 tttcccagta gcttttttag ctctataaag ttctttactt tttaaacgct catcaaattt
     5281 agccttttct aaaaaataag tagcttggct aaaatttgca tcaaattgat gtatcatttt
     5341 accttcatat aagggtaaaa gtccttccct aaactcttct ataaacaaat ctttatcgtt
     5401 tgtcatatca agttctcttc taaaatctat ataatcaaaa gacaagtttt gaaaagcatt
     5461 ataagatttt cttagaattt ctaaagcttg cttgtctttt aactccatta aggctaggtg
     5521 agttgggctt agctttttga tatcttttaa atttagagtt aaaatttcat ctttgttttt
     5581 taatgagttt atatctgttt tataaaacat cattttgatt ttatgagtgt gatttgcttg
     5641 cgtgtttttt ataagcataa gagcaaattt atagcttcta tgaacatcta taaagatagc
     5701 tttgttgttt tcaaaactat aaaaatactc taaagtttta ttttctaaaa tttcttttct
     5761 taaaattaag cttccatctt caaacatcaa agcactagga agtacataag ctaaatttcc
     5821 atcttgtttt aaaagagaaa gatttttttc tacaaaaaga cgaaataaat ttccatctcc
     5881 actgcctttg tttaaaggat aggctttttt ataatactcg tttaaatcat ttatatatgc
     5941 tttttgtttt tcgtaatttt gctttatata atcttttgct agcaaattgt cttgaatttc
     6001 ttttttcttg ctagcgatta agcttctata atcgcttttg tattgtggaa agaaatcgct
     6061 atcactaaat ttagttttat cccaaggtgg attacctata atgatatcaa agcctttaaa
     6121 gacttgattt tctgtgattt caggaaattc taactcatag ttaaagaagt taaattcttt
     6181 ttgatatttg ctaatgatgt tttttgcttg ttcattttgg cttaaatttt gtatatcatc
     6241 ttggcttagg gcttttagaa tttgtaattc ttctttgttg acaaaatgaa gcgtgttgat
     6301 atagtttaga tataaattta gtttattaag ttttggtgtg atttcatttt gatagatttg
     6361 tttagattgt ttgatttgtt cttcgttggt atcttttagg ttgtcaagtt tttcaaatac
     6421 ttcttgtaaa atttcaaatt cttgtgttat ggaatttgta aaaaggttgc ttgagttttg
     6481 ttttatcaaa tctttaaaat cacttagatt agaatttatc aaagcattgc cgcactttat
     6541 gtggtgttct ataaaagaaa gtggggttcc aaagataaaa ctatctatcc aaaggctaag
     6601 tttagtaagc tctatgctaa aagggtttaa atccacccca taaataatgc gttttagtaa
     6661 aagtcgtttt aaaatatcac tctcatctac ttcatagtct tgcacaaaat cttttatata
     6721 gtttaaaata ttttcttttt cttcttcgta aagttctttt aaatttgtaa aatgatcaaa
     6781 atctgataaa acaatgtgtg taatagcatt taaaactcca actaaaaaat gtccactacc
     6841 gcaagcattg tctagtattt taaatttcaa aatattttca ttgtttagtt tgtcttttaa
     6901 agcactttgg attaaaaaat tagctatgga ttgaggtgtg taaaagcttg ctgttgattt
     6961 tcttgaatta ctagaatttt taagataaat ttgtcctttt ttataaaagg tgtatttttc
     7021 tacttttttt gatttttcta aaattttaaa atcataatta tcaaaataac attctatttc
     7081 ttttgatttt tctttataac ttacatagta aatatcttca tttgctattt caaaaaaata
     7141 agaaagcaag ccttcataaa tcgtgcctaa atgttctaca cttaaagttt tgtaatctct
     7201 tttaaagctt agatttttat
//
LOCUS       DAPIVO010000073         7089 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.073, whole genome shotgun sequence.
ACCESSION   DAPIVO010000073 DAPIVO010000000
VERSION     DAPIVO010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7089)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7089)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7089
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.073"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..556
                     /locus_tag="RJ239_001577"
     CDS             <1..556
                     /locus_tag="RJ239_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331681.1"
                     /translation="SVLSSCLLASALSAVSFKEDSLKISFEGYKTKDMIGTKGEFKNV
                     EYKFSKNIKDLASYLKGAKATIKPSNAFMGEGNDIITNNITKVFFPALLGDTDIKVVF
                     QDVIAGENKGVISAKITMDKKSTIVPLTYTIKDNKFEAKGQLDLHTFKNGSKALKALS
                     DVAAGHGGISWPLVDISFNADLAE"
     gene            complement(572..1138)
                     /gene="rsmG"
                     /locus_tag="RJ239_001578"
     CDS             complement(572..1138)
                     /gene="rsmG"
                     /locus_tag="RJ239_001578"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HDV7331682.1"
                     /translation="MIFKDYDFLQNYDLKNFEEKVKIYKELLSKFNRIHNLTHLKNID
                     ENIFDSIKILDFYDFSKAKNIADIGSGAGFPVVFLAFLLQSNFHLFEPNPKKAAFLRT
                     LKIECELPNLHIYKEKVQEYKNTFKADIITSRALMDVKPLLEICKNLKDENTVFILWK
                     GSEIYQELENIKDYEIFENNLRRYCILK"
     gene            complement(1139..1699)
                     /gene="ribA"
                     /locus_tag="RJ239_001579"
     CDS             complement(1139..1699)
                     /gene="ribA"
                     /locus_tag="RJ239_001579"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HDV7331683.1"
                     /translation="MEIKISEIANLPSKWGNFQMQSFKENDKEHLCIFKNTPKDTLNL
                     RIHSECLTGDALGSLKCDCGEQLEFSLKYIEKNGGMVIYLRQEGRGIGLFNKVNAYAL
                     QDKGFDTIKANHQLGFKADERTYEIVEFILKHYEISKVNLLTNNPEKLDSIKEKIITR
                     IPILIEPNRFNVEYLNIKQTQMGHLK"
     gene            1757..2740
                     /gene="hemB"
                     /locus_tag="RJ239_001580"
     CDS             1757..2740
                     /gene="hemB"
                     /locus_tag="RJ239_001580"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HDV7331684.1"
                     /translation="MFKRFRRLRLNENLRSMVRENSLSVNDLIYPLFVVNGTGIKKEI
                     SSMPDVFQMSLDEILKECQNVVNLGIKAIILFGVLENEKKDSCGSDALDDEGLVARSI
                     REIKKNFPDLFIISDLCFCEYTDHGHCGIIDPKIKSVDNDATLEISAKQALVHARAGV
                     DMIAPSGMMDGVITTLRKALDKEGFENLPIMAYSTKFASSYYGPFRDVAESAPSYGDR
                     KSYQMDFANGKEALEESLEDEAQGADILMVKPALAYLDVVKEISLHSNLPLCIYNVSG
                     EYAMLKAAKNAGVIDYEKVLYETIIAFKRAGAKLIITYHAKELAKMLKGEK"
     gene            2737..3657
                     /gene="argF"
                     /locus_tag="RJ239_001581"
     CDS             2737..3657
                     /gene="argF"
                     /locus_tag="RJ239_001581"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDV7331685.1"
                     /translation="MKHFLTLRDFSKEEILSLVNHASELKKEPKKLLQDKTLAMIFEK
                     NSTRTRMAFELAITELGGKALFLSSNDLQLSRGEPVKDTARVIGAMVDFVMMRVNKHE
                     TLLEFARYSKAPVINALSELYHPTQVLGDLFTIKEWNKMQNGIAKVAFIGDSNNMCNS
                     WLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVI
                     TDTWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCLPAYRGYEVSEEIFEK
                     HADVIFEEARNRLYVVKALLCFLDNQRGRE"
     gene            3654..4145
                     /locus_tag="RJ239_001582"
     CDS             3654..4145
                     /locus_tag="RJ239_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2603 domain-containing protein"
                     /protein_id="HDV7331686.1"
                     /translation="MKELEKYSTCLKRIDEFSQNLGIKKKDRTIFKMKQSENENEKCL
                     VLENGSFDSPEPWFVIDENDEIHTLLSLQSLKNILESLKQSQKENFELRLEKAIYQQI
                     PVDFNDVWTVAMDEIKQKAQNGTMEVSIDLEKLISKIKQEHPNLFVDMQAMIERVNQN
                     ERL"
     gene            4132..5487
                     /gene="hemN"
                     /locus_tag="RJ239_001583"
     CDS             4132..5487
                     /gene="hemN"
                     /locus_tag="RJ239_001583"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HDV7331687.1"
                     /translation="MRDYKAFVKYSKAGPRYTSYPTAVEFNANFKYEEYIEILKKQDR
                     SLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVVQM
                     HFGGGTPTFFSAKQLQSLILKIRSVFGNFSKDAEISCEIDPRFLNEEQAIVLTQNGFN
                     RISFGVQDFDEKVQKEIHRIQSFELTQNALNLVRNKGIKSVNMDLIYGLPYQNLQSFT
                     QTLEKVMLLNPDRLAIFNYAHVPWLKKNMRKFDENTLPSPDVKLEILEFCEKFLSKNG
                     YKMIGMDHFAKENDELFKALENGTLHRNFQGYTTKGGADLVGVGLTSIGEGQRHYAQN
                     FKDMSSYEAALDRGVLPFERGVILSDDDELRKAVIMELMANFKLDIKSIEKEFSIDFK
                     EYFKEDLKALEEYKDFVNFDENFIKVNETGVLLIRNIAMCFDAYMKNISEDKKVFSKT
                     V"
     gene            5489..6754
                     /locus_tag="RJ239_001584"
     CDS             5489..6754
                     /locus_tag="RJ239_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HDV7331688.1"
                     /translation="MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLTAYK
                     EGSLELDKEAKKVFESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKKFGIAWYKKLIF
                     FFLRRRKILDLVAKLGYVFQSCAFKIQNENENTGMKARFSMPFVKKGRLLTSFNKKSF
                     LNSNPKFINNDGEKTIGFFVGCLANYFYIDTANAVLKITKELKINVDLMKEQVCCGAP
                     QFFTGDFKSVEVLAKKNIEYFEKKLEKLDAIIVPEATCSAMLKIDYEHFFIMQNDLDW
                     AKRAKCVSSKIYMASEYFYKFTSLEEILKTKNKFNYSITYHDPCHARKMQGVFKEPRE
                     LLKTNYHFVEMSNSNTCCGFGGVSMQTDYYDRALSVGLKKAQMIDESKASVVSAECSA
                     CRMQISNALEQNSSKVVFASPLELIAKAL"
     gene            6751..>7089
                     /locus_tag="RJ239_001585"
     CDS             6751..>7089
                     /locus_tag="RJ239_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331689.1"
                     /translation="MMMKIVFKGKSSEYEIQRSCFCVDAFVIKDKIEERDGVDFITSN
                     VDLLEFSDDSFTFEEIVKHFNICDTEDMIIVEDFDMKSNKDNQNQEDDIEHNILKSEK
                     IIHENTKQTSM"
BASE COUNT         2531 a          849 c         1329 g         2380 t
ORIGIN      
        1 aagtgtttta agttcttgct tgttagcttc ggctttaagt gctgtatctt ttaaagaaga
       61 tagtttaaag atttcttttg aaggatataa aactaaagat atgataggaa caaaaggtga
      121 atttaaaaat gtagaatata aattttctaa aaatataaag gatttggcaa gttatcttaa
      181 aggcgctaaa gctaccataa agccaagcaa tgcttttatg ggtgaaggca atgatattat
      241 aaccaataat atcacaaaag tatttttccc tgctttattg ggagatacgg atattaaagt
      301 tgtttttcaa gatgtgattg cgggtgaaaa taaaggcgtt atttcagcaa aaattactat
      361 ggataaaaaa agtactattg tacctttaac ttataccatc aaagataata aatttgaagc
      421 taaaggacaa cttgatttgc atacttttaa aaatggttct aaagcattaa aagcattaag
      481 cgatgttgct gcaggacatg gtggaatttc ttggccttta gtggatatca gttttaatgc
      541 tgatttagca gaataaaaag tagccttagg gctactttaa aatacaatat cttcttaaat
      601 tattttcaaa aatttcataa tcttttatat tttcaagttc ttgataaatt tcactacctt
      661 tccataaaat aaaaactgta ttttcatctt ttagattttt acaaatttca agcaaaggct
      721 tgacatccat taaggctctt gaagtgatga tatcagcttt aaaggtattc ttgtattctt
      781 gaactttttc tttgtaaata tgtaaatttg gaagttcaca ttctattttt aatgtccgca
      841 aaaaggcagc ttttttggga ttgggttcga aaagatgaaa attgctttgc agtaaaaaag
      901 ctaaaaatac aactggaaat cctgcgccac ttcctatatc ggcaatattt tttgctttag
      961 aaaaatcata aaaatctaaa attttaatac tatcaaagat attttcatct atatttttta
     1021 aatgagtaag attgtgaatg cggttaaatt tagataataa ttctttataa atttttacct
     1081 tttcttcaaa gttttttaaa tcgtagtttt gcaaaaaatc ataatcttta aaaatcattt
     1141 atttaagatg tcccatttga gtttgtttta tgtttaaata ctctacatta aaacgattag
     1201 gttctattaa aatcggtatg cgtgtgatga ttttttcttt gatagaatct agcttttcag
     1261 ggttatttgt gagtaaatta accttagaaa tttcatagtg tttgagtata aattctacaa
     1321 tttcataagt tctctcatcg gctttaaagc caagctgatg atttgcttta atcgtatcaa
     1381 aacctttatc ttgtaaagca taagcattaa ccttgttaaa aagccctata ccccttcctt
     1441 cttgtctaag ataaatcacc attccgccat tcttttctat atattttagc gaaaattcaa
     1501 gttgttctcc gcagtcgcat tttaaacttc ctaaagcatc tcctgttaag cactctgaat
     1561 gaattcttag attgagtgta tcttttggag tgtttttaaa tatgcataaa tgttctttat
     1621 cgttttcttt gaaactttgc atttggaaat ttccccattt gctaggtaaa ttcgcaattt
     1681 ctgaaatttt tatttccatt tactactctc tataatcaaa tttatgttaa gattttagca
     1741 aaaaaaggac aaaaaaatgt ttaaaagatt tagaagatta aggcttaatg aaaacttaag
     1801 atctatggta agggaaaatt ctttaagtgt aaatgatttg atttatccgc tttttgtggt
     1861 taatggaacg gggataaaaa aagaaatttc ttctatgcct gatgtgtttc aaatgagttt
     1921 agatgaaatt ttaaaagagt gtcaaaatgt agttaattta ggcattaaag ccattatact
     1981 ttttggtgtt ttagaaaatg agaaaaaaga cagttgtgga agcgatgctt tagatgatga
     2041 agggcttgtt gcaagaagta taagagagat taagaaaaat tttccagatc tttttataat
     2101 cagtgatctt tgtttttgcg aatacacaga tcacgggcat tgtgggatta tcgatccaaa
     2161 aataaaaagc gtagataatg atgcaacttt agaaatttca gccaagcaag ccttagttca
     2221 tgcaagagca ggggtagata tgatagcacc tagtggaatg atggatggtg ttatcactac
     2281 tttgcgcaaa gctttagata aggaaggttt tgaaaatttg cctataatgg cgtattctac
     2341 taaatttgca tcaagttatt atgggccatt tcgagatgta gcagagtcag ctccaagtta
     2401 tggagataga aaaagctatc aaatggattt tgctaatggt aaagaagctt tagaagaaag
     2461 cttagaggat gaagcacaag gagctgatat tttaatggta aaacctgctc ttgcttatct
     2521 tgatgtggtt aaagaaatat cccttcattc taacttgcct ttgtgtattt ataatgtaag
     2581 cggagagtat gctatgttaa aggcagctaa aaatgcagga gtgattgatt atgaaaaagt
     2641 tttgtatgaa actataatag cttttaaaag agcaggggca aagcttatca tcacttatca
     2701 tgctaaagaa ttagctaaaa tgttaaaagg agaaaaatga aacatttttt aactttaaga
     2761 gatttttcta aggaggaaat tttaagcctt gtaaatcatg ctagcgagct taaaaaagag
     2821 cctaaaaaac ttttacaaga taaaacttta gcaatgattt ttgagaaaaa ctctacaaga
     2881 acaagaatgg catttgaatt agccataaca gagcttggcg gaaaggcttt gtttttaagc
     2941 agcaatgatt tacaacttag tcgtggtgag cctgtaaagg atacagctag ggtgataggg
     3001 gcgatggttg attttgtgat gatgagggtc aataaacatg aaactttact cgaatttgca
     3061 agatattcta aagctcctgt gatcaatgct ttaagcgagc tttatcatcc tactcaggtt
     3121 ttaggggatt tgtttactat caaagaatgg aataaaatgc aaaatggtat agcaaaagtt
     3181 gcttttatcg gagatagtaa taatatgtgc aattcttggc ttattacggc tgcgattttg
     3241 ggctttgaaa ttagtatagc tatgccaaaa aactataaaa ttagccctga aatttgggaa
     3301 tttgctatga aacaggcttt gatttcagga gctaaaattt ccttaggcta tgataaattt
     3361 gaagccttaa aggataaaga tgtagtcatt accgatactt gggtttccat gggcgaagag
     3421 aatgaaaaag aacgcaagat taaagaattt gaaggattta tgatcgatga aaaggctatg
     3481 agcgttgcca ataaagacgc gatattgctt cattgtttgc ctgcttatag gggttatgaa
     3541 gtgagtgaag aaatttttga aaaacatgca gatgtgattt ttgaagaagc aagaaatcgc
     3601 ctttatgtgg taaaagcctt gctttgcttt ttggataatc agagaggaag agaatgaaag
     3661 agctagaaaa gtatagcact tgcttaaaac gcattgatga atttagtcaa aatctaggaa
     3721 taaagaaaaa agatagaacg atttttaaaa tgaagcaaag cgagaatgaa aacgaaaaat
     3781 gtttagttct tgaaaatgga agttttgatt ctcctgagcc ttggtttgtg atcgatgaaa
     3841 acgatgaaat tcacactttg ctttctttac aaagtcttaa gaatatactt gaaagtttaa
     3901 aacaaagtca aaaagagaat tttgaattgc gtttagaaaa ggcgatttat caacaaattc
     3961 ctgtagattt taacgatgtt tggacggttg ctatggatga gatcaagcaa aaggcgcaaa
     4021 atggtaccat ggaagttagt attgatcttg aaaaattaat ttctaaaatc aaacaagagc
     4081 atccaaattt atttgtagat atgcaagcga tgatagaaag ggtaaaccaa aatgagagat
     4141 tataaagctt ttgtaaaata ctctaaagca ggaccacgct acacttctta tcctacagca
     4201 gtagagttta atgcaaattt caaatacgaa gaatatatag aaattttaaa aaaacaagat
     4261 agatctttat cgctttattt tcatttacca ttttgtagga gtgcttgtta tttttgtggt
     4321 tgcaatgtca tctatactgc aaaagaagag agtaaagaaa ggtatttaac ttatattttt
     4381 aaagagcttg atattttaag taccatttta gatactaaaa gagaagtggt gcaaatgcac
     4441 tttggtggcg gaactccaac tttttttagc gctaaacaac ttcaaagttt gattttaaaa
     4501 atcagatctg tttttggaaa tttttctaaa gatgcagaga ttagctgtga gatcgatccg
     4561 cgttttttaa atgaggaaca agccatagtt ttaacgcaaa atggctttaa tcgtattagc
     4621 tttggagtgc aggattttga tgaaaaagtt caaaaagaaa ttcatcgcat ccagtctttt
     4681 gaattaacac aaaatgcttt aaatcttgta agaaataaag gcataaagtc tgtaaatatg
     4741 gatttaattt atggtttgcc ttatcaaaat ttacaaagct ttacacaaac tttagaaaaa
     4801 gttatgcttt taaaccctga tcgtttggcg atttttaatt acgctcatgt gccttggctt
     4861 aagaaaaata tgagaaaatt tgatgaaaat accttgccaa gtcctgatgt taagcttgaa
     4921 attttagaat tttgtgagaa atttttaagc aaaaatggtt ataaaatgat aggaatggat
     4981 cattttgcaa aagaaaatga tgagcttttt aaagctttag aaaatggaac tttacataga
     5041 aatttccaag gttataccac caaaggcggt gctgatttag tcggtgttgg gcttacaagt
     5101 ataggcgaag gacaaagaca ttatgcacaa aattttaaag atatgtcaag ttatgaagct
     5161 gcattagata gaggagtttt accttttgaa agaggtgtga ttttaagcga tgatgatgag
     5221 cttagaaaag cagtgattat ggagttaatg gcaaatttta agcttgatat taagtcaata
     5281 gaaaaagaat tttccattga ttttaaagag tattttaaag aggatttaaa agctttagaa
     5341 gaatacaaag attttgttaa ttttgatgaa aattttatca aagtcaatga aacaggtgtt
     5401 ttgcttataa gaaatattgc tatgtgtttt gatgcttata tgaaaaacat tagtgaagat
     5461 aaaaaagtat tctcaaaaac ggtgtaagat gaaatttagt caaataagtg atgcttgcgt
     5521 taaatgtggc aaatgtatac ctgtttgtac tatacatgaa gaaaatcgcg atgaaattac
     5581 tagtccaaga ggatttttag atcttttaac tgcttataaa gagggaagtc tagagcttga
     5641 taaagaagct aagaaagttt ttgaatcttg ttttttatgc accaattgtg ttgaagtatg
     5701 tccgagtaaa ttaagagtag ataatgccat agaagaagtt cgttatgata tagctaaaaa
     5761 atttggtata gcttggtata aaaaacttat ttttttcttt ttaagaagac gcaaaatttt
     5821 agatttggta gctaagcttg gctatgtgtt tcaaagttgt gcgtttaaaa ttcaaaatga
     5881 gaatgaaaat acaggtatga aggcaagatt ttccatgcct tttgttaaaa agggaagatt
     5941 acttacaagt tttaataaaa aaagtttctt aaattctaat ccaaaattta tcaataatga
     6001 tggagaaaaa acaataggtt tttttgtagg ttgtttggcg aattattttt acatagatac
     6061 ggctaatgcg gtgcttaaaa tcactaagga attaaaaatc aatgtggatt tgatgaaaga
     6121 acaagtatgt tgtggagcgc cgcaattttt tacgggtgat tttaaaagtg ttgaagtttt
     6181 ggctaaaaaa aatattgagt attttgaaaa aaaattagaa aaattagatg ctattatagt
     6241 tcctgaggcc acttgttcgg ctatgttaaa gatagattat gaacattttt ttataatgca
     6301 aaatgattta gactgggcaa aacgcgcaaa atgtgtgtca tctaagatat atatggctag
     6361 cgagtatttt tataaattta cttctttgga agaaatttta aaaacaaaaa ataaatttaa
     6421 ttatagcatt acttatcacg atccttgcca tgcaagaaaa atgcaagggg tttttaaaga
     6481 gccaagagaa cttttaaaaa caaattatca ttttgtagaa atgagtaatt ctaatacttg
     6541 ttgcggtttt ggcggggtga gtatgcaaac ggattattat gatagagctt taagtgtagg
     6601 gcttaaaaaa gcacaaatga tcgatgaaag taaggctagt gtggtaagtg ccgagtgttc
     6661 agcttgtaga atgcaaattt caaatgcatt agaacaaaat tcaagcaagg ttgtttttgc
     6721 tagtccttta gaacttatag caaaagcttt gtgatgatga agatagtatt taaaggcaaa
     6781 agttctgaat atgaaattca aagatcgtgc ttttgtgttg atgcttttgt gattaaagat
     6841 aagattgaag aacgagatgg tgttgatttt atcacttcaa atgtagatct tttggaattt
     6901 agtgatgaca gttttacttt tgaagaaatt gtaaaacatt ttaatatttg tgatactgaa
     6961 gatatgatta tcgttgaaga ttttgacatg aaatcaaaca aagataatca aaaccaagaa
     7021 gatgatatag aacacaacat cttaaaatcc gaaaaaataa tacatgaaaa cacaaaacaa
     7081 acaagtatg
//
LOCUS       DAPIVO010000074         7002 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.074, whole genome shotgun sequence.
ACCESSION   DAPIVO010000074 DAPIVO010000000
VERSION     DAPIVO010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7002)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7002)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7002
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.074"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            66..350
                     /locus_tag="RJ239_001586"
     CDS             66..350
                     /locus_tag="RJ239_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HDV7331690.1"
                     /translation="MAVKITDICIACGSCIDECPVNAIVDDTNNPEGEDRYYVYANKC
                     VECVGHNDQPACASACPTDGCIVWSAVESGQPSRDNIGADMRSGDTPVFA"
     gene            463..876
                     /gene="ndk"
                     /locus_tag="RJ239_001587"
     CDS             463..876
                     /gene="ndk"
                     /locus_tag="RJ239_001587"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HDV7331691.1"
                     /translation="MEKTLSIIKPDAVKKGVIGKILDRFESNGLRIAAMKKVQLSKEQ
                     AENFYAVHKERPFFKDLVEFMISGPVVVSILEGEGAVLKNRDLMGATNPKEAKAGTIR
                     ADFAESIDANAVHGSDSLENAKIEIEFFFKPNEIC"
     gene            877..1230
                     /locus_tag="RJ239_001588"
     CDS             877..1230
                     /locus_tag="RJ239_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331692.1"
                     /translation="MKIPFSKINTKEYPFKLNLENIIFEGNLVKINPKLVKINAIMQG
                     FIYRPCDSCGTELELEIKENLELFASDGIFKDEANELSNTIEFFDGHIDLIEVAISEL
                     EAYLSDYFYCINCNN"
     gene            1254..1400
                     /gene="rpmF"
                     /locus_tag="RJ239_001589"
     CDS             1254..1400
                     /gene="rpmF"
                     /locus_tag="RJ239_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HDV7331693.1"
                     /translation="MAVPKRRVSKTRAAKRRTHYKVSLPMPIKDKDGSYKMPHRANPT
                     TKEY"
     gene            1406..2392
                     /gene="plsX"
                     /locus_tag="RJ239_001590"
     CDS             1406..2392
                     /gene="plsX"
                     /locus_tag="RJ239_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HDV7331694.1"
                     /translation="MINIAIDAMGGDFGEKPIIEGVLKALETKPFNAILVGNSKILKP
                     LIPKKLEQYIQYEEASEIFSMNGNATDALKNKETTIYKAINLLKEKKVDAVVSAGHSG
                     ASMSLATLKLGRLKGISRPAIATLMPNIVNKTLLLDVGANTDCKAENLFQFAIMGEVY
                     AREIMQIQKPRLALLSNGEEECKGNELTKESHQLMKKIPNFIGNAEGRDIFNGEIDVL
                     VCDGFDGNVILKACEGVATAIFQLLKNEVKQSFISKIGALLMKPSFKKLKKHTDWQEY
                     GGAPLLGVNGCVIISHGKSDSRAIKNAIFQAINFSQSHINKFIENELGKYNA"
     gene            2385..3359
                     /locus_tag="RJ239_001591"
     CDS             2385..3359
                     /locus_tag="RJ239_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HDV7331695.1"
                     /translation="MLKASLKSIASYIPEKILSNADLEKMVDTTDEWITRRTGIKERR
                     IASENENTSDLGTKAALKAIERANLKPEDIDAILVATLSPDYFTMPSTACKIASNLGL
                     VNISAFDISAACSGFIYLLEQAKALVESGLKKNVLIIGAEKTSSIMDYNDRSICILFG
                     DGAGAGVVSLDNENHILDVHTASNGNYGDLLMTQRSQKSSLCQTLSMQMKGNEVFKIA
                     VNTLSNDVVEILAKNNILAQEIDLFIPHQANLRIIKAVQEKLNLSDEKCVITVQKYGN
                     TSAASIPMAMNDAYEEGRLKKGNLILLDAFGGGFTWGSALLKFGGENF"
     gene            complement(3356..3706)
                     /locus_tag="RJ239_001592"
     CDS             complement(3356..3706)
                     /locus_tag="RJ239_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDV7331696.1"
                     /translation="MIKRFDECDRMSQIIVFDKYFKTAGQVAFEPSGDIKKQTKEALA
                     ELDALFEKIGANKGDLIQIQIWLANMQDFDAMNEIYDAWIKNYPKPVRACVGSALAEG
                     YLVEIQAFGKLREN"
     gene            complement(3703..4779)
                     /gene="serC"
                     /locus_tag="RJ239_001593"
     CDS             complement(3703..4779)
                     /gene="serC"
                     /locus_tag="RJ239_001593"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HDV7331697.1"
                     /translation="MRKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKV
                     FEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLALNGVCEYANTGVWTK
                     KAIKEAQILGVNVKTVASSEESNFDHIPRVEFSDNADYAYICSNNTIYGTQYQNYPKT
                     KTPLIVDASSDFFSRKVDFSNIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPS
                     MLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDL
                     SNGFYKGHADKKDRSLMNVSFNIAKNKDLEPLFVKEAEEAGMIGLKGHRILGGIRASI
                     YNALNLDQVKTLCEFMKEFQGKYA"
     gene            complement(4789..5952)
                     /locus_tag="RJ239_001594"
     CDS             complement(4789..5952)
                     /locus_tag="RJ239_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HDV7331698.1"
                     /translation="MTPTELNLKAKALLETHFDDIVLSGEISKITLHGSGHWYFDLKD
                     ERSSIACAMFKGANLKVGFKPAVGDFLELCGSVSLYPESGRYQFIATSMKKAGFGDLE
                     AQFLALKERLQKEGLFDPRFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAK
                     IYIFDALTQGNNAPFSLIQALKKADDMDLDVLIIARGGGSREDLFCFNDENLAREIFK
                     AKTPIISAIGHEIDYVISDFVADFRAPTPSAAIDTLFYSKLDIEQSLDLMEEKLMQLW
                     NYKIQNYENLLLNLSKFFKFNSLPKIIDEKIKQSHNIEKQLNHLLANQMRYNELKLDK
                     LQNAYLQHENFFNKSKKFICIRKNGKIANLEDLKSDDIVILSSQTSQKEAKIL"
     gene            complement(5949..6656)
                     /gene="ubiE"
                     /locus_tag="RJ239_001595"
     CDS             complement(5949..6656)
                     /gene="ubiE"
                     /locus_tag="RJ239_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HDV7331699.1"
                     /translation="MQKQEKIIEMFNQIAPTYDKANRILSFGADVAWRKKACQRVMSL
                     YLKKDLKIADIACGTGDMIEIWQESALKMEKNILNIKGIDPSSGMLNVAKEKFPNVEF
                     IKAGAQNLPLESQSLDILSISYGIRNVVERQKALSEFARVLQKDGILVVLEFTKREKG
                     GFIAACRDFYLKNILPSIGGIISKNKSAYEYLPNSIEGFLSKKEFILELKNAGFEMLD
                     YKSFSFGVSSMFIAKKL"
     gene            complement(6659..>7002)
                     /locus_tag="RJ239_001596"
     CDS             complement(6659..>7002)
                     /locus_tag="RJ239_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331700.1"
                     /translation="FDFFIKENSFYEGDCKDRFFKQLVALELRKKIILFRKNILKNFD
                     LELFENSFFELAIFLEYFYHFLEIKNLNKLYEKYSKDRDKNIFSKIINNKNKFCKLLK
                     KSSKNLKIYKG"
BASE COUNT         2459 a         1119 c         1009 g         2415 t
ORIGIN      
        1 atttacttta tttaagaatt ttatgctaaa atcttttaaa tcttaatatt aaataaggag
       61 aaaaaatggc tgtaaaaatt acagatatat gtattgcttg tggttcttgt attgatgagt
      121 gtccagtgaa tgctatcgtt gatgatacta acaatccaga aggtgaagat agatattatg
      181 tctatgcaaa caaatgcgtt gaatgcgtag gacataatga tcaaccagct tgtgctagtg
      241 cttgcccaac agatggatgt atagtttgga gtgctgtaga atcaggacaa ccaagtcgtg
      301 ataatattgg tgctgatatg agaagtgggg acactccagt ttttgcataa ttttaaaaaa
      361 ttaaaaagct agagattcct agctttttaa tttaatttaa ctttctttaa acaaattcaa
      421 gtataatttt aagctttatt aaaataagga gttattacaa agatggaaaa aactttatct
      481 ataattaaac ctgatgctgt taaaaaaggt gttataggaa aaattttaga tcgttttgaa
      541 agcaatggat taagaatcgc tgcaatgaaa aaagttcaac ttagtaaaga acaagctgaa
      601 aatttttatg ctgttcataa agaaagacct ttttttaaag acttggttga atttatgatt
      661 agcggtcctg ttgttgtttc tatactagaa ggagaaggtg ctgtattgaa aaatagagat
      721 ttaatgggag caacaaatcc taaagaagct aaagcaggaa caattagggc tgattttgct
      781 gagagtattg acgctaatgc tgttcatgga agcgatagct tagaaaatgc aaaaatagaa
      841 attgaatttt tctttaaacc aaatgaaatt tgctaaatga aaatcccttt ttctaagatt
      901 aatacaaagg aatatccttt taaacttaat cttgaaaata ttatttttga gggaaattta
      961 gtaaaaataa atcctaagct tgttaaaata aatgctatta tgcaaggttt tatctataga
     1021 ccttgtgata gttgtggaac tgagttagaa cttgaaatta aagaaaattt agaacttttt
     1081 gcaagtgatg gtatttttaa agatgaagca aacgaattga gcaatactat agaatttttc
     1141 gatggacata ttgatttaat agaagttgct atcagcgagc ttgaagctta tttgagtgat
     1201 tatttttatt gcataaattg caataattaa ttaaatttta taaaggagaa aaaatggcag
     1261 taccaaagag aagagtgagc aaaactcgtg cagctaaacg cagaactcac tataaagtta
     1321 gtcttcctat gcctataaaa gacaaagatg gaagctacaa aatgcctcac cgtgcgaatc
     1381 caacaactaa ggaatattaa aatcaatgat taacattgcc attgatgcaa tgggtggtga
     1441 ttttggagaa aaacccatta tagaaggcgt tttaaaggca ctagaaacaa aaccttttaa
     1501 cgctatctta gtgggaaatt ctaaaattct aaaaccttta ataccaaaaa aattagaaca
     1561 atatatacaa tacgaagaag ctagtgaaat tttttcgatg aatggaaatg ccacagatgc
     1621 tttaaaaaat aaagaaacaa ccatatacaa agctattaat ttattaaaag aaaaaaaagt
     1681 agatgctgta gtttcagcgg gtcatagtgg agcaagtatg tctttggcta ccttaaagct
     1741 tggaagactt aaaggtattt caagacctgc tattgccact ttaatgccaa atatcgttaa
     1801 caaaacttta cttttggatg ttggagctaa tacagattgt aaagctgaaa atttatttca
     1861 atttgccata atgggtgaag tttatgctag agaaatcatg caaattcaaa aaccacgcct
     1921 tgctttactt tctaatggtg aagaagaatg caaaggtaat gaacttacca aagaaagtca
     1981 tcagcttatg aaaaaaattc caaattttat aggtaatgct gaaggtagag atattttcaa
     2041 tggtgaaata gatgttttag tctgcgatgg ttttgatgga aatgttatct taaaggcttg
     2101 tgaaggtgtg gcaacagcta tttttcaact tctaaaaaac gaagtaaagc aatcttttat
     2161 ttctaaaata ggtgctttac ttatgaagcc atcttttaaa aaattaaaaa aacacacaga
     2221 ttggcaagaa tatggcggag caccccttct tggagttaat ggctgcgtga tcataagtca
     2281 tggaaaaagc gattctagag ctattaaaaa tgcaattttt caagctataa attttagcca
     2341 atctcatatc aataaattta tagaaaatga acttgggaaa tacaatgctt aaagccagtc
     2401 ttaaaagtat agcttcttat attccagaaa aaattttaag caatgctgat cttgaaaaaa
     2461 tggtagatac caccgatgaa tggatcacta gacgcacagg tattaaagaa aggcgcattg
     2521 ctagtgaaaa tgaaaatact agcgatttgg gcacaaaagc tgcattaaaa gccatagaaa
     2581 gagcaaattt aaaacctgaa gatattgatg cgattcttgt agctacttta agtcctgatt
     2641 attttactat gccttcaacg gcttgtaaaa ttgcttcaaa tttaggactt gtaaatatta
     2701 gcgcttttga tatttcagca gcttgttctg gttttatcta tttgcttgaa caagctaaag
     2761 ccttagtaga aagtggtttg aaaaaaaatg ttttaatcat aggagctgaa aaaacaagtt
     2821 caattatgga ttacaatgac agaagtattt gcatactctt tggagacggt gcaggtgctg
     2881 gagttgtaag tttggataat gaaaatcata tccttgatgt acatactgca agcaatggta
     2941 attatggaga tcttttaatg actcaaagat cgcaaaaatc aagcctatgt caaacacttt
     3001 ctatgcaaat gaaaggcaat gaagttttta aaatagcagt aaacacgctt agtaatgatg
     3061 ttgtagaaat tttagctaaa aataacattt tagcacaaga aattgatctt tttattcctc
     3121 atcaagctaa tctacgcatc attaaagccg tccaagaaaa actcaatcta agcgatgaaa
     3181 aatgtgtgat cactgtacaa aaatatggca atacttcagc tgcttctata cctatggcaa
     3241 tgaatgatgc ctatgaagaa ggtcgactta aaaaaggaaa tctgatctta ctagatgctt
     3301 ttggcggtgg ttttacttgg ggatctgcgc ttttaaaatt tggaggagag aatttttaat
     3361 tctctcttag ctttccaaaa gcttgaattt ctaccaaata accctctgct aaagcacttc
     3421 ctacacaagc tctaacaggt ttaggataat ttttaatcca agcatcataa atttcattca
     3481 ttgcatcaaa atcttgcata ttagctaacc agatttgaat ttgaatcaaa tctcctttgt
     3541 ttgcgcctat tttttcaaac aaagcatcaa gttctgcaag cgcttcttta gtttgttttt
     3601 taatatctcc gctaggttca aaagccactt gtcctgcagt cttaaaatat ttatcaaaaa
     3661 caataatttg cgacattcta tcgcactcat caaaacgctt tatcatgcat attttccttg
     3721 aaattctttc ataaattcac acaaggtttt tacctgatcc aaattaagcg cattataaat
     3781 acttgcacga attcctccta aaattctatg tcctttaagt cctatcattc cagcttcttc
     3841 ggcttccttt acaaaaagag gctctaaatc tttattttta gcaatattaa aactcacatt
     3901 cattaaagat ctatcctttt tatctgcatg tcctttataa aatccattac ttaaatcaat
     3961 acattcataa agcatagtag ctttttgaga atttttctca tgcactttat caagcccacc
     4021 ttgatttaaa agccaatcca tttcaagatt aaacatataa atggcaaagg ttggaggcgt
     4081 gttaaacaag gactgattct cagcatgagt caaataattt aacatactag gaatttgttt
     4141 atttttagat ctttctaaca tatctttacg gataaaaata caacttaaac ccgaaattcc
     4201 agcatttttt tgcactccgc cataaaaaag agcaatattt gaaaaatcta cttttctaga
     4261 aaaaaaatca ctcgatgcat ccacaatcaa aggagtttta gttttaggat aattttgata
     4321 ttgagtgccg taaatagtat tgttagaaca aatataagca taatcagcat tatcgctaaa
     4381 ttccactcta ggaatatgat cgaaattact ttcctcacta cttgctacgg ttttaacatt
     4441 gacacctaaa atttgtgctt ctttaatcgc tttttttgtc caaactcctg tatttgcata
     4501 ttcacaaacc ccatttaaag ctaaattcat aggaatcata gcaaattgca aacttgctcc
     4561 accttgtaaa aataatactt cataatcatc atttaactcg taaagttttt tagctttctc
     4621 ttgtgctcca aaatgcactt cttcaaatac ttttgtgcgg tgagaaattt ccattataga
     4681 ataaccccta ccctgataat cacagagttc tttttgagct tgctctaaaa tttctaaagg
     4741 taaagtcgat ggccctgcac tgaaattgat ttttctcata atctatcctt ataaaatttt
     4801 tgcttctttt tgagaagttt gagaacttaa aataacgata tcatcactct taagatcttc
     4861 taaatttgct attttaccat tttttctgat acaaataaac tttttgcttt tattaaaaaa
     4921 attctcatgt tgcaaataag cattttgcaa tttatctaat tttaattcat tataacgcat
     4981 ttgatttgcc aatagatgat ttaattgctt ttctatatta tggctttgtt ttattttttc
     5041 atctattatt tttggcaaag aattaaattt gaaaaatttg cttaaattta aaagcaaatt
     5101 ttcataattt tgtattttat aattccaaag ttgcattaat ttttcttcca ttaaatccaa
     5161 actttgctct atatccaact tagaataaaa caaagtatct atagcagctg aaggcgttgg
     5221 agctctaaaa tctgcaacaa aatcactaat aacataatca atctcatgtc ctatggctga
     5281 aataatagga gtttttgctt taaaaatctc tcttgctaaa ttttcatcat taaaacaaaa
     5341 aagatcttcc ctgcttcctc caccacgtgc tataataaga acatctaaat ccatatcatc
     5401 ggcttttttt aaagcttgta taagagaaaa aggagcatta tttccttgag ttaaagcatc
     5461 aaaaatataa atttttgcca aaaaatattc tttttgatga ataagtttta acatatcttg
     5521 caaagcagca gaagtttttg aagttataat acctactttt ttaggaaatt ttggcaaaga
     5581 ttttttaaag cgtggatcaa aaagtccttc tttttgcaaa cgctctttta aagccaaaaa
     5641 ctgtgcttcc aaatccccaa aacctgcttt tttcatacta gtagcgataa attgataacg
     5701 accgctttca ggatataaac tcacacttcc acaaagctct aaaaaatccc ccaccgctgg
     5761 tttaaacccg acttttaaat tagctccttt aaacatagca caagcaatgc ttgatctttc
     5821 atcttttaaa tcaaaatacc aatgccctga accatgcaaa gtaatttttg aaatttctcc
     5881 acttaaaact atatcatcaa aatgtgtttc taataaagcc tttgctttaa gatttaattc
     5941 tgttggtgtc atagtttttt tgctataaac attgaactca cgccaaagct aaaactttta
     6001 taatcaagca tttcaaaacc agcattttta agttctaaga tgaattcttt cttacttaaa
     6061 aatccttcaa tagagtttgg caaatactca taagcacttt tatttttact gattatccca
     6121 cctatacttg gtaaaatatt tttaagataa aaatctctac aagctgctat aaatccaccc
     6181 ttttctcttt ttgtaaattc caaaactacc aaaataccat ctttttgaag tactctagca
     6241 aattcgctta aggctttttg tctttctaca acattgcgaa tgccataact aatacttaaa
     6301 atatctaaac tttgactttc taaaggtaaa ttttgcgccc ctgcttttat aaattcgaca
     6361 tttggaaatt tttcttttgc aacatttagc atgccactac ttggatcaat acctttaata
     6421 tttaaaatat ttttttccat ttttaaagca ctctcttgcc aaatctctat catatcccct
     6481 gtgccacagg caatatcagc gatttttaaa tcttttttta aatacaaact catcactctt
     6541 tgacaagctt ttttgcgcca cgctacatca gctccaaagc ttaaaattct attcgcctta
     6601 tcataagtag gtgcaatttg attaaacatt tctataattt tttcttgttt ttgcattttt
     6661 atcctttgta aattttcaaa tttttacttg attttttaag caatttgcaa aatttatttt
     6721 tattattgat tattttggaa aaaatatttt tatccctatc tttggaatat ttttcataaa
     6781 gtttgtttaa attttttatc tctaaaaaat gataaaaata ttctaaaaat attgccaatt
     6841 caaaaaaact attttcaaaa agctctaaat caaaattttt tagtatattt tttctaaata
     6901 aaataatttt ttttctaagt tctaacgcaa caagttgttt aaaaaaccta tctttgcaat
     6961 cgccttcata aaaagaattt tcctttatga aaaaatcaaa at
//
LOCUS       DAPIVO010000075         6886 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.075, whole genome shotgun sequence.
ACCESSION   DAPIVO010000075 DAPIVO010000000
VERSION     DAPIVO010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6886)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6886)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6886
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.075"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..637
                     /locus_tag="RJ239_001597"
     CDS             <1..637
                     /locus_tag="RJ239_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331701.1"
                     /translation="SSSVCFAAVQAASKDGKIFYISEHSFKDNQVYDPQAEIFKKING
                     KNFYASKSKYPISNLTMIYNNPKSGNKNLSKLEILTPDTSKEEIITAFSTLGTVSSDT
                     QAVPSSFMPFIVTAYAQNTNATNNKLILENGELSSVYFCKPSIGDCGVPNNSQKGDRF
                     KYLITAAFTDRGEGFNNQTILKENSYINNGCRKYLHLALKWSSLYFRICSF"
     gene            567..2495
                     /locus_tag="RJ239_001598"
     CDS             567..2495
                     /locus_tag="RJ239_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331702.1"
                     /translation="MGVENIYTLPLNGVPYISGSVAFDGEAKDNKLILESNTKIDLHN
                     SQYFSDEEGKDIYDERITRLMGAFGINSNLQNNKVLIDSANIVLHGPDGEYTARSTFE
                     ILGALADVNNLKKYNVSKNSVIIKNLNLDLMVNSQNKITFYDAVLFGEIYGGRTLQGN
                     AEKNSIEVYHFNSLDHLNKNIKTHASLNLYGGYSNDGEANGNKIVFRLKKPLKISDNF
                     YGKNYYNLYGCFATEGANFNVFDIQNDLTYEKVPQNYSDKFTVYAARTLSGKANNNTL
                     SIKDSVISLPLYAFITSETTLDGIDYIADESNNNEVNFENIKSSKNLSLMINAKNVSN
                     NKINYNLIQSLTEASSLGKGSKIILKATQNANNNLIKLKDCSSAAVESSCIIKADKES
                     AFNKIINNNTAFSTASDKRQGYVGLIAGVSANSHDNIMELVNLNIDEYKNQDAIFLAP
                     SGTSDISNFKSYNNTLYLGGELNFFKDVNIDLLSGSVFHEVNKKGKIITQILPHQEDF
                     SKNNRLIIDTQDVKSEVVNNFENFTFILPNKIKNPILTIEKLINLPANGSMEILTKNK
                     PTKGKYILIQSDVGIYDGDNGLLNQQELENLLEKMKNNKNKFNYNKIEKLAKSTLKNV
                     NFSFEVSDDAKIIYINIL"
     gene            2507..3962
                     /locus_tag="RJ239_001599"
                     /pseudo
     CDS             2507..3962
                     /locus_tag="RJ239_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002874703.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
     gene            3959..4123
                     /locus_tag="RJ239_001600"
     CDS             3959..4123
                     /locus_tag="RJ239_001600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331703.1"
                     /translation="MSAGNYKTQAGKVIGDPGISVNNNFSNIYVYHNLENGYIDEGQN
                     FLSLCNIIMK"
     gene            4102..5028
                     /locus_tag="RJ239_001601"
     CDS             4102..5028
                     /locus_tag="RJ239_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331704.1"
                     /translation="MQYNNEVTGKKDFDSAVRKKFNDIKYLDNNSYAFADSFTKATDA
                     VKLSKDDFDPKLLQRILDDLMNGKYTYDFDTKTWTYTDSKGVVGKDEASEITQSLNFL
                     NAFKDTGVEQEFLKLWQGSQEQNYKNYTNLYEKWTQKKTAMDKIKTGEGYFASFKEEL
                     QKYQEALAQLDKENKNYEKIKESGLVSDETLRAIYEKLLEQKEALEKQFADLSGNEGF
                     RYKLENEILNSQGFSIEGKDVDGKVYTGNFNFKGKLASLPEKPNISIYEPDKQGGEDP
                     DKPSVLPPEIPEKVVEAPIKIQTEVDAKKRRR"
     gene            5141..6710
                     /locus_tag="RJ239_001602"
                     /pseudo
     CDS             5141..6710
                     /locus_tag="RJ239_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856720.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
BASE COUNT         2658 a          828 c         1218 g         2182 t
ORIGIN      
        1 atcttcttcg gtttgttttg cggcggttca ggctgcaagc aaggatggaa aaatttttta
       61 tatttctgaa cattctttta aggataatca agtttatgat cctcaagcag aaatttttaa
      121 aaaaattaat ggaaaaaatt tctatgcttc taagtcaaaa taccctatat caaatttaac
      181 tatgatttat aataacccta aatctggaaa taaaaattta tccaagcttg aaattttaac
      241 tccggatact tcaaaagaag agatcataac agcttttagc actttaggaa ccgtatcttc
      301 agatactcaa gccgttccta gttcttttat gccttttatt gtaacagctt atgcgcaaaa
      361 tacaaatgca acaaataata aacttatatt agaaaatgga gaattatctt ctgtgtattt
      421 ttgcaaacca agcatagggg attgtggagt acctaataat tctcaaaaag gcgatcgttt
      481 taagtattta attactgcgg cgtttactga caggggggag ggatttaaca atcaaaccat
      541 tttaaaagaa aactcctata tcaataatgg gtgtagaaaa tatctacacc ttgcccttaa
      601 atggagttcc ttatatttca ggatctgtag cttttgatgg tgaagctaaa gacaataaat
      661 taatcttaga gtcaaataca aaaattgacc ttcataattc ccagtatttt tcagatgaag
      721 aaggtaagga tatttatgat gaaagaatta ctcgtttaat gggagctttt ggcataaatt
      781 ctaatttaca aaacaataaa gttcttatcg attcagccaa tatcgtcctt catgggccag
      841 atggtgagta tacagctcgt tcgacctttg aaattttagg tgctttagct gatgtaaata
      901 atcttaaaaa atacaatgta agtaaaaatt ctgtaataat taaaaattta aatttagatt
      961 taatggtaaa ttcgcaaaat aaaataactt tttatgatgc tgttttattt ggagaaattt
     1021 acggtggaag aacattacag ggtaatgcag agaaaaattc tatagaagtt tatcatttta
     1081 actcattaga tcatcttaat aaaaacatta aaacacatgc atcgttaaac ctctatggtg
     1141 ggtattctaa tgatggtgaa gctaatggaa ataaaattgt atttcgtctt aaaaaacctt
     1201 taaaaatcag tgataatttt tatggaaaaa attattacaa tctttacgga tgttttgcta
     1261 cagagggtgc gaattttaat gtttttgata tacaaaatga tttaacctat gaaaaagttc
     1321 cacaaaatta ttctgataaa tttaccgtat atgcggcaag aactttaagt ggaaaagcaa
     1381 ataataatac cttaagtata aaagattctg ttatttcatt gcctttatat gcttttatta
     1441 caagtgaaac tacgctagat ggtatagact atatcgccga tgaatcaaac aataatgaag
     1501 taaattttga aaatattaaa tcatctaaaa atttaagttt gatgatcaat gctaaaaatg
     1561 tttcaaataa taaaataaat tataatctca ttcagagttt aaccgaagcg agttctttag
     1621 gaaagggctc aaaaattatt ttaaaagcaa ctcaaaatgc aaacaacaat cttataaagc
     1681 ttaaagattg ttcttcggct gccgtggaaa gttcgtgcat cataaaagca gataaagaaa
     1741 gtgcttttaa taaaatcatc aacaacaaca cagcttttag tactgcctca gataaaagac
     1801 aaggttatgt ggggttgata gctggagtgt ctgcaaattc tcatgataat atcatggagc
     1861 ttgttaattt aaatatagat gagtataaaa atcaagatgc tatattttta gctccatctg
     1921 gaacttcgga tatttcaaat tttaaatctt ataacaatac tttatattta ggtggagagt
     1981 tgaatttctt taaagatgta aatatcgatt tgctttctgg ttctgttttt catgaagtaa
     2041 ataaaaaagg taaaataatc actcaaattc taccgcatca agaagatttt tctaaaaaca
     2101 atcgtttgat tatagatact caagatgtca aatcagaagt ggtaaataac tttgaaaatt
     2161 ttacttttat tttaccaaat aaaataaaaa atcctatctt gactatagaa aaacttatca
     2221 atcttcctgc aaatggaagt atggaaattc ttactaaaaa taaaccaaca aaaggaaaat
     2281 atattctcat acaaagtgat gttggaattt atgatggtga caatggattg ttaaatcaac
     2341 aagaattaga aaatttgtta gaaaaaatga aaaataataa aaataaattt aattacaaca
     2401 agatagaaaa gttggctaaa agtacattga aaaatgtaaa ttttagcttt gaagtttcag
     2461 atgatgcaaa aataatttat atcaacatac tttaaaggag agtaacatga aaaagatgag
     2521 taaacatata gttttatcat ttgcggtgag ttctttgctc ttttctcaag cttatgcttt
     2581 actaagtggg ggtaaattta ctcatggtac aagtgggact atccatacct ctggcaatac
     2641 tgtaacgatt acaggaaaag gacaaaatca tgttatccaa tggggtggcg gttttaatat
     2701 aggacaaaat gaaagtgtaa attttaacgg caaaaatcaa aactacctaa acattgctta
     2761 tcaaaaagat gcttctaaga tagacggagc tttaaataga gggaataaca atatcttttt
     2821 agttaatcct atgggagttt tgattggcaa aacaggaact attactgcgg gaaaatttgt
     2881 agctagcaca acagctttaa gtgatgataa tgtcaaaact tttttagaga aaggagctag
     2941 tttctctccg gcatttgatg taagcaaaca aggaaatatt ataaatcttg gaaagatcaa
     3001 tgcagataat attgttttaa taggaaataa ggttgaaatc aataaaggaa aaattacttt
     3061 ggatgtatta aaacttgaag gtaataaagt ttatgttgat gctggagtgg taaaagatac
     3121 aaaaaatatc gtagccaaag cagagcaaga agctatcatt caacaaagca taacaagttt
     3181 tgaagaagat ggagctttat tgggtaattc tagtagtaaa tttagttttg atgatagtag
     3241 taaagttaaa aactggacta aatatggaag tattgcggat gcaacagaat ggaataaatt
     3301 tgctgatttt tggaatgtaa ataaagaaaa atttagaaca gcttttgatc attttcgttt
     3361 gattgatgat attgatttta gtggcgtgaa aacatacata gtaggtgata atacaagcaa
     3421 tgcttttgct aaatctttcg atggttctgg ttatgcttta aaaaatgtta atattaattc
     3481 atcaaatcaa tatgtaggaa tttttggagt tgttcaaaat agctatataa gaaactttaa
     3541 tattcaagga ttgaaaattg cttcaactgg ttatgatgct tagttggagg tatagtaggg
     3601 caaaatattg caaacagtta tacgggtttt gaaaatgtga ctgttaatga tctcgttatt
     3661 aatacagctg taaatactaa agttggcgga ataataggct ggggaaatgg tagtggaggg
     3721 aataacacta tcaattttac aaatgttgct attaataata taagtatagt agcaaagaag
     3781 gttcttatgt gggtggcata ggcagacaaa ttgatggtgg taattttaat aatgttgtgg
     3841 ttaatgacat agaaaaactt ataacttctg ggaatgatag taaaacagga ggatttactg
     3901 gaaaagttgg aaatttaaag attaataatg cttacttatt ttataaaatg gagcaatttt
     3961 gagtgctgga aactataaaa cacaagctgg aaaagttatt ggtgatcctg gaattagtgt
     4021 aaataataat tttagtaata tttatgttta tcataattta gaaaatggtt acattgatga
     4081 aggacagaat tttttaagtc tgtgcaatat aataatgaag taacaggaaa aaaagatttt
     4141 gatagtgctg taagaaagaa atttaacgat ataaaatatc ttgataataa ttcttatgct
     4201 tttgctgatt cttttaccaa ggcaacagat gctgtgaaat tatccaaaga cgactttgac
     4261 cctaaattgc ttcaaagaat tttagatgat ttgatgaatg gaaaatacac ttatgatttt
     4321 gataccaaaa cttggactta cacagatagt aagggtgtgg taggaaaaga tgaggctagt
     4381 gaaatcactc aaagtttaaa tttcttaaat gcgtttaaag atacgggagt agaacaagaa
     4441 tttttaaagt tatggcaagg ttcgcaagaa caaaattata aaaattatac caatctttat
     4501 gaaaaatgga cgcaaaagaa aactgctatg gataaaatca aaaccggcga aggttatttc
     4561 gctagtttta aagaagaatt acaaaaatac caagaagcct tagctcaact tgacaaagaa
     4621 aataaaaact atgaaaaaat caaagaatca ggcttagtta gcgatgaaac attaagggct
     4681 atatatgaaa aacttttaga acaaaaagaa gctcttgaaa agcagtttgc ggatcttagt
     4741 ggaaatgaag gatttcgcta taagcttgaa aatgaaattc taaattctca aggtttttct
     4801 atagaaggta aagatgtaga tggtaaagta tacactggaa attttaattt taaaggaaaa
     4861 ttagcctcat tgccagaaaa accaaatata tctatctatg agccagataa acaagggggt
     4921 gaagatccag acaaaccttc tgtattgccg cctgaaattc ctgaaaaggt tgtagaagct
     4981 cctataaaaa ttcaaaccga agtagacgca aaaaaaagaa gaagatgatg atcaagtgga
     5041 aataggagaa gcagatgcta gaagtagtgg tttgcgttgt attgtaagtg ataattttaa
     5101 gacaatgaat atttgtgtaa atgcaaaata ggaaataaaa atgagaaaaa ttttagttgt
     5161 tttagtctta ttgcaagtat tttcacatgc tgaagagcta aataataata aaataagaga
     5221 gcttatagaa agctctcctg aagcaaatga accacaaaat aaaaatttaa aaaatacatt
     5281 aaaaaatcaa aaaagccctg taaatttcaa agagcaaaat actacaaata ttacaaattc
     5341 acaaactgat caaaatgaag ctaaggtttt tgtaagagag tatgttttgc atatcgataa
     5401 taaagatttg acatttaaaa aattaagaat tagcgaaaaa taaattcaag atgcaatagc
     5461 tgaatatcgc aaccaagaat taagcttaca aaatttaaaa gatataacaa acattatagc
     5521 ttattattgt caattaagtg gccatccttc ggcaactgct tatataccac cgcaagattt
     5581 aagttctaac aaagtgcaaa ttaacatagc ttttggaact ttataggaaa agtaattatt
     5641 aaaaacaact caggtgtcag agattatgct ttagagagta aattgaacaa aaatcttaaa
     5701 gggaaagtta tcacaactaa aaatgtggaa aatgaaattt ataaaatcaa tgaaatatac
     5761 ggaatccaaa ccaatgctaa tttacaatca ggtgatggtt gtggagaaag cgatgttatt
     5821 atagaagtaa acaaaggtga gatagtgtaa ctttaacttt atattctaac aactatggga
     5881 ctaaagaaac aggtcgtttt agagcaggaa tgagtcaaag tttaaacaat atagcaagat
     5941 aaggggataa cttaaatttt tatcttcaag atagtgatga aaatcaaaca gattatggga
     6001 ttaattatag tacttttata gggaatttaa aaattactcc atttgcaact caaggacatt
     6061 atgttcctgg cagaatttat agaaatctta gtttttatag ggactctatg aatgttggag
     6121 taaatttttc ttatcctgtg tttttatata ctgagtattc tttatatctt gtttcgggtt
     6181 ttactcataa aaagattaaa gattattatc ttgatggttt agtaagcaat gaaaaagcga
     6241 gaaatagtgt aaatttgggc atagaaagaa cttatagagg tttggagaat aatgtcctaa
     6301 gttatacttt aaattttata tatggtaatg ttgaaaatga tggtgatttt tctggattta
     6361 atggagtaaa tttaggaaat tttggaaaaa tgaatttaaa tttaagcaac aaatatcaat
     6421 tctaagaacg cttaactcac atttttcaac tcaattatca aaaagttatc agcgatgctg
     6481 ttttagatag tagtgaatcc gtatctttag gtagaccttg tggtgtatgt gtttgtttag
     6541 aaggtgaggg aagtgcggat aatgttgttt ctggcgcctt gggaataaga tttcaaacac
     6601 ctttagaagg gctttactcg actccttttt atgatatagg gtattcttgg tatgaaaata
     6661 aagaatatca aagtgaaaat cattatctta tggatgcaat gggtatataa atactctata
     6721 caagaagtgc taatttttat gtaaaaatgg atgctgcaag agctgttcat cagtttaaac
     6781 acgatggaga acatcgagca agagtttatg caagcctaga aaaatacttt taactttggg
     6841 gtgattggaa aatccccccc ccgcccattt ttaaacccac caaata
//
LOCUS       DAPIVO010000076         6649 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.076, whole genome shotgun sequence.
ACCESSION   DAPIVO010000076 DAPIVO010000000
VERSION     DAPIVO010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6649)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6649)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6649
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.076"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(185..922)
                     /locus_tag="RJ239_001603"
     CDS             complement(185..922)
                     /locus_tag="RJ239_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7331705.1"
                     /translation="MIKAFSLLEFVFIILILGIVFNLGSLYLKKDNLLEGAIQILNDI
                     QYTQSLAMMQEGIRVDELTIAKREWFKSKWQIYFIKSAATGYDQTYTIFLDKNGDGNA
                     NLGKTEINIDREIAVDVINHNKLMNSGQSGVISKDDEKTTQRFNLTKRFGIEKVEFKG
                     SCSGFTRLVFDEMGRVYSPLKNANYAYEKTLAKNNSDCIIRLLSKKHALCIVIDTLSG
                     YVYIPDFKTLKSQFVNIKNKNYECSKI"
     gene            complement(915..2141)
                     /locus_tag="RJ239_001604"
     CDS             complement(915..2141)
                     /locus_tag="RJ239_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331706.1"
                     /translation="MEKIKNYKLIIILLSLDLLALLYGTSTLSISADEADIYFGEQGK
                     SLIFSHSLLYYISHFGTFIFGQNDFGLRLPFLFFHFLSCLLLYLLALKYTKTKIDAFF
                     SLLLFVLLPGTVASALLVNAASLVIFLTLAILCAYEYEKKWLFYILLIIVLFVDKSFN
                     ILFLTFFFFGIYKRNAILFTLSLVLFGASISFYGFDTGGRPRGYFLDTLGIFAACFSP
                     LVFVYFFYTIYRLTFQKYKNLLWFLMSVTFVFCLLLSLRQKLFLDDFLPFCVICTPLL
                     IKTLMQSYRVRLLVFRLRYKIFIECSIIFLIFCYFLIVANQLLYYFINNPNRHFANNY
                     HFAKELALELKKQDVLELATAPSLQKRLRFYGIKNSNKFYLKALKQADKHDMDKKIVK
                     VKLGKYEKVYQILNYD"
     gene            2269..2853
                     /locus_tag="RJ239_001605"
     CDS             2269..2853
                     /locus_tag="RJ239_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HDV7331707.1"
                     /translation="MQTIDQIFQTQIDIKKSTFLSFLCPFKDFKFLIETLKKEHPKAV
                     HFVYAYRVLNDFNQIVEDKSDDGEPKGTSGMPTLNVLRGYDLINAALITVRYFGGIKL
                     GTGGLVRAYSDAANAVINNSSLLSFELKKNTTIAIDLKNLNRFEHFLKTYSFNFTKDF
                     KDCKAILHIKLNEKEEQEFEIFCKNFAPFEIEKL"
     gene            complement(2897..3280)
                     /locus_tag="RJ239_001606"
     CDS             complement(2897..3280)
                     /locus_tag="RJ239_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331708.1"
                     /translation="MQVNYRTISSYEYDAISGQYKQVDKQIEDYSSSGDSDFMDMLNK
                     ADEKSSGDALNSSSSFQSNAQNSNSNLSNYAQMSNVYAYRFRQNEGELSMRAQSASVH
                     NDLTQQGANEQSKNNTLLNDLLNAI"
     gene            complement(3355..3690)
                     /locus_tag="RJ239_001607"
     CDS             complement(3355..3690)
                     /locus_tag="RJ239_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331709.1"
                     /translation="MMAKFRIQYSAGFGHYTQNHKGFGPTIYIEEVVEFDNGKDYFDY
                     IDFYKTYSKSDDTYFHISFLEDRPLSDKEITIRNEYRKMRDENCKKAKEEFIANNELD
                     VEHLPTHHD"
     gene            complement(3680..5257)
                     /locus_tag="RJ239_001608"
     CDS             complement(3680..5257)
                     /locus_tag="RJ239_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDV7331710.1"
                     /translation="MVEVKNLTMRFANQLLFENVNLKLVRGQRYGLIGANGAGKSTFL
                     KILSGEIESSSGEIVFDEGLKIAVLGQDQFAFENYTIKDAVMCANKRLYEALKEKEKL
                     YMSEEFTDEINERLGELEIITAEEDPNYDCETRCEKILSSLKIKDFDALMSTLQSADK
                     FKVLLAQVLFLGADALFLDEPTNNLDLEAISWLENELLRHEGTLVVISHDRHFLNKIC
                     TRILDVDFKQIRDFAGNYDDWYMASTLLAKQAELKRDKTLKEREELENFIRRFSANAS
                     KAKQATSRAKALEKLELEEIKISSRRDPSIVFRTNREIGNEVLEIKGIGKAYDKQLFS
                     NLELKIEKNDKIALIGANGVGKSTLAKIIAHAISPDSGSIHLGATIELGYFPQDTSNL
                     ICENLKLYEWLMSEKFKDLDEIRKCLGRMLFSGSDQEKMAASLSGGEKHRLMLSRLML
                     ERPNFLLLDEPDNHLDLESIIALGEALYNFKGVVLCISHDRELVSAFANRIWHLENGK
                     LTDFRGTYQEFLGENDG"
     gene            complement(5387..5803)
                     /locus_tag="RJ239_001609"
     CDS             complement(5387..5803)
                     /locus_tag="RJ239_001609"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331711.1"
                     /translation="MFKKVILFFLMGFALLQANSLDKCDNTAVVSNLKEKIPSEIFKN
                     LYELSGLKAQGIDYEDYAKGLKEIAKHDGMVNYTDMIEVNSISNFDLNFDSCMATINA
                     ALKGEQRKGLWSVVYKVSNINQVKITDITYINGDFQ"
     gene            complement(5816..6448)
                     /locus_tag="RJ239_001610"
     CDS             complement(5816..6448)
                     /locus_tag="RJ239_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HDV7331712.1"
                     /translation="MTKFLSICSLIAMLLSGCGSDFPGQPSDVARVQQNKYPNGNLKE
                     EIPYNKDSRIHGLKRAFYDNGQLRAEENYKNGKKDGISREYSRNGQLLEEVHFKDNRG
                     YGDFASYYENGNMRAKGKLLGYNEDGMPEFEGNYKEYYENGTLMCDYNFDNKGKFDGV
                     QKRYDENGALEDEENYKNGLKNGVFREYKKGEIVREEEYKNGILVAKPKN"
     gene            complement(6457..6627)
                     /locus_tag="RJ239_001611"
     CDS             complement(6457..6627)
                     /locus_tag="RJ239_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002899643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superinfection immunity protein"
                     /protein_id="HDV7331713.1"
                     /translation="MLPAIIGLSRKHSNWLIISLLNLFFGWTIIVWLVCLIWSFTGSF
                     KQTIIIKEKNEK"
BASE COUNT         2386 a         1174 c          772 g         2317 t
ORIGIN      
        1 aaaaaccaaa agagttaatt tataaaatct actaagctag tgaaacttta taatttaaaa
       61 gattttaagt ccttttttca aaaaaaggaa atgaaagtat aaccaattaa acttaaaagt
      121 gtattaaaca aaggattaaa tagtataaat atttgtgtaa gtatttatat aagtataatg
      181 ggggctatat tttagagcac tcgtaatttt tattttttat attaacaaat tgacttttaa
      241 gtgttttaaa atctggaata taaacataac cgctaagcgt atctataacg atacaaagag
      301 catgcttttt tgataacaaa cgtataatgc aatctgaatt attctttgct aaagtttttt
      361 cataggcata attggcattt tttaacggag aatacactct gcccatttca tcaaatacta
      421 atctagtaaa tcctgaacaa gatcctttga attcaacctt ttctattccg aatctttttg
      481 taagattaaa tctttgtgta gttttttcat catctttact aataactcca ctttgacctg
      541 aattcattaa tttgttatga ttgattacat caacagcaat ttctctatct atattgattt
      601 cagttttacc taaattagca tttccatcgc catttttatc caagaaaata gtatatgttt
      661 gatcataacc tgtggcagct gattttataa aataaatctg ccatttactt ttaaaccact
      721 ctctttttgc aatagtcaac tcatcaactc ttataccttc ttgcatcatg gctaaacttt
      781 gggtatattg gatatcatta agaatttgta tcgcaccttc tagtagattg tcttttttta
      841 agtaaagact gcctaaatta aaaactatac ctaaaatgag aattataaac acaaattcca
      901 acaaactgaa agctttaatc atagtttaaa atctgatata ctttttcata ttttccaagt
      961 tttactttaa caattttttt gtccatatca tgcttatcgg cttgttttaa agcttttaaa
     1021 taaaacttat tgctattttt tattccataa aatcgcaatc ttttttgcaa acttggggct
     1081 gttgcaagct ctaaaacatc ttgttttttt aattctagtg ccaattcttt agcaaaatga
     1141 taattattgg caaaatgacg atttggattg tttataaaat aatacaataa ttgattagcg
     1201 acgattaaaa agtaacaaaa tatcaaaaaa attatagaac attctataaa gattttatac
     1261 cttaatcgaa aaactagtaa tctcacccta taactttgca ttaaagtttt tataagcaaa
     1321 ggagtgcaaa taacacaaaa aggcaaaaaa tcatctaaaa aaagtttttg tcttaaagaa
     1381 agcaacaaac aaaatacaaa tgttacgctc attaaaaacc ataataaatt tttatatttt
     1441 tgaaaagtca aacgataaat agtataaaaa aaatacacaa aaaccaaagg agaaaaacat
     1501 gcagcaaaaa ttcctaaggt atctaaaaaa taacctcttg gacgaccacc tgtatcaaaa
     1561 ccataaaaac tgatactcgc tccaaacaaa acaagagata aggtaaataa aatagcattt
     1621 cttttataaa tcccaaaaaa gaaaaaagtt aaaaataaaa tattaaaaga tttatcaaca
     1681 aataatacta taatcaataa tatataaaaa agccattttt tttcatattc gtaagcacat
     1741 aatatagcaa gggttaaaaa aatcaccaaa gatgcggcat taaccagtaa agcacttgca
     1801 acagtacccg gcaataaaac aaataacaat aaagaaaaaa aagcatcaat tttagtttta
     1861 gtatatttta aagctagcaa atacaaaagc aaacaactta aaaaatgaaa aaataaaaaa
     1921 ggaagcctta aaccaaaatc attttgccca aaaataaaag ttccaaaatg agatatataa
     1981 taaagcaaac tatgagaaaa aataagtgat ttaccctgct caccaaaata aatatcagct
     2041 tcatcagcac taatactcag tgttgaagtt ccataaagca aagccaacaa atcaagacta
     2101 agtaaaatga tgataagttt ataatttttg attttttcca taatgaaaat tttacaaaat
     2161 taaacttaaa atatcaatgc aaatcataca aatatcaaat atcttaaaaa ttaacatcaa
     2221 attgatttta gtttttataa gtataatttt aaataaaaga aggcaaaaat gcaaactatt
     2281 gatcaaattt ttcaaacaca aatcgatatt aaaaaatcta ctttcttatc ttttctttgc
     2341 ccttttaaag attttaaatt tttaatagaa acactaaaaa aagaacatcc aaaagccgtt
     2401 cattttgtct atgcttatcg tgttttaaat gatttcaatc aaattgtaga agataaaagt
     2461 gatgatggag agcctaaagg aacttctgga atgccaactt taaatgttct aaggggctat
     2521 gatcttatca atgcggcttt aatcactgta agatattttg gcggtataaa acttggtaca
     2581 gggggacttg taagagctta tagcgatgca gcaaatgctg tgataaataa ttcttcttta
     2641 ctttcattcg aattgaaaaa aaatacaacc attgctattg atttaaaaaa tttaaatcgt
     2701 tttgaacatt ttttaaaaac ttattctttt aatttcacaa aagattttaa ggattgcaaa
     2761 gctatattac atatcaaatt aaatgaaaaa gaggagcaag aatttgaaat tttttgtaaa
     2821 aattttgcac cttttgaaat agagaaatta taaattcttg caagtaaata taaaagctcc
     2881 aaaatggagc ttttgattaa attgcgttca ataaatcatt taacaaagta ttattcttac
     2941 tttgttcatt tgcaccttgt tgtgtaagat cattatgaac gctagcactt tgagctctca
     3001 tagacagctc gccttcattt tgtctaaaac gataagcgta aacatttgac atttgagcat
     3061 aattacttaa atttgaattt gagttttgcg cattgctttg aaaactactg ctagaattta
     3121 aagcatctcc gcttgacttc tcatccgcct tatttaacat atccataaaa tcagaatctc
     3181 cagatgaaga ataatcttca atctgtttat ccacctgttt atactgacca ctaatagcat
     3241 cgtattcata cgagctaatc gttctataat ttacctgcat agttttctcc tttcaaaata
     3301 tgcaaaaact atacaagcaa aaagcgttcc tttttatgta aaaattaatg ttttttaatc
     3361 atggtgagta ggcaaatgct ccacatcaag ctcattgttg gctataaatt cctccttggc
     3421 ttttttacag ttttcatcac gcattttgcg gtattcattg cgaatggtga tttctttatc
     3481 gcttagaggt ctatcttcta aaaaactgat atgaaaataa gtatcatcgc tctttgaata
     3541 agttttataa aaatctatat agtcaaaata atccttgcca ttatcaaact ctacgacctc
     3601 ttctatataa atcgtaggtc caaaaccctt gtgattttgc gtatagtgcc caaaacctgc
     3661 gctgtattga attctaaatt tagccatcat tttctcctaa aaattcttga taagttccac
     3721 gaaaatccgt aagcttacca ttttctaaat gccaaattct attagcaaaa gcagaaacta
     3781 actccctatc gtggctgata caaagcacta cacctttgaa attatacaaa gcttcaccta
     3841 gtgcaataat actttcaaga tctaaatggt tatcaggctc atctaaaagc aagaaatttg
     3901 gacgctctag cattaaacga gaaagcatta aacggtgttt ttcaccccca cttaaacttg
     3961 ctgccatctt ttcttgatca ctgccactaa aaagcattct acctaaacac ttacggattt
     4021 catctagatc tttaaatttt tcactcatca accattcata aagtttcaaa ttttcacaaa
     4081 ttaaattact tgtatcttga ggaaaatatc caagctctat agttgcccca agatgtatgg
     4141 atccactatc tggacttata gcatgggcga tgatttttgc caaagtactt ttgcccacac
     4201 catttgcccc aatcaaagcg attttatcat ttttttctat ttttagctcc aaatttgaaa
     4261 acaattgttt atcataagcc ttgcctatac ctttaatttc taaaacttca ttacctattt
     4321 cacgattagt tctaaatact atactaggat ctctacggct tgaaatttta atctcttcaa
     4381 gctctagttt ttcaagcgcc ttagcacggc ttgtggcttg ttttgcttta gaagcatttg
     4441 cactaaaacg gcgaatgaaa ttttctaatt cttctctttc ttttaaggtt ttatcgcgtt
     4501 taagctcagc ttgttttgcc aaaagcgttg aagccatata ccaatcatca taatttcccg
     4561 caaaatcacg aatttgttta aaatccacat ccaaaatcct tgtgcaaatt ttatttaaaa
     4621 aatgcctatc atgagagatg acaaccaaag ttccttcatg tcttaaaagt tcattttcaa
     4681 gccaagaaat cgcctctaaa tcaaggttat ttgtaggctc atctaaaaaa agcgcatcgg
     4741 cacctaaaaa caaaacttga gctaacaaaa ctttaaattt atccgcactt tgtaaggtgc
     4801 tcattaaagc atcgaaatct ttaatcttta aagaacttaa aattttttca caacgtgttt
     4861 cacaatcata atttggatct tcttcagccg ttattatctc aagctcacct aaacgctcat
     4921 tgatctcatc agtaaattcc tcgctcatat aaagcttttc tttttctttt aaggcctcat
     4981 ataaacgctt atttgcacac atcactgcat ctttgatggt gtagttttca aaagcaaatt
     5041 gatcctgtcc taaaactgcg attttcaagc cttcatcaaa tactatttca ccactacttg
     5101 actcaatttc tcctgaaaga attttcaaaa aagtcgattt tcccgcacca ttagcaccga
     5161 taagtccgta tctttgtcct cgaacaagtt ttaaattaac attttcaaat aaaagctgat
     5221 ttgcaaaacg catagtaaga ttttttactt caaccatgat tttccttaaa ttttttactt
     5281 ataaaaattt ttaagaaatt gtatcaaaaa aagacttgaa attaattgag tataaaatat
     5341 tagtaagtca tgaaattaat tctattgact tactttaata aaaatattat tggaaatctc
     5401 cattgatata agttatatct gtaattttca cttgatttat gttagaaacc ttataaacaa
     5461 cactccaaag accttttctc tgttcccctt ttaatgcagc attaatcgta gccatacaag
     5521 aatcaaaatt aagatcaaaa tttgaaatgg aattaacttc gatcatatca gtgtaattta
     5581 ccattccatc atgcttggct atttccttga ggccttttgc ataatcttca taatcaatcc
     5641 cttgggcttt aagtccggat aattcataaa gatttttaaa aatttcacta ggaatttttt
     5701 ctttaagatt tgaaacaact gccgtattat cacatttgtc taatgagttg gcctgaagca
     5761 aggcaaaccc cattaagaaa aataaaatta cttttttaaa catatctaaa ctcctctaat
     5821 ttttaggttt tgctactaaa ataccatttt tatattcttc ttctcttaca atctcccctt
     5881 ttttatattc tctaaagact ccatttttaa gtccattttt ataattttct tcgtcttcta
     5941 aggcgccatt ttcatcataa cgcttttgta ctccatcaaa tttaccttta ttatcaaaat
     6001 tataatcaca cattaaagtt ccattttcat aatattcctt gtaattacct tcaaattctg
     6061 gcataccatc ttcattatag ccaagtagtt ttccctttgc tctcatattt ccattctcat
     6121 aatagcttgc aaaatcacca tatccgcgat tatctttaaa atgcacctcc tcaagtaatt
     6181 gcccatttct agaatattcc ctgctaattc catctttttt tccattttta taattttctt
     6241 cagctcttag ctgaccattg tcataaaaag ctctttttaa cccatgtatt cttgaatctt
     6301 tattataggg aatttcttct tttaaatttc catttggata tttgttttgc tgaactctag
     6361 ccacatcgct aggttgtcca ggaaaatcac ttccacaacc acttaacaac atcgcaatta
     6421 aactacaaat gcttaaaaat tttgtcattt tttctcctat ttctcatttt tttctttaat
     6481 aataatagtt tgcttaaaac ttcccgtaaa agaccatatt aaacaaacaa gccaaacaat
     6541 aatagtccaa ccaaaaaaca aatttagcaa agaaattatc agccaattag aatgctttct
     6601 gctcaaacca ataatagcgg gcaacatgta taatataaac aataatatt
//
LOCUS       DAPIVO010000077         6527 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.077, whole genome shotgun sequence.
ACCESSION   DAPIVO010000077 DAPIVO010000000
VERSION     DAPIVO010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6527)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6527)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6527
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.077"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            66..1061
                     /locus_tag="RJ239_001612"
     CDS             66..1061
                     /locus_tag="RJ239_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide synthesis protein"
                     /protein_id="HDV7331714.1"
                     /translation="MQIQQNNSLIYNTLTKKLSSFIPIKSTRRKLRNHIQYKLEHPKV
                     TNYLSNNYINPFLEGKIPHFDFEKKHYFKNDKIIWQFWYQGKNQASPMIQQCFNSVQS
                     QMKDDYTIIILDKDNIKDYLDFPPFVIEKLENNFFGEKTITFFSDLLRVCLLATYGGI
                     WCDASIFLSSKIPSELCDKDFFTFERSKIKPSKEKLKKFIKSGYFSYGYFNWNDDFKV
                     KMLSSFMIAKTNNTFIQTLKDILMNYWKNEQSSENHYYFILHIIFELLKEHGFVNDIY
                     KNMSDIECHLLQFSAKEKFNSTLWEEIQKQSFLHKLTHFKSIKKDSMIDKIILQS"
     gene            complement(1045..2217)
                     /locus_tag="RJ239_001613"
     CDS             complement(1045..2217)
                     /locus_tag="RJ239_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDV7331715.1"
                     /translation="MKKVGVVIPIYNVEKYLKECLDSVINQTYTNLEIILVNDGSTDE
                     NSLNIAKEYTLKDKRIILFDKKNGGLSSARNVGIEYFSGEYETQYIEKENELNVFKII
                     GDNPQNIYKIYKYKNALASDKLEISKIDYIIFLDSDNYWELNCIEECVVRMQNVDVLW
                     FDHACIYDDGIEDKGQKTRMNVFNFTQECTITPRDYAKQAIKVGSRDISFSWGGMIDF
                     SFLKQLKLKFINKIINEDIHFGMVLFASADSIYILPKRLYLCRLRANSISNHDKKVTK
                     ANVSEYFKDLYEFFGENAKEAKNYLKAASRMITALELIEFFKDQKNENSQAIKEAFLP
                     FYVKKALMIKKFKKDPLNLKEKLPIIKPFIQTKIPYDLWKIWQKIKGILDKINFAK"
     gene            complement(2221..3768)
                     /locus_tag="RJ239_001614"
     CDS             complement(2221..3768)
                     /locus_tag="RJ239_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDV7331716.1"
                     /translation="MNLKQISAIIIVKNAKQTLLECLNSLKDFDEIILLNNESSDNTL
                     NIANEFKKDFANLHIYHSAFIGFGALKNLALSYAKNDWILSIDADEVLENECIKELKN
                     LELQEDNIIALSRKNLYKGEWIKACGWWPDYVWRIFNKNFTRFNDNLVHESLVLPSNA
                     KKIYLKNGLRHYAFRDISHLIDKMQYYSSLWAKQNIHKKSGVLKANLRAFWTFFRNYF
                     LKNGFLYGYKGFIISVCNALGTFFKYMKLYELQKQKPKTCALIITTYNQKERLKLVLD
                     SVKNLAFLPNEVLIADDGSKEDTARLIEEYQKDFPCPLKHIWQEDEGFRAAKSRNNAI
                     KASKSEYIILIDGDMILEKDFVKNHLEFAKRKVILQGSRVILNKNESEEILKNNNYSL
                     AFNKKGFKNQRSIFLAKCVYKFSKLTKKFFKKSQLVKGSKTCNMSFYKSDFEAIEGFN
                     EKFIGWGREDSEFVARFLFNDGVFKRLKFNALAYHIYHEENSKNMLEINHQIYLETIK
                     NEKTTWR"
     gene            complement(3765..4652)
                     /gene="htrB"
                     /locus_tag="RJ239_001615"
     CDS             complement(3765..4652)
                     /gene="htrB"
                     /locus_tag="RJ239_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase
                     HtrB"
                     /protein_id="HDV7331717.1"
                     /translation="MKNSDRIYLSLYYILKFFVTFMPECILHFLALIVARIAFYLNKK
                     HRKIINTNLQICFPQYTQKERDKLSLKIYENFAQFGIDCLQNQNTTKEKILNKVNFIN
                     ENFLIDALALNRPIIFTTAHYGNWEILSLAYAAKYGAISIVGKKLKSEIMYEILSQSR
                     TQFDIELIDKKGGIRQMLSALKKGRTLGILTDQDCVENESVRLKFFNKEVNYQMGASL
                     IAQRSNALIIPVYAYKEDGKFCIEFFKVKDSQNASLEELTLYQAQSCEEMIKKRPWEY
                     FFFHRRFASYNKEIYKDAK"
     gene            complement(4642..5670)
                     /gene="waaC"
                     /locus_tag="RJ239_001616"
     CDS             complement(4642..5670)
                     /gene="waaC"
                     /locus_tag="RJ239_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HDV7331718.1"
                     /translation="MKIAIVRLSALGDIIQSAVVLQFIKNFKKDIEIHWFVDEKFEGI
                     LKNHPLINKLYALPLKDKKILKSLKILLKARKNNYNAVIDLQGLIKSAIVSRILSRNN
                     FGFDKNSLKESFAHNFYNQKLELDYNENVFVRYLSLTSFMLNTDFNVKNLAFKQDIFS
                     VDENLKQLLNNKLKLDKNEKNILIHVGSSVENKIYPKTKLAILCKLLINEFQQTKIWL
                     AWGNVKEYEFAKEVLNLSGIDETHIELAPKFNLEELMAFTKMMNLIIGNDSGPTHLAF
                     ALNKASITIFGATPSYRNAFQTHINKIIDAGKKIQNAKHIDKSDFCITRIEEEDIFKL
                     AKGLLNEK"
     gene            5736..>6527
                     /locus_tag="RJ239_001617"
     CDS             5736..>6527
                     /locus_tag="RJ239_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HDV7331719.1"
                     /translation="MAKNEGYICVFDCESVPDVELIRKTLGFEGSDLEVSLKALQWQK
                     EQSGSEFLPLPYHKIISICAVLSDNFGKFIKVNKIDGQNEKEMIENFFNFIENYEPKL
                     VSFNGKNFDMPVLVLRALKYNLKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGSNG
                     RGIKLDTLCSMVGLPGKYDVHGDEVMKLFYENKLEKIHEYCESDVLNTYMLFLKYELI
                     KANVDEEDYVGFLSYMRDFLCAKKSDRSYTEVFAKACESEISKVRS"
BASE COUNT         2239 a          943 c          841 g         2504 t
ORIGIN      
        1 gttttcatat atacataacc ttaattattt ttgatattat atcaaaaaac tttttaggaa
       61 tatatatgca aatacaacaa aacaattctt taatttataa tactttaaca aaaaaactaa
      121 gctcatttat acccataaaa tcaacaagaa gaaaattaag aaatcatatt caatataagc
      181 tagaacaccc taaagtgact aattatcttt caaacaacta tattaatcct tttttagaag
      241 ggaaaattcc tcattttgat tttgaaaaaa aacattattt taaaaacgat aaaattattt
      301 ggcaattttg gtatcaaggt aaaaatcaag cttcacctat gatacaacaa tgttttaact
      361 ctgtacaaag tcaaatgaaa gatgactaca caattatcat tttagataaa gataatataa
      421 aagattacct tgattttcca ccatttgtta tagaaaaatt agaaaataat ttttttggag
      481 aaaaaactat aacttttttt tcagatcttt taagagtatg cttgcttgca acttatggag
      541 gtatatggtg tgatgcaagt atatttttaa gttctaaaat tcctagtgaa ctttgtgata
      601 aagacttttt tacctttgaa agatcaaaaa taaaacctag taaagaaaaa ttgaaaaaat
      661 ttatcaaaag tggatatttt tcttatggat actttaactg gaatgatgat tttaaagtta
      721 aaatgctaag tagttttatg atagccaaaa caaacaatac ttttattcaa actctaaaag
      781 atattttaat gaattattgg aaaaatgagc aatcaagtga aaatcactat tattttatac
      841 tacatatcat atttgaactt ttaaaagagc atggctttgt aaatgatatc tataaaaaca
      901 tgagcgatat agaatgccat ttattacaat ttagtgccaa agaaaaattt aattcaactc
      961 tttgggaaga aattcaaaaa caaagctttt tacacaaact cacgcatttt aaatctataa
     1021 aaaaagattc aatgatagat aaaatcattt tgcaaagttg attttatcta aaataccctt
     1081 tattttttgc caaattttcc aaagatcata aggaattttt gtttggataa aaggtttaat
     1141 tataggtaat ttttccttta aattcaaagg atctttttta aattttttaa tcatcaaagc
     1201 cttttttaca taaaaaggca aaaaagcctc ttttatggct tgagaatttt catttttttg
     1261 atctttaaaa aattctatca actccaaagc tgttatcatc ctacttgctg cttttaaata
     1321 gttttttgcc tctttagcat tttctccaaa aaattcatac aagtctttaa aatactctga
     1381 cacatttgcc tttgtaactt ttttatcatg atttgatata ctatttgccc tcaaacggca
     1441 taagtacaat ctttttggta aaatatagat actatcagca ctcgcaaaca aaaccatgcc
     1501 aaaatgaata tcttcattga tgattttgtt gataaattta agttttaatt gttttaaaaa
     1561 tgaaaaatct atcataccac cccagctaaa cgagatatcc ctcgaaccta cttttatagc
     1621 ttgcttagca tagtctcttg gagtgatagt gcattcttga gtaaaattaa atacattcat
     1681 ccttgttttt tgacccttat cttctatacc atcatcataa atacaagcat ggtcaaacca
     1741 taatacatct acattttgca ttcttacaac acactcttct atgcagttta actcccaata
     1801 attatcagaa tctaaaaaga taatataatc aatctttgaa atttctagct tatcactcgc
     1861 taaagcattt ttgtacttat aaattttata aatattttgt ggattatcgc caataatctt
     1921 aaaaacattt aattcatttt ctttttcaat atattgtgtt tcatattctc cactaaaata
     1981 ttctatacct acatttctag cactacttaa accaccattt tttttatcaa aaagaattat
     2041 tcttttatct tttaaagtat attcttttgc aatattaagt gagttttcat ctgtactacc
     2101 atcatttact agtatgattt ctaaattagt ataagtttga ttgattacac tatctaaaca
     2161 ttcttttaga tatttttcta cattgtatat ggggattact acacctactt ttttcatgtt
     2221 ttatctccaa gttgtttttt cattttttat agtttcaaga taaatttgat gattgatttc
     2281 gagcatattt ttgctatttt cttcatgata gatatgataa gccagagcat taaatttaag
     2341 ccttttaaac actccatcat taaataaaaa tctagctaca aactcactat cttccctacc
     2401 ccagcctata aatttttcat taaatccctc aatggcttca aaatcacttt tataaaaact
     2461 catattgcaa gttttactac ctttaacaag ttgtgatttt ttaaaaaatt tcttagttag
     2521 ttttgaaaat ttatatacac atttagctaa aaaaatactt ctttgatttt taaaaccttt
     2581 tttattaaaa gctaaactat aattattgtt ttttaagatt tcttcgcttt catttttatt
     2641 taaaattact cttgaacctt gtaaaattac tttgcgtttt gcaaattcta aatgattttt
     2701 tacaaagtct ttttctaaaa tcatatcacc atcaattaaa attatatatt cacttttaga
     2761 agctttaata gcattatttc tactttttgc agcacgaaaa ccctcatctt cttgccaaat
     2821 gtgttttaaa gggcaaggaa aatctttttg atattcttca ataagccttg ctgtatcttc
     2881 tttgctacca tcatctgcga ttaaaacttc attgggtaaa aaggctagat ttttaacact
     2941 atcaagcact aatttaaggc gttctttttg attataagtt gttattatta aagcgcaagt
     3001 ttttggcttt tgcttttgaa gttcatataa tttcatgtat ttaaaaaaag tccctaaggc
     3061 attgcaaacg ctaattataa aacccttata accatataaa aagccatttt ttaaaaaata
     3121 atttctaaaa aaagtccaaa aagctcttaa atttgctttt aaaacaccac tttttttgtg
     3181 tatattttgt tttgcccaaa ggcttgagta gtactgcatt ttgtcaatta ggtgggaaat
     3241 atctctaaaa gcataatgcc ttaatccatt tttaagataa atttttttag cattacttgg
     3301 caaaacaagg ctttcatgta ctaaattatc attaaaacga gtgaaatttt tattaaaaat
     3361 tctccaaaca taatcaggcc accaaccaca tgcctttatc cattcgcctt tatagagatt
     3421 tttacgacta agtgcgatga tattatcttc ttgaagttct aaatttttaa gctctttaat
     3481 acactcattt tcaagcactt catcagcatc aatgcttaaa atccaatcat tttttgcata
     3541 acttaaagca aggtttttta aagctccaaa acctataaaa gcactgtggt aaatgtgcaa
     3601 attagcaaaa tcttttttaa attcattagc tatatttagg gtattatcac tactttcatt
     3661 gttaagtaaa ataatttcat caaaatcttt taaagaattt aaacattcaa gcaaggtttg
     3721 ttttgcattt tttacgatga taatagcact tatttgcttt agattcattt tgcatccttg
     3781 taaatttcct tattataact tgcaaagcgt ctatgaaaaa aaaagtattc ccaaggtctt
     3841 tttttaatca tttcttcgca actttgtgct tgataaagtg tcagttcttc taagcttgca
     3901 ttttgagaat cttttacttt aaaaaactct atgcaaaatt taccatcttc tttataggca
     3961 taaacaggga tgatcaaagc attacttctt tgtgcgataa ggcttgctcc catttgataa
     4021 ttcacttctt tgttaaaaaa ttttaatctt acgctttcgt tttctacaca gtcttgatca
     4081 gttaaaattc ccaaagttct cccttttttt agagcgctta gcatttgtct tatgccgcct
     4141 tttttgtcga taagttctat gtcaaattgg gtgcgacttt ggcttaaaat ttcatacata
     4201 atttcacttt ttaacttttt ccctactata gaaatcgcac catatttagc tgcataagca
     4261 aggcttaaaa tttcccagtt tccatagtgt gcagttgtga agataatagg acgatttaaa
     4321 gctagagcat ctataagaaa attttcattg atgaaattta ctttattgag aattttttct
     4381 ttggtggtgt tttgattttg caaacaatca atcccaaatt gagcaaaatt ttcataaatt
     4441 tttaaagaca atttatcgcg ttctttttga gtgtattgag gaaaacagat ttgcaaattt
     4501 gtattgatga ttttgcggtg ttttttgtta agataaaaag cgattcttgc tacaatcaaa
     4561 gctaaaaaat gcaagataca ctcaggcata aaagtaacaa aaaatttcaa aatataataa
     4621 agactaagat atattctatc actatttttc attaagtaag cctttggcaa gtttgaagat
     4681 atcttcttct tctatacgcg tgatacaaaa atcactttta tcgatatgct tggcattttg
     4741 gattttttta cctgcatcaa tgattttatt gatatgagtt tgaaaagcat tgcggtagct
     4801 tggtgttgca ccaaaaatcg taatagatgc cttatttaaa gcaaaagcca aatgtgttgg
     4861 gccgctatca tttcctatga ttaaattcat catttttgta aaagccatta gttcttcaag
     4921 attgaatttt ggcgctaatt ctatatgtgt ttcatcaata ccactaagat ttaaaacctc
     4981 tttagcaaat tcgtattctt ttacatttcc ccaagcgagc caaatttttg tttgttgaaa
     5041 ttcattgatt aaaagcttac aaagtatagc aagtttggtt ttaggataga ttttattttc
     5101 tacacttgag cccacatgta tgagtatgtt tttttcgttt ttgtcgagtt tgagtttatt
     5161 atttaagagt tgttttaaat tttcatctac gctaaaaata tcttgtttaa aggctaaatt
     5221 tttgacatta aaatcagtat ttaacataaa ggaggtaaga cttaagtatc ttacaaatac
     5281 attttcattg taatctaact caagtttttg gttgtagaaa ttatgagcaa aactttcttt
     5341 aagactattt ttatcaaaac caaaattatt tctacttaaa attcgactta caatagcaga
     5401 ttttatgagc ccttgtagat ctattactgc attatagttg ttttttcttg ctttaagaag
     5461 aatttttagg ctttttaaaa tttttttgtc ttttaagggc agggcataga gtttgtttat
     5521 taaaggatgg tttttaagta tgccttcaaa tttttcatct acaaaccaat gaatttctat
     5581 atctttttta aaatttttga taaattgcaa aaccacggca ctttgtataa tatcaccaag
     5641 tgctgacaaa cgaacaattg ctattttcat taaaagccta atattttaaa atttttgcta
     5701 tgattttagc gaaattattt aaaaaaaggt taaaaatggc aaaaaatgaa ggttatattt
     5761 gtgtttttga ttgtgagagt gtgccagatg ttgagcttat ccgcaaaact ttgggttttg
     5821 aaggaagtga tttagaggta agtttaaaag cacttcagtg gcaaaaagaa caaagtggga
     5881 gtgagttttt gcctttgcct tatcataaaa ttatcagtat ttgtgcggtt ttaagtgata
     5941 attttggaaa atttatcaaa gtgaataaaa ttgatggaca aaatgaaaaa gaaatgattg
     6001 agaatttttt caattttata gaaaattatg agccaaaatt agtcagtttt aatggtaaaa
     6061 atttcgatat gcctgttctt gttttaaggg ctttaaaata caatttaaaa gcagcaactt
     6121 atttggatac tcaaagtgat aaatggaata attataaaac aagattttca gaattaaaac
     6181 attgtgattt attagaatcc ttaggatcta acgggcgtgg aataaagctt gatacacttt
     6241 gttctatggt gggtttgcca ggaaaatatg atgtgcatgg cgatgaggta atgaaacttt
     6301 tttatgaaaa taaacttgaa aaaatccacg aatattgtga aagtgatgtt ttaaacacct
     6361 atatgctttt tttaaaatat gaacttatta aagctaatgt tgatgaagaa gattatgttg
     6421 gttttctttc ttatatgaga gatttcttgt gtgcaaaaaa atcagatcgt tcttatacag
     6481 aagtttttgc aaaagcttgt gagagtgaaa tttcaaaagt tcgatct
//
LOCUS       DAPIVO010000078         6391 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.078, whole genome shotgun sequence.
ACCESSION   DAPIVO010000078 DAPIVO010000000
VERSION     DAPIVO010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6391)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6391)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6391
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.078"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            52..714
                     /gene="sodB"
                     /locus_tag="RJ239_001618"
     CDS             52..714
                     /gene="sodB"
                     /locus_tag="RJ239_001618"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Fe]"
                     /protein_id="HDV7331720.1"
                     /translation="MFELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIKD
                     TEFAGKDLVSIIKTSNGGVFNNAAQVYNHDFYFDCIKPSTGCGCGGSCQSIDANLQAA
                     LEKEFGSLENFKAEFIKGATGVFGSGWFWLVYNTKNQKLEFVGTSNAATPITEDKVPL
                     LVVDVWEHAYYVDHRNTRPAYLEKFYAHINWEFVAKAYEWALKEGMGSVSFYANELHP
                     VK"
     gene            783..1472
                     /locus_tag="RJ239_001619"
                     /pseudo
     CDS             783..1472
                     /locus_tag="RJ239_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002881173.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
     gene            complement(1485..2690)
                     /locus_tag="RJ239_001620"
     CDS             complement(1485..2690)
                     /locus_tag="RJ239_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase family protein"
                     /protein_id="HDV7331721.1"
                     /translation="MKNLLIIGAGGVSRVATVKCAMNSDTFSKITLASRTKSKCDEIA
                     AFIKERLGVQIETAQIDADDSNAVVELIKKTEAQILLNVALPYQDLSLMDACIKAGID
                     YIDTANYEHPDLAKFEYKEQWARNDEFKQAGILGLLGSGFDPGVTNVFCAYAQQNLFD
                     EISYIDILDCNAGDHGYAFATNFNPEINLREVSAKGRYWENGKWIETQPMEIKMEWDY
                     PEVGVKDSYLLYHEELESLVKNIKGLKRIRFFMTFGQSYLTHMKCLENVGMLGIKPVI
                     HQGKEIIPIEFLKTLLPDPASLGPRTKGYTNIGCVIRGKKDGKDKQVYIYNVCNHEEC
                     YKETGAQAVSYTTGVPAMIGTKLIAKGIWQGKGVFNMEEFDAKPFMEELNSQGLPWKI
                     IEMTPSLGE"
     gene            complement(2732..3640)
                     /locus_tag="RJ239_001621"
     CDS             complement(2732..3640)
                     /locus_tag="RJ239_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7331722.1"
                     /translation="MMLEIKNLSKNFGKIQALENINLHVKEGEFLSILGGSGSGKSTL
                     LRIIAKLEQASSYDLFSCKGEVALMFQNYALFPHLNVEKNILFALYDKKDKNQILNHL
                     LKTFEIEDLRYKKIDEISGGQAQRVAFARAMARGCKLLLLDEPFSNLDQNLKQDLRRE
                     LKKMIENQGITAIMVTHDIEDAYCMSDQIAFLEKGKILAHANPKELYFKPDFKSAQIL
                     PDLNIIEEKLDLEDEFFAWIASKNYIFGYAELKIGNRFEAKILQKEFLGAFCRLKLLY
                     KNIIFFILVSSSYDLEEKISFDIINF"
     gene            complement(3624..5240)
                     /locus_tag="RJ239_001622"
     CDS             complement(3624..5240)
                     /locus_tag="RJ239_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDV7331723.1"
                     /translation="MYKTLKYYKLGAILLALFLVLPIFGIFAELFYILFQNFNTSDLT
                     QFSSIKENLSHFFDYLFLKFIKDTFIISMGVLCLSLILGVSSAYLIANYDFYFCKILE
                     KLLILPLAIPAYILAFVYVGIMDFQGFFHENFGFRIDFFNHYGVIFVLAISLYPYIYL
                     FAKTAFKSEAKEAYEVAKIMKYSEFRIFTRVALLSARPAIFSGALLVLMETLSDYGAS
                     AYLGVDTFSAGIFKLWYDLNDSYSSSVLSGILMLFVFLIMYVDYYYKNKHHYSFNQNL
                     ALFIKKRKLNPIKQILSCIYCFMIAFVGFILPFIWLVYWGLKDHKLFESQFYIISFQT
                     IILALITALITTFLAYFLMFSSRIVKNHFFNLFILKISSLGYSIPAAALGISIIVLFV
                     FLDKFFHMSLLGNSLLVLVFAYIIRFLASAIYSLEGGYNKIHLNIDEASLNLRTSYFI
                     LFFKIHTPLMKHFLFLAFIIVFIDTIKELPLSRILAPFGFETLSVKAFWFASDERIYD
                     AALPSLFIVFLSLMVVVWMDKITRKDDVRN"
     gene            complement(5240..6244)
                     /locus_tag="RJ239_001623"
     CDS             complement(5240..6244)
                     /locus_tag="RJ239_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV7331724.1"
                     /translation="MKKIFFMFLTAVSFLGASELNIYSARHYNADFEIIKKFEEKTGI
                     KVNHTQAKASELIKRLSLEGSNSPADIFITADISNLTEAKNLGLLSPVSSKYLEEFIP
                     AHLRDKDKEWFAITKRARIIAYNKNTNIDISKMKNYEDLAKAEFKGEIVMRSATAPYS
                     KTLLASIIANDGNKEAKAWAKGVLENLATNPKGGDRDQARQVFAGEAKFAVMNTYYIG
                     LLKNSKNPKDVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQDAAKKFMEFMLSP
                     EIQKILTDSNYEFPIRNDVELSQTVKDFGTFKEDQIPVSKIAENIKEAVKIYDEVGFR
                     "
     gene            complement(6241..6372)
                     /locus_tag="RJ239_001624"
     CDS             complement(6241..6372)
                     /locus_tag="RJ239_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7331725.1"
                     /translation="MSMKKIILFLLCVGFAFACSEHSHTDFKDLNKTEYNSQLKDKI"
BASE COUNT         2322 a         1060 c          846 g         2163 t
ORIGIN      
        1 atattattat ggtaatattt tcaatatcaa actaaaaata aaggagaaat tatgtttgaa
       61 ttaagaaaat taccttatga taccaatgct tttggtgatt ttttgagtgc tgaaactttt
      121 agctatcatc atggaaaaca tcacaatact tatgttacaa atctaaataa tcttattaaa
      181 gatactgaat ttgcaggtaa agatcttgta agtattatca aaacttcaaa tgggggcgta
      241 tttaataacg cagctcaagt ttataatcat gatttttatt ttgattgcat taagccaagt
      301 acaggctgtg gctgtggcgg ttcatgtcaa agtatagatg ctaatttaca agcggcacta
      361 gaaaaagaat ttggatcttt agaaaatttc aaagctgaat ttatcaaagg cgctacagga
      421 gtttttggtt caggatggtt ttggttagtt tataatacta aaaatcaaaa actagaattt
      481 gtaggtactt caaacgcagc tacaccaatt actgaagata aagttccttt acttgttgta
      541 gatgtttggg aacatgctta ttatgtagat catcgcaata cacgccctgc ttatttagaa
      601 aaattctatg ctcatattaa ctgggaattt gttgcaaaag cttacgaatg ggctttaaaa
      661 gaaggcatgg gatcagttag cttttatgca aatgaacttc accctgtaaa ataactttaa
      721 tcctttttgt gctagaatgg attttgacat taagtcaaca ttctacacaa aaaggggcaa
      781 aaatggataa ttctttatct gcatatactc aaaaatatga caaagaaggt tatggacttc
      841 aatatcctga tggtcatgtt ataagatttt acgagagaat cttaaaatac aaactaagca
      901 aaacaagtgg aaaattactt gattttggtt gtggaaatgg agtgcattct aagtatttta
      961 aaaatataac cggggggggg tatagagcct tatggcattg atatagttcc tagtttaaaa
     1021 aaagtttggg aaaaagatcc ttgcttagat tctaaaaatt ttcacatcat atctcctaat
     1081 tctagcttta aaaaactctt caatacaaaa atggatttta tatttgcaaa tcaaagctta
     1141 tattatctta caaaacaagc ttttaaagaa gctgtgcaag aattttatga actatgcaat
     1201 gaaggagcta ttatatttgc aaccatgatg agcgataaag gctatagtat gtatgaaaga
     1261 ggagaactta tggataatag cttgcgtgaa gtaaaaggat gtccaagtgg tagattgagt
     1321 ggttcttcat atatacgctt tactaaagac atagaagaat taaaagaaga ttttaaacct
     1381 tttaaacctt tatttgggga gattatgaat taattaatct gtataatttt gaaggcagtg
     1441 tggagcactt tatttatata ggacaaaagt aagtgctcta gcacttactc tcctaagctt
     1501 ggagtcattt cgataatctt ccaaggaagt ccttgagaat tcagctcttc cataaaaggc
     1561 ttagcgtcaa attcttccat attaaacacg ccttttcctt gccaaattcc tttagcgatt
     1621 aatttcgtac ctatcatagc aggaacacct gtagtatagc tcacagcttg cgcgccagtt
     1681 tctttgtaac attcttcatg attgcaaaca ttataaatat aaacttgttt gtcttttcca
     1741 tcttttttac cacgaatcac gcaacctata ttggtataac ctttagtgcg tggtcctaaa
     1801 cttgcaggat caggaagcaa ggtttttaaa aattctatag gaatgatttc tttaccttgg
     1861 tgtatcacag gtttaatccc tagcattcca acattttcaa gacatttcat gtgagttaaa
     1921 taactttgtc caaaagtcat aaaaaagcgt attcttttta aacctttgat attttttacc
     1981 aagctttcaa gttcttcatg ataaagcaaa tagctatctt tcactcctac ttctggataa
     2041 tcccactcca tttttatttc cataggctgc gtttctatcc acttgccatt ttcccaataa
     2101 cgccctttag cagaaacctc acgcagattg atttcagggt taaaattcgt cgcaaaagca
     2161 tagccatgat cacctgcatt gcaatctaaa atatctatat aagaaatttc atcaaataaa
     2221 ttttgctgtg cataagcaca aaaaacatta gttacaccag gatcaaatcc acttcctaaa
     2281 agtcctaaaa ttcctgcttg tttaaactca tcatttctcg cccattgctc tttgtattca
     2341 aatttagcta aatcaggatg ttcataattt gccgtatcta tataatcaat ccctgctttt
     2401 atacaagcat ccattaaact caaatcttga taaggcaaag ccacattgag taaaatttgt
     2461 gcttctgttt tcttgataag ttctacaact gcattgctat catcagcatc aatttgcgcc
     2521 gtttcaattt gaacccctaa acgctctttg ataaaagcag cgatttcatc acatttgctt
     2581 tttgttctac tagctaaagt gattttacta aaagtatcag aattcattgc gcattttaca
     2641 gtagccacac gacttacccc acctgcgcct atgattaaaa gatttttcat tcctatcctt
     2701 caaaaatttt tttgatttta tcaaatttaa actaaaaatt gataatatca aaacttattt
     2761 tctcttctaa atcataactt gagctcacca aaataaaaaa aattatattt ttataaagta
     2821 attttagcct acaaaaagcc cctaaaaatt ctttttgtaa aattttagcc tcaaagcgat
     2881 ttcctatttt aagctctgca taaccaaaaa tataattttt tgaagctatc caagcaaaaa
     2941 attcatcttc taaatcaagt ttttcttcta tgatatttaa atcaggtaaa atttgtgcac
     3001 ttttaaaatc aggtttaaaa taaagctctt taggatttgc atgagctaaa atttttcctt
     3061 tttctaaaaa agcgatttga tcagacatac aataagcatc ttcaatatca tgagttacca
     3121 taatagccgt aatgccttga ttttctatca tttttttcaa ttctcttctt aaatcctgtt
     3181 ttaaattttg atccaaatta gaaaaaggtt catctaaaag caaaagctta catcctcttg
     3241 ccatagctct agcaaaagcc actctttgcg cttgtcctcc tgaaatttca tcgatttttt
     3301 tatatcttaa atcttcaatt tcaaaagttt taagcaaatg atttaaaatt tgatttttat
     3361 cttttttatc ataaagtgca aaaagtatgt ttttctcaac atttaaatga ggaaataaag
     3421 cataattttg aaacatcaaa gccacttcac ctttgcaaga aaacaaatca taagaactag
     3481 cttgttcaag cttagcaata atccttaaaa gcgtgctttt tccgcttcca ctacctccta
     3541 aaatgcttaa aaattctcct tctttgacat gaagattgat attttctaaa gcttgtattt
     3601 ttccaaaatt tttagataaa tttttaattt ctaacatcat ctttccttgt gattttatcc
     3661 atccaaacaa caaccattaa agaaagaaaa acgataaaca aggaaggcaa agctgcatca
     3721 taaattcttt catcacttgc aaaccagaaa gctttaacac ttaaagtttc aaagccaaaa
     3781 ggcgctaaaa ttctacttaa aggaagttct ttaatcgtat caataaaaac aataataaaa
     3841 gccaaaaata aaaaatgttt cattaaaggt gtgtgaattt taaaaaataa aataaaataa
     3901 ctcgttctta aatttaaact tgcttcatca atatttagat gaattttatt atatcctccc
     3961 tctaaagaat aaattgcact cgctaaaaaa cgaattatat aagcaaaaac aagaacaagt
     4021 aaagaatttc ccaataaact catgtgaaaa aatttatcca aaaatacaaa aagcactata
     4081 atgctaatcc ctaaagcagc agcaggtata gaataaccca aagaacttat ttttaaaata
     4141 aataaattaa aaaaatgatt tttaactatc ctagagctaa acatcaaaaa ataagctaaa
     4201 aaagtggtaa ttaaagcagt gattaaagct aagattatag tttgaaaact gataatataa
     4261 aattgcgatt caaaaagctt atgatctttt agcccccaat aaactagcca aataaaaggt
     4321 aaaataaaac ctacaaaagc aatcataaaa caataaatac aggatagaat ttgtttaata
     4381 ggatttaatt ttcttttttt gataaaaaga gctaaatttt gattaaaact ataatgatgt
     4441 ttatttttat aataataatc cacatacata atcaaaaata caaaaagcat taaaataccc
     4501 gataaaacac tagaagaata agaatcattc aaatcatacc agagtttaaa aattccagcc
     4561 gaaaaagtat ccactcccaa ataagcactt gcaccataat cactcaaagt ttccattaaa
     4621 accaataaag ctccagaaaa aatggcaggt cttgcactca aaagtgccac gcgtgtaaaa
     4681 attctaaatt cagaatattt catgatttta gctacttcat aagcctcttt agcttcactt
     4741 ttaaaagctg ttttagcaaa taaataaata taaggatata aagaaatagc caaaacaaaa
     4801 ataacaccat aatgattgaa aaaatctatc ctaaagccaa aattttcgtg aaaaaatcct
     4861 tgaaaatcca taattcccac ataaacaaag gctaaaatat aagcaggtat ggctaagggt
     4921 aaaatgagta atttttctaa aattttacag aaataaaaat cataatttgc aatcaaataa
     4981 gcagaactca cacccaaaat caagcttaaa cacaatactc ccatgctaat tataaaagta
     5041 tctttgatga attttaaaaa taaataatca aaaaaatgac tcaaattttc tttaatagat
     5101 gaaaattggg ttaaatcact tgtattaaaa ttttgaaata aaatataaaa aagttcagca
     5161 aaaataccaa aaataggcaa aacaagaaaa agggcaagta aaattgcccc gagtttatag
     5221 tattttaggg ttttatacat tatctaaaac cgacttcatc gtaaatttta acagcttctt
     5281 taatattttc tgctatctta ctcacaggga tttgatcttc tttgaaagtt ccaaaatctt
     5341 ttaccgtttg gcttaattct acatcatttc ttataggaaa ttcataatta ctatcagtaa
     5401 gaattttttg aatttcagga cttaacataa attccataaa ttttttagcc gcatcttgat
     5461 ttttacttga ttttgtcata gcaataccgc taatgttaat atgcgttcct ctattgtctt
     5521 gattaggaaa aataataccc aaagaattcc ccacttctac atcttttgga tttttagaat
     5581 tctttaaaag ccctatataa taagtattca taactgcaaa tttagcttcg cctgcaaata
     5641 cttgtctggc ttgatctcta tccccaccct ttggatttgt cgcaagattt tcaagcacac
     5701 ctttagccca tgctttagcc tctttatttc cgtcattagc tataatagat gctaaaagag
     5761 ttttgctata aggagctgta gcacttctca taacaatttc tcctttaaat tcagcttttg
     5821 ctaaatcttc ataatttttc attttgctaa tatcgatatt tgtgtttttg ttgtaagcaa
     5881 taattcttgc tctttttgta atcgcaaacc attctttatc cttatctctt aaatgagcgg
     5941 gtataaattc ttctaaatat tttgatgaaa caggggataa aagtcctaaa ttcttagctt
     6001 ctgtaagatt tgaaatatca gctgtgatga aaatatcagc aggagaatta cttccttcaa
     6061 gagaaagtct tttaataagt tctgaagctt tagcttgagt atgattgacc ttaatacctg
     6121 ttttttcttc gaattttttt atgatttcaa aatcagcatt ataatgtctt gctgagtaaa
     6181 tattaagctc actagcacct aaaaatgaaa cagctgttaa aaacataaag aagatttttt
     6241 tcatatttta tcctttaatt gagaattata ctcggtttta ttaagatctt taaaatcggt
     6301 atgagaatgt tcagagcaag caaaagcaaa gccaacgcat agtaaaaata aaattatttt
     6361 tttcatagac attaattcct tttagatatt t
//
LOCUS       DAPIVO010000079         6259 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.079, whole genome shotgun sequence.
ACCESSION   DAPIVO010000079 DAPIVO010000000
VERSION     DAPIVO010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6259)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6259)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6259
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.079"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..1655
                     /locus_tag="RJ239_001625"
     CDS             <1..1655
                     /locus_tag="RJ239_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331726.1"
                     /translation="FIKEVKENYEFKYHDIFDDKNKVKEFVDTNKELLQGYFDKYNEI
                     LLSSEIFKKTENGEFGTHKIKELQNTLSDDRFFLASHKLLISNQEITTSENLNNLIQN
                     EIDRILENDEIKNKFDDIEKKITKNQNLKDFKEVINANKGILLKLINYEEFRKEVIFS
                     YLNKKINEIEDLVSLYENQKEKIQKIINNSKLEQESWKKIIEIFNSRFIVPFEVGIEN
                     QDDILLKNEVAKFVFKFKDNANEKIVNKEKLEEILSNGEKRALYILQILFEIEAQKNT
                     NKPILLIFDDIVDSFDYRNKHAVVEYLDDIRENINFKIIIMTHNFDFYRAIARFGASK
                     FMIHRNDEREIVFGRGEYTNEFIKSLKKNDENIKKNFITLIPFVRNILEYTKNEKDKE
                     YLLLTSCLHMKDDTKNIKVEQALNVLKNYIQEYQANINKDDNLLDFIYGTCDEIANTN
                     NINPIELQNKIVLSIGIRLKAEEFMLSKVNLQNEITRNQTRNLYNLTKEQNAINDKQD
                     FIIRKVLAITSDNIHINSFMYEPILDTSIEHLVKLYRDIKKI"
     gene            complement(1730..2431)
                     /locus_tag="RJ239_001626"
     CDS             complement(1730..2431)
                     /locus_tag="RJ239_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HDV7331727.1"
                     /translation="MKTNNIFMALAIVLASLILAFGFNKALSDFKTLERSVSVKGLSQ
                     KEIEADTLILPIKFTRSNNNLTNLYEELEQDKENIIKFLEKQGIKEDEISYNSPNIID
                     RLSDPYSNDTQAAYRYIGTANLLIYTQNVKLGKSILENISSLAKFGIVTKIDDYDIEY
                     LYTKLNDIKPQMIEEATLNARNAAIKFAQDSNSHLGKIKKASQGQFSISNRDKNTPYI
                     KTIRVVSTIEYYLKD"
     gene            complement(2428..3630)
                     /locus_tag="RJ239_001627"
     CDS             complement(2428..3630)
                     /locus_tag="RJ239_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HDV7331728.1"
                     /translation="MQKHTKIHGFAKFKLIVILALMSSIAPLSTDMYLPALSHVEQSF
                     QTNSFLTQLSIASFFIAFALGQLIYGPLSDIFGRKIPALVGIFFFIVSSLFCVIIDDI
                     YAFIALRFFEALGGCAGVVIARAIINDLFEIKEAAGIFALMMVFSSLAPMLSPTFGGI
                     LLEYFSWHSIFATLFALGILLFLMILFGLKESAPHLKNKKISHHEAMKSYKFVLSDKR
                     FLVYILCASFALAAMFAYITGSSFVFTQFFSLSEQKFALLFGANALGFVICANINARL
                     VLKYESEKILAKALMIMFISTVILLVNAFFHPNFLLFELSIFTSIAMLGFIAPNTTTL
                     AMARFKEHSGTASAVLGTVQFGFAGLISFVVGAINANTPIILAFVMCACVLVANMIYF
                     LIKIKEKK"
     gene            3733..5082
                     /locus_tag="RJ239_001628"
     CDS             3733..5082
                     /locus_tag="RJ239_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2130 domain-containing protein"
                     /protein_id="HDV7331729.1"
                     /translation="MQNLNQNEQIKCPSCGSFIDISTALYAQILDKAKQEMLKQKKEF
                     DDEVNAKRAEYIKALNDLKTQKIEQEKLINEQVSQKLLLEKQKFEQELLIQKQNFQKE
                     FSEKFNKEHENEMKIMQEELEKKSKELSEFLSIKAENERLKREQKENEERLKFQAKEE
                     AFKEFKEQENKNLEFEREKMRLEFQKSTQEQDLKYKELETNFKSVAQKLEDAQRRIEQ
                     GSQQLQGEAAELLIEEYIQSEYLSDEVKEVPKGVNGADCLHIVKDNFGNICGSILYES
                     KRTKEFNKEWLDKLKLDSIAAKSDIAVLITKTMPKDKEKTHFKEGILICTFNEFKGVL
                     AVLRESIINAYKLKNALQNKDEKNHILYEYLNSKEFNTQITFILKTYQNMKEELEAEK
                     RALQNIWKKRERAIENLSFNSTAIVSSLNAIFSDLQGGNLIGEEGIKSLENLAKDED"
     gene            complement(5106..6149)
                     /locus_tag="RJ239_001629"
     CDS             complement(5106..6149)
                     /locus_tag="RJ239_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDV7331730.1"
                     /translation="MKKHILLLGLCLSLSLSAKSMSDYKVGEELSDKEGVEYFKELSK
                     RPVQEWPNKNLSINDVPKGKQGDLIRYGIELLSKTESTLGPYSKLKKTSNEVNCISCH
                     MDNDGNGLPGTKKYVIPFLNVLNNYPKLDIETMKIISVEDRIRGMGGTDSHRFPNDSK
                     EMKAILAYFKWLKEAYGIKDGVKLEGDFFAKMNFPNRPADPVRGKKLFEENCVACHGE
                     RGLGVKNDNYEQGSGHLYPSLLIYPDGGHMAMIPFLARFLKSAMPFGASADNPILSDE
                     DALDIAAYVNTGFVRMPITTTENRAGLDTAYSKSPSLKPEYFASPQQNLDPKEYIKVK
                     YGPWKNPNHFPGE"
BASE COUNT         2433 a          898 c          985 g         1943 t
ORIGIN      
        1 attttataaa ggaagtaaaa gaaaattatg agtttaaata ccatgatatc tttgatgata
       61 aaaacaaagt aaaagaattt gttgatacaa acaaggagct tttacagggc tactttgata
      121 aatataatga aattttatta tcatctgaaa ttttcaaaaa aacagaaaat ggagaatttg
      181 gaacacataa aattaaagaa ctgcaaaata ccttaagtga tgatagattt ttcttagcaa
      241 gtcataaatt attaatttct aatcaagaga taacaacaag tgaaaattta aacaatttaa
      301 tacaaaatga aattgataga attttagaaa atgatgagat aaaaaataaa tttgacgata
      361 ttgaaaaaaa gattacaaaa aatcaaaatt taaaagactt caaagaagta attaatgcga
      421 ataagggaat cttattaaaa ttaattaatt atgaagaatt tagaaaagaa gtaatattct
      481 cgtatcttaa taaaaaaata aatgaaattg aagatttggt ttcgttatat gaaaatcaaa
      541 aagaaaaaat acaaaaaatt ataaataatt caaaattaga acaagaatca tggaaaaaga
      601 ttatagaaat attcaatagc agatttatag ttccttttga agttggcata gagaatcaag
      661 atgatatttt attgaaaaat gaagtagcaa aatttgtttt taaatttaag gacaatgcaa
      721 atgaaaaaat tgttaataaa gagaaactag aagagatttt aagcaatgga gaaaaaaggg
      781 ctttgtatat tttgcaaata ttatttgaga tagaagctca aaaaaataca aataagccta
      841 ttttacttat atttgatgac attgtagatt cttttgatta tagaaataaa catgctgttg
      901 tggagtatct cgatgatata cgagaaaata taaattttaa gattataatt atgacacata
      961 attttgattt ttatagagct atagcgagat ttggtgcatc aaaatttatg atacatagaa
     1021 acgatgaaag ggagattgta tttggaagag gtgagtatac taatgaattt ataaaatctc
     1081 ttaaaaaaaa tgatgaaaat attaaaaaga attttattac tttgatacct tttgttagaa
     1141 atattttaga atataccaaa aatgaaaaag ataaagagta tttattatta acaagttgtc
     1201 tacatatgaa agatgataca aaaaatataa aagtggaaca agcattgaat gttttaaaaa
     1261 actatattca agaatatcaa gccaatataa ataaagatga taatttacta gactttattt
     1321 atggcacttg cgatgaaatt gcaaatacta ataatattaa tcctatagaa ttgcaaaata
     1381 aaatagtctt atcaatcgga attagattaa aagcagaaga atttatgtta tctaaagtaa
     1441 atttgcaaaa tgaaattacc agaaatcaaa ctagaaattt atataattta accaaagaac
     1501 aaaatgcaat aaatgataaa caagacttta taattagaaa agttttagca ataacttcag
     1561 ataatattca tataaattct tttatgtatg agcctatctt agatacatct atcgaacatc
     1621 tagtaaaatt atatcgtgat ataaaaaaga tttaaataag cataaaaacc gcacgaaaaa
     1681 attccatagt gccaagctaa gccttaaagc ttagcttgaa attttatcat cagtctttta
     1741 agtagtattc tatagtagaa accactctta tggttttgat ataaggggtg tttttatctc
     1801 tgttgctgat gctaaattgt ccttgagaag ccttttttat cttgcctaga tggctgtttg
     1861 agtcttgtgc gaattttatc gctgcatttc tagcattgag cgttgcttct tctatcattt
     1921 gtggttttat atcatttagc ttggtgtaaa ggtattctat atcataatca tcgatttttg
     1981 ttactatacc aaattttgca agacttgaaa tgttttctag tatgcttttt ccaagcttta
     2041 cattttgagt atagatgagt aaattcgcag tgcctatgta tcggtatgca gcttgagtgt
     2101 cgttgctata aggatcgctt aaacgatcta tgatatttgg cgagttgtag ctgatctcat
     2161 cttcttttat gccttgtttt tctaaaaatt tgatgatatt ttctttatct tgttctagtt
     2221 cttcgtataa atttgtaaga ttattgtttg atcttgtgaa ttttatagga agtatcaaag
     2281 tatccgcttc gatttctttt tgacttaaac cctttacact tacacttctt tcaagtgttt
     2341 taaaatcact taaagccttg ttaaatccaa aagctagaat caaacttgcc aaaactatgg
     2401 ctaaagccat aaagatatta tttgttttca ttttttctcc tttattttga ttagaaaata
     2461 tatcatattt gcaaccaata cgcaagcaca cattacaaaa gcaaggatta tcggcgtatt
     2521 tgcgttaata gccccaacca caaaagaaat aagccctgca aaaccaaatt gcaccgttcc
     2581 aagcaccgca gaagcagttc cgctatgttc tttaaacctt gccatagcca aagtcgtggt
     2641 attgggtgcg atgaaaccaa gcatagcgat acttgtaaaa atactaagtt caaaaagcaa
     2701 gaaatttgga tgaaaaaagg catttacaag taaaatcacg gtcgatataa acattatcat
     2761 caaagctttt gccaaaattt tttcgctttc gtattttaaa accaatctcg cattgatatt
     2821 tgcacagatg acaaaaccta aagcatttgc cccaaaaagc aaggcaaatt tttgctcact
     2881 taagctaaaa aactgcgtaa aaacaaagct tgatcctgtg atataagcaa acatcgccgc
     2941 caaagcaaaa gaagcacata gtatataaac caaaaagcgt ttatcgctta aaacaaattt
     3001 gtagcttttc atcgcttcat gatgggaaat ttttttgttt ttaagatgag gtgcggattc
     3061 ttttaaacca aaaagtatca tcaaaaaaag taaaattcct aaagcaaaca aagtcgcaaa
     3121 aatactatgc catgaaaaat actctagtaa aattccccca aaggttggtg aaagcatagg
     3181 agcaagagaa ctaaaaacca tcatcaaagc aaaaatccct gcagcttctt tgatctcaaa
     3241 caagtcattg ataatagccc ttgcgataac cacacctgca caacccccaa gtgcttcaaa
     3301 aaatctcaaa gcgataaaag cataaatatc atcgataatc acacaaaaca aactcgaaac
     3361 gatgaagaaa aatatcccca ccaaagctgg aattttacgc ccaaaaatat cacttaaagg
     3421 cccatatata agctgtccta aagcaaaagc gataaaaaaa cttgcgatac taagttgggt
     3481 taaaaaagaa ttagtttgaa aactttgctc cacatgagaa agtgcaggca aatacatatc
     3541 tgtagaaagt ggtgctatgc ttgacatcaa agcaaggata acgatgagtt taaatttagc
     3601 aaagccgtga attttggtgt gtttttgcat ttgtaatcct aattattcta aaagaatgat
     3661 tttaacaagt caatcttaga ataatctttg tttttctatg ttaaatttag ggaaaaattc
     3721 taaggaaatt ttatgcaaaa tttaaaccaa aatgaacaaa tcaaatgccc aagttgtgga
     3781 agttttatcg atatcagcac tgctttatat gctcaaattt tagataaagc taagcaagaa
     3841 atgctaaaac aaaaaaaaga atttgatgat gaggtaaatg ctaaaagagc tgaatatatc
     3901 aaagctttaa atgatttaaa aactcaaaag atagaacaag aaaaactcat aaacgagcaa
     3961 gtaagccaaa agcttctttt agaaaagcaa aaatttgaac aagaacttct tatacaaaag
     4021 caaaatttcc aaaaagaatt cagcgagaaa tttaacaaag agcatgaaaa tgaaatgaaa
     4081 atcatgcaag aagaactcga gaaaaaaagc aaagagctta gcgagttttt aagcataaag
     4141 gctgaaaatg aaagacttaa aagagaacaa aaagaaaatg aagaaagact gaaatttcaa
     4201 gccaaagaag aggcttttaa agaatttaaa gaacaagaaa acaaaaattt ggaatttgaa
     4261 agagaaaaaa tgcgtcttga atttcaaaaa agcactcaag agcaagatct taaatacaaa
     4321 gaactagaaa cgaattttaa aagcgtagcc caaaagctag aagacgcaca acgcaggata
     4381 gaacaaggct cacagcaact ccaaggcgaa gcagctgaac tactcataga agaatacata
     4441 caaagtgagt atttaagcga tgaagtaaaa gaagtgccaa agggcgtaaa tggagctgat
     4501 tgtctgcata tagtaaagga taattttgga aatatttgtg gaagtatttt atatgagagc
     4561 aaacgcacta aagaatttaa taaagaatgg cttgataaac ttaaactaga cagtatagcc
     4621 gcaaaaagtg atatagcggt tttgatcaca aaaactatgc caaaagataa agaaaaaacg
     4681 cattttaaag aaggaatttt gatttgtact tttaatgaat tcaaaggcgt tttagcagtg
     4741 cttagagaaa gcattataaa cgcttataaa ctcaaaaatg ccttacaaaa caaagatgaa
     4801 aaaaatcaca ttttatacga atacttaaat tccaaggaat ttaacacgca aattactttt
     4861 atactcaaaa cttaccaaaa tatgaaagaa gaattagaag ctgaaaaaag agctttgcaa
     4921 aatatatgga aaaaaagaga aagagctata gaaaatctaa gttttaattc cactgccata
     4981 gtgagttctt taaatgcgat atttagtgac ttacaaggtg gaaatttgat aggcgaagaa
     5041 gggattaaaa gtcttgaaaa tttagccaaa gatgaggatt aattttgggc taagcccaaa
     5101 attaatcatt ctcctgggaa gtgatttgga tttttccaag gtccgtattt tacttttatg
     5161 tattctttag ggtctaaatt ttgttgtggt gaagcaaaat actcaggttt taatgatggg
     5221 gatttgctat aagctgtatc aagtcctgca cgattttctg tagtggttat aggcattctt
     5281 acaaaacctg tattgacata agctgctata tccagtgcat cttcatcgct taatatagga
     5341 ttatctgcac tcgcaccaaa aggcatggct gattttaaaa atcttgctaa aaatggtatc
     5401 atagccatgt gtccaccatc aggatagata agtaaagatg gatataaatg tccgctacct
     5461 tgttcgtaat tatcattttt taccccaagt cctctttcgc catggcaagc aacgcaattt
     5521 tcttcaaaga gtttttttcc acgcacaggg tcagctgggc gatttggaaa attcatctta
     5581 gcgaaaaaat ctccttcaag ctttacgccg tctttgatgc cataagcttc ttttagccat
     5641 ttaaaataag ctaaaattgc tttcatttct ttagaatcat taggaaatct atgagagtca
     5701 gttccaccca ttccgcgaat tctatcttca acagagatga ttttcatcgt ttctatatca
     5761 agttttggat aattgtttag gacatttaaa aatggaataa catatttttt tgtccctggt
     5821 aaaccattgc cgtcattgtc catgtgacag gaaatacagt ttacttcgtt gcttgtcttt
     5881 tttagcttgc tatagggtcc tagagtactt tctgtcttgc ttaaaagctc tatgccataa
     5941 cggattaaat ccccttgctt accttttgga acatcattga tgcttaaatt tttatttggc
     6001 cattcttgca caggtctttt ggaaagttcc ttaaaatact ctactccttc cttgtcgctt
     6061 aattcttctc ctactttgta atcactcatg cttttagcac taagactcaa actaagacat
     6121 aaaccaagca ataaaatgtg ttttttcatg attttcctcc tttttatttg cagttcaaat
     6181 tgattttagt gtattttttc ttaaatatta agcataataa gaataattta aataaaatta
     6241 aattttagag tgttactaa
//
LOCUS       DAPIVO010000080         5815 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.080, whole genome shotgun sequence.
ACCESSION   DAPIVO010000080 DAPIVO010000000
VERSION     DAPIVO010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5815)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5815)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5815
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.080"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            63..758
                     /locus_tag="RJ239_001630"
     CDS             63..758
                     /locus_tag="RJ239_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HDV7331731.1"
                     /translation="MTQEELDALMNGDVDLDSETEAEVKTEESNTEEDALMLEDVKIA
                     DYKPNPSVVWPPPPPNQEHKVVHQLDDVTKDSELKATEMMDKLESINNFFADSESLLK
                     EINKAIEKNIDIFSKLNEKFPNVESFSEVLELNNQAKKSSKEIVGNLQSGQDEVMMAM
                     DAMQYQDIHRQKIERVINVMRALSRYMSSLFEGKIDDKKRVSSAVHIEGDSTADVVSN
                     DDIEALIASLGQK"
     gene            755..2008
                     /locus_tag="RJ239_001631"
     CDS             755..2008
                     /locus_tag="RJ239_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HDV7331732.1"
                     /translation="MIIPEIVAPAGNFTKLKIALAYGADAVYAGVNNFSLRSRTAREF
                     NYESFEEAIKYTHERGKKIYVTLNGFHLSSQIEGLKRHILKLREMKPDAFIVASVGAM
                     RLVKELAPEISLHVSTQANILNYLDAQVYKDMGAKRVVIARELGLKDAKALKENCDIE
                     LEAFVHGSMCFAYSGRCLISSVQSGRMSNRGSCANDCRFNYELYAKNPENGTLFRLEE
                     DENGTHIFNSKDLNLCSYIEKIMQENCISAFKIEGRTKSEYYVALTTRTYKMAIQDAL
                     EGKFESSKYEKEIATLKNRGFTDGYLVSRPLEKTDTQNHNTSIEEGSHQVHAISEDGR
                     FFKCKGKIVLNTPYEILTPLGDVIQTCDNELGKIYQKEGKYFIEFKKLIAKNNKEFSE
                     IHSGNEHEIQLPNKISALSFLRKEI"
     gene            2009..2503
                     /gene="purE"
                     /locus_tag="RJ239_001632"
     CDS             2009..2503
                     /gene="purE"
                     /locus_tag="RJ239_001632"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HDV7331733.1"
                     /translation="MNFVSILMGSKSDYETMKEAAKTLESFGVKYELIISSAHRSPKR
                     TKEYIANAEEKGVKVFIAAAGMAAHLAGAVAAYTTKPVLGVPMSGSNLASMDSLFSTV
                     QMPSGIPVGTLAIGKAGAINAAYLAMQILAIYDVDLAQKLKEDRLEKEKKLVSDSKEV
                     EVLL"
     gene            2513..3049
                     /locus_tag="RJ239_001633"
     CDS             2513..3049
                     /locus_tag="RJ239_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3972 domain-containing protein"
                     /protein_id="HDV7331734.1"
                     /translation="MQTYLELEEFCKLVHLNEDVVKGMMANGALNFKEEEGKIYIEAH
                     QGTFSVVPSSAKSQTAMVNSMTLAGESFVEKTIGTILNLHEKVLDAKDETLEALKNEN
                     KFLKDALYSMQELYDEDRKTIETLNNELKHAREEIEFLKRKYKLMWSKTAEIFGAKTE
                     PDLEMNKNLEKPIENMEQ"
     gene            3061..3924
                     /gene="glyQ"
                     /locus_tag="RJ239_001634"
     CDS             3061..3924
                     /gene="glyQ"
                     /locus_tag="RJ239_001634"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HDV7331735.1"
                     /translation="MTFSQMILNLQNYWQEQGCAIMQPYDMPAGAGTFHPATFLRSLG
                     KKPWAAAYVAPSRRPTDGRYGENPNRLGAYYQFQVLIKPSPDNIQELYLKSLENLGFD
                     LKSHDIRFVEDNWESPSLGAWGLGWEVWLDGMEVTQFTYFQQVGGIAVDLVSAEITYG
                     LERIAMYLQNVDNVYDIVWSEFNGEKIKYADVHKQSEYEFSKYNFEVSDVKILNEQFE
                     NSYKECKNILEQGLALPAYDYCMLAAHTFNLLDARGAISVAQRQDYMLKIRELSKNCA
                     EIYKKNLNEAE"
     gene            3911..4636
                     /locus_tag="RJ239_001635"
     CDS             3911..4636
                     /locus_tag="RJ239_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HDV7331736.1"
                     /translation="MKLSEIYNFLDQLSPFNIQESWDNSGILLGDRDSEISTVYLSLD
                     IDENIIKEASENSLIITHHPLIFKGLKDLYDKTYPRAFIKEMIYKNISLISMHTNYDL
                     SHLNTYFTEEILGFKISFKDKFLIYVENSMSFEALCDWVKKKLNLQILRVSDCGKKDI
                     KRIAICTGSGGDLISKVDADCFLSGDFKYHQALEALSNQISLIDLGHFESERYFSQCL
                     AKDLKNLPLQVIITVSKNPFQYF"
     gene            4646..5362
                     /locus_tag="RJ239_001636"
     CDS             4646..5362
                     /locus_tag="RJ239_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HDV7331737.1"
                     /translation="MNKYLEQLVLLSKIDQEIDSYEPKIDSINKTLKDAELKIEKINA
                     DLEKIDEEIKDIENQKIQNNAHISEFSAKIKDLSKKSGVVKTEKEANALKIEEDIAKE
                     QLDAANDEIVRLDKILENKETYKKELEEEKIKQEQNINEIRVSIKSEMEVLEKDRMSV
                     YDKKTKLVSEMNQKVLSFYEKIRKWAKNTAVVPVKKQACYGCFMKIYDKTYLSVVKGE
                     EIVTCPHCGRILYKEQEEQN"
     gene            5359..>5815
                     /locus_tag="RJ239_001637"
     CDS             5359..>5815
                     /locus_tag="RJ239_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HDV7331738.1"
                     /translation="MIFFYYFLTWTAFLFCAVFILLLSFLKSKYKISLKSRFFLYKNL
                     HQEKADVHFHACSYGEVRSIKALVLKFDSRITTITQTGFECAKEFCKKVNYLAFENFL
                     PFWLKPCKVLVIFEAEYWLMLVFMARIYKAKIILLNARISDKSYHSYQRF"
BASE COUNT         2162 a          667 c         1103 g         1883 t
ORIGIN      
        1 agataaaatt gattataatt ttgagcaatt attgaaaatc tagatttaaa aaagggaaaa
       61 aaatgactca agaagagctt gatgctttga tgaatggtga tgttgatctt gattcagaga
      121 cagaagcaga ggtaaaaacc gaagaatcga ataccgaaga agatgctttg atgttagaag
      181 atgtcaaaat agctgattac aaacctaatc ctagtgtagt atggccacca cccccaccaa
      241 atcaggagca taaagttgta catcagttag atgatgttac aaaagatagc gagcttaaag
      301 caacggaaat gatggataag cttgaaagta ttaataattt ttttgcggat tctgaaagtt
      361 tactcaaaga aataaataaa gcaatagaaa aaaatattga tattttttct aaacttaatg
      421 aaaaatttcc taatgtggaa agtttcagtg aagttttaga attaaacaat caagctaaaa
      481 aaagttctaa ggagattgtc ggaaatcttc aaagcggaca agatgaagtg atgatggcaa
      541 tggatgcaat gcagtatcaa gatatacatc gtcaaaaaat cgaacgtgtt attaatgtaa
      601 tgcgtgcttt aagccgttat atgagttcct tatttgaagg taaaattgat gataaaaaac
      661 gtgtaagttc tgcagtgcat attgaaggtg atagtactgc tgatgttgta agtaatgatg
      721 atatagaagc tttaattgca agtttagggc aaaaatgatc attcctgaaa tagtagctcc
      781 tgcaggaaat ttcacaaaat taaaaattgc tttagcttat ggcgcagatg cggtttatgc
      841 gggtgtgaat aatttttctt taagatcacg cactgcaaga gaatttaatt atgaaagttt
      901 tgaagaagct atcaaatata ctcatgagcg tggtaagaaa atttatgtta ctttaaatgg
      961 ttttcatttg agttctcaaa ttgaaggttt aaaaagacat attttaaaat tgcgtgagat
     1021 gaaacctgat gcttttattg tagcttctgt tggagctatg cgtcttgtta aagaacttgc
     1081 acctgaaatt tctttacatg tttctactca ggcaaatatt ttaaattatt tagatgctca
     1141 agtttataag gatatgggtg ctaaaagggt tgtaattgcc agagaattag ggcttaaaga
     1201 cgctaaagct ttaaaggaaa attgcgatat tgaacttgaa gcttttgtgc atggttctat
     1261 gtgttttgct tattcagggc gttgtttaat aagctctgtg caaagtggaa gaatgagcaa
     1321 tcgtggatct tgtgcaaatg attgtagatt taattatgag ctttatgcta aaaatccaga
     1381 aaatggcact ttatttcgct tagaagaaga tgaaaatggt actcatattt ttaattctaa
     1441 agatttaaat ctttgttctt atatagaaaa aatcatgcaa gaaaattgta tcagtgcttt
     1501 taaaatagaa gggcgtacta aaagcgaata ttatgttgcg cttacaacaa ggacttataa
     1561 aatggccata caagatgctt tagagggtaa atttgagtca agtaagtatg aaaaagagat
     1621 tgctacactt aaaaatcgtg gttttacaga tggctatctt gtttcgcgtc ctttagaaaa
     1681 aaccgacaca caaaatcata atacaagcat agaagaaggt tctcatcaag tgcatgctat
     1741 aagcgaagat ggaagatttt ttaaatgtaa agggaaaatc gttttaaaca cgccttatga
     1801 aattttaacc cctttaggcg atgtgattca aacttgcgat aatgaactag gtaaaattta
     1861 tcaaaaagag ggtaaatatt ttatagagtt taaaaaactt attgctaaaa acaataaaga
     1921 atttagcgaa attcatagcg gtaatgaaca tgaaatccaa ttaccaaata aaatcagtgc
     1981 attaagtttt ttaagaaagg aaatatagat gaattttgtt tctattttaa tgggaagcaa
     2041 gagtgattat gagactatga aagaggctgc taaaacttta gaaagttttg gtgtaaagta
     2101 tgaacttatc atctcatcag ctcatcgtag tccaaaaaga acaaaagagt atattgcaaa
     2161 tgctgaagaa aaaggtgtga aggtttttat agcagcagct ggaatggcag cgcatttagc
     2221 tggagctgtt gcagcttata caacaaaacc tgttttagga gtgcctatgt caggaagcaa
     2281 tcttgcaagt atggattctt tgttttctac ggtgcaaatg cctagtggaa ttcctgtagg
     2341 aactttagct attggtaagg ctggagcaat caatgctgct tatttggcta tgcaaatttt
     2401 agctatttat gatgttgatt tagcacaaaa gcttaaagaa gatcgtcttg aaaaagaaaa
     2461 aaaacttgta tctgattcaa aagaagtaga agttttatta taagggataa aaatgcaaac
     2521 ctatcttgaa cttgaagaat tttgtaaact tgtgcattta aatgaagatg tggttaaggg
     2581 tatgatggcc aatggggctt taaattttaa agaagaagag ggtaaaattt acatcgaagc
     2641 ccatcaaggt acttttagtg tagtgcctag ttctgcaaaa tctcaaactg caatggtaaa
     2701 ttcaatgact ttagcaggag aaagttttgt tgaaaaaaca ataggaacta ttttaaattt
     2761 acatgaaaaa gttttagatg ctaaagatga aacacttgaa gcattaaaaa atgaaaataa
     2821 atttttaaaa gatgcccttt attctatgca agagctttat gatgaagata gaaaaactat
     2881 agaaacctta aacaatgagt taaaacatgc gcgtgaagag atagaatttc tcaagcgtaa
     2941 atataaatta atgtggagta aaactgcaga aatttttgga gctaagacag agcctgattt
     3001 ggaaatgaat aaaaatttag aaaaacctat tgaaaatatg gaacaataaa gagagataca
     3061 atgacttttt cacaaatgat acttaattta caaaattatt ggcaagagca aggttgtgcg
     3121 attatgcaac cttatgatat gccagcaggt gcaggaacct ttcatccagc aactttttta
     3181 agaagtttag gaaaaaaacc ttgggcagct gcttatgtgg ctccaagtag aaggcctact
     3241 gatggacgtt atggtgaaaa tcctaatcgc ttaggtgctt attatcaatt tcaagtttta
     3301 attaaaccta gtcctgataa tattcaagaa ttatatctta aaagtcttga aaatttgggt
     3361 tttgatttaa aaagtcatga tattcgtttt gttgaagata attgggagag tccaagtttg
     3421 ggtgcttggg gtttaggctg ggaagtatgg cttgatggta tggaagttac tcaatttact
     3481 tattttcagc aagttggcgg tatagcagta gatttagtaa gtgctgaaat tacctatggt
     3541 cttgaaagaa tagccatgta tcttcaaaat gttgataatg tttatgatat agtttggagt
     3601 gaatttaatg gagaaaaaat taaatacgca gatgtgcata agcaaagtga atatgaattt
     3661 agtaaataca attttgaagt aagtgatgtt aaaatcttaa atgagcagtt tgaaaattct
     3721 tacaaagaat gtaaaaatat tttagaacaa ggactagctt tacctgctta tgattattgt
     3781 atgcttgctg cacatacttt taatctttta gatgcaagag gagcaatttc tgtagcacaa
     3841 agacaagatt atatgttaaa aattcgtgaa ctttcaaaaa attgtgctga aatttataag
     3901 aaaaatttaa atgaagctga gtgaaattta taatttttta gatcaattaa gtccctttaa
     3961 tatccaagaa tcatgggata atagtggaat tttgcttgga gatagggata gtgaaatttc
     4021 aactgtttat ttaagcttag atattgatga aaatatcatt aaagaagcga gtgaaaattc
     4081 tttaattatc acacaccatc ctttgatatt taaaggttta aaagatttat atgacaagac
     4141 ttatcctagg gcttttatca aagaaatgat ttataaaaat atttctttaa tcagtatgca
     4201 tacaaattac gatttaagtc atttaaatac ttattttacg gaagaaattt taggttttaa
     4261 aatttctttt aaagataaat ttttaattta tgtggaaaat tctatgtctt ttgaagcttt
     4321 gtgtgactgg gtgaaaaaaa agttaaattt gcaaatttta cgtgtaagtg attgtggcaa
     4381 aaaagacatt aagcgcattg ctatatgtac tggaagtggc ggggatttaa tttctaaagt
     4441 agatgcggat tgttttttaa gtggagattt taaatatcat caagctttag aggcgcttag
     4501 taatcaaatc agtcttattg atttgggtca ttttgaaagt gagagatatt tttctcaatg
     4561 tttagcaaaa gacttgaaaa atttgccgct acaagttata ataacagttt caaaaaatcc
     4621 atttcaatat ttttaaggaa aataaatgaa taaatatctc gaacaattag tgcttttatc
     4681 aaaaatagat caagaaattg atagttatga accaaaaata gacagtatta ataagacttt
     4741 aaaagatgct gagttaaaaa tagaaaaaat caacgcagat ttagaaaaaa tcgatgaaga
     4801 aatcaaagat atagaaaatc aaaaaataca aaataatgct catatttccg agttttcagc
     4861 aaaaattaaa gatctttcta aaaaaagtgg tgtggtaaaa acagaaaaag aagctaatgc
     4921 tttaaaaatt gaagaagata ttgcaaaaga gcaattagac gctgcaaatg atgagattgt
     4981 aagactagat aaaattttag agaataaaga aacttataaa aaagaacttg aagaagaaaa
     5041 aatcaaacaa gagcaaaata ttaacgagat tagagtaagc attaaatctg aaatggaagt
     5101 tcttgaaaaa gatagaatga gtgtttatga taaaaaaact aaacttgtga gtgagatgaa
     5161 tcaaaaagtt ttaagttttt atgagaaaat tcgcaaatgg gcgaagaata ctgctgtagt
     5221 tcctgttaaa aaacaagcat gctatggatg ttttatgaaa atttacgata agacttatct
     5281 gtccgttgta aaaggtgaag agattgtaac ttgtcctcat tgcggaagaa ttctttataa
     5341 agagcaagaa gaacaaaatt gatctttttt tattattttt taacttggac ggcattttta
     5401 ttttgtgccg tctttattct tttactttct tttttaaaat ccaaatacaa aattagttta
     5461 aaatctcgat tttttcttta taaaaattta catcaagaaa aagctgatgt acattttcat
     5521 gcttgttctt acggggaggt aagaagtatt aaagctttgg ttttgaaatt tgattcaaga
     5581 ataactacta ttactcaaac aggttttgaa tgtgcaaaag aattttgtaa aaaggtaaat
     5641 tatcttgctt ttgaaaattt tttgcctttt tggcttaagc cttgtaaggt tttggtaatt
     5701 tttgaagcag aatattggct tatgcttgtt tttatggcac gtatttataa ggctaagatt
     5761 attttgctta atgcgagaat atctgataag tcttatcatt cttatcaaag atttt
//
LOCUS       DAPIVO010000081         5304 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.082, whole genome shotgun sequence.
ACCESSION   DAPIVO010000081 DAPIVO010000000
VERSION     DAPIVO010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5304)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5304)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5304
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.082"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            23..1066
                     /gene="dnaJ"
                     /locus_tag="RJ239_001638"
     CDS             23..1066
                     /gene="dnaJ"
                     /locus_tag="RJ239_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002859317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HDV7331739.1"
                     /translation="MALKYHPDRNQGDKEAEDKFKLVNEAYEVLSNDEKRAIYDRYGK
                     DALKGGGFGSSSSGFGGFEDLGDIFSSFFGEGFGSSRRRKSSNDEKIPSDFIVNLKLS
                     FKEAVFGCKKNIDFTYKCSCKTCNGTGAKDGKLQTCPKCQGRGQVGVSQGFITFAQTC
                     PDCQGSGEKASEKCSDCKGLGYNESKDSVELNIPEGVDTGMKLRVNAKGNILKNGTRG
                     DMYVKIIAAEDDTFIRDDDDIYIEFPVFFTQAILGESIKVPTIRGEATLNLPKGAKDG
                     QRFVLEKEGVKDVHNSRMGNQIVQISIKFPTSLNDEQKELLEKLSESFGIKDGMHQEQ
                     KGLFEKITNWFKS"
     gene            complement(1181..2458)
                     /gene="porA"
                     /locus_tag="RJ239_001639"
     CDS             complement(1181..2458)
                     /gene="porA"
                     /locus_tag="RJ239_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group 1 major outer membrane porin protein PorA"
                     /protein_id="HDV7331740.1"
                     /translation="MKLVKLSLVAALAAGAFSAANATPLEEAIKDVDVSGVLRYRYDT
                     GNFDKNFVNNSNLNNSKQNHKYRAQVNFSAAIADNFKAFIQFDYNAADGGYGANGIKN
                     DQKGLFVRQLYLTYTNEDVATSVIAGKQQLNTIWTDNGVDGLVGTGIKVVNNSIDGLT
                     LAAFAVDSFMAKEQGADLLGKSTISTTQETAPFQADSLGNLYGAAAVGSYDLAGGQFN
                     PQLWLAYWDQVAFFYAVDAAYSTTIFDGINWTLEGAYLGNSLDSELDDKRHANGNLFA
                     LKGSIEVNGWDASLGGLYYGDKEKASTVVIEDQGNLGSLLAGEEIFYTTGSRLNGDTG
                     RNIFGYVTGGYTFNETVRVGADFVYGGTKTEATNHHLGGGKKLEAVARVDYKYSPKLN
                     FSAFYSYVNLDQGVNTNESADHSTVRLQALYKF"
     gene            complement(2710..3165)
                     /locus_tag="RJ239_001640"
     CDS             complement(2710..3165)
                     /locus_tag="RJ239_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HDV7331741.1"
                     /translation="MKKILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSG
                     EHDGEGMHYGTKNKLAQLNIEHKNFTSKKLTQKLCDESDFLITMDNSNFKNVLKNFTN
                     TQNKVLKITDFSPSLNYDEVPDPWYSGNFDETYKILSLACKNLLVFLSK"
     gene            3219..4403
                     /locus_tag="RJ239_001641"
     CDS             3219..4403
                     /locus_tag="RJ239_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7331742.1"
                     /translation="MENFNRTLLVCWFGVFTTSMGLSQIAPILPFYIKELGHVDTSEI
                     AFYSGLAFGITPLFMAVFSPLWAFLGAKYGYKNMLLRASFGMSVLTLWLSFAHSALEV
                     VFVRGLTGIISGFTSAAVVFIAVIAPKEKVAYALGTLSTASISGSLLGPLFGGFVAEF
                     FSISAVFDVVAFLIACSFVTIYFFIHGRKIQKEAKKNTQKVKENKTLIIVLFITTFVI
                     QFGTFGVMPILSIYVEQIHQGGNLALWAGIVVAASGISNLFFAPKLGKIADKIGPSKI
                     IFGALIFCGICFYLQAVASNVYTLIFVRLLIGVGLGGLLPCVNALLKKSVSAKNLSVI
                     FGFNQTCQFLGNFCGAFGGGLMASHFSVEFVFTFVCLIFIINAFIFLAFEKKYIFSNQ
                     GL"
     gene            4421..5083
                     /locus_tag="RJ239_001642"
     CDS             4421..5083
                     /locus_tag="RJ239_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HDV7331743.1"
                     /translation="MEMILFVLVMILLVLLFVVLFRQYKSPKIEEKSTQSFSDIMQLK
                     SIGELSVFQVFSKEIVTKKDSAFNGIWKNLLGWSLSERQIALIFEFEITFLYDLRDKN
                     FDILPLGDDAYKIIMPECRYKHSIIDMKFYDEKNAKFLPFLLPDSINSTGISFSESDK
                     NKLIKEAKDEVKDLSLNLIQNLESKIHKSAKDTLEAIAKGFGAKRVEFEFKDNTQKLD
                     VS"
     gene            complement(5080..5289)
                     /locus_tag="RJ239_001643"
     CDS             complement(5080..5289)
                     /locus_tag="RJ239_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HDV7331744.1"
                     /translation="MPFVNIRITKENGEPTTEQKQELIAGVTDLLAKVLNKNKSSTVV
                     IIDEIDTDNYGLGGKSITQARKEKS"
BASE COUNT         1651 a          776 c         1016 g         1861 t
ORIGIN      
        1 cataaaaaaa gcctatagaa aaatggcttt aaaatatcat cctgatagaa accaaggtga
       61 taaagaagca gaagataaat tcaagcttgt taatgaagcc tatgaagttt taagcaatga
      121 tgaaaagcga gctatttatg atagatacgg aaaagatgct ttaaaaggcg gtggatttgg
      181 ttctagtagc tcaggttttg gtggttttga ggatttagga gatatatttt ctagtttttt
      241 tggagaaggc tttggctcat cacgtcgtag aaaaagttca aatgatgaga aaatcccttc
      301 agattttatc gttaatttaa aattaagttt taaagaagcg gtttttggtt gtaagaaaaa
      361 tatagacttt acttataaat gctcttgtaa aacttgtaat ggaacagggg ctaaagatgg
      421 aaaacttcaa acttgtccaa aatgtcaagg taggggacaa gttggagttt ctcaaggttt
      481 tatcactttt gcacaaactt gtcctgattg tcaaggaagt ggagaaaaag ctagtgaaaa
      541 atgtagtgat tgtaaaggtt tgggttataa tgaaagcaaa gatagtgtcg agcttaatat
      601 cccagaaggt gtagatacag gtatgaagct tcgtgtcaat gctaaaggta atatcttaaa
      661 aaatggtact agaggggata tgtatgttaa gatcatcgcc gctgaagatg atacttttat
      721 cagagatgat gatgatatat atatagaatt tccagtgttt tttactcaag ctatcttagg
      781 agagagtata aaagtaccca ccatacgcgg tgaagcgacc ttaaatttac caaagggtgc
      841 taaagatgga caaagatttg ttcttgaaaa agaaggggta aaagatgttc ataattctcg
      901 catgggaaat caaatcgttc aaatttctat caaattccca acttctttaa acgatgaaca
      961 aaaagaactt ttagaaaaac taagtgaaag ttttggcatc aaagatggta tgcatcaaga
     1021 gcaaaaaggg ctttttgaaa aaatcactaa ttggtttaag tcttaatttt cctaaagcgt
     1081 tttagcttgg gaaaattttt tatataaatt taagttttaa aaatcaggca taaaaaaagg
     1141 cggagcaaaa ctccgccttg aagttagact tgaaagcttc ttagaatttg taaagagctt
     1201 gaagtcttac agtgctatga tcagcacttt cattagtgtt tacaccttga tctaggttca
     1261 cataagaata gaatgctgag aagttaagtt ttggagagta tttgtaatct actcttgcaa
     1321 cagcttcaag ttttttacca ccacctaaat gatgattagt agcttctgtt tttgttccac
     1381 catatacgaa gtcagcacca acgcgaactg tttcgttgaa agtatatcca ccagttacat
     1441 aaccgaagat atttctacca gtatcaccat ttagtcttga accagtagta tagaaaattt
     1501 cctcacctgc aagtaaagaa ccaagattac cttgatcttc gattacaact gtagaagctt
     1561 tttctttatc accgtagtat aaaccaccaa ggctagcatc ccaaccattt acttcaatgc
     1621 taccttttaa agcaaataaa ttgccattag cgtgtctttt atcatcaagt tcgctatcaa
     1681 ggctatttcc taagtaagca ccttcaagtg tccagttgat tccatcaaag atagttgtac
     1741 tataagctgc atctacagca tagaagaatg ctacttgatc ccagtaagct aaccataatt
     1801 gtggattaaa ttgtccgcca gcaagatcat aagaacctac agcagcagca ccgtaaagat
     1861 ttcctaatga atctgcttga aaaggagctg tttcctgtgt tgtagatata gtactttttc
     1921 ctaataaatc tgcaccttgc tctttcgcca taaagctatc tacagcaaaa gcagctagag
     1981 ttaaaccatc gatgctgttg tttactactt tgatacctgt tcctactaaa ccatcaactc
     2041 cattgtcagt ccagatagtg tttagttgtt gtttaccagc gattacgctt gtagcaacat
     2101 cttcatttgt ataagttaag tataattgac gaacaaaaag tcctttttga tcatttttta
     2161 ttccattagc accataacca ccatcagcag cattatagtc aaattgaata aaagctttga
     2221 agttatcagc tatagcagca ctgaagttaa cttgtgctct atatttgtga ttttgtttgc
     2281 tgttgtttaa atttgagttg ttaacgaaat ttttatcaaa attacctgta tcgtatctgt
     2341 atcttaatac acctgataca tcaacatctt tgatcgcttc ttcaagtgga gtagcgttag
     2401 ctgctgaaaa agcacctgca gcaagagctg caactaaact aagtttaact agtttcatga
     2461 gaattctcct tgtcaaaaat taataaaaca tcgtaattgt agcacataaa tttggagttt
     2521 tttcttaaga agcacttaaa atagtaaaaa ttttaaatcc gaaggataaa aacatctaaa
     2581 gaaaagccta gctaaaggga tttaagctag gcgtgtaatt ttaaggagtt tttcttatga
     2641 atgtttttcg gttcgtttag aagtataagc ctaaaaagta aacgagaagt aatatatagt
     2701 tgttttaaat tattttgata aaaaaacaag taaattttta caagctaggg ataaaatttt
     2761 ataagtttca tcaaaattcc cactatacca aggatcagga acttcatcgt agtttagact
     2821 aggactaaaa tcagtgattt ttaaaacttt gttttgggtg ttggtgaagt tttttaaaac
     2881 atttttgaag ttagaattgt ccatggtgat taaaaaatcg ctttcatcgc aaagcttttg
     2941 agtgagtttt ttgcttgtga agtttttgtg ttctatgtta agttgagcaa gcttgttttt
     3001 ggtgccatag tgcatacctt ctccatcgtg ttctcctgaa gttccagcac tgtttataaa
     3061 aaattctttt tctaaatttg cttttttgac aagatctttc atgataaatt ctgccatagg
     3121 cgaacggcat atattgccta agcatataaa gagtattttt ttcattttta tccttgagtt
     3181 ttaattaaaa attataaaaa atatcataca ataaatccat ggaaaatttc aatagaactt
     3241 tgcttgtgtg ttggtttggt gtttttacca caagtatggg gcttagtcaa atcgctccga
     3301 ttttgccttt ttatatcaaa gaactaggac atgttgatac gagcgagata gcgttttatt
     3361 caggacttgc ttttgggatc actccgcttt ttatggctgt tttttcacct ttgtgggctt
     3421 ttttgggtgc aaagtatggt tataaaaata tgcttcttcg tgcaagtttt gggatgtccg
     3481 ttttaacctt atggcttagc tttgctcata gtgctttaga agtggttttt gtacggggtt
     3541 taacagggat aatttcaggt tttacttctg ctgctgttgt gtttatcgcc gtgatagcgc
     3601 ctaaagaaaa agtggcttat gctttaggaa ctctttctac ggcttctata agtggaagtt
     3661 tacttgggcc tttgtttggt ggctttgtgg ctgaattttt tagcattagt gcggtttttg
     3721 atgtggtggc ttttttgatc gcttgttctt ttgtgacgat ttattttttc atccatggga
     3781 gaaaaattca aaaagaggcg aagaaaaata ctcaaaaagt gaaagaaaac aaaaccctta
     3841 tcatcgttct ttttatcact acttttgtga tacaatttgg tacttttgga gtgatgccga
     3901 ttttaagtat ctatgttgag caaattcatc aaggtggaaa tttggctctt tgggcgggta
     3961 tagtggtggc tgcaagtggg attagcaatc tttttttcgc accaaaactt ggaaaaatcg
     4021 ccgataagat agggcctagt aagattattt ttggagcttt gatattttgt ggaatttgct
     4081 tttacttgca ggctgtagca agtaatgttt atacgcttat tttcgtgcgt ttacttatag
     4141 gtgtaggact tggagggctt ttgccttgtg tgaatgcctt gcttaaaaaa agtgtgagtg
     4201 ctaaaaattt aagtgtgatt tttggtttta atcaaacttg tcaatttttg ggaaattttt
     4261 gcggtgcttt tggcggaggg cttatggctt ctcattttag cgtggaattt gtttttactt
     4321 ttgtgtgttt gatttttatc attaatgctt ttattttctt ggcgtttgag aaaaaatata
     4381 tcttttcaaa tcaaggttta taaatttaga aaggtttaaa atggaaatga ttttatttgt
     4441 tttagtgatg attttacttg tgcttttgtt tgtagtgctt tttaggcagt ataaaagccc
     4501 taaaatagaa gaaaaaagca cgcaaagttt tagcgatatc atgcaactta aatccatagg
     4561 agaattaagt gtttttcaag tttttagtaa agagattgtc actaaaaaag atagcgcttt
     4621 taatggaatt tggaaaaatc ttttaggatg gtctttgagt gaaagacaga ttgctttgat
     4681 ttttgaattt gagatcactt tcttgtatga tttaagggat aaaaactttg atattttgcc
     4741 tttaggggac gatgcttata agatcatcat gccagagtgt agatacaaac acagcatcat
     4801 agatatgaaa ttttatgatg aaaaaaatgc taaattttta ccttttttac tgcctgattc
     4861 tatcaatagt acggggatta gttttagtga aagtgataaa aacaaactca taaaagaagc
     4921 caaagatgag gttaaagact tgtctttaaa tcttatccaa aatttagaaa gcaaaatcca
     4981 taaaagtgct aaggatactt tagaagctat tgctaaaggt tttggggcta agagagtgga
     5041 atttgaattt aaggataaca cacaaaagct agatgtaagt tagctttttt cttttcttgc
     5101 ttgggtaatg ctttttccac ctagtccgta attatccgta tcgatttcat cgataattac
     5161 cacagtcgag cttttatttt tgtttaaaac cttagcaagt aaatccgtta ctcctgcgat
     5221 aagctcttgt ttttgttctg ttgtaggttc tccgttttct ttggtgatgc gtatatttac
     5281 aaaaggcatt tttaactcct taaa
//
LOCUS       DAPIVO010000082         5299 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.083, whole genome shotgun sequence.
ACCESSION   DAPIVO010000082 DAPIVO010000000
VERSION     DAPIVO010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5299)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5299)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5299
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.083"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(189..1397)
                     /locus_tag="RJ239_001644"
     CDS             complement(189..1397)
                     /locus_tag="RJ239_001644"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HDV7331745.1"
                     /translation="MKISLFGYGKTTRAIAENLVDKFGPFDIYDDHFTETKKDTLGNL
                     LLNPNDFDDNLSDIEIPSPGFPPKHKLIQKAKNLQSEYDFFYDIMPKSVWISGTNGKT
                     TTTQMATHLLSHIGAVMGGNVGTPLAELNPYAKLWILETSSFTLHYTHKAKPEIYALL
                     PISPDHLSWHGSFDNYVQDKLSVLKRMNECDVVILPKIYANTPTKAHKISYEDEKDLA
                     VKFGIDTEKISFKSPFLLDAIMALAIEKILLDTLSYKLLNSFVMEKNKLEELKDSQNR
                     LWVNDTKATNESAVMAALSRYKDKKIHLIIGGDDKGVDLSNLFDFMKGFDIELYAIGI
                     STEKMLDYAKKANLKAYKCEVLSKAVNEISNHLRVNEVALLSPACASLDQFNSYAERG
                     KVFKECVNKI"
     gene            complement(1397..2458)
                     /locus_tag="RJ239_001645"
     CDS             complement(1397..2458)
                     /locus_tag="RJ239_001645"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HDV7331746.1"
                     /translation="MYYLSDLSHYAFFTYISVRAGFAFFIALCLSLFLMPKFITWAKA
                     KNASQPIYEYAPETHKTKCHTPTMGGLIFISSAVIASLFCIKFDNIFAISALLCLILF
                     CLIGLIDDLGKVLKKDNHSGLSPRMKLLAQIIAGLICILPLYFSSELSTELFIPFYKH
                     PLFDMEIFAIAFWILVLISSSNAVNLTDGLDGLATVPGIFSLSTLGIFLYLSGNLNYS
                     EYLLLPKIQGLGEVVIICAALIGALMGFLWYNCYPAQVFMGDSGSLALGGFIGFLAVI
                     SKNEILLLLIGFVFVLETVSVILQVGSFKIFNKRVFKMAPIHHHFEKVGWVENKIIVR
                     FWMIALLSNLLALASIKLR"
     gene            2538..4016
                     /locus_tag="RJ239_001646"
     CDS             2538..4016
                     /locus_tag="RJ239_001646"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HDV7331747.1"
                     /translation="MKQKCVLIITDGIGYNKNSKFNAFEAAKKPSYEKLFKEVPNSLL
                     KTSGLAVGLPEGQMGNSEVGHMCIGSGRIIYQNLVRINKAIENKELEKNENLKKLLAK
                     CKRVHIIGLYSDGGVHSMDTHFKAMLEICAKNGNEVFAHAITDGRDVSPKSGLNFIKD
                     LKEFCENLGVHFATLCGRFYAMDRDKRWDRVKEYYECLLGKAYKVPNLLEYLQKSYDE
                     NVTDEFIKAAQNENYKGMREEDGIIFINFRNDRMKQLVEVLNSKDFKEFEREKIFENL
                     LTMSVYDDKFKLPVLFEKEKIENTLAQVISKAGLSQLHTAETEKYAHVTFFFNGGKEE
                     LLENETRVLIPSPKVKTYDEKPQMSAFEVCDAVKKGIEKGEDFIVVNFANGDMVGHTG
                     DFNATIKAVEAVDTCLGEILECAKKHDYAFIITSDHGNCEAMQDEKGNLLTNHTTFDV
                     FVFVQARGVSKIKDNMGLSNIAASVLKILDLEIPKEMNEALF"
     gene            4088..4831
                     /gene="fabG"
                     /locus_tag="RJ239_001647"
     CDS             4088..4831
                     /gene="fabG"
                     /locus_tag="RJ239_001647"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HDV7331748.1"
                     /translation="MKFSGKNVLITGASKGIGASIAKTLAGFGLKVWINYRSKPELAD
                     ALKDEIIASGGVAAVIKFDASKEDEFENGVKTIVESDGELSYLVNNAGVTNDKLALRM
                     KLEDFSGVVDTNLSSAFLGCREALKTMSKKRFGAVVNIASIVGEMGNAGQVNYSASKG
                     GMIAMTKSFAKEGASRNLRFNCVTPGFIKSDMTEVLSNEIKQTYQDNIPLKRFAEPEE
                     VANCVAFLLSDYASYVTGDVLKINGGLYM"
     gene            4838..5248
                     /locus_tag="RJ239_001648"
     CDS             4838..5248
                     /locus_tag="RJ239_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HDV7331749.1"
                     /translation="MMDLKEIAQFLDDNAPAFLATLGTCGNPRVRPIQSPLLVGDKIY
                     FCTANTKGLFKHIKNYNDIEFCSCAKDGTFLRLRANAVFEPNLEVKKMMFKKYPYLVN
                     LYETPQNPKFEVFYLDHLSARMQFMNGEFKLFKA"
BASE COUNT         1892 a          718 c          953 g         1736 t
ORIGIN      
        1 tgtcttcatt acttacttta tatataaatc ctatgtttat ttttattgtt gttttagatg
       61 atacttagaa tcgtgtttaa aaaagagttt gctgctggtt agggttttta gagagaatag
      121 ggtgttttta ggggtttgaa aatactagaa ggataaaatt taaaattttc tatgaaaagt
      181 aaaataaatt aaattttatt cacacattct ttaaagactt ttccacgctc tgcgtaagag
      241 ttgaactgat ctaaacttgc acaagcggga cttaaaagag ctacttcatt gactcttaag
      301 tgatttgaaa tttcatttac agctttagat aaaacttcgc atttataggc tttcaaattc
      361 gctttttttg cataatcaag cattttttcg gtactaatac ctatagcata gagttctata
      421 tcaaatcctt tcataaaatc aaataaattg ctaagatcta cacccttatc atctccccct
      481 atgataagat ggattttttt atctttatag cgactaagtg cagccattac agcactttca
      541 tttgtagctt tagtgtcatt tacccaaagc ctattttgac tgtctttaag ctcttcgagt
      601 ttattttttt ccattacaaa gctatttaaa agcttatagc ttaaagtatc aagtaaaatt
      661 ttttctatag ctaaagccat gatagcatcg agtaaaaaag gacttttaaa ggaaattttt
      721 tccgtatcaa tgccaaattt aacagctaga tctttttcat cttcatagct tattttatga
      781 gcttttgttg gagtatttgc ataaatttta ggcagtatta ctacatcaca ttcattcatt
      841 ctttttaaaa cgcttagctt atcttgaaca taattatcaa aacttccatg ccaagaaaga
      901 tgatcaggac ttataggtaa aagtgcataa atttcaggtt tagctttatg agtgtagtgt
      961 agggtaaaag atgaagtttc aagtatccaa agttttgcat aaggattaag ctctgctaaa
     1021 ggagttccaa catttccacc cataacagca ccaatgtgtg ataataaatg tgtagccatt
     1081 tgtgtggtgg tggttttgcc attggttccg cttatccaaa cggattttgg catgatatca
     1141 taaaaaaagt catattcgct ttgtaaattt tttgcttttt gaatgagttt gtgctttggt
     1201 ggaaaacctg gactaggaat ttcaatatcg cttaaattat catcaaaatc attaggattt
     1261 aaaagtaaat ttcctagtgt atcttttttt gtttctgtaa aatgatcatc ataaatatca
     1321 aaaggtccaa atttatctac taaattttca gcaatagcac gtgtggtttt tccgtatcca
     1381 aaaagtgaaa ttttcattat cttagcttta ttgatgcaag tgcaagcaaa tttgaaagta
     1441 aggctatcat ccaaaaacgc actataattt tattttccac ccagccaact ttttcaaaat
     1501 gatgatgaat aggcgccatt ttaaatactc ttttattaaa aattttaaaa cttccaactt
     1561 gtaaaattac agaaacagtt tcaagaacaa aaacaaaacc tatgagtaaa agtaaaattt
     1621 catttttgct aataacggct aaaaatccta taaagccacc taaagctaaa cttccactat
     1681 ctcccataaa aacttgtgca ggataacagt tgtaccataa aaatcccatt aaagcaccaa
     1741 ttagcgctgc acaaataatc actacttcac caagtccttg aatttttggc aaaagtagat
     1801 attcactata atttaaattt ccactcaaat ataagaatat ccctaaagta gataaagaaa
     1861 aaatgcctgg aactgtagct aagccatcaa gtccatcggt taaatttaca gcattagagc
     1921 tagaaattaa aaccaaaatc caaaaagcaa tggcaaaaat ttccatatca aaaagagggt
     1981 gtttataaaa aggtataaaa agttccgtgc taagctctga actaaaatat aaaggtaaga
     2041 tgcagataag tccagcgatg atttgtgcta aaagcttcat tcttggacta agtcctgaat
     2101 gattatcttt ttttagaact ttgcctaaat catctatgag tcctatcaaa caaaaaagta
     2161 tcaaacaaag taaagcactt atagcaaaaa tattatcaaa tttgatacaa aataaacttg
     2221 cgattactgc agaactgatg aaaataagcc cacccatggt tggagtatgg catttggttt
     2281 tatgagtttc tggggcgtat tcgtaaatag gttgactagc atttttagct tttgcccaag
     2341 taataaattt aggcattaaa aataaagaca aacataaagc gataaaaaat gcaaatcctg
     2401 cacgcacact aatataagta aaaaaagcat aatgacttaa atctgaaaga taatacaaaa
     2461 cctagccttc tttttggttt ttaaaagttt aattttagta aaatctaacc aaaaaaattc
     2521 ttataaaaga gagaaaaatg aagcaaaaat gcgttttaat tattacagat ggaatagggt
     2581 ataataagaa tagtaagttt aatgcttttg aagcagctaa aaaaccaagt tatgaaaagc
     2641 tttttaagga agtcccaaat tctttactaa aaacgagtgg tttagctgta ggtttgccag
     2701 aagggcagat gggaaatagt gaagtagggc atatgtgtat aggaagtggg cgtattattt
     2761 atcaaaattt agtgcgtatt aataaagcca ttgaaaacaa agaacttgaa aaaaatgaga
     2821 atttaaaaaa acttttagca aaatgtaaaa gagtgcatat tatagggctt tatagtgatg
     2881 gcggggtaca ttctatggat acgcatttta aagccatgct tgaaatttgt gcgaaaaatg
     2941 gcaatgaagt ttttgctcac gcaatcactg atgggcgtga tgtaagtcca aaaagtggct
     3001 taaatttcat aaaagattta aaagaatttt gtgaaaactt aggcgtgcat tttgctacgc
     3061 tttgtgggcg tttttatgct atggatagag ataagcgttg ggatagggta aaagagtatt
     3121 atgagtgctt gttaggtaag gcttataaag tgccaaattt attagaatac ctacaaaaat
     3181 cttacgatga aaatgttact gatgagttta tcaaagcagc tcaaaatgag aattacaagg
     3241 gcatgagaga agaagatggc attatcttta tcaactttag aaatgataga atgaaacaac
     3301 ttgttgaagt gttaaattct aaggatttta aagagtttga acgcgaaaaa atctttgaaa
     3361 atttacttac tatgagtgtt tatgatgata aatttaaact ccctgtgctt tttgaaaaag
     3421 aaaaaattga aaatacttta gcgcaagtga tttctaaagc agggcttagt cagcttcata
     3481 ccgcagaaac cgaaaaatac gcccatgtaa ctttcttttt taatggcgga aaagaagagc
     3541 ttttagaaaa tgaaacaagg gttttaatcc caagccccaa ggtaaaaact tatgatgaaa
     3601 aaccccaaat gagtgctttt gaagtgtgtg atgcagtgaa aaaaggcata gaaaagggtg
     3661 aggattttat agtggtaaat tttgcaaatg gagatatggt tggacataca ggtgatttta
     3721 atgctactat aaaggctgtt gaagcggtgg atacttgttt aggcgagatt ttagaatgtg
     3781 caaaaaagca tgattatgct tttatcatta caagtgatca tggaaattgc gaggctatgc
     3841 aagatgaaaa aggaaatttg cttaccaatc acaccacttt tgatgttttt gtttttgtgc
     3901 aagcaagggg agtttcaaag attaaagata atatggggct gagtaatata gctgcaagcg
     3961 tgcttaaaat tttagactta gaaattccaa aagaaatgaa tgaggcttta ttttagtttg
     4021 tttgcctttt ttataagaaa tttgttaaga ttgcaatttt taaaattaaa cttattaagg
     4081 atagataatg aaatttagtg gaaaaaatgt tttaattact ggagcaagta agggaatagg
     4141 tgcttctatc gcaaaaactt tggcaggttt tgggcttaaa gtttggatca attatcgttc
     4201 aaaacctgaa cttgcagatg ctttaaaaga tgaaattatt gcaagtggtg gtgttgctgc
     4261 tgtgattaaa tttgatgcaa gcaaagaaga tgagtttgaa aacggcgtaa aaactatagt
     4321 tgagagtgat ggagagttaa gttatcttgt aaataacgca ggcgttacaa atgataaact
     4381 tgctttaaga atgaaattag aggactttag tggcgttgtg gatacgaatt taagctcagc
     4441 ttttttaggt tgtagagaag ctttaaaaac catgagtaaa aaacgctttg gtgctgttgt
     4501 aaatatcgct tctattgtcg gagaaatggg caatgctggg caagtaaatt attctgctag
     4561 taagggtgga atgatagcta tgactaaatc ttttgctaaa gaaggagcaa gtagaaattt
     4621 acgctttaat tgcgtaactc caggttttat aaaaagcgat atgactgaag ttttaagcaa
     4681 tgaaatcaaa caaacctatc aagataatat ccctttaaaa cgctttgcag agcctgaaga
     4741 agtagctaat tgtgtagcgt ttttacttag tgattatgcc tcttatgtga caggcgatgt
     4801 gcttaagatc aatggtggtt tatatatgta aggaaaaatg atggatttaa aagaaatagc
     4861 acaattttta gatgataatg caccagcatt tttagccact ttaggaactt gtggaaatcc
     4921 tagagtgcgt cctatacaaa gtccattgct tgtgggagat aaaatttatt tttgcacagc
     4981 aaatacaaaa ggacttttta agcatataaa aaattataat gatattgaat tttgttcttg
     5041 tgcaaaagat gggacttttt taagacttag agctaatgcg gtttttgaac caaatttaga
     5101 agttaaaaaa atgatgttta aaaaatatcc ttatcttgta aatctttatg aaactccgca
     5161 aaatccaaaa tttgaagttt tttatcttga tcatttaagc gctagaatgc aatttatgaa
     5221 tggagaattt aagcttttta aggcttaatg atttgataat tttattaact atatattaat
     5281 taagataaat attatctta
//
LOCUS       DAPIVO010000083         5121 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.084, whole genome shotgun sequence.
ACCESSION   DAPIVO010000083 DAPIVO010000000
VERSION     DAPIVO010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5121)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5121)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5121
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.084"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            67..1062
                     /locus_tag="RJ239_001649"
     CDS             67..1062
                     /locus_tag="RJ239_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDV7331750.1"
                     /translation="MKKILSLSVASLALCGALNAADLKIAGSSTVYPFTSFVAEEYAS
                     IKNTKTPIVESLGTGGGFKVFCEGTTDISNASRPMKLSEFETCKKAGVTDIVGIMIGY
                     DGIVLAQNKTNAPLNITKKELFLALAKEIPQNGKLIPNPYTNWNQINKNLPNRKISVY
                     GPPSSSGTRDTIEELVMSDVSKKIPEYKGEYKTIRQDGAYIPSGENDNLIVSKLTIDK
                     DAFGIFGYSFLVSNSDKINAANIDGVTPSEESIADEKYELARSLFIYINAKKNPKEAF
                     EFAKIYMSDDLAKSGGELEKIGLVPLSDDKLKASQKHVEDRKILNDELVKAGKVF"
     gene            1072..1986
                     /gene="pstC"
                     /locus_tag="RJ239_001650"
     CDS             1072..1986
                     /gene="pstC"
                     /locus_tag="RJ239_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HDV7331751.1"
                     /translation="MLKEKIIKFALFLCAFVSVIVSFAIMLTILIEALKFFQKESVVT
                     FLFSSQWAADAAFMNADGTSKQGVFGALSLFWGTFYISLIAMLTALPLGVMCAIYLGV
                     FAGKKSKNYLKPILEIIAGIPTVVFGFFAAIVVAPFIVWFFSLFGIQASFQSALGAGF
                     IMGIMIVPIVASLSQDCIEAVSEKRINGAYALGMTKKEVVFAVILPEAIPGIVAACLL
                     GLSRALGETMIVVMAASLRPNLTLNFLEDMTTVTVKIVEALSGDQAFDSSLALSAFSL
                     GLVLFVITLIINMFSVYLINRFHKRKNL"
     gene            1983..3071
                     /gene="pstA"
                     /locus_tag="RJ239_001651"
     CDS             1983..3071
                     /gene="pstA"
                     /locus_tag="RJ239_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012857620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HDV7331752.1"
                     /translation="MKKLFKKRQKASKSFKRLCKMGLYINLIFLCIFLGSVAYLGFPA
                     FKQTYIFVEANRNSPAYDLLSRAEQRKIRTGQIAEKSWLLANSEVDQYMKQKYNRLSE
                     KQRTLVDDLVQKGEIELKFNSNFFLNGDSKSPENSGILSSVIGTLLVMLVCMVVSVPI
                     GVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFINLFGMPRSSALVG
                     GLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIMLPLAMPMILTGS
                     ILTLAGAIGETAPLMIIGMIAFIPDVASSIFDPTSVLPAQIYSWSAMPERAFLERTAA
                     GIIVLLGLLVVLNLSAILLRKYFQGKLK"
     gene            3068..3808
                     /locus_tag="RJ239_001652"
     CDS             3068..3808
                     /locus_tag="RJ239_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HDV7331753.1"
                     /translation="MIAKTTNLNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTF
                     LRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFVKSIYENISYA
                     PKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARALAIK
                     PKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGE
                     LIEFGESKEFFENPKQEKTKAYLSGAFG"
     gene            3869..5121
                     /locus_tag="RJ239_001653"
                     /pseudo
     CDS             3869..5121
                     /locus_tag="RJ239_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856911.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
BASE COUNT         1769 a          648 c          966 g         1738 t
ORIGIN      
        1 aatgtttcca aaatgtttcc aagttttttt aaacttccat tactttttta aagttaagga
       61 gaaaaaatga aaaaaattct atctttaagt gtggcaagtc ttgcactttg tggtgcttta
      121 aatgcagcag atttaaaaat cgcaggttca tcgactgtgt atccttttac ttcttttgta
      181 gctgaagaat atgcttcgat taaaaataca aaaactccta tagtagagag cttgggaaca
      241 gggggtggat ttaaggtatt ttgtgaagga actactgata tttctaatgc ttcaagacct
      301 atgaaattaa gcgaatttga aacttgcaaa aaagcagggg taactgatat agtagggatt
      361 atgataggtt atgatggtat agttttagct caaaataaaa ccaatgctcc attaaatatc
      421 acaaaaaaag aacttttctt agcattagca aaagaaattc cacaaaatgg aaaacttata
      481 ccaaatcctt atacaaactg gaatcaaatc aataaaaatt taccaaatcg taaaattagt
      541 gtttatggtc caccatcaag ttcaggaaca agagatacta tagaagagct tgtaatgagt
      601 gatgtgtcta aaaaaattcc tgagtataaa ggcgagtata aaaccatacg ccaagatggt
      661 gcttatatcc caagtggcga aaatgacaat ctaatcgttt caaaacttac tattgataaa
      721 gatgcttttg gaatttttgg ttatagcttt ttggtgagca attcagacaa aatcaatgct
      781 gctaatatcg atggtgttac gccaagcgaa gaaagcatcg cagatgaaaa atacgaactt
      841 gcaagaagtt tgtttattta tatcaatgct aagaaaaatc caaaagaagc ctttgaattt
      901 gcaaaaattt atatgagtga tgatttggca aaaagtggtg gagagcttga aaaaatagga
      961 cttgttcctt taagtgatga taaattaaaa gcttctcaaa aacatgtaga agatagaaaa
     1021 attttaaatg atgagcttgt aaaagctgga aaagtttttt aaggaaaaac tttgctaaaa
     1081 gaaaaaataa tcaaatttgc acttttttta tgtgcttttg taagcgtgat agtaagcttt
     1141 gctatcatgc ttacaatttt aattgaagct ttaaaattct ttcaaaaaga aagtgttgtt
     1201 acctttttat tctcaagtca gtgggcagct gatgcagctt ttatgaatgc agatggcacg
     1261 agcaaacaag gtgtttttgg agcgctatcg cttttttggg gaacttttta tatttcattg
     1321 attgctatgc taacggcttt acctttaggg gttatgtgtg ctatatattt aggtgttttt
     1381 gctggcaaaa aatctaaaaa ttacttaaaa cctattttag aaatcattgc agggattcct
     1441 actgttgttt ttggattttt tgcggctata gttgtagcgc cttttatagt gtggtttttt
     1501 tctttatttg gcatacaagc aagctttcaa agtgctttag gcgcaggttt tatcatgggg
     1561 atcatgatag tacctatagt ggcttcgtta tctcaagatt gcattgaagc agtaagcgag
     1621 aaaaggatta atggcgctta tgctttaggt atgacaaaaa aagaagtggt ttttgccgtg
     1681 attttacctg aggctattcc tggtatagtt gcagcttgtc ttttaggact ttcaagagcc
     1741 ttaggcgaaa ctatgatagt ggtgatggca gcttctttgc gtccaaattt aactttaaat
     1801 tttttagaag atatgacaac ggtaacggta aaaatcgtag aagctttaag tggagatcaa
     1861 gcttttgata gttctttggc tttaagtgct ttttctttag gtttggtgct ttttgtcatc
     1921 actttaatca tcaatatgtt tagcgtttat cttatcaatc gctttcataa aaggaaaaat
     1981 ttatgaaaaa actttttaaa aaaagacaaa aagcttcaaa gtcttttaaa agactttgta
     2041 aaatggggct ttatattaat ttaatttttc tttgtatctt tttaggaagt gtggcttatc
     2101 ttggatttcc tgcttttaag caaacctata tttttgtaga ggctaataga aattctcctg
     2161 cttatgatct tttatctcgc gcagaacaaa gaaaaataag aacaggacaa atcgctgaaa
     2221 aatcttggct tttggcaaat tcagaagtag atcaatatat gaagcaaaaa tataatcgcc
     2281 ttagtgaaaa acaaagaact ttagtcgatg atcttgtgca aaaaggcgag atagagctta
     2341 aatttaatag caatttcttt ttaaatgggg actcaaaatc tcctgaaaat tcaggaattt
     2401 tatcttcagt tatagggact ttgcttgtta tgcttgtttg tatggttgtg agtgttccta
     2461 taggcgttgc agcggcaatt tacttagaag aatttgcacc acaaaatatc cttacacatt
     2521 ttatagaagt gtgtattaac aaccttgcaa gtattcctag tatcttgttt ggacttttag
     2581 gacttggagt gtttatcaat ctttttggaa tgcctcgttc aagtgcttta gtgggtgggc
     2641 ttactttggc gatcatgagt ttgcctatta tcattgtttc aaccaaagcg gccttaaaaa
     2701 gtgtggatat caatatgaaa aatgctgctt atgccttagg tatgacaaag gttcaaatgg
     2761 taaaaggtat tatgttacct ttggctatgc ctatgatttt aacaggttct attttgactt
     2821 tagcaggggc tataggcgag actgcacctt tgatgattat cggtatgata gcctttatcc
     2881 ctgatgtagc tagttcgatt tttgatccaa ctagcgtttt acctgctcaa atttactcat
     2941 ggtctgctat gccagagcgt gcatttttag aaagaacagc agcgggtatt attgtgcttt
     3001 taggactttt agttgtgtta aatcttagtg caatattatt aagaaaatat tttcaaggaa
     3061 aattaaagtg atagcaaaaa caacaaattt aaatttattt tatggaaaaa aacaagcttt
     3121 atttgatatc aatatgcaaa tagagcaaaa caaaattact gcactcatcg gtgcttcagg
     3181 atgtggtaaa tccacttttt tgcgttgttt taatagaatg aatgataaaa ttgcaaaaat
     3241 cgatggttta gtggaaattg aaggaaaaga tgttaaaaat caagatgtag tagccttgcg
     3301 taaaaatgta ggcatggttt ttcaacaacc caatgttttt gtaaaaagca tttatgaaaa
     3361 catctcttat gcaccaaaac ttcatggtat gattaaaaac aaagatgaag aagaagcttt
     3421 ggtggtggat tgcttgcaaa aagtggggct ttttgaagag gttaaagata aattaaagca
     3481 aaatgcccta gctctttcag gcggacaaca acaacgcctt tgtatcgcaa gagctttagc
     3541 gatcaaaccg aaacttttgc ttttagatga gccaacttct gcacttgatc ctataagttc
     3601 aggcgtgatt gaagagcttt taaaagaatt aagccataat ctttctatga tcatggttac
     3661 gcataatatg caacaaggca aacgcgtagc tgattataca gcattttttc atcttggaga
     3721 gcttatagaa tttggtgaaa gtaaagaatt ttttgaaaat ccaaaacaag aaaaaaccaa
     3781 ggcttattta agcggtgctt ttggataaga tttatttttt ggaaatttga tgatataatt
     3841 aattaaaaat ttcaaaaaaa ggtttaatat gattataaac caaatttatt ctatagattc
     3901 ttgtgatgat gtagaattaa atatcaaaag gggaagtaaa ttagaattta gattgactta
     3961 tgatgatagt aaagaaatag aagctattgt ttgtattata tccgggttag gtggagatat
     4021 agatgataat ttatatatag aagagtattg tgcaagaaac tataatgtgg ctgttttaag
     4081 tgtaaattat cattgtatag gtaatcgtcc tcaaactgga gcgtcatttt atattaatga
     4141 acttgataga ttgattttaa agacaagctt agaagcaatt ggaatacaac ttcctgtaga
     4201 tatgcaaaat ttaaaaacat acgatgaatt ttattgtgta gtggattttg ttaataaatt
     4261 tatagagaaa ttaaaaaaag aaaaagaatt gagtgaagat tattgtctgt atttaagcgt
     4321 aggtcttgaa ccaactaaaa atgaatatca aaattatggt attatgcagg caatggatat
     4381 tataaatgct attttatata taaatatcaa ccttcctttt aaagtttcta atatgtcgac
     4441 cgtgagtagg atgggggggg ggtataaaga ctatattaat aggtgtttcg catggaggat
     4501 atttagccaa tttatgtgca aaaatctctc cttggaatat tgatgttgtt ttagataatt
     4561 cttctaatgt gactttggat aatgatttat ggagatttat aggctttgga agggagatag
     4621 attatgtaaa gtattgtagt gtaggtatta catatatgtt taagaatatt aaactagcag
     4681 cttttgataa aacttattgg actacgaata aacaatctcc atattatttt tcaaatgcaa
     4741 gaaaaatagt aagagaacca ttgaataaag aacatttaaa aattcaaagt ttatatccaa
     4801 aaccaaaata tatcgcttat cattctaaat ttgatcagta tgttttacta gaaaaaagag
     4861 aaaattattt taatatttta agagaattgg ggtttgaggt tgattttatc aaaataactg
     4921 atgaaaaaga aatagatgga aaatttatta aaaatttaga acatggttgt ggtataccta
     4981 tgaaactact tattaaaaaa cacttattgc aaatcttaaa agaacctttg caagataaaa
     5041 tttgcaagaa ggaagtctca tataaatgtg atgagctagt gtatactttc aaagaagaaa
     5101 atcatcaaat tattttaaat a
//
LOCUS       DAPIVO010000084         5058 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.085, whole genome shotgun sequence.
ACCESSION   DAPIVO010000084 DAPIVO010000000
VERSION     DAPIVO010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5058
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.085"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(93..602)
                     /locus_tag="RJ239_001654"
     CDS             complement(93..602)
                     /locus_tag="RJ239_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2393 family protein"
                     /protein_id="HDV7331754.1"
                     /translation="MHFTIFHIIAFIILLICFALICILIFLKVKQKEMALISYTIATI
                     FTALLIYSIFLTINQFTTQADLSKLTYTRDLRHESVIVSGKVQNLTKFKIKKCYLILS
                     ILNQQQVGGEIFNDKNIRNAKMQNTSVSYTIEIIDTLPGNTYKEFRASVPFPPTFNNP
                     EFYHTLKCI"
     gene            complement(602..1132)
                     /locus_tag="RJ239_001655"
     CDS             complement(602..1132)
                     /locus_tag="RJ239_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2393 domain-containing protein"
                     /protein_id="HDV7331755.1"
                     /translation="MEKLREIVLFYTTHLYLVDYMLILLVFFLFTCVLLLCVFLRHRP
                     IAALFIIAFDIIICFLVYIYGYKLIDNEVRTRKIAITDQKMIQSSNDLIVDFNITNNS
                     KNNFKECKITAKIFADKIPNDNIIEEYKKKFIPFRQKSREIKDLKKNATQVQRIAFEN
                     FNYENNYTIRLVSECF"
     gene            complement(1144..2232)
                     /locus_tag="RJ239_001656"
     CDS             complement(1144..2232)
                     /locus_tag="RJ239_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prohibitin family protein"
                     /protein_id="HDV7331756.1"
                     /translation="MPADLNDYFNKKNGNSNNNGNNNRQNFNFKAPEFNFKGFGKFSP
                     FVYGVIIIILFLIVAKPFMVINSGEMGIKSTTGKYDPNPLEPGLHFFLPFVQKITIID
                     TRVRQINYASIEGSNENLSSGSGVINKNSISVLDSRGLPVSIDVTVQYRLNPLQVPQT
                     IATWSLNWENKIIDPVVRDVVRSVVGKYTAEELPTNRNTIATQIEEGIRKTIEAQPNE
                     PVELRAVQLREIILPSKVKEQIERVQIAKQEAERTKYEVERANQEALKKAALAEGEAN
                     ATIISAKGKAMAVKIEADAQAYSNKEIANSLNTPLLNLKQIETQKEFNEALKVNQDAK
                     IFLTPGGAVPNIWVDTKDAKKQSAANMN"
     gene            complement(2245..3159)
                     /gene="ilvE"
                     /locus_tag="RJ239_001657"
     CDS             complement(2245..3159)
                     /gene="ilvE"
                     /locus_tag="RJ239_001657"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HDV7331757.1"
                     /translation="MISADKIWMDGKLVDFKDATLHFLTHSLHYGNAVFEGTRAYKTD
                     KGLAIFRLEDHTKRLLESAKITLLNCPFSQKELENAQIELLKANNFKSNVYIRPLIFL
                     GDGVMGLYHIKAPVRVGIAAWEWGAYLGEEGLEKGIKVKISSFARNSVKSCMGKAKAS
                     ANYLNSQIAKFEAIEAGYEEALMLDEEGFIAEGTGECFFIVKDGVLITPPNDFSLKSI
                     TQDTVLKIAHDLGITVLRQRISRDEVYTADEAFFTGTAAEITPINNIDARIIGNGLRG
                     SVTKKLQDAYFDVVYGRNEKYASMLTYI"
     gene            3336..3542
                     /locus_tag="RJ239_001658"
     CDS             3336..3542
                     /locus_tag="RJ239_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HDV7331758.1"
                     /translation="MPLVNIKLAKPSLSKEQKAELIADITELLSTKYNKSKERVVVVL
                     EDVENYDIGFGGESVEAIKAKASK"
     gene            3539..3994
                     /gene="bcp"
                     /locus_tag="RJ239_001659"
     CDS             3539..3994
                     /gene="bcp"
                     /locus_tag="RJ239_001659"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HDV7331759.1"
                     /translation="MSLNIGDKAPQFELLNQDGVKIALKDFIGKKVILYFYPKDNTPG
                     CTTEACDFSANYDKFGGKNAVIIGISPDSVASHEKFISKFDLKHILLSDSEKEVAKAY
                     GALGLKKNYGKEYEGLIRSTFVIDETGKIAQIYSNVRVKDHALKVLESL"
     gene            3994..>5058
                     /locus_tag="RJ239_001660"
     CDS             3994..>5058
                     /locus_tag="RJ239_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HDV7331760.1"
                     /translation="MLVHICCSVDSHYFIEELRKTYPDEKIIGYFYDPNIHPLSEYEL
                     RFLDVKRSCDKLGIKLYKGEYEYEKWLNAVRGYEDEPEKGARCEICFDVRMGSSVKFA
                     AKIGEKKLTTTLLTSPKKDLEQLKNALQKECEPYGVEFLAPDFRKNGGTQRQFALAKK
                     EMLYHQNYCGCIYGLKKQKQDKNFIDELMSSVNKQILPVSIEARIALYKKVVLWEKKG
                     IKFEILREKFLNYRLLSALIKLDKKPVKSHILFYSHFKNAYTRFSLDEENLKQNLKEG
                     FYRSTKDEIVLVEFWRFNAFFKNKWKNFEDFLKKPLSVQAEIKWRNKLFGTYNLSPII
                     ILENILPSRYEVIAKSEIYHD"
BASE COUNT         1716 a          686 c          823 g         1833 t
ORIGIN      
        1 ttattaatat ttatataatt tatagcggaa ttattgtttt gttatgtgaa taattaatgt
       61 attttagaat ttttgctagt tgatttcttg aatcaaatac attttaaggt gtgataaaat
      121 tcaggattat taaaagttgg aggaaaagga acgctagctc taaattcttt ataggtatta
      181 cccgggagtg tgtctatgat ttctatagta taagaaacac ttgtattttg cattttagcg
      241 ttacggatat ttttatcatt gaaaatttca cctcctactt gttgttggtt taatatgcta
      301 agtatcaaat agcatttttt gattttaaat ttagtaagat tttgaacttt tccacttact
      361 ataacgcttt catgtcttag atctcttgtg taggttagtt tgctaagatc ggcttgagtg
      421 gtgaattgat tgattgttag aaaaatagaa tatatcaaaa gtgcggtaaa aatagtagct
      481 atggtataag aaatcaaagc catttctttc tgtttgactt ttagaaagat taaaatacaa
      541 atcaaggcaa agcaaataag taaaatgata aaagctataa tatgaaaaat cgtaaaatgc
      601 attaaaaaca ctccgaaact aagcgtatgg tatagttatt ttcatagtta aaattttcaa
      661 aagcaattct ttgaacttgg gttgcgtttt tctttagatc tttaatttct ctactttttt
      721 gtctaaaagg gataaatttc tttttatatt cttctatgat attatcatta ggtattttat
      781 ctgcaaaaat tttagctgta attttacatt ctttaaaatt attttttgaa ttatttgtaa
      841 tgttaaaatc aacaattaaa tcatttgagc tttgtatcat tttttgatct gtaatagcga
      901 tttttcgagt tcttacttca ttgtctatta gtttataccc atagatataa actaaaaaac
      961 aaataataat atcaaatgca ataataaaaa gtgctgctat aggtctatgg cgtaaaaata
     1021 cacaaagaag taaaacacaa gtgaagagaa aaaaaactaa taaaatcagc atataatcta
     1081 ctaaatataa atgagtagtg taaaaaagca cgatttctct tagtttctcc acttgtgtat
     1141 cctttagttc atgttggcag cactttgctt tttagcatct ttggtatcaa cccaaatgtt
     1201 tggcactgct ccacctggag ttaagaaaat tttagcatct tgattgactt ttaaagcttc
     1261 attaaattct ttttgagttt caatttgttt taaatttagc aaaggggtgt ttaggctgtt
     1321 tgcgatttct ttgttagaat aagcttgtgc atctgcttct attttaacag ccatagcttt
     1381 acctttggcg ctgattatgg ttgcatttgc ttccccttca gctaaagcag ctttttttaa
     1441 ggcttcttga ttagctcttt ctacttcata tttagttctt tcagcctctt gttttgcaat
     1501 ttgcacgcgt tcgatttgtt cttttacttt tgaaggtaaa ataatttctc taagttgtac
     1561 agcgcgaagt tctacaggtt catttggttg ggcttctatg gtttttctta taccttcttc
     1621 tatttgagtg gctattgtat tacgattagt aggaagttct tcggctgtgt attttcctac
     1681 aacacttcgc actacatcac gaacaactgg atcgataatt ttattttccc aatttaagct
     1741 ccaagtagct atagtttgag gaacttgcaa aggatttaag cggtattgta ctgtaacatc
     1801 aatagataca ggcaatccac gagagtcaag tacagaaata ctatttttat taataacacc
     1861 tgaacctgaa gataaatttt cattacttcc ctctatagaa gcatagttga tttgtcttac
     1921 tctagtatcg attatggtta ttttttgtac aaaaggtaag aaaaagtgaa gtcctggttc
     1981 taatggattt gggtcatatt tacctgttgt tgatttaatc cccatttccc cagaatttat
     2041 caccataaaa ggttttgcaa cgattaaaaa taagataata ataatcaccc cataaacaaa
     2101 tggagagaat tttccaaaac ctttaaaatt aaattctggt gctttgaaat tgaaattttg
     2161 acggttgttg tttccgttat tgttagaatt tccatttttt ttattgaaat aatcattcaa
     2221 atcagctggc atttatttcc ttttttaaat ataagttagc atagatgcgt atttttcatt
     2281 gcgtccataa actacatcaa aataagcatc ttgaagtttt ttagttacag atcctcttaa
     2341 accatttcct attattcttg catcaatatt attaataggt gtgatttcag cggctgttcc
     2401 ggtaaaaaat gcttcatcag cagtataaac ttcatctctt gaaattcttt ggcgaagcac
     2461 agtaatacca agatcatgag cgattttaag cactgtatct tgagtaatgc tttttaaaga
     2521 aaaatcattt ggaggtgtga ttaaaacccc atcttttaca ataaagaaac attctcctgt
     2581 tccttctgcg ataaaacctt cttcatcaag catcaaagct tcttcatagc ctgcttcaat
     2641 agcttcaaat tttgcaattt gagagttaag ataattcgca cttgctttag cttttcccat
     2701 gcatgattta acactatttc ttgcaaaaga cgaaattttt acttttatac ctttttctaa
     2761 accttcttct ccaaggtaag caccccattc ccaagctgca atcccaactc ttacaggagc
     2821 ttttatatga taaagtccca taactccatc gcctaagaaa atcaaagggc ggatatagac
     2881 attgctttta aaattgtttg cttttaagag ttcaatttgt gcattttcaa gctctttttg
     2941 agaaaaagga caatttaaaa gagtaatttt tgcagactct aaaagtcttt tggtgtgatc
     3001 ttcaagtctg aaaattgcta agcctttatc tgttttatag gctctagttc cttcaaaaac
     3061 agcattgcca taatgcaaag aatgggttaa aaagtgcaaa gttgcatctt taaaatcaac
     3121 taattttcca tccatccaaa ttttatctgc tgagatcatt tttttacctt ttatagttgt
     3181 ttatttctta aaaaatatta ttttaagaat aaatcgggat tttatcaaaa atatactaat
     3241 aataagcttt tattaaatta agcttttttg ttaaaaaaaa tattaggtat tttttgaaat
     3301 aattatgaaa aattatcgtt aaaaaaggag aaattatgcc attagtaaat atcaaattag
     3361 caaagccgtc tttaagcaag gagcaaaaag cggaacttat agctgatatt accgaacttt
     3421 taagcacgaa atataataaa agtaaagaaa gagttgttgt ggttttagaa gatgtggaaa
     3481 attatgacat aggctttggc ggagaaagtg tagaagctat caaagcaaag gcaagtaaat
     3541 gagtttaaat ataggagata aggcacctca atttgagctt ttaaatcaag atggggtaaa
     3601 aatagcatta aaagatttta ttggcaaaaa ggtgattttg tatttttatc caaaagataa
     3661 taccccaggt tgcactacag aagcttgtga ttttagtgca aattatgata aatttggtgg
     3721 taaaaatgcg gtgattattg gtatcagtcc tgatagcgtg gcaagtcatg aaaaatttat
     3781 ctctaaattt gatttaaaac atattttact tagcgatagt gaaaaagaag ttgctaaagc
     3841 ttatggagct ttggggctta agaaaaatta cggaaaagaa tacgaaggtc ttattcgttc
     3901 tacttttgtt atcgatgaaa caggtaagat tgctcaaatt tatagtaatg ttcgtgtaaa
     3961 agatcatgct ttaaaagtgc ttgaaagtct ttaatgctag tacatatttg ttgtagcgtg
     4021 gatagtcatt attttattga agaacttaga aagacttatc ctgatgaaaa aattatagga
     4081 tacttttatg atccaaatat ccatccttta agcgaatacg aactaagatt tttagatgta
     4141 aaaagatctt gtgataaact tggtattaag ctttataaag gtgagtatga gtatgaaaaa
     4201 tggcttaatg ctgtgcgtgg ttatgaagat gagcctgaaa agggtgcaag gtgtgaaatt
     4261 tgctttgatg taagaatggg atctagtgtt aaatttgctg ctaaaatagg agaaaaaaag
     4321 cttactacta cgcttttaac cagccctaaa aaagatttag aacagttaaa aaatgcttta
     4381 caaaaagaat gtgagcctta tggagtagag tttttagctc ctgattttcg taaaaatggc
     4441 ggcactcaaa gacagtttgc tttagcaaaa aaggaaatgc tttatcatca aaactattgc
     4501 ggctgcattt atgggcttaa aaaacaaaaa caagataaga attttattga tgaattaatg
     4561 tcttctgtaa ataagcaaat tttacctgta agtatagaag caagaatagc tctttataaa
     4621 aaagtagttt tatgggaaaa aaaaggtata aaatttgaaa ttttaagaga gaaattttta
     4681 aattatcgtc ttttaagtgc tttgataaaa ttagataaaa agcccgttaa atctcatatt
     4741 ttattttatt cgcattttaa aaacgcttat acaagatttt ctttggatga ggaaaattta
     4801 aaacaaaatt taaaagaagg cttttataga agtactaaag atgaaatagt tttagtggaa
     4861 ttttggcgtt ttaatgcatt ttttaaaaac aaatggaaaa attttgaaga ttttttaaaa
     4921 aaacctttaa gtgttcaagc agaaattaaa tggcgtaata aattgtttgg aacttataat
     4981 cttagtccta ttatcatcct tgaaaatatt ttaccttcaa gatatgaagt gatagcaaaa
     5041 agtgaaattt atcatgat
//
LOCUS       DAPIVO010000085         4865 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.086, whole genome shotgun sequence.
ACCESSION   DAPIVO010000085 DAPIVO010000000
VERSION     DAPIVO010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4865)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4865)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4865
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.086"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(29..787)
                     /gene="map"
                     /locus_tag="RJ239_001661"
     CDS             complement(29..787)
                     /gene="map"
                     /locus_tag="RJ239_001661"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HDV7331761.1"
                     /translation="MIELKKPDEIEKLRIANQIVAKTLNFLENEIKIGMSLKQIDKMA
                     EDYILSLGAKPSFKGLYGFPGAICTSLNQVCIHGIPDDKIIKEGDILGLDVGSLIDGY
                     YGDAARTIAIGEVSPADKALISCAKDALYHAIDIIRDGMRFKELSAALGEFIHVRGFV
                     PLRGYCGHGIGRKPHGEPEILNYLEKGASAKSGPKIKNGMVFCIEPMICQKDGTPKHY
                     NGKWDAGSIDGLNAAHYEHCVAVINGRAEILSMI"
     gene            complement(789..1541)
                     /locus_tag="RJ239_001662"
     CDS             complement(789..1541)
                     /locus_tag="RJ239_001662"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HDV7331762.1"
                     /translation="MKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDK
                     DTIIKFCLEALDFFEQFQIDMLIIACNTASAYALDALRAKAHFPVYGVIDAGVEATIK
                     ALHDKNKEILVIATKATIKSEEYQKRLLSQGYTNINALATGLFVPMVEEGIFEGDFLQ
                     SAMEYYFKNITTPDALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLKERENID
                     LKNHKAKLHFYASSDVESLKNTAKIWLNLLRK"
     gene            complement(1543..2001)
                     /locus_tag="RJ239_001663"
     CDS             complement(1543..2001)
                     /locus_tag="RJ239_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDV7331763.1"
                     /translation="MRHIFFIITIIFFISGCSFYQNLNYRPSYNTNKEARLKVIANEW
                     KKTPYVLGGTSKKGADCSGFTQSALAQLNIRIPRTTKTQLGSGRKVSKSKLQTGDLVF
                     FKTGRGPNGMHVGIYMSKGKFIHLSTKDGVKEVELNSSYWKARYIGARRY"
     gene            complement(2010..3179)
                     /gene="nhaA"
                     /locus_tag="RJ239_001664"
     CDS             complement(2010..3179)
                     /gene="nhaA"
                     /locus_tag="RJ239_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HDV7331764.1"
                     /translation="MNNIVHKLKTLVLNEAFGGVLLIVCTLLALLVQNGSFSEHYREF
                     LNLKVGFSVGEFELNKPFLLWINDGLISIFFFAIGLELKKEFLHGDFKNPKNIVLPFM
                     AALGGILIPAMLFALVNIGDAYTLKGWAIPTATDTAFALAILMMCGKHIPSSLKIFLL
                     SLAIFDDVGAILIIAIFYTTKLSIAAFVIAGLAILVMLILNLLGITRKSFYFICSVIL
                     WISVLKSGVHATLAGIVTAFFIPMQTKNGEAFLEEIYESLKFWIAFIILPLFAFANAG
                     VNLSNIDIGAIFSGVSIGIFLGLFVGKQVGVFLFSYLAIRFKFAALPQGSNLKQLYGV
                     CILTGIGFTMSLFIDGLAYEVSDIFNYADNLAILIASFCSGIWGFIYLKFFTTRS"
     gene            complement(3176..4324)
                     /gene="nhaA"
                     /locus_tag="RJ239_001665"
     CDS             complement(3176..4324)
                     /gene="nhaA"
                     /locus_tag="RJ239_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HDV7331765.1"
                     /translation="MQMIKKMVLSETFPGILLIFFTFLALLCKNSSLSVIYTDFFHAN
                     FTVGFDHFQISKSLDLWINDGLIAIFFLCIGLELKYEILRGQLKNIRAVSLPIFGALG
                     GMITPALIFIAINYSHDFAMKGWAIPTATDIAFAVGILMLLGNKIPTSLKLFLLSLAI
                     FDDLGAIVIIALFYTDQLSALAIIICLFCIFALLLLNYYHITHLSLYVLVGVVLWIAM
                     LKSGVHATLAGVIISLFIPLDTKNKKPYLHEVLKDLNPWVVYFILPLFAFANAGIDIR
                     DMHLGSVFSPVSLGIILGLFLGKQLGVFTFCFIAIKLKLAKLPENIKYGKFYGICILT
                     GIGFTMSLFIDGLAYKNSDIFEYADKLAILVASFLSAIVGFIYLKIVK"
     gene            complement(4467..4649)
                     /locus_tag="RJ239_001666"
     CDS             complement(4467..4649)
                     /locus_tag="RJ239_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjfB family protein"
                     /protein_id="HDV7331766.1"
                     /translation="MVSDVSMGNVNLMTAVNTSVLKKSMDTNEALMNELIEGMEGVSQ
                     ASAPQASSSSGLDIYA"
BASE COUNT         1843 a          913 c          590 g         1519 t
ORIGIN      
        1 aaaaaaatat tatttttata atttaatatc atatcataga aagaatttca gcacgcccat
       61 taatcacggc aacacaatgt tcataatgag ccgcattcag cccatcaata cttccagcat
      121 cccattttcc attataatgc tttggtgttc catctttttg gcatatcata ggctctatgc
      181 aaaacaccat tccattttta attttagggc cactttttgc actcgcacct ttttctaaat
      241 agtttaaaat ttcaggctct ccatggggct ttcgtcctat accatgcccg caatatccac
      301 gaagcgggac aaaacctctt acatggataa attcgcctaa agcagctgaa agttccttaa
      361 aacgcattcc atcacgaata atatctatag catgatataa cgcgtcttta gcacaagaga
      421 ttaaagcttt atcagcgggt gaaacttctc ctatagcaat agttcttgct gcatccccat
      481 aatacccatc aatcaaactt cccacatcaa gacctaaaat atcaccctct ttgataattt
      541 tatcatctgg aattccatgg atacaaactt gatttaaaga tgtgcaaatg gcacctggaa
      601 aaccataaag tcccttaaat gatggcttgg cgccaaggct taaaatataa tcttctgcca
      661 ttttatcgat ttgttttaag ctcattccta ttttaatttc attctctaaa aaatttaaag
      721 tttttgctac aatttgattt gctattctta atttttctat ttcatctggt tttttcaatt
      781 ctatcatttt atttccttaa taaatttagc caaattttag cagtattttt taaagattca
      841 acatcgcttg aagcataaaa atgtaatttt gctttatgat ttttcaaatc tatattttct
      901 ctttctttaa gaaattcaac tatagcatct cctgaatgaa ttaattttgt tttatcacca
      961 aaatacttac ttaaagaacg tcctagtaaa gggaaatgag tgcaagcgag tatcaaagca
     1021 tctggagttg tgatattttt aaaataatat tccatagcac tttgcaaaaa atctccttca
     1081 aaaatacctt cttcaaccat aggcacaaaa agccctgtag ctaaagcatt tatatttgta
     1141 tatccttgag ataacaaacg cttttgatat tcttctgatt taatggttgc ttttgtcgca
     1201 atgactaaaa tttctttatt tttatcatgc aaagctttta tcgttgcttc aacccctgca
     1261 tcaattacgc catatactgg aaaatgtgct tttgctctta aagcatctaa agcataagca
     1321 ctagcagtat tacatgcaat gataagcata tcaatttgaa attgttcaaa aaaatccaat
     1381 gcttcaagac agaactttat aatagtatct ttatctttca ctccataagg aactcttgcg
     1441 gtatctccat aatagataat ttcatcaaaa agcctagctt catagagaga ttttaaaaca
     1501 ctaagccctc ctactccgct atcaaataca cctattttca ctttaatacc ttcttgctcc
     1561 tatataacga gccttccaat aagaactatt tagctcgact tcttttactc catctttagt
     1621 agataaatgt ataaattttc ccttgctcat ataaatacca acatgcatac catttggccc
     1681 tctacctgtc ttaaaaaata ccaaatctcc tgtttgcaat tttgatttag aaacttttct
     1741 tccagaacct aattgagttt ttgtagtgcg aggtatgcgt atattaagct gagctaatgc
     1801 gctctgtgta aatcctgaac aatcagcacc ttttttacta gttccaccta aaacataagg
     1861 ggtttttttc cattcatttg caataacctt gagccttgct tctttatttg tgttgtaact
     1921 aggacgatag tttagattct gataaaaact acatccactt ataaaaaata taatcgtgat
     1981 gatgaaaaaa atatgcctca tcaatcccct taagatcgag tagtaaagaa tttaagataa
     2041 ataaaacccc aaatcccaga acaaaatgag gctatgagaa tagctaagtt atctgcataa
     2101 ttaaaaatat cactaacttc atacgccaat ccatcaataa acaaactcat tgtaaaacca
     2161 attcctgtaa gtatgcaaac cccataaagt tgtttcaaat ttgaaccttg gggcaaagct
     2221 gcaaatttaa agcggattgc caaataagaa aataaaaata cacccacttg tttacccaca
     2281 aaaagcccta agaaaatacc tatacttaca cctgaaaaaa ttgctcctat atcgatattg
     2341 gataaattta ctccagcgtt agcaaaagca aataaaggta aaataataaa agcaatccaa
     2401 aattttaagc tttcataaat ttcttctaaa aatgcttccc catttttagt ttgcatcggt
     2461 ataaaaaatg ctgttacaat tccagctaaa gttgcatgta ctccactttt taaaacacta
     2521 atccaaagaa taactgagca aataaaataa aaagactttc ttgttatccc taaaagattt
     2581 aaaataagca ttaccaaaat agcaagtcct gcaattacaa aagcagctat tgataatttt
     2641 gtcgtataaa aaatagctat aattaaaata gcacccacat catcaaaaat agccaaagaa
     2701 agtaagaaaa tttttaaact tgatggaatg tgcttgccgc acatcattaa aatcgctaag
     2761 gcaaacgctg tatctgtagc tgtaggtatt gcccaacctt ttaaagtata agcatctcct
     2821 atattcacca aagcaaacaa cattgctggt ataagtatac cccctaacgc agccataaaa
     2881 ggcaaaacaa tatttttagg atttttaaaa tctccgtgca aaaattcctt cttaagctca
     2941 agccctatag caaagaaaaa tatagatata agcccatcat ttatccaaag taaaaaaggc
     3001 ttgttaagct caaattcacc tacactaaat ccgactttta aatttagaaa ttctcgataa
     3061 tgttcgctaa aagacccgtt ttgcacaagc aaagcaagca aagtgcaaac tataagtaaa
     3121 acgccgccaa aagcctcatt taaaactaaa gtttttaatt tatgtactat attattcatt
     3181 taacaatctt aagataaata aaaccaacaa tggcacttaa aaaactagct actaaaatag
     3241 caagtttatc cgcatattca aaaatatcac tatttttata agccaaacca tcaataaaca
     3301 agctcatcgt aaaaccgatg cctgttaaaa tacatatacc ataaaatttt ccatatttaa
     3361 tattttcagg taattttgca agtttaagtt tgatagcaat aaaacaaaaa gtgaaaacac
     3421 ctaattgttt tcctaaaaat agtcctaaaa taatcccaag acttacagga gaaaatactg
     3481 aaccaagatg catatctcta atatcaattc cagcattggc aaaagcaaat aaaggtaaaa
     3541 taaaataaac tacccaagga tttaaatcct taagaacttc atgtaaataa ggttttttat
     3601 tttttgtatc aagaggtata aacaaagaaa tgatcacacc agccaaagtt gcatgcactc
     3661 cacttttaag catagctatc cacaacacaa cacctaccaa cacgtacaaa gaaagatggg
     3721 tgatgtgata ataatttaac aaaagcagag caaatataca aaacaaacaa ataataattg
     3781 ctaaagctga aagctgatct gtataaaaca aagcaataat aacaatagca cccaaatcat
     3841 caaaaatagc taaagagagt aaaaaaagtt ttaaacttgt aggaatttta tttcccaaaa
     3901 gcattaaaat acccactgca aaagctatat cagttgctgt aggtattgcc caacctttca
     3961 tagcaaaatc atgagaataa ttaatagcaa taaaaattaa agccggagta atcatacccc
     4021 ctaaagctcc aaatataggt aaagatacag ctcttatatt tttaagttgc ccacgtaaaa
     4081 tttcatattt taactcaagc cctatacata gaaaaaatat agctatcaaa ccatcattta
     4141 tccataaatc caacgatttt gaaatttgaa aatgatcaaa tcctactgta aaattagcat
     4201 gaaaaaaatc tgtataaata acacttaaag aagaattttt acataataaa gctaaaaatg
     4261 taaaaaatat aagcaaaata ccagggaaag tttcacttaa aaccatcttc tttatcattt
     4321 gcatccttgc tcctaagtaa atatttgtaa aaatttaata cgataaataa aatggtaaaa
     4381 ttataacgaa aaaatactaa agaaataatt atttaaaaaa acaagcccaa gataccaaaa
     4441 agttcttaag cttgttctta agatatttaa gcgtaaatat ccaaaccact agagctagaa
     4501 gcttgtggag cggaggcttg agagacacct tccatacctt cgatgagttc attcatcaat
     4561 gcctcgtttg tgtccataga ttttttcaaa actgaagtat taacagcagt cattaaatta
     4621 acattaccca tagaaacatc tgaaaccata catcctcctt ttagattgag tcttaagact
     4681 ttatttaaat tcggatgata tttttaaaac ttaatatttt ttactaaact ttttaaaatt
     4741 tttcaaggga accaatatct gaaattaaaa atcataaatt ttttaagata aaatcctatt
     4801 ttaaaaattt ttacactatg aaacaataag caaaatataa atgattgatg cttttaaaag
     4861 cgaat
//
LOCUS       DAPIVO010000086         4782 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.087, whole genome shotgun sequence.
ACCESSION   DAPIVO010000086 DAPIVO010000000
VERSION     DAPIVO010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4782)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4782)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4782
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.087"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..526
                     /locus_tag="RJ239_001667"
     CDS             <1..526
                     /locus_tag="RJ239_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HDV7331767.1"
                     /translation="IFASTHKDEEELLLDHFKLEENEKLIIAPRHPERFKEVENLLLN
                     KGLEFEKFSSLKDENKKFSKKILLLDALGELVNFYAISDVVVLGGSFIEGIGGHNPIE
                     AAYFDNVLISGKFIHNQKVLFEEVENVYFCEKLKDLNDKVHYLNLKAKISKKENLDLI
                     IQTIQKGIDARKSL"
     gene            507..1259
                     /locus_tag="RJ239_001668"
     CDS             507..1259
                     /locus_tag="RJ239_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDV7331768.1"
                     /translation="MQEKAYKLLALQEKISNREAKDLIDKGCVFSYGKKVVVARALMS
                     DKARFNVIKAKNPQIIFEDDKIIAINKPYAYVSEDLEKKFNAKLLNRLDKETSGVILL
                     CKDEDFRKLCIEEFKKHRVYKSYIAVLDGVLAEEVEVNEPIFTIKVKGGALSKVSKDG
                     LSALSIITPIMMQSKKTLAKIVIQTGRTHQIRVHAKFIKHGVVGDEKYAKISSDRMYL
                     HSYEIKIFNYHFRANLDSGFAKFGFDIKNLDF"
     gene            1327..2664
                     /gene="ffh"
                     /locus_tag="RJ239_001669"
     CDS             1327..2664
                     /gene="ffh"
                     /locus_tag="RJ239_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HDV7331769.1"
                     /translation="MFELVSESFKSAINKLRFVDDEKALKNALETLKKALLKADVHHK
                     VTKELLTLIEEDAKQNGIGQKQFLNAIKINLENILSVNGKNQGFVFASKPPTVVLMAG
                     LQGGGKTTSTIKLANYLKLRNKKVLVAACDLQRLAAVEQLRQLCEANEIELFFIENEK
                     DPIRVAKEALKKAESSMVDVLLVDTAGRLAIDEALMDELRAVKDVLNPDEIFYVADAM
                     SGQDGVKTAASFNEVLGISGVILSKFDADTKGGVALGIAKQIGIPLRFIGVGEKVADL
                     EVFIPDRIVSRIMGEGDLATLAEKTAAIIDEKEAKKLNQKIKKGEFNFNDFLNQMESI
                     KKLGSMKSLIGMIPGLGGMANAVKDIDLDNSKEIIRIKAMISSMTPKERENPDLLNNA
                     RKRRIAEGAGLSQVEVNRFLKQFSNAAKLAKRFSGKKGMESLTQMMSQARRQF"
     gene            2729..2956
                     /gene="rpsP"
                     /locus_tag="RJ239_001670"
     CDS             2729..2956
                     /gene="rpsP"
                     /locus_tag="RJ239_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HDV7331770.1"
                     /translation="MTVIRLTRMGRTKRPFYRIVVTDSRKRRDGGWIESIGYYNPMVE
                     PEVIKVDAERLAYWKSVGAKLSDKVASITSK"
     gene            2959..3201
                     /locus_tag="RJ239_001671"
     CDS             2959..3201
                     /locus_tag="RJ239_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HDV7331771.1"
                     /translation="MVENFLREYAKLIADYPEQIDTQKIELSENFFEIVLFAHKVDTG
                     KLIGKNGKMINAIKTVISAYKSKDASSYRVTVKALE"
     gene            3194..3733
                     /gene="rimM"
                     /locus_tag="RJ239_001672"
     CDS             3194..3733
                     /gene="rimM"
                     /locus_tag="RJ239_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA processing protein RimM"
                     /protein_id="HDV7331772.1"
                     /translation="MSEKDFVQVAKLGKTVGLKGYVKLHNLSDFSSQFKKDATFFIKN
                     TKEMLKIKHYNANNSTVLFENYEDIEKAKELTNLILFQSIEKSRQTCKLKKDEFFYFD
                     ILECEVFEEDKRLGKVVDILETGASYLFEIQSDEKWVEKKYPKIFFIPYLDKFVKNID
                     IEKRQIFCTQDAFLILENS"
     gene            3730..4434
                     /gene="trmD"
                     /locus_tag="RJ239_001673"
     CDS             3730..4434
                     /gene="trmD"
                     /locus_tag="RJ239_001673"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HDV7331773.1"
                     /translation="MKFSFVSLFPNLMEFYFQDSILARAKEKKLFKLNFYNPRDFSKN
                     SYHKVDDYKIGGGAGLLMQAEPMYEVLRSIQEKKENPYFIFLNPSGKTFNQKDAKRLS
                     KKEHIVFVCGRYEGIDERVLEIFANEVFSIGDFILTGGELPALVMCDAILRNVNGVLG
                     NMESLEEESFENNLLEAPAFSKPFIFEKKNKKFYTPSEFLKGNHARIASLKTTLASCK
                     TKFFRPDLFLEHERKK"
     gene            4445..>4782
                     /gene="rplS"
                     /locus_tag="RJ239_001674"
     CDS             4445..>4782
                     /gene="rplS"
                     /locus_tag="RJ239_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HDV7331774.1"
                     /translation="MKNKYIEQFEAKQIEGKNVPDFRAGDTLKLAIRIKEGDKTRIQN
                     FEGICIARRGNGVSETFIVRKIGANNVGVERIFPIYSESLESITVLRRGRVRRARLFY
                     LRDRRGKAAR"
BASE COUNT         1774 a          519 c          929 g         1560 t
ORIGIN      
        1 catttttgcc agtacgcata aagatgaaga agagcttttg cttgatcatt ttaaactaga
       61 agaaaatgaa aaactcatta tcgccccacg acaccctgaa cgttttaaag aagttgaaaa
      121 tttgctttta aacaaaggtt tagaatttga aaaatttagt tctttaaaag atgaaaataa
      181 gaaattttct aaaaaaattt tgcttttaga tgctttaggg gagcttgtaa atttttatgc
      241 aatttctgat gttgttgtgc ttggaggttc tttcatagaa ggcataggag gacacaatcc
      301 tatagaagcg gcatattttg acaatgtatt aatcagtggg aaatttattc acaatcaaaa
      361 ggttttgttt gaagaagtgg aaaatgtata tttttgtgaa aaattaaagg atttaaatga
      421 taaagttcat tatttaaatt taaaagctaa aatttccaaa aaagaaaatt tagatcttat
      481 catacaaact atacaaaagg gaattgatgc aagaaaaagc ttataaactc ttagctttgc
      541 aagaaaaaat ttcaaatcgt gaagctaaag atttgattga taagggttgt gttttttcat
      601 atggaaaaaa agttgtggtt gctagagctt tgatgagcga taaggcaaga tttaatgtga
      661 taaaagctaa aaatcctcaa attatttttg aagatgataa gattattgct attaataaac
      721 cttatgctta tgtgagtgaa gatttagaga aaaaatttaa tgccaagctt ttaaatcgtt
      781 tagacaaaga aacaagtggt gtgattttgc tttgtaaaga tgaagatttt agaaagcttt
      841 gtatagaaga atttaaaaaa cacagggttt ataaaagtta tattgcggtt ttagatgggg
      901 ttttggctga agaggttgaa gtgaatgaac ctatttttac tataaaagta aaaggcgggg
      961 cgttaagtaa agtttcaaaa gatggtttaa gtgccttaag tatcattact cctatcatga
     1021 tgcagtcaaa aaaaacctta gcaaaaatag ttattcaaac aggtagaact catcaaatca
     1081 gagtgcatgc taaatttata aaacatggcg ttgtaggtga tgaaaaatat gctaaaattt
     1141 caagcgatag aatgtatttg catagctatg aaattaaaat ttttaattat cattttaggg
     1201 ctaatttaga tagtggtttt gcaaaatttg gctttgatat aaaaaattta gatttttaaa
     1261 gccatttaag aaaaaatttt gtataatgca aggtttaatt taaaaatttt atagaaaggt
     1321 gataaagtgt ttgagttagt cagcgaatct tttaaatcag cgattaataa attacgtttt
     1381 gttgatgatg aaaaagcact taagaacgct ttagaaacct taaaaaaagc tcttttaaaa
     1441 gcagatgttc accataaggt aactaaagag cttttgactt tgatagaaga agatgcaaag
     1501 caaaacggaa taggtcaaaa acaattttta aatgccatta aaataaattt agaaaatatt
     1561 ttaagtgtca atggcaaaaa tcaaggtttt gtttttgctt ctaaaccccc aacagtagtt
     1621 ctaatggcag gtttgcaagg gggcggtaag actacaagca ctatcaaact tgcaaattat
     1681 ttaaaattac gcaataaaaa agttttagtt gcagcttgtg atttacagcg tttagcggca
     1741 gtggagcagc taagacaact ttgtgaagct aatgaaattg aacttttctt catagaaaat
     1801 gaaaaagatc ctattagggt tgctaaagag gctttaaaaa aggctgaaag ttctatggtg
     1861 gatgttttgc ttgtggatac tgctggacgt ttggctatag atgaagcttt gatggatgag
     1921 ttaagagcag ttaaggatgt cttaaatcct gatgagattt tttatgttgc tgatgcaatg
     1981 agtggtcaag atggggttaa gactgctgct agttttaatg aagttttagg tatcagtggg
     2041 gtaattttat caaaatttga tgcagatact aaaggtggag tagccttagg tatagcaaaa
     2101 caaatcggta ttcctttaag atttattggt gtgggtgaaa aagtagcaga tttagaagtt
     2161 tttataccag atcgtatagt aagtcgtatt atgggtgagg gtgatttggc aactttagct
     2221 gaaaaaactg ctgcgattat tgatgaaaaa gaggctaaaa aactcaatca aaaaattaaa
     2281 aaaggtgaat ttaattttaa tgattttctt aaccaaatgg aaagtattaa aaaattagga
     2341 agtatgaagt ctttaatcgg tatgatacca ggacttggtg gaatggcaaa tgcggtaaaa
     2401 gatatagatt tggataattc taaagaaatc atacgcatta aagcaatgat ttcttcaatg
     2461 actccaaaag aaagagaaaa tcctgattta ttaaataatg ctagaaagcg tcgtatagca
     2521 gagggagcag gtctttctca ggtagaagtc aatcgttttt taaaacaatt tagcaatgca
     2581 gcaaaacttg caaaaagatt ttcaggtaaa aaaggaatgg agagtttgac acaaatgatg
     2641 agtcaagcta gaagacagtt ttaaatttta tttataaata ctttttatag tatctataaa
     2701 taaaattttt aatttttaag gagtgtaaat gacagttatt agacttacaa gaatgggtag
     2761 aaccaaaaga ccattttatc gtattgtagt tacggacagt agaaaacgtc gtgatggtgg
     2821 ttggatagaa agtattgggt attataatcc tatggtagaa cctgaagtaa ttaaagttga
     2881 tgcagagcgt ttagcttatt ggaaaagcgt tggtgcaaaa cttagcgata aagttgcttc
     2941 tatcactagc aaataatcat ggtagagaat tttcttagag aatacgcaaa attaattgca
     3001 gattatcctg aacagattga tactcaaaaa attgaattaa gtgaaaattt ttttgagatt
     3061 gttctttttg cacataaggt tgatacaggt aagcttatag gtaaaaatgg aaaaatgatc
     3121 aatgctataa aaaccgtaat ctctgcttat aagagcaagg atgcaagttc ttatagagta
     3181 acggtaaaag cacttgagtg aaaaagattt tgttcaagtt gcaaaacttg gtaaaactgt
     3241 gggtcttaag ggttatgtaa aattgcataa cctgagcgac ttttcttctc aatttaaaaa
     3301 agatgctact ttttttataa aaaacaccaa agaaatgtta aagattaagc attataatgc
     3361 aaacaattct actgttttat ttgaaaatta tgaagatata gaaaaggcca aagaattaac
     3421 taatcttatt ctttttcaga gtatcgagaa aagcagacaa acttgtaaat taaaaaaaga
     3481 tgagtttttt tattttgata ttttagagtg tgaagttttt gaagaagata aaagattagg
     3541 taaagtggtt gatatcttgg aaactggagc ttcttattta tttgaaattc aaagtgatga
     3601 aaaatgggtt gaaaaaaaat atcctaaaat attttttatt ccatatttgg ataaatttgt
     3661 taaaaatata gatatagaaa aacgacagat tttttgcacg caagatgctt ttttaatttt
     3721 agaaaattca tgaaatttag tttcgtttct ttgttcccta atcttatgga attttacttt
     3781 caagattcta tacttgcaag agcaaaagaa aaaaaacttt tcaaacttaa tttttataat
     3841 ccaagagatt tttctaaaaa ttcttatcat aaagtcgatg attataaaat aggtggtgga
     3901 gctggacttt tgatgcaagc tgaacctatg tatgaggtgc taagaagtat tcaagaaaaa
     3961 aaagaaaatc cctattttat ttttttaaat ccaagtggta aaacctttaa tcaaaaagac
     4021 gccaaacgct taagtaaaaa agaacatata gtttttgtat gtgggcgcta tgaaggtata
     4081 gatgaaagag tgcttgaaat ttttgcgaat gaagttttta gtatagggga ttttatttta
     4141 actggaggag aattacctgc gcttgtaatg tgtgatgcaa ttttaagaaa tgttaacggg
     4201 gttttaggaa atatggaaag tttggaagaa gaaagctttg aaaataattt actcgaagcg
     4261 cctgcttttt caaaaccttt tatttttgag aaaaaaaata aaaaatttta tactccttca
     4321 gagtttttaa agggtaatca cgctagaatt gcaagtttaa aaactacttt ggcgtcttgc
     4381 aaaacgaaat tttttcgtcc agatttattt ttagagcatg aacgcaaaaa ataagggatt
     4441 ttttatgaaa aataaatata tagaacaatt tgaagcaaaa caaattgaag gtaaaaatgt
     4501 tccagatttt cgtgctggtg atactttaaa gcttgcaatt cgcatcaaag aaggagataa
     4561 aacaagaatc caaaattttg agggtatttg tattgctaga agaggtaatg gcgtaagtga
     4621 aacttttatc gtgcgtaaaa ttggcgctaa taatgttggc gttgagagaa tttttcctat
     4681 ttatagtgaa agtttagaaa gtattactgt tttgcgtcgt ggtcgtgtac gccgtgcaag
     4741 attattctac ttaagagata gacgcggtaa agcagcgcgt at
//
LOCUS       DAPIVO010000087         4531 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.088, whole genome shotgun sequence.
ACCESSION   DAPIVO010000087 DAPIVO010000000
VERSION     DAPIVO010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4531)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4531)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4531
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.088"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            118..1100
                     /locus_tag="RJ239_001675"
                     /pseudo
     CDS             118..1100
                     /locus_tag="RJ239_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002881065.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
     gene            complement(1135..1776)
                     /locus_tag="RJ239_001676"
     CDS             complement(1135..1776)
                     /locus_tag="RJ239_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HDV7331775.1"
                     /translation="MRNFFCKFVLALVFYSSFALANNSFITLNPSLPSSENSVIEAFS
                     YKCIHCYNHHKFGTLEKLREAFPNLHFKLYPVSLMNGEFSKEMNELFTFAQYKDEQNG
                     KDASYSDSLSHKLADVYFVSYFLNKQRNFSNLDEFYDIGLKAMNVNKNEVLNFLNTPK
                     AKEILSEFQRANDIAKTYGTPAFVVNGKYQINPSAINSMQDLEDLVKKLSNMK"
     gene            complement(1860..3296)
                     /locus_tag="RJ239_001677"
                     /pseudo
     CDS             complement(1860..3296)
                     /locus_tag="RJ239_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004315485.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
     gene            complement(3332..4132)
                     /gene="dsbI"
                     /locus_tag="RJ239_001678"
     CDS             complement(3332..4132)
                     /gene="dsbI"
                     /locus_tag="RJ239_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide oxidoreductase DsbI"
                     /protein_id="HDV7331776.1"
                     /translation="MSCIKMKDKCRNFSLSKWQDTRKPWLILIIVTIGLTCIAHFLFQ
                     EYLFMKPCEQCVYIRFDMLVMAIGGMIALINPANNIIKIFSYSLAFYGIWLGLEHCLT
                     LNHIHEVVHSENPFAGVDGCREIPIYPFNLPLYKWASSWFLPTGECGMDTPVVPENAY
                     NHLNAFQKFFIGTPPDFENGLYSNGWYLIPSLKFMNMAICCLIAFLCCFVVLFAMFIA
                     YVLDKNKPNAKIFALVIVALVLVLKFIGESKNPNQNIASLNQVVLRYS"
     gene            complement(4129..4488)
                     /locus_tag="RJ239_001679"
     CDS             complement(4129..4488)
                     /locus_tag="RJ239_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide isomerase"
                     /protein_id="HDV7331777.1"
                     /translation="MKFPVKLARSIVVCAFLAGISASALSEGKEYVILKNPIANADNY
                     SVGLKAMNVSKADFENFLKTPEAAELLKSYEIANPISQNYGTPAFVVNGKYQIVPSAI
                     NSPEALIEITKELSKQK"
BASE COUNT         1577 a          772 c          659 g         1523 t
ORIGIN      
        1 atattatttt aaggtttaaa gcttttttct taaaatgtaa ttaggtttta ttgacttttt
       61 ctaaataaag tcttatactg aatttaaatt acgcaaaata aggaggaaaa ttgatgaata
      121 aatttttcta tagttttaac tttgttgtta tatggaagtt gtgctttagc cttagatcca
      181 aatttggaaa aaaccaagag tgcaacaggt attgacctgc ctactgctaa atggaatttg
      241 cctaaggcat taaatgaaga tggcactata gatgaaacta agatgccaaa aaattcagaa
      301 tatagcaaaa tggttatttt aggaaataaa attcttaatg aaacaagcaa atatgtgggt
      361 ccacaggcca aagatcctaa aaaaagattt gcgggaaata atctttcttg ttcaagctgt
      421 catgctaatg gtggaagtgt gcaaaatcaa tcgggttttg taggaatttg ggcaagattt
      481 ccacaatata atgccagagg agataaagta attaccttag cagataggat caatggctgt
      541 tttgaacgct ctatgaatgg caaaagaatg cctagtgatg cgcctgaaat gaaagccatg
      601 ctaacttata tgcaatggtt atctcaagga gttccagtag gagctaagat agaagggtag
      661 ggacttaaga aaatagattt catctcaaga gcagctgatc ctaaaaaagg caaggcaatt
      721 tatatggata aatgtgccgt ttgtcatcaa gaaaatggat taaggcttaa aaatgaggat
      781 agcacagggg cgtattatct ttatccacca ctttggggtg atgatagtta taatacagga
      841 gctggaatgt atcgtctatc aaagctgctt cttatattaa agaaaatatg cctcaaggtg
      901 cgcctgactt aagtcttgaa gatgcttatg atgtagcagc ttacatgaat tcacaagctc
      961 gtcctattaa agcaaataga aataaagact ttccagatag aaagattaag cctttagata
     1021 tggatgtagg accttatgat gatatctttt ctacaaccca acatcgctat ggaccttata
     1081 caaatatgat caaaaaataa tttttaaggc aatttttatt gccttaaaaa tttattattt
     1141 catattactt aattttttaa ctagatcttc taaatcttgc atcgaattga ttgcgcttgg
     1201 gttaatttga tattttccat taacaacaaa agcaggggta ccataggttt tagctatatc
     1261 attagctctt tgaaactcgc ttaaaatttc tttagctttt ggggtattta aaaaatttaa
     1321 tacttcattt ttatttacat tcatagcctt taaacctatg tcgtaaaatt catctaaatt
     1381 tgaaaaattt ctttgcttgt ttaaaaaata agaaacaaaa taaacatcag caagtttatg
     1441 agataaacta tcagaataac tcgcatcttt accattttgc tcatctttgt attgagcaaa
     1501 ggtaaaaagc tcattcattt ctttggaaaa ttccccattc attaaactta caggatagag
     1561 tttaaaatgt aaatttggaa aagcttctct cagtttttca agagttccaa atttatgatg
     1621 attataacaa tgtatacatt tataagaaaa tgcttctatt acactatttt cagagctagg
     1681 taaacttgga ttaagggtaa taaaactatt gtttgctaat gcaaaacttg aataaaatac
     1741 aagagctaaa acaaatttgc aaaaaaaatt acgcatatta tatccttggt taaataaaat
     1801 tttcaaagat aattttattt aaaaaaaata aataaaccca aaaataaatt tgggcttatt
     1861 tattttttag gattgaatgc ttgatcaaca ctaaaaggca ttgcttgata atccgtgcct
     1921 gaaccgctga attgaatttg aaccgaaggc tccttagcgc cccagttaaa ttcatcaatt
     1981 ttaggttttg gttctccaag acttacacct ttactaagat taaaagccat tccagcgttg
     2041 cactataaac cataatagaa tctttatctg gttcatattg agttaaagaa gttacaggat
     2101 aaaaccattc attgccattt ttatctacag gttgcaataa atatttttga aattctttat
     2161 tccacccttt atatgcgccc aattcctacc tatacctgct atatctccaa atttgtcgct
     2221 ttcatccatt ttggcaagct cttcatcgct taaagtttta cccactttac ttgcatctat
     2281 atttaaacac actgcacttt gatctaaagt tttgataata gtacttctat aaggatctaa
     2341 aatcttatac aatctccaat catcaacaac attaccattc tcatctactt ctataatagt
     2401 atcacacact gtgcgtacat gcttactatc ttggacgcaa agtatttgtt gaagaaataa
     2461 tgcccatttt ttgcatattg tccatagcat gagaaaaaat ctatatagac agcaggtaat
     2521 ttgcgattga aaatttctct tcccagacat cgtattttac atatctttga ccaaatcccc
     2581 aagttaaagc tccatctttg ttttgacgaa aacttatcat aattccacga ttgtaaatat
     2641 taccccagtt cattagttta ttgttatcat aataccatct gatttcaccc ttggtatctt
     2701 ataataaaga catttgaatt ttcatcccat tccatagcac cacctacaag attattccat
     2761 acagattatg agtctttgcc agattatttt ccaggagcat tatttactaa atatagccta
     2821 tctgaaaatt ttggatccat ttttaatact ttcacatttt caaaaagagt tcctctttga
     2881 tcagtgcctt ccgcttggct ctatgctagc ccatggagtt gtaattttat aaatctcatc
     2941 aatgactttt tgacttttac catttgcggt tttagtataa cttaccttta ctataagaag
     3001 gataaagtcc aaaaatagga attccaccat acgtcttagc cattttagaa ttcacattat
     3061 taagaaatag tttgaccatt tgattttttt atatcgctta agacataacc attattcatg
     3121 ataatagcgg tcaaaggaga caatccataa ggattcattt taatcatacc catttgtcct
     3181 tgaatttgcc aatctatttt cactctacta ggaccaccca tggccattaa agcattaggt
     3241 gcaagtaggg tagaacccgc caaaattgcc atgcaaagag ttttgctaag tctcatgatc
     3301 aatcctttaa aattatttaa gacatcctat tttaagagta tcttaaaacg acttgattta
     3361 aactagctat attttgattc ggattttttg attcgcctat aaatttaagc accaaaacca
     3421 aagcaacaat caccaatgca aaaattttag cattaggttt atttttatct aaaacatagg
     3481 ctataaacat tgcaaaaagc acgacaaaac aacataaaaa tgctataaga cagcaaattg
     3541 ccatattcat aaactttaaa ctaggaatca aataccaacc attactataa agcccatttt
     3601 caaaatcagg tggagttcct ataaaaaatt tttgaaaagc attgagatga ttataagcat
     3661 tttctggaac tacaggggta tccatcccgc attctcctgt tggcaaaaac caactagaag
     3721 cccatttata caaaggtaaa ttaaatggat aaataggaat ttcacgacat ccatctacgc
     3781 ctgcaaaagg attttcagaa tgaaccactt catggatatg atttaaagtt agacaatgct
     3841 ccaagccaag ccaaattcca taaaaagcta agctataaga aaaaattttt ataatattat
     3901 ttgcagggtt gattaatgca atcataccac ctatagccat aacaagcata tcaaatctta
     3961 tatacacaca ttgttcacaa ggtttcataa aaagatattc ttgaaataaa aaatgtgcta
     4021 tacaagtaag tcctatagta actataatca aaatcaacca aggtttgcgc gtatcttgcc
     4081 atttggaaag tgaaaaattt ctgcatttat ctttcatttt tatacaactc atttttgctt
     4141 gctaagttct ttagtaattt caatcaaagc ctctggagag ttgattgcac ttggaacgat
     4201 ttgatatttt ccattaacaa caaaagcagg ggtgccataa ttttgcgaaa taggattggc
     4261 aatttcataa ctttttaaaa gctctgcagc ctctggagtt tttaagaaat tttcaaaatc
     4321 agctttactt acattcattg cttttaaacc gacactataa ttatcagcgt tagcaatagg
     4381 atttttaaga attacatatt ctttaccttc acttaatgcg ctagcactta tacctgctaa
     4441 aaaagcacat acaacaatag atcttgctaa ttttactgga aatttcatta ccctctcctt
     4501 gaaatttggt tttgataaaa ctttttatta a
//
LOCUS       DAPIVO010000088         4355 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.089, whole genome shotgun sequence.
ACCESSION   DAPIVO010000088 DAPIVO010000000
VERSION     DAPIVO010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4355)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4355)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4355
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.089"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..310
                     /locus_tag="RJ239_001680"
     CDS             <1..310
                     /locus_tag="RJ239_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HDV7331778.1"
                     /translation="HNFKAPIGIVQKDKNSYEVYLSDGTELEFDIDGAWKEIENKAFP
                     FDLDFLPQNLANIIKNEFPNTKAREIERKINHYKIKLDNDIKILIDFNGTILYKEFDD
                     "
     gene            complement(319..1935)
                     /locus_tag="RJ239_001681"
     CDS             complement(319..1935)
                     /locus_tag="RJ239_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent metallopeptidase FtsH/Yme1/Tma
                     family protein"
                     /protein_id="HDV7331779.1"
                     /translation="MKNKKIILASFMVLCMLLGILYFKNEPKYIDENLYQSLLSQNLI
                     QKAVIDKDEIWLKAEGENYVIIKDGIDIKTLLSKVPVEVKKDNTLWVFFVLLIFIIAL
                     FISLGYFARKKELAKYPISNKNQNHTQAQNSNINLESSHIKPVISNITFNDVAGVDEV
                     KMELSELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGEAGVPFFYQSG
                     SSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMSNVERDSTLNQLL
                     TQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDRLKILEIYMKD
                     KNNNINLNKIAKASVGFSGAGLETLVNEAAINALRRNSALVEESDFYAVLNKVLLGKK
                     KILSFNNEEKKIQATYQAAKALSAYYFDIGFEKITLIEDRFKEYEHNIRSKSELINRI
                     KVYLAGSRAMRLIYNESYTNSQDDFLKIKELLDYMLSFDMLKESNLSEQKKEMDEFLN
                     SMKDKILKLSELLLEKEKIEYDDVKDIMQV"
     gene            complement(1939..3189)
                     /gene="mtaB"
                     /locus_tag="RJ239_001682"
     CDS             complement(1939..3189)
                     /gene="mtaB"
                     /locus_tag="RJ239_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HDV7331780.1"
                     /translation="MKEKVFFKTFGCRTNIYDTELLKSYVKDYEIINDENKAQIIVVN
                     SCTVTNGADSGIKSYVNTMQKKGIKVILTGCGAVSKGKELLDKKQVFGVLGASNKDKI
                     NEFLGAKTSFYELGNLNFIDKDIVCEYENHTKAFVKIQEGCDFACSYCIIPSVRGKSR
                     SVDEKALLKQVEILGANGYSEIVLTGTNIGSYGLKNGTTLGKLLQKMGQILGIKRIRL
                     GSLEPAQLDESFLEILDEAWLERHLHIALQHTSEKMLRIMRRRSHTDNDLKLFNTIAS
                     KGYALGTDFIVAHPGESEELWQEALRNFKEFPLTHIHAFIFSPRNNTHSATMKDVING
                     TLAKERLNTLKSIVEKNNYEFRKKNQVSLEVLVENQKDGFFEGYDQFFNKIKIKSDKD
                     IAKEWIVISEYEVQEKSNFTNLKG"
     gene            complement(3186..>4355)
                     /locus_tag="RJ239_001683"
     CDS             complement(3186..>4355)
                     /locus_tag="RJ239_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HDV7331781.1"
                     /translation="EKEEYIFKFNDFKNLVDKIREKNSELKELVELKPSVENIEALKA
                     SDKKLEEFEQALNFASVSYSVYEKKIDEELSRVSAEIKVQSLRAVNILVAIVIVIAIA
                     FMLKFIAKKYIKDSERYYTATKIINFININIIFLILLFAYIENITYLVTILGFASAGL
                     AIAMKDMFMSMLGWCVIIFGGSFRVGDRVKVFQNDTTYIGDIIDISFLRITLYEELTL
                     ETYNKNRRSGRIIFIPNNYVFTNLLANYTHHGMKTVLDGIDISVTFDSNLDKAQEIVE
                     NIVTRHAKGYTELARKNIARLQHEYSIKNPKVEPRFFMFFEHWGMRISAWYMTNAYAA
                     LVLRSTISKEIIKEFNKHKDIKIAYPSQNLYLGNLNQNHFEQHHENMYFHARNKD"
BASE COUNT         1473 a          810 c          478 g         1594 t
ORIGIN      
        1 acataatttc aaagcgccta tagggatcgt gcaaaaagac aaaaattcct atgaagtcta
       61 tcttagcgat ggaacagagc ttgaatttga tatagatgga gcttggaagg aaattgaaaa
      121 taaagccttt ccttttgatc tagatttttt acctcaaaat ttagccaata tcatcaaaaa
      181 cgaatttcca aatacaaaag ctagagaaat tgaaagaaaa atcaaccatt ataagattaa
      241 acttgataac gatataaaaa ttcttataga ttttaatgga actatcttat ataaagaatt
      301 tgatgattaa acatatcatc aaacctgcat tatatcttta acatcgtcat attctatctt
      361 ttctttttca agcaaaagct ctgataattt taaaatttta tccttcatag aatttaaaaa
      421 ttcatccatt tctttttttt gttcacttaa atttgactct ttcaacatat caaaactcaa
      481 catataatca agcaattctt taatctttaa aaaatcatct tgcgagttag tataactttc
      541 attgtaaatc aatctcatgg ctctagaacc agccaaataa acttttatac gattgataag
      601 ctctgatttt gatcttatat tatgctcata ttctttaaaa cgatcttcaa tgagagtgat
      661 tttttcaaat cctatgtcaa aataatacgc actcaaagct tttgcagctt gataagtggc
      721 ttgaattttc ttctcttcat tattaaaact taaaatcttt ttcttaccta aaagaacttt
      781 atttaataca gcataaaaat cgctttcctc aactaaagca ctatttcttc ttaaagcatt
      841 aattgctgct tcattgacca aagtttcaag ccctgctcca ctaaaaccta cgcttgcttt
      901 agcgatttta tttaaattga tattattgtt tttatctttc atataaattt ctaaaatttt
      961 aagtctatcc ttaaaatcag gcaaagataa aaaaattctc ctatcaaaac gccccgaacg
     1021 caataaagca ggatccataa gttcgatttt atttgtcgca gctataacta taaccccgct
     1081 attgtcctca aaaccatcca tttgagttaa aagttgattt aaagtgctat ctctttcaac
     1141 atttgacatt tctcctcttg ccttacctac ggcatctatt tcatcaataa aaactatgct
     1201 aggcgccatc attttagctt ttgaaaaaag ctctctaact ctttttgcac ccatacctac
     1261 ataaatttca acaaaacttg aaccactttg ataaaaaaat ggcacccctg cttctcctgc
     1321 aactgctttt gctatcaatg tttttcctac accaggtggg cctaccatta aaacaccttt
     1381 tggcattttt acaccaaatt ctttatattt tttaggattt tgtaaaaaat ccacaagttc
     1441 gcttagctcc attttaactt catcaacacc tgctacatca ttaaaagtaa tatttgaaat
     1501 cacaggtttt atatgggaac tttctaaatt tatatttgaa ttttgagctt gagtgtgatt
     1561 ttgattctta tttgatattg gatatttagc caactctttt ttacgagcaa aataaccaag
     1621 acttataaaa agtgcgataa taaaaataag taaaacaaaa aacacccaaa gcgtattatc
     1681 ttttttaacc tctacgggaa cttttgataa aagtgttttt atatctatgc catcttttat
     1741 aattacgtaa ttttcacctt ctgccttaag ccaaatttcg tctttatcaa tcacagcttt
     1801 ttggattaaa ttttggctta atagactttg ataaagattt tcatctatat atttaggttc
     1861 atttttaaaa tataaaattc ccaaaagcat acataaaacc ataaaagatg ctaaaattat
     1921 ctttttattt ttcattatct agccttttaa atttgtaaag ttagactttt cttgtacttc
     1981 atattcagat ataacgatcc attctttagc tatatcttta tcacttttaa ttttgatctt
     2041 attaaaaaac tgatcataac cctcaaaaaa accatctttt tgattttcta ccaaaacttc
     2101 aagtgaaact tgattttttt tcctaaattc ataattattt ttttctacta tggattttaa
     2161 agtgtttagc ctttctttag ctaaagttcc atttatcaca tctttcatgg tagcagaatg
     2221 cgtgttgttt ctagggctaa aaataaaagc atggatatga gtgagtggaa attctttaaa
     2281 atttcttaaa gcttcttgcc atagctcttc actctcgcct ggatgagcta ctataaaatc
     2341 cgtccctaaa gcatatcctt tgcttgctat agtattaaaa agctttaaat cattatccgt
     2401 atgtgatctt cttctcatta tacgaagcat tttttcactt gtatgttgca atgcaatatg
     2461 caaatgcctt tcaagccaag cttcatctaa gatttctaaa aaactttcat caagctgtgc
     2521 aggttctaaa ctacctagcc ttatgcgttt tatacctaaa atttgtccca ttttttgcaa
     2581 aagcttgcct agggttgtgc catttttaag cccatatgaa cctatattag tccctgttaa
     2641 aacaatttca ctataaccat tagctcccaa aatttcaacc tgttttaaaa gagctttttc
     2701 atccacactt cttgattttc ccctcacgct aggaataata caataagaac aagcaaaatc
     2761 acaaccttct tgaattttca caaaagcttt ggtatgattt tcatactcac aaactatatc
     2821 tttatcaata aaatttaaat ttccaagttc ataaaaactt gtctttgctc ctaaaaattc
     2881 attgatttta tctttatttg acgctccaag cactccaaaa acttgctttt tatctaaaag
     2941 ctccttacct ttgcttacag caccacaacc tgtaagtata actttaatgc cttttttttg
     3001 catggtattt acataagact ttatcccgct atcagctcca tttgtaaccg tgcaagaatt
     3061 tacaacgata atttgtgctt tattctcatc atttataatc tcataatctt ttacataact
     3121 ttttaaaagc tctgtatcat aaatatttgt gcgacaccca aaggttttaa aaaaaacttt
     3181 ttctttcaat ccttattcct tgcatgaaaa tacatatttt catgatgttg ttcaaaatga
     3241 ttttgattta aatttcctaa atataaattt tgcgatggat aagcaatttt tatatcttta
     3301 tgcttattaa attcttttat aatctctttg ctaatcgtac ttcttaatac caaagccgca
     3361 taagcattag tcatatacca tgcagaaatt ctcattcccc aatgttcaaa aaacataaaa
     3421 aaccttggct ccactttagg atttttaata ctatattcat gttgtaaacg agctatattt
     3481 tttctagcaa gctcagtata acctttggca tggcgtgtaa caatattttc cacaatttct
     3541 tgagctttgt caagattgct atcaaaagta acacttatat caatgccatc aagcacggtt
     3601 ttcataccat gatgggtata attagcaagc aaatttgtaa aaacatagtt attaggaata
     3661 aatataatac gcccactacg acgattttta ttataagttt caagcgtaag ctcttcataa
     3721 agagtaatgc gtaaaaaaga aatgtctata atatctccta tataggtagt atcattttga
     3781 aaaactttta cacgatcccc tactctaaaa cttccgccaa aaataatcac acaccatcca
     3841 agcatagaca taaacatatc tttcatagca atagctaagc ccgcagaggc aaaaccaagt
     3901 atagttacaa gataagtaat attttctata taagcaaaga gcaaaataag aaaaataata
     3961 tttatattaa taaaattaat aatcttcgta gcagtataat atctttcact atccttaatg
     4021 tattttttag caataaattt caacataaaa gctatagcta taacaataac aatagcaaca
     4081 agtatattta cagcccttaa gctttgaact ttaatctcag cacttactcg agaaagctct
     4141 tcatcaattt ttttctcata aacagaataa gaaacactag caaaatttaa agcttgctca
     4201 aattcttcca gctttttatc cgaagctttt aaagcttcta tattctcaac acttggttta
     4261 agctcaacta attccttaag ttctgagttt ttttccctga ttttatctac taaattttta
     4321 aaatcattaa atttaaatat atactcttcc ttttc
//
LOCUS       DAPIVO010000089         4267 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.090, whole genome shotgun sequence.
ACCESSION   DAPIVO010000089 DAPIVO010000000
VERSION     DAPIVO010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4267)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4267)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4267
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.090"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            41..817
                     /gene="surE"
                     /locus_tag="RJ239_001684"
     CDS             41..817
                     /gene="surE"
                     /locus_tag="RJ239_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HDV7331782.1"
                     /translation="MKEILITNDDGYESEGLKKLIKMLTKEFKAKITIVAPASEKSAC
                     SHSITLTKPLRFVKVGKRFYKLDDGTPADCVYLALHALYKKRLPDLVISGINKGANVG
                     EDITYSGTCAGAMEAVLQGIPAIALSQFYKKSEKELDYKNALQITKKIIQNIFDKGFP
                     LEKKEFLNINFPAKSKIKGIKICKAGKRVYNFEAHSNVNPRGVEYYWLAAANLDFEDE
                     KNSDIALLKKGYATITPIMLDLTAYERMKKVKKWLKANDE"
     gene            807..1466
                     /locus_tag="RJ239_001685"
     CDS             807..1466
                     /locus_tag="RJ239_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
                     synthase TcdA"
                     /protein_id="HDV7331783.1"
                     /translation="MMNDRFTRIKWLVGEEKFQKISQTKVLVCGLGGVGGICVDALYR
                     SGFKNLTLIDADKFEITNQNRQIHSENIGEEKAKVFERIYKVKGIVSKIDENFLKNFD
                     LSEFDLIIDAIDDIPAKVALAHLIDFKKQIFISSTGGARKLDPTRIKTTSIFKTHGDA
                     LAKKFRYELRKSGFKGNFDVVFSDEEAHCKDLGSFMGVTASFGLALASLALRKVLAKK
                     S"
     gene            1450..1908
                     /locus_tag="RJ239_001686"
     CDS             1450..1908
                     /locus_tag="RJ239_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV7331784.1"
                     /translation="MLRKADIKDLNACLSLFEQSVKTLCAKDYTKDQICAWIKIDRQQ
                     WEEKFKYDEIFVYEKRGKIASFISVKQEQKLLDLLFTHPDFVRQGLAQNLLDFILKTY
                     LHNEIYTFASLSAKDFFLKNGFELIRENKVIKEGQNLKKILMKKDVIYKN"
     gene            complement(2018..2398)
                     /locus_tag="RJ239_001687"
     CDS             complement(2018..2398)
                     /locus_tag="RJ239_001687"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HDV7331785.1"
                     /translation="MNITLLKSKIHRASVTEARLDYIGSISIDEKLLQASGILEYEKV
                     QVVNVNNGARFETYTIATQEEGVVCLNGAAARLAEVGDKVIIMSYADFNEEEAKTFKP
                     KVVFVDENNTATKITNYEKHGAIF"
     gene            complement(2395..3243)
                     /locus_tag="RJ239_001688"
     CDS             complement(2395..3243)
                     /locus_tag="RJ239_001688"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HDV7331786.1"
                     /translation="MQVITSVKEAKQIVKDWKSHQLSIGYVPTMGFLHDGHLSLVKHA
                     KTQDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDNGVDMVFIPDATQMYLKNF
                     STYVDMNTITDKLCGAKRPGHFRGVCTVLTKFFNILNPDIVYMGQKDAQQCVVVRHMV
                     DDLNFDLKIQICPIIREEDGLAKSSRNVYLSKEERKASLAISQSIFLAEKLVREGEKN
                     TSKIIQAMKDILEKEKLIKIDYIELVDFNTMENIENITDNVLGAVAAFVGKTRLIDNF
                     LVQGLK"
     gene            complement(3254..4078)
                     /gene="panB"
                     /locus_tag="RJ239_001689"
     CDS             complement(3254..4078)
                     /gene="panB"
                     /locus_tag="RJ239_001689"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HDV7331787.1"
                     /translation="MRKSILSFLEKKAKNEKITMVSAYDYHSARILDNSDIDIILVGD
                     SLAMTVLGMQDTLSVTMDEMLIFTKAVSRGAKKSFVLADMPFMSYQSSDRDAILNASR
                     FIKESHANGVKVEGGIEIASKIKLISQSGIPVVAHLGLTPQAVNMLGGYRVQGKDLQS
                     AQKIIDDAKAVQDAGACMLVLECVPVKLAQKISSILEIPTIGIGSGKYCDGQVLVYHD
                     LLGLNKDFKAKFVKHFDKIDPQVGVEKYRDEVKSGIFPSQEHSFDYLDDELLDKLY"
BASE COUNT         1463 a          677 c          675 g         1452 t
ORIGIN      
        1 tatgttaaaa tccagatttt tatcttttgc aaggaagaca atgaaagaaa ttcttatcac
       61 taatgacgat ggttatgaaa gcgaaggact taaaaaactc attaagatgt taacaaaaga
      121 atttaaagcc aagatcacca tagtagctcc tgctagtgaa aaatcagctt gttcgcactc
      181 tataacccta accaaacctt tgcgttttgt taaagtggga aaaagatttt acaaacttga
      241 tgatggcact ccagcagatt gtgtttatct tgctttgcat gctttataca aaaagcgttt
      301 gcctgatctt gtaataagtg ggattaataa aggtgctaat gtaggcgagg atattaccta
      361 ctcaggaact tgcgcaggag ctatggaggc ggttttacaa ggaattcctg ctatcgctct
      421 ttctcaattt tataaaaaaa gcgaaaaaga actagactat aaaaatgctt tacaaattac
      481 caaaaaaatc attcaaaata tttttgataa aggttttcct ttggaaaaaa aagaattttt
      541 aaatatcaat tttcctgcaa aatcaaaaat caaaggcatt aaaatttgta aagcaggcaa
      601 aagggtttat aattttgaag cccattcaaa tgtcaatccg agaggagtag agtactattg
      661 gcttgcagcg gcgaatttag actttgaaga tgagaaaaat agcgatattg ccttacttaa
      721 aaaaggctac gctacaataa cacctataat gctggatctt acagcttatg aaagaatgaa
      781 aaaagttaaa aaatggttaa aggcaaatga tgaatgatag atttacacgt ataaaatggc
      841 tagttggaga agaaaaattt caaaaaattt cacaaacaaa agttttggtt tgcggacttg
      901 gtggagtggg tggaatttgc gttgatgcgc tttatcgtag tggttttaaa aaccttactt
      961 taatcgatgc ggataaattt gaaatcacta atcaaaatcg ccaaattcat agcgaaaata
     1021 taggcgaaga aaaggctaaa gtatttgaaa gaatttataa ggttaaaggt atagtcagta
     1081 aaatcgatga aaatttttta aaaaattttg atttaagcga gtttgatctt atcatagatg
     1141 ccattgatga tattcctgca aaagtagctt tggctcatct tatagatttt aaaaaacaaa
     1201 tttttatctc ctcaacaggt ggagctagaa agcttgatcc aacacgcatt aaaactacaa
     1261 gtatttttaa aactcacggc gatgctttag cgaaaaaatt tcgttatgag cttagaaaat
     1321 caggctttaa gggaaatttt gatgtggtat tttcagatga ggaagcgcat tgtaaagatc
     1381 ttggatcttt tatgggtgtg actgcatctt ttggtttagc cctagccagc ttggcattaa
     1441 gaaaagttct tgctaagaaa agctgatatt aaagatttaa atgcttgttt gtcgcttttt
     1501 gagcaaagcg taaaaacact ttgtgctaag gattatacaa aagatcaaat ttgtgcttgg
     1561 attaaaattg atagacaaca atgggaagaa aaatttaaat atgatgagat ctttgtctat
     1621 gaaaaaagag gaaaaatcgc aagttttata agtgttaaac aagagcagaa attgcttgat
     1681 ttgcttttta ctcatcctga ttttgttaga caaggtttag cacaaaattt acttgatttt
     1741 attttaaaaa cttatttgca taatgaaatt tacactttcg catccttaag tgctaaagat
     1801 tttttcttaa aaaatggttt tgaacttata agggaaaaca aggttatcaa agagggacaa
     1861 aatttaaaaa aaattttaat gaaaaaagat gtgatttata aaaactagaa gttaagataa
     1921 gcaaaaataa tggattaaaa gatataaaaa tcattttttt ctatcttaga taaatgaatt
     1981 tatctaagat agaaaaaatt acaaaaatag ctagatgtta gaaaatagct ccgtgttttt
     2041 cataatttgt tatttttgta gcagtgttat tttcatccac aaaaacaact tttggtttaa
     2101 atgtttttgc ttcttcttca ttaaaatcag cataagacat gatgatcacc ttatctccca
     2161 cttctgcaag acgagccgca gcaccattta agcatacaac tccttcttct tgcgtggcta
     2221 tggtataggt ttcaaatcta gcgccattat tgacattgac tacttggact ttttcgtatt
     2281 ctaaaattcc actcgcttgc aataattttt catctatact tatacttcct atataatcaa
     2341 gcctagcttc tgttacgctt gcgcgatgta tttttgattt gagtaaagtg atattcattt
     2401 taatccttgt actaaaaaat tatcaatgag tcttgttttt ccaacaaaag cagccaccgc
     2461 tcctaaaaca ttatcagtga tattttcgat attttccatg gtgttaaaat cgactaattc
     2521 tatataatcg attttgatta gtttttcttt ttctaaaata tctttcatag cttggatgat
     2581 cttagaagta tttttttctc cctctcggac taatttttca gccaaaaaaa tgctttgaga
     2641 tatagctagt gacgcttttc tttcttcttt gctaagatat acatttctag agcttttagc
     2701 taagccatct tcttctctaa tgataggaca aatttgaatt tttaaatcaa aatttaaatc
     2761 atcaaccata tgcctaacga ctacgcattg ctgcgcgtct ttttgcccca tatagactat
     2821 atcagggttt aggatattaa aaaatttagt taaaaccgtg caaacgcctc taaaatgccc
     2881 cggtctttta gccccgcaaa gtttatcagt gatcgtattc atatctacat aggtgctaaa
     2941 attcttaaga tacatttgag ttgcatcggg gataaaaacc atatcaacgc cattatcttg
     3001 acacatttta atgtcgcgtt ctaaatctct tggataacta gaaaaatctt cattaggccc
     3061 aaattgcata ggatttacaa agatacttac tataacctta tcttgtgttt tggcatgttt
     3121 gactaaactt aaatgtccat cgtgtaaaaa acccatggtt ggaacatagc ctatactaag
     3181 ttgatgtgat ttccaatctt ttacaatttg ttttgcttct ttgacagaag taatgacttg
     3241 catatttgta tccttagtat aatttatcta ataattcatc atctaaataa tcaaagctgt
     3301 gctcttggga aggaaaaata ccgcttttaa cttcatctct atatttttca actcctactt
     3361 gaggatcaat tttatcaaaa tgctttacaa attttgcttt aaaatcttta tttaaaccca
     3421 aaagatcgtg ataaactaaa acttgtccat cgcagtattt gcctgaacct atgccgattg
     3481 ttggaatttc taaaatagag cttatttttt gtgctagttt tacaggcaca cattctaaaa
     3541 ccaacataca agcacccgca tcttgcacag cttttgcatc atctataatt ttttgggccg
     3601 attgtaaatc tttaccttga accctatagc cacctagcat atttacagct tgtggggtta
     3661 gtcctaggtg agcaacgacg ggtattcctg attgggaaat caatttaatc ttacttgcga
     3721 tttctatacc cccttccact tttaccccat ttgcgtggct ttctttgata aatcttgagg
     3781 catttaagat agcgtcacga tctgaacttt gataagacat aaaaggcata tcagcaagta
     3841 cgaaagactt tttagctccg cgagaaacag ctttggtaaa aatcaacatt tcatccatag
     3901 taacacttaa agtatcttgc atgccaagca ctgtcatagc taatgaatct ccaaccaata
     3961 taatatctat atcgctattg tctaaaattc ttgcactatg ataatcatac gcacttacca
     4021 tggttatttt ttcatttttg gccttttttt ccaaaaaact aagaatactt tttctcattt
     4081 aaaatacctc gtttagctat aaaatagtaa gcaaaaaact agcatataaa ttttcataaa
     4141 tagtaaataa acgataaaac aaaatatatt taattaatgg attgttttaa tggttacaat
     4201 tttagaaaat ttcagttcat gttaaaggat atttaaataa aataaagctt taaaaagtat
     4261 tttgttt
//
LOCUS       DAPIVO010000090         4232 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.091, whole genome shotgun sequence.
ACCESSION   DAPIVO010000090 DAPIVO010000000
VERSION     DAPIVO010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4232)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4232)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4232
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.091"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            1..420
                     /locus_tag="RJ239_001690"
     CDS             1..420
                     /locus_tag="RJ239_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HDV7331788.1"
                     /translation="MKKILLLGALFAVNLWAVNDIEVKNAFVKQTPPHAQNSAIFLTI
                     FNNTNKDIALISAKSDISEVSELHTHIHKDGKMMMQKIPEIIIKAHSSTELKSGGYHI
                     MLLKLKKPIIKDTKVNLDLKFNNHKTIELKNIDSKEF"
     gene            424..876
                     /locus_tag="RJ239_001691"
     CDS             424..876
                     /locus_tag="RJ239_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331789.1"
                     /translation="MRKIIFILAFAFVIAILYIIFDFYVIKDSQKITKTDFSTPLTCD
                     LNVKDCTYSFNNKKVLISLNPKPLQSLDVTNLKIVNLGNYNNLGIKIYGLNMYMGEIK
                     PKIHRLNSTDYESKIVLAACVLDTMRFRVEFMDNNKPIGFYFDFELKK"
     gene            873..1433
                     /locus_tag="RJ239_001692"
     CDS             873..1433
                     /locus_tag="RJ239_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HDV7331790.1"
                     /translation="MKKNIILFIVIVAIILGVIFFIKNHQNSYDFILKSDLKEETTLK
                     DFKGDKLIIYFGYTYCPDVCPATLSLVGKALKQINNPKAHLLFISLDPNRDNNLSNTN
                     EWLRYFYPKADALIAKDEKTLQKITKQYNVQYQKIDLNDSFMGYSIAHSNMLYLIDEK
                     GHFYKEINDLNPQEILRELRIFLNSQ"
     gene            complement(1440..2339)
                     /gene="cysM"
                     /locus_tag="RJ239_001693"
     CDS             complement(1440..2339)
                     /gene="cysM"
                     /locus_tag="RJ239_001693"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase B"
                     /protein_id="HDV7331791.1"
                     /translation="MKVHEKVSELIGNTPIIHLKKFGINVFAKCEFLNPSHSIKDRAA
                     FEMIKDALDSKKINQDTTIVEATSGNTGISLAMICADLGLKFIAVMPESMSLERRKMI
                     TLFGARLELTPANLGMKGAVDKANEILLNTPNSFMVSQFENISNKNAHRKNTALEILR
                     DLDNELDIFVAGFGTGGTISGVGEILKEKLEKVHIVGVEPLNSPLLSKGEAGSHKIQG
                     IGANFIPAILNKEVIDEVITVSNEDAINTAKELAKSGLMVGISSGANVFAASMLAKKF
                     PDKRILTMLNDTAERYLSTDLFA"
     gene            complement(2466..2762)
                     /locus_tag="RJ239_001694"
     CDS             complement(2466..2762)
                     /locus_tag="RJ239_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HDV7331792.1"
                     /translation="MTKADFISLVAQTAGLTKKDATTATDAVISTITDVLAKGDSISF
                     IGFGTFSTQERAAREARVPSTGKTIKVPATRVAKFKVGKNLKEAVAKASGKKKK"
     gene            complement(2864..>4232)
                     /gene="ciaB"
                     /locus_tag="RJ239_001695"
     CDS             complement(2864..>4232)
                     /gene="ciaB"
                     /locus_tag="RJ239_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="invasion protein CiaB"
                     /protein_id="HDV7331793.1"
                     /translation="DDAMEFLRKNHLYQKTPEGEICERSYGVLVRIGNLWKFVPYARF
                     FENEILKLEFAFENMIDQLKIFASSEEEKAYIEYFEKLKLAFCEKDEDRVIKAWQEAE
                     FAWMKVKSPLQVGHPLEYYEDNYTHAVALEWDIRIEDENDFDVLKFGNEIKESFEHVY
                     KNIGLEDCELEKEVLSNIEKTQLYICTPMIFYGAELKGLFSAQVVPNDEFVSSKAGKK
                     IFAFINFVYENAKTKPFMKISSEVFDKEFLDFGRNILFYQEKIWKRVYEVSTIGHEFG
                     HIFFIANDTEKTMNQSGFFKNIEEYKATTGGLINFFYHEQDDLIMPVFHELIKRAIGL
                     ISWQRVDEVRPYYTEGLIHLSLLFESEVLIFENNNLKINFDLGYYEKFKELTLKNYHE
                     LAKHYALRLDAKEFLSRFCEIEDNIFLPIMPKCKEFVKFYYDLYEKIGNEIDNSGEFE
                     RYKKK"
BASE COUNT         1500 a          700 c          478 g         1554 t
ORIGIN      
        1 atgaaaaaaa ttcttctctt aggtgctctt tttgctgtaa atctttgggc tgttaatgat
       61 atagaggtaa aaaatgcctt tgtaaaacaa actccacctc atgcgcaaaa tagtgctatt
      121 tttcttacta tttttaataa tactaataag gatattgctc taataagtgc caaaagcgat
      181 atcagtgaag tcagtgaact gcatacacat atacataaag atggaaaaat gatgatgcaa
      241 aaaattcctg aaattattat aaaagctcat tcaagcacag agcttaaatc tggaggttac
      301 catataatgc ttttaaaact aaaaaaacct attattaaag acacgaaggt aaatttagat
      361 ttaaaattta ataatcacaa aaccatagag ttaaaaaata ttgattctaa agaattttaa
      421 ttaatgagaa aaattatttt tatcctagct tttgcttttg ttattgctat tttatatatt
      481 atttttgatt tttatgtaat aaaagattct caaaaaataa caaaaactga tttttctacc
      541 ccattgactt gcgatcttaa tgttaaagac tgcacatata gttttaacaa taaaaaagtc
      601 ttaatttccc taaatcccaa acccttacaa tctttagatg ttacaaatct aaagattgta
      661 aatctaggaa attataacaa cttaggaatt aaaatttatg gattaaatat gtatatgggc
      721 gaaattaaac ctaaaataca tcgattaaat tcaacagact atgaaagtaa aatagttctt
      781 gctgcttgcg ttttagatac tatgcgtttc agggtagaat ttatggataa taataaaccc
      841 atagggtttt attttgattt tgagctaaaa aaatgaaaaa aaatattatt ttgtttatag
      901 ttatagttgc cattatttta ggtgtaatat tttttattaa aaatcatcaa aattcttatg
      961 attttatctt aaaatcagac ttaaaagagg aaaccaccct aaaagatttt aaaggagata
     1021 agcttattat ctattttgga tatacttatt gccctgatgt ttgtccggca actcttagtt
     1081 tagtaggcaa agccttaaag caaatcaata atcctaaggc tcaccttctt tttatttctt
     1141 tagatccaaa tagagataat aacttaagca atacaaacga atggttacga tacttttacc
     1201 caaaagcaga tgccttaatt gcaaaagatg aaaaaactct tcaaaaaata acaaaacaat
     1261 ataatgttca atatcaaaaa atagatctaa atgattcttt tatgggttat tctatagcac
     1321 atagcaatat gctttatctt attgatgaaa aaggtcattt ttataaagaa attaacgatt
     1381 taaatccaca agaaatttta agagaactta gaatttttct aaattctcaa taattatact
     1441 taagcaaaaa gatcggttga gaggtatctt tcagccgtat cgtttagcat agttaaaatt
     1501 cttttatctg gaaatttctt tgctagcata cttgcggcaa atacatttgc tccacttgat
     1561 atacctacca ttaaaccact tttggcaagt tctttggctg tatttatagc atcttcatta
     1621 cttactgtga tcacttcatc tataacttct ttatttaaaa tagcaggtat aaaattcgcc
     1681 cctattcctt gtattttatg gcttcccgct tcacctttgc taagcaatgg agaatttaga
     1741 ggctcgactc caacaatatg cactttttct aatttttctt ttagtatttc cccaactcca
     1801 ctaatagtac cgccagttcc aaaaccagct acaaaaatat caagttcatt atccaaatct
     1861 cttaaaattt ctaaagccgt attcttacga tgcgcatttt tatttgaaat attttcaaat
     1921 tgagaaacca taaaagaatt tggagtattt aataatattt catttgcttt atcaaccgct
     1981 cctttcattc ctaaatttgc aggagttaat tctaacctag cgccaaagag tgttatcatt
     2041 tttcttcttt ctaaactcat agattcgggc attacagcaa taaatttaag tcccaaatct
     2101 gcacaaatca tagccaaaga aattccagta tttccactag ttgcttcaac tattgtagta
     2161 tcttgattaa tttttttact atctaaagca tctttaatca tttcaaaagc tgctctatct
     2221 tttatagaat gactaggatt taaaaattca catttagcaa aaacattgat accaaatttt
     2281 ttcaaatgta taataggagt atttcctata agctcactta ctttttcatg tactttcata
     2341 attttaatat ccttttttgt ttaataatga tagttttata aaagtttaaa aaaataaagt
     2401 aaataaaaga tacaaaatat ctgaattaat taagaaagaa ggctagaatt tatctagccg
     2461 aagttttatt ttttcttttt gccgcttgct tttgcaacag cttctttaag gtttttacct
     2521 accttaaatt ttgcaactct tgtagcagga actttgattg tttttcctgt gcttggtact
     2581 ctagcttctc tagcagctct ttcttgagtt gaaaaagtac caaaaccaat aaaactgatg
     2641 ctatcacctt tagctaaaac atcagtaata gtagaaataa ctgcatcagt agcagtagta
     2701 gcgtcttttt ttgttagccc agctgtttga gcaactaatg aaatgaaatc tgctttagtc
     2761 ataaaagctc ctttgtttta attgaaacgc ctaattttag catatttaaa aaacaatatc
     2821 aagtaaaaaa cagctttttt taagtttttt tcaaaaaact ttattatttt ttcttatatc
     2881 tttcaaattc tccactatta tcaatttcat taccaatttt ctcgtataaa tcataataaa
     2941 atttaacaaa ttctttacac ttaggcataa taggaagaaa aatattatct tcaatttcac
     3001 aaaatctact taaaaactct tttgcatcaa gtcttaaagc atagtgtttt gccaattcat
     3061 gataattttt taaagttagc tctttaaatt tttcataata ccctaaatca aaatttatct
     3121 tcaaattatt attttcaaaa atcaatactt cgctttcaaa aagcaagcta agatgaataa
     3181 gtccttccgt ataataaggt ctaacttcat caaccctttg ccaagaaata agtccaatag
     3241 ctctttttat aagttcatga aaaacaggca ttatcaagtc atcttgttca tgataaaaga
     3301 aatttataag tccacctgta gtagctttat attcttctat atttttaaaa aaaccactct
     3361 gattcattgt tttttcggta tcattagcaa taaaaaatat atgaccaaat tcatggccta
     3421 tagttgatac ttcataaacc cttttccaaa ttttttcctg ataaaataaa atatttcttc
     3481 caaaatccaa aaattcttta tcaaaaacct cgctagaaat tttcataaaa ggctttgttt
     3541 tagcattttc atatacaaaa tttataaagg caaatatttt tttgcccgcc ttagaactta
     3601 caaactcatc atttggaacg acttgagctg agaataaacc tttaagttca gcaccataaa
     3661 atatcatcgg agtgcaaata taaagttgag ttttttctat attagataaa acttcttttt
     3721 ctaattcaca atcttcaagt cctatatttt tataaacatg ttcaaaactt tccttaattt
     3781 cattaccaaa tttcaaaaca tcaaaatcat tttcatcttc tattcttata tcccattcta
     3841 atgccaccgc atgagtataa ttatcttcat aatattctaa aggatgtccc acttgtaaag
     3901 gtgattttac tttcatccaa gcaaattcag cttcttgcca agcttttata accctatctt
     3961 catctttttc acaaaacgct aattttaatt tttcaaaata ttctatataa gctttttcct
     4021 cttcgctgct agcaaatatt ttaagctgat caatcatatt ttcaaaagca aattctaatt
     4081 ttaaaatttc attctcgaaa aatctcgcat aaggaacaaa tttccataaa tttcctattc
     4141 taactaaaac accatagctt cgctcacaaa tttctccttc tggagttttt tgatataaat
     4201 gatttttacg taaaaattcc attgcatcat ct
//
LOCUS       DAPIVO010000091         4143 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.092, whole genome shotgun sequence.
ACCESSION   DAPIVO010000091 DAPIVO010000000
VERSION     DAPIVO010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4143)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4143)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4143
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.092"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(16..1236)
                     /locus_tag="RJ239_001696"
     CDS             complement(16..1236)
                     /locus_tag="RJ239_001696"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HDV7331794.1"
                     /translation="MLNNTLFFKQSEIHTISSYANRINDEVKSGDIGYYHLIDTSLNL
                     IDESLQFIQDKEYVKNIVLVGMGGSSCGVKALRDMLFNEKSNQRELFILDNTSSHSFN
                     KTLEKIKLEESLFLIISKTGSTIEVVSLFKLLIEHFKLDMQELKKYFVFITDKDSKLH
                     QEGENLGIKCFFIPANVGGRFSILSAVGIVPLCFCGYNAKALLEGAKACFEDFFTHKK
                     DEILQKAYHYCTHKNANINVLFSYSDAFKGFNEWYIQLIAESLGKKQGYKRIGLTPIA
                     LIGARDQHSFLQLIMDGPKNKTVTFLKIKDAQKAPIIPDIHFKFLDSLSNKVNLHELL
                     NAQCDATMHALIAENLSVDVIELEKLDAWHAGYLMYYYELFTSTCGVMLGINTYDQPG
                     VEVGKLILKNILNS"
     gene            complement(1230..2054)
                     /gene="galU"
                     /locus_tag="RJ239_001697"
     CDS             complement(1230..2054)
                     /gene="galU"
                     /locus_tag="RJ239_001697"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HDV7331795.1"
                     /translation="MLQTCIFPAAGYGTRFLPATKTLPKEMLPILTKPLIHYGVDEAL
                     EAGMENMGFVTGRGKRALEDYFDISYELEHQISGTKKEYLLDEIRSLINRCTFTFTRQ
                     NQMKGLGDAVLKGRPLVGDEAFGVILADDLCVNEEGLNVMAQMVKIYEKYRCTIIAVM
                     EVPKEQVSNYGVISGNFVEENLIMVNSMIEKPSPDEAPSNLAIIGRYILTPDIFGILE
                     NTKAGKNGEIQLTDALLTQATNGMVLAYKFQGKRFDCGSVEGFVEATNYFYEKSKC"
     gene            complement(2136..4109)
                     /gene="acs"
                     /locus_tag="RJ239_001698"
     CDS             complement(2136..4109)
                     /gene="acs"
                     /locus_tag="RJ239_001698"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HDV7331796.1"
                     /translation="MLNQNNQELFKPSKEFSRNARIKNLCEYYDLCDEAKEDFEGFWK
                     RQAFEKIEWFSPFSRVLNEDKAPFYKWFEGGTLNVSYQCLDRHMKTRRNKAALIFEGE
                     MGDYEVYTYRRLLHETCKAANLLKKFGVKKGDRVVIYMPMIPETAIVMLACARIGAIH
                     SVVFGGFSPEALRDRIIDAGAKLVVTADGAFRRGKPYMLKPAVDKALSEGCESVEKVL
                     IVIRNNEPIEYIKGRDYVYNELVKNESYKCEPEIMDSEDLLFLLYTSGSTGKPKGVMH
                     ASAGYILWAQMTMEWVFDIKDYDNYWCSADVGWITGHTYVVYGPLACGATTIMHEGTP
                     TYPNSGRWWRMIEEYQISKFYTSPTAIRMLHADAPNEPRKYDLSTLEVLGTVGEPINP
                     SAWKWFYDEIGGTKSPIVDTWWQTETGGHMITPLPGATPLKPGCATLPLPGIFAEVID
                     EEGNKKDEGEDGLLCITKPWPSMIRGIWGNDERYIESYFSQAKKDGKAVYFSGDGAFY
                     DKNGYITITGRTDDVVNVAGHRIGTAEIESAIAKHPSVAESAVVSILDTIKGESLFAF
                     VVLSPASSCDLGGAIETLKELNDILRVEIGPIAKIEKILYTPGLPKTRSGKIMRRILR
                     TIARGEEIKQDISTLEDSKVVETIVKLAKAEFE"
BASE COUNT         1312 a          856 c          551 g         1424 t
ORIGIN      
        1 tttaatgaat tttgattaag aatttaatat attttttaag atcaactttc caacttccac
       61 accaggttga tcataagtgt taatccctag cataacaccg caagttgaag taaaaagttc
      121 ataataatac atcaaatatc ccgcatgcca agcgtcaagt ttttcaagtt ctatcacatc
      181 aacactcaaa ttttcagcga ttaaagcgtg catagttgca tcacattgag cgtttaaaag
      241 ttcgtgaaga ttgactttat tacttaaaga atctaaaaat ttaaaatgaa tatcagggat
      301 aataggtgct ttttgagcgt ctttgatttt taaaaaagtt acagttttat ttttaggtcc
      361 atccatgatg agttgtaaaa aactatgttg atctcttgcg ccaatgagtg caataggagt
      421 taaacctatg cgtttatagc cttgcttttt acctaaactt tcagcaataa gctggatata
      481 ccattcatta aagcctttaa aagcatcgct atatgaaaaa agtacattga tattggcatt
      541 tttgtgtgta caataatgat aggctttttg taaaatttca tcttttttgt gagtaaaaaa
      601 atcttcaaaa caagctttag ctccttctaa aagagctttg gcattatagc cacaaaaaca
      661 aagtggaact atacctacgg ctgaaagtat gctaaaacga cctcctacat ttgcagggat
      721 aaaaaagcat ttaataccta aattttcacc ttcttgatga agttttgaat ccttatcggt
      781 aataaaaaca aagtattttt ttaattcttg catatcaagt ttaaaatgtt caataagaag
      841 tttaaaaagc gatacaactt ctatagtact acctgttttg ctgatgatta aaaacaaact
      901 ttcttcaagc ttgatttttt ctaaagtctt attaaaagaa tgcgagcttg tgttatcgag
      961 tataaaaagc tctctttggt tgcttttttc attaaaaagc atatcacgca aggcttttac
     1021 accacaactt gaacctccca ttcccactaa aacgatattt tttacatact ctttatcttg
     1081 aataaattgc aagctctcat cgattaaatt caaacttgtg tcaataagat gataataccc
     1141 tatatctcca ctttttacct catcattaat acgatttgca taagaactta tagtgtgaat
     1201 ttcactttgt ttaaaaaaaa gcgtattgtt taacatttac ttttctcgta aaaataattt
     1261 gtcgcctcta caaagccttc tacacttcca caatcaaagc gtttcccttg aaatttataa
     1321 gctaaaacca taccattggt tgcttgagtt aaaagcgcgt cggtaagttg aatttcacca
     1381 ttttttcctg ctttagtatt ttctaaaatt ccaaaaatat caggagttaa aatatatctt
     1441 cctatgatag caagattact tggagcttca tcaggacttg gtttttctat catagaatta
     1501 accatgataa gattttcttc tacaaaattt ccagaaatta ctccatagtt tgaaacttgc
     1561 tcttttggta cttccatcac agctatgatg gtgcagcgat atttttcata aatttttacc
     1621 atttgagcca taacatttaa gccttcttca ttaacacaca aatcatcagc caaaattacg
     1681 ccaaaagctt catcgccaac caaaggtcta ccttttaaaa ccgcatcacc taagcctttc
     1741 atttgatttt gtcttgtaaa agtaaaggta caacgattga tcaaagagcg aatttcatca
     1801 agtaagtatt ctttttttgt acctgaaatt tgatgttcaa gttcataaga aatatcaaaa
     1861 taatcctcca aagctctttt tccacgccct gtgacaaatc ccatattttc cattcctgct
     1921 tctaaagctt catcaactcc ataatggatc aaaggcttgg ttaagatagg taacatctct
     1981 ttaggtaaag tttttgttgc aggtaaaaat ctcgtcccat aacctgccgc agggaaaata
     2041 caagtttgaa gcataaaaat ttccttttat ttttttatca ttatagctta tttttatgaa
     2101 ttttcatgca acaaggcaaa gttctttttg ccttgttatt caaactctgc cttagctaat
     2161 ttaacaatgg tttctactac tttagaatct tcaagtgttg aaatatcctg tttgatttct
     2221 tcgcctcttg ctatagttct taaaattctt ctcattattt taccacttct agtttttggc
     2281 aaacctggag tataaagaat tttttctatt ttagctatag gtcctatttc tactcttaaa
     2341 atgtcattaa gttcttttaa agtttctata gctccgccaa gatcacaact ggatgcagga
     2401 cttaaaacca caaaagcaaa caatgactcg cccttaatcg tatccaaaat actcactaca
     2461 gctgattctg ctacacttgg atgtttagca atagcgcttt caatttcagc cgttcctata
     2521 cgatgtcctg caacattaac cacatcatct gttcttcctg tgatggtaat ataaccattt
     2581 ttatcataaa aagcaccatc gccactaaaa tatacagctt ttccatcttt tttagcttga
     2641 gaaaaataac tttctatata gcgttcatca ttgccccaaa ttccacgaat catcgaaggc
     2701 caaggtttag ttatacaaag caacccatct tcaccttcat cttttttatt gccttcttca
     2761 tcaataactt ccgcaaaaat ccctggcaaa ggcaaggtgg cacaacctgg ttttaaagga
     2821 gtggcgcctg gtaaaggcgt gatcatatgc ccacctgttt ctgtttgcca ccaagtatcg
     2881 actataggac ttttagttcc ccctatttca tcataaaacc acttccaagc actaggattg
     2941 ataggctctc caaccgttcc aagcacttca agcgtactta aatcatattt tcttggctca
     3001 ttaggtgcat cagcatgaag cattcttatg gcagttggcg aagtgtagaa tttgcttatt
     3061 tgatactctt ctatcattct ccaccaacgc ccagaatttg gataagtagg agttccttca
     3121 tgcattatag tcgttgcccc acatgctaaa ggcccataaa ctacataagt atgtcctgta
     3181 atccaaccca catcagcact acaccaataa ttatcataat ctttaatatc aaaaacccat
     3241 tccatagtca tttgtgccca aagtatatat cctgcacttg catgcataac tccttttggc
     3301 ttgcccgttg atcctgaagt gtaaagcaaa aacaacaaat cctcactatc cataatttcg
     3361 ggttcacact tataagactc atttttcaca agttcgttat aaacatagtc ccttccttta
     3421 atatattcta taggctcatt attgcgtata actataagta ctttttctac actttcacac
     3481 ccttcactta aagccttatc tactgcaggt tttaacatat aaggtttgcc acgacgaaaa
     3541 gcaccatcag ccgttactac aagtttagct cctgcatcta taattctatc tcttaaggct
     3601 tcaggagaaa accctccaaa tactacacta tgaatagccc caatccttgc acaagctaac
     3661 attactatag ctgtttctgg aatcataggc atataaatta caaccctatc gccttttttt
     3721 actccgaatt ttttaagcaa attggccgcc ttgcaagttt catgcaataa tcttctataa
     3781 gtataaactt cataatcccc catttcacct tcaaaaatca aagcagcttt attgcgtctt
     3841 gttttcatat gacgatcaag acattgataa cttacattta aagttccacc ttcaaaccat
     3901 ttataaaatg gagctttatc ctcatttagc actcttgaaa aaggcgaaaa ccactcaatc
     3961 ttctcaaatg cttgtctttt ccaaaaacct tcaaaatctt ccttggcttc atcgcataaa
     4021 tcatagtatt cacataaatt ttttatacga gcattacgag aaaattcttt acttggctta
     4081 aaaagctctt gattattttg attaagcata aaaactcctt tatggttgtt tttaaacatt
     4141 ata
//
LOCUS       DAPIVO010000092         4095 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.093, whole genome shotgun sequence.
ACCESSION   DAPIVO010000092 DAPIVO010000000
VERSION     DAPIVO010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4095)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4095)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4095
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.093"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            65..640
                     /locus_tag="RJ239_001699"
     CDS             65..640
                     /locus_tag="RJ239_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HDV7331797.1"
                     /translation="MKKIFISFVVLATCLWAKNTAYTDEVVSLYLNKDDTKVIGRLLP
                     TNPFEVLKSENNRVLLKIDGYVNPKAPSVIYFNDSQRIIVAAFSKNTKLNFSQRITGK
                     NGKWDKVSLEIWADKKEFVKDNKEMLNRAKELFVNNCGICHAIHKEKEFTANAWPAIF
                     RSMADRTGIDKKDRWLVIEYLQKNAKDFKTK"
     gene            651..3167
                     /locus_tag="RJ239_001700"
     CDS             651..3167
                     /locus_tag="RJ239_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin guanine dinucleotide-containing
                     S/N-oxide reductase"
                     /protein_id="HDV7331798.1"
                     /translation="MLDRRKFLKIGASLSALPLIPSLSAGKTVEASKVSLGLVKNGEV
                     ITAAHWGILKLTIKDGKIVKSEPWEKVTKMDNPLQHYTADMVYKSRVKYPYVRKSYLE
                     NPDNPKPELRGKDEFVRVSYDEAIKLIAKELKKTRDSKGASAIFGGSYGWKSSGNMQN
                     SRILLHRFLNVTGGFVGATGDYSTGASQVIMPYVVGSIEVYEQQTSWENILSDSKYVV
                     IWGADPLSTLRIAWTSNEQRGLAYFEKLKNSKIKVICIDPVKTTTAKFLNAKWIAPRP
                     NTDVALMMGMASHLIAKKKVNYEFLDTYTTGFDKFKDYLEGKEDGVKKDTKWASKICG
                     IDEKTIKNLAETFYDNPTMIMSGWGMQRAHHGEQPHWMLVTLCAMLGQIGTKGGGFGL
                     SYHYSNGGVPTCKGGVIGGMTAGSLGIWKNGKFKGLSKAEASSEGAEWLQNAASYSFP
                     VARIADALLHPGKTIDHNGAKITYPDIDFIYWVGGNPLVHHQDTNTNVKAWRKPRTVV
                     VNEIYWTPTAKMADIIMPVTSSYERDDITMTGDYSNMHIAPMKQAVEPVGESKDDYVI
                     FSDICKIYGKDVFNAYTENGKKAKDFIKEYYNSALKQTQSFGEAFATPMPSFEEFWAK
                     NKPITFEPTAESLEWTRFSEFIEDPILNALGTDSGLIEIYSETIKNYNYDDCKAHPTW
                     FEPIEWLGNASKEAPFHLLTNHPRDRLHSQLCHTSLRDTYAIKDREPILINSKDAKKL
                     GIKNGDVVRVFNKRGEVLAGAVVNDEIMQGVVRLCEGAWYDPNENGLCKCGNANVLTM
                     DIPTSKLANGNISHTGLVNIEKFKGELPKLTAFSVPKGAN"
     gene            complement(3191..4066)
                     /gene="zupT"
                     /locus_tag="RJ239_001701"
     CDS             complement(3191..4066)
                     /gene="zupT"
                     /locus_tag="RJ239_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HDV7331799.1"
                     /translation="MQFTFEQIFIAILLTLFAGFSTAIGSTIAFFSRKDDLRVLSLGL
                     GFSAGVMIYISFMEILPTALKDFKNHYDSHWAELLGLACFFGGILISLLIDKLIPEDV
                     NPHEPKEDLSELKICPLPQKGQNPPKFHPGEKLHQINTKALKRTGIFTALAIAIHNFP
                     EGFATFISSLDNLTLGIAIAIAVAIHNIPEGLAVSLPIYHATGDKKKAFIYSALSGLA
                     EPLGAFVGALILLPFIGDLTLAISFAVIAGIMVFISLDELLPAAKTYDKAHDSLYGLI
                     AGMAIMALSLNLLGQ"
BASE COUNT         1495 a          673 c          768 g         1159 t
ORIGIN      
        1 agtaataatt aaattgcata gtattaaaat acatttacat caaatttata ttaaggaatt
       61 agtaatgaaa aaaattttca tttcttttgt tgtcctagcg acatgtttat gggcaaaaaa
      121 taccgcctat accgatgaag ttgtatcgct ttatcttaat aaagatgata ctaaagtcat
      181 aggaagactt ttacctacaa atccttttga agtattaaaa agcgaaaata acagggtttt
      241 gctaaaaatt gatggttatg taaatcctaa agcaccttct gtgatttatt tcaatgactc
      301 tcaaagaatt attgttgcag ctttttctaa aaatacaaaa ttaaatttct ctcaaagaat
      361 aactggaaaa aatggcaaat gggataaggt aagccttgaa atttgggcag ataaaaaaga
      421 atttgtcaaa gacaataaag aaatgttaaa tcgagccaaa gagctttttg taaataactg
      481 cggaatttgc cacgctatcc acaaagaaaa agaatttaca gctaatgctt ggcctgcaat
      541 tttccgttct atggctgata gaacaggtat tgataaaaaa gacagatggc tagttataga
      601 atacttacaa aaaaacgcaa aagattttaa aacaaaataa ggagaaaagc atgctagata
      661 gaagaaaatt tttaaaaatt ggagcgagct taagtgcttt acctctcatt ccaagcttaa
      721 gtgcaggaaa aaccgtagaa gcttcaaaag ttagcctcgg acttgtaaaa aatggagaag
      781 tgatcaccgc agcacactgg gggattttaa aacttactat aaaagatggc aaaatagtaa
      841 aaagtgaacc ttgggaaaaa gttacaaaaa tggataatcc tttacagcac tataccgccg
      901 atatggttta taaatctcgt gtgaagtacc cttatgtgcg taaatcctac cttgaaaatc
      961 ctgacaatcc taaacctgaa cttcgcggaa aagatgagtt tgttcgcgta agttatgatg
     1021 aagcgatcaa actcatcgcc aaagaactta aaaaaacaag agatagtaaa ggcgcaagtg
     1081 cgatttttgg tggaagttat ggctggaaat caagtggaaa tatgcaaaac tcacgtatct
     1141 tgcttcatag atttttaaat gtaacaggtg gatttgtagg agctacaggg gactattcta
     1201 caggagcttc tcaagtgatt atgccttatg ttgtaggatc gattgaagtt tatgagcaac
     1261 aaacctcatg ggaaaatatc ttaagcgatt ctaaatatgt tgtgatttgg ggtgctgatc
     1321 cgctttctac tttacgcata gcttggactt caaacgaaca aagagggttg gcgtattttg
     1381 aaaaacttaa aaacagtaaa atcaaagtga tttgtataga tcctgtaaaa accactacag
     1441 cgaaattttt aaatgccaaa tggatagctc cacgcccaaa taccgatgtg gctttaatga
     1501 tgggtatggc aagccattta atcgctaaga aaaaagtcaa ttacgagttt ttagacactt
     1561 acaccactgg ctttgataaa tttaaagact atttagaagg caaagaagat ggagttaaaa
     1621 aagataccaa atgggcaagt aaaatttgtg gtatcgatga aaaaactatc aaaaatttag
     1681 ctgaaacttt ttatgataat cctactatga ttatgagtgg ttggggtatg caaagagcac
     1741 atcatggaga acagcctcac tggatgctag ttactctttg tgcgatgtta ggacaaatcg
     1801 gcacaaaagg aggtggtttt ggactaagct accattatag caatggcggt gttccaactt
     1861 gcaaaggcgg agtgatcggt ggtatgacag caggtagctt aggaatttgg aaaaatggta
     1921 aatttaaagg cttaagcaaa gcagaagctt caagcgaagg tgcagaatgg cttcaaaatg
     1981 cagcgagtta ttctttccct gtagcaagaa tcgctgatgc tttacttcat cctggaaaaa
     2041 ccatagatca taatggtgct aaaatcactt atcctgatat tgattttatc tactgggtag
     2101 gtggaaatcc tttagtgcat catcaagata ccaacactaa tgtaaaagca tggagaaaac
     2161 cacgcaccgt tgtggtaaat gaaatttact ggactccaac agctaaaatg gcagatatta
     2221 tcatgcctgt aacttcatct tacgaaagag atgatattac catgacagga gattattcaa
     2281 atatgcatat agctcctatg aaacaagccg ttgagcctgt gggtgagagc aaagatgatt
     2341 atgtaatttt ctctgatatt tgtaaaattt atggaaaaga tgtctttaat gcctacacag
     2401 aaaatggcaa aaaagctaaa gatttcatca aagaatacta caacagtgcc ctaaaacaaa
     2461 ctcaaagttt tggcgaagct tttgccactc ctatgccaag ttttgaagaa ttttgggcta
     2521 aaaataaacc aatcactttt gaaccaacag ctgaaagttt agaatggact cgtttttcag
     2581 aatttataga agatcctatc ttaaatgctc tgggtacaga ttcaggactc attgaaattt
     2641 actcagaaac gattaaaaat tataattatg atgattgtaa ggcacatcct acttggtttg
     2701 agcctattga atggcttgga aatgcaagca aagaagcacc tttccactta cttacaaatc
     2761 acccaagaga tcgcttgcac tctcaacttt gccacacaag cttaagagat acttatgcaa
     2821 taaaagatag agagccgatt ttaatcaatt ccaaagatgc aaaaaaactt ggtataaaaa
     2881 atggcgatgt agtgcgtgtg tttaacaaac gcggtgaagt tttagcaggg gcggttgtaa
     2941 atgatgaaat catgcaaggg gttgtaagac tttgcgaagg tgcttggtat gatcctaatg
     3001 aaaacggact ttgcaaatgt ggaaatgcaa atgttttaac catggatata ccaacttcaa
     3061 aacttgccaa tggcaatatc tctcacacag ggctcgtaaa catagaaaaa tttaaaggtg
     3121 aactaccaaa acttactgcc ttcagcgtgc caaaaggtgc gaattaaatt taagaaagcc
     3181 gcaaggcttt ctattgtcca agcaaattta aacttaaagc cattattgcc attcctgcga
     3241 taagtccata taaactatca tgagccttat cataagtttt tgcagcgggc aaaagctcat
     3301 caagggatat aaaaaccata attcctgcaa tcacagcaaa acttatagct aaagtaagat
     3361 cgcctataaa aggcaataaa atcaaagctc caacaaaagc acccaaaggc tctgctaaac
     3421 ccgaaagagc tgaataaata aaagcttttt tcttatctcc tgtagcatgg taaattggca
     3481 aactcacagc caaaccttca gggatattgt gtatagccac agctatagct atagcaattc
     3541 ctaaagtaag attatcaaga cttgaaataa aagtagcaaa accttctggg aaattatgta
     3601 tagcaatagc taaagctgta aaaatccctg tgcgttttaa agctttagta ttgatctgat
     3661 gcaacttttc tccaggatga aatttcggag gattttgtcc tttttgaggt aaaggacaaa
     3721 tttttaactc gcttaaatct tctttaggtt catgaggatt aacatcttcg gggattaatt
     3781 tatcaatcaa taaagatatt aaaattccac caaaaaaaca agctagtccc aagagctcag
     3841 cccaatgtga atcatagtga tttttaaaat ctttaagtgc agtaggtaaa atttccatga
     3901 aagaaatata tatcattact ccagctgaaa aaccaagtcc taaagaaagc actcttaaat
     3961 catcttttct ggaaaaaaag gctattgtag aacctatagc tgtagaaaaa cctgcaaaaa
     4021 gagtcagtag tattgctata aaaatttgtt caaatgtaaa ttgcattaat aattcttact
     4081 tctaattaaa attta
//
LOCUS       DAPIVO010000093         3890 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.094, whole genome shotgun sequence.
ACCESSION   DAPIVO010000093 DAPIVO010000000
VERSION     DAPIVO010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3890)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3890)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3890
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.094"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..850
                     /locus_tag="RJ239_001702"
     CDS             <1..850
                     /locus_tag="RJ239_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV7331800.1"
                     /translation="LLNTQSPTHTANNFSITQPNVSIVIKNLENKFDGILFERLGKKL
                     LPTPKALELGKNWLKIIQAYYQSLEKLNDESMLLGEIKIASTQSISEHFLAPILFDFK
                     AEFKNIEIRSQTQNSKECLNLLKNGNIEFAIIEAELDPALVEYENLEINFWQDDELIV
                     ATSDKKLNEKEFYIDELLEQKWILREVGSGLRDKFLNEIGASSKKLNIFLELDRMAAI
                     KELVLQKKAISIFSKKSIEKELKNSTLYEIKLKNIDLKRKFYTLKRKNYNFNRALEKF
                     EKIFKS"
     gene            930..2798
                     /gene="rpoD"
                     /locus_tag="RJ239_001703"
     CDS             930..2798
                     /gene="rpoD"
                     /locus_tag="RJ239_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HDV7331801.1"
                     /translation="MNAKTQEAELEELFQENAKDYITYEKLVKYLTKQPSASTTKKVQ
                     ALMKKHKVQLFSAAEIAQMKNIEDAKRLQEEKQKLQDTSLENEFDLANENDLLEWSRS
                     DSPVRMYLREMGQIALLNKDEEIEISKKIELGEDIIIDAFCSVPYLIDFILDYKEPLI
                     NRERRVKELFKSFDDEEKSDDKLDELDIDEDEENETELESDEENTKKNSKKEDERTLK
                     VIEKFKALEKAKKDWLKTSKDKESGDELLDKLSIAFKKNILKEKLMDLGPTSKLISEI
                     VKSMETALKSDEEFDKELKRLEYRLPMFSDELKKRHADILKDITKLSKEEITERALET
                     TMVSTYMEIKKLFQTKEASEKSFDLEKSRLKEILEQIKRGKKISDEAKGRMAKSNLRL
                     VVSIAKRYTNRGLPFLDLIQEGNIGLMKAVDKFEYKRGYKFSTYATWWIRQAISRAIA
                     DQARTIRIPIHMIETINQINKIIREHLQKDGKEPDVSVIAKEVGLSVDKVKQVIKITK
                     EPISLEAPIGNEDDGKFGDFVEDRNSLSPMDHILKDDLKEQIDEVLDQLNDREKAVIR
                     MRFGLMDDESDRTLEEIGKELNVTRERVRQIESSAIKKLKHPKVGRKLKNYIEGWK"
     gene            complement(2814..3326)
                     /locus_tag="RJ239_001704"
     CDS             complement(2814..3326)
                     /locus_tag="RJ239_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HDV7331802.1"
                     /translation="MKKIYIIRHAKASKSEDIDDFERKLTKSGKEDLKKLFKNLASHE
                     IHPDLVLSSPAVRTAKTAKKIAKFYNFDKNRICFDERLYLCNVENLLKILQDIDDEFN
                     EVFLVGHNPSLMELGELLSSLCLASFPTSSILCLEFDIKEFKNLKKHSGKLVFFEHVR
                     KLKEEKDLGF"
     gene            complement(3323..3841)
                     /locus_tag="RJ239_001705"
     CDS             complement(3323..3841)
                     /locus_tag="RJ239_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HDV7331803.1"
                     /translation="MLTIFLIFLNILCYFLISYDYYNILGLNILFFNGAYWQLLSSMF
                     LHGNLTHLILNMIVLFQFGRMLETYLGALCFIFIYFIGGLLCSLLSVFYVYFDFKYFG
                     ENINVIGASGAICVLMGFYAVIDKNSTKGLIVAILLMSFVPLLMGVNVAWYGHIFGFM
                     CGYILAKIKEVK"
BASE COUNT         1683 a          562 c          546 g         1099 t
ORIGIN      
        1 tcttttaaac actcaaagtc caactcatac agccaacaat ttttccataa ctcaacctaa
       61 tgtttcaata gtaattaaaa atttagaaaa taaatttgat ggcattttat ttgaaagact
      121 tggaaaaaaa ctcttaccta caccaaaagc tttagaacta ggaaaaaatt ggttaaaaat
      181 tatacaagcc tactaccaaa gcttagaaaa attaaacgac gaaagtatgc tcttagggga
      241 aataaaaata gcctcaactc aaagcatttc tgaacatttt ttagctccta ttttatttga
      301 ttttaaggca gaatttaaaa acatagaaat tcgctctcaa acgcagaatt caaaagaatg
      361 tttaaattta ctaaaaaacg gaaatataga atttgcaatc attgaagcag aacttgatcc
      421 agctttagtg gagtatgaaa atttagaaat aaatttttgg caagatgatg aacttatagt
      481 agctacaagt gataaaaaac tcaatgaaaa agaattttat atcgatgaac ttttggaaca
      541 aaagtggatt ttaagagaag taggctcagg cttaagggat aaatttttaa acgaaattgg
      601 tgcaagctca aaaaaactta atatttttct tgaacttgat agaatggctg cgattaaaga
      661 acttgtttta caaaaaaaag caatctctat tttttccaaa aaaagcatag aaaaagaatt
      721 aaaaaattca acactttatg aaattaaatt aaaaaatatc gacctaaagc gtaaatttta
      781 taccttaaaa agaaaaaatt ataattttaa cagagcttta gaaaaatttg aaaaaatatt
      841 caaatcataa acataataac cgatttatat agaaagttaa gcaattttta gataaaatcc
      901 aaagcttata taaatttcaa ggataatcaa tgaacgccaa aactcaagaa gctgaattag
      961 aagaattatt tcaagaaaat gcaaaagatt atatcacata tgaaaaattg gtaaaatatc
     1021 ttacaaaaca accaagtgca tcaaccacta aaaaagtgca agcattaatg aaaaaacaca
     1081 aagtgcaact tttttcagca gctgaaattg cacaaatgaa aaacatagaa gatgcaaaaa
     1141 gacttcaaga agaaaaacaa aaactccaag atacaagcct tgagaacgaa tttgatttag
     1201 ccaatgaaaa cgatttatta gaatggagca gatcagactc tcctgttcgt atgtatttaa
     1261 gagaaatggg acaaattgct ttattaaaca aagatgaaga aattgaaatt tccaaaaaaa
     1321 tagaacttgg cgaagatatt atcattgatg ctttttgttc tgtaccttat ttgatagatt
     1381 ttattttaga ttataaagaa cctttaataa acagagaaag aagggtaaaa gaactattta
     1441 aaagctttga cgatgaagaa aaaagtgatg acaaacttga tgaacttgat atagatgaag
     1501 atgaagaaaa cgaaacagaa ttagaatcag atgaagaaaa tactaaaaaa aacagcaaaa
     1561 aagaagatga aagaacttta aaagttatag aaaaatttaa agctctagaa aaagctaaaa
     1621 aagattggct aaaaacatcc aaagacaaag aaagcggaga tgaactttta gataaattaa
     1681 gcattgcgtt caaaaaaaat attttaaaag aaaaattaat ggatctaggc cctacttcaa
     1741 aacttattag cgaaatcgta aaatcaatgg aaactgcact aaaaagtgat gaagaatttg
     1801 acaaagaact taagcgttta gaataccgct tacctatgtt ttctgatgaa cttaaaaaac
     1861 gccatgcaga tattttaaaa gatattacaa aattgagcaa agaagaaatc acagagcgag
     1921 ctttagaaac aaccatggta agcacttata tggaaattaa aaaactattt caaactaaag
     1981 aagccagtga aaaaagcttt gatcttgaaa aatcacgctt aaaagaaatt ttggagcaaa
     2041 ttaaacgcgg taaaaaaatc tctgatgaag caaaaggaag aatggcaaaa tcaaacttgc
     2101 gccttgttgt aagcatagct aaacgctaca caaatcgtgg tctgcctttc ttagacctta
     2161 tccaagaagg aaatataggt ttgatgaaag ctgtggataa atttgaatac aaaaggggtt
     2221 ataaattttc cacttatgca acttggtgga tcaggcaagc tatttcaagg gctatagctg
     2281 atcaagcaag aaccataaga attccaatcc atatgataga aaccatcaat caaattaaca
     2341 aaattatccg cgaacatcta caaaaagatg gaaaagaacc tgatgtcagt gttatagcta
     2401 aagaagtagg tttaagcgta gataaggtta aacaagttat taaaatcaca aaagaaccaa
     2461 tttctcttga agctccaata ggaaatgaag atgatggtaa atttggagat tttgttgaag
     2521 atagaaattc actttctcca atggatcata tcttaaagga tgatttaaaa gaacaaattg
     2581 atgaagtttt agatcaatta aacgatagag aaaaagcggt aattcgtatg cgttttggtt
     2641 taatggatga tgaaagtgat agaactttag aggaaattgg aaaggaactt aatgtcactc
     2701 gagaaagagt gagacaaata gaaagctcag ctataaaaaa actcaaacac cctaaagtag
     2761 gaagaaaact aaaaaattat atagaaggtt ggaagtaaga gtcaatctcc ttactaaaaa
     2821 cccagatctt tttcttcttt taacttgcgt acatgttcaa aaaaaactaa ttttccgcta
     2881 tgttttttta aatttttaaa ttccttaata tcaaattcta aacacaagat agaagaagtt
     2941 ggaaaagaag ctaaacatag cgaacttaat aactctccaa gctccattaa actaggatta
     3001 tgacccacta aaaatacttc attaaactca tcatcaatat cttgcagaat ttttagcaaa
     3061 ttttcaacat tgcaaagata caatctttca tcaaaacaaa ttctattttt atcaaaatta
     3121 taaaatttgg ctattttttt cgctgtttta gcggttctaa cagcaggact tgatagcacc
     3181 aaatcaggat gaatttcatg cgaagcaaga tttttaaaaa gtttttttaa atcttccttt
     3241 ccactcttag taagttttct ttcaaaatca tcgatgtctt cactcttact tgcttttgca
     3301 tgtcttataa tataaatttt tttcatttta cctcttttat tttagctaaa atataaccac
     3361 acataaaccc gaaaatatga ccataccaag caacatttac ccccataagc aatggcacaa
     3421 aactcataag taaaattgcc actataagtc cttttgtgct atttttatca ataacagcat
     3481 aaaagcccat taaaacacaa attgcaccac tagcgcctat gacatttata ttttctccaa
     3541 aatatttaaa atcaaaatac acataaaaaa cacttaaaag tgagcacaac aatccgccaa
     3601 taaaataaat aaaaataaaa cacaaagcac ccaaataagt ttctaacata cgcccaaatt
     3661 gaaacaaaac tatcatattt aatataagat gagttaaatt tccatgtaaa aacattgaac
     3721 ttaaaagctg ccaataagct ccattaaaaa ataaaatatt caaaccaagg atattgtaat
     3781 aatcataaga aatcaaaaaa taacataaaa tatttaaaaa aattaaaaaa attgtaagca
     3841 aaatataaaa cctttatttt ttataatatt gtcttaaaat tcacataaaa
//
LOCUS       DAPIVO010000094         3619 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.095, whole genome shotgun sequence.
ACCESSION   DAPIVO010000094 DAPIVO010000000
VERSION     DAPIVO010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3619)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3619)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3619
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.095"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            22..1398
                     /locus_tag="RJ239_001706"
     CDS             22..1398
                     /locus_tag="RJ239_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDV7331804.1"
                     /translation="MQQEYYDLDLERAILSSCIMSEEAYASIAGDISPKDFSLKAHQD
                     IFKAVIACSNNKEPISVSFLRKHKKIDEQILAEILATPSMIDLPAYVNELREKSVKRQ
                     LLSFAHLLPTRINEDRAVSEIADEIGKEIFSITNRVNSRDIKDVDMVISELFEEFKKQ
                     KTLENKGIIGLDTGFEGLNKMTKGFKGGELIIIAARPGMGKTTLCLNFIDKVLRQKKG
                     VALFSLEMPATQIMQRMLSSKTSIPLQKILTADLNDDEWERLGDACNDYSQKKLYIYD
                     SGYATIADVRAILRRLKSQDESIGLCVIDYIGLMMSNSNFNDRHLQVSEISRGLKLLA
                     RELDMPIIALSQLNRGLEQRANKRPLMSDLRESGAIEQDADAILFVYRDEVYREQEEK
                     ERENKAKAEGKAYQRLFIPNPMQENAEIIVGKNRNGPVGTIEVVFLKEKSCFVDKPIG
                     YETTEFTG"
     gene            1461..2063
                     /locus_tag="RJ239_001707"
                     /pseudo
     CDS             1461..2063
                     /locus_tag="RJ239_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343994.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2054..2260
                     /locus_tag="RJ239_001708"
     CDS             2054..2260
                     /locus_tag="RJ239_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331805.1"
                     /translation="MGIILGILSLIAGFVAIVLMCGLYFIAFMVFVGIAILIFLSMQP
                     YPYNIIFCAIYLITILALVLWRKT"
     gene            2339..2404
                     /locus_tag="RJ239_001709"
     CDS             2339..2404
                     /locus_tag="RJ239_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001862547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3944 domain-containing protein"
                     /protein_id="HDV7331806.1"
                     /translation="MAYRYDKDLEFLKELSSPELD"
     gene            2566..3066
                     /locus_tag="RJ239_001710"
     CDS             2566..3066
                     /locus_tag="RJ239_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001964913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331807.1"
                     /translation="MSRWWSLYNEILRDVAKKFDVKFDENESTNSIETSLLCKLIEEE
                     LKNSQDENTLRELVNIFELGISNINKQTVVMGLQSLIKIGGFKSYQIAVIVANQVMKV
                     LLGRGLSLAANATLTRALSLFSGPVGWTIMTTWTALDLASPAYRVTIPAVLQIIILRL
                     KHNTKN"
     gene            3085..>3619
                     /locus_tag="RJ239_001711"
     CDS             3085..>3619
                     /locus_tag="RJ239_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331808.1"
                     /translation="MENICQFIIENIDKNSLNTKKIKLVFNMQEQEITTISKIFKVSS
                     EHIIAFYDTSTSFNYFSKTTGICFTGKEVIFKRKEDEVLMKINYEDFKEANKSLPEKT
                     TTLQDIKFPISFHNLGTSYLSFDDFKKKNYIEENDELIINFLHILTSKNNIESFKNES
                     MFPQALEKTNESIKENYI"
BASE COUNT         1375 a          467 c          628 g         1149 t
ORIGIN      
        1 ttatatttat aaggaaaatt agtgcagcaa gagtattatg acttggattt agaacgagct
       61 attttaagca gttgtatcat gagtgaagaa gcttatgcta gtatagcagg cgatattagc
      121 ccaaaagatt ttagtcttaa agctcaccaa gatattttta aagcggttat agcttgtagc
      181 aataacaaag agcccatttc tgtaagtttt ttaagaaaac ataaaaaaat agatgagcaa
      241 attttagcag aaattcttgc tactccttct atgatagatt tgcctgctta tgtaaatgaa
      301 cttcgcgaaa agtctgtaaa aagacagctc ttgagttttg cgcatctttt gccaactcgt
      361 atcaatgaag atcgtgctgt aagtgaaatc gcagatgaaa ttggtaaaga aatttttagt
      421 attacaaatc gtgtgaattc tagggatatt aaagatgttg atatggtaat atcagaactt
      481 tttgaagaat ttaaaaagca aaaaacttta gaaaataaag gtattatagg gcttgataca
      541 ggttttgaag gtctaaataa aatgacaaaa ggttttaaag ggggtgaact tataataatc
      601 gctgcgcgtc caggtatggg aaagacaact ctttgtttaa atttcattga taaggtttta
      661 agacaaaaaa aaggcgtggc tttattttct cttgaaatgc ctgcaactca aatcatgcaa
      721 agaatgctat cttctaaaac ttctattcct ttgcaaaaaa ttttaactgc agatttaaac
      781 gatgatgaat gggagcgttt aggagatgct tgcaatgatt atagtcaaaa gaaattatat
      841 atttacgata gtggttatgc aactattgct gatgtaaggg ctattttaag gcgtttaaaa
      901 tctcaagatg aaagtatagg actttgtgtg attgactata tagggcttat gatgagtaat
      961 tcaaatttta atgatagaca tttgcaagtt agtgaaattt caagaggact taagcttttg
     1021 gctagggagc ttgatatgcc tattatcgca ctttcacaac ttaatcgtgg cttagagcaa
     1081 agggcaaata agcgtccttt gatgagtgat ttgcgagaaa gtggagctat agagcaagat
     1141 gcggatgcta ttttgtttgt atatcgcgat gaggtttata gagaacaaga agaaaaagaa
     1201 agagagaata aagctaaagc tgaaggcaaa gcttatcaaa ggctttttat accaaatcct
     1261 atgcaagaaa atgctgaaat tattgttgga aaaaatagaa atggacctgt tggaactata
     1321 gaagttgtat ttttaaaaga aaaatcttgt tttgtagata aacctatagg ctatgaaact
     1381 actgaattta caggctagct ttaataaaat aagtttttaa tattttaaag ttatttttta
     1441 cgacacaacc tgtcgcaagg gtgttttata ctttctttgt tattttaaaa caaggagaga
     1501 aaatgttaaa acaaatcgca tttggtagta tagctcttac agctacagga tatggcataa
     1561 aaaaattata cgaaaaatta tccaagccag aaagaaaatt tgatacacat gctattgttc
     1621 caagctgtaa ggatgtaatc aataccgaag aatacaaact caaaagagag cttgaaatcg
     1681 aacaaaagaa aaattaaatt caagaatttc tttgcgaatg catggagtgt tatagcggct
     1741 tttcaaaata ttttaattct aaggaatttt tagaatttga gcaaaatttt acctctaaaa
     1801 ataatcacaa aacagaattt cttttgtcgt cttataaaga tcaaatgata aaagtgatcg
     1861 actatgctaa aaaatttaaa tgcttgagtg cttttttgga aacacaaagc gaaaaaaatg
     1921 acttagcggt tgtaaaaatg ataagtgaaa gtatggagag aaaaacacag agattttatc
     1981 tgcaaacaaa atttcaaact tttcctcagt atatttttcc ttctgtgtgg agttctccta
     2041 tgtgggataa acaatgggaa taatacttgg aattttaagc cttatagctg gctttgttgc
     2101 catagtgttg atgtgtggtt tgtattttat agcgtttatg gtttttgttg gcatagcgat
     2161 acttattttt ctttctatgc aaccttatcc ttataatata atattttgtg ctatatattt
     2221 aatcacaatt ttagcgctag tgctatggcg taaaacttaa aaatttcact tcccccttga
     2281 ctgggggggg ggatttgata aaatacaaag ttaaaaattt taaaaacaag gagaaaatat
     2341 ggcctacaga tatgataaag atttagaatt cttaaaagaa ttaagcagtc cagaactcga
     2401 ttagcttgta aaaattttaa cccatgataa agacgggaaa gttcgtttta ctgaagagtt
     2461 aaccaataat gatctttata aaaaacatta tccagatcat aaagaatata tcgaactcat
     2521 tttagaagaa tttcaaaaat ttggaggaaa tagtattctt aatatatttc gaggtggtgg
     2581 agtttatata atgaaattct acgcgatgtt gcaaaaaaat ttgatgtaaa atttgatgaa
     2641 aatgaaagca caaactccat agaaacatca cttttatgca aattaataga agaagagtta
     2701 aaaaattctc aagatgaaaa tacattaaga gaacttgtaa atattttcga acttggcatt
     2761 tctaatatta ataaacaaac agttgtaatg ggattgcaat ctcttattaa aataggtgga
     2821 tttaaaagct atcaaattgc agtaatagtt gcaaatcaag ttatgaaagt tttactagga
     2881 agaggtttat ctcttgcggc aaatgcaaca cttacaagag ctttaagtct tttttctggt
     2941 ccggtaggtt ggacaattat gaccacatgg actgcattgg atttagctag cccagcctat
     3001 agggttacta taccagcagt acttcaaatt ataattttaa gactaaaaca caatacaaaa
     3061 aactaaacac aaggaaatgc attaatggaa aatatttgcc aatttatcat agaaaatatt
     3121 gataaaaatt cattaaatac aaaaaaaata aaacttgttt tcaatatgca agagcaagaa
     3181 attacaacaa tttcgaagat atttaaggta tcttcggaac acattattgc tttttatgat
     3241 acctcaacat cctttaatta ttttagcaaa actaccggaa tatgttttac tggcaaagaa
     3301 gttatcttta aaagaaaaga agatgaagtt ttaatgaaaa tcaactatga agatttcaaa
     3361 gaggcaaata aatccttacc tgaaaaaaca acaactcttc aagacatcaa atttcccata
     3421 tcttttcata atcttggaac atcttatctt tcatttgatg atttcaaaaa gaaaaactac
     3481 atagaagaaa atgatgagct tataataaat tttttacaca tcttaacttc aaaaaataac
     3541 atagaaagtt ttaaaaatga aagtatgttt ccacaagcct tagaaaaaac aaacgaaagt
     3601 attaaagaaa actatataa
//
LOCUS       DAPIVO010000095         3609 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.096, whole genome shotgun sequence.
ACCESSION   DAPIVO010000095 DAPIVO010000000
VERSION     DAPIVO010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3609)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3609)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3609
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.096"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..821)
                     /gene="selD"
                     /locus_tag="RJ239_001712"
     CDS             complement(<1..821)
                     /gene="selD"
                     /locus_tag="RJ239_001712"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(771..773),aa:Sec)
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HDV7331809.1"
                     /translation="MQYKNQNLTHFVKAAGUAAKLSPGGLKTILNFMQKTPALLSDIG
                     NNEDASVYQISPDLALVQTLDFITPIVDSAYHFGAIAAANALSDVFAMGAEVINALNI
                     VGFDTCNHDLNILKELLEGANDKVKECNALVVGGHTIESTELFFGLSVTGKVHPSKFI
                     ANNTSKIGDCIILTKPLGTGILSTALKAQMLNQKHLDIMLKNMIELNYKASQIALKFH
                     PSAMSDVTGFGLLGHLKEMLNKNISFEIFESELPFLDGVKEYFNMGLIPAGAYKN"
     gene            complement(831..1403)
                     /gene="yedF"
                     /locus_tag="RJ239_001713"
     CDS             complement(831..1403)
                     /gene="yedF"
                     /locus_tag="RJ239_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HDV7331810.1"
                     /translation="MKIDCRNLSCPQPIVETKNALEKLQENEILEIVLNSIISKNNVV
                     KFLNSLNLNPVVDENAQEFCIKVQKKNFDSSEVNIHDYNVLFLKTDKVGEGELGQNLL
                     VGFLSTLKNLDHAPSKILCVNESVLINVDENHKAHLAMKELENLGIEIISCGACLEFF
                     NKSKELKIGNIGNAYEILNELFGKAKIITL"
     gene            complement(1514..>3609)
                     /gene="ccaA"
                     /locus_tag="RJ239_001714"
     CDS             complement(1514..>3609)
                     /gene="ccaA"
                     /locus_tag="RJ239_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aspartate chemotaxis receptor CcaA"
                     /protein_id="HDV7331811.1"
                     /translation="SLNIGLKLIFSVAAVVVIGLVILISLITKQVSQNITKNTEDILA
                     SITKEYATQTQGIFGEMIALNKSISGTLTEMFRSTSKEDLDIDNITNIITNTFDNSAY
                     SNFTYLYLIDPPEYFKEESKFFNTQSGKFVMLYADEEKDNKGGIKAIQASDEIANLQV
                     VQDILKKAKYGENKVYIGRPIKMNLEGQDFDAVNVAIPIFDRKNQVVGVIGMTLDFSD
                     IATYLLDPKGQKYDGELRVLLNSDGFMAIHPNKNLVLKNLKDINPNKGAQETYKAISE
                     GKNGVFNYIASDGDDSYAAINSFKVQDSSWAVLVTAPKYSVFKPLKKLQLIILGASFI
                     FIFVVLGVVYYCVRKIVASRLPVILSSLESFFRFLNHEKIEPKAIEIRANDELGAMGR
                     IINENIEKIQISLEQDQNAVDESVQTAREIEKGNLTARITKNPINPQLVELKDVLNRM
                     LDVLQSKIGSNMNEINRVFDSYKALDFSTEVFNAKGEVEITTNILGKEIKKMLLASSN
                     FAKDLANQSEELKNSMQKLADGSNAQASSLEQSAAAVEEINSSMQNVSGKTVEVASQA
                     DDIKNIVNVIKDIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRQLAERTGKSLSE
                     IEANINILVQSVNEVAESVKEQTAGITQINDAIAQLETVTKENVEVANVTNNITNEVN
                     QIAAAILEDVNKKRF"
BASE COUNT         1192 a          626 c          444 g         1347 t
ORIGIN      
        1 aaatttttat aagctccagc aggaattaaa cccatattaa aatactcttt tactccatct
       61 aaaaaaggaa gttcactttc aaaaatttca aaagaaatat ttttatttag catttctttt
      121 aaatgtccta aaagtccaaa acctgtaaca tcactcatgg cacttggatg aaatttaaga
      181 gcaatttgac tggctttata atttaactct atcatgtttt taagcattat atctaaatgt
      241 ttttgattta acatttgcgc ctttaaagct gtacttaaaa ttcctgttcc taaaggcttg
      301 gttaaaatga tacaatctcc gattttagaa gtattattag caataaattt actaggatgt
      361 acttttcctg taacactaag tccaaaaaaa agctcggtgc tttctatagt atggccaccc
      421 acgactaaag cattacattc tttaacttta tcatttgcac cttctaaaag ctcttttaag
      481 atgtttaaat catgattgca agtatcaaaa cctactatat ttaaggcatt aattacctct
      541 gcacccatag caaaaacatc gcttaaagca tttgctgcag caatagcacc aaaatgataa
      601 gcactatcta ctataggagt gataaaatca agcgtttgca ccaaagctaa atcggggctg
      661 atttgatata cgcttgcatc ttcattattt ccgatatcac taagtaaagc aggagttttt
      721 tgcatgaaat ttaaaattgt tttaagacca cccgggctta atttcgctgc tcagcctgct
      781 gctttaacaa aatgcgttaa attttgattt ttatattgca gtgtttttcc ttatagagta
      841 atgatttttg ctttaccaaa aagctcgttt aaaatttcat aagcattgcc tatatttcct
      901 attttaagtt ctttgctttt attaaaaaat tctagacaag ctccacaact tatgatctca
      961 atacctaaat tttcaagttc tttcatagct aaatgtgctt tatgattttc atcaacattg
     1021 attaaaacac tttcatttac gcaaagaatt ttacttggag catgatctaa attttttaag
     1081 gtacttaaaa atcctacaag taaattttgt cccaattcac cctcacccac tttgtcggtt
     1141 tttaaaaata aaacattata atcgtgaata tttacttcac tagaatcaaa attctttttt
     1201 tgtactttga tgcaaaactc ttgtgcattt tcatctacaa cagggtttaa atttaaagag
     1261 ttaagaaatt ttacaacatt attttttgaa ataatagaat ttaaaacaat ttctaaaatt
     1321 tcattttctt gaagtttttc aagagcgttt tttgtttcaa ctataggctg aggacaagat
     1381 agattgcgac aatcaatttt cattattttt ccttgatatt agctttgaaa aataatatta
     1441 ttttattact tgttttgtgt ttaaaaattt taaataatat agaaaaaatt taaaagctca
     1501 aaaatgagct tttttaaaat ctttttttat tcacatcttc aagaattgcc gcagcaattt
     1561 gattgacttc atttgttata ttattggtga catttgcaac ttcgacattt tccttagtta
     1621 cagtttcaag ttgtgctata gcatcgttaa tctgtgtgat tcctgctgtt tgttctttta
     1681 cagattctgc tacttcattt acgctttgaa caagtatatt aatatttgcc tcgatttcag
     1741 ataaggattt tcctgttctt tccgcaagct gtcttacctc atctgcaaca actgcaaaac
     1801 cacgcccatg ttctccagca cgtgcagctt caatagctgc atttaaagca agaagattcg
     1861 tttgctcagc gatatcttta atcacattga caatattttt tatatcatca gcttgtgaag
     1921 caacctcaac tgtttttcca cttacatttt gcatagaaga attaatctcc tccacagctg
     1981 cagccgattg ttctaaagaa ctcgcttgtg cattagagcc atcagcaagt ttttgcatag
     2041 aattttttaa ctcttctgac tgattggcta aatctttagc aaaatttgaa gaagccaaaa
     2101 gcatcttttt aatttctttg cctaaaatat tagttgtaat ctcaacttca cctttagcat
     2161 taaatacttc tgtactaaaa tcaagagcct tataactatc aaaaactcta ttaatttcat
     2221 tcatattaga accaatttta ctttgtaaaa catcaagcat cctattaaga acatctttaa
     2281 gttctactaa ttgaggattt ataggatttt tagtaattct tgcagttaaa ttaccctttt
     2341 cgatttctct agcagtttgc accgattcat ctacagcatt ttgatcttgt tctaaagata
     2401 tttgaatctt ttcaatattt tcatttatga ttcttcccat tgctcctagc tcatcattag
     2461 cacgaatttc aatagcctta ggttcaattt tttcatgatt taaaaaacgg aaaaatgatt
     2521 ctaaagaact aagaatcaca ggcaatctag atgcgacaat ttttcttacg caataataaa
     2581 ccactcctaa aacaacaaaa ataaaaataa aagatgcacc aagaataatt aattgtaatt
     2641 tttttaaggg tttaaatact gaatatttag gagcagttac caaaactgcc caagaactat
     2701 cttgcacttt aaaactatta atcgcagcat aagaatcatc accatcagaa gctatatagt
     2761 taaaaactcc attttttcct tcacttatgg ccttataagt ttcttgtgca cctttattag
     2821 gattgatatc ttttaaattt tttaaaacta gatttttatt tggatgtatc gccataaaac
     2881 catctgaatt taaaagaact cttaattcac catcatattt ttgaccttta gggtctaaaa
     2941 gataagtagc aatatctgaa aaatctaaag tcatgcctat gacacctaca acttgatttt
     3001 ttcgatcaaa aataggtata gcaacattta cagcatcaaa atcttgacct tctaaattca
     3061 tcttaatagg acggcctata tatactttat tttccccata ttttgctttt tttaatatat
     3121 cttgcacaac ttgcagatta gctatttcat cactagcttg tattgctttt attccgcctt
     3181 tattatcctt ttcttcatca gcgtaaagca taacaaattt tccactttga gtattaaaaa
     3241 atttactctc ttctttaaag tattctggcg gatcaataag atataaataa gtaaaattag
     3301 aataagcact attatcaaaa gtattggtta taatatttgt tatattgtct atatctaaat
     3361 cttctttaga ggttgatcta aacatttctg ttaaagtacc tgaaatactt ttatttaaag
     3421 cgatcatttc cccaaaaatt ccttgagttt gagtagcata ttctttcgtg atagaagcaa
     3481 gaatatcttc tgtatttttg gtaatatttt gacttacttg ttttgtgatt aatgaaatta
     3541 aaataacaag tccaataaca acaacagctg ccacagaaaa aataagtttt aaacctatat
     3601 ttaaagatt
//
LOCUS       DAPIVO010000096         3577 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.097, whole genome shotgun sequence.
ACCESSION   DAPIVO010000096 DAPIVO010000000
VERSION     DAPIVO010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3577)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3577)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3577
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.097"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..920
                     /gene="rsmH"
                     /locus_tag="RJ239_001715"
     CDS             <1..920
                     /gene="rsmH"
                     /locus_tag="RJ239_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HDV7331812.1"
                     /translation="IPVLLNEVQEIFKNLKTGYFLDCTLGFGGHSEALLKNHPDLKFI
                     ACDQDQQALKFSKKRLKDFRNRITFMQSNFSEVLEKISHKEELRGILADIGVSSFQLD
                     NNERGFSVNSDFLDMRMNQNSKISAYEIINTYTKEQLTSIFKDYGELHDAHFIAEKIC
                     LERSKNPIKSAKELYQIIGKGKQNHRKISKATLAFQAIRIEVNQELKVLKDFLEHLEN
                     LKPKNCILAIISFHSLEDRIVKQFFKKWSKNCICNEKIMRCECGNNHSLGQIITKKAI
                     SASKEELLKNSRSSCAKMRAFYFNNLDNK"
     gene            920..1858
                     /locus_tag="RJ239_001716"
     CDS             920..1858
                     /locus_tag="RJ239_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331813.1"
                     /translation="MLEDDFIKERQNIRQKMLKFSRAINQGKPLDDDLRDEISSDDIL
                     RRRFKKKTPNKFLEELDEEYESKHTKKSNIYLKEDLINVKLEEKQSLAKKIFSKMKER
                     RKEENKKTKKNFLFSRKKANEIKNIQTKTQIQTKSNQATTQTKQEKKELTNSIEKIQK
                     TETKIQKPLIIEKKLDVKNQPNIKKSLENLQKKITPQENKQELPKPSNQAQEKQQNDE
                     DAQKAKNILLEGFSNATKEDRNLNFNHLLFAALLVSFALFLFAPQIYIRNQIYYLSRE
                     IATLRTEESVLNEENKDLKRRLENMRFQNQILDYLE"
     gene            complement(1846..2337)
                     /locus_tag="RJ239_001717"
     CDS             complement(1846..2337)
                     /locus_tag="RJ239_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331814.1"
                     /translation="MKKFKEFSLRFLFKVSEQPVLIKDLLEANALFNDGMLVDPSKLN
                     FNFKILNSYIYYGVFCAVVLLPLLLITHYFLTKLDFHISIVSAVMVTACVFIGYDIFK
                     VYTRKIISKKIIQKAWALHFPYFAYEKYSTMAGEFYKEALKEEIPKANLEQYVLDKII
                     HSK"
     gene            2487..>3577
                     /locus_tag="RJ239_001718"
     CDS             2487..>3577
                     /locus_tag="RJ239_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HDV7331815.1"
                     /translation="MNYYQELKKYLNNNLFTSYSLEIDFPKIYNFNANQKAFRDILTK
                     ITKIYNKNKFIKQNEHQFEDEFISKVLEILGWCFVRQDEKIIQGKLEKPDFLLFSNDK
                     LKSKYENLDKETKKSSNDFTIILESKAYNIEIDNKKVKDNPHFQILRYLGNLKKNYGF
                     LTNGRFWRFYDNSILNSNKVFYEINLEKIIEDQNIEAFAYFYSVFSAFNFTEKEDHLE
                     ITLQNNKLSKIKIEDDLKSIIYGTNGNESLFEFIGSRIYNKTKADLKLIYENSLYFIF
                     RLLFIAYFEDKFEIILEKHKYFKSKISLRTLLENLQEDENSSGGFGELENIFNIYNKG
                     KGNFDMPVFNGGLFDESKTALLSTPKIFN"
BASE COUNT         1550 a          475 c          455 g         1097 t
ORIGIN      
        1 atatcccagt tttacttaat gaagttcaag agatttttaa aaatcttaaa acaggttatt
       61 ttttagactg cactttagga tttggcggac atagtgaagc tttgcttaaa aatcatcctg
      121 atcttaaatt cattgcttgt gatcaagatc aacaagcttt aaaattttct aaaaaacgtc
      181 ttaaagattt tcgcaatagg ataactttta tgcaaagtaa ttttagtgaa gttttagaaa
      241 aaatttcaca taaagaagaa ttaagaggta ttttagcaga cattggagtt tcttcatttc
      301 agcttgataa taacgaaaga ggttttagtg taaattctga ctttttggat atgagaatga
      361 atcaaaactc caaaatatca gcttatgaga ttattaatac ttatacaaaa gagcaattaa
      421 cttccatttt taaagattat ggagaattac atgatgcaca ttttattgct gaaaaaattt
      481 gcctagaaag aagtaaaaat ccaatcaaaa gcgccaaaga gctttatcaa atcataggaa
      541 aaggtaaaca aaatcataga aaaatttcca aagctacttt agcatttcaa gccattagaa
      601 tagaagtaaa tcaagaactt aaagtgctta aagattttct tgaacattta gaaaatttaa
      661 aaccaaaaaa ttgcatttta gctatcatta gctttcattc tttagaagat agaatagtaa
      721 aacaattttt caaaaaatgg tcaaaaaact gcatttgtaa tgaaaaaata atgcgttgcg
      781 aatgtggaaa taaccatagc ctaggacaaa taataactaa aaaagctata agtgcgagca
      841 aggaagaact tttaaaaaat tctcgctcta gttgtgctaa aatgcgggct ttttatttta
      901 ataatttgga caataaataa tgctagaaga tgattttata aaagaacgcc aaaacatacg
      961 ccaaaaaatg ctgaaatttt ctcgcgccat aaatcaaggc aaaccgcttg atgatgattt
     1021 aagagatgaa atttctagcg atgatatttt aagacgtcgt tttaaaaaaa agactcctaa
     1081 taaattctta gaagaactcg atgaagagta tgagtcaaaa catactaaaa aatcaaatat
     1141 atatttaaaa gaagatctaa tcaatgttaa attagaagaa aagcaatctc ttgctaaaaa
     1201 aattttttcc aaaatgaaag aaagaagaaa agaagaaaat aaaaaaacta aaaaaaattt
     1261 tttatttagc agaaaaaaag caaacgaaat aaaaaatatc caaaccaaaa cacaaattca
     1321 aacaaaaagc aatcaagcta ccactcaaac aaaacaagaa aaaaaggaac ttacaaattc
     1381 tatagaaaaa attcaaaaaa cagaaactaa aatacaaaaa cctctaatta tagaaaaaaa
     1441 actagatgtt aaaaatcaac ctaatatcaa gaaaagttta gaaaatttac aaaaaaaaat
     1501 aacaccacaa gaaaataaac aagaacttcc aaaaccatct aatcaagctc aagaaaaaca
     1561 acaaaatgat gaagatgctc aaaaggcaaa aaatatttta ctagaaggct tctctaatgc
     1621 taccaaagaa gatagaaacc taaacttcaa tcatcttctt tttgcagctt tacttgttag
     1681 ttttgcatta tttttatttg ccccacaaat ttatattaga aatcaaattt attatcttag
     1741 tagagagatt gctacattaa gaacagaaga aagtgtttta aacgaggaaa ataaagactt
     1801 aaaaagaaga cttgaaaata tgcgattcca aaatcaaatt ttagattatt tagaatgaat
     1861 aatcttatct aaaacatact gctctaaatt tgcttttgga atttcttctt ttaaagcttc
     1921 tttataaaat tcacccgcca ttgtagagta cttttcataa gcaaaataag gaaagtgtaa
     1981 agcccaggct ttttgtatta ttttttttga gattattttg cgagtataaa ctttaaaaat
     2041 atcatatcct ataaatacac aagcagtaac cataacagca ctcactatgc ttatatgaaa
     2101 gtcaagtttt gttaaaaaat aatgagtaat taaaagcaat ggcaacaaaa ccacagcaca
     2161 aaaaacacca taataaatat aagaatttag aattttgaaa ttaaaattta gcttagaggg
     2221 atctacaagc ataccgtcat taaaaagtgc atttgcttct aataaatctt ttataagaac
     2281 aggttgttct gatactttaa ataaaaaacg aaggctaaat tctttaaatt ttttcataat
     2341 ccatgcttta ttttttaatt aaaattttat ccaaagaaaa ttaattccaa ctaaaaaatc
     2401 attttcataa ataagcacaa gtctttaaag ttttttagat ataatttaaa atgtcaaatt
     2461 tttaaaaata ctttagaaag aaagccatga attactatca agaacttaaa aaatacctca
     2521 acaataatct ttttacaagc tattctttag aaattgactt tcctaagatt tataatttca
     2581 acgcaaatca aaaagccttt agagatattt taactaaaat tacaaaaatt tacaacaaaa
     2641 ataaatttat aaaacaaaac gaacatcaat ttgaagatga atttatatca aaagtattag
     2701 aaattttagg gtggtgcttt gtaagacaag atgaaaaaat catacaagga aaattggaaa
     2761 aacctgattt tctacttttt agcaatgaca aattaaaatc aaaatacgaa aatttagaca
     2821 aagaaacaaa aaaatcaagc aatgatttca caatcatttt agagtcaaaa gcttataata
     2881 tagaaataga caataaaaaa gtaaaagaca accctcactt tcaaattcta agatatctag
     2941 gcaatcttaa gaaaaattat ggttttttaa ccaatggtag attttggcgt ttttatgata
     3001 attctatact gaattcaaac aaagtttttt acgaaatcaa tctagaaaaa atcattgaag
     3061 atcaaaatat tgaagctttt gcgtattttt atagtgtgtt tagcgctttt aatttcacag
     3121 aaaaagaaga tcatttagaa ataactctac aaaacaataa actttcaaaa atcaaaatag
     3181 aagatgattt aaaatctatc atttacggaa ccaatggaaa tgaatcttta tttgaattca
     3241 taggctctag aatttacaat aaaacaaagg cggatttaaa actaatctat gaaaattctt
     3301 tatattttat ctttaggctt ttatttattg cttattttga agataaattt gaaattatac
     3361 tagaaaaaca taagtatttt aaaagtaaaa tcagtcttag aaccttactt gaaaatttac
     3421 aagaagatga aaactcaagt ggtggctttg gagaacttga aaatattttc aacatttaca
     3481 acaaaggcaa aggcaatttt gacatgcctg tttttaatgg cggtttgttt gatgagagca
     3541 aaaccgctct tttaagcacg ccaaaaatct ttaacga
//
LOCUS       DAPIVO010000097         3573 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.098, whole genome shotgun sequence.
ACCESSION   DAPIVO010000097 DAPIVO010000000
VERSION     DAPIVO010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3573)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3573)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3573
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.098"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            48..614
                     /locus_tag="RJ239_001719"
     CDS             48..614
                     /locus_tag="RJ239_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005219660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDV7331816.1"
                     /translation="MVENKQEFLRDTVVFSNAMKKLKKHLEWNYYSVFREWHYKDIEP
                     RVFAEELLLGENKKPADTYKFHIFDKENLSNNFIQVTTDRFDNYQRAMFDLSWNLAPF
                     NFMYDNKNVTMIPKKPNLLDSMINISLILAKPFDYVRVDLYQFDKKIYIGELTFTHGA
                     AGEKVIPKEWDKKLGDLWRLKRLDNASK"
     gene            601..1704
                     /locus_tag="RJ239_001720"
     CDS             601..1704
                     /locus_tag="RJ239_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate aminotransferase family
                     protein"
                     /protein_id="HDV7331817.1"
                     /translation="MQANKNIQKLTPYLSIPHKIWNSSQSNILKLDWNEATIPPSPYV
                     IESIKKFLVNGNLNWYPNTKNLYLLDKIAEYTKQINSSFVELFEGSDSAHECIIDVFL
                     DKCDKIGIVSPTYDNFRSRANGVGIETISFTLDDNFNLDFDSLEYFIHEKRIKLLYLC
                     NPNNPTGKSYNIQKIKSLIINNPNVMFIIDEAYYEFTSQSVCDLVEQCNNLIITRTFS
                     KAFALASFRIGYIISHPENIESINKLRNPKSVPMLSQIAANAALEDLQYMRDYVDEVS
                     CARMEFVKFLNTLTTGGGGIFNDSVANFVLIQNENISLFVGFLEKEGIFIRNYSHLIS
                     KNCRISIGTRNQMSYVAEKIQEFAKKQGGFHLV"
     gene            1754..2926
                     /locus_tag="RJ239_001721"
     CDS             1754..2926
                     /locus_tag="RJ239_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate aminotransferase family
                     protein"
                     /protein_id="HDV7331818.1"
                     /translation="MLIKLNDYEKNITQKIKDLKNASGSHSPSIFTMAEQIPELNIKI
                     DSCFLSNPYATALFLRYLKEELIDGQKLRSVLEFYPSQNSIIAKTVADFIGIDPKNVF
                     IGNGAIEIIQAVMHNFVGKKIIVNIPTFSSYYEFAKSETNVVYYQLSKEDNYNLNIEH
                     YLNFVKNENPDSVVLINPNNPDGGYINYEKLRYILSELKYVKNIIIDESFIHFAYENK
                     DYNGINIEYLFKEFHNTIIIKSMSKDFGVAGIRIGYAIMSEDKIRGLLKNGYLWNSSG
                     LSEYFLRLYVRKNFFDEYDKVRREYIQETQTFFRKLSGIKQFKVYPSMANFALVELLD
                     GSSSTDFVAKMLIKYGIYMRTCNDKIGLEGEFIRIASRTLEENDMVLKSICDVFKE"
     gene            2930..3565
                     /locus_tag="RJ239_001722"
     CDS             2930..3565
                     /locus_tag="RJ239_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IB family hydrolase"
                     /protein_id="HDV7331819.1"
                     /translation="MSKEILALFDFCETLTNFQTLDRYLPLAGSKNINYTQSKNLARR
                     ERFQRENLPYPRYEWLIDLDVDLAEEIAQEFVYTDVMANLNQNVMDRLFWHQDEGHTI
                     VIVSGGLTIYIKEFARIYNIENIVAVDLEIYKNKLTGNIDGIHTMQERKLYKLAQKFN
                     LKQFDLKNSYAYSDCVSDIPLLSLVGNPNVIECGKDLQWARILGFNILLKY"
BASE COUNT         1296 a          360 c          615 g         1302 t
ORIGIN      
        1 ctaattcttt tgttttaaaa actaatcatg attgtggagg ttatgttata gttgaaaata
       61 aacaagaatt tttacgagat actgttgttt tttcaaatgc tatgaaaaaa ttaaaaaaac
      121 atttggaatg gaattattat agtgtattta gagaatggca ttataaggat atagagccta
      181 gagtctttgc agaagaatta ttgttgggag aaaataagaa accagcagat acatataaat
      241 ttcatatttt tgacaaagaa aatttatcta acaattttat acaagttaca acagacagat
      301 ttgataatta tcaaagggct atgtttgatt tatcatggaa tttagcacct tttaatttta
      361 tgtatgataa taaaaatgtt acaatgattc ctaaaaaacc taatcttttg gattctatga
      421 taaatatttc tttgattctt gcaaaacctt ttgattatgt tagagtcgat ttatatcagt
      481 ttgataagaa aatttatatt ggggaattaa cttttactca tggtgcagct ggtgaaaaag
      541 ttattcctaa agagtgggat aagaaattgg gggatttgtg gcgtttgaaa aggttggata
      601 atgcaagcaa ataaaaatat tcaaaaactt actccttatt tatctattcc acacaaaata
      661 tggaattcga gtcaatcaaa tattttgaaa cttgattgga atgaggctac gattccgcca
      721 tctccttatg ttatagaaag cattaaaaaa tttttagtta atggaaattt aaactggtat
      781 ccgaatacaa aaaatttata tttattggat aaaatagcag aatataccaa acagataaat
      841 agttcttttg ttgagttgtt tgaaggatcc gattctgctc atgaatgcat catcgatgtg
      901 tttttagata aatgtgataa aatcggaatt gtttccccta cttatgataa ttttagatct
      961 agagctaatg gggtaggtat tgaaactatt tcatttacac ttgatgataa ttttaattta
     1021 gattttgata gtttagaata ttttatacat gaaaagagaa taaaactttt atatttatgt
     1081 aatccgaata atccaaccgg gaaatcttat aatattcaaa aaattaagtc tctaattatt
     1141 aataatccta atgtaatgtt tattattgat gaagcctatt atgaatttac tagccagagt
     1201 gtatgtgatt tggttgaaca atgtaataat ttaattataa ctcgaacatt ttctaaggct
     1261 tttgcattgg cgagttttag gataggatat ataatttcac atccagaaaa tatagaatca
     1321 ataaataaat taagaaatcc aaaaagtgtt cctatgctat ctcaaattgc agctaatgca
     1381 gcattggagg atttacaata tatgagagat tatgtagatg aagtgagttg tgctaggatg
     1441 gaatttgtga aatttttgaa taccttaact actggcgggg gggggatatt caatgattct
     1501 gtagcaaatt tcgttttgat tcaaaatgag aatatatctc tttttgtagg gtttttggaa
     1561 aaagagggta tttttattcg caactattct catcttattt ctaaaaattg tcgtattagt
     1621 ataggtacaa gaaatcaaat gagttatgtt gctgaaaaaa tacaagaatt tgctaaaaaa
     1681 caaggaggtt ttcaccttgt ttgatgcaat tatagtaaga attattttta cttttgtatt
     1741 cttcaaggat ttgatgttga taaaacttaa tgattatgaa aaaaatatta cgcaaaagat
     1801 aaaagatttg aaaaatgctt ctggtagtca tagtccgagt atttttacca tggctgagca
     1861 aataccggaa ttaaatataa aaattgattc ttgtttttta tctaatccct atgcgacagc
     1921 tcttttttta agatatttaa aagaggagtt aatagatggt caaaaactaa ggtcagtttt
     1981 ggaattttat ccttctcaaa atagtataat tgccaaaact gttgcagatt ttataggaat
     2041 tgatcctaaa aatgttttta ttggaaatgg tgctatagag attattcaag ctgtaatgca
     2101 taattttgta ggtaaaaaga tcattgttaa tattcctact ttttcatctt attatgaatt
     2161 tgctaagtct gaaacaaatg ttgtttatta tcaactttct aaagaagata attataactt
     2221 gaatatagaa cactatctta actttgttaa aaatgaaaat ccagatagtg tagttttaat
     2281 aaatcctaat aatccggatg gaggatatat taactatgag aaattaagat acattttaag
     2341 tgaattgaaa tatgttaaaa atattattat tgatgagtcc tttattcatt ttgcttatga
     2401 aaataaggat tataatggga ttaatattga gtatcttttt aaagaatttc ataatactat
     2461 tattatcaaa agtatgtcta aagattttgg cgtagcaggg attagaatag gttatgcaat
     2521 tatgtcagaa gataagataa gaggtttatt gaaaaatgga tatttgtgga attcttcggg
     2581 acttagtgaa tattttttaa gattatatgt aagaaaaaac ttttttgatg aatatgacaa
     2641 ggttagaagg gaatatatac aagaaactca gacttttttt agaaagttaa gtggaattaa
     2701 acaatttaag gtttatccta gtatggctaa ttttgctctt gtggagcttt tggatggtag
     2761 ttctagtaca gattttgttg ctaaaatgct gattaaatat ggtatttata tgagaacttg
     2821 caatgataag ataggtttag aaggagaatt tattagaatt gcaagtcgaa ctttagagga
     2881 gaatgatatg gtattaaaat caatttgtga tgtttttaag gaataaaata tgtctaagga
     2941 aattttggcc ttatttgatt tttgtgaaac tttaactaat tttcaaacgc ttgatagata
     3001 tttgccttta gctggatcta aaaatattaa ttatacgcaa agtaaaaatt tagcaagaag
     3061 agaaaggttt caaagagaaa accttcctta tcctcgttat gaatggttaa ttgatctcga
     3121 tgttgatttg gcagaagaaa ttgctcaaga gtttgtttat actgatgtga tggcaaatct
     3181 taatcaaaat gttatggata gacttttttg gcatcaagat gaaggccaca caatcgttat
     3241 agtatcaggt ggtcttacga tttatattaa agaatttgct agaatttata atattgagaa
     3301 tattgtggcc gtagatcttg aaatttataa gaataaatta actggaaata tagatggaat
     3361 tcataccatg caagaaagaa aactttacaa attagctcaa aaatttaact taaaacaatt
     3421 tgatttaaaa aattcttatg cgtatagtga ttgtgtaagc gatatacctt tattatcatt
     3481 agttggaaat ccaaatgtta ttgaatgtgg taaagattta caatgggcta gaattttagg
     3541 ttttaatatt ttgttgaagt attaaattat aaa
//
LOCUS       DAPIVO010000098         3327 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.099, whole genome shotgun sequence.
ACCESSION   DAPIVO010000098 DAPIVO010000000
VERSION     DAPIVO010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3327)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3327)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3327
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.099"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            210..908
                     /locus_tag="RJ239_001723"
     CDS             210..908
                     /locus_tag="RJ239_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDV7331820.1"
                     /translation="MKTFISNHKNQSSFITLFVFTPLFFVFLYSKDFLHIQPNEIIKE
                     NKFNMAIKHFVQNSSDMKPTQPTQTIQEPSNVQPKEPVQEIKKIKPRKEKPIAKPKKI
                     IPPANAKAISQPKKDTNMQQPIMQQQTPQASSYQSVSLTSNSELLKEIKSAIDEALIY
                     PRQARKMRMSGEVLVEFTWTKEKKLENLKILKPSKYDFLNKSALETIRIASKKFPQYE
                     KTFHIKIPLVYKLS"
     gene            complement(1000..1437)
                     /locus_tag="RJ239_001724"
     CDS             complement(1000..1437)
                     /locus_tag="RJ239_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDV7331821.1"
                     /translation="MKKDSYHKITSKLIQEFDLLAVEDLQIKNMCKRAKLKNIKAKSG
                     LNKSILNTSFYQFSQYLEYKAKHNGKFFIKVNPQYTSKTCSVCGNIKKNLMFKDRVYL
                     CEKCGNTLHRDINAANNILKRGLKSFGLGISLEDYKLKAFRIS"
     gene            complement(1558..1821)
                     /locus_tag="RJ239_001725"
     CDS             complement(1558..1821)
                     /locus_tag="RJ239_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002890613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDV7331822.1"
                     /translation="MNTFFKMRYHRDLPNTYKFNQITIIKNHNKYYLAFSIIYDESNV
                     SLMSSKDFDIKKAVDIDLNINEITLSSGELIATNSKLLSRAEY"
     gene            complement(2250..2342)
                     /locus_tag="RJ239_001726"
     CDS             complement(2250..2342)
                     /locus_tag="RJ239_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331823.1"
                     /translation="MLETLKKYAENQGIEDNYPKKIYNQKEKKP"
BASE COUNT         1283 a          541 c          358 g         1145 t
ORIGIN      
        1 tcttgctata attcttaaaa atataagttt ttttagagaa gtaaatagca aaaattaaat
       61 atcttttaga tacaagcttg attatttgat tgttattttt ctctgtgaaa tttgtttcaa
      121 aatttatctt tttaaacaat ttaccataga atgtgtttta agaaataaag atatttaaat
      181 caaaaaataa aatcataacg gagtaaaaga tgaaaacatt tataagcaat cataaaaacc
      241 aatcttcttt tatcacttta tttgttttta cacctttatt ttttgttttt ctttattcta
      301 aagatttttt acacatacaa cccaatgaaa ttattaaaga aaataaattt aatatggcaa
      361 tcaaacattt tgtacaaaat tcctccgata tgaaaccgac acaacccaca caaactatac
      421 aagagccttc gaatgtgcaa cccaaagaac ctgtgcaaga aataaaaaaa ataaaaccga
      481 gaaaagaaaa acctatcgct aaacctaaaa aaataatccc tccagcaaat gcaaaggcaa
      541 taagtcaacc caaaaaagat acaaacatgc agcaaccaat catgcagcaa caaactccac
      601 aagccagctc ttaccaaagc gtatctttaa ctagtaatag tgagctttta aaagaaataa
      661 aatcagcaat cgatgaagcc ctaatctacc ctagacaagc tagaaaaatg cgtatgagtg
      721 gggaggttct tgtagaattt acctggacaa aagaaaagaa attagaaaat ttaaaaatac
      781 ttaagccttc aaaatatgat tttctaaata aaagtgcttt agaaactata cgcatagctt
      841 ctaaaaaatt tccacaatat gaaaaaactt ttcatataaa aataccattg gtatataaat
      901 taagctaaat ctttcacaat atactctatt tttaatgcaa atcactccag ctttgctaac
      961 gcttagaagt agaagcttcc tagctaaagc taactagtat tagctaattc gaaaggcttt
     1021 gagtttatag tcctcaaggc taattcctaa cccaaacgac tttaatccac gctttaagat
     1081 attatttgca gcattaatat ctctatgtaa agtgttgcca catttttcac aaagatacac
     1141 tctatcttta aacataagat tttttttgat atttccacat acactacaag ttttgcttgt
     1201 atattgtgga ttgactttta taaagaattt gccattatgc tttgctttat actctagata
     1261 ttgagagaat tgatagaatg aagtattaag aatagattta tttaaaccac ttttagcttt
     1321 tatattcttt aatttagctc ttttacacat attcttaatt tgcaaatctt caactgctag
     1381 caagtcaaat tcttgtatga gttttgaagt tatcttgtga taactatcct ttttgatttt
     1441 gaactttttt catagatttt atttaatttt aattgtgttt ttttgaaatt atggcttaac
     1501 tttgttttct ccttttttgt ttttaatatt ctcctgcttt gttttctttg caatctttta
     1561 atattcagct ctactaagta gctttgagtt agtagctatt aactctccac tgcttaaggt
     1621 aatctcattg atatttaaat caatgtcaac tgctttttta atatcaaaat ctttgctaga
     1681 cattaaagaa acattcgatt catcataaat gatactaaaa gctaaatagt atttattgtg
     1741 atttttgata atagtgattt gattaaactt ataagtattt ggtaaatctc tgtgataacg
     1801 cattttaaaa aatgtattca taagtctaaa tatcttaaac ttagtagtat cactatcttt
     1861 gattttgtag gcttgattat tccaattaaa gctttgcttt gcaaatttag agtttttaaa
     1921 tttgagaaag cctttgtttt tatctctaat tgcttgctct aaggcacgag aagattaatc
     1981 cttgcttgtt gggttacaac acttttatag cttaattctc ttgcttttat aaggctagtt
     2041 ttattgatta tctatcttac ttgcctttaa ataactccta tcttttttat ctaaattctt
     2101 atttttatcc cactctcttg ctgtaaattt aaacaaatat tataggcttg atatagatga
     2161 aacattgatg attaataagc ttttgttgtt ctttgtttag gtagaattct atatttaaaa
     2221 cctttggtta tttgcattgc tttgttccat tagggctttt tttctttttg gttatatatt
     2281 tttttagggt aattatcttc tatgccttga ttttctgcat attttttaag agtttctagc
     2341 attattccgc ataggtattc tataaaaaat tactgattat gtcaaatacc taactagagc
     2401 cgtacaacta acactgtaag caattcatct cccacttaag aagtgagagt tttattgaat
     2461 aaaaaaagat aaatttaaag caagtaatct ttttttagac aacactaaac ccttgcatgt
     2521 atttacagca atatttattt catcataaac aacccccaac ccataaaacc ttcaataaac
     2581 actataaaat aaaagtattt gtaaagaaca agcaaacaat aaatctcaat cacccagaca
     2641 aaaacaatct caaccgaccc ataaagcaat aaatcaagca agcataatta atttaattga
     2701 ttaaactaat aaatttaatt tataagatta acaataaaaa accataaatt aaccaagcta
     2761 atcccaccca aacccaaaca agccataaat tacacacact tttttacaaa catcaattaa
     2821 atagcaagac tatcgataat aaaaaattta tctcaagtat aacattcatt ctcgccaaca
     2881 agaatagaca atcatagtct atccacccta acccaacatt aacccctaac ccaactaaga
     2941 agtgtataac aaccccaacc cataaacctc aataaacact ataaaataaa cttgagtgat
     3001 taaaaatcca acccaattat tgaacaaacc caacctacat aataaaatat aaactagaca
     3061 tataaagaac aattgacaca taaaaataga ttgaataaat aaacctatac aagtaaacat
     3121 aaagattaat tattgataca aaagattcaa taaataaata aaaagaataa ttgagatata
     3181 aaaacatata aactaaacaa ctcaaacaac cattaaatca acccaagcta attaaaccta
     3241 taaacataaa aaaataatta aatataaaaa caacgattga cgtataaaaa ctaagatttt
     3301 aaatctataa gaataagata aagtaga
//
LOCUS       DAPIVO010000099         3295 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.100, whole genome shotgun sequence.
ACCESSION   DAPIVO010000099 DAPIVO010000000
VERSION     DAPIVO010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3295)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3295)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3295
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.100"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            7..339
                     /locus_tag="RJ239_001727"
     CDS             7..339
                     /locus_tag="RJ239_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV7331824.1"
                     /translation="MKKYHSLCPIETTLNLIGNKWKILIIRDLLQGTKRFGELRKSIS
                     FTKNQNISQNVLTQNLRELEEAKLIKRKVYAEVPPKVEYSLTSLGNSLESILKSLENW
                     GNSYKNIV"
     gene            426..1372
                     /gene="arsP"
                     /locus_tag="RJ239_001728"
                     /pseudo
     CDS             426..1372
                     /gene="arsP"
                     /locus_tag="RJ239_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_129557825.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="organoarsenical efflux permease ArsP"
     gene            1382..1705
                     /locus_tag="RJ239_001729"
     CDS             1382..1705
                     /locus_tag="RJ239_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002906233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HDV7331825.1"
                     /translation="MQKFLAIISAINDESRILILYHLLRYKELCVCDLQELLNMGQSR
                     LSRHLKILKDAGFLYVRRQGTWAYYGINNELLKLHLDLFENIKNLELKNVIKKNENII
                     TQICP"
     gene            complement(1713..2144)
                     /locus_tag="RJ239_001730"
     CDS             complement(1713..2144)
                     /locus_tag="RJ239_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDV7331826.1"
                     /translation="MAYTIKKVEKETKISAHTLRFWAKKGLFPFVQKDENSVKYFSKS
                     DIEWVKWIEWLRISGMPIEQIKHYIKLCSLGIKTAKERQEMLKQTKKKLQNQIKTLKE
                     SEKVLSKKIKIYEEMLANEVDGFNPESKDYQPCDKLHKFKG"
     gene            2224..>3295
                     /locus_tag="RJ239_001731"
     CDS             2224..>3295
                     /locus_tag="RJ239_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HDV7331827.1"
                     /translation="MLKITKIKRKIMNSIKIKLSLIANLIAIFALIVLGIVSFYFTKT
                     SLYESTLKNQTDLLKVTQSTVEDFRSTNQSFTRALEKDIANLPYQSLITEENIINNVG
                     PILKYYHHSINALNVYLGLNNGKVLLSQKSNDAKMPELRDDLDIKTKDWYQEALKTND
                     IFVTPAYLDTVLKQYVITYSKAIYKDGKIIGVLGVDIPSEDLQNLVAKTPGNTFLFDQ
                     KNKIFAATNKELLNPSIDHSPVLNAYKLNGDNNFFSYKLNNEERLGACTKVFAYTACI
                     TESADIINKPIYKAAFIQAIVVIIVVVFSVILLYFIVSKYLSPLAAIQTGLTSFFDFI
                     NYKTKNVSTIEVKSNDEFGQISN"
BASE COUNT         1158 a          454 c          418 g         1265 t
ORIGIN      
        1 tttataatga aaaaatatca ttctctttgt cctattgaaa ccacgcttaa tttgatagga
       61 aataaatgga aaattttaat tattcgagat ttgttgcaag ggactaaaag atttggagag
      121 ttaagaaaaa gcatttcatt tacaaaaaat caaaacatct ctcaaaatgt ccttacacaa
      181 aatttacgag aattagaaga agcaaaactg atcaaacgca aagtttatgc agaagttcct
      241 ccaaaggttg agtactcact tacatcttta ggcaatagtt tagaatccat cttaaaaagt
      301 cttgagaatt ggggaaatag ctataaaaat atcgtttaag taataaatta atatatcaat
      361 atatatatta atttattaat ttatacatgt tatatttttt ggaaatattt ttaaaaggat
      421 aaaaaatgca gtctttttta aatactttca aagagttttt atatctattt actgagcttt
      481 ctgtactttt tatagctatt tcttttttag tttctattat caatcaaaaa tacgaaggaa
      541 tttttaaaaa caacttgctg gtgacaaaat ttcaagttat tttaaagcta tatttttagg
      601 tgctttaacg ccattttgtt cctgttctac cataccgctt ttaagagctt ttttagaagc
      661 gaaagtaaaa cttagcatag ctttagctta tctttttact tcgcctctta ttaatcctat
      721 tattttttcc atgctttttg taacttttgg tttaaagtta agtttgattt atgtggtttt
      781 tttgatattt ttgatattta ttatttcttt tgttttttct aaatttaagg aagatagttt
      841 tttaaaacat attcctaaaa atacaaaatc aagtattttt acccaaagcg ctcacaatcc
      901 tagcaatttt atttttaaac aaaaatcatg ctgtgcaaat actcaagata agtctaaaaa
      961 tataacgata aactataaag aattattcaa agaaagtttg aaaaattata aaaaattatt
     1021 accttatatc gttgtggcag tttttatcgg tgcttttatt catggtttta ttcctcaaga
     1081 aattttacaa aaatacctaa atggcaatga aattttaagc attgcattag cggctttttt
     1141 aggaattttc ctttatttaa gagtagaaac tattattcct ataggcttag cacttttaca
     1201 aatgggaatt tctcaaggag tgattatgag ttttttaatc gctggtgctg gatgttcttt
     1261 acctgagctt gttttactca aacaaatgtt taaaatgaaa tttttatttt tatttgttat
     1321 gattatttta ggcgtggcta tatcttttgg aatttttatt aatttaattt aaggaaataa
     1381 aatgcaaaaa tttttagcca ttatttcagc aatcaatgat gaaagtagga ttttgatttt
     1441 gtatcatctt ttaagataca aagaactttg tgtttgtgat ctacaagagc tcttaaacat
     1501 gggtcaatca agactttcaa gacatttaaa aattttaaaa gatgcaggtt ttttgtatgt
     1561 aaggcgtcaa ggaacttggg cgtattatgg gattaataat gagcttttaa agctgcattt
     1621 agatcttttt gaaaatatca aaaatttaga gcttaaaaat gttattaaaa aaaatgaaaa
     1681 tattattacc caaatttgcc cttaatataa aatcaaccct taaacttatg caatttatca
     1741 caaggttgat agtccttgct ttctggatta aacccatcga cttcatttgc aagcatttct
     1801 tcataaattt ttatcttttt gcttaaaact ttttcacttt cttttaatgt tttaatctgg
     1861 ttttgtaatt ttttctttgt ttgctttaac atctcttgtc tttctttagc agtttttata
     1921 cccaaagagc aaagttttat ataatgtttg atttgttcta ttggcatacc tgaaattcta
     1981 agccattcta tccattttac ccattctata tcgctttttg aaaaatattt cacactattt
     2041 tcatcttttt gaacaaaagg aaacaaacct tttttagccc aaaatcttaa agtatgagca
     2101 ctaatttttg tttctttttc tacttttttt atagtataag ccatattttc tcctttattt
     2161 aagataaaaa taaaaattta ttttattttt ttgtgataaa ataatagcca aattattagt
     2221 tttatgctaa aaataacaaa gattaaaagg aaaataatga atagtattaa aatcaaactt
     2281 tccctcattg caaatttaat tgcaattttt gccttaattg ttctaggtat tgtaagtttt
     2341 tattttacaa aaacctcact atatgaaagc actcttaaaa atcaaactga cctacttaaa
     2401 gtcacacaat ctaccgttga agatttccgt tccacaaatc aatcttttac tagagcttta
     2461 gaaaaagata tcgcgaactt accttatcaa tctttaatca ctgaagaaaa tattattaac
     2521 aatgttggtc caatattgaa atattatcat catagtataa atgcactaaa tgtttattta
     2581 ggtttaaaca atggaaaagt tttacttagt caaaaatcta atgatgcaaa aatgcctgaa
     2641 ttacgtgatg atttagatat aaagacaaaa gattggtatc aagaagcttt aaaaacaaat
     2701 gatatttttg ttacaccagc atatttagat acagttttaa aacaatatgt aataacgtat
     2761 tctaaagcta tttataaaga tggtaaaatc ataggggtac tgggtgtcga tataccatca
     2821 gaagatttgc aaaatttagt tgcaaaaacc cctggaaata cttttttatt tgatcaaaaa
     2881 aataaaatat ttgcagcaac caataaagaa ttattaaatc catccattga tcattctcct
     2941 gttctaaatg catataaact caatggtgat aacaacttct tctcttataa gttaaataat
     3001 gaagaaagac ttggagcttg tactaaagtc tttgcttata cagcttgtat taccgaaagc
     3061 gctgatatta taaataaacc tatttataaa gctgcattta ttcaagccat tgttgtcatt
     3121 attgtagtag tatttagcgt catcctcctt tatttcatcg tatcaaaata cctctcccca
     3181 cttgcagcta tccaaacagg tttaacttca ttctttgatt ttatcaacta taaaacaaaa
     3241 aatgtttcta ctatagaagt aaaaagcaat gatgaatttg gacaaatctc aaatg
//
LOCUS       DAPIVO010000100         3007 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.101, whole genome shotgun sequence.
ACCESSION   DAPIVO010000100 DAPIVO010000000
VERSION     DAPIVO010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3007)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3007)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3007
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.101"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            30..2873
                     /locus_tag="RJ239_001732"
                     /pseudo
     CDS             30..2873
                     /locus_tag="RJ239_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343503.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent DNA methyltransferase"
BASE COUNT         1202 a          443 c          444 g          918 t
ORIGIN      
        1 atacaaaata ttttttataa aggttaaaaa tgcatttcac tttgctaaat gaaaaagatt
       61 ttttcaaccc atactaccgc aaaaagcaaa tcatgcaaaa tgaatttgat atatttaaca
      121 aggctttaat gcaatatcta gaaagacttg aaagttcgca aagtgaaaat gaagattatc
      181 ttgtagctaa tgcacttagt ccatttttaa ccatgttaaa tttcaaaact cacatcaaaa
      241 ccaagcaaaa aggcaaaagt gagatcgact tatccatgtc taaagatgag tttagtaaag
      301 acttagaagt tcttattgag gctaaaaagc caaattcaaa agaatttatc actcatacaa
      361 aggtaaattc taaagcctta cacgagacta ttttatatta ttttagaaat agagagtata
      421 gttttagctt aaaatttatt atcatcacag atttttataa attttacatt tttaaaatta
      481 gtgagtttga agagcttttt tataaaaatc caagttttaa aaaacttttt gaagaatttt
      541 gtaatccaaa ttcacttttc aaaggtaata ctgaagaatt ctataaagaa gtagccaaac
      601 tcatagaaaa ttccaaagaa aacttaaaag gctttttgat tgacttgacg tttttaaaag
      661 acaaacaaaa atcaaatttt aaaaagctag caagtatttt taaaactttt catagagact
      721 ttttgctaag tgagtttaac cccaacgatg caaattcact caacaacgct ttttacaaag
      781 agcttttata catcttaggg ctttatgaga gcaaacaaaa ctcaaaactc atcatcacaa
      841 aaagcgaaga aagtaaagaa gagcaaggaa ctttctacac cgctataaac tctaagctca
      901 aagaagaaaa ttttgaaacc atcttaaagc ttttgatctt atggcttaat cgcattttgt
      961 ttttaaagct tatagagtca aatttggtgc gttttaatga tgataaaaat ttgaaatttt
     1021 taaatttcaa aaaaatccct gattttgaca agcttagcga acttttcttt gaagtcttag
     1081 ccaaagaaaa aagcacgcga aagaaaagcg aatttgctta tctgccttat ttaaattctt
     1141 ctttgtttga aaaacaaagc atagaaaaca cgcttgaaat ttcaagctta agcaatgact
     1201 taaagctttt ttactataaa aacaccgtgc taaaagatga taaatgcaag gctaaaaaag
     1261 gacaagtggg gcttttagaa tacttgtttg aatttttgga tagttttgat tttggtagcg
     1321 atgatgagca aagcgaaatt ttaagccaaa aagaactcat aagttcaagt gttttaggaa
     1381 atgtgtttga aaaactcaat ggctacaaag aaggaagctt ttacacgcca agctttatca
     1441 cttcttatat gtgtaaagaa agcatcacaa aagttgtgct tgataaattc aacgctcaat
     1501 ttgatcttga tgctaaagat ataagcgagt taagaagatc tttaagaaaa gaagacaaaa
     1561 aagcacaaaa agagctttta aactctataa aaatttgcga tcctgcggtg ggaagcgggc
     1621 attttttggt ttctgcttta aatgttatgt taagcattta tgatgagcta aatctttttg
     1681 atgaagaatt ttatctagaa gtgcaaaacg atgaaattct catcacgggt agaaaaggcg
     1741 agtttataga gtataaacgc ccaagtacgc ctaaagataa agcccatctt atccagcaag
     1801 aactttttca taccaaaaaa gacatcatag aaaacaacct ttttggagtc gatatcaacc
     1861 ctaactcatg cgagatcacc aagctaaggc tttggataga gcttttaaaa catagctttt
     1921 atcaaagctt tgatgatgag aattatcacg atcttaaaac cctgccaaac atcgatataa
     1981 acataaaatg cggaaattct ttggtatctt actttgaaac aggcaaaagc ctaaaccact
     2041 atcctaacat caaagaacgc attaacaaat acaaacgcat agtaaaagac tataaagaag
     2101 gcttttacac agataaaagc cacatcaacc aagagataaa aaatctcaaa atttctttta
     2161 aaaatttctg ttttgcagat aaatttaaaa aagaaatgaa aggctttaat gataaatgcg
     2221 aaaaatactc taaaaaatac ggaaatttct tagctataaa tgatgaaaat ttgaaattct
     2281 ttgttagtgc gaatttgact ctttttgact ttgatgaaaa agaagccaca aaagaatttg
     2341 caaatcttaa aaaagaatac gacaatatct tcaacctaga aagcaatcat ccttttgaat
     2401 ggcgttttga attccctgaa attttggacg atgatggaaa tttcaaaggc tttgatctca
     2461 tcatcggcaa tccaccttat ataaaagaaa atgataataa agatcttttt accaatacaa
     2521 aaaagttaag aacttatcaa ggaaaaatgg atatttggta tcatttcgta gggcgtggat
     2581 ttgatatact taagaataat ggatatttag catttatcgc tacaaataat tgggttacaa
     2641 attcaggggc taaaaaacta cgcaatatag ttttagaaga atctcaaatt ttaagccttg
     2701 ttgattttag ttcttttatg gtgtttgatt ctgcaagcat acaaactatg ataatgcaat
     2761 ttcaaaaaat aaaaccgcct aaaaattacg aatttcattt tgctaaaatc acaacccaaa
     2821 ctccaattta tgaagatgtt ataaatcttt taaaaaatga aaaaacccaa aacaatgaaa
     2881 ttttaagcat aaatttaact ccaaaaaaat ttatagataa aactttaaat ttcacaaaaa
     2941 gcgactatga agaacttttt aacaaaatcc aaaaatatgg aaaattttac cttgaagaaa
     3001 gtgaagt
//
LOCUS       DAPIVO010000101         2675 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.102, whole genome shotgun sequence.
ACCESSION   DAPIVO010000101 DAPIVO010000000
VERSION     DAPIVO010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2675)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2675)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2675
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.102"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..2664
                     /locus_tag="RJ239_001733"
     rRNA            <1..2664
                     /locus_tag="RJ239_001733"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          789 a          513 c          722 g          651 t
ORIGIN      
        1 tagggcggga cacgaggaat cctgtctgaa tccgggtcga ccacgatcca accctaaata
       61 ctaataccag atcgatagtg cacaagtacc gtgagggaaa ggtgaaaaga actgaggtga
      121 tcagagtgaa atagaacctg aaaccatttg cttacaatca ttcagagccc tatgtagcaa
      181 tacagggtga tggactgcct tttgcataat gagcctgcga gttgtggtgt ctggcaaggt
      241 taagcaaacg cgaagccgta gcgaaagcga gtctgaatag ggcgcttagt cagatgctgc
      301 agacccgaaa cgaagtgatc tatccatgag caagttgaag ctagtgtaag aactagtgga
      361 ggactgaacc cataggcgtt gaaaagcccc gggatgactt gtggataggg gtgaaaggcc
      421 aatcaaactt cgtgatagct ggttctctcc gaaatatatt taggtatagc gttgtgtcgt
      481 aatataaggg ggtagagcac tgaatgggct agggcataca ccaatgtacc aaaccctatc
      541 aaactccgaa taccttatat gtaatcacag cagtcaggcg gcgagtgata aaatccgtcg
      601 tcaagaggga aacaacccag actaccagct aaggtcccta agtcttactt aagtggaaaa
      661 cgatgtgaag ttacttaaac aaccaggagg ttggcttaga agcagccatc ctttaaagaa
      721 agcgtaatag ctcactggtc tagtgatttt gcgcggaaaa tataacgggg ctaaagtaag
      781 taccgaagct gtagacttgc gcacaactta gattatttaa gtttagaata tgagaaacta
      841 agttatgttt agttatattt ttactgattt ttatagagta aagatagaaa taaaacttag
      901 taaaatcagt aaaaatattc ttaggctaaa gttaagtagt ttaagttgtg tgcaagtggt
      961 aggagagcgt tctatttgcg tcgaaggtat accggtaagg agtgctggag cgaatagaag
     1021 tgagcatgca ggcatgagta gcgataatta atgtgagaat cattaacgcc gtaaacccaa
     1081 ggtttcctac gcgatgctcg tcatcgtagg gttagtcggg tcctaagtcg agtccgaaag
     1141 gggtagacga tggcaaattg gttaatattc caataccaac attagtgtgc gatggaagga
     1201 cgcttagggc taagggggct agcggatgga agtgctagtc taaggtcgta ggaggttata
     1261 caggcaaatc cgtataacaa tactccgaga actgaaaggc tttttgaagt cttcggatgg
     1321 atagaagaac ccctgatgcc gtcgagccaa gaaaagtttc taagtttagc taatgttgcc
     1381 cgtaccgtaa accgacacag gtgggtggga tgagtattct aaggcgcgtg gaagaactct
     1441 ctttaaggaa ctctgcaaaa tagcaccgta tcttcggtat aaggtgtggt tagcttcgta
     1501 ctaggattta ctccgaaagc gaagaaactt acaacaaaga gtccctcccg actgtttacc
     1561 aaaaacacag cactctgcta actcgtaaga ggatgtatag ggtgtgacgc ctgcccggtg
     1621 ctcgaaggtt aattgatggg gttagcatta gcgaagctct tgatcgaagc ccgagtaaac
     1681 ggcggccgta actataacgg tcctaaggta gcgaaattcc ttgtcggtta aataccgacc
     1741 tgcatgaatg gcgtaacgag atgggagctg tctcaaagag ggatccagtg aaattgtagt
     1801 ggaggtgaaa attcctccta cccgcggcaa gacggaaaga ccccgtggac ctttactaca
     1861 gcttgacact gctacttgga taagaatgtg caggataggt gggaggcttt gagtatatga
     1921 cgccagttgt atatgagcca ttgttgagat accactcttt cttatttggg tagctaacca
     1981 gcttgagtta tcctcaagtg ggacaatgtc tggtgggtag tttgactggg gcggtcgcct
     2041 cccaaataat aacggaggct tacaaaggtt ggctcagaac ggttggaaat cgttcgtaga
     2101 gtataaaggt ataagccagc ttaactgcaa gacatacaag tcaagcagag acgaaagtcg
     2161 gtcttagtga tccggtggtt ctgtgtggaa gggccatcgc tcaaaggata aaaggtaccc
     2221 cggggataac aggctgatct cccccaagag ctcacatcga cggggaggtt tggcacctcg
     2281 atgtcggctc atcgcatcct ggggctggag caggtcccaa gggtatggct gttcgccatt
     2341 taaagcggta cgcgagctgg gttcagaacg tcgtgagaca gttcggtccc tatctgccgt
     2401 gggcgtaaga agattgaaga gatttgaccc tagtacgaga ggaccgggtt gaacaaacca
     2461 ctggtgtagc tgttgttctg ccaagagcat cgcagcgtag ctaagtttgg aaaggataaa
     2521 cgctgaaagc atctaagcgt gaagccaact ctaagatgaa tcttctctaa gctctctaga
     2581 agactactag tttgataggc tgggtgtgta atggatgaaa gtcctttagc tgaccagtac
     2641 taatagagcg tttggcttat ctttaataaa gcatc
//
LOCUS       DAPIVO010000102         2441 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.103, whole genome shotgun sequence.
ACCESSION   DAPIVO010000102 DAPIVO010000000
VERSION     DAPIVO010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.103"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..326
                     /locus_tag="RJ239_001734"
     CDS             <1..326
                     /locus_tag="RJ239_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-2,3 sialyltransferase"
                     /protein_id="HDV7331828.1"
                     /translation="KFINHSMACDLQALDYLMKRYDVNIYSLNSDEYFKLAPDIGSDF
                     VLSKKPKKYINDILIPDKYAQERYYGKKSRLKENLHYKLIKDLIRLPSDIKHYLKEKY
                     ANKNR"
     gene            307..1338
                     /gene="neuB1"
                     /locus_tag="RJ239_001735"
     CDS             307..1338
                     /gene="neuB1"
                     /locus_tag="RJ239_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialic acid synthase"
                     /protein_id="HDV7331829.1"
                     /translation="MQIKIDKLTISQKNPLIIPEIGINHNGSLEIAKLMVDAAKRAGA
                     KIIKHQTHIVEDEMSQEAKNVIPGNANISIYEIMEQCALNYKDELALKEYVEKQGLVY
                     LSTPFSRAAANRLEDMGVSAYKIGSGECNNYPLIKHIAQFKKPMIISTGMNSIESIKP
                     TVKILRDYEIPFVLLHTTNLYPTPSHLVRLQAMLELYKEFNCLYGLSDHTTNNLACIG
                     AIALGASVLERHFTDTMDRKGPDIVCSMDESTLKDLINQTQEMVLLRGDNNKNPLKEE
                     QVTIDFAFASVVSIKDIKKGEILSMDNIWVKRPSKGGISAKDFEAILGKRAKKDIKNN
                     IQLTWDDFE"
     gene            1335..>2441
                     /gene="neuC"
                     /locus_tag="RJ239_001736"
     CDS             1335..>2441
                     /gene="neuC"
                     /locus_tag="RJ239_001736"
                     /EC_number="3.2.1.183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HDV7331830.1"
                     /translation="MKKIVFVSGTRADFSKIKSLMMKVENSNEFELFIFVTGMHMSKK
                     FGSTYMEIEKCGFKNIYKYINHDKYYQMDKALSSTIDGFSKFIHEIEPDLIVVHGDRV
                     EPLAAAIVGSLNNILVAHIEGGELSGTIDESLRHAISKLAHIHLVNDEIAKKRLIQMG
                     EDEKSIFIIGSPDLELLNNTISLDEAKKYYDIKFKNYAIAIFHPITTEINSLYKQSEE
                     FVNALIKSEKNYIVIYPNNDLGFELILQNYERLKNNERFKIFPSLRFEYFISLLKNAN
                     FIIGNSSCIIKEALYLNINGILVGSRQDGRTDINKTIRVNAEEKDILEAILNTSKCTN
                     ITNKRLEILNSSEQFYRLLKNNILFTINKQKIFMD"
BASE COUNT         1013 a          260 c          406 g          762 t
ORIGIN      
        1 tcaaatttat caatcattca atggcatgtg atttacaagc tttagattat ctaatgaaaa
       61 ggtatgatgt gaatatttat agtttaaatt cagatgagta ttttaaattg gctccggata
      121 ttggaagtga ttttgtattg agtaaaaaac caaaaaaata tataaatgat atattgatac
      181 cagataagta tgcacaagaa agatattatg gaaaaaaaag taggttaaaa gaaaatctcc
      241 attataagct aataaaagat ctaattagac ttccaagtga cataaaacac tacttaaagg
      301 aaaaatatgc aaataaaaat agataaatta actatttctc agaaaaatcc tttgataatc
      361 cctgaaatag gtataaatca caatggtagt ttagaaatag caaaacttat ggtagatgcg
      421 gccaaaagag caggagctaa gataataaaa caccaaactc atatagtcga agatgaaatg
      481 agccaagagg ctaaaaatgt tataccgggt aatgcaaata ttagcattta tgagattatg
      541 gaacaatgtg cattaaacta taaagatgaa ctagctttaa aagagtatgt agagaagcaa
      601 ggtttggtat atcttagcac tccatttagt agagctgcag caaatcgttt agaagatatg
      661 ggtgtaagtg cttataaaat aggctcaggt gaatgtaata attatccttt aataaaacat
      721 atagcacaat ttaaaaaacc tatgattata agcaccggaa tgaatagcat agaaagtata
      781 aaacccacag ttaagatact tagagattat gaaatacctt ttgttttgct tcatactaca
      841 aatttatatc ctactccatc gcacttagta agattacaag ctatgttaga attatataaa
      901 gagtttaatt gtctttatgg acttagtgat cataccacaa acaatcttgc atgtataggt
      961 gcaatagctc ttggagcaag tgtactagaa agacacttta cagataccat ggacagaaaa
     1021 ggccctgata tagtttgctc tatggatgaa agcactttaa aagatcttat aaatcaaaca
     1081 caagaaatgg tgcttttaag aggcgataat aataaaaatc ctttaaaaga agagcaagtg
     1141 accattgatt ttgcatttgc tagtgtagta agtattaaag atataaaaaa gggtgaaatt
     1201 ttatctatgg ataatatttg ggtaaaaaga ccttcaaaag gtggtataag tgcaaaggat
     1261 tttgaagcca tacttggaaa aagagcaaaa aaagatataa aaaataatat acaactaaca
     1321 tgggatgatt ttgaatgaaa aaaatagttt ttgttagcgg aactagagct gatttttcta
     1381 aaataaaatc tctaatgatg aaagttgaaa attcaaatga atttgaatta tttatatttg
     1441 taaccggtat gcatatgagt aaaaagtttg gttctactta tatggaaata gaaaaatgtg
     1501 gttttaaaaa tatatataaa tatataaatc acgataagta ttatcagatg gataaggctt
     1561 tatcatcaac aatagatggt ttttctaaat ttatacatga gatagagcct gatttaatag
     1621 tagtgcatgg tgatagagtg gagcctttag ctgctgctat agtaggaagt ttaaataata
     1681 tcttagtggc acatatagaa ggcggagagc tttcaggaac tatagatgag agtttaagac
     1741 atgctattag taaattagca catattcatt tagtaaatga tgaaatagca aaaaaaagat
     1801 taatacaaat gggtgaagat gagaaatcta tttttattat aggttctcct gatttagaat
     1861 tgctaaataa tactatatct ttagatgaag caaaaaaata ttatgatata aaatttaaaa
     1921 attatgccat agctatattt catccaatta caaccgaaat aaactcttta tataaacaaa
     1981 gtgaagaatt tgtaaatgct cttataaaaa gtgaaaaaaa ttatatagtt atttatccaa
     2041 ataatgattt aggatttgaa ttaattttgc aaaattatga aaggctaaaa aataatgaaa
     2101 gatttaaaat ttttccttct ttaagatttg agtattttat aagtttgcta aaaaatgcca
     2161 attttatcat aggaaattca agttgtataa taaaagaagc tttatatctt aatataaatg
     2221 gaattttagt tggttcaaga caagatggta gaactgacat taataaaaca ataagagtaa
     2281 atgcagagga aaaggatata ttggaagcga ttttaaatac tagtaaatgc actaatatta
     2341 caaataaaag actagaaatt ttaaatagtt ctgagcaatt ttataggtta ttgaaaaata
     2401 atattttatt tactataaac aagcaaaaaa tattcatgga t
//
LOCUS       DAPIVO010000103         2267 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.105, whole genome shotgun sequence.
ACCESSION   DAPIVO010000103 DAPIVO010000000
VERSION     DAPIVO010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2267)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2267)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.105"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            54..317
                     /gene="rpsT"
                     /locus_tag="RJ239_001737"
     CDS             54..317
                     /gene="rpsT"
                     /locus_tag="RJ239_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HDV7331831.1"
                     /translation="MANHKSAEKRARQTIKKTERNRFYRTRLKNITKAVREAAANGNK
                     NAANEALKVANKSIHAMVSRGFIKKQTASRRVSRLALLVNKIA"
     gene            336..1403
                     /gene="prfA"
                     /locus_tag="RJ239_001738"
     CDS             336..1403
                     /gene="prfA"
                     /locus_tag="RJ239_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HDV7331832.1"
                     /translation="MLASKLDPFFKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEP
                     IVLKAKEYLKTLDNIEENKALLNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDP
                     NDERNIFLEIRAGTGGDEASLFVGDLIKAYARYAENRGYKLEIVSSSEGSVGGFKEII
                     MLVKGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDDIEIEINPNDL
                     KVDVMRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYE
                     MQESERLAKESEARKSQVGSGDRSERIRTYNFPQNRISDHRINLTLYRLDAIMQDGLF
                     DEIIEPLITHHQAQALQEQNL"
     gene            complement(1417..2172)
                     /locus_tag="RJ239_001739"
     CDS             complement(1417..2172)
                     /locus_tag="RJ239_001739"
                     /EC_number="1.14.14.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HugZ family heme oxygenase"
                     /protein_id="HDV7331833.1"
                     /translation="MNFESIISHMNDHHKSNLVDLCKKFGGIEQVQDVFLKSVDFNGL
                     DLVYNDKENLRVEFPKKADENTIKDAIISLCMSAKSEQNFSGVEKELNEFMLSFNSVA
                     LATLNANGEVVCSYAPFVSTQWGNYIYISEVSEHFNNIKVNPNNIEIMFLEDESKAVS
                     VILRKRLRYRVNASFLERGERFDQIYDEFEKQTGGEGGIKTIRKMLDFHLVKLEFKKG
                     RFVKGFGQAYDIENGNVAHVGASGNPHKFLHKH"
BASE COUNT          843 a          378 c          339 g          707 t
ORIGIN      
        1 taaattttat tcttatataa tttagtcttt aatttcaaaa aaggaaaata taaatggcaa
       61 accataaatc tgctgaaaaa agagcaagac aaactattaa aaaaacagaa agaaatagat
      121 tctatagaac aagacttaaa aatataacta aagccgtaag agaagctgca gcaaatggaa
      181 ataaaaatgc tgctaatgaa gctttaaaag tagctaataa aagcattcat gctatggtaa
      241 gtcgcggttt cattaaaaaa caaactgctt ctcgccgtgt aagccgctta gcccttttag
      301 taaataaaat cgcataattt tctatatagt ttttaatgtt agctagcaaa ctagatcctt
      361 tttttaaacg ctttgaagag ttaaattctc ttcttagcag ttctgatata ctcaacgata
      421 tcagtaaaat gactacactc tctaaagaac aaaaaaattt agaacctatc gttttaaaag
      481 ctaaagagta tttaaaaact ttagacaata tagaagaaaa taaagctttg ctaaacgatc
      541 cagaacttgg ggaacttgca aaagaagaac taaaaacttt agaagaatta aaaccgaaac
      601 ttgaagaaga gattaaaatt ttacttcttc ctaaagatcc caatgatgaa agaaatattt
      661 ttcttgaaat tcgtgcaggc acaggtggcg atgaggcatc tttatttgtg ggagatctta
      721 taaaagctta tgcaagatat gctgaaaatc gcggctataa acttgagatt gtaagctcta
      781 gtgaaggaag cgtaggtgga tttaaagaaa tcatcatgct tgttaaagga acaggggctt
      841 attcaagact taaatatgaa ggtggaacgc accgtgttca aagagttcct caaacagaat
      901 cccaaggacg cgtgcatact tctgctatca ccgtggcagt aatgccagaa gttgatgata
      961 tagaaatcga aatcaatcca aacgatctta aagttgatgt tatgcgatct tcaggacatg
     1021 gtggacaaag tgtaaatact actgattcag ctgttcgtat cactcatatc cctacaggta
     1081 tagttgtagt caatcaagat ggaaaaagcc aacacaaaaa taaagaaagt gcgatgaaag
     1141 tcctaaaagc aaggctttat gaaatgcaag agagtgaaag actagcaaaa gaaagtgaag
     1201 caagaaaatc acaagtagga agcggagata gaagcgaacg cattcgcact tacaattttc
     1261 cacaaaatcg tatcagcgat catagaataa atcttacttt atatcgctta gatgccatta
     1321 tgcaagatgg gctttttgat gaaatcatag aacctttaat cactcatcat caagcccaag
     1381 ctttacaaga acaaaattta taagatttta tataaattaa tgcttatgta ggaatttatg
     1441 tggatttcca ctagcaccta catgtgcaac atttccattt tctatatcat aagcttgacc
     1501 aaaacctttt acaaagcgtc cttttttaaa ttcaagcttt actagatgaa aatcaagcat
     1561 cttgcgtata gttttaatgc ctccttctcc tccggtttgt ttttcaaact catcataaat
     1621 ttgatcaaat ctttcacctc tctctaaaaa gcttgcattt actctatagc gcaatctttt
     1681 acgaagtata acagaaacag ctttactctc atcctctaaa aacattattt ctatattgtt
     1741 tggatttact ttgatgttgt taaaatgttc acttacttca cttatataaa tataatttcc
     1801 ccattgtgtg cttacaaaag gtgcatacga gcaaacaact tctccatttg catttaaagt
     1861 tgccaaagct acagaattaa aacttagcat aaattcattt aattcttttt ctacaccact
     1921 aaaattttgc tcgctctttg cactcatgca aagggatatt atagcatctt taatcgtgtt
     1981 ttcatcggct tttttaggaa attccactcg taaattttct ttatcattgt aaacaagatc
     2041 taagccatta aaatcaacac tttttagaaa aacatcttgt acttgctcaa taccaccaaa
     2101 ttttttacaa agatcgacta aatttgattt atgatgatca ttcatatgag aaataatgct
     2161 ttcaaaattc atttttatcc tttcttgatt ttaaaataaa atattaaaaa aaatggtatc
     2221 aattatcaaa ttaaaaagca cttaaaatat ataaattatc tatttta
//
LOCUS       DAPIVO010000104         2240 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.106, whole genome shotgun sequence.
ACCESSION   DAPIVO010000104 DAPIVO010000000
VERSION     DAPIVO010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2240)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2240)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2240
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.106"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(185..261)
                     /locus_tag="RJ239_001740"
     tRNA            complement(185..261)
                     /locus_tag="RJ239_001740"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(225..227),aa:Ile,seq:gat)
     gene            complement(270..345)
                     /locus_tag="RJ239_001741"
     tRNA            complement(270..345)
                     /locus_tag="RJ239_001741"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(310..312),aa:Ala,seq:tgc)
     gene            complement(448..1960)
                     /locus_tag="RJ239_001742"
     rRNA            complement(448..1960)
                     /locus_tag="RJ239_001742"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          616 a          524 c          418 g          682 t
ORIGIN      
        1 atatatatta atataatcat tataaatata aatacataat gtatatccta tttatattta
       61 ttaaagtata ttcttttata gttaaagata aaaataaatc taagtatagg gtttatattt
      121 tatatttaat ctactttata tacttgcttt agattttaaa gcttctttat tcaaatcttt
      181 tttatggtgg gcctaacaag acttgaactt gtgacctcac ccttatcagg ggtgcactct
      241 aaccagctga gctataggcc cttaataaat ggtggagaat agcgggatcg aaccgctgac
      301 ctcctgcgtg caaagcaggc gctctcccag ctgagctaat tccccataaa caattagctt
      361 tatcatcaat ctttgaaatc taaacaagaa tcaattgagt ttatatattg aagtaatagt
      421 tgtgagactt attactttgt actctagaaa ggaggtgatc caaccgcagg ttctcctacg
      481 gttaccttgt tacgacttca ccccagtcgc tgattccact gtggacggta actagtttag
      541 tattccggct tcgagtgaaa tcaactccca tggtgtgacg ggcggtgagt acaagacccg
      601 ggaacgtatt caccgtagca tggctgatct acgattacta gcgattccgg cttcatgctc
      661 tcgagttgca gagaacaatc cgaactggga catattttat agatttgctc cacctcgcgg
      721 tattgcgtct cattgtatat gccattgtag cacgtgtgtc gccctgggca taagggccat
      781 gatgacttga cgtcgtccac accttcctcc tccttacgaa ggcagtctat ttagagtgct
      841 cggccgaacc gttagcaact aaatacgtgg gttgcgctcg ttgcgggact taacccaaca
      901 tctcacgaca cgagctgacg acagccgtgc agcacctgtc tctaagttct agcaagctag
      961 caccctcata tctctataag gttcttagga tatcaagccc aggtaaggtt cttcgcgtat
     1021 cttcgaatta aaccacatgc tccaccgctt gtgcgggtcc ccgtctattc ctttgagttt
     1081 taatcttgcg accgtactcc ccaggcggta cacttaatgc gttagctgca ttactgagat
     1141 gactagcatc ccaacaacta gtgtacatcg tttagggcgt ggactaccag ggtatctaat
     1201 cctgtttgct ccccacgctt tcgcgcctta gcgtcagttg agttccagca gatcgccttc
     1261 gcaatgggta ttcttggtga tatctacgga ttttacccct acaccaccaa ttccatctgc
     1321 ctctccctca ctctagacta tcagtttccc aagcagttta atggttaagc cattagattt
     1381 cacaagagac ttgataatcc gcctacgcgc cctttacgcc cagtgattcc gagtaacgct
     1441 tgcaccctcc gtattaccgc ggctgctggc acggagttag ccggtgctta ttccttaggt
     1501 accgtcagaa ttcttcccta agaaaaggag tttacgctcc gaaaagtgtc atcctccacg
     1561 cggcgttgct gcgtcagggt ttcccccatt gcgcaatatt ccctactgct gcctcccgta
     1621 ggagtctgga ccgtgtctca gttccagtgt gactgatcat cctctcagac cagttaagcg
     1681 tcatagcctt ggtaagccat taccttacca actagctgat actatatagt ctcatcctac
     1741 accgaaaaac tttccctact caacttgtgt taagcaggag tatagagtat tagcagtcgt
     1801 ttccaactgt tgtcctcttg tgtagggcag attaactata ccttactcac ccgtgcgcca
     1861 ctaatccact tctagcaagc tagaagcttc atcgttcgac ttgcatgtat taggcacgcc
     1921 gccagcgttc actctgagcc aggatcaaac tctccataaa aaattataga tagtttaatc
     1981 tttttcttca aagaaaaagt tatgaaagat taaaagaaaa gcttttaatc tttttaatta
     2041 ttagattgaa tagattttac ataattgctt atgcctaaat ctgttctggc tcaatcgatc
     2101 acttatttag atttcaaaga ttgactaata agatttgaat aacaatacta atttaaaaga
     2161 acaaaacaaa aaatcatttt taaaagaaaa gtttttaaat taaaaaacaa gatttataaa
     2221 aaagctttta gtttataaga
//
LOCUS       DAPIVO010000105         2184 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.107, whole genome shotgun sequence.
ACCESSION   DAPIVO010000105 DAPIVO010000000
VERSION     DAPIVO010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2184)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2184)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2184
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.107"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..279
                     /locus_tag="RJ239_001743"
     CDS             <1..279
                     /locus_tag="RJ239_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDV7331834.1"
                     /translation="GAMAVMDIAETATTNLDQIRADIGSVQNQLQVTINNITVTQVNV
                     KAAESTIRDVDFAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ"
     gene            complement(310..>2184)
                     /locus_tag="RJ239_001744"
     CDS             complement(310..>2184)
                     /locus_tag="RJ239_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7331835.1"
                     /translation="NNFNKNLKALSGFEYNNLRKKLEDLKELREFTFTQGKDNLDINI
                     IKKRNLKKMYQDPIKELEKNLEYFKDFTRYPVLFFYGFGNGILYKILLQNQALKRIII
                     FEKELELIFLALNFIDFSKDLSLGRLIILHHDDINLPKMDKVFRLIGDLFYRSYNLHI
                     ANDFYEHYKEDILKLNKLNMQIIKNHNLMHGNDPKDALQGIEQFVYNLPSMITHPSYK
                     ELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYV
                     CMLERDEIVAECFNNDFKDFDKDIIFLVASLVHKKTISYLKKNKRKYILIIKGQPFAR
                     CLGLDDYGYINAGMSVSHMAYELAENLGHKNIILIGQDLAYAKDGQTHSQGFIHANLH
                     NGDYERDLDRFSTTAYGGNGKVQSSEIWTLFRQIFENFIAFSKSKTYNCTEGGARIES
                     AIEKPFKELCEDLLENKKDKKFKKLQVLNTKEQVKLGLKIYQKIKKNMNLSLNFKKEC
                     KKVQKQIHNLTHGKNELSLEQINQNIDKIKEKLSNKKYLFLQEILGPTLHHEQSILTP
                     LYLKDIKDESDKQNKLFAWVYAHEALIENIIELLEVQDKRLKIAILPLLDFLEKKKAL
                     "
BASE COUNT          711 a          321 c          313 g          839 t
ORIGIN      
        1 ggtgctatgg ctgtgatgga tatagctgaa acagccacaa caaatcttga tcaaatcaga
       61 gccgacattg gttcggtgca aaatcaactt caagtgacta taaacaacat caccgtaact
      121 caagtaaacg ttaaagcagc tgaatcaacc ataagagatg tagactttgc agctgaaagt
      181 gcaaattttt ctaaatataa cattcttgca caatcaggtt cttatgctat gagtcaggct
      241 aatgcagtgc agcaaaatgt tttaaaactt cttcaataat ttcttagatg cttttatgca
      301 tctaagcttt taaagtgctt ttttcttttc taagaagtct agcaaaggta aaatagcgat
      361 tttaagtctt ttatcttgaa cttctaaaag ttctatgata ttttctatca aagcttcgtg
      421 tgcataaacc caagcaaaaa gtttattttg tttatcagat tcatctttga tatctttaag
      481 atataaaggc gttaatatac tttgttcatg atgtaaagta gggcctaaaa tttcttgcaa
      541 aaagagatat tttttatttg aaagtttttc tttgattttg tctatatttt ggtttatttg
      601 ttcgagagag agctcgtttt ttccatgggt aagattgtga atttgttttt gaactttttt
      661 acactctttt ttaaaattta aggataaatt catatttttt ttaatttttt gatagatttt
      721 taatccgagt tttacttgtt ctttagtatt taaaacttgt aattttttaa attttttatc
      781 ttttttattt tcgagtaaat cttcgcaaag ttctttaaaa ggtttttcta tagcgctttc
      841 tatcctagca cctccttcag tgcaattata agttttactt ttgctaaaag caatgaaatt
      901 ttcaaaaatt tgtctaaaaa gtgtccaaat ttcagaactt tgaacttttc catttcctcc
      961 ataagctgta gtgctaaatc tatctaaatc tctttcatag tctccattgt gtaaattagc
     1021 atggatgaaa ccttgagaat gtgtttgccc atctttggca taagctaaat cctgacctat
     1081 gagaatgatg tttttatgtc ctaaattttc agccagttca taagccatat gagatacact
     1141 catgcctgcg ttaatatatc cataatcgtc tagccccaag catctcgcaa aaggctggcc
     1201 ttttatgatt aaaatgtatt ttcttttatt ttttttaaga taagaaatgg tttttttatg
     1261 caccaaagaa gctactagaa aaatgatgtc tttatcaaaa tctttaaaat cattattaaa
     1321 acattcagct actatttcat cgcgttccaa catacaaaca taatcaggtt ttataccatg
     1381 cttagctaaa ataggataag aagaatccgc acaaaaaatt gtagctttac tagcatattt
     1441 ttttaataaa ggaagttgtt tagtaagaga tggtcctgta gaaacaatga tagctgtatc
     1501 acttataccc tttcttttag aaagcaattc tttataacta ggatgggtaa tcattgaagg
     1561 aagattataa acaaattgtt ctatgccttg aagagcatct tttggatcat taccatgcat
     1621 aagattgtga tttttgatga tttgcatgtt gagtttatta agttttaaaa tatcttcttt
     1681 atagtgttca taaaaatcat tagcaatgtg tagattataa gaacgataaa acaaatcccc
     1741 tatcaaacga aaaactttat ccattttagg aagattaata tcatcatgat gtaaaataat
     1801 gagtcgccct aagcttaaat ctttgctaaa atctatgaaa tttaaggcca aaaagataag
     1861 ctctaattct ttttcaaaga tgattattct tttaagtgct tgattttgaa gtagaatttt
     1921 atataaaatt ccatttccaa aaccataaaa aaaaagcaca ggatagcgtg taaaatcttt
     1981 aaaatattct aaattttttt caagctcttt gatgggatct tgatacattt tttttaaatt
     2041 tctttttttt atgatattga tatcaagatt atcttttcct tgagtgaaag taaattctct
     2101 aagctctttt agatcctcaa gttttttgcg taagttgtta tactcaaaac cgcttaaagc
     2161 ttttaaattt ttgttaaaat tatt
//
LOCUS       DAPIVO010000106         2131 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.108, whole genome shotgun sequence.
ACCESSION   DAPIVO010000106 DAPIVO010000000
VERSION     DAPIVO010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2131)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2131)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2131
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.108"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..207
                     /locus_tag="RJ239_001745"
     CDS             <1..207
                     /locus_tag="RJ239_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7331836.1"
                     /translation="ARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALI
                     KNILPLEEKLKERKLDKWMERVRR"
     gene            204..2063
                     /locus_tag="RJ239_001746"
     CDS             204..2063
                     /locus_tag="RJ239_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7331837.1"
                     /translation="MREELFLKNTQALFEVDEFLACTLRSLKYLTFALIQDENGINFK
                     KDDIFLYENPNKELLENLTLFKTEYNKYPVLFFYGFGNGMFYKTLCKNKQHKHIIIFE
                     DNLEILTLAFHLFDFSEELKKEQLILFYTPNINTAQLTTLFTYEIIQKSVKIFNLFIH
                     NDFYQQFYSTQIQNINTQLIEMIRFIVLNKGNDPHDSLVGIKHTLDNLPKMLNHGIFQ
                     EFLKERRAKVENAIIVSTGPSLIKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYV
                     CMLERDDIVSKCFDNDFGDFNKGILFILASVVHKEVLDFLEKDQRAYMLVHRPLNFAA
                     SLKLDEYGYLGVGHSVSNMIYELAGALRFENIIFIGQDLAYGEDGSSHPKEHIHGSQG
                     EEIRGEKYTLAYGGKGKVRTQLTWNLFRQAFEKDIFWAKEKLNITTYNCTEGGARIEG
                     TIEKPFLWACENLLDKDLNKPFDFPKFLDKKLAKEKLEKTKKYLQKSILESKEFIKKT
                     QTQLQKLRYTLEKNDKNFQTLEKIKNDLLNLFKEFKKLKLFNELCQAIYFHNECEILK
                     FEVLNTNKQKENLIDFLKIQHNWFIQGLGYLDTQNKTIEKSLENWNFDDIIKK"
BASE COUNT          857 a          282 c          302 g          690 t
ORIGIN      
        1 gctagaattt atgttttaaa tcctaaaacc aaagaagatg cttttaataa aagtattctt
       61 tggataaaag aacatttaga atttatggaa ttagtttatg gacatattaa agcacaagaa
      121 aatgctttga ttaaaaatat acttccttta gaagaaaaac ttaaagaaag aaaattagat
      181 aaatggatgg aaagggtgag aaggtgagag aagagctttt tttaaaaaat actcaagctt
      241 tgtttgaggt cgatgagttt ttagcttgta cactgagatc acttaaatac ttaacttttg
      301 cacttatcca agatgaaaat ggaataaatt ttaaaaaaga tgatattttt ctttatgaaa
      361 atcccaataa agagctttta gaaaacctta ctctgtttaa aaccgaatat aacaaatatc
      421 ctgttttgtt tttttatggc tttggaaatg gaatgtttta taaaacttta tgtaaaaaca
      481 aacaacataa acacattatc atttttgaag acaatcttga aattttaact ttagcttttc
      541 atttatttga ttttagcgaa gaattaaaaa aagaacaact aatacttttt tatactccaa
      601 atattaatac agcacaactc accacacttt ttacttatga aatcattcaa aaaagtgtaa
      661 aaatttttaa tctttttatc cataatgatt tttatcaaca attttatagt actcaaatac
      721 aaaatataaa tactcaactg atagaaatga tacgatttat cgttttaaac aaaggtaatg
      781 atccacatga ttctttagtt ggaatcaaac ataccctaga taatctccct aaaatgttaa
      841 atcatggaat ttttcaagaa tttctcaaag aaagaagagc taaggttgaa aatgctatca
      901 ttgtttctac aggaccaagt cttataaaac aacttccttt gttaaaaaaa tatgctaata
      961 aagctacaat tttttgtgcg gattcttctt atcctatttt agctaaacat ggtataaagc
     1021 ctgattatgt ttgcatgcta gagcgtgatg atatagtttc taaatgtttt gataatgatt
     1081 ttggcgattt taacaaaggc atacttttca tacttgcttc tgtggttcac aaagaagtat
     1141 tagatttttt agaaaaagat caaagagctt atatgcttgt acatcgccct ttaaattttg
     1201 cagctagttt aaaacttgat gaatatggat atcttggagt aggacacagt gtttccaata
     1261 tgatctatga actagcagga gctttaagat ttgaaaatat catttttata ggacaggatt
     1321 tagcttatgg cgaggatgga agttcacatc ctaaagagca tatacatgga agtcaaggtg
     1381 aagaaatcag aggagaaaaa tatacactag cttatggagg aaaaggcaaa gtaagaacac
     1441 aacttacttg gaatttgttt cgtcaagctt ttgaaaaaga tatattttgg gcaaaagaaa
     1501 aactcaatat caccacctac aactgcaccg aaggtggagc aagaatagaa ggaactatag
     1561 aaaaaccttt tttatgggct tgtgagaatt tacttgataa agatttaaat aaaccttttg
     1621 attttccaaa atttctagat aaaaaactag ccaaagaaaa attagaaaaa acaaaaaaat
     1681 atctccaaaa aagcatttta gaatccaaag aatttataaa aaaaactcaa actcagcttc
     1741 aaaagcttag atacacttta gaaaaaaatg acaagaattt tcaaactctt gaaaaaatca
     1801 aaaatgatct tttaaatctt tttaaagaat ttaaaaaact caagcttttt aatgaacttt
     1861 gtcaagctat ttattttcat aacgaatgcg aaattttaaa atttgaagtt ttaaacacaa
     1921 ataagcaaaa agaaaattta atagactttt tgaaaataca acacaattgg tttatccaag
     1981 gtttaggata tcttgatact caaaacaaaa ccatagaaaa aagtttagaa aattggaatt
     2041 ttgacgatat aatcaaaaaa taattaggat ttccaatgac cttcacccct actcaaaaag
     2101 aactctttaa caaaaacatt gaggctttaa a
//
LOCUS       DAPIVO010000107         2067 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.109, whole genome shotgun sequence.
ACCESSION   DAPIVO010000107 DAPIVO010000000
VERSION     DAPIVO010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2067)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2067)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2067
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.109"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..161
                     /locus_tag="RJ239_001747"
     CDS             <1..161
                     /locus_tag="RJ239_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDV7331838.1"
                     /translation="ENFSENKFIFGSNYPVAKITPAKWAKLIIESKIFDDLDKIFYKN
                     ALLIYKGG"
     gene            162..479
                     /locus_tag="RJ239_001748"
     CDS             162..479
                     /locus_tag="RJ239_001748"
                     /EC_number="5.1.3.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose mutarotase"
                     /protein_id="HDV7331839.1"
                     /translation="MQRYGQIIKIKKEKIEEYKELHTKPYEGVCEMIKECNIQNYSIY
                     LFGEYLFAYFEYIGADFEVDMAKMARDESTQKWWKVTDPCQISLGYVGQKWLNMEEVF
                     HLD"
     gene            493..1932
                     /gene="aldA"
                     /locus_tag="RJ239_001749"
     CDS             493..1932
                     /gene="aldA"
                     /locus_tag="RJ239_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002874345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HDV7331840.1"
                     /translation="MTTYLNYIDGKFIPHNGEFIEVLNPATKEVISRVASASLEDTKR
                     AIEAAKKAQKVWEAKPAIERANHLKEIASLIRKNANFLTEVLMQEQGKTRVLASIEIN
                     FTADYMDYTAEWARRYEGEIIQSDRANEHIYLYKSAIGVIGGILPWNFPFFLIARKMA
                     PALLTGNTIVIKPSSETPNNAFEFAKLVSQSSLPKGVFNLVAGKGSVVGYELSSNENI
                     GMVSLTGSVEAGTRVMEAAAKNIIKVSLELGGKAPAIVCKDADIDLAVEAIKASRICN
                     NGQVCNCAERAYVHTSVYDEFVDKFVKAMSKVSVGNTLKGDFDMGPLVNQAGVDNALA
                     MLQRATAKGAIVECGGKIIDTSGYYFPASVLTNVKHEDEIMQKEIFAPILPIAKFDTL
                     DEAIDMANDCEYGLTSSIYTQNLDIAMRASREIKFGETYINRENFEAMQGFHAGFRKS
                     GIGGADGKHGLEEYLATHVVYLQYNTNKQ"
BASE COUNT          770 a          246 c          425 g          626 t
ORIGIN      
        1 aagaaaattt tagtgagaat aaatttatat ttgggagcaa ttatccagtg gcaaagataa
       61 ctccagctaa gtgggccaag cttattatag agagtaaaat ttttgatgat ctagataaaa
      121 tattttacaa aaatgcttta ttaatttata aaggaggatg aatgcaaaga tacggtcaaa
      181 tcataaaaat aaaaaaagaa aaaatagaag aatacaaaga gcttcacaca aagccttatg
      241 aaggggtttg tgagatgatt aaggaatgca atatacaaaa ttattccatt tatttgtttg
      301 gggaatattt atttgcatat tttgaatata taggtgctga ttttgaagta gacatggcta
      361 aaatggcaag agatgaaagc acacaaaaat ggtggaaagt aacagatcct tgtcaaatat
      421 ctttaggcta tgtaggacaa aaatggctaa atatggaaga agtatttcac ttagactaaa
      481 aaaggagaaa aaatgacaac ttatttaaat tatattgatg gaaagtttat cccacataat
      541 ggagaattta tcgaagtttt aaatccagct accaaagaag tgatttcaag agtagctagc
      601 gcttctttag aagatactaa aagagcgatt gaagcagcca aaaaagcaca aaaagtttgg
      661 gaggctaaac cagcgattga aagagcaaat catttaaaag aaatagctag tttaatacgc
      721 aaaaatgcta atttcttaac cgaagtttta atgcaagagc aaggaaaaac cagagttttg
      781 gctagcatag agattaattt tacagcagat tatatggatt atacggccga atgggctaga
      841 agatatgagg gtgaaatcat acaaagcgat agggctaatg agcatatata tttatataaa
      901 agtgctattg gggtaattgg tggaatttta ccttggaatt ttccattttt cttaatcgca
      961 aggaagatgg cacctgcttt actaacagga aatactattg ttataaagcc aagcagtgaa
     1021 actccaaaca atgcttttga atttgcaaag cttgtttcgc aaagttcttt accaaaaggt
     1081 gtttttaact tagttgcagg taaaggcagt gtagtaggat atgaattatc aagcaatgaa
     1141 aatataggta tggtaagtct tacaggaagt gttgaagcag ggactagagt aatggaagct
     1201 gcagctaaaa atattatcaa agtttcttta gaacttggtg gaaaggcgcc agctatagtg
     1261 tgcaaagatg cggatattga tttagcagta gaagcgatta aagcaagtag aatttgcaat
     1321 aacggacaag tttgtaattg tgctgaaaga gcttatgtgc atacaagcgt ttatgatgaa
     1381 tttgtagaca aatttgtaaa agccatgagt aaagtaagtg ttggaaatac cttaaaaggt
     1441 gattttgata tgggaccatt ggtcaatcaa gcaggagttg ataatgcttt ggcaatgctt
     1501 caaagagcta cagctaaagg agcgattgta gaatgcggtg gaaaaatcat tgatacaagt
     1561 gggtattatt ttcccgcaag cgttcttact aatgttaaac acgaagatga gatcatgcaa
     1621 aaagaaattt ttgctccgat tttacctatt gctaaatttg atacacttga tgaagctatt
     1681 gatatggcaa atgattgtga atatggtctt acaagttcta tttatacaca aaatttagat
     1741 atagcaatga gagctagcag agaaattaaa tttggtgaaa cttatattaa tcgtgaaaat
     1801 tttgaggcta tgcaaggttt tcatgcaggc tttagaaaaa gtggcatagg cggagctgat
     1861 ggaaaacatg gtcttgaaga atatttagct acccatgtgg tatatttgca gtataatact
     1921 aataaacaat gatttttatc ctatctaaat ttttagatag gagttattat aatcttggaa
     1981 tcaagtatga tgctttataa ctatggatta aacacttttt tagtaatttc ttaaaatcaa
     2041 ttttggaatt tttcattttg tctaaaa
//
LOCUS       DAPIVO010000108         1998 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.110, whole genome shotgun sequence.
ACCESSION   DAPIVO010000108 DAPIVO010000000
VERSION     DAPIVO010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1998)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1998)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1998
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.110"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..1104
                     /gene="glf"
                     /locus_tag="RJ239_001750"
     CDS             <1..1104
                     /gene="glf"
                     /locus_tag="RJ239_001750"
                     /EC_number="5.4.99.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactopyranose mutase"
                     /protein_id="HDV7331841.1"
                     /translation="YDYLIVGSGLFGSIFAYEATEKGYTCLVVEQREHIGGNCYTENI
                     KNINVHKYGAHIFRTSDQNIWDYMNQFCEFNHFINSPIAIYKDEIYNLPFNMNTFSKL
                     WGIKTPNEARKIIEMQKQIIQHPPKNLEEQAISLVGTDVYEKLIKGYTEKQWGRSCKD
                     LPASIIRRLPVRYIYDNNYFNDPYQGIPKGGYTAIFDKMLKKSKVILNTDFLKYKDKF
                     KNKAKKIVFTGCIDAYYDYRYGALEYRSLKFEHKILNLDNFQGVAVVNYTDKEIPYTR
                     IIEHKHFEFGNTDTTVISEEYPLEWIKGIEPYYPINDEKNQALYEKYKQLAKHESNVY
                     FGGRLGEYRYYDMQDVVRSALLFCKNELKNKQG"
     gene            1106..>1998
                     /locus_tag="RJ239_001751"
     CDS             1106..>1998
                     /locus_tag="RJ239_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDV7331842.1"
                     /translation="MMNYNTPKVSIVVPSLNSISYIRECIDSILNQTLKDIEILCIDA
                     NSTDGTLEVLKNYEKKDKRLRVIISDKKSYGYQMNLGIKEAKGEYLGIVESDDYIKTN
                     MYERLYEIAKKNDCEVVKGDFYIFAYGKTEYVNVLRNSCEDIYNYKVNWNKDIRIFLG
                     SDGINPIGIYRLDLLRTNQIKLNETPGASYQDNGLWFQIFALAKSIYFINEAFYMLRR
                     DNPNSSVKSKEKVYCACEEYDFIRDFLKKHPDLEKTLAPICALHRFGNYMFTLERIDE
                     RYKLDFLKRFSQDFRKILKDK"
BASE COUNT          784 a          184 c          343 g          687 t
ORIGIN      
        1 tatgattatt taattgttgg ttctggattg tttggtagta tttttgctta cgaagcaact
       61 gaaaaaggtt atacttgttt agttgtggag caaagggaac atattggagg taattgttat
      121 accgaaaata ttaaaaatat caatgtgcat aaatatggtg ctcatatttt tagaacttca
      181 gatcagaata tatgggatta tatgaatcaa ttttgtgaat ttaatcattt tatcaattct
      241 cctattgcaa tctataaaga tgaaatttat aatttgcctt ttaatatgaa tacttttagt
      301 aaattatggg gaattaaaac tccaaatgaa gctagaaaaa taattgaaat gcaaaaacaa
      361 ataattcaac atcctccaaa aaatttggaa gaacaagcta tatctttagt tggtacagat
      421 gtatatgaaa aacttattaa gggttataca gaaaaacagt ggggtagatc ttgtaaggat
      481 ttgcctgctt ctattataag aagattgcct gttcgatata tttatgacaa taattatttt
      541 aatgatccct atcaaggtat ccctaaaggc ggctatacgg caatttttga taaaatgcta
      601 aaaaaaagta aagttatttt aaatactgat tttttaaaat ataaagataa atttaaaaat
      661 aaagctaaaa aaatagtttt tactggttgt attgatgctt attatgatta tcgatatgga
      721 gctttggaat atagaagttt aaaatttgag cataaaatat taaatttaga caattttcaa
      781 ggagtggcag ttgtcaatta tactgacaag gaaatacctt atactagaat tatagagcat
      841 aagcattttg aatttggaaa tacagataca acagttataa gcgaagaata tcctttagaa
      901 tggattaagg gtattgagcc ttattatcca ataaatgatg aaaaaaatca agctttgtat
      961 gaaaagtata agcaattagc aaaacacgag agtaatgtat attttggggg aagattggga
     1021 gaatatagat attatgatat gcaagatgtt gtaagatcgg cattattatt ttgtaaaaat
     1081 gagttaaaaa ataagcaagg atgaaatgat gaattataat actccaaaag tttctattgt
     1141 tgtaccttca ttaaattcta tatcatatat aagagaatgt attgatagta tattaaatca
     1201 aactttaaaa gatattgaga tactttgtat tgatgcaaat tcaactgatg gaactttaga
     1261 agttttaaaa aactatgaaa aaaaagataa gaggcttagg gtaataatat cagataagaa
     1321 aagttatggt tatcaaatga atcttggtat aaaagaggca aagggagaat atcttggtat
     1381 agttgaaagt gatgattata ttaaaacaaa tatgtatgaa agactttatg aaattgctaa
     1441 aaagaatgat tgtgaagttg ttaaagggga tttttatata tttgcatatg gtaaaactga
     1501 atatgttaat gttttgagaa attcttgtga agatatttat aattataaag taaattggaa
     1561 taaagatata agaatatttt taggttcgga tggaataaat ccaatcggta tttaccgatt
     1621 ggatttatta agaacaaatc aaattaagtt aaacgaaact ccaggagctt cctatcaaga
     1681 caatggttta tggtttcaaa tttttgctct tgctaaaagt atttatttta ttaatgaagc
     1741 attttatatg cttagaagag ataatcctaa ttcatccgta aaaagcaaag aaaaagtata
     1801 ttgtgcatgt gaagaatatg attttattcg agatttttta aaaaaacatc ctgatcttga
     1861 aaaaacactt gctccaatat gtgctttgca tcgttttgga aattatatgt ttactttaga
     1921 aagaatcgat gaaagatata agttggattt tttaaaaaga ttttcgcaag attttcgcaa
     1981 gattttaaaa gataaaga
//
LOCUS       DAPIVO010000109         1848 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.111, whole genome shotgun sequence.
ACCESSION   DAPIVO010000109 DAPIVO010000000
VERSION     DAPIVO010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1848)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1848)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.111"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            12..584
                     /locus_tag="RJ239_001752"
     CDS             12..584
                     /locus_tag="RJ239_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HDV7331843.1"
                     /translation="MKKVLLSSLVAVSLLSTGLFAKEYTLDKAHTDVGFKIKHLQISN
                     VKGNFKDYSAVIDFDPASAEFKKLDVTIKIASVNTENQTRDNHLQQDDFFKAKKYPDM
                     TFTMKKYEKIDNEKGKMTGTLTIAGVSKDIVLDAEIGGVAKGKDGKEKIGFSLNGKIK
                     RSDFKFATSTSTITLSDDINLNIEVEANEK"
     gene            complement(589..1545)
                     /locus_tag="RJ239_001753"
     CDS             complement(589..1545)
                     /locus_tag="RJ239_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331844.1"
                     /translation="MFLLDFLISLSFIFEISALVLSFYFKNSKIFFLTLVLLGAKLPY
                     FYTSFFQANLFVALFLPMIFTLFCVGKHHVLILNKKNIASITTLIFIGILSIILPRNT
                     TFNSAGLEFHFIALDFFKPVSELGFLFFLVGLILIFIKTFKTKEYYLLIAFFTAYFQF
                     LFQEGAGIRYFEFASLVFCFYLLNHAYRLAFFDTLTKLPNEKSLTRFTKGKNNYIIAL
                     LHFNELKDTKESYTKLILKQIAKILKRFRAKIFIVENDFILIFNDKNQALNHLAFLES
                     TLKNTEFNLENENFKPDFKLIWQESEENLDKNLQSLRARLLD"
     gene            complement(1607..1816)
                     /locus_tag="RJ239_001754"
     CDS             complement(1607..1816)
                     /locus_tag="RJ239_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDV7331845.1"
                     /translation="MTKKSKRDMAYELDIDVSTLYNWRKYKPNLYRIVMLGFKFDELL
                     DNSKKTHEELLHIEQTIQDEIAKFK"
BASE COUNT          739 a          217 c          260 g          632 t
ORIGIN      
        1 aaaggaaaaa aatgaaaaaa gttttattga gttcattggt tgcggtgtct ttgttaagca
       61 caggtttgtt tgctaaagaa tatactttag ataaagcaca tacagatgta ggttttaaaa
      121 tcaaacattt acaaattagc aatgtaaaag gaaatttcaa agattattct gcggtgattg
      181 attttgatcc tgcgagtgct gaatttaaaa agcttgatgt aactataaaa atcgcatctg
      241 taaatacaga aaatcaaaca agagataatc acttacaaca agatgatttt ttcaaagcaa
      301 aaaaatatcc tgatatgact tttacaatga aaaaatatga aaaaatcgat aatgaaaaag
      361 gcaaaatgac aggaacttta actatagctg gagtttctaa agatatcgtt ttagatgctg
      421 aaatcggcgg tgtagctaaa ggcaaagatg gaaaagaaaa aataggattt tctttaaatg
      481 gaaaaatcaa acgctctgat tttaaatttg caacaagtac ttcaactatt actttaagtg
      541 atgatattaa tttaaatatc gaagttgaag cgaacgaaaa ataatttttt agtctaagag
      601 tcttgctctt agactttgta aatttttatc caaattttct tcactttctt gccaaatcaa
      661 tttaaaatcc ggtttaaaat tttcattttc taaattaaat tccgtgtttt tcaaggtgga
      721 ttctaaaaaa gcaagatgat ttaaagcttg atttttatca ttaaaaatta aaataaaatc
      781 attttctacg ataaaaattt ttgctctaaa gcgttttaaa atttttgcaa tttgttttaa
      841 aatgagtttg gtatagcttt ctttggtatc ttttagttca ttaaaatgaa gcaaggcaat
      901 gatatagttg ttttttcctt ttgtaaagcg tgtaaggctt ttttcattgg gtagctttgt
      961 taaggtgtca aaaaaagcta acctataagc gtgatttaaa agataaaaac aaaaaaccaa
     1021 acttgcaaat tcaaaatatc ttattcctgc tccttcttgg aataaaaatt gaaaatacgc
     1081 agtaaaaaat gcgataagaa gataatattc tttagtttta aaggttttga taaaaatgag
     1141 tattaagccg actaaaaaaa ataaaaatcc taattcactc acaggtttaa aaaaatctaa
     1201 tgcaataaaa tgaaattcta aaccagcact attaaaagta gtatttctag gtaaaatgat
     1261 acttaaaatg cctataaaaa taagggttgt aattgaagcg atattttttt tatttaaaat
     1321 taaaacatga tgttttccaa cgcaaaatag agtaaaaatc ataggtaaaa ataaagctac
     1381 aaataaatta gcttgaaaaa aacttgtata aaaataaggc aacttggctc ctaatagcac
     1441 taaagttaaa aagaaaattt ttgaattttt aaagtaaaag gataatacaa gtgctgaaat
     1501 ttcaaaaata aaactcaatg atattaaaaa atctaataaa aacattatca aatccttgat
     1561 tttaataaaa gtgataattg tatagaaaaa agcttaaaag cggattttat ttaaatttag
     1621 caatttcatc ttgtatggtt tgttctatat ggagtaattc ttcatgagtt tttttgctat
     1681 tatctaaaag ttcatcaaat ttaaagccaa gcataacaat acgatataaa ttgggtttat
     1741 attttctcca attatataaa gtgctaacat caatgtctag ttcatatgcc atatcacgct
     1801 tgctcttttt tgtcattttt taccttaaaa atttagcctt taaaaaat
//
LOCUS       DAPIVO010000110         1790 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.112, whole genome shotgun sequence.
ACCESSION   DAPIVO010000110 DAPIVO010000000
VERSION     DAPIVO010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1790)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1790)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1790
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.112"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..546)
                     /locus_tag="RJ239_001755"
     CDS             complement(<1..546)
                     /locus_tag="RJ239_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HDV7331846.1"
                     /translation="MIRSLYYLKAMGFNFVDTHTNHFEQVQNFQELKQLVSSCTLCQF
                     SKTRKFSLMEPKIKNAKLLILDVFGQKSENESGILLNSKKGEKLKHYIYQILGLCDED
                     FYFSYLFKCFCNGKFDDFSLQSCLPFFWNELKLIQPAFLLCLGEYTFKSLGFKDYHIL
                     KGEVFAYKNFFIMPSYDLDFIE"
     gene            complement(543..1022)
                     /locus_tag="RJ239_001756"
     CDS             complement(543..1022)
                     /locus_tag="RJ239_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV7331847.1"
                     /translation="MSEFKIIDLRQEDLDILQEMIIEFAKYEDMLDFLQCTKEKLEHS
                     LLKNKFARAFLLKENEKTIGYMIYFYTFSSFWGSGGIYLEDIYIREDFRKKGYGKAVF
                     KFLGEICKKENLKRLDWVCLNDNILGINFYESLNAKHLKQWRNYRLSGENLEKLCDL"
     gene            1153..1287
                     /gene="rpmH"
                     /locus_tag="RJ239_001757"
     CDS             1153..1287
                     /gene="rpmH"
                     /locus_tag="RJ239_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HDV7331848.1"
                     /translation="MKRTYQPHGTPRKRTHGFRVRMKTKNGRKVINARRAKGRKRLAV
                     "
     gene            1284..1610
                     /gene="rnpA"
                     /locus_tag="RJ239_001758"
     CDS             1284..1610
                     /gene="rnpA"
                     /locus_tag="RJ239_001758"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HDV7331849.1"
                     /translation="MKNFDKFSTNEEFSSVYKVGKKWHCEGVIIFYLNSYEKKIAVVA
                     SKKVGKAVVRNRSKRILRALFAKFERYLQDGKYIFVAKNEITELSFSRLEKNLKWGLK
                     KLECFK"
     gene            1607..>1790
                     /gene="yidD"
                     /locus_tag="RJ239_001759"
     CDS             1607..>1790
                     /gene="yidD"
                     /locus_tag="RJ239_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HDV7331850.1"
                     /translation="MICLKILRFYQKFLSPLKPAACRYYPSCSEYALWQFQKKNFFLA
                     FFSTFFRILRCNPFFKG"
BASE COUNT          664 a          251 c          232 g          643 t
ORIGIN      
        1 ttctataaaa tctaaatcat aacttggcat tatgaaaaaa tttttataag caaaaacttc
       61 accttttaaa atgtgataat ctttaaatcc caagctttta aatgtatatt ctcctagaca
      121 aagtaaaaaa gcaggttgaa tcagttttag ttcgttccag aaaaatggta agcaagattg
      181 tagcgaaaaa tcatcaaatt ttccattaca aaaacattta aataaataag aaaaataaaa
      241 atcttcatcg caaagcccta aaatttgata aatatagtgt tttaattttt cacctttttt
      301 tgaattaagt aaaattccgc tttcattttc actcttttgc ccaaaaacat caagaattag
      361 caatttggca ttttttatct taggctccat aagactaaat tttcttgttt tggaaaattg
      421 gcataaggtg caagatgaaa caagttgttt taattcttga aaattttgta cttgttcaaa
      481 gtggtttgta tgtgtatcaa caaagttaaa tcccatagct tttaaataat aaagacttct
      541 tatcataaat cacataattt ttctaaattt tctccactta gacgataatt tctccattgt
      601 ttaagatgtt tagcgtttaa actttcataa aaattaatac ctaaaatatt atcatttaag
      661 caaacccagt cgagtctttt taaattttct tttttgcaaa tttctcctaa aaatttaaaa
      721 acagcttttc cataaccttt tttacgaaaa tcttctcgta tataaatatc ttcaagataa
      781 attccaccgc tgccccaaaa agacgaaaaa gtataaaaat aaatcatata gcctatagtt
      841 ttttcatttt cttttaacaa aaaagcacga gcaaatttat tttttagtaa agaatgttcc
      901 agtttttctt tcgtgcattg aagaaaatct aacatatctt cgtattttgc aaattctatg
      961 atcatttctt gtaaaatatc taaatcttct tgtcttaaat caataatttt aaattctgac
     1021 atttttaacc ttttaaaaat aatttcaaaa tttatcaaaa gaatttaaaa attactctta
     1081 atcaaaagca atttataagt aagattaaga taaaatacaa gtttatttta taatttttta
     1141 aggaaaaatc aaatgaaaag aacttatcag ccgcatggta ctccaagaaa acgcactcat
     1201 ggtttccgtg ttcgtatgaa aactaaaaat ggtcgcaaag tgatcaatgc aagacgcgct
     1261 aaaggtagaa aaagacttgc tgtgtgaaaa attttgataa atttagcaca aacgaggaat
     1321 tttcatctgt atataaagta ggcaaaaaat ggcattgcga aggtgtgatc attttttatc
     1381 tgaatagtta tgaaaaaaaa atagcagttg ttgctagtaa aaaagttgga aaagcagtgg
     1441 ttagaaatcg ttcaaaacga attttaagag ctttgtttgc taagtttgaa agatatcttc
     1501 aagatggcaa atatattttt gtagctaaaa atgaaatcac tgaactttct ttttctaggt
     1561 tagaaaaaaa tctaaaatgg ggattgaaaa aactagaatg tttcaaatga tatgcctaaa
     1621 aatactccgt ttttatcaga aattcttaag ccctttaaaa cccgctgctt gtaggtatta
     1681 tcctagttgt tctgagtatg cgctttggca gtttcaaaaa aagaattttt ttctagcttt
     1741 tttttctact ttttttagaa ttttaagatg caaccctttt tttaaagggg
//
LOCUS       DAPIVO010000111         1530 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.113, whole genome shotgun sequence.
ACCESSION   DAPIVO010000111 DAPIVO010000000
VERSION     DAPIVO010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1530)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1530)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.113"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            69..1493
                     /locus_tag="RJ239_001760"
     CDS             69..1493
                     /locus_tag="RJ239_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDV7331851.1"
                     /translation="MDFLTSLSEGGQFAIQIIIVLICLFYGAKKGGIALGLLGGIGIL
                     MLVFAFHIKPGKPAIDVMLTILAVVVASATLQASGGLDVMLQIAERILRRNPKFLTIL
                     APFVTCFLTILCGTGHVVYTIMPIIYDIAIKNGIRPERPMAAASISSQMGIIASPVSV
                     AVVSLTALLLNANHKLAGFDGYINLLQITIPSTLFGVLCIGIFSWFRGKDLDKDEVFQ
                     EKLKDPEFKKYVYGDSKTLLGVKLPKSNWVAMWIFLGAIALVALLGVFDFLRPNWGQV
                     VKNGIPQVDALGNPKMDVLSMVSVIQMFMLLAGSLIIIFTKTDAKKIGSNEIFKSGMI
                     ALVAVFGISWMADTMFAVHTPMMKAALGDIVKEHPWTYAVMLLLISKFVNSQAAAISA
                     FVPLALGIGVEPGVIVAFAAACYGYYILPTYPSDLATIQFDRSGTTHIGKFVINHSFI
                     LPGLIGVITSCIAGYFIAMAAGYL"
BASE COUNT          431 a          219 c          300 g          580 t
ORIGIN      
        1 tattctttaa tttaaaaatg tgatacaata ataactgttt ttaaatatta attttcaaag
       61 gagttaaaat ggacttttta acaagcctta gtgagggagg gcaatttgca atccaaatca
      121 ttatcgtttt aatttgtctt ttttacggtg caaaaaaagg cggcatagcg cttggtttac
      181 ttggtggtat aggtatttta atgcttgtat ttgcttttca tataaagcct ggaaaaccag
      241 ccatagatgt tatgcttaca attttagcgg tagtggttgc gagtgcaact ttgcaagcaa
      301 gcggtggttt ggatgttatg cttcaaatag cagaaagaat tttaagacgc aatcctaagt
      361 ttttaacaat attagcgcct tttgtaacct gctttttgac tatactttgt ggaacaggac
      421 atgtggttta tactattatg cctattattt atgatatagc gattaaaaac ggtattcgtc
      481 ctgagcgtcc aatggcggca gcttctatat catcacaaat gggtattatt gcatctcctg
      541 tatctgtggc tgttgtgagt ttgactgctt tgcttttaaa tgctaatcat aaattagcag
      601 gttttgatgg ttatattaat cttcttcaaa ttaccatacc tagtacatta tttggtgtat
      661 tgtgtatagg aattttttct tggtttagag gaaaagattt ggataaagat gaagtatttc
      721 aagaaaaact taaagatcct gaatttaaaa aatatgttta tggggattct aaaacacttt
      781 taggcgttaa acttccaaaa agcaattggg ttgcaatgtg gattttctta ggagctattg
      841 ctttagtagc tttattaggt gtatttgatt tcttgcgtcc aaactggggg caagttgtaa
      901 aaaatggcat tcctcaagta gatgctttag gcaatcctaa aatggatgtt ttatccatgg
      961 tttcagttat tcagatgttt atgcttttag caggttcttt gattatcatc tttactaaaa
     1021 cagatgcaaa gaaaatcggc tctaatgaaa tttttaaatc aggtatgata gcacttgttg
     1081 cggtttttgg aatttcttgg atggctgata ctatgtttgc agttcacact cctatgatga
     1141 aagcagcgct tggagatata gtaaaagagc atccttggac ttatgctgta atgcttcttt
     1201 taatttcaaa atttgtaaac tctcaagcag cggctatttc agcttttgtt cctttggctt
     1261 taggaattgg tgttgaacct ggtgtaattg ttgcttttgc ggctgcttgt tatgggtatt
     1321 atattttacc aacttatcca agcgatttgg ctactataca atttgataga tcaggtacta
     1381 ctcacatcgg taaatttgtt atcaatcata gttttatttt accaggtctt ataggtgtaa
     1441 tcacttcttg tatagcagga tattttattg ctatggcagc aggttatctt taacaatttt
     1501 tagcaggatt tttcctgcta aattcttcat
//
LOCUS       DAPIVO010000112         1441 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.114, whole genome shotgun sequence.
ACCESSION   DAPIVO010000112 DAPIVO010000000
VERSION     DAPIVO010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.114"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            96..>1441
                     /locus_tag="RJ239_001761"
     CDS             96..>1441
                     /locus_tag="RJ239_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HDV7331852.1"
                     /translation="MEKFIERLLEEDIKFEKDVNNGLSDINIFDALNIETKENYHSKF
                     IAYLIDINKDHYQKNFAKVFLEKLGKSLVNTKFENLNIEDIKSVETEACIKDNRRIDI
                     LITLSDKRYIIIENKIYAKDQKNQLKDYINFVRKNIKNIKDCYKNILTIYLHQDECAS
                     PSDYSLGNFTIKTNLIKDKNENNVSYYLKMDYIWIKEWIDECIKIYEEKSTKDQKFIL
                     DIQNIIFTLNQYKSILQWYMTDEYTQRDDVLEFIFQNNIKMQNLKNAMILYRYNKNKS
                     ELKNLNEENYKKAKDIIQHKWSNICEYIIEEFFDSFEHKEIKIGDITFIGNKIEENRV
                     NHGVFIFYPIDYKNESIYPCIYIYFKKKYYDIIGLTFEISNDDEEDIENEKYKECLKL
                     FKDVKEENVRKYQNHYYCDKLINNEKLEGEYAFIYWLIENQNSKKDFIQILNDFFI"
BASE COUNT          662 a           95 c          200 g          484 t
ORIGIN      
        1 acttaacttg cctataaaat taataatcag tttttttagt ttgtaattaa aaatttattt
       61 acatgtaaaa ttgtataaaa tttggaaagt gatacatgga aaaatttatt gaaaggttgc
      121 ttgaagaaga tattaaattt gaaaaagatg tgaataatgg tttgagtgat ataaatatat
      181 ttgatgcttt gaatattgaa acaaaagaaa attatcattc taaatttata gcttatttaa
      241 ttgatataaa taaggatcat tatcaaaaaa attttgcaaa ggtattttta gaaaaacttg
      301 gtaagagttt agtaaatacg aaatttgaaa atttaaacat agaagatata aaaagcgtag
      361 aaacagaagc ctgcataaaa gataatagaa ggatagatat tttaataaca ttaagtgata
      421 aaagatatat tataatagaa aataaaattt atgcaaaaga tcaaaaaaat caattgaaag
      481 attatattaa ttttgtaaga aaaaatatca aaaatataaa agattgttat aaaaacatat
      541 tgactatata tttgcatcaa gatgagtgtg ctagtcctag tgattatagt ttgggaaatt
      601 ttacaataaa gacaaatttg attaaagata aaaatgaaaa taatgttagc tattatttga
      661 agatggatta tatatggatt aaggaatgga ttgatgagtg tataaaaata tatgaagaaa
      721 aatcaaccaa agatcaaaaa tttattcttg atatacaaaa cattattttt actctaaatc
      781 aatacaaaag tattttacaa tggtatatga cagatgagta tactcaaaga gatgatgtac
      841 tagaatttat ttttcaaaac aatataaaaa tgcaaaattt aaaaaatgcg atgattttat
      901 atagatataa caaaaacaaa tcagagctta aaaatttaaa tgaagaaaac tataagaaag
      961 ctaaagatat tatccagcat aaatggagca acatctgcga atatataata gaagaatttt
     1021 ttgatagttt tgaacataag gaaattaaaa taggtgatat aacttttatc ggcaataaaa
     1081 tagaagaaaa tcgtgttaat catggtgtgt ttatatttta tcctattgat tataagaatg
     1141 aaagcatata tccatgtata tatatttatt ttaaaaaaaa atactatgat attattggtt
     1201 tgacatttga aatttcaaat gatgatgaag aagatataga aaatgaaaaa tataaagaat
     1261 gtttaaaatt atttaaagat gtaaaagaag aaaatgttag aaaatatcaa aatcactatt
     1321 attgtgataa attaataaac aatgaaaaat tagaaggaga atacgctttt atttattggt
     1381 tgattgaaaa tcaaaattct aaaaaagatt ttattcaaat tttaaatgat ttttttatta
     1441 a
//
LOCUS       DAPIVO010000113         1359 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.115, whole genome shotgun sequence.
ACCESSION   DAPIVO010000113 DAPIVO010000000
VERSION     DAPIVO010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1359
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.115"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(145..561)
                     /locus_tag="RJ239_001762"
     CDS             complement(145..561)
                     /locus_tag="RJ239_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HDV7331853.1"
                     /translation="MKAKLTLLALLGTTVLLAKDMVVPASELPNNAKEFISKNFKTAQ
                     IGLVKKDIDSYDVILNDGTEIDFMINGEWKEVDGKYKALPHTILPNVMKKVSATQPNA
                     QILEVDKEINGYKFKFNNNMEVYTDMQGNILGQKLD"
     gene            complement(625..>1359)
                     /locus_tag="RJ239_001763"
     CDS             complement(625..>1359)
                     /locus_tag="RJ239_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4261 domain-containing protein"
                     /protein_id="HDV7331854.1"
                     /translation="DLNHNFTSFVLLDEVDFNFSELKSILEDKFNIKIADENFTKEGV
                     IFSYENMLVTLNLINNPIPNHEVEYYANFNFMWKDALEQTKKHKAHLLIAVLSQDQSK
                     LEQAKMFTKIAALCLDNKHALGFYTGAVVLEPSFYIENAKMLDDNRLPVYNWIYVSVY
                     PSENGVNAYTYGLRNFDKLELEVCDLNIEEKELFFCIYDIVLHILTYDINLKDKDILK
                     FEDGKEIKFIKSQGISVENESLKIIF"
BASE COUNT          483 a          219 c          145 g          512 t
ORIGIN      
        1 ataaaaaaac aatcacttgt atcaatacag tattatttta aaactaaata tattttgagt
       61 tttgcaatca aaaaataaaa atttggaaga ctatgcttcc aaatttttgc atcaaatttt
      121 ctaagggagt taaattttca aaaattaatc taatttttga cctaggatat ttccttgcat
      181 atctgtataa acttccatat tgttattaaa cttaaattta taaccattaa tttctttgtc
      241 tacttcaaga atttgagcat ttggttgagt tgcactcact tttttcataa cattaggtaa
      301 gatagtatgt ggcaaagcct tatattttcc atcaacttct ttccactctc cattgatcat
      361 aaaatcaatt tcagttccat catttaaaat cacatcataa gaatctatat cttttttcac
      421 caaaccaatt tgagcggttt taaaattttt agaaataaat tctttggcat tatttggaag
      481 ttcgctagca ggaacaacca tatctttagc taaaagcacc gtagtaccca acaaagcaag
      541 taaagttagt tttgctttca taatttctcc tttttttctt ggttggcgaa agtttaactc
      601 aaaactgtga agtgaatgtg aaacttaaaa aataattttc aagctttcat tctcaacact
      661 tataccttga ctttttataa attttatttc ttttccatct tcaaatttta aaatatcttt
      721 atcttttaga ttaatatcat aagttaaaat atgcaaaaca atatcataaa tacaaaagaa
      781 aagttctttt tcttctatgt ttaaatcaca aacttcaagt tctaatttat caaaatttct
      841 aagcccataa gtataagcat taactccatt ttcactagga taaacactaa catatatcca
      901 attatatacc ggcaagcgat tatcatctaa catttttgca ttttctatat aaaaactggg
      961 ctctaaaaca actgcacctg tataaaaacc taaagcatgt ttattatcca aacataaagc
     1021 tgcaattttc gtaaacattt tagcttgttc taatttgctt tgatcttgac ttagcaccgc
     1081 tataagaaga tgagctttat gttttttagt ttgctctaag gcatctttcc acataaaatt
     1141 aaaatttgca tagtattcta cttcgtgatt aggtatagga ttgttaatca aatttagagt
     1201 aactaacata ttttcatatg aaaaaatcac gccctctttg gtaaaatttt catcagctat
     1261 ttttatatta aatttatctt ctaaaatgct ttttaactcc gaaaaattaa aatcaacttc
     1321 atcaagaaga acaaaagagg taaaattgtg atttaaatc
//
LOCUS       DAPIVO010000114         1337 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.116, whole genome shotgun sequence.
ACCESSION   DAPIVO010000114 DAPIVO010000000
VERSION     DAPIVO010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1337)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1337)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1337
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.116"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            87..1151
                     /locus_tag="RJ239_001764"
     CDS             87..1151
                     /locus_tag="RJ239_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDV7331855.1"
                     /translation="MKYPLDCEENFEKSFLFWLAKYVKFKLNSLSNKELKNPQALAEV
                     NFALTKGVKNIEELDALAKKARNAGLSGVNTYFNPLKKVFEYLNFYKLYSLKQIDEEL
                     IVEVLASVTGALSDASKKNYRIAVINFFDFLDKQNEEDEKAHIFDINLKNWAGIAGSK
                     GVKLPEFMSEEELKKFLDAIENADFKNNTIRNKLILKIIIFTGIRVSEAINIKMGDIS
                     EENDLYIIRIRAKGNKYRVVMIKKELIYDLLKNVSINYMSKDALLFVNKKGTPLTQSY
                     VSRIVEQLLFHAGIRKQKNGAHMLRHTFATLLYKKQKDLVLVQEALGHASLNTSRIYT
                     HFDNDKLKLAAQVAKELSDS"
     gene            1141..>1337
                     /locus_tag="RJ239_001765"
     CDS             1141..>1337
                     /locus_tag="RJ239_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aminodeoxychorismate synthase
                     component I/aminotransferase"
                     /protein_id="HDV7331856.1"
                     /translation="MILENYAVFGKYFYHDLKHALKAFNHKESKKCFKFIEKYKNDFY
                     VLILADYELYRYFQDKNFTSK"
BASE COUNT          529 a          174 c          200 g          434 t
ORIGIN      
        1 ctaaaaaagc ttttttttac taagttaata ctaaaatacc ttttctaatt aaaaagctaa
       61 aaatttatat tttaggaaaa gtttttatga aatacccttt agattgtgaa gaaaattttg
      121 aaaaatcatt tttattttgg ctggcaaaat atgtaaaatt taaactcaat tcgctatcta
      181 acaaagagtt aaaaaatcca caagctttag cagaagttaa ttttgccctt acaaaaggtg
      241 taaaaaacat tgaagaactt gacgctctag caaaaaaagc aagaaatgct ggtttaagtg
      301 gagttaatac ttattttaac cccttaaaaa aagtgtttga atatttaaat ttttacaagc
      361 tttactcttt aaaacagatt gatgaggaac tcattgtaga agttttagca agtgtaacag
      421 gtgctttatc agatgcaagt aaaaaaaatt accgtattgc tgtgattaat ttttttgatt
      481 ttttagacaa gcaaaacgaa gaagatgaaa aagcacatat ttttgatatc aatcttaaaa
      541 actgggcagg tatagcaggt tctaaagggg tgaaattacc cgaatttatg agtgaagaag
      601 agcttaaaaa atttcttgat gctattgaaa atgcagattt taaaaacaat accatacgca
      661 ataaacttat tcttaaaatc atcattttta caggcatacg ggtaagcgaa gctatcaata
      721 tcaaaatggg tgatattagc gaagaaaacg atctttatat cataagaata agagctaaag
      781 gcaataaata tcgtgttgta atgataaaaa aagaacttat ttacgattta cttaaaaatg
      841 taagtattaa ttatatgagt aaagacgccc tactttttgt caataaaaaa ggcactccac
      901 tgactcaatc ttatgtcagt cgtatagtag aacagctttt atttcacgca ggaattcgca
      961 aacaaaaaaa tggtgctcac atgttgcgtc atacttttgc caccctgctt tataaaaaac
     1021 aaaaagattt agttttagtt caagaagctt tagggcatgc aagtttaaat acttcaagaa
     1081 tttacactca ttttgataat gataaattaa aacttgccgc acaggttgca aaggaattaa
     1141 gtgattcttg aaaactatgc tgtttttggt aaatattttt accatgattt aaaacacgct
     1201 ttaaaagcct ttaaccacaa agaaagtaaa aaatgcttta aatttataga aaaatataaa
     1261 aatgattttt atgttttaat acttgctgat tatgagctat atagatattt tcaagataaa
     1321 aatttcacaa gcaaaaa
//
LOCUS       DAPIVO010000115         1297 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.117, whole genome shotgun sequence.
ACCESSION   DAPIVO010000115 DAPIVO010000000
VERSION     DAPIVO010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1297)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1297)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.117"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(7..1266)
                     /locus_tag="RJ239_001766"
     CDS             complement(7..1266)
                     /locus_tag="RJ239_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002860149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HDV7331857.1"
                     /translation="MTLLCLFRFNVLLSLLISALVAGVFSHLELVDTMNILISGMKEN
                     LKTALSYILLGAIAAAISKTNLTAYLIKIVSHFISHKKYLLLLSIALISCFSQNLIPI
                     HVAFIPLLIPPLLSLFNKLKIDRRAVACALTFGLTTPYMVLPVGFGLTFQDLLKDNLN
                     ANNVSASLNDVTNTMYFAAICMIAGLFLALFVFYRKPREYQEVEIAKVDLENLEMTRK
                     EWGVLAGLVLTLILQILTMNLPLSGLLGFVLMVILGGVEFSKVNEVFDDGLKMMGFIA
                     FVILVAAGYGEVLKESGSVVDLVNSVVPWMEQSKFLAVFFMLLIGLIITMGIGTSFGT
                     IPIIATLFCPICLELGFSTALIIFILGVAGALGDAGSPASETTMGTTVGLNADKQHDH
                     IKDTCIPTFIFYNGPLLILGSIIAMFL"
BASE COUNT          522 a          240 c          174 g          361 t
ORIGIN      
        1 caaaaattat aaaaacatgg cgataatact acctaaaatc aataatggac cattataaaa
       61 aataaaagtt ggtatgcaag tatctttaat gtgatcgtgt tgtttatcag catttaatcc
      121 tacagtagtt cccatggttg tttcactggc tggacttcct gcatctccta aagctcctgc
      181 tactcctaag ataaatataa taagtgctgt actaaaacca agctccaaac aaataggaca
      241 aaaaagcgta gctatgatag gtatagttcc aaaagaagta cctataccca tagtgatgat
      301 aagtcctatt aaaagcatga aaaatactgc taaaaattta ctttgttcca tccaaggaac
      361 gactgaattt acaagatcta ctactgatcc actttctttt aaaacttctc catatcctgc
      421 agcaacaagg ataacaaaag ctataaaacc catcatttta agcccatcat caaaaacttc
      481 attgactttt gaaaattcaa ctccacccaa aataaccatt aaaacaaaac ccaaaagccc
      541 tgataaaggt aaattcatag tcaaaatttg caaaattaaa gttaaaacaa gcccagctaa
      601 aacgccccat tccttacgcg tcatttcaag attttctaaa tccactttag caatttctac
      661 ttcttgatac tctcttggct tacgataaaa cacaaaaagc gctagaaaaa gtcctgctat
      721 catacaaata gcagcgaaat acatagtatt tgtaacatca tttaaagatg cacttacatt
      781 atttgcattt aaattatctt ttaaaagatc ttgaaaagta agcccaaaac ctactggcaa
      841 aaccatataa ggcgtagtaa gtccaaaagt taaagcacaa gcaaccgctc tacgatcgat
      901 tttaagttta ttaaaaagac ttaaaagagg tggaatcaac aaaggtataa aagctacatg
      961 aataggaatt aaattttgag aaaaacaaga aatcaaagct atagacaaaa gcaataaata
     1021 ttttttatga gatataaaat gacttactat cttaatcaaa tatgcagtta aatttgtctt
     1081 tgaaatcgct gcggcaatgg cccctaaaag tatatagcta agagctgttt ttaaattttc
     1141 tttcattccg cttataagta tattcatagt atctacgagt tcaagatgag aaaatacacc
     1201 tgcaacaaga gctgagatca aaagactcaa aagtacatta aaacgaaaca aacaaagtaa
     1261 agtcatcaaa acaacactga taatgatagg attagta
//
LOCUS       DAPIVO010000116         1271 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.118, whole genome shotgun sequence.
ACCESSION   DAPIVO010000116 DAPIVO010000000
VERSION     DAPIVO010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1271)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1271)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1271
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.118"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            53..>1271
                     /locus_tag="RJ239_001767"
     CDS             53..>1271
                     /locus_tag="RJ239_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2972 domain-containing protein"
                     /protein_id="HDV7331858.1"
                     /translation="MQNLLLYIKNNLTPTLAQILLQALKNSNNEKFFTFVLENIETIC
                     TWLNSSEFKNRYLSIKHPYPPLINPNFIEIDASRHCAELAWDLNLPLPKHYKFIYISP
                     HGVGAAAFLRYLNQCCDVTCFASWVLPPDSKERYCINYMCLNDNTITQYAINISEINL
                     PYFDKYLSLLDFNSKIICGVRDPIGILKHNWGRDWSKVLRNYPSEFNLTYDWRYYIDY
                     LAHQNHKIKIDINELQQGVFIISYLLKYFNKDNVYYLDMEEIRQSKAFDTMNLLAINF
                     NFTPPHKDKLDLFKIKEFRGYIRYLFPITLYANSKDINNTFYLNTPKNNKNFNIDKTS
                     SIPIILDRKHINHEKIDIIQEIIKNDLCNDMGVYIDKNDFKQLEQNNLLFSTIKHYLY
                     DFLYQIKITIDETE"
BASE COUNT          493 a          187 c          140 g          451 t
ORIGIN      
        1 atttaaatat ttatgaatta tatataaatt aaatacaatt aaaagaggtt atatgcaaaa
       61 tcttttactc tatataaaaa ataacctaac tccaacccta gctcaaattc ttttacaagc
      121 tttaaaaaat tcgaataatg aaaaattttt tacctttgtt ttggaaaata ttgaaacaat
      181 ttgcacttgg ctcaattcta gcgaatttaa gaatagatat ttatcaataa aacatcctta
      241 tccaccttta atcaatccta attttataga aatagatgct agtcgacatt gtgcagaatt
      301 agcttgggat ttaaatttac ccctacctaa acactataaa tttatctata tttctccaca
      361 tggcgttgga gcagcagcat ttttaagata ccttaatcaa tgttgcgatg taacttgttt
      421 tgcctcctgg gttttaccac ctgatagcaa agagagatat tgtattaatt acatgtgtct
      481 aaatgacaat acgattactc aatatgctat taatatatca gaaattaatc taccttattt
      541 tgataaatat ctatctttat tggattttaa ctctaaaatt atttgcggag ttcgcgatcc
      601 aataggaatt ttaaagcata actggggaag agattggagt aaagttttaa gaaactatcc
      661 ctctgaattt aatctaactt atgattggcg ttattatatt gactatcttg ctcatcaaaa
      721 tcataaaatt aaaatcgata taaacgaact acaacaagga gtttttatca tctcttattt
      781 attaaaatat tttaacaaag acaatgtata ctatcttgat atggaagaaa tccgccaatc
      841 aaaggccttc gatactatga atttacttgc tataaatttt aattttaccc ccccccataa
      901 agataaatta gatttattta aaattaaaga atttagaggt tatattcgct atctttttcc
      961 tatcacactc tatgcaaatt ctaaagatat taataacacc ttttatctta atactcctaa
     1021 aaataataaa aatttcaata ttgataaaac ttctagcatt cccataattt tagacagaaa
     1081 acatatcaat catgaaaaaa tagacataat acaagaaatt ataaaaaacg atctatgtaa
     1141 tgatatgggt gtatatattg ataaaaatga ttttaaacaa ttagaacaaa acaatctttt
     1201 attttcaaca attaaacatt atttgtatga ttttttatat caaattaaaa taaccataga
     1261 tgaaacagaa t
//
LOCUS       DAPIVO010000117         1251 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.119, whole genome shotgun sequence.
ACCESSION   DAPIVO010000117 DAPIVO010000000
VERSION     DAPIVO010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1251)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1251)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.119"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..1204)
                     /locus_tag="RJ239_001768"
     CDS             complement(<1..1204)
                     /locus_tag="RJ239_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HDV7331859.1"
                     /translation="MNFRSLNLSTKLILSVAIGIVLGIVVIVLTVSIYTSKSMEKEAK
                     DSIFLSSKRYVNYMEGILNEEVVLTKAMATSLNEIFSKNDQVNAGIIESLLRNTFDSS
                     GYAAYAFLYLQDSSILTHVESLDKNFKNSDGKSVTMIFFDETTGKAGGIKSIHAPSNF
                     SQLPIIEKIKKNARYGDLDTIFLGSPSRLNYDGTEFLGINLGMPLFNKEGKFIGIVGF
                     TFDFLEISETILDPKLDFYKDDLRFLITDQGVIVIHKNKDAILKTLPEINQDASVQLI
                     IDAVKNHKDLIIDNYVDLSGNLSYAGVASFSTLGDSSHWSMVVTAPKKSIFAPLYELN
                     FILISIAIIVLIAILIILYFCVKNIVGSKLPIIVNSLQNFFDFINHKTKNVSTIEVKS
                     NDELGQMGK"
BASE COUNT          448 a          195 c          145 g          463 t
ORIGIN      
        1 ttttacccat ttgccccaat tcatcattgc tttttacttc tatagtagaa acattttttg
       61 ttttatggtt gataaagtca aagaaatttt gcagggaatt aactataatt ggaagtttag
      121 atcctactat attttttaca caaaaataca gaataattaa aatagcaatt aatacaataa
      181 ttgcaatact aattagaata aaattcaatt catataaagg cgcaaaaata gattttttag
      241 gtgctgttac aaccatgctc caatgactcg aatctcctaa ggtactaaat gaagcaactc
      301 ctgcatagct taaatttccg cttaagtcaa cataattatc aataatcaaa tctttatgat
      361 ttttaacagc atcaataatt aattgcacgg atgcatcttg attaatttca ggtaaagttt
      421 ttaaaatagc atctttgttc ttatgaataa caataacacc ttgatctgtt attaaaaatc
      481 ttaaatcatc tttataaaaa tctaacttcg gatcaagtat tgtttcagat atttctaaaa
      541 aatcaaaagt aaatccaact ataccgataa attttccttc tttattaaat aagggcattc
      601 ctaagttaat acctaaaaat tctgttccat cataattaag tcttgatgga gatcctaaaa
      661 atatagtatc aagatcacca tatcttgcat tttttttaat tttttctata ataggtagtt
      721 gtgaaaaatt gctcggagcg tgtatgcttt taataccgcc tgccttccct gtggtttcat
      781 caaaaaaaat cattgttaca cttttgccat cagagttttt aaaattttta tctaaagatt
      841 caacatgagt tagtatagaa gaatcctgta aataaagaaa agcataagct gcataaccgc
      901 tactatcaaa tgtatttctt aaaagacttt ctattatacc agcgttcact tgatcatttt
      961 ttgaaaatat ttcatttaat gaagtggcca ttgcttttgt taatacaacc tcttcattta
     1021 aaataccttc catgtaattg acatatcttt ttgaagacaa aaatattgaa tctttagctt
     1081 ctttttccat acttttagaa gtatatatag atacggttaa aacaattaca actatgccta
     1141 agactattcc tattgctaca gataaaataa gcttagtact taaatttaga gaacgaaaat
     1201 tcatattttt cctttttgtg agcttttaaa tttttacaat aaaatttcag a
//
LOCUS       DAPIVO010000118         1144 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.120, whole genome shotgun sequence.
ACCESSION   DAPIVO010000118 DAPIVO010000000
VERSION     DAPIVO010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.120"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(24..1121)
                     /locus_tag="RJ239_001769"
     CDS             complement(24..1121)
                     /locus_tag="RJ239_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HDV7331860.1"
                     /translation="MKTSFLAHSVAIVRSNFKGLLFTACIVIFAMYLSSVQSIKDTTH
                     LAATAFAIIIGVLLSPWFFKYQHHFQAGVHFSAKKLLRLGIVLYGFNITLTELLSVGL
                     KGFLLSAIVIFFVFIIALFVGTKIFKLDKETSMLVGAGSAICGAAAVLALESSLKSDP
                     FKGILAVGTVVIFGLVFMFLYPIAFSLNLFPFFDQNAMGVFMGATLHEVANVAGAAEM
                     AKDMAGFEQGASNVAVIIKMMRVILLVPFLLIVTYFFAKNQHSSSGKTAKSITIPYFA
                     FAFLGMIVLNTYLASKESILGIATSDIISLGKTLCTLCIVFAMAALGLQIDFKKFLKS
                     GSRVFGLAFVLGLVLIFGGYFLTLAFKGILW"
BASE COUNT          459 a          230 c          143 g          312 t
ORIGIN      
        1 tctaaaataa aaaataattt ttattaccaa agtatacctt taaaagctaa ggttaaaaaa
       61 tatcctccaa aaatcaaaac aagccctaaa acaaaagcca agccaaatac cctagagcca
      121 ctttttaaaa attttttaaa gtcaatttgc aagcctaaag ctgccatagc aaaaacgata
      181 cataaagtac aaagtgtttt acctaaagag atgatatcgc tcgtagcaat acctaaaata
      241 ctttctttgc ttgctaaata agtatttaaa actatcatgc ctaaaaatgc aaaagcaaaa
      301 taaggtatag tgatactttt tgcagttttt ccactgcttg aatgttgatt tttagcgaaa
      361 aaataagtca ctataagcaa aaaaggcaca agtaaaatca ctctcatcat ttttataatc
      421 actgcaacat tagaagcacc ttgctcaaat cctgccatat cctttgccat ttcagcagca
      481 cctgcgacat ttgccacctc atgcaacgta gctcccataa aaacacccat agcattttga
      541 tcaaaaaaag gaaaaagatt taaagaaaaa gctatgggat ataagaacat aaatacaagt
      601 ccaaaaatca ccaccgtacc tacagctaaa attcccttaa aaggatcact tttcaaactt
      661 gactctagtg ctaaaaccgc tgccgcaccg caaatcgcac ttccagctcc aacaagcata
      721 gaagtttctt tatcgagttt aaaaattttc gttcccacaa ataaagcaat aataaaaaca
      781 aaaaatatca ctatagcaga aagcaaaaat cctttcaatc ctacacttaa aagctcagtt
      841 aaagtgatat taaaaccata taaaacaatg ccaagtctta aaagtttttt cgcactaaaa
      901 tgcactccgg cttgaaaatg atgttggtat ttaaaaaacc aaggagaaag caacactcct
      961 atgataatag caaaagcagt cgctgctaaa tgagtggtat ctttgatact ttgaacacta
     1021 gaaagataca tagcaaaaat cactatacaa gcagtaaaaa gcaaaccctt aaaatttgat
     1081 cgcactatag ccacgctatg tgctaaaaaa cttgttttca tttattttcc tttttgtaaa
     1141 tttt
//
LOCUS       DAPIVO010000119         1079 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.121, whole genome shotgun sequence.
ACCESSION   DAPIVO010000119 DAPIVO010000000
VERSION     DAPIVO010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1079)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1079)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.121"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..261)
                     /locus_tag="RJ239_001770"
     CDS             complement(<1..261)
                     /locus_tag="RJ239_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HDV7331861.1"
                     /translation="MLTLENKFQSIATGPVAALESIKHLGTNGGGFFGTNSSMPFENP
                     TLLTNFLQILSMMLIPSACVVAFGLMVYHRKEIQGFALMGKEE"
     gene            complement(283..354)
                     /locus_tag="RJ239_001771"
     CDS             complement(283..354)
                     /locus_tag="RJ239_001771"
                     /inference="COORDINATES: protein motif:HMM:NF015753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331862.1"
                     /translation="MITRLMLPLSFILAVIFISEGVV"
     gene            complement(339..560)
                     /locus_tag="RJ239_001772"
     CDS             complement(339..560)
                     /locus_tag="RJ239_001772"
                     /inference="COORDINATES: protein motif:HMM:NF015753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HDV7331863.1"
                     /translation="MNLNTVISFITNTNLQHYSGENALSLLSQNTGILLAMFVSSASG
                     YSACMAFCRALCSMQMGNFMKILRVLLRV"
     gene            complement(594..854)
                     /locus_tag="RJ239_001773"
     CDS             complement(594..854)
                     /locus_tag="RJ239_001773"
                     /inference="COORDINATES: protein motif:HMM:NF015753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HDV7331864.1"
                     /translation="MLEILITLIIAFILALIFGNYLYKIASCKKTIFDFIFNPIDNLI
                     YKICAIDRKNMTWQKYSLHLIAFNALVAIFSFVIFYLQDKLF"
     gene            complement(864..1050)
                     /gene="kdpF"
                     /locus_tag="RJ239_001774"
                     /pseudo
     CDS             complement(864..1050)
                     /gene="kdpF"
                     /locus_tag="RJ239_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344095.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
BASE COUNT          445 a          178 c          133 g          323 t
ORIGIN      
        1 ttcttctttt cccataagag caaaaccttg tatttctttt ctatgataaa ccatcaatcc
       61 aaaagctaca acacaggcac taggaataag catcatggat aaaatttgca aaaaatttgt
      121 aagtaaagta ggattttcaa aaggcatgct tgaattagta ccaaaaaaac cacccccatt
      181 tgtccctaaa tgttttatag actcaagagc tgcaacagga cctgtggcaa tgctttgaaa
      241 tttattttct aaagtaagca cgctaaaatt tgcgtgataa ttttacacca cgccttcaga
      301 gataaaaatt acagccaaaa taaaacttaa aggcaacatc aaacgcgtaa taatacgcgt
      361 aaaatcttca taaaatttcc catttgcata ctacataaag cacgacaaaa agccatacaa
      421 gcagaatatc cactcgcact tgaaacaaac atagcaagca aaatgcctgt attttgcgaa
      481 agcaaactta aagcattctc tccactataa tgctgaaggt ttgtatttgt aataaaacta
      541 attacagtat ttaaattcaa atccccttat catagaattt atcgaattgg gatttaaaaa
      601 agtttatctt gtaaataaaa aatcacgaaa gaaaaaatag ccactaaggc attaaaagca
      661 attaaatgca aagaatattt ttgccaagtc atattttttc tatcaattgc acaaatttta
      721 taaattaagt tatcaattgg attaaaaata aaatcaaaaa tagttttttt acagcttgca
      781 attttataaa gataatttcc aaaaattaaa gccaatataa aagctataat cagtgttatt
      841 aaaatttcta gcatattttt cctttaaaat ttttcaggat ataatagagc ataaaataaa
      901 taaagagcaa gtattaagct taaaactagt aaaaatatca tccgcgtgtc ctagtttgaa
      961 tttcacaaaa acggataaaa aacataaact actaaaagct aaaagtagaa gcaaagcaaa
     1021 gataatatcc ataggatagc cttttctcat tgattcaaaa taggatttat tctatcctt
//
LOCUS       DAPIVO010000120         1066 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.122, whole genome shotgun sequence.
ACCESSION   DAPIVO010000120 DAPIVO010000000
VERSION     DAPIVO010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1066)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1066)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.122"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..682
                     /locus_tag="RJ239_001775"
     CDS             <1..682
                     /locus_tag="RJ239_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="class I SAM-dependent DNA methyltransferase"
                     /protein_id="HDV7331865.1"
                     /translation="NLNLLKNEKILLKPIFESDNIQKYFVKRYNYFWVIYTNSSFKNP
                     NSMDNYPNLKKHLDKFQNVITSDNKPYGLHRARDEKFFTGSPRIVALRKCVGEPKFSY
                     VDFDCYVSATFYVIKTQRINVKYLTAILNSKLIAFWLKHKGKMQGNNYQIDKEPLLNI
                     PIVTINSKNQKIADELINLVDEILKVKEQDKNANTQELENKINSLVYKLYDLTEEEIK
                     IIENKEQK"
     gene            679..>1066
                     /locus_tag="RJ239_001776"
     CDS             679..>1066
                     /locus_tag="RJ239_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331866.1"
                     /translation="MKLKLNLENCYGIGKLQKEFDFSDKNVLLFYAQNGTFKTSFAKT
                     FKNIKDDKQIKDEIFPERISKAYIEFNGEKINKEDIFVFDSYDREFDSSKSVTTFMAS
                     PKLKKEYDEIFSELDKQKKSLLKSLKK"
BASE COUNT          459 a          113 c          145 g          349 t
ORIGIN      
        1 aaatttaaat cttttaaaaa atgaaaaaat acttttaaaa ccaatttttg aaagcgataa
       61 tatacaaaaa tattttgtaa aaagatataa ttatttttgg gttatttata caaattcatc
      121 ttttaaaaat ccaaattcta tggataatta tccaaatttg aaaaaacatt tagataaatt
      181 tcaaaatgtt atcacttctg ataataaacc ttatggtttg caccgagcaa gagatgaaaa
      241 attttttaca ggaagtccta gaatagtagc acttagaaaa tgcgtaggtg agcctaaatt
      301 tagctatgtt gattttgatt gttatgtgtc agcgactttt tatgtgatta aaactcaaag
      361 aattaatgtt aaatatttaa ctgctatttt aaattcaaag cttatagcat tttggttgaa
      421 acataaagga aaaatgcaag gcaataatta tcaaattgac aaagagcctt tactaaatat
      481 ccctatagta actataaatt ccaaaaatca aaaaatagct gatgagctta taaatttagt
      541 cgatgagatt ttaaaagtca aagaacaaga caaaaacgca aacacccaag aactagaaaa
      601 caaaatcaat tctttggttt ataaacttta cgatctcacc gaagaagaaa taaaaatcat
      661 tgaaaataag gagcaaaaat gaaattaaaa cttaatttag aaaattgtta tggcataggg
      721 aagttgcaaa aagagtttga tttttcagat aaaaatgttt tattatttta tgctcaaaat
      781 ggtactttta aaacttcttt tgcaaaaaca tttaaaaata ttaaagatga taaacaaatt
      841 aaagacgaaa tatttccaga aagaatatca aaagcctata ttgaatttaa tggtgaaaaa
      901 attaataaag aagatatttt tgtttttgat tcttatgata gagaatttga ttcttctaag
      961 agtgtaacta cttttatggc tagccctaaa ctgaaaaaag aatatgatga aattttttca
     1021 gaattggata agcaaaagaa aagtttatta aagagtttga aaaaat
//
LOCUS       DAPIVO010000121         1034 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.123, whole genome shotgun sequence.
ACCESSION   DAPIVO010000121 DAPIVO010000000
VERSION     DAPIVO010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1034)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1034)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.123"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(188..1034)
                     /locus_tag="RJ239_001777"
                     /pseudo
     CDS             complement(188..1034)
                     /locus_tag="RJ239_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344804.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
BASE COUNT          367 a          131 c          123 g          413 t
ORIGIN      
        1 ttttatcaat tgtaaaataa aactcttttg cgtcaagaat tttatataaa tctttaacat
       61 taggtctacc tatagaataa gaataatata gtataggaaa tctaaaattg gcgacattat
      121 tcatatgtac atttttcatt tcataatcta tttgctccca aattttagga ttattaatat
      181 ggtttaaggc tgttttcaaa atactaatag gatctcttgc aataaaaata atatctgaaa
      241 ccttggaata taaatacaaa agtttattat tcatatgctc gcaatcatga taaaaatcat
      301 acataaatgg tggaatgact gcaatagaac aagtagtgtt atttatgtaa taatacatat
      361 ctttatacat tattttacct gttaaagctg ggtgtgcatc agctgctata ttgcaatatt
      421 taaaaaatcg atacattgca tttgaaccac tacaacaact aaaaaaccac ataaactcat
      481 atctatccgg taaaggtaaa ttcatctccc aagcaagttc agcaggtatg ttatgataat
      541 tgattttttc attttcatca tttaattttt taggatcaag tagtgaagga taaggatgat
      601 tttctttttt atatttttct ttgaaatcat ctgataatag ccattcttct ataagatcaa
      661 aattttgcat aaaataatta aaattatgaa aaatattatt cattataggt tgataatttt
      721 gatgtgtttt taagatattt tttattcttg gaaattcttt taggaataat tgtttattat
      781 cttgaatagc ttttaaagtt tcaccattta attctttaaa ttcttttaga atttctctaa
      841 aaatttgaaa ttctttattt gcttttttaa tattattttt taatttaaat ccacctcctt
      901 tataccaatt ctgataagcc ttaattaaaa cttcacctat catgtaagat aaatggaatt
      961 tacatcttaa agcttcatta taatcagaac atgtttctaa acttgggtat ttaagttggg
     1021 gaaagacttg tatg
//
LOCUS       DAPIVO010000122          983 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.124, whole genome shotgun sequence.
ACCESSION   DAPIVO010000122 DAPIVO010000000
VERSION     DAPIVO010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 983)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 983)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.124"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            116..>983
                     /locus_tag="RJ239_001778"
     CDS             116..>983
                     /locus_tag="RJ239_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDV7331867.1"
                     /translation="MKTVGVVIPIYNVEKYLRECLDSVVNQTYKNLQVVLVNDGSTDE
                     NSLNIAKEYTLKDERFILFDKENGGQSTARNVGIEFFSKEYDFKNITQELKENSLVEF
                     KLDNEDNPYNIYKIYKSSNFFKNKDELLNFKAPDIDYIIFLDSDDYWELNCIEECVPR
                     MDGVEVVWFDSCSIFEEGFKKQWSSLLKLYDLHEGVIKSKVWLEYSINKKIYNFYFTW
                     SGMIDFIYLKNIKLKFIDYIIHQDHHFGMLLFAKCKYIYIFPSSMHTYRIRSNSTINL
                     SDSELQIHIPRYM"
BASE COUNT          373 a           89 c          165 g          356 t
ORIGIN      
        1 ttttggagct aaagttgatt tgatcatagc caatcgtttt gatgataagc ttaaagagat
       61 taaagataaa gttttttcag cagatgtatt ttatactgat atttaggaaa ttactgtgaa
      121 aactgtaggt gtagttatcc caatctataa tgtagaaaaa tatttaagag aatgtttaga
      181 tagtgttgtc aatcaaactt ataaaaattt acaagttgta cttgtaaatg atggtagtac
      241 agatgaaaac tcgcttaata tagccaaaga atatacttta aaagatgaaa gatttatact
      301 ttttgataag gaaaatgggg gacaaagtac agcaagaaat gttggcatag aattctttag
      361 taaagaatat gattttaaaa acattaccca agaattaaaa gaaaactctt tagtagaatt
      421 taaactagac aatgaagata atccttataa tatttataaa atatataaaa gttcaaattt
      481 ctttaaaaac aaagatgagc ttttaaattt taaagcccct gatattgatt atattatctt
      541 tttagattct gatgattatt gggaattaaa ttgcatagaa gaatgtgttc ctagaatgga
      601 tggggttgag gtggtttggt ttgacagttg tagtatattt gaagaaggat ttaagaaaca
      661 atggagtagt ttgttaaaat tatatgattt acatgagggg gttataaagt ctaaagtttg
      721 gttggagtat agtataaaca agaaaattta taatttttat ttcacttggt cgggtatgat
      781 tgattttatt tatttaaaaa acattaagct taaatttatt gattatatta ttcatcaaga
      841 tcatcacttc ggcatgttat tatttgccaa atgtaaatat atttatattt ttccatcatc
      901 gatgcatact tatagaataa gatctaatag tacaattaat ttaagtgata gtgaactaca
      961 aattcatatt ccaagatata tgc
//
LOCUS       DAPIVO010000123          942 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.125, whole genome shotgun sequence.
ACCESSION   DAPIVO010000123 DAPIVO010000000
VERSION     DAPIVO010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 942)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.125"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..>942
                     /locus_tag="RJ239_001779"
     CDS             <1..>942
                     /locus_tag="RJ239_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HDV7331868.1"
                     /translation="FYHCFCQRRSDVEKYSTLADFTKDDLKLIEKVLRKYNIPCDQLA
                     NNTVVSHCEYLSEIMTELKMLNRLPYDFEERLSATFIPSRGEYQNFGIMAAIDHINAL
                     KDLVKRFPKLADLPKIYGGGSYGGYLALLIAKIAPWYVDGVIDNSGSAVPPLNYIIGR
                     ELEFKSKDTNGDMYMQGDHFFVSCFLKTHWTRKENSPYFFNNENYFIRTLLNKDHLIL
                     QSQKNKNIIYVSYHSKEDPLTPANFKELTMQILKILGYDVSLNLIDENKIDGKFIKNL
                     DHGCGIPDKALFRKELPLMLEKLQGRKSFMQENSISYP"
BASE COUNT          338 a          117 c          165 g          322 t
ORIGIN      
        1 ttttatcatt gtttttgtca aaggcgttcg gatgttgaaa agtattcaac attagcagat
       61 tttacaaaag atgatttaaa attaatagaa aaagtgcttc gtaaatacaa tattccatgt
      121 gatcaattag ccaataatac tgtagttagt cattgtgaat atttgagcga gattatgaca
      181 gaattaaaaa tgttaaatcg attgccttat gattttgaag aaagactaag tgcaactttt
      241 attccttcgc gtggagaata tcaaaatttt ggcattatgg cagctattga tcatatcaat
      301 gctttaaaag atctagttaa acgctttcca aaacttgcag atttaccaaa aatttatggg
      361 ggggggtctt atggaggata cttagccttg ctcatagcaa aaatagctcc ttggtatgtg
      421 gatggcgtga ttgataattc gggttcggct gttccaccgc ttaattatat tattggtaga
      481 gagttggaat ttaaaagcaa agatactaat ggggatatgt atatgcaggg cgatcatttt
      541 tttgtgagtt gttttctaaa aacccactgg acgcgtaaag aaaattcacc ttattttttt
      601 aataatgaaa attattttat tagaacattg ttaaataagg atcatttgat tttgcaaagt
      661 caaaaaaata aaaatattat ttatgtgagt tatcatagta aagaagatcc tttaactcca
      721 gcaaatttta aagaactaac catgcaaata ttaaaaattt taggttacga tgtaagctta
      781 aatttgatag atgaaaataa aattgatgga aaatttatta aaaatttaga tcatggttgt
      841 ggtatacctg ataaagcctt atttagaaaa gaacttcctt taatgcttga aaaactacaa
      901 ggaagaaaat ctttcatgca agaaaattcc atctcttatc ct
//
LOCUS       DAPIVO010000124          923 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.126, whole genome shotgun sequence.
ACCESSION   DAPIVO010000124 DAPIVO010000000
VERSION     DAPIVO010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 923)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 923)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..923
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.126"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..443)
                     /locus_tag="RJ239_001780"
     CDS             complement(<1..443)
                     /locus_tag="RJ239_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDV7331869.1"
                     /translation="MGFRINTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADD
                     ASGMAIADSLRSQANTLGQAISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQD
                     GQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNFINQEF"
     gene            complement(540..>923)
                     /locus_tag="RJ239_001781"
     CDS             complement(540..>923)
                     /locus_tag="RJ239_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7331870.1"
                     /translation="SDKLLVKFKEKIQKDQDNAKRFLDDALALKQILENILSKDFILP
                     LEFLEKVYQNIENFNHSLDEDEFIQDETLRGAFAYRGKLISDVLKLHIQDKTHFITAY
                     IKAYHEWLLYFMEKLEQKYKSLSKV"
BASE COUNT          294 a          149 c          127 g          353 t
ORIGIN      
        1 tgaaattctt gattgataaa atttccactt aaaagttgtt taccgttaaa tgaagtagta
       61 tttgcgatat tgtcaagttc ttccattaaa cggttgatat ctgcttgaag catagttctt
      121 gtttttaaac tttgtccatc ttgagccgct tgagttgcct tagttttaat agtatctaag
      181 attttaagtt gctcatccat agccttatca gcagtttgta agatacctaa agcatcgtta
      241 ccattagata tagcttgacc taaagtatta gcttgagatc ttaaactatc tgctatcgcc
      301 atccctgaag catcatctgc tgcggagttg attctaagac ctgaactaag tctgcttaaa
      361 gaagcatcta aacttttact atttaaatca gcgtttgctt tagcatttaa agctgcaaca
      421 ttggtgttaa tacgaaatcc cattttaaat ccttttaaaa aaattcaagc tcatccatga
      481 acttgttaaa taccatatcg tgcaatcaaa aaaatatttt atactttagc aataaaattt
      541 catacttttg acaaagactt gtatttttgt tctaattttt ccataaaata aagcaaccat
      601 tcatggtaag ctttgatata ggctgtgatg aaatgcgttt tatcttgtat atgaagtttt
      661 aatacatcgg aaattaattt tccacgataa gcaaaggctc ctcttaaagt ttcatcctgt
      721 ataaactcat cttcatctaa agagtgattg aaattttcta tattttgata aactttttct
      781 aaaaattcca aaggcaagat aaaatcttta ctgagtatat tttctaaaat ttgttttaaa
      841 gctaaagcat cgtctaaaaa tcttttagca ttatcttgat ctttttgtat tttttctttg
      901 aatttaacta ggagtttatc act
//
LOCUS       DAPIVO010000125          918 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.127, whole genome shotgun sequence.
ACCESSION   DAPIVO010000125 DAPIVO010000000
VERSION     DAPIVO010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 918)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 918)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..918
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.127"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..449)
                     /locus_tag="RJ239_001782"
     CDS             complement(<1..449)
                     /locus_tag="RJ239_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331871.1"
                     /translation="MNKIEVFLQNLNPREKFLFISFICLCALFLAFKIHDRFLEDIFQ
                     KTLVEHNYLALNEAKIENSHLKEIETKLTKQIKTEEEKLKYYKEKLHLFFYDKDFFNK
                     KINNLSKNLTINEIKFSQENKNFIHYNYVFLSLNGNFKDLLNFIQNL"
     gene            complement(442..>918)
                     /locus_tag="RJ239_001783"
     CDS             complement(442..>918)
                     /locus_tag="RJ239_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331872.1"
                     /translation="KIILIFIFSFSLSMMILLFKDFIEYKQNKEIQNKNFIIQEEISK
                     LKQDKQKLLTNIQDLNFTLSNKISSTQQQFHILSTITKEINLDKNKAIILNQIISWLN
                     SNELKITNLEFEQTKIILSFIDENHFKRALENLNSTFKFLDKNEETLNIILEVIHE"
BASE COUNT          312 a           79 c          115 g          412 t
ORIGIN      
        1 tctaaatttt gtataaaatt gagtaagtct ttaaagttgc catttaaact tagaaaaaca
       61 taattatagt ggataaaatt tttgttttct tgggaaaatt ttatttcatt aatggttaaa
      121 tttttggata aattattgat ttttttattg aaaaaatctt tatcataaaa aaataaatgc
      181 aatttttctt tatagtattt taatttttct tcctctgttt ttatctgttt tgttagcttt
      241 gtctctattt ctttaagatg tgaattttct atttttgctt catttaatgc aaggtaatta
      301 tgttctacta atgttttttg aaaaatatct tccaaaaagc gatcatgaat tttaaaagct
      361 aaaaacaaag cacaaaggca gataaaagaa ataaaaagaa atttttccct aggatttaaa
      421 ttttgcaaaa atacttctat tttattcatg tatgacttct aatatgatat tcaatgtttc
      481 ttcattttta tcaaggaatt taaaagtaga atttagattt tctaatgctc ttttaaagtg
      541 gttttcatcg ataaaagaaa gaatgatttt tgtttgttca aattcaagat ttgtgatttt
      601 aagttcattg gaattaagcc atgatatgat ttgatttaga atgattgcct tatttttatc
      661 taaattgatt tcttttgtta tggtggataa aatatgaaat tgttgttgtg tagatgatat
      721 tttattggaa agagtaaagt ttaaatcttg tatgtttgtt aataattttt gcttatcttg
      781 ttttagttta gaaatttctt cttgtatgat aaaattttta ttttgaattt ccttattttg
      841 tttgtactct ataaaatctt taaataataa aatcatcatg ctaagactaa agctaaaaat
      901 aaatattaat ataatttt
//
LOCUS       DAPIVO010000126          904 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.128, whole genome shotgun sequence.
ACCESSION   DAPIVO010000126 DAPIVO010000000
VERSION     DAPIVO010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 904)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 904)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.128"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..>904
                     /locus_tag="RJ239_001784"
     CDS             <1..>904
                     /locus_tag="RJ239_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDV7331873.1"
                     /translation="LKNKTQTIKENSLIEFNIEGNNPYEIYTVYKSYKAFNNEQDLTN
                     FTYPIIDYIIFLDSDDYWELNCIEECVPRMDGVDVVWFDSIEYHDIEKSYFKHHSRLK
                     DINIKKECRINPIEWLKLLRQNKIKDFAFAWSGIIDFDYIKDKKMKFKDAIFAEDHLF
                     GILLFSQAKNIYVYPKVFYYYRIRANSLTNQDKKITKDNILPYFKDIFIAFEENATLA
                     KEYFKYVSWVETSLELVRFVENYHDKKISSLLKDTILYFYIKNAFKIKKFDKDPLCIK
                     EKLQLLKPYKISKIRYKVMKFLIS"
BASE COUNT          368 a           85 c          128 g          323 t
ORIGIN      
        1 aactcaaaaa taaaactcaa actataaaag aaaattcttt aatagaattt aacatagaag
       61 gtaataatcc ttatgaaata tatactgtat ataaaagcta taaagctttt aataatgaac
      121 aagatttaac taactttact tatcctatta tagattatat catcttttta gattctgatg
      181 attattggga attaaactgc atagaagaat gtgtacctag aatggatggg gtagatgtgg
      241 tttggtttga tagtattgaa tatcatgata tagaaaaaag ttatttcaag catcatagtc
      301 gtttaaaaga tattaatata aagaaagaat gtagaataaa tcctatagag tggcttaagc
      361 ttctaaggca aaataaaatt aaagactttg catttgcgtg gagtggcata attgattttg
      421 attatataaa agataaaaaa atgaaattta aagacgctat ttttgctgaa gatcatttat
      481 ttggaatttt gcttttttcg caagctaaaa atatttatgt ctatcctaaa gtattttatt
      541 attatagaat tcgagctaat tctttgacaa atcaagataa aaaaatcact aaagataata
      601 tacttccata ttttaaagat atatttattg catttgaaga gaatgcaact ttagcaaaag
      661 agtattttaa atatgttagt tgggtggaaa ccagtttaga attagtgcga tttgtagaaa
      721 attatcatga taaaaaaatt tcttcgttgc tgaaagatac tattttgtat ttttatatca
      781 aaaatgcatt taaaattaaa aaattcgata aagatccttt gtgtattaaa gagaaattgc
      841 aactattaaa accctataaa atttcaaaaa taagatataa agttatgaaa tttttaatat
      901 cttt
//
LOCUS       DAPIVO010000127          891 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.129, whole genome shotgun sequence.
ACCESSION   DAPIVO010000127 DAPIVO010000000
VERSION     DAPIVO010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 891)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 891)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..891
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.129"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..>891
                     /locus_tag="RJ239_001785"
     CDS             <1..>891
                     /locus_tag="RJ239_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional anthranilate synthase component I
                     family protein/class IV aminotransferase"
                     /protein_id="HDV7331874.1"
                     /translation="IPEFINFLDQDNYKKNFIKVKEAISKGRVYQINLTQNFKFHSKM
                     DSFELFKLLLSRQDTEFKAFIKDETREILSFSPELFFKTKKRKIFTKPMKGTIKRDKD
                     PIKDEENKIFLQNDTKNLSENVMICDLLRNDLSKIITKKSLKTKLFEIQSHPTLHQMT
                     SSVQGKLKKNISLYQIFKALFPCGSITGAPKLESIKFIEELEQRDRGIYCGTIGLIHK
                     NKNKFNVAIRTLEKQDEIYTYSTGSGLVWDSKFKDEFEELKLKSAILNPYDFHLFETM
                     YFKNSQILFLKEHLLRLINS"
BASE COUNT          366 a          127 c          109 g          289 t
ORIGIN      
        1 ttattcctga atttataaat tttttagatc aagataatta caaaaaaaat ttcattaaag
       61 ttaaagaggc aatctccaaa ggaagagttt atcaaatcaa cctcactcaa aattttaaat
      121 ttcatagcaa aatggattct tttgaacttt ttaaactttt gctttctaga caagatactg
      181 aatttaaagc ttttataaaa gatgaaacaa gagaaatttt atccttctct cctgaacttt
      241 tcttcaaaac caaaaaaaga aaaatattta caaaacctat gaaaggcaca attaagcgtg
      301 ataaagatcc tataaaagat gaagaaaata aaattttctt gcaaaatgat acaaaaaatc
      361 taagtgaaaa tgttatgatt tgcgatcttt tacgcaacga tctttcaaaa atcatcacaa
      421 aaaaaagctt aaaaaccaaa ctttttgaaa ttcaaagtca ccctacttta catcaaatga
      481 cttcaagtgt acaaggaaaa cttaaaaaaa atatttcttt atatcaaatt tttaaagctc
      541 tctttccttg tggttctatt acaggtgctc caaagcttga aagtattaaa tttattgaag
      601 aattagaaca aagagatcgt ggtatttact gcggaaccat aggtttaata cataaaaata
      661 aaaataaatt taacgtagcc atacgcacct tagaaaaaca agatgaaatt tatacttata
      721 gcacaggtag tggcttggtt tgggactcaa aattcaaaga tgaatttgaa gaattaaaac
      781 ttaaaagcgc gatcttaaat ccttatgatt ttcatctttt tgaaaccatg tattttaaaa
      841 attctcaaat tttattttta aaagaacact tgttaaggct tataaattca g
//
LOCUS       DAPIVO010000128          872 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.130, whole genome shotgun sequence.
ACCESSION   DAPIVO010000128 DAPIVO010000000
VERSION     DAPIVO010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 872)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 872)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.130"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..>872)
                     /locus_tag="RJ239_001786"
     CDS             complement(<1..>872)
                     /locus_tag="RJ239_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7331875.1"
                     /translation="HGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKA
                     IEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQD
                     LAYAENGNSHPDDYQNSANYESQMYEHILTEAYGGNGKVETHSIWLLFKNWFENEMIP
                     NTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL
                     LKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLEN
                     IKQMQDLYEILQPLR"
BASE COUNT          297 a          138 c           98 g          339 t
ORIGIN      
        1 cgcagaggtt gtaaaatttc atataaatct tgcatttgtt tgatattttc taatttattt
       61 ttaaattcat ctatttttct aatagccaag tttaaatcat tttctttttt gtttaaattt
      121 aaatatatat tttgtatatt gttaaaatca ttgctgagta ttttactaaa atctctacaa
      181 tgtttaatac tttgataaac tttataataa gccttaagta aaaattcatt ttgtttattt
      241 aaacttaaag gttctaattt ttcaaaaggt ttatttaaat ctttatcaag taaattctca
      301 caagcccata gaaaaggttt ttctatggtt ccttctatcc ttgctccacc ttcggtacag
      361 ttataggtgg tgatacccat ttttctagta tttggaatca tttcattttc aaaccaattt
      421 ttaaataaaa gccatatact atgagtttca acttttccat ttcctccata agcctcggtt
      481 aaaatatgtt catacatttg actttcataa ttagctgaat tttgataatc atcaggatga
      541 gaattgccat tttcagcata agctaaatcc tgtcctataa aaatgatgtt tttatgactt
      601 agataagttg ctagataaga taatgtatgt gcaacactaa gtcctacagc agcataagaa
      661 aaatctttaa gatttatata atatggaaaa gcaagaactt tttgagttat gactaaattt
      721 ctacccttta aatactcaat cgcctttgga tgaacaacac cagcacaaat aaacacaata
      781 tccttatcaa attctccaaa atcatgatta aaaaactctg ctgttaattc agttctttcc
      841 aacatacaaa cataatcagg ttttatacca tg
//
LOCUS       DAPIVO010000129          786 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.131, whole genome shotgun sequence.
ACCESSION   DAPIVO010000129 DAPIVO010000000
VERSION     DAPIVO010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 786)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 786)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..786
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.131"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..417)
                     /locus_tag="RJ239_001787"
     CDS             complement(<1..417)
                     /locus_tag="RJ239_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2,3 sialyltransferase"
                     /protein_id="HDV7331876.1"
                     /translation="MSMNINALVCGNGPSLKNIDYKRLPKQFDVFRCNQFYFEDRYFV
                     GKDVKYVFFNPFVFFEQYYTSKKLIQNEEYNIENIVCSTINLEYIDGFQFVDNFELYF
                     SDAFLGHEIIKKLKDFFAYIKYNEIYNRQRITSGVYM"
     gene            472..>786
                     /gene="wlaN"
                     /locus_tag="RJ239_001788"
     CDS             472..>786
                     /gene="wlaN"
                     /locus_tag="RJ239_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-1,3 galactosyltransferase"
                     /protein_id="HDV7331877.1"
                     /translation="MSQISIILPTYNVEKYIARALESCINQTFKDIEIIVVDDCGNDK
                     SIDIAKEYASKDDRIKIIHNEENLKLLRARYEGAKVATSPYIMFLDSDDYLELNACEE
                     CIK"
BASE COUNT          320 a          101 c           88 g          277 t
ORIGIN      
        1 catataaact ccactagtaa ttctttgcct attgtatatt tcattatatt taatataggc
       61 aaaaaaatct ttaagctttt ttataatctc atgacctaaa aaagcatcac taaagtataa
      121 ttcaaaatta tcaacaaatt gaaatccatc tatgtattct aaattaatag tagaacaaac
      181 tatattttct atgttatatt cttcgttttg tataagtttt ttactagtat agtattgttc
      241 aaaaaacaca aaaggattaa aaaaaacata ttttacatct ttacccacaa aatatctatc
      301 ttcaaaataa aactgattgc atctaaatac atcaaattgt tttggtaacc ttttataatc
      361 tatatttttt aaactaggtc cattaccgca taccaaagca ttaatattca tactcatttt
      421 attaccttaa atttatagta taattatatc aaaaaaaaat aaagagctaa aatgagtcaa
      481 atttccatca tactaccaac ttataatgtg gaaaaatata ttgctagagc attagaaagt
      541 tgcattaacc aaacttttaa agatatagaa atcattgtag tagatgattg tggtaatgat
      601 aaaagtatag atatagctaa agagtatgct agtaaagatg atagaataaa aatcatacat
      661 aatgaagaga atttaaagct tttaagagca agatatgaag gtgctaaagt agcaacttca
      721 ccttatatca tgtttttaga ttctgatgat tatttagaac ttaatgcttg cgaagaatgt
      781 attaaa
//
LOCUS       DAPIVO010000130          685 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.132, whole genome shotgun sequence.
ACCESSION   DAPIVO010000130 DAPIVO010000000
VERSION     DAPIVO010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 685)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.132"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            1..>685
                     /gene="ung"
                     /locus_tag="RJ239_001789"
     CDS             1..>685
                     /gene="ung"
                     /locus_tag="RJ239_001789"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HDV7331878.1"
                     /translation="MEEITINIDKIKINDDWKEFLRDEFQKKYFLEIKKQYLNAINQN
                     IIIYPPANLIFNAFNLCPLKEIKIIILGQDPYHQPNQAMGLSFSVPKNVKIPPSLNNI
                     FKELQNDLNITPAKSGDLSSWAKQGVLLLNSILSVEANKAASHSSWGWQEFSDAIIHK
                     LSNEKSGLVFMLWGNYAKNKEILIDNTKHLILKAAHPSPLARTGFLGCKHFSKANEFL
                     KKVGKIPIDW"
BASE COUNT          271 a           92 c          108 g          214 t
ORIGIN      
        1 atggaagaaa ttacaataaa catagataag attaaaataa atgatgactg gaaagaattt
       61 ttaagagacg aatttcaaaa aaaatatttt ctagaaatca aaaaacaata cctaaatgcg
      121 attaatcaaa atataattat ttatccacct gcgaatttaa tctttaatgc ttttaattta
      181 tgtcctttaa aagaaattaa aattattatc ctaggacaag atccttatca tcaaccaaat
      241 caagcaatgg ggcttagttt ttcggttcca aaaaatgtaa aaatcccacc aagtcttaat
      301 aatattttta aagaattgca aaatgattta aacatcactc cagcaaaaag cggagattta
      361 agctcttggg caaaacaagg agttttgctc ttaaattcta ttcttagcgt tgaagcaaat
      421 aaagcagcta gccatagttc gtggggttgg caagaattta gtgatgctat aatacataaa
      481 ttaagtaatg aaaaatcagg gcttgttttt atgctttggg gaaattacgc aaaaaacaag
      541 gagattttga ttgataatac taagcatttg attttaaaag cagctcaccc aagcccttta
      601 gctagaacag gatttttagg ttgtaagcat ttttcaaagg ctaatgaatt tttaaaaaaa
      661 gttggtaaaa ttcctataga ttgga
//
LOCUS       DAPIVO010000131          667 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.133, whole genome shotgun sequence.
ACCESSION   DAPIVO010000131 DAPIVO010000000
VERSION     DAPIVO010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 667)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.133"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            71..>667
                     /locus_tag="RJ239_001790"
     CDS             71..>667
                     /locus_tag="RJ239_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDV7331879.1"
                     /translation="MNLWDKKAKTYARYQNTLNTIQKQTFEYLQNLKISFQDKSIIDI
                     GCGTGVWTLHLAKEAKEILALDSANAMLEILQEDAKKLNLNNIKCKNLSFETWMQNNP
                     NVKFDLAFLSMSPALQNEKDYTNFLNLAKIKIYLGWADYRKSDFLDPIFKYFNTEFKG
                     FYKKDLENYLLEKNIFFHKIVFDETRKVQRTKEEAIENA"
BASE COUNT          274 a           73 c           94 g          226 t
ORIGIN      
        1 aagccctttc tttgggcttg aattttaaaa atttatgcta tgattttata tattttataa
       61 aggaaagtat atgaatttat gggataaaaa ggctaaaact tacgcaagat atcaaaacac
      121 tttaaacact atacaaaaac aaacttttga atatttacaa aatttaaaga tttcctttca
      181 agataaaagt attatagata taggatgtgg aactggggtt tggactttac acttagctaa
      241 agaagctaaa gaaattttag ccctagatag tgcaaatgct atgcttgaaa ttttacaaga
      301 agatgctaaa aaactaaatc ttaacaatat aaaatgcaaa aatttgagct ttgaaacttg
      361 gatgcaaaac aatcctaatg ttaaatttga tcttgcattt ttaagtatgt ctcctgcttt
      421 acaaaatgaa aaagattata caaatttctt aaatctagcc aaaataaaaa tttatcttgg
      481 ttgggctgat tatagaaaaa gtgatttttt agatccgatt tttaaatatt ttaatactga
      541 atttaaaggt ttttataaaa aagatttaga aaattattta ctagaaaaaa atatattttt
      601 tcataagatt gtttttgatg aaacacgcaa agtccaaaga acaaaagaag aggctataga
      661 aaatgct
//
LOCUS       DAPIVO010000132          644 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.134, whole genome shotgun sequence.
ACCESSION   DAPIVO010000132 DAPIVO010000000
VERSION     DAPIVO010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 644)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 644)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.134"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..>644)
                     /locus_tag="RJ239_001791"
     CDS             complement(<1..>644)
                     /locus_tag="RJ239_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HDV7331880.1"
                     /translation="TKRGLEQDNQAVKESVQTVSVVEGGNLTARITANPRNPQLIELK
                     NVLNKLLDVLQARVGSDMNAIHKIFEEYKSLDFRNKLENASGSVELTTNALGDEIVKM
                     LKQSSDFANALANESGKLQTAVQSLTTSSNSQAQSLEETAAALEEITSSMQNVSVKTS
                     DVITQSEEIKNVTGIIGDIADQINLLALNAAIEAARAGEHGRGFAVVADEVRKL"
BASE COUNT          192 a          119 c           94 g          239 t
ORIGIN      
        1 ctaactttct aacttcatca gctaccactg caaagcctct accatgttct ccagcacgag
       61 ctgcttcaat agctgcattt aaagctaaaa gattgatttg atctgcaata tcacctataa
      121 tacctgtaac atttttaatc tcttcggatt gagtgataac atcactagtt ttaactgaaa
      181 cattttgcat agaagaagtg atctcttcta aagctgctgc agtttcttct aaagattgag
      241 cttgagaatt tgaagaagtg gttaagcttt gaacagcagt ttgtaatttt ccactttcat
      301 tagctaaagc attagcaaag tctgaacttt gttttagcat tttaactatt tcatcaccta
      361 aagcattagt agttaattct acactaccgc tagcattttc taatttattt ctaaagtcta
      421 agcttttgta ttcttcaaaa attttatgaa tagcattcat atcagaacct actctagctt
      481 gtaaaacatc aagaagttta tttagaacat ttttaagttc aataagctgt gggtttcttg
      541 gattagcagt aattcttgct gttaaattac caccttctac aactgatacg gtttgaactg
      601 attctttaac ggcttgattg tcttgttcta agcctctttt agta
//
LOCUS       DAPIVO010000133          643 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.135, whole genome shotgun sequence.
ACCESSION   DAPIVO010000133 DAPIVO010000000
VERSION     DAPIVO010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.135"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            5..415
                     /gene="perR"
                     /locus_tag="RJ239_001792"
     CDS             5..415
                     /gene="perR"
                     /locus_tag="RJ239_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide-responsive transcriptional repressor
                     PerR"
                     /protein_id="HDV7331881.1"
                     /translation="MELLQMLKKHELKATPQRLCVLKILKRHEHPNIDELYIEIKKEY
                     PSISLATVYKNLNTLQEQGLVVEINVLNQKTCYDIYEEEHIHVVCTKCGGIEDLSFKD
                     AKLYEYQEHLEKKIGNLVNHLSVCAYVDNCKKCH"
     gene            461..>643
                     /locus_tag="RJ239_001793"
     CDS             461..>643
                     /locus_tag="RJ239_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331882.1"
                     /translation="MVYEIQKNFLLSDCTLLENLKKDNIPFRNSKFETFYTQITSNHS
                     VKFQSFCNEFYKITKFN"
BASE COUNT          258 a           74 c           86 g          225 t
ORIGIN      
        1 taaaatggaa ttactacaaa tgcttaaaaa acatgagtta aaagctactc cgcaaagact
       61 atgtgtttta aaaattttaa aaagacatga gcatcctaat attgatgaat tatatataga
      121 aattaaaaaa gaataccctt caatctcttt agcgacggtt tataaaaatc ttaatacttt
      181 acaagaacaa ggtttagttg ttgaaatcaa tgttttaaat caaaaaactt gttacgatat
      241 ctatgaagaa gaacatattc atgttgtttg caccaaatgt ggtggtatag aggatttaag
      301 ttttaaagat gctaagcttt atgaatatca agagcattta gaaaaaaaga taggcaatct
      361 cgtcaatcat ctgtctgttt gtgcttatgt tgataattgc aaaaagtgtc attaagcaaa
      421 ataaggttaa aataacccat atattttaag ggttatttta atggtttatg aaattcaaaa
      481 aaacttttta ctatctgatt gcactctttt agagaattta aaaaaagata atataccttt
      541 tcgaaattct aaatttgaaa ctttttatac tcaaataact tcaaatcata gtgttaaatt
      601 tcaaagtttt tgcaatgaat tttataaaat tacaaaattt aat
//
LOCUS       DAPIVO010000134          624 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.136, whole genome shotgun sequence.
ACCESSION   DAPIVO010000134 DAPIVO010000000
VERSION     DAPIVO010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 624)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.136"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..203)
                     /locus_tag="RJ239_001794"
     CDS             complement(<1..203)
                     /locus_tag="RJ239_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDV7331883.1"
                     /translation="MGFRINTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADD
                     ASGMAIADSLRSQAATLGQAINNG"
     gene            complement(349..>624)
                     /locus_tag="RJ239_001795"
     CDS             complement(349..>624)
                     /locus_tag="RJ239_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDV7331884.1"
                     /translation="AMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVK
                     AAESQIRDVDFAAESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ"
BASE COUNT          183 a          115 c          113 g          213 t
ORIGIN      
        1 ccattgttta tagcttgacc taaagtggct gcttgtgaac gcaaagaatc tgctatcgcc
       61 atccctgaag catcatctgc tgcggagttg attctaagac ctgaactaag tctgcttaaa
      121 gacttatcca gttctctagc attaacaact gaatttgcat gtgcatttaa tgcaccgatg
      181 ttggtgttta tcctaaaacc cattttaaat cctttcaaaa tattgcatcg aaaagattaa
      241 agcaaaaagt gttccaagtt ttagtttaat taaaaatttt agagtttaaa ataaaaaagc
      301 ctagttctaa actaggcttg gatttgtata tattgcagct tttgtaaact actgtagtaa
      361 tcttaaaaca ttttgttgaa cagaattagc ctgtgccatg gcataagagc cactttgagc
      421 taagatattt gctttagagt agtttgcact ctcagctgca aagtctacat cacggatttg
      481 cgactcagct gctttaacgt ttacttgagt tacggtgatg ttgtttatcg ttgatgtaac
      541 ttgattttgc accgaaccaa tgtcggctct gatttgatca agatttgtta tagctgtttc
      601 agctatatcc atcacagcca tagc
//
LOCUS       DAPIVO010000135          618 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.137, whole genome shotgun sequence.
ACCESSION   DAPIVO010000135 DAPIVO010000000
VERSION     DAPIVO010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 618)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.137"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            28..555
                     /locus_tag="RJ239_001796"
     CDS             28..555
                     /locus_tag="RJ239_001796"
                     /inference="COORDINATES: protein motif:HMM:NF022634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2972 domain-containing protein"
                     /protein_id="HDV7331885.1"
                     /translation="MVPKDPSIFQNRVDSDDGSLVVLPVRLYFVYQNKEITFLITTKQ
                     LIILDPDREKYTDVTKKIINWEIKYSNIIILLDLDKWNIIKKDSSFLEYQQKIQEYLK
                     ALEDNEQKRIQNAITEIEILNYLKENKDIARKFKQILDNDHLPYIKQHRPDIVASWKY
                     YQEFEKMCEELDENN"
BASE COUNT          259 a           60 c           81 g          218 t
ORIGIN      
        1 ttaaatttat ccagtagcta taattttttg gttccaaaag atccatcgat ttttcaaaat
       61 agagttgatt cagatgatgg aagtttagtt gttttacctg taagattata ttttgtttat
      121 caaaataaag agattacatt tttgattaca actaagcagc ttattatttt agatccagat
      181 agggagaagt atacagatgt tacaaaaaaa ataattaatt gggaaattaa atatagcaat
      241 attataattt tattagattt agataaatgg aatataatta aaaaagatag tagtttttta
      301 gaatatcaac aaaaaattca agaatatcta aaagcattag aagataatga gcaaaaaaga
      361 attcaaaatg ctatcacaga aattgaaatc ttaaattatt taaaagaaaa taaggacatt
      421 gcacgcaaat ttaaacaaat tttagataat gatcatcttc cttacatcaa acaacatcgt
      481 ccagatatag tagcttcttg gaaatactac caagaatttg aaaagatgtg tgaagaattg
      541 gatgaaaata attaattcta gttttatgat tttataacta ataattacat ataattattc
      601 cttgtttttt aattaatt
//
LOCUS       DAPIVO010000136          617 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.138, whole genome shotgun sequence.
ACCESSION   DAPIVO010000136 DAPIVO010000000
VERSION     DAPIVO010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 617)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 617)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.138"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..>617
                     /locus_tag="RJ239_001797"
     CDS             <1..>617
                     /locus_tag="RJ239_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7331886.1"
                     /translation="MLEKEGIVPDYVTNLDFTDLAMKFFQNKENLKQSIIALECATHP
                     NVARSLKAENCMIILRNKALYQRFNLSDFGYIDTGTHVSHFSYTLALALGFKNIIMIG
                     QDLAFDEKGNSHSQGFSYGEQFSGEKTVPTLKTQAYAGKGEVLTHITWNDYRIKLEYL
                     FACNSKEAKFYNATEGGARINFTEELSFKECCEKLLTKEKPQFELP"
BASE COUNT          220 a           93 c          104 g          200 t
ORIGIN      
        1 atgcttgaaa aagaaggcat cgtgcctgat tatgttacga atttagattt tactgatcta
       61 gcaatgaaat tttttcaaaa taaagaaaat ttaaaacaaa gcattattgc tcttgagtgt
      121 gctacacatc ctaatgtcgc acgtagttta aaggctgaaa attgtatgat tattttaaga
      181 aataaagctc tttatcaacg cttcaatctt agcgactttg gctatatcga tacaggtact
      241 catgtaagtc atttttctta tactttagct ttggctttag gatttaaaaa tattatcatg
      301 ataggacaag atttagcttt tgatgaaaaa ggaaattcac actcacaagg ttttagttat
      361 ggcgagcaat ttagcggaga aaaaactgtg cctaccttaa aaacccaagc ttatgcaggc
      421 aaaggagaag ttttaactca tataacctgg aatgattatc gtataaaact tgaatatctt
      481 tttgcttgca acagtaaaga agctaaattt tacaatgcta ctgaaggtgg agcaaggatt
      541 aattttactg aagaactttc ctttaaagaa tgttgtgaaa aactccttac aaaagaaaaa
      601 cctcaatttg aacttcc
//
LOCUS       DAPIVO010000137          608 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.139, whole genome shotgun sequence.
ACCESSION   DAPIVO010000137 DAPIVO010000000
VERSION     DAPIVO010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 608)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 608)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.139"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..>608)
                     /locus_tag="RJ239_001798"
     CDS             complement(<1..>608)
                     /locus_tag="RJ239_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7331887.1"
                     /translation="MLEKEGIIPDYVTNLDFTDLAMKFFQNKENKTSLNMLSCATHPS
                     LVHFLDNKSVVLRDDPLYQRFNLNDFGYIDTGTHVSHFSYTLALALGFKNIIMIGQDL
                     AFDEEGNSHSKGFDFGEKFSGEENIDKLKVTAYAGKGEVLTHITWNDYRIKLEYLFAC
                     NEQKAKFYNATEGGARINFTEELSFKECCEKLLTKEKPQFELP"
BASE COUNT          202 a          100 c           87 g          219 t
ORIGIN      
        1 ggaagttcaa attgaggttt ttcttttgta aggagttttt cacaacattc tttaaaggaa
       61 agttcttcag tgaaattaat ccttgctcca ccttcagtag cattgtaaaa ctttgctttt
      121 tgttcattgc aagcaaaaag atattcaagt tttatacgat aatcattcca ggttatatgc
      181 gttaaaactt cacctttgcc tgcataggcg gtgactttaa gtttatctat attttcttca
      241 ccactaaatt tctctccaaa atcaaaacct tttgagtgtg aatttccttc ttcatcaaag
      301 gctaaatctt gtcctatcat gatgatattt ttaaatccta aagccaaagc taaggtataa
      361 gaaaaatgac ttacatgagt gcctgtatcg atatagccaa agtcattaag attgaagcgt
      421 tggtataaag gatcatctct taaaactaca cttttattat ctaaaaaatg aaccaaacta
      481 ggatgagtag cacatgaaag catatttaaa gaagttttat tttctttatt ttgaaaaaat
      541 ttcattgcta gatcagtaaa atctaaattc gtaacataat caggtattat gccttctttt
      601 tcaagcat
//
LOCUS       DAPIVO010000138          600 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.140, whole genome shotgun sequence.
ACCESSION   DAPIVO010000138 DAPIVO010000000
VERSION     DAPIVO010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 600)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 600)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.140"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..378
                     /locus_tag="RJ239_001799"
     CDS             <1..378
                     /locus_tag="RJ239_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331888.1"
                     /translation="NFLSDFKESKQEVVTIKKHEKLEIFKNLSQEDQEISFVKIEILN
                     YDSNEDSLSFNLDIFPSGMSYKYGILKGSMHIILQGKTSSTMLFPFLKSMIYKNKSEN
                     SSEKIFTLMINQKKHYKLIANLS"
     gene            complement(381..587)
                     /locus_tag="RJ239_001800"
     CDS             complement(381..587)
                     /locus_tag="RJ239_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331889.1"
                     /translation="MEFLAFIFLIIIFLFVVFIIVTRYEKKIKLLNQNIQNMKEDIAD
                     LKETTQKNRSLIEKNRSNIENIIK"
BASE COUNT          226 a           60 c           75 g          239 t
ORIGIN      
        1 aattttcttt ctgattttaa agaaagtaag caagaagttg ttactatcaa aaaacatgaa
       61 aaacttgaaa tttttaaaaa tttatctcaa gaagatcaag aaattagctt tgttaaaatt
      121 gaaattttaa attatgatag taatgaagat agtttaagtt ttaatcttga tatatttcca
      181 agcggtatga gctataagta cggaatttta aaaggctcta tgcatattat tttacaaggt
      241 aaaacttcta gtacgatgct ttttccgttt ttaaaaagta tgatttataa aaataaaagc
      301 gaaaattcaa gtgaaaaaat ttttacttta atgataaatc agaaaaaaca ctataagctt
      361 atcgcaaatc tttcttagtt ttattttatt atattttcta tattagagcg atttttttca
      421 attaaagagc gatttttttg agttgtttct ttaagatcgg ctatatcttc tttcatattt
      481 tgtatgtttt ggttgagtaa ttttatcttt ttttcatagc gagtaacgat gataaagact
      541 acaaataaaa atataataat caaaaaaata aatgctaaaa attccatatt tttccttttt
//
LOCUS       DAPIVO010000139          518 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.141, whole genome shotgun sequence.
ACCESSION   DAPIVO010000139 DAPIVO010000000
VERSION     DAPIVO010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 518)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.141"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..423
                     /locus_tag="RJ239_001801"
     CDS             <1..423
                     /locus_tag="RJ239_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDV7331890.1"
                     /translation="NINMQRINKIIENPVIYYYFSRGARARLQNQLVYRLGKVVVEAK
                     SFNKIIKLPFLMLKICLEHNFEHKVYRSIVQFRPDLKLLPLECYLDYHEALVIKEHLS
                     YKFGKLILLSFKGWYKGKIFILPFMLKKRYKEYKNKMI"
BASE COUNT          191 a           46 c           86 g          195 t
ORIGIN      
        1 aatataaata tgcaaagaat taataaaata attgaaaatc ctgtaatata ttattatttt
       61 tctagaggag ctagagctcg tttgcaaaac cagctggtat atagattggg taaagttgtt
      121 gttgaggcaa agtcatttaa taaaattatt aaattacctt ttcttatgct caaaatttgc
      181 cttgagcata attttgagca taaagtttat aggtctattg tacaatttag accagatttg
      241 aagcttcttc cattagagtg ttatttggat tatcatgaag cattagttat aaaagagcat
      301 ttatcttata aatttggaaa attgattttg ctttctttta agggatggta taaagggaag
      361 atttttattt tgccatttat gttaaaaaaa agatataagg aatataagaa taagatgata
      421 taatattttt ggcagtttgt tttaaaggat gttttaatgc agcgatttaa aaaatggttt
      481 ttgtctatca taaaaaattt caagcaacat gaaaaaat
//
LOCUS       DAPIVO010000140          498 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.142, whole genome shotgun sequence.
ACCESSION   DAPIVO010000140 DAPIVO010000000
VERSION     DAPIVO010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 498)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 498)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.142"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            1..>498
                     /locus_tag="RJ239_001802"
     CDS             1..>498
                     /locus_tag="RJ239_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HDV7331891.1"
                     /translation="MKKILLFILSLGIFYTFTQAKNLEQEQNTSSNLVSVSIAPQAFF
                     VKKIAANTLDVNVILPPNSNEHNFEFKPSTMKKLEKSDIYFTIGLEFEKVFTDKFKQN
                     FSKLQVVNMQKNIALIQTHDTHEHSHEHEHHEHEHFDPHTWLDPILVQTMALNIYDTL
                     IQKYPQ"
BASE COUNT          194 a           80 c           61 g          163 t
ORIGIN      
        1 ttgaaaaaaa ttctattatt tatcttatct ttagggatat tttatacttt cacacaagct
       61 aaaaatttag agcaagaaca aaatactagt agcaatttag ttagtgtcag tatagcacct
      121 caagcatttt ttgttaaaaa aatagctgca aatactctag atgtcaatgt tattttgccc
      181 ccaaatagca atgagcataa ttttgaattt aaaccaagta ctatgaaaaa acttgaaaaa
      241 agtgatattt atttcactat aggcttagaa tttgaaaaag tttttacgga taaatttaaa
      301 caaaattttt caaaacttca agttgtaaat atgcaaaaaa acatagcttt gattcaaact
      361 catgatacac acgaacactc tcatgagcat gaacaccacg aacatgagca ttttgatcct
      421 catacttggc tagatcctat tttagtccaa actatggctt taaatattta tgacaccttg
      481 attcaaaaat atccacaa
//
LOCUS       DAPIVO010000141          473 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.143, whole genome shotgun sequence.
ACCESSION   DAPIVO010000141 DAPIVO010000000
VERSION     DAPIVO010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.143"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
BASE COUNT          223 a           62 c           54 g          134 t
ORIGIN      
        1 ttttatacaa tttttaatat aatctaaaat tataatttta aatgagaaat caggagcttg
       61 ctaatgttac ttaacacgcc ttgcaggggg ataatagata caaattttga aagcaaaaga
      121 attagcataa cttcaacttt aaaatttcaa gaaaaaaaga aaaagtagaa gctaaggctg
      181 agaaagaaga agcaaataaa gacaatagca attctacaaa cacaaatacc aataaaaaag
      241 ataaactttt ggatatatct gcttagtcta aaatatacta tagctatatc tccttaaaga
      301 atacgcaata aatgattttt tgatttttat taagctttta aaacatcgaa aaaaggaaaa
      361 attaaaaaac acaaaaacaa tatcccaaag tccatagctt agaagaagac cttgcgatac
      421 ttaaaaacaa cccatattaa atcacaaaaa taaaatatat ttaaatattt att
//
LOCUS       DAPIVO010000142          442 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.144, whole genome shotgun sequence.
ACCESSION   DAPIVO010000142 DAPIVO010000000
VERSION     DAPIVO010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 442)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 442)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.144"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            complement(<1..>442)
                     /locus_tag="RJ239_001803"
     CDS             complement(<1..>442)
                     /locus_tag="RJ239_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HDV7331892.1"
                     /translation="GFFLHTNGEKAMERFLKEVGVVLIGAFGYEDGKRYISIFNFLIS
                     EACICNDLKFAIGILDVNCQKYDKFCFLLQNKPVLILLRDPIDSLKSFINVRHQKNGF
                     NEIFKIDINNTDFDKINDRIVYVHESNGCFNPDTNQKFPSLESI"
BASE COUNT          179 a           75 c           35 g          153 t
ORIGIN      
        1 ttaatacttt caagagatgg aaatttttga tttgtatctg gattaaaaca accatttgat
       61 tcgtgaacat aaactattct atcattaatt ttatcaaaat cagtattgtt aatatctatt
      121 ttaaaaattt cattaaatcc atttttctga tgtctaacat taataaaaga tttcaaagaa
      181 tcaataggat ctctaagcaa aatcaataca ggtttatttt gcaacaaaaa acaaaattta
      241 tcatactttt gacaattcac atcgagtata cctatggcaa attttaaatc attacatata
      301 caagcttcac taatcaaaaa attaaaaata ctaatataac gtttaccatc ctcatatcca
      361 aatgcaccaa taagaacaac accaacttct tttaaaaatc tctccatagc tttttctcca
      421 tttgtatgca aaaaaaatcc aa
//
LOCUS       DAPIVO010000143          418 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.145, whole genome shotgun sequence.
ACCESSION   DAPIVO010000143 DAPIVO010000000
VERSION     DAPIVO010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 418)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 418)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.145"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..>418
                     /locus_tag="RJ239_001804"
     CDS             <1..>418
                     /locus_tag="RJ239_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HDV7331893.1"
                     /translation="LNPNSAIERVKNHLAYKLGQTVIEHRHNGGGYIALFKKLYKIKK
                     QHKKEQKIYQQTIQVFPQLKYPSLETCPDYNEALRYKFHLSYILGEVLIKAYQNWYKG
                     AGFKLKNNIKKANKEFQIFREILKEFKELNGKTLMAI"
BASE COUNT          187 a           54 c           57 g          120 t
ORIGIN      
        1 gcttaaccca aattcagcca tagaaagagt gaaaaaccat ttagcttata aactaggtca
       61 aactgtgata gaacatagac ataacggggg ggggtatata gcattattta aaaaactcta
      121 taaaatcaaa aaacaacata aaaaagaaca aaaaatttat caacaaacca tacaagtttt
      181 tcctcaactc aaatatccaa gtttagaaac atgtcctgat tataatgaag ctctaagata
      241 taaatttcat ttatcctata tactcggtga agttttaatc aaggcttatc agaattggta
      301 taaaggagct ggatttaaat taaaaaataa tattaaaaaa gcaaataaag aatttcaaat
      361 ttttagagaa attttgaaag aatttaaaga attaaatggt aaaactttaa tggccatt
//
LOCUS       DAPIVO010000144          405 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.146, whole genome shotgun sequence.
ACCESSION   DAPIVO010000144 DAPIVO010000000
VERSION     DAPIVO010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.146"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            48..230
                     /locus_tag="RJ239_001805"
     CDS             48..230
                     /locus_tag="RJ239_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331894.1"
                     /translation="MKKVVLISALLGAFAANVFAANTPSDVNQTHTKAHHSKAKADKK
                     HEAKTHKKTKEQTPAQ"
BASE COUNT          177 a           66 c           52 g          110 t
ORIGIN      
        1 taattacaat taatttgcaa ctaaaaatta ttcataagga ggaaaatatg aaaaaagttg
       61 tactaatctc agcattacta ggtgctttcg cagctaatgt ttttgcagct aatactccaa
      121 gcgatgtaaa tcaaacacat acaaaagctc atcattcaaa agctaaagct gataaaaaac
      181 atgaagctaa aactcacaaa aaaacaaaag agcaaacacc agctcaataa tgcccagcct
      241 tgatataagt ctataataga cttatatcaa aagctattcg tattctacaa aataaattat
      301 taatatttat taaatttcaa tagaaaaaat gaaaaaattg ttattttaaa agaaaaatta
      361 aaaagtggtg acccatacga gactcgaact cgtgttaccg ccgtg
//
LOCUS       DAPIVO010000145          358 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.147, whole genome shotgun sequence.
ACCESSION   DAPIVO010000145 DAPIVO010000000
VERSION     DAPIVO010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.147"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            4..>358
                     /gene="wlaN"
                     /locus_tag="RJ239_001806"
     CDS             4..>358
                     /gene="wlaN"
                     /locus_tag="RJ239_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002864815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-1,3 galactosyltransferase"
                     /protein_id="HDV7331895.1"
                     /translation="MLCFEAFITNAKKSIKKLNIKQGKYNNKEFTMQILKTKNPFWTM
                     WAKIIKKDIYLKAFNMLNLKKEIKINMAEDALLYYPLTILSNEIFYLTQPLYTQHVNS
                     NSITNNINSLEANIQE"
BASE COUNT          165 a           48 c           35 g          110 t
ORIGIN      
        1 gatttgttgt gttttgaagc ttttattacc aatgcaaaaa aatcaataaa aaaattaaat
       61 ataaaacaag gaaaatacaa caacaaagaa tttacaatgc aaatacttaa aactaaaaat
      121 ccattttgga caatgtgggc taaaataatc aaaaaagata tttatttaaa agccttcaac
      181 atgttaaatc tcaaaaaaga aatcaaaata aatatggcag aagatgcctt attatattat
      241 cctttgacaa tattatctaa tgaaatattt tacttaacac aacctttgta tacccagcat
      301 gtaaatagca attctataac aaataatatt aattctttag aagctaatat tcaagaac
//
LOCUS       DAPIVO010000146          352 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.denovo.148, whole genome shotgun sequence.
ACCESSION   DAPIVO010000146 DAPIVO010000000
VERSION     DAPIVO010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 352)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 352)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.denovo.148"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..>352
                     /locus_tag="RJ239_001807"
     CDS             <1..>352
                     /locus_tag="RJ239_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HDV7331896.1"
                     /translation="DGDMKIIYSIVENPENYYFLYMGYCNDMFGKLYFGASERIKWQL
                     SYRIGKLLIDLKNPVQILKFPFKLFLEIKQFKFEQKIYKTTIKFYPNLQLPPLEEYSD
                     YEQALKTKKHLSYIL"
BASE COUNT          133 a           38 c           49 g          132 t
ORIGIN      
        1 gatggtgata tgaaaataat ttattctata gttgaaaacc cagaaaatta ttattttctc
       61 tatatggggt attgtaatga tatgtttggt aagttatatt ttggtgcctc tgaaaggatt
      121 aaatggcaat tatcttatag aataggtaaa cttttgattg atcttaaaaa tccagtacaa
      181 atcttgaaat ttccatttaa attgtttttg gagattaaac aatttaaatt tgaacaaaaa
      241 atttataaaa ctacaattaa attttatcca aatttacagc ttccccctct agaggaatat
      301 tctgattatg aacaggcatt gaaaactaaa aaacatttaa gttatatttt ag
//
LOCUS       DAPIVO010000147         5783 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.guided.081, whole genome shotgun sequence.
ACCESSION   DAPIVO010000147 DAPIVO010000000
VERSION     DAPIVO010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5783)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5783)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5783
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.guided.081"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            <1..264
                     /locus_tag="RJ239_001808"
     CDS             <1..264
                     /locus_tag="RJ239_001808"
                     /inference="COORDINATES: protein motif:HMM:NF015397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HDV7331897.1"
                     /translation="IEKTNKAAVSVTLLTPSLIKATNVLISKTPPLTPEQAHKNAVEL
                     AEHTKAWKGHEVLIATHIDKGHIHTHFIVNSVNYENGHKLQWM"
     gene            316..690
                     /locus_tag="RJ239_001809"
     CDS             316..690
                     /locus_tag="RJ239_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001129922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TnpV protein"
                     /protein_id="HDV7331898.1"
                     /translation="MAKSLFEELGGKYERQGDYLIPCLTVPAEEEQAIGIWGQRHLDY
                     LKQYRKVTYTNLLTSGRLNAYLADINRQAQERFERLIEGMKQAQGITEQLKAENALEW
                     TGCLNNIRACAREIVEKEIIFA"
     gene            1057..2976
                     /gene="tet(O)"
                     /locus_tag="RJ239_001810"
     CDS             1057..2976
                     /gene="tet(O)"
                     /locus_tag="RJ239_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032490535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance ribosomal protection
                     protein Tet(O)"
                     /protein_id="HDV7331899.1"
                     /translation="MKIINLGILAHVDAGKTTLTESLLYTSGAIAELGSVDEGTTRTD
                     TMNLERQRGITIQTAVTSFQWEDVKVNIIDTPGHMDFLAEVYRSLSVLDGAVLLVSAK
                     DGIQAQTRILFHALQIMKIPTIFFINKIDQEGIDLPMVYREMKAKLSSEIIVKQKVGQ
                     HPHINVTDNDDMEQWDAVIMGNDELLEKYMSGKPFKMSELEQEENRRFQNGTLFPVYH
                     GSAKNNLGTRQLIEVIASKFYSSTPEGQSELCGQVFKIEYSEKRRRFVYVRIYSGTLH
                     LRDVIRISEKEKIKITEMCVPTNGELYPSDTACSGDIVILPNDVLQLNSILGNEMLLP
                     QRKFIENPLPMLQTTIAVKKPEQREILLGALTEISDGDPLLKYYVDTTTHEIILSFLG
                     NVQMEVICAILEEKYHVEAEIKEPTVIYMERPLRKAEYTIHIEVPPNPFWASVGLSIE
                     PLPIGSGVQYESRVSLGYLNQSFQNAVMEGVLYGCEQGLYGWKVTDCKICFEYGLYYS
                     PVSTPADFRLLSPIVLEQALKKAGTELLEPYLHFEIYAPQEYLSRAYHDAPRYCADIV
                     STQIKNDEVILKGEIPARCIQEYRNDLTCFTNGQGVCLTELKGYQPAIGKFICQPRRP
                     NSRIDKVRHMFHKLA"
     gene            3028..3201
                     /locus_tag="RJ239_001811"
     CDS             3028..3201
                     /locus_tag="RJ239_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine-rich KTR domain-containing protein"
                     /protein_id="HDV7331900.1"
                     /translation="MMKCEWILCPVCGSKTRNKIRKDTVLENYPLYCPKCRQERLIKV
                     DNLKITVIKEPDA"
     gene            3399..3551
                     /locus_tag="RJ239_001812"
     CDS             3399..3551
                     /locus_tag="RJ239_001812"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7331901.1"
                     /translation="MHVPEKGKTFAGEVREETVAWSKDTYQLLKQAEQGKVKSYVQDI
                     AVPTNL"
     gene            complement(3576..4868)
                     /locus_tag="RJ239_001813"
     CDS             complement(3576..4868)
                     /locus_tag="RJ239_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001274343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDV7331902.1"
                     /translation="MSANNNELISISHKIELKPNNKAKTHFKKAFGCARLAYNWGLAK
                     WQEYYKQGIKKSHLELKKEFNVIKKEQFPFVYEVSKYATQQPFLNLNLAFQKFFRDLK
                     QGKVSYPKFKKKKDNFGSYYIGGDQAIIKDEKYLKVPNLGLVKMKEKLRFNGKINSFT
                     ISQSADKFFVSFSMQISKDEYLKTHNKAKNNNLALSIDVGLKSFLSLSNGLEIKAPKP
                     LAKFNRLMIKRARQLSKKQHAKTKQEALQGIKKSSNYLKASIKLNKLHRKIANIRSDF
                     LHKLTSSLVANAKYFCLEDLNVKGMMSNHRLAKSISDVSFYEFKRQLEYKSSYNDKEI
                     YQVDRFYPSSKLCSNCGTIKENLALKDRVYICDECGISIDRDYNASLNLLSQLKQKIG
                     KVLAEFTPADLTALLNDLAINQIATSKVETGIQQKSYL"
     gene            complement(4855..5493)
                     /locus_tag="RJ239_001814"
     CDS             complement(4855..5493)
                     /locus_tag="RJ239_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS607-like element ISChh1 family transposase"
                     /protein_id="HDV7331903.1"
                     /translation="MNKLLSIGQASKALGVTIQTLRNWDKKGLLKPDDMTKGGERRYK
                     LETLKAINKNLVFNKDSLKTIAYARVSSHDQKDDLIRQVQVLELYCSKQGFNYEVIQD
                     LGSGMNYYKKGLTKLLNQILDGKVKRLVLTHKDRLLRFGAELVFAICEAKEVEVIIIN
                     KGEESVKFEEELAKDVLEIITVFSARLYGSRSKKNKKLLDEMQEVVVENVSK"
     gene            complement(5598..5765)
                     /locus_tag="RJ239_001815"
                     /pseudo
     CDS             complement(5598..5765)
                     /locus_tag="RJ239_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343661.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="citrate transporter"
BASE COUNT         1889 a          990 c         1097 g         1807 t
ORIGIN      
        1 atagaaaaaa caaacaaagc tgccgtatcc gttacgcttt tgactccatc tttaataaaa
       61 gcaaccaatg ttttaatatc aaaaacacct cctttaaccc cggagcaggc tcacaagaac
      121 gctgtcgagc tggcagagca tacaaaggca tggaaagggc atgaagttct gatagccacg
      181 catatagaca aggggcatat acacacgcac tttattgtca attccgtaaa ttatgagaac
      241 ggtcataagc tccaatggat gtaggacgga ttttgcggac attcaaaata aaaaagaatg
      301 tggaggtaac agacaatggc aaaatcatta tttgaggaac tgggcggcaa atacgaaagg
      361 caaggggatt atttgatacc gtgcttaact gtacccgccg aagaagaaca ggcaataggc
      421 atctgggggc aacggcattt agattatcta aaacagtacc gtaaagttac atacaccaat
      481 cttcttacaa gcggcaggct aaacgcctac cttgccgaca tcaacagaca ggcacaggaa
      541 cgctttgaaa ggctcataga gggtatgaaa caggcacagg gcataacgga acagctaaag
      601 gcagaaaacg ccttagaatg gacaggatgc ctcaataaca taagggcttg tgcgagggag
      661 attgtggaaa aggaaattat ttttgcataa acagatgatt agtggcaggg ggaaatcctg
      721 ccgctttttc tgctttagtt tgtcagcttg acaaataaag ggttaaagaa tataattaga
      781 ttcagtatta tacaaggagt taataaatat gcggcaaggt attcttaaat aaactgtcaa
      841 tttgatagtg ggaacaaaaa gtagcagtcc cgtttcactt ttaatatggg gcttagtttt
      901 ttgtacccag tttaagaata cttttatcat gtgattttat atgcccgaaa acatataagt
      961 gttttggggc tattggagtt atttacccag tgataggagt atttatcact gggtattttt
     1021 atgccctttt ttgggtgttg ataggaggaa aatcacatga aaataattaa cttaggcatt
     1081 ctggctcacg ttgacgcagg aaagacaaca ttaacggaaa gtttattgta taccagtggt
     1141 gcaattgcag aactagggag cgtagatgaa ggcacaacaa ggacagatac aatgaatttg
     1201 gagcgtcaaa ggggaatcac tatccagaca gcagtgacat cttttcagtg ggaggatgta
     1261 aaagtcaaca ttatagatac gccaggccat atggattttt tggcggaagt ataccgttct
     1321 ttatccgtat tagacggagc agtattatta gtttctgcaa aggatggcat acaggcacag
     1381 acccgtatac tgtttcatgc actacagata atgaagattc cgacaatttt tttcatcaat
     1441 aaaattgacc aagaggggat tgatttgcca atggtatatc gggaaatgaa agcaaagctt
     1501 tcttcggaaa ttatagtgaa gcaaaaggtt gggcagcatc cccatataaa tgtaacggac
     1561 aatgacgata tggaacagtg ggatgcggta attatgggaa acgatgaact attagagaaa
     1621 tatatgtcag ggaaaccgtt taaaatgtca gaactggaac aggaagaaaa caggagattc
     1681 caaaacggaa cgttatttcc cgtttatcac ggaagcgcta aaaacaatct ggggactcgg
     1741 cagcttatag aagtaattgc cagtaaattt tattcatcaa cgcctgaagg tcaatctgaa
     1801 ctatgcgggc aggtttttaa gattgaatat tcagagaaaa ggcggcgttt tgtttatgtg
     1861 cgtatatata gcggaacatt gcatttgagg gatgttatta gaatatctga aaaagagaaa
     1921 ataaaaatca cagagatgtg tgttccgaca aacggtgaat tatatccatc cgatacagcc
     1981 tgctctggtg atattgtaat tttaccaaat gatgttttgc agctaaacag tattttgggg
     2041 aacgaaatgc tgttgccgca gagaaaattt attgaaaatc ctctccctat gctccaaaca
     2101 acgattgcag taaagaaacc tgaacagcgg gaaatattgc ttggggcact tacagaaatt
     2161 tcagatggcg accctctttt aaaatattat gtggatacta caacgcatga gattatactt
     2221 tcttttttgg ggaatgtgca gatggaagtc atttgtgcca tccttgagga aaaatatcat
     2281 gtggaggcag aaataaaaga gcctactgtt atatatatgg aaagaccgct tagaaaagca
     2341 gaatatacca tccacataga agtcccgcca aatcctttct gggcttctgt cgggttgtcc
     2401 atagagccgc tccctattgg aagcggagtg cagtatgaaa gcagagtttc acttggatat
     2461 ttaaatcaat cgttccaaaa tgcggttatg gagggggttc tttatggctg cgagcagggg
     2521 ctgtatggat ggaaagtgac agactgtaaa atctgttttg aatatggatt gtattatagt
     2581 cctgtaagta cccccgcaga ctttcggctg ctttccccta tcgtattgga gcaggcttta
     2641 aaaaaagcag ggacagaact attagagcca tatctccact ttgaaattta tgcaccgcag
     2701 gaatatctct cacgggcgta tcatgatgct ccaaggtatt gtgcagatat tgtaagtact
     2761 cagataaaga atgacgaggt cattctgaaa ggagaaatcc ctgctagatg tattcaagaa
     2821 tacaggaacg atttaacttg tttcacaaat gggcagggag tctgcttgac agagttaaaa
     2881 ggataccagc cagctattgg taaatttatt tgccaacccc gccgcccgaa tagccgtata
     2941 gataaggttc ggcatatgtt ccacaagtta gcttaacagc ttgcaaaagt catataaaat
     3001 gagatttgaa aggattagag actaattatg atgaaatgcg aatggatatt gtgtcctgtt
     3061 tgtgggagca aaacccgtaa taaaattagg aaggacactg ttttggagaa ttatcccctt
     3121 tattgtccaa aatgcagaca agaaagattg attaaagttg acaacttgaa gataactgtc
     3181 atcaaagagc cagacgctta agacgcagag ccgatgaaat tgtggaacaa ttcacgaatc
     3241 atcggctctt tttgtttcgt atttgaaaga acaaactcac caaataaaaa aaacgatatt
     3301 cgggtgggtt attttgttat accctaaatt accctctgag taagcacgac cttaaagact
     3361 taaaggaacg gtgcaacgag cagagctggg aacagggctt gcatgtgccg gagaaaggaa
     3421 agacatttgc tggagaagtc cgggaagaaa cggtggcatg gagcaaagac acctaccagc
     3481 ttttgaaaca ggcagagcag ggaaaggtca aaagctatgt gcaggatatt gccgttccta
     3541 caaacctata aaatcctata aaaagatata aaactctata aataggattt ttgttgtatt
     3601 cctgtttcaa ccttgctagt tgctatttga tttattgcta aatcatttaa cagagctgtc
     3661 aagtccgcag gcgtaaattc ggcaagaact ttgcctattt tttgctttaa ttgtgaaagc
     3721 aaattaagac tagcattgta gtctctatca atgctaattc cacattcatc gcaaatataa
     3781 actctatctt ttagagctaa attttctttt atagttccac aattagagca taatttagaa
     3841 ctaggataaa atctatctac ttgatagatt tctttatcgt tgtagctaga tttatattct
     3901 agttgccttt taaactcata aaaacttaca tcgcttatag atttagcaag tctatgatta
     3961 ctcatcatcc cttttacatt taaatcctct aagcaaaaat atttagcatt tgctaccaag
     4021 ctagaagtaa gcttgtgtaa aaaatcactt cttatatttg ctattttacg atgcaattta
     4081 tttagcttaa tacttgcttt tagataattg ctagattttt taatgccttg taatgcttct
     4141 tgcttggttt ttgcgtgttg ctttttgctt agctgtctag ctctttttat cattaaacga
     4201 ttaaacttag ctaatggttt aggtgctttt atctctaagc cattagataa acttaaaaac
     4261 gattttaagc ctacatctat gctaagtgct agattattat ttttagcttt attatgagtt
     4321 tttagatact catctttact aatttgcata ctaaaagaaa caaagaattt atcagcactt
     4381 tgagaaatag taaaagaatt gattttacca ttaaatctca atttctcttt catttttaca
     4441 agtcctaaat ttggcacttt tagatatttt tcatctttga ttattgcttg gtctccacct
     4501 atgtaataag agccgaaatt atctttcttt ttcttaaatt ttggatagct tactttacct
     4561 tgttttaaat ctctaaaaaa tttttgaaat gctagattta gatttaaaaa aggctgttgc
     4621 gtagcatatt tacttacttc ataaacgaaa ggaaattgtt ctttttttat aacattaaac
     4681 tcttttttaa gctctaaatg agatttttta atgccttgct tatagtattc ttgccattta
     4741 gcaagtcccc aattataagc aagtctagca caaccaaagg cttttttaaa atgagtttta
     4801 gctttattat ttggctttaa ctctatctta tgagaaatgc taataagctc attattattt
     4861 gctgacattt tctaccacca cttcttgcat ttcatctaaa agttttttat ttttctttga
     4921 gcgtgagcca taaagtctag ctgaaaatac tgtgattatt tccaacacat ctttggctaa
     4981 ttcttcttca aattttacgc tttcttcgcc tttatttatt attattactt ctacttcttt
     5041 ggcttcacat atagcaaata ctagctcagc accaaagcgt aaaagtctgt ctttgtgagt
     5101 taaaactaat ctttttactt tgccatctag aatttgattt agcaatttag ttaagccttt
     5161 tttataataa ttcataccag agcctaaatc ttgtataact tcataattaa agccttgttt
     5221 agaacaatat agctctaaga cttgaacttg ccttattaaa tcatcttttt ggtcgtggct
     5281 agaaacacga gcataagcaa tagtttttaa gctatcttta ttaaaaacta ggtttttatt
     5341 tatagctttt aatgtttcta gcttatacct acgctctcca cccttagtca tatcatcagg
     5401 ttttaataag ccttttttat cccaatttct aagagtttgg atagtaacac caagagcttt
     5461 actagcttga ccgattgata ataatttatt cataggacta ttttagcaaa ttttaaaaaa
     5521 taagtcaagt aaaatctata aaatatttat ataattttat agattttttt ataatttact
     5581 tagcagttat aagcccttaa agctgcaccc acgccaaaac caagctgttc aagaataagt
     5641 aaaatacaag ctacactaat acttacactt ataaaagcta atgccggagt agcataatct
     5701 tttagcaaaa gccaaactat caatcctaat gagaaaaaac ccaataaagc taaaaaaatt
     5761 tccatatcct atccttttgt atc
//
LOCUS       DAPIVO010000148         2402 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CGY_HR_130
            SAMN06270756-rid18266443.guided.104, whole genome shotgun sequence.
ACCESSION   DAPIVO010000148 DAPIVO010000000
VERSION     DAPIVO010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270756
            Sequence Read Archive: SRR5209609
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2402)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2402)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768296.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768296.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:11:52
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,818
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 31 of 42
            Pseudo Genes (incomplete)         :: 10 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2402
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270756-rid18266443.guided.104"
                     /isolate="CGY_HR_130"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Calgary, Alberta"
                     /lat_lon="51.0486 N 114.0708 W"
                     /collection_date="2005-06-24"
                     /collected_by="Calgary Health Region"
     gene            26..799
                     /locus_tag="RJ239_001816"
     CDS             26..799
                     /locus_tag="RJ239_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OXA-61 family class D beta-lactamase OXA-193"
                     /protein_id="HDV7331904.1"
                     /translation="MKKITLFLLFLNLVFGQDKILNNWFKEYNTSGTFVFYDGKTWAS
                     NDFSRAMETFSPASTFKIFNALIALDSGVIKTKKEIFYHYRGEKVFLSSWAQDMNLSS
                     AIKYSNVLAFKEVARRIGIKTMQEYLNKLHYGNAKISKIDTFWLDNSLKISAKEQAIL
                     LFRLSQNSLPFSQEAMNSVKEMIYLKNMENLELFGKTGFNDEQKIAWIVGFVYLKDEN
                     KYKAFALNLDIDKFEDLYKREKILEKYLDELVKKVKNDG"
     gene            complement(884..1768)
                     /locus_tag="RJ239_001817"
     CDS             complement(884..1768)
                     /locus_tag="RJ239_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HDV7331905.1"
                     /translation="MIRIDINHPMNTAKGRLDLNFKKDIESGKITALFGESGAGKTTL
                     LKIIAGLIKPKLGRIEVDNELWFDSSKNFSLALQKRKIGFVFQDYALFPNMNIKENIA
                     YAASSKAKVSELLALMKLENLAKIYPKHLSGGQAQRVALARALAREPKILLLDEPLSA
                     LDFKMRANLQDELTKILEYFKISTLLVSHDLAEIYKLSHRILELKNGKIIKDFPKNEF
                     FTHSNISAKLRLSATLLEIKKSDILVVLTLLLNQDIIKITLSEEEFLKAYQDVKIGDT
                     LLLSIKAFNPIIVGKLDK"
     gene            complement(1765..>2402)
                     /gene="modB"
                     /locus_tag="RJ239_001818"
     CDS             complement(1765..>2402)
                     /gene="modB"
                     /locus_tag="RJ239_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HDV7331906.1"
                     /translation="FKLAFITTFILFFIGVFLAYLLSFVRFPFKTILQSFISLPLILP
                     PSVLGFYLLVTFSANSFLGQVLKEYFNLSLVFSFEGLVFASLIFSLPFMVNPLQSAFS
                     SINPNLLDASYSLGKSKIYTLFRVILPNSKAGIFSACAMSFAHTVGEFGVVMMIGGHK
                     QGETLVASIAIYDELEILNYSLAHQYAFILFIFSFLVLFSLYFINKKMSFQ"
BASE COUNT          917 a          341 c          344 g          800 t
ORIGIN      
        1 aattatttaa atagaaagat attttatgaa aaaaataact ttatttttac ttttcttaaa
       61 tttagtgttt gggcaagata agatattaaa taattggttt aaagagtata atacaagcgg
      121 cacttttgtt ttttatgatg gaaaaacttg ggcgagtaac gacttttcaa gggctatgga
      181 gactttctct cccgcttcca cttttaaaat ttttaatgct ctaattgcac ttgatagtgg
      241 tgtgataaaa actaaaaaag aaatttttta tcactataga ggtgaaaaag tatttttatc
      301 ttcttgggcg caagatatga atttaagttc agctataaaa tattctaatg ttcttgcttt
      361 taaagaagtg gcaagaagaa ttggtatcaa aactatgcaa gaatatttaa acaagcttca
      421 ttatggtaat gctaaaattt ccaagatcga tactttttgg cttgacaact cactaaaaat
      481 aagcgctaaa gaacaagcaa ttttgctttt tagactttca caaaatagct tacctttttc
      541 tcaagaagca atgaatagtg ttaaggaaat gatttattta aaaaatatgg aaaatttaga
      601 gctttttgga aaaacaggtt ttaatgatga gcaaaaaatt gcttggattg taggttttgt
      661 gtatttaaaa gatgaaaata aatataaggc tttcgcgcta aatttagata ttgataaatt
      721 tgaagattta tataaaagag aaaaaatttt agaaaaatat ttagatgaac ttgtaaaaaa
      781 agttaaaaat gatggctagt gagtatttcg taaaatgcaa aaatacttaa ttgtatgatt
      841 tgcgtacact taaagtactc attaaaaaat taaatttttg ctcttattta tcaagttttc
      901 ctacgatgat agggttaaag gcttttatgg atagcaaaag cgtatcgccg atttttacat
      961 cttgataagc ttttagaaat tcctcttcac taagagtgat tttaataata tcttgattta
     1021 aaagcaaggt taaaaccact aaaatatcac tttttttaat ttctagcaaa gttgcactta
     1081 agcgtaattt tgcgctgata tttgaatgag taaaaaattc atttttagga aaatctttaa
     1141 taatttttcc gtttttaagc tctaaaattc tatgacttaa cttataaatt tcagctagat
     1201 catgacttac caataaagta cttattttaa aatactctaa aatcttggtt aattcatctt
     1261 gtaaattggc acgcatttta aaatccaaag cactcaaagg ttcatctaaa agcaagattt
     1321 ttggttctct tgctaaagct cttgctaaag ctactctttg tgcctgcccc ccacttaaat
     1381 gtttaggata aattttagct aaattttcaa gcttcattaa ggctaaaagc tcgctaacct
     1441 ttgctttaga actagcggca taggcgatgt tttcttttat attcatattt ggaaaaagcg
     1501 cataatcttg aaaaacaaaa ccaatttttc ttttttgtaa agctaaacta aaattttttg
     1561 aagaatcaaa ccaaagttca ttatctactt ctatacgccc caatttaggc tttataagtc
     1621 ccgctatgat ttttaaaaga gtggtttttc ctgctccact ttcgccaaaa agtgcagtaa
     1681 tttttcctga ttctatatct tttttaaaat ttaaatccag tcttccttta gcggtattca
     1741 taggatgatt gatatcaatt cttatcattg aaaactcatt tttttattga taaaataaag
     1801 actaaaaagt actaaaaaag aaaaaataaa caatataaaa gcatattgat gggctaagct
     1861 atagtttaag atttcaagtt catcataaat agctatacta gccactaaag tttcaccttg
     1921 tttatgtcct cctatcatca tcacgactcc aaattcaccc acagtatggg caaaactcat
     1981 cgcacaagca ctaaaaattc ctgctttaga attaggtaaa atcactctaa aaagagtata
     2041 aattttactt ttacctaaac tataagaagc atcgagcaaa tttggattga tcgatgaaaa
     2101 ggcactttgc aaaggattta ccataaaagg caaagaaaaa atcaaagaag caaaaacaag
     2161 accttcaaaa ctaaaaacca aagaaagatt aaaatattct tttaaaactt gccctaaaaa
     2221 actattagcc gaaaaagtta caagcaaata aaatcccaaa acactaggag gtaaaatcaa
     2281 aggcaaggaa ataaagcttt gaaggattgt tttaaaagga aaacgcacaa aacttaacaa
     2341 ataagctaaa aaaacaccga taaaaaaaag gataaaagtc gtgataaaag caagtttaaa
     2401 ag
//
