LOCUS       DAPIWB010000001        51687 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.001, whole genome shotgun sequence.
ACCESSION   DAPIWB010000001 DAPIWB010000000
VERSION     DAPIWB010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 51687)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 51687)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..51687
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.001"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            9..1130
                     /gene="dnaJ"
                     /locus_tag="RJ266_000001"
     CDS             9..1130
                     /gene="dnaJ"
                     /locus_tag="RJ266_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HDV7353797.1"
                     /translation="MEISYYEILEITQNADKETIKKAYRKMALKYHPDRNQGDKEAED
                     KFKLVNEAYEVLSNDEKRAIYDRYGKDALKGGGFGSSSSGFGGFEDLGDIFSSFFGEG
                     FGSSRRRKSSNDEKIPSDFIVNLKLSFKEAVFGCKKNIDFTYKCSCKTCNGTGAKDGK
                     LQTCPKCQGRGQVGVSQGFITFAQTCPDCQGIGEKASEKCSDCKGLGYNESKDSVELN
                     IPEGVDTGMKLRVNAKGNILKNGTRGDMYVKIIAAEDDTFIRDDDDIYIEFPVFFTQA
                     ILGESIKVPTIRGEATLNLPKGAKDGQRFVLEKEGVKDVHSSRMGNQIVQISIKFPTS
                     LNDEQKELLEKLSESFGIKDGMHQEQKGLFEKITNWFKS"
     gene            complement(1245..2525)
                     /locus_tag="RJ266_000002"
     CDS             complement(1245..2525)
                     /locus_tag="RJ266_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major outer membrane protein"
                     /protein_id="HDV7353798.1"
                     /translation="MKLVKLSLVAALAAGAFSAANATPLEEAIKDIDVSGVLRYRYDT
                     GNFDKNFLNNSNLNNSKQVHKYRAQVNFSAAIADNFKAFIQFDYNAVDGGTGVDNATN
                     AEKGLFVRQLYLTYTNEDVATSVIAGKQQLNIIWTDNGVDGLVGTGVKVVNNSIDGLT
                     LAAFAVDSFMAAEQGSDLLGQSTYVGNSTNNNDSFKLDSIGNLYGAAAVGSYDLAGGQ
                     FNPQLWLAYWDQVAFFYAVDAAYSTTIFDGINWTLEGAYLGNSLDSELDDKTHANGNL
                     FALKGSIEVNGWDASLGGLYYGDKEKASTVVIEDQGNLGSLLAGEEIFYTTGSRLNGD
                     TGRNIFGYVTGGYTFNETVRVGADFVYGGTKTEAANHLGGGKKLEAVARVDYKYSPKL
                     NFSAFYSYVNLDQGVNTNESADHSTVRLQALYKF"
     gene            complement(2777..3232)
                     /locus_tag="RJ266_000003"
     CDS             complement(2777..3232)
                     /locus_tag="RJ266_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HDV7353799.1"
                     /translation="MKKILFICLGNICRSPMAEFIMKDLVKKANLEKEFFISSAGTSG
                     EHDGESMHYGTKNKLAQLNIEHKNFTSKKLTQKLCDESDFLITMDNSNFKNVLKNFTN
                     TQNKVLKITDFSPSLNYDEVPDPWYSGNFDETYKILSLACKNLLVFLSK"
     gene            3286..4470
                     /locus_tag="RJ266_000004"
     CDS             3286..4470
                     /locus_tag="RJ266_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7353800.1"
                     /translation="MENFNRTLLVCWFGVFTTSMGLSQIAPILPFYIKELGHVDTSEI
                     AFYSGLAFGITPLFMAVFSPLWAFLGAKYGYKNMLLRASFGMSVLTLWLSFAHSALEV
                     VFVRGLTGIISGFTSAAVVFIAVIAPKEKVAYALGTLSTASISGSLLGPLFGGFVAEF
                     FSISTVFDMVAFLIACSFVTIYFFIHERKIQKEAKKNTQKVKENKTLIIVLFITTFVI
                     QFGTFGVMPILSIYVEQIHQGGNLALWAGIVVAASGISNLFFAPKLGKIADKIGPSKI
                     IFGALIFCGICFYLQAVVSNVYTLIFMRLLIGVGLGGLLPCVNALLKKSVSAKNLSVI
                     FGFNQTCQFLGNFCGAFGGGLMASHFSVEFVFTFVCLIFIINAFIFLAFEKKYIFSNQ
                     GL"
     gene            4488..5150
                     /locus_tag="RJ266_000005"
     CDS             4488..5150
                     /locus_tag="RJ266_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HDV7353801.1"
                     /translation="MEMILFVLVMILLVLLFVVLFRQYKSPKIEEKSTQSFSDIMQLK
                     SIGELSVFQVFSKEIVTKKDSAFNGIWKNLLGWSLSERQIALIFEFEITFLYDLRDKN
                     FDILPLGDDAYKIIMPECRYKHSIIDMKFYDEKNAKFLPFLLPDSINSTGISFSESDK
                     NKLIKEAKDEVKDLSLNLIQNLESKIHKSAKDTLEAIAKGFGAKRVEFEFKDNTQKLD
                     IN"
     gene            complement(5189..5671)
                     /locus_tag="RJ266_000006"
     CDS             complement(5189..5671)
                     /locus_tag="RJ266_000006"
                     /EC_number="3.2.2.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-deoxyinosine glycosylase"
                     /protein_id="HDV7353802.1"
                     /translation="MSEFLTHPFEPFFDKDSKILILGSFPSVKSRQDGFYYQHPRNRF
                     WPILETLFDVRLENITEQQAFLRKKHIALWDVLQSCKIKNSDDKTISYAKANDLSPIL
                     SQTKIQAIFTTGQSAYKFFIKFHPRLKAIALPSTSPANLNFSFEQLLQNYEIIKKFTK
                     "
     gene            complement(5668..7827)
                     /locus_tag="RJ266_000007"
     CDS             complement(5668..7827)
                     /locus_tag="RJ266_000007"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HDV7353803.1"
                     /translation="MQYSIEINKNTEIFNIDKVAKQAAGAVLMRQGKSVVLATVAREE
                     KQVEEDFLPLTVQYIEKAYAAGKIPGGYVKRETKPSDAETLTARIIDRSLRPLFPKGY
                     AYPTQIVVMVLSADPKVDLQVMSLNAASVALYLSDIPMKAPVCGVRIGKIDGNFILNP
                     NNEELQNSTLDLYVAGVKDELLMIEMRALPDQKENEIFIEAPYADVLTQTTSQNMNEL
                     SEDEILEALNLAQKAILNGSNAYEEAFSKHEKNSQIELKNEIEYPEILAFIENNFQKQ
                     IKEAINQMAKSERASELNKIAKEISNLEIAKEWSEESVLNTLAKVKRKLIREQILNEG
                     KRADGRSLNEVRPINIETNILPNAHGSCLFTRGQTQALVVATLGGENDAQMIDLLTEK
                     NPISERFMVNYNFPGFSVGEASPIKAPGRRELGHGNLAKRALYPSVDENYPYVIRLVS
                     EILESNGSSSMATVCGGSLALKAAGVPSLKLVAGVAMGLIFEDNKYAVLTDIMGLEDH
                     DGDMDFKVAGSKDGITALQMDIKLGGIDQEILKQALYQAKEGRIHILNIMEEAAKEII
                     VNEEVLPKLELFSVDPSKIVDIIGQAGKTIKEIVEKFGVSIDLDREKGEVKIAGSQNE
                     QIKAAKDYIINITSSQKGTKKGSKDKDISGFELGQEFQGIVKKIAPFGAFVELKNGVD
                     GLLHSSKSKHLNLSENQSLKVKISEIKNGKISVDLCE"
     gene            complement(7897..9945)
                     /locus_tag="RJ266_000008"
     CDS             complement(7897..9945)
                     /locus_tag="RJ266_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HDV7353804.1"
                     /translation="MWRKFSLLLGTSIALNAAQVDIYALDAKKEGDILTANNDVIIFS
                     DFYFITANKAIYNEKTGDVELFGDVNILRGQNERSHSDYAKINLNSNQADFSNFFFSN
                     NNLEVWFQSKTSHLNDKVFESKVSAVSSCNVEDPDWEIRFSKGWLNRETNFVHLYNAR
                     LYVKNTPVFYLPYFGFSADTHRQSGLLIPKIVLKSSEGLYYEQPIYIATQENWDLELD
                     PQIRTNRGFGLYSTLRFLDSPYSTGELNFGAFRENSSYFHDENLKNQTHYGIELKYSR
                     DDLIKSLLSDNFQEGLWIDATYLNDVDYLNLGSRDYRDLNSLVTSKINYFLADENNFY
                     GAYARYYIDTSKLSNNTTLQEYPSFQYHRFLNNLFDERLRYSFDASFHNFYRPAGSYA
                     NELNLDLPISYHNAFFGDFLHFTFTERFYASFVNYSNNPERNHEHYFRNTHDFNLYTD
                     LSKAYENFFHTLNLGVNYVLPGAKSGKITQDYLEEYDKENEHTSLYTVQYFYNNEGQK
                     KLKHRISLDYLNKQNEFYELENLLTYYFNENINLNSEVLYSYEQSRFTNVISQIEVNT
                     NSKFNWMFSHAYQNDEYGKYSFIGTRANYIATPNYNLFGGIWFDTQRAHANMWELGYT
                     YQRKCWNYSLMYRERIDPQLTSGGITAKNQSGVYFIFNFYPLGGVKYDFSLAESENKI
                     "
     gene            complement(9935..10387)
                     /locus_tag="RJ266_000009"
     CDS             complement(9935..10387)
                     /locus_tag="RJ266_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HDV7353805.1"
                     /translation="MKENLQDRLERENLKIASFGKRVLAFLIDDMVISLIVFIIFYDR
                     LIQAKDLFETTQIVGNFYLGFILLHFSYQAIFTYLYGASLGKILCKIIILDENLLDKP
                     NLIQSCIRSAVRQVSAMAFMLGFAWALSNDLRKAWEDYLARTIVVDVA"
     gene            complement(10384..11634)
                     /gene="purD"
                     /locus_tag="RJ266_000010"
     CDS             complement(10384..11634)
                     /gene="purD"
                     /locus_tag="RJ266_000010"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HDV7353806.1"
                     /translation="MKIMILGSGAREYSIALALRRVDKNLEFYFAPGNGATESLGTNL
                     NLKDPVVLATYAKEKGFDLCIVGSESFLAEGVVDIFKQQGLAIFGPSKAAAMLETSKS
                     FMKSFLKKYRIKTAKFLNTNDIEKAKNFIYSLTPPIVVKADGLCAGKGVIIAKTHEEA
                     IEETAKMLSGESFGDAGKLVVIEEFLDGYELSIFAVCDGNDFVLLPAAQDHKKLLDND
                     QGPNTGGMGAYAPSSLANESLLRKVQKDIILPTLAGMKKEGAEFCGVLFIGAMIVGNK
                     PYVLEFNVRFGDPECEVLMPLIEDPLELILAATQRRLRHSKIKIKKEFAVGVVCASEN
                     YPYKSSPKSEITVNNIPENSHISYAGVSLEDGKLMADGGRVLVCVGTGKSIEEAQKNA
                     YKLCDNVNFKGKQYRKDIAHQVLK"
     gene            complement(11874..13334)
                     /locus_tag="RJ266_000011"
     CDS             complement(11874..13334)
                     /locus_tag="RJ266_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7353807.1"
                     /translation="MHGKIAIYMDSTGRGTVTNSANTFFDFNRQIWNDKKSMPSVGML
                     VEFRTLSSEKKAEDGKLVQTSKTITGIKPSKFQEFKEGDFITEHDFWKTDNDDELEDL
                     QNSRRSAYITELYRTTDFDTIEKIPLSFTIPQAIQKYFAHEILSVETLQANLQDEKEI
                     PCILDYLILKRFLFKAYDTLIFMDNSIDQTQFSALKSIMMHLENSYKQMIADQKPNIT
                     KIFNETFLSLQCHYQALVATIDTRKNRLASLEAQMKTLQSEINLKSNATDADPEKLKA
                     RQERLAKLQKEAEYYRTTLKRLDAIREDFYKKNYNIFENAFKLSREKLFKKIVTGLNL
                     CATIMDVKIWHLSLKSSGVKNSYFTMSNIENSFCSLSFAEHYLSRLNKSALNPFDQKL
                     LVYIQKITKEQRKKFLVVTSDLDLLCKLKIENFSQNPYYLVKYAPKKVNYQSLMRDNT
                     FDIVYIDEKHVWENVADIILQGKHFDKSGKTKFKLI"
     gene            complement(13420..14955)
                     /gene="guaA"
                     /locus_tag="RJ266_000012"
     CDS             complement(13420..14955)
                     /gene="guaA"
                     /locus_tag="RJ266_000012"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HDV7353808.1"
                     /translation="MKKADILVLDFGSQYTQLIARRLREQGVYAEILPFNVSLADIKA
                     KEPKGIILSGGPASVYATDAYFCDKGIFDLNLPVLGICYGMQLMAHHYKATVAPAGHK
                     EYGKANIEIKKDNALFKNLPKKQTVWMSHSDKVENLPQGFEVLATSENSPFCVFGNED
                     KKFFALQFHPEVQHSEFGKNILKNFAKYACNCESIWNMGSFAKTQAEKIREEVGNDKV
                     LCAVSGGVDSSVVAALLASAIKEQVIVVFVDNGLLRSGEKEQVEFMFKNTLGIDLISI
                     DASEIFLSRLANVTDPEQKRKIIGNTFIEVFEEEAKKHKDVKYLAQGTLYTDIIESSV
                     VGSSKTIKSHHNVGGLPEKMNLKLIEPLKEIFKDEVRALGLELGLSKEVVYRHPFPGP
                     GLAIRIMGEVNRASLELLRKADVILLEELKSTGWYDKTWQAFCVLLNVKSVGVMGDNR
                     TYDNAVCIRVVDASDGMTATFSHLPYEILENISRRIINEVEGINRVVYDISSKPPATI
                     EWE"
     gene            15094..15588
                     /locus_tag="RJ266_000013"
     CDS             15094..15588
                     /locus_tag="RJ266_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7353809.1"
                     /translation="MGKRNNIKMTKNASAVINELMDKPHYKPLKTLFFCKDFLSSFPL
                     AKQRLIAKIYVKNHILNIITLHPAAYQELNHDDSKIYIKFLIKAYGQKYPLSGFVDIK
                     DIKIFSQKYTYAANKNKNDEKLSKNSYLELSKGEFKNCFEDEKLFKKFEDLRELIKKG
                     SNLD"
     gene            15581..17383
                     /gene="uvrC"
                     /locus_tag="RJ266_000014"
     CDS             15581..17383
                     /gene="uvrC"
                     /locus_tag="RJ266_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HDV7353810.1"
                     /translation="MIKENLENELKTLPNSTGVYQYFNQEGKLLYVGKAKNLKNRVRS
                     YFAFTPNLHANPRNSLRIQKMIEETVHLEFIATNSEADALILENSFIKQLHPKYNILL
                     RDDKTYPYIYVDFEEEFPRFEITRKLVKKSKIKYFGPFFKGARELLDALYLYYPLKQK
                     ASCKSPCIFYQISRCLAPCDKLISKEKYLEILDEAMHALLNPSVLLKNLEKQMLVLAQ
                     NENYEEAAKVRDQIAMIKDLEVKVEIDIAKLEDFEVFALAFENSMLSTLRFVVQNGKI
                     ISANSKITSIKNDIQWDQNEIYKQLILENFSMDIPLLANVIYVYEEFEDRVLLEEILN
                     QRFDKKISIKIPKIGEKRRICDLAFQNALLNIEKEQKNHDFTIQKELKFYFELENLPN
                     DIEIFDNSHLQGVANVGAMVTYRINSWDKSKYRKFHLKHKNDYDQMREVLTRRALDFD
                     KIPPPDLWLIDGGKALLDLAKEIIVSSGANVDILAISKEKIDAKAHRAKGGAKDKIHS
                     LKGEFSLSINDKKLQFLQKLRDEAHRFAISFHQNTKKKQDLKSSKLANLGLSSGVIQK
                     LLAYYGNFESIYKADFKDLTMLVGRKAAQKIKEN"
     gene            17385..18581
                     /locus_tag="RJ266_000015"
     CDS             17385..18581
                     /locus_tag="RJ266_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7353811.1"
                     /translation="MILAGIIFIFNLILAYLSIDISKLDSVTEQLKIGMFSSIFVLSL
                     TLFIFAFRQNRNINKIYQKIFCMQNDFLNFQKKIDVDSALDLLKEKFETTGQNLTKIS
                     HEKDRYLHLLEENLYQLGNISNAMRCLNEGYNKEINSLILNALNSQKDQIRLELNEAL
                     EHLKSIIGTSHGKVLQFEASVAIVNNDELENFLLANLLSYFGIESTCFKNLSFDVNDF
                     HLIFIKDKILNENVKKNYDFIVMGRHKNTHYEYFLTLPFEKKDLENILQNKLDKVCTL
                     KFKTPYQNNVLLFKQNDFDATLFFNIIEKQCDKNICINSFSQLKQELSKETYRLILLD
                     YELIKFDLEQMRNLLSAYKKQHPQSHIIFFSKEKIRDFDCVSEVLSDVSRNDLITLLR
                     KYLPKA"
     gene            complement(18578..19480)
                     /locus_tag="RJ266_000016"
     CDS             complement(18578..19480)
                     /locus_tag="RJ266_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HDV7353812.1"
                     /translation="MKILFGPVSSRRFGRSLGIDLSPSKKQCNFDCVYCELNPKKAQE
                     KQDEIISIDKIISEVKVVLEKNVEFDFLTLTANGEPSLYPHLNELILSLRSIAKDKKL
                     LILSNGTAVLDGDKFNALLKLDVVKFSLDSAVAKTFYRIDRALKNIDLEKMIEKMADF
                     RARFNGDLIMEILVVKDLNDNEEEFKALNQALKKIMPLRVDLSTIDRPPAYAVKKVSE
                     EKLLELSKLIDSTPVLLAKRHYEGEKLSFNEEELLKMLHLRSQSEIDIEVKFDEQSKT
                     LLNQLIKEKKVKILDLAGVKFYKV"
     gene            complement(19477..20499)
                     /locus_tag="RJ266_000017"
     CDS             complement(19477..20499)
                     /locus_tag="RJ266_000017"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HDV7353813.1"
                     /translation="MIFIDACFKKPTPYTPIWMMRQAGRYLPEYMEVRKQAGDFLSLC
                     KDYKKASEVSLQPIDILDVDAAIIFSDILVVPLEMGMNLRFEKGEGPVFDNPISTLED
                     LEKLDDQNAHKKLNYVYDTLKLTREKLSQNKALIGFCGSPWTIATYMIEGSGSKNYAK
                     CKKMLYQNPELLHKILNKLTQVLKLYLEEQIKAGANAIQIFDSWASALEYDKFFEFSF
                     NYMLEISNFIKGKYPNIPVILFPKGISGYLDRIDGNFDVFGVDWSTPLDLARDKLSHK
                     YTLQGNMEPCRLYDKNAIKEGVEKILKTMQNKAHIFNLGHGILPDIPVENAKYFIKLV
                     QESSAK"
     gene            complement(20679..20999)
                     /gene="ciaC"
                     /locus_tag="RJ266_000018"
     CDS             complement(20679..20999)
                     /gene="ciaC"
                     /locus_tag="RJ266_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion antigen CiaC"
                     /protein_id="HDV7353814.1"
                     /translation="MVVDNTQKTSNAIFSTTTKVKEKNTSADEFQATLNEVKNKEEKE
                     EEKTSSSKFTNEDIDLSAAREDFRSYAWQKMREDQYKKNEETLLNKLFATIDAGNATN
                     NTKA"
     gene            complement(21055..22254)
                     /locus_tag="RJ266_000019"
     CDS             complement(21055..22254)
                     /locus_tag="RJ266_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7353815.1"
                     /translation="MQNYKKALFALALSAFCMGVTEFVMAGVLVDVEAYFSVDAKTAG
                     YLTTLYAIGVVIGAPLITIPLSRFHRHIQLLSNLGIFALANFIIFFSQNFYLTAFARF
                     IAGTQHGVFFVIATLAVSAITPDDKKSSALAIMVTGLTVALVTGVPLGTFIGHYFGFK
                     FIFLLIFIITSLAFFGVWHMMPKNLHPSPTSLKNLIPAFSHQNLLKTYTITICSCGAQ
                     FVLYTYLQKLLVEISGFKVQDTAYILLLYGICAICGNLWGGKIVDKKGAIFSLRLILS
                     IQVLVFLSVFLTMHSKILIIFSVALIGFFAFSTIPALKMLSITKAKRHTYKVIDSTIS
                     VNEAAFNVGIALASFLGGIVLAGLGIEFNALFSALFVSPALIFALLFAKDKLNYKKFQ
                     RKSFKKI"
     gene            22367..22969
                     /locus_tag="RJ266_000020"
                     /pseudo
     CDS             22367..22969
                     /locus_tag="RJ266_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866235.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(22959..24053)
                     /gene="pdxA"
                     /locus_tag="RJ266_000021"
     CDS             complement(22959..24053)
                     /gene="pdxA"
                     /locus_tag="RJ266_000021"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004305609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase"
                     /protein_id="HDV7353816.1"
                     /translation="MKKLAISIGDINSIGLEILVRSHEELSKICTPFYFIHENLLDKA
                     SKLLNLKLFNAKIVAFKDGKDYEFNFIKKENSLEIYSFCLPLGFKVDENFEIKAGEID
                     AKSGLYGFLSFKAASYFVYEKHAHALLTLPIHKKAWEDAGLKYKGHTDALRDFFKKNA
                     IMMLGCKELFVGLFSEHIPLAKVSKKITFKNLSIFLKDFYKETHFKKIGLLGFNPHAG
                     DYGVIGGEEEKIMEKAIAFVNAFLHSKKDEKFFKKALKDENLKKELLLNFKGKGVYLP
                     YPLVADTAFTKAGLKNCNRLVAMYHDLALAPLKALYFDKSINVSLNLPIIRVSVDHGT
                     AFDKAYKNAKINTKSYFEAAKFAIDLSPKT"
     gene            complement(24050..24823)
                     /locus_tag="RJ266_000022"
     CDS             complement(24050..24823)
                     /locus_tag="RJ266_000022"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HDV7353817.1"
                     /translation="MLLGVNIDHIAVLRQARMVNDPDLLEAAFIVARHGDQITLHVRE
                     DRRHAQDFDLENIIKFCKSPVNLECALNDEILNLALKLKPHRVTLVPEKREELTTEGG
                     LCLNHAKLKQSIEKLQNANIEVSLFINPSLEDIEKSKILKAQFIELHTGHYANLHNAL
                     FSNISHTAFALKELNQDKKTLQAQFEKELQNLKLCAKKGVELGLKVAAGHGLNYKNVK
                     PVVKIKEICELNIGQSIVARSVFTGLKNAILEMKELIKR"
     gene            24880..25854
                     /locus_tag="RJ266_000023"
     CDS             24880..25854
                     /locus_tag="RJ266_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HDV7353818.1"
                     /translation="MLGIDLGSNTLRAVQMDEKLNKLKEYEFVIGAAKNLNQSGEISK
                     EAIQRLKNTLSILAKEQDLSKARAVATAAFRKASNTNEIFAHLKKEFGIDFKLIDAKS
                     EAKISVLGMQSGLRRLKIWGEFAYCDLGGASCELSFGKSFKSFDFGIISFYEKNYHSY
                     YKSCISYKKLIKKYPKFIINIKDKKLKIHFLIANPYLKHLAFRAFDEVAMIKKELRSL
                     GVKTVVLNSGVPTTLSALKQNISYEKYEASRVNGKKLYHKDFLNYAIKLFHMEEKKAI
                     KEVGAMRKNYLSAGCLLFYALFDKHKLLVIDEGLREGVCLASMKNIKF"
     gene            complement(25851..26801)
                     /locus_tag="RJ266_000024"
     CDS             complement(25851..26801)
                     /locus_tag="RJ266_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HDV7353819.1"
                     /translation="MKFSDFFHAWLHESYYKNAVSIGKNGDFFTAVSVGNLFGTLLAK
                     HFLNLIDKKILQLPLELVEIGANEGYLSRDFLAALLELRPEIFSQISFFVIEPHEKLR
                     TLQKKTLEGVEFTHKDSLKECHFKNAFFFCNELFDSFACELIDHDKMAFVENFKLIFK
                     NMDENLITKCKALNLKKGELSLELENFFKDLNQTCERFIFAGFDYGTLNPQSFSLRIY
                     QKHEVFSPFEVSLKDFFGKSDLTYNVNFTHLQKLIKEYDFKPLAFKKQSLALMDFGFE
                     DLLKYTKNKNIKTYESFLSQAKILFFNFDEKFHFFEFQKN"
     gene            complement(26798..27619)
                     /locus_tag="RJ266_000025"
     CDS             complement(26798..27619)
                     /locus_tag="RJ266_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDV7353820.1"
                     /translation="MKALWLFLSFTLWLFGAQNLELIKGQALFLELDKKDFLSLKNND
                     KNIPTFAHPKNQEKILAIFSLPYKNPPQNTKLIAFYKDKKEEIFIKTLEGNYKSEKLQ
                     VENKKIFPPKTIQERIAKELKEANAIYSSYTPKALFNGAFNIPLNSFITSDFGKARTF
                     NEKVASYHSGTDFRAATGTPIYAANSGVVKIAKDRYFAGNSVVIDHGFGIYSQYYHLS
                     KIDVKVGQKIKKGELIGLSGASGRVSGPHLHFGILAGGKQVDPLDFVSKFNAIFQ"
     gene            complement(27616..29610)
                     /locus_tag="RJ266_000026"
     CDS             complement(27616..29610)
                     /locus_tag="RJ266_000026"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HDV7353821.1"
                     /translation="MSELLIEIGTEELPAIPLLKELANIEKKWNNVLEEYRLVSDFKF
                     YYTPRRLVFFHENFADKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKARISENELS
                     FKEIKGKEVLYHQKAIKGLQSQEILGEMVEKFLKSLSFGKSMRWGANSFEFIRAIRSI
                     ACILNDELVNFQSYGVKSTKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRK
                     EKILEQFKLIESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSM
                     RENQRYFAVFNDKGLSNHFIVVSNAVCKDYSKIIHGNERVLRARLSDAMFFYQNDLQN
                     GLKPEKLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENISTALKYAKADLAT
                     QMVYEFTDLQGIMGSYYAQKMGLDYQICLAIKEQYLPNSEQAPLPSTEFSSIVALANK
                     LDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLSNHYKSFD
                     MQILKDFIFERLYTFYTVNASFVKAVLSSHNTDLIHINQSVNALIKLSKKDNFNENFA
                     TFKRLANIATKNPHKVDESLFVQEAESKLYKAFQEKTKANSLQEKLENLFALKPFIDE
                     FFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKELSL"
     gene            complement(29666..30286)
                     /locus_tag="RJ266_000027"
     CDS             complement(29666..30286)
                     /locus_tag="RJ266_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDV7353822.1"
                     /translation="MINVFFDMDGTLIDSANAISCAVNEIRQDLNLAPLSREIIMQTI
                     NTPNIDWAKELYNIENFHHSSFKEGYEKYFVKHYEQSVVLFEGVKELLEFLKSKNCFL
                     AIATNAPQSSLSNILKKHDIIPYFDKILGVSLGIEPKPHPMMLELLKSEAPYKTSVFI
                     GDSQKDKECAKNANLPYFHAKWYQKNLKENEFSNASELKGFLQKYL"
     gene            complement(30283..30615)
                     /locus_tag="RJ266_000028"
     CDS             complement(30283..30615)
                     /locus_tag="RJ266_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7353823.1"
                     /translation="MTKNEEKALRVKYLRNLEKFFNGAISALKKEDFDKTKFEERMLK
                     NAKFFEKNPAVNLNSTYAKNLEFFVNACLDFSKEKSELLNLANALDKQKKQGEKKEKH
                     KNYLKDYE"
     gene            complement(30625..32250)
                     /locus_tag="RJ266_000029"
     CDS             complement(30625..32250)
                     /locus_tag="RJ266_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDV7353824.1"
                     /translation="MDNFLEIFLITVAIAIVLNVIFKKFEIPTIIGYIAAGEIISEIY
                     HLSGKGEITHIAEFGIVFLMFTIGLEFSFKHLMAMKQEVFLNGSLQMLTCGFVFMLLA
                     IGILGLGDKSATIVGFALALSSTAVVLKILNDNGDINEQYGRKALGILLFQDIAVIPL
                     LLLVDIFSSNNQNIEKLLFTSLISALILITLLFFIGKYLVDRIFRLIIHTSSQEIFIS
                     TVLFMVIGASFLANYFGFSYSLGAFIAGALIAETKYKHKIEADLIPFRDLLLGLFFIT
                     VGMQIQLDVVAQNWFLIIVLTLLVMALKFGIVFGFLFLYTKKRVALKTAFAIAQIGEF
                     ALAIFSLLQAKNMLDIKTSQILIVVSILTMIITPFILNNIRKITNVVEDIALNTNAVQ
                     NIDSNIKLKNHLVVFGYGRLGQEVVQKIKNTGVPYLVLESDLNLVELGVSRGENVVFA
                     NAAQEETLKIANIEECAVAIITVTNEAKLEILCQVLANYPKPIDTIIHVNGTLKKMLF
                     SSIDENIRIIRSEKVIARNLVQEALECRIHKNT"
     gene            complement(32256..32630)
                     /gene="hspR"
                     /locus_tag="RJ266_000030"
     CDS             complement(32256..32630)
                     /gene="hspR"
                     /locus_tag="RJ266_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock transcriptional regulator HspR"
                     /protein_id="HDV7353825.1"
                     /translation="MEQHYDEPVYLISVVAKVLSIHPQTLRQYEREGLIEPSRTDGKI
                     RLYSQRDIDRIKLILRLTRDMGINLAGVDVILKLKNQLHEFENLIDELRLELSKQQDK
                     EAASKAVVKHKNSFDLIFYEKK"
     gene            complement(32646..33539)
                     /locus_tag="RJ266_000031"
     CDS             complement(32646..33539)
                     /locus_tag="RJ266_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ family protein"
                     /protein_id="HDV7353826.1"
                     /translation="MNSLYETLGVSKNASADEIKKAYRRLARKYHPDINKEKGAEEKF
                     KEINAAYEILSDEKKRAQYDQYGDSMFGGQSFHDFSRNTGGVNLDDILKDLFGGGFGG
                     RSRGGFNGFSSKGFSSGFGGFGGFEEEILDSNLELHIPFEKAVKGGEHSFNFQGETIK
                     FKIPHGIKEGEKLRIRSKGKQSRNGARGDLIIIVKIEESPIYTREDDDLYQKVDISLK
                     TALFGGKINIKTLKEGKEEAIINITPNSKNNQKIRLKGYGVQNRKSDIYGDMYLILNV
                     VLPNLDTLDEKFIELLKEKLP"
     gene            33739..35157
                     /gene="htrA"
                     /locus_tag="RJ266_000032"
     CDS             33739..35157
                     /gene="htrA"
                     /locus_tag="RJ266_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease HtrA"
                     /protein_id="HDV7353827.1"
                     /translation="MKKIFLSLSLASALFAASINFNESTATANRVNPAAGNAVLSYHD
                     SIKDAKKSVVNISTSKTITRANRPSPLDDFFNDPYFKQFFDFDFPQRKGKNDKEVVSS
                     LGSGVIISKDGYIVTNNHVVDDADTITVNLPGSDIEYKAKLIGKDPKTDLAVIKIEAN
                     NLSAITFTNSDDLMEGDVVFALGNPFGVGFSVTSGIISALNKDNIGLNQYENFIQTDA
                     SINPGNSGGALVDSRGYLVGINSAILSRGGGNNGIGFAIPSNMVKDIAKKLIEKGKID
                     RGFLGVTILALQGDTKKAYKNQEGALITDVQKGSSADEAGLKRGDLVTKVNDKVIKSP
                     IDLKNYIGTLEIGQKISLSYERDGENKQASFILKGEKENPKGVQSDLIDGLSLRNLDP
                     RLKDRLQIPKDVNGVLVDSVKEKSKGKNSGFQEGDIIIGVGQSEIKNLKDLEQALKQV
                     NKKEFTKVWVYRNGFATLLVLK"
     gene            35233..35907
                     /locus_tag="RJ266_000033"
     CDS             35233..35907
                     /locus_tag="RJ266_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDV7353828.1"
                     /translation="MTNILMIEDDLELAEITAEYLEKFDMKVDIAHEPYIGLSKLALK
                     EYQLIILDLSLPGLDGLEVCEEIRKKYDTPIIVSSARHDITDKVNALELGADDYLPKP
                     YNPKELQARIKSHLRRISNTKSAIAKSVKDLVYDQYKHIITMKGQELTLTNAEFDILS
                     YLIKKEGGVVSREELVYNCSSISEDSSNKSIDVIISRIRQKMGDDPKTPKYIHSIRGI
                     GYKLTQ"
     gene            35904..37151
                     /locus_tag="RJ266_000034"
     CDS             35904..37151
                     /locus_tag="RJ266_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDV7353829.1"
                     /translation="MNKSSIFYTITFIFIFAGVSVILGFLWLIEYDQQNYTRELNTKY
                     SLIANARLLNFAGVISEKEFEEQTKNYNKMDEITEAKQIRKILFRGDVLARVEVNNGL
                     IEIISYNRQVYLNIIYDGKVYLYKDQDYQTYRYFIIKAIAVAVICILVLLYIYIFKKL
                     KPLKRLKKQIDKFAQGKLGDIEDVSTGVDEISQVSEAFYQAIVQIRKLNQSRQFFLRN
                     IMHELKTPITKGLLTLEMIEDNKYKERLNGVFTRLEILINEFAAIEQITSGAAFINRK
                     KYNILDVLDEAKEIAMRDDSNIRIFMEESFFVNVDFKLFTTAIKNMIDNGIKHSEDGF
                     VQIDIIDDYICFKNRGPELNNTLEYYTQAFTQGSKQKSSFGLGLYIVNTILETHGMKL
                     DYLYEDGVNLFYFRNLKSVIVKE"
     gene            37244..37318
                     /locus_tag="RJ266_000035"
     tRNA            37244..37318
                     /locus_tag="RJ266_000035"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:37276..37278,aa:Asn,seq:gtt)
     gene            complement(37409..37657)
                     /locus_tag="RJ266_000036"
     CDS             complement(37409..37657)
                     /locus_tag="RJ266_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HDV7353830.1"
                     /translation="MKRNVKTYSFRMPLELKERLDNLSKNLSKPKSTIVKEAIEAYLN
                     EVEDFSFAVNALEELKDGDYQKASKKIDKIVKNLKQTK"
     gene            complement(37668..38267)
                     /locus_tag="RJ266_000037"
     CDS             complement(37668..38267)
                     /locus_tag="RJ266_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HDV7353831.1"
                     /translation="MLPKWDNSYSVHNAKIDEQHKKLFKLAAKVEVVSDRSVSKNEVK
                     ELLAEFFNYMKDHFNDEEKYMQLIGYPNLEEHRKIHKEIIQTMINLIKDIKSTNDLKE
                     KLYIVAKKWLLEHILYEDMKVEKWRSSSLSTDDGGDVSFEAAEDEDNEHPQFYLYTCN
                     CPGKIHDVPYSIHQKIELQGRKFTCKTCKQAIKFYKKYS"
     gene            38415..39080
                     /gene="dccR"
                     /locus_tag="RJ266_000038"
     CDS             38415..39080
                     /gene="dccR"
                     /locus_tag="RJ266_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator DccR"
                     /protein_id="HDV7353832.1"
                     /translation="MAAKILLLEDDLSLSEIIEEFLNDEGYEVFLCDNAQEALDMAYE
                     RYFDLWILDVKVPLGDGFSLLKELRKSGKQTPAIFMTSLNTTNDLKQGFDAGCDDYIK
                     KPFELAELSIRVKALLKRAFSHKNEDFEDLGDGFRFEFTTQILYHNNKALTLPSKEIK
                     LLSLLLKNKNNFLSTERIFEELWDYDEEPSELSLRAYVKNLRKILGKEKIINQRGRGY
                     CYG"
     gene            39073..40263
                     /gene="dccS"
                     /locus_tag="RJ266_000039"
     CDS             39073..40263
                     /gene="dccS"
                     /locus_tag="RJ266_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     DccS"
                     /protein_id="HDV7353833.1"
                     /translation="MAKKVIRQILLIYLTTTGIFLTIFFALWYQKLYEELVVLKGATL
                     RENHRNIVISILNSRFTPIDISAKNIAQSTALKFAIFDAKKIVFSNIDFDLRKAKIEL
                     KGRGICDNKVFFLASMSADHYFLRHASNEEVNTNDGLQILIQGEDVGKDLFWIRTKVF
                     SFAIMAFCILGLISYILVKIALKPLEDKISTLNRFIKDSTHELNTPLSVILMSIEQLE
                     HQNLGDNTKFTRIKLAAKSLSQVYSDLVFYNFPNTLETEKQKFDLRILLEERLEYFKV
                     FFEQKKITLKLDLNQANIFAPKSQISKLIDNLISNAIKYNKKGGVISIILKANFLSIA
                     DTGCGISKSNLNHIFDRYTRFNTDQGGFGIGLSLVKKVCDDNDIKIICESVENQGSVF
                     KLNW"
     gene            complement(40306..41943)
                     /gene="groL"
                     /locus_tag="RJ266_000040"
     CDS             complement(40306..41943)
                     /gene="groL"
                     /locus_tag="RJ266_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344612.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HDV7353834.1"
                     /translation="MAKEIIFSDEARNKLYEGVKKLNDAVKVTMGPRGRNVLIQKSFG
                     APSITKDGVSVAKEVELKDSLENMGASLVREVASKTADQAGDGTTTATVLAHAIFKEG
                     LRNITAGANPIEVKRGMDKACEAIVAELKKLSREVKDKKEIAQVATISANSDEKIGNL
                     IADAMEKVGKDGVITVEEAKSINDELNVVEGMQFDRGYLSPYFITNAEKMTVELSSPY
                     ILLFDKKITNLKDLLPVLEQIQKTGKPLLIIAEDIEGEALATLVVNKLRGVLNISAVK
                     APGFGDRRKAMLEDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNG
                     AGEKANIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKK
                     DRVDDALSATKAAVEEGIVIGGGAALIKAKAKIKLDLQGDEAIGAAIVERALRAPLRQ
                     IAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSV
                     ASMLLTTEATISEIKEDKPTMPDMSGMGGMGGMGGMM"
     gene            complement(41964..42224)
                     /gene="groES"
                     /locus_tag="RJ266_000041"
     CDS             complement(41964..42224)
                     /gene="groES"
                     /locus_tag="RJ266_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HDV7353835.1"
                     /translation="MNFQPLGKRVLVKRVEETKTTASGIIIPDNAKEKPLMGEVVAVS
                     KEITDIANGDKIVFAKYGGTEIKLDNNEYLVLNLDDILGILK"
     gene            42386..44926
                     /locus_tag="RJ266_000042"
     CDS             42386..44926
                     /locus_tag="RJ266_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7353836.1"
                     /translation="MKKIFYGIVAFVVVLLIALYTILFTSFGNNIVANIAQKKIKENA
                     GLDVNITRFNLRFSSLELQANIANMADCNLQGALSPFKLGFDLDYLISLNQNYAKNLG
                     LNLNRNLSFGGKIQGKASDFTLDGKGYLLGSNVLLNARMYNYSPIALNLDAQNLKIEE
                     ILHLLSYPSYAKGFLNAQAKISAQNLKPDGNIIIKLDTSYINYEAIKKDFSLDLPLNS
                     NPKAEILANVKEDKIYAVSKIYNDYLNLQTQKTLYDMSKNILSTDFNLNIPSLAKLEK
                     LTKTRLNGSLGVIGETSVVNNALSSLNAQVIGLGGEVKASLKNNKIFADINEASLEKL
                     LALAGYGALVSGNLNAKLLNADLDFSNFDLEAKINNAKINTNELKKLAKIELPNTIFS
                     FDAKANAKNSNIAYNALLASNLLNIKKLQGTYNLKNSELNTDLNAFIDDLSQFSAIAG
                     QKLQGKADLTAKAHIIGTQIQNLNANANLADGVIKADSNGKKLDLNIDKLDLSKLFVI
                     AGMPNYASGIVNAKVNLDNIDFSNLNGKANLEAKGILNAATLSKILNKNFPNNTSYDL
                     NTKINFKNNIAQFDSVLNSSLADLTKLQGSFDISKMLLNSDFNLKINDFSKLGFLLDR
                     KLKGKAEFNGKVGFDKNLNFVVNSPNLFEGKLQSTLKDNLLLADLNGVDLSSLAQGLD
                     FMDVYQGKADVKANYNLLSEEGEVNLDMKEGKLKPNLITNALKILTLKDITNDVYRTA
                     NAKALIKKENIKFDLNMQADRSYILVQSGALNSKSGALNLPFDIKLDRANFKGSITGT
                     TENPKVNLNAGSVLNSIKNVVGGGMSDGAKSTGDKVDKAVNKLLNKIF"
     gene            44935..45546
                     /locus_tag="RJ266_000043"
     CDS             44935..45546
                     /locus_tag="RJ266_000043"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HDV7353837.1"
                     /translation="MFNGLIREIAKVQSYQNNTLSLKAKYCPNLGDSIAVNGACLSVT
                     KLYEGGFEVELSRESRTHIVIENLKDKVHIEPALRYGDRIDGHLMQGHIDFIGTLEKI
                     QKDENGVDFYISLPKEAMKFMAEKGSIGVDGVSLTINEILKNGIRLTIIPITFKETLF
                     KDYQVGRKINIESDLLARYIYAQLQGKNKGLSWEEVERISYLY"
     gene            45510..46190
                     /locus_tag="RJ266_000044"
     CDS             45510..46190
                     /locus_tag="RJ266_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase family protein"
                     /protein_id="HDV7353838.1"
                     /translation="MGRSRKNFLSLLENDKVGIFCAFDKDYNVFRAKIHNENLFSHLG
                     FKDIEKCVFMDQIHSHKVIIYDENLKNLSCDGLISKEKNIALCVLSADCLPLILYHES
                     GIIAALHSGRKGSFENILKECVDQITMQNSHLDKNKFHLFILPGICAKNYEIDGEILE
                     FAKKEFKEFVQDDKLDLKALVKFQAQNLGIENIKDCGICSFDDESFFSYRRDKTTKRF
                     VSVVYLKD"
     gene            46192..46395
                     /locus_tag="RJ266_000045"
     CDS             46192..46395
                     /locus_tag="RJ266_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7353839.1"
                     /translation="MYERKDLRVLKIIQKAREFGDGDLLNEALVKQLIDADFCEINEK
                     EKEELATLLHSLINAKDKALLSN"
     gene            complement(46392..47552)
                     /locus_tag="RJ266_000046"
     CDS             complement(46392..47552)
                     /locus_tag="RJ266_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDV7353840.1"
                     /translation="MKKLLLLFIFVVQSFAALSVEELTWDNGDTLLKFLQRNSIPMSL
                     YYGLDREDQELASDIAYKIKYQVLKDENNNIEQVLIPISDDLQIHIYKDKDGQYTLAF
                     TPVSYQKEDRILHLTIKSSAYQDVYEESGSSTLARAMVRAFRGSINFRNIQKGDEVTL
                     YYEQKRRMGKLWGDINIKMAMVEINKSAREVFSYNDIFYDRDGKELESFLLTKPVNYT
                     RISSPFTTARYHPILKRYRAHLGIDYAAPTGTPVKSAGKGVVTFIGTKGGYGNVIQIK
                     HDSGYMTLYAHLSRFAKIKNGQKVNQGQVIAYVGSTGMSTGPHLHFGVYLNNKAINPA
                     SVVKIAKSELSGKAKENFKHIIAGYEQVVKEALASNQPNPPKEEDFENYIEF"
     gene            47674..48399
                     /locus_tag="RJ266_000047"
     CDS             47674..48399
                     /locus_tag="RJ266_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasminogen-binding N-terminal domain-containing
                     protein"
                     /protein_id="HDV7353841.1"
                     /translation="MFKTIVCFLALNLSLFAVGFDLKPIKSELVKVDDIYGYIKDSDD
                     IKLYSSGVVVQHFSNSQSIIARASVIDKKNGLAKLEFSVFSALKQDALPLPNVLPKVG
                     DEVVLNFLYDRGLVIAPDEQTYNELVREFPQIYFTHIDIFGAQLIRTATLSPKRSDFR
                     QFCDDNAVGILVVALENHAEVVDCQDFNKLYEVPISKPTSVQVPFYSRIGGYKSNFFD
                     FNSQEIGNYYRYYDALINLPKVQ"
     gene            48402..49784
                     /locus_tag="RJ266_000048"
     CDS             48402..49784
                     /locus_tag="RJ266_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HDV7353842.1"
                     /translation="MKKEFEQYFKRFLGEENAYFDEIHKRAYSYDATKKHYLPDGVLF
                     PRNEEDIARILKFCNENNIIVIPRGSGSGFTGGALAVNGGVVLAFEKHMNKILEIDLE
                     NLVAVVQPGVINIHLQKEVAKYGLFYPPDPASMEYSSLGGNVSENAGGMRAAKYGITK
                     DYVMALRAVLPSGEIIRAGKRTIKDVAGYNLAGILIASEGSLAVLSELTLKLIPLPKF
                     KKTAFAIFPSVKSAMNAVYKSLASGVSPVSMEFLDNLSIRAVESKFNKGLPIEAGAIL
                     IADVDGNVKEAIDEDLRNLEHYFLEAGASEFKIAKDEQETADIWFARRNCSQSIAMYG
                     TLKLNEDITVPRSKLPTLLEGIDEISKKYGFKIPCFGHTGDGNVHTNVMVPDKNDKEQ
                     VKKGYEAVEEIFKLTVKLGGTLSGEHGIGLSKAPFMNLAFSEAEMNLMRNIKKAFDPN
                     NILNPFKMGL"
     gene            49788..50594
                     /locus_tag="RJ266_000049"
     CDS             49788..50594
                     /locus_tag="RJ266_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HDV7353843.1"
                     /translation="MKNFFTILLNLRDKEILNYAAALSFYTVLSLIPILFVCFSVFTQ
                     ISSFKAYYEKAKQVIFAFLIPTQQDVVATYIDTFLKNSVNLGIVGLIAMAFTSLAFFS
                     GYDFVINRITKNEPKGLWQSISSYWTLLTLVPLGLGLSFYISGFIQQTLDDYKIGFNF
                     FEILPFVIIWGLFFISYSSSVHKGTLKSLALVSFGAGTIWYIGKNLFVYYVVYNKTYA
                     SVYGSFSTILFFFIWIYISWIIYLFGLKLYYFLNHNHNEGNKIRKNTKKS"
     gene            complement(50538..>51687)
                     /locus_tag="RJ266_000050"
     CDS             complement(50538..>51687)
                     /locus_tag="RJ266_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HDV7353844.1"
                     /translation="NFKNQKHYLIDNALLTHQYIKYNKKNKKYWVLKLQTENFTFYTT
                     SFKDLNLSKNQFLSLRIITHNINFKDYLSKSFYAPSYDFEKLKEKEYNPIISYFLNQH
                     TNEKIKEFYGALFFALPISLELRNDVNYYGIAHLIAISGYHIGLLFSLIFFILAPIYS
                     FFQKRYFPYRNLRLDLSILIFALLLAYACLIGFVPSFVRSLIMAFWVFYLLCKNIKII
                     NFVTLFCSILLCISLYPRLLFSIGFLFSILGVFYIFLYMHHFANKFNNLINIILLNIW
                     TFFAMVLPVLYFFPLISYQQILGIILSGIFIIFYPLVLFLHLINYGDLLNFILDEFFK
                     FKIYGTNIHIPFWIFISYLIASLISVRFKYLAFLCIFANFIPFIMIVI"
BASE COUNT        17297 a         7522 c         8295 g        18573 t
ORIGIN      
        1 ggaataatgt ggaaataagt tattatgaaa ttcttgaaat cacgcaaaat gctgataaag
       61 aaaccataaa aaaagcctat agaaaaatgg ctttaaaata tcatcctgat agaaaccaag
      121 gtgataaaga agcagaagat aaattcaagc ttgttaatga agcctatgaa gttttaagca
      181 atgatgaaaa gcgagctatt tatgatagat acggaaaaga tgctttaaaa ggcggtggat
      241 ttggttctag tagctcaggt tttggtggtt ttgaggattt aggagatata ttttctagtt
      301 tttttggaga aggctttggc tcatcgcgtc gtagaaaaag ttcaaatgat gagaaaatcc
      361 cttcagattt tatcgttaat ttaaaattaa gttttaaaga agcggttttt ggttgtaaga
      421 aaaatataga ctttacttat aaatgctctt gtaaaacttg taatggaaca ggggctaaag
      481 atggaaagct tcaaacttgt ccaaagtgtc aaggtagagg acaggttggg gtttctcaag
      541 gttttatcac ttttgcacaa acttgccctg attgtcaagg aattggagaa aaagctagtg
      601 aaaaatgtag tgattgtaaa ggtttgggtt ataatgaaag caaagatagt gtcgagctta
      661 atatcccaga aggtgtagat acaggtatga agcttcgtgt caatgctaaa ggtaatatct
      721 taaaaaatgg tactagaggg gatatgtatg ttaagatcat cgccgctgaa gatgatactt
      781 ttatcagaga tgatgatgat atatatatag aatttccagt gttttttact caagctatct
      841 taggagagag tataaaagta cccaccatac gcggtgaagc gaccttaaat ttaccaaagg
      901 gtgctaaaga tggacaaaga tttgttcttg aaaaagaagg ggtaaaagat gttcatagtt
      961 ctcgcatggg aaatcaaatc gttcaaattt ctatcaaatt cccaacttct ttaaacgatg
     1021 aacaaaaaga acttttagaa aaactaagtg aaagttttgg catcaaagat ggtatgcatc
     1081 aagagcaaaa agggcttttt gaaaaaatca ctaattggtt taagtcttaa ttttcctaaa
     1141 gcgttttagc ttgggaaaat tttttatata aatttaagtt ttaaaaatca ggcataaaaa
     1201 aaggcggagc aaaaccccgc cttgaagtta gacttgaaag cttcttagaa tttgtaaaga
     1261 gcttgaagtc ttacagtgct atgatcagca ctttcattag tgtttacacc ttgatctagg
     1321 ttcacataag aatagaatgc tgagaagtta agttttggag agtatttgta atctactctt
     1381 gcaacagctt caagtttttt accaccacct aaatgattag cagcttctgt ttttgttcca
     1441 ccatatacga agtcagcacc aacgcgaact gtttcgttga aagtatatcc accagttaca
     1501 taaccgaaga tatttctacc agtatcacca tttagtcttg aaccagtagt atagaaaatt
     1561 tcctcacctg caagtaaaga accaagatta ccttgatctt cgattacaac tgtagaagct
     1621 ttttctttat caccgtagta taaaccacca aggctagcat cccaaccatt tacttcaatg
     1681 ctacctttta aagcaaataa attgccatta gcgtgtgttt tatcatcaag ttcgctatca
     1741 aggctatttc ctaagtaagc accttcaagt gtccagttga ttccatcaaa gatagttgta
     1801 ctataagctg catctacagc atagaagaat gctacttgat cccaataagc taaccataat
     1861 tgtgggttga attgtccacc agcaagatca taagaaccta cagcagcagc accgtaaaga
     1921 tttccgattg aatctaattt aaatgaatca ttattatttg tactgttgcc aacataagta
     1981 ctttgtccta ataaatctga accttgttct gcagccatga agctatctac agcaaaagca
     2041 gctagagtta aaccatcaat gctgttgttt actactttaa cacctgttcc aactaaacca
     2101 tcaactccat tgtcagtcca gataatgttt agttgttgtt taccagcgat tacgcttgta
     2161 gcaacatctt catttgtata agttaagtat aattgacgaa caaaaagtcc tttttcagca
     2221 tttgttgcgt tatcaacacc agtaccacca tcaacagcgt tgtagtcgaa ctgaatgaaa
     2281 gctttgaagt tatcagctat agcagcactg aagttaactt gtgctctata tttgtgaact
     2341 tgtttgctgt tatttaaatt tgagttgtta aggaaatttt tatcaaaatt acctgtatcg
     2401 tatctgtatc ttaatacacc tgatacatca atatctttga tcgcttcttc aagtggagta
     2461 gcgttagctg ctgaaaaagc acctgcagca agagctgcaa ctaaactaag tttaactagt
     2521 ttcatgagaa ttctccttgt caaaaattaa taaaacatcg taattgtagc acataaattt
     2581 ggagtttttt cttaagaagc acttaaaata gtaaaaattt taaatccgaa ggataaaaac
     2641 atctaaagaa aagcctagct aaagggattt aagctaggcg tgtaatttta aggagttttt
     2701 cttatgaatg tttttcggtt cgtttagaag tataagccta aaaagtaaac gagaagtaat
     2761 atatagttgt tttaaattat tttgataaaa aaacaagtaa atttttacaa gctagggata
     2821 aaattttata agtttcatca aaattcccac tataccaagg atcagggact tcatcgtagt
     2881 ttagactagg gctaaaatca gtgattttta aaactttgtt ttgggtgttg gtgaagtttt
     2941 ttaaaacatt tttgaagtta gaattgtcca tggtgattaa aaaatcgctt tcatcgcaaa
     3001 gcttttgagt gagttttttg cttgtgaagt ttttgtgttc tatgttaagt tgggcaagct
     3061 tgtttttggt gccatagtgc atactttctc catcatgttc tcctgaagtt ccagcactgc
     3121 ttataaaaaa ttctttttct aaatttgctt ttttgacaag atctttcatg ataaattctg
     3181 ccataggtga acggcatata ttgcctaagc atataaagag tatttttttc atttttatcc
     3241 ttgagtttta attaaaaatt ataaaaaata tcatacaata aatccatgga aaatttcaat
     3301 agaactttgc ttgtgtgttg gtttggtgtt tttaccacaa gtatggggct tagtcaaatc
     3361 gctccgattt tgccttttta tatcaaagaa ctaggacatg ttgatacgag tgagatagca
     3421 ttttattcag gacttgcttt tgggatcact ccgcttttta tggctgtttt ttcacctttg
     3481 tgggcttttt tgggtgcaaa gtatggttat aaaaatatgc ttcttcgtgc aagttttggg
     3541 atgtcggttt taactttatg gcttagcttt gctcatagtg ctttagaagt ggtttttgtg
     3601 cggggtttaa cagggataat ttcgggtttt acttctgctg ctgttgtgtt tatcgctgtg
     3661 atagcaccta aagaaaaagt cgcttatgct ttaggaactc tttctacggc ttctataagt
     3721 ggaagtttgc ttgggccttt gtttggtggc tttgtggctg aattttttag tattagtacg
     3781 gtttttgata tggtggcttt tttgatcgct tgttcttttg tgacgattta ttttttcatc
     3841 catgagagaa aaattcaaaa agaggcgaag aaaaatactc aaaaagtgaa agaaaacaaa
     3901 acccttatta tcgttctttt tatcactact tttgtgatac aatttggtac ttttggagtg
     3961 atgccgattt taagtatcta tgttgagcaa attcatcaag gtggaaattt ggctctttgg
     4021 gcgggtatag tagtggctgc aagtgggatt agcaatcttt ttttcgcacc aaaacttgga
     4081 aaaatcgccg ataagatagg gcctagtaag attatttttg gagctttgat attttgtgga
     4141 atttgctttt atttgcaggc tgtagtaagt aatgtttata cacttatttt catgcgttta
     4201 cttataggtg taggacttgg agggcttttg ccttgtgtga atgccttgct taaaaaaagt
     4261 gtgagtgcta aaaatttaag tgtgattttt ggttttaatc aaacttgtca atttttggga
     4321 aatttttgtg gagcttttgg cggagggctt atggcttcac attttagtgt ggaatttgtt
     4381 tttacttttg tgtgtttgat ttttatcatt aatgctttta ttttcttagc gtttgagaaa
     4441 aaatatatct tttcaaatca aggtttataa atttagaaag gtttaaaatg gaaatgattt
     4501 tatttgtttt agtgatgatt ttacttgtac ttttgtttgt agtgcttttt aggcagtata
     4561 aaagccctaa aatagaagaa aaaagcacgc aaagttttag cgatatcatg cagcttaaat
     4621 ccataggaga attaagtgtt tttcaagttt ttagtaaaga gattgtcact aaaaaagata
     4681 gcgcttttaa tggaatttgg aaaaatcttt taggatggtc tttgagtgaa agacagattg
     4741 ctttgatttt tgaatttgag atcactttct tgtatgattt aagggataaa aactttgata
     4801 ttttgccttt aggggacgat gcttataaga tcatcatgcc agagtgtaga tacaaacaca
     4861 gcatcataga tatgaaattt tatgatgaaa aaaatgctaa atttttacct tttttactgc
     4921 ctgattctat caatagtacg gggattagtt ttagcgaaag tgataaaaac aaactcataa
     4981 aagaagccaa agatgaggtt aaagacttgt ctttaaatct tatccaaaat ttagaaagca
     5041 aaattcataa aagtgctaag gatactttag aagctattgc taaaggtttt ggagctaaga
     5101 gagtggaatt tgaattcaag gataacacgc aaaagctaga tattaactag cttttttctt
     5161 gttttacttg ggggtaatgc ttagtttgtt attttgtaaa ttttttgatt atttcatagt
     5221 tttgtaaaag ctgttcaaaa gaaaaattta aatttgcagg agaagttgag ggtagggcta
     5281 tggcttttaa gcgagggtgg aatttaataa aaaatttata agcactttgt ccagtagtaa
     5341 aaatggcttg gattttggtt tgagaaagga tcgggcttaa atcattggct tttgcataac
     5401 ttatagtttt atcatctgaa ttttttatct tgcaactttg aagtacatcc caaagagcga
     5461 tatgtttttt tcttaaaaag gcttgttgtt ctgtgatatt ttctaatctt acatcaaaaa
     5521 gtgtttctag tataggccaa aaacgatttc ttgggtgttg ataataaaag ccatcttgtc
     5581 ttgattttac cgaaggaaaa gatcctaaaa ttaagatttt agaatctttg tcaaaaaaag
     5641 gctcaaaagg atgagttaga aattcactca ctcacacaaa tccacagaaa tttttccgtt
     5701 tttaatttcg ctgattttaa cttttaagct ttggttttcg cttaaattaa gatgcttgct
     5761 ttttgaacta tgcaataaac catcaacacc atttttaagt tccacaaagg ctccaaaagg
     5821 agcgattttt ttaacaatac cttgaaattc ttgcccaagt tcaaagcctg atatatcttt
     5881 gtctttagag ccttttttag ttcctttttg agagcttgtg atgtttatga tgtagtcttt
     5941 tgcggctttg atttgttcgt tttgactacc tgctattttt acttcacctt tttcgcgatc
     6001 taagtctata gaaacgccaa atttttctac gatttctttg atggtttttc cggcttgtcc
     6061 tatgatatca acgatttttg aaggatcaac gctaaaaagc tcaagtttag gtaaaacttc
     6121 ttcattgact atgatttctt tggcggcttc ttccatgata tttagaatgt gaattcttcc
     6181 ttctttggct tggtataaag cttgttttag tatttcttga tcgattccac ctagttttat
     6241 atccatttga agagccgtaa tgccgtcttt gcttcctgct actttaaagt ccatatcccc
     6301 atcatgatct tcaagtccca tgatatctgt taaaacagca tacttgttat cttcaaagat
     6361 aagccccatg gctactcctg caacaagttt taagcttggc actcctgctg cttttaaggc
     6421 taaagatccg ccgcaaaccg ttgccataga acttgagcca ttgctttcta aaatttcact
     6481 gactaagcgg attacataag gatagttttc atccacactt ggataaagtg ctcttttggc
     6541 taaatttcca tgtcctagtt ctcttcttcc tggagctttg ataggacttg cttcgcctac
     6601 tgaaaaacct ggaaaattat aatttaccat aaagcgttcg cttataggat ttttttctgt
     6661 aagcaagtct atcatttgag catcgttttc tccgcctaag gttgcaacca ctagggcttg
     6721 agtttgtcca cgagtgaaaa gacaagaacc atgagcgttt ggtaagatgt tggtttctat
     6781 attaatagga cgcacttcgt ttaaacttct accatcagct cttttgcctt catttaaaat
     6841 ttgctcacga ataagtttgc gtttgacttt agctaaggta tttaagacac tttcttcgct
     6901 ccactcttta gcgatttcaa gatttgaaat ttctttagcg attttattta gttcgcttgc
     6961 tctttcgctt tttgccattt ggttgatggc ttctttgatt tgtttttgga aattattttc
     7021 tataaaagct aaaatttcag gatattcaat ctcatttttt agttcgattt gagaattttt
     7081 ttcgtgtttg ctaaaggctt cttcataagc atttgaacca tttaatatag ctttttgagc
     7141 taaatttaga gcttctaaaa tttcatcttc gctaagttca ttcatatttt gtgaagtggt
     7201 ttgagttaaa acatcagcat aaggagcttc gataaagatt tcattttctt tttgatcagg
     7261 taaggctctc atttctatca tcaaaagctc atcttttaca cctgctacat agagatctag
     7321 ggtgctattt tgaagctctt cattgtttgg attgagtatg aaatttccat ctatctttcc
     7381 tatacgcaca ccacatactg gagctttcat aggtatatca ctaagataaa gtgccacgct
     7441 tgcggcattt aagctcatta cttgcaaatc tactttagga tcagctgaga gaaccatcac
     7501 aacgatttga gtcggataag catagccttt tggaaaaaga gggcgtaagc ttctatcaat
     7561 aatgcgtgct gttaaggttt ctgcatcgct tggcttggtt tctcttttga cataaccacc
     7621 agggattttt cctgcggcat aagctttttc gatgtattgg acggttagag gtaaaaaatc
     7681 ttcttcaact tgtttttctt ctcttgcaac tgtagctaga acaacgcttt tgccttgtct
     7741 cattaaaaca gcaccggcag cttgtttggc gactttgtct atattaaata tttctgtatt
     7801 tttgttaatt tctatgctgt attgcattat ttttcctttt ttaccagata ataaattcgt
     7861 aaaatttttt aaaatattta gcaaatttca tcctttttaa attttgtttt cactttctgc
     7921 taaagagaaa tcgtatttta ctcctcctaa aggatagaag ttgaaaataa aataaactcc
     7981 gctttgattt ttagctgtga taccaccact tgtgagttgt ggatcgattc tttctctata
     8041 cattaaagaa tagttccaac attttctttg gtaggtatag ccaagttccc acatgtttgc
     8101 atgagctctt tgagtatcaa accaaattcc accaaataaa ttgtaattag gtgtggcaat
     8161 ataatttgct cttgtaccaa taaagctata ttttccatac tcatcgtttt gataagcatg
     8221 agaaaacatc caattaaatt ttgaatttgt attgacttct atttggctga tgacattggt
     8281 aaagcgactt tgttcataag agtaaagcac ttcgctgttg agattgatgt tttcattaaa
     8341 ataataagtt aaaagatttt caagttcata gaattcattt tgtttattga gatagtcaag
     8401 cgaaattctg tgtttgagtt ttttttgtcc ttcgttgtta tagaaatatt gcacagtata
     8461 aagacttgta tgctcgtttt ctttgtcgta ttcttcaaga taatcttgcg tgattttacc
     8521 tgattttgct cctggcaaaa cgtaattcac ccctaaattt aaagtatgaa agaaattttc
     8581 ataagctttt gaaagatcgg tgtagagatt aaaatcatga gtgtttctga aataatgctc
     8641 atggtttctt tcgggattgt tgctataatt tacaaaagaa gcataaaatc tttctgtaaa
     8701 agtaaagtgt aaaaagtctc caaaaaaagc gttgtgatac gagataggca agtctaaatt
     8761 tagctcattt gcataagaac cagcaggtcg gtaaaaatta tgaaatgaag catcaaatga
     8821 ataacgcaag cgttcatcaa aaaggttatt taaaaatcta tgatattgaa agcttggata
     8881 ttcttgtaag gttgtattgt tgctaagttt agatgtgtcg atataatatc ttgcataagc
     8941 tccgtaaaaa ttgttttcat cagctaaaaa ataattgatt ttggaggtta caagcgagtt
     9001 aagatctcga taatccctac ttcctaaatt taaataatcc acatcgttga gataggttgc
     9061 atctatccat agaccttctt gaaaattatc actgagtaaa gatttgatta aatcatctct
     9121 tgagtatttt agttctattc catagtgggt ttgatttttc aaattttcat cgtgaaaata
     9181 ggagctattt tccctaaaag caccaaaatt taattctcct gttgaatatg gagaatcaag
     9241 aaatcttaaa gtagaataaa gtccaaaacc acggtttgtt cgaatttgtg gatcaagttc
     9301 taaatcccaa ttttcttgag tggctatata aataggttgt tcatagtata agccttcgct
     9361 actttttaaa acgatttttg ggattaaaag cccgctttgt ctatgagtat cagcgctaaa
     9421 tccaaaataa ggtagataaa aaactggggt atttttaaca tataatcttg cattgtaaag
     9481 atgaacaaaa ttggtttccc ggttaagcca gccttttgaa aaacgaattt cccaatcagg
     9541 atcttcaaca ttgcagcttg aaactgctga aactttgctt tcaaagactt tatcatttag
     9601 atggcttgtt ttgctttgaa accatacttc aagattgtta ttggaaaaga aaaaattact
     9661 aaaatcggct tgattggaat ttaggttgat tttagcataa tcagaatgtg atctttcgtt
     9721 ttgtcccctt aggatattaa catcgccaaa aagctcaaca tctccggttt tttcattgta
     9781 aattgcttta ttggcagtga tgaaataaaa atcagaaaaa ataataacat cattgttcgc
     9841 agtaagaata tcaccttctt tttttgcatc aagagcgtaa atatcaactt gtgctgcatt
     9901 taaagctatg ctagttccta gcaataggga aaatttacgc cacatcgact actattgtcc
     9961 ttgctagata atcctcccaa gctttgcgta aatcattgct taaagcccaa gcaaatccaa
    10021 gcataaacgc catagcacta acttgtctta cggcagacct gatgcaactt tgaatgagat
    10081 tgggtttatc aagaagattt tcatccaaga tgataatttt gcataatatt tttcccaaac
    10141 ttgccccata aagataagta aaaattgctt gataactaaa atgaagcaag atgaagccaa
    10201 ggtaaaaatt tcctacaatt tgagttgttt caaataaatc ttttgcttgg attagacgat
    10261 cataaaaaat gataaacaca atcaaagaaa taaccatatc atcgattaaa aaagctagaa
    10321 ctctttttcc aaaacttgct atttttagat tttcacgctc taagcggtct tgtaaatttt
    10381 ctttcatttc agaacctgat gagcgatgtc ttttctgtat tgttttcctt tgaaatttac
    10441 attatcacaa agtttataag catttttttg cgcttcttct atactttttc ctgtgccaac
    10501 gcaaactaaa actcttccac catcagccat taatttgcca tcttctaggc ttactccagc
    10561 ataagaaata tgagagtttt caggaatgtt atttacggta atttcacttt ttggtgaact
    10621 tttgtaagga tagttttcac tcgcgcatac aacccctact gcaaattctt ttttgatttt
    10681 gatttttgag tgtcttaagc gtctttgagt agcagctaaa ataagctcta aaggatcttc
    10741 gattaaaggc attaaaactt cacattcagg atcgccaaag cgaacgttaa attctaatac
    10801 gtaaggttta tttccaacga tcatagcacc tataaataaa acaccacaaa attccgctcc
    10861 ttcttttttc atacctgcta aagttggtaa aataatatct ttttgaactt ttctaagcaa
    10921 gctttcattc gccaaagagc taggagcgta agcacccatt ccaccagtat ttggcccttg
    10981 atcattatcg agtaattttt tgtgatcttg tgctgcagga agtaaaacaa aatcattgcc
    11041 atcacatact gcaaaaatgc ttaattcata accatctaaa aattcttcaa ttacaacgag
    11101 ttttccagca tctccaaagc tttctccgct cagcatttta gctgtttctt ctatggcttc
    11161 ttcatgagtt ttagctatga taacaccttt tcctgcgcaa agtccatcgg cttttactac
    11221 tataggaggg gttaaactat atataaaatt ttttgctttt tcaatgtcat ttgtgtttaa
    11281 aaatttggct gttttgatac ggtatttttt aagaaagctt ttcataaaag attttgaggt
    11341 ttcaagcatt gcagcagctt tacttggccc aaaaatagca agtccttgtt gtttaaaaat
    11401 atctacaacc ccttcagcta aaaaactttc acttcctact atacaaagat caaaaccttt
    11461 ttcttttgca taggttgcta aaactactgg atcttttagg tttaaatttg ttccaagact
    11521 ttcggtagcg ccatttccag gagcaaaata aaactctaaa tttttgtcta ctcttcttaa
    11581 ggctaaagca atagaatatt ctcttgcacc actacccaaa atcattattt tcatttatat
    11641 ctccttttaa acccaaacag ccgtttaaca aagattgacc ccaaaaagtc aaagaaaacc
    11701 gctaggtaat ttttaaaggc tgcaacttct cacttttttc aaagctcaaa cgatgccaca
    11761 gaacacggta aatcacacaa tcgcagttaa taaaaatgtg ttggatcact ttaaatacta
    11821 caaactgttt aggcaaggaa attataactt aatttagctt aaatttctat gtcttaaatc
    11881 agtttaaatt tggtttttcc tgatttgtca aaatgctttc cttgtaaaat aatatcggca
    11941 acattttccc aaacatgttt ttcatcaata tagactatat caaaggtgtt atcacgcatt
    12001 aaagattgat aatttacttt tttaggtgcg tattttacta aataatacgg attttgtgaa
    12061 aagttttcaa tttttaattt gcataataaa tctaaatccg atgtgacaac taaaaatttt
    12121 tttctttgtt cttttgtgat tttttgaata tacactaaaa gtttttgatc aaaaggattt
    12181 agagcggatt tatttaagcg acttaagtaa tgttctgcaa aagaaagaga acagaaagaa
    12241 ttttctatat tactcatagt aaaataagaa tttttaaccc ctgatgattt taaagataag
    12301 tgccaaattt tgacatccat tatggttgca catagattta aacctgtgac aattttttta
    12361 aagagttttt ctcgtgaaag tttaaaagca ttttcgaaaa tattgtaatt tttcttataa
    12421 aaatcttccc ttatagcatc aagtcttttt agtgttgttc tgtagtattc tgcttctttt
    12481 tgtagtttag ccaatctttc ttgtcgtgct ttaagttttt cagggtctgc atcggtcgca
    12541 ttgcttttaa gatttatttc agattgtaaa gttttcattt gtgcttcaag tgaggctaga
    12601 cgattttttc ttgtatctat ggtggctact aaagcttggt aatgacactg caaagataaa
    12661 aaagtttcgt taaaaatttt agtgatattt ggtttttgat cagctatcat ttgcttatac
    12721 gaattctcta aatgcatcat gatgcttttt aatgcgctaa attgggtttg gtctatgcta
    12781 ttatccataa aaattaaagt atcataagct ttaaataaaa atcttttaag tataagataa
    12841 tcaagtatac aaggaatttc cttttcatct tgtagattgg cttgaagcgt ttctacggat
    12901 aaaatttcat gggcaaaata tttttgtata gcttgaggta tagtaaaaga aagaggaatt
    12961 ttttctatag tgtcaaagtc tgttgttcta tagagttctg ttatataagc acttcttctt
    13021 gagttttgca agtcttctaa ttcatcatca ttatcagttt tccaaaaatc atgctcagtg
    13081 ataaaatccc cttctttgaa ttcttgaaat tttgaaggtt ttatacctgt tatggttttg
    13141 cttgtttgaa cgagtttgcc gtcttctgct tttttttcgc tagaaagagt tctaaattcc
    13201 acaagcatac caacacttgg catacttttt ttatcattcc aaatttggcg attaaagtca
    13261 aaaaaggtat ttgctgagtt tgtaacggtt ccacgtcctg tagaatccat ataaatagct
    13321 atttttccat gcatatttct tccttgaaat ttcttaaata aattctagcc ttatttttat
    13381 aaaaatttta tattaaaaat aagagctaga aaaaatggat tattcccatt ctatagttgc
    13441 aggtggtttg cttgagatat cataaacaac gcgatttata ccttctactt cattgatgat
    13501 acggcgactt atgttttcta aaatttcgta aggtaaatgc gagaaggtag ctgtcatacc
    13561 atcacttgca tctacaacgc gtatacaaac tgcattatca taagtgcggt tatcccccat
    13621 aactccaacg cttttaacat ttaaaagtac gcaaaatgct tgccaagttt tatcatacca
    13681 acctgtactt ttaagttcct caagtaaaat tacatcagcc ttgcgtaata gttctaagct
    13741 agcgcgattt acttctccca taatgcgtat agcaagacct ggcccaggga aaggatgacg
    13801 ataaactact tctttgctaa gtccaagctc aagtcctaag gcacgcactt catctttaaa
    13861 aatttctttt aaaggctcta tgagtttaag attcattttt tcaggtaagc cccctacatt
    13921 atgatggctt ttaatggttt tgcttgaacc tacaacagaa ctttctatga tatcagtata
    13981 aagtgtgcct tgagcaagat attttacatc tttatgtttt tttgcttctt cttcaaaaac
    14041 ttctataaag gtatttccta tgatttttct tttttgttca ggatctgtga cattagctaa
    14101 gcgacttaag aaaatttcac ttgcatcaat gctgatgaga tcgatgccta aagtgttttt
    14161 aaacataaat tcaacttgtt ctttttctcc acttcttaaa agtccattat ctacaaaaac
    14221 tactataact tgctctttta tagcactagc taaaagtgca gcaactacgc tactatctac
    14281 tccgccactt acagcacaaa gcactttatc attgcctact tcttcacgga ttttttctgc
    14341 ttgagttttt gcaaaagaac ccatattcca aatactttca caattgcaag catatttagc
    14401 aaaatttttt aagatatttt tgccaaattc gctgtgttgt acttctgggt gaaattgtag
    14461 agcaaagaat ttcttatctt cgtttccaaa aacacaaaaa gggctatttt cacttgtggc
    14521 taaaacttca aaaccttgag gtaaattttc tactttatca gaatgactca tccaaacggt
    14581 ttgttttttt ggaagatttt taaacaaagc gttatctttt ttaatttcta tgtttgcttt
    14641 gccgtattct ttatgtcctg caggtgctac tgtagctttg taatgatgtg ccataagctg
    14701 cataccataa caaattccaa gaacaggtag atttaagtca aatatacctt tatcgcaaaa
    14761 atacgcatca gttgcatata cacttgctgg acctccgctt aaaataatac cttttggttc
    14821 tttcgcctta atatcagcta agcttacatt aaaaggtaaa atttctgcat aaactccttg
    14881 ttcccttaag cgtcttgcta taagctgagt gtattgagag ccaaagtcta aaactaaaat
    14941 atctgctttt ttcattattt accacctatg taattgttcg tattttttaa tggtttttac
    15001 tgaaccattt tgttcatagc ttgtgtattg agggttgcct ttatatccgc aagcacagaa
    15061 gaaaattaag aaaagaaatg ctaaaatcat cttatgggaa aaagaaataa tattaagatg
    15121 actaaaaatg ctagtgctgt tattaatgaa ttgatggata aacctcatta taagccttta
    15181 aaaaccttat ttttttgcaa agatttttta agttcttttc cgcttgctaa gcaacgtttg
    15241 attgctaaaa tttatgtaaa aaatcatatt ttaaatataa taaccttaca tccagcagct
    15301 tatcaagaat taaatcatga tgatagcaaa atttatatta aatttctcat aaaagcatat
    15361 ggacagaaat atcctttaag tggatttgtt gatataaaag atataaaaat cttttctcaa
    15421 aaatacactt atgcggcaaa taaaaacaaa aatgatgaaa aactctctaa aaattcttat
    15481 ttggaacttt ctaagggtga atttaaaaat tgctttgaag atgaaaaatt atttaagaaa
    15541 tttgaagatt taagagagct tataaaaaaa ggttctaatc ttgattaaag agaatttaga
    15601 aaatgagtta aaaactcttc ctaatagtac tggcgtttat caatacttca atcaagaagg
    15661 aaagctttta tatgtaggca aggctaaaaa tcttaaaaat cgtgttagat cttattttgc
    15721 ttttactcca aatttacatg caaatccaag aaattcttta agaattcaaa aaatgattga
    15781 agaaacagtg catttggaat ttattgctac taattcagag gctgatgctt tgattttaga
    15841 aaattctttt atcaaacaac tgcatccaaa atataatatt ttgctaagag atgataaaac
    15901 ttatccttat atttatgtgg attttgaaga agaatttcca cgctttgaga tcactagaaa
    15961 attagtaaaa aaaagcaaaa ttaaatattt tggccctttt tttaaaggcg ctagagagct
    16021 tttagatgcg ctttatttat actatccttt aaagcaaaaa gcaagttgta aatccccttg
    16081 tattttttat caaatttctc gttgtcttgc gccttgtgat aaactcatca gcaaagaaaa
    16141 ataccttgaa attttagatg aggctatgca tgcactttta aatcctagtg ttttgcttaa
    16201 aaacttagaa aaacaaatgc ttgttttagc acaaaatgaa aattacgaag aagcagctaa
    16261 agtaagagat cagattgcaa tgattaaaga tttggaagtt aaggttgaaa tagatattgc
    16321 aaaattagaa gattttgaag tatttgcttt agcttttgaa aattccatgc tttcaacctt
    16381 gcgttttgtg gtgcaaaatg gaaaaattat cagtgcaaat tctaagatta cttctataaa
    16441 aaatgatata caatgggatc aaaatgaaat ttataagcaa ctgattttag aaaattttag
    16501 catggatatt cctttgcttg caaatgttat ttatgtttat gaagaatttg aagatagagt
    16561 gcttttagaa gaaattttaa accaaaggtt tgataaaaaa atcagtatta aaatccctaa
    16621 aataggagaa aaaagaagaa tttgtgattt ggcttttcaa aatgcccttt taaatataga
    16681 aaaagagcaa aaaaatcatg attttactat acaaaaagaa ttaaagtttt attttgagct
    16741 tgaaaattta ccaaatgata tagaaatttt tgacaattct catttgcaag gcgtggcaaa
    16801 tgttggagct atggtaactt atagaataaa ttcttgggat aagtcaaaat atagaaaatt
    16861 tcatttaaaa cataaaaatg actatgatca aatgcgtgaa gttttaacgc gtagggcttt
    16921 ggactttgat aaaatacctc ctcctgattt atggcttata gatgggggaa aggctttgct
    16981 tgatttggct aaagaaatca ttgtaagtag tggggcaaat gtcgatattt tagctatttc
    17041 aaaagaaaaa atcgatgcaa aagcacatag agctaaaggg ggtgctaagg ataaaattca
    17101 ttccttaaaa ggagaattta gtctaagcat taacgataaa aaactacaat tcttacagaa
    17161 attaagagat gaagcacacc gttttgctat cagctttcat caaaatacta agaaaaaaca
    17221 ggacttgaaa agttctaagc ttgcaaattt aggacttagt tcaggggtta tacaaaaact
    17281 tttagcgtat tatggaaatt ttgaatctat atataaggct gattttaaag atcttacaat
    17341 gcttgtaggc aggaaagcgg cgcaaaagat aaaggaaaat tgatttgata ttagcaggga
    17401 taatttttat ttttaatcta attttagcgt atttaagtat tgatatctca aagcttgata
    17461 gtgttactga acaactgaaa ataggtatgt tttctagcat ttttgtttta tctttaacac
    17521 tttttatttt tgcttttagg caaaatagaa atataaacaa aatatatcaa aaaatttttt
    17581 gcatgcaaaa tgatttttta aattttcaaa aaaagattga tgttgatagt gcgcttgatt
    17641 tgttaaagga aaaatttgaa actacgggtc aaaatttaac taaaatatcc catgaaaaag
    17701 atagatattt gcatttattg gaggaaaatt tatatcagct tggaaatata tccaatgcaa
    17761 tgcgttgctt aaatgaaggg tataataaag aaattaattc tttgatttta aatgccttaa
    17821 attctcaaaa agatcaaatt agattagaat taaatgaggc tttagagcat cttaaaagca
    17881 ttatagggac atctcatgga aaggttttgc aatttgaagc aagtgtggct atagttaata
    17941 atgatgagct tgagaatttt ttacttgcaa atttactttc gtattttggc atagaaagca
    18001 cttgttttaa aaatttaagt tttgatgtta atgactttca tttgattttt atcaaggata
    18061 aaattttaaa tgaaaatgta aagaaaaact atgattttat agtgatgggt cgccataaaa
    18121 atacacatta tgagtatttt ttaactttac cttttgaaaa aaaagatctt gaaaatattt
    18181 tgcaaaacaa gcttgataag gtttgcactt taaaatttaa aaccccttat caaaataatg
    18241 tattgctttt taaacaaaat gattttgatg caaccttatt ttttaatata atagaaaaac
    18301 aatgcgataa aaatatatgt ataaattctt ttagtcaatt aaaacaagaa ttaagtaaag
    18361 agacttatcg tttgatttta cttgattatg aattaattaa atttgatctt gagcaaatga
    18421 gaaatttgct aagtgcttat aaaaaacagc atccacaaag ccatattatc tttttttcaa
    18481 aggaaaaaat tagggatttt gattgtgtga gtgaagtttt aagtgatgta agtagaaatg
    18541 atcttataac tttacttaga aagtatttgc caaaggccta aactttataa aatttaactc
    18601 cagctaaatc gagaattttt accttttttt ctttgataag ttgatttaag agagttttgg
    18661 attgttcatc aaattttact tcaatgtcta tttcgctttg tgagcgtaga tgaagcattt
    18721 ttaataattc ttcttcattg aagcttagtt tttcaccttc ataatgtctt ttggctaaga
    18781 gtacgggagt agaatctata agtttagaaa gttctaaaag tttttcttcg cttacttttt
    18841 taacggcata agcaggaggt ctatctatgg tacttagatc aacccttaaa ggcatgattt
    18901 tttttaaagc ttgattgagt gctttaaatt cttcttcatt gtcgttaaga tctttaacaa
    18961 ctagaatttc cataatcaaa tctccattaa acctagctct aaaatctgcc attttttcta
    19021 tcattttttc taagtcaatg ttttttaaag ctctatcaat acgataaaaa gttttagcaa
    19081 ctgcactatc taggctaaat ttgaccacat ctagttttag taaagcatta aatttgtctc
    19141 catctaatac agctgtacca ttgcttaaaa taagcaattt tttatcttta gcaatgctgc
    19201 gtaaagataa aataagctca tttaaatgag gataaagact aggctctccg ttggcagtaa
    19261 gggtaagaaa atcaaattca acattttttt caagcacaac tttaacttcg gagataattt
    19321 tatctatgct gataatttca tcttgttttt cttgggcttt ttttggatta agctcacaat
    19381 aaacacaatc aaaattgcat tgttttttgc tagggcttaa atctataccc aaagatcttc
    19441 caaaacgcct tgagctaaca ggaccaaaga gtattttcat ttagctgaac tttcttgtac
    19501 aagcttgata aaatattttg cattttcaac aggaatatca ggcaagatcc catgtcctaa
    19561 gttgaaaata tgagctttat tttgcatggt ttttagtatt ttttccactc cttctttgat
    19621 ggcattttta tcataaagtc tacaaggctc catgttgcct tgaagagtgt atttgtgtga
    19681 tagtttatca cgtgctaaat caagcggagt gctccaatca accccaaaaa catcaaaatt
    19741 accatcgatt ctatccaaat aaccgctaat gcctttaggg aataaaatta caggtatatt
    19801 tgggtatttg cctttaataa aatttgaaat ttcaagcata taattaaaag agaattcaaa
    19861 aaacttatcg tattctaaag cacttgccca gctatcaaaa atttgtatag cattagcacc
    19921 tgctttaatt tgctcttcta aataaagttt taaaacttga gttagtttgt ttagaatttt
    19981 atgtaaaagt tctgggtttt gataaagcat ttttttacac tttgcataat ttttacttcc
    20041 acttccttct atcatatagg tagctatagt ccaagggctt ccgcaaaatc ctattaaagc
    20101 cttgttttga gataattttt ctctagtaag ctttaaggta tcatagacat aatttaattt
    20161 tttatgtgca ttttgatcgt caagtttttc taagtcttct agggttgaaa taggattatc
    20221 aaaaacaggc ccttctcctt tttcaaaacg taaattcata cccatttcaa gaggaacaac
    20281 taagatatct gaaaaaatga ttgctgcatc tacatctaaa atatcaatag gctgtaaaga
    20341 aacttcagaa gcttttttat agtctttgca taaagagaga aaatcacccg cttgttttct
    20401 tacttccata tattctggca aatatcttcc tgcttgacgc atcatccaaa taggggtgta
    20461 aggtgtaggt tttttaaagc aagcatcaat aaaaatcatt attttccttt gtttttagca
    20521 aaattataac agaatttgat aaattaaatt ggtcaatttt tctatatttt cttcatatgg
    20581 aggaaataat aaattttttc attttatcca gagttatgag aaattttacg agaattattg
    20641 gaattctcgt ttgtgtagtt tgagttttga tttgtatatt aagcctttgt attgtttgtg
    20701 gcatttcctg cgtcaattgt agcaaaaagc ttatttagca aagtctcctc attttttttg
    20761 tattgatctt ctctcatttt ttgccaagca taagatctaa aatcttctct agcagcacta
    20821 agatcaatat cttcgttagt aaatttgctt gagcttgttt tttcttcttc cttttcttct
    20881 ttgtttttta cttcatttaa tgtggcttga aattcatctg ctgaagtatt tttctcttta
    20941 acctttgttg tggtgctaaa aatagcattt gatgtttttt gagtattatc tactaccatt
    21001 ttctcctcct ttatttaact ttacattaaa caaacaagca atttctattc caatttatat
    21061 ctttttaaaa ctttttcttt gaaatttttt ataatttaat ttatctttgg caaaaagtaa
    21121 ggcaaaaatc aaagcagggc ttacaaaaag tgccgaaaat aaagcattaa attctatacc
    21181 caatcctgct aaaacaatcc cacctaaaaa acttgctaaa gctatgccta cattaaaagc
    21241 tgcttcattc acacttattg tgctgtctat gactttataa gtgtggcgtt tagctttagt
    21301 aatgctaagc atttttagcg caggtatggt tgaaaaggca aaaaatccta tcaaagctac
    21361 gctaaaaatg attaaaattt tagaatgcat ggtgagaaat acgcttaaaa atactagaac
    21421 ttgtatgctt aaaataagac gcaaagaaaa aatagcacct tttttatcta ctatttttcc
    21481 gccccataaa ttcccacaaa ttgcgcaaat tccatataag agcaagatat aagctgtatc
    21541 ttggacttta aaaccgctta tttctacaag taatttttgt aaataagtat aaagaacaaa
    21601 ttgagcccca caactacaaa tggttatagt ataagttttt aacaaatttt gatgcgaaaa
    21661 agcagggatt aaatttttaa gacttgttgg gctaggatgt aaatttttgg gcatcatatg
    21721 ccatactcca aaaaatgcta agcttgtaat gataaaaata agtaaaaaga taaatttaaa
    21781 gccaaaataa tgtcctatga aagttccaag cggtactcca gtaactaagg ctacagtaag
    21841 tcctgtgacc attatagcta gagcgcttga ttttttatca tctggggtta tagcacttac
    21901 agctaaggta gcaatgacaa aaaatacccc atgttgtgtt cctgctataa aacgcgcaaa
    21961 tgctgtaaga tagaaatttt ggctaaaaaa gataatgaaa tttgctaaag caaaaattcc
    22021 aagattactt aaaagttgta tgtgtctatg aaaacgactt aaaggtatag taataagagg
    22081 agcgcctata acaacaccta tggcatataa ggttgtaaga tagcccgcgg tttttgcatc
    22141 tacgctaaaa tacgcttcaa catcaaccaa aactcctgcc ataacaaatt cggttacgcc
    22201 catacaaaaa gcactaagag ctagtgcaaa aagagctttt ttgtaatttt gcattttaag
    22261 ttccttataa aaaataaaaa cgcattataa taaaataaag gcttaatttc cttaaaaaat
    22321 tcaaaatatt tttgttaaaa taaaataaaa attttaaagg taaataatga aaaaaattat
    22381 tttattgctt ggtttaagtt tggcgagttt aggggctttg agttttgatg agcttattta
    22441 taaagatgaa gtaaaaccta gttttgattg ctctaaaatc aaatatgatg gcaaaagtga
    22501 tgatgagctt atgatatgca ataaaattgg tgtgcgtaat gaatttaaga ataaaaaact
    22561 tgctttagta gataacatct atagcagttt gtatcaaaat atttcaaaaa aagcagataa
    22621 aaagacgaaa aaagatttta aagccaattt caaaaaagat gattaaagaa agaaaaattt
    22681 gtataaaaaa tatgcaaaat acaaaagcag gggaaaatcc tattttatct ttactcaatg
    22741 caagtgattg tatgtaagaa gcttatgcta aagctttatt agagcttacg caaagagcaa
    22801 aaaagataca aaaactaaag aagctttaga gcaaattttt aaaaataaag ttgataaata
    22861 tgaaaattta ctcactcaaa gtttaaatac caataaagct ttgcaagatt ttatagacag
    22921 cttagctaaa gaagatttga ttgattctag ggctaaattt aagttttagg gcttagatcg
    22981 attgcaaatt tagctgcttc aaaataactt ttagtgttga ttttagcatt tttataggcc
    23041 ttatcaaagg ctgtaccatg atcaacgcta acgcgtatga taggtaaatt taaacttaca
    23101 ttgatgcttt tatcaaaata caaggccttt aaaggagcaa gggcaagatc gtgatacata
    23161 gctactaaac gattgcagtt ttttaaacca gccttggtaa aagctgtatc agctactaaa
    23221 ggatagggta gataaacgcc cttgccttta aaatttaaaa gcaattcttt ttttaaattt
    23281 tcatctttta aggctttttt gaaaaatttt tcatcttttt tagagtgtaa aaaggcatta
    23341 acaaaggcta tagctttttc catgatcttt tcttcttctc cgcctataac tccataatct
    23401 ccagcgtgag ggttaaaacc taaaagtcct atttttttaa aatgcgtttc tttgtaaaaa
    23461 tcttttaaaa agatacttaa atttttaaaa gtgatttttt tactcacctt agctaaaggt
    23521 atatgttcgc taaaaagccc tacaaaaagt tctttacaac ctaacatcat aatggcattt
    23581 tttttaaaaa aatcccttaa agcatcggta tgtcctttgt atttaagtcc tgcatcttcc
    23641 caagcttttt tgtgtatagg tagagtaagc aaggcatggg cgtgtttttc atagacaaaa
    23701 taacttgccg ccttaaagct taaaaaacca taaagtccac tttttgcatc tatttctccg
    23761 gctttgattt caaaattttc atccacttta aagcctaaag gaaggcaaaa agagtaaatt
    23821 tcaagagaat tttctttttt tataaaatta aattcatagt cttttccatc tttaaaagct
    23881 acgatttttg cattaaaaag ttttaaattt aaaagttttg aagctttatc aagcaagttt
    23941 tcgtggataa aataaaaagg tgtgcagatt ttgcttagtt cttcatgaga acgcactaaa
    24001 atttcaagtc ctatgctgtt tatatcgcct atgctaatgg ctagtttttt catcttttaa
    24061 taagttcttt catttccaaa atagcgtttt taagtcctgt aaatacagat cttgctacaa
    24121 tactttgtcc tatatttagc tcacaaattt ctttaatttt tactacgggt tttacatttt
    24181 tgtaatttaa accatgtccc gcggctactt ttaagccaag ctctacgccc tttttagcac
    24241 agagttttaa attttgcaat tctttttcaa attgagcttg caaggttttt ttatcttgat
    24301 tgagttcttt taaggcaaaa gcagtatgag agatattact aaaaagtgcg ttgtgcaaat
    24361 tcgcataatg tcctgtatga agctctatga attgggcttt taaaattttt gatttttcta
    24421 tatcttctaa actaggattg ataaaaagtg aaacttcaat gtttgcattt tgaagttttt
    24481 ctatgctttg ttttaattta gcatgattta aacaaagccc cccttctgta gtaagctctt
    24541 ctcttttttc aggcactaaa gtaacgcggt ggggtttgag tttaagagct aaatttaaaa
    24601 tttcatcatt taaagcacat tctaaattga cagggctttt gcaaaatttt ataatatttt
    24661 ccaagtcaaa atcctgagca tgacggcgat cttctcttac atgcaaagtg atttgatctc
    24721 cgtgtctagc tactataaaa gcagcttcta aaagatcagg atcatttacc attctagctt
    24781 gtcttaacac tgcaatatga tcgatattta cacctaaaag catatttttc ctttagaact
    24841 ttttttgcta ttatactata aaatcaaata aggaaagtca tgttaggtat agatcttggt
    24901 tcaaatactt taagagcagt acaaatggat gaaaaattaa ataaattaaa agaatatgaa
    24961 tttgttattg gggcagcgaa aaatctaaat caaagtggag aaatttctaa agaagccata
    25021 caaagattaa aaaatacttt gagtatttta gctaaagagc aagatttaag caaagcgaga
    25081 gctgtagcga ctgcagcttt tagaaaggca agcaatacaa atgaaatttt tgcccattta
    25141 aaaaaagaat ttgggattga ttttaagctt atagatgcca aaagtgaagc taagatcagt
    25201 gttttaggta tgcaatcagg tttaagaagg cttaaaattt ggggagagtt tgcatattgt
    25261 gatttaggag gggcttcttg tgagctttct tttggaaaaa gttttaaaag ttttgatttt
    25321 ggtattatta gtttttatga aaaaaattac cattcttatt ataaatcttg tatttcttat
    25381 aaaaaattaa taaaaaaata tcctaaattt atcataaata ttaaagataa aaaacttaaa
    25441 attcattttt taattgcaaa tccctattta aagcatttag cttttagggc ttttgatgag
    25501 gtggctatga ttaaaaagga acttcgttct ttaggagtta aaacggtggt tttaaattcc
    25561 ggagttccta ctacacttag cgcattaaaa caaaatataa gctatgaaaa gtatgaagca
    25621 agtagagtaa atggcaaaaa actttaccat aaggattttt taaattatgc tattaaactt
    25681 tttcatatgg aagaaaaaaa ggctataaaa gaagtaggcg cgatgagaaa aaattatttg
    25741 agtgcaggtt gtttgctgtt ttatgctttg tttgataaac ataaacttct agtcattgat
    25801 gagggtttaa gggagggggt ttgtttagcg agtatgaaaa atataaaatt ttagtttttt
    25861 tgaaattcga aaaaatgaaa tttttcatca aaattaaaaa ataaaatttt agcttgagat
    25921 aaaaaacttt cgtaagtttt aatgttttta ttttttgtgt attttaataa atcttcaaaa
    25981 ccaaaatcca ttaaagcaag actttgtttt ttaaaagcta aaggtttaaa atcatattct
    26041 ttgatgagtt tttgaagatg agtaaaattg acattataag ttagatcgct tttgccgaaa
    26101 aaatctttta aagatacttc aaaagggcta aaaacttcgt gcttttgata gattcttaag
    26161 ctaaaacttt gtggatttaa agttccatag tcaaatcccg caaatataaa tctctcacaa
    26221 gtttggttta aatctttaaa aaaattttca agctctaaac tgagttcacc ttttttaaga
    26281 tttaaagctt tgcattttgt gattaaattt tcatccatat ttttaaaaat aagtttaaaa
    26341 ttttctacaa atgccatttt atcatgatct ataagttcgc aagcaaaact atcaaaaagt
    26401 tcattgcaaa agaaaaaagc gttcttaaaa tggcattctt taagactatc tttgtgagta
    26461 aattccactc cttctaaagt ctttttttgt aaagttctta atttttcatg cggttctatg
    26521 acgaaaaaag aaatttgaga aaaaatttca ggtcttaatt caagcaaagc ggctaaaaaa
    26581 tcacgactta aatatccttc attagcgcct atttctacaa gttctaaagg gagttgtaaa
    26641 atttttttat ctattaaatt taaaaaatgc ttggctaaaa gtgtgccaaa aagatttcct
    26701 acgcttacag cagtaaaaaa atctccgttt tttcctatac ttacagcatt tttataatag
    26761 ctttcatgga gccaagcatg gaaaaagtca ctaaatttca ttgaaaaata gcattaaatt
    26821 tggatacaaa atccaaagga tcaacttgtt tgcctccagc taaaattcca aaatgcaaat
    26881 gcggcccact taccctacca ctagccccac taagtcctat aagttcacct ttttttatct
    26941 tttgtcctac tttaacatcg attttagaaa gatgataata ttgtgaataa attccaaaac
    27001 catgatcaat gactactgaa tttcctgcga aataacgatc ttttgcaatt tttactacac
    27061 ctgaattggc tgcataaata ggcgttcctg tggcggctct aaagtccgtt ccactatgat
    27121 aacttgctac tttttcatta aaagttcttg ctttgccaaa atcacttgtg ataaaagaat
    27181 ttaaaggtat attaaaagca ccgttaaata aagcttttgg agtataagaa ctataaatcg
    27241 cattggcttc ttttaattct ttagcgatgc gttcttgtat ggtttttggt ggaaaaatct
    27301 ttttgttttc aacttgcaat ttttcacttt tataattacc ttctaaagtt tttatgaaaa
    27361 tttcttcttt tttatcttta taaaatgcga taagttttgt attttgcggg ggatttttgt
    27421 aaggtaagga aaaaatagct agaatttttt cttgattttt aggatgtgca aaggtgggaa
    27481 tatttttatc attatttttc aaagataaaa aatctttctt atctagttcc aaaaataaag
    27541 cttgaccttt gatgagttct aaattttgag ctccaaaaag ccaaagagta aagcttaaaa
    27601 aaagccataa ggctttcata ggcttaactc tttaagatcg gcgattttta aaaactccgc
    27661 ataaatttca taaaccaaag cttggcgatt atttttaagt ttttcatctt cagcattaat
    27721 catcacttga ttaaaaaact catcaataaa aggcttaagt gcaaaaagat tttcaagttt
    27781 ttcttgtaaa gagttggctt tagttttttc ttgaaaagct ttgtaaagtt tactttctgc
    27841 ttcttgaaca aaaagacttt catcaacttt atgaggattt ttagtggcga tattggctag
    27901 tcttttaaag gttgcaaaat tttcattaaa attatctttt ttgctaagtt ttataagagc
    27961 atttacgctt tgattgatat ggataagatc tgtattgtgt gagcttaaaa ccgcttttac
    28021 aaaagaagca ttgactgtat aaaaagtata aagtctttca aaaataaaat cttttaaaat
    28081 ttgcatatca aagcttttat aatgatttga aagtttttct aataaaattt ggatatcaaa
    28141 ttctttattt aaatttaaag caattttaat gatcccattg gcagctcttc ttaaggcata
    28201 aggatccttt gttccgcttg gaatttttcc tatgctaaaa agtcctataa gggtatcaag
    28261 cttgtttgca agggctacta tgcttgaaaa ttctgtactt ggaagtggag cttgttcgga
    28321 attaggaaga tattgttctt tgatggctaa gcaaatttga taatctaagc ccattttttg
    28381 tgcataataa cttcccataa tgccttgcaa atcagtaaat tcataaacca tttgtgtggc
    28441 taagtctgct ttggcgtatt ttagtgctgt gctgatattt tcgattttat cattatggag
    28501 catttgacat aaaatttcag caattttaat ctctcttaaa cttttatctt gcattgtgcc
    28561 taaaccttca agataggtca ttttggcaag tttttcaggt tttaagccat tttgtaaatc
    28621 attttgataa aaaaacattg catcgctaag tcttgcacgc aaaactcttt catttccatg
    28681 tatgattttt gaataatcct tacatactgc attacttact actataaaat gattacttaa
    28741 gcctttatcg ttaaaaactg caaaataacg ttgattttct ctcattgaag tgatgattac
    28801 ttcgctagga atttctaaaa attcttcttc aaaacttcct aaaagtgcat taggatattc
    28861 tgtgatagca actacttcag ctaaaagctc ttcatcttct ccaatttgta tatttttttg
    28921 actttctatg agtttaaatt gctcaagtat tttttccttt cttttgattg gatcaaggat
    28981 gatatagttt ttttctagta gttcaaaata ttcttttgca ttgttaaaat cttgcaaatc
    29041 ataacttacg cttctgtgaa tgaaagtttt tttagtactt tttactccat agctttgaaa
    29101 attaacaagt tcatcattta aaatgcaagc tatagaacgg atcgcacgga tgaattcaaa
    29161 agaatttgca ccccagcgca tacttttgcc aaaactaaga ctttttagaa atttttctac
    29221 catttctcct aaaatttctt gactttgcaa acctttaata gctttttgat ggtacaaaac
    29281 ttccttgcct ttgatttctt taaaagagag ttcattttca ctgatccttg ctttttgcag
    29341 gaagctttgt cccgcaggag ttaaaactcc atctttataa gcaacatttt taggtgctcc
    29401 tataaattca gcaaagctat cttcttgttt gtctgcaaaa ttttcatgaa aaaaaactaa
    29461 acgacgcgga gtataataaa atttaaaatc acttaccaag cggtattctt ctaaaacatt
    29521 gttccatttt ttttctatat tagctaattc ttttagcaaa ggaatagcag gtaattcttc
    29581 tgtaccaatt tctattaata attcactcat aatttactct ttttaaaatt tatttctaat
    29641 tttaactaaa atttcattaa aaaacttata aatacttttg caaaaagcct ttaagttcac
    29701 tagcgttgct aaattcattt tcttttaaat ttttttgata ccatttggca tgaaaataag
    29761 gcaaattggc atttttagca cattctttat ctttttgact atctcctata aaaacgcttg
    29821 ttttatatgg agcctcgctt tttaaaagct ctagcatcat aggatgaggt ttgggttcta
    29881 tgcctaaact tacgcctaaa attttatcaa aataaggaat gatatcgtgt tttttaagta
    29941 tgtttgaaag tgagctttgc ggggcgttag tagcaatagc taaaaaacaa tttttgcttt
    30001 ttaaaaattc taacagttct ttcacccctt caaaaagcac cacgctttgt tcatagtgtt
    30061 tgacaaaata tttttcgtag ccttctttaa aactagaatg atggaaattt tctatattat
    30121 aaagttcttt tgcccagtca atattaggag tattgatggt ttgcataatg atttctcttg
    30181 aaagtggggc taggtttaaa tcctgtctta tttcattgac tgcacaagaa atggcatttg
    30241 cgctatcgat taaagttcca tccatatcaa aaaatacatt aatcattcat aatcctttaa
    30301 ataatttttg tgtttttctt ttttctcacc ttgttttttt tgcttatcta aagcattggc
    30361 aagatttaaa agttcgcttt tttctttgga aaaatctaaa caagcattga caaaaaattc
    30421 aagatttttt gcataggttg agttaagatt taccgcggga tttttttcaa aaaatttagc
    30481 attttttagc attctttctt caaatttagt tttatcaaaa tcttcttttt taagtgcaga
    30541 tatagcgcca ttgaaaaatt tttcaagatt tcttaggtat tttacgcgta aggctttttc
    30601 ttcatttttt gtcaaaattc ttccttaggt atttttatga atgcggcatt ctagtgcttc
    30661 ttgaactaaa tttctagcga ttactttttc agagcgaatg atgcgtatat tttcatctat
    30721 gctagaaaaa agcatctttt tcaaagttcc atttacatga atgatagtat ctataggttt
    30781 tggataatta gctagcactt gacataaaat ttcaagttta gcttcatttg taactgtgat
    30841 aatagctacg gcacattctt ctatattggc aatttttaag gtttcttctt gagcagcatt
    30901 ggcaaaaacg acattttcac cccgactaac tccaagttct actaaattta aatcactttc
    30961 taaaacaaga taaggtacgc ctgtattttt gattttttgt acaacttctt gtcctaagcg
    31021 tccgtagcca aaaacaacaa gatgattttt aagcttgata ttactgtcaa tattttgcac
    31081 agcgttggta ttaagtgcta tatcttctac aacattggta atttttctta tattgtttaa
    31141 aataaaaggc gtgataatca tggttaaaat agaaacaaca attaaaattt gtgaagtttt
    31201 gatatcaagc atattttttg cttgtaaaag agaaaaaatt gctagggcga attcgccaat
    31261 ttgcgctatg gcaaaagctg ttttaagcgc tactcttttt ttggtgtaaa gaaataaaaa
    31321 gccaaaaact atgccaaatt ttaaagccat tacaagaagg gttaaaacta tgattaaaaa
    31381 ccaattttgc gccactacat caagttgaat ttgcatgcct acagttatga aaaaaagccc
    31441 taaaagcaaa tctctaaatg ggatcaagtc cgcttctatt ttgtgtttat attttgtttc
    31501 tgctatcaaa gcacctgcta taaaagcacc caaagaataa gaaaatccaa aataatttgc
    31561 taaaaaactt gctccaataa ccataaataa aacagtacta ataaaaattt cctgagaaga
    31621 agtgtggata atgagtctaa aaattctatc cactagatat ttacctatga aaaataataa
    31681 agtgattaaa ataagtgctg aaattaaact ggtaaaaagg agtttttcta tgttttgatt
    31741 gttggatgaa aaaatatcta caagcaaaag caaaggaata acggctatat cttgaaaaag
    31801 caaaattccc aatgcttttc tgccatattg ctcatttata tcgccattat catttaaaat
    31861 tttaagcacc actgcggttg aagaaagcgc tagtgcaaag cctactatgg tagcgctttt
    31921 atctccaagt cctaaaattc ctatagcaag tagcataaaa acaaagccac aagtaagcat
    31981 ctgcaaagag ccgtttaaaa aaacttcttg tttcattgcc attaaatgct taaaagaaaa
    32041 ttcaagccct atggtaaaca ttaaaaacac tataccaaat tcggctatat gagtgatttc
    32101 gcctttgcca cttaaatgat aaatttcaga aatgatttct ccagcagcta tatatccaat
    32161 gatagttgga atttcaaatt ttttaaatat gacatttaaa actatagcta tagcaacggt
    32221 gattaaaaaa atttctaaaa aattatccat tatttttatt ttttctcata aaaaatcaaa
    32281 tcaaagctat ttttatgctt aacaacggct ttactagccg cttctttatc ttgttgtttg
    32341 cttaattcta agcgtagttc atcaattaaa ttttcaaatt cgtgaagttg gtttttcaat
    32401 tttaagataa catctactcc agcaagattg attcccatgt ctcttgttaa acgcaatata
    32461 agtttaatac ggtcaatatc tctttgagaa taaagtctta ttttgccatc ggttctactt
    32521 ggctctatca atccttctct ttcgtattgc cttaaggttt gtggatgtat gcttaaaact
    32581 ttagccacaa cactgattaa atatacaggt tcatcataat gctgttccat attttattcc
    32641 tttctttaag gtaatttttc ttttaagagt tctataaatt tttcatcaag ggtatctaaa
    32701 tttggcaaaa caacatttaa aatcaaatac atatccccat aaatatcact ttttctattt
    32761 tgcactccat agccttttaa acgaattttt tggttatttt ttgaattagg cgttatgtta
    32821 attattgctt cttccttgcc ttctttgagt gtttttatat ttatttttcc accaaaaagt
    32881 gcagttttta aagaaatatc aaccttttga tataaatcat catcttctct tgtgtaaata
    32941 ggactttctt ctatttttac aataatgatt aaatctcctc tagctccatt tctgctttgt
    33001 tttcctttag agcgaattct tagtttctcg ccttctttta taccatgtgg aattttaaat
    33061 ttaatggttt cgccttgaaa attaaaacta tgttccccgc ctttaacagc tttttcgaaa
    33121 ggaatgtgaa gctctagatt gctgtctaaa atttcttctt caaaacctcc aaatcctcca
    33181 aaaccactgc taaagccttt tgaagaaaag ccgttaaaac cccctcttga gcgtccacca
    33241 aagcctcctc caaagagatc ttttaaaata tcgtccaaat ttaccccacc agtatttctt
    33301 gaaaaatcat gaaaactttg tccaccaaac atagaatcgc cgtattggtc atactgagct
    33361 cgtttttttt cgtcacttaa aatttcataa gcagcattaa tttctttaaa tttttcttca
    33421 gcaccttttt ctttgttgat atcaggatga tattttctag ctaggcgacg gtaagctttt
    33481 tttatttcat ctgcactagc gtttttgcta actccaagag tttcgtataa actattcatg
    33541 ttatatttcc ttaaaaattt ttacttgatt atatagagga ttaaattata acataaactt
    33601 tagcctaagt caatcaagtt ttataaattt ttatcactca aggttttatt tacaattttg
    33661 taaattttcg gttttatact atgaagacag taaaatattt tacgagataa tttatcttta
    33721 agaacaaaag gaaatgaaat gaaaaagatt tttttatcat taagtttagc aagtgcttta
    33781 tttgctgcaa gtattaattt taacgaatcg actgcaacgg ctaatcgtgt gaatcctgct
    33841 gctggaaatg cagtgctttc ttatcatgat tctattaaag atgcaaaaaa atcagtggtt
    33901 aatatttcca cctcaaaaac tattacaaga gcaaatcgtc caagcccttt ggatgatttt
    33961 tttaatgatc cttattttaa acaatttttt gattttgatt ttcctcaaag aaaaggaaaa
    34021 aatgataaag aagtggtgag ttctttggga tcaggggtga ttatttcaaa agatggttat
    34081 atagtaacaa ataatcacgt tgtagatgat gctgatacga ttacagtgaa tttaccagga
    34141 agcgacatag aatataaagc aaaacttata ggtaaagatc caaaaacaga tttggctgtt
    34201 ataaaaatag aggctaataa tctttcagct attactttta caaattctga tgatttaatg
    34261 gaaggagatg ttgtttttgc acttggaaat ccttttggag ttggttttag tgttacaagt
    34321 gggataatat ctgctttaaa taaagacaat ataggtttaa atcaatatga aaattttata
    34381 caaacagatg cttctatcaa tccaggaaat tcaggtggag ctttggtgga tagtcgcgga
    34441 tatttagtag gtattaattc agctattctt tctcgtggtg gtggaaataa cggcataggt
    34501 tttgccatac cttcaaatat ggttaaagat atagctaaaa aacttattga aaaaggcaag
    34561 attgatagag gatttttagg tgtgactatt ttagctttgc aaggtgatac taaaaaagct
    34621 tacaaaaatc aagaaggagc tttaatcact gatgttcaaa aaggttcaag tgctgatgaa
    34681 gcagggctta agcgtggaga tttagttact aaagttaatg ataaggttat aaaaagtcct
    34741 attgatctta aaaattatat aggaacttta gagattggtc aaaaaatttc attaagttac
    34801 gaaagagatg gagaaaataa gcaagcaagt tttattctta aaggcgaaaa agaaaatcct
    34861 aaaggcgtac aaagcgattt gattgatggt ttgagtttga gaaatttaga tccaagactt
    34921 aaggatcgtt tgcaaattcc aaaagatgtt aatggtgttt tggttgatag tgttaaagaa
    34981 aagagcaaag gaaaaaattc tggtttccaa gagggtgata ttatcatagg tgttggacaa
    35041 agtgaaatta aaaatttaaa agatttagaa caagctttaa aacaagttaa taaaaaagaa
    35101 tttaccaaag tttgggtata tcgcaatggt tttgcgactt tgcttgtgct taaataaaaa
    35161 taacggaagg attttccttt cgttataaat tttagtttaa aattaaaatt aagtttaaaa
    35221 taaaggaaaa ctatgacaaa tattcttatg atagaagatg atttagaatt agcagaaatt
    35281 acagctgaat atttggaaaa atttgatatg aaagttgata tagctcatga accttatata
    35341 ggtctttcta agcttgcatt aaaagaatat cagcttatca ttttagacct ttctttgcca
    35401 gggcttgatg ggcttgaagt gtgtgaagag attcgtaaaa agtatgatac gcctattatt
    35461 gtttcaagcg caagacatga tattacagat aaggttaatg ctttagagct tggagcagat
    35521 gattacctac caaaacctta taatccaaaa gaattacaag cacgtattaa aagtcattta
    35581 agacgtattt caaatacaaa aagcgccata gcaaaaagtg taaaagatct tgtttatgat
    35641 caatataagc atattattac catgaaagga caagagctta ctttaactaa tgctgaattt
    35701 gatattttaa gctatttgat taaaaaagag ggtggagtgg taagtcgtga agagcttgtt
    35761 tataattgtt cttctattag tgaggattct agtaataaaa gtatagatgt tattatcagt
    35821 agaattcgtc aaaagatggg agatgatcca aaaactccaa aatatattca ctctatacgt
    35881 ggaataggtt ataagcttac tcaatgaata aatcttcgat tttttatact ataactttta
    35941 tttttatttt tgctggggtt agtgttatac ttggcttttt gtggcttata gaatatgatc
    36001 agcaaaatta tactagagaa ttaaacacaa aatattcttt gatagctaat gcaaggctct
    36061 taaattttgc aggagttatc agtgaaaaag aatttgaaga gcagacaaaa aattataata
    36121 aaatggatga gataacagaa gcaaagcaga tccgtaaaat tctttttaga ggtgatgttt
    36181 tagctagggt tgaggttaac aatggcttaa tcgagattat ttcttataat agacaggtgt
    36241 atttaaatat tatttatgat ggaaaggttt atctttataa ggatcaagat tatcaaacct
    36301 ataggtattt tattatcaaa gctatagctg tagctgtgat ttgtattctt gtattgcttt
    36361 atatttatat atttaaaaaa ttaaaaccac ttaaaagact taaaaaacaa attgataaat
    36421 ttgcccaagg aaagcttggt gatatagaag atgtaagcac tggggtggat gaaatttcac
    36481 aagtaagtga agctttttat caagctattg ttcaaattcg aaagttaaac caatctcgtc
    36541 agtttttttt aagaaatatt atgcatgaac tcaaaactcc tattactaaa gggctcttaa
    36601 ctttagaaat gatagaagat aataaatata aagagcgctt aaatggggtt tttactagac
    36661 ttgaaatttt aattaatgaa tttgctgcta ttgagcaaat tacttcaggg gctgctttta
    36721 taaatagaaa aaaatacaat attttagatg ttttagatga agccaaagaa attgcaatgc
    36781 gagatgatag caatatacgt atttttatgg aagaaagttt ttttgtaaat gtggatttta
    36841 aactttttac tacggcgatt aaaaatatga tagataatgg tattaaacat tctgaagatg
    36901 ggtttgtgca aattgatatt atagatgatt atatttgttt taaaaatcgt ggtcctgagc
    36961 ttaacaatac tttagaatac tatactcaag cttttactca aggatcaaaa caaaaatcaa
    37021 gttttggatt agggctttat attgtaaata ctattttaga aacacatgga atgaagcttg
    37081 attatttata tgaagatggg gtaaatttgt tttattttag aaatttaaaa agtgttattg
    37141 ttaaggagta aattaatttt tttacataaa aaatgcattt ttgtgaaaaa acccttgaca
    37201 aagtttttta atttcactat aatcatattt tacttttaaa tattccggat tagctcagcg
    37261 gtagagtagt cggctgttaa ccgattggtc gtaggttcga atcctacatc cggagccact
    37321 tttttaactc catttttaat attcataaat gtattttaat ataaaaaatt aataagtctt
    37381 tatcacaaaa aaattgtgat aaagtttttt attttgtttg tttaagattt ttgacaattt
    37441 tatctatttt tttacttgcc ttttgataat ccccatcttt aagttcttct agggcattaa
    37501 cagcaaaaga aaaatcttca acttcattaa gataagcctc tatggcttct tttactatgg
    37561 ttgattttgg tttagaaaga tttttactta aattatccaa acgctcctta agctctaaag
    37621 gcattctaaa agaataagtt tttacattgc gtttcatttt atcctcctta agaatatttt
    37681 ttgtaaaatt ttatagcttg tttacaagtt ttacaagtaa atttacgacc ttgtaattct
    37741 attttttgat gaatgctata aggaacatcg tgaattttac caggacaatt acaggtataa
    37801 agataaaatt gtggatgttc attatcttca tcttctgctg cttcaaagct aacatcgcca
    37861 ccatcatctg tagacaaaga agaacttctc catttttcaa ctttcatgtc ttcatatagt
    37921 atgtgttcta aaagccactt tttagccact atataaagtt tttctttaag atcattggtt
    37981 gatttgatat ctttgattaa attaatcatg gtttggatga tttctttatg tatttttcga
    38041 tgttcttcta aatttggata gcctattagc tgcatgtatt tttcttcatc attaaagtga
    38101 tctttcatat aattaaaaaa ttcagccaaa agttctttga cttcattttt acttacagat
    38161 ctatctgata caacttcaac ttttgcagca agtttaaaaa gctttttatg ctgctcatca
    38221 attttagcat tgtgcacact atagctgtta tcccattttg gaagcatttt aactccttaa
    38281 ggaaaaattt atttgtatga aaggattata gataaaaata aattaaataa aaatgaaatt
    38341 ttattaaata attgataaga attttgatac aatgatatat atttaagaga tttgaagtta
    38401 gaaagattta aattatggct gctaaaattt tacttttaga agatgatttg agcttgagtg
    38461 agatcattga agagttttta aacgatgagg gatatgaagt atttttatgc gataatgcgc
    38521 aagaagcttt agatatggct tatgaaagat attttgatct ttggatttta gatgtaaaag
    38581 ttcctttagg agatggattt tcattactta aagaattaag aaaaagcgga aagcaaactc
    38641 cagcaatttt catgacttct ttaaacacaa caaacgattt aaaacaaggc tttgacgcag
    38701 gttgtgatga ttatataaaa aaaccttttg aacttgccga gttatctatc agggttaaag
    38761 ctttgcttaa aagagctttt tcacataaaa atgaagattt tgaagattta ggagatggat
    38821 ttagatttga atttactaca caaattcttt accataataa taaagccttg actttaccga
    38881 gtaaagaaat taagcttttg tctttattac ttaaaaataa aaacaacttt ttaagtacag
    38941 agagaatttt tgaagaactc tgggattatg atgaggagcc tagtgagcta agtttaaggg
    39001 cttatgtgaa aaatttacgt aaaattttag gaaaagaaaa aattataaat caaagaggca
    39061 ggggatattg ctatggctaa aaaagtcatt aggcaaattt tattaatcta cctaacaact
    39121 acaggtattt ttttaactat tttttttgca ttatggtatc aaaaattata tgaagaatta
    39181 gttgttttaa agggtgccac tttgagagaa aatcatagaa acattgttat aagcatctta
    39241 aattctcgtt ttacccctat agatataagt gcaaaaaata ttgctcaaag cacagcacta
    39301 aaatttgcta tatttgatgc taaaaagatt gtttttagta atatagattt tgatttaaga
    39361 aaggcaaaga tagagcttaa aggtagaggt atttgtgata ataaggtttt tttccttgct
    39421 tctatgagtg cagatcatta ttttttaaga catgctagca atgaagaagt aaatactaac
    39481 gatggtttgc aaattttaat acagggtgaa gatgttggca aagatctttt ttggattaga
    39541 acgaaagttt ttagttttgc tattatggct ttttgcatat tgggtttaat atcttatatt
    39601 ttagtaaaaa ttgctctaaa gcctttggag gataaaatca gcacactaaa tcgttttatt
    39661 aaagattcaa ctcatgaact caatacccca ttaagtgtta ttttgatgag tatagaacaa
    39721 cttgagcatc aaaatttagg agataatact aaatttacaa ggattaagct tgctgcaaaa
    39781 agtttgtctc aagtgtactc tgatcttgtt ttttataatt tccctaatac cttagaaaca
    39841 gaaaaacaaa aatttgattt aagaatacta cttgaagaaa gattggaata ttttaaagta
    39901 ttttttgagc aaaaaaaaat tacactaaag cttgatttaa atcaagcaaa tatttttgct
    39961 cctaaaagtc aaatttctaa attgattgat aatcttataa gcaatgctat taaatacaat
    40021 aaaaaaggtg gagtaatttc tataatttta aaagccaatt ttttaagtat tgcggataca
    40081 ggttgtggaa tttcaaagtc aaatttaaat catatttttg atagatatac aagatttaat
    40141 accgatcaag gaggatttgg tatagggctt tctttggtaa aaaaagtttg tgatgataat
    40201 gatattaaga ttatttgcga atctgtagaa aatcaaggga gtgtttttaa attaaattgg
    40261 taatcagcaa ggaaaatcct tgctgataag aggttagagc agatattaca tcattccgcc
    40321 catgccaccc attcctccca taccgctcat atctggcata gtaggtttat cttctttaat
    40381 ttcactaatt gttgcttctg tggttaaaag catactagct acagaaactg cattgagtaa
    40441 agctactctt tctactttaa caggatcgat aattccactt tcaagcatat taacatattc
    40501 accttttgca gcatcaaatc ctgtgttttc atctttagca ttttctacgc tatttacaac
    40561 cacacctgca tcaaatcctg cattttcagc aatttgtctt aaaggtgctc ttaaagctct
    40621 ttcaacgata gctgcgccaa ttgcttcatc accctgtaga tcaagtttga ttttagcttt
    40681 tgctttgata agcgctgcac caccaccaat tactatacct tcttcaactg ctgctttagt
    40741 agcgcttaaa gcatcgtcaa cgcgatcttt tttctctttc atttcagttt cagttgctgc
    40801 acctacttta ataactgcaa caccaccact taattttgca agtctttctt gtaatttttc
    40861 tctgtcataa tctgaagttg tttcagcaat ttgtgctttg atttgattga ctctcgcatc
    40921 aatatttgct ttttcgcctg caccatttac tatggttgta ttgtctttat cgatgattac
    40981 actagaagct tgtccaagat cttgtatagt cgcactttca agagttcttc caagttcttc
    41041 agaaatcact tctccacctg ttaaaatcgc tatatcttca agcatagctt ttcttctatc
    41101 gccaaaacct ggagctttca ctgctgaaat attaagaaca ccgcgaagtt tatttacaac
    41161 caaagttgca agcgcttcac cttcaatatc ttcagcgata attaaaagtg gtttgcctgt
    41221 tttttgaatt tgttctaaaa ccggtaataa atcttttaaa tttgtaattt ttttatcaaa
    41281 aagcaggata taagggcttg aaagctctac tgtcattttt tctgcattag tgataaaata
    41341 agggcttaaa taacctctgt caaattgcat accttcaact acatttaatt catcattgat
    41401 tgattttgcc tcttcaacag tgataacacc atctttgccc actttttcca tagcatcagc
    41461 gattaaattt ccgatttttt catcagagtt ggctgagatt gtagcaactt gtgcaatttc
    41521 ttttttatct tttacttcgc gagaaagttt tttaagttct gctactatag cttcgcaagc
    41581 tttatccata ccgcgtttta cctcgatagg atttgcacct gctgtgatat ttcttaaacc
    41641 ttctttgaaa attgcatgag ctaaaaccgt tgcagtagtt gttccatcgc ctgcttgatc
    41701 agctgtttta ctcgctactt ctcttacgag tgaagcaccc atattttcaa gactatcttt
    41761 aagctctact tctttagcaa cacttacgcc atctttagta atgcttggag caccaaagct
    41821 tttttggatt aaaacattgc gtcctcttgg ccccatagtt acttttaccg cgtcattaag
    41881 ttttttaacg ccctcataaa gtttatttct tgcttcatct gaaaaaataa tttcttttgc
    41941 cattttttat ccttttttat aaattatttt aaaattccta agatatcatc taaatttaaa
    42001 actaaatatt cattattatc aagtttaatt tctgttccac cgtatttagc aaacacgatt
    42061 ttatcaccat ttgcaatatc agtgatttct ttacttactg ctactacttc acccattaaa
    42121 ggcttttctt tagcattatc tggtataatt atgcctgagg ctgttgtttt agtttcttct
    42181 acgcgtttaa ctagaacacg ctttcctaaa ggttgaaaat tcatttttgt ccatccttaa
    42241 aaatattgat tttagcactc tttaatttag agtgataata tcatactata aaaaatgaat
    42301 tttgtcaata ctttaaatta aaatatttat aaaagtttag ttttatagac taaagttatt
    42361 ttataaaata aactaaagga taaaaatgaa aaagattttt tatggcattg tagcttttgt
    42421 tgttgtgctt ttaatcgctc tttataccat actttttaca agttttggta ataatatagt
    42481 ggcaaatata gcacaaaaaa agatcaaaga aaatgcggga ttagatgtaa atatcacgcg
    42541 ttttaatttg cgtttttcaa gtcttgaact gcaagcaaat attgcaaata tggcagattg
    42601 taatcttcag ggagctttga gtccttttaa gcttggattt gatcttgact atcttatttc
    42661 tttaaatcaa aattatgcta aaaatttagg tttaaattta aatcgaaatc tttcttttgg
    42721 cggtaagatt caaggtaaag caagtgattt tactttagat ggaaagggtt atttactagg
    42781 ttcaaatgta cttttaaatg caagaatgta taattacagc cctattgctt taaatttaga
    42841 tgcgcaaaat cttaagatag aagaaatact tcatctttta tcttacccta gttacgctaa
    42901 aggtttttta aatgctcaag caaaaatttc agcacagaat ttaaaacctg atggaaatat
    42961 catcataaaa cttgatacaa gttatataaa ctatgaggcg ataaaaaaag atttttcttt
    43021 agacttgcct ttaaattcta atcctaaagc agaaattttg gccaatgtta aagaagataa
    43081 gatttatgct gtaagtaaaa tttacaatga ttatcttaac ttacaaaccc aaaaaactct
    43141 ttatgatatg agtaagaata ttttaagtac tgattttaat ttaaatattc cttctcttgc
    43201 aaagcttgaa aaacttacaa aaactagatt aaatggtagt ttgggcgtga taggcgaaac
    43261 aagtgttgta aataatgcct tatcaagttt aaatgctcaa gttatcggac ttggtggaga
    43321 ggtaaaggca agtttgaaaa ataataaaat ttttgcagat attaatgaag caagtttgga
    43381 aaaattatta gctcttgcag gatacggagc tttggtttct ggaaatttaa atgctaaact
    43441 tttaaatgca gatttggatt tttctaattt tgatcttgaa gcaaaaataa acaatgcaaa
    43501 gattaacacc aatgagctta aaaaattagc taaaatagag cttccaaata caatttttag
    43561 ttttgatgct aaagcaaatg caaaaaatag caatattgct tacaatgctt tgcttgcttc
    43621 aaatttgctt aatatcaaaa aacttcaagg aacttataat ttaaaaaata gtgagttaaa
    43681 tacagattta aatgctttta ttgatgactt gtcccagttt agtgctatag caggacaaaa
    43741 attacaaggt aaggcagatc ttactgcaaa agctcatatt ataggcactc aaatacaaaa
    43801 tttaaatgca aatgcaaatt tggcagatgg tgtaatcaag gctgattcaa atggtaaaaa
    43861 acttgattta aacattgata aacttgattt atctaaactt tttgttatag caggtatgcc
    43921 aaattatgcc agtgggattg ttaatgcaaa agttaattta gataatatcg attttagcaa
    43981 ccttaatggt aaagcaaatt tagaagctaa aggcatttta aatgccgcaa ctttaagtaa
    44041 aattttaaat aaaaattttc caaacaatac aagttatgat ttaaatacca aaattaattt
    44101 taaaaacaat atcgctcaat ttgattctgt tttaaattca tctttagctg atcttacaaa
    44161 actacaagga agttttgata taagcaaaat gcttttaaat tcggatttta atctaaagat
    44221 aaatgatttt tcaaaactag gttttttgtt ggatagaaaa cttaaaggta aggcagaatt
    44281 taatggaaag gtaggttttg ataagaattt aaattttgtt gtaaatagtc cgaatttatt
    44341 tgaaggaaag cttcaaagca cacttaaaga taaccttttg cttgctgatt taaatggagt
    44401 ggatttaagt agtctagctc aaggtttaga ttttatggat gtttatcaag gtaaggcaga
    44461 tgtgaaggca aattacaatc ttttaagcga agaaggagag gttaatttgg atatgaaaga
    44521 gggtaaatta aaaccaaatc ttattaccaa tgctttaaaa attttaacac taaaagatat
    44581 taccaatgat gtttatcgca ctgctaatgc taaagctttg attaaaaaag aaaatatcaa
    44641 gtttgatctt aatatgcaag cagatcgttc ttatatttta gtacaatcag gagctttaaa
    44701 ttctaaaagc ggggctttaa atttgccttt tgatattaaa cttgatagag ctaattttaa
    44761 aggaagtatt acaggaacta cggaaaatcc taaagtaaat ttaaatgcag gaagcgtgtt
    44821 aaattctatt aaaaatgtag taggcggcgg tatgagtgac ggtgctaaaa gtacaggtga
    44881 taaagtagat aaagcggtga ataaattatt aaataagatt ttttaaggta aaaaatgttt
    44941 aatggactca taagagaaat tgctaaagtt caatcttatc aaaacaatac tttaagctta
    45001 aaagcaaaat attgcccaaa tcttggcgat agcatagccg taaatggagc ttgtttaagt
    45061 gtaacaaaac tttatgaagg gggttttgaa gtggagcttt ctcgtgaaag tcgcactcat
    45121 atagttatag agaatttaaa agataaagtt catatagaac ctgctttaag atatggcgat
    45181 agaattgatg gacatcttat gcaaggacat attgatttta tcggcacact tgaaaagatt
    45241 caaaaagatg aaaatggagt ggatttttat atatctttac ccaaagaagc tatgaaattt
    45301 atggcagaaa aaggaagtat aggcgttgat ggggtaagtc ttactatcaa tgaaatttta
    45361 aaaaatggta ttaggcttac tattattcct attactttta aagaaacgct ttttaaagac
    45421 tatcaagtag gtagaaaaat caatatagaa agtgatttac ttgctcgtta tatttatgca
    45481 caattacaag gtaaaaacaa aggattatca tgggaagaag tcgaaagaat ttcttatctt
    45541 tattagaaaa tgataaagtc ggtatttttt gtgcttttga taaggattat aatgttttta
    45601 gagctaaaat tcataatgag aatttatttt ctcatttagg ttttaaagat attgaaaaat
    45661 gtgtttttat ggatcaaatt cattctcata aagttatcat ttatgatgaa aatttaaaaa
    45721 atctcagttg tgatggactt ataagcaagg aaaaaaatat cgctctttgt gttttaagtg
    45781 cggattgtct gcctttgatt ttatatcatg aaagtggtat tatagcagct ttgcattcag
    45841 gtagaaaagg aagctttgaa aatatcctaa aagaatgcgt tgatcaaatt actatgcaaa
    45901 attcacattt agataagaat aaatttcatc tttttatcct gcctggaatt tgtgctaaaa
    45961 attatgaaat agatggagaa attttagaat ttgctaaaaa agaatttaaa gaatttgttc
    46021 aagatgataa acttgattta aaagctttag taaaatttca agcgcaaaat ttaggcattg
    46081 aaaatattaa agattgtgga atttgtagct ttgatgatga gagttttttt tcttatcgtc
    46141 gtgataaaac gactaagcgt tttgtgagtg tggtttattt aaaggattaa aatgtatgaa
    46201 agaaaagatt taagggtgtt aaaaatcatt caaaaagcta gagaatttgg cgatggagat
    46261 ttgttaaatg aagctttggt gaaacaattg attgatgcag atttttgtga aattaatgaa
    46321 aaagaaaaag aagagcttgc aactcttcta cattctttaa tcaatgcaaa agataaagcg
    46381 ttattgagta attaaaattc tatatagttt tcaaaatctt cttcttttgg aggattaggt
    46441 tgattcgagg ctagggcttc tttaacaacc tgctcgtatc cagctatgat atgtttaaaa
    46501 ttctctttcg cttttccact aagttctgat ttggcgattt ttacaacaga tgcaggattt
    46561 atagctttat tatttaaata tactccaaaa tgcaaatgag gacctgtgct catacctgtt
    46621 gaaccaacat atgcaattac ttgtccttga tttacctttt gtccgttttt aatttttgca
    46681 aaacgactaa gatgagcata taaagtcata taacctgagt catgcttgat ttgaattaca
    46741 tttccataac caccttttgt gcctataaag gttactactc ctttgccagc acttttcaca
    46801 ggagttccag taggtgcagc atagtctata ccaagatggg cacgatagcg ttttaatata
    46861 ggatgatatc ttgctgttgt aaaaggagaa gaaattctag tgtaattcac aggttttgta
    46921 agtaaaaaag attctaattc tttgccatca cgatcataga atatatcatt ataagaaaag
    46981 acttctctag cgcttttatt gatttctacc attgccattt ttatatttat atcaccccaa
    47041 agtttaccca tgcgtctttt ttgttcataa tatagggtta cttcatcacc tttttggata
    47101 ttgcgaaaat ttatacttcc tcgaaaagca cgaaccatag cacgagctaa agtactgcta
    47161 ccactttctt catagacatc ttgataagca gagcttttaa tggttaaatg taaaattcta
    47221 tcttcttttt gataagatac aggagtaaaa gcaagagtgt attgtccatc tttatcttta
    47281 tagatatgaa tttgtaaatc atcactaatt ggaattaaaa cttgttctat gttgttgttt
    47341 tcatctttta aaacttgata ttttatttta taggctatat cagaagcaag ttcttgatct
    47401 tctctatcaa gtccataata aagcgacata ggtatggaat ttctttgtag gaatttaagc
    47461 aaggtatctc cattatccca agttagctct tcaacactta aagctgcaaa actttgaaca
    47521 acaaaaataa ataaaagcaa taattttttc atgagataac cttaattttt aaaagaattt
    47581 tgaaatttga aagctatatt ttactttatt tttcttacaa ttgcttaaca aaaaaggatt
    47641 ataattctat aaatttttat ttaaggagca aatttgttta aaactatagt gtgtttttta
    47701 gctttaaacc ttagcctctt tgcggttgga tttgatttaa aacctataaa aagtgaactt
    47761 gtaaaagttg atgatattta tggttatatt aaagatagtg atgatataaa actttattca
    47821 agtggcgtag tagtgcaaca ttttagcaat tcgcaaagta tcatcgctag agcaagtgtt
    47881 atagataaaa aaaatggttt ggcaaaatta gaatttagtg ttttttcagc tcttaagcaa
    47941 gatgctttgc ctttaccaaa tgttttacct aaagtaggtg atgaggttgt tttaaatttt
    48001 ctttatgata gaggattggt aattgctcct gatgaacaaa cttataatga acttgttaga
    48061 gaatttccgc agatatattt tacccatatt gatatttttg gagcacaatt aattagaacg
    48121 gctactcttt ctcctaagcg ttcagatttt aggcaatttt gtgatgataa tgcggtcggc
    48181 attttggttg tggctttgga aaatcatgca gaagttgtgg attgtcaaga ttttaataag
    48241 ctttatgaag tgcctataag caagccaact agcgttcagg ttccttttta ttctcgtata
    48301 ggtggatata aaagtaattt ttttgatttt aactctcaag aaataggaaa ttattatagg
    48361 tattatgatg ctttgattaa tcttcctaag gtgcaataaa catgaaaaaa gaatttgaac
    48421 aatattttaa acgattttta ggagaagaaa acgcttattt tgatgaaatt cacaaaagag
    48481 cttatagcta tgatgcgaca aaaaaacatt atttacccga tggggttctt tttccaagaa
    48541 atgaagaaga tattgctcga attttaaaat tttgtaatga aaataatatc atagtcatac
    48601 cgcgaggctc aggatctggt tttacaggag gagctttagc tgttaatggc ggggtggtgc
    48661 ttgcttttga aaagcatatg aataaaattt tagaaattga tcttgaaaat ttagtggctg
    48721 ttgtgcaacc tggggttatt aatatacatt tacaaaaaga agtagccaaa tacggacttt
    48781 tttatccacc tgaccctgct agcatggagt attcaagctt agggggtaat gtaagcgaaa
    48841 atgctggggg aatgagagct gcaaaatatg gcattacaaa agattatgtg atggctttaa
    48901 gggctgtttt gcctagcgga gaaatcattc gtgcagggaa acgcactatt aaagatgtag
    48961 caggttataa tttggcagga attttaatcg ctagtgaagg ttctttggca gttttaagtg
    49021 agcttacttt aaaattaata cctttgccta aatttaaaaa aactgctttt gctatttttc
    49081 caagtgtaaa aagtgctatg aatgcggttt acaaaagtct tgctagcggt gtaagtcctg
    49141 tatctatgga atttttagac aatcttagca ttagagcggt tgagagcaaa tttaataaag
    49201 gtttgcctat agaagctgga gctattttga ttgctgatgt ggatggtaat gttaaagagg
    49261 ctattgatga ggatttaaga aatttagaac attatttttt agaagctggc gctagcgaat
    49321 ttaaaatagc aaaagatgaa caagaaaccg cagatatttg gtttgctaga agaaattgtt
    49381 ctcaaagcat tgccatgtat ggaactttaa aacttaatga agatattaca gttccgcgtt
    49441 ctaaactacc tactttgctt gaaggtatag atgagatttc taaaaaatat ggttttaaaa
    49501 ttccttgctt tggacataca ggggatggaa atgtgcatac taatgttatg gttcctgata
    49561 aaaatgataa agagcaggtg aaaaaaggct atgaagctgt ggaagagatt tttaaattaa
    49621 cagtgaaact tggaggaact ttaagcggag agcatggtat cggactctct aaggcacctt
    49681 ttatgaattt agctttttct gaagccgaaa tgaatttaat gagaaatatt aaaaaagctt
    49741 ttgatccaaa taatatacta aatcctttta aaatgggact ttagaaggtg aaaaattttt
    49801 ttactatttt actaaatttg cgtgataagg aaattttaaa ttatgcagca gcgcttagtt
    49861 tttatactgt attatcttta atacctattt tatttgtatg tttttctgtt tttacgcaaa
    49921 tttccagttt taaagcttat tatgaaaaag caaagcaagt aatttttgct tttttaatac
    49981 caacgcaaca agatgttgtt gctacctaca tcgatacttt tttaaaaaat agtgtaaatt
    50041 tgggtattgt aggtcttatt gctatggcat ttacttcttt agcttttttt tcaggctatg
    50101 attttgtaat caatcgcatt actaaaaatg aacctaaagg actttggcaa agtattagtt
    50161 cttattggac tcttttaact cttgttcctt tggggcttgg gcttagtttt tatatttcag
    50221 gttttatcca acaaacttta gatgattata aaatagggtt taattttttt gaaattttac
    50281 cctttgtaat tatttggggt ttatttttta tatcttattc aagttctgtt cataagggaa
    50341 ctcttaaaag tttagcttta gtatcttttg gagcgggtac tatttggtat ataggaaaaa
    50401 atttatttgt atattacgtg gtatataata aaacatacgc tagcgtttat ggatcttttt
    50461 ctactatttt attctttttt atttggattt atatttcttg gattatttat ctttttgggc
    50521 ttaaactcta ttattttcta aatcacaatc ataatgaagg gaataaaatt cgcaaaaata
    50581 caaagaaaag ctagatattt aaatcgcaca gagattaaag aagcaataag ataacttata
    50641 aaaatccaaa atgggatatg gatattagtt ccataaattt taaatttaaa aaattcatct
    50701 aagataaaat tgagcaaatc tccatagttt ataagatgca aaaataatac taaaggataa
    50761 aatattataa aaattccact caaaataata cctaaaattt gttggtagct tataagtgga
    50821 aaaaaataaa gcacaggtaa aaccatagca aaaaaagtcc aaatattaag caaaataata
    50881 tttataagat tattaaattt atttgcaaaa tgatgcatat ataaaaaaat ataaaaaaca
    50941 cctaaaatag aaaataaaaa tccaatacta aataaaagtc tagggtaaag agaaatgcac
    51001 aataaaatac tacaaaaaag cgtaacgaaa ttaatgattt ttatattttt acacaataga
    51061 taaaaaaccc aaaaagccat aatcaaggag cgcacaaaag aagggacaaa tcctattaaa
    51121 caagcataag ctaaaagtag tgcaaaaatt aaaatactta aatctaaacg taaatttcta
    51181 taaggaaaat atcttttttg gaaaaaacta taaattggag ctaaaataaa gaaaattaaa
    51241 ctaaaaagta agcctatgtg ataaccgcta attgctataa ggtgtgctat accgtagtaa
    51301 tttacatcgt ttctaagctc taaagatatg ggcagtgcaa aaaataaagc accataaaat
    51361 tctttaatct tttcatttgt atgttgattt aagaagtaag atataatggg attgtattct
    51421 ttttctttta atttttcaaa atcataagaa ggtgcgtaaa aacttttact cagatagtct
    51481 ttaaagttaa tattatgggt gataattcta aggcttaaaa attgattctt gcttaaattt
    51541 aaatccttaa aacttgtagt ataaaaagtg aagttttcag tttgtaactt taaaacccag
    51601 tattttttat tttttttatt atattttata tattggtgcg ttaatagagc gttgtctata
    51661 aggtaatgtt tttggttttt aaagttt
//
LOCUS       DAPIWB010000002        50507 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.002, whole genome shotgun sequence.
ACCESSION   DAPIWB010000002 DAPIWB010000000
VERSION     DAPIWB010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 50507)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 50507)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..50507
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.002"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(70..1068)
                     /gene="mnmH"
                     /locus_tag="RJ266_000051"
     CDS             complement(70..1068)
                     /gene="mnmH"
                     /locus_tag="RJ266_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HDV7353845.1"
                     /translation="MLSEVEFVEFQKENFSLLIDARSPREFLHSHLIGALNFYALNDE
                     EYQEIGTIYKKNQALAKAMGASYICQNTAKHILEITQNFRIGEKVGIYCSRGGLRSKS
                     IAVILSELGFRVVRLKGGFKAYRTFVTHYFENEINFDFFALCGNTGCGKTELLEQLPQ
                     AINLEKMANHLGSSFGDILGKQPTQKAFEAELFHNIQNLENFAFIESESRKIGDIILP
                     LKFYEKMQKAFKIYCFCSLENRVRRIQKIYQEKMTPLKFQQCVQKISPYISLNLHQDL
                     LQSYERKEWQKLIVMLLEYYDKTYKKPDKIDLELNTDDILKAKEELLDHFKAQLLF"
     gene            complement(1058..1543)
                     /locus_tag="RJ266_000052"
     CDS             complement(1058..1543)
                     /locus_tag="RJ266_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HDV7353846.1"
                     /translation="MQYLYAPWRSEYFEKEKSICPFCDCANKIKSDEELGVIFRAKHC
                     FGVMNRYPYSAGHFMVIPYIHEEHIENLSDEIWQEMSYFVRLGVKILKEQIHANGVNI
                     GMNLSKDAGAGIAFHCHYHLVPRWSGDTNFITTIGETRVCGTNIEQVYQKLVLAFKNA
                     Q"
     gene            complement(1553..2329)
                     /gene="trpC"
                     /locus_tag="RJ266_000053"
     CDS             complement(1553..2329)
                     /gene="trpC"
                     /locus_tag="RJ266_000053"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HDV7353847.1"
                     /translation="MILDKIFEKTKEDLKERKLKLPYDMLGRSLASNPFFPKDVIKAL
                     KRVEKEVKIIAEVKKASPSKGVIREDFDPLSIALNYEKNKAAAISVLTEPHFFKGSLE
                     YLSLIRRYTQIPLLRKDFIFDEYQILEALVYGADFVLLIAKMLSMKELKKLLEFARHL
                     GLEALVEIHDKEDLSKAIFAGADIIGINHRNLEDFTMDMSLCEKLIPQIPNSKIIIAE
                     SGLENKEFLEHLQNLGVDAFLIGEYFMREKDEGKALKALL"
     gene            complement(2326..3603)
                     /locus_tag="RJ266_000054"
     CDS             complement(2326..3603)
                     /locus_tag="RJ266_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent nuclease subunit B"
                     /protein_id="HDV7353848.1"
                     /translation="MYRYLLFVLAAFFLAACGSSKINVVYPDYTKYKSNDFDLRVMKA
                     YNYEYYKQYKEARDEFLSLYQDYNNTNFLENAFLLSLANNLDRQAELNNLAKPYLNQN
                     DNLKRLSVLYALSSNDINNAQKLMKELLTKKDSDPRNLELYGDILVKKNDLKNATKYY
                     RSAYNQVQNEEILFKLIGIYAILNDTLNIKSVLEFSRKTNGCTLKTCVLLAKIYFDEK
                     NIEALKSIYKELYQLTKNKSFVLALVELLNSQGKTEEALKISLQYDLDDDIKLALYQN
                     LKRFDDAKKMSLTLYHKTKNKEYLLRAAVFEFEAANEAKKITPKVIDSVKEKFEQAID
                     KDSNALYLNYYGYLLIDYDLDVKKGIELVKLALEKDPQNLYYLDSLAWGYYKLGDCKQ
                     AWEILKQTLDDKEFANSDESKAHIKAIKACIKP"
     gene            complement(3576..3950)
                     /locus_tag="RJ266_000055"
     CDS             complement(3576..3950)
                     /locus_tag="RJ266_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HDV7353849.1"
                     /translation="MIFDKNFSYAFDENACEKCGGKCCTGESGNIFASKEELEVLRKH
                     LNLESKEFAEKYLRKVGFKMSFKEVECEDGFACIFFDTQKRNCSIYDFRPKQCRTFPF
                     WEYFKTHQKELEKECIGICYLS"
     gene            complement(3940..4641)
                     /locus_tag="RJ266_000056"
     CDS             complement(3940..4641)
                     /locus_tag="RJ266_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA1(Val) (adenine(37)-N6)-methyltransferase"
                     /protein_id="HDV7353850.1"
                     /translation="MSDLITLAQLSQGYRYNSDSLILADFILKQGIKGAVFDVGAGCG
                     IIGILLKKNIANLSLSLIDIQKENIKLIEKNLKSNKIQGDIFHDDFNQFQIIKKFDFI
                     VCNPPFYRQGAYKSEDQHKAISKFQEFLPLHSFLAKTNSMLKPNGTLYFCYEALALDE
                     ICFILKDMKMKITKLCFVHTHQNKKARLVLIQVKKGSKSPCEILPPFFVYENEILSKQ
                     MQEIHLRFRLKSYDI"
     gene            complement(4647..4796)
                     /locus_tag="RJ266_000057"
     CDS             complement(4647..4796)
                     /locus_tag="RJ266_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7353851.1"
                     /translation="MIKIAFFITFVISFLAAQSPVNFKEDNNITKERNIFKEQSPKRI
                     KIPTH"
     gene            complement(4814..4890)
                     /locus_tag="RJ266_000058"
     tRNA            complement(4814..4890)
                     /locus_tag="RJ266_000058"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4854..4856),aa:Arg,seq:cct)
     gene            complement(4919..6994)
                     /gene="fusA"
                     /locus_tag="RJ266_000059"
     CDS             complement(4919..6994)
                     /gene="fusA"
                     /locus_tag="RJ266_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HDV7353852.1"
                     /translation="MSRSTPLKKVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVH
                     DGAATMDWMEQEKERGITITSAATTCFWKDHQINLIDTPGHVDFTIEVERSMRVLDGA
                     VAVFCSVGGVQPQSETVWRQANKYGVPRIVFVNKMDRIGANFYNVEDQIRNRLKANPV
                     PLQIPIGAEDNFKGVIDLVTMKALVWEDDTKPTDYVEKEIPAELKEKAEEYRTKMIEA
                     VSETSDELMEKYLGGEELSLEEIKTGIKAGCLSLSIVPMLCGTAFKNKGVQPLLDAVV
                     AYLPAPDEVANIKGEYEDGTEVSVKSTDDGEFAGLAFKIMTDPFVGQLTFVRVYRGCL
                     ESGSYAYNSTKDKKERIGRLLKMHSNKREEIKVLYAGEIGAVVGLKDTLTGDTLASEK
                     DKVILERMDFPDPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIIS
                     GMGELHLEIIVDRMLREFKVEAEVGQPQVAYRETIRKTVEQEYKYAKQSGGRGQYGHV
                     FLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAVDKGVQEALQNGVLAGYPVEDVKVTVY
                     DGSYHEVDSSEMAFKLAASMGFKEGARKAGAVILEPMMKVEVETPEDYMGDVIGDLNK
                     RRGQVNSMDERGGNKIITAFCPLAEMFGYSTDLRSQTQGRATYSMEFDHYDEVPKNVA
                     DEIIKKRNG"
     gene            complement(7007..7477)
                     /gene="rpsG"
                     /locus_tag="RJ266_000060"
     CDS             complement(7007..7477)
                     /gene="rpsG"
                     /locus_tag="RJ266_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HDV7353853.1"
                     /translation="MRRRKAPVREVLPDPIYGNKVITKFINSLMYDGKKSTATTIMYG
                     ALEAIDKKGGEKKGIDIFNDAIENIKPLLEVKSRRVGGATYQVPVEVRPARQQALAIR
                     WIISFARKRSERTMIDKLAAELLDAANSKGASFKKKEDTYKMAEANKAFAHYRW"
     gene            complement(7547..7933)
                     /locus_tag="RJ266_000061"
     CDS             complement(7547..7933)
                     /locus_tag="RJ266_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HDV7353854.1"
                     /translation="MPTINQLVRKERKKVLEKSKSPALKNCPQRRGVCTRVYTTTPKK
                     PNSALRKVAKVRLTSGFEVISYIGGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGAL
                     DTAGVAKRTVSRSKYGAKRPKAGAAK"
     gene            complement(8053..12606)
                     /gene="rpoC"
                     /locus_tag="RJ266_000062"
     CDS             complement(8053..12606)
                     /gene="rpoC"
                     /locus_tag="RJ266_000062"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HDV7353855.1"
                     /translation="MSKFKVIEIKEDARPRDFEAFQLRLASPEKIKSWSYGEVKKPET
                     INYRTLKPERDGLFCAKIFGPIRDYECLCGKYKKMRFKGIKCEKCGVEVANSKVRRSR
                     MGHIELVTPVAHIWYVNSLPSRIGTLLGVKMKDLERVLYYEAYIVENPGDAFYDNEST
                     KKVEYCDVLNEEQYQNLMQRYENSGFKARMGGEVVRDLLANLDLVALLNQLKEEMAAT
                     NSEAKKKTIIKRLKVVENFLNSNLNANTDSDEAVPNRPEWMMITNLPVLPPDLRPLVA
                     LDGGKFAVSDVNDLYRRVINRNTRLKKLMELDAPEIIIRNEKRMLQEAVDALFDNGRR
                     ANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPK
                     KMALELFKPHLLAKLEEKGYATTVKQAKKMIENKTNEVWECLEEVVKGHPVMLNRAPT
                     LHKLSIQAFHPVLVEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSQEAIAECKVLMLS
                     SMNILLPASGKSVTVPSQDMVLGIYYLSLEKAGAKGSHKICTGIDEVMMALESKCLDI
                     HASIQTMVDGRKITTTAGRLIVKSILPDFVPENSWNKVLKKKDIAALVDYVYKQGGLE
                     ITASFLDRLKNLGFEYATKAGISISIADIIVPNDKQKAIDEAKKQVREIQNSYNLGLI
                     TSGERYNKIIDIWKSTNNVLSKEMMKLVEKDKEGFNSIYMMADSGARGSAAQISQLAA
                     MRGLMTKPDGSIIETPIISNFREGLNVLEYFISTHGARKGLADTALKTANAGYLTRKL
                     IDVAQNVKITIEDCGTHEGVEINEITADSSIIETLEERILGRVLAEDVIDPITNSVLF
                     AEGTLMDEEKAKILGESGIKSVNIRTPITCKAKKGICAKCYGINLGEGKLVKPGEAVG
                     IISAQSIGEPGTQLTLRTFHSGGTASTDLQDRQVSAQKEGFIRFYNLKTYKNKEGKNI
                     VANRRNAAVLLVEPKIKTPFKGVINIENIHEDVIVSIKDKKQEVKYILRKYDLAKPNE
                     LAGVSGSIDGKLYLPYQSGMQVEENESIVEVIKEGWNVPNRIPFASEILVEDGEPVVQ
                     NIKAGEKGTLKFYILKGDGLDRVKNVKKGDIVKEKGFFVVIADENDREAKRHYIPRES
                     KIEFNDSEKIDDANTIIASAPKKERKVIAEWDAYNNTIIAEIDGVVSFEDIEAGYSAD
                     EQIDEATGKRSLVINEYLPSGVRPTLVIAGKGDKAVRYHLEPKTVIFVHDGDKIAQAD
                     ILAKTPKAAAKSKDITGGLPRVSELFEARKPKNAAVIAEIDGVVRFDKPLRSKERIII
                     QAEDGTSAEYLIDKSKHIQVRDGEFIHAGEKLTDGVVSSHDVLKILGEKALHYYLISE
                     IQQVYRGQGVVISDKHIEVIVSQMLRQVKVVDSGHTKFIEGDLVSRRKFREENERIIR
                     MGGEPAIAEPVLLGVTRAAIGSDSVISAASFQETTKVLTEASIAGKFDYLEDLKENVI
                     LGRMIPVGTGLYGEQNLKLKEQE"
     gene            complement(12599..16735)
                     /gene="rpoB"
                     /locus_tag="RJ266_000063"
     CDS             complement(12599..16735)
                     /gene="rpoB"
                     /locus_tag="RJ266_000063"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HDV7353856.1"
                     /translation="MCDMLDNKLGNRLRVDFSNISKQIEIPNLLQLQKKSFDYFLNLD
                     NGESGIEKVFKSIFPIHDPQNRLSLEYVSSEIGKPKYTIRECMERGLTYSVNLKMKIR
                     LTLHEKDEKTGEKVGVKDIKEQEIYIREIPLMTDRVSFIINGVERVVVNQLHRSPGVI
                     FKEEESSTVANKLVYTAQIIPDRGSWLYFEYDAKDVLYVRINKRRKVPVTMLFRALGY
                     KKQDIIKLFYPIQTIHVKKDKFLTEFNPNDFMDRIEYDIKDEKGKIVHQAGKRLTKKK
                     AEQLIKDGLKWIEYPVEILLNRYLANPIIDKESGEVLFDSLTLLDESKLAKIKEQKSF
                     DIANDLANGVDAAIINSFAQDGETLKLLKQSENIDDENDLAAIRIYKVMRPGEPVVKD
                     AAKAFVNDLFFNPERYDLTKVGRMKMNHKLGLEVPEYVTVLTNEDIIKTAKYLIKVKN
                     GKGHIDDRDHLGNRRIRSIGELLANELHLGLAKMQKAIRDKFTSLNADLDKVMPYDLI
                     NPKMITTTIIEFFTGGQLSQFMDQTNPLSEVTHKRRLSALGEGGLVKERAGFEVRDVH
                     ATHYGRICPVETPEGQNIGLINTLSTYAKVNELGFVEAPYRKVVNGKVTNEVVYLTAT
                     QEEGLFIAPASTKVDAKGNIVEEFVEARQDGETILARREEVQLIDLCSGMVVGVAASL
                     IPFLEHDDANRALMGSNMQRQAVPLLTASAPIVGTGMEQIIARDAWEAVKAKRGGVVE
                     KVDNKSIFILGEDDKGPFIDHYTMEKNLRTNQNTNYIQHPIVKKGDIVKAGQIIADGP
                     SMDQGELAIGKNALIAFMPWNGYNYEDAIVVSERIIREDTFTSVHIYEKEIEARELKD
                     GIEEITKDIPNVKEEDVAHLDESGIAKIGTHIKPGMILVGKVSPKGEVKPTPEERLLR
                     AIFGEKAGHVVNKSLYATASLEGVVVDVKIFTKKGYEKDDRAIKSYDKEKMALEKEHH
                     DRLLMMDREEMLRVCALLSKAPLNSDQKIGDKNYKKGQTADISELEKINRFTLTTLIK
                     AYSKEIQKEYDDLKNHFQNEKKKLKAEHDEKLEILEKDDILPSGVIKLVKVYIATKRK
                     LKVGDKMAGRHGNKGIVSTIVPEVDMPYLPNGKSVDIALNPLGVPSRMNIGQILESHL
                     GLVGLRLGDQIQEIFDRKQKDFLKELRAKMLEICSLPRLANEKEFIKSLSDEELLNYA
                     RDWSKGVKFSTPVFEGVNIEEFSKLFKMAKIDMDGKTELYDGRTGEKIAERVHVGCMY
                     MLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGAAHTLRE
                     MLTIKSDDVEGRFSAYKALTKGENVPATGIPETFFVLTNELKSLALDVEIFDKDEDNE
                     "
     gene            complement(16844..17221)
                     /gene="rplL"
                     /locus_tag="RJ266_000064"
     CDS             complement(16844..17221)
                     /gene="rplL"
                     /locus_tag="RJ266_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HDV7353857.1"
                     /translation="MAISKEDVLEYISNLSVLELSELVKEFEEKFGVSAAPVMIAGGA
                     AAGGAAAAAEEKTEFDIVLTDGGAKKIEVIKIVRALTGLGLKEAKDAVEQTPSTLKEG
                     VAKAEAEEAKKQLEEAGAKVELK"
     gene            complement(17242..17721)
                     /locus_tag="RJ266_000065"
     CDS             complement(17242..17721)
                     /locus_tag="RJ266_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HDV7353858.1"
                     /translation="MTRSEKVEIIAKLEEGFKASEAIVVCNYRGLSTKKLEELRNNAR
                     ENNVKVQIVKNTLANIALNNSGKTGLVLKDTNIYLWGEDQLGVSKVAAKFEENNDKFE
                     IKTAHIEGEVADVAKVKALAKMPSRNELLAMLLQVWNAPITNFTIGLNALKNKKESE"
     gene            complement(17873..18574)
                     /locus_tag="RJ266_000066"
     CDS             complement(17873..18574)
                     /locus_tag="RJ266_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HDV7353859.1"
                     /translation="MAKIAKRLKELSQKIDSNKEYALSDAIDTIKTLKSAKFDETVEI
                     ALKLNVDPRHADQMVRGSVVLPAGTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLVE
                     EIQKGNMNFDVLIATPNLMGLVGKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQ
                     VNFRVDKQGNIHAGLGKVSFSKEQLWDNVSTFVKAINKHKPAAAKGRYIKNAALSLTM
                     SPSVKLETQELLDMK"
     gene            complement(18629..19054)
                     /gene="rplK"
                     /locus_tag="RJ266_000067"
     CDS             complement(18629..19054)
                     /gene="rplK"
                     /locus_tag="RJ266_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HDV7353860.1"
                     /translation="MAKKVVGEIKLQIAATKANPSPPVGPALGQQGVNIMEFCKAFNE
                     RTKDMAGFNIPVVITVYADKSFTFITKQPPATDLIKKAAGISKGTDNPLKNKVGKLTR
                     AQVLEIVDKKIADLNTKDRDQAAKIIAGSARSMGVEIVD"
     gene            complement(19080..19613)
                     /gene="nusG"
                     /locus_tag="RJ266_000068"
     CDS             complement(19080..19613)
                     /gene="nusG"
                     /locus_tag="RJ266_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HDV7353861.1"
                     /translation="MSTHKWYAIQTYAGSEMAVKRAIENLVKDNGIEEQLKEIVVPTE
                     DVIEFKNGKEKISERSLYSGYVFALLDLNTELWHRIQSLPKVGRFIGESKKPTPLTEK
                     DINLILEKVHNRAAPKPKISFEEGENVRITEGPFANFTAIVEEYDMVRGLLKLNVSIF
                     GRSTPVEILYSQVEKII"
     gene            complement(19623..19802)
                     /gene="secE"
                     /locus_tag="RJ266_000069"
     CDS             complement(19623..19802)
                     /gene="secE"
                     /locus_tag="RJ266_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HDV7353862.1"
                     /translation="MEKLITYFKLSKAELRKVIFPLKEQVRNAYITVFVVVAVISLFL
                     ALVDWLMSSIVSAIV"
     gene            complement(19821..19896)
                     /locus_tag="RJ266_000070"
     tRNA            complement(19821..19896)
                     /locus_tag="RJ266_000070"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(19861..19863),aa:Trp,seq:cca)
     gene            complement(19909..20067)
                     /gene="rpmG"
                     /locus_tag="RJ266_000071"
     CDS             complement(19909..20067)
                     /gene="rpmG"
                     /locus_tag="RJ266_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDV7353863.1"
                     /translation="MRIKVGLKCEECGDINYSTYKNSKNTTEKLELKKYCPRLKKHTL
                     HKEVKLKS"
     gene            complement(20120..21319)
                     /gene="tuf"
                     /locus_tag="RJ266_000072"
     CDS             complement(20120..21319)
                     /gene="tuf"
                     /locus_tag="RJ266_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDV7353864.1"
                     /translation="MAKEKFSRNKPHVNIGTIGHVDHGKTTLTAAISAVLSRRGLAEL
                     KDYDNIDNAPEEKERGITIATSHIEYETDNRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKADMVDDAELLELVEMEIRELLSS
                     YDFPGDDTPIISGSALKALEEAKAGQDGEWSAKIMDLMAAVDSYIPTPTRDTEKDFLM
                     PIEDVFSISGRGTVVTGRIEKGVVKVGDTIEIVGIKDTQTTTVTGVEMFRKEMDQGEA
                     GDNVGVLLRGTKKEEVIRGMVLAKPKSITPHTDFEAEVYILNKDEGGRHTPFFNNYRP
                     QFYVRTTDVTGSIKLADGVEMVMPGENVRITVSLIAPVALEEGTRFAIREGGKTVGSG
                     VVSKIIK"
     gene            complement(21387..21461)
                     /locus_tag="RJ266_000073"
     tRNA            complement(21387..21461)
                     /locus_tag="RJ266_000073"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(21427..21429),aa:Thr,seq:ggt)
     gene            complement(21566..21642)
                     /locus_tag="RJ266_000074"
     tRNA            complement(21566..21642)
                     /locus_tag="RJ266_000074"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(21606..21608),aa:Gly,seq:tcc)
     gene            complement(21649..21734)
                     /locus_tag="RJ266_000075"
     tRNA            complement(21649..21734)
                     /locus_tag="RJ266_000075"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(21698..21700),aa:Tyr,seq:gta)
     gene            complement(21784..21859)
                     /locus_tag="RJ266_000076"
     tRNA            complement(21784..21859)
                     /locus_tag="RJ266_000076"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(21824..21826),aa:Thr,seq:tgt)
     gene            complement(21974..22711)
                     /locus_tag="RJ266_000077"
     CDS             complement(21974..22711)
                     /locus_tag="RJ266_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002907699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDV7353865.1"
                     /translation="MSILKIENLQKYYGSHHALKDINLEVKAKEVVVILGPSGCGKST
                     LLRCINGLEEIASGNIYIDNEKIDKDFKEWPRMRQKVGMVFQSYELFEHLSVEENILL
                     GPMKVQKRKKDEVLKEAKIWLEKVGLLHKIHAYPRELSGGQKQRIAIVRSLCMNPELM
                     LFDEVTAALDPEIVREVLEVMLNLAKEGMTMLIVTHEMGFAKAVADKIIFMDEGKIIE
                     ENDPKSFFENPKSERAKKFLNLFDYHK"
     gene            complement(22713..23369)
                     /locus_tag="RJ266_000078"
     CDS             complement(22713..23369)
                     /locus_tag="RJ266_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDV7353866.1"
                     /translation="MLELLNTDTLLRLWQGLFVTLEISFISIIITSIGGLFLGILMSF
                     KNTYIYAFCRLGLEFVRVMPLLVWFFVVYFGFPRWFGWDLSSVSVAIIVFSIWGCFEM
                     MDLVRVSLQSIPKHQYESASSLGLNTVQSFAYVIIPQAMRRLTPMSMNLLTRMIKSTT
                     FAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSRKLEKKWS
                     "
     gene            complement(23362..24063)
                     /locus_tag="RJ266_000079"
     CDS             complement(23362..24063)
                     /locus_tag="RJ266_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDV7353867.1"
                     /translation="MDFDFILAQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYF
                     KIKILENICKLYIEFSRNTPLLIQLFFLYYALPKFNIHLEQIPPLNLICLSVEETLRP
                     SFACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSLGFSKFGNLRYVILPQALAI
                     SMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKTDELLFLLFMGYLCIILP
                     LSFILLKFEKRLLYA"
     gene            complement(24079..24675)
                     /gene="nssR"
                     /locus_tag="RJ266_000080"
     CDS             complement(24079..24675)
                     /gene="nssR"
                     /locus_tag="RJ266_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrosative stress-sensitive transcriptional
                     regulator NssR"
                     /protein_id="HDV7353868.1"
                     /translation="MKDYLELLSSVGKLKKFQKNSILFYEGEEAKKFFILLKGKIRIY
                     KSTASDKEITLHYFNPPNFIAEMPAFKKLNYPANAIFEEEGEILEIDFINFQNLCSEN
                     KEFNFLLISSLFDKIKILEKKLSQNALDLRTRLLKYLLENEKNLDTISQKQIAIDLNV
                     RAQSLSRVLKELKISELIDTKKGRIEILNKDMIMKELW"
     gene            24770..25153
                     /gene="ctb"
                     /locus_tag="RJ266_000081"
     CDS             24770..25153
                     /gene="ctb"
                     /locus_tag="RJ266_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="truncated hemoglobin Ctb"
                     /protein_id="HDV7353869.1"
                     /translation="MKFETINQESIAKLMEIFYEKVRKDKDLGPIFNNAIGTSDEEWK
                     EHKAKIGNFWAGMLLGEGDYNGQPLKKHLDLPPFPQEFFEVWLGLFEESLNIVYNEEM
                     KTVILQRAQMIASHFQNMLYKYGGH"
     gene            complement(25150..26973)
                     /gene="recG"
                     /locus_tag="RJ266_000082"
     CDS             complement(25150..26973)
                     /gene="recG"
                     /locus_tag="RJ266_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HDV7353870.1"
                     /translation="MKIKESDFEFFKKLKIKSAIDLALLLPKKIENLNPSKNPKENEI
                     CTQKITIKSVSSRKNQLFGLGFCEEWQENISFVFFHPRAWHFGICKVGKGLIFNAKLS
                     RFNHTWQFNNPKILTSFEGFSPKYQILGLKDAKIAAFIHKYLNYENLQESGIGDKYIH
                     FLLNLHAYDEKSFFMFENLQNFSKDLKYIEIYNFLKRLKAKKTHFKAHQINVFNIANW
                     LKDLPFSLTKDQLNALKDIEKDLHSKEARRRVIMGDVGCGKTLVLLGAALMVYPKQAI
                     LMAPTSILAHQLYEEAKKFLPDFMNILFIKGGKKEKDLEQNIQKANLIIGTHALIHLE
                     SHNAVLVMIDEQHRFGAAQREKIHSLSKQEFAPHFIQFSATPIPRTLSMIQSELLNFS
                     FIKQMPFKKDITTYCIQNEGFSKLSEKIKEEIAKNHQIIIIYPLVSASDNIPYLSLEQ
                     AKEYWQSHYEKVFVTHGKDKQKDEILERFRDEGNILLSTTVVEVGISLPRLSMIVIVG
                     AERLGLATLHQLRGRVGRVGLKSTCYLYTKLKEIPSRLKEFASTLDGFKIAELDLKNR
                     LSGDLLDGFMQHGNEFKFFDFSTDEEILQKVKKDLAKKLPN"
     gene            complement(26963..28183)
                     /locus_tag="RJ266_000083"
     CDS             complement(26963..28183)
                     /locus_tag="RJ266_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDV7353871.1"
                     /translation="MQYLESRGIKIPFIFEKNSDFPIVVLKLVFRNCARSYDEIAGLA
                     KMFSRILNEGVDDKFFKDLEFRAINLEASSGFESLEINLSCLKENFDFALKSLEKLLL
                     KPRIEEKILQKLKINALGELASKNSDFDYLAKNLLNAQIFKCKEFQSSNDGDEKSIEI
                     LSLKDLQNFYKNFIHLSDLVVILGGDLEEKQAKEDLLKLLSKLQIGKKNTPKKYELSK
                     NIKDEILLRPESEQAYIYFATPFFADFKDKDLYLAKIALFVLGQGGFGSRIMEEIRVK
                     RGLAYSAYAMLDMNMSFSRVFGYLQTKNESAKEAKKIVKELFEDFIKNGMTQNELDQA
                     KNFLIGSTPLRYEGLSNRLSTAFNEFYQGLNLGYYKEELKLMEKVKLETINAYIKKHQ
                     ELLNISFASIQNEN"
     gene            complement(28183..29229)
                     /locus_tag="RJ266_000084"
     CDS             complement(28183..29229)
                     /locus_tag="RJ266_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehypoxanthine futalosine cyclase"
                     /protein_id="HDV7353872.1"
                     /translation="MKRLDKKEALDLLHHASLTELGEMAYKRKLELHPEKITTFVVDR
                     NINYTNVCCIDCSFCAFYRHHKEDDAYILSFEEIGKKIEELEAIGGTQILFQGGVHPK
                     LKIEWYEELVSWIKEHYPNITVHGFSAVEIAYIAKASKISITEVLKRLQAKGLFSIPG
                     AGAEVLSDRVRDIIAPNKCDTATWLEVHRQAHKIGMKSTATMMFGTVENDEEIIDHFE
                     HLRKLQDETGGFRAFILWSFQSDNTALIQKHPEIMKQSSNKYLRLLALARLYLDNFKN
                     LQSSWVTQGSLIGQLALKFGANDLGSTMMEENVVSAAGASYRMNQDEMIRLIRSLGEN
                     PAKRNTAYEILERF"
     gene            29305..30492
                     /locus_tag="RJ266_000085"
     CDS             29305..30492
                     /locus_tag="RJ266_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7353873.1"
                     /translation="MNYIELLKNNKNIRILASVQFIVYFGAWFSQTGVFTLLVELNAP
                     TWATATSAMLAFLPGVLLAPINGVIVEKNKPKKLLLSMISIELISIFCLIFVTSLSML
                     WLLFILIFIRLCVASIYFQAEMSLLAKILTPQELKLANEMHSVIWAISYTAGMASAGI
                     FIYFLGVKTAFLFDCMLILIGISFLVRLSIPDFHHKTQSRFFTMIKEGFFYVLNNKII
                     FHLILLHAFIGLTAYETLVTLLAQHQYKEVLSAALVIGFLNAVRACSLAIGPMVLSKF
                     INNKNLFYMYLGQGLGIILWALTQFNFYISFLGLIGAGFFTSALWAYTYTMIQKNADK
                     EYHGRVIAYTDMIYLSFSAIISMLMGFLFEIGLSLKLITGLLGMIFIFAAFYWKWFYK
                     KYL"
     gene            complement(30508..31596)
                     /gene="nusA"
                     /locus_tag="RJ266_000086"
     CDS             complement(30508..31596)
                     /gene="nusA"
                     /locus_tag="RJ266_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HDV7353874.1"
                     /translation="MEKIADIIESIANEKNLNLENVREKVATALINTAKRIYGQEYEF
                     FVDPKNLNLYQKITIVADNDERLQNKSESFIALSKAKSEAPDVEIGDELTYECSLENL
                     GRTAVNTLHKELEYHIQKLLEQTIFEKYKNKVGQMVFGTVVRVDNEENTFIEIDELRA
                     FLPRKNRIKGEKFKIGDVVKAVIRRVYTDKGIKIELSRTSPKFLECLLEAEVPEIKDG
                     YVNIIGCARIPGERAKIILQANGANIDPVGATVGVKGVRINAVSKELHNENIDCIEFT
                     NESEILISRALAPAIVNSVKIEDKKAIVSLNSEQKSKAIGKNGINIRLASMLSGYEIE
                     LNELSSSQLNNAISNEEAMKNLQDLFKI"
     gene            31723..31965
                     /locus_tag="RJ266_000087"
     CDS             31723..31965
                     /locus_tag="RJ266_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7353875.1"
                     /translation="MELKLARTLINEKPKNISLEKIEEAIEKEGQKFFYFDKDNTHKQ
                     LIALVNHFEKKGVSIYHRTVKYGLDDNDFMYEVHIL"
     gene            31962..33263
                     /gene="miaB"
                     /locus_tag="RJ266_000088"
     CDS             31962..33263
                     /gene="miaB"
                     /locus_tag="RJ266_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HDV7353876.1"
                     /translation="MSAKKLFIQTLGCAMNVRDSEHMIAELTQKGNYALTEDIKEADL
                     ILINTCSVREKPVHKLFSEVGGFEKVKKEGAKIGVCGCTASHLGNEIFKRAPYVDFVL
                     GARNISKITQAIKTPKFMGVDIDYDESEFAFADFRNSIYKSYINISIGCDKHCTYCIV
                     PHTRGDEISIPFNIIYKEAQKAIEKGAKEIFLLGQNVNNYGKRFRNEHKKMDFSDLLE
                     ELSTIEGLERIRFTSPHPLHMDDKFLEVFANNPKVCKSMHMPLQSGSSEILKAMKRGY
                     TKEWYLNRALKLRELCPNVSISTDIIVAFPGESEKDFKETMDVLEKVRFEQIFSFKYS
                     KRPLTKAATMPNQIDEETASRRLSTLQNRHSEILDEIVKKQENKTFKVLFEELRVGNS
                     IAGRTDNNFLVQVEGSEELLGQFKEVKITNAKRMVLYGEIV"
     gene            33247..33876
                     /locus_tag="RJ266_000089"
     CDS             33247..33876
                     /locus_tag="RJ266_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HDV7353877.1"
                     /translation="MGKSFKIHCLTYIIFILQWLIFLSCKKHYKGEKVDRKAGVILFW
                     HGKLALMPFAFRHYRQKNKKAYVMISHHKDGEQIAKIIKLFGLDTVRGSTSRGASSAL
                     RAAFKVLEQNDDIVITPDGPRGPYHSISDGSIILAQKKELKIRILNYEANRFWKFKSW
                     DKMILPKPFSKITYSLSEPLDILSLDKEKAKEFLMKQFDKISLADQFKE"
     gene            33878..34837
                     /locus_tag="RJ266_000090"
     CDS             33878..34837
                     /locus_tag="RJ266_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="clan AA aspartic protease"
                     /protein_id="HDV7353878.1"
                     /translation="MLFLLKKIFPQLFISIILEDKKNIVKASIYRGNKLISSNEKTFD
                     KSENLLEYIKNLSKHFLFYHTALFLDAKEQGLIPSTNIQDCEHFNIRKISLQHILLNN
                     ALVYTATEHVEYYSELFEEYRGLDFLYSPFALLYYNMQKEKQPDDQILLYGFKQGYLL
                     AIIVAKGNTILYGDFKIFEQELGLELELPSEDNQEIENNNDDTEVTLDNFNEALNNKF
                     DLLDQENNLETLDNNDNFNLDELNQFSNDMELCRYIITSIEKFYNDDKYAGVFINGIL
                     LYSESDININAIDFLESETFLEIKTKQINTLDLMIELMRKEVK"
     gene            34834..35361
                     /locus_tag="RJ266_000091"
     CDS             34834..35361
                     /locus_tag="RJ266_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7353879.1"
                     /translation="MTYSFIQPRKKPIFTLFDKIWLGLFGFSILFILLVYFTYTIKIA
                     LINSSIDDEKQQVIVLQNQTKQNEMLYEILFDQSQIAKNFNTQNQIVKESLRNLFDII
                     VKTDNITLESVEQDEYSLKLIGVTPTREMFTLLLETPLKSIFDQSYTTYYRLDNGWYR
                     FVSISKQIPGVADER"
     gene            35351..35869
                     /locus_tag="RJ266_000092"
     CDS             35351..35869
                     /locus_tag="RJ266_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7353880.1"
                     /translation="MKDKSLEEIDLLKLIICALSFISVCTALILFLLLPTLKNYKQAN
                     LRENSQLAILKAAKSKFDFSEDKISTLRSENNKSLEQFEQNFNIGNFNIFLQKYFQNV
                     KIQETKPEKQEKYLKNRLAIKATMNNPRRLYDFIDALKNYNNLIKLDYPLNLKAGEQG
                     ISIDLTLKVYSS"
     gene            complement(35861..37153)
                     /gene="thiC"
                     /locus_tag="RJ266_000093"
     CDS             complement(35861..37153)
                     /gene="thiC"
                     /locus_tag="RJ266_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HDV7353881.1"
                     /translation="MKTQMNYAKEGIFTKEMQIVAQKENLSKDFLLENIACGKIIIPA
                     NINHKSLDPNGIGFGLRTKVNVNLGVSNDCVDYSEEMKKVELAHKFDIEAIMDLSNYG
                     KTSRFRDELVNVSKAMIGTVPVYDAVGFLEKDLKQIGAKDFLDVVYHHAKSGVDFMTI
                     HAGVNSRAAHIFKQSKRLTNIVSRGGSVLYAWMMMKDAENPFFEYYDDLLDICLKYDV
                     TLSLGDALRPGSTHDASDAAQISELIELSLLTQRAWDVGVQVMIEGPGHMAINEIEAN
                     MQLEKRLCKGAPFYVLGPLVTDIGAGYDHISGAIGGAVAAASGADMLCYVTPAEHLRL
                     PNLEDVREGIVATKIAAHAGDIAKLPKERARDDEMSKARQEIDWEKMFKLAIDGEKAK
                     KMFNERRPDDLNSCSMCGKMCAMNTMNQILKGEDVSLA"
     regulatory      complement(37210..37314)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(37328..38098)
                     /locus_tag="RJ266_000094"
     CDS             complement(37328..38098)
                     /locus_tag="RJ266_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020246882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HDV7353882.1"
                     /translation="MSLQQIDQIISILNKQSKPYDWVMQEFAKVEELKNFDLDLETFE
                     LLGLGLTLNKDNIFILKTRTTKIKDEIFCIVDIESTGGVSKGEILEIGAVKIQNSKEI
                     GRFQSFVKVKEIPENITELTGITYEMVENAPSLTKVLSDFRLFLKDSIFVAHNVRFDY
                     SFISKALNECGFGILLNRRICTIEFAQCCIESPKYKLEVLKEFLGVENTHHRALDDAL
                     AAAEIFKYCLGKLPYHIKTTEELINFTKTATHKAKINI"
     gene            complement(38095..38742)
                     /gene="rpe"
                     /locus_tag="RJ266_000095"
     CDS             complement(38095..38742)
                     /gene="rpe"
                     /locus_tag="RJ266_000095"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HDV7353883.1"
                     /translation="MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLT
                     FGPCVIEKISTISKLPLDVHLMVKDVSKFIDLFIPLKPKFISFHMESEVHPIRLCEYI
                     RSQGIHPAIVLNPHTPIDSIKHMLEFVDMVLLMSVNPGFGGQKFLPLVHEKIKELRQM
                     IDKKNAKVFIEVDGGVNGLNASDLEESGADILVAGSYIFSSNDYKTAISSLKLEF"
     gene            38882..39076
                     /locus_tag="RJ266_000096"
     CDS             38882..39076
                     /locus_tag="RJ266_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HDV7353884.1"
                     /translation="MARVCQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRVTLEDGT
                     TRKMRIAASTLRTLKKQNSK"
     gene            39261..39476
                     /locus_tag="RJ266_000097"
     CDS             39261..39476
                     /locus_tag="RJ266_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HDV7353885.1"
                     /translation="MLHEYRELMSELKGKDAHFDKLFDRHNELDDMIKDAEEGRTSLS
                     SMEISTLKKEKLHVKDELSQYLANYKK"
     gene            39486..40583
                     /locus_tag="RJ266_000098"
     CDS             39486..40583
                     /locus_tag="RJ266_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CZB domain-containing protein"
                     /protein_id="HDV7353886.1"
                     /translation="MFGSKINHSDLQKLEEENKNLTHKIEKFQSENLELKNKITSLEQ
                     AALESKLKTDLLNVLLTGVLKNITIVQGDMLENVNKAEVISSYSKTSLAEMDKLNHIA
                     NSINASLGNITESANKTRDVAGTLHRSVDEITNVINLIKDVSDQTNLLALNAAIEAAR
                     AGEHGRGFAVVADEVRKLAEKTQKATTEVEMNINLLKQNANEMYTQSEQVEKISIDSN
                     AHIMSFSEKFTHLVNEAHSTNSNAVGIASEAFVSLAKLDHIAFKLNGYKEIFSKSGKQ
                     LADHTSCRLGKWLASTGKERFGQNKSFLKINEPHEKVHENMNNAITIANTEDISKDIT
                     QHSIINKCEVAENASLDLFNVFKEMLDESDH"
     gene            complement(40615..41211)
                     /locus_tag="RJ266_000099"
     CDS             complement(40615..41211)
                     /locus_tag="RJ266_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HDV7353887.1"
                     /translation="MAFKNLKELSFEKSNYIKPKRFAYESNGRLCTWDFIESKDSVSV
                     LLYHKELESFIFVRQFRIPLWYHQMHDKDYVKDDNMGYTIELCSGLVDKKLSLEEIAK
                     EECIEELGYAPKNLEKIGDFYTGFGSGVSKQSFYFAEVDEKDKISSGGGVDDEEIEAV
                     YVKVQDFEKKCKNMIRTPLLDFAYMWFLKEKWGKLKII"
     gene            complement(41294..43348)
                     /locus_tag="RJ266_000100"
     CDS             complement(41294..43348)
                     /locus_tag="RJ266_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006655032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDV7353888.1"
                     /translation="MKFKKSLLCFLILSGALLKAEEKYQLNDVVVSASGFEQDLVDAP
                     ASISIITKEELEKKPIKDIGEAIGDIPGVDVTMNKTGTYDFSIRGFGSSYTLVLIDGK
                     RQSVANGFYDNGFSGSESGYLPPLNMIERIEVIRGPASTLYGSDAVGGVINIITKKNP
                     DKIEANIEFNTLLQQHSNHYGNAGGFNAYVATPLIEDTLSISARLKYYDKAASDLKWP
                     TPVWDSSQQRPDNYQIASHSPGAFTSLGFGSRLNWTVDDKNNIYFDIERYINEISVNS
                     TSSRAIKSERQLFKDNVVLNHDGNYDFGSTNSYLQYGSTKDKELHSQIWVGEGKVVLP
                     WNLGQYGNLVNTFGARIDYEMLKNDQASAGSQIRGKNLDQTTVALYGENEYFITDDLI
                     FTTGLRYIYSDLFDSEFTPRVYLVYRLNDNIAFKGGVSKGYKTPAAKQLTNGYYNYAN
                     NNAYFGNPDLKPEESINYELGVDFRVFDFAHYSITGFITDFTNQISSEDLTGMQNDIN
                     CSKGIVCKRPINLGKTQTKGIEFAFNTKTYNGFSLNSSYTFMDNRYKDGQKNWFGGDR
                     IENLPRHIAMLKLNYERGKFSSYIKTRARLDTIAKAKGGGNRSLPWQKYKPFYIVDLG
                     INYKINKQSSLSFAVQNLFDKNFFDPQVTRWGGANPAGYANRYQDYTEGRSFWLSYKY
                     DF"
     gene            complement(43500..44438)
                     /locus_tag="RJ266_000101"
     CDS             complement(43500..44438)
                     /locus_tag="RJ266_000101"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HDV7353889.1"
                     /translation="MASYLDFEKNIQQIDEDIVNAQIKGDTEAVSILKKNLEKEISKT
                     YKNLSDFQRLQLARHPDRPYALDYIELILNDAHEIHGDRAFRDDPAIVCFMGYLGEKK
                     IIVIGEQKGRGTKDKIARNFGMPHPEGYRKALRVARLAEKFQIPILFLIDTPGAYPGI
                     GAEERGQSEAIARNLYELSDLKIPTIAIVIGEGGSGGALAIGVADRLAMMKNSVFSVI
                     SPEGCAAILWNDPAKSEAATKAMKVTADDLKSQGLIDDVIDEPTNGAHRNKEAAAVAI
                     ADYVKKSLNELENIDVRELSANRMQKILKLGAYQEA"
     gene            complement(44440..45654)
                     /locus_tag="RJ266_000102"
     CDS             complement(44440..45654)
                     /locus_tag="RJ266_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HDV7353890.1"
                     /translation="MKRVVVTGIGMINALGLDKESSFKAICNGESGVNKITLFDATDF
                     PVQIAAEVKNFDPLEVVDGKEVKKIDRFIQLGIKAAREAMQDAGFNEELDKEEFGIVS
                     AAGIGGLPNIEKNSIICSERGPRKISPFFIPSALVNMLGGLISIEHGLKGPNISCVTA
                     CAAGTHAIGEAYKSIALGNAKKMLVIGAEAAICPVGIGGFASMKALSTRNEDPQHASR
                     PFDKERDGFVMGEGAGALVFEEYEEAKKRGATIYAELIGFGESADAHHITSPTLDGPL
                     RAMKKALNMAGNPKVDYINAHGTSTPVNDKNETAAIKELFGNNIPLISSTKGQTGHCL
                     GAAGAIEAVVSVMALRDGVVPPTINQLVKDDECDLDYVPNISRKVDLKVVMSNSFGFG
                     GTNGCVVFKKVD"
     gene            complement(45680..45913)
                     /gene="acpP"
                     /locus_tag="RJ266_000103"
     CDS             complement(45680..45913)
                     /gene="acpP"
                     /locus_tag="RJ266_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDV7353891.1"
                     /translation="MATFDDVKAVVVEQLSIDADAVKMESKIIEDLGADSLDVVELIM
                     ALEEKFEVEIPDSDAEKLIKIEDVVNYIDNLKK"
     gene            46023..46691
                     /gene="tenA"
                     /locus_tag="RJ266_000104"
     CDS             46023..46691
                     /gene="tenA"
                     /locus_tag="RJ266_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiaminase II"
                     /protein_id="HDV7353892.1"
                     /translation="MMLFSNLIKENQKIWNAYLHHDFVKKLEDKSLKQENFLFYLKQD
                     YIYLLNYAKCYARLALNSNTAKELRFAMKFQNYIVEGEMELHRAILSLGINADELDAK
                     DESLVNIAYSRYMLSVGENGDFLDMLVALSACAIGYAKIGAEIINRLKNENLKDHPYK
                     EWILTYGSENFQNEAKEFEDFVNSYTSSVSAQKFQKLSEIFHTVTRLEVAFWEHSLRM
                     ELNL"
     gene            complement(46715..47572)
                     /locus_tag="RJ266_000105"
     CDS             complement(46715..47572)
                     /locus_tag="RJ266_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoB--CoM heterodisulfide reductase iron-sulfur
                     subunit B family protein"
                     /protein_id="HDV7353893.1"
                     /translation="MQKEYAFFPGCVLSQAAKESKISLEAIAPILGWKLNEIKGWSCC
                     GASQAQCVDPIATLVANARNIALAEEMKMPMLTTCSTCMLTLTKTKNTLDKGAKERIN
                     IFLAQGGMKYQGSTPITSLLWELYEDLDNLKSKVKKPLSNLKVALFYGCHSLRPEDAF
                     GKKESSTNPKSFESVVEVLGAKIVPFEKRLDCCGFHASYPAEKSVKKMSSQIVNNASE
                     NQADCVVTPCPLCQMQLDIYQERFQDYTNSKARLPIIHLSQLVGLALGLSKEMVGLDY
                     NIIDASKIA"
     gene            complement(47576..48541)
                     /locus_tag="RJ266_000106"
     CDS             complement(47576..48541)
                     /locus_tag="RJ266_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HDV7353894.1"
                     /translation="MKIIIDRFNGKEKYEQSYDIDDKDIQGKTLLSLLLFIKKTKDIT
                     LNFTASCQSAICGACAVRVNGHSYLACDTKMQDLLKEYDNPSSIRISPLGNFRVISDL
                     IVDWEPSIENLRKIRPAMVAKNEFSAEKGCKQSQEEFDRISKQWDCILCGSCASECNK
                     LEADSSDYMQPFVFTHAWRAAADSRGKDPMLHVKPSVMNGLWLCVHCQECADRCPKGI
                     SSVSDIANLRVMAIKKGLNEGLGPDHAEAFYKDLVEGSGRLNEIYLALRSEGVIGSMG
                     KTDIAFKLMCAGKMNPMHVFGEDEIEGHKDLVKMIKAAQEAAVKE"
     gene            complement(48538..50373)
                     /locus_tag="RJ266_000107"
     CDS             complement(48538..50373)
                     /locus_tag="RJ266_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HDV7353895.1"
                     /translation="MGEFSRRDFIKTACISVGALVASSSGVYALDDSSKMDKDTNLPS
                     CDVLVIGSGGAGLRAAAAVRKENPKLSVVVATKMMPSRNATCMAEGGINGVTDFSNGD
                     SYKLHAYDTIKGGAYLVDQEAALKFCELAGKAIFNMDFIGTLFSRNEQGGVAQRLMGG
                     ASKKRCNYSADKTGHILMHSCLDDAISSGVKFLMDHELLDIGVVDGKCEGVVLRDIQS
                     GGIYPVLCKALVIATGGYTRIFYNRTSTPFIATGDGVAAALRAGLGFEDPEMIQFHPT
                     GVANGGTLITEAARGEGGYLLNNRGERFMKNYHEKMELAPRDVVARAIETEIREGRGY
                     GEGLGAYVLCDVRHLGKEKILKDLPKIRHTAMLFENIDLVDTPVPIRSTAHYSMGGIE
                     VAKFEDMSTKIAGIYVGGEASCISIHGANRLGGNSLADAVVTGYLAGIGATNYAKDAS
                     FGKGAKTHELAQKWQARFKEITNNGGNGQEMYELREELGSQNWDNMGIFRTQEKLDLL
                     AKNLEDIQARYEKIRIPNPNEVMNTAFTDYVELGNLILLSRCACLAARNRLESRGAHT
                     REDYPKRDDKNFLKHSIVNLENDELKLSYKDVVVTEFSLDGRRVQ"
BASE COUNT        16651 a         9588 c         6660 g        17608 t
ORIGIN      
        1 acaaagataa aaaggattat tacaagatga tgaagaaaaa atttgattat ttaataaaat
       61 tatctaatat taaaaaagta attgtgcttt aaaatgatct aaaagctctt ctttagcttt
      121 taaaatatca tcagtattta actcaagatc aatcttatct ggttttttat aagttttatc
      181 ataatactcc aaaagcataa caataagctt ttgccattct tttctctcat aactttgaag
      241 caaatcttgg tgtaaattta agctgatata aggactgatt ttttgcacac attgttgaaa
      301 tttcaaagga gtcatttttt cttgataaat tttttgtatt cttctaacgc gattttccaa
      361 agaacaaaaa caataaattt taaaagcctt ttgcattttt tcataaaatt tcaaaggtaa
      421 gataatatcc cctattttgc gactttcgct ttctatgaaa gcaaaatttt ctaaattttg
      481 aatattgtga aaaagttctg cttcaaaagc tttttgcgta ggttgttttc ctaaaatatc
      541 accaaaagac gagcctaaat gatttgccat tttttctaaa tttatagctt gtgggagttg
      601 ttctaaaagc tctgtttttc cacaacctgt attaccacaa agagcaaaaa aatcaaaatt
      661 tatttcattt tcgaaataat gcgttacaaa agttctataa gctttaaacc caccttttaa
      721 acgcaccacc ctaaagccaa gctcacttaa aatcactgcg atagactttg aacgcaaacc
      781 cccacgagaa caataaatcc ccaccttttc tcctatgcga aaattttgag tgatttctaa
      841 tatatgctta gcggtatttt gacaaatata actcgcaccc atagccttag ctaaagcttg
      901 atttttctta taaattgttc ctatttcttg atattcttca tcattgagtg cataaaaatt
      961 taaagctcct atcaagtgag aatgcaaaaa ttctctaggg cttcttgcat cgattaaaag
     1021 agagaaattt tctttttgaa actctacaaa ttcaacttca ctgagcattt ttaaaagcca
     1081 aaacaagttt ttgataaact tgctctatat tagtgccaca aaccctagtt tctcctatgg
     1141 ttgtgataaa atttgtatct cctgaccagc gtggcactag atgataatga caatgaaaag
     1201 ctatgccagc tcctgcatcc ttgcttaaat tcataccgat attcactcca tttgcatgaa
     1261 tttgctcttt taaaattttt acccccaaac gcacaaaata actcatttct tgccaaattt
     1321 catcacttaa attttctata tgctcttcat gtatataagg aatcaccata aaatgccctg
     1381 cagaataagg atagcggttc atcactccaa aacaatgctt tgctctaaaa atcacgccta
     1441 attcttcatc gcttttgatc ttattagcac aatcacaaaa tggacaaatg cttttttctt
     1501 tttcaaaata ctcactccgc catggtgcat acaaatactg cattttccct ccttaaagca
     1561 aagcttttaa agcctttcct tcatcttttt cgcgcataaa atattcgccg attaaaaaag
     1621 catcaacgcc taaattttgc aaatgctcta aaaattcttt attttctaaa ccactttctg
     1681 cgatgatgat ttttgaattt gggatttgtg ggataagttt ttcgcacaaa ctcatatcca
     1741 tagtaaaatc ctctaaatta cgatgattga taccaatgat atccgctcca gcaaaaatag
     1801 ccttactcaa atcctcttta tcatgaattt caaccaaagc ctcaagacct aaatgtcttg
     1861 caaactcaag cagtttttta agctctttca tgcttagcat tttagcgatt aataatacaa
     1921 aatccgcccc ataaaccaaa gcttctaaaa tttgatactc atcaaagata aaatcttttc
     1981 taagtaaagg aatttgcgta taacggcgta taagacttag gtattctaaa gaacctttaa
     2041 aaaaatgcgg ctcagttaaa acagaaatcg ccgcagcttt gttcttctca taatttaaag
     2101 cgatactcaa aggatcaaag tcttctctaa tgactccctt gctagggctt gcttttttta
     2161 cttctgctat gattttaact tctttttcta ctctttttaa agccttaatc acatcttttg
     2221 gaaagaaagg atttgaagct aaagaacgcc ctagcatatc ataaggaagt tttagtttgc
     2281 gttcttttaa atcttctttt gttttttcaa aaattttatc caatatcatg gttttataca
     2341 cgcctttatc gcttttatat gagctttgct ctcatcagaa tttgcaaatt ctttatcatc
     2401 taatgtttgt tttaaaattt cccatgcttg cttacaatcg cctagtttat aataccccca
     2461 agctaaagaa tctaaataat acaaattctg tggatctttt tctaaggcaa gtttcacaag
     2521 ctctatacct tttttaacat ctaaatcata atctataagc aaatatccat agtagtttaa
     2581 atacaaagca ttgctatctt tatcgatagc ctgttcgaat ttttctttta cagaatcaat
     2641 tacttttgga gtgatttttt tagcttcatt tgcagcttca aattcaaaaa ctgccgctcg
     2701 tagaagatat tctttatttt ttgttttatg ataaagagtt aaactcattt ttttagcatc
     2761 atcaaagcgt tttaaattct gatacaaagc gagtttaatg tcatcatcta aatcatactg
     2821 caaagaaatt tttaaagctt cttctgtttt gccttgagaa tttaaaagct caactaaagc
     2881 caatacaaaa cttttatttt tggtaagttg ataaagctct ttatatatac tttttaaagc
     2941 ttcgatattt ttttcatcaa aataaatttt agcaagcaag acgcaagttt tgagagtgca
     3001 accattggtt tttcttgaaa attctaatac acttttaata tttaaagtat cattcaaaat
     3061 cgcataaatt cctatgagtt taaataaaat ttcttcattt tgcacttgat tataagcaga
     3121 tctatagtat tttgtagcat tttttaaatc atttttttta accaaaatat caccataaag
     3181 ctctaaattt ctaggatcgc tatccttttt tgttaaaagc tctttcataa gtttttgagc
     3241 attgttaata tcatttgaac ttaaagcata aagaacacta agccgcttaa gattgtcatt
     3301 ttgatttaaa taaggctttg ctagattatt taactctgct tgcctgtcaa gattgtttgc
     3361 taaagaaagt aaaaatgcat tttctaaaaa attagtatta ttataatctt gataaagact
     3421 taaaaattca tctctggctt ctttgtattg tttataatac tcataattat aagccttcat
     3481 aacccttaaa tcaaaatcat tgcttttata ttttgtataa tcaggataaa caacattgat
     3541 ttttgaactt ccacaagctg ccaaaaaaaa ggctgctaag acaaataaca aatacctata
     3601 cattcttttt ctaattcctt ttgatgtgtt ttaaaatatt cccaaaatgg aaaagttcta
     3661 cattgttttg gacgaaaatc gtagatacta caatttcttt tttgagtatc aaaaaaaatg
     3721 caagcaaagc catcttcaca ttcgacttcc ttaaaactca ttttaaagcc cacttttctc
     3781 aagtattttt cagcaaattc tttgctttct aaatttaaat gctttcttaa tacttctaat
     3841 tcttccttgc tcgcaaaaat attgccactt tctccagtgc aacactttcc accacatttc
     3901 tcacaagcat tttcatcaaa agcataagaa aaatttttat caaatatcat aactttttaa
     3961 cctaaatctt aagtgaattt cttgcatttg tttgcttaaa atttcatttt catatacaaa
     4021 aaaaggaggt aaaatctcac aaggcgattt tgaacctttt tttacctgta tcaaaacaag
     4081 tcttgctttt ttgttttgat gtgtatgtac aaagcaaagc tttgttattt tcattttcat
     4141 atcttttaaa ataaaacaaa tttcatctaa agctaaagct tcatagcaaa aatacaaagt
     4201 accgtttggc ttaagcatag aatttgtttt agctaaaaag ctatgcaagg gtaaaaattc
     4261 ctgaaattta cttatagctt tatgctgatc ttcactcttg taagctcctt gtctataaaa
     4321 tggaggattg cagactatga agtcaaattt ttttatgatt tgaaattgat taaaatcatc
     4381 atgaaaaata tcgccttgta ttttgttgga ttttaaattt ttttcaatca attttatatt
     4441 ttctttttga atatcaatca aagataaact taaatttgca atattttttt taagtaaaat
     4501 acctatgata ccacagcccg cacctacatc aaaaacagcg cctttaattc cttgttttaa
     4561 aataaaatca gctaaaatta aagaatcact attgtaacga tacccttgtg ataattgtgc
     4621 tagcgtaatc agatctgaca tatattttaa tgcgttggaa ttttaatgcg ttttggagat
     4681 tgttctttaa atatatttcg ttcttttgtt atgttattat cttctttaaa atttactggg
     4741 ctttgtgctg ccaaaaaaga aattacaaaa gttataaaaa aagcaatttt tatcataata
     4801 acaccccata aaatggtgtc cacggcgaga ttcgaactca cggcctcaaa attaggaatt
     4861 ttgcgctcta tcctgctgag ctacgaggac agaaagcggg aaaaatcccg ctaaaaattt
     4921 aaccgtttct ttttttgatg atttcatccg caacattttt aggaacttca tcatagtgat
     4981 caaattccat agaataagtc gcacgacctt gagtttgact tctaagatca gtagaataac
     5041 caaacatttc agccaaagga caaaatgctg taatgatttt atttccacca cgctcatcca
     5101 tgctatttac ttgaccacgg cgtttgttaa gatctccaat aacatcaccc atgtaatctt
     5161 caggagtttc tacttcaact ttcatcatag gctctaagat cacagcacct gcttttctag
     5221 caccttcttt aaagcccata gaagcagcaa gtttaaacgc catctcagat gaatccacct
     5281 cgtgataact tccatcataa acagttactt taacatcttc cacaggataa cctgctaaaa
     5341 caccattttg taatgcttct tgaacacctt tatcaactgc aggaatgtat tcttttggaa
     5401 ttactccacc tttgatatca ttaacaaatt catatccact acctggctca agtggttcaa
     5461 ggcgtaagaa tacatgtcca tactgaccac gaccacctga ttgtttagcg tatttgtatt
     5521 cttgttcaac agtttttcta atagtttcgc gataagcaac ttgtggttga cctacttcag
     5581 cttcaacttt aaattcacga agcattctat caacgataat ttcaaggtgc aactcaccca
     5641 tacctgaaat gatagtttgg ccactttctt catctgtaga aactctaaaa cttggatctt
     5701 cttgtgctaa tttatttaaa gcaatagaca ttttttcttg atctgcttta gtttttggct
     5761 caactgcaac agaaataact ggatctggaa aatccattct ttcaaggatt accttatctt
     5821 tttcacttgc aagagtatcc cctgttaaag tatctttaag tcctacaaca gcaccaattt
     5881 cgcctgcgta aagcacttta atctcttctc ttttgttaga gtgcattttt aacaaacgac
     5941 caattctttc ttttttatct ttagttgagt tataagcata agaaccactt tctaaacaac
     6001 cgcgataaac acgcacgaaa gtaagttgtc ctacaaatgg atctgtcata attttaaatg
     6061 caagtcctgc aaactcgcca tcatcagttg attttacaga aacttctgtg ccatcttcat
     6121 attcaccctt gatatttgcc acttcatcag gagctggtaa ataagccaca acagcatcaa
     6181 gtaaaggttg aaccccttta tttttaaacg ctgtaccgca aagcatagga acgatagaaa
     6241 gacttaaaca tcctgcttta atccctgttt taatctcttc aaggcttaat tcttctccgc
     6301 ctaaatattt ttccatcaac tcatctgaag tttcagaaac tgcttctatc atttttgtgc
     6361 gatattcttc tgccttttct ttaagttcag ctggaatttc tttttctaca taatccgttg
     6421 gcttagtatc atcttcccaa actaaagctt tcatagttac aagatcgatt acgcctttaa
     6481 aattatcctc agcaccgatt ggaatttgaa gtggaactgg attagctttt aaacggttgc
     6541 gaatttgatc ttctacattg tagaaatttg caccgattct atccattttg tttacaaata
     6601 ctattcttgg aacaccatat ttatttgctt gtctccaaac tgtttcactt tgaggctgca
     6661 ccccacccac tgaacaaaat accgcaacag caccatcaag aacacgcata gatctttcaa
     6721 cttcaattgt aaaatccaca tggcctggag tgtcaataag attgatttga tgatctttcc
     6781 aaaaacaagt tgtagccgca gaagtgatag taatcccacg ctctttctct tgttccatcc
     6841 agtccatagt tgcagcacca tcatgaactt caccgatttt atgactcata cctgtaaaga
     6901 aaagaattct ttcagatgta gtcgttttac ccgcatcaat gtgagcagca ataccgatat
     6961 ttctaacttt ttttaaagga gtacttcttg acatacacac tccttcttac caacgatagt
     7021 gagcaaatgc tttatttgct tcagccattt tataagtatc ttctttcttc ttaaatgaag
     7081 cacctttgct atttgctgca tctaaaagct cagctgcaag tttatcaatc atagttcttt
     7141 cgcttctttt tcttgcaaaa gaaataatcc aacgaatcgc caaagcttgt tgtctagcag
     7201 gacgaacttc aactggaact tgataagttg caccacctac acgacgagat tttacttcta
     7261 ataaaggctt aatattttca atcgcatcat taaaaatatc aatacctttt ttctcgccac
     7321 cttttttatc aatagcttcc aaagcaccat acataattgt tgtagctgtg ctttttttac
     7381 catcatacat taaagaatta ataaattttg tgattacttt attaccataa atcggatcag
     7441 gtaaaacttc tcttaccgga gcttttcttc ttctcattat ttttccttca aattttaaat
     7501 tttactcaaa caaaatcaaa tctaacggat ttgtctgtat gaatgattat tttgcagcgc
     7561 ctgctttagg gcgtttagca ccatatttag aacgagaaac tgttcttttt gcaacacctg
     7621 ctgtatcaag agcaccacga acgatgtgat atttaacccc tggtaagtct tttaccctac
     7681 caccacgcac taaaacaatg ctgtgttctt gtaagttatg accttcaccg ccaatatagc
     7741 tgatcacttc aaagccacta gtaagtctta ctttggcaac ttttcttaac gctgagtttg
     7801 gttttttagg tgttgtagta taaaccctag tgcaaactcc ccttctttgt ggacaatttt
     7861 taagcgctgg agatttagat ttttctaaaa cttttttgcg ctcttttcta accaattgat
     7921 ttatggtagg cacaataatt cctttcttta aaaatgtaat aaactttgga tgatatctaa
     7981 tttttgctta tattttagtt aaaaagattg aaaatgagga aatatagccc cgaagggcta
     8041 taaaatagag ttttattctt gttctttaag ttttaaattt tgttcgccat aaagccctgt
     8101 tccaacagga atcattctac ctagaataac attttctttt aaatcttcta agtagtcaaa
     8161 tttacctgct atacttgctt cagttaaaac tttggtagtt tcttggaatg aagccgcaga
     8221 aatcacacta tcacttccaa tcgctgctct tgttacacct aaaagcacag gttcggcaat
     8281 agctggttct ccacccattc taatgattct ttcattttct tcacggaatt tacgtcttga
     8341 aaccaaatca ccttcaataa atttcgtatg tccactatct acaactttta cttgtcttag
     8401 catttgagaa acgataactt ctatatgttt atcagaaatc acaacacctt gtccgcgata
     8461 aacttgctga atttcagaaa tcaaataata atgcaaggct ttttcaccta aaattttaag
     8521 cacatcatga ctcgaaacaa ctccatctgt aagtttttca cctgcatgaa taaactctcc
     8581 atctcttact tgaatatgtt ttgatttgtc gattaaatac tcagcacttg ttccatcttc
     8641 tgcttggata ataattcttt ctttagaacg caaaggctta tcaaaacgaa caacaccatc
     8701 aatttctgca atcacagccg cattttttgg ttttcttgct tcaaaaagtt cagaaactct
     8761 tggaagacct cctgtaatat cctttgattt agctgctgct tttggagttt ttgctaaaat
     8821 atctgcttga gcaattttat cgccatcgtg aacaaaaata acggtttttg gttcaaggtg
     8881 ataacgcaca gctttatcac cttttcctgc aattaccaaa gttggtctaa ctccactagg
     8941 taaatactca ttaattacta aagaacgctt acctgtagct tcatcaattt gctcatcagc
     9001 actataacct gcttcaatat cctcaaagct tacaacacca tcaatttctg caatgatagt
     9061 attattataa gcatcccatt ctgcaatcac ttttctttct tttttaggag cacttgcaat
     9121 gatagtattt gcgtcatcga ttttttcact atcgttaaat tctatcttag attctcttgg
     9181 gatatagtgt ctttttgctt ctctatcatt ttcatcagca atcactacaa agaatccttt
     9241 ttctttaaca atatcacctt ttttaacatt ttttactcta tctaaaccat cgcctttaag
     9301 gatgtaaaat ttgagtgttc ctttttcgcc tgctttgata ttttgaacta caggctcgcc
     9361 atcttctact aaaatttcac tcgcaaaagg aatacgattt ggtacattcc aaccctcttt
     9421 aatcacttct acgatacttt cattttcttc tacttgcatg ccgctttgat atggcaaata
     9481 aagttttcca tctatactgc cacttacacc tgctaattca tttggtttag caagatcgta
     9541 ttttcttaat atgtatttta cttcttgttt tttatcttta atagaaacaa tcacatcttc
     9601 atgaatattt tctatattaa tcacaccttt aaatggagtt ttgatttttg gctccacaag
     9661 taaaaccgcc gcatttctac gatttgctac gatattttta ccttctttgt ttttataagt
     9721 tttaagatta taaaatctta taaaaccttc tttttgtgcg cttacttgtc tatcttgtaa
     9781 atccgtactt gcagttcccc cgctatggaa agttcttaga gttagctgcg ttcctggttc
     9841 accgatagat tgagcggaaa taattcccac tgcttcgcct ggttttacta atttaccttc
     9901 accaagattg ataccataac attttgcaca aattcctttt ttagctttgc aggtaatagg
     9961 agtgcggata ttgacacttt ttataccgct ttcgccaaga atttttgctt tttcctcatc
    10021 cattaaagta ccttccgcaa aaagcacaga atttgtaata ggatcaatca catcctcagc
    10081 taaaaccctg cctaaaattc tttcttctaa agtttctata atagaactat ctgcggtaat
    10141 ttcattgatt tcaacaccct catgtgttcc acaatcttca atggtaattt ttacattttg
    10201 tgcaacatcg atgagttttc ttgtcaaata acccgcattt gctgttttaa gagcggtatc
    10261 tgcaagacct tttctagcac cgtgagttga aataaagtat tcaagaacat ttagcccttc
    10321 acggaaattt gaaataatag gcgtttcgat aatagaacca tcaggtttgg tcataagtcc
    10381 tctcatcgca gcaagctgag aaatttgagc tgcactaccc ctagcaccag aatctgccat
    10441 catataaata gagttaaaac cttctttatc tttttctaca agcttcatca tttcttttga
    10501 aagaacattg tttgtacttt tccaaatatc aatgatttta ttgtatcttt cccctgaagt
    10561 aatcaaaccg agattataag aattttgaat ttctcttact tgtttttttg cttcatcgat
    10621 agctttttgt ttatcattag gaacaataat atctgcaatc gaaattgaaa tacctgcttt
    10681 agttgcatat tcaaaaccta aatttttaag tctatctaag aaacttgctg taatctctaa
    10741 accaccttgt ttataaacat aatctacaag cgcagcaatg tcttttttct ttaagacttt
    10801 attccaacta ttttcaggca caaaatcagg caagatggat ttaacaatca atcttcctgc
    10861 tgtagtggta atctttctac catctaccat agtttgtatg ctcgcatgaa tatccaaaca
    10921 cttgctttca agtgccatca tcacttcatc aatgcctgta caaattttat gcgaaccttt
    10981 agcacctgct ttttccaacg aaagataata aattcctaaa accatatctt gcgatggaac
    11041 ggttacagac ttaccgcttg ctggtaaaag aatattcatt gatgaaagca taagcacttt
    11101 acattctgca atagcctctt gagaaagcgg tacatgcact gccatttgat ccccatcaaa
    11161 gtctgcgtta aatgctgcac aaaccaaagg atgaagttgt atagccttac cttccactaa
    11221 aacaggatga aaagcttgga tagaaagctt atgcaaagta ggtgcacggt ttagcataac
    11281 aggatgtccc tttactacct cttctaaaca ttcccaaact tcattggttt tattttctat
    11341 cattttttta gcttgtttta ctgtggttgc ataacctttt tcttcaagct tagctaaaag
    11401 atgtggctta aaaagctcta aagccatttt tttaggtaaa ccgcattgat ccattctaag
    11461 ttttggacct acaacaataa cgctacgacc tgagaaatcc acccttttac ctagtagatt
    11521 ttgtctaaaa cgtccttgtt tccctttgat gatttcactt aaagatttca atgggcgttt
    11581 atttgctcct tttacagcat tagcacgacg accgttgtca aaaagcgcat caacagcctc
    11641 ttgaagcatt cttttttcat ttctaataat gatttcaggt gcatcaagtt ccataagttt
    11701 tttaagacgt gtatttctat tgataacacg acgatataag tcattcacat cagaaactgc
    11761 aaatttccca ccatctaaag ccactaaagg acgcaaatct ggcggtaaaa ctggaagatt
    11821 tgtaatcatc atccattcag gacgatttgg tacagcttcg tcgctatcgg tattggcgtt
    11881 taaatttgaa tttaagaaat tttctacaac ttttaagcgt ttaatgatag tttttttctt
    11941 agcctctgaa tttgtagccg ccatttcttc tttaagctga tttaaaagcg ctacaagatc
    12001 taaatttgca agtaaatcac gaacaacttc tccacccatt cttgctttaa aaccgctatt
    12061 ttcatagcgt tgcattaaat tttgatattg ctcttcgttc aaaacatcgc aatattccac
    12121 ttttttagta ctttcattat catagaaagc atcacctggg ttttcaacaa tataagcttc
    12181 ataataaagc acgcgctcaa gatctttcat cttaacaccc aaaagcgttc ctatacggct
    12241 tggaagagaa ttaacatacc aaatatgagc cacaggagtt acaagctcga tatgccccat
    12301 tctagaacga cgcacttttg aatttgctac ttcaacacca catttttcac acttaatgcc
    12361 tttaaaacgc atttttttgt atttaccaca aagacactca taatctctta taggtccaaa
    12421 aatctttgca caaaaaagcc catctctttc aggctttaag gttctataat taatagtttc
    12481 tggttttttt acttctccat aagaccatga tttgattttt tcaggacttg caagtcttag
    12541 ttgaaatgct tcaaaatctc taggtcttgc atcttcttta atttctatta ctttaaattt
    12601 actcattatc ttcatcctta tcaaaaatct caacatctaa agcaagagat ttaagctcat
    12661 tggttaatac aaaaaatgtt tcaggaattc ctgttgctgg aacattttca ccttttgtca
    12721 atgctttata ggcactaaat ctaccttcta catcatctga ttttatggtt aacatttctc
    12781 ttaaagtgtg agccgctcca taagcttcaa gtgcccaaac ttccatttct ccaaatcttt
    12841 gtcccccaaa gagtgcttta ccacccacag gttgttgggt aaccaagcta taaggtcctg
    12901 tacttcttgc atgaactttt tcatcaacca agtgatggag ttttagcata tacatacatc
    12961 ctacatgaac acgctctgca attttttccc ctgttcgtcc atcgtaaagt tctgttttgc
    13021 catccatatc tatcttagcc attttaaaaa gcttgctaaa ttcttctata tttacacctt
    13081 caaaaacagg agtagaaaat ttaactcctt tactccagtc tctagcatag tttaaaagct
    13141 cttcatcgct taagctttta ataaattctt tttcgtttgc aagtcttgga agagaacaaa
    13201 tttcaagcat tttcgctctt aattctttaa gaaaatcttt ttgctttcta tcaaaaattt
    13261 cttgaatttg atccccaagt ctaagtccaa ctaaacctaa atgactttct aaaatttgac
    13321 ctatattcat acgacttgga acgccaagtg gattaagcgc aatatccaca ctcttaccat
    13381 ttggcaaata aggcatatct acttcaggaa ctatagttga aactatacct ttatttccat
    13441 gacgtcctgc cattttatca ccgactttaa gctttctttt tgtagcaata taaactttaa
    13501 caagcttaat taccccactt ggtaaaatat catctttttc taaaatttca agcttttcat
    13561 cgtgttctgc ttttaatttt ttcttctcat tttggaaatg attttttaaa tcatcgtatt
    13621 ctttttgaat ctctttagaa taagctttaa tcaaagttgt taaagtaaaa cgattgattt
    13681 tttcaagttc gctaatatct gcagtttgtc cttttttata atttttatct ccaatttttt
    13741 gatcgctatt taaaggggct ttggaaagaa gagcacaaac acgaagcatt tcttctctat
    13801 ccatcatcaa aagtctatca tgatgctctt tttctaaagc cattttttct ttatcataag
    13861 attttattgc gcgatcatct ttttcatagc cttttttagt gaaaatttta acatccacaa
    13921 caacaccctc taaagaagcg gttgcataaa gggatttatt cacaacatgt cctgcttttt
    13981 ctccaaaaat cgctcttaaa agtctttctt caggagttgg tttaacctca ccttttggag
    14041 aaaccttacc caccaaaatc atacctggtt taatatgggt accaattttt gcaataccgc
    14101 tctcatcaag atgcgcaaca tcttcttctt ttacatttgg aatatctttg gtaatttctt
    14161 ctataccgtc ttttagttct cttgcttcaa tttctttttc ataaatgtgc acgcttgtaa
    14221 aagtatcttc acgaataatt ctctcactta caactatagc atcctcatag ttataaccat
    14281 tccaaggcat aaaagcgatt aaagcatttt tacctatagc aagttcgcct tgatccatag
    14341 aaggaccatc tgcgataatt tgtcctgctt ttacgatatc acctttttta acaatagggt
    14401 gttgaatata atttgtattt tgattggttc ttaaattttt ctccatagtg taatggtcaa
    14461 taaatggacc tttatcatct tcacctaaaa tgaaaatgct tttattatcc actttctcaa
    14521 ccacaccgcc acgctttgct ttaacagctt cccaagcatc acgcgcaata atttgttcca
    14581 tacctgttcc tactatcgga gctgaagcag taagaagtgg tacagcttga cgttgcatgt
    14641 ttgaacccat tagcgctctg tttgcatcat cgtgctctaa aaacggaatc aaagaagctg
    14701 caactccaac aaccatacct gagcaaagat cgattaattg cacttcttcg cgtcttgcaa
    14761 gtatagtttc accatcttgc ctagcctcaa caaattcttc tactatattg cctttagcat
    14821 caaccttagt tgaagctggt gcgataaaca agccttcttc ttgtgtcgct gtaagataaa
    14881 caacttcatt agtcacttta ccatttacaa cttttctata tggcgcttca acaaagccaa
    14941 gttcatttac ttttgcataa gtagaaagag tgttaatcaa accaatattt tgaccttcag
    15001 gtgtttcaac tggacaaatt ctaccataat gtgtcgcgtg aacatcacgc acttcaaaac
    15061 ctgctctttc ttttacaagt ccaccttcac caagcgctga caaacgacgc ttatgagtaa
    15121 cctcgcttaa agggttggtt tgatccataa attgcgaaag ctgacctcct gtaaaaaatt
    15181 caatgatagt tgtagtaatc attttaggat tgattaaatc ataaggcatt actttatcaa
    15241 gatccgcatt taaagaagta aatttatctc tgatcgcctt ttgcattttt gcaagaccta
    15301 aatgaagttc attagctaaa agttcaccta tagaacgtat acgacgattt cctaaatgat
    15361 ctctatcatc aatatgtcct ttaccatttt ttactttaat taaatatttt gcagttttaa
    15421 taatatcttc attagtcaaa acagtaacat actcaggcac ttcaagacct aacttatggt
    15481 tcattttcat acgacctacc ttagtaagat cgtatctttc aggattgaag aataaatcat
    15541 ttacaaaagc cttcgctgca tcttttacca caggttcacc tgggcgcata actttgtaaa
    15601 ttctaatcgc agctaaatca ttttcatcat cgatattttc actttgttta agaagtttta
    15661 gagtttctcc atcttgagca aaggagttaa taatcgctgc atcaacgcca ttagccaagt
    15721 catttgctat atcaaaactt ttttgctctt taatcttagc aagcttactc tcatctaaca
    15781 aagttaaaga atcaaataaa acctctccac tttctttatc aataatagga tttgctaaat
    15841 aacgattaag taaaatttct acaggatatt ctatccattt taaaccgtct ttaataagct
    15901 gttctgcttt tttctttgta agtctttttc cagcttgatg aacgattttt cctttttcat
    15961 ctttaatatc atattctatt ctatccataa aatcatttgg attaaattct gttaaaaatt
    16021 tatctttttt cacatgtata gtctgaatag gataaaacaa cttaataata tcttgttttt
    16081 tataccctaa agctctaaaa agcatagtta caggaacttt tctacgctta ttgattctta
    16141 catacaaaac atctttggca tcgtattcaa aataaagcca cgaaccacga tcaggaataa
    16201 tttgtgctgt ataaacaagc ttatttgcaa ccgttgaact ttcttcttct ttaaaaataa
    16261 caccagggct tctatgtaat tgatttacaa ccaccctctc aaccccatta atgataaaag
    16321 atacacgatc tgtcattaaa ggaatttcgc ggatataaat ttcttgttct ttaatatctt
    16381 ttacgccaac tttttcccct gttttttcat ctttttcatg cagagtaaga cggattttca
    16441 tttttaaatt tacagaataa gtcaaacctc tttccatgca ttcgcgaatg gtatattttg
    16501 gcttgcctat ttcactacta acatattcaa gactcaatct attttgcgga tcatgaatag
    16561 gaaaaattga tttaaaaact ttttctatac cactttcacc attatcaaga tttaaaaaat
    16621 aatcaaaact ctttttttgt aattgtagaa gatttgggat ttctatttgt tttgaaatgt
    16681 ttgagaagtc tactcttaaa cgatttccta atttattatc taacatatcg cacatacctc
    16741 atggtaaatt ttgtaaattt aaaaaagaag acctaaaaat taggtaaaaa taaaaaaaga
    16801 agacttgcct tggcaaatct tcttctaact ttaaagctta aaattactta agttctactt
    16861 tagcaccagc ttcttcaagt tgttttttag cttcctcagc ttcagcttta gccacaccct
    16921 cttttagagt tgaaggagtt tgctcaactg catcttttgc ttctttaaga ccaaggcctg
    16981 taagagcacg aacgatttta ataacttcaa tctttttagc accgccatca gttaaaacga
    17041 tatcaaattc agttttttct tcagcagcag ctgcagcacc accagctgca gcaccaccag
    17101 ctatcattac aggagcagca gacacaccaa atttttcttc aaactctttt acaagttctg
    17161 ataactcaag aacacttaaa tttgaaatat attctaatac atcttcttta gagattgcca
    17221 ttttttatcc ttttatttaa tttattcaga ttctttttta tttttaagcg catttaaacc
    17281 tattgtgaaa ttggtaattg gcgcattcca aacttgcaaa agcatagcaa gcaactcatt
    17341 gcgtgaaggc attttagcaa gagctttaac cttagcaaca tctgcaactt cgccttcaat
    17401 atgagctgtt ttgatttcaa atttatcgtt attttcttca aatttagcag ctacttttga
    17461 aacacctagc tgatcttcgc cccaaagata aatatttgta tctttaagaa ctagacctgt
    17521 tttaccggaa ttgttaagag caatgttagc caaagtattt ttaacaattt gaacttttac
    17581 attgttttct cttgcattat ttctaagctc ttctagtttt tttgtgctaa gacctctgta
    17641 attacaaact acaatagctt cactagcttt aaaaccttct tcaagtttag caataatctc
    17701 aactttttcg cttctagtca cattttctcc tttccgattg agatttcaag tagagtggaa
    17761 atccaattaa gcttacgcct cgactatctt caatctaaaa taaacatctc aaaaaatcaa
    17821 aaattttttc aaatgtttat tttaaaacaa aagagttgca aaaaagcaac tcttatttca
    17881 tatcaagcaa ttcttgtgtt tcaagcttta cagaagggct cattgtcaaa gataaagccg
    17941 catttttaat atatctacct ttagctgcag caggtttatg tttgttaatt gcctttacaa
    18001 aagtgctaac attatcccat aattgttctt tggaaaaact tactttacca agacctgcat
    18061 ggatatttcc ttgcttatca acacggaaat ttacctgacc actttttgca ttattaactg
    18121 cttgagcaac atccatagtc actgttccag ttttaggatt tggcattaaa ccttttggcc
    18181 ctaaaattct accaacttta ccaacaagtc ccattaaatt tggagtagca atcaaaacat
    18241 caaaattcat attacctttt tgaatttctt ctactaaatc atcgctaccc acaatatctg
    18301 caccagcatt tttcgcttca tcagcttttg cgtcttttgc aattacagca acacgaactt
    18361 ttttacccgt tccagcaggt aaaacaacag atcctcttac catttgatct gcatgtcttg
    18421 gatcaacatt aagttttaaa gcaatttcta cagtctcatc aaatttagca gactttaaag
    18481 tctttattgt atcaattgca tcgcttaaag catactcttt atttgaatca attttttgtg
    18541 ataattcttt taatcttttt gctatcttag ccatttattt tctccgcatt ttaaagtgct
    18601 accgcctttt accttggcgg tgaaaggatt aatctacgat ttcaacaccc atagaacgag
    18661 ctgaacctgc aataatttta gcagcttgat ctctatcttt agtatttaaa tctgcaattt
    18721 tcttatctac tatttctaaa acttgagcac gagttaactt acccacctta tttttaagtg
    18781 gattatccgt acctttagaa attccagctg cttttttgat caaatccgta gctggcggtt
    18841 gttttgtaat aaaagtaaaa cttttatctg cataaacagt gataacaaca gggatattaa
    18901 aacctgccat atcttttgtt ctttcattaa aagccttaca aaactccata atattaacac
    18961 cttgctgacc caaagcagga ccaacaggtg gtgatgggtt tgcttttgtg gcagcaattt
    19021 gcaatttaat ttcgcctacg acttttttag ccataacaaa tctccttact tgatataaat
    19081 taaattattt tctcaacttg agaatataag atctccactg gagttgaacg tccaaaaata
    19141 gaaacattta attttaataa accacgaacc atatcatact cttctacaat tgcagtaaag
    19201 tttgcaaatg gcccttctgt gattctcaca ttttcccctt cttcaaaaga aatctttggt
    19261 ttaggcgctg cacgattgtg aactttttcc aaaatcaaat taatatcttt ttctgttaaa
    19321 ggggttggct ttttggattc tccaataaaa cgaccaactt ttggaagaga ttgaatgcga
    19381 tgccaaagct ctgtatttaa atcaagaagt gcaaaaacgt atcctgaata caaacttctt
    19441 tcgctaatct tctcctttcc attcttaaat tcaataacat cttcagttgg aacaacaatt
    19501 tctttaagct gttcttcaat tccgttatct tttactaaat tttcaatggc tcttttaact
    19561 gccatttcac tgccagcata agtttgaatt gcataccatt tatgagtact catttactct
    19621 ccttatacga tcgcagaaac aatagaggac ataagccaat ccactaacgc caaaaacaaa
    19681 gaaatcaccg caacaaccac aaaaactgta atataggcat ttcttacctg ttcttttaaa
    19741 ggaaaaatta ctttccttaa ttcggctttt gataatttaa aataagttat taatttttcc
    19801 atttatttaa accttaatta tggcagggca agagggattc gaacccccaa ccatcggatt
    19861 tggaatccgg cgctctaccg ttggagctat tgccctaagg gcgcaagctt aactttttag
    19921 cttaacttct ttgtgaagtg tatgtttttt taatcttggg caatattttt ttaattctaa
    19981 tttttcagta gtatttttac tatttttata ggtgctataa ttaatatcac cacattcttc
    20041 acactttaaa ccaactttaa ttctcatttc aattttcctt aaaaaattaa agccaagctt
    20101 ttaacttggc tttattaaat tatttaataa ttttagaaac aacacctgaa ccaacagttt
    20161 taccaccttc acgaatagca aaacgagttc cttcttcaag tgctactgga gcgatcaagc
    20221 ttacagtaat tctcacattt tcacctggca taaccatttc aacaccatca gctaatttaa
    20281 tcgaacctgt aacatcagtt gttcttacat aaaactgtgg tctatagttg ttaaagaatg
    20341 gagtatgtct accaccttca tctttattta agatataaac ttcagcttcg aagtcagtgt
    20401 gtggagtaat tgattttggt ttagcaagaa ccataccacg gataacttct tcttttttag
    20461 taccacgaag aagaacacct acgttatctc ctgcttcgcc ttgatccatt tcttttctga
    20521 acatttcaac acctgttaca gttgttgttt gagtatcttt aataccaacg atttcgatag
    20581 tatcacctac ttttacaaca cctttttcaa ttctacctgt aacaacagta ccacgacctg
    20641 aaattgagaa aacgtcttca attggcatca agaagtcttt ttcagtatca cgagttggag
    20701 ttggaatata gctatcaact gcagccataa gatccataat ttttgctgac cattcaccat
    20761 cttgtccagc tttagcttct tcaagagctt ttaaagcaga accagaaata ataggtgtat
    20821 catcgcctgg gaaatcataa gagcttaata attctctaat ttccatttca actaactcta
    20881 aaagttcagc atcatcaacc atatctgctt tattcataaa aacaacaata tatggaacgc
    20941 ctacttgacg agaaagaaga atatgctctc tagtttgtgg cataggacca tctgcagcag
    21001 aaacaaccaa gatcgctcca tccatttgtg cagcacctgt aatcatgttt ttcacataat
    21061 ctgcgtgacc tggacagtca acgtgtgcat agtgacgatt gtctgtttca tattcaatat
    21121 gagaagtagc aatagtaata ccacgctctt tttcttctgg agcattatcg atattatcat
    21181 aatctttaag ctctgctaaa cctcttctag aaagaacagc agaaatagca gctgttaaag
    21241 tagttttacc atggtcaacg tgaccaatag taccaatgtt tacgtgtggc ttattacgtg
    21301 aaaatttttc tttagccatt ttttcctccg tataaaaaat aaattgagca aagcaagtct
    21361 tatatctata taattttttc aattcatgga gctcatagcg ggaattgaac ccgcgacctc
    21421 tcccttacca agggagtgct ctacctctga gccatacgag cgctcagaaa aattatacac
    21481 aataacagac aacaaaaact cttaaatggg atatatactg taagttaaag gttttaaaat
    21541 acagctccca gttcttttaa attattggag cgggaaacgg gactcgaacc cgcgaccctc
    21601 agcttggaag gctgatgctc tagccaactg agctactccc gcaaagcatg gtggtgagtc
    21661 gtggattcga accacggaag gcgaaagcca gcagatttac agtctgccct cgttggccac
    21721 ttgagtaact caccataaaa atattgcttt ttcaatattc tggtcaaaca ctgctaaaat
    21781 aaatggagct ggttaaggga cttgaacccc cgacctgctg cttacaaggc agctgctcta
    21841 ccaactgagc taaaccagca aaaataaaag tgagattata gctcaaaaaa aaatttttgt
    21901 caagactttt ttagtttttc tataaaattt tagtcttata aagtttatta tcataaacca
    21961 atattatttt tatctattta tgataatcaa acaaatttaa aaatttcttt gctctttcgc
    22021 tttttggatt ttcaaaaaaa cttttaggat cattttcttc gatgattttt ccttcatcca
    22081 taaaaatgat tttatctgct acagctttag caaaacccat ttcatgagta acaataagca
    22141 tagtcatacc ctcttttgca agatttaaca tcacttctaa aacttctcta acaatctcag
    22201 gatccaacgc tgctgtaacc tcatcaaaaa gcattaactc aggattcatg cataaacttc
    22261 ttactatggc aattctttgc ttttgtcctc cgctaagttc tcttggataa gcatgaattt
    22321 tatgcaaaag ccccaccttt tcaagccaaa ttttagcctc ttttaaaacc tcatctttct
    22381 ttcttttttg cactttcata ggccctagaa gtatattttc ttcaacactt aaatgctcaa
    22441 aaagctcata agattgaaaa accataccaa ctttttgacg cattcttggc cattctttaa
    22501 aatctttatc tattttctca ttatcaatat aaatattacc acttgcaatc tcttcaagcc
    22561 cattaataca acgcaaaagc gtagattttc cacatccgct aggacctaaa atcaccacaa
    22621 cttctttagc cttaacttct aaattaatat cttttaaagc atgatgcgaa ccataatact
    22681 tttgtaaatt ttctattttt agtatactca ttttagctcc attttttctc taattttctt
    22741 gaatataaag tgataggata acaaagtata aaaaagataa aaaaaatcaa accataaata
    22801 ataaaaggtg caaaatcatt tctattatga aattctataa tttgttgccc tacttttaca
    22861 agctctaccg cgccgattaa ataagcaaag gttgtacttt taatcatacg agtaagtaaa
    22921 ttcatgctca taggagttaa acgacgcata gcttgtggaa taataacata agcaaaactt
    22981 tgcaccgtat ttaaacctaa agatgatgca ctttcatact gatgttttgg aatactctgc
    23041 aaggaaacac gcaccaaatc catcatctca aaacaacccc aaatgctaaa aacaataata
    23101 gctacactta cagaactcaa atcccaccca aaccatctag gaaaaccaaa atacaccaca
    23161 aaaaaccata ctaaaagtgg cataacacgt acaaattcta aacctaaacg acaaaaagca
    23221 tagatatagg tatttttaaa actcattaaa attcccaaaa acaacccgcc tatcgaagta
    23281 ataataatgc tgataaatga aatttcaaga gtgacaaaaa gcccttgcca gagtcttaaa
    23341 agcgtatcgg tatttaaaag ttcaagcata aagcaacctt ttttcaaact ttagcaaaat
    23401 aaaagacaaa ggcaaaataa tgcacaaata tcccataaac aacaaaaaca atagctcatc
    23461 tgtcttatag gttaaggaat ttaaactctt cattaaattc accaaatctg gcaaggcaat
    23521 aatgctaaca actgaagttt ctttgattaa aaatataata ttagcactaa tacttggcat
    23581 agaaatagcc aaagcttgcg gcaaaatcac ataacgcaaa tttccaaatt ttgaaaaacc
    23641 caaagaaagt cctgcttcaa actgctgttt tcttatggct tcaaatcccg cccttaaact
    23701 ctcagccata taagaacccc ctaaaaaact aagtcctact atagcacaag caaaagaagg
    23761 tcttaaagtt tcttctacgc ttaaacaaat taaattgagc ggtggaattt gctctaaatg
    23821 tatattaaat ttaggcaaag cataatataa gaaaaaaagt tgaattaata aaggcgtatt
    23881 tcttgaaaac tctatataaa gcttgcaaat attttctaaa atttttattt taaaataact
    23941 cattaaaata caaaacaaac ctattatcaa agaaaaaata attccaaaaa agcttagttt
    24001 tatcgtaagc caagcagccg ttaaaaaagc aggagcttga gctaatataa aatcaaaatc
    24061 cattctctac cttaaatttt accaaagttc tttcatgatc atatctttat ttaaaatttc
    24121 aattctacct ttttttgtat caataagttc tgaaatttta agttctttta acactcgaga
    24181 taaagattgt gctctaacat ttaaatcaat tgcaatttgt ttttgtgaaa ttgtatctaa
    24241 atttttttca ttttccaaaa gatactttaa taatctcgtc cttaaatcta atgcattttg
    24301 agataatttc ttttctaaaa ttttaatttt atcaaaaagt gaactgataa gtaaaaaatt
    24361 gaattcttta ttttcactgc ataaattttg aaaattaata aaatcaattt ccaaaatttc
    24421 tccttcctct tcaaaaatag cattagcagg ataatttaat tttttaaaag caggcatttc
    24481 tgctataaaa tttggaggat taaaataatg caaagtaatt tctttatcac ttgctgtact
    24541 tttataaatg cgtatttttc ccttgagtaa aataaaaaat tttttagcct cttcgccttc
    24601 ataaaataaa atactatttt tttgaaattt ttttaatttt cctacactag ataaaagttc
    24661 taaataatct ttcattatat aatatttcca ttcttaactt atgttaaatt taatttatct
    24721 tatttttgct atattaacgc cataaaatta acatttaaga aaggcttata tgaaatttga
    24781 aacaattaat caagaaagca tagcaaaact catggaaata ttttatgaaa aagttagaaa
    24841 agataaggat ttaggtccta tttttaacaa tgctattgga acaagcgatg aagaatggaa
    24901 agaacataaa gcaaaaatag gaaatttttg ggcaggcatg cttttaggcg aaggtgatta
    24961 taatggacaa cccttaaaaa agcacttaga tctacctcct tttcctcaag aattttttga
    25021 agtttggcta ggactttttg aagaaagttt aaatatagtt tataatgaag aaatgaaaac
    25081 agttatttta cagcgtgcac aaatgatagc ttcacatttt caaaatatgc tttacaagta
    25141 cggcggacat taatttggca atttttttgc caaatctttt tttacctttt gtaaaatctc
    25201 ctcatccgtg gaaaaatcaa aaaatttaaa ctcatttcca tgttgcataa aaccatcgag
    25261 caaatctcca ctcaaacggt ttttaagatc aagctctgct attttaaacc catctaaagt
    25321 gctagcaaat tcttttaaac gacttggaat ttctttaagt ttagtataaa gataacaagt
    25381 gcttttaagc cctacacgac ctacacgacc acgaagttga tgcaaggtag caagtcctaa
    25441 acgttccgct cctacaatca ctatcatact caatcttggc aaagaaatgc ccacttccac
    25501 tactgtagtg cttagtaaaa tatttccctc atctctaaaa cgctctaaaa tttcatcttt
    25561 ttgtttatct ttcccatgag ttacaaaaac tttttcatag tgactctgcc aatattcttt
    25621 agcctgctct aaagaaagat aaggaatatt atcactagca ctcactaagg gataaataat
    25681 gataatttga tgatttttag cgatttcttc tttgatcttc tcgctaagct tagaaaagcc
    25741 ttcattttgt atacaataag ttgtgatatc ttttttaaaa ggcatttgtt taatgaaact
    25801 aaaatttaaa agttcagatt gtatcatgct taaagttctt ggaataggcg tagctgaaaa
    25861 ctgtataaaa tgaggggcaa attcttgttt acttaaagaa tgaattttct cacgctgagc
    25921 cgcgccaaaa cgatgttgtt catctatcat tacaagtacg gcattatggc tttctaaatg
    25981 aattaaagca tgagtaccta taataagatt tgctttttgg atattttgtt ctaaatcttt
    26041 ttctttttta cctcctttaa taaacaaaat attcataaaa tcaggcaaaa atttcttagc
    26101 ctcttcataa agctgatgcg ctaaaatact agtaggtgcc atcaaaatag cttgtttagg
    26161 ataaaccatc aaagccgcac caagcaaaac caaggtttta ccacacccta catcacccat
    26221 aatcacacgc cttctagctt cttttgaatg caaatctttt tctatatctt ttaaggcgtt
    26281 aagctgatct ttagtaagag aaaaaggcaa atctttaagc caattggcta tgttaaaaac
    26341 attgatttga tgagctttaa aatgcgtttt tttagctttt aaacgcttta aaaaattata
    26401 tatttctata tattttaaat ctttgctaaa attttgcaaa ttttcaaaca taaaaaaact
    26461 tttttcatca taagcatgca aatttaaaag aaaatgtata tatttatccc ctatgccact
    26521 ttcttgtaaa ttttcataat taagatattt atgtataaaa gcagcaattt ttgcatcttt
    26581 taaacctaaa atttgatact ttggactaaa accctcaaaa gaagttaaaa ttttaggatt
    26641 gttaaattgc caagtgtgat taaaacgcga gagtttagca ttaaaaataa gcccttttcc
    26701 taccttacaa atcccaaaat gccaagctct aggatgaaaa aacacaaaag aaatattttc
    26761 ttgccattct tcacaaaaac ctaaaccaaa aagttgattt tttcttgaac taacgctttt
    26821 tatagtgatt ttttgggtgc aaatttcatt ttctttagga tttttacttg gatttaaatt
    26881 ttcaattttt ttaggtaaaa gaagcgctaa atcaatagca cttttaattt ttaatttttt
    26941 aaaaaattca aaatcacttt ctttaatttt cattttgtat gcttgcaaaa cttatattta
    27001 aaagctcttg atgtttttta atataagcat ttatggtttc aagtttaacc ttttccataa
    27061 gttttaactc ttctttataa tatcccaaat ttaaaccttg ataaaattca ttaaaggccg
    27121 tagataaacg attgcttaag ccttcataac gcaaaggagt tgatcctatg agaaaatttt
    27181 tagcttgatc aagttcattt tgagtcatgc cattttttat aaaatcttca aaaagctctt
    27241 ttacgatttt tttagcttct ttagcgcttt catttttagt ttgtaaatat ccaaaaactc
    27301 tagaaaaaga catattcata tcaagcatag cataagctga gtatgcaaga cctcttttaa
    27361 cacgaatttc ttccataatc cttgaaccaa accccccttg ccctagaaca aataaagcaa
    27421 tttttgcaag atataaatcc ttatctttaa aatcagcaaa aaaaggcgta gcaaaataaa
    27481 tataagcttg ttcactttct gggcgtagca aaatttcatc tttgatgttt ttgcttaatt
    27541 catatttttt tggagtattt tttttgccta tttgaagttt tgataatagt tttaaaagat
    27601 cttccttggc ttgtttttct tctaaatctc ctcctaaaat cacaaccaaa tcactaagat
    27661 ggataaaatt tttataaaaa ttttgtaaat cttttaaaga taagatttct atactttttt
    27721 catctccatc gtttgagctt tgaaattctt tgcatttaaa aatttgagca ttaagtaaat
    27781 tttttgctaa ataatcaaaa tcactatttt tactcgcgag ctcacctaag gcattgattt
    27841 ttaatttttg caaaattttt tcttctattc ttggttttaa aagcaatttt tctaaactct
    27901 ttaaagcaaa atcaaaattt tcttttaaac aagaaagatt gatttccaaa ctttcaaaac
    27961 cactacttgc ctctaaattt atcgctctaa attctaaatc tttaaaaaat ttatcatcca
    28021 caccttcatt taaaatacgt gaaaacatct tagctaagcc tgctatttca tcataacttc
    28081 tagcgcaatt tctaaaaaca agctttaaaa caacaatagg aaaatcagaa tttttttcaa
    28141 aaataaaagg gattttaata cccctactct ctaaatactg cattaaaacc tttctaaaat
    28201 ttcataagcg gtattgcgtt tagctggatt ttcgcctaaa cttctaatca gccttatcat
    28261 ctcatcttga ttcattctat aacttgctcc tgcagcactt actacatttt cttccatcat
    28321 agttgagcct aaatcattgg ccccaaattt taaagcaagt tgacctataa gtgagccttg
    28381 agttacccaa gaactttgta aatttttaaa attatctaaa taaagtcttg ctaaagctaa
    28441 aagtcttaaa tatttgttag aactttgttt cataatctct ggatgttttt ggattaaagc
    28501 agtattatca ctttgaaagc tccataaaat aaaagctcta aatccccctg tttcatcttg
    28561 taattttctc aaatgctcaa aatgatcgat gatttcttca tcattttcaa ccgttccaaa
    28621 catcatagta gctgtacttt tcataccaat tttatgagct tggcgatgta cttctaacca
    28681 agtagctgta tcacatttat ttggtgcgat aatatcacgc accctatcgc ttagcacctc
    28741 agcacctgct cctggtatag aaaataaacc tttagcttgc aatcttttta acacttcagt
    28801 gattgaaatt ttagatgctt ttgcaatata agcgatctca actgctgaaa aaccatgcac
    28861 agtgatattt ggataatgtt cttttatcca agaaactaat tcttcatacc attctatttt
    28921 taattttgga tgcaccccgc cttgaaaaag aatttgtgtt cccccgatag cttcaagctc
    28981 ttctatcttt ttgcctatct cttcaaagct taaaatataa gcatcatctt ctttatgatg
    29041 gcgataaaaa gcgcaaaaag aacaatcaat acaacaaaca ttagtataat taatatttct
    29101 atctacaaca aaagtagtga ttttttcagg atgaagttct aattttcttt tataagccat
    29161 ttctccaagt tcagttaaac tcgcatgatg taataaatct aaagcttctt ttttatccag
    29221 tcttttcaaa atttttcctt gtttttttta cataattaaa ataattataa catttaaaat
    29281 ataaattatg ctatagtttc gcttatgaat tacattgaac tattaaaaaa taataaaaat
    29341 atcagaatat tggcttcggt tcagtttata gtatattttg gagcatggtt ttctcaaacg
    29401 ggagttttta cccttttagt cgaacttaat gctcctactt gggcaacagc tacaagtgct
    29461 atgcttgctt ttttacctgg agttttactt gctcctatta atggcgtcat agtagagaaa
    29521 aataaaccta aaaaactttt actcagtatg attagcatag aattaatttc tattttttgt
    29581 cttatttttg tcacaagtct tagtatgctt tggcttttat ttattttaat tttcataaga
    29641 ctttgtgttg cttcgattta ttttcaagct gaaatgagtt tattggccaa aattttaact
    29701 cctcaagaac ttaaactcgc taatgaaatg cacagtgtca tttgggcgat ttcttataca
    29761 gcaggtatgg caagtgcggg aatttttatt tattttctag gagttaaaac cgctttttta
    29821 tttgactgta tgcttatact cataggcatt tcttttttag taagattaag cattcctgat
    29881 tttcatcaca aaacacaaag tcgctttttt actatgataa aagaaggatt tttctatgtt
    29941 ttaaataata aaataatttt tcatcttatc ttgcttcacg cttttatagg tttaactgct
    30001 tatgaaacct tggttacgct tttagcacaa catcaataca aagaagtttt atctgctgct
    30061 ttagtaatag ggtttttaaa tgcggtacgt gcttgttctt tagctatagg gcctatggtt
    30121 ttaagcaaat ttattaataa taaaaattta ttttacatgt atcttggtca aggcttgggt
    30181 attatacttt gggctttaac tcaatttaat ttttatattt cttttttagg tttaattggt
    30241 gcaggttttt ttacctcagc gctttgggct tatacctaca ccatgataca aaaaaatgct
    30301 gacaaagaat atcatggtag agtgatcgct tatacagata tgatttatct tagttttagc
    30361 gctattattt caatgcttat gggcttttta tttgaaatag gcttgagttt aaaactgatt
    30421 acaggtttat tgggtatgat ttttatcttt gcggcatttt attggaagtg gttttataaa
    30481 aaatatttgt gaaaattcac aaatatttta aattttaaac aaatcttgaa gatttttcat
    30541 tgcttcttca ttgctgatgg cattatttag ctgcgatgag cttaattcat tgagctctat
    30601 ttcataacca cttaacatag aagcaaggcg aatattaata ccattttttc ctatggcttt
    30661 gcttttttgt tcgctattta aacttacaat agctttttta tcttcaattt ttacagaatt
    30721 tacaatagcg ggagccaagg cacgagaaat taaaatttca ctctcatttg taaattctat
    30781 acaatcaata ttttcattat gaagctcttt gcttactgca ttaattctta cacctttaac
    30841 acctactgta gcacctacag gatcgatatt tgctccattg gcctgaagaa tgatttttgc
    30901 tctttcacct ggaattctag cacatcctat aatattgaca taaccatctt tgatttctgg
    30961 aacctcagct tcaagtaaac attctaaaaa tttaggactt gtacgactaa gctcgatttt
    31021 aataccttta tctgtataaa cacggcgtat cacagctttt accacatcac ctattttaaa
    31081 tttttcccct ttaatgcgat tttttctcgg taaaaaagct cttaattcat ctatttcaat
    31141 aaaagtattt tcttcattat ccactctaac aactgtacca aaaaccattt gccctacttt
    31201 gtttttatat ttttcaaaaa tagtttgttc taataatttt tgtatatgat attcaagttc
    31261 tttatgcaag gtatttaccg cagttcttcc taaattttcc aaagaacatt cataggttaa
    31321 ttcatctcct atttcaacat ctggagcttc tgattttgcc ttacttaacg cgataaaact
    31381 ctcactttta ttttgcaatc tctcgtcatt atctgctact atggtaattt tttgataaag
    31441 atttaaattt ttaggatcca caaaaaactc atattcttgt ccataaattc tttttgcagt
    31501 attgattaaa gcggtagcta ccttttctct tacattctct aagtttaaat ttttttcatt
    31561 agcaatagat tcgataatat ctgctatctt ttccatattt tataaaacct tttttgtggg
    31621 aaatttaaaa atgtagataa aaattatatc cttaataagt ttaattaaaa gtaaaatttg
    31681 ctaaaattat agattaaaat gaaaattctt aaggatttag ctatggaatt aaaattggca
    31741 agaactttga ttaatgaaaa acctaaaaat attagcctag aaaaaatcga agaggctata
    31801 gaaaaagaag gacaaaagtt tttttatttt gataaagata atacacacaa acaactcatt
    31861 gcccttgtaa atcattttga aaaaaaagga gtaagcattt atcatagaac cgtaaaatac
    31921 ggacttgatg ataatgattt tatgtatgag gtacatattc tttgagtgct aaaaaacttt
    31981 ttatccaaac tttaggttgt gcgatgaatg tcagagattc tgagcatatg atcgcagaat
    32041 taacacaaaa aggaaattac gcactaacag aagatatcaa agaagcagat cttattctta
    32101 ttaatacctg ttcagtgcgt gaaaaacctg tgcataaact tttctcagaa gtgggtggct
    32161 ttgaaaaagt taaaaaagaa ggtgctaaaa taggagtttg tggatgcact gcatcacatt
    32221 tgggaaatga aattttcaaa cgtgctcctt atgtggattt tgttctaggg gcaagaaata
    32281 tttccaaaat cactcaagct ataaaaactc caaaatttat gggcgtggat atagactatg
    32341 atgaaagtga atttgctttt gcagatttta gaaatagtat ttataaatcc tatattaata
    32401 tctccatagg ttgtgataaa cactgcactt attgtatagt gccacatact agaggagatg
    32461 aaatttccat accttttaac atcatctaca aagaagctca aaaagctatt gaaaaaggcg
    32521 ctaaagagat tttcttgcta ggacaaaatg tcaataacta tggcaaaaga tttagaaacg
    32581 aacataaaaa aatggacttt tcagatcttt tagaagaact tagcactata gaaggtttgg
    32641 aacgcattcg ctttacaagt ccacatcctt tgcacatgga tgataaattt ttagaagttt
    32701 ttgccaataa tccaaaagtt tgcaaatcca tgcacatgcc tttacaaagc ggctcaagtg
    32761 aaattttaaa agctatgaag cgtggctata ctaaagaatg gtatttaaat agagctttaa
    32821 aacttagaga actttgtcca aatgttagca tttctacaga cattattgta gcttttccag
    32881 gggaaagtga aaaagatttt aaagaaacta tggatgtttt ggaaaaagtg cgttttgaac
    32941 aaattttttc ttttaaatac tccaaacgcc ctttaacaaa agccgcaacc atgcctaatc
    33001 aaatcgatga agaaacagct tcaagaagac ttagcacctt acaaaatcgt catagtgaaa
    33061 ttttagatga aattgtaaaa aaacaagaaa ataaaacttt taaagtttta tttgaagaat
    33121 taagagtagg caatagcatt gctggaagaa cagataataa ttttttagtt caagttgaag
    33181 gtagcgaaga acttttaggg caatttaaag aagtaaaaat aactaatgca aagcgtatgg
    33241 ttttatatgg ggaaatcgtt taaaatccat tgcttaacat atataatttt catcttacaa
    33301 tggcttattt ttttaagctg taaaaagcac tataaaggtg aaaaagttga ccgtaaagct
    33361 ggtgtgatac ttttttggca tggaaaatta gcactcatgc cttttgcgtt tagacattat
    33421 agacaaaaaa ataaaaaagc ctatgtcatg atctcccacc ataaagatgg agaacaaatt
    33481 gcaaaaatca tcaagctttt cggtcttgat actgtaagag gaagcacttc aaggggtgct
    33541 agcagtgcac ttagagctgc atttaaagtt ttagaacaaa atgacgatat agttatcacg
    33601 cccgatggtc cacgagggcc ttatcatagt atttcagatg gttctatcat tttggctcaa
    33661 aaaaaagaac taaagataag aattttaaac tatgaagcaa atcgtttttg gaaatttaaa
    33721 agttgggata agatgatctt gccaaaacct tttagtaaga ttacttatag tctaagtgaa
    33781 cctttggata ttttatcttt agataaagaa aaagctaaag aatttctaat gaaacaattt
    33841 gataaaatta gcttagctga tcaatttaag gaatgaaatg ttatttttac ttaaaaaaat
    33901 atttccacaa ctttttatta gtattatttt agaagataaa aaaaatattg taaaagcttc
    33961 tatttataga ggaaataaac taatcagtag caatgaaaaa acttttgata aaagtgaaaa
    34021 tttattagag tacataaaaa atttaagcaa gcatttctta ttttaccaca ctgctttatt
    34081 tttagacgcc aaagaacaag gattaatacc tagtacaaat attcaagatt gtgagcactt
    34141 taatataaga aaaatcagct tacagcatat tttgcttaat aatgcccttg tttatacggc
    34201 taccgaacat gtagaatatt atagcgagct ttttgaagaa tatagaggtt tagatttttt
    34261 atattcccct tttgctcttc tttactacaa tatgcaaaaa gaaaaacagc ctgatgatca
    34321 aattttactt tatggattta agcaaggata tcttttggca attattgttg ctaaaggcaa
    34381 tactatttta tacggtgatt ttaaaatatt tgagcaagaa ttaggtttag agcttgaact
    34441 tccatcagaa gataatcaag aaattgaaaa caacaacgat gatactgaag ttaccttaga
    34501 taacttcaat gaagccttaa ataataaatt tgatctactt gatcaagaaa ataatcttga
    34561 aactttggat aataatgata attttaatct tgatgaatta aatcaattta gcaatgatat
    34621 ggaactttgc cgttatatta ttacgagcat tgaaaaattt tataatgatg ataaatatgc
    34681 tggggtattt atcaatggta ttttattata tagcgaatca gatattaaca taaatgctat
    34741 tgatttttta gaaagtgaaa cttttttaga gataaaaacg aaacaaatca acaccttaga
    34801 tcttatgata gaattgatgc gaaaggaggt taaatgactt atagctttat acagccaaga
    34861 aaaaaaccta ttttcacact ctttgataaa atttggctag gactttttgg ttttagtata
    34921 ttatttatct tactagtata ttttacatat acaataaaaa ttgcattaat caatagctct
    34981 atcgatgatg aaaaacaaca agttatagtg cttcaaaatc aaactaagca aaatgaaatg
    35041 ctttatgaaa ttttatttga tcaaagccaa atagcgaaaa attttaacac tcaaaatcaa
    35101 attgttaaag aaagcttaag aaatctattt gatattattg taaaaactga taatattact
    35161 cttgaaagtg ttgaacaaga cgaatattcc ttaaaactta tcggagtcac tcctacaaga
    35221 gaaatgttta ctctactttt agaaacccct ttaaaaagca tctttgatca aagctacaca
    35281 acctattatc gcttagataa tgggtggtat cgttttgtta gtattagcaa acaaattcca
    35341 ggagttgcag atgaaagata aaagcctaga agaaattgat ttattaaagc ttatcatttg
    35401 cgcgttaagt tttataagcg tttgcacagc cttgatctta tttttacttt taccgacatt
    35461 aaaaaattac aaacaagcaa atcttagaga aaattcacaa cttgctatct taaaagctgc
    35521 taaatcaaaa tttgacttta gcgaagataa aatatcaact ctaagaagcg aaaacaacaa
    35581 aagtttagag caatttgagc aaaattttaa tataggaaat tttaatattt ttttacaaaa
    35641 atattttcaa aatgtaaaaa ttcaagaaac taagcccgaa aaacaagaaa aatatctaaa
    35701 aaaccgctta gccattaaag cgacaatgaa taatcctaga agactttatg attttattga
    35761 tgctctaaaa aactataata atttaatcaa gcttgattat ccacttaatc ttaaagcagg
    35821 agagcaaggt atctctatag atcttactct caaagtttat tcaagctaaa ctcacatctt
    35881 cgccttttaa aatttgattc atagtattca ttgcacacat ttttccacac atggaacatg
    35941 agtttaaatc atcagggcga cgctcattaa acattttttt agccttttct ccatcaatag
    36001 caagtttaaa cattttctcc caatctatct cttgtctagc cttactcatc tcatcatctc
    36061 ttgctctttc ttttggaagt ttagctatat ctcccgcatg agctgcaatt ttagtcgcaa
    36121 ctataccctc tctaacatct tctaaatttg gaagtcttaa gtgttcagca ggtgttacat
    36181 aacacagcat atcagcaccg ctagctgcag ccacagctcc tccaatagca ccactaatat
    36241 gatcataccc tgcgccaata tctgttacca aaggtcctaa gacataaaaa ggcgctcctt
    36301 tgcataaacg cttttctaat tgcatatttg cctctatttc attaatagcc atatgccctg
    36361 gaccttctat cattacttga accccaacat cccaagctct ttgagtaagg agtgacaatt
    36421 ctataagctc tgaaatttgc gccgcatcac ttgcatcgtg agtagagcca ggacgcaaag
    36481 catcgcccaa agataaagtt acatcgtatt ttaaacaaat gtcaagcaaa tcatcataat
    36541 actcaaaaaa aggattctca gcatctttca tcatcatcca agcataaagc acagagcctc
    36601 ctcttgaaac tatatttgta agtcttttac tttgtttaaa aatatgcgct gcgcgagaat
    36661 taacacctgc atgaattgtc ataaaatcaa ccccactttt agcatgatga tatacaacat
    36721 ctaaaaagtc tttagcacca atttgtttta aatctttttc taaaaatcct accgcatcat
    36781 atacaggaac tgttcctatc atagcttttg aaacattaac aagctcgtct ctaaaacgac
    36841 ttgttttgcc ataattgctt aagtccataa tcgcttctat gtcaaattta tgagcaagct
    36901 ctactttttt catttcctcg ctataatcaa cgcaatcatt tgaaactcct aaatttacat
    36961 taaccttagt acgcagtcca aaacctatac catttggatc aagactttta tgattaatat
    37021 ttgcagggat aataatttta ccgcaagcaa tattttcaag caaaaaatct ttacttaaat
    37081 tttctttttg tgcaacaatc tgcatttctt tagtaaaaat accttctttc gcataattca
    37141 tttgagtttt cataaattta tcctttaaaa aatttggata aatgaagggt gagtataaat
    37201 ttttaaagta ttgaaattta taaatcttcc cgacgctgac attatccaga tccggttcgg
    37261 tctaagcttt tagcttactc tcagcctgtt acacaagctc ccgtcattta tgtcttaatt
    37321 atactcttta aatatttatt tttgctttat gcgtggcagt ctttgtaaaa tttataagtt
    37381 cttctgtagt ttttatatga tagggaagtt ttccaaggca atatttaaaa atttcagcag
    37441 ctgccaaagc atcatctaag gctctatgat gcgtattttc cacgcccaga aattctttca
    37501 aaacctctag tttatatttt ggactttcta tacaacattg tgcaaattct atagtacaaa
    37561 tacgacgatt aagtaaaatg ccaaaaccac actcatttaa agccttagaa ataaaactat
    37621 aatcaaaacg cacattatgt gctacaaaaa tactgtcttt taaaaaaagc ctaaaatcac
    37681 ttaaaacctt tgttaaactt ggagcatttt ccaccatctc ataagtaata cccgtaagtt
    37741 cggttatatt ttctggaatt tcttttactt taacaaaact ttgaaagcgt ccaatttctt
    37801 tagaattttg aatttttact gctccaattt ctaaaatttc ccccttactt acaccgccag
    37861 tactttctat atctactata caaaaaattt catctttaat ttttgttgtg cgtgttttaa
    37921 ggataaaaat attatcttta ttcaaagtta agcccaaacc caaaagctca aaagtttcca
    37981 aatctaaatc aaaatttttt aattcttcaa ctttggcaaa ctcttgcatc acccaatcat
    38041 aaggcttgct ttgcttgttt aatatagaaa taatctgatc aatttgctgt aaactcaaaa
    38101 ttcaagcttt aaagatgaaa ttgcagtttt ataatcatta gaagaaaaaa tataacttcc
    38161 agccaccaaa atatcagctc cggattcctc taaatcgcta gcatttaaac cattaacacc
    38221 accatcaacc tctataaaaa ctttagcatt ttttttatca atcatttggc gtaattcttt
    38281 gattttttca tgtaccaaag gtaaaaattt ttgtccacca aatccaggat taacactcat
    38341 taaaagcacc atatctacaa attctagcat gtgtttaata gaatcaatag gagtgtgtgg
    38401 atttaaaaca atagcaggat ggattccttg acttcttata tattcacaaa gccttatagg
    38461 atgaacttcg ctttccatat gaaaagaaat gaattttggt ttcaaaggga taaaaagatc
    38521 tataaattta cttacatctt taaccatcaa atgcacatct aatggcaact tactaatagt
    38581 tgaaattttt tcgatcacgc aaggtccgaa agtcaaattt ggaacaaagt gtccatccat
    38641 tacatcaata tgtaaaagat ctgcacctgc agcttcaata gctttaactt cttcttctaa
    38701 tttcaaaaaa tttgcagaca ataaacttgg agctacatac atgatcaaaa ccttaaacta
    38761 tatataaatg tgataaataa tattttatcg acttatatat taaaaaaact ataaattatg
    38821 gaatatttta agcttaattt tgatagaatc ttcatttaaa aattttcata aggacaagaa
    38881 aatggcaaga gtatgtcaaa tcacaggcaa gggtccaatg gtgggtaata atgtcagcca
    38941 tgctaacaat aaaacaaaaa gacgcttttt acctaatctc agaacagttc gtgtaacttt
    39001 agaagatggc accacgagaa aaatgagaat cgcagcttct actctgagaa ctctaaaaaa
    39061 acaaaattct aaataatttt gaggatttat tcctcaattt taaaatttcc aatttaaaaa
    39121 taaactttaa caaatcactt atataacaca catttaaaaa ttattattaa ttttattatt
    39181 ttttaagcca aaaatatctt ttaatagtgt aaaatacctt gttaaatgaa ttttaaattt
    39241 cactaataca aggagagttt atgctacatg aatatagaga attaatgtca gagctaaaag
    39301 gtaaagatgc tcattttgat aaactatttg atcgtcataa tgaacttgat gacatgatta
    39361 aagatgcaga agaaggtaga acttctctta gcagcatgga aatttcaact ttaaaaaaag
    39421 aaaagcttca tgtaaaagat gaacttagcc aatatctagc aaattataaa aaataaggca
    39481 aaacaatgtt tggaagtaaa ataaaccatt ctgatcttca aaaacttgaa gaagaaaata
    39541 aaaatcttac acataaaatt gaaaaatttc aatcggaaaa tttagaatta aaaaataaaa
    39601 ttacatcatt agaacaagcg gctttagagt ctaaacttaa aacagatctt ttaaatgttt
    39661 tattaactgg tgttttaaaa aatattacta ttgttcaagg cgatatgtta gaaaatgtaa
    39721 ataaggcaga agttatctct agctattcta aaacttctct tgctgaaatg gataaactta
    39781 accatattgc taattctatc aatgcctctt tgggaaatat tacagaatca gccaataaaa
    39841 caagagatgt tgcaggaaca ttgcatagaa gtgtagatga aattactaat gtaattaatc
    39901 taattaaaga tgtttccgat caaaccaatc ttttagctct taacgctgct atagaagctg
    39961 cacgcgcagg tgaacatggg cgtggttttg ctgttgttgc cgatgaagta agaaaactag
    40021 ctgaaaaaac acaaaaagca accacagaag ttgaaatgaa tatcaacctt ctaaagcaaa
    40081 atgcaaatga aatgtatact caaagtgagc aagttgaaaa aatttctata gattctaatg
    40141 ctcatattat gagtttttcc gaaaaattta ctcacttagt aaatgaagca cattctacta
    40201 attcaaatgc agttggtatc gcttcagaag ctttcgtatc tttagcaaaa ctagatcata
    40261 tagcttttaa attaaatggt tataaagaaa ttttttccaa atcaggaaag caattagccg
    40321 atcatacatc ttgtcgctta ggaaaatggc ttgctagcac aggaaaagaa agatttgggc
    40381 aaaataaaag cttcttaaaa attaacgagc cacatgaaaa agttcatgaa aatatgaata
    40441 atgctataac aatagcaaat acagaagata ttagcaaaga tattacccaa cacagcataa
    40501 ttaataaatg cgaagttgct gaaaatgcat cgcttgatct tttcaatgta ttcaaagaaa
    40561 tgcttgatga gtcagatcat taaaatccta ggttgaacct ttttaaggtt taacctaaat
    40621 aatctttaat tttccccact tctcctttaa aaaccacata taagcaaaat caagcaaagg
    40681 cgttcttatc atatttttac attttttttc aaaatcctgc accttaacat aaacagcttc
    40741 aatctcctca tcatcaactc cacctccaga agaaatttta tctttttcat caacttctgc
    40801 gaaataaaag ctttgcttgc ttacacctga accaaaccct gtataaaaat ctcctatttt
    40861 ttctaaattt ttaggagcat atcctagttc ttctatgcat tcttcttttg ctatttcctc
    40921 taaagataat tttttatcca caagcccaga acaaagctct atagtatagc ccatattatc
    40981 atcttttaca taatctttat catgcatttg atgataccaa agtggtatac gaaattggcg
    41041 tacaaaaata aaactttcta attctttatg atacaaaagc actgaaacac tatctttaga
    41101 ttctataaaa tcccaagtgc aaagcctacc attactttca taagcaaatc tcttaggctt
    41161 aatataattt gatttttcaa aagaaagttc ttttaaattt ttaaacgcca taataaaacc
    41221 ttttatttat ttttcacatt gtactttatt tttgcttttt tgaaaatata aaggtgatta
    41281 aagccttaaa aaattaaaaa tcatatttat aacttaacca aaaacttctt ccttctgtat
    41341 aatcttgata gcgatttgca tatccagcag gattagcccc accccatctt gtaacttgcg
    41401 gatcaaagaa atttttatca aaaagatttt gtactgcaaa acttaaacta gattgcttat
    41461 tgattttata atttatccct aaatctacta tataaaaagg cttatatttt tgccatggca
    41521 gactacgatt accgccacct tttgctttag ctatagtatc aagtcttgct cgtgttttta
    41581 tataagaact aaatttacct cgctcatagt ttaattttaa cattgctata tgtcttggta
    41641 aattttctat tctatcacca ccaaaccaat ttttttgacc atctttgtag cgattatcca
    41701 taaaagtata acttgaattt aggctaaagc cattgtaagt tttggtatta aatgcaaatt
    41761 ctataccttt agtctgtgtt tttccaagat taataggacg cttacaaaca atgcctttgc
    41821 tacaattaat atcattttgc atacctgtta aatcttcact actgatttga tttgtaaaat
    41881 cagtaataaa tcctgtaata gaataatgtg caaaatcaaa taccctaaaa tcaacaccca
    41941 attcataatt tatactttct tctggtttta aatcagggtt tccaaaataa gcattattat
    42001 tggcataatt ataatatcca tttgtcaact gcttggcagc aggagtttta tagccttttg
    42061 aaacaccccc tttaaaggct atattatcat ttaagcgata aaccaaataa accctagggg
    42121 taaattcaga atcaaacaaa tcgctataaa tataacgcaa acctgtagta aaaatcaaat
    42181 catcggttat aaaatactca ttttccccat aaagtgcaac cgtggtttga tcaagatttt
    42241 tacctcttat ttgactacct gcacttgctt gatcattttt taacatctca taatcaatcc
    42301 ttgcaccaaa ggtatttact aaattaccgt attgacctaa attccaaggt aaaacaacct
    42361 taccttctcc tacccaaatt tgactatgta actccttatc cttagtgcta ccatattgta
    42421 aatatgagtt agttgaacca aaatcataat ttccatcatg atttaaaaca acattatctt
    42481 taaacagttg cctttcactt ttaatagccc tactacttgt agaattcacc gaaatttcat
    42541 taatatatcg ctctatatca aaatatatat tatttttatc atctactgtc caattaagcc
    42601 tagaaccaaa acccaagcta gtaaaagcac ctggactatg actagcaatt tggtaattat
    42661 caggtctttg ttgactacta tcccaaaccg gtgtaggcca ttttaaatca gaagctgcct
    42721 tatcataata cttcaacctt gcagaaattg ataatgtatc ttcaatcaaa ggagttgcta
    42781 cataagcatt aaatcctcca gcatttccat agtgattaga gtgctgttgt aaaagagtat
    42841 taaattctat atttgcttcg attttatcag gatttttctt agtgataata tttatcacac
    42901 cgcctacagc atcactgcca taaagtgtag aagctggacc acgtataacc tcgatacgct
    42961 ctatcatgtt taaaggtggt agatatcctg actcactgcc actaaaacca ttatcataaa
    43021 acccatttgc aacactttga cgttttccat caattaaaac tagagtataa gaactaccaa
    43081 aacctcgtat gctaaaatca taagtgcctg ttttattcat agtcacatct acacctggaa
    43141 tatctcctat agcctcccct atatccttaa ttggcttttt ttcaagctct tcttttgtaa
    43201 tgatagaaat actagcaggc gcatcaacca aatcttgttc aaaaccacta gcactaacca
    43261 caacatcatt aagttgatat ttttcttctg cttttaacaa agctccagat aaaattaaaa
    43321 aacacagtaa acttttttta aatttcatat ttttaatttg agtcaaatta attcctttaa
    43381 aaataattat tttgatattt aaaatcattt ttgaagtata aaaaaagaat acttttaatt
    43441 aacttaattt tgataacaat tataaataat aaaattattt aaaaaagcga agtaaaagcc
    43501 taagcctctt gataggctcc aagctttaaa attttctgca tacgatttgc agaaagttct
    43561 cgtacgtcaa tattttcaag ttcatttaga gattttttta cataatcagc aatagctact
    43621 gctgcagctt ctttattacg atgtgcacca tttgtaggct catctataac atcatcaatt
    43681 aaaccttgag attttaaatc atcagccgtt accttcatag ccttggttgc agcttcactt
    43741 tttgcaggat cattccaaag tattgcagca caaccttcag gagaaattac tgaaaaaaca
    43801 gaatttttca tcattgcaag tctatctgca acccctatag ctaacgcccc gccactaccg
    43861 ccttctccga taactatagc aatggtcggt attttcaaat cacttaattc atataaattt
    43921 ctagcgatag cttcactttg ccctctttct tcagcaccta ttccaggata agcacctgga
    43981 gtatctatca aaaataaaat aggaatttga aatttctctg caagtcttgc tactcttaag
    44041 gctttacgat atccttcagg atgtggcatc ccaaaatttc tagcgatttt atcttttgtt
    44101 ccacgtcctt tttgctcacc aattacaatt atttttttct ctcctaaata acccataaaa
    44161 caaacaatag caggatcatc tctaaaggca cgatcaccat gtatttcatg agcgtcattt
    44221 aaaataagtt caatatagtc aagagcataa gggcgatctg gatgacgcgc taattgcaaa
    44281 cgttgaaaat cgcttaaatt cttataagtt ttagaaattt ctttttcaag atttttcttt
    44341 aaaatcgata cagcttcagt atctccttta atctgagcat tgacaatgtc ttcatcaatt
    44401 tgctgaatat ttttttcaaa atccaaataa gaagccatat taatctactt ttttaaatac
    44461 aacgcagcca tttgtgccac caaaaccaaa agaattactc atcaccactt ttaaatctac
    44521 ttttcttgat atatttggaa cataatcaag atcacattca tcatctttta caagctgatt
    44581 gattgtaggt ggaactaccc catctcttaa agccataaca ctaacaactg cttcaattgc
    44641 acctgcagca cccaagcaat gacctgtttg tcctttggtg gaacttataa gcgggatatt
    44701 attgccaaaa agctctttaa ttgctgctgt ttcatttttg tcatttacag gggttgaagt
    44761 tccatgtgca ttgatataat ctacctttgg attccctgcc atatttaaag cttttttcat
    44821 agctcttaaa ggcccatcta aagttggtga agtaatatga tgtgcatctg cactttctcc
    44881 aaatccaatt aattcagcat aaattgtagc accgcgtttt ttagcctctt catattcctc
    44941 aaaaactaaa gctccagcac cttctcccat gacaaaacca tctctttctt tgtcaaatgg
    45001 tcttgaagca tgctgtggat cttcatttct agttgataaa gctttcattg aagcaaaacc
    45061 acctataccc acaggacaaa tcgcagcttc tgcacctatg actaacatct ttttagcatt
    45121 tcccaaagct atacttttat aagcttctcc tatagcatga gttcctgctg cacaagctgt
    45181 aacacaagaa atatttggcc ctttaagtcc atgctctata gaaatcaaac ctcctaacat
    45241 atttacaagc gctgaaggta tgaaaaaagg ggaaatttta cgcggacctc gctcggaaca
    45301 aataatggaa tttttttcta tgttaggcaa acctccaata ccagcagccg aaacaatgcc
    45361 aaattcttct ttgtctaatt cttcgttaaa tccagcatcc tgcattgctt ctcttgctgc
    45421 tttaattcca agttgtatga aacggtcaat tttttttact tctttgccat caacaacctc
    45481 taatggatca aaatttttaa cttcagctgc aatttgaaca ggaaagtctg tggcatcaaa
    45541 aagagtaatt ttatttactc cgctttctcc attgcaaatt gctttaaatg aactttcttt
    45601 atctaaacca agggcattga tcataccaat acctgtaact acaactcttt tcaagaataa
    45661 gctccttgca agaaaaaaat tattttttta gattgtcaat ataatttaca acatcttcaa
    45721 ttttaattaa tttttcagca tcactatctg gaatttctac ttcaaatttt tcttctaaag
    45781 ccataataag ctctacaaca tctaaagaat cagcacctaa atcttcaata atttttgatt
    45841 ccattttaac tgcatctgca tcaatactta attgctctac tactactgct tttacatcat
    45901 caaatgttgc catttgttct ccttcaaaaa attaaaataa agcgtatttt actataaaaa
    45961 gcttaaaata tttatagttt ttcattatac ttgaaaataa aatattaaaa cataaaggaa
    46021 aaataatgct tttctctaat ttaatcaaag aaaatcaaaa aatttggaat gcttatctac
    46081 atcatgattt tgttaaaaaa ttggaagata aaagcctaaa gcaagaaaat tttctttttt
    46141 atctcaagca agattatatt tatttgctta attacgcaaa atgttatgca agattagcac
    46201 ttaactcaaa tactgcaaaa gaacttcgtt ttgctatgaa atttcaaaat tatatagttg
    46261 aaggagaaat ggaacttcat cgtgcaattc tatctcttgg cattaatgca gatgaactcg
    46321 atgcaaaaga tgaaagttta gtcaatatag cctattcgcg ttatatgtta agcgtaggtg
    46381 aaaatggaga ttttttagat atgctagttg ctcttagtgc ttgcgctata ggctatgcaa
    46441 aaataggtgc tgaaattata aatcgtttaa aaaatgaaaa tttaaaagat catccttaca
    46501 aggaatggat tttgacctat ggaagtgaaa attttcaaaa tgaagctaaa gaatttgaag
    46561 attttgttaa ttcttatact tcaagtgtta gtgcacaaaa attccaaaaa ctcagcgaaa
    46621 tttttcatac tgtaacacgc ttggaagtgg ctttttggga gcattcttta agaatggaat
    46681 taaatcttta aacatgggct ttttgcccat gtttttatgc aattttactt gcatcaataa
    46741 tattataatc taaaccaacc atttctttag aaagtcctaa tgcaagtcct actaattgtg
    46801 ataaatgaat aataggcaat cttgctttag aattagtata atcttgaaat ctttcttgat
    46861 agatatcaag ctgcatttga caaagtggac aaggtgttac aacacaatca gcttgatttt
    46921 cacttgcatt attgacaatt tgactagaca tttttttcac agatttttct gcaggataag
    46981 aagcatgaaa accacaacaa tcaaggcgtt tttcaaaagg aactatttta gcccctaaaa
    47041 cttctactac actttcaaaa ctttttggat tggttgaact ttctttttta ccgaaagcat
    47101 cttcaggtct taaactatgg caaccataaa ataaagctac ttttaaattt gaaagcggct
    47161 ttttcacctt gctttttaaa ttatccaaat cctcataaag ctcccacaaa agacttgtaa
    47221 taggcgttga accttgatat ttcattccac cttgtgctaa aaaaatattg atgcgttctt
    47281 ttgcaccctt atcaagagta ttttttgttt tagttaaagt tagcatacaa gtactacaag
    47341 ttgtaagcat tggcattttc atctcttctg ctaaagcaat atttcttgca ttagctacca
    47401 aagtcgcaat aggatcaaca cactgcgctt gagaagcccc acaacaactc caccccttaa
    47461 tttcattcaa cttccaaccc aaaataggtg caatagcttc aagtgaaatt ttagattctt
    47521 ttgcagcttg agataaaaca caacctggaa aaaaagcgta ttctttttgc atattttact
    47581 ccttaacagc agcttcttgt gccgccttta tcattttaac caaatcttta tgaccttcta
    47641 tttcatcctc gccaaaaaca tgcataggat tcatttttcc tgcacacata agtttaaaag
    47701 ctatatctgt tttacccata gaacctataa caccctcaga acgcaaagca agataaattt
    47761 cattcaagcg tcctgaacct tcaactaaat ctttataaaa agcttcagca tgatcaggtc
    47821 ctaagccttc atttaaacct tttttaatcg ccatcactct taaatttgct atatcactta
    47881 ctgaacttat accctttgga caacgatcag cacactcttg acaatgaaca caaagccaaa
    47941 gtccattcat tacgctgggt tttacatgca acataggatc cttacctcga gagtccgctg
    48001 ctgcacgcca agcatgagta aaaacaaaag gttgcatata atcgctacta tctgcttcta
    48061 atttattaca ctctgaagca cagctaccac ataaaataca atcccattgc ttgctaatac
    48121 gatcaaattc ttcttgactt tgtttacaac ccttttccgc tgaaaattca ttttttgcca
    48181 ccatagcagg acgaattttt cttaaatttt ctatagaagg ctcccaatcc acaattaaat
    48241 cagaaattac tctaaaattt ccaagcggag aaatgcgtat acttgaagga ttatcatatt
    48301 cttttaacaa atcttgcatt ttagtatcac aagcaagata agaatgccca ttcacacgaa
    48361 ctgcacaagc cccacaaatt gcagattgac aagaggcggt aaaatttaaa gtaatatctt
    48421 ttgttttttt gataaaaagc aaaagagaga gcagagtttt tccttgtata tccttatcat
    48481 caatatcata actttgttca tatttttcct tgccattaaa acgatctatg atgattttca
    48541 ttgtactctc cttccatcaa gtgaaaactc agttaccacg acatctttat aactaagttt
    48601 taattcatca ttttccaaat ttacaatgct atgttttaag aaatttttat catctcgctt
    48661 tggataatct tctctagtat gagccccacg actttcaagt ctatttctag ctgccaaaca
    48721 agcacagcga gaaagtaaaa tcaaattacc aagctctaca taatctgtaa aagcagtatt
    48781 catcacttca ttaggatttg gaatacgaat tttttcatat cttgcttgta tatcttctaa
    48841 attttttgct agaagatcga gtttttcttg agttctaaaa atccccatat tatcccaatt
    48901 ttgacttccc aactcttctc gcaattcata catttcttga ccatttccgc cattatttgt
    48961 aatttcttta aatctagcct gccatttttg agcaagttca tgagtttttg ccccttttcc
    49021 aaaacttgca tctttagcat aatttgtcgc accaatgcct gctaaatacc ccgttacaac
    49081 tgcatcggct aaagaatttc cccctagtct attagctcca tgtatagaaa tacaagaagc
    49141 ttccccacct acataaattc cagcaatttt agtactcata tcttcaaatt tagccacttc
    49201 aattccaccc atagaataat gcgccgttga acggataggt acaggagtat ctactaaatc
    49261 aatattttca aaaagcattg cagtgtgacg aatttttggt aaatctttta aaattttttc
    49321 ttttcctaag tggcgtacat cgcacaaaac ataagctcca agtccctcgc cataacctct
    49381 accttcacga atttctgttt ctatagcacg cgcaaccaca tctcgcggtg caagctccat
    49441 tttttcatgg taatttttca taaaacgctc accacgatta tttaaaagat atcccccttc
    49501 accgcgcgcc gcttctgtaa taagagttcc accatttgca actcctgttg ggtgaaattg
    49561 tatcatctca ggatcttcaa aaccaagtcc tgctctaaga gcagctgcca caccatctcc
    49621 tgtggcaata aaaggagttg aagttctatt ataaaatatc cttgtgtatc cccctgtagc
    49681 aatcaccaaa gctttgcata acacaggata aattccaccg ctttgtatat ctcttaaaac
    49741 gacaccctcg cattttccat ccacaacacc tatatccaaa agttcatgat ccattaaaaa
    49801 tttcacacca ctactaatag catcatctaa acaagaatgc attaaaatat gacctgtttt
    49861 atctgcagaa tagttacagc gtttcttgga agctcctccc attaaacgct gagctactcc
    49921 accttgctca tttcttgaaa acaaggttcc tataaaatcc atattaaaaa tagcctttcc
    49981 agctaattcg caaaatttta aagccgcctc ttgatctacc aaataagctc cgcctttaat
    50041 agtatcataa gcatgtaatt tataggaatc tccattagaa aaatcagtaa ctccattaat
    50101 tccaccctct gccatacaag ttgcgttacg cgatggcatc atctttgtag ctactacaac
    50161 gcttaatttt ggattttctt ttctcactgc ggctgcagca cgcaaacctg ctccacctga
    50221 tccaattacc aaaacatcgc aagaaggtaa atttgtatct ttatccatct tagatgaatc
    50281 atctaaagca taaactccac ttgaacttgc aactaaagct cctacactaa tacaggctgt
    50341 ttttataaaa tctcttctag aaaattcacc catatcattc tccttattta aaaaaattaa
    50401 taataatttt taatgtaagt caatcttaca taaccgcatg ccaaaaatcc aaaaacaaac
    50461 tctcctttca atataaaatg gattaaaaac aaatttataa tttagta
//
LOCUS       DAPIWB010000003        48747 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.003, whole genome shotgun sequence.
ACCESSION   DAPIWB010000003 DAPIWB010000000
VERSION     DAPIWB010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 48747)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 48747)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..48747
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.003"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            84..755
                     /locus_tag="RJ266_000108"
     CDS             84..755
                     /locus_tag="RJ266_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDV7353896.1"
                     /translation="MINVLMIEDDPDFAQLLSEYLAQFNIKITNFENPKSALNVGIQG
                     YDCLILDLTLPGIDGLEVCREIRQKSNIPIIISSARGDLSDKVVGLQIGADDYLPKPY
                     DPKEMYARIMSLIRRTKRVEHTNNENINSAFKIDERRHEITYEDKVLTLTPAEFEILE
                     YLIQQHGYSVSREQLVSRCKNLKDKDSKSLDVIIGRLRVKIGDSSKSPKHIFSVRGIG
                     YKLIG"
     gene            752..1987
                     /locus_tag="RJ266_000109"
     CDS             752..1987
                     /locus_tag="RJ266_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDV7353897.1"
                     /translation="MTKNYSIHTKLIILFVVTFFLVCVLFIVLLKIEGNTYNEEESLK
                     QENLIKNLLISYENTSGVEIGAYLGNSGFNAVQNPNLVKAIRNNGQSLFKAGGELCTL
                     SSLKYHSNLYFDVQCKDFDGLYEENTSDRVYNLLLIGFFSFSLLVVFMYFSVLKSLEP
                     LKKLRRQVAEVANGEQPNFLDYQEDEVGKIAFEFQKAFKKNQELIQSRQLFLRTIMHE
                     LKTPIGKGRIISEMIKEDRQKERLIAIFLRMDSLINEFAKIENLFSKNYNLHFKPSRF
                     STILEEAKEHLMRDDFNKVVKVDIRYDALINVDMEIFSVILKNLIDNALKYSNNGTCE
                     LFCCKECFTIKNPGKPLAEPIEHYLEAFTREKHNQVKGMGLGLYIVSEVCKLHNFDLI
                     YFYDDGKHCFKIFFGDKEK"
     gene            1987..2559
                     /gene="recR"
                     /locus_tag="RJ266_000110"
     CDS             1987..2559
                     /gene="recR"
                     /locus_tag="RJ266_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HDV7353898.1"
                     /translation="MAKGLEKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKL
                     AHNIENAIRFIKPCEQCGALSENELCEICSDEERNKNILCIVESPKDILTLEESQSYN
                     GLYFVLDDLSEEKLEKLKQIILKLNTSELIFALTHSINSDATIFFIEDKFKGLNLTFS
                     KIAQGIPSGVNLENVDLISLNKAMNFRTKI"
     gene            complement(2556..3092)
                     /locus_tag="RJ266_000111"
     CDS             complement(2556..3092)
                     /locus_tag="RJ266_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HDV7353899.1"
                     /translation="MKFLVLGIGNIMFADEGLGVHLCKQLEKNYKFTHSEFTLDFVDG
                     GTLALQLSYIIARYDRLIVLDCIEAQGASIGDVFFFPYDAMPNKISWSGSAHEIEMLQ
                     TLQYMELAGDLPKTHILACVPKRIEAMSFKLSDELIQGAKIMEKTLLDFLSKEGFTYE
                     KIADFSLRELADISYKNY"
     gene            complement(3089..3781)
                     /gene="cybH"
                     /locus_tag="RJ266_000112"
     CDS             complement(3089..3781)
                     /gene="cybH"
                     /locus_tag="RJ266_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase, b-type cytochrome subunit"
                     /protein_id="HDV7353900.1"
                     /translation="MQNKEEKLQRKAEYEFSIGLRLTHWVRAIAIVILIGTGYYLSYV
                     FQSPISNGEPVNFMQAKYRLVHQAVGFVLIACIIFKVYLFFCDKVSAKERRSVWDIFN
                     IKLWIEQVKFYIFLGKHPHLKGVYNPLQFVTYFFFYLVILGIILTGLILYTHTYHEGL
                     GGLLYHILRPLEAAMGGLADVRTYHRILMWVIMIFVPVHIYMAIFNAVKGKDGAMDAI
                     ISGYKFVKEEQH"
     gene            complement(3792..5507)
                     /locus_tag="RJ266_000113"
     CDS             complement(3792..5507)
                     /locus_tag="RJ266_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HDV7353901.1"
                     /translation="MSQKIIVDPITRIEGHLRVEVVVDDNNVVKEAYAGSTLWRGIET
                     IVKGRDPRDAGFMTQRICGVCTFSHYKAGIVAVENALGITPPLNALLTRTLMNAALFL
                     HDHIVHFYQLHGLDWADVVSALSADVKKASDEAFKYTSNPYATGADKLLEVQQRLKTF
                     VDKGNLGPFANAYYGHPTYRLSPEQNLIVLSHYLECLRIQRIIAQCMAIFGAKNPHPQ
                     SLTVGGVTCVMDLLDPARMGEYMVKFQEVQDFVNRAYYPDLVMAGKAYAHEASVLNDI
                     GVNNLYTFKEFQIGRDEWLFESGIIKNGDLSKVYEVEEDKITEEATHSWYADNEPLHP
                     YDGKTNPNYTGLVDGESVDHHGNNVHSKVFDTKGKYSWIKAPRYEGNPMQVGPLANIV
                     VNYAKGNQNVVPVVDEFLKETGLPLNAVFSTLGRTAARCIEAKIVANNALKAFNNLVE
                     NLKVDQSTCAPYVIDNSKEYKGRYMGHVPRGTLSHWCRIKNGVIENWQAVVPSTWNAS
                     PKDANGVGGSYEQCLIGLKIADVKQPLEIIRKIHSYDPCIACAVHVMDTKGNNLSEYK
                     VNVNL"
     gene            complement(5510..6649)
                     /locus_tag="RJ266_000114"
     CDS             complement(5510..6649)
                     /locus_tag="RJ266_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HDV7353902.1"
                     /translation="MIDYHQIESRLSALEKLPSLKDNDSITKALEKSGFSRRDFMKWA
                     GAMTAFLALPASFTPMVAKAAELADRLPVVWLHMAECTGCSESLLRSDTPTIDSLIFD
                     YISLEYHETVMAAAGWQAEENLESAIQKHKNKYILMVEGGIPMGDTEHFLTIGAHGKT
                     GYELSKMASENALAIFAIGTCSSFGGIQAARPNPSNAQPLSKVTSKTVINVPGCPPSE
                     KNIVGNVLHYLLFGELPALDVYNRPKWAYGLRIHDLCERRGHFDAGEFVHAFGDEGAK
                     QGFCLYKVGCKGPYTFNNCSRERFNQHTSWPIQAGHGCIGCSEPNFWDTMGPFEEPMA
                     SRKFDTVFGLGADSVSDKIGIGVLTLTGVAIAAHAVISSMQKDKE"
     gene            complement(6770..8611)
                     /gene="mnmC"
                     /locus_tag="RJ266_000115"
     CDS             complement(6770..8611)
                     /gene="mnmC"
                     /locus_tag="RJ266_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HDV7353903.1"
                     /translation="MKKAKLIFKDNTPFSLDFDDFYFNSKDGLNESKFVYTHSFEWKN
                     QENFIIAESGFGIGLNFFLTLKRFLETTPSKRPKKLFYISVEAFYIEKEQLREIYQKL
                     EFYEEFKELLEQFLKFYPKAKEGIYRFYFEDCFLDLVFEDIAVLKELDFKADVWYLDG
                     FSPNKNSQMFDENLIFEVARLSKKNTQICTFSSASFLQKNLKKYGFRVEKTKGFRKRE
                     MIKAYLENELEFKDKEAYFSRTFSSLKNKKVAIIGAGISSAVLAYELSLRGFEIDIFE
                     KHLELGKGASGNESGILSSLILKPKVNLGEFSELSFIEASRFYRQILDLEFKGVVEFA
                     HNDLMQERFDMQRENVLFKISKNQAFLEEGGVIFPKKLVKNLFEKSKACIYFNHEFQA
                     YKFENGCFSLKFKNDVVKSDYAVLIYAMGADAKDFVFYDEMKLSKVRGQVTHLKPFLD
                     TPFPLSSKAYICPVKDDLQVIGASYDRLNASLESKEEDDKQNIENIADFMDKNTKLEI
                     IGSKVGFRSYSSDRFMIVGNAYDEAFYKEEYKALLWTKNKEQKPAKMSCNLYFNFAHG
                     SRGFSTSVLAARYLCALINNEPLCLEKKYIHAIHPARFLIRKLKKGL"
     gene            complement(8608..10587)
                     /locus_tag="RJ266_000116"
     CDS             complement(8608..10587)
                     /locus_tag="RJ266_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HDV7353904.1"
                     /translation="MAKIFVFLVFVFTTLFGVYENELANFDKNFIGSKSEVQVKFHHQ
                     LKSLYIQSVINEDEKTKIEILKRLIISSNTLNLDDKSYANELKESGISETSINALRKA
                     VIKDIKVQNISQDTEKSTFEPIKTVQKNEKKSSNEQIKNTEKTNSKTSQAPKSSIVSK
                     AKSDDKIYVLKSSKTNQGVEFELNADLDKDQLKSFALDEKGNYRFISDFDGVLEGGKK
                     EFKFDDYRLVISQFNPKTIRIVVYAKEKIPIDISFKEEKIIFSKETTSQKKTEQVSKI
                     SEKKQDQKTEIKTKVLETKKQDKKTNNEKENQEPLYVLDVDKISNAVVLNLSDDLDEK
                     EIAVFDTKDQKFRYVVSFKGVLEGNRKSFTFGQNVITVTQYNPKTVRVVLSAPKEFKL
                     LKELDNNNLTLGFYIQTTNQNANKKATQSSSKTLNTNYKSGKLVVIDAGHGGKDSGAL
                     SDKKGSLKEKDIVLSTALKLGNELKKRGYKVLYTRSSDKFINLRDRTKYANDKRADLF
                     ISIHANAAPNATKAKSSEGVETFFLSPARSERSKKAAEKENQGDFEEINYFSKQSILN
                     FLNREKIVASNKLAIDVQKNILTQTRKKYKIVDGGVREAPFWVLVGAQMPAILIEIGY
                     ITHPNEGKRIANKAFQDLLVKGIADGVESYFYNNR"
     gene            complement(10587..11678)
                     /locus_tag="RJ266_000117"
     CDS             complement(10587..11678)
                     /locus_tag="RJ266_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HDV7353905.1"
                     /translation="MNLQPLQIGKHTIKYPIFQGGMGLGISWDRLASAVSLNGGLGII
                     SSVGTGYYEERKYASKELNAKPYGSENFYSRKGLQALINNARKVCGDAPLGCNILCAS
                     NDYARIARDACEVGFNVIVSGAGLPTNLPEFTADFPDVALVPIISSAKALKIICKRWQ
                     SRYNRLPDAVVLEGPKSGGHQGFTYEQCLDPNYQLEKLIAPVVEEAKNWGSFPVIAAG
                     GIWDKKDIENAISLGASGVQMGTRFIGTFECDASEEFKSVLLASKEEDIELIKSPVGY
                     PARGVRTNLLNLVDKRMGPKINCISNCVAPCGRGKEATKVGYCIADRLFDAWSGKKET
                     GLFFTGANGYRLDKLISVKELMEKLVNGE"
     gene            complement(11675..12880)
                     /locus_tag="RJ266_000118"
     CDS             complement(11675..12880)
                     /locus_tag="RJ266_000118"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HDV7353906.1"
                     /translation="MDIKKILAEVKRGCAELIDEERIEKLIKNYYEKGENFFIKAGFD
                     PTAPDLHLGHSVVLTKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLI
                     NAKTYETQVFKVLDKEKTQIKFNSTWLNELGAAGIVELTSTFSVARMLERDDFTKRFK
                     EQSPISICEFLYPLLQGYDSVALKSDIEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIM
                     MPLLEGLDGVNKMSKSLNNYIGVTEKANDMYAKILSISDELMFRYYELLSQKSLEEIA
                     QIKKDIEQGNLHPKKAKENLALEITERFHSKEEANNAKSEFDKIHSQNALPSDMAEFE
                     IQGKIWLAKALVECGLESSTSAARRSISANAVSVNSQKVSDEQMYLEQGEYILQIGKR
                     KFAKLKVKE"
     gene            complement(12892..15087)
                     /locus_tag="RJ266_000119"
     CDS             complement(12892..15087)
                     /locus_tag="RJ266_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HDV7353907.1"
                     /translation="MKPIDEELLLEQLIDNVKNCKDLEAAKALLFEICGHDAILEKAV
                     DYCIFCHEGQFRKSGEPYAVHPILVATLVGFLSENKSNILAALLHDVIEDTNCTEEEL
                     REQFGSEVLKLVLGLTKIIEIREDNLISSKSKKSLTKSALTFRNMLLASIEDVGVLIV
                     KLCDRLHNMLTLDILREDKQKRISEETLVVYAPIAHRLGISSIKNYLEDLSFKYLMPD
                     EYKLIDNYINSNNQEMQLGLNEFISKIELLFLSNGFRQGSFEIQKRIKHSYSIYLKMQ
                     RKGIGIEEVLDLLGVRILVEKVSDCYLALGILHTHFNPLVSRFKDYIALPKQNGYQTI
                     HTTLFDAKSIIEAQIRTFDMHKIAEFGIAAHWKYKEDGSVVAPRLDWLTDISMQSINN
                     LENAEDYNAIELYEYAKDSLYVEDVAVYSPKGEIFTLPRGATVLDFAYEVHTKVGLHA
                     KSAYVNRIKVPLLTELKNGDIVRVVTSNDKFYRCSWIDSVKTGKAKASIREFCKQKIR
                     EINLASSINMLSFIFGVDKNRIETWIEKENLARRIRQVATDSAYLKDIVNGLKKYAKK
                     SYWFDKYEIKEQKIGNFTLYCNHKIANVDFDFCCHPKRGDAVLAFVKGGNAIVHHKLC
                     DRADKMIDNNQDMVFIKWDSNIPKSYKLIFSLENKKGVLAEFLAFLAKMQINLLTINL
                     SSDLNSAVDYFEITMEIPDNINPDSVKDRLKSRCKILDFTSLNDAYKEG"
     gene            complement(15071..15295)
                     /locus_tag="RJ266_000120"
     CDS             complement(15071..15295)
                     /locus_tag="RJ266_000120"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HDV7353908.1"
                     /translation="MDKRIEEVAAKALEKMGNDRYRLSLVVAKRAEQLANGATSLVDF
                     DKNKNKLADIALYEIAENKITLEGLVETNR"
     gene            complement(15306..16025)
                     /locus_tag="RJ266_000121"
     CDS             complement(15306..16025)
                     /locus_tag="RJ266_000121"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HDV7353909.1"
                     /translation="MQERKRVLVKFSGEALAGENGFGIENSILKFIASEIKELIKNQI
                     EVGIVIGGGNIIRGVSAAKGGLIKRTSGDHMGMLATVINAIAIQEALESSGLEVRVQS
                     AIQMEAFCETYIMRRAQRHLEKGRVVVFAAGTGNPYFTTDTTAILRAVEIDADMVIKA
                     TKVNGVYDKDPKQFDDAVFLNTLSYDEAMQDNIKVMDDTAIALAKDNKLPIVVCNMFE
                     EGNLLKIIQGDTSLCSTVKNN"
     gene            complement(16077..17270)
                     /locus_tag="RJ266_000122"
     CDS             complement(16077..17270)
                     /locus_tag="RJ266_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDV7353910.1"
                     /translation="MRKNILIFFCFFLFVDISLANAINEKTKSLEENKRIQEQLNKKL
                     EDLASDILNGEKSLKDLSLQIESLNSQTSKLEASAKAQNQELNTLASQNEDLLKSKSN
                     MESKLISLMAKDFAYDLPIPQGYIESEESFVAFEILGSLNKVLNEEIFKISKDYEGVS
                     RLIDDKQAQIKKINDSLKDYNAQLVKLQSLKQKQISEINKQKTDRTIYAKKLDDLQAQ
                     QEELRKTLNQLKIINNKEGANLNKNDTKIVKNNQQIRQLGSSYQGSSVKRYTGKKTIA
                     PLDSFTVKQKFGNYVDPVYNLKIFNENVVLRSNKSDAVVKNVLDGKIVFAKDTSMLAR
                     VVIVEHDNGIHTIYAHLDKIAPNIKVGKNIKKGAVVGRIKNDLTFEVTQKNFHINPLE
                     LISLN"
     gene            complement(17267..18073)
                     /locus_tag="RJ266_000123"
     CDS             complement(17267..18073)
                     /locus_tag="RJ266_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HDV7353911.1"
                     /translation="MKFFKTHLSLILPLLFMMFAFEFILVTNATLKHYEELVNKDYNI
                     IVVSKTELDQNVVKTKVPFFAGLESLDPKGLIDRLKNDVSEKNLKVLKDSLPKFYTLK
                     LNSLPDQNELNSIKNQLLNIVGVSKVETFSKTHDKIYSLLILMKFVFWLFLFIIILLA
                     FVLFLKQMRIWLYEHTDRIEIMCLFGAPFWFRSFMLYKVVVVDCFIAFVILLAFFTQI
                     FDLSIIQESLKAVDIIFPPINFILHLTLIFLATLFICLLCVNTVMFKVKR"
     gene            complement(18060..18725)
                     /locus_tag="RJ266_000124"
     CDS             complement(18060..18725)
                     /locus_tag="RJ266_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7353912.1"
                     /translation="MPNLIQANKLTLGYDELVIKEASFAFKDDDFVFITGKSGSGKST
                     LLKSFYGDLEPISGKLEVCGSLMNKIGNLELLKLRQRIGIIFQDYKLVQEYSVEKNVM
                     LPLMIKGYSKKVCYDQATKLLKHVNLTFKADKLPNQLSGGEQQRVAMARALAHNPKLL
                     LCDEPTGNLDEYSSDIIWTLLKSARELLGTCVIVVTHRIPSNLRVDYRRFNIENGKMN
                     EIF"
     gene            complement(18795..19973)
                     /gene="trmB"
                     /locus_tag="RJ266_000125"
     CDS             complement(18795..19973)
                     /gene="trmB"
                     /locus_tag="RJ266_000125"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HDV7353913.1"
                     /translation="MPNFKSKKIKEINLPYSKDDVEFLWLAKNDNVSLIYTKVQEESF
                     FLQIKKAQNGFVIKGDKHTKPSKIGYLQKALKIFKEGFCEDIINEAFGLKNNALIEKT
                     PFIVDNFDELLSRLQGKIYIEIGFGSGRHLLYQAKENPNVLILGVEIYNPALTQVAKL
                     AKAQNVNNILLIQSDARLLLSVLKSKSVEKIFLHFPVPWDKKPHRRVIGKDFCKECAR
                     VLVQNGRFELRTDSFEYFNFTLEQFLTFPAPKFSLRKNENLEISSKYEDRWKKQEKNI
                     YDLWVWNFNQECKNYELNEFNLSSVEFSKEDLKKIEQNFKNITIKKDDFFLHFESIYK
                     QDENLLLKVAFGAFNKPEHCYLHLDKTIDFAFKEPFKIQENIKAINELKEILKVQFKI
                     "
     gene            complement(19973..21208)
                     /locus_tag="RJ266_000126"
     CDS             complement(19973..21208)
                     /locus_tag="RJ266_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HDV7353914.1"
                     /translation="MMKRFRLSFYLSFLTLLLSACSVSQMNSLASSKEPAVNESLPKV
                     ESLKSLSDMSNIAFEWEPLYNENIKGFYLYRSSDENPDFKLVGTIKDKFQTHYVDTKL
                     EPGTKYRYMMKSFNEQGQISEDGKVIEVSTAPRLEAVPFVQAVTNLPNRIKLIWRPHP
                     DFRVDSYIIERTKGDDKEFKKIAEVKNRLNAEYIDSDLKPNENSSYRIIAVSFNGIKS
                     GSSQVVSSTSKALPPQVEHLSASTDGSSKIILTWDAPTYEDFSYYKVYSTSSSFLPFS
                     VLAKTDKNSYEDIVEGAGKSKYYKVTMVDKDGLESPMPKDGVEGKTLGNPLAPSIILA
                     QSTSEGINLEWSDNDTRAVEYEVRRYGGEQNAVFKGIKEKRLKDVKALPGVEYSYEVI
                     AIDSAGLRSEPSSKVKAAQ"
     gene            complement(21153..22121)
                     /locus_tag="RJ266_000127"
     CDS             complement(21153..22121)
                     /locus_tag="RJ266_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDV7353915.1"
                     /translation="MQTFLVDENSRLDVFLAKKLNQSRNQIALLIEKDCVQVNDKIQD
                     KNSFKLKNGDIISIASLKLCNEIKPQFEVDFDIDVLYEDEDLLVLNKPSNLVVHGASS
                     VKNATLVDWLIEKKYTLSNLGGEIRAGLVHRLDKDTSGAILIAKNNFTHQKLSEQLAD
                     KSMGRIYLALIDLPLKEDKIIVEKFLMRSPSNAIKKIAIDKENKFSKNAKSAFINVVK
                     TENLTLMAAKLFTGRTHQIRAHLASLNRYILGDSLYGYKGKYDCRIMLHAYFLYFIHP
                     KTKEQIFVKAPLMEDFKNIMFEQINLGENDEKISLEFLLEFFNSFA"
     gene            22199..23299
                     /locus_tag="RJ266_000128"
     CDS             22199..23299
                     /locus_tag="RJ266_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HDV7353916.1"
                     /translation="MFRLDRRILTHFDYMQPILFLPIILISFFLIFEANPFLAEKQFV
                     YACVGLFAFMVFFFFPIRKFIWIIPVAYWINIFLLLSVDIFGVEKLGAKRWLEIPFTH
                     FTIQPSEIFKPSFILMLAYLIYQNPPPKNGYKLKQFIKLSFYIILPFLLIAKEPDLGS
                     AMVLLLVGFGVLFIMGVHYKIWLSIVIAISVSSPIIYTHLLKPYQKQRIHDFISEKPS
                     YQVAQSMIAIGNGGLTGKSQDEATQTHFKFLPISTSDFIYAYMIERFGFIGGLTLIIF
                     YILLIFHLLSLNYKLKDDYFARVAINCVALFIFIYAAVNISMTIGFAPVVGIPLPFFS
                     YGGSSFTIFMIFFGILQHLITFRYFWTDIKAK"
     gene            23353..23429
                     /locus_tag="RJ266_000129"
     tRNA            23353..23429
                     /locus_tag="RJ266_000129"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:23387..23389,aa:Ile,seq:cat)
     gene            complement(23538..23613)
                     /locus_tag="RJ266_000130"
     tRNA            complement(23538..23613)
                     /locus_tag="RJ266_000130"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(23578..23580),aa:Phe,seq:gaa)
     gene            23753..25096
                     /locus_tag="RJ266_000131"
     CDS             23753..25096
                     /locus_tag="RJ266_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HDV7353917.1"
                     /translation="MKQFGLDRRTFKILLAGYIIIALFGALLLHSSWAHTTPINFLDA
                     FFTSTSAVSMTGLVVKNTAVDFTLAGQIIILALVQIGGLGYMGIGLFVYILIRKKVGF
                     SARNLLKESLFYPSMDGLFKFFKKVLLFIFTIELIGAILLTMRFALEMNFKKALWFGI
                     FHSISAFNNSGFTIFEHGFIAYKHDIAINLIITSLIIIGGLGYFVLVELYFFQRKKLQ
                     NLSLHTKMVVVASIFLIFSSTLIIFAFEYSNPQTIGHFSFFDKILSSYFIAINYRTAG
                     FNTLDMGHLHDASLFFGSLFMVIGGAPGGTAGGMKVTTVMVLLLYAYWSIRDGRVRIF
                     GHEIPRETISKAFIIAVGSAVYIVIAVILLSLLESKFDFIALLFETSSAFATVGISVG
                     NGGTLSLCALFSDPSKVIIIIMMLSGRIGVFAFLLSVFKQDKAIHLKFPEGKVNL"
     gene            25107..25757
                     /locus_tag="RJ266_000132"
     CDS             25107..25757
                     /locus_tag="RJ266_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HDV7353918.1"
                     /translation="MKNLNYGIIGLGKFGSVVADELIAGGHTVIVADKDEEALKSIQN
                     PPSYAYILDSTNISALKEAGFHDVEVVIVSIGENVEKSILTLMALKDIGVKNIIAKAT
                     SNIHGQILSKLGATKVIYPEKESAKRLVKEFLTKDADYEVFDLSANTIRAIKINIDEK
                     LAGNSLKHVAQNMKVISYKKLNSDWEILPDLETTTVYSGDVVILLGTVKELREFEH"
     gene            complement(25754..26425)
                     /locus_tag="RJ266_000133"
     CDS             complement(25754..26425)
                     /locus_tag="RJ266_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthetic enzyme MqnA/MqnD family
                     protein"
                     /protein_id="HDV7353919.1"
                     /translation="MIFGKIDYINLLPLHIYLKKYPLPNGYKASMEYKKGVPSKLNKD
                     LFYRRIDAAIISSIESARKKYKNLDLGICANKRVLSVLVEKNTSNAKDPSSATSNALA
                     KVLKQDGKVIIGDKALKLYLKDPSKYIDLCAKWHEKTGLPFVFARFSCVQKKALYKQI
                     LKKFPKTKIKIPYYILQNYAKTRDLDIKDVRYYLDEVIYHKISTKEKTALKRFVKACK
                     ALNLA"
     gene            complement(26431..27057)
                     /gene="upp"
                     /locus_tag="RJ266_000134"
     CDS             complement(26431..27057)
                     /gene="upp"
                     /locus_tag="RJ266_000134"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HDV7353920.1"
                     /translation="MKNIHCINHPLIEHKLGILRAKETKPFQFRMLIDEISSFLLFEV
                     SKDFSLKEIEISTPIQKTIVKKLDEKIMICPILRAALGMLESVFKMIPDASVGFLGFV
                     RNEETLKADFYFQKLPKDAKKRTAIVIDPMFATGGTAIDACNFLKSQGVKKIKFISIL
                     AAPQGLKKFSQMHDDVEVFVACIDEGLNEKGYIIPGLGDAGDRVFNTL"
     gene            complement(27054..28289)
                     /locus_tag="RJ266_000135"
     CDS             complement(27054..28289)
                     /locus_tag="RJ266_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDV7353921.1"
                     /translation="MNLKEEALKYHLGGKIDIVPSKPMATSHDLSLAYSPGVAEPCLE
                     IAKDNELAYTYTNKANLVAIVSDGSAVLGLGNIGAQASKPVMEGKACLFKKFANVNAY
                     DIEIDVHSVEEIVNFCKALAPTVGGINLEDIAAPKCFEIEAALQDLGIPVMHDDQHGT
                     AIISTAGLMNAMEISGKKFKDIKVVVSGAGAAGIASAKMYRNLGVENIILVDSKGVIS
                     KDRNDLTPQKLEFAVDSKEKTLKEVLKGADVFLGLSAPKILDDEMVLSMAKDSVIFAL
                     ANPIPEVMPEDVARLRKDTIVGTGRSDYPNQINNVLGFPFIFRGALDVRASKITENMK
                     VAAAKALADLAKLPVSDAVKKAYNLSTLEFGRDYVIPKPFDERVKAAVSTAVAAAAVK
                     DGVAKVKNFNEKAYFESLK"
     gene            complement(28291..29682)
                     /locus_tag="RJ266_000136"
     CDS             complement(28291..29682)
                     /locus_tag="RJ266_000136"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDV7353922.1"
                     /translation="MHEKLTTRFAPSPTGYLHIGGLRTALYNYLYARKNGGNFLLRIE
                     DTDLKRNSKEATKAIIEAFKWCGLEHDGEVTYQSERFDLYKEYVKKLLDEGKAYYCYM
                     SKEELEELRAKQEAAKERPRYDGRYREFTGTPPQGIEPVVRIKAPQSGEIVFEDGVKG
                     EVRFKAEDIMDDFIIARSDGTPTYNFTVVIDDALMGVSDVIRGDDHLSNTPKQIVLYE
                     ALGFKIPKFFHVAMIHGEDGKKLSKRHGATDVMEYKEMGILPQALLNFLVRLGWSHGD
                     DEVFSLEDLKKLFDPYHINKSASCYNAKKLEWLNAHYIKTLPFEEINRQLKDLGFDLS
                     VYEKAGFLLDLLRERAKTLHDIINGAKSIVNAPQNYDENAVQKFINKNNLELLQAFAN
                     TLKDQKTGKDFEDFTNDFLEKKEAKLKDLAQPIRIALTGSAVSPSIFEVLEFLEVDEC
                     KKRIENFLKVRGK"
     gene            29747..30562
                     /gene="salC"
                     /locus_tag="RJ266_000137"
     CDS             29747..30562
                     /gene="salC"
                     /locus_tag="RJ266_000137"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase SalC"
                     /protein_id="HDV7353923.1"
                     /translation="MKKILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKAL
                     KIDRNKALGVLINEKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSK
                     NQSYEQFRANFKKDLEKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANI
                     YLSNNPQTLENIKNTKKTILKPQNASLNTSNADPRLLGLLSQIPVGGFSPVLNGKNGY
                     ELYEVKSKDGAQTPEYEQIKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEYLR"
     gene            complement(30599..31930)
                     /locus_tag="RJ266_000138"
     CDS             complement(30599..31930)
                     /locus_tag="RJ266_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HDV7353924.1"
                     /translation="MEIKSILIANRGEIALRALRTIKEMGKKAICVYSEADKDALYLK
                     YADASICIGKARSSESYLNIPAIITAAEIAEADAIFPGYGFLSENQNFVEICAKHNIK
                     FIGPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSDGALAGAEAAKKLAKEIGYPVILKA
                     AAGGGGRGMRVVENEKDLEKAYWSAESEAMTAFGDGTMYMEKYIQNPRHIEVQVIGDS
                     FGNVIHVGERDCSMQRRHQKLIEESPAILLDEKTRTRLHETAIKAAKAIGYEGAGTFE
                     FLVDKNLDFYFIEMNTRLQVEHCVSEMVSEIDIIEQMIKVAEGYALPSQESIKLNGHS
                     IECRITAEDSKTFLPSPGKITKYIPPAGRNVRMESHCYQDYSVPPYYDSMIGKLVVWA
                     EDRNKAIAKMKVALDELLISGIKTTKDFHLSMMENPDFINNNYDTNYLARH"
     gene            complement(31932..32387)
                     /gene="accB"
                     /locus_tag="RJ266_000139"
     CDS             complement(31932..32387)
                     /gene="accB"
                     /locus_tag="RJ266_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HDV7353925.1"
                     /translation="MTKEEIKELVNLFAEANISKIKIKEQDGFEIELERDMCCDVPAP
                     VCPPVPAPQPINVSVVNEAQPSQSVKSNKPSINSPMVGTFYQAPSPGAAPFVKVGSTV
                     KKGDTIAIIEAMKIMNEIEAEFDCRIAEILVADGQPVEFGMPLFAVEKL"
     gene            32533..33093
                     /locus_tag="RJ266_000140"
     CDS             32533..33093
                     /locus_tag="RJ266_000140"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HDV7353926.1"
                     /translation="MGLKADNWIRKMALEHKMIEPFCEANIGKGVVSYGLSSYGYDIR
                     VGREFKIFTNVNSTVVDPKNFVEENVVDFEGDVCIVPANSFALARTIEYFKMPDDVLA
                     ICLGKSTYARCGIIVNVTPFEPGFEGHITIEISNTTPLPAKIYANEGIAQVLFLQGDE
                     KCDTTYKDKKGKYQAQTGITLPRILK"
     gene            33143..34147
                     /gene="pseB"
                     /locus_tag="RJ266_000141"
     CDS             33143..34147
                     /gene="pseB"
                     /locus_tag="RJ266_000141"
                     /EC_number="4.2.1.115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (inverting)"
                     /protein_id="HDV7353927.1"
                     /translation="MFNKKNILITGGTGSFGKTYTKVLLENYKPNKIIIYSRDELKQF
                     EMASVFNAPCMRYFIGDVRDKERLSTAMRDVDFVIHAAAMKHVPIAEYNPMECIKTNI
                     HGAQNVIDACFENGVKKCIALSTDKACNPVNLYGATKLASDKLFVAANNIAGNKQTRF
                     GVTRYGNVVGSRGSVVPFFKKLISEGAKELPITDTRMTRFWISLEDGVKFVLSNFERM
                     HGGEIFIPKIPSMKITDLAHALAPNLSHKIIGIRAGEKLHEIMISSDDSHLTYEFENY
                     YAISPSIKFVDKDNDFSINALGEKGQKVKDGFSYSSDNNPLWASEKELLEIINHTEGF
                     "
     gene            34149..35279
                     /gene="pseC"
                     /locus_tag="RJ266_000142"
     CDS             34149..35279
                     /gene="pseC"
                     /locus_tag="RJ266_000142"
                     /EC_number="2.6.1.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine transaminase"
                     /protein_id="HDV7353928.1"
                     /translation="MLTYSHQNIDQSDIDTLTKALKDEILTGGKKVDEFEEALCEYVG
                     VKHACVLNSATSALHLAYTALGVQEKIVLTTPLTFAATANAALIAGAKVEFIDIKNDG
                     NIDEKKLEARLLKDSKNIGAISVVDFGGNSVEIDEISSLAKKYNIPLIDDASHALGAL
                     YKSEKVGKKADLSIFSFHPVKPITTFEGGAVVSDNEELITKIKLLRSHGIIKKRLWDS
                     DMIELGYNYRLSDVACALGINQLKKLDHNLEKREEIASFYDKEFEKNPYFSTIKIKNY
                     KKSSRHLYPILLFPEFYCQKEELFESLLHAGVGVQVHYKPTYEFSFYKKLLGEIKLRN
                     ADNFYKAELSIPCHQEMNLKDAKFVKDTLFSILEKVKKGYCG"
     gene            35272..36579
                     /locus_tag="RJ266_000143"
     CDS             35272..36579
                     /locus_tag="RJ266_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4910 domain-containing protein"
                     /protein_id="HDV7353929.1"
                     /translation="MDKLDFRSQDFSQTGKAMYELACELFPIPRSITGQGFRASLELL
                     NKTLGGGILKFHSIKSGTKVFDWIVPDEWNAKEAYIITPEGEKICDFKKHNLHLLNYS
                     EAINQEIELEELQDHLYSIEEMPDAIPYVTSYYKRRWGFCLTHNERKKLKKGKYKVYI
                     NAKHDENGVLDYADFILPSTQNSKDEILISTYLCHPSMANNELSGPVVAIFLAKWLLS
                     LKKRRYNYRFVIIPETIGSIVYLSKHLEHLKKHVKAGFVLSCLGDDHAYSLIHTPKEN
                     TLSDKVALHTLKNKENFKAFSFLDRGSDERQYNAPLVNLGIVGVCRTRYLEYEQYHTS
                     KDDLNFISEKGLMGGLQSMQEMILNLEINAVYKNTIVCEPNLGKRGLYHTLSTANDIP
                     LACNFLAYCDGENDIIDIANILNMQAYEFKELLKKIKFYGLVK"
     gene            36576..37367
                     /gene="legH"
                     /locus_tag="RJ266_000144"
     CDS             36576..37367
                     /gene="legH"
                     /locus_tag="RJ266_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase LegH"
                     /protein_id="HDV7353930.1"
                     /translation="MKYFLEHNDKKYSDKDLIDAFYQLDIKRGDILCVHTELFKFGIP
                     LLSRNEFLQTILNCFFEVIGKEGTLIMPTFTYSFCKNETYDKINSKTKMGALNEYFRK
                     QTGVKRTNDPIFSFAIKGAKEELFLKDTTSCFGENCVYEVLTKENGKYMTFGGQGHTL
                     THYAEEQFNVFYRYHKIFSGILIDENNISYNKTISYYVRKLDISSEPNLINIINIVNN
                     TKNFKKNNFAGDHINIYNAKEYIEILWKKLDINQTILIENYDTIY"
     gene            37398..37628
                     /locus_tag="RJ266_000145"
     CDS             37398..37628
                     /locus_tag="RJ266_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDV7353931.1"
                     /translation="MEKQFYEILENILETKVDENTNLSMENCKNWTSLAHIDIIMSLE
                     EEFEIKFNKEDLSLLKSQSALLEKIQTLKAEK"
     gene            37625..38518
                     /locus_tag="RJ266_000146"
     CDS             37625..38518
                     /locus_tag="RJ266_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDV7353932.1"
                     /translation="MKENIEKLFQAIAQKNPIHSKYLKKIEFSQEDEEEFDKLISYYI
                     QDGISIKEQCDCYLLILNDTLEETKFFIENGAYRYSSFDEVKDKVYFNESYMKQYMIG
                     LALSSFVWIAHIKVRKYFSQYLKNFTPKTTYFEIGPGHGEYFARAVKSGKFSAFYGLD
                     ISPTSCELTQKIVKQQVGGLITKCDFLCQDFFTYDFDKKADLIVIGEVLEHVEKPLEF
                     LKRSKELLSDGGEIFATIPINAPAIDHIYLFSHPDEVKDLIEKSGLKFKAYECFMAND
                     YSLEKALKFKNAITMAVVLNA"
     gene            38511..38927
                     /locus_tag="RJ266_000147"
     CDS             38511..38927
                     /locus_tag="RJ266_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDV7353933.1"
                     /translation="MLNKTLNLPLHHIGVACKNLEKERECFFKLGFYKESEFIDEKQG
                     VRGEFIIPCNEAFPQYRFELLQNLNDKGPLDSYLKNNTKMYHLAYESKNIAQDLILLE
                     QQGGICIVPIMQASYFAKLCFIMMPNRLLIELVELK"
     gene            38924..40486
                     /locus_tag="RJ266_000148"
     CDS             38924..40486
                     /locus_tag="RJ266_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDV7353934.1"
                     /translation="MNLFSPHLKRNELIKFAKELDFSKSQDLLINVHRNHAFEGVQSI
                     IAPFLHFANLRAEFNFSSYDDSLSFDNFKEASLELLWLDLTRYKNNVQNFIEERLLEL
                     RKISQNPILVLSLGEFKTDKKILNCEIFNIEKLIKEYFDEEDILDLAKEELTGSKLNN
                     KALIFLAQILGLSLIPALVKPALKALVLDLDNTLYQGILGEEGIDNLNLSPLHKTLQE
                     KIKTFKKQGFLLALASKNEEKDAKKLFEIRKDFILQWDDFDARMINWEPKGENILKIA
                     KKFNINTNAMLFIDDNIAELENTKFTGVKTLLCDENILYKIKLFPNLLKLSNTKEDQI
                     RAKDIAANALREELKSLSDEEYFQNLEISLNFSKNDLQNIPRISELLGKTNQFIANYT
                     RLNQEKVAQHMQKELIVSVSMSDKLSDSGIIAIFVFSCKEGNLFIDDLCISCRALGRK
                     LETRMFFKAFELALHFFDLKNNNARLYYQKGERNMPFLSFLEQTSKEIEKNSALVSFQ
                     NLNFKGLIIHEN"
     gene            40476..41537
                     /locus_tag="RJ266_000149"
     CDS             40476..41537
                     /locus_tag="RJ266_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HDV7353935.1"
                     /translation="MKTRFDKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKK
                     VIGLKTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACY
                     LHQLLNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGKILLVCGDTLSKFIHPKNM
                     NLAPIFGDGVSATLIEKTDFNEAFFELGSDGRHFDKLIIPKGAMRIPKADIFNNDSLM
                     QTEEFRQLENLYMDGTNIFNMALECEPKSFKEILEFSKVEEKDIAFHLFHQSNAYLVD
                     CIKEELKLNDDKVPNFIMEKYANLSACSLPALLCELDTPKEFKASLSAFGAGLSWGSA
                     VLNFKDLYTKDILIYTKEK"
     gene            41537..41758
                     /locus_tag="RJ266_000150"
     CDS             41537..41758
                     /locus_tag="RJ266_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDV7353936.1"
                     /translation="MTKTEFLEELKEAMHRDENLSEDMLLDDIDEWDSLAFVSVMVLY
                     KNLFALKITAEDLKNCQKVSDLINLAKLD"
     gene            complement(41772..42986)
                     /locus_tag="RJ266_000151"
     CDS             complement(41772..42986)
                     /locus_tag="RJ266_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HDV7353937.1"
                     /translation="MLINQTFEIDSCDDVELGIKRTSKLEYRISYDDEKDLKAIVFVI
                     GGYGANANIYFLDSYRNYIAKNFDVVTINVFYHCFCQRRSDVLKYDASAKFLEEDLEN
                     FSKVLNDFNIDSRNLNSNNALEYYHHLDHYITTLKSQRKLAQNYQAKFTSTFIPPNGE
                     YQNFGIMAAIDHINALKDLVKRFPKLADLPKIYGGGSYGGYLALLIAKIAPWYVDGVI
                     DNSGSALPPLNYILGREMESGCDYVLNSSHILIQCFLKTHWTRKENSPYFFNNENYFI
                     RTLLNKDHLILQSQKNKNIIYVSYHSDKDPLTPANFKQQTMQILKILGYDVSLNLIDE
                     NKIDGKFIKNLDHGCGIPDKALFRKELPLMLEKLQKRKSLMQENSISYPCGNKVFMFK
                     DVGDKFELEIKD"
     gene            complement(42999..44212)
                     /locus_tag="RJ266_000152"
                     /pseudo
     CDS             complement(42999..44212)
                     /locus_tag="RJ266_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016818182.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
     gene            44291..44989
                     /gene="pseF"
                     /locus_tag="RJ266_000153"
     CDS             44291..44989
                     /gene="pseF"
                     /locus_tag="RJ266_000153"
                     /EC_number="2.7.7.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid cytidylyltransferase"
                     /protein_id="HDV7353938.1"
                     /translation="MKNLCIIPARGGSKRIPRKNIIDFLGKPLISYSIENALNSGIFD
                     EVVLSSDDEEIIEVALKYGAKAPFVRDKNLSDDYASSTAAVQNAIEILQSQNQIYDHV
                     CCLYATAPLLNKNILKQAYEKFIQNESKFLFAATEFEYPIQRAFYLNENNQVYMFDEK
                     HYKSRSQDLTKAYHDAGAFYFGTSKAWLEEDFMFKPHSSVFVLPRNLVYDIDTMQDLE
                     FAKILYKANHESAF"
     gene            44973..45797
                     /gene="pseG"
                     /locus_tag="RJ266_000154"
     CDS             44973..45797
                     /gene="pseG"
                     /locus_tag="RJ266_000154"
                     /EC_number="3.6.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,4-diacetamido-2,4,
                     6-trideoxy-beta-L-altropyranose hydrolase"
                     /protein_id="HDV7353939.1"
                     /translation="MKVLFRSDSSSQIGFGHIKRDLVLAKQYSDVSFACLPLEGSLID
                     EIPYPVYELDSESIYELINLIKEEKFELLIIDHYGISVDDEKLIKLETGVKILSFDDE
                     IKPHHCDILLNVNAYAKASDYEGLVPFKCEVRCGFSYALIREEFYQEAKENREKKYDF
                     FICMGGTDIKNLSLQIASELPKTKIISIVTSSSNPNLKKLQKFAKLHNNIRLFIDHEN
                     IAKLMNESNKLIISASSLVNEALLLKANFKAICYVKNQESTATWLAKKGYEVEYKY"
     gene            45794..46267
                     /gene="pseH"
                     /locus_tag="RJ266_000155"
     CDS             45794..46267
                     /gene="pseH"
                     /locus_tag="RJ266_000155"
                     /EC_number="2.3.1.202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase"
                     /protein_id="HDV7353940.1"
                     /translation="MIKLKNFTELNSQEIELIFKWRNHPDINQFMKTKYIDFEEHLRF
                     LKKLHQDSSKKYFLVFQDEQIIGVIDFVNITTKSCEFGLYAKPNLKGVGQILMNEIIR
                     YAFENLKVNTLKAYVFKDNRKALKLYQQNHFTIYDEDKDFYHICLKQSDCKALPS"
     gene            complement(46232..46978)
                     /gene="hisF"
                     /locus_tag="RJ266_000156"
     CDS             complement(46232..46978)
                     /gene="hisF"
                     /locus_tag="RJ266_000156"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDV7353941.1"
                     /translation="MLKTRIIPCVLLKNGQLVKSIEFKDFRTIGHLTSTMRIYNARNV
                     DELIILDIDASKSGEIDFESIEDLAKECFMPLTIGGGIKTLKDIQKILNLGADKISIN
                     SKALEDMDFISKAANRFGSQCIVCSIDVKRKGGQFCVYDRGNLLEKSPLELALEYEKK
                     GAGELLLTSVDFEGKAKGYDLELLKIFQNKLKIPLIINGGLSNPSDGVKALNLGADAL
                     AGAYIFHFSKYTPKDVKEELARQGFAVRLL"
     gene            complement(46979..47584)
                     /gene="hisH"
                     /locus_tag="RJ266_000157"
     CDS             complement(46979..47584)
                     /gene="hisH"
                     /locus_tag="RJ266_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDV7353942.1"
                     /translation="MIALIDYKAGNLNSVAKAFEKIGAINFIAKNPKDLQKADKLLLP
                     GVGSFKEAMKNLKEFGFIEALKEQVLVQKKPILGICLGMQLFLERGYEGGVCEGLGFI
                     EGEVVKFEEDLNLKIPHMGWNELEILKQVPLYQGIDNKSDFYFVHSFYVKCKDEFVSA
                     KAQYGHKFVASLQKDHIFATQFHPEKSQNLGLKLLENFIRL"
     gene            complement(47581..48717)
                     /gene="pseA"
                     /locus_tag="RJ266_000158"
     CDS             complement(47581..48717)
                     /gene="pseA"
                     /locus_tag="RJ266_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid biosynthesis protein PseA"
                     /protein_id="HDV7353943.1"
                     /translation="MKFCKKCVMPDTKPDLHFDEEGVCDACRSQEAKNQNINWQEREK
                     EFFELIKKYKKHPVYDCVIGVSGGKDSTFQVVKMLELGLNPLCVCFEPSVPTKIGRKN
                     LDNLNHLGVDLIHIKRDPKVYQKLAREAFIRTGDNEWQNHLGIFTSVPRIAVNFGVPL
                     IIWGESPQIEYGGPASSKNKNILGREWLEEFGGLLGNRASDMLGVNGITEKDLFLYTY
                     PSDEELQRVGVTGLFLGYYFKWDYKKILEISKKYGFLTLDHPVETTYENFENLDCYSN
                     HVHDYLKYCKYGFGRATDNACLDIRLGYISREEGVRLVQKYDGKPPKKAIKKYLEFSG
                     FSEEEFQKIVDSFTNKKIFKRDENGKFIRDYDGSLVRKDECVLK"
BASE COUNT        16594 a         8513 c         6696 g        16944 t
ORIGIN      
        1 aataaaatca ataatttatc aaattttaaa taaaattatg taaagatttt aaagactaca
       61 taaaaattta caaggacact agaatgatta atgtgttgat gatagaagat gatcctgact
      121 ttgcacaatt attatctgaa tatttagcgc aatttaatat taaaatcaca aattttgaaa
      181 atcctaaaag tgctttaaat gtgggtattc aaggctatga ttgtctgatt ttagatttaa
      241 ctttacctgg aattgatggt cttgaagttt gtagagaaat ccgacaaaaa agcaatattc
      301 ctattatcat ctcatcggct agaggtgact taagcgataa agttgtgggg cttcaaatcg
      361 gtgctgatga ttatctacca aagccttacg atccaaaaga aatgtatgca aggattatga
      421 gtcttattcg tcgcacaaaa agagttgaac acactaataa tgaaaatatt aactctgctt
      481 tcaaaattga tgaaagaaga catgagatca cctatgaaga taaggtttta acacttactc
      541 ctgctgaatt tgaaatttta gaatacctta tccaacaaca cggatatagt gtttcaagag
      601 aacagcttgt aagtcgctgt aaaaatctaa aagataaaga ttctaaaagc cttgatgtta
      661 tcatcggtcg cttaagggta aaaataggag atagttcaaa atctccaaaa catatttttt
      721 ctgttagagg tataggatat aaactgatag gatgacaaaa aattattcta ttcataccaa
      781 actgattatt ttatttgttg ttactttttt cttggtttgt gtgcttttta tcgttctttt
      841 aaaaatagaa gggaatacct ataatgaaga agaaagttta aaacaagaaa atcttataaa
      901 aaatttactc atctcctatg aaaacacttc aggtgttgaa ataggagctt atcttggaaa
      961 cagcggtttt aacgctgtac aaaatcccaa tcttgtaaaa gctataagaa ataatggaca
     1021 atcacttttt aaagcaggcg gagagctttg tactctttct tctttaaaat atcatagcaa
     1081 tctttatttt gatgttcaat gtaaagattt tgatggcttg tatgaagaaa atactagtga
     1141 tagggtttat aatcttttat tgataggatt tttctctttt tctttgttgg ttgtttttat
     1201 gtatttttct gtattaaaat ccttagaacc tttaaaaaaa ttaagaagac aagttgccga
     1261 agttgcaaat ggggaacaac ctaattttct agactatcaa gaagatgaag taggtaaaat
     1321 cgcctttgaa tttcaaaaag ctttcaaaaa aaatcaagaa ttaatccaat caagacaact
     1381 gttcctaaga acaattatgc atgagttaaa aacccctata ggaaaaggga gaatcatttc
     1441 tgaaatgatc aaagaagaca gacaaaaaga aagacttatc gctatatttt tacgcatgga
     1501 ttctttgatc aatgaatttg ccaaaatcga aaatttattt tcaaaaaact acaacttaca
     1561 ctttaaacct agtcgtttta gcactatact tgaggaagct aaagaacacc ttatgagaga
     1621 tgattttaat aaagttgtaa aagtcgatat aagatatgat gctttaatca atgttgatat
     1681 ggaaattttc tctgtaattt taaaaaatct tatcgataat gccttaaaat actcaaacaa
     1741 tggcacttgt gagctttttt gttgcaaaga atgttttacc attaaaaatc caggcaagcc
     1801 tttagcagag cctatagaac attatcttga agctttcaca agagaaaaac acaatcaggt
     1861 caaaggtatg gggctaggac tttatatagt ttcagaagta tgtaaactgc ataattttga
     1921 tttgatttat ttttatgatg atggaaaaca ttgctttaaa attttctttg gagataaaga
     1981 aaaataatgg caaaaggcct agaaaaattc aacgaacttg ttgaaagttt cgcgaattta
     2041 cctaccatag gaaaaaaaac cgccataagg cttgcttatc acctttgcat aaataatcaa
     2101 atcgatggta tgaaacttgc acacaatata gaaaatgcta tccgctttat aaaaccttgt
     2161 gagcaatgcg gtgctttaag cgaaaatgag ctttgtgaaa tttgtagtga tgaagaaaga
     2221 aataaaaaca tcttatgtat agttgaaagt ccaaaagata tactaacact cgaagagagt
     2281 caaagctaca atgggttata ttttgtttta gatgacttaa gtgaagaaaa acttgaaaaa
     2341 ctaaagcaaa tcatacttaa actaaatacc tctgaactca tttttgcgtt gacacatagc
     2401 attaattctg atgcaactat cttttttata gaagataaat ttaaaggctt aaacctaact
     2461 tttagtaaaa tcgctcaagg aattccaagt ggtgtaaatt tagaaaatgt ggatttaatc
     2521 tctttaaata aagctatgaa ttttagaaca aaaatttagt aatttttata agaaatatcg
     2581 gctaattctc gcaaagaaaa atccgcaatc ttttcataag taaaaccttc cttgcttaaa
     2641 aagtcaagta aagttttttc cataatttta gctccttgta taagctcatc tgagagctta
     2701 aaactcatcg cttcaatacg ctttggcaca caagctaaga tatgtgtttt aggcaaatct
     2761 cctgcaagtt ccatgtattg taaggtttga agcatttcta tttcatgggc acttccactc
     2821 cagctaattt tattaggcat agcatcataa ggaaagaaaa atacatctcc tatactcgca
     2881 ccttgcgctt ctatacagtc taaaacgata agtctatcgt atcgagcgat gatatagcta
     2941 agctgcaaag ccaaagttcc accatcaaca aaatctaaag taaattcaga atgagtgaat
     3001 ttgtagtttt tttcaagttg tttgcaaaga tgaacgccta agccttcatc cgcaaacatg
     3061 atattaccta ttccaaggac taagaatttc aatgctgttc ttcttttaca aatttatatc
     3121 cgctaataat agcatccata gcaccatctt taccttttac tgcgttaaaa atcgccatgt
     3181 aaatatgtac tggcacaaaa atcataatta cccacatcaa aattctatga taagttctta
     3241 catcggccaa accgcccatt gcagcttcaa gcggtcttaa aatatgatat aaaagcccac
     3301 ctaagccctc atggtaagta tgagtataaa gaataagccc tgtaagaatg atacctaata
     3361 tcacaagata aaagaaaaaa taagttacaa attgcaaagg attataaacc ccttttaaat
     3421 gcggatgttt tcctaagaaa atgtaaaatt ttacttgttc tatccataat ttgatattaa
     3481 aaatatccca tacacttctg cgttcttttg cgcttacctt atcgcagaaa aacaaatata
     3541 ctttaaaaat aatacaagcg attaaaacaa aacccaccgc ttgatgtact aagcggtatt
     3601 ttgcttgcat aaaatttacg ggttcaccgt tactaatagg gctttggaac acataggaaa
     3661 gataataccc tgtgccaata agaatcacta tagcaatagc tcttacccag tgcgttaaac
     3721 gcaaacctat gctaaattca tattcagctt ttctttgcaa tttttcttct ttgttttgca
     3781 tgaaagcctc cttataaatt gacattcact ttatattcac ttagattatt gcccttagta
     3841 tccattacat gcaccgcaca agcaatacaa ggatcataag agtgaatttt tctaatgatt
     3901 tcaagtggtt gttttacatc agcgatttta agtcctatca aacattgctc ataacttcca
     3961 cctacgccat ttgcgtcttt tggacttgca ttccaagtag aaggcaccac agcttgccaa
     4021 ttttcaataa caccattttt aattctacac caatggctta atgttccgcg tggcacatgc
     4081 cccatatagc gtcctttgta ttctttagaa ttatcgatca cataaggagc acaagtactc
     4141 tggtctactt ttaaattttc aactaaatta ttaaacgctt ttaaagcatt atttgcaacg
     4201 atttttgctt caatacaacg agcagctgtt cttccaagtg tgctaaatac agcatttaaa
     4261 ggaagtcctg tttcttttaa gaactcatct accacaggaa caacattttg attaccttta
     4321 gcataattta caacgatatt tgctaaaggt cctacttgca taggatttcc ttcatagcgt
     4381 ggagctttaa tccagctata tttaccctta gtatcaaaca ctttagaatg gacattattt
     4441 ccatgatgat ctacgctttc tccatctaca agtcctgtat aatttggatt tgttttgcca
     4501 tcataaggat gtaaaggttc attgtctgca taccaagaat gagttgcctc ttcagtaatc
     4561 ttatcttctt ctacttcata aaccttgctt aaatctccat ttttgataat accactttca
     4621 aaaagccatt catctcttcc gatttgaaat tctttaaagg tataaagatt atttacccct
     4681 atatcattta aaacacttgc ttcatgtgca taagcttttc ctgccatcac aagatcagga
     4741 taatacgcac gattaacaaa gtcttgcact tcttggaatt taaccatata ttcacccatt
     4801 cttgcaggat cgagtaaatc cataacgcaa gttacaccac caacggttaa gctttgtgga
     4861 tgtggatttt tagctccaaa aatcgccata cattgagcaa tgattctttg aattcttaaa
     4921 cattctagat agtgagaaag aacgattaaa ttttgctcag gacttaaacg ataagttgga
     4981 tgaccataat acgcattagc aaaaggtcct aaatttcctt tatctacaaa agttttaagt
     5041 ctttgttgca cttcaagaag tttatccgca cctgttgcat aaggatttga agtgtattta
     5101 aaagcttcat cgcttgcttt tttaacatca gcacttaaag cacttaccac atcagcccaa
     5161 tcaagcccat gaagttgata aaaatgcaca atatgatcgt gtaaaaataa agccgcattc
     5221 attaaagttc ttgttaaaag cgcatttaaa ggcggagtaa tacctaaagc attttcaaca
     5281 gcaactatac ctgctttata atgtgaaaaa gtacaaactc cgcaaattct ttgcgtcata
     5341 aaacccgcat ctcttggatc acgccctttt actatggttt caataccacg ccacaaagta
     5401 gagcccgcat aagcttcttt taccacattg ttatcatcaa caacaacttc aactcttaaa
     5461 tgcccttcaa ttcttgtaat aggatctacg attatttttt gactcatttt tattccttat
     5521 ctttttgcat ggaagatata actgcgtgtg ctgctatagc aacgcctgtg agtgtaagca
     5581 cacctatacc gattttatct gaaacactat ccgcacccaa accaaaaacg gtatcaaatt
     5641 tacgactagc cataggctct tcaaaaggtc ccatagtatc ccaaaaatta ggctcagaac
     5701 aacctataca accatgccct gcttgaatag gccaagaagt gtgctggtta aatctctctc
     5761 ttgagcagtt attaaaagta taaggtcctt tacaacctac tttataaaga caaaaacctt
     5821 gttttgctcc ttcatcccca aaagcatgta caaattcacc cgcatcaaaa tgtccgcgtc
     5881 tttcacaaag atcatgaatt cttaaaccat aagcccattt tggtctatta tacacatcaa
     5941 gtgctggtaa ctcaccaaat aataaataat gaagtacatt acccactata tttttttcac
     6001 ttggaggaca gcctggaaca ttgatcacag ttttgcttgt tactttgctt aaaggctgcg
     6061 cgttgctagg atttggtctt gcggcttgaa ttcctccaaa gctagaacag gttcctatag
     6121 caaaaatcgc caaagcattt tcacttgcca tttttgaaag ctcatagcct gtttttccat
     6181 gtgcgcctat ggttaaaaaa tgctctgtat cacccatagg gataccacct tcaaccatta
     6241 aaatgtattt atttttatgc ttttgaatgg cactttctaa attttcttca gcttgccaac
     6301 ctgctgcagc catcactgtt tcgtgatatt ctaaagaaat ataatcaaaa atcaaactat
     6361 caatcgttgg agtatcactt cttaacaaac tctcgctaca gcctgtacac tcagccatat
     6421 gaagccacac aacaggaagc ctatcagcaa gctcagcagc ttttgccacc ataggagtaa
     6481 aactcgctgg caaagccaaa aatgcagtca tagcacctgc ccatttcata aaatcccttc
     6541 tagaaaaacc tgacttttct aatgcttttg taatactatc attgtctttc aaagaaggaa
     6601 gcttttcaag agccgataaa cgcgactcta tttgatgata atcaatcatt atatttcctt
     6661 tataacatga aatttattct ctataaataa taaaataaag aaagttaaaa taaagttaaa
     6721 aacttactct cataagcaaa tattagcatc actcttaatt aaagcttaat cataagcctt
     6781 ttttaagttt gcgaatcaaa aatcttgcag gatgaatagc gtggatgtat tttttttcta
     6841 aacacaaggg ttcattattt atcaatgcac acaaatacct tgccgctaaa acacttgtac
     6901 taaaacccct tgacccatga gcaaaattaa aatacaaatt acaagacatt ttagctggtt
     6961 tttgctcctt attttttgtc cataataaag ctttatattc ttctttataa aacgcttcat
     7021 cataagcatt tccaactatc ataaagcgat cactcgaata agatctaaaa cctactttag
     7081 aacctatgat ttctaatttt gtatttttat ccataaaatc ggctatattt tctatatttt
     7141 gtttatcatc ttcttctttt gattctaaac ttgcattaag cctatcataa cttgcaccaa
     7201 ttacttgcaa atcatctttt acagggcaaa tataagcctt agaagataaa ggaaatgggg
     7261 tatctaaaaa aggttttaga tgtgtaactt gacctcttac tttgcttaat ttcatctcat
     7321 cataaaaaac aaagtctttt gcatctgcac ccatagcata aatcaaaacc gcataatcac
     7381 ttttaacaac atcattttta aattttaaac taaaacaccc attttcaaat ttataagctt
     7441 gaaattcatg attaaaatat atacaagctt tgcttttttc aaaaagattt ttaaccaatt
     7501 tttttggaaa aatcactcca ccctcttcta aaaaagcttg attttttgaa attttaaaca
     7561 aaacattttc tctttgcatg tcaaatcttt cttgcattaa atcattatgt gcaaactcca
     7621 ccacaccctt aaattctaaa tctaaaattt gtctataaaa acgacttgcc tctataaaag
     7681 aaagctctga aaactcccct aaatttacct taggctttaa gattaaagag cttaaaattc
     7741 cactttcatt tccacttgca cccttgccta attctaaatg tttttcaaaa atatctattt
     7801 caaaacctct taaactaagc tcataagcta aaacagcact tgatatacct gcaccaataa
     7861 tagctacttt tttatttttt aaagatgaaa atgttcttga aaaatacgct tctttgtctt
     7921 taaactcaag ctcattttcc aaataagctt taatcatttc tctttttcta aaacctttgg
     7981 ttttttctac tctaaagcca tattttttta aatttttttg caaaaaactt gccgaagaaa
     8041 aggtgcaaat ttgtgtattt tttttagaaa gccttgccac ttcaaagatt aaattttcat
     8101 caaacatttg cgagttttta tttggagaaa atccatctaa ataccaaaca tcagctttaa
     8161 aatccaattc ttttaaaaca gctatatctt caaaaacaag atctaaaaaa caatcttcaa
     8221 aataaaaacg ataaattcct tctttagcct taggataaaa ttttaaaaat tgttctaaaa
     8281 gctctttaaa ctcttcataa aattctagtt tttgataaat ttctcttaat tgttcttttt
     8341 cgatataaaa agcttctacg ctaatataaa aaagtttttt aggacgctta gaaggggtag
     8401 tttctaaaaa gcgtttcaaa gtaagaaaaa aatttaaacc tatgccaaaa ccactctctg
     8461 cgataataaa attttcttga tttttccatt caaaagaatg agtgtaaaca aatttgcttt
     8521 catttaagcc atctttggaa ttaaaataaa aatcatcaaa atccaaagaa aaaggagtat
     8581 tatccttaaa aattagctta gcttttttca tcggttgtta taaaaataac tctcaactcc
     8641 atcagcaata cccttaacca ataaatcttg aaaagcttta ttggcgattc ttttgccttc
     8701 atttggatgt gtaatatagc caatttcaat caaaattgca ggcatttgcg cacctactaa
     8761 aacccaaaaa ggtgcttctc ttacaccgcc atctacaatt ttatactttt tgcgtgtttg
     8821 agtgagtata tttttttgta catcaatggc tagtttattt gaagcaacga ttttttcacg
     8881 atttaagaaa tttaaaatac tttgttttga gaaataatta atctcttcaa aatccccttg
     8941 attttctttt tctgctgcct ttttacttct ttcacttctt gcaggactta aaaagaaagt
     9001 ttccacgcct tcgctacttt tggcttttgt ggcatttggt gctgcgttag catgtataga
     9061 aataaacaaa tccgctcttt tatcattggc atatttggtt ctatcacgaa gattgataaa
     9121 tttatccgaa cttctagtat aaagcacttt ataaccgcgt tttttaagtt catttccaag
     9181 ttttaaagcc gtacttaaaa ctatatcttt ttcttttaaa cttccttttt tatcacttaa
     9241 agcaccgcta tcttttccac catgccccgc atcgataacc acaagctttc ctgatttgta
     9301 atttgtattt aaagttttac tagaactttg agttgctttt ttgtttgcat tttgatttgt
     9361 agtttgtata taaaaaccta aagtgagatt attattatcc aactccttta aaagtttaaa
     9421 ttctttagga gcactcaaaa ccacacgaac ggtttttgga ttgtattgag taactgtaat
     9481 cacattttgt ccaaaagtaa agctttttct attaccttct aacacaccct taaaacttac
     9541 aacatatcgg aatttttgat ctttggtatc aaatactgct atttcttttt catctaaatc
     9601 atcgcttaaa tttaacacca cagcattaga aattttatcc acatctaaaa catataaagg
     9661 ttcttgattt tctttttcat tattggtttt tttatcttgt ttttttgttt ctaaaacttt
     9721 ggttttaatt tctgtttttt gatcttgctt tttctctgaa attttactaa cttgctcagt
     9781 ctttttttgg ctagtagttt cttttgaaaa aattattttt tcttctttaa aagatatatc
     9841 aataggaatt ttttctttag cataaaccac tatgcgtatg gttttgggat taaattgtga
     9901 aatcactaaa cgatagtcat caaatttaaa ctctttttta cccccttcta aaaccccatc
     9961 aaaatcacta ataaaacgat agtttccttt ttcgtctaaa gcaaaacttt ttaattgatc
    10021 cttatccaaa tctgcattta gttcaaactc tacaccttgg tttgttttac ttgactttaa
    10081 aacataaatt ttatcatcgc tttttgcttt agaaacgata ctgctctttg gtgcttgcga
    10141 agttttagaa tttgtttttt ctgtattttt tatttgttca ttagatgatt ttttttcatt
    10201 tttttgaact gtttttatag gttcaaaagt tgatttttca gtgtcttgag aaatattttg
    10261 aaccttaata tctttaataa cagcctttct taaagcatta atacttgttt cacttatacc
    10321 actttctttt aactcattag catatgactt gtcatctaaa tttaaagtat ttgaactgat
    10381 aatcaatctt tttaaaattt caattttagt tttttcatct tcattaataa cactttgtat
    10441 ataaaggctt ttgagctgat ggtgaaattt tacttgcact tcacttttag aaccgataaa
    10501 atttttatca aaatttgcaa gttcattttc ataaactcca aaaagagttg tgaaaacaaa
    10561 tactaaaaat acaaaaattt tagccattat tcaccattaa ccaatttttc cataagttct
    10621 ttaacactga taagcttatc taaacgatat ccatttgcac ctgtaaagaa aagtcctgtt
    10681 tcttttttgc ctgaccacgc atcaaaaagc ctatctgcta tacaataccc tactttagtc
    10741 gcctcttttc cacgtccaca aggcgctaca caattgctta tacaattaat ctttggaccc
    10801 attcttttat ctaccaaatt taaaagattg gttctaactc cacgagcagg ataacccaca
    10861 ggagatttaa taagctctat atcttcttct ttagaagcta gcaaaacgct tttaaactct
    10921 tcactcgcat cacattcaaa agttcctatg aaacgcgttc ccatttgaac accactagcc
    10981 cctaaagaaa tagcattttc tatatctttt ttatcccaaa ttccacctgc agcaatcacg
    11041 ggaaaagacc cccaattttt agcctcttct accacaggag cgattaattt ttctagctga
    11101 taattcggat ctaagcactg ctcataagta aaaccttgat gacctccact ttttggccct
    11161 tctaaaacca ctgcatcagg taagcgattg taacggcttt gccatctttt gcaaataatt
    11221 tttaaagcct ttgcagatga aatgataggc actaaagcca catcaggaaa atctgcagta
    11281 aattcaggta aatttgtagg aagtccagcg cctgaaacaa tcacattaaa accaacctca
    11341 caagcatcgc gtgctattct tgcataatca ttacttgcac ataagatatt acaccccaaa
    11401 ggtgcatcgc cacaaacttt tcttgcatta ttaatcaaag cttgcaaacc cttgcgtgag
    11461 taaaaatttt cacttccata aggcttagcg tttaattctt tacttgcata ctttctttct
    11521 tcataatatc ctgttcccac agaagaaata atcccaagtc caccatttaa agaaactgca
    11581 gaagctaatc tatcccagct tatgcctagt cccattcctc cttgaaaaat gggatatttt
    11641 atagtatgtt ttcctatttg taagggttgt aaattcattc ttttaccttt aattttgcaa
    11701 attttctttt acctatttgt aagatgtatt ctccttgttc taaatacatt tgctcgtcgc
    11761 taactttttg agaatttaca cttactgcat tagcactgat gcttcttctt gccgcagaag
    11821 tagaactttc caaaccacat tcaaccaaag ccttagcaag ccaaattttt ccttgtattt
    11881 caaactcagc catatcactt ggcaaagcat tttgagaatg aattttatca aattcagact
    11941 tagcattatt agcctcttct ttggagtgaa aacgctctgt aatctctaaa gctaaatttt
    12001 ctttagcttt tttaggatgt aaattgcctt gttctatatc tttttttatt tgcgcaattt
    12061 cttctagact tttttgactt aaaagttcat aatatctaaa catcaattca tcactaatac
    12121 ttaaaatttt agcatacata tcattagctt tttctgtaac accaatgtaa ttatttaaac
    12181 tcttactcat tttgtttaca ccgtctaaac cttcgagtaa aggcatcata atcacagctt
    12241 gttcttttcc tatgttataa actctttgaa gctgtcttcc catcaaaaga ttaaattttt
    12301 gatccgttcc acccatttca atatcgcttt ttaaagccac actatcatat ccttgaagta
    12361 agggatataa aaactcacaa atcgaaatag gactttgctc tttaaatctc ttggtaaaat
    12421 cgtcacgctc aagcattcta gctacactaa aagttgaagt aagctctact atacccgcgg
    12481 ctccaagttc attaagccaa gtagaattaa acttaatctg tgttttttct ttatccaaaa
    12541 ccttaaaaac ctgcgtttca taagttttag cattgattaa aacttgctct ttatccagct
    12601 ttttacgcgt tgcacttttt ccacttggat cgccaatttg tcctgtaaaa tctccaatca
    12661 aaaactgcac aatagctcca tgtttttgca aaaaagccat ttttgttaaa accacgctat
    12721 gacctaaatg taaatcaggc gctgtaggat caaaccccgc ctttataaag aaattttcac
    12781 ccttttcata ataattttta attaattttt ctattctttc ttcatcaata agctctgcac
    12841 aaccacgctt aacttctgct aatatttttt ttatatccat aataaacctt tttaaccttc
    12901 tttataagca tcatttaaag atgtaaaatc taaaatcttg caacgagatt ttaacctatc
    12961 cttgacacta tctggattga tattatcagg aatttccatt gtaatctcaa aataatctac
    13021 cgccgaattt aaatcacttg ataaattaat tgttaataaa tttatctgca ttttagctaa
    13081 aaatgccaaa aattccgcta aaacaccttt tttattttcc aaagaaaaaa tcaatttata
    13141 agatttaggg atgttagaat cccattttat aaataccata tcttgattat tatctatcat
    13201 tttatcagct ctatcgcaaa gcttatgatg gacaatagcg ttaccacctt taacaaaagc
    13261 taaaacagca tcacctcttt ttggatggca gcaaaaatca aaatccacat tagcgatttt
    13321 atggttacaa tatagagtaa aatttcctat tttttgctct ttaatctcat atttatcaaa
    13381 ccaatatgac ttcttggcgt attttttaag accattaact atatctttca aataagcact
    13441 atctgttgcc acttgtctaa tacgtctggc taaattttct ttttctatcc aagtttcaat
    13501 tctgttttta tcaactccaa aaataaaact taacatatta atagaacttg ctagattaat
    13561 ctctctgatt ttttgcttac aaaattccct tatacttgct tttgcttttc ctgttttaac
    13621 actatctatc caagaacagc gataaaattt atcattgcta gtaaccactc gcacaatatc
    13681 gccattttta agctcggtta acaaaggcac tttaatacga tttacataag cactttttgc
    13741 atgaagccct actttggtat gcacttcata agcaaaatca agaaccgttg caccacgagg
    13801 caaagtgaaa atttctccct taggagaata aactgcgaca tcttcaacat aaagactatc
    13861 tttagcatat tcataaagct caatagcatt ataatcttct gcattttcaa gattgtttat
    13921 actttgcatt gaaatatctg taagccaatc aagacgaggc gcaaccacgc tgccatcttc
    13981 tttatatttc caatgagctg ctataccaaa ttccgcaatt ttatgcatat caaaagttcg
    14041 aatttgtgcc tctataatac ttttagcatc aaaaagtgtg gtatgtatag tttgataacc
    14101 attttgttta ggcaaggcta tataatcctt aaaacgcgaa accaagggat taaaatgtgt
    14161 atgtaaaatt cccaaagcta agtaacaatc acttactttt tcaaccaaaa ttcttacccc
    14221 aagcaaatca agaacttctt caataccaat gccttttctt tgcattttaa gataaataga
    14281 atagctatgt ttaatgcgtt tttgaatttc aaaactacct tgtctaaagc cattactcaa
    14341 aaataaaagt tcgattttgg aaataaattc atttaaacct aattgcattt cttgattatt
    14401 ggagttgata taattgtcaa taagcttata ctcatctggc ataagatatt taaaactaag
    14461 atcttccaaa taatttttta tgcttgaaat accaagtcta tgggctattg gggcatatac
    14521 aactaaagtt tcttcgctga ttcttttttg cttatcttct cttagaatat caagagtaag
    14581 catattatgc agcctatcgc ataacttcac aatcaaaacc ccaacatctt caatacttgc
    14641 taaaagcata tttctgaaag tcaaggctga tttagttaaa ctttttttag attttgatga
    14701 aatgagatta tcttctctaa tttctataat tttagtaagt cctaaaacaa gttttaaaac
    14761 ctcagaacca aactgctctc taagttcttc ttcagtgcag tttgtatctt caatcacatc
    14821 atgcaataaa gcagctaaaa tattgctttt attttcactt aaaaatccaa ccagtgttgc
    14881 tactaaaata ggatgtaccg cataaggctc tccacttttt ctaaactgcc cttcatggca
    14941 aaatatacag taatctaccg ctttttcaag aatggcatca tggccacaaa tttcgaaaag
    15001 caaagcctta gcagcttcta aatctttaca attttttaca ttatcgatta attgttcaag
    15061 caataattct tcatcgattg gtttcaacta aaccctctaa agtgatttta ttttctgcaa
    15121 tttcatataa agctatatct gcaagtttat ttttattttt atcaaagtct accaaagagg
    15181 ttgctccatt tgccaattgt tccgctcttt ttgctaccac taaagaaagg cgatatctat
    15241 cattacccat tttttccaaa gcttttgccg ctacttcttc tattctttta tccataattt
    15301 tctccttaat tatttttaac ggttgaacaa aggctagtat caccttgtat gattttaagt
    15361 aaattaccct cttcaaacat attacaaacc acaataggaa gtttgttatc tttagctaaa
    15421 gctatagctg tatcatccat cactttaata ttatcttgca tagcctcatc ataactcaaa
    15481 gtatttaaaa atactgcatc atcaaattgt tttggatctt tatcataaac tccattaact
    15541 tttgtagctt ttattaccat atctgcatca atttccacag ctcttaaaat agctgttgta
    15601 tccgtagtaa aataagggtt tccagtacct gcagcaaaaa ccacaacacg acccttttct
    15661 aagtgtcttt gcgctcttct cataatataa gtttcacaaa atgcttccat ctgaatggcg
    15721 ctttgaaccc taacttcaag tccagagctt tccaaagctt cttgtatagc aatagcattg
    15781 ataaccgtag caagcatccc catatgatct ccacttgtcc ttttaatcaa tccgccctta
    15841 gcagcactta ctccgcgaat aatattacca ccgcctataa ctatgcctac ttctatttga
    15901 ttttttataa gttctttaat ctctgaagct atgaatttta aaatagaatt ttctatacca
    15961 aagccatttt cacccgctaa agcctctcct gaaaatttta ctaaaactct ttttctctct
    16021 tgcattattt ctccttattt aacttgaaat tatattttaa attccattaa atttagctaa
    16081 tttaagctaa tgagttccaa aggattgata tgaaaatttt tttgagttac ttcaaaagta
    16141 agatcatttt ttattctacc cactacggca ccttttttaa tattcttacc aactttaata
    16201 ttaggagcaa tcttatctaa atgtgcgtat attgtatgta tgccattatc atgttcaaca
    16261 ataacaactc gagctaacat actagtatct ttagcaaaaa ctatttttcc atctagcaca
    16321 tttttaacaa ctgcatcgct tttattgctt cttaaaacta cattctcgtt aaaaatttta
    16381 agattgtaaa caggatcaac ataatttcca aatttttgct tcacagtaaa agaatccaat
    16441 ggagctatgg ttttttttcc tgtgtaacgc ttgactgaac ttccttgata gcttgaacct
    16501 aattgcctta tttgttgatt attttttact attttagtat catttttgtt taaatttgca
    16561 ccttctttat tattaataat ttttaattga tttaatgttt ttctaagctc ttcttgctga
    16621 gcttgtaagt catcgagttt ttttgcatat atggttcgat ctgttttttg tttattaatt
    16681 tcgctaattt gtttttgttt taaactttga agcttgacta attgagcatt gtaatcctta
    16741 agactatcat tgattttctt aatctgagct tgtttatcat caataagtct gcttactccc
    16801 tcataatctt tagaaatttt aaaaatttct tcatttaaaa ctttgtttaa actccctaaa
    16861 atttcaaaag ccacaaaact ttcttcactt tcgatatagc cttgaggaat aggtaaatca
    16921 taggcaaaat ctttagccat caaagatata agcttacttt ccatatttga tttactttta
    16981 agcaaatctt cattttggct tgcaagggtg tttaactctt gattttgagc cttagcactt
    17041 gcttcaagct tagaagtttg tgaatttaag ctttcaattt gcaaacttaa atctttcaaa
    17101 cttttttcac catttaaaat atcactagcc aaatcttcaa gttttttatt tagctgttct
    17161 tgtatgcgtt tattttcttc taaacttttt gttttttcat ttatagcgtt tgctaaactt
    17221 atatcaacaa acaaaaaaaa acaaaaaaag ataagaatat tttttctcat cttttaacct
    17281 tgaacataac cgtatttaca cacaacaagc aaataaacaa agtagctaaa aaaattaaag
    17341 tcaaatgcaa aataaaatta ataggtggaa aaataatatc tacagccttt aagctttctt
    17401 ggataataga aagatcaaaa atttgggtaa aaaaggcaag taaaataaca aaagcgataa
    17461 aacaatcaac tacaaccacc ttataaagca taaaagatct aaaccaaaac ggagctccaa
    17521 ataaacacat aatttcaata cgatcggtat gttcataaag ccaaattctc atctgcttta
    17581 aaaacaaaac aaaggcaagt aaaataatga taaacaaaaa taaccaaaaa acaaatttca
    17641 tcaaaataag caaagagtat atcttatcat gagttttgga aaaagtttca accttactaa
    17701 cacctacaat atttaaaagt tgatttttaa tcgaatttag ttcattttga tcgggcaaag
    17761 aatttaattt taaagtataa aattttggta gagaatcttt taaaactttc aaattctttt
    17821 cagaaacatc atttttcaaa cgatcaatta aacccttagg atctaaagat tcaagtccag
    17881 caaaaaatgg tacttttgtt tttactacat tctgatcaag ttcagttttg ctgacaacta
    17941 taatattata atctttatta acaagttctt cataatgctt taaagttgca tttgtaacca
    18001 aaataaattc aaaagcaaac atcataaaaa gtaaaggtaa aattaaagat aaatgtgttt
    18061 taaaaaattt cattcatttt tccattttct atattaaaac gacgataatc cactcttaaa
    18121 ttactaggaa ttctatgtgt taccactata acacaagttc ctaaaagctc tctagcagat
    18181 tttaaaagag tccatataat atcagaagaa tactcgtcca aatttcccgt tggctcatcg
    18241 caaagcaaaa gctttggatt atgagctaaa gccctagcca tagcgacgcg ttgttgctca
    18301 ccaccgctaa gttgattagg caatttatct gctttaaaag ttaaatttac atgctttaaa
    18361 agcttagtag cttgatcata gcatactttt ttgctataac ctttaatcat taaaggcaac
    18421 ataacatttt tttcaacact atattcttgt acaagtttat aatcttgaaa aataatccct
    18481 attctttgac gtaattttaa aagttctaaa tttccaattt tattcatcaa agatccacat
    18541 acttcaagtt taccagaaat aggttctaaa tctccataaa aagactttaa aagcgtactc
    18601 ttaccactcc cacttttacc cgtaataaaa acaaaatcat catccttaaa agcaaaactc
    18661 gcttctttaa taactagttc atcataacct aaagtaagtt tatttgcttg gattaaatta
    18721 ggcatccttt ttccttaatt tcccttttta aatttttaaa ttatgcttta tttttgctta
    18781 attttcaaga aaaattatat tttaaactga acttttaaaa tttcttttaa ttcatttatc
    18841 gctttaatat tttcttgaat tttaaatggc tctttaaaag caaaatcaat cgttttatca
    18901 agatgcaaat aacaatgttc aggcttatta aaagctccaa aagcaacctt taaaagcaaa
    18961 ttctcatctt gtttatagat gctttcaaaa tgcaagaaaa aatcatcttt ttttatagta
    19021 atatttttaa agttctgctc tatttttttc aaatcctctt tagaaaattc aaccgatgag
    19081 agattaaatt catttaactc atagttttta cactcttggt taaaattcca cacccaaaga
    19141 tcatatatat ttttttcttg ctttttccat ctatcttcat atttgcttga aatttctaaa
    19201 ttttcatttt ttctaaggct aaattttgga gcaggaaaag tcaaaaattg ctctaaagta
    19261 aaattaaaat actcaaaact atctgttcta agctcaaaac gaccattttg aactaaaacc
    19321 ctagcacatt ctttgcaaaa atctttccca ataactcgcc tatgaggctt tttgtcccaa
    19381 ggaacaggga aatgtaaaaa aatcttttca actgattttg attttaatac actcaataac
    19441 aatctcgcat cactttggat tagcaaaata ttatttacat tttgtgcttt agcaagttta
    19501 gccacttgag ttaaagctgg gttgtaaatt tccaccccta aaattaaaac atttggattt
    19561 tcttttgctt gataaagcaa atgtcttcct gatccaaagc ctatttctat ataaatttta
    19621 ccttgaagtc tagataaaag ctcatcaaaa ttatcaacga taaatggtgt tttttcaatt
    19681 aaagcattat ttttaagtcc aaaagcttca ttgataatat cctcacaaaa accttcttta
    19741 aagattttta aagccttttg caaataacct attttagaag gttttgtatg tttatcgcct
    19801 ttaatcacaa aaccattttg tgctttttta atctgcagaa aaaaactctc ttcttgaacc
    19861 tttgtataaa taagactaac attatcattc ttagcaagcc aaagaaattc aacatcatcc
    19921 ttactataag gcagatttat ttctttgatc tttttacttt taaaatttgg cactactgag
    19981 ccgccttaac tttgcttgaa ggttctgaac gaagcccggc tgaatcaata gcaataactt
    20041 cataactata ttccacccct ggcaaagctt ttacatcttt taatcgcttt tctttaatgc
    20101 ctttaaaaac tgcattttgc tccccgccat agcgtcttac ttcatactca acagctctag
    20161 tatcattatc actccattct aaatttatcc cttcgcttgt actttgagcc aaaataatac
    20221 taggagccaa agggttgcct aaagttttac cttctacacc atcttttggc ataggacttt
    20281 caagaccatc tttatccacc attgttactt tataatactt gcttttacct gctccttcta
    20341 ctatatcctc ataagaattt ttatcagtct ttgccaaaac actaaaagga aggaagcttg
    20401 agctcgtaga ataaacttta taataagaaa aatcttcata cgtaggagca tcccaagtta
    20461 aaatgatttt actagaacca tctgtgctag cacttaaatg ctcaacttga ggaggtaaag
    20521 ccttgcttgt agaacttaca acttgacttg acccactctt tatcccatta aaactcacag
    20581 caataattct ataacttgaa ttttcattag gctttaaatc actatcgatg tattcagcgt
    20641 ttaaacgatt ttttacttct gcaatttttt taaattcttt atcatcacct ttggttcttt
    20701 caataatata agaatcaacc ctaaaatcag gatgcggacg ccaaataagt ttaatacgat
    20761 taggcaaatt agtcacagct tgaacaaaag gaacagcttc aagtcttgga gctgtgctca
    20821 cttctataac cttgccatct tctgaaattt gtccttgctc attaaagctt ttcatcatat
    20881 aacgatactt agtaccaggc tctaatttag tatctacata atgagtttga aacttatctt
    20941 taatagtgcc tacaagttta aaatcaggat tttcatcact agaacgatac aaataaaatc
    21001 ctttaatatt ttcattatat aaaggctccc attcaaaagc aatattactc atatcactaa
    21061 gactttttaa actttcaacc tttggcaagc tttcatttac agcaggctct ttacttgaag
    21121 ctagcgaatt catttgcgaa acactacaag cgctaagcaa aagagttaaa aaactcaagt
    21181 aaaaactcaa gcgaaatctt ttcatcattc tctcctaaat taatttgttc aaacataata
    21241 tttttaaaat cttccatcaa aggtgcttta acaaaaattt gttctttggt ttttggatgg
    21301 ataaaataca aaaaataagc atgtaacatt atcctacaat catacttacc cttataacca
    21361 tacaaactat cacctaaaat atagcgattt aaactagcca aatgcgctct aatttgatga
    21421 gttcttcctg taaaaagctt agcagccatc aaagttaaat tttcagtttt tactacattt
    21481 ataaaagctg attttgcgtt tttactgaat ttattttcct tatctatggc tattttttta
    21541 atagcattag aaggcgaacg cattaaaaat ttttctacta taattttatc ttcttttagt
    21601 ggcaaatcaa ttaacgcaag gtaaattctt cccatgcttt tatctgcaag ctgttcactt
    21661 aatttttgat gggtgaaatt atttttcgct attagtatag ctccgcttgt atctttatct
    21721 aatctatgga caagaccagc tcttatctct cctcctaaat ttgataaagt atattttttt
    21781 tctattaacc aatccaccaa agtggcattt ttaacgctac ttgctccatg aacgactaaa
    21841 tttgaaggtt tatttaaaac aagcaagtct tcatcttcgt ataacacatc aatatcaaaa
    21901 tccacttcaa actgaggttt tatctcattg caaagcttta aacttgcaat agaaataata
    21961 tcaccatttt taagcttaaa tgaattttta tcttgaattt tatcattaac ctgtacacaa
    22021 tctttttcta taagtaaagc aatttgattg cgactttggt ttaatttttt agccaaaaat
    22081 acatcaagcc ttgaattttc atctactaaa aaagtttgca ttttttcctt agaggttttg
    22141 ataaatttaa aattttagtt tataattata gctttatatt accaactgaa ggcaaatttt
    22201 gtttagatta gatagaagaa ttttaactca ttttgactat atgcaaccca ttttattttt
    22261 acccataatt cttatttcat ttttcttaat ctttgaagct aatccttttt tagcagaaaa
    22321 acagtttgtt tatgcctgtg tgggattgtt tgcttttatg gtttttttct tctttcccat
    22381 aaggaaattt atttggatta ttcctgttgc ttattggatt aatatttttt tattgctaag
    22441 cgtagatatt tttggggttg aaaaattagg tgctaaaaga tggcttgaaa ttccttttac
    22501 tcactttact atacaacctt ctgaaatttt taaacctagt tttattttaa tgcttgccta
    22561 tcttatttat caaaatcctc ctccaaaaaa tggatacaaa cttaaacaat tcatcaaact
    22621 tagcttttac atcatcttgc cttttttgct aattgcaaaa gaacctgatt taggaagtgc
    22681 tatggtttta ctacttgttg gttttggagt gctttttatc atgggagttc attataaaat
    22741 ttggttaagt attgttatag ctataagtgt tagctctcct attatttata cacatctttt
    22801 aaaaccctac caaaagcaaa gaattcatga ttttatttca gaaaaaccaa gttatcaagt
    22861 agcccaatca atgatagcta ttggaaatgg tggtttaacc ggaaaatctc aagatgaagc
    22921 tacgcaaact cattttaaat ttttacctat ttcaactagt gattttattt acgcttacat
    22981 gatagaaaga tttggattta ttgggggatt gacattaatt atattttata ttttacttat
    23041 ttttcatcta cttagtttaa attataaact taaagatgat tattttgcta gagttgctat
    23101 taattgtgtt gcattattta tttttattta tgcggcagta aatatttcaa tgactatagg
    23161 ttttgcacca gtagttggga tccctttgcc tttttttagt tatggtggaa gttcttttac
    23221 tatttttatg attttttttg gaattttaca gcatttaatc acttttagat atttttggac
    23281 ggatataaag gctaaataaa atatttttaa gcattaataa gatataattt tatcttttaa
    23341 ttcaacttag gcggatttat agctcagttg gttagagcaa ccggctcata accggttggt
    23401 cgcaggttcg agtcctgcta aatccaccat tctacatata agctatagac tctttcttta
    23461 aaaaataact tttagttctt taaatatttc aatcttatat aaaaaaagta tgtgatgtga
    23521 ttttttgaaa gataaagtgg tggttagagg cagaatcgaa ctgccgacac gcagattttc
    23581 agtctgctgc tctaccgact gagctatcca accacaatgt ttgataaagt aaaaatgtaa
    23641 ttgtatcttt ttttctttaa tttaagttta aatacaaaaa taaaatttta tttcccttaa
    23701 agttttaata agatagaata cccgctttag atcattatca aatggaaatt ttttgaaaca
    23761 atttggacta gatagacgaa cttttaaaat tttactagct ggttatatta ttattgcatt
    23821 gtttggggct ttattgctac attcaagctg ggcacataca actcctatta attttttaga
    23881 tgcctttttt acaagcacat ctgctgttag tatgacagga ttagtagtta agaacactgc
    23941 ggttgatttt accttagcag gacaaattat tatcttagct ttggtgcaaa ttggaggctt
    24001 gggatatatg ggtataggtt tatttgttta tatactcata cgcaaaaaag ttggttttag
    24061 tgcaagaaat ttactaaaag agtctttatt ttatccatca atggatggtt tatttaaatt
    24121 ttttaaaaag gttttgctgt tcatttttac tatagaattg ataggtgcta tacttctcac
    24181 catgcgtttt gcccttgaaa tgaattttaa gaaagcttta tggtttggaa tttttcattc
    24241 tattagcgct tttaataatt ctggatttac tatatttgaa catggattta tagcttataa
    24301 acatgatata gcaattaatc ttattatcac ttctttgatt attattggag ggcttggata
    24361 ttttgttttg gttgaattat acttttttca aagaaaaaaa ttgcaaaatt taagcctaca
    24421 tacaaaaatg gttgttgttg caagtatttt tcttattttc tcttcaacgc ttattatttt
    24481 tgcttttgaa tactcaaatc ctcaaactat aggacatttt tcattttttg ataaaatttt
    24541 aagctcatat tttatcgcta ttaattaccg cacagcagga tttaatacct tagatatggg
    24601 acatttgcat gatgcaagct tattttttgg atcattgttt atggttattg gtggtgcacc
    24661 aggtggaaca gctgggggta tgaaagtaac aactgtaatg gttttattgc tctatgctta
    24721 ttggagtatc cgcgatggaa gagttagaat ttttggacat gaaattccaa gagaaactat
    24781 atctaaagct tttattatag ctgtaggttc agctgtttat atagtaatag ctgttatttt
    24841 gctttccttg ctagagtcaa aatttgattt tatagccttg ctttttgaaa cttcttcggc
    24901 ttttgcaacc gtaggaattt cagtaggaaa tggtggaact ttatctttat gcgctttgtt
    24961 tagtgatcct agcaaggtga ttatcatcat tatgatgcta agtggtagga taggtgtttt
    25021 tgctttttta ctctcggtat tcaaacaaga caaagctatt catttaaaat tccctgaagg
    25081 aaaggttaat ttataaaggt aaaatcgtga aaaatcttaa ttatggaatc ataggacttg
    25141 gaaaatttgg atcagttgta gcagatgaac tcattgctgg aggtcatact gttatcgttg
    25201 cggataaaga tgaggaagct ttaaaaagca tacaaaatcc tccaagctat gcttatattt
    25261 tagattctac aaatatttca gccctaaaag aagcaggctt tcatgatgtt gaagttgtta
    25321 ttgttagcat aggagaaaat gttgaaaaat caatccttac tcttatggcg cttaaagata
    25381 taggtgttaa aaatatcatt gctaaagcaa cctctaatat ccatggtcaa attctttcta
    25441 agttaggtgc aacaaaggtt atttatcctg aaaaagaaag tgctaaaaga ctagtaaaag
    25501 aatttttaac taaagatgct gattatgaag tttttgatct ttcagcaaat actatacgag
    25561 ctattaagat caatatagat gaaaaattag caggaaattc tttaaaacat gtagcacaaa
    25621 atatgaaagt gatttcttat aaaaaattaa atagtgactg ggaaatacta cctgatttag
    25681 aaaccacgac agtttatagt ggagatgttg taatactcct tggaacagtt aaagaactta
    25741 gagaatttga acactaagca agatttaaag ccttacaagc ctttacaaaa cgctttaagg
    25801 ctgttttttc tttggtagaa attttatgat atataacttc atctaaataa tatctaacat
    25861 cttttatatc taaatccctt gttttggcat aattttgcag tatataataa ggaattttaa
    25921 tctttgtttt tggaaatttt ttcaaaattt gtttatataa agcttttttt tgcacacaag
    25981 aaaatctagc aaaaacaaaa ggcaatcctg ttttttcgtg ccattttgca cataaatcga
    26041 tatatttaga aggatctttt agataaagct ttaaagcctt atcacctata attacttttc
    26101 catcttgttt taatacttta gccagagcgt ttgaagttgc tgaacttgga tctttggcat
    26161 ttgatgtatt tttttctact aatacactta aaactctttt attggcacaa atacccaaat
    26221 ctaaattttt atattttttt ctagcacttt ctatgcttga aatgatagct gcatcaattc
    26281 ttctataaaa taaatcttta tttagcttac ttggaactcc ttttttatac tccatacttg
    26341 ctttataacc attaggtagg ggatatttct taagatatat atgtaaaggt aaaagattaa
    26401 tataatcaat ttttccaaaa atcatctctt ttaaagagtg ttaaacactc tatctcctgc
    26461 atctccaagc cctgggataa tataaccttt ttcatttaaa ccttcatcaa tacaagccac
    26521 aaaaacttct acatcatcat gcatttggct aaattttttc aaaccttgtg gagcagcaag
    26581 tatggatata aattttattt ttttaactcc ttggcttttt aaaaaattac aagcatctat
    26641 agcagtccca cctgtagcaa acataggatc tataacaata gcagtgcgtt tttttgcatc
    26701 tttgggaagt ttttgaaaat aaaaatccgc ctttaaagtt tcttcatttc tcacaaaccc
    26761 caaaaaccca acacttgcat caggaatcat cttaaaaaca ctttcaagca ttcctaatgc
    26821 agctcttaaa ataggacaaa tcataatctt ttcatcaagt ttttttacta tagttttttg
    26881 tataggtgtt gaaatttcaa tttcttttaa agaaaaatct ttactcactt caaaaagcaa
    26941 aaaagatgaa atttcatcga ttaacatacg aaattgaaag ggctttgtct ctttagccct
    27001 taaaattcct aacttatgtt cgatcaatgg atgattgata caatgaatat ttttcatttt
    27061 aagctttcaa aataagcttt ctcgttaaaa ttttttacct tagccacacc atcttttacc
    27121 gcagctgctg ctacagctgt acttactgca gcttttactc tttcatcaaa aggttttggt
    27181 atgacataat ctcttccaaa ttctaaggta cttaaattat aagccttttt aactgcatca
    27241 cttacaggaa gttttgcaag atctgctaat gctttagcgg ccgctacttt catattttca
    27301 gtgattttac ttgcacgcac atctaaagcc ccacggaaaa taaaaggaaa acctaaaaca
    27361 ttattgattt gatttggata atcacttctt cctgttccta caatcgtatc ttttctaagt
    27421 ctagctacat cttcaggcat cacttcagga ataggatttg ccaaagcaaa aatcacagaa
    27481 tcttttgcca tgcttaaaac catttcatca tcaagaattt ttggcgcact aagtcctagg
    27541 aaaacatcag ctccttttaa aacttctttt aaagtctttt ccttagaatc aacagcaaat
    27601 tcaagctttt gaggagttaa atcatttcta tctttagaaa tcactccttt gctatctact
    27661 aaaataatat tttcaacccc taaatttcta tacatcttag cacttgctat acctgcggca
    27721 cctgcgccac ttacaaccac cttaatgtct ttaaattttt taccgcttat ctccattgca
    27781 ttcataagcc ctgcagttga aataatagct gttccgtgct gatcatcgtg cattacagga
    27841 attcctaaat cttgtaaagc cgcttcgatt tcaaaacatt ttggagcagc tatatcttct
    27901 aaatttatcc cgcccacagt tggagccaaa gctttgcaaa aatttacaat ctcttccaca
    27961 ctatgaacat caatttctat atcataagca ttgacatttg caaatttttt aaacaaacaa
    28021 gccttacctt ccataacagg ttttgaagcc tgcgctccta tgtttccaag tcctaaaaca
    28081 gcagaaccat cactaactat agctactaaa ttagccttat ttgtataagt ataagcaagc
    28141 tcattatctt tagcgatttc aaggcaaggt tctgcaactc ctgggctata tgccaaagat
    28201 agatcatggc ttgtagccat tggcttactt ggtacaatat caattttccc acctaaatgg
    28261 tattttaaag cttcttcttt taaattcatt ttattttcct ctaactttta aaaaattttc
    28321 tattcttttt ttgcactcat caacctctaa aaattctaat acttcaaaaa tactaggact
    28381 taccgcactc cctgttaaag ctatgcgtat aggctgagcc aaatctttta actttgcttc
    28441 ttttttttct aaaaaatcat ttgtaaaatc ttcaaaatct ttacctgttt tttgatcttt
    28501 aagtgtatta gcaaatgctt ggagcaattc taaattattt ttgttaataa atttttgtac
    28561 tgcattttca tcataatttt gcggcgcatt aactatactt tttgcaccat tgataatatc
    28621 atgcaaggtt tttgcacgct ctcttaataa atcaagtaaa aatcctgcct tttcataaac
    28681 agataaatca aagccaagat ccttaagctg acggttaatc tcttcaaaag gcaaagtttt
    28741 aatataatga gcgttaagcc attcaagctt tttagcatta taacaagatg cgcttttatt
    28801 aatatgataa gggtcaaaaa gttttttcaa atcttctaat gaaaaaacct catcatcacc
    28861 atggctccaa cctaaacgca caagaaaatt aagcaaagct tgaggtaaaa ttcccatttc
    28921 tttgtattcc ataacatcag ttgccccatg tctttttgaa agctttttac catcttctcc
    28981 atgtatcata gccacatgaa aaaatttagg aattttaaaa cccaatgcct cataaagcac
    29041 aatttgttta ggagtatttg aaagatgatc atctccgcga atcacatcac ttacccccat
    29101 taaagcatca tcaataacaa cagtaaaatt ataagttgga gttccatcac ttcttgcaat
    29161 gataaaatca tccattatat cctctgcttt aaatctcacc tcgcctttaa ccccatcttc
    29221 aaaaacaatc tcaccgcttt gaggtgcttt aatacgcaca acaggctcta taccctgagg
    29281 tggcgtgcct gtaaattctc tatatcttcc atcatatctt gggcgctctt tggcagcttc
    29341 ttgcttggcg cgcaattctt ctaattcttc tttactcata taacaataat acgctttacc
    29401 ttcatctaaa agctttttaa catattcttt ataaagatca aaacgctctg attggtaagt
    29461 tacttctcca tcatgttcta aaccgcacca tttaaaagct tcgataattg ctttagtagc
    29521 ttctttggaa tttcttttta aatccgtatc ttcgatacga agtaaaaaat ttccgccatt
    29581 ttttctagcg tataaataat tataaagagc tgttctaagt ccacctatgt gcaaataccc
    29641 tgttgggctt ggagcaaaac gcgttgtaag tttttcgtgc attttttgcc ttttcttaaa
    29701 tttttattga tataatgcga tatttatact taaataaagg tttgaaatga aaaaaatttt
    29761 attaagtttt gcattttttg caagtttagc tagtgcaaat accattaatg ctatagctgt
    29821 agttgtagac aaagagccta tcacaactta tgatatagat caaactatga aagcgcttaa
    29881 aattgataga aataaagctt taggcgtact catcaatgaa aaaatggaaa tttcacaaat
    29941 gaaacaacta ggtattgtag tcaatgatct agagcttgat gatgctataa ataaaatgct
    30001 tgctcaaaac aaaacgactt taaatgcttt caaagcaaat ttaaaatcca aaaatcaaag
    30061 ctatgaacaa tttcgtgcaa attttaaaaa agatttagaa aaaagaaagc tttatgaaaa
    30121 aatcgcaagt atggcaaaaa ctgattttag tgatgatgga gcaaaaaaat ttttcgaaca
    30181 aaataaagat aaattcactt tttatacaca aattaatgca aatatttatc tatcaaacaa
    30241 tcctcaaact ttagaaaata tcaaaaatac aaaaaaaaca atccttaaac cacaaaatgc
    30301 atctttaaac acaagtaatg ccgatccaag acttttaggg cttttatcac aaattcctgt
    30361 tggaggcttt tcccctgttt taaatggaaa aaatggctat gaactctatg aagttaaaag
    30421 caaagatggg gcacaaactc ctgaatatga acaaattaaa aatgaagttt taaacgctta
    30481 tgtaagcgaa caaagacaaa atttcataca ggattatttt gataaactcc gctctaaaat
    30541 caatatagaa tatttaagat aaaaattaca attaaaattt ccctttaata gggaaatttt
    30601 aatgtcttgc aagataattt gtatcgtagt tattattaat aaaatcagga ttttccatca
    30661 tagaaagatg aaaatctttg gttgttttta tcccacttat aagcaactca tctaaagcta
    30721 ctttcatttt tgcaatagct ttattacgat cttctgccca aactacaagt ttgcctatca
    30781 tagaatcata ataaggaggc acgctatagt cttgataaca atgactttcc attctgacat
    30841 tgcgtcctgc gggtggaatg tatttagtaa tcttacctgg acttggcaag aaagttttgg
    30901 aatcttcggc tgtgattcta cattctatag aatgcccatt taatttaata ctttcttgag
    30961 atggtaaagc ataaccttct gctactttaa tcatttgttc tatgatatca atctcactta
    31021 ccatttcact tacacagtgt tcaacttgca aacgcgtatt catttctata aaataaaaat
    31081 ccaaattttt atctaccaaa aactcaaaag ttcccgcacc ttcatatcct atagctttag
    31141 ctgccttaat agcagtttca tgaagtctag tgcgtgtttt ttcatcaagc aaaatcgcag
    31201 gggattcttc tataagtttt tgatggcgtc tttgcataga acaatctctt tcgcccacat
    31261 gaatcacatt gccaaaacta tctcctataa cctgcacttc tatatggcgt ggattttgta
    31321 tgtatttttc catatacata gttccatcgc caaatgctgt catagcctcg ctttcagccg
    31381 accaatacgc tttttcaaga tctttttcat tttcaaccac acgcatacca cgaccaccac
    31441 cacctgcagc tgcttttaaa atcacaggat aacctatttc tttggcaagt tttttagctg
    31501 cttcagctcc tgccaaagcc ccatcgcttc ctgggatcac aggtacgcct gctctttgca
    31561 tgacttgttt tgcttttgat ttatcactca ttaaattcat agcttccaca gaaggaccta
    31621 taaatttgat gttatgttta gcacaaattt caacaaaatt ttgattttca cttaaaaatc
    31681 cgtatcctgg aaaaatcgca tctgcttcag caatttcagc tgctgtaata atagctggga
    31741 tatttaaata gctttcagaa cttcttgctt tgcctataca aatgcttgca tcagcgtatt
    31801 ttaaatacaa agcatcttta tctgcttcag aatacacaca aattgctttt ttacccattt
    31861 ctttaatcgt tcttaaagca cgcagtgcta tttctccacg attagcaatt aatatgcttt
    31921 taatttccat tttataattt ctccaccgca aataaaggca ttccaaattc tacaggctga
    31981 ccatcagcaa ctaaaatttc agcgattcta caatcaaatt ccgcttcaat ttcattcatg
    32041 attttcatcg cttcgataat agctatagta tcgccttttt taaccgtact acctactttt
    32101 acaaaaggtg ctgcacctgg acttggagct tgatagaaag ttcctaccat agggctgttt
    32161 atacttggtt tgtttgattt tacactttga ctaggttgag cttcgtttac aacgcttaca
    32221 ttgataggtt gtggagctgg aactggagga caaacaggag ctggaacgtc acaacacata
    32281 tctctttcaa gttctatttc aaaaccatct tgttctttga tcttaatttt actaatattt
    32341 gcttcagcaa aaaggtttac taactcttta atttcttctt ttgtcataaa attctcctaa
    32401 aatttaagaa cttaatcttg tattatataa aaaaacttaa aatttaactt taaaaaagaa
    32461 aaaaatcata aaaaatatag attttttagg ttataatcct tacaaaaaat tacaaatatt
    32521 aaaaggttaa aaatgggttt aaaagcagat aattggataa gaaaaatggc attagaacac
    32581 aagatgatcg aaccattttg cgaagcaaat ataggaaaag gtgtggtaag ctatggactt
    32641 tcaagctatg gttatgatat acgtgtaggg cgtgagttta aaatttttac caatgttaat
    32701 tcaactgtag tggatccaaa aaatttcgta gaagaaaatg tagtagattt tgaaggcgat
    32761 gtatgtatag ttcctgcaaa ttcttttgcc ctagctagaa ctatagagta ttttaaaatg
    32821 cctgatgatg ttttagctat ttgccttggc aaaagcactt atgcaagatg tggcatcatc
    32881 gtcaatgtta ctccttttga accaggtttt gaaggacata tcactataga aatttcaaat
    32941 actacgcctt tacctgcaaa aatttatgct aatgaaggca tagcacaagt gttgttttta
    33001 caaggcgatg aaaaatgcga caccacttac aaagataaaa aaggcaagta tcaagctcaa
    33061 acgggcataa ccttgccaag aattttaaaa taggaacact tattgcttta attttaaaaa
    33121 aacttaagca aaggaaggca aaatgtttaa caaaaaaaat atcttaatca caggcggaac
    33181 aggctctttt ggaaaaacct atactaaggt tttgctagaa aattataaac ctaataaaat
    33241 catcatttat tctcgtgatg agcttaaaca atttgaaatg gcaagcgttt ttaacgctcc
    33301 ttgcatgcgt tatttcatag gagatgtaag agacaaagag cgtttaagca ctgctatgcg
    33361 tgatgtggat tttgttatac atgctgctgc gatgaagcat gtgcctattg ctgaatataa
    33421 ccctatggaa tgtataaaaa caaacatcca cggcgcgcaa aatgtcatcg atgcttgttt
    33481 tgaaaatggg gttaaaaaat gtatcgctct tagtacggat aaggcttgca atcctgtaaa
    33541 tttatacggt gcaaccaaac ttgcaagcga taagcttttt gtcgctgcaa acaatatagc
    33601 aggcaacaaa caaacacgct ttggtgttac aagatatggc aatgttgtag gttcaagagg
    33661 atcggtagta cctttcttta aaaaactcat cagcgaagga gctaaagaac ttcctatcac
    33721 cgatacgaga atgactcgtt tttggatcag ccttgaagat ggagtaaaat ttgtactgag
    33781 taattttgaa agaatgcatg gaggagaaat ctttatccct aaaattcctt cgatgaaaat
    33841 caccgatcta gcccatgctc tagctcctaa tttaagccat aaaatcatag gcataagagc
    33901 aggagaaaaa ctacatgaaa tcatgatttc aagcgatgat agccatttaa cctatgaatt
    33961 tgaaaactac tatgctataa gcccgagtat taaatttgta gataaagata atgactttag
    34021 tatcaatgcc ctaggcgaaa aagggcaaaa ggtaaaagat ggtttttctt atagctcgga
    34081 taataatcct ttatgggcaa gcgaaaaaga acttttagaa atcatcaatc acaccgaggg
    34141 tttttaaaat gcttacttat tctcatcaaa acatcgatca aagcgatata gatacgctta
    34201 caaaagcttt aaaagatgaa attttaactg gaggtaaaaa ggtagatgaa tttgaagaag
    34261 ccctttgcga atatgtgggc gtaaaacacg cttgtgtatt aaactcagct acttcagctc
    34321 ttcatcttgc ctacacagca ctaggtgtcc aagaaaaaat cgttttaacc actcctttaa
    34381 ccttcgctgc tacggctaat gcagccttaa tagctggagc taaggtagag tttatcgaca
    34441 ttaaaaacga tggcaatatt gacgaaaaaa aactagaagc aagactttta aaagatagta
    34501 aaaatatagg agctattagc gtggtggatt ttgggggaaa tagcgttgaa atagatgaaa
    34561 tttcaagcct tgctaaaaaa tacaatatcc ctttaatcga tgatgcaagc catgctttag
    34621 gtgccttata taaaagtgaa aaagtaggaa aaaaagccga tctttctatc ttttcttttc
    34681 atcctgttaa acccatcact acttttgaag gcggggctgt ggtgagtgat aatgaagagc
    34741 ttatcaccaa aatcaagctt ttaagaagcc atggtatcat taaaaaaagg ctttgggata
    34801 gcgatatgat agaacttggc tataattacc gcttaagcga tgttgcttgt gctttaggga
    34861 taaaccagct taaaaaactc gatcacaatc ttgaaaaaag agaagaaatt gcaagttttt
    34921 acgataaaga atttgaaaaa aatccttatt tttccacgat aaaaatcaaa aattataaaa
    34981 aaagctcaag acatttatac cctatcttgc tttttcctga attttattgt caaaaagaag
    35041 aactttttga aagcttgctt catgcaggag ttggtgtaca ggtgcattac aaacctactt
    35101 atgagtttag tttttataaa aaactcttag gagaaataaa actccgaaat gcggataatt
    35161 tttacaaagc cgagcttagc ataccttgtc atcaagaaat gaatctaaag gatgcaaaat
    35221 ttgtaaaaga tactttattt agcattcttg aaaaagttaa aaagggatat tgtggataag
    35281 ctagacttta gaagtcaaga ttttagccaa actggaaagg ctatgtatga actagcttgt
    35341 gaactttttc ctatccctag aagcatcaca gggcaaggtt ttagagctag tttagaactt
    35401 ttaaataaaa ctctgggggg gggtatactc aaatttcact ctataaaaag tggtacaaag
    35461 gtttttgact ggatagtccc tgatgaatgg aacgccaaag aagcctatat catcactcca
    35521 gaaggagaaa aaatttgtga ttttaaaaag cataatctac accttctaaa ctatagcgaa
    35581 gccatcaatc aagaaatcga actagaagaa cttcaagatc atctttactc catagaagaa
    35641 atgcctgatg ctattcctta tgtaacgagt tattacaaaa ggcgttgggg attttgtctc
    35701 acgcataatg aaagaaaaaa actcaaaaaa ggcaaataca aagtctatat caatgcgaaa
    35761 catgatgaaa atggggtttt ggattatgct gattttatcc tacctagtac gcaaaattca
    35821 aaagatgaaa ttttaatttc aacctatctt tgtcatcctt ccatggcaaa taatgagctt
    35881 agtggtcctg tggtggctat tttcctagca aaatggcttt taagtttaaa aaaaagaagg
    35941 tataattacc gctttgtcat cattcctgaa accataggct ctatagtcta tcttagcaaa
    36001 catttagagc atttaaaaaa acatgttaaa gcaggctttg tgctttcttg cttaggcgat
    36061 gatcatgctt actcactcat acacacaccc aaagaaaaca ctctaagcga taaagttgcc
    36121 ttgcatacgc ttaaaaataa agaaaatttc aaagctttta gttttttgga tcgtggaagc
    36181 gatgaaagac aatacaatgc tccgcttgta aatcttggca ttgtaggagt atgtcgcaca
    36241 agatacctag aatacgaaca ataccacacc agcaaagatg atctcaattt tatctctgaa
    36301 aaaggtttaa tgggtggact tcaaagcatg caagaaatga ttttaaatct agaaatcaac
    36361 gccgtatata aaaacaccat agtatgcgag cccaatcttg gcaaaagagg actatatcat
    36421 acccttagca ctgccaatga cattccttta gcttgtaatt ttctagctta ctgtgatgga
    36481 gagaatgata tcatcgatat agccaatatc ttaaatatgc aagcttatga atttaaagaa
    36541 cttttgaaaa aaataaaatt ttatggacta gtaaaatgaa atatttttta gaacacaatg
    36601 acaaaaaata ctccgataag gatttaatag atgcttttta tcaactagat ataaaaagag
    36661 gcgatatttt atgtgtacat acagaacttt ttaaatttgg catacctttg ctttctagaa
    36721 atgaattttt acagactata ctcaattgtt tttttgaagt tataggcaaa gaaggcactt
    36781 tgatcatgcc aacctttact tatagttttt gcaaaaatga aacttatgac aaaataaatt
    36841 ccaaaacaaa aatgggagca ttaaatgaat attttcgcaa acaaacagga gtaaaacgca
    36901 caaacgatcc tatattttct tttgctataa aaggagcaaa agaagaatta tttttaaaag
    36961 atacaacaag ttgttttggg gaaaattgtg tttatgaggt tttaaccaaa gagaatggaa
    37021 aatatatgac atttggaggc caaggacaca cactaacaca ttatgcagaa gaacaattta
    37081 atgtatttta cagatatcat aaaattttct ctggaatttt aattgatgaa aacaatatat
    37141 catacaataa aaccattagt tattatgtta gaaaacttga catatcttct gaacccaatt
    37201 taattaacat tatcaatatt gttaataata ctaaaaattt taaaaaaaac aattttgcag
    37261 gagatcatat aaatatttac aacgctaaag aatatataga aattttatgg aaaaaattag
    37321 atataaacca aacaattcta atagaaaatt atgatacaat atattaattt tcaacattct
    37381 caagaaagtg gtatacaatg gaaaaacaat tttatgaaat tttagaaaat atacttgaaa
    37441 ccaaagtaga tgaaaataca aatttaagca tggaaaactg caagaactgg acttctttag
    37501 ctcatattga tatcatcatg agtttagaag aagaatttga aatcaaattt aacaaagaag
    37561 atttaagtct cttaaaatct caaagcgctt tactagaaaa aattcaaacc ctaaaggcag
    37621 aaaaatgaaa gaaaatattg aaaaattatt tcaagccatc gctcaaaaaa atcctatcca
    37681 ttctaaatat cttaaaaaaa ttgaattttc acaagaagac gaagaagaat ttgataaatt
    37741 aatttcttat tatattcaag atggtatcag tataaaagaa caatgcgatt gttatttatt
    37801 gatccttaac gatactttag aagaaacaaa atttttcata gaaaatgggg cttatcgtta
    37861 ttctagcttt gatgaagtta aggataaagt ttattttaat gaaagctata tgaaacaata
    37921 catgataggc ttagctcttt cttcttttgt ttggatagct catattaaag tgagaaagta
    37981 tttttcacaa tatttaaaaa attttactcc aaaaacaact tattttgaaa taggccctgg
    38041 ccatggagaa tattttgcaa gagcagttaa aagtggtaaa ttttccgcct tttatggact
    38101 tgatatctct ccaacaagtt gcgaacttac tcaaaaaata gtaaaacaac aagtaggggg
    38161 attgattaca aaatgtgatt ttttatgtca agattttttt acttatgatt ttgataaaaa
    38221 agctgatttg atagtgattg gagaagtgct agaacacgta gaaaaacctc ttgaattcct
    38281 taaaagatct aaagagcttc ttagcgatgg aggggaaatt tttgcaacta ttcctatcaa
    38341 tgctcctgct attgatcata tttatttatt ttcccatcct gatgaagtta aagatttgat
    38401 agaaaaatca ggcttaaaat ttaaagctta tgaatgtttt atggcaaatg attatagttt
    38461 agaaaaagca ttgaaattta aaaatgctat cactatggca gtagttttaa atgcttaata
    38521 aaacactcaa tttacccctt catcatatag gcgtggcttg taaaaattta gaaaaagaaa
    38581 gggaatgttt ttttaaacta ggtttttata aagaatcaga atttatagat gaaaaacaag
    38641 gggtaagagg cgaatttatc attccttgta atgaagcatt tccacagtat agatttgaac
    38701 ttttgcaaaa tttaaacgat aaaggaccac tagatagcta tttgaaaaat aataccaaaa
    38761 tgtatcattt agcctatgaa agtaaaaata tcgcccaaga tttaattctt ttggaacaac
    38821 aaggaggcat ttgtattgtt cctattatgc aagcaagcta ttttgctaaa ctttgtttta
    38881 tcatgatgcc aaataggctt ttaatcgaac ttgtggagct aaaatgaatc ttttttcacc
    38941 tcatttaaaa cgcaatgagc ttataaaatt tgccaaagaa ttagacttta gtaaaagtca
    39001 agatcttctt attaatgtcc atagaaatca tgcttttgaa ggagtgcaaa gtatcattgc
    39061 tcctttttta cattttgcta atttaagagc tgagtttaat ttcagctctt atgatgatag
    39121 cttgagtttt gataacttta aagaagctag tttagaactt ttatggctag atttaacccg
    39181 ctataaaaat aatgtgcaaa attttataga agaaagactt ttagaactaa gaaaaatttc
    39241 acaaaaccct attttagttc ttagtttagg agaatttaaa acagataaaa aaattttaaa
    39301 ttgtgaaatt tttaacatag aaaaactcat aaaagagtat tttgatgaag aagatatttt
    39361 agacttagct aaagaagaac ttacaggctc taagcttaat aataaagcct tgattttctt
    39421 ggcacaaatt ttaggactta gtctcatccc tgcacttgta aaacccgctc ttaaagctct
    39481 tgtacttgat cttgataata ccttgtatca aggaatttta ggtgaagagg gtatagataa
    39541 tcttaattta agtcctttgc acaaaacctt acaagaaaaa attaaaactt ttaaaaaaca
    39601 agggttttta cttgccctag cttcaaaaaa tgaagaaaaa gacgcaaaaa aactttttga
    39661 aataaggaaa gatttcatct tacaatggga tgattttgat gctagaatga tcaattggga
    39721 gccaaaaggt gaaaatatct taaaaattgc taaaaaattt aatataaata ctaacgctat
    39781 gctttttata gatgataata tcgccgagct tgaaaatacc aaatttacag gcgttaaaac
    39841 acttttatgc gatgaaaata tactttataa aatcaaactt tttcctaatc ttttaaaact
    39901 ttcaaatacc aaagaagatc aaattcgtgc caaagatata gcagccaatg ctttaagaga
    39961 agagcttaaa agcttaagcg atgaagaata ttttcaaaat cttgaaatca gcttaaattt
    40021 tagcaaaaat gatctgcaaa atatccctcg cattagcgaa cttttaggca aaaccaatca
    40081 atttatcgct aattacacac gcttaaatca agaaaaagtc gcacaacaca tgcaaaaaga
    40141 actcattgta agtgtgagta tgagtgataa attaagcgat agtgggatta tcgctatttt
    40201 tgttttttct tgcaaagaag gaaatttatt tatcgatgat ctttgcattt cttgtagggc
    40261 tttaggtaga aaacttgaaa ctagaatgtt ttttaaagcc tttgagctag ctttacattt
    40321 ctttgatctt aaaaacaata atgcaaggct ttactatcaa aaaggcgaaa gaaatatgcc
    40381 atttttaagc tttttagaac aaacttctaa agaaattgaa aaaaactcag cccttgtttc
    40441 atttcaaaat ttaaacttta aaggacttat aatccatgaa aactagattt gataaagcca
    40501 aaatttcagg catttgcgta agcgtacctg aacataaaat ttgcattgat gatgagttag
    40561 aaagcgtttt ttcaaatgat attaaaaccc ttaaaagaat gaaaaaagtc ataggcttaa
    40621 aaacacgtta tatttgtgat gaaaacactt gtgtaagcga tcttggcaaa cacgcagcca
    40681 atacactttt acaaggttta aatatagata aaaatagcct tgacgcactc atcgtagtaa
    40741 ctcaaagtcc tgattttttc atgccttcta cggcttgtta tttacatcag cttttaaatt
    40801 taagctccaa aaccatagct tttgatttag ggcaagcttg tgcagggtat ttatacggct
    40861 tatttgtcgc tcattcttta atacaaagtg gcttaggtaa aattttgctc gtttgtgggg
    40921 atactttaag caaattcatc catcctaaaa atatgaattt agcccctatt tttggcgatg
    40981 gagtaagtgc aactttaatt gaaaaaacgg attttaatga agcttttttt gagcttggaa
    41041 gcgatggaag acattttgat aaactcatca ttccaaaagg tgcgatgaga atacctaaag
    41101 cagatatttt taacaatgat tcgctcatgc aaactgagga gtttagacaa ttagagaacc
    41161 tttacatgga cggaacaaat atttttaata tggctttaga atgcgaacct aaaagcttta
    41221 aagaaatttt agaattttcc aaggtagaag aaaaagacat tgcttttcat ctttttcatc
    41281 aatctaatgc gtatttggtt gattgcatca aagaagaatt aaaacttaat gatgataaag
    41341 ttcctaattt catcatggaa aaatacgcta atttaagcgc ttgttcacta cctgccctac
    41401 tttgcgaact agatactcca aaagaattta aagcgagttt aagtgctttt ggtgcagggc
    41461 ttagctgggg aagtgcggtg ctaaatttca aagatttata cacaaaagat attttaattt
    41521 acacaaagga gaaataatga caaaaactga atttttagaa gagcttaaag aagctatgca
    41581 tagagatgag aacttaagcg aggatatgct acttgatgat atagatgagt gggatagctt
    41641 ggcttttgta tctgtgatgg tgctttataa aaatcttttt gctttaaaaa tcacagccga
    41701 ggacttgaaa aattgtcaaa aagtaagtga tttaatcaat ttagcaaagc ttgattaaaa
    41761 cctttaaggt tttaatcttt tatctctaat tcaaatttat ctcccacatc tttaaacata
    41821 aacactttat tcccacaagg ataagagatg gaattttctt gcattaaaga ttttcttttt
    41881 tgtaattttt caagcattaa aggaagttct tttctaaata aggctttatc aggtatacca
    41941 caaccatgat ctaaattttt aataaatttt ccatcaattt tattttcatc tatcaaattt
    42001 aagcttacat catatcctaa aatttttaat atttgcatgg tttgttgttt aaaattggca
    42061 ggcgttagag gatctttatc gctatgataa cttacataaa tgatattttt atttttttga
    42121 ctttgcaaaa tcaaatgatc cttatttaac aatgttctaa taaaataatt ttcattatta
    42181 aaaaaataag gtgaattttc tttacgcgtc cagtgggttt ttagaaaaca ttgtattaaa
    42241 atatgcgaac tatttaaaac ataatcacaa ccactctcca tttctcttcc taaaatataa
    42301 tttaaaggtg gcaaagccga acccgaatta tcaatcacac catccacata ccaaggagct
    42361 atctttgcta taagcaaggc taagtatcct ccataagacc cccccccata aatttttggt
    42421 aaatctgcaa gttttggaaa gcgtttaact agatctttta aagcattgat atgatcaata
    42481 gctgccataa tgccaaaatt ttgatattct ccattaggtg ggataaaagt tgaagtaaat
    42541 ttcgcttgat aattttgcgc tagttttctt tgtgatttta aagtagtaat ataatgatct
    42601 aaatgatgat aatattctaa agcattatta gaatttaaat ttctactatc aatgttaaaa
    42661 tcattcaata ctttagaaaa attttccaga tcttcttcta aaaattttgc acttgcatcg
    42721 tattttaaaa catctgaacg cctttggcaa aaacaatgat aaaaaacatt tattgtcact
    42781 acatcaaaat ttttagcaat ataatttcta taagaatcta aaaaatatat atttgcatta
    42841 gctccataac ctcctatgac aaaaactata gctttgagat ctttttcatc atcataactt
    42901 atgcgatatt caagcttact ggttctttta atacctagtt ctacatcatc acaagaatcg
    42961 atttcaaagg tttggtttat gagcatatat tttccttttt aattaatgat caattttaac
    43021 tgattttcta catctttaaa agtaaacact ttatttccac aaggataaga gatggaattt
    43081 tcttgcatga aagattttct tccttgtagt ttttcaagca ttaaaggaag ttcttttcta
    43141 aataaggctt tatcagtaat cctcatacca tgatttaaat cttttataaa tcttccatca
    43201 atctcacttt cgtcttttat taaatgtaaa gtggcgtcat atcctagctc tttatacgct
    43261 aaaaaaagag tttgtttatc ttttgctgta ttaaatggat cttttaaact atgataagat
    43321 actaaaataa tatttttatt gacactagct tgtatagtta aatgggaaga atttaacaaa
    43381 gaacgaatca tataattttc attagtaaaa aaataagata atctttcatc ttctctagtc
    43441 cagtacgttt taataaacat gcctaccaat ttatttaaat cactaaaaaa aaattcgggt
    43501 ctacttaaat cttttcctat tatacattcc aataatggca aaacagttcc tgaattatca
    43561 atcccgccat ccacatacca aggagctatc tttgctatga gcaaggctaa gtatcctcca
    43621 taagaccccc cccataaatt tttggtaaat ctgcaaattt tggaaagcgt ttaactaaat
    43681 cttttaaagc attgatatga tcaatagctg ccataatgcc atagttttga taatctccat
    43741 taggtgggat aaaagttgaa gtaaatttcg cttgataatt ttgcgctaat tttccttgtg
    43801 attttaaagt aataatatgc tgaataagca attcataata cttggtagaa tttttacaat
    43861 caagattctg tggattaatg ccaaaatcta acaaaatctt agatagactt aacaaatcct
    43921 cctccatgaa gctaatagaa gcactatact ttttattatt tgatattctt gcacaaaaac
    43981 aatgataaaa aacatgtacc actacaacat caaaattttt agcaatatat tccctatcaa
    44041 aatctaaaaa agaaatattt gcattagctc cataacctcc tatgacaaaa actatggctt
    44101 tgatatcttt ttcatcatca tagctaatgc ggtattcaag tttgctagtt ctttttatat
    44161 ttaattctac atcatcacaa gaatcaattt caaaggtttg gtttataagc aattttaagc
    44221 cttttattgt attttaaaga caattatact taaattttag taaaataaaa cacaaaaaca
    44281 aggcttaact atgaaaaatc tttgcataat ccctgctcgt ggtggatcaa aaagaattcc
    44341 tagaaaaaat atcattgatt ttctaggtaa acctttaatc tcttatagca tagaaaatgc
    44401 tttaaattca ggcatttttg atgaagtagt gctttcaagc gatgatgaag aaatcataga
    44461 agtagcctta aaatacggtg caaaagctcc atttgtgcgt gataaaaatt taagcgatga
    44521 ttatgcttca agcactgctg cagtgcaaaa tgccatagaa attttacaaa gccaaaatca
    44581 aatttatgat catgtctgtt gtctttatgc tactgctccg cttttaaata aaaacatttt
    44641 aaaacaagct tatgaaaaat ttatacaaaa tgaaagcaag tttttatttg ccgccactga
    44701 gtttgagtat cctatacaaa gggcttttta tctaaatgag aataatcaag tttatatgtt
    44761 tgatgaaaaa cattataaaa gtcgttcaca agacttaaca aaagcttatc acgatgcagg
    44821 agctttttat tttggcacaa gtaaagcttg gcttgaagaa gattttatgt ttaaacctca
    44881 ttctagtgta tttgtattgc caagaaattt agtttacgat atagatacca tgcaagattt
    44941 agaatttgca aaaatacttt ataaggcaaa tcatgaaagt gctttttaga agcgatagct
    45001 ccagtcaaat aggctttgga cacattaaac gcgatctagt cttagctaaa caatatagcg
    45061 atgtaagttt tgcttgtttg cctttagaag gctctttgat cgatgaaatt ccttatcctg
    45121 tttatgagct tgatagtgaa agcatttacg aacttatcaa tctcatcaaa gaagaaaaat
    45181 ttgaacttct tatcattgat cactatggca tcagcgtaga tgatgaaaaa ctgatcaagc
    45241 ttgaaacagg ggtgaaaatt ctaagctttg atgatgaaat aaagcctcat cattgtgata
    45301 ttttactcaa tgtcaatgcc tatgcaaaag caagtgatta tgaaggttta gtgcctttta
    45361 aatgcgaagt aagatgtggt ttttcttatg ctttaatcag ggaagaattt tatcaagagg
    45421 ccaaagaaaa tagagaaaaa aaatatgatt ttttcatttg catgggtgga actgatataa
    45481 aaaacctttc tttacaaatt gctagcgaat tacctaaaac aaaaatcatc agcattgtaa
    45541 ccagctcttc taatcctaat cttaaaaaat tgcaaaaatt tgcaaaatta cataacaata
    45601 ttagattatt tatcgatcat gaaaatattg caaaattgat gaatgaaagc aataaactca
    45661 tcattagtgc aagttcttta gtcaatgaag ccttgctttt aaaggcaaat ttcaaagcta
    45721 tttgttatgt taaaaatcaa gaatctacag caacttggct tgctaaaaaa gggtatgaag
    45781 tggagtataa gtattgataa aacttaaaaa tttcacagaa cttaattctc aagaaataga
    45841 gctgattttt aaatggcgca atcaccccga tatcaatcaa tttatgaaaa caaaatatat
    45901 tgattttgaa gaacatttaa gatttttaaa aaaattacat caagattcta gcaaaaaata
    45961 ttttttagtt tttcaagatg aacagattat cggcgtaatt gattttgtca atatcacaac
    46021 taaatcttgc gaatttggac tttacgcaaa acctaattta aaaggcgtag gacaaatttt
    46081 aatgaatgaa attataagat acgcttttga aaacttaaaa gtaaatactc ttaaagctta
    46141 tgttttcaaa gacaatcgca aagctttaaa attatatcaa caaaatcatt ttactattta
    46201 tgatgaagat aaagattttt accatatttg cctaaagcaa tctgactgca aagccttgcc
    46261 tagctaattc ttcttttaca tctttagggg tatacttaga aaaatgaaaa atataagcac
    46321 ccgctaaagc atcagcaccc aaatttaaag ccttaactcc atcacttgga ttgctaagtc
    46381 ctccattgat aataagagga attttaagtt tattttgaaa gatctttaaa agttctaaat
    46441 cataaccctt tgcttttcct tcaaaatcca cagaggttaa aagaagctct ccagctcctt
    46501 ttttttcata ttctaaagca agttctaaag gacttttttc aagtaaattt cccctgtcat
    46561 aaacacaaaa ttgccctcct tttcttttaa catctataga acaaactata cattgagaac
    46621 caaaacgatt agccgcttta cttataaaat ccatatcttc taaggcctta gaattgatag
    46681 aaattttatc cgcacctaaa tttaaaatct tttgtatatc tttaagggtt tttatcccgc
    46741 cacctatagt taaaggcata aaacattctt tagcaagatc ttctatactt tcaaaatcta
    46801 tttctccact ttttgaagca tctatatcta agataataag ctcatcaaca ttgcgtgcat
    46861 tataaattct cattgttgaa gttaaatgcc ctatagtgcg aaaatcttta aattctatac
    46921 ttttaacaag ttgtccgttt tttaacaaaa cacaagggat aattctagtt tttaacattt
    46981 aaagccttat aaaattttct aaaagtttta agcctaaatt ttgacttttt tcggggtgaa
    47041 attgtgtagc aaaaatatga tctttttgta aagatgcaac aaatttatgt ccgtattgtg
    47101 ctttagcact tacaaactca tctttgcatt tcacataaaa agaatgcaca aaataaaaat
    47161 cactcttatt atctatgcct tgatacaaag gaacttgttt taaaatttca agctcattcc
    47221 aacccatatg tgggattttt aaatttaaat cctcttcaaa tttgactact tcaccttcta
    47281 taaaaccaag tccttcgcaa actccacctt catagcccct ttctaaaaaa agctgcattc
    47341 ccaaacaaat gcctaaaata ggtttttttt gtactaaaac ttgctctttt aaagcttcta
    47401 taaaaccaaa ttcttttaaa tttttcatcg cttctttaaa agatcccact ccaggtaaaa
    47461 gcaatttatc tgctttttgc aaatcttttg gatttttagc tatgaaattt atagctccta
    47521 ttttttcaaa agccttagca acagagttta aatttcccgc cttgtaatca atgagcgcta
    47581 tcattttaaa acacactcgt cttttcttac caaagaacca tcataatctc ttataaattt
    47641 accattttca tcacgtttaa aaattttttt attggtaaaa gaatctacta ttttttgaaa
    47701 ttcttcctcg ctaaaaccac tgaattcaag gtatttttta atagcctttt tagggggctt
    47761 gccatcgtat ttttgtacca aacgcacccc ttcttcacgg ctgatataac ctaaacgaat
    47821 atccaaacaa gcattatccg ttgctctacc aaagccgtat ttgcagtatt ttaaataatc
    47881 atgcacatga ttagaataac aatctaaatt ttcaaaattt tcataagtag tctcaacagg
    47941 atgatctaga gttaaaaaac catatttttt agaaatttca agaatttttt tataatccca
    48001 tttaaaataa taccctaaaa atagcccagt aacccctact ctttgaagtt cttcatcact
    48061 tggataagta tataaaaaca aatctttttc agtgatacca tttaccccaa gcatatcaga
    48121 agcacgattt cctaaaagcc cgccaaattc ttcaagccac tctctgccta aaatattttt
    48181 atttttacta ctcgcaggac cgccatactc tatctgcgga ctttctcccc agatgatcaa
    48241 aggcactcca aaatttaccg ctatgcgtgg aacagaagta aaaattccca aatggttttg
    48301 ccactcatta tcccctgttc ttataaaagc ttcacgggca agtttttgat aaacttttgg
    48361 atcacgcttg atatggatca aatccacgcc aagatgattt aaattgtcta aatttttgcg
    48421 ccctattttc gtaggtacgc taggctcaaa acacacacac aaaggattaa gtccaagttc
    48481 gagcatttta accacttgaa aagtagaatc ttttccgcca cttactccga taacacaatc
    48541 ataaacagga tgttttttgt atttttttat aagctcaaaa aattcttttt ctctttcttg
    48601 ccaattaata ttttgatttt tagcttcttg agaacgacaa gcatcacaaa caccttcttc
    48661 atcaaaatgt aaatcaggct tagtatctgg catcacacat tttttacaaa atttcataaa
    48721 tttcctttaa ttagtcttaa atatata
//
LOCUS       DAPIWB010000004        44303 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.004, whole genome shotgun sequence.
ACCESSION   DAPIWB010000004 DAPIWB010000000
VERSION     DAPIWB010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 44303)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 44303)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..44303
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.004"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            133..1539
                     /gene="aspA"
                     /locus_tag="RJ266_000159"
     CDS             133..1539
                     /gene="aspA"
                     /locus_tag="RJ266_000159"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HDV7353944.1"
                     /translation="MGTRKEHDFIGELEISDEVYYGVQTFRAVENFDISHDRLKDFPR
                     FVRALARVKKAAAMANHELGLLDKNIQDAIIKACDKILEGGYYDQFVVDMIQGGAGTS
                     TNMNANEVIANIGLELMGHKKGEYQYLHPNDHVNLSQSTNDAYPTALHLALHDYLSDL
                     AKAMEHLKKAYERKAEEFKDVLKMGRTQLQDAVPMTLGREFKTFAVMIGEDIQRVLEA
                     RKLILEINLGGTAIGTGINSHPDYPKVVERKIREVTGFEYTVAEDLIEATQDTGAYVQ
                     ISGVLKRVATKLSKVCNDLRLLSSGPKCGLNEINLPKMQPGSSIMPGKVNPVIPEVVN
                     QVCYFVIGADVTVTFACEGGQLQLNVFEPVAAYSLFNSIVMLEKAMYTLADKCIDGIT
                     ANEKICSDFVYNSVGIVTALNPYIGYENSASIAKEAMNTGKRVADIALERGLLSKEQI
                     DEILTPSNMLNPHMEAKK"
     gene            1556..2893
                     /locus_tag="RJ266_000160"
     CDS             1556..2893
                     /locus_tag="RJ266_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDV7353945.1"
                     /translation="MDIMIILQVIVLLGAIFIGIRLGGIAIGYAGGLGVVILGLVLGM
                     KPGNIPWDVILIIAAAIAAISAMQQAGGLDYMVRVTEKILRSSPKFINYLAPACGWLL
                     TILAGTGNAVFSLMPVVVDVAKSQNIKPSVPLSLMVVSSQIGITASPVSAAVVYMSGV
                     LEPLGWNYPTLIGIWISTTFIACMLTAFIVSLITPMDLSKDSVYQERLKAGLVKDAGA
                     ILHGEDKPGAKLSVGIFLITVLAVVLYATAISSNIKWIDPVVVPRDAAIMSFLLTAAT
                     LITWLCKVEPGKILDTSVFKSGMTACVCVFGVAWLGNTFVAGHEASIKEVAGDWVKQT
                     PAMLAVAFFFASMLLYSQAATAKAIVPVIITALGISAANPHDSYMLVACFAAVSALFV
                     LPTYPTLLGAVQMDDTGTTRIGKFIFNHSFFIPGVLAIAIAVALGFVLAPMLV"
     gene            3001..4362
                     /locus_tag="RJ266_000161"
     CDS             3001..4362
                     /locus_tag="RJ266_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COG3014 family protein"
                     /protein_id="HDV7353946.1"
                     /translation="MKIKVGLIFSGIVCLFLTACVNQVKQNTTFENALTQKYCGDDFF
                     NQNLEKIKKNDDVIYTGLNAGLIARNCGDFNKSNVFFDAAEESYKYDVDLENVGSKAA
                     KFVGTTLLNDTIVDYDGSLYERIMVNIYKALNYMEEDDYENARVEFNRALMRQDKAKE
                     YFAKEIEKNRADLDKAKEDKNYDKNMNENSKVIEAQYDNLFKEFDTTKNFINPYATYL
                     ASIFFFMDKDYRKATDLFREVAIIYPKNKTIKKEAKIFKEYATKIKVKKAKKYVFVVY
                     ENGFGVVKDEFALTLPFIVDKKIISTNIALQTLKKREASFANLNINGQNTNDFVDLDN
                     IVATEFKINMPAMIAKALAQTIIKTTLNVAVANNDSTGGWLSLATAVATAATNKADVR
                     SWRGLPKSIAMATIENDGNLEIKDPQGNILFQKSLDKNKNALVIVRSFAPYLPASVAI
                     MEK"
     gene            4372..4740
                     /locus_tag="RJ266_000162"
     CDS             4372..4740
                     /locus_tag="RJ266_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcfL family protein"
                     /protein_id="HDV7353947.1"
                     /translation="MKKIILFILMFLLSACAPSYQINSNQNTVILGSNLPKSLVKQFQ
                     KRINSNGYLEFEVILRSTFAKDVIYKVDWLDKDGFVLRDVLNEDYQALRIPAGQEVIL
                     RKLASDIRAKDFRLEIKAKN"
     gene            4764..5387
                     /gene="lpoB"
                     /locus_tag="RJ266_000163"
     CDS             4764..5387
                     /gene="lpoB"
                     /locus_tag="RJ266_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoB"
                     /protein_id="HDV7353948.1"
                     /translation="MKKTKILGTALIGALLFSGCAQTAYTDGKASQVKKGDALTLGLD
                     RQDFESAAETMINSMLSDPAFANIKPGTRKVIAIGRVVNDTPQRIDTEKLTAKITSAL
                     RKSGKFVLTSAVAAGGALDSMSEDVRELRDNDEFNQKTIAKKGTLVSPDFSLAGKIRQ
                     DNVKLSNGKTQVEYFFLLRLTDLTSGLVYWEDEQTIDKTGSSKTVTW"
     gene            5469..6806
                     /locus_tag="RJ266_000164"
     CDS             5469..6806
                     /locus_tag="RJ266_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7353949.1"
                     /translation="MKKILFIGSLVMASLLYAQGSQPVEITQQDINTQNEMSDASTKD
                     ITPKSIEDFFEEFADNFGIEYGITKDGKTFYTGKSTVAVNDTDPQFAQALQNAYQKAM
                     LNLQSEFIRDVFGRIATSRIQNYEADNSTNAKEFDELPKGDKVDQILNKLTQLAGAQL
                     DKALKDLGIDTNSLSEDRKKTLLKQEFLNKTMTNAIGSMSGLVPVQTIVTQRRGEYDV
                     GVIAVISNKTRQLAKDMALARQSAIKGKGKAISEYLPKDTKGFLNEYGIRLVYDENGA
                     PIILSYGNWGYVADPSNAKKTNILEDRAKETALTMADAAIIEFINTNLSLKDERTTGD
                     TYEEIIKQSINVNDSSTQEQTQNITNIIDKVNSKIKASASGKIRGIRTLKKWSYTSEN
                     GIEHVGAVRFYSYENLANTNEALNSKSNATKNEAKKSSSIQRSSNVVNSMDDF"
     gene            6816..8018
                     /locus_tag="RJ266_000165"
     CDS             6816..8018
                     /locus_tag="RJ266_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7353950.1"
                     /translation="MKIIKILFLGLFLSLSLNAKVVTTTSTKSSTGEGTGLTREDAIN
                     NAIIEAIGKMSGVSINSLKKSNTSVSTDNSGSNIQDNYSEQISKATKGRADTYEINSV
                     EQDANGKYTANVTIFKTTTTKKYQVPGLSADNRRSITVFDSTPDAAKRGIGSALQQKI
                     ISDLLQSRKFNVLDRDSSGYYEMEKALIKSGDAASDEVYKLKNMLATDYILLFSISGL
                     EGKQKTSNLTGKSKTEIEVIVDYRVLLFATRQIKFSNTLSMKVNLKDNSLSANETALK
                     QIANRIAGDILNAIYPLKVASVENNEVIFSQSLNQGDVYECFALGKVIKDTYTKENTG
                     RVESKTGSIEITRTSPKFSYAKITEGSVKVGDICRPLSNTGSGNGYTIGRDANYQTQE
                     GGGVNLGF"
     gene            8177..8485
                     /gene="rplU"
                     /locus_tag="RJ266_000166"
     CDS             8177..8485
                     /gene="rplU"
                     /locus_tag="RJ266_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HDV7353951.1"
                     /translation="MYAIIKHSGKQYKVSVGDELKLDHFEAESKASIEVSEVLAINDK
                     ELKVGAPFVAGAKVVLEVINHGKDKKVVIYKKRRRKDSKLKRGFRRQFTRVVVKDIKA
                     "
     gene            8496..8750
                     /gene="rpmA"
                     /locus_tag="RJ266_000167"
     CDS             8496..8750
                     /gene="rpmA"
                     /locus_tag="RJ266_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HDV7353952.1"
                     /translation="MAHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTA
                     THAGNNVGMGKDHTIFALIDGFVKFERKDKDRKKVSVYPA"
     gene            8856..9926
                     /gene="obgE"
                     /locus_tag="RJ266_000168"
     CDS             8856..9926
                     /gene="obgE"
                     /locus_tag="RJ266_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HDV7353953.1"
                     /translation="MFIDSVKITLASGDGGKGAVSFRREKHVPLGGPDGGDGGNGGDI
                     IFVCDNNTHTLVNFKGKRELRAQNGAGGMGRNKNGKKGENLELIVPEGTQVIDAQTNE
                     ILLDLTEEGQRELFLKGGKGGLGNTHFKHATNQRPDYAQPGIKGESRLVRLELKLIAD
                     VGLVGFPNVGKSTLISVVSNAKPEIANYEFTTLTPKLGLVDVNEYNSFVMADIPGIIE
                     GASGGKGLGLAFLKHIERTSFLLFVLDPMRQMPLKEQFIVLRKELEKFSNELFGRKFG
                     IMISKSDSVRLGEEFAEQIALNINELDNYLKEINNPQSFLIKVSSLEKTGLKELKFML
                     LEEIKTLRNNKKNFNNLGSVLY"
     gene            10014..10769
                     /gene="proB"
                     /locus_tag="RJ266_000169"
     CDS             10014..10769
                     /gene="proB"
                     /locus_tag="RJ266_000169"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HDV7353954.1"
                     /translation="MKRIVVKVGSHVISEENTLSFERLKNLVAFLAKLMEKYEVILVT
                     SAAISAGHTKLDIDRKNLINKQVLAAIGQPFLISVYNELLAKFNKLGGQILLTGKDFD
                     SRKATKHAKNAIDMMINLGILPIINENDATAIEEIVFGDNDSLSAYATHFFDADLLVI
                     LSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQATIKTGSEHGTGGIVTKLKAAKFLL
                     EHNKKMFLASGFDLSVAKTFLLEDKQISGTLFE"
     gene            10843..11760
                     /locus_tag="RJ266_000170"
     CDS             10843..11760
                     /locus_tag="RJ266_000170"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HDV7353955.1"
                     /translation="MKKIIFMGTPSYATCILKALVENENFKLVALFTQPDKAVGRKQI
                     LTPSDTKAFLSQNYPSIPIFTPSSLKDENIIREIKDLNPDFIVVAAYGKILPKAILDL
                     VPCVNLHASLLPKYRGASPIQSAILNKDEKSGVCTMLMEEGLDTGAILESLECDIKDK
                     NSSEVFELLANLAAKLILTTLLNFDKITPKKQEESLATLCRKIKKEDGLINLQNAREL
                     YQKYLAFTPWPGVFLENGLKFLELELVDELKQNARMGEILELEKESFLLACKQGVLRI
                     KKLQESGKKALDGRTYLNGKRLKSENSLC"
     gene            11723..12376
                     /locus_tag="RJ266_000171"
     CDS             11723..12376
                     /locus_tag="RJ266_000171"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HDV7353956.1"
                     /translation="MEKGLKVKIVCVESIDSTHLFLCEQIRNGKIDGNFAIYALEQTN
                     GVGSRENSWQSSKGNLHLSFCIKEEDLPKDLPLASVSIYFAYLLKELLQEKGSKIWLK
                     WPNDLYLDDKKAGGVISAKISNFIIGGMGLNLKFSPQNTALCDIEILLKDLVSEFLQK
                     VEKKILWKNIFSKYMLEFEKSRKFSVHHEGKVFSLENSFLYEDGSILLGDKRVYSLR"
     gene            12373..13158
                     /locus_tag="RJ266_000172"
     CDS             12373..13158
                     /locus_tag="RJ266_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004278029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HDV7353957.1"
                     /translation="MSEIITIANQKGGVGKTTTAVNLAASLAVAEKKVLLIDVDPQAN
                     ATTGLGFNRNNYEYNIYHVFIGRKKLSDIILKTELPQLHLAPSNIGLVGIEQELAKGE
                     NNEKKMLLKNQIQEVIDEYDFIIIDSPPALGSITINAFAASDSVIIPIQCEFYALEGV
                     AMVLNTIKIIKKTINSKLRVRGFLPTMYSSQNNLSKDVVDDLKQNFKKQLFTINGNED
                     DFIVIPRNVKLAESPSFGKPIILYDIKSPGSVAYQNLAYSILG"
     gene            13164..14000
                     /locus_tag="RJ266_000173"
     CDS             13164..14000
                     /locus_tag="RJ266_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HDV7353958.1"
                     /translation="MGLNKDRGLSSLISDMDTVYSKELGFDKNQSTMIEIDQISPNPF
                     QPRKNFDQEALDELANSIKEFGLIQPIIVFKKNNKFILIAGERRLRAVKALGKKEILA
                     FIADIDENKLRELALIENIQRENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQI
                     TNTLRLLNLDIRTQELIASGKISQGHAKVLVGLDQKDEKMLVDSIIGQKLNVRDTEKI
                     VKKIKNNESLPNQEFEDEIKKLKQILNRFGFDCKNKNNDFVIHLENIDKIKKLIKMLE
                     KF"
     gene            14061..14486
                     /locus_tag="RJ266_000174"
     CDS             14061..14486
                     /locus_tag="RJ266_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B'"
                     /protein_id="HDV7353959.1"
                     /translation="MFEDMHPSIMLATIAIFLAMIVILNSMLYKPLLKFMDERNDSIK
                     NDENKVKENSQEVLCVNDKLEVIHINTREEIQKIKQSAIAAAKEEAEQILRSKKEELE
                     RKMASFYADLAIQKKELQEHLNIHLPELKQALQNNIKKI"
     gene            14497..15009
                     /locus_tag="RJ266_000175"
     CDS             14497..15009
                     /locus_tag="RJ266_000175"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HDV7353960.1"
                     /translation="MSKLLFIIFLLPLYAFGASNGSGEYDIIPRTINFLIFVGILYYF
                     VATPFKNFYKNRIVKISSKLDEIQKKLLESKAKKLDTMKKLEEAKASAAAALITAKKE
                     AEILVENIKKETQDELDLLQKHFEEQKDYEFRKMEKELVSNILNEIFSDPNMTLKQSE
                     IIELMMKKVS"
     gene            15012..15533
                     /locus_tag="RJ266_000176"
     CDS             15012..15533
                     /locus_tag="RJ266_000176"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HDV7353961.1"
                     /translation="MENIIARRYAKAIASRADINDFYQNLCILNSAFVLPKFKNIIES
                     NEIKKERKMEFLDSFFDIKNSSFQNFLRLLIENSRLECIPQIVKELERQKAFKENIFV
                     GIVYSKEKLSQENLKDLEVKLNKKFDANIKLNNKISQDDSVKIELEELGYELSFSMKA
                     LQNKLNEYILKII"
     gene            15547..17052
                     /gene="atpA"
                     /locus_tag="RJ266_000177"
     CDS             15547..17052
                     /gene="atpA"
                     /locus_tag="RJ266_000177"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HDV7353962.1"
                     /translation="MKFKADEISSIIKERIENFDLNLEIEETGKIISVADGVAKVYGL
                     KNIMAGEMVEFENGDKGMALNLEESSVGIVILGKGEGLKEGASVKRLKKLLKVPVGEA
                     LIGRVVNALGEPIDAKGVINANEYRFVEEKAKGIMARKSVHEPLHTGIKAIDALVPIG
                     RGQRELIIGDRQTGKTTVAVDTIISQRGQGVICIYVAIGQKQSTVAQVVKRLEEHGAM
                     EYTIVVNAGASDPAALQYLAPYTGVTMGEFFRDNAKHALIVYDDLSKHAVAYREMSLI
                     LRRPPGREAYPGDVFYLHSRLLERASKLNDELGAGSLTALPIIETQAGDVSAYIPTNV
                     ISITDGQIFLETDLFNSGIRPAINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYREL
                     QAFAQFASDLDEASRKQLERGQRMVELLKQPPYSPLSVEKQVVLIFAGTKGFLDDIAV
                     SRIKEFEDGIYPFIEAKHPDIFEQIRSKKALDSDLEEKLAKAINEFKANHL"
     gene            17061..17945
                     /locus_tag="RJ266_000178"
     CDS             17061..17945
                     /locus_tag="RJ266_000178"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HDV7353963.1"
                     /translation="MSNLKEIKRKIKSVHNTQKTTNAMKLVSTAKLKKAEEAAKRSKI
                     YAQKIDEILSEISFQINKIVHNEDDVRLSLFHKKEQIKTVDLIFITADKGLCGGFNIK
                     TLKTVSEMLKEYEAKNINIRLRAIGKTGIEYFNFQKIELLEKYFHLSSSPDYEKACEV
                     IHAAVDDFLNGNTDEVILVHNGYKNMITQELKINHLIPVEPKSIEQTHNSLLELEPEE
                     TELLEDLMKTYFEYNMYYALIDSLAAEHSARMQAMDNATNNAKARVKQLNLAYNKARQ
                     ESITTELIEIISGVESMK"
     gene            17971..19368
                     /gene="atpD"
                     /locus_tag="RJ266_000179"
     CDS             17971..19368
                     /gene="atpD"
                     /locus_tag="RJ266_000179"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HDV7353964.1"
                     /translation="MQGFISQVLGPVVDVDFNDYLPQINEAIVVNFESEGKKHKLVLE
                     VAAHLGDNRVRTIAMDMTDGLVRGLKAEALGAPISVPVGEKVLGRIFNVTGDLIDEGE
                     EISFDKKWAIHRDPPAFEDQSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTV
                     IIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGA
                     RNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLA
                     SEMGKFQERITSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGI
                     YPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILGMDELSEEDKL
                     VVERARKIEKFLSQPFFVAEVFTGSPGKYISLEDTIAGFKGILEGKYDHLPENAFYMV
                     GNIDEAIAKADKLKG"
     gene            19372..19761
                     /locus_tag="RJ266_000180"
     CDS             19372..19761
                     /locus_tag="RJ266_000180"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HDV7353965.1"
                     /translation="MNDLINFEIVTPLGVIYQGEVKSVTLPGSEGEFGVLKGHAALVS
                     SLKSGVIDIEKADLNHELIAIDAGHAKVDEDKICVLAKGAVWVCGSDESEIEKNLAQA
                     KDLIKSMSSDNAALAATFSKLDNVRMH"
     gene            19761..20315
                     /locus_tag="RJ266_000181"
     CDS             19761..20315
                     /locus_tag="RJ266_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HDV7353966.1"
                     /translation="MNFEAIFYFFNSSSIITYIVLLWLSLYFILAFSILFARLTYLAT
                     WRNKEKESLENLLLGEKDLSRTDSILRKCNDTTSNHLEIYKNLASRRASAGLTWLSII
                     ASTSPFIGLFGTVISILETFGGLGTQNSLSIIAPKISEALVATGCGILVAIPAYTFHL
                     IIKRKAFELLSIIDSEIKVISSSK"
     gene            20324..20713
                     /locus_tag="RJ266_000182"
     CDS             20324..20713
                     /locus_tag="RJ266_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HDV7353967.1"
                     /translation="MPFDDEKPELNITPLVDIMLVLLAILMVTAPSITYEEKINLPQG
                     SQKNTSAPTVKSLIISINAKKEIFLNQEKYDFISFADNIAQRKAQFNTEDPVFIRADK
                     SLKYDDVISVLRSVKNLGFNKVALQTE"
     gene            20716..21495
                     /locus_tag="RJ266_000183"
     CDS             20716..21495
                     /locus_tag="RJ266_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB C-terminal domain-containing protein"
                     /protein_id="HDV7353968.1"
                     /translation="MKNYGLSNLNSFLLALAIYISIVILVFFRLVSEVEPAIQYTDIK
                     DSFVDIELAEPSKQVITQSNTPKEIQKPTEQVDIEKLFAQTTNKTVKTEDIDQKASNF
                     NELFGNIKEIQEEKTTKIQSSAKSGASSAPKPQASELVKQLNDSLLQEESSTQGESTK
                     AQKIGIYDEFLGKVVRIITQRWTQYYPNSEKISVKVKIFIDENGKFGYTSVEKSGNPL
                     YDAKVAEFLESQKGKFITYPPQNKNISITMNLRDEAKVKND"
     gene            21505..22713
                     /gene="tolB"
                     /locus_tag="RJ266_000184"
     CDS             21505..22713
                     /gene="tolB"
                     /locus_tag="RJ266_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HDV7353969.1"
                     /translation="MKKIVAIFLVFLGSLWAEDPVIDVVNSGVVLPKIIVKDNSNLSD
                     ENLKKSFYNIIVNDLKVSSNFEVVANATETSNYTFEYALNKNGNTLSLNVKIKAGGSD
                     KSEQTYTLNGLEQYPFLAHKSVKASVNALGLAPVDWMDHKILIARNSSSKKSQIIMAD
                     YTLTYQKVIVDGGLNLFPKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKILSSGG
                     MVVASDVNVDGSKLLVTMAPKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSK
                     VVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNNSAVSTYKDFLVYSSREPNQAGVFNI
                     YLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNANKTFYFPL
                     RVGKIQSIDW"
     gene            22790..23287
                     /gene="pal"
                     /locus_tag="RJ266_000185"
     CDS             22790..23287
                     /gene="pal"
                     /locus_tag="RJ266_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HDV7353970.1"
                     /translation="MKKILFTSIAALAVVISGCSTKSTSVSGDSSVDSNRGSGGSDGW
                     DIDSKISQLNDTLNKVYFDFDKFNIRPDMQNVVSTNANIFNTEVSGVSITVEGNCDEW
                     GTDEYNQALGLKRAKAVKEALIAKGVNADRIAVKSYGETNPVCTEKTKACDAQNRRAE
                     FKLSR"
     gene            23291..24238
                     /locus_tag="RJ266_000186"
     CDS             23291..24238
                     /locus_tag="RJ266_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDV7353971.1"
                     /translation="MKKIFTVALLGATLLYAESSAFGAGDITSNSSYGLTSNEKLFKE
                     KLDNLNNENIQTNARINEINERIEGLQSTLEGINSQYAKSNSRLSQVEENNQNIENNF
                     TSEIQKLKAYVEESRKIQEANNKQVKKVLAELSSLVDAINANYVSKNELNDANLSVKT
                     ITPSVVVSTTDSNSTIENNNTQNTQDDKAKQIDESWKKKKNNEILELAIKDVDKNAFE
                     DSKAKLNFLITKQYKPARANFWLGEIEYKQKNYNNAIVYYKKSSSLSTKGDYFPKLLY
                     HTAISLDKTGDTKTANGFYKALKTNYPNSPEAKASPNRK"
     gene            24252..24821
                     /locus_tag="RJ266_000187"
     CDS             24252..24821
                     /locus_tag="RJ266_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDV7353972.1"
                     /translation="MAIEKNSVVSMFYELKDANTNEVLESNLYSQPISFILGKGQILE
                     SLEEEVMKLDCPSNADVVIKKEKGLGEYDENAVQTLPKEQFAGIDLKVGMELFGEGEN
                     GETVRVTVKEIGENDVTIDYNHPYAGRDLLFSLNIVDARAASEDEILTGIIAGSHSCG
                     CGSGHGQDHHHGHGHGGGGCCGGGGCGCH"
     gene            24821..25741
                     /gene="fabD"
                     /locus_tag="RJ266_000188"
     CDS             24821..25741
                     /gene="fabD"
                     /locus_tag="RJ266_000188"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HDV7353973.1"
                     /translation="MKTAFIFPGQGSQSLGMGKDFYENSIKAKELLQNASDFCKIDFK
                     HLLFEENEKLNQSEFTQPAIVLNSLMAYSVLLEKKPDLSSKFALGHSLGEFSALAVNG
                     AFDFLEALSLVNKRGLFMQEDCAKVEAGMMVVLGLDDEKVEELCQKAQKENKQIFAAN
                     YNCDGQIVVAGLKPDLASYESVFKEAGAKRAMLLNMSVASHCPLLENASAKLCVELEK
                     VLKPNFKAVLSNANAKIYTCKEEALELLKAQLISPVLYKQSIKACENEVDYFIEFGAS
                     VLKGLNKKITSKETYALTNMNDIDEFLKVV"
     gene            25738..26427
                     /gene="pfs"
                     /locus_tag="RJ266_000189"
     CDS             25738..26427
                     /gene="pfs"
                     /locus_tag="RJ266_000189"
                     /EC_number="3.2.2.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxyfutalosine nucleosidase"
                     /protein_id="HDV7353974.1"
                     /translation="MMKIAILGAMSEEITPLLETLKDYTKIEHANNTYYFAKYKNHEL
                     VLAYSKIGKVNSTLSASVMIEKFGAQALLFTGVAGAFNPELEIGDLLYATKLAQYDLD
                     ITAFGHPLGFVPGNEIFIKTDEKLNNLALEVAKELNIKLRAGIIATGDEFICDEAKKA
                     KIREIFNADACEMEGASVALVCDALKVPCFILRAMSDKAGEKAEFDFDEFVINSAKIS
                     ANFVLKMCEKL"
     gene            26424..27185
                     /locus_tag="RJ266_000190"
     CDS             26424..27185
                     /locus_tag="RJ266_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002842688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HDV7353975.1"
                     /translation="MINLSKKLIRQVAQANAKFGLIKDGDRVLLGLSGGKDSLALAHL
                     LNRMQAHAPFKFELEAVTLSYGMGEDYSHLHAHCEEHGIKHSVLDSNIYEVSGDTIRE
                     NSSFCSYFSRMRRGALYTYALEKGFNKLAIAHHLDDAAESFFMNFIHNGALRTLAPIY
                     QSKRGITVIRPLIFVRERQLRDNATQNELSVIGNEFCPGMKLSEKNVKFPHAREEAKQ
                     LLANLEKDHPKFFTSLKTAFANLHTESFWLERTKI"
     gene            27182..27703
                     /locus_tag="RJ266_000191"
     CDS             27182..27703
                     /locus_tag="RJ266_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase family protein"
                     /protein_id="HDV7353976.1"
                     /translation="MKKAFVLVDYQNDFIDGSLGFDKALKIKENILKALNQIDFNNTH
                     LLLTYDTHDEHYLQSKEGLNLPVKHCIKESLGWQMPKEFEPFLQKAHKIFYKNTFGSL
                     ELANFIQKSDYEELHFAGLVSHICVFCNIILAFGANPNARIILHQNLSASFDENLEKS
                     AFDILRAYGIEIV"
     gene            27703..28317
                     /gene="recO"
                     /locus_tag="RJ266_000192"
     CDS             27703..28317
                     /gene="recO"
                     /locus_tag="RJ266_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecO"
                     /protein_id="HDV7353977.1"
                     /translation="MQGFILHTQKVKDEDLIVYILSPKMLIKAYRFYGLRHSSILSGY
                     KIDFALEENPSFLPRLKDVLHLGFLWIMQRDKMLIWQEFIRLLYRHLKDVEELDSFYF
                     DLLQECVKRFEKQNPKRVIVDAYLKILEFEGRLHKDFFCFACDEKIQNSITLLRAFLP
                     SHSQCALGFEFEEKKLKQFYSSKNCAIFDDEEIENLYHLIKEGL"
     gene            28314..28721
                     /gene="ybeY"
                     /locus_tag="RJ266_000193"
     CDS             28314..28721
                     /gene="ybeY"
                     /locus_tag="RJ266_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HDV7353978.1"
                     /translation="MILSDEKCDFLESIASFLSPKDVELVFVDSKEMQEINLEQRKQD
                     KTTDVLSFPLENIDESLPLGSVVINVDLAKEKAKELGHSYEEEISLLFIHAMLHLLGF
                     DHENDNGEMREKEKELIEHFNLPKSLIVRTLED"
     gene            28845..29534
                     /locus_tag="RJ266_000194"
     CDS             28845..29534
                     /locus_tag="RJ266_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7353979.1"
                     /translation="MIVFPLSSFNRYFGNNPLQTLTKIRDESIENGNPELTKKQREEL
                     GNDLIDLYKISKKFSDKIELVEGSIEDKLRNNELPESEVKNLFQWMDENAKHPRWMHI
                     DGVSYDEAYVKIFHTSKSIDEFKEKYLELQKKYFVDFNNIDSSQKKLQETSEEDKKAF
                     KPIQVESKSETYKDDNKMNELLRKLLETKFGTSDELEILFGMNFSNDNAGEFNKILSQ
                     NTSAKIIDIKA"
     gene            complement(29559..30485)
                     /locus_tag="RJ266_000195"
     CDS             complement(29559..30485)
                     /locus_tag="RJ266_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HDV7353980.1"
                     /translation="MIDFSKKPLFLAPMAGFSDLPFRNVVKKFGADITISEMISSNAL
                     VYESSKTLHMLERAELENPYIVQIAGGDKEVLKKAVQMLNEMDFVDGIDFNCGCPVNK
                     VVKQCAGSALLENLELFKNLVGVIKENNKKSLTSVKFRLGFNEKYPEKMAKICESLGV
                     DFISIHGRTRKQLYSGKADYGSIASAKASVKIPVIANGDINAQNAKEVYKITKCDGLM
                     IGRASVGNPWIFYEIKSGKSVDEKLKKEIILTHFDEMIKHYKDQGVSIFRKHLHEYSK
                     GHKDASTFRDTVNRIDNVEEMRKKIEEFFSLT"
     gene            complement(30482..31468)
                     /locus_tag="RJ266_000196"
     CDS             complement(30482..31468)
                     /locus_tag="RJ266_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7353981.1"
                     /translation="MKIKLFLLASFIYIALIFAFAWHLELGSYTLNISTYTFELPIMI
                     WLVIPLFIYMILAVLHIAFYGFLRYLKFKHFFKDAAKFEAYTQDLLLEKDLKTTFQTK
                     EFRSVAQLFKTIKTHEKIPHSNKINEILDLIDGLNKNEFFNLSKFKLENNNVLYLQNE
                     KNHLKNDANYAYNKLKNLNEIKDEFEEIAFNTLIEKASYEQIKNVKIPKKPSEVLTLI
                     KRFKEGNLELSVAEYEVLLSHNILSEKDYLNAAKLSTKLLNPDAILGIFNKIKNEKSE
                     ALRAYLYLLAEFGLLDELREQIHNDDKKFNDFKAFLALREKNIKIDLNQLIQ"
     gene            complement(31458..31820)
                     /gene="dksA"
                     /locus_tag="RJ266_000197"
     CDS             complement(31458..31820)
                     /gene="dksA"
                     /locus_tag="RJ266_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK suppressor DksA"
                     /protein_id="HDV7353982.1"
                     /translation="MKKNEIQNFKNILEERKKAILENLQSNSNEIEALHNSVPSDSVD
                     FSVIETGSQIDFAISTNLKEELIEIEDSLDKIKNGTYGICESCDDEIDSQRLKVKPHA
                     RYCITCRQIAEQGKKHEN"
     gene            complement(31832..32281)
                     /locus_tag="RJ266_000198"
     CDS             complement(31832..32281)
                     /locus_tag="RJ266_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HDV7353983.1"
                     /translation="MQVNIFCIQKSDEFKTCSEKYSKLISKYATLKEINVFNKKIALA
                     QNLNAIEAKKSYEEAFMPYKKGYCIALDEKGKDLTSIEFAKLIQDKNELSFFIGGAYG
                     LREEFNQSLDFRLSLSKLTLAHQFVKTLLLEQIYRAFCINNNHPYHK"
     gene            complement(32283..33125)
                     /locus_tag="RJ266_000199"
     CDS             complement(32283..33125)
                     /locus_tag="RJ266_000199"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HDV7353984.1"
                     /translation="MNFADIFSKIRRQQPSVKEAPNHWVKCQSCHALMYYKEIESCFN
                     VCPKCNYHMRISADERIKLLSDEGSFIEYDANLEAIDPLKFVDSKSYKKRLSEGESKT
                     GRKSSVISGECEINGLKTQLVVFDFSFMGGSLGSVEGEKIVRAIQRAITSKTSLVIVS
                     ASGGARMQESTYSLMQMSKTSAALKLLSKEKLPYISILTDPTMGGVSASFAWLGDLII
                     AEPEALVGFAGARVIKQTIGADLPEGFQKAEFLLEHGLIDAIVERGEQKQYLSDVLKF
                     FSGK"
     gene            complement(33134..33856)
                     /locus_tag="RJ266_000200"
     CDS             complement(33134..33856)
                     /locus_tag="RJ266_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HDV7353985.1"
                     /translation="MKEFLDACLNANLQIRKYLNNIPQNDLKLCSKLGYDKNQGYELD
                     LKCEQIFIKYLSCFGQIFSEESGLIGKASPKQMILDPLDGSSNFVSKIPFYGTSIALM
                     EKDQAKSAFVCNLVSQEIFAFNNKQAFKSNLSDPKYSPLTPNLFSKIGIVEKISLYPE
                     LLDFLTKNQLKFRSLGATALSLAYASYFSFVLILGKTRIFDTAAALAIHQNLYIEKNE
                     NFLLLSQDKKIFDIILEFLKNN"
     gene            complement(33856..36075)
                     /gene="bamA"
                     /locus_tag="RJ266_000201"
     CDS             complement(33856..36075)
                     /gene="bamA"
                     /locus_tag="RJ266_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HDV7353986.1"
                     /translation="MKKHLISICALVAMANAATIKDIKFIGLNHLSNTSAINIAGLKI
                     GEEINPAKINTAILNLYKQNYFENIAVENNNGILEIIVTEKPTIAKVTITGIASNDRK
                     QVESILGIKRGTLLDEGNIKEAIERIKAYYEAKSYFDTIVEYKKKTLENTDGLELEFI
                     VNRGENIIIDNVHLSGAKKFSYSDIEPAVVNKEKEFMGWMWGRNDGKLKVFELSNDSS
                     RIADEYMKKGYLDVQVSSPYLKTYTDTYQANLTYFIKEGKPYKIKSISIENPLFDDKQ
                     NAQTVKDLRSSAGKTINIEDIRKDVKTIETQSADLGYAFVEVYPDIQKNDQTQEATVV
                     FKVIPHDKVYIRNVIISGNSRTVDRVIRRELYITEGNLYNRTDLSESKNALKRTSYFD
                     DVNIKEEKVDDTHIDLIVDVKEASTGAISGGIGYGSSDGILLNASLSDTNIFGSGIKS
                     SVSVDKSDDTLSGRISLVNPRVLDSQYSLGGTLYSNDYEWDNYSEKNYGFDITIGRQF
                     ARYYNVSLTYNLEQSDIYHLSPTLLRTGYELGKSIKSSITPAITFNDTDDYYLPRSGI
                     IASTSLEYAGLGGDQEFISSSSKFNFYQGLQDYIGYDLIYRYKASFYKVWDEGYLPIN
                     QRIYLGGIRSIRGFESRTVSPKNQWGDEIGGTIAFANSVELSFPLIDRIKLRGSVFFD
                     YGMIGRKNLDEIKRMSTGIGIEWITPIGPLQLVFAKPLNDKKGDDTNSFEFNLGTRF"
     gene            36152..36979
                     /locus_tag="RJ266_000202"
     CDS             36152..36979
                     /locus_tag="RJ266_000202"
                     /EC_number="1.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HDV7353987.1"
                     /translation="MKIAIIGLGLMGGSLGLCLKENKLISCVYGMDLSKENEKDALQL
                     GLIHELIEFKDLALCDMIFVATPVDAIIEILQKLVDLPSNVTIIELGSTKRKIIESLP
                     KNLIKQTLFAHPMTGTENSGPKAAFKELYKDAVCVLCDSEIADDLHQKRAVEIFSHLG
                     MKIVFMDSKAHDHHAAIISHLPHVISFSLANFVMKEEDKRNIVHLAGGSFKGMSRIAK
                     SSPQMWESIFLQNKDNLLSSIDFFQQELERCKQMIQLDKNDELREWMKQANTLREIL"
     gene            37059..38432
                     /locus_tag="RJ266_000203"
     CDS             37059..38432
                     /locus_tag="RJ266_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDV7353988.1"
                     /translation="MAKRKGKTYLSVLILVLIAILIFFISRLSIFEKNPPQILMPDVV
                     YTDLKKPILVHIKDDESSIKNVQIILHKDDNTSAMVIADEKISNLKDITLQVALPKFG
                     YKENVKSFVLEVIAKDSSFWNFFSGNEARKQIAVLVDNTAPKINIISNSYQIEQGGAG
                     AVVFKADDANLDKVYIETNKGKIFKATPYVKEGYYAALIAWDARDEEFRAFVIATDKA
                     GNISKERIRYYFVNRKYRVSNINLTDKFLDGKIENLANQYAPKDNNLNRYEKFKFVNE
                     TLRNSNEKLIHEITSKVPEEKIDNFDLNLFLPLKNGMKVADFADHRYYSYNGQFVSDS
                     YHMGLDLASVAQAPIISNNAGKVVFAAENGIYGLNLIVYHGFGVYSLYGHCSSKNVDL
                     DEMINKQSIIGKTGTSGLALGDHLHFGVLVQGVETRPEQWQDKKWIENNIYNVLNDGK
                     KIILGKN"
     gene            38432..39316
                     /locus_tag="RJ266_000204"
     CDS             38432..39316
                     /locus_tag="RJ266_000204"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HDV7353989.1"
                     /translation="MKQLTLAKTVKGVGIGLHKGEPIEITLEPLEANSGIVFFRSDLN
                     ASYKASPENVINTQMATVLGDERGFISTIEHLMSAINAYGIDNVRIVLNANEAPVMDG
                     SSISFCMMLDEAGVKELDAPKKIMVIKKPIEVRDGNKFVRLTPTKEPRINYTIKFDNA
                     VIGEQSYNFEFSKKNYIENIARARTFGFLKDVQALRSMNLALGGSLENTIVVDENRIL
                     NPEGLRFKDEFVRHKILDAIGDLTLLGYRVFGDYTSYAGSHHLNHLLTKEVLKDKDAY
                     EIVSLEKTTQKAYEKVFA"
     gene            39355..39756
                     /locus_tag="RJ266_000205"
     CDS             39355..39756
                     /locus_tag="RJ266_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine biosynthesis
                     protein TsaB"
                     /protein_id="HDV7353990.1"
                     /translation="MIGIYQDNKLIKTYKSEEKASEFLPKILDELLKEYDFTSLIYAN
                     GPGSYMGIKISYVSLSTLSIVKNIPLFAVSAFELNGYKPISANKNFCFVYKEGEICLE
                     QNIPAEFFLPKNLQELKLNNDNLPFYFLDAI"
     gene            39765..40643
                     /locus_tag="RJ266_000206"
     CDS             39765..40643
                     /locus_tag="RJ266_000206"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HDV7353991.1"
                     /translation="MKILVPATSANLGPGFDCLGLSLKLFNETQIQKSGVFSISIGGE
                     GSDNIFLKKNNIFVNIFYEIYEKLSGKKDNFRFIFQNNIPLSRGLGSSSAVIVGAIAS
                     AYYMSGFKVEKERILDEALIYENHPDNIAPATLGGFVCSLVEKNKVYSIKKEIDKDLA
                     AVVVIPNLAMSTEQSRQALAKNLSFNDAVFNLSHASFLTACFLEKKYEFLKFASQDKL
                     HEINRMKNLPELFEVQKFALENKALMSTLSGSGSSFFSLAFKDDALALAKKIQTKFKD
                     FRVQYLEFDDNGFEIC"
     gene            40668..40925
                     /locus_tag="RJ266_000207"
     CDS             40668..40925
                     /locus_tag="RJ266_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxR family protein"
                     /protein_id="HDV7353992.1"
                     /translation="MKKHIPIRMCIVCKNRFEQNMLFRFKVVLGDIVPKAEHGRSGYL
                     CQNCIEREDKVLQKAFSKICKNLNTKITQQGLKEIFLNGKD"
     gene            40912..43527
                     /gene="infB"
                     /locus_tag="RJ266_000208"
     CDS             40912..43527
                     /gene="infB"
                     /locus_tag="RJ266_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HDV7353993.1"
                     /translation="MAKIRIHEIAKELGYDSKEIIEKANELGLGIKTASNAVEPEIAA
                     AIYEYIQTREIPEAFKKNIKTPTAKKPKKENIKEQEKLNESEKKEPKKEEKLKQEVKK
                     EELKIEKENAKEEEKQEIIDAHKPQSLASATLAKRRGLVIVKKKKDEEEIQVKKEEVK
                     NSNDISINNEERLSLKTMFSNADESLKKKKKEKKSFVASKKESTEKMNFLDEHDFGDI
                     SLDDEDEVVLPDFSVKEQEKPQNINKKQPNFIRQAVGNSAGFGLEGGIQRRSRKKPSK
                     KIEKKEVEEVGSVAISKEIRVYEFADKIGKSTSEVISKLFMLGMMTTKNDFLDEDAIE
                     ILAAEFGIEINIINEADEFDYVKDYEEETDEKDLVTRAPVITIMGHVDHGKTSLLDYI
                     RKSRVASGEAGGITQHVGAYMVEKNGRKITFIDTPGHEAFTAMRARGASITDIVIIVV
                     AADDGVKPQTKEAINHAKAAGVPIIIAINKMDKEAANPDMVKTQLAEMEIMPVEWGGS
                     YEFVGVSAKTGMGIEDLLEIVLLQADILELKANPKSFAKASIIESSVQKGRGAVATII
                     VQNGTLTVGSTVVAGEAYGKVRAMSDDQGKALKEIKPGECGVIVGLSEVADAGEILIV
                     VKTDKEAREYANKRHEYNRQKELSKSTKVSIDELGAKIKEGNLKALPVILKADVQGSL
                     EALKASLEKLRNDEIKVNIIHSGVGGITQSDIELASASENSIVLGFNIRPTGEVKERS
                     KDKGVEIKTYNVIYNLLDDVKALLGGMMSPIISEEQLGQAEIRQVINVPKIGQIAGCM
                     VTEGVINRGAKIRLIRDGVVVYEGNVSSLKRFKDDAKEVAKGYECGVGIEGCDDMRVG
                     DYIESYKEVEEQASL"
     gene            43524..43886
                     /gene="rbfA"
                     /locus_tag="RJ266_000209"
     CDS             43524..43886
                     /gene="rbfA"
                     /locus_tag="RJ266_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HDV7353994.1"
                     /translation="MNPSEIKKLRTESILKELIPEALANLDDENLKNLCVVDVECKKG
                     RYDAFVYLDKMFFNVHEQEKILSSLKKASRALQNYCMSEQGWYRCPNFHFKFDDRLEY
                     QNHMDALFEKIKKDKNES"
     gene            43876..44298
                     /gene="rimP"
                     /locus_tag="RJ266_000210"
     CDS             43876..44298
                     /gene="rimP"
                     /locus_tag="RJ266_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HDV7353995.1"
                     /translation="MNLEALCKEAELSFYDDELVSENGKKIYRIYVQKEGGVNLDDCA
                     KLSEILSPIFDVEPPVNGEYFLEVSSPGLERKLSKIEHFAKSIGELAKITTNEKEKIE
                     AKIIAVDDENITLENLENKEKTTINFNDIKKARTFIQW"
BASE COUNT        16001 a         5770 c         8019 g        14513 t
ORIGIN      
        1 tacttaattt attgtattcg aaagtagttt tcttattaac caattattaa ctaaaaatgc
       61 aatatcatta ttttatgatt taaatcaaaa atttttgatt ttaaattaaa atacttttat
      121 gaaaggttca aaatgggaac aagaaaagaa catgatttta ttggggaatt agaaatctct
      181 gatgaggttt attatggagt gcaaactttt agagctgttg aaaattttga tatttctcat
      241 gatagattaa aagattttcc tcgctttgtt agagctttgg ctagagtaaa aaaagctgca
      301 gctatggcaa atcatgaatt aggtcttttg gataaaaata tccaagatgc gattattaaa
      361 gcgtgcgata aaattttaga aggcgggtat tatgatcaat ttgtagtaga tatgatccaa
      421 ggaggtgctg gaacaagtac aaatatgaat gctaatgaag ttatagcaaa cataggactt
      481 gaacttatgg gtcataaaaa aggtgaatac caatatcttc atccaaatga tcatgttaat
      541 ttaagtcaaa gtactaatga tgcttatcct acagctttac accttgcctt gcatgattat
      601 ttaagcgatt tggcaaaagc tatggaacat ctaaaaaaag cttatgagag aaaagctgaa
      661 gaatttaaag atgttcttaa aatgggtaga acccaactgc aagatgctgt acctatgact
      721 ttaggtcgtg aatttaaaac ttttgccgta atgataggtg aagatataca aagagtatta
      781 gaagctagaa aattgatttt agagatcaat ttgggtggaa ctgctattgg aacgggaatt
      841 aattctcatc ctgattatcc gaaggttgta gaaagaaaaa taagagaagt gacaggtttt
      901 gaatatactg tggctgagga tttgatcgag gcgactcaag atacgggagc ttatgtacaa
      961 atttcaggtg ttttaaaacg tgttgcaaca aaactttcta aagtatgtaa tgacttaaga
     1021 cttttaagca gtggtccaaa atgtggtctt aatgagatta atcttccaaa aatgcaacca
     1081 ggtagttcta tcatgccagg taaggtaaat cctgttattc ctgaagtagt taatcaagtt
     1141 tgttattttg ttattggagc agatgtaact gtaacttttg cttgtgaggg tggacaatta
     1201 caacttaatg tttttgaacc agttgcagcg tatagtttat ttaattctat tgtaatgcta
     1261 gaaaaagcaa tgtatacttt agctgataaa tgtatagatg gtattactgc aaatgaaaaa
     1321 atttgttcag acttcgtcta taattcagta ggtatagtaa cagctttaaa tccttatatt
     1381 ggctatgaaa attcagcttc tatagctaaa gaggcaatga acactggaaa aagagtggct
     1441 gatattgcgc ttgaaagagg gcttttaagt aaagaacaaa ttgatgaaat tttaactcca
     1501 tcaaatatgc taaatcctca catggaagct aaaaaatagc attttaggat ttaatatgga
     1561 tataatgata attttgcaag taatcgtcct tcttggggcg atttttatcg gtattcgcct
     1621 aggcggtatt gctataggtt atgctggagg attaggtgta gttatactag gacttgtttt
     1681 aggtatgaaa cctggtaata ttccttggga tgttatttta attattgctg cagctattgc
     1741 agcaatttct gctatgcaac aagcaggtgg acttgattat atggtaaggg tgacagaaaa
     1801 aattttaaga tcaagcccta aatttataaa ttatttagct ccagcttgtg ggtggttgct
     1861 tacaatctta gcaggaacag gaaatgcagt attttcttta atgcctgttg tagttgatgt
     1921 tgcaaaatct caaaatataa aacctagtgt tccactttca ttaatggttg tttcttcgca
     1981 aattggaatc actgcttctc ctgtgagtgc agctgtggtt tatatgagcg gcgttttaga
     2041 gccacttgga tggaattatc caactttaat tggaatttgg atcagtacaa cttttatagc
     2101 ttgtatgctt acagctttta tagtgagttt aatcactcct atggatttaa gcaaagatag
     2161 cgtttatcaa gaacgtttaa aagcaggact tgttaaagat gcaggagcta ttttacatgg
     2221 tgaagataaa ccaggtgcta aactttcagt aggaattttc ttgatcactg ttttggcagt
     2281 tgtgctttat gcaaccgcaa tttcaagcaa tattaaatgg attgatcctg ttgtggttcc
     2341 aagagatgca gctattatga gctttttact tactgcagca actttgatca cttggctttg
     2401 taaagttgaa ccaggtaaaa ttcttgatac cagtgtattt aaaagtggta tgactgcttg
     2461 tgtttgcgtt tttggtgtag catggcttgg aaatactttt gttgcaggac acgaagcttc
     2521 tattaaagaa gtagcaggcg actgggttaa acaaacccct gctatgttag cagttgcatt
     2581 tttctttgca agtatgcttt tatattctca agcagcaacc gcaaaggcca ttgtacctgt
     2641 aattatcacc gctttaggaa tttcagcagc aaatccgcat gattcttata tgcttgtagc
     2701 ttgttttgca gcagtttcgg cactttttgt gcttccaact tatccaacct tacttggtgc
     2761 tgtgcaaatg gatgatacag gaacgactag aattggtaaa tttatattta atcactcttt
     2821 ctttatacca ggagttttag ctattgcaat tgctgtagca ttaggctttg tattagctcc
     2881 tatgcttgtt taaatcaaac cctaggtttt tctctcctag ggttaaaatt ttttcattag
     2941 tttttaagta tatactacgc tataatattc atttttaatt ttctttaaga aaggaattta
     3001 atgaagataa aagttgggtt gattttttca ggtattgttt gccttttttt aacagcttgt
     3061 gttaatcagg ttaaacaaaa tacaacattt gaaaatgctc taacacaaaa atattgtggt
     3121 gatgattttt tcaatcaaaa tttagaaaaa attaaaaaaa atgatgatgt catttataca
     3181 ggattaaatg caggtttgat tgctagaaat tgtggtgatt ttaacaaaag taatgtattt
     3241 tttgatgctg cggaagaatc ttataaatat gatgtggatt tagaaaatgt aggctctaaa
     3301 gcagctaaat ttgttggtac aaccttgctt aatgatacta tagttgatta tgatggttct
     3361 ttatatgaaa gaattatggt taatatatat aaagctctaa actatatgga agaagatgat
     3421 tatgaaaatg caagagttga gtttaatcgt gctttaatgc gtcaagataa ggcaaaagaa
     3481 tattttgcta aagaaattga gaaaaatcgt gctgatttag ataaggcaaa agaagataaa
     3541 aattatgata aaaatatgaa tgaaaactca aaagttatag aagcacaata cgataacttg
     3601 tttaaagagt ttgatacaac aaaaaatttc ataaatcctt atgcgactta tcttgcttca
     3661 atatttttct ttatggataa agattataga aaagctacag atttatttag agaagtagct
     3721 attatttatc caaaaaataa aactatcaaa aaagaggcta aaatttttaa agaatatgcc
     3781 acaaaaataa aagtcaaaaa agctaaaaaa tatgtttttg tagtttatga aaatggattt
     3841 ggtgtagtta aggatgaatt tgctttaacc ttacctttta tagtggataa aaaaattatt
     3901 agcacaaata ttgctttaca aaccttgaaa aaaagggaag cttcttttgc aaatttaaat
     3961 ataaatggtc aaaatacaaa tgattttgta gatttagaca atattgttgc tactgaattt
     4021 aaaataaata tgcctgcaat gattgctaaa gccttagctc aaactataat taaaaccact
     4081 ttaaatgtag ctgttgcaaa taatgactct acaggtggat ggctaagtct tgcaacagca
     4141 gtagcaactg ctgcaaccaa caaagctgat gtgcgttctt ggagaggttt accaaaaagt
     4201 attgccatgg caacaataga aaacgacgga aatttagaaa tcaaagatcc acaaggcaat
     4261 attttgtttc aaaaatcatt ggataaaaat aaaaatgctc ttgtgatagt gcgttctttt
     4321 gctccgtatt tacctgcaag tgttgctatc atggaaaaat aaggctaaaa gatgaaaaaa
     4381 attattttat ttattttaat gtttttactt agtgcttgtg caccaagtta tcaaataaat
     4441 tcaaatcaaa atactgtaat tttaggttca aatttaccaa aaagtttagt aaaacaattt
     4501 caaaagcgta taaatagcaa tggttattta gaatttgaag tgattttacg cagtactttt
     4561 gctaaagatg taatttataa agtggattgg ttagataaag atggttttgt gctaagagat
     4621 gttttaaatg aggactatca agcccttaga attccagcag gacaagaggt gattcttcgt
     4681 aaacttgcat ctgatataag agcgaaggat tttagattag aaattaaagc aaaaaattaa
     4741 tctcatttta ggaaggataa atcatgaaaa aaacaaaaat tttaggaaca gctcttattg
     4801 gagctttgct ttttagtggt tgtgcgcaaa cagcttatac agatggaaag gcaagtcagg
     4861 tgaaaaaagg ggatgcttta accttgggtc ttgatagaca agattttgaa agtgcagctg
     4921 aaactatgat aaatagtatg ttaagcgatc ctgcttttgc aaatattaaa ccaggtacaa
     4981 gaaaggttat tgctattggt agggttgtga atgatacccc gcaaagaatc gatactgaaa
     5041 aactcaccgc aaaaatcact tctgcattaa gaaaatcagg taaatttgtt ctaacttcag
     5101 cagttgctgc aggcggagca cttgatagca tgagtgaaga tgtaagagaa ttaagagata
     5161 atgatgagtt taatcaaaaa accatagcaa aaaaagggac attggtatcg cctgattttt
     5221 ctcttgcggg taaaattaga caagataatg taaaacttag caatggtaaa actcaagtag
     5281 aatacttttt cttactaaga cttactgatt taacatcagg tttagtttat tgggaagatg
     5341 aacaaactat cgataaaacc ggttctagta aaacagttac ttggtaaaat aaaaattaat
     5401 ttatgaataa aatttttagc tcaagtgttt agcttgagct ttttttatga tttttaaaag
     5461 gatatgaaat gaaaaaaata ttatttatcg gctctttagt tatggcaagt ttactttatg
     5521 cacaaggttc ccagcctgta gaaattacac aacaagatat aaatactcaa aatgaaatgt
     5581 ctgatgcaag tactaaggat attaccccaa aatcaattga agattttttt gaagaatttg
     5641 cggataattt cggtatagaa tatggtataa ccaaagatgg aaaaactttt tatacaggaa
     5701 aaagtactgt tgctgtaaat gatactgatc cacaatttgc acaagcttta caaaatgctt
     5761 atcaaaaagc aatgttaaat ttgcaaagtg aatttataag agatgttttt ggaagaattg
     5821 ctacaagcag gattcaaaat tatgaagcag ataattctac taatgctaag gaatttgatg
     5881 aattgccaaa aggtgataag gttgatcaaa ttttaaataa acttacacaa ttagctggtg
     5941 ctcagcttga taaggcatta aaagatttag gtatagatac aaattcttta agcgaagata
     6001 gaaaaaagac tttattaaag caagaatttc ttaataaaac tatgacaaat gccataggtt
     6061 ctatgagtgg acttgttcct gtgcaaacta tagttacaca aagaagaggt gagtatgatg
     6121 taggtgttat tgctgttatt tccaataaaa ctcgccaatt agcaaaagat atggcactag
     6181 caagacagag tgctattaag ggtaaaggca aggcaataag tgagtatctg ccaaaagata
     6241 caaaaggctt tttaaatgaa tatggaattc gcttagttta tgatgaaaat ggtgcgccta
     6301 ttattttaag ttatggaaac tggggttatg tagcagatcc tagcaatgct aaaaaaacaa
     6361 atattttaga agatagagcc aaagaaacag cacttactat ggctgatgct gctattatag
     6421 agtttattaa tacaaattta agtcttaaag atgaaagaac aactggtgat acttacgagg
     6481 aaatcatcaa acaaagtatt aatgttaatg atagttccac tcaagaacaa actcaaaaca
     6541 taacaaatat tattgataaa gtaaatagta aaataaaagc aagcgcaagc ggtaaaattc
     6601 gtggtattcg tactcttaaa aaatggagct atacaagtga aaatggtatt gaacatgtag
     6661 gagctgtgag attttattct tatgaaaatt tagctaacac aaatgaggct ttaaattcaa
     6721 agtcaaatgc aacaaaaaat gaagctaaaa aatcttctag catacaaaga agctctaatg
     6781 ttgtaaatag tatggatgat ttttaaaggt aaaagatgaa aataattaaa attctttttt
     6841 taggattatt tttaagccta agtcttaatg ctaaagttgt gactacaact tcaacaaaat
     6901 caagcacagg cgaaggcaca ggcttgacta gggaagatgc gataaacaat gccattatag
     6961 aagctatagg aaaaatgagt ggagtaagca tcaattctct taagaaatct aacactagcg
     7021 tttcaactga taattcaggt tcaaatatac aagataatta cagcgagcaa atttcaaaag
     7081 ccaccaaagg tagagctgat acttatgaaa tcaatagtgt tgaacaagat gcaaatggta
     7141 aatatacagc caatgtaacg atttttaaaa ccacaacaac aaaaaagtat caagttccag
     7201 gtttaagcgc agataataga agaagtatta ctgtttttga ttctactcca gatgctgcaa
     7261 aaagaggtat aggctcagct ttgcaacaaa aaatcatttc tgatttattg caaagtcgta
     7321 aatttaatgt tttagaccgt gattctagtg gctattatga aatggaaaaa gctttaatca
     7381 aaagtggcga cgcagctagc gatgaagttt ataaacttaa aaatatgtta gcaacagatt
     7441 atattttatt gttttctatt tcaggacttg aaggtaaaca aaaaacaagc aatttaacag
     7501 gaaaaagcaa aactgaaatt gaagttatcg tagattatcg tgtgctttta tttgctacaa
     7561 gacaaattaa attttctaat actttaagca tgaaagtcaa tcttaaagac aatagtctta
     7621 gtgccaatga aaccgcactc aaacaaattg caaatcgtat agcaggagat attttaaacg
     7681 caatttatcc tttgaaagtt gcaagtgttg aaaacaatga agtaatattt tctcaaagct
     7741 taaatcaagg tgatgtttat gaatgttttg ctcttgggaa ggttataaaa gatacttata
     7801 caaaagaaaa tacaggaaga gtagaaagca aaacaggaag tattgaaatc actcgcacaa
     7861 gccctaaatt ttcttatgca aaaatcacag aaggtagtgt aaaagtgggc gatatttgca
     7921 gacctttaag taatactggt agtggaaatg gctacactat aggtcgtgat gcaaattatc
     7981 aaacccaaga aggcggcgga gtaaatctag gcttttaaat ttttagagtt tgatttttct
     8041 caaactctaa actctttctt aaattcatca aaaattaaag aaaaattttg taaaatcgaa
     8101 attttattaa accactaaag cttttaaatc cgttattacg gtgctttatg gtactaccaa
     8161 tttataagga aaagcaatgt atgctattat caaacacagc ggaaagcaat acaaagtaag
     8221 tgttggcgat gagctaaaac tagatcactt tgaagctgaa agcaaagcaa gtattgaagt
     8281 aagcgaagtt cttgctatca atgataaaga attaaaggta ggtgcgcctt tcgtagcagg
     8341 tgcaaaagtt gttttggaag tgatcaatca cggaaaagat aaaaaagttg tgatttacaa
     8401 aaaaagacgc agaaaagatt ctaaactcaa acgcggtttt agaagacaat ttactcgcgt
     8461 tgtagtaaaa gatatcaaag cttaaggagt aaagaatggc acacaagaaa ggtcaaggtt
     8521 caactcaaaa taaccgcgat tccataggtc gtcgtttagg tgttaaaaaa tttggtggcg
     8581 agtttgttag agctggaaat atcatcatcc gccaaagagg aactgcaact catgcaggta
     8641 acaatgtagg catgggaaaa gatcatacta tctttgctct aattgatggt tttgtaaaat
     8701 tcgaaagaaa agacaaagat agaaaaaaag tttctgtata tcctgcataa gtttttagga
     8761 cgctttttag cgtcttgaaa actttaaatt tataaattta acttctttta tttactcaaa
     8821 tttagcttta taaatttaaa gtcaaaggca attaaatgtt tattgatagt gttaaaatta
     8881 ctttagcttc aggcgatggt ggcaaaggtg ctgtaagttt tcgccgtgaa aaacatgttc
     8941 cacttggtgg ccctgatgga ggagatggtg gaaatggtgg tgatattatt ttcgtatgtg
     9001 ataataatac ccacactctt gtaaatttca aaggcaaaag agaattacgc gcgcaaaatg
     9061 gtgctggtgg aatgggacgc aataaaaatg gcaaaaaggg tgaaaattta gaacttatag
     9121 tgcccgaagg aacgcaagtt atcgatgcac aaaccaatga aattttactt gatcttaccg
     9181 aagaaggaca aagagagctt tttttaaaag gtggaaaagg tggacttggc aacacccatt
     9241 ttaaacacgc caccaatcaa cgccccgatt acgcacaacc tggtataaaa ggagaaagtc
     9301 gcttagtcag acttgaactt aaacttattg ccgatgtagg gcttgtgggc tttccaaatg
     9361 tgggaaaatc tactcttata agcgttgttt caaatgcaaa acctgaaatt gcaaattatg
     9421 aatttaccac ccttactcca aaacttggac ttgtagatgt aaatgagtat aattcctttg
     9481 ttatggctga tattccaggg attatcgaag gagcaagtgg gggtaaaggc ttaggacttg
     9541 cctttttaaa gcacatagaa agaacgagct ttttactttt cgtgctagat cctatgaggc
     9601 aaatgccttt aaaagaacaa tttatagtac taagaaaaga acttgaaaaa ttttccaatg
     9661 aactttttgg gcgtaaattt ggcatcatga tttcaaaaag tgatagtgtt cgtttaggag
     9721 aggaatttgc cgagcaaatt gctttaaaca ttaatgagtt agacaattat ctcaaagaaa
     9781 taaataatcc acaaagcttt ttaatcaaag tctcaagcct tgaaaaaaca ggacttaaag
     9841 aacttaaatt catgctttta gaagaaatta aaactttaag aaataacaaa aaaaatttta
     9901 acaatctagg aagtgtttta tattaaaaat ttcaaacact ccctattttt tcaaaaataa
     9961 ctagtttata tgaaattttg gctaaaatta taaaaatttt tcaaggaata agcatgaaaa
    10021 gaatagttgt taaagtgggt tctcatgtga ttagcgaaga aaacacttta agttttgagc
    10081 gtcttaaaaa tttagtcgca tttttagcta aactcatgga aaaatatgaa gtgattttag
    10141 taacttcagc ggctatttca gcaggacaca ccaaactaga tatcgataga aaaaacctca
    10201 ttaataaaca agttttagcc gctattggac aacctttttt aatcagtgtt tataacgagc
    10261 ttttagccaa atttaataaa ctaggtggac aaattttact tacaggtaag gattttgact
    10321 ctagaaaagc taccaaacac gcaaaaaatg ctatcgatat gatgataaat ttaggaattt
    10381 tgcctattat caatgaaaat gacgctacag ctatagaaga aattgtcttt ggtgataatg
    10441 acagcttaag tgcttatgct acgcattttt ttgatgcgga tttgcttgtg attttaagcg
    10501 atattgatgg gttttatgat aaaaatccta gtgaatttag tgatgcaaag cgtttagaaa
    10561 aaatcactca tattaaagaa gaatggctac aagcaaccat aaaaacaggt agtgagcacg
    10621 gaacgggtgg tatagtaacc aaacttaagg cagctaaatt tttacttgaa cacaataaaa
    10681 aaatgttttt agcaagtggc tttgatttaa gtgtggcaaa gacattttta ttagaagata
    10741 aacaaataag tggaactttg tttgagtgat taatttatta aattctcttt taaaatcaaa
    10801 taagttataa ttaaaacttt taatttcaca caaagcgaaa aaatgaaaaa aattattttt
    10861 atgggtactc catcttatgc aacttgtatt ttaaaagcac tagtagaaaa tgaaaatttt
    10921 aaactcgtag cactttttac ccagcctgat aaagccgtag gtagaaagca aattttaact
    10981 ccaagtgata ctaaggcttt tttaagtcaa aattatccta gtattcctat ttttactcca
    11041 agttctttaa aagatgaaaa tattataaga gagattaagg atttaaatcc tgattttatt
    11101 gtggttgctg cctatggaaa aattttacct aaagccattt tggatttagt accttgtgtg
    11161 aatttgcacg cttctttact tccaaaatac cgtggtgcca gtccgattca aagtgcgatt
    11221 ttaaataaag atgaaaaaag tggagtttgc accatgctga tggaagaagg gcttgataca
    11281 ggtgctatac ttgaaagctt agagtgtgat ataaaagata aaaattcaag tgaagttttt
    11341 gaacttttag caaatttggc cgctaagctc atcctcacca ctcttttaaa ttttgataaa
    11401 attaccccta aaaaacaaga ggaaagtcta gcaacgcttt gtagaaaaat caaaaaagaa
    11461 gatgggctta taaatttgca aaatgcaaga gaactttatc aaaaatatct agcttttacc
    11521 ccttggcctg gagttttctt ggaaaatgga cttaaattct tagaacttga acttgtggat
    11581 gaattaaaac aaaatgctag gatgggtgaa attttagaat tagaaaaaga aagttttttg
    11641 cttgcttgca aacaaggagt tttgcgtatt aaaaaacttc aagaaagtgg aaaaaaagct
    11701 cttgatggta ggacttattt aaatggaaaa aggcttaaaa gtgaaaatag tttgtgttga
    11761 aagtatagac tcaactcatc tttttttatg cgagcaaata cgcaatggaa agattgatgg
    11821 aaattttgct atttatgctt tagaacaaac aaatggagtt ggaagtaggg aaaattcttg
    11881 gcaaagctct aaaggaaatt tacatctttc tttttgtatt aaagaagaag atttgccaaa
    11941 agatttacct ttggcttctg taagtattta ttttgcttat ttacttaaag aacttttaca
    12001 agaaaaaggt tctaaaattt ggcttaaatg gcctaacgat ctatatttag atgataaaaa
    12061 agctggaggg gttataagtg ctaaaatttc aaattttatc ataggcggta tgggtttaaa
    12121 tctgaaattt tcaccccaaa atacagcttt atgcgatata gaaattttgc ttaaagattt
    12181 agtgagtgag tttttgcaaa aagtagaaaa aaaaatttta tggaagaata tttttagcaa
    12241 gtatatgtta gaatttgaaa aatcaagaaa atttagcgtc catcatgaag gtaaagtttt
    12301 ttcacttgaa aattcttttt tgtatgaaga tggttcaatt ttactaggtg ataaaagggt
    12361 gtatagttta agatgagcga aattattaca atagcaaatc aaaaaggtgg agtaggaaag
    12421 actacaacag cagtaaattt agccgcttct ttagctgtgg ctgaaaaaaa agtacttttg
    12481 attgatgttg atccgcaagc taatgcgact acaggacttg gttttaatcg taataattat
    12541 gagtataata tttaccatgt ttttatagga agaaaaaagc tttcagatat tattttaaaa
    12601 acagaattgc cacaacttca tttagctcct tcaaatatag gtcttgtagg tatagaacaa
    12661 gagcttgcta aaggtgaaaa taatgagaaa aaaatgctgc ttaaaaatca aattcaagaa
    12721 gtgattgatg agtatgattt tattattatt gattctccgc ctgctcttgg aagtattact
    12781 ataaatgctt ttgcagcaag cgatagtgta attatcccta tacagtgtga attttatgcg
    12841 cttgagggcg tggctatggt tttaaataca attaaaatta tcaaaaaaac tattaattct
    12901 aaactcaggg ttcgtggatt tttaccgaca atgtatagct ctcaaaataa tctttctaaa
    12961 gatgttgtag atgatttgaa acaaaatttt aaaaaacaac tttttactat taatggaaac
    13021 gaagatgact ttattgtgat ccctcgcaat gtaaaacttg cagaaagtcc aagttttgga
    13081 aagcctataa ttctttatga tattaaatcg ccaggttctg ttgcttatca aaatttggcg
    13141 tattctatat taggataatt ataatgggat taaataaaga taggggttta agtagtttaa
    13201 tcagtgatat ggatactgtt tatagtaaag aattgggttt tgataaaaat caaagcacta
    13261 tgatagaaat tgatcaaatt tcacccaatc catttcagcc aagaaagaat tttgatcaag
    13321 aagctttaga tgagcttgct aattctatca aagaatttgg acttattcag cctattattg
    13381 tatttaaaaa aaataataaa tttattttaa ttgctgggga acgtcgctta agagcagtga
    13441 aagcattagg aaaaaaagaa attctagctt ttattgctga tattgatgag aataagctta
    13501 gagaattggc tcttattgaa aatatacaaa gagagaattt aaaccctatt gagcttgcta
    13561 attcttataa ggatttaatg caagttcata aaattactca agagaattta gcagaactta
    13621 ttcataagtc tcgtactcaa ataacaaata ctttaagact tctgaattta gatattagaa
    13681 ctcaagagtt gattgcttct ggaaaaattt ctcagggtca tgctaaagtt ttggttggtt
    13741 tagatcaaaa agatgaaaaa atgttggttg atagcataat aggtcaaaaa cttaatgtta
    13801 gagatactga aaaaatagtt aaaaaaataa aaaataatga aagcttacct aatcaagaat
    13861 ttgaagatga aataaaaaaa ttaaaacaaa tactaaatcg ctttggattt gactgcaaaa
    13921 ataaaaataa tgattttgta attcatttag aaaatattga taaaattaaa aaattaatca
    13981 aaatgcttga aaagttttaa ccaaaatctt agctttttta tggtaaaata gttcttcaaa
    14041 aattctaacc aaggagaatt atgtttgaag atatgcatcc ttccataatg cttgctacta
    14101 tagctatttt tttggctatg atagttattt taaatagtat gctgtataag ccgcttttaa
    14161 aatttatgga tgaaagaaat gattctataa aaaatgatga gaataaagta aaagaaaatt
    14221 ctcaagaagt tttatgtgtg aatgataaat tagaagttat tcatattaac actagagaag
    14281 aaattcaaaa aatcaaacaa agtgctatag ctgctgctaa agaagaggca gagcaaattc
    14341 ttagaagcaa gaaagaagaa ttagaaagaa aaatggccag cttttatgca gatttagcta
    14401 ttcaaaaaaa agagttacaa gaacatttaa acatacattt acctgagctt aagcaagctt
    14461 tgcaaaataa cataaagaaa atttaagagg agagaaatga gtaagttatt atttattata
    14521 tttttgctac ctttgtatgc ttttggtgca tcaaacggta gtggagaata tgatattatt
    14581 ccaaggacta ttaattttct aatttttgtg ggtatattgt attattttgt tgcaactcca
    14641 tttaaaaatt tttacaaaaa ccgtattgta aaaatttctt ctaaacttga tgaaattcaa
    14701 aaaaaacttt tagaaagtaa agctaagaaa ttagatacga tgaaaaaact tgaagaagct
    14761 aaggcaagtg ctgctgccgc tttaattaca gcaaaaaaag aagctgaaat cttagttgaa
    14821 aatattaaga aagaaactca agatgagtta gatttacttc aaaaacattt tgaggaacaa
    14881 aaagattatg aatttagaaa aatggaaaaa gaattagtat caaatatttt aaatgaaatt
    14941 ttttctgatc caaatatgac attaaaacag agtgaaataa tagaacttat gatgaagaag
    15001 gtatcttaaa tatggaaaat ataattgcaa gaagatatgc aaaagcgata gcttcaagag
    15061 ctgatataaa tgatttttat cagaatttgt gtattttaaa ttctgctttt gttttgccaa
    15121 aatttaaaaa tattatagaa tctaatgaga ttaaaaaaga aagaaaaatg gaatttcttg
    15181 attctttttt tgatattaaa aattctagtt ttcaaaattt tttaagactt ttgattgaaa
    15241 attcaagatt agaatgcatt cctcaaatag ttaaagaact tgaaagacaa aaagctttta
    15301 aagaaaatat ttttgttggt attgtatatt ctaaagaaaa attaagtcaa gaaaatctta
    15361 aagatcttga agtcaaactt aacaaaaaat ttgatgcaaa tattaaacta aataataaaa
    15421 tcagtcaaga tgatagtgtt aaaatagaat tagaagaatt aggttatgaa ctttcttttt
    15481 ctatgaaagc tcttcaaaat aagctaaacg aatatatatt gaaaattatc taaggagaaa
    15541 aagtaaatga aatttaaagc tgatgagatc agttcaataa tcaaagaaag aattgaaaat
    15601 tttgatttaa atcttgaaat tgaagaaaca ggaaagatta tttctgtagc tgatggtgtt
    15661 gctaaagtat atggacttaa gaatattatg gctggagaaa tggtagaatt tgaaaatggt
    15721 gataaaggaa tggccttaaa ccttgaagag tcgagtgtag gtattgttat acttggaaaa
    15781 ggagaaggtt taaaagaagg tgcttctgta aaaagactta agaaattact taaagttcca
    15841 gtaggtgagg ctttgattgg ccgtgttgta aatgctttag gtgagccaat tgatgctaaa
    15901 ggtgtgatca atgctaatga atatcgtttt gttgaagaaa aagcaaaagg tattatggcg
    15961 agaaaaagtg ttcatgagcc tttacataca ggaattaaag ctattgatgc gcttgtgcca
    16021 attggtcgtg gtcaaagaga gcttatcata ggtgatagac aaacaggtaa aactactgtt
    16081 gctgttgata ctattatatc tcaaagaggc caaggagtta tctgtatata tgttgcaatt
    16141 ggtcaaaagc aaagtacagt ggcacaagtg gttaaaagac tagaagaaca tggtgctatg
    16201 gaatatacta ttgttgtaaa tgccggtgct tcagatcctg cggctttaca gtacttagct
    16261 ccatatactg gtgtaaccat gggtgaattt tttagagaca acgcaaaaca tgctttaatt
    16321 gtttatgatg atttgagcaa gcatgctgta gcttatcgcg aaatgtcttt gattttacgt
    16381 cgtcctccag gtcgtgaagc ttatccaggc gatgtttttt accttcattc aagattgctt
    16441 gaaagagcaa gcaagctaaa tgatgaatta ggtgctggtt ctttgacggc attgccgata
    16501 attgaaacac aagcaggaga tgtttctgct tatattccaa ctaatgttat ttcaattaca
    16561 gatggacaaa ttttcttaga aactgattta tttaactcag gaattcgtcc tgcaattaat
    16621 gttggtttat cagtatctcg tgtaggtggg gctgctcaaa ttaaagctac aaaacaagtt
    16681 tcaggcacat taagacttga ccttgctcaa tatagagagc ttcaagcttt tgcacaattt
    16741 gctagtgatt tagatgaggc aagtagaaaa caacttgaac gtggacaaag aatggttgaa
    16801 cttttaaaac aaccacctta ttctccgctt agcgttgaaa aacaagtagt tttaattttt
    16861 gcaggaacca aaggtttctt agatgatatt gctgtttcta gaattaagga atttgaagat
    16921 ggaatttatc cttttattga ggcaaaacat ccagatattt ttgagcaaat tcgctctaaa
    16981 aaagctttag attctgattt ggaagaaaaa ctagctaaag ccattaatga gtttaaagca
    17041 aatcatttat aaggtctttt atgtctaatt taaaagaaat taaaagaaaa attaaaagtg
    17101 ttcataacac tcaaaagact acaaatgcta tgaagctagt ttctactgct aagttaaaaa
    17161 aagcagaaga agcagctaaa agatcaaaaa tttatgcaca aaaaatcgat gaaattttga
    17221 gtgaaatttc atttcagatc aataaaattg ttcacaatga agatgatgtg cgtttatctt
    17281 tgtttcataa aaaagaacaa attaaaaccg tagatttaat atttatcact gcagataaag
    17341 gcttatgcgg tggttttaat attaagactt taaaaacagt aagtgaaatg ctaaaagaat
    17401 atgaagcaaa aaatattaat attcgtctta gagctatagg taaaactggg attgaatatt
    17461 ttaattttca aaaaatagaa ttgttagaga aatatttcca tcttagttct agtcctgatt
    17521 atgagaaagc atgtgaagta attcatgctg ctgtagatga ttttttaaat ggaaatacag
    17581 atgaagtgat tttagttcat aatggttata aaaatatgat tacccaagaa cttaaaatta
    17641 atcatcttat tccagttgag ccaaagagta ttgaacagac tcataattct cttttagagc
    17701 ttgaaccgga agaaactgag cttttagaag atttaatgaa aacgtatttt gagtataata
    17761 tgtattatgc gttaatcgat tctttggcgg cagagcatag cgcaagaatg caagctatgg
    17821 ataatgcaac taataacgca aaggcaagag tgaaacaact aaatttagct tataacaaag
    17881 caagacaaga atccattact actgagctta tagagattat cagtggtgtt gaatcaatga
    17941 aatagtaaaa ttttaaggag aagataaata atgcaaggat ttatttcaca ggtattaggt
    18001 ccggttgttg atgtagattt taacgactat ttgcctcaaa ttaatgaagc aattgttgta
    18061 aattttgaaa gcgaaggaaa aaaacataaa cttgttttag aagtagcagc tcatttagga
    18121 gataatagag ttagaactat tgctatggat atgacagatg gtttggtaag gggcttaaaa
    18181 gctgaggctt taggtgctcc tattagtgtt cctgttggtg agaaagtttt aggaagaatt
    18241 ttcaatgtta ctggagattt gatcgatgaa ggtgaagaaa tttcttttga taaaaaatgg
    18301 gcaattcata gagatccacc agcttttgaa gatcaaagca caaaaagtga gatttttgaa
    18361 acagggatta aagttgtaga tttacttgct ccttatgcaa aaggtggtaa agtaggtctt
    18421 tttggtggtg caggtgttgg taaaactgtt attattatgg agcttattca caatgttgca
    18481 tttaagcata gcggctattc tgtatttgca ggtgtgggtg agagaactcg tgaaggaaat
    18541 gacctttata atgaaatgaa agaaagtaat gttttagaca aagttgctct atgttatgga
    18601 caaatgaatg aaccaccagg ggcaagaaat cgtattgctt taacaggttt aacaatggct
    18661 gagtatttta gagatgaaat gggtcttgat gtgcttatgt ttattgataa tatctttaga
    18721 ttttcacaat caggttctga aatgtcagca cttttaggaa gaattccatc agctgtgggt
    18781 tatcaaccaa ccttagcaag tgaaatgggt aaattccaag aaagaattac ttcaactaaa
    18841 aaaggctcaa tcacttcagt tcaagctgtt tacgttccag ctgatgactt aacagaccca
    18901 gctccagcaa ctgtttttgc tcacttagat gctacaacgg ttttaaatag agctattgct
    18961 gaaaaaggta tttatcctgc agttgaccca cttgactcaa cttcaagaat gcttgaccca
    19021 aatatcattg gagaagaaca ttataaagtt gctcgtggtg ttcaatcagt gcttcaaaaa
    19081 tacaaagatt tacaagatat catcgccatt ttaggtatgg atgagcttag cgaagaggat
    19141 aaacttgtag ttgaaagagc aagaaagatt gaaaaattct tatcacaacc atttttcgtt
    19201 gcagaagttt tcacaggtag cccaggaaaa tatataagcc ttgaagatac aatagcagga
    19261 tttaagggaa ttttagaagg taaatatgat catttaccag aaaatgcttt ctatatggtt
    19321 ggaaatatag atgaagctat tgcaaaagcg gataaattaa aaggttaatt tatgaacgat
    19381 ttgattaatt tcgagatagt tacgcctttg ggtgtaatct atcaaggaga agtaaaatct
    19441 gttactttac cgggtagtga aggagaattt ggcgtgctta aaggacatgc tgctttggtt
    19501 tcttctttaa aatctggagt aattgatatt gaaaaagctg atttaaacca tgaattaatt
    19561 gctattgatg ctggacatgc aaaggtagat gaagataaga tttgcgtgtt agcaaagggt
    19621 gcagtttggg tttgtggaag tgatgaaagt gagattgaaa aaaatcttgc tcaagcaaaa
    19681 gatttgatta aatctatgag ttctgataat gcagctttag cagcaacttt ttcaaaactt
    19741 gataatgtaa ggatgcatta atgaattttg aagctatatt ttattttttc aatagttcaa
    19801 gtattattac ttatatagtt ttattatggc tttctttata ttttatttta gcatttagta
    19861 ttttgtttgc tagattgact tatttggcta catggagaaa taaagaaaaa gaaagtttag
    19921 aaaatttgct cttgggtgag aaggatttaa gtcgtactga ttcgatttta agaaaatgca
    19981 atgatacaac ttcaaatcat ttagaaatct ataaaaattt agcaagtcgc cgcgcttctg
    20041 ctggacttac ttggcttagt attattgctt caacttcacc ttttataggt ctttttggga
    20101 cagttatttc tatacttgaa acttttggtg ggcttggaac tcaaaattct ttaagtatca
    20161 tagctcctaa aatcagcgag gctttagttg ctacaggttg tggtatttta gtagcaattc
    20221 ctgcttatac atttcacctc atcattaaaa gaaaagcttt cgaactttta agcattattg
    20281 atagcgagat taaagttata agttcgagta aataaggtta aaaatgccat ttgatgatga
    20341 aaaacctgag cttaatatca cacctttagt agatattatg cttgtattgc ttgcgatttt
    20401 aatggtaaca gctccaagca ttacttatga agaaaaaatt aatcttccac aaggtagtca
    20461 aaaaaatact agcgctccaa ctgttaagag tttaattatt agtattaatg caaaaaaaga
    20521 aattttttta aatcaagaaa aatacgattt tataagtttt gctgacaata ttgctcaaag
    20581 aaaagcacaa tttaataccg aagatccggt ttttatacgc gctgataaaa gcttaaaata
    20641 tgacgatgtt atttcagtct taagaagtgt aaaaaattta ggatttaata aagttgcttt
    20701 acagactgaa taatcatgaa aaattatggt ttgagtaatt taaattcgtt tttacttgct
    20761 ttagcaatat atattagtat agtaattctt gtttttttta gacttgtaag cgaggttgaa
    20821 cctgctatac aatatactga tataaaagat agttttgtag atattgaact tgctgaacca
    20881 tcaaaacaag ttattactca aagcaacact cctaaagaaa tacaaaaacc aacagagcaa
    20941 gttgatatag aaaagctttt tgctcagact acaaataaaa cagttaaaac agaagatatt
    21001 gaccaaaagg cgagtaattt taatgagctt tttggaaata tcaaagaaat acaagaagaa
    21061 aagactacaa aaattcaatc aagtgctaaa tcaggagctt ctagtgcccc aaaacctcaa
    21121 gcttctgaac ttgtaaaaca acttaatgat agcttgcttc aagaagaaag ttcaacacaa
    21181 ggtgaaagta caaaggcaca aaaaattgga atttatgatg aatttttagg gaaagtcgtg
    21241 cgtattatca ctcaaagatg gactcagtat tatccaaata gtgaaaaaat ttctgttaag
    21301 gtaaaaattt ttattgatga aaatggaaaa tttggctata cttcagttga aaaaagtggg
    21361 aatcctttat atgatgctaa agtggctgaa tttttagaaa gtcaaaaagg taaatttatt
    21421 acttatcctc cgcaaaataa aaatataagc attaccatga atttaagaga tgaagcaaaa
    21481 gttaaaaatg attaggagaa caaaatgaaa aaaattgtag caattttttt agtcttttta
    21541 ggaagtcttt gggcagaaga tccggttatt gatgttgtta attctggtgt ggttttacca
    21601 aagattatcg ttaaagataa ttcaaattta agtgatgaga atttaaagaa aagcttttat
    21661 aatatcattg tgaacgattt gaaagtaagt tcaaactttg aagttgttgc taatgcaact
    21721 gaaacaagta attatacttt tgaatacgct ttaaataaaa atggtaacac tttgagttta
    21781 aatgtaaaaa taaaagctgg cggttctgat aagtcagagc aaacttatac tttaaatggt
    21841 ttagagcaat atccattttt ggcacataaa agcgtcaaag cttctgtaaa tgcgttagga
    21901 cttgcacctg ttgattggat ggatcataaa attttgatcg cgagaaattc tagctctaaa
    21961 aaaagtcaaa ttattatggc tgattatact ttaacttatc aaaaagttat tgttgatggt
    22021 gggcttaatt tatttccaaa atggggaaat aaagaacaaa ctctatttta ttatacagct
    22081 tatgatcatg ataagccaac tttataccgt tatgatttaa ataccaataa agctagtaaa
    22141 attttatcaa gtggcggtat ggttgtagca agtgatgtga atgtagatgg aagtaaacta
    22201 cttgttacca tggctccaaa agatcagcct gatgtttatt tatatgactt aaataccaaa
    22261 aatctaacac aattaactaa ttattctggt attgatgtta atggaaattt tattggctca
    22321 gatgatagta aagtggtatt tgtaagcgat cgtttaggat atcctaatat ttttatgcaa
    22381 gatttaaata gcaatagtgc tgaacaagtt gtttttcatg gtagaaacaa ttcggctgtt
    22441 tcgacttata aagatttttt ggtttattca agtcgtgaac caaatcaagc aggtgttttt
    22501 aatatttatt tgatgtcaat taatagtgat tatattcgtc aacttacagc aaatggaaaa
    22561 aatttatttc caagattttc tagtgatggt ggaagtatag tatttatcaa atatttaggt
    22621 gcgcaaagtg ctttgggtgt tattcgtgta aatgcaaata agacttttta ttttcctctt
    22681 agggttggaa aaattcaatc aattgattgg taaaaatttc aattttaggt taaaattaat
    22741 taaaaattag atataataat aagaatttat taactttgaa aggtcataaa tgaaaaaaat
    22801 tctttttact tcaatcgcag ctcttgcagt tgttattagt ggttgtagca caaaaagcac
    22861 tagcgtaagc ggtgatagta gtgttgattc aaatcgtggt tcaggtggaa gtgatggttg
    22921 ggatattgat tcaaaaattt ctcaacttaa tgatacttta aataaagtat attttgattt
    22981 tgataaattc aacattcgtc ctgatatgca aaatgttgta agcacaaatg ctaatatttt
    23041 taacactgaa gtaagcggtg taagtattac tgttgaagga aactgcgatg agtggggaac
    23101 cgatgaatat aaccaagctc taggtttaaa aagagcaaaa gctgtaaaag aagctttaat
    23161 cgctaaaggt gtaaatgctg atagaattgc tgttaaaagc tatggagaaa caaatcctgt
    23221 gtgcactgaa aaaactaaag cttgcgatgc gcaaaataga cgtgctgaat ttaaattatc
    23281 aagataatta atgaaaaaaa tattcacagt agctcttctt ggagctactt tactttatgc
    23341 agaaagctca gcttttggtg caggagatat aacaagcaat tcttcttatg gtttaacttc
    23401 aaatgaaaaa ttatttaaag aaaagttaga taatttaaat aatgaaaata tacaaacaaa
    23461 tgctagaatt aatgaaatta acgaaagaat cgagggttta caaagcactt tagaaggtat
    23521 aaattctcaa tatgctaaat caaattctag attaagtcaa gttgaagaga ataatcaaaa
    23581 tattgaaaat aattttacta gtgaaattca aaaattaaag gcttatgttg aagaaagtag
    23641 aaaaattcaa gaagctaata ataagcaagt aaaaaaagtt ttagccgaac ttagttcttt
    23701 agtagatgct attaatgcaa attatgtttc taaaaacgaa ttaaatgatg caaatttaag
    23761 cgttaaaact attacaccta gtgttgttgt ttcaactaca gattcaaata gtaccattga
    23821 aaacaataat actcaaaata cccaagatga taaagcaaaa caaattgatg aatcttggaa
    23881 aaagaaaaaa aataatgaaa ttttagaatt agcgataaaa gatgttgata aaaatgcttt
    23941 tgaagattcc aaagcaaaat taaattttct cataacaaag cagtataaac ctgcaagagc
    24001 aaatttttgg ttaggggaga tcgagtataa acaaaaaaat tataacaatg ctattgttta
    24061 ttataaaaaa agttcttctt tgagtacaaa aggggattat ttcccaaaac ttttatatca
    24121 tactgccatt tcattggata aaacaggtga tacaaaaaca gcaaatggtt tttataaagc
    24181 tttaaaaact aattatccaa attcacccga agcaaaagct tcacctaata gaaaataatt
    24241 aaggagataa aatggctata gaaaaaaata gtgtagtttc aatgttttat gagttaaaag
    24301 atgcaaatac aaatgaagtt ttagaatcaa atttatattc tcaacctatt tcttttattt
    24361 taggcaaagg tcagatttta gaaagcttag aagaagaagt gatgaagctt gattgtccta
    24421 gcaatgctga tgtggtaatt aaaaaagaaa aaggtttagg tgaatacgat gaaaatgccg
    24481 ttcaaacttt accaaaagag caatttgcag gtattgattt aaaagtaggt atggagcttt
    24541 ttggcgaagg tgaaaatggc gaaaccgttc gtgtaactgt aaaagagatt ggcgaaaatg
    24601 atgtgacaat tgattataat catccttatg cgggtcgtga tttgcttttt tctttaaata
    24661 tcgtagatgc tagagctgca agtgaagatg aaattcttac aggtattatc gcaggaagtc
    24721 atagttgtgg ttgtggaagc ggacatgggc aggatcatca tcacggacac ggacatggtg
    24781 gcggcggttg ctgtggtggc ggcggttgcg gttgtcatta atgaagactg cgtttatatt
    24841 tccaggtcaa ggctcacaaa gtcttggcat gggaaaagat ttttatgaaa actctataaa
    24901 agccaaagaa ctccttcaaa acgcaagtga tttttgtaag attgatttta aacatttgct
    24961 ttttgaagaa aacgaaaaac tcaatcaaag tgaatttact caacccgcca tcgttttaaa
    25021 ttccttaatg gcttatagtg ttttacttga aaaaaaacct gatttaagtt cgaaatttgc
    25081 tttaggccat tctttgggag aattttcagc cttagctgtc aatggtgctt ttgatttttt
    25141 agaggctctt tctttggtta ataaaagagg gctttttatg caagaagatt gtgcaaaagt
    25201 tgaagcaggt atgatggtgg ttttggggct tgatgatgaa aaggttgaag agctttgtca
    25261 aaaagcacaa aaagaaaaca agcaaatttt cgctgcaaat tataactgcg atggacaaat
    25321 cgttgtagca ggtttaaaac ctgatttagc aagttatgaa agtgtattta aagaagcagg
    25381 agccaaaaga gctatgcttt taaatatgag cgtggcaagt cattgtcctc ttttggaaaa
    25441 tgcttcagct aagctttgtg tggagcttga aaaggtatta aaaccaaatt ttaaagccgt
    25501 gctttctaat gcaaatgcta aaatttatac atgtaaagaa gaagcccttg aacttttaaa
    25561 agcacaactt atctcacctg tgctttataa acaaagcatt aaggcatgtg aaaatgaagt
    25621 agattatttc atagaatttg gtgcaagcgt gcttaagggt ttgaataaaa aaatcacttc
    25681 aaaagaaact tatgctttaa caaatatgaa tgatattgat gaatttttaa aggttgtatg
    25741 atgaaaatag caattttagg agccatgagt gaagaaatca ctcctttact tgaaacactt
    25801 aaagattata cgaaaataga acacgctaac aatacttatt attttgcaaa gtataaaaac
    25861 catgaacttg ttttagcgta ttctaaaatt ggcaaggtaa attctactct tagtgctagt
    25921 gtgatgatag aaaaatttgg cgcacaagct ttgcttttta caggagttgc aggtgctttt
    25981 aatcctgaac ttgaaattgg cgatttgctt tatgcaacaa aattagctca atacgatctt
    26041 gatattactg cttttggaca tcctttgggt tttgttccag gtaatgaaat ttttatcaaa
    26101 accgatgaga aattaaacaa tcttgcttta gaagttgcta aggaattaaa tatcaaactg
    26161 cgtgcaggta ttattgcaac gggtgatgag tttatttgcg atgaagcaaa aaaagcaaaa
    26221 attagagaaa ttttcaatgc ggatgcttgt gaaatggaag gcgcaagtgt ggctttggtt
    26281 tgtgatgctt taaaggtgcc ttgttttatc ttaagagcta tgagtgataa agcaggggaa
    26341 aaggctgaat ttgattttga tgagtttgtg atcaattcag ctaaaatttc agccaatttt
    26401 gtgcttaaaa tgtgcgagaa attatgataa atcttagcaa aaaactcata cgccaagttg
    26461 cacaagctaa tgctaaattt ggacttatta aagatggaga tagggttctt ttagggctta
    26521 gtggcgggaa agattctttg gctttagccc atcttttaaa tcgtatgcaa gctcacgctc
    26581 cttttaaatt tgaacttgaa gcggtaactt tgagttatgg tatgggcgag gattattctc
    26641 atcttcatgc acattgtgaa gaacacggca ttaaacatag tgtgcttgat tcaaatattt
    26701 atgaagtttc aggcgatacc ataagagaaa attcaagttt ttgtagttat ttttcgagaa
    26761 tgcgtcgtgg agctttatat acttacgctc ttgaaaaagg ttttaacaag cttgctatag
    26821 cccatcattt agatgatgca gcagaaagct tttttatgaa ttttattcat aatggagctt
    26881 taagaacctt agcgcctatt tatcaaagca aacgcggtat aactgtgata cgccctttga
    26941 tttttgtgcg agaaagacag cttagggata atgctacgca aaatgaactt agcgtgatag
    27001 gaaatgaatt ttgtcctggt atgaaactca gcgaaaaaaa tgtaaaattt ccacacgcta
    27061 gagaagaagc taaacagctt ttagcaaatt tagaaaaaga tcatcctaag ttttttacaa
    27121 gcttaaaaac tgcttttgca aatttacaca cagaaagttt ttggctagaa aggacaaaaa
    27181 tatgaaaaaa gcttttgttt tagtggatta tcaaaatgat tttattgatg gaagtttagg
    27241 ttttgataag gctttaaaaa tcaaagaaaa tattcttaaa gccttaaatc aaatcgattt
    27301 taataacacg catttgcttt taacctatga tacgcatgat gaacattatc tacaaagcaa
    27361 agaaggttta aatttacctg taaaacattg tattaaagag agtttgggtt ggcaaatgcc
    27421 aaaggaattt gaaccttttt tacaaaaagc tcataaaatt ttttataaaa atacttttgg
    27481 tagcttagaa ttagctaatt tcatacaaaa aagtgattat gaagaacttc attttgcagg
    27541 gcttgtttct catatttgtg tgttttgtaa tattatttta gcttttggtg ctaaccctaa
    27601 tgcaaggata attttacacc aaaatttaag tgcaagtttt gatgaaaatt tagaaaaatc
    27661 cgcttttgat atacttaggg cttatggtat tgaaattgtt taatgcaagg ctttatactt
    27721 catactcaaa aagttaaaga tgaggatttg attgtttata ttttaagtcc taaaatgctt
    27781 attaaggctt atcgttttta tggacttaga cattctagta ttttaagcgg ctataaaatc
    27841 gactttgctt tagaagaaaa tcctagtttt ttaccaagac ttaaagatgt attgcatttg
    27901 ggatttttat ggattatgca aagggataaa atgcttattt ggcaagaatt tatccgtctt
    27961 ttatataggc acttaaaaga tgtagaagag cttgatagtt tttattttga tttacttcaa
    28021 gagtgtgtga aaaggtttga aaaacaaaat ccaaagcgtg ttattgttga tgcttattta
    28081 aaaattttgg aatttgaagg aagattgcat aaagattttt tttgttttgc ctgtgatgag
    28141 aaaattcaaa attccattac attgctaagg gcttttttac cttcgcattc tcaatgtgct
    28201 ttaggatttg agtttgaaga gaaaaaacta aaacaatttt atagtagtaa aaattgtgcg
    28261 atttttgatg atgaagaaat agaaaattta tatcatttga ttaaggaagg tttatgatat
    28321 taagtgatga aaaatgtgat tttttagaat ctatagcaag ttttttaagt cctaaagatg
    28381 tggagcttgt ctttgtggat agtaaagaaa tgcaagaaat taacttagag caaagaaaac
    28441 aagataaaac cactgatgta ctttcttttc cacttgaaaa tatcgatgag agtttgcctt
    28501 tgggttctgt tgtgatcaat gtggatttgg caaaagaaaa ggctaaagag ttagggcata
    28561 gctatgaaga agaaataagc ttgcttttta tccacgctat gcttcatttg ttaggttttg
    28621 atcatgaaaa tgataatgga gaaatgagag aaaaagagaa agaacttata gagcatttta
    28681 atttacctaa aagtttgatt gtaaggactt tggaagatta agtaagattt ttttcaaggg
    28741 ctagaagact tgcgctttat attttaaata tatgagtaaa aatattaaaa aaaatcattt
    28801 ttgccgattt gctttagaat aaaatttatt ccaaggtgat aaagatgata gtatttcctc
    28861 taagctcttt taatagatat tttggaaaca atcctttgca aacacttacc aaaataagag
    28921 atgaaagtat tgaaaatgga aatcccgagc ttacaaaaaa acaaagagaa gaattaggta
    28981 atgatttgat agatttgtat aagatttcta aaaaattcag cgataaaata gaattagtcg
    29041 agggttcaat agaagataag cttagaaaca atgaattacc agaatcagaa gttaaaaatt
    29101 tatttcaatg gatggatgaa aatgctaaac accctcgttg gatgcatatt gatggcgtga
    29161 gttatgatga agcttatgtt aaaatttttc acacaagcaa aagtatagat gaatttaaag
    29221 aaaaatatct tgagcttcaa aaaaaatatt ttgttgattt taacaatatt gattcatcgc
    29281 agaaaaaact gcaagaaact tcagaagaag acaaaaaagc tttcaaacct atacaagtag
    29341 aaagtaaaag cgaaacctac aaagatgata ataaaatgaa tgagctttta agaaaactac
    29401 tagaaactaa atttggcaca agcgatgagc tagaaattct ttttggtatg aattttagca
    29461 atgataatgc aggggaattt aataaaattc tttctcaaaa cacttcagca aaaattatag
    29521 atattaaggc ttaagatttt ttaaattata aaaatcaatc aagttaaact aaaaaattct
    29581 tctatttttt ttcgcatttc ttcgacattg tcgatacgat taacggtatc tctaaaggtt
    29641 gaagcgtctt tatgcccttt agaatactcg tgtaaatgct tgcgaaatat acttacgcct
    29701 tgatctttgt agtgttttat catttcatca aaatgagtga gtatgatttc ttttttgagt
    29761 ttttcatcta cacttttacc gcttttgatt tcataaaata tccaaggatt tcctacgctt
    29821 gcacgcccta tcatgagtcc atcacatttt gtgattttat aaacttcttt agcgttttgt
    29881 gcgttaatat cgccatttgc aatcacagga attttcacgc tcgctttagc actagcaatg
    29941 gatccataat cggcttttcc gctataaagc tgttttcttg tgcgtccgtg gatacttata
    30001 aaatccaccc ccaagctttc acaaatttta gccatttttt caggatattt ttcattaaat
    30061 cctagtcgaa atttcacact tgtaaggctt tttttattgt tttctttaat cactcctaca
    30121 agatttttaa aaagctctaa attttctagc aaagcactgc cagcacattg tttaacaact
    30181 ttatttacag ggcaaccgca attaaaatcg atcccatcta caaaatccat ttcatttagc
    30241 atttgcactg ctttttttag cacttcttta tctccacctg caatttggac tatataagga
    30301 ttttctaatt cagctctttc tagcatatgt aaagttttag aactttcata aactaaggca
    30361 ttagaactta tcatttcact tatggtaata tcagcaccaa atttttttac tacattacga
    30421 aaaggcagat ctgaaaaacc tgccataggg gctaaaaaca ggggtttttt gctaaaatct
    30481 atcattgtat gagttgattt agatcgattt tgatattttt ttcacgcaag gctaaaaagg
    30541 ctttaaaatc attaaatttt ttatcatcat tgtgaatttg ttctcttaac tcatctaaaa
    30601 gtccaaattc agccaaaaga tataaatatg ctcttaaagc ttcgcttttt tcatttttaa
    30661 ttttgttaaa aattcctaaa atagcatcag gatttaaaag tttagtactt agttttgctg
    30721 cgttaagata gtctttttcg cttaatatgt tgtgtgaaag taaaacttca tattctgcta
    30781 cactaagttc taaatttcct tctttaaaac gcttgataag tgtgagaact tcagaaggct
    30841 ttttagggat ttttacattt ttaatttgct cataactagc tttttctata agagtgttaa
    30901 aagcaatttc ttcaaattca tctttgattt cattaaggtt tttaagtttg ttataggcat
    30961 aatttgcatc atttttgaga tgattttttt cattttgcaa atataaaaca ttgttatttt
    31021 cgagtttaaa tttgctaagg ttaaaaaatt cgtttttatt taaaccatca ataagatcta
    31081 aaatttcatt gattttattt gagtgtggaa ttttttcatg tgtttttatg gttttaaaaa
    31141 gttgtgctac agatctaaat tcttttgttt gaaaagtggt tttaagatct ttttcaagga
    31201 gtaaatcttg agtataagct tcaaatttag ctgcatcttt aaaaaaatgc ttaaatttta
    31261 aataacgcaa aaatccataa aatgctatgt gtaaaacggc taaaatcata taaataaata
    31321 aaggaataac aagccatatc ataataggta gttcaaaggt ataagtgctg atatttagag
    31381 tatagcttcc tagttctaga tgccaagcaa aggcaaaaat aagtgctata taaataaaac
    31441 ttgcaagtaa gaagagttta attttcatgt ttttttcctt gttctgcaat ttgacggcaa
    31501 gtgatacaat atcttgcgtg aggtttgact tttagtcttt gagagtcgat ttcatcatcg
    31561 caagattcgc aaattccata agtgccgttt ttgattttat ctaaagaatc ttcgatttct
    31621 ataagttctt ctttgagatt ggtgctgata gcaaagtcaa tttgagagcc tgtttctatg
    31681 acagaaaaat ctacactatc gcttgggacg ctattatgaa gagcttcgat ttcatttgaa
    31741 ttgctttgca aattttctaa gatggctttt tttctttctt ctaaaatatt tttgaaattt
    31801 tgtatttcat tttttttcat tttaaaactt tctatttgtg ataagggtga ttgttgttga
    31861 tgcaaaatgc acgataaatt tgttctaaaa gtaaggtttt aacaaattga tgtgctaaag
    31921 taagtttgct taatgatagt ctaaaatcca aactttgatt aaattcttct cttaaaccat
    31981 aagcacctcc tataaaaaaa cttaattcat ttttatcttg gatgagtttt gcaaattcta
    32041 tacttgtaag atctttccct ttttcatcaa gagcgataca atagcctttt ttataaggca
    32101 taaaagcttc ttcatagctt ttttttgctt ctatggcatt taaattttga gctaaggcta
    32161 tttttttatt aaaaacattt atttctttta aagtggcgta tttggagatg agtttagagt
    32221 atttctcact acaagtttta aattcatcac ttttttgaat acaaaagata ttaacttgca
    32281 aattattttc cactaaaaaa ttttagtaca tcgctaagat attgtttttg ttctcctctt
    32341 tcaactatgg catctataag tccatgttct aacaagaact ctgctttttg aaaaccttca
    32401 ggtaaatctg ctcctatagt ttgtttaata actcttgcgc cagcaaaacc tactaaagct
    32461 tcaggttcag cgatgattaa atctccaagc caagcaaaag aagcacttac tccacccata
    32521 gtaggatcgg ttaaaatgct aatataagga agtttttctt tgctaagaag tttaagtgca
    32581 gcactagttt tgctcatttg catcaaagaa taagtacttt cttgcattct agctccaccg
    32641 cttgcactta cgatgacaag agaagttttg cttgtgatag ctctttgtat agctctaaca
    32701 attttttctc cttcaacaga acctaaagat ccgcccataa aagaaaaatc aaatacaaca
    32761 agttgggttt ttaaaccatt gatttcacat tctccactga tgacagaact ttttctacct
    32821 gttttacttt caccttcgct aaggcgtttt ttataggatt tgctatcaac aaattttaaa
    32881 ggatctatag cttctaaatt tgcatcatac tcaataaaac tgccttcatc gcttaaaagt
    32941 ttaatacgtt catcagctga aattctcatg tgataattgc atttaggaca aacattaaaa
    33001 caagattcta tttctttata atacatcaaa gcatgacaac tttggcactt tacccagtga
    33061 tttggcgctt ctttaacgct aggttgttgt cttcttattt ttgaaaaaat atctgcaaaa
    33121 ttcatatatt cacctaatta ttttttaaaa attctaagat tatatcaaaa atttttttgt
    33181 cttggcttag gagaaggaaa ttttcatttt tttctatata taaattttga tgaattgcta
    33241 aagcagctgc tgtatcaaaa attcgtgttt ttccaagaat taatacaaaa ctaaaatacg
    33301 aagcataagc aagacttaag gctgttgcac ccaaagagcg aaattttaat tgattttttg
    33361 ttaaaaaatc gagaagttct ggataaagtg aaattttttc aactatacct attttagaaa
    33421 atagattagg tgttaagggt gagtattttg gatcggaaag attggattta aaagcttgtt
    33481 tgttattaaa agcaaaaatt tcttgactga caagattgca aacaaaagca ctttttgcct
    33541 gatctttttc cataagagct atagaagttc cataaaatgg tattttagaa acaaaatttg
    33601 aacttccatc caaaggatca agaatcattt gttttgggct agcttttccg atcaatccgc
    33661 tttcttcaga aaaaatttgt ccaaaacaac taagatattt tatgaaaatt tgttcacatt
    33721 ttaagtcaag ctcatagcct tgatttttat catagcctaa tttagagcaa agtttaagat
    33781 cattttgtgg gatattgttt agatacttgc gtatttgcaa atttgcattc aagcaagcat
    33841 ctaaaaattc tttcattaaa agcgtgttcc aagattaaat tcaaaactat tagtatcatc
    33901 acctttttta tcattaagag gtttggcaaa tacaagttgt aaaggtccaa taggtgtaat
    33961 ccattcaatg cctatacctg tactcattct ttttatttca tctaaatttt tacgccctat
    34021 cataccataa tcaaaaaaca cgctaccacg aagtttgatt ctatcaatca aaggaaaact
    34081 aagttctacg gaattggcaa aagctatggt tccgcctatt tcatctcccc attgattttt
    34141 aggacttact gttctgcttt caaaaccgcg tatcgatcta ataccaccta aataaattct
    34201 ttggttaatt ggtaaataac cttcatccca tactttataa aaactcgctt tatagcgata
    34261 aataagatca tatcctatat agtcttgcaa accttgataa aagttaaatt tagagcttga
    34321 tgaaataaat tcttgatctc cgccaagtcc agcgtattct aaactagttg aagcaataat
    34381 acctgatcgt ggcagataat aatcatctgt atcgttaaag gtgattgctg gagttataga
    34441 gcttttaata cttttgccaa gttcatatcc tgttcttaaa agagttggac ttaagtgata
    34501 tatatcgctt tgttcaagat tataagttaa gcttacatta tagtatcttg caaattggcg
    34561 tccaattgtt atatcaaagc cgtaattttt ttctgaataa ttatcccatt catagtcatt
    34621 tgaataaagt gttccaccca gactatattg actatcaaga acgcgtggat ttacgagact
    34681 aatccttccc gataaagtat catcgctttt atctacgctt acagagcttt ttattcctga
    34741 accaaagata tttgtatccg ataaagaagc gttaagcaaa ataccatcgc ttgatccata
    34801 gccaatgcct ccagaaatag ctcctgtaga agcttcttta acatcaacaa tcaaatcaat
    34861 atgtgtatca tcaacttttt cttctttgat atttacatcg tcaaaataag aagttctttt
    34921 taaagcattt tttgactcgc ttaagtctgt tctattgtat aaattacctt ctgttatata
    34981 taattctcgg cgtatgacgc gatctacggt gcgtgaattt cctgaaataa taacatttct
    35041 tatataaact ttatcgtgag ggattacttt aaatacaacg gtggcttctt gagtttgatc
    35101 atttttttga atatcaggat agacttctac aaacgcataa cccaaatcag cactttgtgt
    35161 ttctatggtt ttaacatctt ttctaatgtc ttcgatattg atagttttgc cagcgcttga
    35221 tcttaaatct tttacggttt gtgcattttg cttatcatca aataaaggat tttctatgct
    35281 tatactttta attttataag gctttccttc tttgataaaa taagtcaaat ttgcttgata
    35341 agtatctgtg taggttttaa gataagggga ggatacttga acatctaaat atcctttttt
    35401 catatattca tcagcaattc ttgaactatc gttactaagt tcaaaaactt ttaattttcc
    35461 atcattgcgt ccccacatcc atcccataaa ttctttttct ttgttaacaa cagcaggttc
    35521 tatatcagaa tatgaaaatt tctttgctcc acttaaatga acattatcaa taatgatatt
    35581 ttcaccacga tttactataa attcaagctc tagtccatca gtattttcta aagtcttttt
    35641 tttgtattct acaatagtat caaaataact ttttgcttca taataagctt taatgcgttc
    35701 aatagcttct tttatatttc cttcatcaag tagtgtacct cttttaatcc ctaaaatact
    35761 ttcaacttgt tttctatcat ttgaagctat acctgtgata gtaacctttg ctatagttgg
    35821 tttttcagta actataattt ccaaaattcc attgttgttt tctactgcaa tattttcgaa
    35881 ataattttgt ttataaagat taagaatagc agtgttgatt tttgcaggat ttatttcctc
    35941 gcctatttta agccccgcga tatttatagc gcttgtgttc gataaatgat ttaatccgat
    36001 aaatttaata tctttaatgg ttgctgcatt ggccatagca actaaagcac aaatactaat
    36061 aagatgtttt ttcattgatt ttttacctaa agctttatta aaagctgtat aatagcaaaa
    36121 aaaatttaac aaaaaaacta aggtagaaag tatgaaaata gcaattatag ggcttgggct
    36181 tatgggtgga tctttagggc tttgtttgaa agaaaataag cttatttctt gtgtttatgg
    36241 tatggattta agcaaagaaa atgaaaaaga tgccctgcaa ttaggtctta ttcatgagct
    36301 tatagaattt aaagatttag ctttatgtga tatgattttt gtcgcaactc ctgttgatgc
    36361 tattatagaa attttgcaaa agttagttga tttgccttct aatgtaacaa ttatagagct
    36421 tggaagtaca aaaagaaaaa ttatagaaag tttgcctaag aatttaatca aacaaactct
    36481 ttttgctcat cctatgacag gaactgaaaa ttcaggtcca aaagcagctt ttaaagagct
    36541 ttataaagat gcagtttgtg ttctttgtga tagtgaaata gctgatgatt tacatcaaaa
    36601 aagagcggta gaaatttttt ctcatttagg gatgaaaatt gtttttatgg atagtaaagc
    36661 ccatgatcat catgctgcta ttatttctca tttgcctcat gttataagtt tttctttggc
    36721 aaattttgta atgaaggaag aagataaaag aaatattgtt catttagccg gaggatcttt
    36781 taaaggtatg agcagaattg ccaaatcatc gccacaaatg tgggaaagta tttttttaca
    36841 aaataaagat aacttattaa gttctattga tttttttcaa caagaattag agagatgtaa
    36901 acaaatgata caattagaca aaaacgatga attaagagaa tggatgaaac aggctaatac
    36961 cctaagagaa attttataaa tttgctagat atttactgaa aatataatag aatttatatt
    37021 aaaagcaaca aaaacattga aaatttttaa ggaaggttat ggcaaaaaga aaaggcaaaa
    37081 cttatttatc tgttttaatt ttagttttaa tagcaatttt gatttttttt atttcaagat
    37141 taagtatttt tgaaaaaaat cctcctcaaa ttttaatgcc agatgttgta tatactgatc
    37201 ttaaaaaacc tattttagtg catattaaag atgatgaaag ttctatcaaa aacgtacaaa
    37261 ttatattgca taaagacgac aatactagtg caatggttat agcagatgaa aagatttcta
    37321 atttaaaaga tattacctta caagttgctt tgccaaaatt tggttacaaa gaaaatgtaa
    37381 aatcttttgt tttggaggtg atagctaaag attctagttt ttggaatttt tttagtggca
    37441 atgaagcaag aaaacaaatt gcggtattag tagataatac ggctccaaaa atcaatatca
    37501 taagcaattc ttaccaaatc gagcaaggtg gtgctggggc agttgttttt aaggctgatg
    37561 atgctaattt agataaggtg tatatagaaa caaataaagg taaaatcttt aaagccacac
    37621 cttatgtaaa agaaggatat tatgcggctt tgattgcttg ggatgcaaga gatgaggaat
    37681 ttcgtgcatt tgttatcgct acggataaag cgggcaatat ttcaaaagaa cgtataaggt
    37741 attattttgt taatcgtaaa tatcgtgttt caaatatcaa tctaacggat aaatttttag
    37801 atggaaagat tgagaattta gcaaatcagt acgctccaaa agataataat ctcaatcgtt
    37861 atgaaaaatt taagtttgtc aatgaaactt taagaaatag caatgaaaaa cttatccatg
    37921 aaatcacttc aaaagtacct gaggaaaaaa ttgataattt tgatttgaat ttatttttac
    37981 ctcttaaaaa tggtatgaaa gtagcggatt ttgctgatca taggtattat tcttataatg
    38041 ggcaatttgt gagtgattct tatcatatgg ggcttgatct agcaagcgta gcacaagctc
    38101 ctatcataag taataacgca ggcaaggttg tttttgctgc tgaaaatgga atttatggtt
    38161 taaatttaat tgtttatcat ggttttggag tgtatagtct ttatgggcac tgttcttcta
    38221 aaaatgttga tttagatgaa atgattaata aacaaagcat tataggcaaa acaggaacaa
    38281 gtggtttagc cttaggcgat catttgcatt ttggagtttt ggttcaaggg gttgaaacgc
    38341 gtcctgaaca atggcaagat aaaaaatgga tagaaaataa tatttacaat gttttaaatg
    38401 atggtaaaaa gataatttta ggaaaaaatt aatgaaacaa ttaactttag caaaaactgt
    38461 caaaggcgta ggtataggac ttcataaggg tgaacccata gaaattactt tagagccttt
    38521 agaagcaaat agtggtatag tattttttag aagtgatctt aatgcaagct ataaggcaag
    38581 tcctgaaaat gtgatcaata ctcaaatggc aactgtttta ggagatgaaa gagggtttat
    38641 ttctacaata gagcatttaa tgagtgcgat taatgcttat ggaatcgata atgtacgcat
    38701 agttttaaat gcaaatgaag ctcctgttat ggatggatca agtattagtt tttgtatgat
    38761 gcttgatgaa gcaggggtaa aagaacttga tgcgcctaaa aaaattatgg taattaaaaa
    38821 gcctatagaa gtaagagatg gtaataaatt tgtgcgttta actcctacta aagaaccccg
    38881 tattaattac acaattaaat ttgacaatgc tgttataggt gaacaaagtt acaattttga
    38941 attcagcaaa aaaaattata tagaaaacat agcaagagct agaacttttg gttttttaaa
    39001 agatgttcaa gctcttagga gtatgaattt agcactaggt ggaagtttag aaaatactat
    39061 agtggtagat gaaaatcgta ttttaaatcc tgaaggtttg cgtttcaaag atgagtttgt
    39121 aagacataaa attttagatg caattggaga tttaacctta cttggatatc gtgtttttgg
    39181 ggattatact tcatatgctg ggagccatca tttaaatcat ttacttacta aagaagtttt
    39241 aaaagataaa gatgcttatg aaattgtaag ccttgaaaaa acaacccaaa aagcttatga
    39301 aaaggtattt gcataaaaac ttctctttta cttaatactt tatctaagcc tttaatgatc
    39361 ggaatttatc aagataataa acttataaaa acttataaaa gtgaagaaaa agcaagcgaa
    39421 tttttaccaa aaattttaga tgaattgctt aaagagtatg attttacaag tttaatctat
    39481 gctaatggtc caggttctta tatggggatt aaaatttctt atgtaagttt gagtacttta
    39541 agtatagtaa aaaatattcc tttatttgcg gtgagtgctt ttgaattaaa tggctataaa
    39601 cccataagtg caaataaaaa tttttgtttt gtatataagg aaggtgaaat ttgtttagag
    39661 caaaatatcc cagcagagtt ttttttacca aaaaatttac aagagcttaa actaaataat
    39721 gataatcttc ccttttattt tttagatgca atttaggatg aaatttgaaa attttagttc
    39781 cagctacgag tgcgaattta gggccaggtt ttgattgttt aggacttagt ttaaagcttt
    39841 ttaatgaaac tcaaatccaa aaatcaggtg tttttagcat tagtattgga ggcgagggaa
    39901 gtgataatat ttttcttaaa aaaaacaata tatttgtaaa tattttttat gaaatttatg
    39961 aaaaactaag cggaaaaaaa gataattttc gttttatttt tcaaaataac attcctcttt
    40021 caagaggatt aggaagctct tcagctgtga ttgttggagc tattgccagt gcttattata
    40081 tgagtggatt taaggtagaa aaagaacgta ttttagatga agctttaatt tatgaaaacc
    40141 atccagataa tatcgctcca gctactcttg gtggttttgt gtgttctttg gttgaaaaaa
    40201 ataaagttta tagtatcaaa aaagagattg ataaagattt agctgctgtg gttgtgatcc
    40261 caaatttggc aatgagcacg gaacaatcac gccaagcttt ggccaaaaat ttaagtttta
    40321 atgatgcggt tttcaacctt tctcatgctt catttttaac cgcttgtttt ttggagaaaa
    40381 aatatgaatt tttaaaattt gcaagtcaag ataagctcca tgaaatcaat cgtatgaaaa
    40441 acttacccga gctttttgaa gtgcaaaaat ttgccttaga aaataaagct ttaatgagca
    40501 cactttcagg ttcgggatcg agcttttttt ctttagcttt taaagatgac gctttagctt
    40561 tggcaaagaa aatacaaaca aaatttaaag attttcgtgt gcaatattta gaatttgatg
    40621 ataatggctt tgaaatttgc taaaaaatat aaaaaaaaga tataattttg aaaaaacata
    40681 taccaattag aatgtgcata gtgtgtaaaa accgctttga gcaaaatatg ttatttagat
    40741 ttaaagttgt tttaggagat attgtgccta aagcagaaca tggaagaagc ggatatttat
    40801 gtcaaaattg tattgagaga gaagataaag tcttacaaaa agcattttct aaaatatgta
    40861 aaaatttaaa tactaaaatt actcagcaag gacttaagga gatattttta aatggcaaag
    40921 attagaattc atgaaatcgc aaaagaatta ggttatgata gtaaggaaat tattgaaaag
    40981 gcaaatgaat taggacttgg aattaaaaca gcatcaaatg ctgtagaacc tgagattgcg
    41041 gcagctattt atgagtatat acaaacaaga gaaattccag aagcttttaa gaaaaatatc
    41101 aaaactccta cggcaaaaaa gcctaaaaaa gaaaatataa aagaacaaga aaagctaaat
    41161 gaatctgaaa aaaaagaacc taaaaaagaa gaaaagctta aacaagaagt taaaaaagaa
    41221 gaattaaaaa ttgaaaaaga aaatgcaaaa gaggaagaaa aacaagaaat tattgatgct
    41281 cataagccac aaagccttgc tagtgcaact ttagccaaaa gacgcggact tgttattgtt
    41341 aaaaagaaaa aagacgaaga agaaattcaa gttaaaaaag aagaagtaaa aaattcaaat
    41401 gatatatcta tcaataatga agagcgctta agtttaaaaa ctatgttttc aaatgctgat
    41461 gagagtttaa agaaaaagaa aaaagaaaaa aaatcttttg ttgcgagtaa aaaagaaagt
    41521 accgaaaaaa tgaatttttt agatgaacat gattttggtg atatttcttt agatgatgaa
    41581 gatgaggtag tattacctga ttttagtgta aaagaacaag aaaaaccaca aaatatcaat
    41641 aaaaaacaac ctaattttat aagacaagct gttggaaatt ctgcgggttt tgggcttgaa
    41701 ggtggaattc aaagaagaag tcgtaaaaaa ccatctaaaa agattgaaaa aaaggaagta
    41761 gaagaagtag gtagcgttgc tatttctaaa gaaattcgtg tgtatgaatt cgctgataag
    41821 ataggaaaaa gcactagtga agtgatttca aaacttttca tgcttggaat gatgacaaca
    41881 aaaaatgatt tcttagatga agatgcgatt gaaattttgg ctgctgaatt tggtatagag
    41941 atcaatatca ttaacgaggc tgatgagttt gattatgtaa aagactatga agaagagact
    42001 gatgaaaaag atttagtgac tagagcacct gtgattacca tcatggggca tgttgatcat
    42061 ggtaaaactt ctttgttaga ttatattaga aaatcacgcg ttgcaagtgg tgaagcaggg
    42121 ggtattactc agcacgtggg tgcttatatg gtagaaaaaa atggacgtaa aattactttt
    42181 attgatactc caggtcacga agcttttact gctatgcgtg caaggggtgc aagtatcact
    42241 gatattgtaa tcatcgttgt agccgcagat gatggggtaa aaccacaaac taaagaagcg
    42301 ataaatcatg ctaaagcagc aggtgtgcct attattattg ctattaataa aatggataaa
    42361 gaagcagcaa atcccgatat ggtaaaaact caactcgcag aaatggaaat catgccagta
    42421 gaatggggcg gatcttatga atttgtaggg gtttcggcta aaacaggaat ggggattgaa
    42481 gatttgcttg aaatcgtgct tttacaagct gatattttag aacttaaagc caatccaaaa
    42541 agttttgcta aagcaagcat tatagaaagt tctgtgcaaa aagggcgtgg tgcggtggct
    42601 actatcatcg tgcaaaatgg aacacttact gtaggaagta ccgtggttgc aggcgaggct
    42661 tatggaaaag tgcgtgcgat gagcgatgat caaggtaaag ccttaaaaga aattaaacca
    42721 ggcgaatgtg gggttatcgt agggcttagt gaagtagcag atgcaggtga aattttaatc
    42781 gtagtaaaaa ccgataaaga agcaagagaa tatgctaata aacgccacga atacaatcgc
    42841 caaaaagaac ttagcaaatc cactaaagtt agcattgatg agcttggagc taagatcaaa
    42901 gaaggtaatc taaaagcctt gcctgttatt ttaaaagctg atgtgcaagg atctttagaa
    42961 gccttaaagg caagtttaga aaaacttaga aatgatgaga ttaaagtgaa tatcattcat
    43021 agtggagtag gaggaatcac gcaaagtgat atagagcttg caagtgcgag tgaaaactct
    43081 atagtactag gttttaacat acgcccaaca ggggaagtta aagagcgttc taaagataaa
    43141 ggcgtagaaa ttaaaactta taatgtgatt tataatcttt tagatgatgt aaaagccttg
    43201 cttggtggta tgatgagtcc gattatttct gaagagcaat taggacaagc agagattaga
    43261 caagtgatca atgtgccaaa aatcggacaa attgcaggtt gtatggtaac cgaaggggtg
    43321 attaaccgtg gggctaaaat tcgccttatc cgtgatggag ttgtggttta tgagggaaat
    43381 gtaagctcac ttaaacgctt taaagatgat gctaaagaag tggcaaaagg ctatgaatgt
    43441 ggcgtaggta tagaagggtg cgatgatatg agagtgggtg attatataga aagctataaa
    43501 gaagtagagg aacaagcaag tctatgaacc caagtgagat taaaaaacta cgcactgaaa
    43561 gtatcttaaa agagctgatc cctgaagctt tagcaaattt agatgatgaa aatttgaaaa
    43621 atttgtgtgt agtggatgta gagtgtaaaa aaggcagata cgatgctttt gtgtatcttg
    43681 ataaaatgtt ttttaatgtt catgagcaag aaaaaatttt atcttcttta aaaaaggcaa
    43741 gtagagcttt gcaaaattat tgcatgagcg agcagggctg gtataggtgt ccgaattttc
    43801 attttaaatt tgatgatagg cttgagtatc aaaaccatat ggacgcactt tttgaaaaaa
    43861 taaaaaagga taaaaatgaa tcttgaagcc ctttgcaaag aagcagaact tagcttttat
    43921 gatgatgagc tagtaagtga aaatggtaaa aaaatttata gaatttatgt gcaaaaagaa
    43981 ggcggggtaa atcttgatga ttgtgcaaag cttagtgaaa ttttatcgcc tatttttgat
    44041 gtagaaccac ctgtaaatgg ggagtatttt ttagaagtat cttcaccagg acttgaaaga
    44101 aaactgagta agatagaaca ttttgcaaaa agtataggtg aacttgcgaa gatcacaacc
    44161 aatgaaaaag aaaaaatcga agcaaaaatc attgctgtag atgatgaaaa tatcacttta
    44221 gaaaatttag aaaataaaga aaaaactact ataaatttta atgatataaa aaaagctaga
    44281 accttcatac aatggtaaaa att
//
LOCUS       DAPIWB010000005        38198 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.005, whole genome shotgun sequence.
ACCESSION   DAPIWB010000005 DAPIWB010000000
VERSION     DAPIWB010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 38198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38198
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.005"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..193)
                     /locus_tag="RJ266_000211"
     CDS             complement(<1..193)
                     /locus_tag="RJ266_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HDV7353996.1"
                     /translation="MIYENDLIYIEKEEAQVPWLKIFTKEIYKEFSDCPLELQKELFE
                     KILLCEKAMIEFYKPEKINI"
     gene            300..1004
                     /locus_tag="RJ266_000212"
     CDS             300..1004
                     /locus_tag="RJ266_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7353997.1"
                     /translation="MQISSSYNSYDYYSSKPSFDKTNQSDSTQKDEKNLSENKDDKEK
                     NGEQTQMVNGVELSQKEVAQVRELQSIDRNVKAHEAAHQAAGGGLAGAASFTYTRGPD
                     NQMYATAGEVPISMQKGNTPEETIANARQIAAAAMAPADPSPQDYKVAANATKMEFEA
                     RAEAMKLKAEEVKEKEEENKEKDDKNSENSLEKTDKDSKNNDKNSNFDKDFKNLVART
                     YQQNSQNNGIKFSIAS"
     gene            complement(1110..1885)
                     /locus_tag="RJ266_000213"
                     /pseudo
     CDS             complement(1110..1885)
                     /locus_tag="RJ266_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867793.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2084..3805)
                     /locus_tag="RJ266_000214"
     CDS             complement(2084..3805)
                     /locus_tag="RJ266_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HDV7353998.1"
                     /translation="MAEVLKKVDVVTVGAGWTGGIVAAELTKAGLNVLSLERGHMQST
                     ENFNFIHDEWRYGINYGLMQDCSKDTVTFRHDPSGLALPYRKMGSFLLGNNVGGAGVH
                     WNGWTFRFMPYDFEIQTLSKQRYGNKLGNDYTLQDWGVTYKDMEPYYDRFEKTCGVSG
                     EPNPLAEKMGAFRSSPYPQEPLENTKMLKRFESAAKSSNLHTYRLPASNSKGGYTNPD
                     GQDLAPCQYCAYCERFGCEYGAKASPLNTVIPKAMSTGKYTIRTYSNVTQILKKDGKV
                     TGVKFVDTRTMKEYIQPADIVVLTSYMFNNAKLLMVSNIGEQYDPKTGKGTLGRNYCY
                     QMNMGTTAFFDEQFNTFMGSGALGTTSDDFNGDNFDHSKEKFLHGAMIYSVQLGTRPI
                     QSAPLPAGAPTWGAEFKKALNYNFTRAITVAGQGASLPHKNNYLSLDPTYKDAFGMPL
                     LRLTYNFTDQDRALHKFITDKTAEVAKRMQGVKSIKKGAYLKDYSVVPYQSTHNTGGT
                     TMGADRETSVVNTYLQHWDADNLFVVGAGNFQHNSGYNPTDTVGALAYRCAEGILKYH
                     KSGKSLA"
     gene            complement(3807..4535)
                     /locus_tag="RJ266_000215"
     CDS             complement(3807..4535)
                     /locus_tag="RJ266_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HDV7353999.1"
                     /translation="MQDNIIDRRSFFKLGLLGGSVVAASTIGGGAVLKAAELTHSHQA
                     SQGKSNKVRGRMFFQTQTEFDTLSAACERIYPKDEQGEGAIGLGVPYFIDNQLASAYG
                     YNDREYMQGPFMEGKAEQGYQTPMQRKDIFLEGVHALEENAQKRYKKSFSLLKGGDQD
                     KILSDFEKGKIQTTGFKSSYFFTLLRDMTVAGVLADPIYGGNDNKNGWRMMQYPGAQM
                     SYVDKIASDEFFNIEPMSLADMES"
     gene            complement(4671..5375)
                     /locus_tag="RJ266_000216"
     CDS             complement(4671..5375)
                     /locus_tag="RJ266_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HDV7354000.1"
                     /translation="MRIFLALFLFFNSLFALSELEEGLKLYEANKFDKAYEIFKNLCE
                     KDISKACFSLAFMHESAKGVSKDLNQAYKFYDKACKLGLASACSNMALLLQNQGYKNE
                     ALLAFNKACTLGESLSCNNIALFYEKEKDGQMASSFYKRSCDLKNARACYQLGSLYDK
                     GELVKASVKSALAFYSKSCTLGFGESCYLLGRYNQLEKQDLIKAKRYFGMACDQKYQE
                     ACAAYKELNSKDIELY"
     gene            complement(5375..7204)
                     /locus_tag="RJ266_000217"
     CDS             complement(5375..7204)
                     /locus_tag="RJ266_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HDV7354001.1"
                     /translation="MQINLLNDFIKAYENTYSVSFDDSFKGRIQELCKELNEPFMHAS
                     YALENELKELVFSLDKNVNIAIIGQFSSGKSSLLNLILRCDCLPTGVVPVTFKPTFLR
                     YAKEYFLRVEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTP
                     GLNANENDTLTTLDELKNIHGAIWLSLIDNAGKKSEEDAIKANLELLGENSICVLNQK
                     DKLNTEELDNVLNYAKSVFLKYFDELITISCKEAKDEQSYEKSNFQSLLDFLTQLDTT
                     ALKEKFVKRKILNLCEILEDENQLFVSIFDHLLNQFQSYEKHLLLAYENFLKEIEILN
                     HQILEQLKSISERISSEIFANVKEKDAFFYKESKGFLKKDLYTRYDYKVPYISSDDAF
                     LAMFYNSDVMSKEFKKIKNELYKSFEEIKMKLKDFINMLEREILLFKAEFSNIQKDHI
                     FQSDKNFSELRAFCNASDEYFLKDFKELLFKSILELDLFFEKLNLKAFTNYENATKLS
                     LAFFSRKINESRVLYELDSSEFVLFYPKKSEIYERVLNELNVYEFEALLINKPILTKI
                     AKNFLEQSQNLIQEKNKFLDLKKAELQKRRVQILNVRESIKED"
     gene            complement(7194..9380)
                     /locus_tag="RJ266_000218"
     CDS             complement(7194..9380)
                     /locus_tag="RJ266_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HDV7354002.1"
                     /translation="MKELFQKVWQNELQFLNFDAKFQDKSKLDTAECAIILSVNKDNY
                     ERYFLLKEFQELCKKIDLRVDIFSIQNAQICILNLFKSGFVPKQDLLKALKILEKISK
                     NTEIFDFISQEKVQSIDQKALFQNDFKELNAINLELQKLSFDENLKSRLQKTLEKFQN
                     LEFNIAITGVMNAGKSSLLNALLKEDFLGVSNIPETANLTVLSYGKSEEAKIYFWDRK
                     EWQNILESSHFNADLKEFIDKLDKSVNIEDFIKDKPLIQNIALCELKNFSSAKNKISA
                     LIKKIEIKSHLEFLKNNISIVDTPGLDDVVVQREIVTNEYLKESDFLIHLMNASQSLT
                     QKDADFLVHCLLNSRLSKFLIVLTKVDLLSKKDLEEVIVYTKESLKSRLVDLDENLVE
                     KIDFLCVSAKMASDFYKGLASKESLQKSGMQEFENYLFNELYAGEKSKIALRAYKKEL
                     HLELKNILSEYEMQNRLIKENKQGVSEENQKLLLELQKQNTLLKEAQDEISNSVVKLK
                     NIDSGIDNLVLLLAKKLKERLIDEFKYLKNNAQKLNLSRILNIVDITTKDGINDILRE
                     IKFENIKKIEELKTNLSLKYDFLKDDFDNGFEGFKDGISKNIDSIFQSEKFALLRLKI
                     EKLSNLKSDLYELETNLDTVIFDTFKEFKMSEILNSLNINGAFFEFLNDKLKHYEKNQ
                     KSKLESLEKVLQSLKNQDANILNSFEENLEKIEKLKQLEMGLLNAD"
     gene            complement(9408..10133)
                     /locus_tag="RJ266_000219"
     CDS             complement(9408..10133)
                     /locus_tag="RJ266_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase iron-sulfur subunit"
                     /protein_id="HDV7354003.1"
                     /translation="MSRKLTIKAFKYNPLSKISKPHFVTYELEETPFMTVFVCLTLIR
                     EKMDADLSFDFVCRAGICGSCAMMINGVPKLACKTLTKDYLDGVIELMPMPAFRHIKD
                     LSVNTGEWFEDMCKRVESWVHNEKETDISKLEERIEPEVADETFELDRCIECGICVAS
                     CATKLMRPNFIAATGLLRTARYLQDPHDHRSVEDFYELVGDDDGVFGCMSLLACEDNC
                     PKELPLQSKIAYMRRQLVAQRNK"
     gene            complement(10126..12117)
                     /locus_tag="RJ266_000220"
     CDS             complement(10126..12117)
                     /locus_tag="RJ266_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase flavoprotein subunit"
                     /protein_id="HDV7354004.1"
                     /translation="MNIQYSDALVIGGGLAGLRAAIEVAKSGQSVTLLSICPVKRSHS
                     AAVQGGMQASLANGAKGEGDNEDLHFADTVKGSDWGCDQEVARMFAQTAPKAVRELAA
                     WGVPWTRVTKGPRTVVINAQKTVIEEKEEAHGLINARDFGGTKKWRTCYIADATGHCM
                     LYGVANEAIKHQVKIIDRMEAVRIIHDGKKCLGVIARDLTNGQLIAYIARGTMIATGG
                     YGRIYKQTTNAVICEGTGAAIALETGLCRLSNMEAVQFHPTPIVPSGILLTEGCRGDG
                     GILRDVDGYRFMPDYEPEKKELASRDVVSRRMMEHIRKGKGVKSPYGDHLWLDISILG
                     RAHVEKNLRDVQDICKTFNGIDPADEGPKGWAPVLPMQHYSMGGIRTKPTGESQWLNG
                     LFACGEAACWDMHGFNRLGGNSCAETVVAGMIVGDYFADYCKNNGEVIDTNVVKDFLT
                     KEYQYLKSLVDKEGKHNVFEIKNRMKEIMWDKVAIFRTGEGLKEAVDELEKLYKDSQD
                     VKVHCKELDCANPELEEAYRVPRMLKIALCVAYGALLRTESRGAHYREDYPKRDDLNW
                     MKRTNTFWVEGETLPRIEYEELDIMKMEIPPAFRGYGAKGNIIENPLSEKRQAEVDAI
                     REKMEAEGKGRYEIQNALMPYELQAKYKAPNQRIGVDYE"
     gene            complement(12101..12883)
                     /locus_tag="RJ266_000221"
     CDS             complement(12101..12883)
                     /locus_tag="RJ266_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase cytochrome b subunit"
                     /protein_id="HDV7354005.1"
                     /translation="MRELIEGYLGKSIEGKKSKMPAKLDFIQSASGLFLGLFMWVHML
                     FVSTILVSEDFFNSVVHFLELKFVYDNPVMSYLTSFLAACVLVVFFVHALLAMRKFPI
                     NYRQYQILRTHSKKMNHSDTSLWWVQAFTGFIMFFLGSAHLIFIVTNADKISGDMSGD
                     RVVSHFMWLFYAVLLVCVELHGSIGLYRLCVKWGWFEGKNVKESRKKLKTAKWIISIF
                     FLVLGVLSLAAFIKIGYENYQNQTQTTAMIKNYNGANYEYTI"
     gene            complement(12952..13767)
                     /locus_tag="RJ266_000222"
     CDS             complement(12952..13767)
                     /locus_tag="RJ266_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HDV7354006.1"
                     /translation="MEFWQHIYSNFNIIAFSIFGLKVHWYGIMYVIALLLALLLAKFF
                     VRKFQLDINEKHLDSYFIWVEIGVILGARLGYILIYDANTMYYITHPWQIFNPYINGE
                     FVGIRGMSYHGAIIGFLIATLLFCKKYKTNPWIFLDLVALSVPLAYVFGRIGNFLNQE
                     LFGRITNVPWGIYVDGVLRHPSQLYEAFLEGIVVFIIVYLARFKQSFQGELILVYAGA
                     YSLARFICEFYREPDFGIGFVLWGMSMGQILSFIMFITALLVYICIKFKKVNI"
     gene            13857..14756
                     /locus_tag="RJ266_000223"
     CDS             13857..14756
                     /locus_tag="RJ266_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane lipoprotein lipid attachment
                     site-containing protein"
                     /protein_id="HDV7354007.1"
                     /translation="MKKYILLASSMLILAACGGTSSNFVNVSMPNFKPQVPTKVEPID
                     SGVSIALEPINIEQNNNYSDYFENSVLKIRIEKEIDLLKQNLEEQIKTIAQLKGYKIV
                     TTNPDYTLKSSISIYTEEKNAQKTSNFMSGDYVKSNLGINFKGKIDFIDAHNPQNSTN
                     LSSSTKLDSLVALNYPIKNDDGVNMFKTTISTVPTQLNKGLEQPAFEIDKSFLAFYKN
                     TLNTLYNNLPKATDIGKTIPNTNSGFNSFDGDATFEESLPQTNSNQNNTIENTPTQNI
                     PTNPSSTNQNNRSKNQDGVEIFE"
     gene            complement(14831..15619)
                     /locus_tag="RJ266_000224"
     CDS             complement(14831..15619)
                     /locus_tag="RJ266_000224"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HDV7354008.1"
                     /translation="MKFLAVIGDPISHSKSPRMHNNAIKALGLDSIYTRYHLRNANCL
                     REDFFKLGLSGANITLPFKEKALDIADVKDDFARNIGSANTLCLKEDKIYAYNTDALG
                     FLEAIKDFDNIKKALILGAGGTALALAYALKQKGVEVYIANRSKERFKDFLAYPTYLY
                     KNLQDFDFDLVINSTSAGLKDENLPCDRELLDRILPKAKFAFEVIYGRETPFYRLCKE
                     YHLKIKDGLDMLLWQGVFAFELFFEIQDKREMIKNAMQQALILK"
     gene            complement(15616..16452)
                     /locus_tag="RJ266_000225"
     CDS             complement(15616..16452)
                     /locus_tag="RJ266_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HDV7354009.1"
                     /translation="MENQKNEFDDIILEKSNKSEKVKKILLRVIALVILFLAIMIVMK
                     LINGSGDENTQNQSVLPSEPIATQDNNNDTSFESMPITDNTSAEDQFEALRKQFQDEQ
                     NTTQNTTTSSSNNNDTTNFAMPDQEVPAEPTATTSANTTPQASTPKQEVTQTAKSKEE
                     AKKQTAVKKEKESAKQTPKKEQNANDLFKNVDAKPVHPSGLASGIYVQIFSVSNLDQK
                     SKELASVKQKGYDYKLYKTTVGSKEITKVLIGPFEKADIAAELAKIRKDIAKDAFSFT
                     LK"
     gene            complement(16466..17011)
                     /locus_tag="RJ266_000226"
     CDS             complement(16466..17011)
                     /locus_tag="RJ266_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1882 domain-containing protein"
                     /protein_id="HDV7354010.1"
                     /translation="MISPMDMSLIKIIGDHYYIRRDKIVNKITHRGRLFFDKFERVDA
                     PLNLNVMREHAAKKIVVAHDLITKDNKVENIVFDYNGFNAERFYHRAQLILREEGFIN
                     FTAYKTKTPGHLHLYIHKGHTALNEGYSLASKLSMMFASKMPVEWKVFPSMDVPREFN
                     ILILPYEVYQKERGSSWSKHM"
     gene            complement(17008..18252)
                     /locus_tag="RJ266_000227"
     CDS             complement(17008..18252)
                     /locus_tag="RJ266_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HDV7354011.1"
                     /translation="MSLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGS
                     ILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFANVQPNSGSQANQGVYA
                     ALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKE
                     KPKLIVCGASAYARVIDFAKFREIADEVGAYLFADIAHIAGLVVAGEHPSPFPHAHVV
                     SSTTHKTLRGPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDE
                     WKVYAKQVRTNAQVLANVLMDRKFKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAG
                     ITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDVNNEKLQ
                     KNIKQELKKLASNFIIYERAMF"
     gene            complement(18249..19754)
                     /gene="lysS"
                     /locus_tag="RJ266_000228"
     CDS             complement(18249..19754)
                     /gene="lysS"
                     /locus_tag="RJ266_000228"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HDV7354012.1"
                     /translation="MFDNILEQQRIEKAKELKNLGINPYPHFLEKEMSLKTFKDKFSY
                     ILEQVEKRDESVNAVVAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTIL
                     KKNLEVGDIVLVKGFPFVTKTGEFSLHASEVKLATKAIVPLPEKYHGLTDIEQRYRKR
                     YVDMIMNVEVRKDFLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHN
                     SLGVERFLRIAPELYLKRLIVGGFEAVFEINRCFRNEGMDLTHNPEFTTIEFYWAYHN
                     YKNLMDLTEELFALLLDKLNLGKTIEFDGKMINFSKPFERITYKDALCKYGGLDRDLI
                     EDKEKILTKLKADGFEANEKLELGHLQAELFDNYVEEKLINPTFVIDFPISISPLSRR
                     SDEDSQIAERFELFICGRELANGFNELNDPLDQYERFLKQIEAKNAGDEEACEMDEDF
                     VNALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFPAMRPLKSELKEKE"
     gene            complement(19755..20228)
                     /locus_tag="RJ266_000229"
     CDS             complement(19755..20228)
                     /locus_tag="RJ266_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HDV7354013.1"
                     /translation="MLIENVEYDVLLERFKKILRQGGLKYTKQREVLLKTLYHSDTHY
                     TPESLYMEIKQAEPDLNVGIATVYRTLNLLEEAEMVTSISFGSAGKKYELANKPHHDH
                     MICKNCGKIIEFENPIIERQQALIAKEHGFKLTGHLMQLYGVCGDCNNQKAKVKI"
     gene            complement(20230..20793)
                     /locus_tag="RJ266_000230"
     CDS             complement(20230..20793)
                     /locus_tag="RJ266_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HDV7354014.1"
                     /translation="MNFYWFDAFILGFTLLLGLKGIINGLIKEIFGLLGIIGGVFIAS
                     QYATQAAEFIQSTFYKIENQSLAGFAGFLAILIIFWIVCLLVSNFLSRLIKLSGLGFL
                     DRIGGFIFGGAKIFLIFAILVFCVARIDFLNDKLDNFAKNSYTLNLLKETGSFIMNQP
                     LTENSLDHASEKLQDIVSDLNNTQKGE"
     gene            complement(20859..21143)
                     /gene="gatC"
                     /locus_tag="RJ266_000231"
     CDS             complement(20859..21143)
                     /gene="gatC"
                     /locus_tag="RJ266_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HDV7354015.1"
                     /translation="MQIDEKLLSKLEKLSALQITKNRNETIAQLSEIVNFVEKLNELD
                     LDSQEITVSTIKGGAPLRIDEIRNSNVIDEVLDCAPKKQEHFFVVPKIIE"
     gene            21288..21866
                     /locus_tag="RJ266_000232"
     CDS             21288..21866
                     /locus_tag="RJ266_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354016.1"
                     /translation="MGLKDNLKAVKNELNTEEQFIENFIKGERFIRKYKFYISAVVII
                     LVAWFAGNFIISKINDYKTKEANEIYANLIQDPSNKNLLEQLKNKNTNLYAIFLLKEN
                     INDFNNTALQNELKQIYSNTQTNTLLKNIIALSLGDKSIFLKNYDKLLEAYKLLEQNK
                     IEEANVLLSQIKENSSLNQIAKNLKHYQGITQ"
     gene            21863..22861
                     /locus_tag="RJ266_000233"
     CDS             21863..22861
                     /locus_tag="RJ266_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354017.1"
                     /translation="MKKIFLTLFCLIFLCACGTKRQYFEPKQTDGDLSHNSNLKSKIV
                     DWNLVSAKLSNNTAILKNNISIDKFKLPKNYMLLAYQDGEYFTADNNGNLKIFDNSYN
                     EIYNFQFDASVVGVASNGDDLALVLANNTIVLANRSLGIKFSQTLTSAPAQDSRTANP
                     IFLDNIIVYPTLDGKILILSRSNLQVIKDVVISAENFFNNVIHLSVIGDKLIAATAKK
                     IIVVSPARTLYLDADIKDVALSDDGIFILEKDGTIIKTDYNLRKIAEKKFEFAIFVKS
                     NIYNNYLYIFEKTGYLIKMNLNLDNTQVFKLSEAVDKISFMGNGKFYYGDKILDLL"
     gene            22858..23148
                     /locus_tag="RJ266_000234"
     CDS             22858..23148
                     /locus_tag="RJ266_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tram-like protein"
                     /protein_id="HDV7354018.1"
                     /translation="MIKILEQTIKSLKLNLKPYDLSMLTRKKSYICAKDQNNILFMYT
                     GKTKFLMKDALFLENLAQQININNKYFFSMASLCSKAKNHLEMKGFNIYVAL"
     gene            23135..23764
                     /locus_tag="RJ266_000235"
     CDS             23135..23764
                     /locus_tag="RJ266_000235"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HDV7354019.1"
                     /translation="MLLCDIGNSNANFLDDNKYFTLSIDQFLEFKNEQKIFYINVNEH
                     LKEHLKNQKNFINLEPYFLFDTIYQGLGIDRIAACYTIEDGVVVDAGSAITIDIISNS
                     IHLGGFILPGIANYKKIYSHISPRLKSEFNTQVSLDAFPQKTMDALSYGVFKGIYLLI
                     KDAAQNKKLYFTGGDGQFLANYFDHAIYDKLLIFRGMKKIIKENPNLLY"
     gene            23883..25229
                     /locus_tag="RJ266_000236"
     CDS             23883..25229
                     /locus_tag="RJ266_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HDV7354020.1"
                     /translation="MSQQEFDVLVIGAGISGAALFYELARYTNIKNIALIEKYNTAAT
                     LNSKGTSNSQTIHCGDIETNYTLEKARKVKRTADMIVKYGLMQNAQNNFMFSHQKMAL
                     AVGDIECDYMKKRYEEFKELYPYIKFFNKTKIKQIEPKVVLGEDCNQDRPENICAMGV
                     ESGEVFTTVDFGKMSINLIEQAQKQNKNTFVAFNQEIIHIEKKDDIFILKTSNHQEYH
                     AKSVVVNAGAHSLYLAHKMNLGMDKSCWPVAGSFYLTKQKLLNGKVYMVQNPKLPFAA
                     LHGDPDLLADMNTRFGPTALVIPKLERYHGLKSVPEFFEALKLDKTVLKVTFNMFKDA
                     TIRNYIFYNYLFELPFIDKSLFVKDAKKIVPSLKASDIYYAKGFGGVRPQVIDKTKEE
                     LMLGEASITETPGIIFNMTPSPGATSCLGNAERDAKLVCNYLGMEFNEDKFSSELL"
     gene            25278..26720
                     /gene="pyk"
                     /locus_tag="RJ266_000237"
     CDS             25278..26720
                     /gene="pyk"
                     /locus_tag="RJ266_000237"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDV7354021.1"
                     /translation="MLKKTKIVATVGPASEKEEILRQMIINGVNVFRLNFSHGTHEYH
                     KKNLDTIRKVAKELHIRIGILQDISGPKIRTGELKEPFELKKGDRLDFYRETILGEKI
                     AQNHYKISINQKSILDMLKIDEYIYLYDGSIRAKVVNIDDQKIETIIENDGFLNSNKG
                     INFPNTKINIDVITQKDKNDLLWGIKNEVDFLAISFVQNAHDIDEVREILAQNNAKIS
                     IFAKIEKFDAVENIDEIIKSSDGIMVARGDLGIEVPYYKVPNIQKEIIQKANNASKPV
                     ITATQMLFSLAKSKTATRAEISDVANAVLDGTDAVMLSEESAVGIDPANAVDIMCQTI
                     IETEKRYPYNKFNDFNDLDNTDKIMRSSAHLATDLNADAIFSLTSSGKSAIKIARYRP
                     NIEIIAVGHSEKTLNSLSIVWGVNPAILVNKSNELTELLKDSVRSSVEKGFMDEDKCY
                     LLTAGFPTGVEGTSNLIRILNKEQIAYYLQ"
     gene            26818..27453
                     /locus_tag="RJ266_000238"
     CDS             26818..27453
                     /locus_tag="RJ266_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354022.1"
                     /translation="MQVNTFSNIASMAQTQVSNKKADDAKENTKDKNVQSANSSKDVD
                     KNTLEKLNALGGKGITQIYLVQFQQQTMNAVIGSSNAQTGLDSLLNGANLDTAKSILT
                     NIDFASLGYSGKNPLDMNTDELQQLVSEDGFFGVENTANRIADFVIKGGGDDVEKLKK
                     GLEGMKKGFEQAEKMWGGELPQISQDTIDAALKKVSDRIDELGGKTLDLQA"
     gene            complement(27484..29946)
                     /gene="pflB"
                     /locus_tag="RJ266_000239"
     CDS             complement(27484..29946)
                     /gene="pflB"
                     /locus_tag="RJ266_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility protein PflB"
                     /protein_id="HDV7354023.1"
                     /translation="MAEQEDIILEKPEDGLNQPRLDESLEGFKGQEGQAPEDEEFASL
                     PEELPQENSESGFKFTRESAPEDVSTFEEVESQEPTPWYKDRKFMSLVGLSLGIICIL
                     VFTLFYLTFSEGKIKPDIIASKPLEQPVIMPDESYKYNDMQRIDGMIQKANALYLKGE
                     VEQALKVYEQVAVYNESLSNYNLGVSQMNENKFQEAFESFKKAIANGENQSVAAINAA
                     VCALKLNDKEKFRYYIDLAQVYLPKEGKSKLYDYYLSLINYYKGYYPEALQMLQRTDV
                     EPYSDVAKYLSAKIYAKMDFDSKAIQQLNSQGNFESSLSLGLLYARIGEYAKAKVALS
                     TAMKIERDFNQSLAALTLVDIKTGNYQDMLARLQNSYDNDKDRYKILDTYKIQVRLNK
                     DLFNIAVAQNSFSKDLLKKQKDQFDLLFYFAPYQVFDSKQAALYIKKANVTDFVDDST
                     DAGIYLNISKALSSTNVKIANIINYALNQKLRLANQEFQKLIKDYPEHSILHYNLALT
                     YAQMQNYELAYKHFSSSYHLNPKNYLAGAFAMFCAKLIDIDTTKLYNEILDNIAADSN
                     FKANMQKSMLFLVNNNYISMLPYLDETKKDTPLSLIFKAIVAKNNNLNNQVDVKIAKL
                     RSELPEDILANILYFNSLNSNLNIKEYAQNAQIHFKNLKLDYRSVFGGPNIAREFYVN
                     LMHIAGLLNLERQKFKELINVSGAKDEGILQTLAYLDIFAQQYEEAYALYNSLIDDYG
                     AKDTKTLFLAAVAAVGANNPNSAIALLQLSKLTDKNNKESKAALGMLYQEVKNYEAAI
                     SQYKTLPNNFKSEFFTFDINNN"
     gene            complement(29956..31191)
                     /gene="serS"
                     /locus_tag="RJ266_000240"
     CDS             complement(29956..31191)
                     /gene="serS"
                     /locus_tag="RJ266_000240"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HDV7354024.1"
                     /translation="MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKEKTA
                     LEEFQAFQNKFSKELATAEDKESLKAKLSENKSKINEQSTKVNALENELEEIAHAIPN
                     IPDECVPAGEDENENVELKKVLNPPSFDFTPKEHFELGESLNWLDFMRGVKISQSRFC
                     VLKNEGALLSRALVNYMIDFNRSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDD
                     EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQF
                     EKVELVSITKPEQSDSVFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEV
                     WLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIME
                     NYQDKEGKIHIPDVLKKYF"
     gene            complement(31202..32161)
                     /gene="trpS"
                     /locus_tag="RJ266_000241"
     CDS             complement(31202..32161)
                     /gene="trpS"
                     /locus_tag="RJ266_000241"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HDV7354025.1"
                     /translation="MRVLTGLQPSGDLHIGNYFGAIKQMVDAQEKSQMFMFIANYHAM
                     TSSQDGEKLKQNSLKAAAAFLSLGIDPQKSVFWLQSDVKEVMELYWILSQFTPMGLLE
                     RAHSYKDKVAKGLSASHGLFSYPVLMAADILLFDTRIVPVGKDQIQHVEIARDIALKV
                     NNEWGEIFTLPEARVNEEVAVVVGTDGAKMSKSYQNTIDIFSSEKTLKKQISSIVTDS
                     TALEDPKDHENCNIFKIAKLFLDESGQKELQIRYEKGGEGYGHFKIYLNELVNAYFKE
                     AREKYNELLEKPSHLKEILDFGATKARKIAQEKMQKIYEKIGL"
     gene            complement(32158..32655)
                     /locus_tag="RJ266_000242"
     CDS             complement(32158..32655)
                     /locus_tag="RJ266_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HDV7354026.1"
                     /translation="MMKAKNIVFIGFMGSGKSTLARALAKDLDLVFLDSDFLIEQKFN
                     QKVSEIFEQKRENFFREQEQKMADFFSSCEKACIATGGGFVNVSNLEKAGFCIYLKAD
                     FEYLKKRLDKDEISKRPLFYDEIKAKKLYNERLSKYEQKANFILNIENKNIDELLSEI
                     KKVIK"
     gene            complement(32642..34024)
                     /gene="der"
                     /locus_tag="RJ266_000243"
     CDS             complement(32642..34024)
                     /gene="der"
                     /locus_tag="RJ266_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HDV7354027.1"
                     /translation="MQSIILIGKPNVGKSSLFNRMARQRIAITSDISGTTRDTNKTQI
                     HIHSKKAMLIDSGGLDESDELFKNVKKNTLKVAKESDIILYLVDGKLAPDDEDRQFFY
                     SLKKLGKPIALVINKVDNKKDEERAWEFANFGVKEIFNLSVTHNVGLDELYEWLEKFL
                     HEEFLIPDEEENLEDFLEYYEEGKEFQFKEVDQNHIRVGIVGRVNVGKSSLLNALVKQ
                     ERSVVSSIAGTTIDPVNESVVHKDKVIEFVDTAGIRKRGKIQGLERFALNRTEKILSH
                     SQIALLVLDAHEGFNELDERIAGLVAKHYLGVIIVLNKWDKSEMDFDKTVKELRLDRF
                     KFLAYAPVISVSALSGKRVHVLLDKILQIFENFTQKIQTSKLNTLIENATRAHPLPHD
                     YGKLVKIYYAVQYDLAPPKIALIMNRPKALHFSYKRYLQNQIRKEFNFEGVPLVIASR
                     KKGSKENDES"
     gene            34126..35058
                     /locus_tag="RJ266_000244"
     CDS             34126..35058
                     /locus_tag="RJ266_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDV7354028.1"
                     /translation="MLKVIKHNLGIYFMILACLDFALMGACAKILSKEMSSIEIMFFR
                     NIIGIFFIVYLLKRSKAHKEGGYFWLLVFRGVVGTLSLYMFFYNVSNITLGGAFAFQK
                     TAPIFITLIAFVVFKENIGIKGWIGILIAFGGVLLIAQPWAHNLNHSGFDLKNSVIGI
                     TSGFLAALALTSVRELRKSYTTEQIAFSFILLGTLMPLISMISAEFFEPQHLDSLHLD
                     FILAPFVMPSLTAWLIIAIMGTLGTIYQIHVTKAYGIAKQAGVVAGVSYLDVVFSMIV
                     GIILGDNLPSTMVFLGIIGIIFGGLILVKNKGKK"
     gene            35055..35870
                     /gene="kdsA"
                     /locus_tag="RJ266_000245"
     CDS             35055..35870
                     /gene="kdsA"
                     /locus_tag="RJ266_000245"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002827952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HDV7354029.1"
                     /translation="MKKMILIAGPCVIESKDLIFKVAEQLKNFNENPNIEFYFKSSFD
                     KANRTSINSFRGPGLEEGLKILQSVKDEFGMKILTDIHESNQANPVSEVADVLQIPAF
                     LCRQTDLLVAAAKTKAKINIKKGQFLNPSDIKYSVKKVLQTRGIEDEGYEAAQRNGVF
                     VAERGASFGYGNLVVDMRSLVIMREFAPVIFDATHSVQMPGAAGGSSGGKSEFVEPLA
                     RAAAAVGIDGFFFETHINPCEALCDGPNMLNLTRLKNCVNTLLEIQNIIKENK"
     gene            35867..36331
                     /locus_tag="RJ266_000246"
     CDS             35867..36331
                     /locus_tag="RJ266_000246"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HDV7354030.1"
                     /translation="MNIIEGKLNLDSNTKIAIINARFNHIITDRLVEGAKDAFLRHGG
                     KEENLSLILVPGAFELPYALKKAIESKKFDAICCVGAVIRGSTPHFDYVSAETTKGIA
                     NVSLNHNIPVSFGVLTTDTIEQAIERAGSKAGNKGFEAMTTVIEMLNLSKEL"
     gene            36331..36729
                     /gene="nusB"
                     /locus_tag="RJ266_000247"
     CDS             36331..36729
                     /gene="nusB"
                     /locus_tag="RJ266_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HDV7354031.1"
                     /translation="MATRHQVRQSVISLLYAFELNSQNNVFVDEILDEKKIRNEQKNF
                     TLNLYNGILDNLNNIDETLNSFLNDNQITALGHVERAILRLGAYELLFTDTPSAIVIN
                     EAIELAKELANDNSPKFINGVLDALIKAKK"
     gene            36726..37565
                     /gene="pyrF"
                     /locus_tag="RJ266_000248"
     CDS             36726..37565
                     /gene="pyrF"
                     /locus_tag="RJ266_000248"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HDV7354032.1"
                     /translation="MKLCVALDLSTKEECLQLAKELKNLDIWLKVGLRAYLRDGFKFI
                     EELKKVDDFKIFLDLKIHDIPNTMADACEEISKLGVDMINIHASAGKIAMQEVMTRLS
                     KFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVCSVFESKK
                     IKEHTSSNFLTLTPGIRPFGETSDDQKRVANLAMARENLSDYIVVGRPIYKNENPRAV
                     CEKILNKIHRKNISENDIEQNYEVIQQKEWDMCNHFEEWIKTQPDKEHALKEFYAKCG
                     IKY"
     gene            37562..>38198
                     /locus_tag="RJ266_000249"
     CDS             37562..>38198
                     /locus_tag="RJ266_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354033.1"
                     /translation="MNYQQLECDYFNLYNQFLSVDFQISLFEKDHKGLIKDFIFFYYQ
                     ILKQKDLSYLLEVRNKISLKVYNYMQEHSTSPKDLSLICLRENKHIEFFQIFYKALAY
                     FVAFRKKLDGEQKIKNLISNINDCFGYHFLNSDFNNLQNFQKSDLFTLPEKHLKYFHF
                     AMIHLCFMVLNPLNFKDSNRHLDKAINYLVDGTFEIYELIFKEYFLLFSKDK"
BASE COUNT        13228 a         6652 c         5028 g        13290 t
ORIGIN      
        1 cgatattgat tttttcaggt ttgtaaaatt ctatcatagc cttttcacaa agtaaaattt
       61 tttcaaaaag ttccttttgc aactctaaag gacaatcgct aaattcttta taaatttctt
      121 tagtaaaaat tttaagccaa ggcacttgag cctcctcttt ctctatataa atcaaatcat
      181 tttcataaat cattacattc ctttgaaatt gtatttatga ttattttaca aaatttatca
      241 aatttttaag tcaaaatgcg ttaaaattcc taaaatttaa aaaacaaaaa ggaggataaa
      301 tgcaaattag ttcaagttat aactcttatg attactactc tagcaaacct tcttttgata
      361 aaacaaatca atctgattcc actcaaaaag atgaaaaaaa tcttagcgaa aataaagatg
      421 ataaagaaaa aaatggcgaa caaacccaaa tggttaatgg cgtagagcta agccaaaaag
      481 aagtagctca agttcgcgaa ctccaaagta tcgatagaaa tgtaaaggct catgaagctg
      541 cacatcaagc agcgggcggc ggcttagcag gtgctgcaag ttttacttat acaagaggcc
      601 ctgataatca aatgtatgct acagcgggcg aagttcctat cagcatgcaa aaaggaaaca
      661 caccagaaga aactatagcc aatgcaagac aaatcgcagc agcagctatg gctcctgctg
      721 atcctagccc acaagactat aaagttgcag caaatgctac aaaaatggaa tttgaagcaa
      781 gagctgaagc aatgaagctt aaagccgaag aagtcaaaga aaaagaagaa gaaaataaag
      841 aaaaagatga taaaaattca gaaaatagct tagaaaaaac agataaagat tcaaaaaaca
      901 acgataaaaa ttcaaatttt gataaagact ttaaaaatct tgtcgctaga acttatcaac
      961 aaaactcaca aaataacggc attaaattca gcatcgcatc ttaaaattct taatttaaat
     1021 aaaaaatttc cttatgaaaa tgatgacttg aatttatatg ttaagatatt taacattttt
     1081 tcttttttat aatttaaatt tttgcatttt caagctttta tatctatact ttttggtgca
     1141 gaattgaaag aaagaatttt attaaattct cctgcatcat catcactaaa tttcacacca
     1201 aaaagaagtt ctaattcttt actagtgcta aatttatctt ctaatagttt ttttacaagc
     1261 tcgtttttag cattgtcatc tttgtaagtt tctttgtttt tgctttcgcc ttgaatagct
     1321 ttgaagggtt tttcatctgg gttttgacca ttttcgttgc tttcttgggt agaatttgag
     1381 ctttgttgtt tatttaaaaa cctatctatc tcttcttgag taaggggttt aacatcaagt
     1441 gcgtcaataa atcgtttttt ctttcatctt tttcagcaac ccatattctt gcgaattcgc
     1501 ccgcacttgt aagagttttt agaagattgc ctttgcgtat tctggaaatc ttatctcctg
     1561 gaataaattc aatattatca atctcatatg ctccgttaag aatttcccat tcctcttcag
     1621 ttaatttatc ttttcgcatt cgctcaagca aggaattttc aacttcttta acatctgggt
     1681 ctccattata gccgtatttg ttcgcatatt cttcactaag catttctcca aaatattttt
     1741 gcacaaaatc ttcccaataa gcatcttctt cactttttgg ctcatctttt ttagtataag
     1801 tatattcatt attttcatct tttttaatac ttaaagcatt atttggataa ttgatattag
     1861 gatagtgaga attaagactt atcataaaaa tcctttttta aaatactaaa ataatcttgg
     1921 attccaacca ccaagagcag actacatttg tctttttgta taattgtagc tcgaataaga
     1981 atttatacca ttaatcattt ttgccttcct tgatattata ctatatcgga agaaaattaa
     2041 aaatttataa tcttgagagt tttcaaaaac tctcaagtta ttatcaagct aagctttttc
     2101 cacttttatg atattttaaa ataccttcag cacagcgata agccaaagct cccacagtat
     2161 cagttggatt atatccacta ttgtgttgga aatttcctgc tcctacaaca aaaagattat
     2221 ccgcatccca gtgttgtaaa taagtattaa ccacactagt ttctctatct gcacccattg
     2281 ttgttccacc tgtgttatga gtagattgat aaggcacaac gctataatcc ttaagataag
     2341 cacctttttt gattgatttt actccttgca ttctttttgc tacctcagct gttttatctg
     2401 taataaattt atgcaaagct ctatcttgat cggtgaaatt ataagttaag cgtaaaagtg
     2461 gcataccaaa agcatcttta taagttggat caagacttaa ataattattc ttatgaggca
     2521 aagaagcacc ttgtcctgct acggtaatag ctcttgtgaa attatagttt aatgcttttt
     2581 taaattcagc accccaagtt ggagctcctg ctggaagtgg ggctgattgt atagggcgag
     2641 ttccaagctg aacgctataa atcatagctc catgaaggaa tttttcctta gaatgatcaa
     2701 aattatctcc gttaaaatca tcactcgtag ttcctaaagc acctgaaccc atgaaggtgt
     2761 taaattgctc atcaaagaaa gctgttgtgc ccatgttcat ttgataacaa taatttctac
     2821 ctaaagttcc tttacctgtt tttggatcgt attgctcacc tatgttgctt accattaaaa
     2881 gcttagcatt gttaaacata taacttgtaa gcacaactat atcagcaggt tgaatatact
     2941 ctttcatcgt tctagtatcg acaaatttta cccccgttac ttttccgtct tttttaagaa
     3001 tttgcgttac attgctataa gtgcgtatag tgtatttacc tgtgctcata gcctttggaa
     3061 ttactgtgtt taaaggactt gcttttgcgc catactcaca accaaaacgc tcacaatacg
     3121 cacagtattg acaaggagct aaatcttgac catcagggtt tgtatagcca cctttagaat
     3181 ttgaagctgg caaacgataa gtgtgtaaat ttgaactttt tgctgcactt tcaaatcgtt
     3241 taagcatttt agtattttca agaggttctt gtggataagg actagatcta aaagccccca
     3301 ttttttctgc taaaggattt ggctcacctg ataccccaca ggttttttca aatctatcat
     3361 aataaggctc catatcctta taagtcacac cccaatcttg caaggtataa tcattaccta
     3421 atttattacc atatctttgt ttgcttaggg tttgaatttc aaagtcataa ggcataaacc
     3481 taaaagtcca accattccaa tgcacccctg caccgccaac attattaccc aataaaaacg
     3541 aacccatttt acgataaggt aaggctaaac cgctaggatc atggcgaaaa gtcacagtgt
     3601 ctttcgagca atcttgcatc aaaccataat taatcccgta tctccactca tcatggataa
     3661 aattaaaatt ttcagtactt tgcatatgtc cgcgttctaa actaagtaca ttcaaacctg
     3721 ctttagtaag ctctgcagcc actatacctc cagtccatcc tgctccaact gttaccacat
     3781 ctactttttt taatacttca gccattttaa ctctccatat ctgctaaact cataggttca
     3841 atgttaaaaa attcatcact tgcaatttta tccacatagc tcatttgtgc gcctggatat
     3901 tgcatcattc tccaaccatt tttattatca tttccaccat aaattggatc agctaaaact
     3961 ccagctactg tcatatctct taaaagagtg aaaaaataag aagatttaaa acccgtagtt
     4021 tgaatttttc ctttttcaaa atcgcttaga attttatcct gatctccacc tttaagcaga
     4081 gaaaaagatt ttttataacg cttttgagca ttttcttcaa gagcatgcac accttctaaa
     4141 aaaatatctt tgcgttgcat aggagtttga tagccttgtt cagctttacc ctccatgaaa
     4201 ggcccttgca tatattctct atcattataa ccataagcac tagctagctg attatcgata
     4261 aaataaggca cgcctaaacc tatagctcct tctccttgct catctttagg ataaattctt
     4321 tcacaggctg cacttaaggt atcaaattca gtttgagttt gaaaaaacat tctacctcta
     4381 actttatttg attttccttg tgaagcttga tgcgaatgcg taagttctgc tgcctttaaa
     4441 acagcaccgc cacctatagt actagctgct actacagaac cacctaaaag ccctagttta
     4501 aaaaagcttc tgcgatcaat aatattgtct tgcattactt ctccttgata ataatttaaa
     4561 caagactata ttagccctat taatataaat ttaactttaa aaagcgataa attttgtgtt
     4621 attcttaatt ttatttaaga atatctttga aagcaatgaa aatagaactt ttaataaagc
     4681 tctatatctt tagaattaag ttctttataa gctgcacaag cttcttgata tttttgatca
     4741 caagccatac caaaatatct ttttgccttt attaaatctt gtttttctag ttgattatag
     4801 cgtcctaaca aataacaaga ctcaccaaaa cctaaagtgc aagatttaga ataaaaagca
     4861 agggcagatt ttacacttgc tttaacaagc tctcctttat catataaaga ccctaattga
     4921 taacaagctc ttgcattttt taaatcacaa gatcttttat aaaaacttga ggccatttgt
     4981 ccatcttttt ctttttcata aaataaagct atattattac aacttaacga ttctcctaaa
     5041 gtacaagctt tattaaaagc caaaagagct tcatttttat aaccttgatt ttgcaaaagc
     5101 aaagccatat tagaacacgc acttgctaaa cccaatttac aagctttatc ataaaattta
     5161 taagcttgat ttaaatcctt actcacaccc ttagcactct catgcataaa agctaaagaa
     5221 aaacaagctt tagaaatatc tttttcgcaa agattcttaa aaatttcata agctttatca
     5281 aatttatttg cctcgtaaag ttttaaaccc tcttctagct cacttaatgc aaataatgaa
     5341 ttaaaaaata aaaataaagc taaaaatatt ctcatcaatc ttcctttata ctttctctaa
     5401 catttaaaat ctgcactctt cttttttgaa gttctgcttt tttaagatct aaaaatttat
     5461 ttttttcttg aattaaattt tgactttgtt ctaagaaatt ttttgcaatt tttgtcaaaa
     5521 taggcttatt aataagcaaa gcttcaaact cataaacatt taattcattt aaaactcttt
     5581 cataaatttc gcttttttta ggataaaaaa gtacaaattc agaactatca agctcataaa
     5641 gaacacggct ttcattgatt ttacgactaa aaaatgcaag gcttagtttt gtagcatttt
     5701 cataatttgt aaaagcctta agatttaatt tttcaaaaaa taaatcaagc tctaaaatac
     5761 ttttaaataa aagctcttta aaatctttca aaaagtactc atcgcttgca ttacaaaaag
     5821 cccttaattc gctaaaattt ttatcacttt ggaaaatgtg atctttttgt atatttgaaa
     5881 attctgcttt aaaaagcaaa atttctctct caagcatgtt tataaagtct tttaatttca
     5941 tcttgatttc ttcaaaagat ttataaagtt catttttgat ttttttaaac tctttactca
     6001 tcacatcact attataaaac atcgccaaaa aagcatcgtc acttgaaata taaggcactt
     6061 tataatcata tcttgtgtat aaatctttct ttaaaaatcc tttgctttct ttgtaaaaaa
     6121 aagcatcttt ttccttaaca tttgcaaaaa tttcactaga aattctttcg ctaatgcttt
     6181 taagctgttc taaaatctga tgatttaaaa tttcaatctc ttttaaaaaa ttttcatacg
     6241 ctaaaagtaa atgcttttca taactttgaa attgatttaa taaatgatca aaaatactta
     6301 caaaaagttg gttttcatct tctaaaattt cgcataaatt taaaattttt cttttaacaa
     6361 atttttcttt taaagctgtt gtatctagct gagttaaaaa atcaagtaaa gattgaaaat
     6421 tagatttttc atagctttgc tcatctttag cttctttgca agaaatggta ataagctcat
     6481 caaaatattt taaaaataca ctttttgcat aatttaaaac attatctagc tcttctgtgt
     6541 ttaatttatc tttttgattt aatacacaaa tgctattttc tcctaaaagt tctaaatttg
     6601 cttttatagc atcttcttca ctttttttgc ctgcattatc aatcaaactt aaccaaatcg
     6661 ccccatgaat atttttaagc tcatcaagag ttgttaaagt atcattttca tttgcattta
     6721 aacctggagt atctacaaga gtgatttttt caagtaaagg aatgggtgca aaaatatgca
     6781 aactttttgc ttgttttact tcatttcttt gatccgtata aaaggctaat ttttctatat
     6841 ttgtgataat atcacttcca tcttcaaatt ctactcttaa aaaatattct tttgcatagc
     6901 gtaaaaaagt aggtttaaaa gtaacaggaa caacacccgt aggcaaacaa tcacacctca
     6961 agatcaaatt tagcaaactt gatttaccac ttgaaaactg ccctataata gcgatattaa
     7021 cattcttatc taaagaaaac acaagctctt ttaattcatt ttctaaagca taacttgcgt
     7081 gcataaaagg ctcgttaagt tctttgcaaa gctcttgaat acgcccttta aaactatcat
     7141 caaagctcac actataagta ttttcatagg cttttataaa atcatttaaa agattaatct
     7201 gcatttaaaa gccccatttc aagttgtttt aatttttcaa ttttttctaa attttcttca
     7261 aaagaattta aaatattagc atcttgattt ttcagactct gtaaaacttt ttcaagactt
     7321 tctaattttg atttttgatt tttttcataa tgttttaatt tatcatttaa aaactcaaaa
     7381 aatgctccat tgatatttaa agagtttaaa atttcgctca ttttaaattc tttaaaagta
     7441 tcaaaaataa ccgtatctaa attcgtttca agctcatata aatctgattt tagattgctt
     7501 aatttttcaa ttttcaatct taaaagtgca aatttttcgc tttgaaaaat actatctata
     7561 ttttttgaaa ttccatcttt aaaaccttca aaaccattat caaaatcatc ttttaaaaaa
     7621 tcatatttta aagataaatt tgttttaagc tcctcgattt ttttgatatt ttcaaattta
     7681 atttccctta aaatatcatt aatcccatct tttgtggtaa tatcaactat atttaaaata
     7741 cgagaaagat taagcttttg tgcattattt tttaaatatt taaactcatc tatcaagcgt
     7801 tcttttaatt ttttagccaa aagtaaaaca agattatcta tgccactatc tatattttta
     7861 agttttacaa cggaatttga aatttcatct tgtgcttctt ttaataaggt gttttgcttt
     7921 tgaagttcaa gtaaaagctt ttgattttct tcacttacac cttgtttatt ctccttaata
     7981 agacgatttt gcatttcata ttcgcttaga atatttttaa gctctaaatg taattctttt
     8041 ttgtaagctc ttaaggcaat cttacttttt tctcctgcat aaagctcgtt aaaaagatag
     8101 ttttcaaatt cttgcatacc acttttttgc aagctttcct tggacgctaa acctttataa
     8161 aaatcacttg ccattttagc gctcacacat aaaaaatcaa tcttttccac taaattttca
     8221 tctaaatcca caagtcttga ttttaagctt tccttggtat aaacaatgac ttcttctaaa
     8281 tcctttttgc ttaacaaatc cactttagtt aaaacaatta aaaacttact cagccttgag
     8341 tttaaaagac aatgcaccaa aaagtctgca tctttttgag tcaaactttg agaagcattc
     8401 attaaatgaa ttaaaaaatc actttcttta agatactcat ttgtaacaat ttctctttga
     8461 actacaacat catcaagccc tggagtatca actatggaaa tattattttt taaaaattct
     8521 aaatgacttt taatttctat ttttttaatt aaagctgaaa ttttattttt agctgaactg
     8581 aaatttttaa gctcgcaaag tgcgatattt tgtattaaag gtttatcttt gataaaatcc
     8641 tctatattta cactcttatc cagcttgtca ataaattctt ttaaatctgc attaaagtgc
     8701 gaactttcaa gtatattttg ccattctttt ctatcccaaa aatatatctt tgcttcttca
     8761 ctcttaccat agcttaatac tgttaaatta gctgtttcag gtatgtttga aacccctaaa
     8821 aaatcttctt ttaaaagagc atttaaaagg cttgattttc ctgcattcat cacgccagtg
     8881 atggctatat taaactctaa attttgaaat ttttccaaag ttttttgaag tctcgatttt
     8941 aaattttcat caaaacttag cttttgaagc tccaaattaa tggcgtttaa ttctttaaaa
     9001 tcattttgaa ataaagcttt ttgatctata ctttgaactt tttcttgtga aataaaatca
     9061 aatatttcag tattttttga aattttttct aaaattttca aagctttaag caaatcttgc
     9121 tttggaacaa aacctgattt aaaaagattt aaaatacaaa tttgagcatt ttgtatacta
     9181 aaaatatcca ctcttaaatc aatttttttg caaagctctt gaaattcttt taagagaaaa
     9241 tatctttcat aattgtcttt attgacactt aaaataatcg cacactcggc cgtatcaagt
     9301 ttgcttttat cttgaaattt agcatcaaaa tttaaaaatt ggagttcatt ttgccaaact
     9361 ttttggaata attctttcat aatcttcccc ttaaaaaggg gaaagattta tttatttctt
     9421 tgagcgacaa gttgtcttct catataagcg attttacttt gtaaaggtaa ttctttaggg
     9481 caattatctt cacaagcaag caatgacata caaccaaaaa caccatcatc atcgcctact
     9541 aattcataaa aatcttccac acttctatgg tcatgcggat cttgtaaata tctagctgtt
     9601 cttaaaagcc ctgtagcagc tatgaaattt gggcgcataa gtttagttgc acaagaagct
     9661 acacaaattc cacactctat acaacgatca agttcaaaag tttcatccgc aacttctggc
     9721 tcaatacgtt cttcaagttt agaaatatca gtttcttttt cattatgcac ccagctttca
     9781 acacgtttac acatgtcttc aaaccactcg cctgtattca cgcttaaatc tttaatatgt
     9841 ctaaatgcag gcataggcat aagctctatc actccatcaa gataatcttt agtcaaagtt
     9901 ttacaagcaa gttttggcac tccattaatc atcattgcac aagatccgca aatccctgca
     9961 cgacaaacaa agtcaaaact cagatctgca tccatttttt cacggatcaa agtcaaacat
    10021 acaaaaaccg tcataaaagg agtttcttca agctcataag tcacaaaatg tggtttagaa
    10081 attttgctta aaggattgta tttaaatgcc tttattgtca attttctact cataatcaac
    10141 tcctattctt tggtttggtg ctttatattt agcttgcaat tcataaggca ttaaagcgtt
    10201 ttgaatttca taacgacctt tgccttcagc ttccattttt tcacggatag catccacttc
    10261 agcttggcgt ttttcactta aaggattttc tataatattt cctttagcac cgtatccacg
    10321 gaatgctggt ggaatttcca ttttcataat atcaagctct tcgtattcta tgcgtggcaa
    10381 agtttcgcct tctacccaaa aagtattagt tcttttcatc caatttaaat catctctttt
    10441 tggataatct tccctataat gcgccccacg actttctgtt cttaaaagtg ctccataagc
    10501 tacacaaagt gctattttta acattcttgg cactctatac gcttcttcaa gctctggatt
    10561 tgcacaatca agttctttac aatgtacttt aacgtcttga gaatctttat aaagtttttc
    10621 aagttcatct actgcttctt tcaaaccttc acctgttcta aagatggcca ccttatccca
    10681 catgatttct ttcattctgt ttttaatttc aaaaacatta tgcttacctt ctttatctac
    10741 taaagatttt aaatattgat actctttagt taagaagtct tttactacat ttgtatcaat
    10801 tacttcacca ttatttttac aataatctgc aaaataatct cccactatca tgcctgctac
    10861 aacagtttca gcacatgaat ttccacctaa acgattaaat ccatgcatat cccagcaagc
    10921 tgcttctcca caagcaaaaa gtccgtttaa ccattgactt tcacctgttg gtttagttct
    10981 aattccaccc atagaataat gttgcattgg aagaactggc gcccaacctt ttggaccttc
    11041 atctgccgga tcaataccat taaaagtttt acaaatatct tgcacatcac gaagattttt
    11101 ttccacatgc gcacgaccta gtatagaaat atcaagccat aaatgatctc cataaggact
    11161 ttttacacct ttacctttac gaatatgctc catcattcta cgacttacca catcacggct
    11221 tgcaagttct tttttctctg gttcataatc aggcataaaa cgatatccat ccacatcacg
    11281 caaaattccg ccatcaccac gacaaccttc ggtaagcaaa ataccgcttg gcacaatagg
    11341 agttgggtga aattgcactg cttccatgtt tgaaagtctg caaagtcccg tttcaagagc
    11401 gatagccgca cctgttcctt cacaaattac tgcatttgta gtttgtttat aaattctacc
    11461 ataaccccct gttgctatca tagttcctct cgcaatataa gcgattaatt gtccgttggt
    11521 taaatctcta gcaatcacac ctaaacattt tttaccatcg tggataattc ttactgcttc
    11581 cattctatca atgattttta cttgatgttt aatggcttca tttgctacac cataaagcat
    11641 acaatggcct gttgcatctg caatataaca agttctccat ttttttgttc caccaaaatc
    11701 ccttgcattg ataagtccat gcgcttcttc tttttcttca atcacagttt tttgcgcatt
    11761 gattacaaca gttcttggac ctttagtaac tctagtccaa ggcacacccc aagccgcaag
    11821 ttcacgcact gcttttggtg cagtttgagc aaacattctt gctacttctt gatcacagcc
    11881 ccaatcactt ccttttactg tatctgcgaa gtgaagatct tcattatcac cctcaccttt
    11941 cgccccattt gctaaacttg cctgcatacc tccttgcacc gctgcagagt gagaacgctt
    12001 cactggacaa atacttaaaa gtgttacact ttggccactc tttgctactt caatagccgc
    12061 tctaagacct gctaatcctc cgcctattac taaagcatca ctatattgta tattcataat
    12121 ttgctccatt gtagtttttt atcatcgcag tagtttgggt ttgattttgg tagttttcat
    12181 aacctatttt tataaatgct gcaagactta acacacctaa aactaggaag aaaatactga
    12241 ttatccattt agcagtttta agctttttgc gactttcttt tacatttttt ccttcaaacc
    12301 aaccccattt aacacaaagt ctataaagcc ctatacttcc atgaagttca acacagacta
    12361 aaagaacagc ataaaaaagc cacataaaat gacttacaac cctatctcct gacatatcgc
    12421 cgctgatttt atctgcattg gttacaataa aaataagatg agcagaacct aagaaaaaca
    12481 taataaaacc tgtaaaagct tgaacccacc ataacgaagt atcgctgtga ttcatttttt
    12541 tactgtgtgt tcttagtatt tgatactgac ggtaattaat aggaaatttt ctcattgcaa
    12601 gtaaagcatg aacgaaaaaa accactaaaa cacaggcggc taaaaatgaa gtaagataac
    12661 tcataacagg attatcgtaa acaaatttta attctaaaaa atgtaccaca gaattaaaaa
    12721 aatcctcact gactaaaatt gtagaaacaa aaagcatatg cacccacata aaaagaccta
    12781 aaaaaagccc tgaggcgctt tggataaagt ctaatttcgc aggcatttta ctttttttgc
    12841 cctcaatgct cttacccaaa taaccttcga taagctcacg catctttact cctttgtaaa
    12901 aagaaattaa aaaaatccat ttcattatat tacaaaagtc tttaagatag attaaatatt
    12961 tactttttta aactttatac aaatataaac taacaaagct gttataaaca ttataaaact
    13021 taaaatttgc cccatactca taccccataa aacaaaacct ataccaaaat caggctcgcg
    13081 ataaaattca catataaatc ttgccaatga ataagcacca gcatacacaa gaatcaattc
    13141 cccttgaaaa ctttgcttaa atcttgctaa ataaactata ataaaaacaa caataccttc
    13201 taaaaatgct tcataaagtt gcgatggatg gcgcaatact ccatcaacat aaattcccca
    13261 aggcacattt gtaatgcgac caaaaagctc ttgatttaaa aaatttccta tacgaccaaa
    13321 aacataagcc aatggaacac ttaaagcaac caaatcaaga aaaatccaag gatttgtttt
    13381 atatttttta caaaacaata aagtagctat caaaaatcct ataattgctc catgataact
    13441 catacctcga atacctacaa attcaccatt aatataagga ttaaaaattt gccaaggatg
    13501 agtaatataa tacatagtat ttgcatcata aatcaaaata tatccaagcc ttgcacctaa
    13561 aataacccct atttcaaccc atataaaata actatccaaa tgtttttcat taatgtctag
    13621 ttgaaatttt cttacaaaaa atttagccaa aagcaaagcc aaaagcaaag ctataacata
    13681 cataatgcca taccaatgca cctttaaacc aaagatgcta aaagctataa tattaaaatt
    13741 tgaataaata tgctgccaaa attccatata tctttcctaa ttttctttta taaaaatata
    13801 acaaaaaaac tttaacttgc tataattaac acaaacacat taaataaagg taaaaaatga
    13861 aaaaatatat tttacttgct agtagtatgt taattttagc agcttgtgga ggcacaagta
    13921 gtaattttgt caatgtttct atgccaaatt ttaaacccca agttccaaca aaggttgaac
    13981 ctattgattc tggagtaagc attgctcttg agcctattaa tatagaacaa aataacaatt
    14041 attctgatta ttttgaaaat tcagtgctta aaattcgcat agaaaaagaa attgatcttt
    14101 taaaacaaaa tttagaagag cagatcaaaa ccatcgctca actaaaaggc tataaaatag
    14161 ttactactaa tccagactac actcttaaaa gttcaatcag tatttatacg gaagaaaaaa
    14221 atgcacaaaa aacaagcaat tttatgagtg gagattatgt aaaatccaat ttaggtataa
    14281 attttaaagg taaaatagat tttatagatg cacacaatcc acaaaattca accaatcttt
    14341 caagtagcac taaactagat tctttagttg cgcttaacta tcctattaaa aatgatgatg
    14401 gggttaatat gtttaaaact actatctcta ccgtaccaac tcaactcaat aaaggtttag
    14461 agcaacctgc ttttgaaatt gataaaagtt ttttagcttt ttataaaaat acattaaata
    14521 cactttataa caatctacca aaagcaacag acataggcaa aactatacct aatacaaaca
    14581 gtggttttaa tagttttgat ggcgatgcta cctttgaaga aagcttacct caaacaaatt
    14641 ctaatcaaaa taatacaatt gaaaacacgc ctacacaaaa tattcctaca aatccatctt
    14701 caacaaatca aaataatcga agtaaaaatc aagatggggt agaaatattt gaatgataaa
    14761 acttgtggga aaattaaact ttctcacaca aaaaataaga ttttcttata caagaaaaat
    14821 aactatcatt ctactttaaa atcaatgcct gttgcattgc attttttatc atctctcttt
    14881 tatcttgtat ttcaaaaaaa agttcaaaag caaaaactcc ttgccataaa agcatatcaa
    14941 gtccatcttt aatttttaaa tgatactctt tacacaatct ataaaaaggt gtttctctgc
    15001 cataaattac ctcaaaagca aatttagctt taggtaaaat tctatctaaa agctccctat
    15061 cacaaggtaa attttcatct tttaatccag cagaagttga atttataacc aaatcaaagt
    15121 caaaatcttg caagttttta taaagataag ttggataagc taaaaaatct ttaaatcttt
    15181 ctttactacg attagctata tacacttcta cgcctttttg ttttaatgca taagcaagcg
    15241 ccaaagctgt acctccagca cccaaaatca aagctttttt tatattatca aaatccttaa
    15301 tagcttctaa aaaacctaaa gcatcagtat tataagcgta aattttatct tcttttaagc
    15361 ataaagtatt tgcagagcca atatttctag caaaatcatc cttcacatca gcaatatcta
    15421 aagctttttc cttaaaaggc aaagtaatat tagctccact aagtcctaat ttaaaaaaat
    15481 cttctcttaa acagttagca tttcttaaat gatagcgtgt ataaatgcta tcaagcccta
    15541 aggctttaat agcattatta tgcattctag gcgatttaga gtgagaaata ggatcgccta
    15601 taactgctaa aaatttcatt ttaaagtaaa agaaaaagca tcttttgcaa tatccttacg
    15661 gattttagca agttctgctg caatatctgc cttttcaaat ggtcctatta aaaccttggt
    15721 aatttcttta cttccaactg tagttttata aagtttataa tcataacctt tttgctttac
    15781 agaagcaagt tcttttgatt tttgatccaa attacttact gagaaaattt gcacataaat
    15841 acccgatgct aaaccacttg gatgtacagg tttagcatca acatttttaa ataaatcatt
    15901 tgcattttgt tcttttttag gggtttgttt tgcactttct ttttcttttt ttacagctgt
    15961 ttgttttttt gcttcttctt tagattttgc agtttgtgtt acttcttgtt taggagtact
    16021 tgcttgtgga gtggtatttg ctgaagtagt tgctgttggt tctgctggaa cttcttgatc
    16081 aggcatagca aaatttgtag tatcattgtt atttgaacta gaggttgttg tattttgagt
    16141 tgtattttgt tcatcttgaa attgttttct taatgcctca aattgatctt ctgctgaagt
    16201 attatctgta attggcatac tttcaaaaga agtatcattg ttattgtctt gagttgctat
    16261 aggttcactt ggcaatacac tttgattttg cgtattttca tcaccactac cattaataag
    16321 cttcataact atcataatag ctaaaaacaa aataactaaa gcaataactc gtaaaagaat
    16381 tttttttact ttttcacttt tattactttt ttctaaaata atatcatcaa attcattttt
    16441 ttgattttcc ataatttgtc ctttcttaca tatgcttaga ccaagaactt cctcgttctt
    16501 tttgataaac ctcataaggc aatattaaaa tattaaattc cctaggtaca tccatgctag
    16561 gaaacacctt ccattctact ggcattttac ttgcaaacat cattgaaagt ttagacgcta
    16621 aagaataacc ttcgtttaac gccgtatgtc ctttatgaat ataaagatgt aaatgtcctg
    16681 gagttttagt cttataggct gtgaaattta taaaaccttc ttctcttaaa ataagttgtg
    16741 cacggtgata aaatctttca gcattaaaac cattataatc aaagacaata ttttctactt
    16801 tattatcttt tgttattaaa tcatgagcga caacaatttt tttagcagcg tgttctctca
    16861 tgacatttaa atttaaagga gcatcaactc tttcaaattt atcaaaaaat aagcgacctc
    16921 tatgtgtaat tttatttaca attttatcgc gtcttatata ataatgatcg ccaattattt
    16981 taattagcga catatccatt ggtgaaatca aaacatagcc ctttcataaa taataaaatt
    17041 acttgcaagt ttttttaatt cttgtttaat attcttttgt aatttttcat tattaacatc
    17101 atctaaaata tctgcaatat aatttgacac aatttccatt tctttttctt taaaacctct
    17161 ggcagtaagg gctggagttc caagtcttaa tccacttgtg ataaaaggac ttctaatctc
    17221 tcctggaacg gtatttttat ttgcagtaat acctgcattt ccaagagcta aatctgcatc
    17281 ttttccgcta aactcacgat ctaaaaaact cattaaaaca aggtgattat ccgttccatc
    17341 gctaacaagt ttaaattttc tatccattaa aacattagct aaaacttgag cattggttct
    17401 tacttgtttt gcataaactt tccactcatc gctaagatta aatttaaatc ctactgcttt
    17461 tgcagcaatt acatgcatca aaggaccacc ttgaatacct ggaaaaatgg cagaattaat
    17521 ttttttagca agctcttcat catttgtcat aataatacca cctcttgggc cacgcaaagt
    17581 tttatgcgta gttgaactta ctacatgagc gtgtggaaaa ggacttggat gttcgcctgc
    17641 tacaacaaga cctgcaatat gtgctatatc agcaaaaaga taggcgccta cttcatcagc
    17701 aatttctcta aatttagcaa aatcaatcac tcttgcataa gcactagctc cacaaactat
    17761 taattttggc ttttcttttt tagcaatttc tcttactttt tcataatcaa ttcttccatc
    17821 aagttctacg ccgtaaaaac aactttcgta cattttaccc gaagaactta cttttgcacc
    17881 atgagttaaa tgtccaccat gacttaaatc cattcctaaa attttatcac ctggattaat
    17941 caaagccgca taaacacctt gattagcttg agaacctgaa ttaggctgaa cattagcaaa
    18001 tttacaatta aaaagttttt tacatctttc aatagctaga gtttcaatct catcaacaaa
    18061 ttcacaacca ccataatatc ttttacctgg ataaccttct gcgtatttgt tcgtcaagat
    18121 acttcccata acttccatta cttcaggtaa agtgaaattt tcactcgcta tcatttcaag
    18181 accttcgcat tgacgctcta actctttgtt tgttaaatca aaaatttctt tatcaaacat
    18241 ttctaaactc attctttctc ctttagttct gattttaatg gacgcattgc aggaaacaat
    18301 atcacatcac gaatggattt tttatttgtc aaaagcataa caagtctatc tatacctatg
    18361 ccctgccctg ccgttggagg cattccataa cccaaagcat ttacaaaatc ttcatccatt
    18421 tcacaagcct cttcatcgcc tgcattttta gcttcaattt gttttaaaaa tctctcatat
    18481 tgatcaagag gatcattaag ctcattaaaa ccatttgcca attctcttcc gcaaataaac
    18541 aactcaaatc tctcagcaat ctgagaatcc tcatcgctac gtcttgataa aggacttatg
    18601 gaaataggaa aatcaatcac aaaagtagga ttgatcaatt tttcttccac ataattgtca
    18661 aaaagttcag cttgcaaatg tccaagttca agcttttcat tcgcttcaaa accatctgct
    18721 tttaatttag taagaatttt ttccttatct tcgattaaat ccctatccaa accaccatat
    18781 ttacaaagtg catctttata ggttattctt tcaaaaggtt tggaaaaatt tatcattttt
    18841 ccatcaaatt ctattgtttt tcctaaatta agtttatcca aaagtaaagc aaaaagttct
    18901 tcggttaaat ccattaaatt tttataatta tgataggccc aataaaattc tatagttgta
    18961 aattcgggat tatgagttaa atccatacct tcgtttctaa aacaacgatt gatttcgaaa
    19021 accgcctcaa aaccacctac tataagtctt ttaagataaa gttctggagc aattcttaaa
    19081 aatctttcta cgcctaaaga attatgaaaa gttacaaaag gcttagcgtt tgctccacct
    19141 gcaatcggat gcatcatagg agtttctact tctaaaaagc ctttattttc aaaaaaatga
    19201 cggattaaac tcaccacttt agaacgcact aaaaaatctt ttctaacttc gacattcatt
    19261 atcatatcaa cataacgttt acgatatctt tgctcaatat ctgttaatcc atgatatttt
    19321 tcaggtaaag gaacaatagc ttttgtagcg agttttactt cgcttgcatg caaactaaat
    19381 tcacctgttt tagttacaaa aggaaaacct ttaaccaaaa caatatcacc cacctctaaa
    19441 ttctttttta aaatcgtata aagctcttcg cctacgctat ctttactaaa ataaatttgt
    19501 aaatttgtat cctcatcttc aatgtttgca aaaattgatt tcccagctat acgcaaaagt
    19561 ttcaaacgtc ctgcaacaac agcattgaca ctttcatctc ttttttcaac ttgctctaaa
    19621 atataagaaa atttatcctt aaaagtcttt aaagacattt ccttttctaa aaaatgagga
    19681 taaggattaa tccctaaatt ttttaactct ttagcttttt ctattctttg ctgctctaaa
    19741 atattatcaa acatttatat ttttaccttt gctttttgat tattacaatc accacaaaca
    19801 ccataaagct gcatcaaatg ccctgtaagt ttaaaaccat gttcttttgc aatcaaggct
    19861 tgctgtcttt ctataatagg attttcaaac tctataattt ttccgcaatt tttacatatc
    19921 atatgatcat ggtgaggttt attagcaagc tcatattttt tacctgctga accaaaagaa
    19981 atggaagtta ccatttctgc ttcttcaagt aaatttaaag tacgataaac agttgcaatt
    20041 cctacattta aatcaggttc agcttgtttg atttccatat ataaactttc gggtgtgtaa
    20101 tgagtatcac tgtgataaag agtttttaaa agtacttctc tttgcttggt atatttaagt
    20161 ccgccttgtc ttaatatttt tttaaatctc tcaagtaaaa catcatattc cacattttct
    20221 atcagcatat cactcccctt tttgagtatt gtttaaatca cttacaatat cttgcaactt
    20281 ttcactagca tgatctagac tattttctgt taaaggttga ttcataataa aagatcccgt
    20341 ttctttaagt aaatttaaag tatagctatt tttagcaaaa ttatctaatt tatcatttaa
    20401 aaaatcaatt cttgccacac aaaaaaccaa aattgcaaaa attaaaaaga tttttgctcc
    20461 accaaatata aagccaccaa tacgatctaa aaaacctagg ccacttaatt taatcaacct
    20521 agaaagaaaa ttactcacca ataaacaaac tatccaaaaa ataattaata tggctaaaaa
    20581 tccagcaaat ccagctaagc tttgattttc tatcttataa aaagtacttt gtataaattc
    20641 agctgcttga gttgcatatt gtgaagcaat aaaaacacca ccaataatac ccaaaagtcc
    20701 aaaaatttct tttatcaaac cattgataat acccttaagc cctaaaagca aggtaaatcc
    20761 taaaataaaa gcatcaaacc aataaaaatt catttcaatc actctctgat tttttgtttt
    20821 aaatttattc tacaaataag cactaaatgc taagttaatc attctatgat tttaggaaca
    20881 acaaaaaaat gttcttgttt ttttggagca caatctaaaa cctcatcaat aacattgcta
    20941 tttcttatct catcaatcct caaaggagct ccacctttta tagtactcac agtaatctct
    21001 tgggaatcta aatcaagttc gtttaatttt tcaacaaaat tcacaatttc acttaactgt
    21061 gcaatggttt catttctgtt ttttgttatt tgtaaagcac ttaatttttc aagcttgctt
    21121 aataatttct catctatttg catttcttaa accttaataa aaaagttaaa attttgaaaa
    21181 ttatatcata aaaagcttta aattgtttag gatattttgc aatttatatg atacaatatc
    21241 ataatttttc tatacaaaaa ataaaaatat tttttcaagg ataaattttg ggactaaaag
    21301 ataatttaaa agctgttaaa aatgaactta acacggaaga acaatttata gaaaatttta
    21361 tcaaaggaga gaggtttata cgcaagtata aattttatat atctgctgtt gtgataattt
    21421 tagttgcttg gtttgctgga aattttataa tctcaaaaat aaacgattat aaaacaaaag
    21481 aagcaaatga aatttatgcc aatctaatac aagatcctag caataaaaat cttttagaac
    21541 aacttaaaaa taaaaatacc aatctttacg ctatcttttt actaaaagaa aatattaatg
    21601 attttaataa tacagctctc caaaatgaac taaaacaaat ttacagtaat actcaaacaa
    21661 acactttact taaaaatatt attgcattat ctttaggaga taaatcaata tttttaaaaa
    21721 attatgataa attattagaa gcttacaaac ttttagagca aaataaaatc gaagaagcta
    21781 atgttttact ttctcagata aaagaaaatt caagtttaaa tcaaatagct aaaaacctca
    21841 aacattatca aggcattaca caatgaaaaa aatattttta acactatttt gtttaatatt
    21901 tctatgtgct tgtggcacca aaagacaata ttttgaacca aaacaaaccg atggagattt
    21961 aagtcataat agcaatttaa aaagtaaaat cgttgattgg aatctagttt ctgcaaaact
    22021 tagcaataat acagctatct taaaaaataa tatctccata gacaagttta aacttcctaa
    22081 aaattatatg cttctagctt atcaagatgg ggaatatttt actgcagata ataatggaaa
    22141 tttaaaaatt tttgacaatt cttataatga aatttataat tttcaatttg acgctagtgt
    22201 tgtaggagta gcttctaatg gagatgattt agcccttgta cttgcaaaca atactatagt
    22261 tcttgcaaat cgttctttgg gtattaaatt tagtcaaacc ctaacctcag ctccagctca
    22321 agacagtcgt accgctaatc ctatattttt agacaatatc atcgtatatc caacgctaga
    22381 tggcaaaatt ttaattcttt caagaagcaa tcttcaagtc attaaagatg tggttatttc
    22441 agcagaaaat tttttcaaca atgtaatcca tctaagtgta atcggagata aacttatagc
    22501 agcaacagct aaaaaaatca ttgttgtaag ccctgctaga actctttatc ttgacgctga
    22561 cataaaagat gttgcactta gtgatgatgg tatttttata ctagaaaaag atggcactat
    22621 tattaaaact gattataact taagaaaaat tgcagaaaaa aaatttgaat ttgctatttt
    22681 tgtaaaaagc aatatataca ataattattt atatattttt gaaaaaacag gctatcttat
    22741 caaaatgaat ctaaatttag ataatacaca agtatttaaa ctttcagaag ctgttgataa
    22801 aatttctttc atggggaatg gtaaatttta ctacggagat aaaattttag atttgctatg
    22861 ataaaaattt tagaacaaac aataaagtct ttaaaattaa atttaaagcc ctatgactta
    22921 agtatgttga ctagaaaaaa aagttatatt tgtgctaaag atcaaaataa cattcttttt
    22981 atgtatacag gaaaaacaaa atttttaatg aaagatgcct tatttttaga aaatctagca
    23041 cagcaaatta acataaataa caaatatttt tttagtatgg cttctctttg ctctaaagca
    23101 aaaaatcatc tagaaatgaa aggatttaat atctatgttg ctctgtgata ttgggaattc
    23161 aaatgctaat ttcctagatg ataacaaata ttttactctt agtatagatc agtttttaga
    23221 atttaaaaat gaacaaaaaa ttttttatat caatgtcaat gaacatctca aagaacattt
    23281 aaaaaatcaa aaaaatttta tcaatcttga accttatttt ttatttgata caatttatca
    23341 aggattagga atcgatcgca tagcagcttg ttatactatt gaagatgggg ttgttgtaga
    23401 tgcaggtagt gctattacaa ttgatattat ttctaattct atacatcttg gtggttttat
    23461 cttgccaggt attgcaaatt ataaaaaaat ttatagccat atttcaccgc gattaaaaag
    23521 tgaatttaat actcaagtta gtcttgatgc attcccgcaa aaaaccatgg atgctttaag
    23581 ttatggtgtt tttaaaggaa tttacctact gataaaagat gccgctcaaa ataaaaagct
    23641 ttatttcact ggtggagatg ggcaattttt agcaaattat ttcgatcacg caatttatga
    23701 taaactttta atctttcgag gaatgaaaaa gattataaaa gaaaatccca atttacttta
    23761 ttaaaaatgt tacaaaaatt ctcattgata tcaaacctta atgaaattta actttttgta
    23821 aaacaaattc aattaaactt ctatttagaa aaaagtttat taaaataaaa aaaggaaaaa
    23881 caatgagcca acaagaattt gatgtgcttg tcatcggagc tggaatttca ggagcagcat
    23941 tattttacga gcttgcaaga tatacaaata ttaaaaatat tgctttgata gaaaaatata
    24001 atacagctgc aacattaaat tctaagggaa cgagtaattc tcaaaccatt cattgtggag
    24061 atattgaaac caattatact ttagaaaaag cgcgaaaagt aaaaagaaca gctgatatga
    24121 tagttaaata tggactcatg caaaatgcgc aaaataattt catgttttct catcaaaaaa
    24181 tggctctagc tgttggagat atagaatgtg attatatgaa aaaacgctat gaagaattta
    24241 aagaacttta tccttatata aaatttttca ataaaacaaa aatcaaacaa attgaaccca
    24301 aagttgtttt aggagaagat tgcaatcaag atagacctga aaatatctgc gccatgggtg
    24361 ttgaaagtgg cgaggttttt acaactgtag attttgggaa aatgagtata aatctaatag
    24421 aacaagcgca aaaacaaaat aaaaatactt tcgttgcctt taatcaagaa attattcaca
    24481 tagaaaaaaa agatgatatt tttatattaa aaacctcaaa tcatcaagaa taccatgcca
    24541 aaagcgtagt tgtcaatgct ggggcgcact ctttatattt agcacataaa atgaacttag
    24601 gtatggataa gtcttgttgg cctgttgcag gaagttttta tttaaccaaa caaaaacttt
    24661 taaatggcaa ggtttatatg gtgcaaaatc ctaaacttcc atttgcagct cttcatggag
    24721 atcctgattt gcttgctgat atgaacactc gctttggacc tactgcactt gttattccaa
    24781 aactagaacg ttatcatggt ctaaaatcag ttccagaatt ttttgaagca ctaaaacttg
    24841 ataaaactgt tttaaaagta acttttaata tgtttaaaga tgcaacaatt agaaattaca
    24901 tcttttataa ttatcttttt gaattacctt ttattgataa aagcttattt gttaaagatg
    24961 ccaaaaaaat agtcccaagt cttaaagcaa gcgatattta ttatgcaaaa ggttttggag
    25021 gcgtaagacc acaagttatt gataaaacta aagaagaatt aatgctaggt gaagcaagca
    25081 tcacagaaac ccctggtatt attttcaata tgactccaag tcctggagca acaagttgtt
    25141 taggaaatgc tgaaagagat gcaaagcttg tatgtaatta cctaggaatg gaatttaacg
    25201 aagataaatt ttcttcagaa ttattgtaat cattttgttt ctatttttag ctacaataat
    25261 ttcaaaagga gtttatcatg cttaaaaaaa caaaaattgt agccacagta ggtccagcaa
    25321 gtgaaaagga agaaattcta cgccaaatga ttatcaatgg tgtaaatgtt ttccgtttaa
    25381 acttttctca tggaacacat gagtatcata aaaaaaactt agataccata agaaaagtag
    25441 ctaaagaatt gcatattcgt attggaattt tacaagacat tagtggtcct aaaattcgta
    25501 caggtgaact taaagaacca tttgaattaa aaaagggtga tagacttgat ttttatcgtg
    25561 aaacaatttt aggggagaag attgctcaaa atcattataa aatcagtatt aatcaaaaat
    25621 ctattttaga tatgttaaaa attgatgaat atatttatct atatgatgga tcaattcgtg
    25681 ctaaagtagt aaacatagat gatcaaaaaa ttgaaaccat tatagaaaat gatggttttt
    25741 taaactcaaa taaaggtatt aattttccga atactaaaat caatattgat gttattacac
    25801 aaaaagataa aaatgattta ctttggggta taaaaaatga agtagatttt ttagcaatat
    25861 ctttcgtaca aaatgcacac gatattgatg aagttcgtga aattttagca caaaataacg
    25921 caaaaatatc tatttttgca aaaattgaaa aatttgatgc agtagaaaat attgatgaga
    25981 ttattaaatc tagcgatggt ataatggttg caagaggaga cttaggtatt gaggtacctt
    26041 attataaagt tcctaatatc caaaaagaaa tcatacaaaa agcaaacaat gcctctaagc
    26101 ctgttattac tgcgactcag atgctttttt cattagccaa aagcaaaacc gccacaagag
    26161 ctgaaatttc agatgttgca aatgctgttt tagatggaac agatgcagta atgctaagtg
    26221 aagaaagtgc cgttggtata gatcctgcaa acgctgttga tataatgtgc caaactataa
    26281 tagaaacaga aaaacgctat ccatataaca aatttaatga ttttaatgat ttagacaata
    26341 cagataaaat catgcgttct tcagctcatc ttgcaacaga tcttaacgct gatgctattt
    26401 tttctttaac aagtagcgga aaatctgcta ttaagattgc gagatatcgt ccaaatatag
    26461 aaatcatagc agtagggcat tctgaaaaaa ccttaaactc tttaagtata gtttggggag
    26521 ttaatcctgc gatcttggtt aacaaaagta atgagcttac agaattatta aaagactctg
    26581 taagatcaag tgttgaaaaa ggttttatgg atgaagataa atgctatctt ctaactgcag
    26641 gctttccaac aggagtagaa ggtactagca atcttatccg cattctcaat aaagagcaaa
    26701 ttgcttatta tctacaataa aacattaaat tcctttgaaa ataaggaatt taatgtcctt
    26761 ataaattttt taagtcaaaa gtcgatataa attaaagcct cacacaaagg agcaaatatg
    26821 caagtgaata ctttttcaaa tatcgctagc atggcacaaa cacaagttag caataagaag
    26881 gcagatgatg ctaaggaaaa cacaaaagac aaaaatgttc aaagtgctaa ttctagcaag
    26941 gatgtagata aaaataccct tgaaaaatta aatgcacttg gtggaaaagg cattacacaa
    27001 atttacctag ttcagtttca acagcaaaca atgaatgctg taataggttc gagcaatgcc
    27061 caaactggac tagatagtct tttaaatggt gccaatttag atactgcgaa atctatactt
    27121 acaaatattg attttgcatc cttaggctac agtggcaaaa atccacttga tatgaataca
    27181 gatgaacttc aacaacttgt aagtgaagat ggtttttttg gagtggaaaa tacagccaat
    27241 cgcatcgcgg attttgttat taaaggcggt ggcgatgatg ttgaaaaatt gaaaaaaggt
    27301 cttgaaggca tgaaaaaagg atttgagcaa gcagaaaaaa tgtggggtgg agaacttcct
    27361 caaatcagtc aagatacaat agatgcggca cttaaaaaag ttagcgatcg catcgatgaa
    27421 ctaggcggaa aaactctaga tcttcaagct taactaaaaa tgcttagaaa tttctaagca
    27481 tttttagttg ttattaatat caaaagtaaa aaattcactc ttaaaattat taggtaaagt
    27541 tttatactga gatatcgcag cttcatagtt ctttacttct tgatacaaca taccaagagc
    27601 tgctttactc tctttgttat ttttatctgt aagtttagaa agctgcaaaa gcgctatagc
    27661 tgaatttgga ttatttgcac ctacggctgc tacggctgct aaaaataaag ttttagtatc
    27721 tttagctcca taatcatcaa tcaaagaatt ataaagcgca taagcctcct cgtattgctg
    27781 tgcaaaaata tccaaataag ctaaagtttg taaaataccc tcatcttttg ctcctgaaac
    27841 attaatcaac tctttaaatt tctgtctttc taaatttaaa agccctgcaa tatgcattaa
    27901 attaacataa aattccctag ctatatttgg cccaccaaaa acactacgat aatcaagttt
    27961 taaattttta aaatgaattt gagcattttg agcatattct ttaatattta aatttgaatt
    28021 taaagaatta aaatacaaaa tatttgccaa aatatcttca ggcaactctg aacgcaattt
    28081 agcaattttc acatctactt gattattaag attattattt ttagcaacaa tagctttaaa
    28141 aatcaaactc aaaggcgtat ctttttttgt ttcatctaaa taaggaagca tagaaatata
    28201 attattatta actaaaaata acatactttt ttgcatatta gctttaaaat tagaatcagc
    28261 agctatatta tcaagaattt cattgtaaag tttagttgta tcaatatcaa ttaattttgc
    28321 acaaaacata gcaaaagcac ctgctaagta atttttagga ttaagatgat atgaacttga
    28381 aaaatgctta taagcaagtt cataattttg catttgggca taagttaaag ccaaattata
    28441 atgtaaaata ctatgttctg gataatcctt gataagtttt tgaaattctt ggttagcaag
    28501 gcgtaacttc tgatttaatg catagttaat aatattggca atttttacat tggtagatga
    28561 aagagccttg cttatattaa gataaattcc cgcatcagta ctatcatcaa cgaaatctgt
    28621 aacattagct tttttaatat ataaagcagc ctgcttacta tcaaaaacct gataaggtgc
    28681 aaaataaaaa agcaaatcga attgatcttt ttgttttttt agcaaatctt ttgaaaaaga
    28741 attttgagca actgctatat taaaaagatc cttatttaaa cgaacttgaa ttttataagt
    28801 atctaaaatc ttatatctat ctttatcgtt atcataagaa ttttgcaagc gcgctaacat
    28861 atcttgataa tttcctgttt taatatcaac caatgttaaa gccgccaaac tctgattaaa
    28921 atctctttca attttcatcg ctgtacttaa agcgacttta gctttagcat attctcctat
    28981 tctagcgtat aaaagaccta aagataaact agattcaaaa ttgccttgag aatttaattg
    29041 ctgtatagcc ttggaatcaa agtccatttt tgcataaatt ttagcagaca aatactttgc
    29101 aacatcagaa tacggctcca catctgttct ttgtaacatt tgtaaggcct cagggtaata
    29161 tcctttgtaa taattaatca agcttaaata ataatcatat aattttgatt ttccttcttt
    29221 tggaagatac acttgagcta aatcaatata atatctaaat ttttccttat cattaagctt
    29281 taaagcacaa acagcagcat tgatagcagc tacactttga ttttctccat tagctatagc
    29341 tttcttgaag ctttcaaaag cttcttggaa tttattctca ttcatttgag aaacgcctaa
    29401 attataatta gataaagatt cattatatac ggcaacttgc tcataaactt ttaaagcctg
    29461 ttcaacctca ccctttaaat ataaagcatt tgctttttgg atcataccat caattctttg
    29521 catatcattg tatttatatg attcatcagg cataataaca ggttgttcta aaggcttaga
    29581 agctataata tctggtttaa tttttccttc actaaaagtt aaataaaaaa gtgtaaaaac
    29641 taaaatacaa ataatcccca aagataaacc cacaagagac ataaacttac gatctttata
    29701 ccaaggcgta ggctcttgac tttcaacttc ttcaaaagtt gatacatctt caggcgcact
    29761 ttctcttgta aatttaaaac cactttcact attttcttga ggtaattctt ctggcaatga
    29821 tgcaaattct tcatcttctg gagcttgccc ctcttgccct ttaaatccct ctaaactctc
    29881 atcaagtctt ggttgattta agccatcttc gggtttttct agtattatat cttcttgttc
    29941 agccatctat actctttaaa aatatttttt caaaacatca ggaatatgaa tttttccttc
    30001 tttatcttga taattttcca taatcgctac caaggttctt cctactgcca aagatgagcc
    30061 attaagagtg tggacgagtt cattttttcc ttgttcgttt ttatagcgaa ttttagcgcg
    30121 tcttgcttga aaatcacgac aatttgaaac cgagctgatc tcacgatatt tattttgtcc
    30181 tggaagccac acttcaagat ctacagtttt tgctgcacta aaacccaaat ctccagtgca
    30241 aagcatcaaa tgtctatgcg ctaaacctaa agaactcagc aaatcacttg cacactcaag
    30301 catttcatta aacacactat cactttgctc aggtttagtg atacttacaa gctctacttt
    30361 ttcaaactgg tgttgtctta taatacccct tgtatcacgc cctgcactgc ctgcttcttt
    30421 tctaaaacaa gcgctataac aagtcatttt tataggtaaa gtttcactcg ctaaaatttc
    30481 tccgctgtaa agattggtta ctggaatttc agaagttgag atcaaataca aatcctcatc
    30541 atctacctta tacatatctt ctttaaattt tggcaactga cccgtcccaa acatagtagc
    30601 accatttacc aaaaaaggta cattaacaaa ttcaaatcca cgacttctat taaaatctat
    30661 catataattt accaaagcac ggcttaataa agctccttca tttttaagca cacaaaaacg
    30721 actttgtgaa atttttaccc cacgcataaa atcaagccaa tttaaactct cgcctaattc
    30781 aaaatgttct tttggagtaa aatcaaaact aggtggattt aaaacttttt taagctccac
    30841 attttcattt tcgtcttcac ccgcaggcac acattcatca gggatatttg ggatggcatg
    30901 agcgatttct tcaagctcat tttctaaagc atttacttta gtgctttgct cattaatttt
    30961 acttttattt tcgcttaatt ttgcttttaa actttcttta tcttcggctg tagcaagttc
    31021 tttactgaat ttattttgaa aagcttgaaa ttcttctaaa gctgtttttt ctttttttaa
    31081 acttgcaaaa agttcagcaa gtttttttaa gatattttca tcaacttttt tattttttaa
    31141 ctttttagcc acttcatcaa aattattttg caaatttttt aaatctagca ttttctactc
    31201 cttaaagtcc gattttttca taaatttttt gcattttttc ttgggcgatt tttcttgctt
    31261 ttgtcgcacc aaaatccaaa atttctttca aatgcgaagg cttttctaaa agctcattat
    31321 atttttctct tgcttcttta aaataagcat ttacaagctc gtttaaatat attttaaaat
    31381 gtccataacc ctcaccacct ttttcatagc gtatttgtaa ttctttttgc cctgattcat
    31441 ctaaaaaaag ctttgcgatt ttaaaaatat tgcagttttc atgatctttt ggatcttcta
    31501 aagcggtact atctgtaact atagaagaaa tttgtttttt taaggttttt tcactgctaa
    31561 aaatatctat agtattttga taagatttac tcatttttgc tccatcagta cccacaacca
    31621 cagctacttc ttcattaact ctcgcttctg gaagggtaaa aatttcaccc cattcattat
    31681 taacttttaa agcaatatcg cgtgcgattt caacatgctg gatttgatct tttcctacag
    31741 ggacaattcg tgtatcaaaa agtaaaatat ctgccgccat taaaacagga taagaaaaaa
    31801 gcccatgtga agcactaagt cccttagcaa ctttatcctt gtaactatgt gcacgctcta
    31861 ataaacccat aggagtaaat tgcgataaaa tccaataaag ctccataact tccttaacat
    31921 cactttgcaa ccaaaaaacg cttttttgag gatctatacc aaggcttaaa aaagccgcag
    31981 cagcttttaa ggaattttgt ttaagttttt ctccatcttg agaagaagtc atggcatgat
    32041 aattagcaat aaacataaac atttggcttt tttcttgtgc atctaccatt tgcttaatcg
    32101 caccaaaata attacctata tgcaaatcgc cacttggctg aaggcctgtt aatactctca
    32161 ttttatcacc tttttaatct cgcttaaaag ctcatctata tttttatttt ctatatttaa
    32221 aataaaattt gccttttgtt catacttgct taaacgctca ttatataatt tttttgcttt
    32281 aatttcatca taaaataaag gtcttttaga aatttcatct ttgtctaaac gcttttttaa
    32341 atattcaaaa tctgctttta aataaataca aaaacctgct ttttctaaat ttgaaacatt
    32401 aacaaaaccc ccacctgtag caatacaagc tttctcacaa gaactaaaaa aatcagccat
    32461 tttttgctct tgttctctaa aaaaattttc ccttttttgt tcaaaaattt cactgacttt
    32521 ttgattaaat ttttgttcta ttaaaaaatc actatctaaa aaaacaagat ctaaatcctt
    32581 agctaaagct cttgctaaag tgctttttcc agaacccata aatcctataa aaacgatatt
    32641 tttagctttc atcattttct ttactgccct ttttacgcga agcaatcact aaaggcacac
    32701 cttcaaaatt aaattctttt ctgatttgat tttgtaaata acgcttatag ctaaaatgca
    32761 aggccttagg acgattcata ataagtgcaa tttttggcgg tgctaagtca tattgtactg
    32821 cataataaat tttaaccaat ttcccataat catgcggcaa aggatgtgct cttgtggcat
    32881 tttctatcaa ggtattaagc ttagaagttt ggattttttg agtgaaattt tcaaaaattt
    32941 gcaaaatttt atcgagtaaa acatgcaccc tttttccact taaagctgat acgctaatca
    33001 cgggtgcgta agctagaaat ttaaaacgat caagacgcaa ttcttttaca gtcttatcaa
    33061 aatccatctc acttttatcc catttattta aaacaataat cacacccaaa taatgcttag
    33121 ccacaagccc agcaatgcgt tcatcaagct cgttaaagcc ctcatgcgca tctaaaacca
    33181 aaagtgctat ttgagaatga gataaaattt tttccgtgcg atttagggca aagcgttcga
    33241 gtccttgaat tttacccctt tttctaatac ctgcagtatc aacaaattct atcactttat
    33301 ctttatgaac tacactttca ttaacaggat ctatagtagt tcctgcaata gaacttacaa
    33361 cactgcgttc ttgtttaacc aaagcattta aaagacttga ttttccaaca tttacacgcc
    33421 ctacaatacc cactctgata tgattttgat cgacttcttt aaattgaaat tcttttcctt
    33481 cttcataata ctctaaaaaa tcttctaaat tttcttcttc atcggggatt aaaaactctt
    33541 catgtaaaaa tttttcaagc cattcataaa gttcatctaa gcctacatta tgggttactg
    33601 aaagattaaa gatttccttt acgccaaaat ttgcaaactc ccaagccctt tcttcatctt
    33661 ttttattatc tactttatta atcactaagg ctataggttt tccaagtttt tttaaagaat
    33721 aaaaaaactg tctatcctca tcatcaggcg ctaatttccc atcaactaga taaagtatga
    33781 tatcgctttc tttagctact tttaaagtgt tttttttcac atttttaaaa agttcatcac
    33841 tttcatcaag ccctccacta tcaataagca tggctttttt tgaatgaata tgaatttgcg
    33901 ttttatttgt atctctagtt gtgcctgaaa tatcacttgt aatagctatt ctttgtcttg
    33961 ccattctatt aaaaaggctt gattttccca catttggctt acctataagt ataatgcttt
    34021 gcattttttt cctagaaaat tatattttta aaattatata aaatttggct taatattaag
    34081 caaaaaaaga ctagaattaa cccagatttt agtcaaggaa aaaaaatgct aaaagtaatc
    34141 aagcataatt taggaattta tttcatgatt ttagcatgtt tggattttgc acttatggga
    34201 gcttgtgcaa aaattcttag caaggaaatg agttctatag aaattatgtt ttttagaaat
    34261 atcataggaa tttttttcat agtctatctt ttaaaacgat ctaaggcaca taaagaaggg
    34321 ggatattttt ggctcttggt atttcgtgga gtagtaggca cgctttcact atatatgttt
    34381 ttctataatg tttcaaatat tacactaggt ggagcttttg cttttcaaaa aactgctcct
    34441 atttttatta ctttaatagc ttttgttgtt tttaaagaaa atattggcat caaaggctgg
    34501 ataggaattt taatagcatt tggtggagtg cttttaatcg ctcagccttg ggctcataat
    34561 ttaaatcatt caggctttga tttaaaaaat tcagttatag gtatcacgag tggattttta
    34621 gccgctttag ctcttacaag tgtaagagaa cttagaaaat cttacactac agaacaaatt
    34681 gccttttctt ttatcctttt aggaacctta atgcctttaa tttctatgat cagtgctgaa
    34741 ttttttgaac cacagcatct tgattcttta catttagatt tcattctagc accttttgtg
    34801 atgccaagtc ttacagcttg gcttatcatt gccattatgg gaactttagg caccatttat
    34861 caaattcatg tcactaaagc ttatggtatc gctaaacaag caggagtggt tgccggagtt
    34921 agttatcttg atgtagtatt tagtatgata gttgggataa ttttgggaga taatttacca
    34981 agcactatgg tttttttagg tataataggc attatttttg gtggattaat tttagttaag
    35041 aacaaaggaa aaaaatgaaa aaaatgatac tcattgctgg tccttgcgtg atagaaagca
    35101 aagatttgat ttttaaagtt gctgaacagt taaaaaattt taatgaaaat ccaaatatag
    35161 aattttattt caaatcaagt tttgataagg ccaatcgcac aagtattaat tcttttcgag
    35221 gtcctggtct tgaagaagga ttaaaaattt tacaaagcgt aaaagatgaa tttggtatga
    35281 aaatcttaac cgatatacac gaaagcaatc aagcaaaccc tgtaagtgaa gtagctgatg
    35341 tcttgcaaat tcctgctttt ttatgtcgtc aaaccgattt acttgtagcc gcagcaaaaa
    35401 ctaaggcaaa aattaatatc aaaaaaggac aatttttaaa cccaagcgat atcaaataca
    35461 gcgttaaaaa agttctacaa acccgtggta tagaagatga aggctatgaa gctgctcaaa
    35521 gaaatggtgt ttttgtagct gaaagagggg ctagctttgg ctatggaaat ttagtagtag
    35581 atatgcgttc tttagttatc atgcgtgaat ttgctccagt tatttttgat gctacccata
    35641 gcgtacaaat gccaggggct gcaggtggaa gtagcggagg gaaaagcgaa tttgtagaac
    35701 ctttagcaag agcggcagca gccgtaggca tagatggctt tttctttgaa acacatatta
    35761 atccttgcga ggctttatgc gatggaccta atatgcttaa tcttacacgc cttaaaaatt
    35821 gcgttaatac attactagaa atacaaaata tcataaagga aaacaaatga atattattga
    35881 aggaaaatta aatttagact caaatacaaa aattgctatc attaatgcaa gatttaatca
    35941 tatcatcaca gatcgccttg tagaaggagc aaaagatgct tttttaagac acgggggcaa
    36001 agaggaaaat ctaagcctta tacttgttcc tggtgctttt gaacttccgt atgcgttaaa
    36061 aaaagctata gaaagcaaaa aatttgatgc aatttgttgc gtaggcgcag taattcgtgg
    36121 ctcaactccg cattttgact atgtttcagc agaaaccacc aaaggcatag ccaatgtgag
    36181 tttaaatcat aatatccctg taagctttgg tgttttaact acagatacaa tagaacaagc
    36241 catagaaaga gctggaagca aagcaggcaa taaaggcttt gaagctatga caactgtaat
    36301 cgagatgtta aatttaagca aggagcttta atggcaacgc gtcatcaagt tcgccaaagc
    36361 gtcatctcct tactttatgc ttttgaatta aattctcaaa acaacgtttt tgtagatgaa
    36421 attttagatg aaaaaaaaat acgcaatgaa caaaaaaatt ttactttaaa tttatataat
    36481 ggaattttag ataatttaaa caatattgat gaaaccttaa attcatttct aaatgataat
    36541 caaattacag ctttaggaca tgtagaaaga gctatactaa gacttggagc ttatgagtta
    36601 ctttttaccg atactcctag cgccattgtt atcaatgagg ctatagaact tgccaaagaa
    36661 cttgccaatg acaattctcc aaaatttata aatggagttt tagatgcctt aataaaggct
    36721 aaaaaatgaa gctttgtgtt gcacttgatc tttctacaaa agaagaatgc ttgcaacttg
    36781 ccaaagaatt aaaaaattta gacatatggt taaaagtagg tttaagagca tatttaagag
    36841 atggctttaa attcatagaa gaacttaaaa aagttgatga ttttaaaata tttcttgatc
    36901 ttaaaattca tgatattccc aacactatgg cagatgcttg cgaagaaata tcaaaacttg
    36961 gtgttgatat gatcaatatc cacgcaagtg ctggaaaaat agccatgcaa gaagttatga
    37021 cacggcttag caaattttca aaaagacctt tagttttagc agtttctgct cttacgagtt
    37081 ttgatgaaga aaatttcttt agtatttata gacaaaaaat cgaagaagct gtaattaatt
    37141 tttcaaaaat atcctatgaa aatggacttg atggtatggt atgctctgtt tttgaaagta
    37201 aaaaaattaa agagcacaca agttcaaatt tcttaaccct tactcctgga attcgtcctt
    37261 ttggagaaac aagtgatgat caaaaacgtg ttgctaatct tgcaatggct agagaaaatt
    37321 tgagtgatta tatcgttgtg ggaaggccta tatataaaaa tgaaaatcct agggctgtat
    37381 gtgaaaaaat tttaaacaaa atacatagaa aaaatataag cgaaaacgat atagagcaaa
    37441 attatgaagt aattcagcaa aaagaatggg atatgtgtaa tcactttgaa gaatggatta
    37501 aaactcagcc tgataaagaa catgctttaa aagaatttta tgctaagtgt gggataaaat
    37561 attgaattat caacaattag aatgcgatta ctttaatctt tacaatcagt ttcttagcgt
    37621 ggattttcaa atttcattat ttgaaaaaga tcataaaggt ttaattaaag attttatatt
    37681 tttttattat caaattttaa aacaaaaaga cttgagctac ttgcttgagg taagaaataa
    37741 aatttccctg aaagtttata attatatgca agagcactcc acttctccaa aagatttaag
    37801 tcttatttgt ctaagagaaa ataaacatat tgaatttttt caaatatttt acaaggctct
    37861 cgcttatttt gtagccttta gaaaaaaact tgatggagaa caaaaaatta aaaatttgat
    37921 ttcaaatatc aatgactgtt ttggctatca tttcttgaat tctgacttta acaatcttca
    37981 aaattttcaa aaaagcgatt tgttcacctt acctgaaaaa catcttaaat attttcactt
    38041 cgccatgatt catctttgtt tcatggtttt aaatccttta aattttaaag actctaatcg
    38101 gcatcttgat aaagcgatta attatcttgt cgatggaact tttgaaattt atgagctcat
    38161 ctttaaagaa tattttttat tgttttcaaa agataaag
//
LOCUS       DAPIWB010000006        37173 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.006, whole genome shotgun sequence.
ACCESSION   DAPIWB010000006 DAPIWB010000000
VERSION     DAPIWB010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 37173)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37173)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37173
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.006"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            55..1371
                     /locus_tag="RJ266_000250"
     CDS             55..1371
                     /locus_tag="RJ266_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HDV7354034.1"
                     /translation="MAKKQLSLTRLSFPIFWDLLSKYLTVIINTAMVSHYSNFLVGAM
                     GAGNQILDLFITIFSFLSVGCSVVIAQAIGAKDHVLARKVIHQSLFLNALLGFVCGVL
                     ILWHGEYLLYLLKIPQELLKDSEIYLHMLAICLFFDAIGIVLAAIVRVYNMAYWVMFI
                     GFLMDIVVICGNYYVLHYTKSELFGIGLSNIFARIVAIVALFAILFYKLKIHLKIKEM
                     IKLEKEVLKKVLNIGGFSAGENLLWIVQYTIAFAFVASLGEASLSVQTIYFQISMLIM
                     LIGQATSIANEIIVGKLIGARYENIAYKHAWRALYFSVIASALVAFLNYLCQDFTMQI
                     LGLKEELKNLMIPLFALSIFLEISRTFNIVMVNSLRASGDAKFPFFSGLVFMMGVSLP
                     VGYVLCFHFNLGILGVWIGFCADEFLRGMVNSYRWKSKKWQGKALV"
     gene            1347..1994
                     /locus_tag="RJ266_000251"
     CDS             1347..1994
                     /locus_tag="RJ266_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDV7354035.1"
                     /translation="MARQSSSLKSFIYKDECYFYSKKCIKTLRLRLNEKGEFVLSIPY
                     FCTFKSVYEFLDKSSSWMNEAKKRFEKKALKDDELIFLAKKYQIIFDENAKKIYFDKD
                     KIICQNKAKLDLFLRQNAKKIFTFYLKKWSKKTGLFYTHLSIKNMKTRWGSCNHNKAY
                     INLNLKLIQKSLRAIEYVILHEISHLKFPNHSKEFYTFIEHFMSDFRQREKEFLS"
     gene            2036..3556
                     /locus_tag="RJ266_000252"
     CDS             2036..3556
                     /locus_tag="RJ266_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354036.1"
                     /translation="MTLDFDFIYNADNDIFEYLLRFYAKNYNYILSKEENTYHFSIDA
                     DEENLKTFCDSLNFMSHSVFLKKFDVKAGHGFNPCMPEDKEFSRFSYITHLNSNAYQE
                     KKLLNKNEWGVFCECEFSSNLSEFEKINEENFNTFLNLAFDLLSQEKKIYLKDKNGIY
                     EFSLFKNEFIGDFLLPCDIKAINSVFVCSNENLKLLASLEKPLMKLRLNAMFRKNHNL
                     DFSDFKIRLARDLFCFALGLKLFENEYKFLSVKKIEEYQKDFYISALDEQVVVLEGFE
                     FINAKARELIFSKEDKNMARISYLVSRYKEKAFILELSKDYEDILLINKELNLLKLCL
                     PKHSKELYEEIKKDEIGARLLENFNKEFPLLDENFELQNNFYSLLGLLGRVLNLGRNL
                     QESASELLKIADESKMPRGVKIDYRLKEDKSFDYTRTLRSAMSFMLAGVDSANIAYGA
                     VESLAYFLRDTYDELREKKQSDLALISGSLFEHKSLLKNTLKHLKNCQLSDVPLRI"
     gene            3537..5726
                     /gene="hypF"
                     /locus_tag="RJ266_000253"
     CDS             3537..5726
                     /gene="hypF"
                     /locus_tag="RJ266_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HDV7354037.1"
                     /translation="MCHLGYKIKISGLVQGVGFRPLVYELALKSKLFGEVRNDGFGVE
                     IILACTQKECQNFIENLKNHLPPLARIDQLIITQISISNYENFSITPSLENTKSTPML
                     SDFALCKECKKEFFDEKNPRFLYPFITCTHCGPRFSIIKSLPYDRTHTSMQELLMCEF
                     CKSEYEDPKNRRFHAQPISCPKCKINVFLKNPKGEILAKDQEAFIQSAKFLKEGKILA
                     IKGMGGFHLMCDAFNEEALKTLRLRKNRPKKPFALMCKDLQSAKELAFIDEKEEALLG
                     GVLAPIVILKAKKAFSLIAPDVDKIGIMLAYTPLHLLLFEYFKGSLVATSANLSGESI
                     IKDEFNLRQKLDKVFDFYLDYDREIINASDDSIAQVVNGKTMFLRTSRGLNPFYLERN
                     FNKKGTFLALGAELKNEFVIFYENKLLISPYIGDLKSLDVHERFFKLLEFFKQNYDLK
                     FDAILCDKHPHFSYAKEFEERIKISHHYAHFCAAYFEYEENFAKDEKALAFICDGTGY
                     GEDGKIWGGEVFVGNLKEYERIAHFENFTLINSDIKNIQNLALSLIFHYDLEDKAKEF
                     LAKIPKIKLENLKKIYSQSNLQTSSLGRIIDAFGSIVFNLEKSSYEAQVGLMCEAFYD
                     KNLDFSYKLFIEKGQANFKNLILGALQDEKTKAITGMFNALANFIIDFSKDYDLKVLL
                     SGGVFQNKTLLEILKAKNFDFFVPLKYPCNDSSIALGQMVHFLNLEK"
     gene            5803..6546
                     /gene="hypB"
                     /locus_tag="RJ266_000254"
     CDS             5803..6546
                     /gene="hypB"
                     /locus_tag="RJ266_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HDV7354038.1"
                     /translation="MCKDCGCSINSSHTHDHHHDHHHENPSLKESKTIEVISKILSKN
                     DEEAKHNRAHFNETNTLCINLMSSPGSGKTTLLESTIKALKNELKIAVIEGDLETNND
                     AIRVKNAGALAYQITTGQSCHLDAFMVHEALHHLAIDDVDLLFIENVGNLVCPASYDL
                     GEHLNVVLLSVTEGSDKPQKYPVMFKKADIVLITKADLAHHFDFDVKEATRLIKELNP
                     RADIITLDAKNDTNMELWYKVLKLKKELF"
     gene            6546..6827
                     /locus_tag="RJ266_000255"
     CDS             6546..6827
                     /locus_tag="RJ266_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HDV7354039.1"
                     /translation="MCLSIPSEILEIDELNNALVQTLGVKRKVNLDLIDEPLKQGDYV
                     LIHVGVAMEKIDKEAALESIKTYQEIVEKMNSGEIKSDEGDLGLNEFHR"
     gene            6811..7902
                     /gene="hypD"
                     /locus_tag="RJ266_000256"
     CDS             6811..7902
                     /gene="hypD"
                     /locus_tag="RJ266_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HDV7354040.1"
                     /translation="MNFIDEFRDKKSILALKKLIEQELKNPINIMEICGGHTHSIMKY
                     ALPSILPKEINFIHGPGCPVCVMPRVRIDTAIKLASMKDTIFCTLGDLLRVPGSEISL
                     LDLRAKGADVRALYSPLEVLKIAKQNLNKNIIFFAIGFETTTPMSALLLQKVIEEKIN
                     NVFFHINHITVPAPVEAIMNDENVKINAFLGPSHVSVITGYGIYEPLAAKFKTPIAVS
                     GFEPVDILESVLNIIKQSNEGTFKVYNQYKRAVSKEGNVKAQNLVKKYFKVCDFEFRG
                     LGLIKEGGLELKEEFSAYDASKKFDCAVQSKNESKACICGQILRGLAKPYDCKVFGKA
                     CTPRSPIGSCMVSGEGACAAYYKYSKVNA"
     gene            7899..8873
                     /gene="hypE"
                     /locus_tag="RJ266_000257"
     CDS             7899..8873
                     /gene="hypE"
                     /locus_tag="RJ266_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein HypE"
                     /protein_id="HDV7354041.1"
                     /translation="MKNISLAHGGGGEEMNELVTKLFKIFDNEILNANNDAAILGNLA
                     LSTDSFVLSPIFLDEEVNIGKLCVCGSINDVLMVGAKPKYLSLGLILEEGFELEKLER
                     ILKSIKEECEKCGVMLVCGDTKVVPKGKADEIYINTTALGEIISKKESKNIKAGLSIL
                     LSGDIGRHGASVLIKRNELEADIKSDCKALDKEVLELLEKDIKVVAMRDATRGGLSAV
                     LNEWAKQSGNDLLIFEEKIIIQDEVLGLCELFGYEAYELANEGTFILCVEKEDELKAL
                     EILKKYNVNASIIGEVLEEKKARVILQNAYGAKRFLESPKGELLPRIC"
     gene            8873..9217
                     /gene="hypA"
                     /locus_tag="RJ266_000258"
     CDS             8873..9217
                     /gene="hypA"
                     /locus_tag="RJ266_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HDV7354042.1"
                     /translation="MHELSIVESLIELCEENALNNKACNVQEIYVKIGRLSGIEVDLF
                     KRCFETFKENSNICKNAKLFIELAPLEILCLKCDQTSILEENVFKCPKCQSIEYKITQ
                     GEDLHLMRLVME"
     gene            complement(9239..10282)
                     /locus_tag="RJ266_000259"
     CDS             complement(9239..10282)
                     /locus_tag="RJ266_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction enzyme HsdR N-terminal
                     domain-containing protein"
                     /protein_id="HDV7354043.1"
                     /translation="MDFENQLNAIVETIAERKTLVNTEEATKMTFIMPFLKTLGYDVF
                     NPSIVVPEYTADIGTKKGEKVDYAIFKDSKPFILIEAKNHTENLDNHNNQLVRYFNTN
                     PSIKFAILTNGIEYRFFTDIEQQNLMDKIPFLVVNLEKLKPRDIKDLKRFICTDLNLD
                     EILSIAMEKKYYRSIQEIFKSEIENPSDEFTSFFAKQMTEKRMTSAVLEEFKNYIKKS
                     FKEIINDLAYEKITSIKNNLQNINDDENDEQIDESKDIVTTEEELQGFYIVKSILASV
                     SANLEDVSYKDTLSYFSILYQGKVTKWICRLYFNTSKKSISFPDGTSYNIEKLEDIYQ
                     YKADIIKAFESRK"
     gene            complement(10375..11340)
                     /locus_tag="RJ266_000260"
     CDS             complement(10375..11340)
                     /locus_tag="RJ266_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HDV7354044.1"
                     /translation="MYRKELQILLSKDSIPNFFFLYGADNFQSELYAEFIKEKYKPDE
                     TLKLFFEEYNFTRASDFLSAGSLFSEKKLLEIKTSKKIPTKDLKVLVELCKNNTDNFF
                     LLELYDESSKQSDIEKIFSPHFVRFFKANGAKEGVELLSIKAKQLGVEITQNALFTLF
                     TSFDENLYLAASELNKFSGLRVDEKTIEQYCYSLNTGSFESFFEKILKKQDFKSELEK
                     ILDNFNEIALINSLYNSFYRLFKIALYAKVNGKIDFKDLLGYTPPPQVGQNLSSQAFS
                     LKIEQYKEIFTLLLKSEYELKTNSKLVKKEFLISNLLQLARILKS"
     gene            complement(11333..13267)
                     /locus_tag="RJ266_000261"
     CDS             complement(11333..13267)
                     /locus_tag="RJ266_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacB/RNase II family 3'-5' exoribonuclease"
                     /protein_id="HDV7354045.1"
                     /translation="MKEFLNSLSYGISSHEANNEFKQIFRELLTNHIIKEHKNKYYLN
                     NGFAFGVLDISSKGTGFLQCFDESFKKDLLIENKNLKGANYKDIVAVKLLPLKKKRPS
                     AKVILVLKKANETSLVITKRYGQAVLGMNIKTGLSTALKASQKSLKALPLGTILKIEN
                     ENNNIIEVLGHIDDESVDEKISLALFNKNNEFSDACIKEALANGDSVDASMYENRMDL
                     RALPFCTIDPIHAKDFDDAIYFDTQKREIYVAIADVSEYVYAYSAIDKEARNRGFSIY
                     FPHIAMPMLPHPLSENICSLKPHLDRLAYCFKITLDHENKVIKEELFEGIINSKHRFN
                     YDEVDEILIQKPDLKELSWLYELFEITKNLRKMRLKNAFEFRTEELRMNLDENLSLKS
                     TVFEKDTPSHNLIEDCMLLANKAAAKLIDIGVFRNHLSADARKIDKLLNELRELGIDV
                     NFKPNLPELIRDIQALADELNLRAEVDKLIIKAQKKAEYSSINAGHFGLGFDKYSHFT
                     SPIRRYSDLILHRLLKAKQKNDEKLFNYLLLNIESTCESLSTLEREADKVAFDFMDRK
                     FARWAAKNIGKKFKALVVQNDGVCIAKLDDEIKGADIILYDTRVNLLESVEVQIMEAD
                     IVMAKIYAKITQKLIKEENV"
     gene            13386..14408
                     /gene="ilvC"
                     /locus_tag="RJ266_000262"
     CDS             13386..14408
                     /gene="ilvC"
                     /locus_tag="RJ266_000262"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HDV7354046.1"
                     /translation="MAITVYYDKDCDLNVIKSKKVAIIGFGSQGHAHAMNLRDNGVNV
                     TIGLREGSVSAVKAKNAGFEVVSVSEASKIADVIMILAPDEIQADIFNVEIKPNLSEG
                     KAIAFAHGFNIHYGQIVVPKGVDVIMIAPKAPGHTVRNEFTLGGGTPCLIAIHQDESK
                     NAKNLALSYASAIGGGRTGIIETTFKAETETDLFGEQAVLCGGLSALIQAGFETLVEA
                     GYEPEMAYFECLHEMKLIVDLIYQGGIADMRYSISNTAEYGDYITGPKIITEETKKAM
                     KGVLKDIQNGVFAKDFILERRAGFARMHAERKNMNDSLIEKTGRNLRAMMPWISAKKL
                     VDKDKN"
     gene            14412..15494
                     /locus_tag="RJ266_000263"
     CDS             14412..15494
                     /locus_tag="RJ266_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HDV7354047.1"
                     /translation="MSKKKLVQIQRYLIIAILFLLCIALALGILVKYQNSQDVSSVKP
                     DYFIDKQEDLISLNKDHYEIGIFQENEFDNNKSVSILEQKIQEIDDLNTSLNEQNLSS
                     VKQNLSLEQNQSLEQNFILKDTNLTQDQNLTFNEDIHLNKISKKPKLAIIIDDMANAS
                     QVRGLKALNLKLNPSFFPPDKNHSETPKLALKFDFYMVHLPLAAINYNKPELDTLNPN
                     DSKERIFKKIKQIKKDFKDLRYINNHTGSLFTSNEEAMRKLYEALKNQNIFFVDSKTI
                     GNSKANKIAKELSMPYIQRDVFLDNEDDVNYVKKQLESAVKLAQKKGFVIAIGHPRKN
                     TFKALEQSKDLLKGVDLVYLSEIYGK"
     gene            15484..16257
                     /locus_tag="RJ266_000264"
     CDS             15484..16257
                     /locus_tag="RJ266_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HDV7354048.1"
                     /translation="MASEILPDEFLELFKDLKKPPKKLHYKGNLSLLKQDKIAIIGSR
                     RMSIYTKNCVFSLASMLKNAHLCVVSGGALGVDITASMAAMPNTIGIFANGLDQIYPR
                     TNEKIIKQIYENALALSEYEDDYLPKNYDFLLRNRLVIALSKAVVVAQADIKSGSMQS
                     AKLALELHKPLYVLPQRLGESTGTNLLLNENKAKLICDFKEFVSEFASIDMNQDEFLE
                     FCKKGVSVDEALKIYGQKVYEYELEGKISIEGLFIRVLV"
     gene            16254..16637
                     /gene="ruvX"
                     /locus_tag="RJ266_000265"
     CDS             16254..16637
                     /gene="ruvX"
                     /locus_tag="RJ266_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HDV7354049.1"
                     /translation="MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKN
                     LLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLEFDKEICFVDESGTSKEALEYGV
                     ANTRKKDGKLDSLAAFIMIKDYFAL"
     gene            16666..17506
                     /locus_tag="RJ266_000266"
                     /pseudo
     CDS             16666..17506
                     /locus_tag="RJ266_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344065.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
     gene            complement(17682..18179)
                     /gene="msrA"
                     /locus_tag="RJ266_000267"
     CDS             complement(17682..18179)
                     /gene="msrA"
                     /locus_tag="RJ266_000267"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDV7354050.1"
                     /translation="MKNIVLGGGCFWCVEAVFERLKGVIDTEVGYSGGNPNPSYESVC
                     NGDGNIEVVKINYDEKQISLLEILTLFFKIHDPTSIDKQGGDIGIQYRSIIFYENEED
                     KILAQNFIEEQQKIFSKKIVTKISRLQTYYKAENYHQHYFINNPNQGYCQAIIAPKLQ
                     KIQSD"
     gene            complement(18220..18738)
                     /gene="ppa"
                     /locus_tag="RJ266_000268"
     CDS             complement(18220..18738)
                     /gene="ppa"
                     /locus_tag="RJ266_000268"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HDV7354051.1"
                     /translation="MNLNKIKIGDIPNKINAVIEIPYGSNIKYEIDKDSGAIMVDRVM
                     ASAMFYPANYGFIANTLADDGDPVDILVLNEYPIQAGAVIPCRLIGVLIMEDESGMDE
                     KLLAVPNSKIDARYDNIKTYTDLPQATLNKIKNFFETYKILEPNKWVKVQDFKDEKAA
                     IEILEKAIKNYK"
     gene            complement(18748..19326)
                     /locus_tag="RJ266_000269"
     CDS             complement(18748..19326)
                     /locus_tag="RJ266_000269"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HDV7354052.1"
                     /translation="MKELFLIIGAPGSGKTTDASLIAQADATNITHYSTGDLLRAEVA
                     SGSELGKTIDSFISKGNLVPLDVVINTIVCALKAAPTKTIIIDGYPRSVEQMMEFDKV
                     LSEQNEICLKGVIEVRVSEEVAKERVLGRNRGADDNEEVFYNRMKVYTEPLNEILDFY
                     QKKKLHFIIDGERAIEPIVADMKELIKKIQSI"
     gene            complement(19323..21074)
                     /gene="aspS"
                     /locus_tag="RJ266_000270"
     CDS             complement(19323..21074)
                     /gene="aspS"
                     /locus_tag="RJ266_000270"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HDV7354053.1"
                     /translation="MRSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGI
                     IQLVCDPNDSKEAHEIASNARNEFVLITEGTIRPRGEGLVNPKLKTGEIEVVVSKLTI
                     ENESAVPPFAIADESVNEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFL
                     EVETPILTKATPEGARDYLVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCF
                     RDEDLRADRQPEFTQIDVEMSFCEQKDVIKVAETFLKDIFKACGKEIQTPFRQMQYKD
                     AMENYGSDKPDLRFDLKFIDVIDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFS
                     KRQMQRFEEFVRKFGAQGLAFIQVKKDGLKGPLCKFFSEEDLNELSKRCELEVGDVVF
                     FGAGAKKTVLDYMGRFRIFLANELKLIDPNALEFLWVVDFPMFEQNDDGSYSAMHHPF
                     TMPKNIDETDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEK
                     FGFLLDALSFGAPPHGGIAIGLDRLIMLVTGANNIREVIAFPKTQRAQCLMTDAPSPA
                     SNEAMRELGIKLRENIK"
     gene            21165..22025
                     /locus_tag="RJ266_000271"
     CDS             21165..22025
                     /locus_tag="RJ266_000271"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HDV7354054.1"
                     /translation="MQNKIDYKNIKKIGLVTRPNVSLDKEILKLQSILSIYKVELVLL
                     KESSEILDLPKYGLDDLFKISDFVISLGGDGTLISLCRKACEYDKAVLGIHAGHLGFL
                     TDFKVDEAENFFQAFFQGEFRIEKPYLLSVFLEDKQGKILEKLAFNDVVISKNNQASM
                     AHIEVFRKEKKFNEYFGDGLIVATPAGSTAYNLSANGPIVYTLAQAFILTPVCSHSLT
                     QRPIVLPKGFEIEIMAKDCILCIDGQENYKMNDFKSIKVGLSDKNVALIHPKNRDYFQ
                     ILKEKLHWGN"
     gene            22025..23548
                     /locus_tag="RJ266_000272"
     CDS             22025..23548
                     /locus_tag="RJ266_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDV7354055.1"
                     /translation="MINRIFMKENLGFKKAELEISKGLTVFTGLSGAGKSVLFKGILS
                     AFSLSESEAKIVEIELDDKLDLESFGIESEEENVFKLLKEKNTKYFINNQSIAKKSLQ
                     NLSKTFIKYLSAKENNEFGNEKFLNLLDALEMQENTNFVSFLEDFKKDFNAYSQISNE
                     LNAILEEEKKVEELKELARAQIEKISSINPKIGEYEELLILKKKLSKKDKLEEAWSKA
                     ERIFELEKVVIEALNLSEVDASFFSECLNELRVICENQKMEDLDFDVETLLDRIENLS
                     YLIKRYESIENALEVLKQKKHELEHYENLSFEKKELEKKFQELKQKLEEKAQILTQAR
                     KKNLKKLEKCLNNYLKDLYMKDASLTLKENEKISILGKDEIMLDINLAHLKNLSSGEL
                     NRLRLAFIATECNILNAGKGILFLDEIDANLSGKEAMSIAKVLEELSKFYQIFAISHL
                     PQLSSKAHNHFLVEKNGEESKVKKLDQEERIKELARMVSGELVSDEAIEFAKTLFKN"
     gene            23654..24898
                     /gene="cbrR"
                     /locus_tag="RJ266_000273"
     CDS             23654..24898
                     /gene="cbrR"
                     /locus_tag="RJ266_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile resistance response regulator CbrR"
                     /protein_id="HDV7354056.1"
                     /translation="MNKKILIIDDNKMLGKLLAKKIQMTLDYEVDIAFGFAEAKELMN
                     NDYFLAFVDLCLPDAPNGEVVDYVIEKKIPAIVLTASGDKATKEKFMDKDILDYIFKE
                     SETCIDEIISSIVKLNQYAKTKVIVAMSKLPERNEIKKILTQRQFNVLAAAHGEEAMS
                     YLNDNNDVKLIIADVNMPVISGFELLTQVRERFSDDELGVILLGDHNDSFEANSFKNG
                     VNEYLFKPLSKESFNCRLDRCLSYMDDKKFLSTYNVLDPVSGVKNYNALIDGIDDYFN
                     EIATKDEEFAFAFLDIDNLQMINDEYGREVGDEVIKICANEIVNETKGRDLVGRYSAE
                     KICILLKNISQERAIKIFSRIRVNIKKAGVLVNLDEVFFTASIGVVFGKSGDKIDSLA
                     DKASKILSQAKDNGKDRVEVCS"
     gene            24889..25704
                     /locus_tag="RJ266_000274"
     CDS             24889..25704
                     /locus_tag="RJ266_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HDV7354057.1"
                     /translation="MFLNLDFQDGLRIVDTHCHLDSEAFKDDLDETLNRAFKNGIDKI
                     IIPGADIKDLPYAATIAHKYKNIFFAAGVHPYEIDNYDEKILRQYLCDEKCVAVGECG
                     LDYFRFKSDLAEEIQKEKENQKKIFIAQLELAIEFKKPVIIHSREANHDTYEILHGYS
                     KDLVGGVLHCFNASEHLLTLFEDGFYFGIGGVLTFKNAKKLVEILPKIPKDRLLLETD
                     APYLTPEPYRGKRNEPLLTQFVANKMCEVLNLSRKELLEICFNNSEKLFFKGY"
     gene            25704..26822
                     /locus_tag="RJ266_000275"
     CDS             25704..26822
                     /locus_tag="RJ266_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HDV7354058.1"
                     /translation="MKKILLCFLICFNFLFAQINTPEFYERQMNVLRNLDINPSFISD
                     LIFVQTQQDIKSKHAQTLIDSMQNFSKVTPMIRKILAQQEVPDEILYLAMVESGLKTH
                     SVSNAKAVGVWQFMQPTARNLGLRIDAYVDERRDPVKSTYAATNYLKELKEEFGKWYL
                     ALLAYNCGNGKLRQAIKQAGSDDLSVLLNPDKKYLSLETRNFIRKILTLAFLANDRDF
                     LLDKDASLMNYALSNEFAKVDVPSSASLKEIAKNLNMDLATFKKYNPQFKHNFTPPGK
                     GYYMYIPLNKVAFFDKNFKAEKLAKVDTTIPMTRTYTVKSGDSLYKIAKNYNISVDEI
                     REFNKIAKNHLSINQKLIIPIKENKNANKNNYTKVVSR"
     gene            26782..27609
                     /locus_tag="RJ266_000276"
     CDS             26782..27609
                     /locus_tag="RJ266_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HDV7354059.1"
                     /translation="MQIKTITLKLSAVSLGALFFSGCLGTSFFSSLDNAQVYYPSNDF
                     KSSPSSSGTKGTMKPYTINGKTYYPTVVAVGETADGIASWYGPGFHGKKTSNGETYNQ
                     NALTAAHKTLPMNTILKVTNLNNNRQVTVRVNDRGPFVNNRIIDLSKGAASQIDMIAS
                     GTAPVRLEVIGFGSSNSGNNIVHSNVNYGNSGEIANNGQIYEGGNFMVQIGAFKNPAG
                     AQTIAARYKTYRTYSSTIRTSSVDGLNRVFLTGFRSEDEARDFAASGAFAGAFVVRE"
     gene            27615..28103
                     /locus_tag="RJ266_000277"
     CDS             27615..28103
                     /locus_tag="RJ266_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HDV7354060.1"
                     /translation="MTELIFLDVDGCLTDGKIIYTSNGEFIKEFDVKDGAAIEAWLKL
                     GKKIAIITGRNCPCVEKRAKDLKIEILYQGIKDKLACAKEILQKLNLDFSQCAAIGDY
                     FNDKALLESVGLSFKPKDGHKNLNVDIVLSKKGGKAAVAQMIEILVEKNHLKEEWNKL
                     WL"
     gene            28094..28609
                     /locus_tag="RJ266_000278"
     CDS             28094..28609
                     /locus_tag="RJ266_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354061.1"
                     /translation="MAIKIFGILIALFTITFTILSLQDPYSLNLQTNALNFKNIEAKN
                     LKAYESNASTIKAYYKANSWVRYADRDEFNDFITLNLDFNLSANRLEFFNKDMSKVLF
                     EGNVTYIGSNNVKIISQEVEYQPKDKILHTNTNFKALINGSIINGNTLNYDIKNKILN
                     IQGVSAWLQDK"
     gene            28591..29052
                     /locus_tag="RJ266_000279"
     CDS             28591..29052
                     /locus_tag="RJ266_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptA/OstA family protein"
                     /protein_id="HDV7354062.1"
                     /translation="MVARQIILLLACVSVTWATQIEVKALNFYSDENKGESILSGNVE
                     VIRGDDILNSEKLIIYTDKNRKPIRYEAMQNARFKIVLKGKTYKGSGDKFIYNVIKDT
                     YEINGHAYINELGSNQKLFGDKIIVDRKANIYRVESKDQKPARFVFDLKDK"
     gene            29049..29645
                     /locus_tag="RJ266_000280"
     CDS             29049..29645
                     /locus_tag="RJ266_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HDV7354063.1"
                     /translation="MIISAKFITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCK
                     QKNLAKSSATPGKTQLINFFEVTCKRNEEKFNINFIDLPGFGYAKVSKNLKEIWNQNL
                     DEFLKLRTSIKLFIHLIDSRHIHLEIDVNLNDYLKRFLRPDQKILKVFTKCDKLNQSE
                     KAKLKNEFKDSILVSNLNKFGLDSLEDIIINQTLGLGK"
     gene            29642..30136
                     /locus_tag="RJ266_000281"
     CDS             29642..30136
                     /locus_tag="RJ266_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354064.1"
                     /translation="MRRNLSAYKAKFNGAYVFLGFFFLIYQILGSTFVYAPLLYGIFF
                     CYMFCLLEERERTFSRLDFRWYFSLFFLFFTDITYNFFIFSSWLAFFIFYYLCADWIK
                     TNLKIGKFIPVVFVLCAYGIILFLDMILFYIGDEKNKILGWAYIVSVFIECCLAYVFF
                     KGKI"
     gene            30137..31942
                     /gene="mrdA"
                     /locus_tag="RJ266_000282"
     CDS             30137..31942
                     /gene="mrdA"
                     /locus_tag="RJ266_000282"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDV7354065.1"
                     /translation="MRMRLVVGFILLFFIFLLSRVYYLSIKSNVYYEELAKQNAIKTE
                     FLPPVRGQITDRNGTLLAINDLGFSISIKPYLSIKKSNKGILDKELSELTNLFPDLNA
                     SKLAEIYKRNDSYYNQDFIKVVDFIPYDEIIPHYSELNLNKTIKIDPVVKRKYPFGKL
                     ASHIIGYVGKANLQDVQENEIAKLSNYTGKSGIERYYNDILQGEKGTRVYKVNALNQE
                     VEQLSYTPAMSNDIELTIDIELQSYLTSLFEGNAGAAIIMNVNDGSILAAGSFPEYDL
                     NPFVTGISFKDWDELSNSLDHPFTNKLINGYYPPGSVVKMGVGLSFLNSKNISPSTQY
                     VCNGSIELGGRFFRCWNRSGHGPVDLKHAIKYSCDVYFYNGSLQVGIDQISETLSRIG
                     FGAKTGVDLPSEFVGTLPSKEWKMQRYRQSWFQGDTLNTAIGQGNFLATPMQIARYTA
                     QIAKGGEVIPHFLKSIENNNTTIENQMDENKKEIFTLFEKSQLPYIRDAMYAVANEQG
                     GTSYRYLHNLDVKVAAKTGTAQVVGFSQTDKNRVDEKQFEYYTRSHAWLTSYAPYSKP
                     KYVVTVLLEHGGRNITSGATVAKIYQKMIELGYFK"
     gene            complement(32063..33853)
                     /locus_tag="RJ266_000283"
     CDS             complement(32063..33853)
                     /locus_tag="RJ266_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HDV7354066.1"
                     /translation="MSIYKQRVLELRRLMKENNIDAYLILSADPHLSEYLPEYYKNRV
                     FISGFKGSVGTVLITQEEGFLWVDGRYWLQAQKELEGSGILLQKQDAKNTFTKWLEKN
                     LSEDQILGIDFALLPLSLQKDLKINCKANLKHIDLISPLWKDRPTLPQEKIYEHELEY
                     YSYSRKEKLALVRQKMKNLNVTSHLISSLDDIAWLTNLRGNDVNYNPVFLSHLLILED
                     KALLFVDQKKVNSELEKKLNLDGFWLKNYDEIIMELEKLANTNLLIEPSKMTALLINS
                     LDKSVKIIQEINPSTHLKAAKNTKEIAHIQDAMIEDGVALCKFFAWLEEAIENKELIS
                     ELDIDVKASEFRAQSKYYISDSFATIAGFNENAAYPHYKATKESFAYLKKDGLLLIDS
                     GGQYKNGTTDITRVVPIGKANAEQIHDYTLVLKAHIAISSAIFPKDIAMPLLDAITRA
                     PLWKEQIDYIHGTGHGVGYFLNVHEGPQVLSYLSPVLEKTKAKEGMLTSIEPGIYKVG
                     KWGIRLENLVIHTKVENPKNKDFGEFLYFKPVTLCPFEISCIDTKMLDEKEKEWLNNY
                     HKEVFEKLSPKLGDYPKALVWLEKRTKAIF"
     gene            complement(33850..35421)
                     /locus_tag="RJ266_000284"
     CDS             complement(33850..35421)
                     /locus_tag="RJ266_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HDV7354067.1"
                     /translation="MSKNVKNLDTSFFGHPKPLLSLSLTELWERFSFYGIRPLLYLFM
                     MASFEKSGMNLKPEEASAIMGIFASCLYLAALPGGWLADNYLGQKRAILLGALTIAFG
                     HLCIAFSYFNNKMIFVGMVFLVIGTGLFKTCASVMVGMLYKKNDARRDSGFTLFYMCF
                     NFGAFVAPLICGFLQKEYGWHFGFGAGGIGMLLAVIIFYLKTMPDLKEFDEKVGIDST
                     WDRPSKKSKNAFYIIIVSGIVLLGAIFLILGGFIKLDAQVINKNIILTILACAGIYFL
                     YLFAFTSLKIEEKRNLIIFIVLFLAAALFWSVYEQQYTSFNFFAEKLTDKTILNYEIP
                     TIWFQSLGGLFVILFAPFSAFIWTICAKNNKEISSIIKFALGLLGAALAFLIMALASN
                     HAISLNGDANTLRENLENSSQIILVSPWWLVSSFLLMVLGELCLSPVGLSIMTKIAPN
                     LIKSQVMGLWFVASALGNALAGFIGGKASEENIAYLPNLFYQCMWILLGAVIILLILK
                     KPINKILKINIKEKI"
     gene            complement(35592..37118)
                     /locus_tag="RJ266_000285"
                     /pseudo
     CDS             complement(35592..37118)
                     /locus_tag="RJ266_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516966.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
BASE COUNT        12939 a         4904 c         6317 g        13013 t
ORIGIN      
        1 taagtagaat tgttttttaa aagaaatatt taaaaaaaga gataagataa tatcatggca
       61 aaaaaacaac tctccttaac aagacttagt tttcctatat tttgggattt gctttctaag
      121 tatttaactg tgattatcaa taccgctatg gtgtcgcatt attctaattt tcttgtcggt
      181 gctatggggg ctggaaatca aattttagat ctttttatca ctattttttc atttttaagt
      241 gtgggttgta gcgtggtgat cgcacaagca attggtgcaa aagatcatgt tttagcaaga
      301 aaagtgattc atcaaagttt gttcttaaat gcacttttag gctttgtatg cggtgtgctt
      361 attttatggc atggggagta tttgctttat cttttaaaaa ttccacaaga attgctcaaa
      421 gatagcgaaa tttacttaca tatgcttgca atttgtttgt tttttgatgc cataggtatt
      481 gttttagctg ctattgtaag ggtttataat atggcttatt gggtcatgtt tataggtttt
      541 ttgatggata tagtggtgat ttgtggaaat tattatgttt tgcattatac aaagtcagaa
      601 ctttttggaa tagggcttag taatattttt gctcgcattg ttgctatagt tgctttgttt
      661 gcgatacttt tttataaact taaaattcat cttaaaatca aagaaatgat aaaacttgaa
      721 aaagaagttt taaaaaaggt tttaaatata ggaggatttt cagcagggga aaatcttttg
      781 tggatagtcc aatatactat agcttttgct tttgtagcaa gcttaggtga ggcgagtttg
      841 agtgtgcaaa cgatttattt tcaaatttca atgcttatca tgcttatagg acaagctacg
      901 agcatagcta atgaaattat agtaggtaaa ttaatcggtg ctaggtatga aaatatcgct
      961 tacaaacatg cttggcgtgc tttatatttt agtgtaatag cgagtgcttt agtggcgttt
     1021 ttaaactatc tttgtcaaga ttttactatg caaattttag ggcttaaaga agagctaaaa
     1081 aatttaatga tacctttatt tgctctttca atctttcttg aaatttcacg aacttttaat
     1141 atagttatgg ttaattcctt gcgcgcaagt ggcgatgcta agtttccatt ttttagcgga
     1201 cttgttttta tgatgggggt atctttgcct gtgggttatg tgctttgttt tcattttaat
     1261 cttggaattt taggggtttg gataggattt tgtgcagatg aatttttgcg tggaatggta
     1321 aattcataca gatggaaaag taaaaaatgg caaggcaaag ctctagttta aaatcattta
     1381 tttataaaga tgagtgctat ttttattcta aaaaatgcat aaaaacttta agattaaggc
     1441 taaatgaaaa gggtgaattt gttcttagta ttccttattt ttgcaccttt aaaagtgttt
     1501 atgagttttt agataaatca agttcttgga tgaatgaggc aaaaaaaaga tttgaaaaaa
     1561 aagccttaaa agatgatgag ttaatctttt tagctaaaaa atatcaaatt atttttgatg
     1621 aaaatgccaa aaaaatttat tttgataaag ataaaataat ttgtcaaaat aaagcaaaat
     1681 tggatttatt tttaagacaa aatgctaaaa agatttttac tttttatctt aaaaaatgga
     1741 gtaaaaaaac aggcttattt tacacgcatt taagcattaa aaatatgaaa acgcgttggg
     1801 gttcttgcaa tcacaataaa gcttatatta atttaaattt aaaactcatt caaaaaagtt
     1861 taagagctat tgaatatgtg attttgcatg aaattagcca tttaaaattt cccaatcata
     1921 gcaaagaatt ttatactttt atagagcatt ttatgagtga ttttaggcaa agagagaaag
     1981 aatttttaag ttaaaaatgt tatatttata gtttattttt caaaaaaggc ataatatgac
     2041 tttggatttt gattttattt ataatgcaga taatgatatt tttgaatatt tattgcgttt
     2101 ttatgcgaaa aattacaatt atatccttag taaagaagaa aatacttatc atttttctat
     2161 cgatgcagat gaagaaaatt taaagacttt ttgcgattct ttgaatttca tgagtcatag
     2221 cgtttttttg aaaaaatttg atgtaaaagc ggggcatggt tttaaccctt gtatgccaga
     2281 ggataaagaa ttttcaagat tttcttatat tactcattta aattctaatg cgtatcaaga
     2341 aaaaaaactt ttaaacaaaa acgaatgggg cgtgttttgt gagtgtgaat tttcaagcaa
     2401 tttatcagaa tttgaaaaaa tcaatgaaga aaatttcaat acttttttaa atcttgcctt
     2461 tgatttgtta agtcaagaaa aaaagattta tttgaaagat aaaaatggca tttatgaatt
     2521 ttctttgttt aagaacgaat ttataggaga ttttttactt ccttgtgata ttaaggctat
     2581 aaattcagtt tttgtttgtt caaatgaaaa tttaaaactt cttgcaagtt tagaaaaacc
     2641 tttgatgaag ctaaggctta atgctatgtt tagaaaaaat cacaatcttg attttagtga
     2701 ttttaaaatc agacttgcta gagatttgtt ttgttttgct ttaggtttga aactttttga
     2761 aaatgagtat aaatttttaa gcgtaaaaaa gatagaagag tatcaaaaag atttttatat
     2821 cagtgcttta gatgagcaag tggtggtttt agagggtttt gaatttatca atgctaaggc
     2881 aagagagctt attttttcta aagaagataa aaatatggca agaatttctt atcttgtaag
     2941 ccgttataaa gaaaaagctt ttattttaga gctaagtaag gattatgaag atattttgct
     3001 tatcaataaa gagcttaatt tacttaaact ttgcttacca aaacacagca aagaacttta
     3061 tgaagagatt aaaaaagatg aaattggtgc aaggctttta gaaaatttta acaaggaatt
     3121 tcctctttta gatgaaaatt ttgagcttca aaacaatttt tattccttgc ttggcttgct
     3181 gggtagagtg ctaaatttgg gtagaaattt acaagagagt gctagtgagc ttttaaaaat
     3241 cgctgatgag tcaaaaatgc ctcgtggagt aaagattgat tatcgtttga aagaagataa
     3301 aagttttgat tatacaagaa ctttaagatc tgctatgagt tttatgttag caggtgtaga
     3361 tagtgctaat atcgcttatg gagcggttga gagtttggct tatttcttgc gtgatactta
     3421 tgatgaatta agagagaaaa agcaaagtga cttagcgctt ataagtggct ctttgtttga
     3481 acataaatct ttacttaaaa atactttaaa acatcttaaa aattgtcagt taagcgatgt
     3541 gccacttagg atataagatc aaaatttcag gtctagttca aggggtgggt tttcgcccct
     3601 tagtttatga actagctttg aaatcaaagc tttttggaga ggtaagaaat gatggttttg
     3661 gggtagaaat tattcttgct tgcactcaaa aagaatgtca aaatttcata gaaaatttaa
     3721 aaaatcatct cccgccttta gcaagaatag atcagcttat aatcacgcaa atttctattt
     3781 caaactatga aaattttagc atcactcctt ctttagagaa tacaaaaagc acacctatgt
     3841 taagtgattt tgcactttgt aaggagtgta aaaaagaatt ttttgatgaa aaaaatccac
     3901 gctttttgta tccctttatc acttgcacac attgtgggcc acgctttagt attataaaaa
     3961 gtcttcctta tgatagaacc catacttcca tgcaagaatt attgatgtgt gagttttgta
     4021 aaagcgaata cgaagatcct aaaaataggc gttttcatgc ccagcccatc agttgtccta
     4081 agtgtaaaat caatgttttt cttaaaaatc caaagggtga aattttagcc aaagatcaag
     4141 aagcttttat acaaagtgcg aagtttttaa aggaaggtaa aattttagcc attaaaggca
     4201 tgggcggttt tcatctcatg tgtgatgcgt ttaatgaaga agctttaaaa actctaagac
     4261 ttagaaaaaa tcgccccaaa aaaccctttg ctttgatgtg taaagattta caaagtgcta
     4321 aagaacttgc ctttatagat gaaaaagaag aagctttact tggtggggtt ttggctccta
     4381 ttgtgatttt aaaggcaaaa aaagcctttt ctttaatcgc tcctgatgta gataaaatcg
     4441 gcattatgct agcttatacg cctttacatc ttttgctttt tgagtatttt aaaggaagcc
     4501 ttgtagcaac aagtgcgaat ttaagcggag aaagtatcat taaagatgag tttaatttgc
     4561 gtcaaaaact tgataaagtt tttgattttt atttggatta tgatagggaa attatcaatg
     4621 caagtgatga tagcatcgct caagtggtaa atggcaaaac tatgtttttg cgtacttcaa
     4681 ggggtttaaa tcccttttat ttggaaagaa attttaataa aaaaggcact tttttagctt
     4741 tgggtgcgga acttaaaaat gaatttgtga ttttttatga aaataaactt ttaatttctc
     4801 cttatatagg ggatttgaaa agtcttgatg tgcatgagag attttttaaa cttttagaat
     4861 tttttaaaca aaattatgat ttgaaatttg atgcgatttt gtgcgataaa cacccgcatt
     4921 ttagctatgc aaaagaattt gaagaaagga ttaaaatttc tcatcattat gcgcattttt
     4981 gtgcggctta ttttgaatac gaagaaaatt ttgcaaaaga tgaaaaggct ttagctttta
     5041 tttgtgatgg aacaggttat ggcgaagatg gcaaaatttg gggtggagaa gtttttgtag
     5101 gaaatttaaa agaatatgaa agaattgcac attttgaaaa tttcactctt ataaatagtg
     5161 atattaaaaa tatacaaaat ttggctctaa gtcttatttt tcattatgat ttagaagata
     5221 aggctaagga gtttttagca aaaattccaa aaatcaaact tgaaaatctt aaaaaaattt
     5281 attctcaatc taacttacaa acaagctctt taggacgcat tatcgatgct tttggaagta
     5341 ttgtttttaa cttagaaaaa agttcttatg aagcccaagt tggcttaatg tgtgaagctt
     5401 tttatgataa aaatcttgat ttttcttata agctttttat agaaaaaggg caggctaatt
     5461 ttaaaaattt aatcctaggg gctttgcaag atgaaaaaac taaggcaatt acaggtatgt
     5521 ttaatgcctt agcaaatttt atcatagatt ttagcaaaga ttatgattta aaagtgcttt
     5581 taagtggagg agtttttcaa aacaaaacct tgcttgaaat tttaaaagct aaaaattttg
     5641 atttttttgt acctttaaaa tatccttgca atgatagctc catagcctta ggacaaatgg
     5701 tacatttttt aaatttagaa aaataaagca aatattctaa aaactcataa ttttttaatg
     5761 cttttaaggt taaaatgaaa caaaaaatat aaaggaaaga aaatgtgtaa agattgcggc
     5821 tgttctataa attcaagcca tacgcatgat catcatcatg atcaccacca tgaaaatcca
     5881 agcttaaaag aaagtaaaac catagaagtg atttctaaaa ttttaagcaa aaatgatgaa
     5941 gaagctaagc acaatagggc acattttaat gaaaccaaca cgctttgtat caatttaatg
     6001 agttctccag gtagtggaaa aactacgctt ttagaaagca cgatcaaggc tttgaaaaat
     6061 gagcttaaaa tcgctgtgat tgaaggggat ttggaaacca ataatgacgc tataagagta
     6121 aaaaatgctg gagctttagc atatcaaatc actacagggc aaagctgtca tttggacgct
     6181 tttatggtgc atgaggcttt gcatcattta gccattgatg atgtggattt gctttttata
     6241 gaaaatgttg gaaatttggt ttgtcctgca agttatgatt taggagagca tttaaatgtg
     6301 gttttgcttt cggtaactga aggaagtgat aaaccgcaaa aataccctgt gatgtttaaa
     6361 aaggctgata tagttttaat cacaaaggca gatttagctc atcattttga ttttgatgtt
     6421 aaagaggcga ctaggttgat taaagaatta aatcctagag cagatattat cacccttgat
     6481 gcaaaaaatg acaccaatat ggagctttgg tataaggtgc ttaaacttaa aaaggagctt
     6541 ttttaatgtg tttgtctata ccttctgaaa ttttagaaat cgatgagtta aacaatgctt
     6601 tagtgcaaac tttaggcgtg aaaagaaaag tgaatttaga tttgattgat gagcctttaa
     6661 aacaaggcga ttatgtatta atccatgtag gcgttgccat ggaaaaaatc gacaaagaag
     6721 ctgcactaga aagcattaaa acctatcaag aaatagtaga aaaaatgaat agtggagaga
     6781 taaaaagtga tgagggggat ttaggtttaa atgaatttca tcgatgaatt tagagataaa
     6841 aaaagcattt tagctttaaa aaaactcata gaacaagaac ttaaaaatcc tatcaacatc
     6901 atggaaattt gcggtgggca tacgcatagt atcatgaaat atgctttgcc ttctattttg
     6961 ccaaaggaaa ttaacttcat ccatgggcca ggatgtcctg tttgtgttat gccaagagtt
     7021 cgcattgata cagctatcaa gttagcctct atgaaagata cgattttttg tactttagga
     7081 gatcttttaa gggtgcctgg aagtgaaatt tctttactgg atttaagagc taaaggggct
     7141 gatgttagag cgctttattc tccgcttgag gttttaaaaa tcgctaagca aaatttaaac
     7201 aaaaatatca tcttttttgc tataggtttt gaaaccacta cgcctatgag tgctttactt
     7261 cttcaaaagg ttatagaaga gaaaataaat aatgtctttt tccatatcaa tcatatcaca
     7321 gttccagcac ctgtagaagc gatcatgaat gatgaaaatg taaaaatcaa tgctttttta
     7381 ggtccttctc atgtgagtgt gattacaggt tatggtattt atgagccttt agcagcaaag
     7441 tttaaaaccc ctatagcggt gagtggtttt gaaccagttg atattttaga aagtgtgtta
     7501 aatatcataa aacaaagcaa tgaaggcact tttaaagtgt ataatcaata caaaagagcc
     7561 gtaagtaaag aaggcaatgt taaagcacaa aatttagtaa aaaaatactt taaggtgtgt
     7621 gattttgaat ttcgtggctt aggacttatt aaagaggggg gcttggagct aaaagaagaa
     7681 tttagcgctt atgatgcgag taaaaaattc gattgcgcgg tgcaaagcaa aaatgaaagc
     7741 aaagcctgta tttgtgggca aattttaaga ggtttagcca agccttatga ttgtaaagtt
     7801 tttggcaagg cttgtacgcc aagaagccct ataggaagtt gtatggtttc tggcgaaggt
     7861 gcttgtgcgg cgtattataa atactcaaag gtgaatgcat gaaaaatatt tccttagccc
     7921 acggaggggg tggagaagag atgaatgagc ttgtaactaa gctttttaag atctttgata
     7981 atgaaatttt aaacgcaaat aatgatgcag cgattttggg aaatttggct ttaagcacgg
     8041 attcttttgt tttaagtccg atttttttag atgaagaggt caatataggc aaactttgtg
     8101 tttgtggttc tattaacgat gttttgatgg tgggtgctaa gccaaaatat ctaagtttag
     8161 ggcttatctt agaagaaggt tttgagttag aaaaattaga acgcatttta aaaagcatta
     8221 aagaagaatg tgaaaaatgc ggagttatgt tagtttgtgg cgatactaaa gtcgttccta
     8281 agggtaaggc agatgaaatt tatatcaaca ctacagcctt aggtgaaatt atttctaaaa
     8341 aagaaagtaa aaatatcaaa gcagggctta gcatacttct ttcaggcgat ataggaaggc
     8401 atggagctag tgttttaatc aaaagaaatg agttagaagc tgatattaaa agtgattgta
     8461 aggctttgga taaagaggtt ttagagcttt tagaaaaaga tataaaggtt gtagctatga
     8521 gagatgctac tcgtggggga cttagtgcgg ttttaaatga gtgggcaaag caaagtggaa
     8581 atgatctttt gatctttgaa gaaaaaatca tcattcaaga tgaggtttta ggactttgtg
     8641 agctttttgg ttatgaagct tatgaacttg caaatgaagg cacttttata ctttgtgtgg
     8701 aaaaagaaga tgagttaaaa gccttagaaa ttctaaaaaa atacaatgta aatgcgagta
     8761 ttataggaga agttttagaa gagaaaaaag cacgcgtgat cttacaaaac gcttatgggg
     8821 caaaacgctt tttagaaagc cctaaaggcg aacttttacc aagaatttgc taatgcacga
     8881 attaagtata gtagaatctt taatcgaact ttgtgaagaa aatgccttaa acaataaggc
     8941 ttgcaatgta caagaaattt atgtaaaaat tgggcgttta agcggtatag aagtggatct
     9001 ttttaagcgt tgttttgaaa cttttaaaga aaactcaaat atttgtaaaa atgctaaact
     9061 ttttatagaa cttgccccac ttgaaatttt atgtttaaaa tgcgatcaaa caagtatttt
     9121 agaagaaaat gtttttaagt gtcctaaatg tcaaagtata gaatataaaa tcacacaagg
     9181 tgaggactta catcttatgc gacttgtgat ggagtgaaag taaaatcaat aaatgatttt
     9241 actttctgct ttcaaatgct ttgataatat ctgctttata ttgataaata tcttctaatt
     9301 tttctatatt ataacttgtt ccatccggaa aactaataga ttttttgctt gtattaaaat
     9361 ataatctaca tatccactta gtaactttgc cttgatataa aatactaaaa tagcttaaag
     9421 tatctttgta acttacatct tcaagattgg cgctgacact agcaagaatt gattttacta
     9481 tatagaaacc ttgtaattct tcttctgttg tgacaatatc tttactttca tcaatttgct
     9541 catcattttc atcatcgttt atgttttgaa gattgttttt aatacttgtg attttttcat
     9601 aagctaaatc attaataatt tctttaaaag attttttaat gtaatttttg aattcttcta
     9661 aaacagcact agtcattctt ttttctgtca tttgtttagc aaaaaaactt gtaaattcat
     9721 cgcttggatt ttctatttca cttttaaaaa tttcttgtat acttcggtaa tattttttct
     9781 ccatagcaat gcttagaatt tcatctaagt ttaagtcagt gcaaataaaa cgttttagat
     9841 ctttaatatc tctaggttta agtttttcaa gattaacaac taaaaatggt attttatcca
     9901 taagattttg ttgttcaata tctgtaaaaa atctatattc aataccattg gtaagaatgg
     9961 caaatttaat actaggatta gtgttaaaat atcttacaag ctgattgtta tgattatcta
    10021 aattttcagt atgattttta gcttcaatta aaataaaagg ttttgaatct ttgaaaatag
    10081 cataatccac tttttcgcct tttttagttc ctatatctgc tgtatattct ggcacaacaa
    10141 tactagggtt aaaaacatca taacccaatg tttttaaaaa gggcattata aaagtcattt
    10201 ttgtagcttc ttcagtattg acaagtgttt tgcgttcagc tattgtttca acgatagcat
    10261 ttaattgatt ttcaaaatcc attttcattc cttttgtttt tattaaaagt attatagcaa
    10321 cattttttag ttttataata aaaaaagtga ttttaatttt tataatttta ctatttagct
    10381 tttcaaaatc cttgcaagtt gaagcaaatt tgaaatcaaa aattcttttt ttacgagctt
    10441 agaattggtt ttaagctcgt attcgctttt aagcaaaaga gtgaaaattt ctttatattg
    10501 ttcgattttt aaactaaagg cttgagagct taaattttgt cccacttgag gaggtggagt
    10561 atagcctaaa agatctttaa aatcaatttt accattgact ttagcataaa gtgcgatttt
    10621 aaacaaacga taaaaagaat tatacaaaga gttgattaaa gcaatttcat taaaattatc
    10681 taaaattttt tcaagttcgc ttttaaagtc ttgtttcttt aaaattttct caaaaaagct
    10741 ttcaaaactt cctgtattca aactatagca gtattgttct atggtttttt catctactct
    10801 taaaccacta aatttattaa gctcactcgc agcaagatat aagttttcat caaaacttgt
    10861 aaaaagagta aataaagcat tttgagtgat ttcaacccct agttgttttg cttttatgct
    10921 taaaagctcc acgccttctt tagctccgtt agctttaaaa aatcttacaa aatgaggaga
    10981 gaaaattttt tctatatcac tttgtttaga actttcatca taaagctcta aaagaaagaa
    11041 attgtccgta ttgtttttac aaagttcgac taaaacttta agatcttttg ttggaatttt
    11101 tttagaagtt ttgatttcta gtaatttttt ttcgctaaaa agcgatcctg cgcttaaaaa
    11161 atcactcgca cgagtgaagt tgtattcttc aaaaaaaagt ttcaaagttt catcgggctt
    11221 atatttttct tttataaatt cagcataaag ttcgctttga aaattatctg ctccataaag
    11281 aaagaaaaaa ttaggtattg aatctttaga aagtaagatt tgaagctctt ttctatacat
    11341 tttcttcctt tataagtttt tgggtgattt tagcataaat ttttgccata actatatccg
    11401 cttccatgat ttgcacttca acactttcta gcaaatttac acgcgtatca taaaggatta
    11461 tatctgctcc tttgatttca tcatctagtt tagctatgca aactccatca ttttgcacaa
    11521 ctaaagcttt aaattttttg cctatatttt tagctgccca tctagcaaat tttctatcca
    11581 taaaatcaaa agcaacctta tccgcttctc tttcaagcgt gctaagactc tcgcaagtgc
    11641 tttctatgtt taaaagcaga tagttaaaaa gtttttcatc gtttttttgt ttggctttta
    11701 aaagtctgtg taaaataaga tcagaatacc ttcttatagg gcttgtaaaa tgtgagtatt
    11761 tatcaaaacc taagccaaaa tgccctgcat ttatactgga atattctgct tttttttgtg
    11821 ctttgatgat gagtttatct acttctgctc ttaaatttaa ctcatcggct aaagcttgta
    11881 tgtcgcgtat gagttcagga agattgggtt taaaatttac atcgatgcct agttcgcgta
    11941 attcatttaa aagcttatcg atttttcttg catcagcact taagtgattt ctaaaaacac
    12001 ctatatctat gagttttgct gcggctttat tggctaaaag catacaatct tcgatcaaat
    12061 tatgcgaagg cgtgtctttt tcaaaaactg tgctttttag acttaaattt tcatctaaat
    12121 tcattcttaa ttcttcggtg cgaaattcaa aggcattttt aagacgcatt ttgcgtaaat
    12181 tttttgtgat ttcaaaaagc tcataaagcc atgaaagctc ttttaaatca ggtttttgta
    12241 tcaaaatttc atcaacttca tcgtaattaa aacggtgttt tgagttgata ataccttcaa
    12301 aaagttcttc ttttatgacc ttattttcat gatcgagtgt aattttaaaa caatacgcta
    12361 agcgatctaa atgaggtttt aaagaacaga tattttcact taaaggatgc ggtaacatag
    12421 gcatagcaat atgtggaaaa taaatagaaa atccacgatt tcttgcttct ttatctatag
    12481 cgctataagc ataaacatat tcgctaacat cagcaatagc tacataaatt tctcgttttt
    12541 gggtgtcaaa ataaatcgca tcatcaaaat cttttgcatg tatgggatct atggtgcaaa
    12601 aaggcaaggc tcttaaatcc atgcggtttt catacatact cgcatcaacg ctatctccgt
    12661 ttgctaaggc ttctttaatg caagcatcgc taaattcgtt atttttatta aaaagagcta
    12721 aagagatttt ttcatctacg ctttcatcat cgatatgccc taaaacttct atgatgttgt
    12781 tattttcatt ttctattttt aaaattgtcc ctaaaggcag tgcttttaag gatttttgag
    12841 aagcttttaa ggcagtgctt aatcctgttt tgatattcat tccaagcacg gcttggccat
    12901 accttttggt gatcactaaa gaagtttcat tggctttttt taaaaccaaa atcacctttg
    12961 cactggggcg ttttttcttt aaaggtagaa gttttactgc aactatatct ttatagtttg
    13021 cgccttttag gtttttgttt tctatcaaaa gatctttttt gaaactttca tcaaagcatt
    13081 gtaaaaaacc tgtgccttta ctcgaaatat caagtactcc aaaggcaaaa ccattgttaa
    13141 gatagtattt gtttttgtgt tctttaatga tatgattggt taaaagttct ctgaaaattt
    13201 gtttaaattc attgtttgct tcgtgagagc taatgccata actaagactg tttaaaaatt
    13261 ctttcacttt tgatacttta tgattttttg taaaattctt acataaagtt tataaaaaaa
    13321 atatgaaatt tatactttaa ttgctataat aataccttta atttttgaat ttttaaggag
    13381 tgaatatggc tattacagta tattatgata aagattgtga tttaaatgta atcaaatcaa
    13441 aaaaagtagc aattataggc tttggctctc aagggcacgc tcatgcgatg aatttaagag
    13501 ataatggcgt aaatgtaact atcggacttc gtgaaggtag tgtaagtgct gttaaagcaa
    13561 aaaatgctgg ttttgaagtg gtgagtgtga gtgaggcttc taagatagcg gatgtgatta
    13621 tgattttagc tcctgatgaa attcaagcag atatttttaa tgtcgaaata aaaccaaatt
    13681 taagtgaagg caaggctata gcttttgcac acggttttaa tatccattat ggtcaaattg
    13741 ttgttccaaa aggtgtagat gttatcatga tagcacctaa agcaccaggt catacagtaa
    13801 gaaatgaatt tactctaggt ggtggcactc cttgtttaat agctatccat caagatgaaa
    13861 gcaaaaatgc taaaaattta gccttaagtt atgcaagtgc gatcgggggt ggacgtacag
    13921 gtattataga aacaaccttt aaagccgaaa cagaaacaga tctttttggt gagcaagctg
    13981 tgctttgtgg tggacttagt gctttgattc aagcaggttt tgaaactttg gttgaagcag
    14041 gttatgaacc tgaaatggct tattttgagt gtttgcatga aatgaaactc attgtggatt
    14101 tgatttatca aggtggtatt gcagatatgc gttattctat ttcaaatact gcagaatacg
    14161 gcgattacat cacagggcca aagattatca ctgaagagac taaaaaagcg atgaaaggtg
    14221 ttttaaaaga tatacaaaat ggtgtttttg caaaagattt tatcttagaa cgccgtgcag
    14281 gttttgctag aatgcatgca gaacgcaaaa atatgaatga ttctttgata gaaaaaacag
    14341 gacgcaattt gcgtgctatg atgccttgga tcagtgctaa aaaattagta gataaagata
    14401 agaactaaac attgtcaaag aaaaaattag ttcaaattca gcgttattta atcatagcta
    14461 tacttttttt actttgcata gctttagctt tgggaatttt agtaaaatat caaaattccc
    14521 aagatgtttc ttctgttaag ccggattatt ttattgataa gcaagaagat ttaatttcat
    14581 taaataaaga tcattatgaa attggtattt ttcaagagaa tgagtttgat aataataaat
    14641 ctgtaagtat tttagagcaa aaaattcaag aaattgatga tttaaataca agtttaaatg
    14701 agcaaaattt aagcagtgtg aagcagaatt taagtttaga gcaaaatcag agtttagaac
    14761 aaaattttat tctaaaagat acaaatttaa cccaagatca aaatttaact tttaatgaag
    14821 atattcattt aaataaaatt tctaaaaaac caaaacttgc cattattatc gatgatatgg
    14881 caaatgcaag tcaggttaga ggtttaaaag ctttaaattt aaagttaaat ccttcttttt
    14941 ttccgccaga taaaaaccat agcgaaacgc caaaacttgc tttaaaattt gatttttata
    15001 tggtgcattt acctttagca gcaattaatt acaataaacc cgagcttgat actttaaatc
    15061 caaatgatag caaagaaaga atttttaaaa aaatcaagca aattaaaaaa gattttaagg
    15121 atttaagata tatcaacaat cacacaggaa gtttatttac aagcaatgaa gaagctatga
    15181 gaaagcttta cgaggcttta aaaaatcaaa atatattttt tgtagattct aaaactatag
    15241 gaaattctaa ggcaaataaa atcgctaaag aactcagtat gccttatata caaagagatg
    15301 tgtttttgga taatgaagat gatgttaatt atgttaaaaa acaacttgaa agtgcggtaa
    15361 aacttgcaca aaaaaaaggt tttgttatag ccataggaca tcctaggaaa aatactttta
    15421 aagctttaga gcaaagtaag gatttgttaa aaggcgttga tcttgtgtat ttgagtgaaa
    15481 tttatggcaa gtgaaatttt gcctgatgaa tttttagaac tttttaaaga tttaaaaaag
    15541 cctcctaaaa aattacacta taaaggaaat ttatctttat taaaacaaga taaaatcgct
    15601 attataggtt caaggcgtat gagtatttat acgaaaaatt gtgttttttc tttagcgagt
    15661 atgcttaaaa atgctcatct ttgtgtggta agtggcggtg ctttgggtgt ggatatcacc
    15721 gcaagtatgg cggctatgcc aaatactata ggtatttttg ccaatggttt agatcaaatt
    15781 tatccaagaa ctaatgaaaa aatcattaag caaatttatg aaaatgcttt agctttaagc
    15841 gaatacgaag atgattattt gccaaaaaat tatgactttt tactaagaaa tcgtttggtt
    15901 attgctttaa gtaaggctgt tgtggttgcg caagcagata taaaaagtgg ttccatgcaa
    15961 agtgcaaaac ttgctttaga acttcataag cctttatatg ttttaccgca aagactagga
    16021 gaaagcacag ggactaattt acttttaaat gaaaataaag caaagttaat ttgtgatttt
    16081 aaagaatttg taagtgagtt tgcaagtata gatatgaatc aagatgagtt tttagagttt
    16141 tgtaaaaaag gtgtgagtgt tgatgaggct ttaaaaattt atggacaaaa agtttatgaa
    16201 tatgaacttg agggaaaaat ttccatagaa gggcttttta taagggtttt agtatgagag
    16261 ctttggcttt agatgtaggt ttaaaacgca taggtgtagc gctttgcata gataaaaaga
    16321 tcgctttgcc tttagatgca gttttaagaa aaaatcgcaa tcaagccgct aatgaaatca
    16381 aaaatttact taaaatacat gaaatttctt tactcattgt aggcattcct aagggtggat
    16441 caagcgaaga agaaatgaca agacgcatta agcattttgt ttctttgctt gaatttgata
    16501 aagaaatttg ttttgtagat gaaagcggaa caagtaaaga agctttagaa tacggcgtag
    16561 ccaatacacg caaaaaagat ggtaaattag attctttagc tgcttttatc atgataaagg
    16621 attattttgc tctctagaat agaaaaactt tatactaaag atgaaatgca aaatatttta
    16681 tcttcttttg ctcaagaaaa aaatgtttgt gtatttgcaa atactttaaa aactagcatt
    16741 gaagaattag aaaaagaatt tttaaaacaa aatttaaaat ttaaaaagat caatgtttat
    16801 tgttatttgt ttgatgccaa agataaggct atcttaagtt ctatgaaagc ttttaatgag
    16861 gcgcactttt atatacaaaa ttattcttct tatttgtgtg ctttaaattt agaggtcaaa
    16921 gcagggcaaa gtgttcttga tatgtgtgca gctccgggtg gcaaaagtat caatcttgca
    16981 aattttatgc aaaatacagg ttatttagct tgcaatgaga tgagtaggga tagatttttt
    17041 attttgcaaa aaaatcttaa aaattacggc gtgaatgcta aagtttttat gaaagatggt
    17101 aaaaatatag gcaatttatg ccctttaaaa tttgataaaa tcttacttga tgcaccttgt
    17161 tcaacttttg ctaaaatagg ttttgatttg gaaaaaagtt ataaagaaat caaaaatatt
    17221 gcaaaaactc aaaaaaaaac ttctacattc tgctttaaag gcattaaaaa taggcggaga
    17281 gcttgtatat agtacttgca cctttaccaa ggaagaaaat gaagaagtga tagagaatgc
    17341 tttaaaaagt gagtttaaat tagagctttt agatattgat ttggaaaatg ttgaggctaa
    17401 agcagggcaa agtgaagaat ttgctgaaat ttcaaaatgc agacggattt taccaagctt
    17461 agactatgat ggatttttta tagctaagct taggaaatta tgttaattga taaaattatt
    17521 cacatttaaa tacaaattca taaaaaaact taaaaaacaa taaataattt tttctttatt
    17581 ttaaagctta aagttctatt tttaagtact ttgaaaagaa aatcacagcg tgaaaaggct
    17641 gtgaataaag ttgaaatttt tttaacctta aaaagatgaa attagtctga ttgtattttt
    17701 tgcagttttg gagctattat agcttgacaa tatccttgat tgggattatt tataaaataa
    17761 tgttgatgat agttttcagc tttgtaataa gtttgcaatc ttgaaatttt agtaactatt
    17821 tttttgctaa atattttttg ctgttcttcg atgaaatttt gagctaaaat tttatcttct
    17881 tcattttcgt aaaagattat tgagcgatat tgtataccaa tatctccacc ttgtttatct
    17941 atacttgttg gatcatgaat tttaaaaaag agtgttaaga tttcaagaag agagatttgt
    18001 ttttcatcgt aatttatttt gacaacttct atgttgccat caccattaca cacgctttca
    18061 tagctaggat ttggatttcc tccgctatat ccaacttcag tatcgattac accttttagg
    18121 cgttcaaata cggcttcaac acaccaaaaa caaccaccac ctaaaacgat atttttcatt
    18181 gcgagttttc cttaagctta gccctttgaa gggctaggat tatttatagt ttttgattgc
    18241 tttttctaaa atttcaattg cagctttctc atctttgaaa tcttgcactt taacccattt
    18301 atttggttct aaaattttat aagtttcaaa gaagtttttg attttattta aagttgcttg
    18361 tggtaaatct gtgtaagttt ttatattatc atatctcgca tctatttttg aatttggaac
    18421 tgcaagaagt ttttcgtcca ttccactttc atcttccatg attaaaacac cgattaagcg
    18481 gcaaggaatc acagctccag cttggatagg atattcatta agcactaaaa tatctacagg
    18541 atcaccatca tcagccaaag tattagcaat aaaaccatag tttgctgggt aaaacatcgc
    18601 gctagccata acgcgatcta ccatgatagc accgctatct ttatcgattt cgtattttat
    18661 atttgagcca tatggaattt caattacggc attgatttta tttggaatat ctccgatttt
    18721 gattttgttt aaattcattt tttctcctta tatactttga atttttttaa tcagttcttt
    18781 catgtctgca acgataggtt cgatagcgcg ctctccatcg ataataaaat gaagtttttt
    18841 cttttgataa aaatctaaaa tttcatttaa aggttctgta taaactttca ttctattgta
    18901 aaacacttct tcattatcat ctgcgccacg atttctgcct aaaactcttt ctttggcaac
    18961 ttcttcgctt actcttactt ctatgacgcc tttaagacaa atttcatttt gctcacttaa
    19021 aaccttatca aattccatca tttgctctac gcttcttgga tagccatcga tgatgatagt
    19081 tttagttgga gcagctttta gagcacaaac tatagtattt ataacaacat ctaaaggaac
    19141 aagattgcct ttggagataa aactatctat agtttttcca agctcgctcc cacttgctac
    19201 ttcagctctt aaaagatctc ctgttgaata gtgtgtgata tttgtcgcat ctgcttgtgc
    19261 gattaaacta gcatcggtag tttttccact acctggtgca cctatgatta aaaacaattc
    19321 tttcatttta tattctccct taatttgatt cctaattctc tcattgcttc attgctagca
    19381 ggcgatggtg catctgtcat taagcattgc gctctttggg tttttggaaa ggctataacc
    19441 tctcttatgt tgtttgctcc tgtaactagc atgatgagtc tatcaagtcc tatagcgata
    19501 cctccatgtg gtggagcacc aaaacttaaa gcatcaagca agaagccaaa tttttctttt
    19561 tgttgttctt catcgatatt taaaagttta aatacttttt gttgaatatc atttttatgg
    19621 attcttatac tacctccacc tagctcaacg ccatttaaca ctacatcata agcaatagat
    19681 gaaatttctt ctaaatcagt ctcatcaata ttttttggca tggtaaaagg atggtgcatc
    19741 gcagaataac ttccgtcatc attttgctca aacataggaa aatcaacaac ccataagaat
    19801 tccaaggcat ttggatctat aagttttaac tcgttggcta agaaaattct aaatcttccc
    19861 atataatcaa gcacggtttt tttagctcct gcaccgaaaa ataccacatc tcctacttca
    19921 agctcacagc gtttgcttag ctcatttaaa tcttcttcgc taaagaattt acaaagtgga
    19981 cctttaagcc catctttttt aacttgtatg aaagctaagc cttgggcgcc aaatttacgc
    20041 acaaattctt caaatctttg catttgtctt tttgaaaaaa tagtatcgcc ttttggaacg
    20101 cgtatggctt tgatgcgatt tttctttgta tctttggcaa tatttgcaaa aatttcatta
    20161 tttgacttag tgaaaatatc aatcacatca ataaatttaa gatcaaatct taaatccggc
    20221 ttatcagagc cataattttc catagcgtct ttgtattgca tttgtctaaa aggggtttga
    20281 atttctttgc cgcaagcttt gaaaatatct tttaaaaaag tttcagctac cttgatcaca
    20341 tctttttgtt cgcaaaagct catttcaaca tcaatttgtg tgaattcagg ttggcgatca
    20401 gctcttaaat cttcatctct aaaacatttt gcaatttgaa aataacgatc aaaaccgcta
    20461 cacattaaaa gttgtttgaa aagctgaggg ctttgtggaa gagcataaaa ttcaccctga
    20521 tgcacacgag aaggcacgag ataatctctt gcgccttcgg gagtagcttt ggtaagaata
    20581 ggggtttcaa cttctaaaaa tcccatattt gccaaagaat ttctagctgc tatacaagct
    20641 ttagaacgca aggcaaaatt ttcataaagt ttaggatttc ttaaatctaa aaagcgatat
    20701 tttaagcgta attcttcatt tacactttca tcagcgatag caaaaggagg tacggcactt
    20761 tcattttcta tggtaagttt agaaacaact acttcgattt ctcctgtttt taacttagga
    20821 tttacaagtc cttcgccacg cggacgaata gtaccttctg taataagtac aaattcattt
    20881 cttgcattgg aagcgatttc atgagcttct ttactatcat ttggatcgca aacaagttgg
    20941 ataataccgc ttctatctct taaatctata aaaataactc caccatgatc gcggtagcta
    21001 tttacccaac cgcaaagttt aacgctttga ccaacatggg aaattcccaa gtctgtatta
    21061 taatgacttc gcaaatttat tccttgaaaa agatttttta agataatgag caaaattata
    21121 gtatttttat tcttttgctt tgctaagatt tgatataatt ttttatgcaa aataaaatag
    21181 attataaaaa tattaaaaaa attggacttg ttacgcgacc caatgtgagt ttagataagg
    21241 aaattttaaa acttcaatcg attttatcta tatataaagt tgaacttgta ttgcttaaag
    21301 aaagttctga aattttagat ttgccaaagt atggattgga tgatttgttt aaaatatccg
    21361 attttgttat ttctttaggt ggagatggaa ctttgatttc tttatgtcgt aaagcttgtg
    21421 aatatgataa agcagtttta ggaattcatg ctggacattt aggtttttta acagatttta
    21481 aagttgatga agctgaaaat ttttttcaag ctttttttca aggagaattt agaatagaaa
    21541 agccttattt gttaagtgtt tttttagaag ataagcaagg aaaaatttta gaaaaattag
    21601 cttttaacga tgtggtcatc agtaaaaaca atcaagcttc tatggctcat atagaagttt
    21661 ttagaaaaga aaagaaattt aatgaatatt ttggagatgg gcttattgtt gcaactcctg
    21721 cgggttcaac agcttataat ttaagtgcaa atgggcccat agtttatact ttagctcaag
    21781 cttttatctt aactcctgtt tgttctcatt ctttaacaca acgccctatt gtcttaccaa
    21841 aaggttttga aatagagatt atggcaaagg attgtatact ttgcattgat gggcaagaaa
    21901 attataaaat gaatgatttt aaaagtataa aagtgggttt aagtgataaa aatgtggctt
    21961 taattcaccc aaaaaatagg gattattttc aaattttaaa agaaaaatta cactggggaa
    22021 attgatgata aatagaattt ttatgaaaga aaatcttggt tttaaaaagg ctgagcttga
    22081 aatttctaaa ggacttaccg tttttacggg gctaagtgga gctggaaaat cagttttgtt
    22141 taaaggaatt ttatccgcat tttctttgag tgaaagtgag gctaaaattg tcgaaataga
    22201 actagatgat aagttggatt tagaaagttt tggtatagaa agtgaagagg agaatgtttt
    22261 taagctttta aaagaaaaaa acacaaaata ttttattaac aatcaaagca tagcgaaaaa
    22321 aagtttgcaa aatttaagta aaacttttat taagtattta agcgcaaagg aaaataacga
    22381 atttggaaat gaaaaatttt taaatctctt agatgccttg gagatgcaag aaaatacaaa
    22441 ttttgtttcc tttttagaag attttaaaaa agattttaat gcttatagtc aaatttctaa
    22501 tgagcttaat gcaattttag aagaagaaaa aaaagtagaa gaattaaaag aactagctag
    22561 agcacaaatt gaaaaaattt caagcattaa tcctaaaata ggtgagtatg aagagctttt
    22621 aatacttaaa aaaaagcttt ctaaaaaaga taaattagaa gaagcttgga gtaaggcaga
    22681 gcgtattttt gagcttgaaa aagttgttat tgaagcttta aatttaagcg aagttgatgc
    22741 gagttttttt agtgaatgtt taaatgaatt gcgtgtgatt tgcgaaaatc aaaaaatgga
    22801 agatttggat tttgatgtgg agacactttt agatcgcatt gaaaatttat cctatctcat
    22861 taagcgttat gaaagcatag aaaatgcttt agaagtttta aaacaaaaaa aacatgaact
    22921 agaacattat gaaaatttaa gttttgaaaa aaaagaactt gaaaaaaaat ttcaagaatt
    22981 aaaacaaaaa ttagaagaaa aagcacaaat tttaactcaa gcaagaaaga aaaaccttaa
    23041 aaaattagaa aaatgtttaa ataattatct taaagatctt tatatgaaag atgcaagttt
    23101 gacgcttaaa gaaaatgaaa aaatttcaat tttaggcaaa gatgagataa tgctagatat
    23161 taatttagct catttaaaaa atttaagttc gggtgaatta aatcgcttaa gacttgcttt
    23221 tatagccaca gaatgtaata ttttaaatgc aggcaaaggg atattatttt tagatgaaat
    23281 tgatgcaaat ttaagtggaa aagaggctat gagtatagct aaggttttag aggaactttc
    23341 taagttttat caaatttttg ctatttctca tttgcctcaa ctttcctcta aggcacataa
    23401 tcatttttta gttgaaaaaa atggtgaaga aagtaaggta aaaaagcttg atcaagaaga
    23461 aagaattaaa gaacttgcta ggatggtaag tggagagctt gttagtgatg aagcgatcga
    23521 atttgctaag accttattta agaattaagc ggatttttta ttttgctatg ttaaaatata
    23581 taactataaa aatttccttt cttttgaaac aaatataata aaaaatttta gatataaagg
    23641 tattttacac actatgaata agaaaatttt aattattgat gacaataaaa tgctcggcaa
    23701 acttttggct aaaaaaattc aaatgacttt agattatgag gtagatattg cttttggttt
    23761 tgctgaagct aaggagttaa tgaataatga ttatttttta gcttttgtgg atttatgctt
    23821 gccagatgcc ccaaatggtg aagttgtgga ttatgttata gaaaagaaaa ttcctgctat
    23881 tgttcttacg gctagtggtg ataaggctac taaagaaaaa tttatggata aagatatatt
    23941 agattatatt tttaaagaaa gtgaaacttg cattgatgag attattagtt ctattgtaaa
    24001 acttaatcaa tatgcaaaaa ctaaagtgat tgtagctatg agcaagctac ctgaacgtaa
    24061 tgaaattaaa aaaatactta ctcaaagaca atttaatgtt ttagctgcgg ctcatggcga
    24121 agaagcaatg agttatttaa atgataataa tgatgttaag cttattatag cagatgtcaa
    24181 tatgccagta attagcggtt ttgagctttt gactcaagta agagaacgtt ttagtgatga
    24241 tgaattaggt gtgattcttt tgggggatca taatgattca tttgaagcga attcttttaa
    24301 aaatggagtt aatgagtatt tgtttaagcc tttaagcaag gaaagtttta attgtcgctt
    24361 agatcgttgt ttatcttaca tggatgataa aaaattttta agcacttata atgttttaga
    24421 tcctgtatct ggggttaaaa attataatgc tttaatcgat ggaatagatg attattttaa
    24481 cgaaatagca acaaaagacg aggaatttgc ttttgctttt ttagatatag ataatcttca
    24541 aatgattaac gatgaatacg gccgtgaagt tggtgatgaa gtaattaaaa tctgcgccaa
    24601 tgaaatagtc aatgaaacta aaggaagaga tcttgtaggt agatatagtg cagaaaaaat
    24661 ttgtattttg cttaaaaata tatcccaaga aagagcgatt aaaatctttt ctcgtatacg
    24721 agtaaatata aaaaaggctg gtgttttagt taatttagat gaagtctttt ttacagcttc
    24781 tataggcgtg gtttttggaa aaagtggaga taagattgat tctttggctg ataaagcaag
    24841 taaaatattg tctcaagcaa aagataatgg caaggataga gttgaagtat gttcttaaat
    24901 cttgattttc aagatggttt aaggattgtt gatactcatt gccatctaga cagtgaagca
    24961 tttaaagatg atttagatga aactttaaat cgtgctttta aaaatggtat agataaaatt
    25021 atcatacctg gtgctgatat aaaagacttg ccttatgcag ctacaattgc tcataaatat
    25081 aaaaacattt tttttgcagc aggagtgcat ccttatgaaa ttgataatta tgatgagaaa
    25141 attttaaggc agtatttatg cgatgaaaaa tgtgtagctg taggtgaatg tgggcttgat
    25201 tatttccgtt ttaaaagtga tcttgctgaa gaaattcaaa aagaaaaaga aaatcaaaaa
    25261 aagattttta tcgcacagct tgaacttgct attgaattta aaaaacctgt tatcattcac
    25321 tcaagagaag caaatcatga tacttatgag attttacatg ggtattctaa ggatcttgta
    25381 ggaggagttt tacactgctt taatgcaagc gaacatttac taactctttt tgaagatgga
    25441 ttttattttg gtattggggg agttttaact tttaaaaatg ctaagaaatt agttgaaatt
    25501 ttacctaaaa ttccaaaaga tagactacta cttgaaactg atgctccata tcttactcca
    25561 gagccttatc gcggtaaaag aaatgaacct ttgttaactc aatttgtagc aaacaaaatg
    25621 tgtgaagtat tgaatttatc aagaaaagaa cttctagaaa tttgttttaa caattctgaa
    25681 aaattatttt ttaaaggtta ttaatgaaaa aaattttatt gtgtttttta atatgtttta
    25741 attttctttt tgcacaaatt aatactcctg aattttatga aagacaaatg aatgttttaa
    25801 gaaatttaga tattaatcca agttttatca gtgatttgat ttttgtgcaa actcaacaag
    25861 atataaaatc aaaacatgct caaactttaa tagatagcat gcaaaatttt tcaaaagtta
    25921 ctcctatgat aagaaaaatt ttagcccagc aggaagttcc tgatgagatt ttgtatctag
    25981 ctatggttga atcaggcttg aaaactcata gcgtttctaa tgccaaggct gtaggggttt
    26041 ggcaatttat gcaaccaaca gctagaaatt tgggtttaag aatcgatgct tatgttgatg
    26101 aaaggcgtga tccagtcaag tcaacttatg ccgctacaaa ttatttaaaa gagttaaaag
    26161 aagaatttgg caaatggtat ttggcacttt tagcttataa ttgcggaaat ggcaagctaa
    26221 gacaagctat caagcaagca ggaagtgatg atttaagtgt tttattgaac cctgataaga
    26281 aatatctttc tttagaaact agaaatttta taagaaagat tttaacgctt gcttttttag
    26341 ctaatgatag ggatttttta ctagataaag atgcgtcttt aatgaattat gctttaagca
    26401 atgaatttgc aaaagttgat gtgccttctt ctgcatcttt aaaagaaata gctaaaaatt
    26461 taaatatgga tcttgcaact tttaagaaat ataatccaca atttaaacat aattttacgc
    26521 ctcctggtaa agggtattat atgtatatac cacttaataa agtagcattt tttgataaaa
    26581 attttaaagc agaaaaactt gcaaaggttg atacaactat acctatgaca agaacttata
    26641 ccgttaagtc tggtgactct ttatataaaa tagcaaaaaa ttataatata agcgttgatg
    26701 aaattcgaga atttaataaa atagcaaaaa atcatcttag tattaatcaa aaattaatta
    26761 taccaatcaa ggagaataaa aatgcaaata aaaacaatta cactaaagtt gtcagccgtt
    26821 agtctagggg ctttattttt tagtggttgt ttaggcacta gttttttttc tagcttggat
    26881 aatgctcaag tgtattatcc ttcaaatgat tttaaaagca gtcctagttc ttcagggact
    26941 aaaggaacga tgaagcctta tactatcaac ggtaaaactt attatcctac tgttgtagca
    27001 gtaggcgaaa ctgctgatgg tattgcgagt tggtatgggc caggctttca cggcaagaaa
    27061 acctctaatg gcgaaaccta taatcaaaat gctttaaccg cggctcataa aactttacct
    27121 atgaatacca tcttaaaagt aaccaatcta aataacaatc gtcaagttac cgttcgtgtg
    27181 aatgataggg gtccttttgt aaataatcgt attatagatt tatcaaaagg agctgctagt
    27241 caaattgata tgattgcttc aggaacagct ccagtaaggc ttgaggttat aggatttgga
    27301 tcaagtaatt cgggtaataa tattgtacat tctaatgtaa actatggaaa tagtggagag
    27361 attgcaaata atggacaaat ttatgaaggt ggaaatttca tggttcaaat tggagccttt
    27421 aaaaacccag ctggagcaca aacgatagca gcaagatata aaacttatag aacttatagc
    27481 tctactatac gcacaagctc agtggatggg ttaaatcgcg ttttcttaac aggctttaga
    27541 agtgaagatg aagcaaggga ttttgctgca agtggtgcat ttgcaggtgc atttgttgta
    27601 agagagtaga aattatgaca gaattgattt ttttggatgt agatggctgt ttaactgatg
    27661 ggaagattat ttatacttct aatggagaat ttattaaaga atttgatgta aaagatggag
    27721 cggctatcga ggcttggcta aagcttggta aaaaaattgc tattattaca ggtagaaatt
    27781 gtccttgtgt tgaaaaaaga gctaaagatt taaaaataga aattttatat caaggcatca
    27841 aggataagtt agcttgtgca aaagaaattt tacaaaaact taatttagat ttttctcagt
    27901 gtgcagctat tggggattat tttaacgata aggctttgct tgaaagtgta ggacttagtt
    27961 ttaagccaaa agatggtcat aaaaatttaa atgtagacat agtgcttagc aaaaaaggtg
    28021 gtaaggctgc tgtagcacag atgatagaaa ttttagtaga aaaaaatcat ctaaaagaag
    28081 aatggaataa gctttggcta taaaaatttt tggaatttta attgctcttt ttacaattac
    28141 ttttacgatt ttaagtttgc aagatccgta ttctttgaat ttgcaaacta atgctttaaa
    28201 ttttaaaaat attgaggcta aaaatttgaa agcttatgag agtaatgcta gtacaattaa
    28261 ggcatattat aaggcaaatt cttgggtgag atatgcagat agagatgaat ttaatgattt
    28321 tattacttta aatttagatt ttaatcttag tgcgaatcgt ttagagtttt tcaataaaga
    28381 tatgagcaag gttttgtttg aaggaaatgt tacttatata ggttctaata atgtcaaaat
    28441 tatttctcaa gaggtagaat accaacctaa ggataaaatt ttacacacaa atactaattt
    28501 taaagctctg atcaatggaa gtattattaa cggaaatact ttaaactatg atataaaaaa
    28561 caaaatttta aatatccaag gagtaagtgc gtggttgcaa gacaaataat tttattgtta
    28621 gcttgtgtaa gtgtaacttg ggcaactcaa attgaagtaa aagctttaaa tttttactca
    28681 gatgaaaata agggtgaaag tattcttagt ggaaatgtag aagtaattag aggtgatgat
    28741 attttaaatt ctgaaaaatt gattatttat acggataaaa atcgcaaacc tattcgttat
    28801 gaagcaatgc aaaatgctag gtttaagatt gttttaaaag gtaaaactta taaaggtagt
    28861 ggagataaat ttatttataa tgttattaaa gatacttacg agattaatgg tcatgcttat
    28921 ataaatgagc ttggaagcaa tcaaaaactt tttggtgata aaataatagt cgatagaaaa
    28981 gctaatattt atcgagtgga gagtaaggat caaaaacctg ctcgttttgt gtttgatctt
    29041 aaagacaaat gataattagt gctaaattta tcacttcttt agtgaaattt gatgagaatt
    29101 tgagctcaaa ttttagtgaa gtagcatttt tggggcgttc taatgtcgga aaaagttctt
    29161 taatcaattc tttgtgtaaa caaaaaaatt tagccaaaag ttcggcaact cctggaaaaa
    29221 ctcagcttat aaattttttc gaagtaactt gcaaaagaaa tgaagaaaaa tttaatatca
    29281 attttatcga tttaccaggg tttggttatg caaaggtttc taaaaattta aaagaaatat
    29341 ggaatcaaaa cttagatgaa tttttaaaat taagaacctc gataaagtta tttatacatt
    29401 taatcgattc aagacatatt catttagaga tcgatgtaaa tttaaatgac tatttgaaaa
    29461 gatttttacg acctgatcaa aaaattttaa aagtttttac caaatgcgat aaattaaatc
    29521 aaagtgaaaa agctaagtta aaaaatgaat ttaaagactc tattttagtt tcaaatttga
    29581 ataaatttgg ccttgattct ttggaagata ttattatcaa tcaaacttta ggtcttggta
    29641 aatgagaaga aatttaagtg cttataaagc aaaatttaat ggagcttatg tctttttagg
    29701 attttttttt ctaatctatc agattcttgg ttcgactttt gtatatgctc cgttacttta
    29761 tgggattttt ttctgttata tgttttgctt actagaagag agagaaagaa ctttttcaag
    29821 gcttgatttt agatggtatt tttctttatt ttttttattt tttactgata taacttataa
    29881 tttttttatt ttttcatctt ggttggcatt ttttattttt tattaccttt gtgcagattg
    29941 gattaagaca aatttgaaaa ttggtaaatt tatccctgtt gtttttgtgc tttgtgctta
    30001 cggcattatt ttgtttttgg atatgatatt gttttatatt ggagatgaaa aaaataaaat
    30061 tttaggatgg gcgtatattg tttcagtttt tatagaatgt tgtttagctt atgtgttttt
    30121 taaaggtaaa atttaaatga gaatgcgttt agttgttgga tttatactat tgttttttat
    30181 atttttatta agtcgtgtgt attatttgag tataaaatca aatgtatatt atgaagagct
    30241 tgctaaacaa aatgccataa aaactgaatt tttaccacct gttaggggtc aaattacaga
    30301 tagaaatgga actttattgg ctattaatga tttgggtttt agtatttcta ttaaacctta
    30361 tttaagtatt aaaaagtcaa ataaaggaat tttagataaa gaattatctg aacttacaaa
    30421 tttatttccc gatttaaatg ctagtaaatt agcagaaatt tataagagaa atgattctta
    30481 ctataatcaa gattttatta aagttgtaga ttttataccc tacgatgaga ttattccaca
    30541 ttattcagag ttaaacctta ataaaacaat aaaaatagat cctgttgtaa aaagaaaata
    30601 tccttttgga aaattggctt cgcatattat tgggtatgta ggtaaggcaa atttgcaaga
    30661 tgttcaagaa aatgaaatag caaaactttc taactatacg ggaaaaagcg gtatagaacg
    30721 ctattataat gatattttac aaggagaaaa aggaactagg gtttataagg ttaatgcctt
    30781 aaatcaagaa gtagaacagc tttcttacac tcctgctatg tctaatgata tagaacttac
    30841 gatagatata gagcttcagt cttatttaac ttcattgttt gaagggaatg ctggagctgc
    30901 tataattatg aatgtaaatg atggatctat tttagctgca gggagtttcc ctgaatatga
    30961 tcttaatcct tttgtaacag ggatttcttt taaggattgg gatgagcttt caaatagtct
    31021 tgatcatcct tttacaaata aacttataaa tggatattat cctccaggtt ctgttgtaaa
    31081 aatgggagta gggctttctt ttttaaattc taaaaatatt agcccgtcga ctcaatatgt
    31141 ttgcaatgga agcattgagc ttggaggcag gttttttaga tgttggaatc gatcaggcca
    31201 tggacctgtg gatttaaaac atgcgataaa atatagttgt gatgtttatt tttataatgg
    31261 cagtttgcaa gttggaatcg atcaaataag tgaaacttta tctcgcattg gctttggagc
    31321 gaaaacaggg gtagatttac ctagtgaatt tgtaggaact ttaccaagca aagaatggaa
    31381 gatgcaaaga tatagacaat cttggtttca aggtgatact ttaaatacag ctataggtca
    31441 aggtaatttt cttgcaacac ctatgcaaat tgctagatat acggctcaaa tcgcaaaagg
    31501 tggagaggtt atacctcatt ttttaaaaag catagaaaat aataatacaa ctatagaaaa
    31561 tcaaatggat gaaaataaaa aagaaatttt tactttattt gaaaagagtc aattgcctta
    31621 tataagagat gcaatgtatg ctgttgctaa tgagcaagga ggaacctctt atcgttattt
    31681 gcataatctt gatgtgaaag ttgcagcaaa aacaggaact gctcaggttg tgggattttc
    31741 acagacagat aaaaataggg tcgatgaaaa acaatttgag tattatacta gatctcatgc
    31801 gtggcttact tcttatgctc cttattctaa gccaaaatat gtagttaccg ttcttttgga
    31861 gcatggtggg agaaatatta cttcaggggc aactgtagct aaaatttatc aaaaaatgat
    31921 tgaacttgga tattttaaat aatttttagt tgtaaattga gtttttcaaa aaaaactttt
    31981 ttagcaattg gtttaaaaat cttgtattaa acaaattata agtttaatac aaggaaaatt
    32041 tatctatgtt aacaaaagta tcttaaaaga tggcttttgt tcttttttca agccaaacta
    32101 gagcttttgg ataatcacct agcttaggag aaagtttttc aaatacttct ttgtgataat
    32161 tgtttaacca ttctttttct ttttcatcta acatttttgt atcaatacaa gatatttcaa
    32221 aaggacaaag agtaacaggt ttaaagtata aaaactctcc aaaatcttta tttttaggat
    32281 tttctacttt ggtatgaata actaaatttt caagtcttat accccattta cctactttat
    32341 aaatacctgg ctctatggag gttagcatac cttctttggc ttttgttttt tcaagcacag
    32401 gggatagata agataaaact tgtggacctt catggacatt taaaaaatat cccacgccat
    32461 gtcctgtgcc gtgtatatag tcaatttgtt ctttccataa aggtgcgcgt gtgattgcat
    32521 caagtaaggg catagctata tcttttggaa aaattgcact ggaaatggca atatgtgctt
    32581 ttaaaaccaa ggtatagtca tgaatttgtt ctgcattagc ctttcctatt ggtacaacgc
    32641 gtgtaatatc tgttgtgccg tttttatatt gtccaccaga atcaataagt aaaagcccat
    32701 cttttttaag ataagcaaaa ctctcttttg tggctttata atgtggatat gctgcatttt
    32761 cgttaaagcc tgctatagtg gcaaaactat cacttatgta gtacttgctt tgtgctctaa
    32821 attcgcttgc tttaacatct atgtctaatt cgcttattag ttctttattt tctatcgctt
    32881 cttcaagcca ggcaaaaaat ttacataaag ccactccatc ttctatcata gcatcttgta
    32941 tatgcgctat ttcttttgta tttttagctg cttttaagtg agtgcttgga ttaatttctt
    33001 gaatgatttt tacgctttta tctaaagaat ttatgagtaa agcggtcatt tttgaaggtt
    33061 caataagcaa atttgtattt gcaagttttt caagctccat gatgatttca tcataatttt
    33121 taagccaaaa cccatctaaa tttaattttt tttcaagttc tgaatttact tttttctgat
    33181 caacaaaaag caaggctttg tcttccaaga ttagcaaatg acttaaaaat acaggattat
    33241 aatttacatc attccctctt aaatttgtaa gccaagctat atcatcaagg ctggagatta
    33301 aatgagaggt aacatttaaa tttttcattt tttgacgcac taatgctaat ttttcttttc
    33361 ttgagtaaga gtagtattct agttcgtgtt cataaatttt ttcttgtggt aaagtgggac
    33421 gatctttcca aagtggactt atcaaatcta tatgttttaa atttgccttg caattaatct
    33481 ttaaatcttt ttgcaaagat aaaggtaaaa gtgcaaaatc gatgcctaaa atttgatctt
    33541 cgcttaaatt tttttccaac catttggtaa aagtattttt agcatcttgc ttttgtaaaa
    33601 gtatgccact accttctaat tccttttgtg cttgaagcca atatcttcca tctacccaca
    33661 aaaagccctc ttcttgtgtg ataagaactg ttccaacaga acccttaaag ccactgataa
    33721 agactctgtt tttgtaatat tctggtaaat attcgctcaa atgcggatcc gcgcttaaga
    33781 tgagataggc gtcaatatta ttttctttca ttaatcttct aagttctaat actctttgtt
    33841 tgtaaatact catattttct ccttaatatt aatttttagt attttattga taggtttttt
    33901 gagtataagt aaaattataa cagcaccaag taatatccac atacattggt aaaataaatt
    33961 tggcaaataa gctatatttt cttcacttgc tttaccacct atgaatccag ctaaagcatt
    34021 gcctaatgca cttgctacaa accaaagtcc catgacttga gatttaatta aattaggtgc
    34081 aatttttgtc attatagaaa gtcccacagg ggaaaggcaa agctctccta aaaccataag
    34141 caaaaagcta ctgacaagcc accaaggtga aactaaaata atttgtgatg aattttctaa
    34201 attttctctt aatgtattag catcgccatt taaactaatt gcatgatttg aagctaaagc
    34261 cattattaaa aatgccaaag ctgcacccaa aagtcctaat gcaaatttaa taatagatga
    34321 aatttcttta ttatttttgg cacatatagt ccatataaaa gcactaaaag gtgcaaaaag
    34381 tataacaaat aaacctccaa gagattgaaa ccatattgta ggaatttcat aatttaatat
    34441 ggttttatct gttaattttt ctgcaaaaaa attaaaagaa gtgtattgtt gctcatatac
    34501 tgaccaaaat aacgcagccg ctaaaaataa aacaataaaa ataattaaat ttcttttttc
    34561 ttctattttt aaagaagtaa aagcgaaaag atataaaaaa taaattccag cacaagctaa
    34621 gatagttaga ataatatttt tattaataac ttgtgcatct aattttataa aaccaccaag
    34681 gattaaaaat attgctccaa gcaaaacaat acctgataca atgatgatgt aaaatgcgtt
    34741 tttgcttttt ttgcttggtc tatcccaagt agagtctatg ccaacttttt catcaaattc
    34801 ttttaaatca ggcatagttt ttaggtagaa aataattacc gctaaaagca taccaatccc
    34861 acctgcacca aaaccaaaat gccatccgta ttctttttgt aaaaagccgc aaattaaagg
    34921 agctacaaaa gcaccaaaat taaagcacat ataaaaaaga gtaaaaccag agtcacgcct
    34981 tgcatcattt tttttataaa gcatgccaac cattacagaa gcacaagttt taaaaagtcc
    35041 tgtgcctata accaaaaaaa ccataccaac aaaaatcatt ttattgttaa aataagaaaa
    35101 ggctatacac aaatgtccaa atgctatagt taaagcacct agtaaaattg ctcttttttg
    35161 tcctaagtaa ttatccgcaa gccatccacc tggcaaagca gcaagatata aacaacttgc
    35221 aaaaattccc ataattgcac ttgcttcttc aggttttaag ttcattccac ttttttcaaa
    35281 acttgccatc ataaaaaggt aaagcaaggg acgaattccg taaaaagaaa atctttccca
    35341 aagctcagta agtgaaagag ataaaagtgg ttttggatgt ccaaaaaatg aagtatctaa
    35401 attttttaca tttttactca atttatatcc tttgtgtatt tttatttata aattatagac
    35461 aagaaattaa aaaatatgta taactttgta atatttttaa atgatttata tcataatgtt
    35521 acttttttgc aaatataaaa caagaaatat taagatcaat tttcaacttt ggtgtatttt
    35581 gtattttaag tttaattaga taattgctta tttttttcgt taagaatttt ataaattggt
    35641 tttttagcaa taaaaagtaa aagcgctaca acaaaaagca tccacatgca ttgtccaaaa
    35701 atattaggaa gttgatcgat gtttttaata ttgacatttc ctcctataag tcctgcaaca
    35761 aaatttccaa gtgcacttgc tacaaaccaa agtcccatga tttgattttt gattaaatca
    35821 ggggtaacct tagccattat agagagtcca ataggagaca cgcatagttc cccaagtgtt
    35881 aaaaagaata tacttatgat aatccaagcc atggatattg gcaaaccatt gttgtttatt
    35941 agattttgtg aagcaaaggt catcatcata aaaccaatac cggcaaataa tattcctaaa
    36001 gtaaattttc caatggaaga aaaatatata ttttttttct ctaaaaatat ccaaatataa
    36061 cttgctatag gagcaagtat gatgataaaa attggattaa aagattgaaa ccagtttgtt
    36121 ggaattttcc aatcaaaaat atttctattt gtaaaatctt gtgcaaaaag attataagcg
    36181 gtaggttttt gttcaaaagt actccaaaaa aaagtggctg caaagaataa aacaattaaa
    36241 attgttaatt gctgttttct cttttattta aggttttaaa aacaaaaaga tatatgaaat
    36301 aaattaccaa acatagtaaa attacaatta gaagtttttt tgatagtatt atgggattaa
    36361 tatctgcaag attaataaaa attagaaaaa atccaataat acttaacaag cttatactta
    36421 gtataagagt taaattttta cttttttaaa tggttgttcc cagttttgct ttaaagtaca
    36481 atttttatga aattcttcaa gctcaggggc agctttaaaa tataaaataa gcaaagagat
    36541 tagcatacct aaacctccta tgccaaatcc taaatgataa ttccattttg cttgaacaaa
    36601 accacatata agaggagcaa tgaatgctcc aatgttaatt cctatataaa aaatcgtata
    36661 gccagtatcg catcttgtat cattttgttt atataacatt ccaactgtta cagaagcgct
    36721 agttttaaaa aatccagtac caataacgat aaaagtaagc cctagaaaaa cataggtgtg
    36781 cttaaaatag ataaggctat gctaatatgt cctaaagcta taataaaaga acctagaaat
    36841 aaagcctttt tttgccctaa ataattatca gtaatccagc ctccaggaag tgctgctaaa
    36901 tacaagcatc ctgcaaaaat gccataaatt gccgaggcgt attcagtgct tattccaagt
    36961 ccacctttgt ttatggttgt tgccatgaaa agcacaagta aagatcgtat gccataaaaa
    37021 gcaaatcttt cccaaagttc taccattgat agagagaata aaggcttgcg atgacctagg
    37081 aaatttgtat cgagtttttg tatttcttgt ttagtcactt cccaatacct ttctttttta
    37141 tgcttaaaat attttaacta atagcaatag aaa
//
LOCUS       DAPIWB010000007        36646 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.007, whole genome shotgun sequence.
ACCESSION   DAPIWB010000007 DAPIWB010000000
VERSION     DAPIWB010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 36646)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36646)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36646
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.007"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..1306)
                     /locus_tag="RJ266_000286"
     CDS             complement(<1..1306)
                     /locus_tag="RJ266_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HDV7354068.1"
                     /translation="MKLKLNFLPYFSFIPKKLNTNSIIFKIIKVFFIAILLSNSIYLS
                     FFENIFTQTISPFLAIWGLVLLLKSKTSKQYFWIGFFVGILWFWWIGLSSIYFNLNYL
                     VPIIPIIIGFIYGLLFRLCYLLKFDFLRLCGIFCISFIHPLGFDWFNWGIFTVYGFFD
                     PSYRGIICIFLIAYFIYEGYISRYYKIAIVLILFFSGFQYNEKQAQTLNLNYKLINTN
                     ISQDQKFLQENLKSNSDILIQDILQAINEKKELVILPETAFAFDLKNTKYELMLKELS
                     YKITIITGAFHVEKEHTYNSTYIFKKGNVYILNKHFLVPFGEEIPFFKDLTKKYFLKN
                     IEEFSKGPIQSKYKLDNQIITNAICYEATKEQNYQNSQIIIALSNNAWFNNSSEYKLQ
                     QLLMKFYASKYGVSVYHATNGKENIVILPKKLLSKDWKNLSKE"
     gene            1279..1551
                     /gene="yajC"
                     /locus_tag="RJ266_000287"
     CDS             1279..1551
                     /gene="yajC"
                     /locus_tag="RJ266_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDV7354069.1"
                     /translation="MAENSILTSLLPLVVLFAIFYFLVIRPQQKQAKAHKQMLESLQK
                     GDKIITNGGLICEVVKPEEDFIKVKLNEDNVTAKISREFIAKKIDA"
     gene            1544..3124
                     /gene="secD"
                     /locus_tag="RJ266_000288"
     CDS             1544..3124
                     /gene="secD"
                     /locus_tag="RJ266_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HDV7354070.1"
                     /translation="MRNSKINYRLIIFIAVFIFGVAFSLPSFLQSERGAKINLGLDLQ
                     GGLYMLLGVDNEEAVKSKIKSIASSLSYSFNKENILNDGLNTHDDILEFTLLDNADIA
                     KVENLLKEIKGINIQSENMHYKISFTSEEVKNIENFALLQAVETIRNRLDQFGLAEPT
                     VAKQGDDKILVELAGIKTKEDELRAKERITKAAHLQLMEVDDSKMGQASTMSDAEAAS
                     YGLILVPDSRNPNLKYTLKSIPILDGSMLTDARVGLSDKSNYPVINFTLNAEGSKKFA
                     DYTGANVGKRLAIVLDNKVYSAPSINERIGGGSGQISGAFTQEEARDVAVALRSGALL
                     APVKLLEQRSIGPSLGADSIKMSMIALIGASVFIVVFMMMYYGVAGIFANIAMLVNVL
                     VVVAVMAMFGATLTLPGMAGLVLTVGMAVDANVIINERIRELLRDGVNIRVSIEQGYK
                     NAMSAIIDSNITSLVTSVALYAYGTGAVKGFAVTLGIGIVVSMITAILGTHGMFDYFM
                     QRIEKNNNTRFWFGYRRR"
     gene            3124..4095
                     /gene="secF"
                     /locus_tag="RJ266_000289"
     CDS             3124..4095
                     /gene="secF"
                     /locus_tag="RJ266_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HDV7354071.1"
                     /translation="MQFFSEKKIYDFMRMRFAAISLSFILFFGSIYLLWDRGLQYGID
                     FSGGTLVQLKYENAAPITQIREILENQGTFQNLSVTEFGSNEEVTIRFLGSNDNVSND
                     IGEHISTLLKDTGKFEVRRADVVGPKVGDELRNKGLMAIAVSLIAILIYIALRFEWRF
                     ALAAIISEIHDVVITLGAISLFKIDVNLDTLAAVLTVLGYSLNDTIIIFDRIREGIKT
                     SKKTELAPIINESVSATLSRTVLTSGLTLATVVILYFFGGEMIQGFSLALIVGIIAGT
                     LSSIFVASPTLLWFKFSVLEFRNKEIEKAKRKQDKERNRAMYEKGTV"
     gene            4105..6534
                     /locus_tag="RJ266_000290"
     CDS             4105..6534
                     /locus_tag="RJ266_000290"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HDV7354072.1"
                     /translation="MAYEASLIEKKWQKIWDENEYFEPKDDLNLPKKYILSMFPYPSG
                     RIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIKHKIHPKSWTYEN
                     IAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTKEANVNWCEQD
                     QTVLANEQVEDGKCWRCGHEVVQKKMPGYYVKITAYAEELLKDLEELKDKWPNQVLTM
                     QENWIGKSEGLEFSLNLDEESKQKTKESSLEVFTTRADTIYGVSYIALAPEHKIVQNL
                     LSQNLLNQDVLNKIKVIQNQSPRERQSSEKEGYFLGIYTIHPLSGEKIPLWVANFVLA
                     DYGSGAVMAVPAHDERDFEFATKYNLAIKQVIQTQENLPYMQKLGKLINSQEFDNLDC
                     NEARLKIISQFEAKNIGKRVVNFKIRDWGVSRQRYWGAPIPMIKCQSCGIVPQKLENL
                     PITLPEDVQITGEGNPLDKHPTWKNCICPKCGKEAQKESDTLDTFFESSWYFARFASD
                     EKTWQEKALDEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPFDR
                     LLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKELEWNDDAVE
                     GAYRFICKLYDRAQNVKKGELVELKQENLNKEEKYARLKVYEALKKSFEVYHQSFAFN
                     TLIAACMEALNALALCKNEALEQEAFYIILNILEPIIPHVCFELSEELFKCKNFKKLE
                     LKEEVFVKDTLNLAVSINGKKRAEFEISSSASKEEILAFAKENTAKWLEGKSIVKEIY
                     VEGKLVNLVIK"
     gene            6531..7043
                     /locus_tag="RJ266_000291"
     CDS             6531..7043
                     /locus_tag="RJ266_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7354073.1"
                     /translation="MKKILIFCIGLFLGACGYIPTSKIANNIFDEKVYVNVELSQQDP
                     KNSIYVADTLKEMVISKLGRKLALKHEADDVINVKMNNLEFIPLAYDKNGYVISYKAK
                     LNLDFNVVFKDGSSQAFSTSGSYNFEISPNSIISDSARYEAIRAASSEAFDEFISVIA
                     IKGQKRDSKY"
     gene            7027..8424
                     /locus_tag="RJ266_000292"
     CDS             7027..8424
                     /locus_tag="RJ266_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354074.1"
                     /translation="MIPNTNEIAKQTLIALKERKLKPTPENYTEIFEELSLKYGITSS
                     NKAKLDKYKTLLLPIYQQELNSKTIRSLEELISFLISVLNRQSGKQFSEFFDFLYTIS
                     KTLQISKDKKIRDLAKVTSIRISKTMDSESIYLLTKKWKELERNYDENDLEEQARKYG
                     ISKYDDYDSVIKKLLVKLEERSYEHFSELLCLGLNPSLVEDLKIQGFIQNLTQKPFVI
                     GEENFKNELMEFINHRIMVDNMYVQKNLNFFNDNLKKIYELLVLLNKSNEKNMDFINT
                     LKPDENGEVKLSFEDLKLKFKQLGEKITSLNNQIEFTQSLEEREAWSVLKELDKMDEN
                     FNKYKVNYSLALFSIVNYRFIMEKYGMGSLNEIFVRFKKILKDSCSEFDELWMIDEKS
                     YLIVSPGKSKDEITQLVNTNLKTIENFRFIYKQDIITPKIHVAYLDKQSKPSINILDE
                     LIKQIAAVNEQHNES"
     gene            8390..9574
                     /locus_tag="RJ266_000293"
     CDS             8390..9574
                     /locus_tag="RJ266_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HDV7354075.1"
                     /translation="MQRLMNNIMKVENFLAQKSINYDKIDRFLMFRMYEKYKKYFKNI
                     PIIQLIGTNGKGSTGRYLTQLLENLNYKIGHYTSPHIFSFNERFYLDGKIANDEELEQ
                     AHIRLEEIFKQDLQKLSYFEYATFLAMILFQKCDFIVLEAGVGGEYDATSIFERRMSI
                     FTRIGFDHIQILGNSLEDIARTKLKVMAPIALISDEQEQNVLNLAKKIAFLKKANLQV
                     SSLNPFLKEKFEIYCKKFVLPYFLKHNLKLALKACEILTSQEKTLEALKKLQELNLQG
                     RCQEISPNFFVDVGHNPMAAKAMLDKFQGEKINLIYNAYLDKDIFQILNTLKPIIDTI
                     QIYKYKSAERKLADDEIYSIASKLGMQCKEFVKLEENKKNLVFGSFMLVENFLKEWCG
                     KK"
     gene            9561..10463
                     /locus_tag="RJ266_000294"
     CDS             9561..10463
                     /locus_tag="RJ266_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDV7354076.1"
                     /translation="MVKNKFTITITDINGSRHFYLNQIIKKIVFYIIAFIVLFLVFSG
                     FYIKYLDSKLSDISEKREELLKKSKELELSNSQMQKSIEEKTQQYAAIEDKIASFEEA
                     LGLEAENNLTISARLDNLQLTNEQQLGILGQIPNGWPIENKGITGNFGWREHPLLKRR
                     EFHPGIDLRAEIGTPIYAPASGVVEFSGYSDNGYGYNVILLHNFGFKTVFAHMMRKEV
                     VKAGQFVNKGQLIGYSGNTGLSTGPHLHYEVRFINKTLEPLYFLNLQRKNMNDFFNQE
                     RRVPWQSLIKAVSAQHPALAQKQQ"
     gene            10400..10795
                     /locus_tag="RJ266_000295"
     CDS             10400..10795
                     /locus_tag="RJ266_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HDV7354077.1"
                     /translation="MAIFNKGGISPTSSSSSETTVISSGARIEGKFYFASMLHVDGEL
                     SGIIHSESIVVIGKNGNLKGELQADKIVVNGCFEGQLEANSLEILAGGVVNGDISTQK
                     ISIENGGRFNGTSKIKEDTIKLIENNNEE"
     gene            10795..13731
                     /locus_tag="RJ266_000296"
     CDS             10795..13731
                     /locus_tag="RJ266_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDV7354078.1"
                     /translation="MQASFYEYLQNPKICELFLCKDEKQADLLAQVSRFKGLKTFVLP
                     DFRAQFGDDLRAFSKELFDLCKILNAYHKEEEKKILISPLNTVLKKLPSKKHLQNYHI
                     DKKQNFDLKCFEDEISRLGYEFVDIVQDKGEISIRADIIDIFCINEENPIRILLFGEE
                     IESIRYFDLQSQKSIPNELEHFEICPFLKYFDKENYEIFKDKLEDFQSDALIYDINSL
                     GFWCIDDFFDYLELDFLACEKFDINEYEKDISFVNAKILPQAKKFKELQSSYNKDFFE
                     FHKNKKITLLAKNEALFKALELEDTQNIHFVKSDLRLNLISPEELIISLNQKEKQKTR
                     KKASLIIDELKNGDYIVHEDYGVGKFLGLEMIVISGAKKEFVAIEYQNSDKLLLPVEN
                     LYLIDKYLGVSGSIPSLDKLGKTSFIKLKEKLKTKLLAIASEIVIMAAKRSLVQAKKI
                     TVDLNRQTDFIASAGFIYTSDQDKACHEILQDFQSGKVMDRLLSGDVGFGKTEVAMNA
                     IYPVVKSGFCAFLFAPTTLLSHQHYKTLKKRFDPFDIKVFKLDRFTSSAEKKQVLQNL
                     KENKACVVVGTHALLSVECENLALVIIDEEHKFGVKQKEKLKEITQNSHILSMSATPI
                     PRSLNQALSSIKSYSVLQTPPEDRMDVRTFVKENDDALLKEAIARELRRGGQIFYIHN
                     HIASIEQCKKHLLELFSTLRILILHSKIDAKMQEEEMLKFENKEYDLLLSTSIVESGI
                     DLPNANTIIVEKSDRFGMADLHQLRGRVGRSDKQGYCYFLIEDKNAITKDALKRLVSL
                     ESNSFLGAGSILAYHDLEIRGGGNLLGVDQSGHIEQIGYSLYLKMLEDELNALSKNEV
                     DQKENKLDLKLNVNAFLNSELISEDRLRLELYRRLSKCEQVHEVYEIESEIEDRFGKL
                     DIYTKQFLSLITIKILALNKFKSISNYEQNIQFTALNDEKELIKAKSKDDDDILEAIL
                     THLRKA"
     gene            13733..14494
                     /locus_tag="RJ266_000297"
     CDS             13733..14494
                     /locus_tag="RJ266_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7354079.1"
                     /translation="MDWNKTYAAIYRARKDYLKPIFEIDPIALKDLVGMESQKKALYE
                     NTLNFIQDKGANHALLWGSKGTGKSSLIKAIFNEFKEQGLRLVELNKEDLFALADIID
                     EIRLENFKFILFCDDFSFEKGDDSYKFLKPLLEGSIEKAPNNVIIYASSNRRHLLSES
                     ITDNLDTQITHTELHLSDAAEERLSLSDRFGLWLSFYQGNLEEYLKMIDFYFKDYSCD
                     KELLHAKAKEFATLRASRSGRTAKQFYLAFKENFK"
     gene            14491..15177
                     /locus_tag="RJ266_000298"
     CDS             14491..15177
                     /locus_tag="RJ266_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III domain-containing protein"
                     /protein_id="HDV7354080.1"
                     /translation="MTGAQIFTKLLNLDLNYHDFDWLENQGLSEFELLISVVLTQNTN
                     WKNVLKALENLKKENIASLEQINTLSNLELATLIKPSGFYNTKAKRLKGLVESIINTY
                     ENLENFKTNVSRKWLLNIKGLGFESVDGILNYLCKREILVVDSYSLRLAFHLGYEFEN
                     YEELREFFQSGIESEQENLCKILGRKCELYELYQIFHALIVAFAKQSFKGQKLSPKGE
                     EWIKILKEDL"
     gene            15174..15986
                     /gene="thiD"
                     /locus_tag="RJ266_000299"
     CDS             15174..15986
                     /gene="thiD"
                     /locus_tag="RJ266_000299"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HDV7354081.1"
                     /translation="MKAKGSELIPVLTIAGSDCSGGAGIQADLKTFSAHNLFGMSVVL
                     SVVAENTARVISVHDIPTQSVDEQMLAVFEDIVPKATKIGMIGSCELMSCVAKNLSEF
                     KPQNIVIDPVMFAKNGYALMPQENCDFFKQTIVKFADILTPNIPEAEFLCGFKIANEE
                     QMIKAAKHLCSLGAKAVLLKGGHSEINANDVFYDGKEIYILKGERIETKNTHGTGCTL
                     SSAIASNLAKGKDLFHAVSEAKEYVRNAIYYSLNLGKGCGPTNHFFKFLDEK"
     gene            15976..16608
                     /gene="thiE"
                     /locus_tag="RJ266_000300"
     CDS             15976..16608
                     /gene="thiE"
                     /locus_tag="RJ266_000300"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDV7354082.1"
                     /translation="MKNKLDLSLYLVATKGSKSEECFLNTLENAIKGGVSIIQLREKE
                     LNAREFYKLGLKVQKLCKSYKIPFLINDRVDIALALDADGVHLGQEDLEAKLARKLLG
                     DEKIIGLSLKKLEQLEFIQGVNYLGCGAIKATPTKESSLLSLELLSQICDKSPIGVVA
                     IGGIDKEALVELKGINLSGVAVVRAIMDAKDAFLAAKELKRKIYENLSLK"
     gene            16586..17215
                     /locus_tag="RJ266_000301"
     CDS             16586..17215
                     /locus_tag="RJ266_000301"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HDV7354083.1"
                     /translation="MKIYLLNETPFEGVENLILNEIVFYDFSVDLSLYDALICTSKNA
                     LKALQHAKITLNFKLNLYAVGQSTAQYAKNLGFKKIKIPSKAYGKDLFLEFKEELKMQ
                     KCLYLRAKNIVSTLNLDLKNVGVDLDEMIVYENVFKKGDKKLIHPAIFIFTSPLSVEN
                     FLKFYSLKEEDKVVVIGQSTAKKLLNFKNLYICENQSLLNCVKLAKTLV"
     gene            complement(17212..17664)
                     /locus_tag="RJ266_000302"
     CDS             complement(17212..17664)
                     /locus_tag="RJ266_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354084.1"
                     /translation="MKKAYVLIWTIFLILLISLWMSLTLNISSYTPKIIQDSYYYLQA
                     QILSHNATQFSKYFLYQAKQENKECLDNIYFNYTKALIKIKYFYPIAQCVNFKFSNFN
                     PDANLSKDGVIIAHISIALNRDKNVNDEILLTKSIIIYPKENFWNLKN"
     gene            complement(17661..18323)
                     /locus_tag="RJ266_000303"
     CDS             complement(17661..18323)
                     /locus_tag="RJ266_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354085.1"
                     /translation="MSKAFTLFELIISLILFTFITSLLSKPLMDFYHLNFTALHTNNL
                     ITQAHLNLLKIEKLIQNCINITFSQNTLKCLLKDELISLKDNKLYLINSALILENNHT
                     LYSPHSDFKTQLQNRKDLYNDNEHISYAYKINKIEKISILENGISANFTGSFIPLQAQ
                     LVIKLQNEELIYEIKPKFNEQLNQQGLISKNISSFNLQNNKLKICLKRQTKHCLEKRI
                     LL"
     gene            complement(18320..18622)
                     /locus_tag="RJ266_000304"
     CDS             complement(18320..18622)
                     /locus_tag="RJ266_000304"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HDV7354086.1"
                     /translation="MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERL
                     YKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDGIFQFQKLYFQDQNYSVYFKE"
     gene            complement(18619..19350)
                     /locus_tag="RJ266_000305"
     CDS             complement(18619..19350)
                     /locus_tag="RJ266_000305"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HDV7354087.1"
                     /translation="MLYILANGAMATALAYGLKDDYEICIVGRSIEKLQALTKEGFKT
                     LLYKDFNIEGKDVILAFKPYALENIAQMLKGQARILISVLANVDFEKLQTIKAQNYVR
                     IIPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
                     FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSSALLEHEHPAIIKENICSPGGVTI
                     KGIKILEQKGIRGSFFEAINASSAK"
     gene            complement(19350..19739)
                     /gene="fliW"
                     /locus_tag="RJ266_000306"
     CDS             complement(19350..19739)
                     /gene="fliW"
                     /locus_tag="RJ266_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliW"
                     /protein_id="HDV7354088.1"
                     /translation="MTLAVKCPILGFEETKNMEFSTIDEVFVRLKSLDGKDFSFVLIN
                     PYLIRPDYEFDIPTYYQELLSLTPESNMKIFNIVAIAKSIEESTVNFLAPVVINLDNN
                     TMVQVILDTVNYPDFFQADQIANYIKK"
     gene            19900..20547
                     /locus_tag="RJ266_000307"
     CDS             19900..20547
                     /locus_tag="RJ266_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HDV7354089.1"
                     /translation="MKKGIFLLVFLSVFFSACSTKNDEGLYNLSASEWYKQIIKDLQD
                     KDLEKADDHYNGMASEHVADPLLETTLIILAQAHMDEEEYKLAEFYLDEYNKKFGNSR
                     NADYIRYLKIKAKFDAFAVPNRNQALMLESQKEIDTFLKDYPYTEYEPLVQTMLTKFN
                     LAVFYLNSTIENLYQRIGHDESAQIYKQRLQESEFYQQSIIKPELPWYRSIFERF"
     gene            20564..22939
                     /gene="lon"
                     /locus_tag="RJ266_000308"
     CDS             20564..22939
                     /gene="lon"
                     /locus_tag="RJ266_000308"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HDV7354090.1"
                     /translation="MQIEEIQNYPANLPVLVEDELFLYPFMITPIFINDSSNMKALDL
                     AIKNDSMLFVAPSKLENGRNFDEIYNCGVIGTIMRKVPLPDGRVKILFQGYAKGKIIE
                     QISNKPLEAKIELIKEDFLEGTKKEALLEVLKEKVKNLANISHYFSPDLLRTIEEGFD
                     ASRICDLILNTVRIKKQVAYEFFVLTDLEQKLVKLIDLIAQEIEANKIQKEIKNKVHS
                     RIDKVNKEYFLKEQLRQIQKELGSDTQKEDEVREYQKRLELKKKFMHEDAYKEIKKQI
                     EKFERIHQDNSEASMIQTYIETALDIPFEKISKKKLDIKEVSKQLNHDHYALNKPKER
                     IEEYFAVRELLEKRKIAEKDGAKVILCLYGPPGVGKTSLANSVSKALKRELIRIALGG
                     LEDVNELRGHRRTYIGAMPGRITQGLIEAKQINPVIVLDEIDKLNRSFRGDPSAVLLE
                     ILDPEQNSKFRDYYLNFNIDLSKVIFIATANDISNIPAPLRDRMEFIELSSYTPSEKF
                     HIMKKYLIPDELKKHGLKSNELSIDDETIELIISDYTRESGVRNLRRKVAELCRKSAK
                     KLLLENIKKVIINTKNLNEFLDKKVFEIEKNNGENQVGQVNGLAWTSVGGDVLKVEAV
                     KIKGKGELTLTGSLGDVMKESARIAFSMIKVLIDEGKIKIPKKIIIDPKVNVYDSYNI
                     HIHVPDGATPKDGPSAGITISTAIASIFSDKKVKADVAMTGEIDLKGKVLPIGGLKEK
                     LIAAYKADIKTALIPRKNYERDLKDIPSEVRDNMEIIAVDTFSDVLEYTLV"
     gene            complement(23000..23260)
                     /gene="rpsR"
                     /locus_tag="RJ266_000309"
     CDS             complement(23000..23260)
                     /gene="rpsR"
                     /locus_tag="RJ266_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HDV7354091.1"
                     /translation="MAEKRKYSRKYCKYTEAKVEFIDYKDTAMLKHALSERFKIMPRR
                     LTGTSKKYQEMVEVAIKRARHVALIPYIVDRKEVINNPFEGL"
     gene            complement(23271..23822)
                     /locus_tag="RJ266_000310"
     CDS             complement(23271..23822)
                     /locus_tag="RJ266_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDV7354092.1"
                     /translation="MFNKVVLVGNLTRDIEMRYAQSGSAIGASAIAVTRRFTANGEKR
                     EETCFIDISFYGRTAEVANQYLTKGSKVLIEGRLRFEQWSDQNGQNRSKHSIQVENME
                     MLGNSNAPQQGGNFGNNSFSNNNYSGNYENQSYDPYMSENQNFNKAKANPAPQRNQSP
                     QHEEKLKEIDIDAYDSDDTNLPF"
     gene            complement(23831..24208)
                     /locus_tag="RJ266_000311"
     CDS             complement(23831..24208)
                     /locus_tag="RJ266_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HDV7354093.1"
                     /translation="MKHYEVLFILKPTLTEEEVNTKLEFVKEVLTKNSAEIETVVPMG
                     TRKLAYKIKKYERGTYFVIYFKAPTNLIAELERVLRITEEVIRFLIVKYENKKEIAAW
                     EKLSHGIKQSKKEIKPLDAPEIQ"
     gene            complement(24295..25161)
                     /locus_tag="RJ266_000312"
     CDS             complement(24295..25161)
                     /locus_tag="RJ266_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK family antimicrobial peptide resistance
                     protein"
                     /protein_id="HDV7354094.1"
                     /translation="MNKKFSYPIPNFTDRRKSIIFWRYLRFQARKILYFPQVRLLEKT
                     LNKEKNKHLKDFFSQRPYACYNATRRFCDKSFKANERVKTLIYDVDKGLACFKFLPEE
                     QIIFSFDEDFELFLGYNYNVCEEGFWAFSLKFKKYTILQCNFCFTLENNLLLSCIQGH
                     KYKDFNILEINKILTKKCHGLRPVALLIECSKMLCEILKLQATLGVHEKNQIRSQKGK
                     EKGYFVDYQKIWLENGGELIKINKHKYYKLHHSQKNLEEIPSQKRSMYKKRFAMLEEI
                     KTNLDKTLSIQD"
     gene            complement(25154..26260)
                     /gene="rseP"
                     /locus_tag="RJ266_000313"
     CDS             complement(25154..26260)
                     /gene="rseP"
                     /locus_tag="RJ266_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HDV7354095.1"
                     /translation="MRSLLFLIVILILGIKFYSIEFLATVLVISFLIFFHELGHFLAA
                     RSLGVKVEVFSIGFGKSLIEREFKGTNYRLSTLPLGGYVKLKGQDDMRPGFENLDKDS
                     YSILSPLKKIYILFAGPFFNLILAFFLYIIIGNLGLNKLAPQIGNIASNSAAQEIGLQ
                     KNDTILEINGIRIQTFDEISKHLSLDPLKILINREGKNLEFILTPKIGQGYNDFGQIV
                     EKPQLGVSPNGTSTLVKHQGLESFKYAAQESFQASTLIIKGIVKLISGEVEAKNLGGI
                     ITMTEITSKAAQNSFTLLLFITALISINLGILNLLPIPMLDGGHILFNLYEMIFRRKV
                     PQRTFEYLSYTGMAILLSLMLFATYNDISRIIGE"
     gene            complement(26257..26793)
                     /gene="pgsA"
                     /locus_tag="RJ266_000314"
     CDS             complement(26257..26793)
                     /gene="pgsA"
                     /locus_tag="RJ266_000314"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HDV7354096.1"
                     /translation="MNLPNILAIFRMVLAPLLFFLLIYHFENIHQSWINYFAALTFSL
                     AALSDFFDGYIARTWKQTTKLGGILDPLADKMLVLAAFLGLLLTGKANEWVIYIILVR
                     EFFITGFRVVMISENLNVNASFAGKLKTAFQMTAIGFLIMEWIGGEILLYIALILTLY
                     SGFEYIYTYIKAQKKGEK"
     gene            complement(26918..27523)
                     /locus_tag="RJ266_000315"
     CDS             complement(26918..27523)
                     /locus_tag="RJ266_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDV7354097.1"
                     /translation="MKKELEIFSTRYSCRNFKNEKLKKEHLNSILEIARLSPSSLGLE
                     PWKFIVVQDEKRKEELSKICNQQKHVKDCAALIIIISRLDFLDYFEEKLRKRDMSETE
                     MQKRLDTYMPFLKSLNQEQKISYAREQAHIALASILYSANALNIASCTIGGFDKEKLD
                     SYLSLDIQKERSSLVVALGYCNDKKNPQKNRFSFDEVVKFI"
     gene            complement(27523..28143)
                     /locus_tag="RJ266_000316"
     CDS             complement(27523..28143)
                     /locus_tag="RJ266_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDV7354098.1"
                     /translation="MNFKELISKRRACKLFNDKKINEKDLHFILESGVLAPSSHGFEP
                     WKFVVLEQKEHNLKLSTLCYNQQNVASASHNIIFLARKDLQSKDEFAQKQVRRFSGSS
                     EENFQKILEIYTHKTNAMNDNELYHYAQLQCYLAMMQMSLAAMSLGIDSCMIGGFEKA
                     KVDNFLNLTYPFETAVILSLGYKAHEPKYSTQRLNFNEVVEFYKEK"
     gene            complement(28207..28632)
                     /locus_tag="RJ266_000317"
     CDS             complement(28207..28632)
                     /locus_tag="RJ266_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV7354099.1"
                     /translation="MKEIKLKEDLEKIYPLIKQLRNNLSLKDFLDKIQLATQTQHYKL
                     FAYENEGSYKAACGVMPFNVLYHNHCLYICDFVVDEALRGKGIGQAFLKKIQIWAKDQ
                     GYEELELSSSFFRTQAHEFYIQKMGFEKSGFVFKKNIKL"
     gene            complement(28644..29732)
                     /locus_tag="RJ266_000318"
     CDS             complement(28644..29732)
                     /locus_tag="RJ266_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HDV7354100.1"
                     /translation="MKHLLYLIGDELTINEKFKNYIYRTYEEKFKEINEIRIQSKTDK
                     DLPFLLENLLNQYDFITLFTSPLHYATVAKILATLNDDNLILKDDTLVPDKAEFSKNS
                     FVCNFSNSKINVVKINPSEKLPNLLGHIKLNFAYFCIFGMDDESAILLLQTLTKSYEI
                     NIKLTKLLDNLVLIKATCANFGKLDGFLNSVKNLFGQKVFLGKDPIHFISSKLLEKKL
                     KISFAESCTGGLCASTLTKISGVSEIFEGSIVSYSNRIKHEWLGISESILENNGEYSE
                     RCVYFMLKGIFKTANPDFALAISGVVGEKDEGKIKSGTIYIGAMFRDGTFIQETLYLD
                     GDREFMQEQAVLATFCLLLKLKPEIFEI"
     gene            29831..32584
                     /gene="ileS"
                     /locus_tag="RJ266_000319"
     CDS             29831..32584
                     /gene="ileS"
                     /locus_tag="RJ266_000319"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HDV7354101.1"
                     /translation="MDYKETLLLPSTTFAMRANLAELEPQRFKKWFEQNYAYETMKEN
                     RKNAKKSFTLHDGPPYANGHIHIGHALNKILKETIIKTHYFKGESVRFTPGWDCHGLP
                     IEQQVEVKLGEKKKSLSKKEIREFCRQHASEFVDIQREEFKNLGIIADWDKPYLTMKF
                     EFEAAIYRTLCEIAKKGLLCERSKPVFWSWAAKSALAEAEVEYQDKEDYSIFVAFDLD
                     VKACEKLGVSKASAVIWTTTPWTLVANQAIALNPNENYVITKEGLIFASALLKSMVEK
                     GLTSGEIQKELNAKEFEKLEAINPLNGRKSVLIMGEHVLMDGGSGLVHTAPGHGEDDY
                     YACLKYGIEVLMPVDDGGCYDETLRAKELLPSHLLEEFIGLHIFKANEKILELLGAKL
                     LHSSKFIHSYPFCWRTHKPVIYRATKQWFILMDEPKLQGKTLRECAKEQLLKTTFYPQ
                     SGVKRIGSMVENRPDWCISRQRDWGTPIAFFRDKNTKEVIFDDELFDFVAAIFEKHGA
                     DAWWEFEIKDLIPTNSKYNAENLEKVYDILDVWFDSGSTFNAVLNSGLYDAGEKRASM
                     YLEGSDQHRGWFQSSLLVGTAINESAPYESILTHGFTTDEKGQKMSKSKGNVIAPEYV
                     AKTYGVEILRLWILLSDYSSDLKISDNILKQVGEQYRKIRNTIRFLLANTNDLKDLKV
                     KEFSFIDKWILSRATKVFKASKEAFFAYEFAKGFSLLLNFLSADLSGIYLDISKDRLY
                     CDSENAQRRKSAQVAMALIAKELLNLLAPNLSYSVDEALEHANVLIKGDAKDVFDLSL
                     TQDFDYDFGIDDTFLMSAREKFFEQIDILKKDKIIKSTLELNLNISFNKFPNEELADW
                     FMVSQISNENEEILAEFEVENEKFKITKASLCKCPRCWKLQSKDEETPCLRCEEVLKG
                     IQC"
     gene            32578..32688
                     /locus_tag="RJ266_000320"
     CDS             32578..32688
                     /locus_tag="RJ266_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354102.1"
                     /translation="MLENPIPNSIIITTIAVVLAFSALAVFLIKKTKENK"
     gene            32685..34046
                     /gene="gatA"
                     /locus_tag="RJ266_000321"
     CDS             32685..34046
                     /gene="gatA"
                     /locus_tag="RJ266_000321"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HDV7354103.1"
                     /translation="MITLKEALKYSKEELENLKKELNEKAKKEKKIGAYIEQFLDKDL
                     SVSGEGVPVAIKDNISVKGWELTSASKILQGYIAPYDASVIVNLKANGFSPFGRCNMD
                     EFAMGSSTASSYYGKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPA
                     AFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSA
                     NIEFIKTAPNLNANKKLKIAVIENYVNDADSEVKNALLKTIDMLKANGHEIVYKNLLD
                     SKFDIAAYYIIATAEASANLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFGEEVKRRI
                     LLGTFVLSSGYYDAYYIKAQKARAFIKAKYEEILQDCDLIFMPVTPTTAFKFDTQKSP
                     MQTYLEDVYTISVNLAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLLDGALSLEQM
                     IKH"
     gene            34056..35513
                     /gene="guaB"
                     /locus_tag="RJ266_000322"
     CDS             34056..35513
                     /gene="guaB"
                     /locus_tag="RJ266_000322"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HDV7354104.1"
                     /translation="MKIVKRALTFEDVLLRPGYSEVLPKEVKIHTKLTKNITLNMPLI
                     SAAMDTVTEHRAAIMMARLGGLGVIHKNMDIASQVREVKRVKKSESGVIIDPIFVSPK
                     ASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDLRFESDFSNLVENVMTKMPLITA
                     PKGCTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKKRKEYPDANKDNFGRLRV
                     GAAIGVGQMDRVNALVEAGVDVVVLDSAHGHSKGIIDTVKAIKAKYPNLDLIAGNIAT
                     AAAAKALCEAGVDAVKVGIGPGSICTTRIVSGVGVPQISAIDECVEEANKFGVPVIAD
                     GGIKYSGDIAKALAVGASSVMIGSLLAGTDESPGELFTYQGRQYKSYRGMGSLGAMQK
                     GSSDRYFQQGTAQDKLVPEGIEGRVPYVGSIRSVVHQLLGGLRSSMGYVGAKDIEDFQ
                     KRAEFVEITTAGLKESHVHDVTITHEAPNYKVNHQ"
     gene            35510..35683
                     /gene="xseB"
                     /locus_tag="RJ266_000323"
     CDS             35510..35683
                     /gene="xseB"
                     /locus_tag="RJ266_000323"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HDV7354105.1"
                     /translation="MSFEENLKHANESLEKLNNQELALDESVKIYKEGLESIKKARLE
                     LEKAKLEVEQIDE"
     gene            35676..36452
                     /locus_tag="RJ266_000324"
     CDS             35676..36452
                     /locus_tag="RJ266_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HDV7354106.1"
                     /translation="MSKIAALQFPTLALSESRLDYYLKASKDNGVNLVVLGEYVINSF
                     FTELLHMPKNMIKEQSEAKKESLIKLAKKYELEIIAPYVSVEAKSYKKLCLKVTPNGV
                     KSYEQQILMPYEHWNEEKFFSNKTPSELKIFTFNYEKLKCALLFGFETHFDIFWQQIM
                     AKKIDLVIVPSACTFESKQRWEELLKTRAFLNSTSILRVNRIGKTKDEWNFYGDTLFI
                     NAFGEIESKLGSEEEMLIIEPKKSDEARKLWGFDKILKNF"
     gene            36464..>36646
                     /locus_tag="RJ266_000325"
     CDS             36464..>36646
                     /locus_tag="RJ266_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354107.1"
                     /translation="MRKILLQIFIFSVLFIVTFTINRILMQNSFIPTGLISDKNEIFL
                     MYLLGVFHDIRFLSAAF"
BASE COUNT        13120 a         4583 c         6470 g        12473 t
ORIGIN      
        1 tttctttgga taaatttttc caatctttgc ttaaaagctt tttagggagt ataactatat
       61 tctctttgcc atttgtagca tgataaacac taaccccata tttacttgca taaaatttca
      121 ttaagagttg ctggagtttg tattcgctac tattattaaa ccaagcattg ttgcttaggg
      181 ctataataat ttgtgaattt tgatagtttt gttctttggt agcttcataa caaattgcat
      241 ttgtgataat ttgattatct aatttatatt tgctttgtat aggacctttg gaaaattctt
      301 caatattttt gagaaaatat ttttttgtta agtctttaaa aaatggaatt tcttcaccaa
      361 agggaactaa aaaatgctta tttaaaatat agacattgcc ttttttaaag atataagtgc
      421 tattgtaagt atgctctttt tcaacatgaa atgctcctgt aataatggtg attttataag
      481 ataattcttt aagcataagc tcatatttgg tattttttaa atcaaaagca aaagcggttt
      541 caggcaagat tacaagttct tttttttcat ttatagcttg aagtatatct tgaattaaga
      601 tatcagaatt tgattttaaa ttttcttgta aaaatttttg atcttgagag atattagtat
      661 tgatgagttt gtagtttaaa ttaagagttt gagcttgttt ttcattatat tgaaatccac
      721 taaagaataa aataagaaca attgctattt tataatatct tgatatataa ccctcataga
      781 tgaaatatgc tattaaaaat atgcaaataa tgccacgata acttgggtca aaaaaaccat
      841 aaactgtaaa aatcccccaa ttaaaccaat caaatcctaa aggatggata aaacttatgc
      901 aaaaaattcc acaaagcctt aaaaaatcaa attttaataa ataacataat ctaaaaagta
      961 acccataaat aaaaccaatg ataattggta taattggtac taaatagttt agattaaaat
     1021 aaattgaaga taaaccaatc caccaaaacc aaagaatccc tacaaaaaaa cctatccaaa
     1081 aatattgttt agaagtttta ctttttagaa gtaaaactaa cccccaaata gctaaaaatg
     1141 gactaatggt ttgtgtaaaa atattttcaa aaaatgatag ataaatagaa tttgaaagta
     1201 aaattgcaat aaaaaagact tttattattt taaaaatgat agaattagtg tttaattttt
     1261 ttggaataaa ggaaaaatat ggcagaaaat tcaattttaa cttcattgtt acctcttgta
     1321 gtgttatttg caatttttta tttcttggtg atcagaccgc aacaaaaaca agcaaaagca
     1381 cataaacaaa tgcttgagtc tttgcaaaaa ggagataaaa tcatcactaa tggcggactt
     1441 atttgtgaag tcgtaaaacc agaggaggat tttatcaaag ttaagcttaa tgaagacaat
     1501 gttactgcaa aaatttcaag agaatttata gcaaagaaaa ttgatgcgta attctaaaat
     1561 caattatcgc ttgattattt ttatagcggt atttattttt ggagtggctt tttcactccc
     1621 ttcttttttg cagtcagaac gtggtgcgaa gattaattta gggcttgatt tgcaaggtgg
     1681 gctttatatg ctcttaggtg tagataatga agaagctgta aaatctaaaa taaaatcaat
     1741 tgcatcttca ttgagttatt cttttaataa agaaaatatt ttaaatgatg gcttaaatac
     1801 ccatgatgat attttagaat ttactttgct tgataatgca gatattgcaa aagttgaaaa
     1861 tttgcttaaa gaaataaaag gaattaatat acaaagtgaa aatatgcact ataaaatttc
     1921 ttttacctca gaagaagtaa aaaatataga aaattttgca cttttgcaag cagttgaaac
     1981 cataagaaat aggcttgatc aatttggttt agcagagcca acagttgcta aacaaggtga
     2041 tgataagatt ttggttgaac ttgcagggat taaaaccaaa gaagatgaac taagagcaaa
     2101 agaacgcatc acaaaagcag cacatttgca acttatggaa gttgatgatt ctaaaatggg
     2161 tcaagcttct acaatgagcg atgctgaggc tgcgagttat ggactgattt tagtgcctga
     2221 ttctagaaat ccaaatttaa aatatacctt aaaaagtata cctattttag atggatctat
     2281 gcttactgat gctagagtag gacttagcga taagagtaat tatcctgtga ttaattttac
     2341 tttaaatgcc gagggttcta aaaaatttgc tgattataca ggagcaaatg ttggaaagcg
     2401 tcttgctatt gtacttgata ataaagtata ttctgctcca tctatcaatg aacgcatagg
     2461 cggaggtagt gggcaaatca gtggagcttt tactcaagaa gaagcacgcg atgtggcggt
     2521 agctttaaga agtggagctt tgcttgcgcc tgtaaaatta cttgaacaaa gaagcatagg
     2581 accatcttta ggtgctgata gtattaaaat gagtatgata gccttaatcg gtgcatcagt
     2641 ttttattgta gtatttatga tgatgtatta cggtgtggca ggaatttttg caaatattgc
     2701 aatgctagtt aatgttttgg tagtagttgc cgttatggct atgtttggag caactttaac
     2761 tttaccaggg atggcaggac ttgttttaac tgtgggtatg gcagtagatg caaatgtgat
     2821 tatcaatgag cgtatacgag aactcttgcg agatggagta aatataagag ttagtataga
     2881 acaaggttat aaaaatgcta tgagtgcgat tatagattca aatatcactt ctttagttac
     2941 ttcggtagcg ctttatgcct atggaacagg agcagttaaa ggttttgctg tgactttggg
     3001 aattggtatc gttgtttcta tgattacagc tattttagga actcatggaa tgtttgatta
     3061 ttttatgcaa cgcatagaaa aaaataataa tacaagattt tggtttggtt ataggagaag
     3121 ataatgcagt tttttagcga aaagaaaatt tatgatttta tgagaatgcg ttttgctgct
     3181 atttcccttt cttttatttt gttttttggt tctatttatt tactttggga taggggtttg
     3241 caatatggca ttgattttag cggaggaact ttagttcagc ttaaatatga aaatgcagct
     3301 cctataacgc aaattcgaga aattttagaa aatcaaggaa cttttcaaaa tttatctgta
     3361 actgagtttg gaagcaatga agaagtaact atacgctttt taggaagtaa tgataatgta
     3421 agcaatgata taggtgagca tataagcact cttttaaagg atacgggaaa atttgaagtg
     3481 cgtcgtgctg atgtggtagg tccaaaagta ggtgatgaac ttagaaataa aggacttatg
     3541 gctatagctg tatctttgat agcaatttta atttatatag cgttgcgttt tgagtggcgt
     3601 tttgctcttg cggctataat cagtgaaatt catgatgttg tgattacttt aggagcaatt
     3661 tctttattta aaattgatgt caatctagat actttggctg ctgttttaac tgtgcttgga
     3721 tactctttga atgatacaat tattattttt gatagaatca gagaaggtat taaaacaagt
     3781 aaaaaaaccg aacttgcacc tattattaat gaaagtgttt cagcaacttt atcaagaacg
     3841 gttttaactt cagggttgac tttagcaacc gttgtgatac tttatttctt tggcggggaa
     3901 atgatacaag gattttcttt ggctttaatt gtaggtatta tagcgggaac tttaagctct
     3961 atttttgttg caagtccgac attattatgg tttaaattta gtgtgcttga gtttagaaat
     4021 aaagaaattg aaaaagcaaa aagaaaacaa gataaagaac gcaatcgtgc aatgtatgaa
     4081 aaaggaactg tgtaaggaga atttatggct tatgaagcaa gtttaataga aaaaaaatgg
     4141 caaaaaattt gggatgaaaa tgaatatttt gagccaaaag atgacttaaa tttgcctaaa
     4201 aaatatattt tatcgatgtt tccttatcct agcggacgca ttcacatggg gcatgtaaga
     4261 aattatacta taggtgatgc tttagcaaga tattatcgca agataggttt taatgtttta
     4321 catcctatag gttttgatag ttttggcatg cctgctgaaa atgcagctat taaacataaa
     4381 attcatccta agtcatggac ttatgaaaat atagcttata tgaaaaaaga acttttttct
     4441 ttaggttttt ctttttctaa aaaaagaatg cttgctactt cagatccact ttatacaaaa
     4501 tttgagcaag aattttttat taagatgttt gaaaaaggtt tgatttacac taaagaagca
     4561 aatgtaaatt ggtgtgaaca agatcaaacg gttttggcta atgagcaagt tgaagacgga
     4621 aaatgttggc gttgtggtca tgaagtggtg cagaaaaaaa tgccaggtta ttatgtaaaa
     4681 atcactgctt atgctgagga acttttaaaa gatttagaag aattaaaaga taaatggcct
     4741 aatcaagttt taactatgca agaaaattgg attggtaaaa gcgaaggttt ggaattttct
     4801 ttaaatttag acgaagaaag taagcaaaaa accaaagaaa gttctttaga agtttttact
     4861 acaagagcag atacaattta tggagtttcg tatatcgctt tagctccaga acataagatt
     4921 gttcaaaatt tgctttcaca aaatttatta aatcaagatg tattaaataa aatcaaagtt
     4981 attcaaaatc aaagcccaag agaaagacaa agttctgaaa aagaaggtta ttttttagga
     5041 atttatacca ttcatccttt aagcggagaa aaaattcctt tatgggtggc taattttgtc
     5101 ttggctgatt atggtagtgg agcggttatg gctgttccag ctcatgatga aagagatttt
     5161 gaatttgcaa caaaatataa tcttgccatc aaacaagtta ttcaaactca agaaaattta
     5221 ccttatatgc aaaaattagg aaaattaatt aatagtcaag aatttgataa tcttgattgt
     5281 aatgaagcaa gattaaaaat catttctcag tttgaagcta aaaatatagg aaaaagggtt
     5341 gtaaatttta aaattcgtga ttggggtgtt tcgcgtcaaa gatattgggg tgcgcctatt
     5401 cctatgatta aatgtcaaag ttgtggtata gtacctcaaa aactagaaaa tttacctatt
     5461 actctgcccg aagatgtgca aattacaggt gagggtaatc cacttgataa acatccaact
     5521 tggaaaaatt gtatctgtcc aaaatgtggt aaagaggctc aaaaagaaag cgatacttta
     5581 gatacttttt ttgaaagttc ttggtatttt gcacgttttg caagtgatga gaaaacttgg
     5641 caggaaaaag ctttagatga aaaaagtgta aagtattgga tgagtgtgga tcaatatata
     5701 ggtggtattg aacatgcaat cttgcattta ctttatgcga gatttttcca aaaagcttta
     5761 agagatttgg gttatttaac acaaaatgaa ccttttgata gacttttaac tcagggtatg
     5821 gtgttaaaag atggtgctaa aatgtcaaaa tcaaaaggca atgttgtaga tcctgatgag
     5881 attatagaaa aatacggtgc tgataccgca agacttttta tactttttgc tgcgcctccg
     5941 gctaaagagc ttgaatggaa tgatgatgcg gttgaagggg cttatagatt tatttgcaaa
     6001 ctctatgata gggcgcaaaa tgttaaaaaa ggtgagcttg tagaattaaa acaagaaaat
     6061 ttaaacaaag aagaaaaata tgcaagatta aaggtatatg aagctttgaa aaaatctttt
     6121 gaagtttatc atcaaagttt tgcttttaat actttaattg cagcttgtat ggaagcttta
     6181 aatgctttag cactttgtaa aaatgaagct ttggagcaag aggcttttta tattatttta
     6241 aatattttag agcctattat tcctcatgtt tgttttgagc ttagcgagga gctttttaaa
     6301 tgtaaaaatt tcaaaaaatt agaacttaaa gaagaggttt ttgtaaaaga tactttaaat
     6361 ttagctgtaa gtattaatgg taaaaaaagg gctgaatttg aaatttcaag tagtgcgagc
     6421 aaagaagaaa ttttagcttt tgcaaaagaa aatactgcta aatggcttga aggtaagagt
     6481 atagttaaag aaatttatgt ggaaggaaag ctagttaatc tagtgattaa atgaaaaaga
     6541 ttttaatttt ttgtataggt ttatttttag gtgcttgtgg atatattcct acatcaaaaa
     6601 tcgctaataa tattttcgat gagaaggttt atgttaatgt tgaattaagt caacaagacc
     6661 caaaaaatag tatctatgtt gccgatactt taaaagaaat ggtaatttca aaattagggc
     6721 gtaaacttgc tttaaaacac gaggcagatg atgtaattaa tgttaaaatg aataatttag
     6781 aatttattcc tttagcttat gataaaaatg gctatgttat tagttataaa gctaaattaa
     6841 atttagattt taatgttgtc tttaaagatg gttcaagtca ggcttttagt acaagtggaa
     6901 gttataattt tgaaatttct ccaaatagta ttattagtga ttctgcaagg tatgaggcta
     6961 ttcgagcagc ttcaagcgag gcatttgatg agtttatttc cgtaattgct attaaagggc
     7021 aaaaacgtga ttccaaatac taatgaaata gcaaagcaaa ctttaattgc attaaaagaa
     7081 agaaaactaa aaccaactcc tgaaaattat acggaaattt ttgaagaatt atctttaaaa
     7141 tatggtatca caagctcaaa taaagctaaa cttgacaaat acaaaacctt gcttttgccg
     7201 atttatcaac aagaattaaa ttctaaaact ataagaagtt tagaagaact aattagtttt
     7261 ttaatttctg ttttaaatag acaaagcgga aaacaattta gtgaattttt tgatttttta
     7321 tataccatat ctaaaacttt gcaaataagt aaggataaaa agataagaga tttggctaag
     7381 gtgacttcga ttagaatttc taaaactatg gatagtgaaa gtatttactt gcttactaaa
     7441 aaatggaaag agcttgaaag aaattatgat gaaaatgact tagaagaaca agctcgtaaa
     7501 tatggcatta gtaaatatga tgattatgat agcgtgatta aaaaactctt agtcaagctt
     7561 gaagagcgta gttatgagca ctttagtgaa ttattatgct tgggtttaaa tccttcattg
     7621 gtagaagatt taaaaattca aggttttata caaaatttaa cacaaaagcc ttttgtaata
     7681 ggcgaagaaa attttaaaaa tgaactaatg gaatttataa atcatcgcat aatggttgat
     7741 aatatgtatg tccaaaaaaa tttaaatttt tttaacgata atctaaaaaa aatctatgaa
     7801 ttgcttgtct tacttaataa atcgaatgaa aaaaatatgg attttatcaa taccttaaaa
     7861 ccagatgaaa atggggaagt aaaacttagt tttgaggatt taaaactaaa atttaaacaa
     7921 cttggagaaa aaattacatc tttaaataat caaattgaat tcacgcaaag cttagaagag
     7981 agagaggctt ggagtgttct taaagagctt gataaaatgg atgaaaattt taataagtat
     8041 aaagttaatt attctttagc tttattttct atagtaaatt accgtttcat tatggaaaaa
     8101 tatggtatgg gaagtttgaa tgaaattttt gttcgattta aaaaaatttt aaaagattct
     8161 tgtagtgaat ttgatgaact gtggatgata gatgaaaaga gttatttgat tgtttcgcca
     8221 ggaaaaagca aagatgaaat tacacagctt gtaaatacaa atcttaaaac tatagaaaat
     8281 tttagattta tttataagca agatattata actcctaaaa ttcacgtggc ttatcttgat
     8341 aagcaaagta agccaagtat taatatttta gatgagttaa taaagcaaat tgcagcggtt
     8401 aatgaacaac ataatgaaag ttgagaattt tttagctcaa aaaagtataa attacgataa
     8461 aattgatcgt tttttgatgt ttagaatgta tgaaaaatat aagaaatatt ttaaaaatat
     8521 tcctataatc caacttatag gcacaaatgg taaaggtagc acgggtagat atttaaccca
     8581 acttttagaa aatttaaatt ataaaatagg gcattatact agcccgcaca ttttcagttt
     8641 taatgaaaga ttttatcttg atggtaagat tgcgaatgat gaagaattag aacaagctca
     8701 tataagactt gaagaaattt ttaaacaaga cttgcaaaaa ttaagttatt tcgaatatgc
     8761 tactttttta gctatgattt tatttcaaaa atgcgatttc attgttttag aagcaggagt
     8821 gggtggagaa tatgatgcta cttctatttt tgaaagaaga atgagtattt ttacaagaat
     8881 tggatttgac catattcaaa ttttgggcaa ttctttagaa gatattgcaa gaaccaagct
     8941 taaagttatg gcacctatag cacttataag tgatgagcaa gagcaaaatg ttttaaattt
     9001 agcaaaaaaa attgcttttt taaaaaaagc taatttgcaa gtttcctcct taaatccttt
     9061 tttgaaagaa aaatttgaga tttattgtaa aaagtttgtt ttaccttatt ttttaaagca
     9121 taatttaaag cttgcattaa aggcttgtga aattttaact tcgcaagaaa aaaccttaga
     9181 agctttaaaa aagttacaag agttaaattt acaaggaaga tgccaagaaa tttctccaaa
     9241 tttttttgtt gatgtgggtc ataatcccat ggctgctaag gccatgcttg ataaatttca
     9301 aggagaaaaa ataaatctta tttataatgc ttatttggat aaggatattt ttcaaatttt
     9361 aaatacatta aagcctatta ttgatacaat acaaatatat aaatataaaa gtgcagaacg
     9421 aaagctggcc gatgatgaaa tttatagtat tgcatcaaag ctaggcatgc aatgtaaaga
     9481 atttgtaaaa ttagaagaga ataaaaaaaa tctagttttt ggttctttta tgctggtaga
     9541 aaatttttta aaggagtggt gtggtaaaaa ataaattcac tattaccatt acagatatta
     9601 acggttcaag acatttttat ttaaatcaaa taatcaaaaa aatagttttt tatattattg
     9661 cttttattgt tttattttta gtttttagtg gtttttatat caaatatctc gatagcaaac
     9721 ttagtgatat cagtgaaaag cgtgaggagc ttttgaaaaa aagcaaagaa ttggaattat
     9781 ctaattcgca aatgcaaaaa agcatagaag aaaaaactca gcagtatgca gctatagaag
     9841 ataaaatagc ttcttttgaa gaggctttgg gcttagaagc agaaaataat cttacaatta
     9901 gtgcaagact tgataatctt cagcttacca atgagcagca acttggaatt ttggggcaaa
     9961 ttcctaatgg atggcctatt gaaaataaag gcattacagg aaattttggc tggagagagc
    10021 atccgctttt aaaaagaagg gaatttcatc ctggtattga tttaagagca gaaattggta
    10081 ctcctattta tgcaccagca agtggagtag tggaattttc aggttatagt gataatggct
    10141 atggctataa tgtaatttta ttgcataatt ttggttttaa aacagtattt gctcatatga
    10201 tgcgcaaaga agtggtcaaa gcaggtcaat ttgttaataa agggcagttg ataggttata
    10261 gtggcaatac aggtctttct acggggccgc atttgcacta tgaggtaagg tttattaata
    10321 aaactttaga acctttgtat tttttaaatt tgcaaagaaa aaatatgaat gattttttta
    10381 atcaagaaag gagagttcca tggcaatctt taataaaggc ggtatcagcc caacatccag
    10441 ctctagctca gaaacaacag taatttcttc aggtgcgaga attgagggta aattttattt
    10501 tgcttctatg cttcatgttg atggagagtt aagtggtatt attcattctg aaagcattgt
    10561 ggttatcgga aaaaatggaa atttaaaagg tgaattacaa gcagataaaa ttgtagtaaa
    10621 tgggtgtttt gaagggcaac ttgaggctaa tagtttagaa attttagcgg gcggagttgt
    10681 taatggtgat atttcaacgc aaaaaatttc tatagaaaat ggcggtcgct ttaatggaac
    10741 tagtaaaatt aaagaagata ctatcaaact tattgaaaat aacaacgaag aataatgcaa
    10801 gcttcatttt atgaatactt acaaaatcca aaaatttgtg aactttttct ttgtaaagat
    10861 gaaaaacaag cagatttact cgctcaagtt tcacgattta agggtttaaa aacctttgtt
    10921 ttacctgatt ttagagcgca gtttggagat gatttaaggg ctttttctaa agaacttttt
    10981 gatctttgta agattttaaa tgcttatcat aaagaagaag aaaaaaaaat ccttatttct
    11041 cctttaaata ctgttttaaa aaaacttcct tcaaaaaaac atttacaaaa ttatcatatc
    11101 gataaaaaac aaaattttga tttgaaatgt tttgaagatg aaatttcaag attgggatac
    11161 gaatttgtag atatagttca ggataaaggt gaaatttcaa ttcgtgcgga tattattgat
    11221 attttttgta tcaatgaaga aaatcctatt agaattttac tttttggcga agagattgaa
    11281 agtataagat attttgattt gcaaagtcaa aagtctattc ctaacgaact agaacatttt
    11341 gaaatttgtc cttttttaaa atattttgac aaagaaaatt atgaaatttt taaggacaaa
    11401 ttagaagatt ttcaaagcga tgctttaata tatgatatca attctttagg cttttggtgt
    11461 attgatgatt tttttgatta tttagaactt gattttttag cttgtgaaaa gtttgatatt
    11521 aatgaatatg aaaaagatat aagttttgtg aatgcaaaaa ttttacctca agctaaaaaa
    11581 tttaaagaat tgcaaagttc ttacaataaa gatttttttg aatttcataa aaataaaaaa
    11641 atcacacttt tagctaaaaa cgaagcttta tttaaagctt tagagcttga agatactcaa
    11701 aatatccatt ttgtaaaaag tgatttaagg cttaatctta ttagtcctga agagctaatt
    11761 atttctttaa atcaaaaaga aaaacaaaaa acaagaaaaa aagctagttt gattatagat
    11821 gagcttaaaa atggggatta tatagtacac gaagattatg gggtaggtaa atttttaggt
    11881 cttgagatga tagtgataag cggagcaaaa aaagagtttg ttgctataga gtatcaaaat
    11941 tctgataagc ttttattacc agtggaaaat ctttatttga ttgataaata tttgggcgtg
    12001 agtggatcta ttccaagctt agataaacta ggtaaaacaa gctttattaa acttaaagaa
    12061 aaattaaaga ctaaactttt agccatagct tctgaaattg ttattatggc ggctaaaaga
    12121 tctttggtgc aagcaaaaaa aattacagtg gatttaaata gacagactga ttttatagct
    12181 agtgcgggtt ttatttatac aagcgatcaa gataaagcct gtcatgaaat tttgcaagat
    12241 tttcaaagtg gaaaagtcat ggataggctt ttaagcggtg atgtgggttt tggaaaaaca
    12301 gaagtcgcta tgaatgctat ttatccagta gttaaaagtg gattttgcgc atttttattt
    12361 gcgcctacga ctttgctttc tcatcagcat tataaaacct taaaaaagcg ttttgatcct
    12421 tttgatataa aggtttttaa actggatcgc tttacaagta gtgcagaaaa aaaacaagtt
    12481 ttacaaaatt taaaagaaaa taaagcttgt gtagttgtag gaactcatgc acttttaagt
    12541 gtagaatgtg aaaatttagc ccttgttatt attgatgaag agcataaatt tggagtgaag
    12601 caaaaagaaa agcttaaaga aatcactcaa aattcacata ttttatccat gtcagcaacc
    12661 cctataccaa gaagcttaaa tcaagcttta agttctataa aatcttatag tgttttgcaa
    12721 actccaccag aagatagaat ggatgtaaga acttttgtca aagaaaatga tgacgcactt
    12781 ttaaaagaag ctatagcaag agagttaaga cgtggtgggc aaatttttta tattcataat
    12841 catattgcaa gtatagagca atgtaaaaag catttattag aacttttttc tactttgcgt
    12901 attttgattt tacattctaa aatcgatgcc aagatgcaag aagaagaaat gttgaaattt
    12961 gaaaacaaag aatatgattt gcttttaagt acctctatcg tagaaagtgg gattgattta
    13021 ccaaatgcaa atactatcat agtagaaaaa agcgatcgtt ttggcatggc tgatttgcat
    13081 caattgcgtg ggcgtgtagg aagaagtgat aagcaaggtt attgttattt tttaattgaa
    13141 gataaaaatg ctatcacaaa agatgcttta aagcgtctag tttccttaga aagtaattct
    13201 tttttaggcg caggttctat tttggcttat catgatcttg aaattcgtgg cggtggaaat
    13261 ttattaggcg tagatcaaag tggacatatt gagcaaattg gatatagttt atatcttaaa
    13321 atgttagaag atgaacttaa tgctttaagt aaaaatgaag tggatcaaaa agaaaataaa
    13381 cttgatttaa aactcaatgt taatgccttt ttaaacagcg aacttatcag cgaagatcgc
    13441 ttaagattag aactttatag aagacttagc aagtgtgagc aagttcatga ggtttatgag
    13501 atcgaaagtg aaattgaaga tcgctttgga aaacttgaca tttatactaa gcaattttta
    13561 tctttgatta ctattaaaat tttagcttta aataaattta aaagcattag taactatgag
    13621 caaaatattc aatttactgc tttaaatgat gaaaaagaac tcatcaaggc aaaaagcaaa
    13681 gatgatgatg atattttaga ggcaatttta acgcatttaa gaaaggctta aaatggattg
    13741 gaataaaact tatgcagcaa tttatagagc aagaaaagat tatttaaagc ctatttttga
    13801 aatcgatcct attgctttaa aagatttagt aggtatggaa agtcaaaaaa aagcacttta
    13861 tgaaaatact ttaaatttca ttcaagataa gggagcaaat cacgcacttt tatggggatc
    13921 taagggcact ggaaaatcaa gtttaattaa agctatattt aatgaattta aagaacaggg
    13981 cttaagactt gtcgaattaa ataaagaaga tttatttgcc ttagcagata tcatcgatga
    14041 aatcagatta gaaaatttta aattcatact tttttgtgat gatttttctt ttgaaaaggg
    14101 agatgatagt tataaatttt taaaaccttt acttgaggga agcatagaaa aagccccaaa
    14161 taatgtaatt atttatgcga gttcaaatcg taggcattta ttaagtgaaa gcattactga
    14221 taatcttgat acgcaaatca cacatacaga acttcattta agcgatgctg ctgaagaaag
    14281 attaagcttg agtgatagat ttggtttgtg gttaagtttt tatcagggaa atttagaaga
    14341 gtatttaaag atgatagatt tttattttaa agattattct tgtgataaag agcttttgca
    14401 cgctaaagct aaagaatttg ctactctaag agcaagtaga agtggtcgta ccgcaaagca
    14461 attttattta gcttttaagg agaattttaa atgactggag cacaaatttt taccaagctt
    14521 ttaaatttgg atttaaatta tcatgatttt gattggcttg aaaatcaagg attgagtgaa
    14581 tttgagcttt taatttctgt cgttttaact caaaatacaa attggaaaaa tgtcttaaaa
    14641 gctttagaaa atttaaaaaa agaaaatatt gcaagcttag aacaaatcaa tactttatcc
    14701 aatttagaac ttgcaacttt aatcaagcct agcgggtttt ataataccaa agccaagcgt
    14761 ttaaaaggct tagtagaaag tatcataaac acttatgaaa atttagaaaa ttttaaaaca
    14821 aatgtaagca gaaaatggct tttaaatatc aaaggtttgg gttttgaaag tgttgatggg
    14881 atattaaact atctttgcaa aagagagatt ttggttgtag atagttatag cttgcgtttg
    14941 gcttttcact taggttatga gtttgaaaat tatgaagaat taagagaatt ttttcaaagt
    15001 ggtatagaga gtgagcaaga aaatttgtgt aaaattttag ggagaaaatg cgaactttac
    15061 gaactttatc aaatttttca tgctttgatt gtagcttttg caaaacagag ttttaaagga
    15121 caaaaattaa gccctaaggg tgaagaatgg attaaaattt taaaggaaga tttatgaaag
    15181 caaaaggaag cgaacttata cctgttttaa ctatagcagg aagcgattgt agtggtggag
    15241 cggggataca agccgatctt aaaaccttta gtgcgcacaa tctttttggt atgagtgtgg
    15301 ttttaagtgt agtagctgaa aataccgcaa gggtgatttc tgtacacgat atacctactc
    15361 aaagcgtaga tgaacaaatg cttgccgtat ttgaagatat agtgccaaag gcaactaaaa
    15421 tcggaatgat aggttcttgt gaattaatga gctgtgtagc taaaaattta agcgagttta
    15481 aacctcaaaa catagtgatc gatcctgtaa tgtttgctaa aaatggctat gctttaatgc
    15541 cgcaagaaaa ttgtgatttt ttcaagcaaa ccatagtaaa atttgcagac attcttacgc
    15601 ctaatattcc tgaagcagag tttttatgcg gttttaagat cgctaatgaa gagcagatga
    15661 taaaagcagc taagcattta tgcagcttgg gggctaaggc ggttttactt aaaggcggac
    15721 atagtgaaat aaatgccaat gatgtgtttt atgatggaaa agaaatttat attttaaaag
    15781 gcgaacgcat agaaactaaa aatactcacg gtacaggttg tacgctttct tcggctattg
    15841 ctagtaattt agctaagggc aaggatttat ttcacgctgt tagtgaagct aaagagtatg
    15901 taagaaatgc gatttattat tcacttaatc ttggaaaagg ttgtggtcct acaaatcatt
    15961 ttttcaagtt tctagatgaa aaataaatta gatcttagcc tttatttggt tgctactaag
    16021 ggaagtaaaa gcgaggagtg ttttttaaat actttagaaa atgctataaa aggcggagta
    16081 agtatcatac aacttcgtga aaaagagctt aatgcaagag aattttataa actaggctta
    16141 aaggtgcaaa aactttgcaa gtcttataaa ataccttttt tgattaacga tagggtggat
    16201 atagctttag ccttagatgc tgatggggtg catttaggac aggaagattt agaagcaaaa
    16261 ttagctagaa agcttttagg agatgaaaaa atcataggct taagtcttaa aaagttagaa
    16321 caacttgagt ttatacaagg agtaaattat ctaggttgtg gagctattaa ggcaacgcct
    16381 actaaagaaa gttcgctttt aagccttgag cttttaagtc aaatttgtga taaaagccct
    16441 ataggggttg tagccatagg tgggattgac aaagaagcac ttgttgagtt aaagggtata
    16501 aatttaagcg gtgtggctgt ggttagggcg atcatggatg ctaaagatgc ttttttggca
    16561 gctaaagagc taaagcgtaa aatctatgaa aatttatctc ttaaatgaaa ctccttttga
    16621 aggggtggaa aatcttattt taaatgagat tgttttttat gattttagtg tggatttgag
    16681 tttgtatgat gctttaatct gcacttcaaa aaatgcttta aaagctttac aacatgcaaa
    16741 aatcacttta aatttcaaac tcaatttata cgctgtggga caaagtacag ctcaatacgc
    16801 taaaaattta ggttttaaaa agattaaaat tccatcaaag gcttatggaa aagatctttt
    16861 tcttgaattt aaagaggagt taaaaatgca aaaatgtttg tatctaaggg ctaaaaatat
    16921 tgtttcaact ttaaatttgg atcttaaaaa tgtaggtgtg gatttagatg aaatgattgt
    16981 ttatgaaaat gtttttaaaa aaggcgacaa aaagcttatc catcctgcta tttttatatt
    17041 cacctctcct ttaagtgtag aaaatttttt aaaattttac agcttaaaag aagaagataa
    17101 ggttgtagtt atagggcaaa gcacagcaaa gaagctttta aattttaaaa atctttatat
    17161 atgcgaaaat caaagtcttt taaactgtgt taagctcgct aagactttgg tttaattttt
    17221 taaattccaa aaattttctt tgggataaat aataatgctt tttgtgagta aaatttcatc
    17281 attgacgttt ttatcacgat ttaaagcaat actaatgtgg gctataataa caccatcttt
    17341 gcttaaattt gcatcgggat tgaagttgga aaatttaaaa ttaacacatt gtgcaatagg
    17401 ataaaaatat tttattttaa tcaaagcttt tgtgtaatta aaatatatat tatctaaaca
    17461 ttctttattt tcttgctttg cttgatataa aaaatattta gaaaattgtg ttgcattgtg
    17521 acttaaaatt tgagcttgaa ggtagtaata actatcttgg attatttttg gagtatagct
    17581 ggatatgttt aaggtcaagc tcatccatag acttattagc agtattaaaa aaattgtcca
    17641 aattaaaaca taagcttttt tcacagtaaa attctttttt caaggcaatg ttttgtttgt
    17701 ctttttaggc aaatttttaa tttattgttt tgcaggttaa atgagcttat gtttttagaa
    17761 attaatcctt gttggtttaa ttgttcatta aattttggct ttatttcata tataagttct
    17821 tcattttgca atttgataac taattgagct tgcaaaggaa taaaactacc tgtaaaattt
    17881 gcagatatac cattttccaa gatagatatt ttttcaatct tattaatttt ataagcatag
    17941 ctaatatgtt cattgtcgtt atataaatct tttctatttt ggagttgtgt tttaaaatca
    18001 gaatgaggtg aataaagtgt atgattattt tctaaaataa gagcagaatt aataagataa
    18061 agtttattat cttttaggct aattaactca tcttttaaaa gacattttaa tgtattctgt
    18121 gaaaatgtaa tattaataca attttgtatt aatttttcta ttttaagcaa gtttaaatgt
    18181 gcttgagtga taagattgtt tgtatgtaaa gcagtaaaat ttaaatgata aaaatccatt
    18241 aaaggttttg aaagtaagct agttataaaa gtaaaaagta ttagtgatat tataagttca
    18301 aaaagtgtaa aagctttgct cattctttaa aataaacgct ataattttga tcttgaaagt
    18361 ataatttttg aaattgaaat ataccgtcat taacaaactg ttcttgtaaa actataggtt
    18421 ttaaggctga agtttgaagt atgatggttt taaaaatagg cttttcatat aattcttctt
    18481 gaagtttata gagtctttca aaaatattta aattttcata gtttttgtaa agttgaatat
    18541 agtaataaaa aatgccaatg aaaattaaag atatgatcgt tatagcacta atgctttcta
    18601 taagtatgaa agcctttttc atttagcgct gctagcattt atggcttcaa aaaaacttcc
    18661 gcgaattcct ttttgttcga gtatttttat gccttttatt gtaactccgc caggggagca
    18721 aatattttct ttgataatag ctggatgttc atgttctagt aaagcactag agcttttaaa
    18781 taaagagcgc gtaagattga gactaagttc ttttgacaaa ccttcataaa ctccagcatt
    18841 agcaatgctt tctgctataa gtgctaaaaa agcaggagcg cagccgctaa tcgccatagc
    18901 tgcattcatt tgtatttcat tatctaattt ataagccgag ccaaaagttt ttaaaatgtc
    18961 taaaatttca ttttcgaaat gagagttttt aagtatatat ggtgtggttg aagccttgta
    19021 tttagctgct gtattgggta ttattctaac ataattttga gctttgatgg tttgtagttt
    19081 ttcaaaatca acattggcta aaacagagat taagatacgt gcttgtcctt ttagcatttg
    19141 agcaatattt tctaaagcat aaggtttaaa tgctaaaata acatctttac cttctatgtt
    19201 aaaatctttg taaagtaagg ttttaaagcc ttctttggtg agggcttgaa gtttttctat
    19261 acttcttcct actatacaaa tttcataatc atcttttaat ccataggcta aggctgttgc
    19321 catagctcca tttgcaagta tatagagcat tattttttaa tataattagc aatttgatca
    19381 gcttgaaaaa agtccggata attaactgta tctagtatca cttgtaccat agtattatta
    19441 tcaagattaa tgactactgg agctagaaaa ttcactgtcg attcttcaat gctttttgct
    19501 atggctacta tattaaaaat tttcatatta gattcaggtg ttaaagaaag aagctcttga
    19561 taataagttg gtatatcaaa ttcataatca ggtctaatca aataaggatt aattaaaaca
    19621 aaagaaaagt ctttaccatc aagactttta agtcttacaa atacttcatc gatagttgaa
    19681 aattccatat ttttggtttc ttcaaaacct aagatagggc atttaacagc tagggtcatg
    19741 ttttctcctc aagttataat gtttaatatt ttaacataaa ataagcaata atcattccaa
    19801 aattttaaat tatttaatta attttattat aattttagaa gaacataatt ataaaatcgt
    19861 taaaatatag atttttgaga atataaatca aggtgaagta tgaaaaaagg tattttttta
    19921 ttggtttttt taagtgtttt ttttagtgcg tgtagtacga aaaatgatga aggtttatac
    19981 aatcttagtg ctagtgagtg gtataagcaa attattaaag atttgcagga caaggatttg
    20041 gaaaaagctg atgatcatta taatggtatg gcaagtgagc atgttgccga tcctttattg
    20101 gaaactactt taattatttt agcacaagct catatggatg aagaggaata taagttagct
    20161 gaattttatt tagatgaata taataaaaaa tttggaaatt cacgcaatgc tgattatatt
    20221 cgttatctta aaattaaggc aaaatttgat gcatttgcag tgccaaatcg taatcaggct
    20281 ttaatgcttg aaagccaaaa agaaatagat acttttttga aagattatcc ttatacagaa
    20341 tatgaacctt tggttcagac aatgcttaca aaatttaatt tagcggtttt ttatcttaat
    20401 agcactatag aaaatctata ccagcgcata gggcatgatg aaagtgcaca aatttataaa
    20461 caaagacttc aagaaagtga attttatcag caaagtatta tcaaacctga gcttccttgg
    20521 tatagaagta tatttgaaag attttaataa acaaggaaaa taaatgcaga ttgaagagat
    20581 acaaaattat ccagcaaatt taccagtatt ggttgaagat gaattatttt tatatccttt
    20641 tatgataact cctattttta ttaacgattc atccaatatg aaagctttag atcttgcgat
    20701 taaaaatgat agcatgcttt ttgttgcacc ttcaaagttg gaaaatggaa gaaattttga
    20761 tgaaatttat aattgcggag tgattgggac tatcatgcga aaagttcctt tacctgatgg
    20821 aagggtgaaa atactttttc aaggatatgc taagggtaaa attatagagc aaatttctaa
    20881 taaaccttta gaagccaaga tagaacttat aaaagaagac tttttagaag gaactaaaaa
    20941 agaagcgctt cttgaagttt taaaagagaa ggtaaaaaat ttggcaaata ttagtcatta
    21001 tttttctccg gatcttttaa gaacaattga agaaggtttt gatgcgtcta ggatttgtga
    21061 tttgatttta aatactgtgc gtattaaaaa acaagttgct tatgagtttt ttgttttaac
    21121 agatcttgag caaaaattag taaaattaat agatttaatt gcccaagaaa tagaagccaa
    21181 taaaattcaa aaagaaatta aaaataaagt acattctcgt attgataagg taaataaaga
    21241 atatttttta aaagaacaat taagacaaat tcaaaaagag cttggttctg acacacaaaa
    21301 agaagatgag gttagagagt atcaaaagcg tctggagcta aagaagaaat ttatgcacga
    21361 agacgcttat aaagaaatca aaaaacaaat tgaaaaattc gaacgcattc atcaagataa
    21421 ttccgaagca tcgatgattc aaacttacat agaaacagca ttagatattc cttttgaaaa
    21481 aatttctaag aaaaaacttg atattaaaga agtttcaaaa cagctcaacc atgatcatta
    21541 tgcattaaat aaaccaaaag aacgcataga agaatatttt gcagttaggg aacttttaga
    21601 aaaaagaaaa atagcagaaa aagatggtgc taaagttata ctttgtcttt atggacctcc
    21661 tggcgtgggt aaaacttcac tggcaaattc tgtttcaaaa gctttaaaaa gagagcttat
    21721 tcgcatagcc ttaggcggac ttgaagatgt taatgagcta cgtggtcatc gtagaactta
    21781 tataggcgct atgcctggac gtattaccca aggactcata gaggcaaaac aaattaatcc
    21841 tgtaattgta ttggatgaaa ttgataaatt aaatcgcagt tttagaggcg atccaagtgc
    21901 ggtgctttta gaaattttag atccagagca aaattctaaa tttagggatt attatttaaa
    21961 ttttaatatt gatttaagta aagtcatttt tatagcaacg gcaaatgata ttagcaatat
    22021 tcctgcacct ttaagagata gaatggaatt tatagaactt agctcttata ctccaagtga
    22081 aaaatttcat ataatgaaaa aatatttaat tccagatgag cttaaaaaac atggcttaaa
    22141 atccaatgaa ttatctattg atgatgaaac tatagagtta atcattagtg attatactcg
    22201 tgaatcagga gtcagaaatt tgcgtcgcaa agtggcagag ttgtgtcgta agagtgctaa
    22261 aaaactactt ttagaaaata ttaaaaaagt cattattaat acaaaaaatt tgaatgaatt
    22321 tttagataaa aaagtttttg aaatagaaaa aaataatgga gaaaatcaag taggtcaggt
    22381 taatggtttg gcttggacaa gtgtaggtgg agatgtttta aaagtagagg ctgtaaaaat
    22441 taaaggtaaa ggagaattaa cgctcacggg aagtttgggt gatgtaatga aagaatcagc
    22501 tagaattgct tttagcatga taaaagtttt aatcgatgaa ggaaaaataa aaatacctaa
    22561 aaaaataatt attgatccta aagttaatgt ttatgatagt tataatattc atatacatgt
    22621 gccagatgga gctactccaa aagatggccc aagtgcaggt attacgataa gcacagctat
    22681 tgcttctatt tttagtgata aaaaggttaa agcagatgtt gcaatgacgg gtgaaataga
    22741 tttaaaagga aaagttttac caataggcgg attaaaagaa aaattaattg cagcttataa
    22801 agcagatata aaaacagctt taatcccaag aaaaaattac gaaagagatt taaaagatat
    22861 tcctagtgag gttagagaca atatggaaat cattgctgtt gatactttca gtgatgtttt
    22921 agaatatact ttggtttaat tttattttga ggataaatgt ataagaaagc aaacttttta
    22981 caagtttgct tttaaaagat tatagtcctt caaaaggatt attgattact tcttttctat
    23041 ccactatata agggataagg gctacatgtc ttgcgcgttt gattgcaact tctaccattt
    23101 cttggtattt tttgcttgtg cctgttaaac ggcgtggcat gattttaaat ctttcagata
    23161 aagcatgttt taacattgct gtatctttat aatcaataaa ttcaactttt gcttcagtgt
    23221 atttgcaata tttgcgagag tattttcttt tttctgccat agtttatcct ttaaaatggt
    23281 aaattagtat catcgctatc ataagcatcg atatcaattt cttttaattt ttcttcgtgt
    23341 tgtgggcttt ggtttctctg tggagcaggg tttgcttttg ctttattaaa attttgattt
    23401 tcactcatat aaggatcata gctttgattt tcatagtttc cactataatt gttgtttgaa
    23461 aagctattat tgccaaaatt tccgccttgt tgtggagcat tggaattgcc aagcatttcc
    23521 atattttcaa cttgaatgct atgtttagag cgattttgtc cattttgatc actccattgt
    23581 tcaaatctca aacgtccttc tatgagtact tttgaacctt ttgtaaggta ttggtttgca
    23641 acttctgcgg tgcgaccata aaagcttata tcaataaagc aagtttcttc tcttttttct
    23701 ccatttgcgg taaatcttct tgttactgct atagcggaag ctccaatagc actaccgctt
    23761 tgtgcataac gcatttctat atcacgtgta agatttccaa ccaaaacaac tttgttaaac
    23821 atctttttcc ttattgaatt tcaggagcat ctaaaggttt aatttctttt ttagattgct
    23881 taatcccgtg gcttagtttt tcccaagctg caatttcttt tttattttca tattttacga
    23941 ttaaaaatct tattacttct tcagtgattc ttaacaccct ttcaagctca gcgatcaagt
    24001 ttgtaggagc tttgaaataa atcacaaaat aagttcctct ttcgtatttt ttgattttat
    24061 acgctaattt tctagtaccc attggaacaa cagtttcaat ttctgcacta tttttggtta
    24121 ggacttcttt aacgaattcc aacttcgtat tcacttcctc ttcagtaagt gttggtttta
    24181 agataaataa aacctcataa tgtttcatct tttctcctta tggatattaa agcccatttt
    24241 tatgagcaag gattttgcat aaagcaagac tagattatat caaaatatac ttaattagtc
    24301 ttgaatactt aaggttttat ctaaatttgt tttgatttct tcaagcatag caaaacgttt
    24361 tttatacatg gagcgttttt gcgaagggat ttcttctagg tttttttgag agtggtggag
    24421 tttatagtat ttgtgtttat tgatttttat taattctcca ccattttcta gccaaatttt
    24481 ttgataatct acaaaatagc ctttttcttt tcctttttga gaacggattt gatttttttc
    24541 atgtacacct aaagtagctt gaagttttaa aatttcacaa agcatcttag agcattctat
    24601 aagtaaagca acagggcgca aaccatgaca ttttttagtt aaaattttat taatttctaa
    24661 aatattaaaa tctttgtatt tatgtccttg tatacaagaa agtagaagat tgttttctaa
    24721 agtaaagcaa aaattacatt gtaagattgt gtatttttta aattttaaag aaaaagccca
    24781 aaaaccttct tcgcaaacat tatagttata tcctaaaaaa agctcaaaat cttcatcaaa
    24841 agaaaaaatt atttgttcct cgggaagaaa tttaaaacaa gcgagtccct tatcaacatc
    24901 ataaataagt gttttaacac gttcatttgc tttaaaactt ttatcgcaaa atcttcttgt
    24961 agcattgtaa caagcataag gtctttgaga gaaaaagtct tttaaatgtt tatttttttc
    25021 tttattaagc gttttttcta gaagtcttac ttgaggaaaa tataaaattt ttcttgcttg
    25081 aaaacgcaaa tagcgccaaa agattatact ttttcttcta tcagtaaaat ttggaatagg
    25141 gtaggaaaat tttttattca cctataatcc ttgatatatc attataagtt gcaaagagca
    25201 ttaaacttaa aagtattgcc atgcctgtat agcttaaata ttcaaaagta cgctgtggaa
    25261 ctttgcgtct aaaaatcatt tcataaagat taaaaagtat atgtcctcca tcaagcatag
    25321 gaataggtaa aagatttaaa atgcctaaat ttatagaaat taaagcagtg ataaataaaa
    25381 gcaaagtaaa gctattttgt gcagcctttg aggtaatttc agtcatggtg ataataccgc
    25441 ctaaattttt tgcttcaact tcaccactta tgagttttac aatacccttg atgatgagtg
    25501 tagaagcttg aaaactttct tgtgcggcat atttaaaact ttctaaacct tggtgtttta
    25561 caagagtgct tgtcccattt ggactgactc caagttgagg tttttcaacg atttgtccaa
    25621 agtcattgta tccttgtcct atttttggag ttaaaataaa ttctaaattt tttccttctc
    25681 tattgattaa tattttcaaa ggatctaaac ttaaatgctt tgaaatttca tcaaaggttt
    25741 gaattcttat accgttaatt tctaagatag tatcattttt ttgaagtcct atttcttgtg
    25801 cagcagagtt tgacgctatg tttcctattt gcggagcaag tttgtttaga cctaaatttc
    25861 ctatgataat ataaagaaaa aaagctaaaa ttagattaaa aaatggtcca gcaaaaagaa
    25921 tataaatctt ttttaaagga cttaaaatgc tatagctatc tttgtctaga ttttcaaaac
    25981 caggacgcat atcatcttgt cctttaagtt taacatatcc tccaagtggt aaagtgctta
    26041 agcgatagtt tgtgccttta aattcacgct ctataagact ttttccaaat cctatactaa
    26101 aaacttcaac ttttacaccc aaagatcttg cagccaaaaa atgtcctaat tcgtgaaaga
    26161 aaattaaaaa tgagatgact aaaacagttg ctaaaaattc aatagaataa aatttaattc
    26221 ccaaaatcaa aataacaatt aaaaataata aagatctcat ttttctcctt ttttttgagc
    26281 ttttatataa gtatagatgt attcaaatcc agaataaaga gttaaaatca aagctatgta
    26341 aagtagaatt tcaccgccta tccactccat gattaaaaat cctatcgcag tcatttgaaa
    26401 agcggtttta agtttgcctg caaaagaagc attgacattt aaattttcgc taatcattac
    26461 aactctaaaa cctgtgataa aaaattccct tactaatata atataaatta cccattcatt
    26521 agcttttcct gtaagtaaaa gccctaaaaa agctgctaaa acaagcattt tatcggctaa
    26581 tggatctaag attccaccaa gttttgtagt ttgtttccaa gttcttgcga tgtatccatc
    26641 aaaaaaatca cttaaagctg ctaatgaaaa agttaaagca gcaaaatagt taatccaact
    26701 ttgatgaata ttttcaaaat gataaattaa taaaaaaaat agcaaaggcg ctaaaaccat
    26761 tctaaaaatc gccaagatat tgggtaaatt cataacaagc cttgtgaaat taaatgtaaa
    26821 attataatca aaattgtata aaatttaagc aaagacttag taaaaataca aaaaagaatc
    26881 agtttatttt tatttaaatt ttgcttaaaa gcaaaattta aataaatttt acaacttcat
    26941 caaaactaaa acgatttttt tgaggatttt ttttatcgtt gcaatatcct aaagccacca
    27001 ccaaacttga tctttctttt tgaatatcaa gtgataaata agaatcaagc ttttctttat
    27061 caaaaccacc tatagtgcag cttgctatat ttaaagcatt agcactgtaa agtatgctag
    27121 ctagagctat atgagcttgt tctcttgcat aagatatttt ttgttcttga tttagagatt
    27181 ttaaaaaagg catataagta tctaagcgtt tttgcatttc tgtttcactc atatctcttt
    27241 ttctaagttt ttcttcaaaa taatccaaaa aatcaagtct tgaaatgatt ataattaatg
    27301 cagcacaatc ttttacatgt ttttgttgat tgcaaatttt agaaagttct tcttttcttt
    27361 tctcatcttg cactactata aatttccaag gttccagtcc caaggagctt gggcttaatc
    27421 ttgctatttc taaaatagaa tttaaatgct cttttttgag tttttcattt ttaaaatttc
    27481 tacaagaata tcttgtgcta aaaatttcaa gttctttttt cattattttt ccttgtaaaa
    27541 ttcgacgact tcattaaaat ttaagcgttg agtagaatat tttggttcat gggctttata
    27601 tcctaaggat aaaattacag cagtttcaaa aggataagtt aaattaagaa aattatcaac
    27661 tttagctttt tcaaagccac ctatcataca agaatcaata cctaagctca ttgcagctag
    27721 cgacatttgc atcatagcaa gatagcattg aagttgtgcg taatgataga gttcattatc
    27781 attcattgca ttggttttat gggtgtaaat ttctaaaatt ttttgaaaat tttcttcgct
    27841 agaacctgag aaacgacgca cttgtttttg tgcaaattca tctttgcttt gaagatcttt
    27901 tcttgctaga aaaatgatat tatgactcgc acttgctaca ttttgttgat tgtaacatag
    27961 ggttgagagt ttaagattgt gttctttttg ttctaatact acaaatttcc aaggctcaaa
    28021 tccatgtgag cttggggcta agactccact ttctaagata aaatgcaaat ccttttcatt
    28081 gattttttta tcattaaaaa gtttacaagc tctgcgtttt gaaattagtt ctttaaaatt
    28141 cattttattc cttaaaatca aaaataataa tattaattat aaaatgcaaa gcttaatcaa
    28201 aaaatattat agtttgatat ttttcttaaa aacaaaaccg gatttttcaa aacccatttt
    28261 ttggatataa aattcatgag cttgtgttct aaaaaaactt gaacttagtt ctaattcttc
    28321 atatccttga tcttttgccc aaatttggat ttttttcaaa aaagcttgac ctataccttt
    28381 tcctcttaaa gcttcatcta cgacaaaatc acaaatataa agacaatgat tatgataaag
    28441 tacattaaag ggcatgactc cacaagctgc tttgtagctt ccctcatttt cataggcaaa
    28501 aagtttataa tgttgagttt gtgtagcaag ttggattttg tctaaaaaat ctttcaaaga
    28561 taggttattt cttaattgtt ttatcaaggg ataaattttt tccaagtctt cttttagctt
    28621 aatttctttc atttttaaat cccttaaatt tcaaaaatct caggttttaa ttttaaaagt
    28681 aggcaaaaag ttgccaaaac agcttgttct tgcataaatt cacgatctcc atctaaataa
    28741 agcgtttctt ggataaaagt tccatctcta aacattgcac ctatataaat agtgcctgat
    28801 tttatttttc cctcatcttt ttcgccaact actccgctaa tagctaaggc aaaatcagga
    28861 ttagctgttt taaaaatacc ttttagcata aaataaacac aacgttcact gtattcgcca
    28921 ttattttcta agatgctttc gctaattcca agccattcgt gtttgatgcg gttggaataa
    28981 cttacaatag atccttcaaa aatttcactt acacctgaaa ttttggttaa ggtgcttgca
    29041 caaagtccgc ctgtgcaact ttcagcaaaa gaaattttta attttttttc taaaagttta
    29101 gagcttataa aatgtatagg atctttacct aaaaacacct tttgtccaaa aagatttttt
    29161 acgctattta aaaaaccatc aagttttcca aaattagcgc aagtggcctt aataagcaca
    29221 agattatcta aaagcttggt taattttata tttatctcat aagattttgt tagggtttgc
    29281 agtagtaata tagcgctttc atcatccatg ccaaaaatgc aaaaatatgc aaaatttaat
    29341 tttatatgcc caagaagatt gggtaatttt tcgcttggat ttattttaac gacattgatt
    29401 tttgaatttg aaaaattaca cacaaagcta tttttactaa attctgcttt atctggaacc
    29461 aaggtatcat cttttaagat aagattatca tcatttaaag ttgctaaaat tttagcaaca
    29521 gtcgcataat gcaaagggct tgtaaataaa gtgataaaat catactgatt taagaggttt
    29581 tcaagcaaaa agggtaaatc tttatcggtt ttactttgta tgcgaatttc gttgatttct
    29641 ttaaattttt cttcataagt tctataaata taatttttga atttttcgtt tatagtaagc
    29701 tcatctccta taagataaag caaatgtttc ataaattttc ctttttttct tataattata
    29761 gccaaaaaca aagtagaaat taaagctaat ttgagtagaa tttaagatta ttaaaaatta
    29821 ggtggaaaaa atggactaca aagaaactct acttttgccc agcactactt ttgctatgcg
    29881 ggcgaattta gcggaacttg aaccgcaaag atttaaaaaa tggtttgagc aaaattatgc
    29941 ttatgaaaca atgaaagaaa atcgcaaaaa tgcgaaaaaa agttttactt tacacgatgg
    30001 ccccccttat gctaacggac atatccatat aggacatgct ttaaataaaa ttttaaaaga
    30061 aactattatc aaaacacatt attttaaagg tgagagtgtg cgttttactc cagggtggga
    30121 ttgtcacggt ttgcctatag aacaacaagt agaagtaaag cttggagaaa agaaaaaaag
    30181 cttaagtaaa aaagaaattc gtgagttttg cagacaacat gcgagtgaat ttgtagatat
    30241 ccaaagagaa gaatttaaaa atttaggcat tattgcggat tgggataagc cttatttaac
    30301 tatgaaattt gagtttgaag cagcgattta tagaacttta tgtgagattg ctaagaaagg
    30361 cttactttgt gagcgttcta aacctgtttt ttggagttgg gcggcaaagt cagctttagc
    30421 agaagctgag gtagaatatc aagataaaga agattattct atctttgtgg cttttgattt
    30481 ggatgtaaaa gcttgcgaaa aattaggtgt ttcaaaagca agcgcagtga tatggacaac
    30541 tacgccttgg actttagtgg ctaatcaagc tatagcttta aatcctaatg aaaattatgt
    30601 gatcaccaaa gaaggtttga tttttgcaag tgctttactt aaaagtatgg tagaaaaagg
    30661 acttacaagt ggagaaattc aaaaagaatt aaacgcaaaa gaatttgaaa aacttgaagc
    30721 tatcaatcct ttaaatggaa gaaaatctgt tttaattatg ggtgagcatg tattgatgga
    30781 tggtggaagt ggacttgtgc atactgcacc aggacatggc gaagatgatt actatgcttg
    30841 tttgaaatac ggtattgaag ttttaatgcc tgttgatgat ggtggatgtt atgatgaaac
    30901 tttaagagct aaagagcttt tgccttctca tttgcttgaa gagtttatag gtcttcatat
    30961 ttttaaggct aatgaaaaaa ttttagaact tttaggcgca aaactgttac attcttctaa
    31021 atttatacac tcttatccgt tttgctggag aacacataaa cctgtaatct atagagctac
    31081 taaacaatgg tttattttaa tggatgagcc aaaacttcaa ggaaaaacct taagagagtg
    31141 tgcaaaagaa caacttttaa aaacaacttt ttatccgcaa agtggggtaa aaagaatagg
    31201 ttctatggtg gaaaatcgcc cagattggtg tatttcaaga caaagggact ggggaacgcc
    31261 tatagccttt tttagagata aaaacactaa agaagtcatt tttgatgatg agctttttga
    31321 ctttgtagcg gctatttttg aaaaacacgg cgctgatgcg tggtgggagt ttgaaatcaa
    31381 agatttaatt cctacaaatt caaaatacaa cgctgaaaat ttagaaaaag tatatgatat
    31441 tttagatgtt tggtttgata gtggaagtac ttttaatgcg gttttaaata gcggacttta
    31501 tgacgcagga gaaaaaagag caagtatgta tttagaagga agcgatcaac atcggggttg
    31561 gtttcaaagc tctttgcttg taggtacagc gatcaatgaa agtgcacctt atgaaagcat
    31621 tttaactcat ggttttacca ccgatgaaaa agggcaaaaa atgtctaaat ctaaaggcaa
    31681 cgtgatcgct cctgaatatg tagcaaaaac ctatggagtt gaaattttaa gactttggat
    31741 acttttaagt gattattcaa gtgatttaaa aatttcagac aatatcttaa aacaagtagg
    31801 cgaacaatac cgcaaaataa gaaacactat aagattttta cttgccaata ccaatgattt
    31861 aaaagattta aaagttaaag aatttagttt tattgataaa tggatattaa gccgtgcaac
    31921 taaagttttt aaagcaagca aagaggcatt ttttgcttat gaatttgcta aaggttttag
    31981 tttgctttta aatttcttaa gtgcggattt aagtgggatt tatcttgata tcagtaaaga
    32041 tagactttat tgtgatagcg aaaatgccca aagaagaaaa tctgctcaag tggctatggc
    32101 tttgatagca aaagagcttt taaatttact tgctccaaat ttaagctata gtgtagatga
    32161 ggctttagaa catgctaatg ttttaatcaa aggcgatgca aaagatgtat ttgatctaag
    32221 tttaactcag gattttgatt atgattttgg tatagatgat acatttttaa tgagtgctag
    32281 agagaaattt tttgaacaga ttgatatact taaaaaagat aaaatcatta aatctacttt
    32341 ggaattaaat ttaaacatca gttttaataa attcccaaat gaggaattag ccgattggtt
    32401 tatggtaagt caaatcagca atgaaaatga agaaattttg gctgaatttg aagtagagaa
    32461 tgagaaattt aaaatcacca aagcttcact ttgtaaatgc ccaagatgtt ggaaacttca
    32521 aagtaaagat gaagaaacac cttgtttaag atgtgaagaa gttttaaaag ggattcaatg
    32581 ctagaaaatc ctattccaaa tagcattatc atcacaacta tagcggtggt tttggctttt
    32641 agtgctttag cagtattttt gatcaaaaaa acaaaggaaa ataaatgata actttaaaag
    32701 aagctttaaa atactccaaa gaagaacttg aaaatttaaa aaaagaactc aatgaaaaag
    32761 caaaaaaaga aaaaaaaata ggtgcttata tcgaacaatt tttagataaa gacttaagtg
    32821 tttcaggtga aggtgtgcct gtagctataa aagataatat cagcgtaaag ggctgggagc
    32881 ttactagtgc gagtaagatt ttacaaggtt atatcgctcc ttatgatgca agtgtgattg
    32941 ttaatttaaa agctaatggt ttttctcctt ttgggcgttg caatatggat gaatttgcta
    33001 tgggaagttc aacagcgagt tcttattatg gcaaaacttt aaatccttta aattttgagc
    33061 gtgtgccagg tggttcaagt ggtggaagtg ctgctgcggt agcgggtggc ttggctttgg
    33121 caagtttggg ttctgataca ggaggatctg tacgtcagcc tgcagctttt tgtggttgcg
    33181 taggatttaa accgagttat ggaagagtga gtcgctatgg cttagcttct tattcttcaa
    33241 gtttggatca aattggggtt ttaacgcaaa atgtagaaga tgcggcaatt ttatatgatg
    33301 cgatcgcagg atatgataaa atggatagca cgagtgcaaa tatcgagttt atcaaaaccg
    33361 ctccaaattt aaatgcaaat aaaaaattaa aaattgcagt gattgaaaat tatgtcaatg
    33421 atgcagatag tgaagtaaaa aacgcacttt taaaaaccat agatatgtta aaagctaatg
    33481 gacatgagat tgtatataaa aatttgcttg attctaagtt tgatatcgca gcgtattata
    33541 tcatcgcaac agctgaagca agtgcaaatt taagtcgtta tgatggggtg cgttatggca
    33601 agcgttctga aaatatccaa aatttaaaag aaatgtatgt aaatacacgc agcgaaggtt
    33661 ttggagaaga agtaaaaaga agaattttgt taggaacttt tgttttaagc agtggatatt
    33721 atgatgcgta ttatattaaa gcacaaaaag ctagagcttt tattaaggca aaatatgaag
    33781 aaattttgca agattgtgat cttattttta tgcctgtaac gcctacaacg gcttttaaat
    33841 ttgatactca aaaaagccct atgcaaactt atttagaaga tgtttatact atctctgtaa
    33901 atttagcagg acttggaggc attagtgtgc ctgttgcaaa agataaagaa gggcttaata
    33961 tatcagcaca actgatttgc aaagcttatg atgaacaaac cttgttagat ggggctttaa
    34021 gtttagaaca aatgattaaa cattaaggat gaaagatgaa aattgtaaaa agagctttaa
    34081 cttttgaaga tgtattattg cgtcctgggt attctgaagt tttacctaag gaagtaaaaa
    34141 ttcacactaa attaacaaaa aatatcactt taaatatgcc tttaatctct gcggctatgg
    34201 atacagttac tgaacacagg gctgctatta tgatggcaag acttggaggg cttggagtga
    34261 ttcataaaaa catggatata gcctcacagg ttagagaagt aaaaagagtg aaaaaaagcg
    34321 aaagcggggt gattatcgat cctatttttg taagtcctaa ggcaagtgtt gcggaagctt
    34381 tagaaattat ggcagagtat agaatttcag gtgttcctgt agtagatgaa gataagaaac
    34441 taataggcat acttaccaat cgtgatttaa gatttgagag tgatttttca aatttggttg
    34501 aaaatgttat gactaaaatg cctttaatta ctgctccaaa gggttgtact ttagatgatg
    34561 cggaaaaaat tttcagcacc aacaaagtag aaaaacttcc tatagttgat gaacaaggac
    34621 gcttggaagg acttatcact ataaaagatc ttaaaaaacg caaagaatat cctgatgcca
    34681 ataaagataa ttttggcaga ttacgcgtgg gtgcggctat aggagtaggg caaatggatc
    34741 gtgtgaatgc tttagttgaa gcaggcgttg atgttgttgt gcttgattct gcgcatgggc
    34801 attctaaggg tattattgat acagtaaaag caattaaggc taaatatcca aatttagatc
    34861 ttatcgcagg aaatatcgcc actgcagctg cagcaaaagc actttgtgaa gcaggagtag
    34921 atgcggttaa agtaggtatt gggccaggaa gtatttgtac tacacgtatt gtttcaggtg
    34981 tgggcgtgcc tcaaatttca gccattgatg agtgcgtgga agaagcaaat aaatttggcg
    35041 ttcctgtgat agctgatggc gggattaaat attcaggtga tatcgcaaaa gctttagctg
    35101 taggtgcgag ttctgttatg ataggatcgc ttttagctgg aacggatgag agtccaggag
    35161 agctttttac ttatcaagga agacaatata agtcttatcg tggtatgggc tcacttgggg
    35221 ctatgcaaaa gggaagttcg gatagatatt ttcagcaagg tactgctcaa gataaactcg
    35281 ttcctgaagg tatagaaggg cgtgttcctt atgtgggaag tataagaagc gtggtgcatc
    35341 aacttttagg aggtttgcgt tcttctatgg gttatgttgg ggctaaagat atagaagatt
    35401 ttcaaaaaag agccgaattt gttgaaatta ccactgcagg gcttaaagaa agtcacgtgc
    35461 atgatgttac tatcactcat gaagcaccaa actacaaggt taatcatcaa tgagttttga
    35521 agaaaattta aaacacgcta atgaatcttt ggaaaaatta aataatcaag agcttgcctt
    35581 agatgaaagt gtaaaaattt ataaagaagg tttagagagt atcaaaaaag caagacttga
    35641 gcttgaaaaa gcaaaattag aagtggagca aatcgatgag taaaatagca gctttacagt
    35701 ttccaacttt agctttaagt gaatcaaggc ttgattatta tcttaaagct tcaaaagaca
    35761 atggagtaaa tttagtagtt ttgggagaat atgtgatcaa cagttttttt acagaacttt
    35821 tgcatatgcc aaaaaatatg ataaaagaac aaagcgaagc taaaaaagaa agcttgatta
    35881 aacttgctaa aaaatacgaa ttagaaatta tcgctcctta tgtaagcgtt gaagctaaaa
    35941 gttataaaaa actttgctta aaagttactc caaatggtgt gaaaagttat gaacagcaaa
    36001 ttttaatgcc ttatgaacat tggaatgaag aaaaattttt cagcaacaaa actccatcag
    36061 aattaaaaat ttttactttt aattatgaaa aattaaaatg tgctttgctt tttggttttg
    36121 agacacattt tgatattttt tggcaacaga ttatggcgaa aaaaattgat ttggttatcg
    36181 ttcctagtgc ttgtaccttt gaaagcaaac aaagatggga agaactttta aaaacaagag
    36241 cttttttaaa ttctacaagc attttaagag taaatcgcat aggcaaaaca aaagatgagt
    36301 ggaattttta cggcgatact ttgtttatta atgcttttgg tgagatagaa agtaaattag
    36361 gttctgaaga agaaatgctt attatagagc ctaaaaaaag tgatgaagca agaaaacttt
    36421 ggggttttga taaaattctt aagaattttt aaagaaggtg aatatgagaa aaattttact
    36481 tcaaattttt atttttagtg tattatttat agtaactttt accattaatc gtattttaat
    36541 gcaaaattct tttatcccta ctggtttaat tagtgataaa aatgaaatct ttttaatgta
    36601 tcttttaggt gtttttcatg atataagatt tttaagcgca gcgttt
//
LOCUS       DAPIWB010000008        33676 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.008, whole genome shotgun sequence.
ACCESSION   DAPIWB010000008 DAPIWB010000000
VERSION     DAPIWB010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 33676)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33676)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33676
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.008"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..509)
                     /locus_tag="RJ266_000326"
     CDS             complement(<1..509)
                     /locus_tag="RJ266_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354108.1"
                     /translation="MKILLLNENPVVSRLVSLSAKKMSYDFEELNAYSENLGNYDVIV
                     VDSDTPAPLKILKEKCDRLIFLAPRNQNVEDIDAQILQKPFLPTDFLNLLNNKDVNKH
                     TPIDLPMLSNDENPYADISLDLDNLNLDDLPDENSLDINSEGMEDLSFDDDAQDDNAN
                     KTLETQNLE"
     gene            complement(566..1333)
                     /gene="fliR"
                     /locus_tag="RJ266_000327"
     CDS             complement(566..1333)
                     /gene="fliR"
                     /locus_tag="RJ266_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliR"
                     /protein_id="HDV7354109.1"
                     /translation="MEFVNYLGDKNVVTFMLLLARMGGLIVFFPFFSHNSIPMVIKST
                     IVLFLTMYLYPLARLESLHLDSFFVLQLISEVIFGMIAGLMLQIIFAIIMMAGEQIAF
                     TMGFTMASILDPSSGTSMPITSQILNLLALMFFLAFDGHHLMLLFLSHSLGYISLGGF
                     YPHENLMHYLNMGMFNIFIIGFTMSFPILGISLLADVIFGLLMKTMPQFNLLVIGYPI
                     KIALGFVVLIAILLVMMQYFKNLILELFTHMQTLFFF"
     gene            complement(1320..1955)
                     /locus_tag="RJ266_000328"
     CDS             complement(1320..1955)
                     /locus_tag="RJ266_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7354110.1"
                     /translation="MELLRAENLSHSFDYPLFEGLNLTLNTKDCIAIQGSSGCGKSTL
                     LHILSSLLIPKKGEVFFKGSSLYQIDENERLKIRRYDFGIIFQTHYLFKGFSALENIE
                     LASVLSGQDLDEKILKRLGIDTLLHQKIGKLSGGQQQRVSIARVLCKKPKIIFADEAT
                     GNLDFDNAKNVIELLISYVKENDAALFFVTHDSKLASFCDKTYTINANGIC"
     gene            complement(1968..3041)
                     /locus_tag="RJ266_000329"
     CDS             complement(1968..3041)
                     /locus_tag="RJ266_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HDV7354111.1"
                     /translation="MAEITAAMVKELRESTGVGMMDCKNALSETNGDFDKAVQLLREK
                     GLGKAAKKADRLAAEGLVSVKVSDDFTSATVSEINSETDFVAKNDQFIALTKDTTAHI
                     QSNSLQSVEELHSSTINGVKFEEYLKSQIATIGENLVVRRFATLKAGANGVVNGYIHT
                     NGRVGVVIAAACDSAEVASKSRDLLRQICMHIAAMRPSYLSYEDLDMTFVENEYKALV
                     AELEKENEERRRLKDPNKPEHKIPQFASRKQLSDAILKEAEEKIKEELKAQGKPEKIW
                     DNIIPGKMNSFIADNSQLDSKLTLMGQFYVMDDKKTVEQVIAEKEKEFGGKIKIVEFI
                     CFEVGEGLEKKTEDFAAEVAAQL"
     gene            complement(3041..3832)
                     /gene="rpsB"
                     /locus_tag="RJ266_000330"
     CDS             complement(3041..3832)
                     /gene="rpsB"
                     /locus_tag="RJ266_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HDV7354112.1"
                     /translation="MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKT
                     LRYFRYTYNIVRDAAAEGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNF
                     GTIRQSIRKLEVIEKMEEDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIF
                     VIDTVKEKIAVQEANRLRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEA
                     INEGKALREQDGEALANEEKEITDEEKKEVLDEAISEEDFGEEQE"
     gene            complement(3948..5111)
                     /locus_tag="RJ266_000331"
     CDS             complement(3948..5111)
                     /locus_tag="RJ266_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDV7354113.1"
                     /translation="MLEKQMIKFILSKWNYGNFRIVFWDQEEFHVGNQPAKFSLIFKE
                     KIPFLKLFSDTSLVFAKHYMESKLEIEGDYDEIAKVLYYFSNKRFLKNTEDILSKIAQ
                     KQESKNIKSHYDIGNDFYKLWLDDTMSYSCAYFKEPNNTLYEAQINKIEHTLKKLDLK
                     EGEKLLDIGCGWGWLSIMAAQKYGVKVVGITISEEQCKKAKERVKELGLEDKIEIRLQ
                     NYQDLEFENYFDKVVSVGMFEHVGKENLGLYFMKVKQVLKPGGSMLLHSILAMFEGKT
                     NAWIDKYIFPGGYLPSLREVVSAMSEWDFHLLLAESLRMHYAKTLDLWDENFNEVLDK
                     VREKYDEEFIRMWDLYLRSCASAFRVGSVDLFQFLITKEINNNLSLTKDYIYK"
     gene            complement(5239..6363)
                     /locus_tag="RJ266_000332"
     CDS             complement(5239..6363)
                     /locus_tag="RJ266_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDV7354114.1"
                     /translation="MREIKIFLVVVVFTALVYWGVEPYAHSVMKPHVAPANFDFAVED
                     TTFAKGIVEAKELALKDAQASGDAKRIESANKELEKAKEELSKVETLWADVAKIDFAK
                     GDAKKGKEFFENNCFACHGVKEDGIAANITDSSMGVIPPDLSAAGAIFDEKFLAALIM
                     HPALALKVDHKFGDAFIMTAYNKDTSGESEEATNANIANVIAYLKDVSVKFEANEDAT
                     IKKDVEAKYAKMENSAQKAALMEKDIKFAKDKATFIEACGRCHDMKYDSFFTPSNQND
                     LKTYLGSVPPDLSMMIRSRGEQYLHDFINNTQKLLPGTAMPRVGLTEAAQAKVVSYID
                     QVGDSKKEERKTTGIYVMIFFVILSIFAIGWKRSVWSKLH"
     gene            complement(6360..7610)
                     /locus_tag="RJ266_000333"
     CDS             complement(6360..7610)
                     /locus_tag="RJ266_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HDV7354115.1"
                     /translation="MAQIRKANGLVDWLDQRLAVHKLLDVLMVKYWIPKQINFLWAMG
                     VILTTLFAVLFVTGLLLVMYYKPDTALAFDSVNKTIMQEVDYGWLWRHMHGVAASVVF
                     LIIYIHMLTGIYYGSYKKGREMIWVSGMLLFVVFSAEAFSGYMLPWGQMSYWAAQVIT
                     NLFGGIPFIGPELVIWIRGDYAVSDPTLTRFFMLHVCLLPIVIIAIIAFHFYSLRIPH
                     VNNEISEELDFDLEAEKYMAGDTKGSKVIPFWPGFLSKDFMYISFFMIFFFYLVCFKF
                     EFAMDPINFDPANALKTPAHIYPEWYFLWSYEVLRGFFFDIAGIKAFDIGLAAFGIAQ
                     VIFFLLPWLDRSDVVKPAHERPLFFIWFWILLIDLIVLTVYGKLPPTGVNAWVGFYAS
                     IVFLLLLIVVLPVITIMERKGAKQ"
     gene            complement(7612..8115)
                     /gene="petA"
                     /locus_tag="RJ266_000334"
     CDS             complement(7612..8115)
                     /gene="petA"
                     /locus_tag="RJ266_000334"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HDV7354116.1"
                     /translation="MATSESRRSFMGFAFGSVAAVGGVFSLVAMKKTWDPLPSVKAAG
                     FTTVDLSGMQDGELRTIEWRKKPIFILKKDASMPKDEKRDVVVDNAAYTVVIGLCTHL
                     GCIPAYQPSEQLFKCACHGGEFDTSGKNVFGPPPKPLEIPPFKIDGTKLVLGEEGPEY
                     KKMIAEA"
     gene            complement(8206..9492)
                     /locus_tag="RJ266_000335"
     CDS             complement(8206..9492)
                     /locus_tag="RJ266_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic transporter"
                     /protein_id="HDV7354117.1"
                     /translation="MLAFFIFLSTLVLLFWRPWNLPIWVFSSLGAFFVFIFQLVDFKD
                     ACFVFSLVWDSSLTLVGLIILSFSLEALGFFDFIASKILYFSREKNQEKIYISTKKMM
                     LFLLIFVFFLSAFFANDGAILIITPIIIALFSTLKDCKNHAFILSSFLLSLSFLCDAS
                     SNALVISNLTNIITANYFKIEFLEFAKNMFLPNFFVLLSTIVTVFVLYVRVLPKRLEF
                     KLIKKEQISLKLFFLCIVFLFLFVISFFIGEIFNIKISFFALLWAGIFWLIILKIQGK
                     KSIKILFEAPYGVLLFSFGLYMVVFALHKIGVSEILVKSYAFLMQDKSGIFGVALISA
                     FGSSVFNNLPMVLIGDLALKEYFENFSFDSLMIYAHLLGVNIGPKLTPIGSLATLLWL
                     GVLARKGINISFWQYCKFGFLITLPVLVFSLFALIV"
     gene            complement(9493..11352)
                     /gene="mnmG"
                     /locus_tag="RJ266_000336"
     CDS             complement(9493..11352)
                     /gene="mnmG"
                     /locus_tag="RJ266_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HDV7354118.1"
                     /translation="MFDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNP
                     AIGGLAKGHLVKELDAMGGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRII
                     TRNKLLKLPNLEISQEQASVLIVENDEVKGVKTNLENIYFAKKVILTTGTFLNGLIHV
                     GENKLQAGRVGELASVNLGNYLQTLGLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVN
                     PKAFSFRSRNFNPTQLPCYIARTNTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIED
                     KINRFSDKESHHLFIEPQTIDATEYYINGFSTSLPYEVQTQMLRSVEGFENAKITRFG
                     YAIEYDYIEPTELKHTLELKKIKNLYCAGQINGTTGYEEAAAQGFMAGINASLSIDMK
                     EPLILRRDEAYIGVLIDDLVVKGTKEPYRMFTSRAEFRLLLREENAILRLGKYGYDLG
                     LLSEQDFTYIQNIANNLQKGLEFLLSKEFTPNNQNNAFLESLGEDKISSIVNLQKIVA
                     RASFDIEKLKKLDPIFETMDHYSLREILNEAKYYHYISMQKAQVEKMKNLSELKIPEN
                     FDFKSVSGLSNEVVEKLNHYKPPTIFAASQISGITPAALDILQIYIKMQKKKA"
     gene            complement(11440..11937)
                     /gene="cetB"
                     /locus_tag="RJ266_000337"
     CDS             complement(11440..11937)
                     /gene="cetB"
                     /locus_tag="RJ266_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bipartate energy taxis response protein CetB"
                     /protein_id="HDV7354119.1"
                     /translation="MSREIFLQEDSLITSKTDLKGKIVYANDDFLKYAGYTMGEVLNK
                     PHNIVRHEEMPKTVFKYLWDYMKEGKEIFAYVKNKTKDNNYYWVFANVTPSIDVNNNI
                     IGYYSVRRMPNKSAISTIESLYSDLLRAEQQQGLNKGVEMLKNLCKDADKTYNELIFS
                     LQEAK"
     gene            complement(11955..13334)
                     /gene="cetA"
                     /locus_tag="RJ266_000338"
     CDS             complement(11955..13334)
                     /gene="cetA"
                     /locus_tag="RJ266_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bipartate energy taxis response protein CetA"
                     /protein_id="HDV7354120.1"
                     /translation="MVKNGLLLTIFLSVIGVLGVIFIHIFVGAIIFVLIAVLMIYLLR
                     QHKDEQIMIDKLLVLCRELKEGNFDNRIIYVKTKSKKLAEIADNLNNTIDGLEAYLRE
                     INTSISCSQKGEFYRKALPEGLKGIFAHNIEFINKALANIEVTARSTFKNALSRTLMD
                     LSLGNQNKDMSQISSSLNQDISMMKNVYDTVDAISHTATENGSEVDSLQSAMGSLMDV
                     VNSSKETVQTFVANSQNITSVVEVIRDIADQTNLLALNAAIEAARAGEHGRGFAVVAD
                     EVRKLAERTQRSTSEISIAIQTMQQDFVNIQSGSEQVFNIVSESEERINKFSQAFKRL
                     EENSSALGVNFGSFAKRLILSVVKIDHILYKSNIYLNLNGAQNFNLESVDPISNLCQD
                     ERAQGVINELSSETELNLAKEFIKDNAKKAIEESSQDYIDQKAYDAIVNDIKSLEQRS
                     AEILAKLKI"
     gene            complement(13456..13950)
                     /gene="cetC"
                     /locus_tag="RJ266_000339"
     CDS             complement(13456..13950)
                     /gene="cetC"
                     /locus_tag="RJ266_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy taxis response protein CetC"
                     /protein_id="HDV7354121.1"
                     /translation="MKEIVLSENALITSKTDLKGNIIYANNDFLKYAGYKVDELLYKS
                     HNIVRHEDMPRTVFKCLWDYIQKGDEIFAFVKNKAKDGNFYWVFANVSASFDTNGNII
                     NYYSVRRAPNRKSLSIIEEVYKILLEKEQKSGINAGVSALMDIVSSYKMTYNELIFNL
                     QENN"
     gene            14219..15595
                     /locus_tag="RJ266_000340"
     CDS             14219..15595
                     /locus_tag="RJ266_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HDV7354122.1"
                     /translation="METLSQTLAERKPPLYKRIIKSLGFWVIIGIIAGIVLGYIDKEL
                     AIASKPGVDYFIGALKVLIGPIIFVTLVLGIISLESLKKVGSIGAKAVIYFEVVSTLA
                     LAIGIFMANVMQPGHGMNLNPSQLDTKSVQKYISQTTEVSASSEIMHILKDAMPTDII
                     TPFTEGKTIQVLVIAIITALIISLMRTEDKQAIQRVFEVVQNFVFKILQIIMYFSPIA
                     AFSAMAVLIAQYGIGSLINLAYLLLVMLISCLVFIFGILGLICYFAKVNIFKFMRFIS
                     REVLIVFATSSSESALAPLMRKLEKAGLSKATVGLVLPTGYSFNLDCTNIYLAMSLIF
                     LAQAFNVNLSLAHEISILIVLMIASKGAVGVTGSGFIVLGSTLAALGNMEISEANATL
                     AQVLPVAAIGVLLGVDKFMSEMKAVGNLCGNSVAALIVAIWDKQIDWEKFRYAMDNPE
                     KFHNAGMN"
     gene            complement(15592..16398)
                     /locus_tag="RJ266_000341"
     CDS             complement(15592..16398)
                     /locus_tag="RJ266_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter beta-barrel
                     domain-containing protein"
                     /protein_id="HDV7354123.1"
                     /translation="MRGIFYIIALFSLLNGDELTEALAKNNNQNSWEHFDYKNTKEAP
                     KIQEENVDFKSTFDSLLSKTLENNNGIDKTDGNLDFQNENVQVKNLSSLYEGENNSLL
                     FQKELFVAQNNYNYSGGLINRYEKDDFLFGVNGFIDKQKEQKDTKSFGTEFGYSKFIK
                     AYSNYYIPNEAEKNLQLGMSFVIPTYTAFAFDISKDNDKTNYQVSYSPYSVFSLNLLR
                     RDYSARETVDDTVVQVGFSFNFNESFLKQFRKKDNTLEEVNRYDFLQRTH"
     gene            16540..18066
                     /locus_tag="RJ266_000342"
     CDS             16540..18066
                     /locus_tag="RJ266_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HDV7354124.1"
                     /translation="MQKDNLIAFVIFIISTIAFVIWGFGYISQHQLILFILASIFGIF
                     MAFNIGGNDVANSFGTSVGAKTVTIKQALIIAAVFELSGAIFAGAEVTKTIRSGIVIF
                     PNSLDPMLFVIIMLAALLSSGVWIFIATKKGLPVSTTHSIVGGIVGASIMMGLLKFDG
                     IQTLSMVKWSEILRIAISWVASPLLGGIVAYIIYSYIDKKILKPSEKLNDDLKNIKKE
                     RKKFKEEYFLNLKTKSQEEQIKELSAIALDEEEQENNFYRNKMKEFKDQEKDIDIYSI
                     LKTHMPIIACIAAAIISAMFLFKGLNNVSTLDILQNFWIIGIIGTISYVITFAIVKIV
                     KKTELNKTTDRIFSWFQIFTASSFAFSHGANDIANAIGPFAAILDVLKNGTINATSPV
                     PFAALAMFGVALVVGLWFLGKEVITTVGSKLATIRPTTGFSAELGASIVILLATQFGI
                     PVSSTHILIGAILGIGVYNKNANWIMMKPIGLAWIITLPAAGIMAALVFLGFKLSLGI
                     "
     gene            complement(18074..19252)
                     /locus_tag="RJ266_000343"
     CDS             complement(18074..19252)
                     /locus_tag="RJ266_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDV7354125.1"
                     /translation="MIIKNAKIYGDSLQDIEIKEGKITNIDSNLQGEEILDAKGMTLL
                     PSFVDLCVSLKNDKFSLANLELLENECLKGGISSIVLRDCMDFDEESFALFLQNLAQR
                     KMQIFSSVRVKDTNGKLKNLATLLNKGACALELDSSLDANTLKVSSQYAFMKDSPIFV
                     RCYDKDFDDNGVMNDCEMSFELGLIGMSKIAETSQIAKMKELAKFYKNKVIFDLLSLK
                     DSLVLLDEKDLKLVSIHHLIKDDSACEDFNTAAKLMPPLRSKEDVLALREALKEGKIS
                     FLTSLHSAKSISLKDLAFDEAAFGIHSVCEFISLCYTFLIKEGFLNWQELCQFTSKNP
                     SEFLGLNSGVIEVGKEANLVLFDENEEIFAPKSSLYSEDKLFGKIKMHIIKGKNILEK
                     "
     gene            complement(19262..20158)
                     /locus_tag="RJ266_000344"
     CDS             complement(19262..20158)
                     /locus_tag="RJ266_000344"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HDV7354126.1"
                     /translation="MMRIAVIGAGKWGSALHLALKENHNCFISSLHQRDLEDFVSIKE
                     ALECEYLVFALSSQGMRAWLKENFINKGQKILIASKGIEDQSCQFLDEIFLDFVPKEN
                     FCVLSGPSFAAEVMQKLPTALMISGINQELCKKFASFFPDFIKTYIDNDVRGAEICGA
                     YKNVLAIASGISDGLKLGNNARAALISRGLIEMHRFGKFFGTKEETFLGLSGAGDLFL
                     TATSVLSRNYRVGLKLAQNQKLDSILAELNEVAEGVKTAYAIEKLAKMKGIYTPIVNE
                     VVAIFKGKSVQEATQNLLKQND"
     gene            complement(20155..21573)
                     /gene="gatB"
                     /locus_tag="RJ266_000345"
     CDS             complement(20155..21573)
                     /gene="gatB"
                     /locus_tag="RJ266_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HDV7354127.1"
                     /translation="MFEVVIGLEVHTQLNTKTKIFCSCATSFGEAPNTNVCPTCLALP
                     GALPVLNEEAVKKAIAFGKAVNATINKKSVFNRKNYFYPDLPKAYQISQFDIPIVEKG
                     ELFINVKGENKRIGITRAHLEEDAGKNIHENNFSKVDLNRAGTPLLEIVSEPELRSSD
                     EAVAYLKKLHSIIRFLDISDANMQEGSFRCDANVSIRPKGDTKLYTRVEIKNLNSFRF
                     IQKAIEYEVKRQSEAWEDGTYEQEVVQETRLFDTTNLVTRSMRGKEEAAEYRYFPDPD
                     LLPVLLKDEFLDIKIPELPDEKKARFIDELGIKESDAEVLISSLEMSRFFESLISQNL
                     NPKLCVNWLNTELMGLLKGELTIENSLVDAQKLGVLIKRIEDGTISAKAAKDVLAFVF
                     ENTSVEIDEAIEKLGLKQVSDDSAIEAVIEQILNANADKVAEYKSGKEKLFGFFVGQT
                     MKEGKGAFNPAKVNEILKTKLG"
     gene            21688..22182
                     /gene="luxS"
                     /locus_tag="RJ266_000346"
     CDS             21688..22182
                     /gene="luxS"
                     /locus_tag="RJ266_000346"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HDV7354128.1"
                     /translation="MPLLDSFKVDHTKMPAPAVRLAKVMKTPKGDDISVFDLRFCIPN
                     KDIMSEKGTHTLEHLFAGFMRDHLNSNSVEIIDISPMGCRTGFYMSLIGTPDEKSVAK
                     AWEEAMKDVLSVSDQSKIPELNIYQCGTCAMHSLDEAKQIAQKVLNLGISIMNNKELK
                     LENA"
     gene            22493..23485
                     /locus_tag="RJ266_000347"
     CDS             22493..23485
                     /locus_tag="RJ266_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopenicillin N synthase family oxygenase"
                     /protein_id="HDV7354129.1"
                     /translation="MNLPILDLQAYEKDKSTFLKNLREIASKIGFFYLINTSIDKNLN
                     EKLFKLGKEFFNLSRSSKELISMVHSPQFRGYTSEGFEYTAGTKDYREQLDIGTERDA
                     LNWNLNSPLWQRLEGPNLWPSEIPELKKTFLTWHKQTKKACLKLLKTFAQALDLPSNA
                     FDKLYGENSYEHCKIIHYPKSSKNITQGVGSHKDGGLITFVFQEKQSGLEAFIDGKWL
                     SIPPLENSVVVNIGEFLELATNGYLKATIHRVNLSPKERFSIAYFLGVQLDKDIPIFK
                     LNPELAKESKGVDTDPKNPLLRNVASNYFKRMIRSHPDVASIYHSDLIEKFSFA"
     gene            23496..24266
                     /locus_tag="RJ266_000348"
     CDS             23496..24266
                     /locus_tag="RJ266_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDV7354130.1"
                     /translation="MTLFTKAFCVATLFTGFAWANEELKVGSSITPHADILRFIKSAL
                     QKQGYDLKIYEFNDGVIPNVMVENGELDANYFQHEPYLKEFNQRQGTHLVKVASIHIE
                     PMAVYSKKYKEFNPEEGQSISIPNNPTNESRALRIVASKGLIEVKDNELITPLDITKN
                     PKKLKFVELKDAQLTRSLNDVDYSLINSNFAILAGLNPVKDGLYTESKYSEYGNIIAV
                     KEGNENLPKIKALVKALQSDEVKKFIEEKYQGALIPTF"
     gene            24278..26542
                     /gene="metE"
                     /locus_tag="RJ266_000349"
     CDS             24278..26542
                     /gene="metE"
                     /locus_tag="RJ266_000349"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HDV7354131.1"
                     /translation="MKNSIISYPRIGANRELKFAIEKYFKNQSSKEELLKSAKDLRIR
                     HWQEIQKAGIDFIPSNDFSLYDNVLDAAVLFNIVHTKYKNLNLDALDEYFAQSRGYQG
                     ENGDVTALAMKKWFNTNYHYLVPECDNADIIALTGDKIFKEYLEAKELGIESKPVLIG
                     IFTLFKLIAFKDEKTQKLAKEKLLNAYIELFDKLNELKVTWLELDEPYLVYDLSKEDI
                     ALFEEFYQELLNHKKDLKILLQSYFGDLRDIYPKLLESKFDALGLDFIEGKQSLALVQ
                     KYGFAKDKILFAGLINGKNIYANDYAKSLKLVKELQKYTQNIVLNTSCSLLHVPYSTE
                     FESKLDPSYLKLFAFAKEKLQELKDLKEILNSSEENSLFRANQELFKNIPERLDEKVK
                     ARLKALKKEDFTRTPSFKERALIQKEFLKLPLLPTTTIGSFPQSADVRSNRLAFKQEK
                     ISAQNYTEFNQQKIKECIQIQEEIGLDVLVHGEFERNDMVEYFGENLKGFLFTQNGWV
                     QSYGTRCVKPPVIWGDVSRTKPITLAWSKFAQSLSQKIVKGMLTGPVTILNWSFPRED
                     ISLKESTEQIALAIRDEVLDLENAGIKIIQIDEAALREKLPLRKSDWHSEYLDWAIPA
                     FNLVHSGVKAKTQIHTHMCYSEFSDILKEIDAMDADVISFEASRSNLSLLDTLKAVHF
                     KTEVGPGVYDIHSPRVPSVEELSLTIEKILNKLPKEQIWINPDCGLKTRAYEEVIASL
                     KNLVTATQKIREQL"
     gene            26552..27400
                     /gene="metF"
                     /locus_tag="RJ266_000350"
     CDS             26552..27400
                     /gene="metF"
                     /locus_tag="RJ266_000350"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HDV7354132.1"
                     /translation="MCSFSFEVFPPRKDENIKNLHAILDDLGQLSPNFISVTFGAAGS
                     INSQNTLEVASLIQEEYQIPSIVHLPCIHSSKEKITQILQKCKEKNLNQILALRGDIC
                     ENLEKSKDFSYASDLISFIKKQEYFEIYAACYPEKHNESKNFIEDIHHLKTKVNAGTD
                     KLITQLFYDNEDFYTFKQNCALAGIDIPIYAGIMPITNKRQVLKISQLCGAKIPPKFV
                     KILEKYENNALALEDAGIAYACDQIVDLITSGVDGIHLYTMNKSKAAIKIYEAVKHLL
                     KEELHV"
     gene            complement(27422..27613)
                     /locus_tag="RJ266_000351"
     CDS             complement(27422..27613)
                     /locus_tag="RJ266_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354133.1"
                     /translation="MIYILEFFKGASLALMLFGALFFFFKYNSFFYLCLGIIPGLLLS
                     LIFVLLIENHKLKNENKLR"
     gene            complement(27610..28290)
                     /locus_tag="RJ266_000352"
     CDS             complement(27610..28290)
                     /locus_tag="RJ266_000352"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HDV7354134.1"
                     /translation="MKDLFLFSSLLDASHTFSYFFHIGLVALIAVIVAMMATRSMQLV
                     PRGMQNLGEAFLEGVLSMGRDTMGSEKGARKYLPLVATLGIIVFFSNIIGIIPGFHSP
                     TASLNLTLSLAIIVFVYYHFEGIRAQGFVKYFAHFMGPIKLLAPLMFPIEIVSHLSRV
                     VSLSFRLFGNIKGDDLFLMVILALVPYIAPLPAYVLLTFMAFLQAFIFMILTYVYLAG
                     ATVVEEGH"
     gene            complement(28359..29699)
                     /gene="radA"
                     /locus_tag="RJ266_000353"
     CDS             complement(28359..29699)
                     /gene="radA"
                     /locus_tag="RJ266_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HDV7354135.1"
                     /translation="MAKNKALFECQACGNQQSKWLGKCPDCGAWDSFVELKAEQIKVL
                     KELAQVSMKTSEAVCIEDVELEHFTRYSTDDNELDLVLGGGLVEGSLVLIGGSPGVGK
                     STLLLKIASNLAKQGKKVLYVSGEESKAQIKLRADRLEANTPNLFLLTELCLENILEE
                     LHKKDYSILIVDSIQTLYSNKITSAAGSITQVREITFELMRVSKAYNISTFIIGHITK
                     EGAIAGPRVLEHMVDVVLYFEGDATKEIRLLRGFKNRFGGTNEVGIFEMTAKGLISAK
                     DLANRFFTRGKAISGSALGVVMEGSRALVLEVQALVCESSYPKRSATGYEKNRLDMLL
                     ALLERKLEIPLGHYDVFVNISGGVKVSETAADLAVVAAIISSFKNRPLSKDSIFIGEL
                     SLNGEIREVFSLDMRLKEAKMQKFKNAIVPSKPLEDIGLKCFVAKELSQVLEWM"
     gene            complement(29699..30565)
                     /gene="ftsY"
                     /locus_tag="RJ266_000354"
     CDS             complement(29699..30565)
                     /gene="ftsY"
                     /locus_tag="RJ266_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HDV7354136.1"
                     /translation="MFNFFKKGLAKTLENIVGVKGENKKITKDLLEEILLEADVSYEI
                     VEEIIYYLPPQNEVKKEDLKRVMGSYFLYEKKETNQEKPFVELILGVNGAGKTTSIAK
                     LAYLYKNQNQKVILGACDTFRAGAIEQLKLWAQKVDVDIVLTAQGHDPSAVAFDTISK
                     AKAKDFDRVIIDTAGRLQNQKNLAHELEKIVRISNKALEGAPHRKILVLDGTQGNAGI
                     LQAKAFNELVKLDGVIITKLDGTAKGGALFSIARELELPIFYVGVGEQMTDLQEFNAS
                     AYLDTLLDPIFE"
     gene            complement(30565..31122)
                     /locus_tag="RJ266_000355"
     CDS             complement(30565..31122)
                     /locus_tag="RJ266_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDV7354137.1"
                     /translation="MKIKKILLLVAISCLFVACSNDKEKQQNDVNLSTEASINQSDDM
                     NFKLNLIDGGSISVKKENAVLNFNDEDKVTLFVFFTTWCTPCIAEIPHLNKLQEKYNN
                     DFNIVGVLLEDKSNDEIQKFIEQHKISYKVANGENNYLLAKALGGVNGIPTMFLYNKH
                     SKLINQYLGLIPEEMLEIDIQKAIL"
     gene            31205..31831
                     /locus_tag="RJ266_000356"
     CDS             31205..31831
                     /locus_tag="RJ266_000356"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HDV7354138.1"
                     /translation="MEKTDFRALQKIRLFKHSKLNFKQDYKIFKECLKIIKLFKAKNI
                     LIFIPLHYEPNLIKFRHILNKNYKLFVPFMQDKSLKIVKLRLPFIKKRFGVLEPIDSF
                     FKAKIDLAIVPVIGVDKNLKRIGHGQGFYDRFFENLNYKPHIIFIQSIDALSQNNLTQ
                     KHDISGKLYINPYKKYYKKERKNDRITYRTYSRYSRTRYRIFSCKKNQ"
     gene            31752..33305
                     /gene="rny"
                     /locus_tag="RJ266_000357"
     CDS             31752..33305
                     /gene="rny"
                     /locus_tag="RJ266_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HDV7354139.1"
                     /translation="MIESLIALIAAIVGLGIGYLVAKKINDAKYEIFVEQAKAKAKAI
                     EYEAELILKDAKNSILNAELEVKKKYEEKTHKFQKDFNQKFDDLSKKEQKLQQEEEKL
                     KEDKEYLCKSQKHIQNLQSDVDKLKNKYQEKLDDVLKILEHSTGLTQNEAKEIILKKV
                     EENSREQIAHIVRKYEEEAKNEAKRKANFIIAQATSRFAGEFAAERLINVINIKNDEL
                     KGRIIGKEGRNVKTLEMVLGVDIIIDDTPGAIIVSCFNLYRRAIATKVIELLVEDGRI
                     QPARIEEIHEKVCKEFDSAILEEGETIVMDLGLNKIHPEIVKLIGKLKYRASYGQNAL
                     AHSLEVAHLAGIIAAECGGDENLARRAGILHDIGKALTHDFEGSHVDLGAELCKRYKE
                     HPVVINAIYAHHGHEEATSIESAAVCAADTLSAARPGARREVLEAFLKRVSELEDIAK
                     SKEGIKNAYAINAGREIRVIANAQLVNDDESVLLAKEIAAEIQEKMQYPGEIKVNVIR
                     ELRAVEYAK"
     gene            33314..>33676
                     /locus_tag="RJ266_000358"
     CDS             33314..>33676
                     /locus_tag="RJ266_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDV7354140.1"
                     /translation="MQDMIDTLIKYGYIVLFFYSLGGGMVGILAAGVLSSQGKMDLSF
                     CIALAFIANTIGSTLLFILGKYYKKDIMPYFKKHRRKIALAMIKTKQHGIILLVTQKF
                     IYGLKTFIPIAAGMAKYNF"
BASE COUNT        11920 a         5883 c         4599 g        11274 t
ORIGIN      
        1 tgttctaaat tttgagtttc taaagttttg tttgcattat catcttgagc atcatcatca
       61 aaactcaaat cttccattcc ctctgaattt atatctaaag aattttcatc aggcaaatca
      121 tctaaattta aattatctaa atccaagctt atatcagcat aaggattttc atcattgctt
      181 aacattggca aatcaatagg cgtatgtttg tttacatctt tattattcag taaatttaaa
      241 aaatctgtag gtaaaaaagg tttttgtaaa atttgcgcat ctatatcttc tacattttga
      301 tttcgcggag ctaaaaaaat caatctatca catttttctt taagaatttt taaaggtgct
      361 ggagtatcgc tatctacaac aatcacatca taattaccca aattttcact ataagcatta
      421 agttcttcaa aatcataaga cattttttta gcactaaggc ttacaagtct tgaaaccaca
      481 gggttttcat ttaaaagtaa aattttcatc actttaatcc ttaaaaaata attgctattt
      541 tacgataatt tcatttatcc tttccttaga agaaaaaaag agtttgcata tgagtaaaaa
      601 gttctaaaat taaattttta aaatattgca tcataactag taaaatagca atcaaaacta
      661 caaaacctag agctatcttt ataggatagc caataactaa aagattaaat tgtggcattg
      721 ttttcatcaa aagtccaaaa ataacatcgg ctaaaagtga aattccaagt ataggaaagc
      781 tcatagtaaa acctatgatg aaaatattaa acatacccat atttaaataa tgcattaaat
      841 tctcatgcgg ataaaatcca cctaaactaa tataacccaa agaatgactt aaaaacaaaa
      901 gcattaaatg atggccatca aaagcaagaa aaaacatcaa agcaagtaaa tttaaaattt
      961 gagatgtgat aggcatactc gttccagaac ttggatctaa tatacttgcc atagtaaatc
     1021 ccatagtaaa agcaatctgc tcacctgcca tcataataat agcaaaaata atttgaagca
     1081 ttaatcctgc tatcattcca aaaatcactt cactaataag ctgtaaaaca aaaaaactat
     1141 ctaaatgcaa agattctaat ctagccaaag gatataaata catagtcaaa aataaaacta
     1201 tagtactttt tatcaccata ggaatagaat tatgtgaaaa aaaaggaaaa aaaactataa
     1261 gaccacccat tctagcaaga agcaacataa aagttacaac atttttatca cctaaataat
     1321 taacaaattc cattggcgtt tatagtataa gttttatcac aaaaacttgc aagcttgcta
     1381 tcgtgagtta caaaaaataa agctgcatca ttttctttaa cataggaaat taaaagctcg
     1441 ataacatttt tagcattatc aaaatccaaa tttccagttg cttcatcagc aaaaataatc
     1501 tttggttttt tacaaagcac acgtgcgata ctcacacgct gttgttgtcc gccgctaagc
     1561 tttcctattt tttgatgtaa aagcgtatca atacctaacc tttttaaaat tttctcatct
     1621 aaatcttgac ccgataaaac actagcaagt tcgatatttt ctaaagccga aaaaccttta
     1681 aaaagataat gtgtctgaaa aataatacca aaatcataac ggcgaatttt taatctttcg
     1741 ttttcatcta tctgataaag actagaacct ttaaaaaaaa cttcaccttt ttttggaatc
     1801 aataaagaag aaagtatatg caaaagagta gatttaccac aaccgctact cccttgaata
     1861 gcaatgcaat ctttggtatt taaagtaaga tttaaaccct caaaaagcgg ataatcaaaa
     1921 ctatggctta aattttccgc tcttaagagt tccattttta accgttttta aagttgtgca
     1981 gcaacttcag ccgcaaaatc ttcagttttc ttttctaaac cttcgccaac ttcaaagcaa
     2041 ataaattcaa caattttaat ttttccgcca aattcttttt ctttttcagc aattacttgt
     2101 tctacagttt ttttatcatc cattacataa aactgaccca ttaaagtaag tttgctatcg
     2161 agttgagaat tatcagctat aaaactattc attttgcccg ggataatatt gtcccaaatt
     2221 ttttcaggtt taccttgagc tttaagttct tctttgattt tttcttcagc ttcttttaaa
     2281 attgcatcgc ttaattgttt gcgacttgca aattgaggaa ttttatgttc aggtttattt
     2341 ggatctttaa gtctacgtct ttcttcattt tctttttcaa gttcagcaac caaggctttg
     2401 tattcatttt caacaaaagt catatccaaa tcttcataac ttaaataact tggtctcatt
     2461 gctgcaatat gcatacaaat ttgtcttaat aaatctcttg attttgaagc tacttcagca
     2521 ctatcacaag ctgcagcgat cacaacacca acacggccat ttgtatgaat ataaccattt
     2581 acaacgccgt tagcacctgc ttttaaagtt gcaaatcttc ttacaactaa gttttctcct
     2641 atagttgcaa tttgactttt taaatattct tcaaatttta caccattaat cgtacttgag
     2701 tgaagctctt ccacactttg caagctattg ctttgaatat gagctgtagt atcttttgtt
     2761 aaagcgataa actgatcatt ttttgccaca aaatctgttt cggaattaat ctcacttaca
     2821 gttgcgcttg taaaatcatc acttactttt acacttacta aaccttcggc agcaagtcta
     2881 tctgcttttt tagcagcctt acctaaacct ttttctctta aaagttgtac tgctttatca
     2941 aaatctccat tagtttcact caaagcattt ttacaatcca tcatccccac gcctgtactt
     3001 tcgcggagtt cttttaccat tgcagcagta atttcagcca ttattcttgc tcctcaccaa
     3061 agtcttcttc gcttatcgct tcatctaaaa cttctttttt ctcttcatcg gtgatttctt
     3121 tttcttcatt tgctaaagct tcgccatctt gttctcttaa agcttttcct tcattaatcg
     3181 cttcagccat ttcttggcag aaaagttgca ctgaacgaat tgcatcatca tttcctggaa
     3241 taggataagt taccaagtca ggatcgcagt ttgtatctag tggagctaca acaggaattc
     3301 ttaatctatt tgcttcttga acagcaattt tttcttttac tgtgtcaata acaaaaatca
     3361 tatcaggttg agttttcata taacgaattc cacctaaata agctaataat ttttcttttt
     3421 ttcttgtaag cattaaagct tcttttttag ttaaaagttt aatacttcca tcttcttcca
     3481 ttttttcaat tacttctaat tttctaattg attggcgaat ggtaccaaaa tttgtcatca
     3541 taccgccaag ccatctatga tttacataag gcataccgca tttttcagcg tattctttaa
     3601 tcgctccacc tgcttgtttt tttgtcccga caaaaagtat agtttttcct tcggcagcag
     3661 cgtcacgaac gatattatag gtatatctaa aatatcttaa agttttttgt aaatcaatta
     3721 cataaatacc ttttctctcg ccaaaaatga attttttcat ctttggattc cagcgtcttg
     3781 tttggtgtcc aaaatgcaca ccgcattcta ataaatctct catactaacc atgagtttct
     3841 ccttataaat ttagctttat tcctccacat cccttaattt acacaagcta aaaaggattg
     3901 atgcgtgtga aatgaagcta agattttatc aaatttaagt ttagttttta cttatatatg
     3961 tagtccttgg taagacttag attattattg atttcttttg tgattaaaaa ttgaaacaaa
     4021 tccacgcttc caacacgaaa agcagaggca caagaacgaa ggtacaaatc ccacattctt
     4081 ataaattctt catcatattt ttcccttacc ttgtccaata cttcgttaaa attttcatcc
     4141 cataaatcta aagtttttgc atagtgcatt cttaaacttt ctgctaaaag aagatgaaaa
     4201 tcccactcac tcatagcact tacaacctct cttaaagaag gtaaatatcc tcctggaaaa
     4261 atatatttat ctatccaagc atttgttttt ccttcaaaca tggctaaaat agaatgtaaa
     4321 agcatagaac ctccaggttt taacacttgt tttactttca tgaaataaag tcctaaattc
     4381 tctttgccta catgttcaaa catacccaca gaaacaactt tatcaaaata attttcaaat
     4441 tctaaatctt gataattttg aagtcttatt tctattttat cttcaagacc aagttctttt
     4501 actctttcct tagctttttt acactgctcc tctgaaatag taattccaac aaccttaact
     4561 ccatactttt gagccgccat aatagaaagc caaccccagc cacaacctat atctaaaagc
     4621 ttttctcctt cttttaaatc aagtttttta agagtatgtt ctattttgtt aatttgagct
     4681 tcataaagag tattattagg ctctttaaaa taagcgcaag aatagctcat agtatcatca
     4741 agccaaagct tataaaaatc attacctata tcataatgac ttttgatatt tttactttcc
     4801 tgtttttggg ctattttact caagatatcc tctgtatttt ttaaaaaacg cttatttgaa
     4861 aaataataca aaactttagc tatttcatca taatcacctt ctatttctag tttagactcc
     4921 atataatgtt ttgcaaaaac taaactcgta tcactaaata attttaaaaa aggtattttt
     4981 tctttgaaaa ttaaagaaaa tttagcaggc tgattaccca catgaaattc ttcttgatcc
     5041 caaaatacaa ttctaaaatt tccataattc cattttgaaa gaataaattt aatcatttgt
     5101 ttttcaagca tgacatactc caactaataa aaattattat ttgatagtat ctcttaatta
     5161 tgtttaaaat ttgataaaat tgaagaaaag atagaatttt tgccacagat ataaaatagt
     5221 ggcaaaaatt ttataatact aatgtaattt agaccaaaca gaacgcttcc aacctatagc
     5281 aaaaatactt aaaattacaa agaatatcat tacataaatt cctgtagttt ttctttcttc
     5341 ttttttgcta tcacccactt gatcaatata agatacaacc ttagcctgtg cagcttctgt
     5401 taaacctact cttggcatag cggttcctgg aagaagtttt tgagtattat taataaaatc
     5461 atgtaaatat tgctcaccac gagatcttat catcatagaa agatcaggtg gaacagaacc
     5521 taaataagtt tttaaatcat tttgatttga tggagtaaaa aagctatcgt atttcatatc
     5581 atgacaacgt ccgcaagcct caataaaagt tgctttatct ttagcaaatt ttatatcttt
     5641 ttccattaaa gctgcttttt gagcactatt ttccatttta gcatattttg cctcaacatc
     5701 tttcttaata gtagcatctt cattggcttc aaatttaaca ctcacatctt taagataagc
     5761 aattacattg gctatatttg catttgtagc ttcttcactt tctcctgaag tatctttatt
     5821 gtaagctgtc ataataaaag catcaccaaa tttatgatct acttttaaag caagcgcagg
     5881 atgcataatc aaagctgcta aaaatttttc atcaaaaata gcaccagctg cactgagatc
     5941 aggcggtatt actcccatag aagaatcagt aatattagct gctattccat cttcttttac
     6001 accatgacat gcaaaacagt tattttcaaa aaattcttta cctttttttg catcaccctt
     6061 agcaaaatcg atctttgcaa catctgccca aagtgtttca accttgctta attcttcttt
     6121 tgctttttca agttctttgt ttgcactctc tattctttta gcatctcctg aagcttgtgc
     6181 atcttttaga gctaattctt tagcttcaac tatacctttt gcaaaagtag tatcttcaac
     6241 agcaaaatca aaatttgcag gagcaacatg aggcttcatc actgaatgag cataaggctc
     6301 taccccccaa tatacaagtg cagtaaaaac tactacaact aaaaatattt ttatttctct
     6361 cattgtttag ctccttttct ctccataata gtaataaccg gtaaaactac aataagtaaa
     6421 agtaaaaata ctatagaagc gtaaaatcct acccaagcat ttacacctgt tggaggtaat
     6481 tttccataaa ctgttaaaac aattaaatcg ataagcaata tccaaaacca aatgaaaaat
     6541 aaaggtcttt catgagctgg ttttaccaca tcacttctat caagccaagg aagcaagaag
     6601 aaaatcactt gagcaatacc aaatgcagcc aaacctatat caaaagcttt aatacctgca
     6661 atatcaaaga aaaatcctct taaaacttca taactccata agaaatacca ctcaggataa
     6721 atatgagctg gtgttttaag cgcattagct ggatcaaaat taattggatc cattgcaaat
     6781 tcaaatttaa aacagaccaa ataaaagaag aaaatcataa aaaagcttat atacataaaa
     6841 tcttttgata aaaatcctgg ccaaaaagga atcactttag aaccctttgt gtcacctgcc
     6901 atgtattttt cagcctctaa atcaaagtca agttcttcag aaatttcatt attaacatga
     6961 ggaattctta aagaatagaa gtgaaatgct ataatagcaa tgataactat aggaagcaag
     7021 cacacatgaa gcataaaaaa tcttgttaaa gttggatcag aaaccgcata atctccacga
     7081 atccaaatca caagctcagg gccaataaat ggtatccctc caaaaagatt agtgattact
     7141 tgagctgccc aataactcat ttgtccccaa ggaagcatat acccactaaa agcttcagca
     7201 gaaaatacaa caaacaaaag cataccgcta acccaaatca tctcacgacc ttttttataa
     7261 gaaccgtaat aaattcctgt tagcatatgt atgtatataa tcaaaaatac aacagaagcg
     7321 gcaacaccat gcatgtgacg ccaaagccat ccatagtcca cctcttgcat aatagtctta
     7381 ttcacactat caaaagcaag tgcagtatct ggtttataat acatcacaag taaaagtcct
     7441 gtaacaaaaa gcactgcaaa aagagtggtt aaaataaccc ccattgccca aagaaagtta
     7501 atttgctttg gtatccaata ctttaccatt aaaacatcaa gcagtttatg taccgcaagt
     7561 ctttgatcaa gccaatctac aagaccatta gcttttctaa tttgtgccat cttaagcctc
     7621 cgctatcatt tttttatatt caggaccctc ttcacctaaa acaagcttgg ttccatcaat
     7681 tttaaaagga ggaatttcaa gaggctttgg aggaggtcca aagacatttt ttccacttgt
     7741 gtcaaattct ccaccatgac aggcgcattt aaacaattgc tcacttggtt ggtaagcagg
     7801 tatacaaccc aaatgcgtac aaagtcctat aaccacagta taagctgcgt tatctaccac
     7861 aacatcacgt ttttcatctt ttggcatact cgcatctttt tttaatataa aaataggctt
     7921 tttacgccat tctatagttc taagctctcc atcttgcatt cctgataaat ctactgtagt
     7981 aaaacctgca gctttaacac ttggaagcgg atcccaagtt tttttcatcg caacaagtga
     8041 gaaaacaccg cctacagcag ctacgcttcc aaatgcaaag cccataaagc ttcgtctact
     8101 ctcagatgta gccataactt gctcctttcg attttatttt ttaaccaagt taaaagttta
     8161 tcgaaattaa aataaatttt ttctttgttt aacaagtttt gatatttaga caataagagc
     8221 aaaaagagaa aaaacaagca caggtaaagt tatcaaaaag ccaaatttac aatattgcca
     8281 aaaagaaata ttaatgcctt ttctagccaa aactccaagc caaagcaaag ttgctaaaga
     8341 acctattggc gtaagttttg gacctatatt tacacctaaa agatgtgcat aaatcatcaa
     8401 agaatcaaaa gaaaaattct caaaatattc ttttaatgcc aaatctccga ttaaaaccat
     8461 aggcaaatta ttaaacacag aagatccaaa agctgaaatc aaagccacac caaaaattcc
     8521 actcttatct tgcatcaaaa aagcatagct tttaaccaaa atttcactca cacctatttt
     8581 atgtaaagca aaaaccacca tataaagccc aaaactaaaa agcaaaactc cataaggtgc
     8641 ttcaaaaaga attttaatac tttttttacc ttgaattttt aaaataataa gccaaaaaat
     8701 tcccgcccaa agcaaagcaa aaaaacttat tttaatatta aaaatttcac ctataaaaaa
     8761 actgataaca aaaagaaata aaaatactat gcaaagaaaa aacaatttca atgaaatttg
     8821 ctcttttttg attaatttaa attcaagcct tttaggtaaa actctcacat aaagcacaaa
     8881 aaccgtaact atagtagaaa gcaaaacaaa aaaatttggc aaaaacatat ttttagcaaa
     8941 ttctaaaaat tctatcttaa aataatttgc tgtgatgata ttggttaaat ttgaaataac
     9001 caaagcgttt gaacttgcat cacataaaaa agaaaggcta agtaaaaaag aacttaaaat
     9061 aaaagcatga tttttacaat ctttaagagt tgaaaataaa gctataataa taggtgtaat
     9121 gattaaaatc gctccatcgt tagcaaaaaa tgcagaaaga aaaaatacaa aaatcaacaa
     9181 aaataacatc attttttttg tactgatata aattttttct tgatttttct ctctagaaaa
     9241 atacaaaatt ttactcgcaa taaaatcaaa aaatcccaaa gcttccaagc taaaagaaag
     9301 gataatcaac ccaaccaaag ttaaagaact atcccaaacc aaagaaaaaa caaaacaagc
     9361 atctttaaaa tctaccaatt gaaaaataaa aacaaaaaaa gcccccaagc tagaaaatac
     9421 ccaaataggt aaattccatg gacgccaaaa aagtaaaact aaagtagata aaaaaataaa
     9481 aaaagcaagc atttaagctt ttttcttttg cattttgata taaatttgca aaatatccaa
     9541 cgctgcagga gtgattccac tgatttgact tgcagcaaaa atggttggag gtttataatg
     9601 attaagcttt tctacaacct cattactcaa accacttaca cttttaaaat caaaattttc
     9661 aggaatttta agctcactaa gatttttcat tttttctact tgagcttttt gcatactaat
     9721 gtaatgataa tactttgcct catttaaaat ctctcttaag gagtaatgat ccatggtttc
     9781 aaatataggg tcaagttttt ttaatttttc tatatcaaaa cttgctcttg caacaatttt
     9841 ttgaagattg actatagaag aaattttatc ttctcctaaa ctctctaaaa aagcattatt
     9901 ttggttgtta ggcgtaaatt ctttagaaag taaaaattca agtccttttt gaagattgtt
     9961 tgcgatattt tgtatataag taaaatcttg ctcgcttaaa agccctaaat catagccata
    10021 ttttccaagt ctaagtatag cattttcttc ccttaaaagc agtctaaatt ccgctcttga
    10081 agtaaacatt ctataaggtt cttttgtgcc ttttactacc aaatcatcga ttaaaactcc
    10141 tatataagct tcatcacgcc ttaaaatcaa aggctctttc atatctatgc ttaagcttgc
    10201 attgattccc gccataaagc cttgtgctgc agcctcttca taacctgtag ttccattaat
    10261 ctgtcctgca caataaagat ttttaatctt tttaagttct aaagtatgct taagttcagt
    10321 tggctctata tagtcatatt ctatagcata accaaaacgg gttattttag cattttcaaa
    10381 accctctaca gaacgcaaca tttgagtttg tacttcataa ggtaaagaag tagaaaaacc
    10441 attgatataa tactccgtcg catcgatagt ttgaggctct ataaaaagat gatggctttc
    10501 tttgtcgcta aaacgattga tcttatcttc tatagaagga caataccttg gccccacacc
    10561 ttcaatctgt cctgtaaaaa gcggagcacg ataaaaatta ttcttaataa tctcatgtgt
    10621 agttgtatta gtgcgtgcga tataacaagg aagttgagta ggattgaaat ttcttgaacg
    10681 aaaactaaaa gctttaggat ttacatcacc atcttgaatt tcaagcacgc taaaatcaat
    10741 gctttttgca tccactcttg ggcaagttcc tgtttttaaa cgtcccattt ttaaacccaa
    10801 agtttgcaga taatttccta aatttaccga agcaagctcc cctacccttc ctgcttgaag
    10861 tttattttca cctacgtgaa taagtccatt taaaaaagtt cctgttgtta ggatgacttt
    10921 tttggcaaaa tatatatttt ctaaatttgt ttttacgcct ttaacttcat cattttctac
    10981 gattaaaaca ctcgcttgtt cttgagaaat ttctaaattt ggaagtttta aaagtttatt
    11041 acgtgtaatg atacggtatt tatccatatc aatttgtgcc ctacttcctt gaacggctac
    11101 acccttactt tcatttaaaa tgcgaaattg tatccctgct tcatcggtga tttcacccat
    11161 aagaccaccc atggcatcaa gttcttttac caaatgtcct tttgcaagtc cacctatggc
    11221 tggattacaa cttgccgctc ctatttgctc aatcaatgta gttaaaagta aggttttttt
    11281 acccattcta gcagcagcag cacttgcttc aacacctgca tgtccaccac ctataacaat
    11341 gacatcaaac atattttgcc ttgaaaaatg tgaattttta aaagaaagat tatataatat
    11401 ttagacttaa aacaaactcg ttttaagtct aacaaaaatt tatttagctt cttggagaga
    11461 aaagattagc tcattataag ttttatctgc atctttgcat aaatttttaa gcatctcaac
    11521 acccttattt aagccttgtt gctgttctgc tcttaaaaga tcgctataaa gactttctat
    11581 tgtagaaata gcgcttttat ttggcatacg acgaacggaa taatagccta tgatattatt
    11641 attaacatct attgatgggg ttacatttgc aaaaacccaa tagtaattgt tatctttggt
    11701 tttatttttt acgtaagcaa aaatttcttt gccttctttc atataatccc ataaatattt
    11761 aaaaacagtt tttggcatct cttcatgtct tactatgtta tgaggtttat ttaaaacttc
    11821 acccatggta taacctgcat actttaaaaa atcatcattt gcataaacta ttttaccttt
    11881 taaatctgtt ttagaagtaa ttaaactatc ttcttgtaaa aaaatttctc ttgacatttt
    11941 cccaccctct taatttatat ttttaatttt gctaagattt cagcacttct ttgctctagt
    12001 gatttaatat catttacaat cgcatcataa gctttttgat cgatataatc ttgacttgat
    12061 tcttctattg cttttttagc gttatctttt ataaattctt tagctaaatt taactcagtt
    12121 tcagaactaa gctcattaat aacaccttga gctctctcat cttgacaaag attagaaatt
    12181 ggatctacac tttcaagatt gaaattttga gccccattta aatttaaata tatatttgat
    12241 ttataaagaa tatgatcgat tttaaccaca gacaaaatca atctctttgc aaaggatcca
    12301 aaattaacac caagagcact actattttct tctagacgtt taaaagcttg agaaaattta
    12361 ttaattcttt cttcagattc actaacaatg ttaaaaactt gctcactgcc actttggata
    12421 tttacaaaat cttgttgcat agtctgaatt gcaatagaaa tttcgcttgt agatctttga
    12481 gttctttctg ctaactttct aacttcatca gccacaaccg caaagcccct accatgctct
    12541 cctgcacgcg cagcttctat ggcagcgtta agagctaaaa gattggtttg atcggctata
    12601 tcgcgtatta cttcaaccac tgaagtgata ttttgtgaat tagccacaaa agtttgtact
    12661 gtctccttgc tcgaatttac aacatccatt aaagaaccca tagcactttg aagagaatcc
    12721 acctctgaac cattttctgt agctgtatga gaaatggcat ccactgtatc atatacattt
    12781 ttcatcatgc taatatcttg atttaatgag ctagaaattt gagacatgtc tttattttga
    12841 tttccaaggc ttaaatccat taaagttctt gataaagcat ttttaaaagt agatcttgct
    12901 gtcacttcta tgtttgctaa agctttattt ataaattcga tattatgagc aaaaattcct
    12961 tttaaacctt caggcaaagc cttacgataa aattcacctt tttgagaaca tgaaatagaa
    13021 gtattaattt cccttaagta agcttctagc ccatcaatag tattgttaag attatctgct
    13081 atttcggcta attttttgct ttttgttttt acatagatga ttctattgtc gaaattaccc
    13141 tcctttaact ctctacaaag aaccaaaagt ttatctatca ttatttgctc atctttgtgt
    13201 tgtctaagca aataaatcat taaaacagcg attaaaacaa aaattatcgc tccaacaaaa
    13261 atatgaataa aaatgacacc taaaacaccg ataacactta gaaaaatagt taacaataat
    13321 ccatttttca ccataaattt acccctttct attgaaaatt ttttgaagtc ataaatcaaa
    13381 cacaatactt taataatata ttactttaat ttctaggtga aaattataca ataaaaaaga
    13441 ttaaatatat cttatttaat tattttcttg taagttaaaa ataagttcat tataagtcat
    13501 tttataagaa cttacaatat ccattaaagc tgaaactcca gcattaatgc ccgatttttg
    13561 ctctttttca agtaaaattt tataaacttc ttcaattata gaaagagatt ttctattagg
    13621 tgcacgacga acagaataat aattgatgat atttccatta gtatcaaatg aagcacttac
    13681 atttgcaaaa acccagtaaa aattaccatc tttggcttta tttttcacaa atgcaaaaat
    13741 ttcatctcct ttttgaatat aatcccaaag acatttaaat acagtgcgtg gcatatcttc
    13801 atgtcttact atattatgag atttatacaa aagttcatca actttataac ctgcgtattt
    13861 taaaaagtca ttattggcat aaatgatatt ccccttaaga tctgttttag aagtaattaa
    13921 agcattttca gacaaaacta tttctttcat aatttaaaac atcccaataa aacaaataaa
    13981 tcaaaaatag aattattacc aataacaaac aacaaaaagc aaactgaatt gcaaaattat
    14041 aaaattttca aaaatatttt aaattttata atgcaaataa tgagaaattt tgtaacattt
    14101 atataaaaaa ttatcatatc atataaaaga aagtatttct agatttgttt ttttgttaaa
    14161 atttacaata cgcattgtta aaattatatt ttacaaagat caaaaggagt gaataaactt
    14221 ggaaacttta agtcaaactt tagctgaaag aaaaccgcct ttatataaac gtattatcaa
    14281 aagtcttgga ttttgggtga ttataggcat tattgcaggt attgtacttg gctatataga
    14341 taaagaatta gccattgcta gcaaaccagg agttgattat tttataggtg ctttaaaggt
    14401 tcttataggt cctattattt ttgttacttt ggttttaggc atcattagtc ttgaaagttt
    14461 aaaaaaagta ggtagtattg gtgctaaagc ggttatttac tttgaagttg taagtacttt
    14521 agcacttgct ataggtattt ttatggcaaa tgttatgcaa ccaggtcatg gaatgaatct
    14581 taatccaagt caacttgata caaaaagcgt tcaaaaatac atttctcaaa ccacagaagt
    14641 aagtgcgagc tctgagatta tgcatatttt aaaagatgct atgcctactg atattatcac
    14701 gccttttaca gaaggaaaaa ccatacaagt tttagttatt gctataatta ctgctttgat
    14761 tatttcttta atgagaacag aagataaaca ggcaattcaa agagtttttg aagtggtaca
    14821 aaattttgtt tttaaaattc tacaaatcat tatgtatttt agtcctattg ccgccttttc
    14881 agcaatggct gtactcatag ctcaatacgg aattggctct ttgatcaact tagcatattt
    14941 acttttagta atgctgattt catgtcttgt ttttatattt ggaatcttag gtctgatttg
    15001 ttattttgca aaagtaaata tcttcaaatt tatgagattt atctcaagag aagtattgat
    15061 cgtttttgca actagctcaa gcgagtctgc acttgctcct ttaatgagaa aactagaaaa
    15121 agcaggactt tctaaagcaa cagtcggact tgttttacca acgggatata gttttaatct
    15181 tgattgtaca aatatttatc tagctatgag cttaatcttt ctagcacaag ctttcaatgt
    15241 aaatttaagt ttagcacacg aaatcagtat tttaatagta ttaatgatag cttcaaaagg
    15301 tgcagtgggt gtaactggtt caggttttat agtgcttgga agtacgcttg cagctctagg
    15361 aaatatggaa atttcagaag caaatgcaac cttagcacaa gttctaccag tagctgctat
    15421 aggtgttctt ttaggtgttg acaaatttat gtctgaaatg aaggcggttg gaaatctttg
    15481 tggaaattca gtagcagcct taatcgttgc catctgggat aaacaaattg attgggaaaa
    15541 attccgctac gctatggaca atccagaaaa atttcataat gctggaatga actaatgagt
    15601 tctttggagg aaatcatatc gattaacctc ctctaaagta ttatcttttt tcctaaattg
    15661 ttttaaaaaa ctttcattga aattaaaact aaatccaact tgaacaacag tatcatcaac
    15721 agtctctctt gcactataat cacgacgcaa taaatttaaa ctaaatacac tataaggaga
    15781 gtaagatact tgataattag ttttatcatt atccttactt atatcaaaag caaaagcggt
    15841 ataagttgga attacaaaac tcattccaag ctgtaaattt ttttctgctt cattgggtat
    15901 ataataatta ctataagcct ttataaattt actataacca aactctgtac caaagctttt
    15961 agtatctttt tgttcctttt gtttatcaat aaaaccatta actccaaata aaaaatcatc
    16021 tttttcataa cgattgatta aaccccctga gtaattataa ttattttgag ccacaaaaag
    16081 ttctttttga aaaagcaaag aattattctc cccctcataa agagaactta aatttttaac
    16141 ctgcacattt tcattttgaa aatctaaatt cccatctgtt ttatctatac cattattatt
    16201 ttctaaagtt tttgaaagta agctatcaaa agtgctttta aaatccacat tctcttcttg
    16261 aatttttgga gcttctttgg tatttttata atcaaagtgc tcccaagaat tttgattatt
    16321 attttttgct aaagcctctg taagttcatc gccattgagt aaagaaaaca atgctattat
    16381 ataaaaaata cccctcatta ttcttatatt ccttattatt tcttgtttaa gtatttatta
    16441 taaaaaaata atataaataa aaattccaca aagactaaaa aataaaatta gcaaatttaa
    16501 agtaaataag tgtataatta aaataaaaaa gggttattaa tgcaaaaaga caacctcata
    16561 gcttttgtta tttttattat cagtactatc gcatttgtta tttggggatt tggttatatt
    16621 tcacaacatc aattgattct ttttattctt gcttctatat ttggcatttt tatggcattt
    16681 aatataggtg gaaatgatgt agccaattct tttggaacaa gcgttggcgc aaaaacagta
    16741 accattaaac aagctttaat tatagcagct gtttttgagc taagcggggc aatcttcgca
    16801 ggcgcagaag ttactaaaac catacgcagc ggtattgtta tttttccaaa ttctttagat
    16861 cctatgcttt ttgttatcat tatgcttgct gcacttttaa gctctggggt ttggattttt
    16921 attgcaacca agaaaggctt acctgtatca accacgcaca gtatagttgg tgggattgta
    16981 ggtgctagta ttatgatggg gcttttaaaa tttgatggga tccaaacact ctctatggtt
    17041 aaatggagcg aaattttaag aatagctatt tcttgggtag cttctcctct tttagggggt
    17101 attgtagctt atattattta ttcatatatt gataagaaaa ttttaaaacc atcagaaaaa
    17161 ctaaatgatg atttgaaaaa tatcaaaaaa gaaagaaaaa aattcaaaga agaatacttt
    17221 ttaaatttaa aaacaaaatc ccaagaagaa caaatcaaag aactttccgc tatagctttg
    17281 gatgaagaag aacaggaaaa taatttctat agaaataaaa tgaaggaatt taaggatcaa
    17341 gaaaaagata tagatattta ctctatttta aaaactcata tgccaatcat tgcttgtatt
    17401 gctgctgcta tcatttcggc aatgttttta tttaaaggtt taaataatgt tagcactttg
    17461 gatattttac aaaacttttg gattattgga attataggaa ctataagtta tgttataaca
    17521 tttgctatag tcaaaatcgt taaaaaaaca gaacttaata aaaccactga tagaattttc
    17581 tcatggtttc aaatatttac agcctctagt tttgcatttt cacacggagc caatgatata
    17641 gccaatgcta taggtccttt tgcagcgatt ttagatgtct taaaaaacgg cacaattaac
    17701 gcgacttctc ctgtaccttt tgctgcttta gctatgtttg gagttgctct agttgtaggg
    17761 ctttggtttt taggtaaaga agtgattact acagtgggtt caaaacttgc aaccatacgc
    17821 cctactactg gattttctgc agaacttggt gcaagcatag ttatactctt agctacacaa
    17881 tttggaattc ctgttagctc cacccatata ctcataggtg ctatattggg tataggagtg
    17941 tataataaaa acgcaaattg gattatgatg aagcctatag gattggcttg gattatcact
    18001 ttaccagccg ctggtattat ggcagcactt gtatttttag gatttaaact atctttagga
    18061 atttaagtaa agcttatttt tctaaaatat tttttccttt aattatatgc atcttaatct
    18121 ttccaaaaag tttatcctca gaataaagag aactttttgg agcaaaaatt tcttcattct
    18181 catcaaaaag aactagatta gcttctttgc caacttctat aactccacta tttaaaccta
    18241 aaaattcact aggattttta cttgtaaatt gacaaagctc ttgccaattt aaaaatcctt
    18301 ctttgattaa aaaagtataa caaagactta taaattcgca tacgctatga attccaaaag
    18361 ccgcttcatc aaaagctaaa tcttttaaag aaattgattt tgcactatgc agggaagtta
    18421 aaaagctaat ctttccttct tttaaagcct ctcttaaagc caaaacatct tctttgcttc
    18481 ttaaaggtgg cataagtttc gcagccgtat taaaatcttc acaagcacta tcatctttga
    18541 taagatgatg aatgcttaca agttttaaat ccttttcatc taataatact aaagaatctt
    18601 tcaaacttaa aagatcaaaa ataactttat ttttataaaa tttagccaat tctttcattt
    18661 tagctatctg gctagtttca gcgattttac tcatgcctat aagccctagc tcaaaactca
    18721 tttcacaatc attcatcact ccattatcat caaaatcctt atcataacaa cgcacaaaaa
    18781 ttggagagtc tttcataaaa gcatattgtg aacttacttt taaagtattt gcatctaaag
    18841 agctgtcaag ctctaaagca caagcacctt tatttaaaag agtggctaaa tttttaagct
    18901 tgccgtttgt atccttaacc cgcacacttg aaaaaatttg catctttctt tgagctaaat
    18961 tttgtaaaaa taaagcaaaa ctttcttcat caaaatccat gcaatcacgc aaaactatac
    19021 tagaaattcc tccttttaga cactcatttt ctaaaagctc taaattagct aaagaaaatt
    19081 tatcgttttt taaactcaca cacaaatcca caaaagatgg aagtaaagtc atacctttag
    19141 catctaaaat ttcttcgcct tgtaaattag aatcaatatt ggtaattttt ccttctttaa
    19201 tctctatatc ttgtaaagaa tctccataaa tttttgcatt tttaattatc atgatttttc
    19261 cttaatcatt ttgctttaat aaattctgcg ttgcttcttg cacgctttta cccttaaaaa
    19321 ttgccactac ttcatttaca ataggtgtat aaattccttt catttttgct agtttttcta
    19381 tagcataagc agtttttaca ccttctgcta cttcattaag ttcggctaaa atactatcta
    19441 atttttgatt ttgcgccagt tttaaaccca ctctataatt tcttgataaa acactcgttg
    19501 cagttaaaaa caaatcccct gccccactca atcctaaaaa agtttcttct ttagtgccaa
    19561 aaaatttacc aaaacgatgc atttctataa gtcctcttga aatcagtgct gctcttgcat
    19621 tattaccaag ttttaaccca tcactaatcc cacttgcaat tgctaaaaca ttcttataag
    19681 caccacaaat ttcagcacca cgaacatcat tatcaatata agttttaata aaatcaggga
    19741 aaaaacttgc aaatttttta caaagctctt gatttatccc gctaatcatc aaagcagtag
    19801 gaagtttttg catcacttca gcagcaaaag aaggaccgct taaaacacaa aaattttctt
    19861 ttggtacaaa atctaaaaaa atttcatcta aaaattgaca actttgatct tctatacctt
    19921 ttgaagcaat taaaattttt tgtcccttgt tgatgaaatt ttctttaagc caagcacgca
    19981 tcccttgaga acttaaagca aaaacaagat attcacattc taaagcttct tttatgctaa
    20041 caaaatcttc taaatcacgc tgatgcaaag aactgataaa acaattgtga ttttctttta
    20101 aggctagatg taaagcactg ccccattttc ccgcaccaat aaccgctata cgcatcaacc
    20161 aagctttgtt tttaaaattt catttacttt tgcaggatta aaagctcctt tgccttcttt
    20221 catggtttga cctacaaaga atccaaaaag cttctcttta ccacttttat actctgcaac
    20281 cttatcggca tttgcattta aaatttgttc aatcaccgct tctatggctg agtcatcact
    20341 tacttgttta agtcctagct tttctatagc ttcatcaatt tccacgctag tattttcaaa
    20401 tacaaaagcc aaaacatctt tagccgcttt tgcactgata gtgccatctt ctatgcgttt
    20461 aattaaaact ccaagctttt gagcatctac gagagaattt tctatagtca attctccttt
    20521 taaaagtccc ataagttcag tatttaacca atttacacaa agtttaggat ttaaattttg
    20581 agaaataaga ctttcaaaaa aacgactcat ttctaaagaa ctgattaaaa cctcagcatc
    20641 actttctttt ataccaagct cgtctataaa gcgtgctttc ttctcatcag gaagttcagg
    20701 gattttaata tccaaaaact catcttttaa taaaacaggc aataaatcag gatcaggaaa
    20761 atagcgatat tctgccgctt cttctttgcc acgcatactt cttgtaacta aatttgtcgt
    20821 atcaaaaagt ctagtttctt gaactacttc ttgttcgtaa gttccatctt cccaagcctc
    20881 actttgtctt tttacctcat attctatagc tttttggata aaacgaaaag aattaagatt
    20941 tttaatctct actctagtat aaagttttgt atcgccctta ggtcttatac taacatttgc
    21001 atcgcatcta aaacttcctt cttgcatatt tgcatctgaa atgtctaaaa agcgtatgat
    21061 agaatgaagc ttcttaagat aagctactgc ctcatcgcta cttctaagct caggttcgct
    21121 gacaatctca agcaaaggag ttcctgcacg atttaagtcc actttagaaa aattattttc
    21181 gtggatattt ttacctgcat cttcttctaa gtgtgctctt gtaataccta tgcgtttatt
    21241 ttcacccttt acattgataa aaagctcacc cttttctact atagggatat caaattgtga
    21301 aatttgatag gctttgggta aatctggata aaaataattc ttacgattaa aaacactttt
    21361 tttattaatt gttgcattga cagcttttcc aaaagctata gcttttttta cagcctcttc
    21421 atttaaaaca ggcaaagctc ctggtaaggc caaacaagtg ggacaaacat tggtatttgg
    21481 agcttctcca aaagaagttg cacatgagca aaagattttt gtttttgtat ttaactgagt
    21541 atgaacttca agacctataa ctacttcaaa cataaaattt ccttgaattt ttaaatgttt
    21601 tattttatct ttttttcttt tagaaaggct ttaaatatta actttaaatg ctataattct
    21661 tagacaattt atatttaagg agttaaaatg ccattattag acagctttaa agttgaccat
    21721 actaaaatgc cagctcctgc tgtgcgttta gctaaagtta tgaaaacacc taagggtgat
    21781 gatattagcg tgtttgattt gcgtttttgc ataccaaata aagacattat gagcgaaaaa
    21841 ggtactcata ccttagaaca tttatttgca ggatttatga gagatcatct taattcaaat
    21901 tcagttgaaa ttattgatat ttcacctatg ggttgtcgca cgggttttta tatgagttta
    21961 attggaacac cagatgaaaa aagtgttgca aaagcttggg aagaagctat gaaagatgtt
    22021 ttaagcgtaa gcgatcaaag caaaattcct gaacttaata tctatcaatg cggaacttgc
    22081 gcaatgcatt ctttagatga agccaaacaa attgcccaaa aggttttaaa tctaggtatt
    22141 agcataatga ataacaaaga attaaaactc gagaatgctt aaaaagaatc tttatttttt
    22201 aaacgattaa gctttaatta atatattttt atatatgatt ttgaaatttt attattttaa
    22261 aaggagaaaa aatgaaactg atgtgcgaga tgtgtagtat ctagtgcgtc ctttggctta
    22321 acattatgtt tccaaaggtc caaaaagtgg ataaggagat ataatgtgta agaaagtcaa
    22381 aaaagtttat tttttcaaaa tactcattta aaatcttaac ttacaaaaat ttctctaata
    22441 aaatttaatt caaaatatct tcttatcctt aattttaatt taaggagcaa aaatgaattt
    22501 acctatactt gatttacaag cttatgaaaa agataaaagc acttttctta aaaatttaag
    22561 agaaattgct tctaaaatag gtttttttta tcttatcaat accagtatag ataaaaattt
    22621 aaacgagaaa ttattcaaac ttggcaaaga attttttaat ctttctagaa gttcgaaaga
    22681 gcttatttct atggtacatt ctcctcaatt tagaggttat actagcgaag gttttgaata
    22741 cacagcagga actaaggatt atagagaaca actggatata ggcacagaaa gagatgcttt
    22801 aaactggaat ttaaactcac ccttatggca aagactagaa ggtcctaatc tttggcctag
    22861 tgaaattcca gaacttaaaa aaactttctt aacttggcac aaacaaacca aaaaagcttg
    22921 tttaaagctt ttaaaaacct ttgctcaagc tcttgatcta cctagcaatg cttttgataa
    22981 actttatgga gaaaattctt acgaacattg taaaatcata cattatccaa aaagctcaaa
    23041 aaatatcact caaggcgtag gttcacataa agatggtggg cttatcactt ttgtttttca
    23101 agaaaaacaa agtggacttg aagcttttat agatggtaaa tggcttagta tacccccact
    23161 tgaaaatagc gttgtagtta atataggaga atttttagaa ctagctacca atggctattt
    23221 aaaagctact attcaccgcg tgaatttaag cccaaaagaa cgctttagca tagcttattt
    23281 tcttggagtg caacttgata aggatatacc tatttttaag ttaaatccag agcttgccaa
    23341 agaaagcaaa ggtgtggata ctgatcctaa aaatccactt ttaagaaatg ttgcaagtaa
    23401 ttattttaaa agaatgatac gctctcatcc tgatgtagca agtatttatc atagtgactt
    23461 gatagaaaaa tttagttttg cataaaggag aaaaaatgac tttatttact aaagcttttt
    23521 gcgtcgctac tctttttacc ggttttgcat gggcaaatga agaacttaaa gttggctctt
    23581 ctataacacc tcatgcagat attttaagat ttataaaatc agcacttcaa aaacaaggtt
    23641 atgatttaaa aatttatgaa tttaatgatg gggtaatccc taatgtaatg gttgaaaatg
    23701 gtgagttaga tgctaattat tttcagcatg aaccttattt aaaagaattc aatcaaaggc
    23761 aaggcaccca tcttgtaaaa gttgccagta tccatataga acctatggca gtgtattcaa
    23821 aaaaatataa agaatttaac ccagaggaag gacaaagcat ttctataccc aataatccta
    23881 caaatgaaag ccgtgcttta cgcattgtag caagcaaagg acttatagaa gttaaggata
    23941 atgagctcat cactccttta gatatcacta aaaatcctaa gaagcttaaa tttgtagagt
    24001 taaaagacgc tcaacttaca aggagtttaa atgatgtaga ttattctctt attaatagca
    24061 attttgctat tttagcaggt ttaaaccctg taaaagatgg gctttataca gaaagtaaat
    24121 atagtgaata tggcaatatc atcgccgtta aagaaggtaa tgaaaacctt cctaaaatca
    24181 aagccctagt aaaggccttg caaagcgatg aagttaaaaa atttatagaa gaaaaatatc
    24241 agggtgcttt aatccctaca ttttaaggag aacaaatatg aaaaattcaa tcatttctta
    24301 cccaagaata ggtgcaaata gagaattaaa atttgctatt gaaaaatact ttaaaaacca
    24361 aagttctaaa gaggagcttt taaagagtgc taaggattta aggattagac actggcaaga
    24421 aattcaaaaa gctggcattg attttatccc tagtaatgat ttttcacttt atgataatgt
    24481 cttagatgca gctgtgcttt ttaacattgt tcatacaaag tataaaaatt taaatttaga
    24541 tgctttagat gaatactttg ctcaaagtcg aggttatcaa ggagaaaatg gagatgttac
    24601 agccttagca atgaaaaaat ggttcaatac aaattatcat tatttggtgc ctgagtgcga
    24661 taatgctgat attatagctt taacagggga taaaattttt aaagaatatc tcgaagctaa
    24721 agagcttggc atagaaagca agcctgtttt aataggcatt ttcacacttt ttaaactcat
    24781 tgcctttaaa gatgaaaaaa ctcaaaaact cgctaaagaa aagcttttaa acgcttacat
    24841 agagcttttt gataaactaa atgaacttaa agtgacatgg cttgaacttg atgagcctta
    24901 tttggtttat gatttaagca aggaagatat cgctttgttt gaagaatttt accaagaact
    24961 tttaaatcac aaaaaagatc ttaaaatttt acttcaaagc tattttggag acttaagaga
    25021 tatttatcct aaacttttag aaagcaaatt tgatgctttg ggtcttgatt ttatcgaagg
    25081 taaacaaagc ttagccttag ttcaaaaata cggctttgct aaagataaaa tcctttttgc
    25141 aggtcttatt aacggcaaaa atatctatgc taatgattat gctaaaagcc taaagcttgt
    25201 taaagagctt caaaaatata cacaaaatat cgtcttaaac acctcttgtt cgcttttgca
    25261 tgtgccttat agcactgaat ttgaaagcaa attggatcca agctatctta aactttttgc
    25321 ctttgctaaa gaaaaacttc aagaacttaa agatttaaaa gaaatcttaa attctagcga
    25381 agaaaattcg ctctttagag ccaatcaaga gctttttaaa aatatcccgg agcgtttaga
    25441 tgaaaaagtc aaagcaaggc ttaaggcttt aaaaaaagaa gattttacca gaacgcctag
    25501 ttttaaagaa cgcgccttaa tccaaaaaga atttttaaaa ctccctcttt taccaaccac
    25561 aaccataggt tcctttcctc aaagtgccga tgtaagatct aatcgccttg cctttaagca
    25621 agaaaaaatt tcagctcaaa actacactga atttaaccaa caaaaaatca aagaatgtat
    25681 acaaattcaa gaagaaatag gacttgatgt tttagtgcat ggagaatttg aaagaaatga
    25741 tatggtggag tattttggag agaatttaaa gggcttttta tttactcaaa atggctgggt
    25801 tcaaagctat ggcacaaggt gcgttaaacc tcctgtgatt tggggtgatg tatcgcgcac
    25861 aaagcctatt accttagctt ggtctaaatt tgcacaaagt ttaagtcaaa aaatcgtaaa
    25921 aggcatgcta actgggcctg taaccatact taattggtcc tttccaagag aagacatcag
    25981 tctaaaagaa agtactgagc aaattgcctt agctataaga gatgaagtgt tagatcttga
    26041 aaatgcaggt ataaaaatca tacaaattga tgaagccgct ttgcgtgaaa aactgccttt
    26101 aaggaaaagt gattggcata gtgagtattt agattgggct attcctgctt ttaatcttgt
    26161 gcatagtggg gtaaaagcta aaactcaaat tcacactcat atgtgttata gtgaatttag
    26221 cgatatctta aaagaaattg acgctatgga tgctgatgtg atttcttttg aagcttcaag
    26281 atcaaactta agtcttttag atactctaaa agctgttcat tttaaaactg aagtaggacc
    26341 aggagtttat gatatacata gccctagagt tccaagcgta gaagaattaa gtttaactat
    26401 agaaaaaatt ttaaacaaat tacctaagga gcaaatttgg atcaatccag actgcggact
    26461 taaaacaaga gcctatgaag aagtcatagc ctctcttaaa aatttagtta cggctacgca
    26521 aaaaatacga gaacaattat aaggagtttt catgtgtagt ttttcttttg aagtttttcc
    26581 accaagaaag gatgaaaata tcaaaaatct tcatgctatc ttagatgatt tagggcaatt
    26641 aagccctaat tttatcagcg taacctttgg cgcagcaggc tctatcaatt cacaaaatac
    26701 tttagaagtt gcaagcttaa tccaggaaga atatcaaatt cctagcatag tacatttacc
    26761 ttgcatccat tctagtaaag aaaaaatcac tcagatactt caaaaatgca aagaaaaaaa
    26821 tcttaatcaa attcttgctc taagaggcga tatatgtgaa aatttagaaa aaagcaaaga
    26881 tttttcttat gctagtgatt taatttcttt tataaaaaaa caagaatact ttgaaattta
    26941 tgccgcatgc tatcctgaaa aacataatga atctaaaaat ttcatcgagg atatacacca
    27001 tcttaaaact aaagtaaatg caggaacaga caagctcatt actcaacttt tttacgataa
    27061 tgaagatttt tatactttta aacaaaattg tgctttagca ggtattgaca tacctattta
    27121 cgcaggtatt atgcctatta ctaacaaaag acaggtttta aaaatttctc aactttgcgg
    27181 agctaaaatc cctcctaaat ttgttaaaat tttagaaaaa tatgaaaata atgctttggc
    27241 tttagaagat gcaggtatcg cgtatgcttg cgatcaaatt gtcgatttaa tcacaagtgg
    27301 tgtagatgga attcatcttt atactatgaa taaatccaaa gcggctatta aaatttatga
    27361 agctgtaaag catttgctta aagaagagct tcatgtttag aaaataaact attttttgct
    27421 tttatcttaa cttattttca ttttttagct tatggttttc tataagtaaa acaaaaatta
    27481 aagataaaag caaacctggt ataataccca agcaaagata gaaaaaagaa ttatatttaa
    27541 aaaagaagaa aagtgcacca aaaagcatta aagctaaaga tgcacctttg aaaaattcta
    27601 aaatatagat caatgacctt cctcaacaac agttgcaccc gctaaatata cataagttaa
    27661 aatcataaaa ataaaagctt gtaaaaatgc cataaaagtt aaaagcacat aagcaggaag
    27721 cggagctata taaggaacta aagctaaaat taccatcaaa aataaatcgt cacctttaat
    27781 atttccaaac aaacggaagg acaaagaaac cacacgagaa agatgagaga ctatctctat
    27841 aggaaacatc aaaggagcta aaagtttaat aggtcccatg aaatgagcaa aatactttac
    27901 aaaaccttgt gccctaatac cctcaaaatg ataatataca aaaactataa tagccaagga
    27961 caaagtcaaa tttaaacttg cagttggaga gtgaaaacca ggtattatgc ctataatatt
    28021 actaaaaaac actataatcc ccaaagttgc aaccaaagga agatattttc ttgcaccttt
    28081 ttcacttccc atggtatctc tacccataga taaaactccc tctaaaaaag cctcacctaa
    28141 attttgcata ccgcggggaa caagttgcat agaacgagta gccatcatag ccactataac
    28201 agcaattaaa gctaccaaac ctatgtgaaa aaaataagaa aaagtatgac ttgcatcaag
    28261 caaagagcta aataaaaata aatctttcat ggtttcctcg aaaattttat tctaaactcg
    28321 aaattttagc aaaatcttac ttatatttta atgaaaattt acatccattc taaaacttgt
    28381 gaaagttctt tagcaacaaa acacttaagc cctatatctt ccaaaggctt agaaggaaca
    28441 atagcatttt taaatttttg cattttagct tcttttaaac gcatatcaag gctaaaaacc
    28501 tctctaattt ctccatttaa actaagttct cctataaaaa tactatcttt actcaaaggg
    28561 cgatttttaa aacttgaaat aatagctgca accacagcta aatccgcagc agtttcactt
    28621 acttttactc cgccgctaat atttacaaat acatcataat gccctaaagg aatttcaagt
    28681 tttctttcaa gcaaagccaa aagcatatct aagcgatttt tttcataccc tgtagcgctg
    28741 cgttttggat aagaactttc acacaccaaa gcttgaactt ctaaaaccaa agcacgagat
    28801 ccttccatca caacacctaa agcacttcct gaaatagcct ttccacgagt aaaaaaacga
    28861 tttgccaaat cttttgcact gatcaaaccc ttagcagtca tctcaaaaat acctacttca
    28921 ttcgttccac caaaacgatt tttaaagcct cttaaaagtc tgatttcttt agtggcatct
    28981 ccctcaaaat aaagcaccac atctaccata tgctcaagaa ctctaggtcc tgctatagca
    29041 ccttctttag taatgtgccc tatgataaaa gtactgatat tataagcctt actcacacgc
    29101 ataagctcaa aagtaatctc acgcacctga gtgatgcttc ctgctgctga agtgatttta
    29161 tttgaatata gagtttgtat agaatcaacg ataagaatgc tataatcttt tttgtgcaat
    29221 tcttctaaaa tattttcaag gcaaagttca gtaagtaaaa ataaattcgg agtattagcc
    29281 tcaagacgat cagctcttaa tttaatctgg gctttacttt cttcgccact gacataaagc
    29341 acttttttac cctgtttagc taaatttgaa gcaattttta acaaaagcgt agattttccc
    29401 acacctggac ttccgcctat aagcactaaa gaaccttcaa caagccctcc gcctaaaacc
    29461 aaatcaagct cattatcatc tgtgctgtat cttgtaaaat gctctaactc cacatcttca
    29521 atacaaacag cctcacttgt tttcatgcta acttgcgcaa gctcttttaa aactttaatt
    29581 tgctcagctt ttaattctac aaaactatcc caagctccac aatcaggaca ttttccaagc
    29641 catttgcttt gttgatttcc acaagcttga cattcaaaaa gtgctttatt ttttgccatt
    29701 attcaaaaat aggatctaat aaagtatcta aataagcact tgcattaaat tcttgtaaat
    29761 ccgtcatttg ctcacccacg cctacataaa aaataggaag ctcaagctct cttgctatac
    29821 taaaaagtgc acccccttta gctgtcccat caagctttgt gataatcaca ccatcaagtt
    29881 ttacaagctc attaaaagct ttagcttgta aaattccagc atttccctgt gttccatcta
    29941 aaactaaaat ttttctatgg ggtgcgcctt ctaaagcttt gtttgaaatt cttacaattt
    30001 tttcaagctc atgagctaaa tttttttgat tttgcaaacg ccctgctgta tcgataataa
    30061 ctctatcaaa atcctttgct tttgctttag aaatggtatc aaaagcaacc gctgaaggat
    30121 catgcccttg tgcagttaaa actatatcta catccacttt ttgcgcccaa agttttaatt
    30181 gctcaatcgc acctgctcta aaagtatcac acgctcctaa aatcactttt tgattttggt
    30241 ttttgtataa ataagcaagc ttggcaatac ttgttgtttt tcctgctcca tttactccta
    30301 aaataagctc tacaaaaggt ttttcttgat tggtttcttt tttttcataa agaaaataag
    30361 aacccataac acgctttaaa tcttcttttt ttacttcatt ttgaggtggt aaataataaa
    30421 ttatctcttc aactatttca taacttacat ctgcttcaag caaaatttct tcaagcaaat
    30481 ctttggttat ctttttattc tctcctttaa ctccaacaat attttcaaga gtttttgcaa
    30541 gtcctttttt aaaaaaatta aacattaaag tatagccttt tgtatatcaa tttctagcat
    30601 ttcttcagga ataagcccta aatactgatt aatcaattta gaatgcttgt tgtaaagaaa
    30661 catggtagga attccattta ccccacctaa agctttagct aaaagatagt tattttcacc
    30721 attagcgact ttataagata ttttatgctg ttctataaat ttttgaatct catcgttaga
    30781 tttatcttct aataaaaccc caactatatt aaaatcatta ttatactttt cttgtaattt
    30841 attaagatga gggatttcag caatgcaagg ggtacaccaa gtggtaaaaa atacaaacaa
    30901 agttacctta tcttcatcgt tgaaatttaa aacggcattt tcttttttaa ctgaaattga
    30961 tcctccatca atcaaattaa gtttaaaatt catatcatca ctttgattta tacttgcctc
    31021 ggtgcttaaa tttacatcat tttgctgctt ttctttatca ttgctacaag caacaaacaa
    31081 acaagatatt gccactagta aaagtatttt tttaatcttc attatttatc aatcctttat
    31141 tattctttat aaaaatgcta aaattataac atacataaga taatattttt ttaaaggcat
    31201 attaatggaa aaaacagatt ttagggcatt gcaaaaaata cgccttttca aacattcaaa
    31261 actaaatttc aaacaagatt ataaaatatt taaagaatgt cttaaaataa taaagctatt
    31321 taaagctaaa aatattttaa tttttattcc tttgcattat gaaccaaact taataaaatt
    31381 tcgccatatt cttaataaaa attacaaact ttttgttcca tttatgcaag ataaaagttt
    31441 aaaaattgta aaattaagat tgccttttat taaaaaaagg tttggggttt tagagcctat
    31501 agattctttt tttaaagcaa aaattgattt agctattgtg cctgtaattg gcgtcgataa
    31561 aaatttaaaa agaataggac atgggcaagg tttttatgat agattttttg aaaatttaaa
    31621 ttacaaacct catataatat ttatccaaag tatagatgct ttaagtcaaa ataatctaac
    31681 acaaaagcat gatatttcag gaaaattata cataaaccct tataaaaaat attacaagaa
    31741 agaaagaaaa aatgatagaa tcacttatcg cacttatagc cgctatagtc ggactcggta
    31801 taggatattt agttgcaaaa aaaatcaatg atgccaaata tgaaattttc gtagaacaag
    31861 ccaaagctaa agccaaagct atagaatacg aagcggagct tattttaaaa gatgcaaaaa
    31921 attcaattct taatgcagaa ttagaagtta aaaaaaaata cgaagaaaaa actcacaaat
    31981 ttcaaaaaga ttttaatcaa aaatttgatg atctttctaa aaaagaacaa aaacttcagc
    32041 aagaagaaga aaaactaaaa gaagataaag aatacctttg caagtcacaa aaacacattc
    32101 aaaacttaca atctgatgtt gataaattaa aaaataaata tcaagaaaaa cttgacgatg
    32161 ttttaaaaat tttagaacat tcgacaggac ttacacaaaa tgaagccaaa gaaatcattc
    32221 ttaaaaaagt agaagaaaat tctcgcgagc aaattgcaca tatagtaaga aaatatgaag
    32281 aagaagcaaa aaatgaagct aaaagaaaag ctaatttcat cattgctcaa gctacttctc
    32341 gttttgcagg tgaatttgca gctgaaagac ttatcaatgt tattaacatt aaaaacgatg
    32401 aacttaaagg acgtatcatt ggtaaagaag ggcgcaatgt taaaaccttg gaaatggttt
    32461 taggtgttga tattatcatc gatgatacac caggtgctat tatagtaagt tgttttaatc
    32521 tttatcgccg tgctattgct acaaaagtta tagaactttt agttgaagat ggcagaattc
    32581 aacccgcgcg catagaagaa attcacgaaa aagtgtgtaa agaatttgat agtgccattc
    32641 tagaagaagg cgaaaccata gttatggatc taggtttaaa taaaatacac cctgaaattg
    32701 taaaactcat aggaaaactc aaataccgag caagctatgg acaaaacgct ttagcacatt
    32761 ctttggaagt ggctcacctt gcaggaatca ttgctgctga gtgtggtgga gatgagaatt
    32821 tagcacgtcg tgcgggaatt ttacatgata taggaaaagc attaacccat gattttgaag
    32881 gatctcatgt ggatttaggt gcagaacttt gcaaacgcta caaagagcat cctgtagtaa
    32941 tcaatgctat ttacgcacat catggacacg aagaagctac aagcatagaa tcagcagctg
    33001 tttgtgcagc agatacttta agtgctgcac gacctggagc tagaagagaa gtgttagaag
    33061 ctttcttaaa aagagtcagt gagctagaag atatcgctaa aagtaaagaa ggaattaaaa
    33121 atgcctatgc aatcaatgcc ggaagagaaa ttcgcgtcat agccaatgct cagcttgtta
    33181 atgatgatga aagtgtactt ttagctaagg aaatagcagc tgaaattcaa gaaaaaatgc
    33241 aatatcctgg tgaaattaaa gtcaatgtta tacgtgaact tagagctgta gaatacgcta
    33301 aataaggttt attatgcaag atatgattga tactttaata aaatatggtt atattgtttt
    33361 attcttttac tctttagggg gcgggatggt tggaatttta gctgcaggag ttttaagttc
    33421 tcaaggaaaa atggatctta gtttttgcat tgctcttgct tttattgcta ataccatagg
    33481 ttcaactttg ctttttatac ttggaaaata ttataaaaaa gacattatgc cttattttaa
    33541 aaaacaccga cgcaagatag cccttgctat gataaaaaca aaacaacatg gaattatttt
    33601 acttgtaact caaaaattta tttatggttt aaaaactttc attcccatag ctgcaggtat
    33661 ggcaaaatat aatttt
//
LOCUS       DAPIWB010000009        32104 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.009, whole genome shotgun sequence.
ACCESSION   DAPIWB010000009 DAPIWB010000000
VERSION     DAPIWB010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 32104)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32104)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32104
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.009"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(62..1099)
                     /locus_tag="RJ266_000359"
     CDS             complement(62..1099)
                     /locus_tag="RJ266_000359"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005021248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II asparaginase"
                     /protein_id="HDV7354141.1"
                     /translation="MKKLFICCLFIGVCMKKAKSRIAILGTGGTIAGFIDSTIATTGY
                     TAGAIDIDVLIKAVPQIRDLADISWEQIANIDSSNMCDEIWLRLAKKIAKLFAEGIDG
                     VVITHGTDTMEETAYFLNLTIKSDKPVVLVGAMRPSTAISADGPKNLYNAVALVANKE
                     AKNKGVMVAINDKILSARGVVKTHSLNVDAFSSPDFGDLGYIVDGKVFFYNNVTKAHT
                     KNAPFDVSKLTSLPKVDILYSYSNDGSGVAAKALFEHGTKGIVVAGSGAGSIHKNQKD
                     VLKELLKKGLKVVVSSRVVAGCVAVSDSDEKLGFISAEDLNPQKARVLLILALTKTSD
                     PKKIQEYFLKY"
     gene            complement(1153..2724)
                     /gene="recJ"
                     /locus_tag="RJ266_000360"
     CDS             complement(1153..2724)
                     /gene="recJ"
                     /locus_tag="RJ266_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HDV7354142.1"
                     /translation="MKIINKNEIKKILASRFEKDLHTKLCDLPLPCCLKDAYKAANRI
                     KEAVEKNEKVAIVGDYDVDGIISCVIMAEFFDDIGFDYIIRIPNRFKDGYGLNAEIIN
                     ELDVNLIITVDNGIAALEAAKLCKEKNIDLIITDHHMPQDVLPDAFAIINPKQKDCDF
                     PEIEICGAQVAWYLIAALKEVCKLKYDMCKFLELLAIAIVADMMELRDLNRALVRRGI
                     DHINKSKRAAFRAIKHYYQKDKFALDNIGFLIAPLINSAGRMDDASISYEFLHTKDFN
                     KALEYLEQIVSFNESRKDEEKQLFEDSLNQIDENDSCIVVSGLNWHEGVLGIVASRLA
                     KHFNKPAFVFSQNEEHLKGSARSVGKIDILALISKTNSILSNYGGHKGAAGISLNSEN
                     FEQFKNKIKKECSQISESEFLDTDEILGILEPSEIDFEMLEILESFEPFGHKNPRPFF
                     VLENLCVKNKKLLGKDEKHLKLVLTKENKTIEALFFNFDKEPELNQNISLLGSISKNE
                     FRGMVTPQFVVKEIL"
     gene            complement(2711..4342)
                     /locus_tag="RJ266_000361"
     CDS             complement(2711..4342)
                     /locus_tag="RJ266_000361"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HDV7354143.1"
                     /translation="MKQTKYIFVTGGVLSSLGKGIAAASIATLLKNSGLKVSILKADP
                     YINVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFLDESLSQDNNFTTGRVYQSVIE
                     KERRGEYLGKTIQVIPHIVGEIKDRIKKAGEGKDILIVEIGGTVGDIEGLPFLEAIRA
                     LRLEVGKNNAMNIHLTLVPFIKAAGELKTKPTQHSVGELRRIGISPDMIICRSEKALD
                     RDLKDKIAISCGVEKNCVIESVDAASIYQIPLNFLKQDILSPIAEILDLKNLKPNMEN
                     WDSLVKRVIAPSNEVKIAFVGKYVDLKESYKSLTEAIIHAGAALDTKVELKWVDSEKL
                     ENMESSEVFKDVSGILVAGGFGYRGVEGKIKAIQYARENKIPFLGICLGMQLALVEFA
                     RNVLKLKDANSSEFNEKCQNPVVYLIDEFMDTNGEKQIRTAKTPLGGTMRLGAYKCDI
                     KEKSLLAKVYNEVKSVKERHRHRYEANPKYRADFEKHGLIVSGESKGLIEAVELNCHP
                     FFLAVQFHPEFTSRLEHVNPVICSFIKAAINYEDN"
     gene            4462..5085
                     /locus_tag="RJ266_000362"
     CDS             4462..5085
                     /locus_tag="RJ266_000362"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HDV7354144.1"
                     /translation="MQITLLFHTPLSVCSHATRTCWQSFEKGDCGGEKDKELIDRVGN
                     KFKHASTLEHLNYTFYIQGISRACLQEVARHRHTSPSVKSTRYTLKELRNEAEFKIGD
                     FENASRYLVLCGNEEVDNASIKALENLRTILQKSISLDIAKYCLPESYKTELTLTINA
                     RSLQNFISLRSSKSALWEIRNLANALFEALPQEHKFIFEHCLHKDIE"
     gene            5205..6590
                     /locus_tag="RJ266_000363"
     CDS             5205..6590
                     /locus_tag="RJ266_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HDV7354145.1"
                     /translation="MDKQFFQDFLMLSQAHTITTLAMLCVVFYALKKMRDIKINFSLR
                     MLFALLMGLGFGFALQYLANFPDAKEASNILWYSETKHWFAFVSSVFVAFIKMLVVPL
                     VSICIIKVIIEIDKNIKISSLLGISLFWILFSTAIAATLGIFLGYSFDLGSNFAIHEG
                     NKQIREIQTFSNIILGLIPSNIIAAINKENIIAIVIFSFFIGISAKKISKKEEYEQAF
                     KSFHNFILTFYNIMMNMTATVIRFMPYAVVCMMANVLLSNGFEAIKTAGLFIMLIYIA
                     MLIMFGVHFLLLASQGLNPIKYAKKAFPVWLFAFSSRSSLGTLPMTTSTLQNKFGVNS
                     AIANFVASIGTTTGLNGCAGYFPALAAVFVAFATHTHIDFTFALMIVLVAVIGSLGIA
                     GVPGSATMAASIMLAGIGFGNNFVMLSLILAIDPIIDMARTASNVSGAMTSALCTAKN
                     LKALDKEIYNS"
     gene            complement(6629..8998)
                     /locus_tag="RJ266_000364"
     CDS             complement(6629..8998)
                     /locus_tag="RJ266_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HDV7354146.1"
                     /translation="MKVIKRNGRTEELDVSKIKKCTSDAVKDLEGVNLSELELDAKIQ
                     FRDGISTEEIQKTLIKTAVDKIDIDCPNWTFVAARLFLFDLYKKVNGMNRYNHLCEYF
                     EKGEKEGRILLGLKEKYDLDDLNAYIKPERDMQFTYLGIKTLYDRYLIKDSKGMPIEL
                     PQQMFMAIAMFLAQNEFNPQEWAKKFYDLISKFELMLATPTLSNARTTRHQLSSCYIG
                     STPDNIEGIFDSYQEMALLSKFGGGIGWDWSKVRAMGGSIDGHKNAAGGIIPFLKITN
                     DIAVAVDQLGTRKGAIAVYIEPWHMDISDFIDLRKNSGEERRRAHELFPALWINDLFM
                     KRVRANDKWTLFDPADTADLCDLYGEAFEKRYEEYEKDESITKEIVEAKELWKKILLN
                     YFETGLPFLCFKDSANRANPNAHVGIIRSSNLCTEIFQNTEPNYYQIKVVFENGDELH
                     FDEEQKVVIDGGYEKPAKKISTLDSIDGNKVYIVEKYKNDGKTAVCNLASINLSKVYT
                     KEDIERVVPTAIRMLDNVIDLNFYPHRKVKDTNLKSRAIGLGVMGEAQMLAEAKIYWG
                     SDEHLNKIDEIMEQISFEAINASSNLALEKGSYEDFEGSNWSKGIFPIDVASPKAKAL
                     TLREGLFDQSECDWVKLREKVKKDGMRNGYLMAIAPTSSISILVGTTQTIEPVYKRKW
                     FEQNLSGMIPVVVPNLSLDTWQYYTPAYELDQKILVKAAAVRGKWIDQGQSLNIFLSL
                     DKASGGYLNEIYQLAWELGVKSTYYLRSESPDSEKVNVADRSIECEGCQ"
     gene            complement(9014..10342)
                     /locus_tag="RJ266_000365"
     CDS             complement(9014..10342)
                     /locus_tag="RJ266_000365"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDV7354147.1"
                     /translation="MVERYSREIMAKKWDMQAKYDAWLKVELAAVKAWNKLGLINDTD
                     CEKILKNAKFDIARIDEIEKTTKHDVIAFLTSVSESLGEESRFVHYAMTSSDCIDTAV
                     ALQIKESLELILEDVSLLLEVIKKRALEHKNTLMVGRSHGIHGEPITFGLVLAIWYDE
                     ILHAKELLEHAKEVISYGKISGAMGNFAHAPLEFEEEVCKNLGLKAAPVSNQVIQRDR
                     YAQVISAIAILASSCEQIAVAIRHFQRTEVYEAEEYFSVGQKGSSAMPHKRNPVLSEN
                     ITGLCRVLRSFVTPALENVALWHERDISHSSVERFILPDAFITADFMLMRLTNLIDKL
                     LVYPENMMKNLNLTGGLVFSGRVLLELPFKGISREEAYKIVQRNAMKVWADLQNGKAA
                     INEKNESLFLLALLSDEDLRKSLSEEDVRKCFDYNYYTKNVDAIFKRTFK"
     gene            10420..11322
                     /locus_tag="RJ266_000366"
     CDS             10420..11322
                     /locus_tag="RJ266_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDV7354148.1"
                     /translation="MAYIKIKLSNNGKKAFQVLMENLKISINEAQKLIDKKRLFCDGI
                     LVEEKNKILNGLVELIVYENNPKGVEIVFENEDFAILEKESGILSHPNGRHCKYSLSD
                     EIWHLWGKEACVAHRLDKETSGLILITKNKKAQIDLKSLFEKKLVQKEYLALAHGKIE
                     ENFIVDKAINLTKNYDDVKTRMQICKEGKQAITEFEILEYFPKINATLLLCKPLTGRQ
                     HQIRVHLHYKNHTILGDPLYGLSKQQIESILDEKLNPKERLKLTGALRLCLHSYRLKF
                     QYKNQNFDINSKINIKEIFNNSIK"
     gene            11434..12312
                     /locus_tag="RJ266_000367"
     CDS             11434..12312
                     /locus_tag="RJ266_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HDV7354149.1"
                     /translation="MKFVNFIQGQKHNLGVLNSSGKIVSFTDLGIETNDMNEFIIYFD
                     KFKHKLTDLDSKIAYEIPKENYLAPIIEPRQDIICLGINFLDHAKESAKFKGEKFEER
                     EYPVYFGKRCNQATAPFGDIPLHADVTSQLDYECELAFILSKDAYKIKAKDAKDYIFG
                     YTIINEISARELQKRHKQFYRAKSLEGSTIMGPYITSVDEISYPPKLQLQSYVNDELR
                     QNSNTQLFIFDIAYVLEELSAGMLLKAGSIISMGTPSGVGMGLNPPTFLKSGDKVRCV
                     IENLGELCNKIKNINY"
     gene            12376..13290
                     /locus_tag="RJ266_000368"
     CDS             12376..13290
                     /locus_tag="RJ266_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HDV7354150.1"
                     /translation="MKKIIMILCLSYANIVFAVDMITPIPNSISYDKEKAKLGKSLYM
                     DKSLSKDGKVSCNTCHRLDQHGVDGLEFSIGVDNQLDKPFNTPTTLNSVFNFVQFWNG
                     RAKDLAEQAMGPFFNPKEMGLSPELLLQKVNSNENYVKTFKKLYGEVTVENIALAVAE
                     FEKTLITPNSPFDRYLSGDQNAISAQAKKGYEDFKANGCISCHQGQNIGGNMFQKIGI
                     FEEYPNQEDLGRYEITKREADKMVFKVPSLRNIAKTAPYFHDGSIPTLDACVQFMAYY
                     QLGKFLDQETVDNIVAFLESLTGEYHDK"
     gene            13280..15057
                     /locus_tag="RJ266_000369"
                     /pseudo
     CDS             13280..15057
                     /locus_tag="RJ266_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343491.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
     gene            15163..15330
                     /gene="dba"
                     /locus_tag="RJ266_000370"
     CDS             15163..15330
                     /gene="dba"
                     /locus_tag="RJ266_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein Dba"
                     /protein_id="HDV7354151.1"
                     /translation="MEFLELLLVLIALILIIKKPEKENLAFGLVMVAWLLMVFFYVGH
                     KTGALLTIMNL"
     gene            15342..16868
                     /gene="dsbI"
                     /locus_tag="RJ266_000371"
     CDS             15342..16868
                     /gene="dsbI"
                     /locus_tag="RJ266_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbI"
                     /protein_id="HDV7354152.1"
                     /translation="MNEINKTKNFYTLMCLAGFLIILLPVGIANLIFGYMLGDSPCTL
                     CWGQREAMIFIGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGF
                     GLAVFGIHTYFWAEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVL
                     ISAIIVASNVFQAFVSTGIPPYVGQGDPVRFSLNPKYIIWSKEGWNGLWQNISFLGKR
                     DVKAPDYAFAPASEKLGIKFDNDINNAPFAKINDELKITNEQTINFDKAINTLDYINN
                     EFVASSKWDVVFLDNNFSVKEGFELDPYFSASIDPIIGIIPYMNDKFILMGSNKSFLR
                     FAKNPNASEEDIAKQYADFVKGNDKFKGQGESLGRGRLDTVRAKFNHVASMTTDGNYL
                     YLATVPNNKDAKTFVISKVSLKDRVLSGEFTPKANLKEGKTLGDLYVTSMTFKDGEIY
                     ALSKNHNVIAVIDPVKEEVVKTIAFPSSITNARSIFFKDGKINILSYQDGANKLYTLN
                     "
     gene            complement(16889..17563)
                     /gene="queC"
                     /locus_tag="RJ266_000372"
     CDS             complement(16889..17563)
                     /gene="queC"
                     /locus_tag="RJ266_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HDV7354153.1"
                     /translation="MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKE
                     KECFKQICKALKVEKSYILDVSFIKDIGGNALTDKSIDIPKNELCTSDTPPITYVPFR
                     NGIFLSIAGSLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVC
                     IKTPLVRLNKAKIVELALKENVPLELTWSCYESEDEACGECDSCLLRLRGFEKAGFKD
                     KIKYKS"
     gene            17639..18865
                     /locus_tag="RJ266_000373"
     CDS             17639..18865
                     /locus_tag="RJ266_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD family hydrolase"
                     /protein_id="HDV7354154.1"
                     /translation="MINIKLIEHIFKAASISRWNDYPRMANLVELDKQAHKFIIAYFI
                     AKMEKDVDMRVIIEGGIFEFLSRVVVTDIRPDVYHEIVRQKKAEVNAWVLSKIEPMIE
                     DIEDGEFLKRFEAYLNGNAYAKERLILKAASYFATRWEFNIVYQTSAFLNDIDEIKNK
                     VEEELEDYYELIGARKIALNQKIAKIIDLSGRLRFQKRWAQTPRIPETAVLGHMLVVA
                     ILGYFYSLKIKACDKRLENNFYCALFHDLPESLTRDIISPVKYGIDGLHDIINDYEMK
                     LINERILPFVPEGLRAEFSYILGIREGRNGESNFVKNEFENRTYKNAKIELCSGSLSS
                     FNENEFGAIDGKALKYCDKIAAYIEAGLSISYGVKSKELESGFLGMHEFFKENPTIDG
                     VNFFEICESLREYFKI"
     gene            18957..19481
                     /locus_tag="RJ266_000374"
     CDS             18957..19481
                     /locus_tag="RJ266_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YagU family protein"
                     /protein_id="HDV7354155.1"
                     /translation="MKKYFQKRYTLAFFIGILAGIFGAIVKWGWEVPFPPRNPNVFWP
                     ADALERVTPPKIFLEQLGLPTDWTYMFSGMQMPLSIFIVHVGFSIIFGVAYCMIAEKW
                     HRITMWQGAVFGFFVYLFAHVIVMPLIAEVPPLSEIPFDEHLSEIFGHIVWLWGMEIV
                     RRDIRNRITKEIEE"
     gene            complement(19493..21169)
                     /gene="ilvD"
                     /locus_tag="RJ266_000375"
     CDS             complement(19493..21169)
                     /gene="ilvD"
                     /locus_tag="RJ266_000375"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HDV7354156.1"
                     /translation="MRSDAIKKGHLRAPNRSLLRACGLKDEDFDKPFIGVANSYIDII
                     PGHYFLNDYAKIIKDEIRKNGCVPFEFNTIGVDDGIAMGHEGMLYSLPSRELIANSIE
                     TVMNAHQLDALICIPNCDKITPGMLMGALRVNVPTIFVSGGPMASGVTKKGEKISLSS
                     VFEAVGAYESKKISEEEFKDIECSACPSGGSCSGMFTANSMNTLCEAMGIALEGNGTI
                     LALSKEREELLRKAARRICEIALDERFKIRNIITQKAVRNAMVVDMAMGGSSNTVLHM
                     LAISREAGVALDIKDLNFISSKVAHIAKIAPSLNSVYMDDIHKAGGVSAVIAEISSRQ
                     GHILELDALTITGESLKERLKNAKIKDENIIRKVDNAYSKVGGLAILFGNLAKQGCVI
                     KTAGIIGERKFKGKAVCFNSQDEAIKGIIKGKVQKGNVCVIRYEGPKGGPGMQEMLSP
                     TSLLMGMGLGADVALITDGRFSGATRGLSVGHISPEAAEGGLIGLLKDGDEIEIDVDA
                     YTIHANVSEEEIAKRKKEFALPQKEVSSRWLRMYQKLVSNASKGAVLDME"
     gene            21329..21976
                     /locus_tag="RJ266_000376"
     CDS             21329..21976
                     /locus_tag="RJ266_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="desulfoferrodoxin FeS4 iron-binding
                     domain-containing protein"
                     /protein_id="HDV7354157.1"
                     /translation="MRQYETYKCQKCGNEVEVQNVGGGKLSCCGEEMKCITTDLTAVN
                     LMKAFAGESMARNKYDLFADVAEEEGWHAVARHFREAAENEKWHARAEFKAYHEIVDG
                     KPLEVTTKNLVTAAEGENYEHTTMYPNFAKIAEDEGKKAIARLFTAIGKVEIEHEREY
                     LALKKMLEEEEFFNSEVEELWVCEVCGHIHRGKKAPAACPLCKAPKEYFKREFLG"
     gene            22041..22280
                     /locus_tag="RJ266_000377"
     CDS             22041..22280
                     /locus_tag="RJ266_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HDV7354158.1"
                     /translation="MKKLLFLFFALTAFLFGAVNINTATLKELKSLNGIGEAKAKAIL
                     EYRKEANFTSIDDLKKVKGIGDKLFEKIKNDITIE"
     gene            22313..22888
                     /locus_tag="RJ266_000378"
     CDS             22313..22888
                     /locus_tag="RJ266_000378"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HDV7354159.1"
                     /translation="MKTLFDTKELLNEFDINLIGIDEAGRGALAGPMMMAACKLNKQL
                     DGLCDSKKLSEKKREELYEIIIKNSNYLILAFSSEQIDALGLSTCLKKGLKLIKKHFK
                     TENNFLYDGNTNLGINGIKTQIKADASILQVSAASILAKVSKDRVMNFLAKDFPCYEF
                     EKNKAYGTKAHKELIAKFGICKLHRKSFKLL"
     gene            complement(22889..24334)
                     /locus_tag="RJ266_000379"
     CDS             complement(22889..24334)
                     /locus_tag="RJ266_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HDV7354160.1"
                     /translation="MGNARGFLDFKRMDFKKIAPKERVLNFKEFTIPLDKKEQEVQGG
                     RCMDCGVAFCHTGVMSEGKDVGCPLNNLIPEWNDLVYRSLWKEAYERLDLTNPFPEFT
                     GRVCPAPCEDSCVCAINGVSVSIKNNELSIIENAFKENLVRVNKPKQYNGKKIAVIGS
                     GPAGLACANTLNSLGYKVSVFERSDKIGGLLMYGIPDMKLDKSIVQRRVDLLKKSGIE
                     FKVNENIDSKDKVSKLLKEFDALVLCTGASKPIDLDIEGRKLKGVEFALDFLTQNTKT
                     LLKTGKGADMAKGKNVLVIGSGDTSVDCIAVATRQGAKSIVRFERSPKRPLQRSQNNP
                     WPLKADIFTTDYGLEEAIAVYDKDPREYQKMTKKFLGKTHVEGVEANDLKREFKEGKA
                     INVEIPNSKKTYKADLVLLAMGFSGCEEAIAKNFGVKLDEKNNISTENFQTTHKKIFA
                     CGDARKGQSLVVWAIKDGIECALSLHQNLAK"
     gene            complement(24337..26088)
                     /locus_tag="RJ266_000380"
     CDS             complement(24337..26088)
                     /locus_tag="RJ266_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF262 domain-containing protein"
                     /protein_id="HDV7354161.1"
                     /translation="MAGFQSPITINEAMQRIKNNEYLLPAFQREYVWEPWQIEELFDS
                     LIRGYPISSMLFWKVKDESKTAWKFYRFLEYYRESYHTHNDYFNTSNHKDFYAILDGQ
                     QRLTSLYFALFGNYDIHRSYNKWENNDRYFKICHFYFNLTQSKKPENENIEYEFLWLD
                     KLETKEQNIYIDKYQQKWFKCQYLYQYDSGRVRKIAKEFSLNENEEDRLDLLHQKIFD
                     KNLINFYLEEEQDPDKAVNIFIRINSNGEPLDYSDILFSIAIANWNKIDARTEINNLV
                     DKINENFDISKDLILKGFLYLFHNNIKFQINSFDKNFIESIEAKWEGIKNAFIETFRL
                     LRSFGFEAKTLSSNNAILPILYFIYHKNLTNNIVDSVKCNENRAIIKKWLLRAIILKP
                     FGGSSDTVLSNMRKAFIKDFKQNSGFFDREIELFPLEEIEKEAKYIQTIDEEYLENNV
                     IECRKNSPEAFAVLSLLYPNLDYKNNNFHKDHLHPESAYKEYEKLYKATDNCISFNIY
                     DSLPNLQMLDANENESKNNKPLKQWVNEKCNGNRKEFLGKHLIPDVDLSLENFNNFIE
                     ERKKIIIDKLKSILNKE"
     gene            complement(26098..30588)
                     /gene="gltB"
                     /locus_tag="RJ266_000381"
     CDS             complement(26098..30588)
                     /gene="gltB"
                     /locus_tag="RJ266_000381"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HDV7354162.1"
                     /translation="MDLENILENNQSIGLYHPKNEHDACGIAAVANIRGIASYKVICD
                     ALEILMNLEHRGGAGAEENSGDGAGILIQIPHDFFKTQELGFELPKKGDYAVAQMFLS
                     PNTDAKEEAKEIFLQGLKDKKLEFLGFREVPFNPSDIGASALKAMPYFLQAFVKKPSK
                     ISAGLEFERVLYSTRRLIEKRAINVPKFYFSSFSSRTIVYKGMLLSTQLSDFYLDFKD
                     VNMKSAIALVHSRFSTNTFPSWERAHPNRYMVHNGEINTIRGNVDSIRAREGLMQSEY
                     FENLDEIFPIIAKPSSDSAMFDNTLEFLALNGRTLEEAFMMMVPEPWHKNENMESKKR
                     AFYEYHSLLMEPWDGPAAIVFTDGVIMGASLDRNGFRPSRYYLTKDDMLILSSETGAL
                     KLDEKNIKAKKRLEPGKLLLVDTARGRVIADNEIKEHYANAKPYKKWLKNLVELEKQK
                     SGVYKHQFLKEDEVLKLQKAFGWSYDELKMSVAAMAQNGKEAIAAMGVDTPLAILSKT
                     YQPLYNYFKQLFAQVTNPPLDAIREEIVTSTRIYLGSEGNLLKPDENNAKRVKIALPV
                     ISNEELFEVKALNKFQVKEFSILYDYSKKTLEKALDELCVKIEDEVKKGVSIIILSDK
                     GVDEKNAYIPALLAVSGVHNHLVRKNLRTHTSLIIESGEPREIHHFACLLGYGATVIN
                     PYLVYESIQKLIANKDLNLSYEKAVENFIKASSSGIVKIASKMGVSTLQSYNGSALFE
                     CLGLSSKVIDKYFTSTTSRIEGMDLEDFEKELIALHKHAFNDTHKALDSKGIHGFRSA
                     KEEHLIDPLVIFNLQQACRNKDYKSFKKYSALVDEKQVNLRSLMEFDFSEAISIDKVE
                     SVESIVKRFRTGAMSYGSISKEAHECLAQAMNKIGAKSNSGEGGEDEERYEIKEGVDK
                     NSAIKQVASGRFGVDLNYLSHAKEIQIKVAQGAKPGEGGQLMGFKVYPWIAKARHSTA
                     GVTLISPPPHHDIYSIEDLAQLIYDLKNANKDAKISVKLVSENGIGTVAAGVAKAGAN
                     LILVSGYDGGTGASPRTSIPHAGIPWELGLAETHQTLILNKLRDRVRLETDGKLMNGR
                     DLAIAALLGAEEFGFATAPLIVLGCTMMRVCHLNTCPFGIATQDTELRDRFKGKVDDV
                     INFMYFIAQELREYMARLGFERLDDMIGRVDKLRQKSVQGKAGKLNLDKILKSLPTYN
                     RTAVHFKDYKDNKLEKTIDYRILLPLCKNAVEKKEPIKLSLEVGNQSRTFATMLSSEI
                     LKTYGKDALDEDSIHIKAIGNAGNSFGAFLLKGIKLEIIGDSNDYLGKGLSGGKIIAK
                     ISNEATFSPEENIIAGNACLYGATKGEVYLDGIAGERFCVRNSGALAVVLGTGVHGCE
                     YMTGGQVVVLGDVGANFAAGMSGGVVYIFGRHNEAHVNTELVDIKDLNAKDEKELKAV
                     IEKHITYTDSKKAKDILEKFDKKDFFKVMPRDYEKMLKMLDLCKNEKDPNLAAFLKIT
                     QK"
     gene            complement(30722..32029)
                     /locus_tag="RJ266_000382"
     CDS             complement(30722..32029)
                     /locus_tag="RJ266_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HDV7354163.1"
                     /translation="MILTLLTNPIIISVVLMTLLCLFRFNVLLSLLISALIAGVFSHL
                     ELVDTMNILISGMKENLKTALSYILLGAIAAAISKTNLTAYLIKIVSHFISHKKYLLL
                     LSIALISCFSQNLIPIHVAFIPLLIPPLLSLFNKLKIDRRAVACALTFGLTTPYMVLP
                     VGFGLTFQDLLKDNLNANNVSASLNDVTNTMYFAAICMIAGLFLALFVFYRKPREYQE
                     VEIAKVDLENLEMTRKEWGVLAGLVLTLILQILTMNLPLSGLLGFVLMVILGGVEFSK
                     VNEVFDDGLKMMGFIAFVILVAAGYGEVLKESGSVVDLVNSVVPWMEQSKFLAVFFML
                     LIGLIITMGIGTSFGTIPIIATLFCPICLELGFSTALIIFILGVAGALGDAGSPASET
                     TMGTTVGLNADKQHDHIKDTCIPTFIFYNGPLLILGSIIAMFL"
BASE COUNT        10858 a         5767 c         4518 g        10961 t
ORIGIN      
        1 ggattgaaag gcttgactta gggaagataa gttccctaag tttagaaata tttaaaaaat
       61 tttaatattt taaaaaatac tcttgaattt ttttaggatc acttgttttt gtaagtgcta
      121 atataagcaa aactcttgct ttttgaggat ttaaatcttc agcactaata aaacctaatt
      181 tttcatctga atcactcaca gcaacacaac ctgctacaac ccttgaactt acaacaacct
      241 taagcccttt ttttaaaagc tcttttaaaa catctttttg atttttgtgt atacttcctg
      301 ctccacttcc tgcaacaact atgcccttag ttccatgttc aaataaagct tttgcagcga
      361 caccactacc atcatttgaa tagctataaa gaatatctac ttttggcaaa cttgtgagtt
      421 tgcttacatc aaaaggagcg ttttttgtgt gagctttagt aacattatta tagaaaaaga
      481 ctttaccatc tactatataa cccaaatccc caaaatcagg agaagagaaa gcatcaacat
      541 ttaaactatg agtttttact acgcctctag cgcttaaaat tttatcattt atagctacca
      601 taacaccctt attcttagct tctttattgg caactaatgc cactgcatta taaagatttt
      661 tcggaccatc cgcacttata gcagttgatg gacgcatagc gccaactaga actacgggct
      721 tatcactttt aatggttaaa tttaaaaaat aagcagtttc ttccatagta tcagtaccat
      781 gagttatcac cacaccgtct atcccctcag caaaaagctt agcaattttt ttagcaagcc
      841 ttaaccaaat ttcatcacac atatttgaac tatcaatatt tgctatttgc tcccaactaa
      901 tatctgctaa atctctaatt tgcggaactg ctttaattaa tacatctata tcaatggctc
      961 cggccgtata tcctgttgta gcaatagtgc tatcaatgaa gcctgctatc gttccgcctg
     1021 ttcctaaaat agcaatcctt gatttagctt ttttcataca tactcctata aaaagacaac
     1081 atataaataa ttttttaatc tcttgtatat taatttttta atgttattaa tgcaaattat
     1141 aagtaaaaat ttttataaaa tctctttaac aacaaactgt ggagttacca ttcccctaaa
     1201 ttcattctta gaaatacttc caagcaaaga aatattttga ttcaattctg gctctttatc
     1261 aaaattaaaa aataaagctt ctatggtttt attttcctta gttaaaacaa gctttaagtg
     1321 tttttcatct ttacctagaa gttttttatt ttttacacaa agattttcta aaacaaaaaa
     1381 aggtcgtgga tttttatgtc caaaaggttc aaaagattct aaaatttcaa gcatttcaaa
     1441 atcaatttcg ctaggttcta agattcctaa aatttcatct gtatccaaaa attcactttc
     1501 agaaatttgc gaacattctt ttttgatttt atttttaaat tgttcaaaat tttcagagtt
     1561 taaactgatt ccagcagcac ctttatgacc accataattg cttaatatag aatttgtctt
     1621 agaaattaaa gctaaaatat caatcttgcc aacacttctt gcactgcctt ttaagtgttc
     1681 ttcattttga gaaaatacaa aagcaggttt attaaaatgt ttagctaaac gacttgccac
     1741 aatccctaaa acaccttcat gccaatttaa acccgatacc acaatacaag aatcgttttc
     1801 atcgatttga tttaaactat cttcaaaaag ctgtttttct tcatctttac gactttcatt
     1861 aaaactaaca atttgctcta gatattctaa agctttatta aaatctttag tgtgtaaaaa
     1921 ttcataagaa atacttgcat catccattct tccagcacta tttataagcg gagcaattaa
     1981 aaatcctata ttatcaagag caaatttatc cttttgataa taatgcttaa tagccctaaa
     2041 agcagccctt ttagatttgt taatatgatc tatgccacgc cttactaaag cacgatttaa
     2101 atctctaagt tccatcatat ctgcaacaat tgcaatcgcc aaaagttcta aaaatttaca
     2161 catgtcatat ttaagcttgc acacctcttt taaagccgct atcaaatacc atgcgacttg
     2221 agctccacaa atttcaattt ctggaaaatc acaatctttt tgctttggat tgataatggc
     2281 aaaagcatca ggtaaaacat cttgaggcat atgatgatca gtgataatca aatctatatt
     2341 tttttcttta cagagtttgg ctgcttcaag agcagctatt ccattatcta ctgttattat
     2401 taaatttaca tcaagttcgt tgatgatctc agcatttaat ccatatccat ctttaaaacg
     2461 atttggaatt cttataatat aatcaaaacc tatatcatcg aaaaattctg ccataataac
     2521 acaagaaatg attccatcaa catcataatc tcctactatg gcgactttct catttttttc
     2581 tacagcttct ttgatgcgat tagctgcttt atatgcatcc tttaaacagc atggcaaagg
     2641 cagatcacaa agtttggtat gcaaatcttt ttcaaagcgt gaagccaaaa tttttttaat
     2701 ttcattttta ttaattatct tcatagttta tagctgcctt gataaaactg caaatcacag
     2761 gattaacatg ctcaagtctt gatgtaaatt ctggatgaaa ctgcacagcc aagaaaaaag
     2821 gatgacagtt aagctcaact gcttcaatca atcctttgct ttcaccactt acaatcaaac
     2881 cgtgtttttc aaaatctgct ctatattttg gatttgcttc atagcgatga cgatggcgtt
     2941 cttttacact ctttacttca ttataaacct tagccaaaag ggatttttcc ttgatatcac
     3001 atttataagc ccctaaacgc atagttccac ctaaaggagt ttttgcagta cgaatttgtt
     3061 tttctccatt tgtatccata aattcatcaa tcaaataaac cacaggattt tggcattttt
     3121 cattaaattc acttgaattt gcatctttaa gttttaatac atttctagca aattccacta
     3181 aagcaagctg catacctaaa caaattccta aaaaaggaat tttattttct cttgcgtatt
     3241 gaatggcttt tatcttacct tctacaccac gatatccaaa tcccccagca accaaaattc
     3301 cactcacatc tttaaatact tcagaacttt ccatattttc aagtttttca ctatctaccc
     3361 attttaactc cactttagta tctagggctg cacctgcgtg tataatagct tcagtaaggc
     3421 ttttataact ttcttttaaa tccacatatt tgcctacaaa agcgatttta acttcattgc
     3481 ttggagctat aactcttttt accaaagagt cccaattttc catattaggt tttaaatttt
     3541 tcaaatccaa aatttcagca atagggctta aaatatcttg ctttaaaaaa ttaagtggaa
     3601 tttgataaat actagccgca tcaacacttt ctatcacgca atttttttcc accccgcaag
     3661 aaatagcaat tttatctttt aaatctctat caagagcttt ttcactacga caaataatca
     3721 tatcaggact aatgcctatg cgccttaact cgcctacact atgttgagtt ggctttgttt
     3781 ttaattcccc tgcagcctta ataaaaggta ctagagtaag atgaatattc atagcattat
     3841 ttttacccac ttccaaacgc aaagcacgaa tagcttctaa aaaaggcaag ccttctatat
     3901 ccccaacagt tccgcctatt tcaacgataa gtatatcttt gccttctcct gcttttttaa
     3961 tgcgatcttt gatttctcct actatatgag ggataacttg aatggttttg ccaagatatt
     4021 ctccacgcct ttctttttca atcacacttt gataaacccg tcctgtagta aagttattat
     4081 cttgagataa actctcatcc aaaaaacgct cataatgccc caaatcaaga tccgtttctg
     4141 ctccatcatc agttacaaaa acctctccat gctcaaaagg actcatagtg cctggatcaa
     4201 cattgatata aggatcagct tttaaaatac tcactttaag ccctgaattt tttaaaagtg
     4261 ttgcgataga agcagcggct atccctttac ccaaagaact taaaactcca cctgttacaa
     4321 aaatatattt tgtttgtttc attgataata agccttattt ttttatctaa ttatagcttg
     4381 ataaaacttt ttatttcatt agaattttaa gtaaaaaatg caagaattac aaaaaatatt
     4441 tttatcaaaa aaggaataag catgcaaatc actttacttt ttcacactcc attatctgtt
     4501 tgttctcatg caacaagaac ttgttggcaa agctttgaaa aaggcgattg cggtggcgaa
     4561 aaagataaag aacttatcga tcgcgtgggc aacaaattca aacacgcttc aaccttagaa
     4621 catctaaact atacttttta tatacaagga atttcaagag cttgcttaca agaagttgca
     4681 agacaccgtc acactagtcc tagtgtaaaa agcacgcgtt ataccttaaa agaacttcgc
     4741 aatgaagctg aatttaaaat aggagatttt gaaaatgcaa gccgttatct tgtgctttgt
     4801 ggcaatgaag aggttgataa cgcaagcatt aaagccttag aaaatttacg cactatttta
     4861 caaaaaagca ttagtctaga tatagccaaa tactgcttac cagaaagcta taaaactgaa
     4921 cttacactaa cgattaatgc aagaagtttg cagaatttca tttctttgcg tagttcaaaa
     4981 tcagctcttt gggagattag aaatttagca aatgctttat ttgaagcctt gccacaagaa
     5041 cacaaattta tatttgaaca ttgcttacat aaagatatag aataaatcat actaatttta
     5101 tcttatttaa aatattgtta tgctaccatt tataaaatca agctttacgc aagtatattt
     5161 tcatatacct tgtgcttgat tatagtttct tataaggact ttttatggat aaacaatttt
     5221 ttcaagattt tctaatgctt tcacaagctc atactataac tactcttgct atgctttgtg
     5281 ttgtttttta cgcattaaaa aaaatgcggg atataaaaat caatttttct cttcgcatgc
     5341 tatttgcgct tttaatgggt ttggggtttg gttttgcttt gcaatatttg gcaaattttc
     5401 cagatgctaa agaagcaagt aatattcttt ggtatagcga aacaaaacat tggtttgcat
     5461 ttgtaagttc tgtttttgta gcttttataa aaatgctggt tgttcctctt gtaagcattt
     5521 gcattataaa agtaattata gaaattgata aaaatatcaa aatatcctcc ttgcttggaa
     5581 taagtctttt ttggatactc tttagcacag ccatagctgc aaccttgggt atatttttag
     5641 gttatagttt tgatttagga agtaattttg ctatacatga aggaaataaa caaattcgcg
     5701 aaattcaaac tttttcaaat attatactag ggctaatacc tagcaacatc attgcagcta
     5761 ttaataaaga aaatattata gctattgtca ttttttcttt ttttatagga attagtgcta
     5821 aaaaaatttc taaaaaagaa gagtatgaac aagcctttaa aagttttcat aattttatcc
     5881 taacctttta taatattatg atgaacatga ctgctacagt tattagattt atgccttatg
     5941 ctgtagtttg tatgatggct aatgtgcttt taagcaatgg ttttgaagct atcaaaacag
     6001 ctggactttt tataatgctt atttatatag ctatgttaat aatgttcggg gtgcattttt
     6061 tacttcttgc ttcacaaggg ctaaacccta taaaatatgc aaaaaaagca tttcctgtat
     6121 ggttatttgc atttagctca agatcttctt tgggcacttt gcctatgact acttcaactt
     6181 tgcaaaataa atttggagtt aattcagcta tagctaattt tgtagcatct ataggtacaa
     6241 caacaggact taatggttgt gcgggatatt ttccagcttt agcggcagtt tttgtagctt
     6301 ttgctacaca tacacatatt gattttacat ttgctttaat gatagttttg gtagctgtta
     6361 ttggatcctt gggtatagct ggagtacctg gaagtgcaac tatggcagct tctattatgc
     6421 tagcagggat tggatttggt aataattttg tcatgctaag tttgatttta gctatagatc
     6481 ctattataga tatggcaaga acagcaagta atgtctcagg agctatgact tcggcacttt
     6541 gtactgcaaa aaatctaaaa gccctagata aagaaattta caattcttaa tctcttaaaa
     6601 cccaatattt ttcattgggt tttagtattt attggcaacc ttcacattct atgctacgat
     6661 ctgcaacatt gactttttca ctatcagggc tttcgcttct tagataataa gtagatttta
     6721 ctccaagctc ccaagcgagt tgataaattt catttaaata tcccccactt gctttatcaa
     6781 gcgataaaaa gatatttaaa ctctgccctt gatcgatcca tttaccacgc acagcagcag
     6841 cctttacaag aattttttga tcaagttcgt aggctggagt atagtattgc caagtatcaa
     6901 ggcttaaatt tggcacaaca acaggtatca taccacttaa attttgttca aaccactttc
     6961 ttttgtaaac aggttctata gtctgcgtag tacccaccaa aatagaaata gaagaagtag
     7021 gtgcaatggc catcaaataa ccatttctca taccatcttt tttaactttt tctctaagtt
     7081 taacccagtc gcattcactt tgatcaaata agccctctct taaagttaaa gctttagcct
     7141 taggacttgc tacatcaata ggaaaaatcc ccttgctcca atttgatcct tcaaaatctt
     7201 cataagaacc tttttcaaga gctaaatttg aactcgcatt aatagcctca aagctaattt
     7261 gttccataat ctcatcgatt ttatttaaat gctcatcgct tccccaataa atcttagcct
     7321 cagcaagcat ttgtgcctca cccatgactc caagacctat ggcgcgagat tttaaatttg
     7381 tatcttttac ttttctatga ggataaaaat ttaaatctat cacattatca agcatacgaa
     7441 tagcagttgg cacaacacgc tctatatctt ctttagtata cactttgcta agatttatac
     7501 ttgctagatt acaaacggct gtttttccat catttttata tttttctact atataaactt
     7561 tattaccatc aatactatct aaagttgaga tttttttggc tggtttttca tatcccccat
     7621 cgatcacaac tttttgttct tcatcaaaat gaagttcatc tccattttca aaaactactt
     7681 taatttgata ataatttggc tcggtatttt gaaaaatttc agtacataaa tttgaacttc
     7741 taataattcc tacatgagca tttggatttg ctctgttagc gctatcctta aaacataaaa
     7801 atggcaagcc tgtttcaaaa taatttagca aaattttctt ccaaagctct ttagcttcta
     7861 cgatttcttt ggtaatgctt tcatcttttt catattcttc atagcgtttt tcaaaagcct
     7921 cgccatataa atcacacaaa tccgctgtat ctgcaggatc aaaaagagtc catttatcat
     7981 tagctcttac tcttttcata aaaagatcat tgatccataa agcagggaaa agttcatgag
     8041 cacggcgtct ttcttcgcct gaatttttac gcaaatcgat aaaatcactt atatccatgt
     8101 gccaaggttc tatataaacg gctatagccc cttttctggt tcctagttga tctactgcca
     8161 cggcaatatc attagtaatt ttcaagaaag gtataatccc tcctgcggca tttttatgcc
     8221 catctatgct tccacccata gcacgcactt tagaccaatc ccaacctata ccaccaccaa
     8281 atttagaaag taaagccatt tcttgataag aatcaaaaat accttcaata ttatcagggg
     8341 ttgatcctat ataacaagag ctaagctgat ggcgtgttgt tcttgcatta gataaagtcg
     8401 gagttgcaag catgagttca aatttagaaa taagatcgta aaatttcttc gcccattctt
     8461 gaggattaaa ttcattctgc gctaaaaaca tcgcaatggc cataaacatt tgctgaggaa
     8521 gttctatagg cataccttta ctatctttaa tcaagtatct atcatataaa gttttaatac
     8581 caagataagt aaattgcata tcgcgttcag gtttaatata agcatttaaa tcatctaaat
     8641 catatttttc tttaagacca agtaaaattc ttccttcttt ttcacctttt tcaaaatact
     8701 cacacaaatg attatagcga ttcataccat taactttttt atataaatca aataaaaaaa
     8761 gtctagctgc aacaaaggtc caatttggac aatcaatatc tatcttatct actgcagttt
     8821 taattaaagt tttttgaatt tcttcagttg aaattccatc gcgaaattga atctttgcat
     8881 cgagttcaag ttcgcttaaa ttcacaccct ctaaatcttt tacagcatca gaggtgcatt
     8941 ttttgatctt ggaaacatcc aattcttctg tacgaccatt tcttttaata actttcattg
     9001 ccttccttgc tttttattta aatgttcttt taaaaattgc atcaacattt tttgtatagt
     9061 agttataatc gaaacatttt cttacatcct cttcgctcaa actttttctt aaatcttcat
     9121 cgcttaaaag cgctaacaaa aacaaacttt catttttttc attgatagca gccttgccat
     9181 tttgcaaatc tgcccaaact ttcatagcgt ttctttgaac tattttataa gcttcttcac
     9241 gactaatgcc tttaaatgga agctctaaaa gcaccctccc tgaaaataca agcccgcctg
     9301 taagatttaa atttttcatc atattttcag gataaactaa aagcttatca atcaaatttg
     9361 taagacgcat aagcataaaa tcagccgtga taaaagcatc aggcaaaata aatctttcaa
     9421 cactagaatg agatatatct ctttcatgcc aaagtgcaac attttctaaa gctggagtta
     9481 caaaagatct aagcacacga caaagccctg tgatattttc acttaaaaca ggatttcttt
     9541 tatgtggcat agctgaactt cctttttgtc ctacactaaa atactcttca gcctcataaa
     9601 cttcagttct ttgaaaatgt cttatcgcta cagcgatttg ctcacaactt gaagctaaaa
     9661 ttgcaatagc agaaataact tgagcataac gatctctttg gatcacttga tttgaaacag
     9721 gggcagcttt aagacctaaa tttttacaaa cctcttcttc aaattctaaa ggagcatgag
     9781 caaaatttcc cattgcacca ctgatttttc catagcttat cacttctttt gcatgttcta
     9841 aaagctcttt tgcatgcaaa atttcatcat accaaatagc taacactaaa ccaaaagtga
     9901 taggctctcc atgaattcca tgacttcttc ctaccattaa ggtattttta tgctccaaag
     9961 cacgcttttt gatcacttct aaaagcaaag aaacatcttc taaaataagc tccaaactct
    10021 cttttatctg taaagcaaca gccgtatcta tacaatcaga acttgtcatt gcataatgca
    10081 caaaacgact ctcttctccc aaactttcac ttacacttgt aagaaaagcg ataacatcgt
    10141 gttttgtggt tttttctatt tcgtctattc ttgcaatatc aaattttgca tttttaagaa
    10201 ttttttcgca gtctgtgtca ttaatgagac cgagtttatt ccaagctttt acagcggcta
    10261 attctacttt taaccacgca tcgtattttg cttgcatgtc ccatttttta gccatgattt
    10321 ctctactata tctttcaacc atctttgaaa cctttttagc tataatttta tattttaaaa
    10381 aacagaaatt atatcaaatt atcctaagaa agttattaaa tggcttacat aaaaataaaa
    10441 ctctcaaata atggaaaaaa ggcatttcaa gtccttatgg aaaatttaaa aattagcata
    10501 aatgaagcac aaaaactcat agacaaaaaa agactttttt gtgatggaat tttagtagaa
    10561 gaaaagaata aaattttaaa tggtttagta gagcttatag tctatgaaaa caatcccaaa
    10621 ggagtagaaa ttgtctttga aaatgaagac tttgccatac ttgaaaaaga aagtgggatc
    10681 ttaagccatc caaatggtag acattgcaaa tacagtctta gtgatgaaat ttggcatctt
    10741 tggggaaaag aagcttgcgt agcacacagg ctcgataaag aaacgagcgg acttatactt
    10801 ataaccaaaa ataaaaaagc tcaaattgat cttaaaagct tgtttgaaaa aaaactagtt
    10861 caaaaagaat accttgctct agctcatgga aaaatagaag aaaattttat agttgataaa
    10921 gctataaatt taactaaaaa ctacgatgat gtaaaaacaa gaatgcaaat ttgcaaagaa
    10981 ggaaaacaag ctatcactga atttgaaatt ttagaatact ttcctaaaat caacgctact
    11041 cttttacttt gtaaaccctt aacaggcaga caacatcaaa taagagtgca tttacactat
    11101 aaaaatcata ccattttagg cgatccactt tatgggctta gcaaacaaca aatcgaaagt
    11161 attttagatg aaaaattaaa tcctaaagaa cgcttaaaac ttacaggtgc cttgcgtttg
    11221 tgtttgcatt cttatcgttt gaaatttcaa tataaaaatc aaaattttga tatcaactca
    11281 aaaataaaca taaaagaaat tttcaacaat tccataaaat aaaatgatgt ttcactacgc
    11341 tacaatcaat cactttttta ccaaatttta aaacaaaaaa ataattcttg ctaaaacttt
    11401 aagtataatt aaataaaaaa gcgagatttt ccaatgaaat ttgttaattt tatacagggt
    11461 caaaaacaca atctaggagt actaaattct agtggaaaaa ttgtaagttt tactgatctt
    11521 ggcattgaaa ctaacgatat gaatgaattt attatctatt ttgataaatt taaacacaag
    11581 cttacagact tggattctaa aatagcctat gaaattccaa aagaaaatta tctagcccct
    11641 attatagaac ctcgccaaga tattatatgt cttgggatta attttttaga tcatgccaaa
    11701 gaatctgcca aatttaaggg tgaaaaattt gaagaaagag aatatcctgt atattttgga
    11761 aaacgctgca atcaagctac ggcacctttt ggcgatatac ctttacatgc agatgtaact
    11821 tctcagcttg attatgaatg tgagcttgca tttattttaa gtaaagatgc ttataaaatc
    11881 aaagctaaag atgcaaaaga ttatatcttt ggctatacta ttatcaatga aatttcagct
    11941 cgcgaacttc aaaaacgcca caaacaattc taccgagcaa aaagtcttga aggtagcact
    12001 ataatgggac cttatatcac aagcgtagat gaaatttctt atcctcctaa actccaactt
    12061 caaagctatg tcaatgatga actacgccaa aactctaaca ctcaattgtt tatttttgat
    12121 attgcttatg tcttagaaga acttagcgca ggcatgcttt taaaagctgg aagtattata
    12181 tctatgggaa ctcctagtgg agtaggtatg gggttaaatc cacctacttt tttaaaatca
    12241 ggagataaag tacgttgcgt catagaaaat ttaggagaac tttgcaataa aataaaaaat
    12301 atcaattatt aaacaattta ctaaaattac actataatgg cattttaaaa acttaaatta
    12361 aggcagaaat ttaccatgaa aaaaataata atgattttat gtttatctta tgcaaatata
    12421 gtctttgcag tagatatgat aacccctatt ccaaattcca tctcttatga taaagaaaaa
    12481 gctaaacttg gaaaaagtct ttatatggat aaaagtttat ccaaagatgg aaaagtttcg
    12541 tgcaatactt gccataggct tgatcaacac ggcgttgatg gacttgaatt ttcaatagga
    12601 gttgataatc aactcgataa accctttaat actcctacaa ccttgaattc tgtgtttaat
    12661 tttgtgcaat tttggaatgg cagagctaaa gatttagcag aacaagctat gggacctttt
    12721 ttcaatccaa aagaaatggg gctaagtcct gaacttcttt tacaaaaagt taattcaaat
    12781 gaaaattatg taaaaacttt taaaaaactt tatggagaag ttacggtaga aaacatagcc
    12841 cttgcagttg ctgaatttga aaaaaccttg atcactccaa attctccttt tgatcgctat
    12901 cttagcgggg atcaaaatgc tatttcagct caagctaaaa aaggttatga agattttaaa
    12961 gccaatggct gtatctcttg ccatcaaggt caaaatatag gtgggaatat gtttcaaaaa
    13021 atcggtattt ttgaagaata cccaaaccaa gaagatttag ggcgctatga aatcacaaaa
    13081 agagaagctg ataaaatggt atttaaggtt cctagtctta gaaatatagc caaaaccgcg
    13141 ccttattttc atgatggttc tatacctact ttagatgctt gtgttcagtt tatggcttac
    13201 tatcaactag gaaaattttt agatcaagaa acagttgaca atatagttgc attcttagaa
    13261 agcttaacag gagaatatca tgacaaataa aaaaagttca tttttgataa aatttattat
    13321 tttatctaca ctagttttag ctttcattct tgttttatta ggtattattt ttaataacta
    13381 ttcttcatct aaagataata aagaattgat aaacatagtt caacaactag aaatttcaga
    13441 tgaaaaaatc aattctgttt ttcaaaatag ttttaatttt atcaactacg atccaagtgt
    13501 tcaagcgata aaaaaaatgc aagaaaactt tacaaaactt aaaacttttg ggattgacat
    13561 aaacaaagca gaagaaattt ttaatgccaa actaatccag cttaattatt ttaaatccgc
    13621 aaattccata gcagtaaatt caaaacttta tttatttgaa ctagctaaaa attattttga
    13681 agaattggaa caaaaccatg aaacaaataa aaacaactat aaaacaatga actccatgtt
    13741 aagcgttctt tcaactgaaa gtattttaca aaaaacaaca ttaaatcaac tcaacagtct
    13801 tatgaaagaa atcaaaaatg atgcaaaaaa tgaaaatttg caactttttt taaaacacta
    13861 taaaatgatt gtaaagcaaa tttctattat gcaagataat tcttctattt atgaaaataa
    13921 ttcccttatg aaagagttaa aacaacttga cacttttacc caaaatacta tagaacaatc
    13981 taatttattt aaattttata tcgctttggc agtatttgga attactatcg tattatttgt
    14041 attttttatt ttattaacac taaaaaagtc atcataccaa ttcatacttt agaaaaacta
    14101 agtgctaatt tagctagcaa agaagccaat ctacattctc gtttaaacat agatccaaaa
    14161 agcgagcttg gacaaagcgc tcaatatatt aattcattta tatccaccgt tcaaaactcg
    14221 atcatagaag ccatagaaaa tgctaaatca agtcatcaaa attcacaaaa actcaaaaac
    14281 aattctatga tgcttgaaaa cagttctaat tctcaacatg aacaaattca aggagttaaa
    14341 gaaatcactc atgttttaga tgatcatatc aatcttgcgg gaaatttagc acaagaaagt
    14401 atagaaaata tgcaagatat gcacatacta atggataaag tagaacttac tctatctgaa
    14461 cttgtaaatt tgataaatga aaacaatgaa aaagaacaaa atgtagtagc caatatggat
    14521 agtctaaccc aaagtgcgga taatattata gaaatcacaa attccattaa agatatagct
    14581 gatcaaacta atttacttgc tctaaatgca gctatcgaag ctgcaagagc aggcgaacat
    14641 gggcgtggat ttgctgttgt agccgatgaa gttggacaac ttgctgataa aacaagcaaa
    14701 tctcttttaa atatcaatgc tactgttaat actatagtcc aacaaatcaa tgacaacaaa
    14761 gccttaatgg atcttatcca tgattctatg aaagaaacct cttcaaaaac caatgattta
    14821 caacaagaac ttgtaaattc tatgcataaa ttggaaagct ctatagaatc aacccaaacc
    14881 atgaaagata aaagcatgga agtaaaagat aaaatgctta tcctaggaac aaatatagac
    14941 aaagttaacg aacttgcaaa ttctgttaaa gatttatcat gcgaaatcaa taatatctct
    15001 caaaatgttc taaatggtgc ctctaaactc tccgaaaaat taagtagctt tcagtaactt
    15061 ttttcacgtt aatttaactt aacgtgaaat ttcaataaaa attttatttt taatttatgt
    15121 ttttcaagta aaattagcag tttttatttc aaaggagatg ctatggagtt tcttgaactt
    15181 ttattagttt taatcgcctt gatactgatt atcaaaaaac cagaaaaaga aaatttggct
    15241 tttggtttgg taatggtagc ttggctttta atggtttttt tctatgttgg ccacaaaaca
    15301 ggcgcactat taacaataat gaatctgtaa ggaagggcta aatgaacgaa atcaataaaa
    15361 caaaaaattt ctacacacta atgtgtttag caggcttttt gattatactc ttgcctgtag
    15421 gtattgcaaa tttgatattt ggttatatgt tgggcgatag tccttgcacg ctttgctggg
    15481 gacaaagaga agcaatgatc tttatcggtg taatggcgct tttcattgtt cgttatggta
    15541 tgaaaggtaa ataccttgct gctcttttaa tcatgacagc agtaggactt tatcaatctt
    15601 ttgctcacta tggtaatcac gctcatagag atttagatca aggttttggt ttagcagttt
    15661 ttggtatcca tacttatttt tgggctgaag tagtattttg ggctgttgta ttgctcttag
    15721 gtgtgatttt tgcttttgcc cctaaattta atgcttttga agctgaacta aatggagaaa
    15781 agtttagaaa atatactaaa tttagctttg cagcagtttt aatcagtgct atcatcgtag
    15841 catcaaatgt tttccaagcc tttgttagca caggtattcc tccttatgta ggacaaggcg
    15901 atcctgtaag atttagttta aatccaaaat acatcatttg gagtaaagaa ggttggaatg
    15961 gtttatggca aaatatttct ttcttaggaa aacgcgatgt taaagctcct gattatgctt
    16021 ttgcacctgc aagtgaaaaa cttggcataa aatttgataa tgatatcaac aatgctccat
    16081 ttgcaaaaat caatgatgag cttaaaatca caaatgaaca aaccataaat tttgacaaag
    16141 ccatcaatac tcttgattat atcaataacg aatttgtagc aagttctaaa tgggatgtag
    16201 ttttcttaga taataatttt agcgttaaag aaggttttga acttgatcct tatttttcag
    16261 cttctatcga tccaatcatc ggtatcatac cttatatgaa cgataaattc attcttatgg
    16321 gctcaaacaa atctttctta agatttgcaa aaaatcctaa tgcaagtgaa gaagatatcg
    16381 ctaaacaata cgctgacttt gtaaaaggca atgataaatt taaaggtcaa ggcgaaagtt
    16441 taggtcgcgg aagacttgat accgtaagag caaaatttaa ccatgtagca agtatgacta
    16501 cagatggaaa ttatctttat cttgcaactg ttccaaacaa caaagacgct aaaacttttg
    16561 taatctctaa agtttcttta aaagatcgtg ttctttcagg agaatttact ccaaaagcaa
    16621 atcttaaaga aggtaaaact ttaggcgatc tttatgtaac ttctatgact tttaaagatg
    16681 gggaaattta tgcacttagc aaaaatcaca atgtgattgc cgtaattgat ccagtcaaag
    16741 aagaagtagt aaaaaccatc gctttcccaa gctctatcac taatgctaga agcattttct
    16801 ttaaagatgg aaaaatcaat attctttctt atcaagatgg agcaaacaag ctttatactt
    16861 taaactaagc tttaagtcct agtgaaaact aggacttata tttaatctta tctttaaatc
    16921 ctgctttttc aaaacctctt aaacgaagca aacaactatc gcactcccca caagcttcat
    16981 cttcactctc ataacaagac caagtaagtt ctaaaggtac attttctttt aaggctagtt
    17041 ctacaatttt agctttgttt agtctaacaa gcggagtttt tatacaaact ttgaaattct
    17101 tactcgtacc ttcattgata aattcttgtg ccttttgtat aaactcatca gtacagtcag
    17161 gataaccact gccatcttct tctaccaccc ctataaaaat actctcacaa ttttcctttt
    17221 cagccaaaga tcctgctata cttaagaaaa ttccattgcg aaaaggcaca taagtgatag
    17281 gtggagtatc gcttgtacaa agctcatttt tagggatgtc tatactttta tcggttaagg
    17341 cattgccccc tatatccttg ataaaactca catctaaaat ataagatttt tctactttta
    17401 aagccttgca aatttgctta aaacattctt tttctttttc ttgagtgcgt tgttcatagt
    17461 caaaatgcaa agcgatgatt tcataacctt cttttttggc cagataagca cacaaagtac
    17521 tatccatacc gccacttatg atacaaagtg cttttttact catttttatc cttaaatttg
    17581 ctataatttc acaattttaa cgaaaatttt taaatttaaa ttgcaaaaag gcaaaagcat
    17641 gataaacata aaactcatag aacacatttt taaagccgct tctatcagtc gttggaatga
    17701 ttatccaaga atggcaaatt tggttgaact tgacaaacaa gctcataaat tcatcatcgc
    17761 atattttatc gctaaaatgg aaaaagatgt ggatatgaga gtgattatag aagggggaat
    17821 ttttgagttt ttaagtcgtg ttgtggtaac tgatatacgc cctgatgtgt atcatgaaat
    17881 cgtgcgtcaa aaaaaagctg aagttaatgc ttgggtttta agcaaaatcg aacctatgat
    17941 agaagatata gaagatgggg aatttctaaa gcgttttgaa gcgtatttaa atggtaatgc
    18001 ttatgctaaa gaaagactta tcttaaaagc agcttcatat tttgctacaa gatgggaatt
    18061 taacatagtt tatcaaacct cagctttttt aaatgatatt gatgagatta aaaacaaagt
    18121 tgaagaagaa ttagaagatt actatgagct tataggagct agaaaaatcg ctttaaatca
    18181 aaaaatagcc aaaattattg atcttagcgg aagacttcgc tttcaaaaac gttgggctca
    18241 aactccacgc ataccagaaa ccgcggtttt aggacatatg cttgtggtgg cgattttagg
    18301 atatttttac tcactaaaaa tcaaggcttg cgataaaaga cttgagaata atttttattg
    18361 tgctttgttt catgatttgc cagagtcttt aacacgtgat attatcagcc ctgtaaaata
    18421 cggcattgat ggacttcatg atatcataaa tgattatgaa atgaaactta ttaatgaaag
    18481 aattttaccc tttgtacctg agggtttaag ggctgagttt tcttatattt taggcattag
    18541 agaaggtaga aacggtgagt caaattttgt aaaaaatgag tttgaaaatc gcacttataa
    18601 aaatgctaaa atcgagcttt gcagcggaag tttaagctct tttaatgaaa atgaatttgg
    18661 tgctatagat ggtaaggcgc ttaaatactg cgataaaatt gctgcttata tagaagcagg
    18721 acttagtata agttatggtg taaagtctaa agaacttgaa agtggttttt taggaatgca
    18781 tgagtttttt aaagaaaatc ctaccataga tggggtgaat ttttttgaaa tttgcgaaag
    18841 tttaagagaa tattttaaaa tttaaataag atttttatac tcctattttc aatatgtttt
    18901 aaataaaaat attataaatt caaattttat tttgtataaa acataaagga gttattatga
    18961 aaaaatactt tcaaaagcgc tatactttag ccttttttat aggtatatta gcgggtattt
    19021 tcggagctat tgttaaatgg ggttgggaag taccttttcc tccaagaaat cccaatgttt
    19081 tttggccagc agatgcttta gaacgtgtta ctccacctaa aatttttcta gaacaactag
    19141 gcttacctac tgattggact tatatgtttt caggtatgca aatgcctttg tcaattttta
    19201 tagtacatgt cggtttttct attatttttg gagtggctta ttgtatgata gcggaaaaat
    19261 ggcaccgtat tactatgtgg caaggtgcag tttttggatt ttttgtttat ctttttgccc
    19321 atgttattgt aatgccttta attgcagaag ttccaccact ttctgaaatt ccttttgatg
    19381 aacacctgtc tgaaattttt ggccatattg tttggctgtg gggcatggaa atagttcgta
    19441 gagatataag aaatcgtata accaaagaaa tagaagaatg aaaggaagcc tttcattcca
    19501 tatctaaaac cgcaccttta ctagcattgc taacaagttt ttgatacatt ctaagccatc
    19561 ttgaagacac ctctttttga ggcaatgcaa attctttttt acgtttagca atttcttctt
    19621 cacttacatt tgcatggata gtataagcat ctacatcaat ttctatttca tctccatctt
    19681 ttaaaagtcc tataagacca ccttcagctg cttcagggga aatatgaccg acgcttaaac
    19741 cccttgtagc cccactaaaa cgaccatcgg tgattaaagc tacatcagca cctaaaccca
    19801 tacccattaa aagtgaagta ggacttaaca tttcttgcat accaggaccc ccttttggac
    19861 cttcatagcg tattacacaa acatttcctt tttgcacctt gcctttaata atgcctttta
    19921 tagcttcatc ttgagagtta aaacaaacag ctttgccttt aaattttctt tctccgatta
    19981 ttcctgcggt ttttataacg caaccttgct tggctaaatt tccaaacaaa atggcaagcc
    20041 cacctacttt tgagtaagca ttatctactt tacgaatgat attttcatct ttgattttgg
    20101 cattttttaa gcgttctttg agactttctc ctgtaatggt cagtgcatca agttctaaaa
    20161 tatgtccttg tctgcttgaa atttcagcta taactgcact cacaccgcct gctttgtgga
    20221 tatcatccat ataaacacta tttagcgatg gggctatttt tgctatgtgt gcaactttgc
    20281 ttgagatgaa atttaaatct ttaatatcta gtgctacccc tgcttcacgc gaaatggcaa
    20341 gcatgtgtaa aactgtattg ctacttccac ccattgccat atctactacc atagcattac
    20401 gcacagcttt ttgagtgatg atattacgaa ttttaaaacg ttcatctagg gcgatttcac
    20461 aaatacgacg tgctgctttt cttaaaagct cttctctttc tttacttaaa gctaaaatgg
    20521 ttccattgcc ttctagtgct atacccatag cttcgcataa ggtattcata gaatttgctg
    20581 taaacattcc cgaacaagat ccaccacttg gacaggctga acattctata tctttaaatt
    20641 cttcttcact aatttttttg gattcataag cccctacagc ttcaaaaaca gagctaaggc
    20701 tgatcttttc tccttttttg gttactcctg aagccatagg cccaccactt acaaaaatgg
    20761 ttggaacatt gacccttaaa gctcccatta acataccagg agtaatttta tcgcagtttg
    20821 gaatacagat taaagcatca agttgatgag cattcatcac cgtttcaata gaatttgcga
    20881 taagttcacg acttggtaaa gaataaagca taccttcatg tcccatagct ataccatcat
    20941 ctacgcctat ggtattaaac tcaaaaggta cgcaaccatt tttgcgtatc tcatctttaa
    21001 tgattttagc ataatcattt aaaaaataat gccctgggat tatatctata tagctatttg
    21061 ctacacctat aaaaggtttg tcaaaatctt catctttcaa accacaagca cgaagtaaag
    21121 aacgattagg tgctcttaaa tgtccttttt ttatcgcatc gcttctcatt gtaactcctg
    21181 ataataattt tttaaaatta tatttagcaa agcttaattt ttgtgaaatt tattttgata
    21241 tacattttca taaatgataa aaattattaa ttgacaaaaa tattttttta taatacaata
    21301 ctttttgata atcaaaaaag gagtcaaaat gagacaatat gaaacctata aatgccaaaa
    21361 atgtggcaat gaagtagaag ttcaaaatgt aggtggcggt aagcttagtt gttgtggtga
    21421 agaaatgaaa tgtatcacta cagatttaac tgcagtaaat ttaatgaaag cttttgcagg
    21481 cgaatctatg gcaagaaaca aatacgattt atttgctgat gtagctgaag aagaaggttg
    21541 gcatgcggtt gctagacatt ttagagaagc ggctgaaaat gaaaaatggc atgcaagagc
    21601 agaatttaaa gcttatcatg aaatcgttga tggcaaacct ttagaagtaa ctacaaaaaa
    21661 cctagtaact gctgcagaag gtgaaaacta tgagcacaca actatgtatc caaattttgc
    21721 aaaaatcgct gaagatgaag gcaaaaaggc tatagcgaga ttatttacag ctattggtaa
    21781 agtagaaatc gaacacgaaa gagaatatct agcgcttaaa aaaatgctcg aagaagaaga
    21841 attttttaat agtgaagtag aagaattatg ggtttgtgaa gtatgcggac atatacatcg
    21901 tggcaaaaaa gctccagcag cctgtccttt atgtaaagca ccaaaagagt attttaaacg
    21961 cgaatttttg ggttaagtta agaaattctt atccttttta agataatatt ataattattt
    22021 tttaataaaa ggataagaaa atgaaaaaat tactattttt attttttgct ttaacagctt
    22081 ttctctttgg tgctgtaaat atcaacactg caacactaaa agaattaaaa agtttaaatg
    22141 gtattggcga agctaaggct aaagcgattt tagaataccg caaagaagca aattttacaa
    22201 gtattgatga tcttaaaaaa gttaaaggca taggtgataa gctttttgaa aaaatcaaaa
    22261 atgatatcac aatagaataa aagggcattt ttgcccttct ttttagaaaa atttgaaaac
    22321 tttatttgac acaaaagaac ttttaaacga atttgatata aatttaatcg gtattgatga
    22381 agcaggacgc ggtgctttag caggtcctat gatgatggca gcttgcaaac tgaacaaaca
    22441 acttgatggg ttgtgtgatt ctaaaaaact aagcgaaaaa aaacgcgaag aactttatga
    22501 aatcatcatc aaaaattcaa actatctcat acttgctttt tcttcagaac aaatcgacgc
    22561 actaggctta agcacttgtt taaaaaaagg cttaaaactt ataaaaaagc attttaaaac
    22621 agaaaataac ttcttatatg atggaaacac caacctaggt ataaacggga taaaaacaca
    22681 aatcaaagcc gatgctagca ttttgcaagt aagtgcagct agcatacttg caaaagttag
    22741 taaagatagg gtgatgaatt tcttagctaa agactttcct tgttatgaat ttgaaaaaaa
    22801 caaagcctat ggcacaaaag ctcataaaga acttatagct aaatttggaa tttgcaaact
    22861 ccaccgaaaa agttttaaac ttttatgatt attttgctaa attttgatgc aaactcaaag
    22921 cacattctat accatctttt atagcccaaa caactaaaga ttgtcctttt ctagcatctc
    22981 cgcaagcaaa gattttttta tgagtggttt ggaaattttc tgtgcttatg ttgtttttct
    23041 catctaattt cactccaaaa tttttagcga tagcttcttc gcacccgcta aaacccatag
    23101 ccaaaagcac taaatccgct ttataagttt ttttagaatt tggaatttca acatttatag
    23161 ccttgccttc tttaaactcg cgttttaaat catttgcttc aacaccttct acatgagttt
    23221 ttcctaaaaa tttctttgtc attttttgat attccctagg atctttgtca tatacagcaa
    23281 tggcttcttc taaaccataa tcagtagtaa aaatgtcagc ttttaaaggc caaggattgt
    23341 tttggcttct ttgcaaaggt ctttttggac ttctttcaaa acgcactata gatttagccc
    23401 cttgtcttgt cgctacagcg atacaatcca cacttgtatc cccgcttcct ataaccaaga
    23461 catttttacc tttggccata tctgcaccct tgcctgtttt taacaaagtt ttggtatttt
    23521 gcgttaaaaa atcaagggca aattcaaccc cttttagctt tctaccttct atatcaagat
    23581 ctataggctt acttgctcct gtacaaagca ccaaagcatc aaattctttt agaagttttg
    23641 aaaccttatc tttgctgtct atattttcat ttactttaaa ttcaatccca ctttttttaa
    23701 gcaaatccac ccgtctttga actatacttt tatcaagctt catatcaggg atgccataca
    23761 tcaaaagtcc gcctatttta tcgcttcttt caaaaacact tactttataa cctagtgaat
    23821 ttaaagtatt ggcacaagca agcccagcag gcccacttcc tatgacagcg atttttttgc
    23881 cattgtattg cttaggttta tttactctta ctaaattttc cttaaaagca ttttctataa
    23941 tggataattc attatttttt atgctcacac taacaccatt tatcgcacac acacaagaat
    24001 cctcacaagg agcagggcaa acacgaccgg taaattcagg aaaaggattg gtaagatcaa
    24061 gtctttcata agcttctttc cataaagaac gataaacaag atcgttccat tcaggaatga
    24121 gattgtttaa aggacagccc acatcttttc cttcgctcat cacacccgta tgacaaaaag
    24181 ctaccccaca atccatacat cgtccacctt gaacttcttg ttctttttta tccaaaggta
    24241 tagtaaattc tttgaaattt aaaacccttt ccttaggagc aattttttta aaatccattc
    24301 ttttaaagtc taaaaaacct cttgcatttc ccatttttac tccttattta atatactttt
    24361 tagcttgtct ataataattt tttttctttc ttctataaaa ttattaaaat tttccaaaga
    24421 taaatcaaca tcaggaatta agtgttttcc taaaaattcc tttctatttc cattacattt
    24481 ttcatttacc cattgcttta aaggtttgtt atttttagat tcattttcat ttgcatcaag
    24541 catttgtaaa tttggtaaag aatcataaat attaaaagaa atacaattat ctgtagcttt
    24601 ataaagtttt tcatattctt tatatgcgga ctctggatgc aaatgatctt tatgaaaatt
    24661 attattttta taatctaaat ttggataaag taaagataac acagcaaacg cttcaggact
    24721 atttttacgg cattctatga cattattttc taaatattct tcatctattg tttgtatata
    24781 ttttgcctct ttttcaattt cttccaatgg aaataattct atttctctat caaaaaagcc
    24841 actattttgc ttaaaatctt taataaaagc tttacgcatg ttagacaata ccgtatcact
    24901 acttccacca aaaggcttta aaataattgc ccttaacaac cattttttta ttatagctct
    24961 attttcatta cacttgacag aatctactat attatttgtc aaatttttat gataaataaa
    25021 atataaaatg ggtaaaatag cattatttga tgaaagtgtt tttgcttcaa atccaaaact
    25081 tctaagcaat ctaaatgttt caataaaagc attttttatg ccttcccatt tagcttctat
    25141 ggattctata aaatttttat caaaactatt gatttgaaat ttaatattgt tatggaataa
    25201 atataaaaat cctttaagga ttaaatcttt agagatatcg aaattttcat taattttatc
    25261 tacaagatta tttatttctg ttcttgcatc aattttattc caatttgcaa tagcaatact
    25321 aaataaaata tcagaataat caagaggctc accatttgaa ttaattctaa taaaaatatt
    25381 aaccgcttta tctggatctt gttcttcttc taaatagaaa ttaattaaat tcttatcaaa
    25441 tatcttttga tgcaatagat ctaatctatc ttcttcattt tcgtttaaac taaattcttt
    25501 tgctattttt cttactcttc ctgaatcata ttgatataaa tactgacact taaaccattt
    25561 ttgctgatat ttatcaatat aaatattttg ttcttttgtt tctaatttat caagccataa
    25621 aaattcatat tcaatatttt cattttctgg tttcttgctt tgagtgagat taaaataaaa
    25681 atgacaaatt ttaaaatatc tatcattgtt ctcccattta ttatatgatc tgtgaatatc
    25741 ataatttcca aacaaagcaa aataaagcga agttaatctt tgttgtccat ctaaaatcgc
    25801 ataaaaatct ttatggtttg aggtgttaaa ataatcatta tgcgtatgat acgattcacg
    25861 ataatattct aaaaatctat aaaatttcca agctgtcttg ctttcatctt ttactttcca
    25921 aaaaagcata gaacttatag gatatcctcg tattagtgaa tcaaataatt cttctatctg
    25981 ccaaggctcc caaacatact ctctttgaaa tgctggaagt aaatattcat tgttttttat
    26041 tctttgcatt gcttcattaa ttgttattgg tgattgaaat cctgccattt ttactcctta
    26101 tttttgtgtg attttcaaaa atgctgctaa atttggatct ttttcatttt tacaaagatc
    26161 aagcattttt aacatctttt cataatctct tggcatgact ttaaaaaagt cttttttatc
    26221 gaatttttct aaaatatctt tagccttttt agaatctgta taagtgatat gtttttctat
    26281 cacagctttt aattcttttt catccttagc attaagatct ttaatatcca caagctcggt
    26341 atttacatga gcttcattgt gtcttccaaa gatataaaca acgcccccac tcataccagc
    26401 agcgaaattc gcacccacat ctccaagaac tacaacttgt ccacctgtca tatattcaca
    26461 accatgcacg cctgttccta aaaccacagc caaagcccct gaatttctta cacaaaatct
    26521 ttcccctgct ataccatcta aatacacttc accttttgta gctccgtata aacaagcatt
    26581 tcctgcgatg atattttctt caggtgaaaa agtggcttca tttgaaattt ttgctatgat
    26641 tttaccacca cttaaaccct tgcctaaata atcattgcta tcgcctataa tctcaagttt
    26701 aatgcccttt aacaaaaacg ccccaaagct attgcctgca ttgcctatag ctttgatatg
    26761 gatactatct tcatctaaag catcttttcc ataagttttt aaaatttcac ttgaaagcat
    26821 ggttgcaaaa gtacgacttt gatttcctac ttctaaagaa agtttgatag gctctttttt
    26881 ctccacagca tttttacaaa gcggaagtaa aattctataa tcaatcgttt tttcaagctt
    26941 gttatcttta tagtctttaa aatgcacagc ggttctatta taagtaggca aggattttaa
    27001 aattttatcc aaatttagct ttcctgcttt accttgcaca cttttttggc ggagtttatc
    27061 cacacgacct atcatatcat ctaggcgttc aaaaccaagc cttgccatgt attctctaag
    27121 ctcctgggct ataaaataca tgaaattaat cacatcatcc actttgcctt tgaaacgatc
    27181 tctaagttct gtatcttgag tggctatacc aaaaggacag gtatttagat gacaaactct
    27241 catcatcgta caacctaaaa caatcaaagg cgcggttgca aaaccaaatt cttcagctcc
    27301 taaaagtgct gctatggcta aatcacgccc attcataagc tttccatcag tttctaatct
    27361 taccctatct ctaagcttgt ttaaaatcaa agtttgatgt gtttcagcca aacctaactc
    27421 ccaaggaatt cctgcatgcg gtatagaagt tctaggactt gcacctgtac ctccatcata
    27481 acctgaaaca aggattaaat tcgctcctgc cttagctaca cctgcagcaa ccgttcctat
    27541 gccattttcg ctcacaagtt ttactgaaat ttttgcatct ttgttagcat tttttaagtc
    27601 ataaatgagt tgagctaaat cttctataga ataaatatca tgatgaggag gtggggaaat
    27661 aagcgtcaca cctgcagtag aatgtctagc cttagctatc caaggataga ctttaaagcc
    27721 cattaattgt ccgccttcac ctggttttgc gccttgagca actttgattt gaatttcttt
    27781 tgcatgactt aagtagttta aatccacgcc aaaacgccca cttgctactt gcttaatggc
    27841 tgagttttta tccacaccct ctttgatttc atagcgttct tcatcctcgc caccttcacc
    27901 tgaatttgat ttagcaccta ttttattcat agcctgtgct aaacactcgt gtgcttcttt
    27961 agaaatagaa ccataactca tcgctcctgt tctaaagcgt ttaactatac tttctacact
    28021 ttcaacctta tctatactga tagcttcact aaaatcaaat tccatcaaag aacgcaaatt
    28081 aacttgtttt tcatctacta aagccgagta ttttttaaag cttttatagt ctttgttgcg
    28141 acaggcttgc tgaagattaa aaatcacaag tggatcgatt aaatgttctt ctttagcact
    28201 tctaaaacca tgaattcctt tagaatctaa agccttatgc gtatcgttaa aagcatgttt
    28261 atgtaaagca atgagctctt tttcaaaatc ttctaaatcc ataccttcaa tgcgtgaagt
    28321 tgtagaagtg aagtatttat caatcacttt agagcttaag cccagacatt caaaaagtgc
    28381 agagccatta taactttgca aggtagaaac tcccatttta gaagcaattt tgactatgcc
    28441 acttgaactt gccttgatga aattttctac cgccttttca taacttaaat ttaaatcttt
    28501 attggcaata agtttttgta tgctctcata aaccaaataa ggattaataa cagtcgcacc
    28561 ataacctaaa agacatgcaa aatgatgaat ttctctaggt tcaccacttt cgatgataag
    28621 acttgtatgt gttcttaaat tttttcttac tagatgatta tgcactccag aaacagcaag
    28681 caaagcaggg atataagcgt ttttttcatc cactccttta tcgcttaaaa tgataataga
    28741 aacacctttt ttaacctcat cttctatctt aacgcaaagt tcatctaaag ccttttctaa
    28801 agttttttta gaataatcat aaagtataga aaattcttta acttgaaatt tatttaaagc
    28861 cttaacttca aaaagttctt cattgcttat cacaggcaag gctattttta cgcgttttgc
    28921 attgttttca tcgggtttta ataaattgcc ttcgcttcct agataaatcc ttgtagaagt
    28981 aacaatctct tctcttatgg catcaagagg aggattagtt acttgtgcaa aaagttgttt
    29041 aaaataatta tacaaaggtt gataagtttt agaaagtata gccaaaggag tatctacacc
    29101 catagctgct atagcttctt taccattttg agccatagca gccacgctca ttttaagctc
    29161 atcataactc caaccaaaag ctttttgaag ttttaaaacc tcatcttctt ttaaaaactg
    29221 atgtttataa actccgcttt tttgtttttc aagttcaact aaatttttaa gccatttttt
    29281 ataaggctta gcattagcat aatgctcttt gatttcatta tcagctataa ccctacctct
    29341 tgctgtatca acgagtaaaa gttttccagg ttctaagcgt tttttagctt tgatattttt
    29401 ttcatcaagt tttaaagccc ctgtttcact tgaaagtatg agcatatcat cttttgtaag
    29461 ataatacctt gaaggacgaa aaccatttct atccaaactc gcccccataa tcactccatc
    29521 agtaaaaact atagcagcag gtccatccca aggctccatc aataaagaat gatattcata
    29581 aaaagcacgc tttttgcttt ccatattttc atttttatgc caaggttctg gcaccatcat
    29641 cataaaagct tcttctaaag tgcgaccatt tagagctaaa aattctaaag tattatcaaa
    29701 cattgcagaa tcactgctag gtttagctat gatgggaaaa atttcatcta aattttcaaa
    29761 atactcactt tgcatcaaac cttctctagc tcttatacta tcaacatttc cgcgtatggt
    29821 attaatctct ccattatgta ccatatagcg gtttgggtgg gctctttccc aacttggaaa
    29881 agtattagtc gaaaagcgag aatgcaccaa agcgatggct gatttcatat tgacatcttt
    29941 aaaatcaaga taaaaatcgc tcaattgagt tgaaagaagc attcctttat aaactatggt
    30001 gcgtgaagaa aaacttgaaa aataaaattt tggcacatta atagctcttt tttctataag
    30061 tcgacgcgta ctataaagca ctctttcaaa ctcaagtcct gcacttattt tacttggttt
    30121 ttttacaaag gcttgtaaaa aataaggcat agcttttaaa gcacttgcac ctatatcgct
    30181 aggattaaaa ggcacttctc taaaacctaa aaattcaagt tttttatcct ttaaaccttg
    30241 taaaaatatt tcttttgctt cttcttttgc atcagtattg ggtgataaaa acatctgtgc
    30301 tacagcataa tcaccctttt taggaagttc aaaacccaat tcttgagttt taaaaaaatc
    30361 atgtggaatt tggattaaaa tccccgcccc atcacctgaa ttttcttcag ctcctgcacc
    30421 acctcggtgt tcaagattca tcaaaatttc taaagcatca caaataacct tataagaagc
    30481 aataccgcgt atattagcaa ctgcagcgat accacaggca tcgtgttcgt tctttgggtg
    30541 atataaacct atgctttgat tattttctag gatattttct aaatccattt tgctctcctt
    30601 ataagactga tttaaatttt gttagcttta taaggattat agcatacatt tttttaaaat
    30661 cgatataatt tttatcttaa aaataaataa attaaaaaat attttgatag atttgcaaaa
    30721 attataaaaa catggcgata atactaccca aaatcaataa tggaccatta taaaaaataa
    30781 aagttggtat gcaagtatct ttaatgtgat cgtgttgttt atcagcattt aatcctacag
    30841 tagttcccat ggttgtttca ctggctggac ttcctgcatc tcctaaagct cctgctactc
    30901 ctaagataaa tataataagt gctgtactaa aaccaagttc caaacaaata ggacaaaaaa
    30961 gcgtagctat gataggtata gttccaaaag aagtacctat acccatagtg atgataagtc
    31021 ctattaaaag catgaaaaat actgctaaaa atttactttg ctccatccaa ggaacgactg
    31081 aatttacaag atctactact gatccacttt cttttaaaac ttctccatat cctgcagcaa
    31141 caaggataac aaaagctata aaacccatca ttttaagccc atcatcaaaa acttcattga
    31201 cttttgaaaa ttcaactcca cccaaaataa ccattaaaac aaaacccaaa agccctgata
    31261 aaggtaaatt catagtcaaa atttgcaaaa ttaaagttaa aacaagccca gctaaaacgc
    31321 cccattcctt acgcgtcatt tcaagatttt ctaaatccac tttagcaatt tctacttctt
    31381 gatactctct tggcttacga taaaacacaa aaagcgctag aaaaagtcct gctatcatac
    31441 aaatagcagc gaaatacata gtatttgtaa catcatttaa agatgcactt acattatttg
    31501 catttaaatt atcttttaaa agatcttgaa aagtaagccc aaaacctact ggcaaaacca
    31561 tataaggcgt agtaagtcca aaagttaaag cacaagcaac cgctctacga tcgattttaa
    31621 gtttattaaa aagacttaaa agaggtggaa tcaacaaagg tataaaagct acatgaatag
    31681 gaattaaatt ttgagaaaaa caagaaatca aagctataga caaaagcaat aaatattttt
    31741 tatgagatat aaaatgactt actatcttaa tcaaatatgc agttaaattt gtctttgaaa
    31801 tcgctgcggc aatggctcct aagagtatat agctaagagc tgtttttaaa ttttctttca
    31861 ttccgcttat aagtatattc atagtatcta cgagttcaag atgagaaaat acacctgcaa
    31921 taagagctga gatcaaaaga ctcaaaagca cattaaaacg aaacaaacaa agtaaagtca
    31981 tcaaaacaac actgataatg ataggattag taagtaaagt caaaatcatt ccttaaataa
    32041 ttttaaaaat ttaattgtag aaaaaactta gttaaaatgt aataaaactc gaacatatga
    32101 tgat
//
LOCUS       DAPIWB010000010        31795 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.010, whole genome shotgun sequence.
ACCESSION   DAPIWB010000010 DAPIWB010000000
VERSION     DAPIWB010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 31795)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31795)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31795
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.010"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            15..3503
                     /locus_tag="RJ266_000383"
     CDS             15..3503
                     /locus_tag="RJ266_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HDV7354164.1"
                     /translation="MIQKALALAEELQGQIEANISNSEKEFHAKMQKLLNNPKNKVML
                     IELLDRSFRCKDKNASFELIEYTLSKYGIADFFSTFEKFLLFSFLNFGKFAPNLSVPF
                     FVKHLREDTKAMVLDANPSVLEPHIKKRKEQDKITLNVNLIGEEVLGEAESKYRMQKY
                     EEALKSSYITYISIKITTIFSQINIIDFNYSKEEVVKRLDYLYALALEEEKKQGVSKF
                     INLDMEEFRDLELTVAAFMESVAKFDIKAGIVLQAYIPDSYKYLKKLFAFSKERVLKG
                     MKPIKIRFVKGANMESEETIASQRGWELPTFYKKIDTDSNYNKMLDFILEGDNYKYIN
                     IGIASHNIFEIAYAYTRISEVGALDSFTFEMLEGMSLQCSYELSKMHDLILYAPVCDE
                     AHFNNAIAYLVRRLDENTSEDNFMRYFFNLKVGDKNWNIQKELFLKSLEGIKTLDNTT
                     HRKQDRNKESNIISSYESKKFSNESDTDFILAQNRAWAKEIKTKYENLKDYDVYPVIG
                     ELDFKAENLNVLEVKDKIEDRVIGKAYLAGEKEIKQALEVAKNSKFTQKSHDEIYQIL
                     AKSAKLMRERRGDLIGLAALEVGKTFLEIDPEVSEAIDFIEFYPHSLEELKKQNPKVT
                     FTPKGIGVTIAPWNFPIGISVGTIAAPLAAGNVVIYKPSSLSTLTGYMLCKCFWDSGI
                     PKDALIFLPSKGSDISKYLLIDEAIKFSILTGGEDTAYAMLKANPTLLLSAETGGKNA
                     TIVSKFADRDSAIKNIIHSAFSNSGQKCSATSLLVLEEEVYHDEEFKKTLVDAASSMA
                     VGNPFEFKNKLGTLADKPSSKVQKALDELQPYEEWALKPKFLEDNPYLMTPGIKYGTK
                     KGDFTHMNELFVPILSVMKAKDLKEAIDIVNSTGYGLTAGFESLDEREWEYFHTHIEA
                     GNIYINKPTTGAIVLRQPFGGIKKSAIGLGRKVGIYNYITQFLEIKQEDFDDHLIEDK
                     FSKKLAQIDLKEAQDFMNNLIKMSQSYAYHYKNEFSVSKDYVNIRGEDNLFSYTKIKN
                     MVLRLCGNESLKDVLGVVLGANIANIDLSISYDEQDVSMIERIVQSIGAKVLFLKENK
                     ENFIKSIKEYERVRYLAKPDVNDEIYKEAAKLAKIIIREKPLLNGRFELLNYFNEKAL
                     SISFHRYGNLGIRAIS"
     gene            3521..4990
                     /gene="putP"
                     /locus_tag="RJ266_000384"
     CDS             3521..4990
                     /gene="putP"
                     /locus_tag="RJ266_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HDV7354165.1"
                     /translation="MEVVQINTPIAVMFVVYALLMLYIGFYFYKQNKNSEDYFLGGRT
                     MGPVISALSAGASDMSGWLLMGLPGALYVSGFIDSYIAIGLTIGASLNWIFVAKRLRI
                     YTSVIANSLTIPDYFETRFDDDKHILRIVCAVVILIFFTFYVSSGLVSGAKLFESTFG
                     IRYDYALTTGTIIIVAYTFLGGYKAVCWTDMIQGLLMMMALIIVPLVMLYHLGGFGEA
                     MNIVREIKPQALSMGEGVGIVSIISALAWGLGYFGQPHILVRFMSIRSTKDIPMATFI
                     GIAWMAVCLLSACMIGILGIAYVHKFELSLQDPEKIFIVMSQLLFNPWIAGILLSAIL
                     AAIMSTASSQLLVSSSTIAEDFYKKIFREDAPSHIVLNLGKLGVLLVAVIAFLISTDK
                     NSSVLSIVSYAWAGFGASFGSVMLFSLFWSRMTRVGAILGMITGAATVVLWKNFANSG
                     LYEIVPGFLVASAVIIIASLFTNVRSGTKAAYEKMLKEL"
     gene            complement(5006..5233)
                     /gene="yedF"
                     /locus_tag="RJ266_000385"
     CDS             complement(5006..5233)
                     /gene="yedF"
                     /locus_tag="RJ266_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HDV7354166.1"
                     /translation="MKITYSLNLQGEACPYPAIATLDVLPKLKSGEILEVLCDCPQSI
                     NSIPQDVKNRGFKVLEIDQSGPTLRFLIQKP"
     gene            complement(5237..6445)
                     /gene="yedE"
                     /locus_tag="RJ266_000386"
     CDS             complement(5237..6445)
                     /gene="yedE"
                     /locus_tag="RJ266_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
                     /protein_id="HDV7354167.1"
                     /translation="MNSFKQKYLINFWDNPRSMIALGILSAVYFGIFGGVWAVTGEMT
                     RWGGEFLELLGMNLDGYSYYQKQNLNGTPLTRTDGIMLIGMFIGCLVAALLANKVKFR
                     LPASNIRIFQAIVGGILSGYGARLAFGCNLANFFTGLPYFSLHTWLFTVFMVLGIYLG
                     VKICNTSFFKPKAKLERVNKENLPLNKQSLRTKLYFNLGILLFIAFLVWVFYLVFTNG
                     NISTQNKQSLLALALIFGFVFGFVISRGQICFTSCFRDLFLFGRDNAIKGALIGMIIA
                     SLIAFAFILQGHTSKLIELSPAVAVGAFLFGFGIVFAGGCECGWTYRAFEGQSHFIIV
                     GIANIIGTMILALSYDFLPKAFKEGIKINLLTEFGNLNGFFINLILFILMFVFVVFYK
                     KHFFKNQLKG"
     gene            6585..6682
                     /locus_tag="RJ266_000387"
     tRNA            6585..6682
                     /locus_tag="RJ266_000387"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6619..6621,aa:Sec,seq:tca)
     gene            6710..7960
                     /locus_tag="RJ266_000388"
     CDS             6710..7960
                     /locus_tag="RJ266_000388"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HDV7354168.1"
                     /translation="MSKADIIVGIQWGDEGKGKVVDKLCENYDFVCRSAGGHNAGHTI
                     WVNGVRYALHLMPSGVLHPRCINIIGNGVVVSPEVLIAEMAQFENLKGRLYISDRAHL
                     NLKHHSLIDIAKEKLKGKNAIGTTGKGIGPSYADKINRTGHRVGELLEPQRLCEALIK
                     DFEANKTFFEMLEIEIPSAEELLADLKRFNEILTPYITDTTRMLWKALDEDKRVLLEG
                     AQGSMLDIDHGTYPYVTSSSTISAGALTGLGLNPKEAGNIIGIVKAYATRVGNGAFPT
                     EDKGEDGEKIAQIGKEIGVSTGRKRRCGWFDAVAVRYTARLNGLDALSLMKLDVLDGF
                     EKIKICRAYEYKGMEIDYIPSDLENVQPIYEEMDGWDKVFGIKDYDLLPENAKKYIAR
                     LEELAGVKVKYISTSPERDDTIIL"
     gene            7957..8385
                     /locus_tag="RJ266_000389"
     CDS             7957..8385
                     /locus_tag="RJ266_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar FliJ family protein"
                     /protein_id="HDV7354169.1"
                     /translation="MKSKYNSVVKVRKQQLDKAESNLNQAKQRQLEHEKAYELSRQEC
                     ESLGVLPKSGSIAELRSNLSMAQVGREALARAKEKVELSKKEMNHYQFLYQKAHLDYE
                     KMKVLEAEEIKQKQKELAKAEEKFLDEIAISRFFKGEKDD"
     gene            8378..8896
                     /locus_tag="RJ266_000390"
     CDS             8378..8896
                     /locus_tag="RJ266_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotE family protein"
                     /protein_id="HDV7354170.1"
                     /translation="MIKKFILLVFISSVVFGAEQDCEQYFEARKAQIELQTREFDEAR
                     QSLEAYKASFEALQKERLENLEKKEAEVNATLAKIEELKLENARLVEKQQKILNSIND
                     KTQGRVKEIYSQMKDAAIADVLSQMDAEDASKIMLSLESRKISGVLSKMDPKKASELT
                     LLLKNLDNNASN"
     gene            8989..9540
                     /locus_tag="RJ266_000391"
     CDS             8989..9540
                     /locus_tag="RJ266_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF507 family protein"
                     /protein_id="HDV7354171.1"
                     /translation="MRIKLPHIPYIANKMMLDIANSSFVEIKDQLEKLKVCIIEVLEK
                     DILNERKLDERVKELLEQQEDEMELMQVDRKNMFWLVKKKLAPEFNVILDSEDRHNHL
                     AHQILEELVENDYINFIVSENRVKNLIFSSIESYLKIYEKLEDEVYEKISNYKTKPIP
                     GSEEYDLIFEKLYQEELRKKGMF"
     gene            9540..10658
                     /gene="carA"
                     /locus_tag="RJ266_000392"
     CDS             9540..10658
                     /gene="carA"
                     /locus_tag="RJ266_000392"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HDV7354172.1"
                     /translation="MKAYIYLENDIFLSAKAFGKSGTFFGELVFNTSLTGYQEIISDP
                     SYAGQFIVFSMPEIGIVGTNENDNESKEIFASGVLMRELSSSFSNFRAKESLQDYLEK
                     HGKIGIYELDTRYLVKMIRNNGNLRAVISTEISNKEDLKIALEKSAKIDEVNFVKEVS
                     TKKNYSHKQGVWNASFQKFNDAKRSEKKVAVIDYGVKTNILNELVEVGFEVEVYPYNV
                     KADELITLYKKGEIQGVFLSNGPGEPRILKQEIAEIKKLAEAKIPMLGICLGHQLLSN
                     AFGYETYKMKFGQHGANHPVINLDTKTVEITAQNHNYNVPEELAQVAHITHRNLFGDN
                     VEGVRYKDYPIISVQHHPESSSGPHESKYIFKEFMNLM"
     gene            10655..11314
                     /locus_tag="RJ266_000393"
     CDS             10655..11314
                     /locus_tag="RJ266_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDV7354173.1"
                     /translation="MSIDFLAIISVAFLSSFGHCYSMCGGFNLLFINLNSKSNNLFLL
                     TFIYNLFRIFAYIVLGIIFGTFGNILAINAKVQSLSFFILGIFMMILGFALIFRGNML
                     SFIENNVFFDSFVKKIIKKSKNFKGLKSAIFLGFSNGFVPCGLVYFFIANAMSKQNIF
                     EGILVMMIFGISTLPAMLFFSKISQFFSDFLKNLFNYLSYGVIVCYGINLAYIGFKAF
                     Q"
     gene            11311..12522
                     /locus_tag="RJ266_000394"
     CDS             11311..12522
                     /locus_tag="RJ266_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HDV7354174.1"
                     /translation="MKDFFKDQFFKALEKNTIFSRADVQGNLIFVSDKLCQISGYSKK
                     ELIGKKHSIFKHPDVEECYIEELLKKLSYKKPYQVIFKNIDKLGKTFYLETLLIPILD
                     KNNELIEIVAFSHDVSNSFKLNEELALNHAKLRELSINLENTVKNHQQEFIQLGKKFE
                     KKMQIALEKNEKDIKIVYEEILKSSLEQMISDIAHQWRQPLNELGIAMFQMKQNLKDE
                     KGFAEIYSQSKDMIKNMSETIDVFRTLFNKGVEQCVFIKETLNKALEIAFETIEKNHV
                     NINIVSKGDYEVLAYENGLIRVFLNLILNSIEAFKNKKRKIITINFSKFGKNYLKITI
                     KDNAGGIDKENLDKIFQPYFTTKHPSQGIGVGLYISRQIIESFQGKIKVKNGKDGACF
                     EIFLKLKERVE"
     gene            12525..13205
                     /locus_tag="RJ266_000395"
     CDS             12525..13205
                     /locus_tag="RJ266_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDV7354175.1"
                     /translation="MSQECKELIILVVEDEVKARESMINILSERFSKVIGAQNGDEGL
                     KKFKKFKPDLVITDIAMPIMDGLDMAREIKEISDDVPIVVLSAYSEKERLLRSIDIGI
                     DKYLIKPVDIEELFKVLDYLIGEKIEANMLVKISEEYQFNKTKRTLIYSGGEIVLTKK
                     ELAFISLLLKQPGALVLHEDIKKNVWIGEHVSDTAVRTFIKRVRDKVGEDFIKNVPSL
                     GYKININK"
     gene            13331..14797
                     /gene="ccoN"
                     /locus_tag="RJ266_000396"
     CDS             13331..14797
                     /gene="ccoN"
                     /locus_tag="RJ266_000396"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HDV7354176.1"
                     /translation="MHPGNVLNYDYTVARYFMFATILFGIVGMAIGTLIAFQMAYPNL
                     NYLAGEYATFSRLRPLHTSGVIFGFMLSGIWATWYYIGQRVLKVSMAESRFLMAVGKL
                     HFWLYMLTMVLAVISLFMGVTTSKEYAELEWPLDILVVLVWVLWGVSIFGLIGIRREK
                     TLYISLWYYIATFLGIAMLYLFNNMEVPTYFVTGMGKWWHSVSMYAGTNDALVQWWYG
                     HNAVAFVFTVGIIAQIYYFLPKESGQPIFSYKLSLFAFWGLMFVYLWAGGHHLIYSTV
                     PDWMQTMGSVFSVVLILPSWGSAINILLTMKGEWSQLRESPLIKFMILASTFYMFSTL
                     EGPILSIKSVNALAHFTDWIPGHVHDGTLGWVGFMTMAALYHMTPRVFKRELYSKSLM
                     EAQFWIQTTGIVLYFASMWIAGITQGMMWRATDEYGNLLYSFIDTVVAIVPYYWIRAI
                     GGLLYLIGFFMFTYNIYKTIACGRVLDKEPKSASPMAA"
     gene            14810..15475
                     /gene="ccoO"
                     /locus_tag="RJ266_000397"
     CDS             14810..15475
                     /gene="ccoO"
                     /locus_tag="RJ266_000397"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HDV7354177.1"
                     /translation="MFSWLEKNPFFFAVAVFVVIAYAGIVEVLPNFAENARPIEGKKP
                     YTVLQLAGRAVYIKDSCNACHSQLIRPFKSETDRYGMYSVSGEFAYDRPFLWGSKRTG
                     PDLARVGNYRTADWHENHMWDPTSVVPDSIMPSYKHMFKNNADIETAYAEALTVKKVF
                     NVPYDTENGTKLGSWEDAQAEVKAEAQAIVDQMKNQEVKDAFARGEIKEIVALIAYLN
                     SLK"
     gene            15480..15743
                     /locus_tag="RJ266_000398"
     CDS             15480..15743
                     /locus_tag="RJ266_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase, cbb3-type, CcoQ subunit"
                     /protein_id="HDV7354178.1"
                     /translation="MEHLSIVFDVIKNLITFDLATVQKHEWEIFQGYGFFALVMFLSI
                     VLYAYLYHLYRTEKKGERNYENYANLALKDDIDDSVLESKRSA"
     gene            15743..16606
                     /locus_tag="RJ266_000399"
     CDS             15743..16606
                     /locus_tag="RJ266_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDV7354179.1"
                     /translation="MQWLNLEDNVNLLSLIGAIFIILITLVIVGRMFKQMKEKKGESE
                     LSEHSWDGIGEYKNAVPTGWAVVFFLTIVWAIWYFLWGYPLNSFSSIGQYNEEVATHN
                     TKFEEKFKNLSPEDKIAMGQNIFLVQCSACHGITGDGINGKAQNLNIWGSEEGIINVI
                     KHGSKGMNFPGGEMLGAADLGVAEEDIPAIAAYVAKDLSAIKKTANENLVAKGKEAYA
                     TCAACHGEDGKGQDGMFPDLTKYGSAAFVVDVLHSGKAGFIGTMPSFPTLNDIQKEAV
                     GEYVISLSGGE"
     gene            16603..16824
                     /locus_tag="RJ266_000400"
     CDS             16603..16824
                     /locus_tag="RJ266_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4006 family protein"
                     /protein_id="HDV7354180.1"
                     /translation="MMENNNRCVFSLSGVTGMLIATVLLLAILAVLTIWGLKAQQEVM
                     QKPYSLKDVQSVKMFGSKEQDHRSIKEAQ"
     gene            16821..16922
                     /locus_tag="RJ266_000401"
     CDS             16821..16922
                     /locus_tag="RJ266_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354181.1"
                     /translation="MSKALEYLIVIGLVVAAAITAWSVLTVNHLHIG"
     gene            16919..17521
                     /locus_tag="RJ266_000402"
     CDS             16919..17521
                     /locus_tag="RJ266_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354182.1"
                     /translation="MKKILQDGFFLAIFFFVLLPSRVFALDAVLFNENILSQKVSNEI
                     NLIGKELYQKSNIFIGVMVGDKTEIETLLNKQKELPQSYILLLLSKNSHKVDIVGSKG
                     ALALIDKEAVLSPYPGTGSILPILATNKGDIYNAAILNGYADIVDRVAKSLGLQLEHS
                     IGNANRDTINILRILIYGFICFALLYYAQRRIKRKKNVRN"
     gene            17508..18029
                     /locus_tag="RJ266_000403"
     CDS             17508..18029
                     /locus_tag="RJ266_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7354183.1"
                     /translation="MLETKKSFWPYGILLSLLAIIIACIVTIFIASHHPVYEDDFYFD
                     SYQNVENNYNQIQKQQVNFDKFFKVNFQNDKITFIGKRKIPSYEVDQNSYVANFKISA
                     LQNINSNDLKVQVLLTRPFTKNFDQKLEGQVKNGILSIALPKLDKGRWELKLKFYANQ
                     ETVGFFSYELNAQ"
     gene            18026..20392
                     /locus_tag="RJ266_000404"
     CDS             18026..20392
                     /locus_tag="RJ266_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HDV7354184.1"
                     /translation="MKLRIFSSSRQIREYYNQKKQQNALLDSAIHIGEFLDKVCLSNF
                     HKASSYESLLLMQEACLKSKDLEKKLGISVEFFAFLKNNEYLFSFFKELSLEKKSIED
                     LKNNDYYATYNEHLEILDEVYKNYLALLEKNSFYDDLSLPKNYTFNKDFLDEYEAIVY
                     DLQGFLSKFEENLLSEISQIKEVVLSFKTSKFNLEYLLKLDFLKIFDLKINTHYEINL
                     SKQEILKEEIFKTKNSKMKLKSFELRALQCAFVMDEISHFVRKGLKPENIAVITPDES
                     FCEFLRLFDKDNMLNFASGISIKESLFYQKFQALYESASSASFVYKNQEDYFEDTQMM
                     FDYHNTLLHSLKLDFIEFKKYFDEKCDFEYFEKLLALFLENEKQELIYLIRKELYFIK
                     DLLKNQSLTLKELIHLFFMQISQLSLSDVGGGKVTVMGLLESRGLCFDGVILVDFNEE
                     FIPKRSVNELFLNNEVRKKAGLISYDRRENLQRFYYESLMKNALEVSICFVENEEKSK
                     SRFLDELDFDFFYETHIHQKAYLNALKLDYEGIKPNLTPIKAPILKHNPFEFPLSFSR
                     FNLLENQKRTYYYRYILNLAEPRVLSEESKAKNQGNFIHKMLEIYYKNYANNDFDINV
                     FANLLDKEYQKYNISELDLEVFKLKFIQFAKNEKEHFSKGFYVAYTELELNNILKLGT
                     DSIKLKGTIDRIDSSKEGNLIIDYKSGKVPSNSYQLAFYQALYDENASVGFYDLNSMQ
                     ILHQKAKSLDELRERLKDLVLMSKEEIEFENEQDEYCPYKLIYKKELK"
     gene            20389..23154
                     /locus_tag="RJ266_000405"
     CDS             20389..23154
                     /locus_tag="RJ266_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RecB-like helicase"
                     /protein_id="HDV7354185.1"
                     /translation="MSQFEPFLALEASAGSGKTFALSVRFVALILKGARINEILALTF
                     TKKAANEMQKRIIETFLNLEKENKTSECNELCKLLGKDKEELISLRDAKKEEFLRTEL
                     KISTFDAFFGKILRVFALNLGLSSDFTMSEERLDVREIFLKLLKKDELKDLAYYINLV
                     DEKENFFNELEKFYENAYFQNRPKILNPTKAYINKAYSELRSYCLGLTHVKNYKNLCD
                     NFKSEVLDLSVFMQSSFMTKFESTKYLQDLESINLHFSAKRMELINALNTYAIELENY
                     KIANLMNLLNHYSEAKNIFHKDKNTLNFQDVSKKVYELITSEFKDMIYFRLDGFISHL
                     LIDEFQDTSVIQYQILRPLIAELVSGEGVKKNRTFFYVGDKKQSIYRFRKGKKELFDL
                     LKQEFSQIKSDNLNTNYRSKELLVDFVNETFKEKIKDYKEQFALESKKGGFVRIVESK
                     EQKVKNQAQEIKEKTLETLFEQINFLRSKNISYDDICILCWKNSDADMVLDFLREQNI
                     PAFTQSNVLLENKASVRLVLEYAKYCIFGDEFYLAFLKELLGFEPRKITLDFSKNAME
                     NVLFLIKELKLDLNDIALIQFIEYAKTKENFLKLLFEPCALKIVSEQNMGISIMSVHK
                     SKGLEFDHVILLDSLSKNNSNNEDIMLEYDINQGWQLHIKDKIRELTKEPIYTLFKEN
                     ITRANYEDDINKLYVAFTRAKESLIIIKRNEESVNGNYPSYFKGGFLNIHSQERGFLE
                     SKEQILSVKKESIQTLQKFEKITLQEIQSEERLDSKELYFGNAFHFFMQNLKLPKGEN
                     FQILTQRCKSKFRHFLDESDFEKLFKRIEILLKNIQFQNLIGDGKLLKEQALSFNGEI
                     KQLDLLALKDEEAFIIDYKTGLAMQDKHKEQVRTYKIAISEILKKDKVRAFIVYCLEN
                     EIQILEI"
     gene            23238..23663
                     /gene="rplM"
                     /locus_tag="RJ266_000406"
     CDS             23238..23663
                     /gene="rplM"
                     /locus_tag="RJ266_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HDV7354186.1"
                     /translation="MTKITKPNEVKREWIVLDAEGKRFGRLLTEVATILRGKNKPCFT
                     PNVDCGDYVIIINASKAVFTGANKAEDKLYHRHSGYFGSVKSEKFGDLLEKNPAKLYK
                     LAVRGMLPKTNLGRAMLKKLKIYAGSEHPHTAQIAKEGK"
     gene            23666..24055
                     /gene="rpsI"
                     /locus_tag="RJ266_000407"
     CDS             23666..24055
                     /gene="rpsI"
                     /locus_tag="RJ266_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HDV7354187.1"
                     /translation="MATTYATGKRKTAIAKVWVKPGSGKISVNGVDLNTWLGGHEAIK
                     LKVVQPLLVTKQETSMDIKATTLGGGYSAQAEALRHGISRALAAMDADFRALLKPKGL
                     LTRDSRTVERKKYGRRKARRSPQFSKR"
     gene            24180..25139
                     /gene="cadF"
                     /locus_tag="RJ266_000408"
     CDS             24180..25139
                     /gene="cadF"
                     /locus_tag="RJ266_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin-binding outer membrane protein CadF"
                     /protein_id="HDV7354188.1"
                     /translation="MKKIFLCLGLASVLFGADNNVKFEITPTLNYNYFEGNLDMDNRY
                     APGVRLGYHFDDFWLDQLEFGLEHYSDVKYTNTNKTTDITRTYLSAIKGIDVGEKFYF
                     YGLAGGGYEDFSNAAYDNKSGGFGHYGAGVKFRLSDSLALRLETRDQINFNHANHNWV
                     STLGISFGFGGKKEKAVEEVADTRPAPQAKCPVEPREGALLDENGCEKTISLEGHFGF
                     DKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANEL
                     EKYGVEKSRIKTVGYGQDNPRSSNDTKEGRADNRRVDAKFILR"
     gene            25139..25777
                     /locus_tag="RJ266_000409"
     CDS             25139..25777
                     /locus_tag="RJ266_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDV7354189.1"
                     /translation="MNKTILFDLDGTLIDSTDAILNSFQGAFKALGLTSKNNEEIKNL
                     IGYPLEQMFRMLYPDKVNLSKEFVLAYREIYAQIYLEQTTLLPKAKEALELGSEIADL
                     GIVTTKGGKFTPILLDYLGVKKFFKTLITLEDVTNPKPSSEPIILALKRLNKTQENAY
                     MIGDTILDIQAAISANITPLALTCGYGNENELKSHSMVFLNAYEAVTYIARL"
     gene            25875..29435
                     /gene="nifJ"
                     /locus_tag="RJ266_000410"
     CDS             25875..29435
                     /gene="nifJ"
                     /locus_tag="RJ266_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HDV7354190.1"
                     /translation="MGKIMKTMDGNEAAAYAAYAFTEVAGIYPITPSSPMADYTDMWA
                     AAGKKNLFGVPVKIVEMQSEAGAAGSVHGSLQAGALTTTYTASQGLLLKIPNMYKIAG
                     QLLPCVIHVAARSLAAQALSIFGDHQDIYAARQIGFAMLCSHSVQETMDLAGVAHLAA
                     IKGRVPFLHFFDGFRTSHEIQKVEVMDYAHFDRLLDREALLEFRNNALNPENPKTRGT
                     AQNDDIYFQTREVSNRFYDALPDVVNEYMQEISKITGREYKPFTYYGHKEPERMIVAM
                     GSVTQALEEVVDYLNAKGEKVGILKVYLYRPFSLKYFFDVMPKSVKKIAVLDRTKEPG
                     SLGEPLYIDVKSAFYGRENAPVIVGGRYGLSSKDVDPAQMIAVFENLKLDNPKDGFTV
                     GIVDDVTHTSLSTGEKISLGDESTIECLFYGLGADGTVGANKNSIKIIGDKTDFYAQA
                     YFAYDSKKSGGYTRSHLRFSKKPIRSTYLVSTPHFIACSVAAYLEIYDVLAGIRKGGT
                     FLLNSIWNAEETIRQLPDAVKKTLAEKEVNFYIINATKLARDIGLGNRTNTIMQSAFF
                     KLAKIIPYEDAQKYMKELAYKSYSKKGDAIVEMNYKAIDVGADGLVKVEVDPNWKNLE
                     LKEKEQTNAYKGTEFVEKIVKPMNAAKGDDLPVSAFLGYEDGSFEHGTTEYEKRGVGV
                     MVPRWIEANCIQCNQCASVCPHAVIRPFLINDEEMANAPRGVKDHALEAKGTKGEKLS
                     FKIQVSPLDCTGCELCVHECPTKEKSLVMVPLQEEMDFGEQENADYLFKEITYKDDIL
                     NKETTKGAQFAQPLFEFHGACPGCGETPYITLITRLFGERMIVANATGCSSIYGGSAP
                     STPYRKSVKNGHGPAWGNSLFEDNAEFGLGMKIATENTRHRIEHIMNESMQEVPNALS
                     ALFKDWIANKDNGAMSVEIKDKMIPILEQNKNIKAVQDILELKQYLSKKSHWIFGGDG
                     WAYDIGYGGLDHVLASGENVNILVLDTEVYSNTGGQSSKSSRTGAVAQFAAAGKPIQK
                     KDLGQIAMTYGYIFVAQVNSTANYTHLIKAITAAEAYDGPSLVICYSPCIAHGIKGGL
                     GYSGEQGELATKCGYWPLYTFDPRLEEQGKNPLTLTGKEPDWDLYEQFLMNEVRYNSL
                     KKANPEHAVELFERNKKDAQRRYRQLKRIAMADYSNEVES"
     gene            29459..29770
                     /locus_tag="RJ266_000411"
     CDS             29459..29770
                     /locus_tag="RJ266_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transformation system protein"
                     /protein_id="HDV7354191.1"
                     /translation="MCFSTLFAQDNFEEYFKLIDKENRINFNTLQNPFVNPTFEKLRH
                     IKITAIMLDKVKIYDRWYKKGDMIDDAIIYEINTKEIKFQYDNLEIAIQINKNDKINI
                     N"
     gene            29748..31160
                     /gene="mshL"
                     /locus_tag="RJ266_000412"
     CDS             29748..31160
                     /gene="mshL"
                     /locus_tag="RJ266_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus (MSHA type) biogenesis protein MshL"
                     /protein_id="HDV7354192.1"
                     /translation="MIRLILINILFCHYLYALDCQKRLFDISINEKLSIQESLDELAK
                     YCSFSIIVKDKIAKEKLEILQNSVNIHQMSLDEIFNFFIKEHDLSYDFDGKILRISGI
                     NTKIFKISYITSIREGQSITKASVDAKPRQSEYSGSFDDAEDNMIKSMEKFDFWQNIE
                     KEIIVLLKNSHEDYEAKTPIINPNAGLIIVTGTNSQLKSVKNYLQKLENRLKKQVIID
                     VSILAVSLNENHSSGINWQNFNIGLNSQVNNENSFIQFQNGQGFVKNLGLRANLNFDS
                     IINFLSQNGKTSVLSNPKLMALNNQQAIISVGDTINYQVKESSKGTENGTTVSESYNN
                     YSIFVGILLNILPEISDDGKIMLRINPSLSDFKYPEDNKRQKEPRTIAPDTIQKKLSS
                     VVQVENNQTLILGGLISHDKSNEKNSINFLSKIPILGSLFKGEVLNSKATEIVFIITP
                     SIVDSVNAPSLKDLGFKHYE"
     gene            31153..31761
                     /locus_tag="RJ266_000413"
     CDS             31153..31761
                     /locus_tag="RJ266_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7354193.1"
                     /translation="MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLA
                     KKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILDEVGMYDYAMLESIRIYSDSISF
                     VLSSHKKLNILKKEHFKSRLSACFKLKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
                     QGNLRYIDKTLKSFYEINSFFDKNKSQEYILKLSALENGLLR"
BASE COUNT        11443 a         3810 c         5833 g        10709 t
ORIGIN      
        1 ttaggagata cgaaatgata caaaaagctt tagccttagc tgaagaatta caaggacaaa
       61 tagaagccaa tatttcaaat tctgaaaaag aatttcatgc taaaatgcaa aaacttctta
      121 ataatcccaa aaataaagtt atgcttatag agcttttaga tcgttctttt agatgtaaag
      181 ataaaaatgc aagttttgag cttatagaat atactttgag taaatatggc atagcggatt
      241 tttttagcac ttttgaaaaa ttcctacttt ttagcttttt aaattttggc aaatttgctc
      301 ctaatttaag tgtacctttt tttgtcaaac atttaagaga agatactaaa gctatggttc
      361 tagatgcaaa tcctagtgtt ttagaaccac atattaagaa aagaaaagag caagataaaa
      421 ttaccttaaa tgtgaattta atcggcgaag aggttttagg tgaagctgag agtaaatatc
      481 gtatgcaaaa atacgaagaa gccttaaaat caagctatat cacttatatt tccataaaaa
      541 ttactactat tttttcacaa attaatatta tagattttaa ttattctaaa gaagaggtcg
      601 taaaaagact agattatctt tatgctttag ccttagaaga agagaaaaaa caaggtgtat
      661 ctaaatttat caatcttgat atggaagaat ttagggattt agagctcacc gttgcagctt
      721 ttatggaaag tgtggctaaa tttgatatta aagcagggat tgttttgcaa gcttatattc
      781 ctgattctta taagtatctt aaaaaacttt ttgctttttc aaaagagagg gttttaaaag
      841 gtatgaagcc tattaagatc cgttttgtta agggtgctaa tatggaaagt gaagaaacca
      901 ttgcgtctca aaggggttgg gagcttccta ctttttacaa aaaaatagat actgatagta
      961 attataataa aatgcttgat tttattcttg aaggagataa ttataaatac atcaacatag
     1021 gaattgcaag tcataatatc tttgagattg cttatgctta tacacgcata agtgaagtgg
     1081 gtgctttgga ttcttttact tttgaaatgc ttgaaggtat gagtttgcaa tgttcttatg
     1141 aattatctaa aatgcatgat ctaatccttt atgccccagt ttgcgatgaa gcacatttta
     1201 acaatgccat tgcttatctt gtaagacgcc ttgatgaaaa tacaagtgaa gataatttta
     1261 tgcgttattt tttcaatctt aaagtaggag ataagaactg gaatatccaa aaagaacttt
     1321 ttttaaaatc tttagaaggc ataaaaactc ttgataatac tacacatcgt aagcaagata
     1381 gaaataaaga atcaaatatc ataagttctt atgaaagtaa aaaatttagc aatgaaagcg
     1441 atacggattt tattttagca caaaatagag cgtgggctaa agaaattaaa actaaatatg
     1501 aaaatttaaa agattatgat gtttatcctg ttataggcga acttgatttt aaagcagaaa
     1561 atttaaatgt tttagaagtt aaagataaga ttgaagatag agtgatagga aaggcttatt
     1621 tagcaggaga aaaagaaatc aaacaagctt tagaagtagc taaaaattcc aaatttacac
     1681 aaaaaagtca tgatgaaatt tatcaaattt tagccaaaag cgcaaaactt atgagagaaa
     1741 gaaggggaga tttaataggt ttggcagctt tagaagtggg taaaaccttt ttagagatcg
     1801 atcctgaagt aagtgaagct attgatttta tagagtttta tccgcactct ttagaagagc
     1861 ttaaaaaaca aaatccaaaa gttacattca cacctaaagg tataggggtt accatagctc
     1921 cttggaattt tcctatagga atttcagtag gtactatagc tgcaccacta gccgcaggta
     1981 atgtggtgat ttacaaacct tcttcacttt caactctaac aggttatatg ctttgtaagt
     2041 gtttttggga ttcgggtatt ccaaaagatg ctttgatttt cttaccttca aaaggaagtg
     2101 atatttctaa atatttactt attgatgaag cgattaaatt ttcaattctt acaggaggag
     2161 aggatactgc ttatgccatg ttaaaagcta atccaacctt gcttttaagt gctgaaactg
     2221 gcggaaagaa tgcgactata gtttctaaat ttgctgatcg tgatagtgcg attaaaaata
     2281 tcattcattc tgcttttagc aatagcggtc aaaaatgttc agctacttct ttgctagtct
     2341 tagaagaaga ggtttatcat gatgaagaat ttaaaaagac tttagtggat gctgcgagtt
     2401 ctatggcagt gggcaatcct tttgaattta aaaataaatt aggtacttta gctgataagc
     2461 caagttctaa agttcaaaag gccttagatg aattacaacc ttatgaagaa tgggcattaa
     2521 aacctaagtt tttagaggat aatccttatt tgatgactcc aggcataaaa tatggcacta
     2581 aaaagggtga ttttactcat atgaatgaac tttttgtacc gattttaagt gtgatgaagg
     2641 ctaaagactt aaaagaagct attgatatag taaattccac aggttatggt ttaactgcag
     2701 gttttgaaag cttagatgaa agagaatggg agtattttca cactcacata gaagcaggaa
     2761 atatttatat caataaacca accacagggg ctatagtgct gcgtcaacct tttggtggga
     2821 ttaaaaaatc agctataggt ttgggtagaa aagtgggaat ttataattat atcactcaat
     2881 ttttagagat taagcaagaa gattttgatg atcatttaat tgaagataaa ttttcaaaaa
     2941 aattagcaca aatagattta aaagaagcac aagattttat gaacaattta attaaaatgt
     3001 ctcaatctta tgcttatcat tataaaaacg agtttagtgt ttcaaaagat tatgtcaata
     3061 ttcgtggaga agataatctt ttttcttata ctaaaataaa gaatatggtt ttaagacttt
     3121 gtggaaatga aagcttaaaa gatgttttag gtgtggtttt aggtgcaaat attgcaaata
     3181 ttgatctaag tatcagttat gatgaacaag atgttagtat gatagaacga attgttcaaa
     3241 gcataggagc aaaagtattg tttttaaaag aaaataaaga aaattttatc aagagtatta
     3301 aagaatatga aagagtgcgt tatttagcaa agccagatgt aaatgatgag atttataaag
     3361 aggctgcaaa gcttgctaaa atcattataa gagaaaagcc attattaaat ggtcgttttg
     3421 aacttttaaa ttattttaat gaaaaagctt taagtatatc ttttcatcgt tatggaaatt
     3481 taggcattag agcaatatct taatgatcaa ggagagattg atggaagtgg ttcaaattaa
     3541 taccccaata gcagtgatgt ttgtagtgta tgccttatta atgctttata taggttttta
     3601 tttttataag caaaataaaa attcagagga ttattttcta ggtgggcgta ctatggggcc
     3661 tgtgatatct gcacttagcg caggggcttc tgatatgagt ggttggcttt taatgggttt
     3721 accaggagct ttatatgtaa gtggttttat agattcttat attgcaattg ggcttactat
     3781 aggagctagt ttaaattgga tttttgtggc aaaaagactt agaatttata ccagtgtgat
     3841 tgcaaattct ttgactattc ctgattattt tgaaactcgt tttgatgatg ataaacatat
     3901 actgcgcatt gtatgtgcgg tggtaatttt gatatttttt accttttatg tttcatcagg
     3961 gcttgtaagc ggagcaaaac tttttgaaag tacttttggt atcagatacg attatgcttt
     4021 aactactgga acgattatta ttgttgctta tactttttta ggtggatata aggcggtttg
     4081 ttggacggat atgatacaag ggcttttaat gatgatggct ttaattattg tacctttggt
     4141 tatgctttat catttaggtg gttttggtga agcgatgaat atagtaagag aaataaagcc
     4201 acaagcttta tctatgggcg aaggagtagg aattgtaagc attatatctg cacttgcttg
     4261 gggtttgggt tattttggtc aaccacatat tttagtgcgt tttatgtcga ttcgttctac
     4321 taaagatatt cctatggcca cttttatagg tattgcttgg atggcggttt gtcttttaag
     4381 tgcttgtatg ataggtattt taggtatagc ttatgtgcat aaatttgaat taagtttgca
     4441 agatcctgaa aagattttca tcgtgatgtc gcagctttta tttaatcctt ggatagcagg
     4501 tattttactt agcgctattt tagcggctat tatgagtacg gcaagttcac aattgctggt
     4561 ttcaagttct actatagcgg aagattttta taaaaagatt tttagagaag atgcaccaag
     4621 tcatattgta ttaaatttag gtaaattagg tgttttattg gtagctgtaa tagcgttttt
     4681 gatttctact gataaaaact caagtgtttt gagtatagtt tcttatgcat gggctggatt
     4741 tggagcttct tttggttctg taatgctttt ttctttattt tggagtagga tgacaagagt
     4801 aggagcgatc ttaggtatga taacaggagc tgctactgtg gtgctttgga agaattttgc
     4861 aaattcaggt ctttatgaaa tagttccagg gtttttagta gcttcggcgg tgattattat
     4921 tgcaagtttg tttacaaatg taagatctgg aactaaagca gcttatgaaa agatgttaaa
     4981 agagctttga gaacaaaagc cttttttaag gcttttgtat taaaaatctt agcgtgggtc
     5041 cactttgatc gatttcaagc actttaaaac cacggttttt tacatcttga ggtatggaat
     5101 tgatactttg tgggcaatcg caaagcactt ccaaaatttc tccactttta agcttaggta
     5161 agacatcaag tgttgctata gcaggataag gacaagcttc accttgtaaa tttaaactat
     5221 aagtaatttt cactgtttat cctttaagtt gatttttaaa aaagtgtttt ttgtaaaata
     5281 ctacaaaaac aaacattaag atgaataaaa taaggttgat aaaaaatcca tttaaattgc
     5341 caaattcagt taaaagattg atttttatac cttctttaaa agcttttggt aaaaagtcat
     5401 aacttaaagc taaaatcata gttcctatta tatttgcaat tcctactatt ataaaatgac
     5461 tttgtccttc aaaggcacga taagtccaac cacactcgca acctccggca aaaactatac
     5521 caaaaccaaa caaaaatgct cccacagcta cagcaggaga aagttctatg agtttgctag
     5581 tatgaccttg caagataaaa gcaaaagcga ttaaagaggc gataatcata ccgattaatg
     5641 cgccttttat agcattatct ctaccaaata aaaataaatc tctaaagcaa gaagtaaaac
     5701 aaatttgccc tctagaaata acaaaaccaa aaacaaaacc aaaaatcagt gctaaagcta
     5761 gaagactttg tttgttttgt gtgctgatat tgccatttgt aaaaacaaga taaaacaccc
     5821 aaactaaaaa ggctatgaaa agcaatatgc ctaagttaaa atataatttt gtacgcaaac
     5881 tttgcttgtt taacggcaag ttttctttat ttacacgttc taatttagct ttaggtttaa
     5941 aaaaggaagt gttgcaaatt ttcactccta gataaattcc taaaaccata aaaacagtaa
     6001 aaagccaagt gtgtaaagaa aaataaggta aacctgtaaa aaaattagct aaattgcatc
     6061 caaatgcaag tcttgctcca tatcctgaaa gaattccacc tactattgct tgaaaaattc
     6121 ttatattgct agcaggtaga cgaaatttga ctttgttagc taaaagtgcg gctactaaac
     6181 aacctataaa catacctatg agcataatac catcagttct tgttaaaggg gttccattta
     6241 aattttgctt ttggtaataa gaatatccat ctaaattcat acctaaaagc tctaaaaact
     6301 cgccacccca acgtgtcatt tctccagtaa cagcccaaac gccaccaaaa atcccaaaat
     6361 acactgcact taaaattcca agtgcaatca tagaacgggg attgtcccaa aaattgatta
     6421 aatatttttg tttaaaagaa ttcaaagaaa gatcctaaaa atgtaatcat caaaacttga
     6481 tgctaaaaaa gagtgagatt atagcttaaa tttaatatga agtcaaaaag aatattgata
     6541 aatttatttt gtttttcatt aaaaatcgct ataattatca ctttggaaga ttagcgtatc
     6601 tggtgatcgc cactgacttc aaatcagatg aaaggatagt tgactattct ttggggagtt
     6661 cgattctctc atcttctcgc caatattaag taaaatcaag gaaattttta tgagcaaagc
     6721 agatattatt gtcggcattc aatggggcga tgaaggaaaa ggtaaggtag ttgataaatt
     6781 atgtgaaaat tatgattttg tttgcagaag tgcaggtgga cacaatgcag gacatacgat
     6841 ttgggtaaat ggtgtaagat atgcgcttca tcttatgcca agtggagttt tgcatccaag
     6901 atgtattaat attatcggaa atggagttgt ggtttctcct gaagtattga ttgctgaaat
     6961 ggctcaattt gaaaatttaa aaggtagatt atatatcagc gatagagctc atttaaattt
     7021 aaaacatcat tctttaatag acattgcaaa agaaaagctc aaaggcaaaa atgccatagg
     7081 aacaacaggt aagggtatag gaccttctta tgcagataag attaatcgta caggacatag
     7141 agttggagag cttttagaac cacaaagact ttgcgaggct ttaataaaag attttgaagc
     7201 taataaaact ttttttgaaa tgcttgaaat tgaaattcca agtgctgaag aattgcttgc
     7261 tgatttaaaa cgttttaatg aaattttaac tccttatatt acagatacta caagaatgct
     7321 ttggaaggct ttagatgaag ataaaagagt acttttagaa ggagctcagg gttctatgct
     7381 tgatattgat catggaactt atccttatgt tacaagttca agtactattt cagcaggcgc
     7441 tttaacagga cttgggttaa atcctaaaga agcgggaaat attataggta ttgtaaaagc
     7501 ttatgcaacg cgtgtgggaa atggagcttt tcctactgag gataagggcg aagatggaga
     7561 aaaaattgcg caaattggaa aagagattgg cgtaagcacg ggacgcaaaa gacgctgtgg
     7621 atggtttgat gcggttgctg taagatatac agcaaggctt aatggtcttg atgctttatc
     7681 tttgatgaag cttgatgttt tagatggttt tgaaaagata aaaatttgtc gtgcttatga
     7741 atataagggt atggaaatcg actatatacc aagtgattta gaaaatgttc aacctattta
     7801 tgaagaaatg gatggttggg ataaagtttt tggtataaaa gattatgatt tattgccaga
     7861 aaatgctaaa aaatatatag caagacttga agagcttgca ggggttaagg taaagtatat
     7921 ttctactagc cctgaaagag atgatactat catcttatga aaagtaaata taattctgtt
     7981 gtaaaggtaa gaaaacaaca acttgataaa gcagaatcaa atcttaatca agccaaacaa
     8041 agacagcttg aacatgaaaa agcttatgaa ctttcacgcc aagagtgtga aagtttaggc
     8101 gtattgccaa aatcaggatc tatagcagag ttaagatcga atttaagtat ggcacaagta
     8161 ggacgcgagg ctttggcaag agctaaggag aaagtagaac tttctaaaaa agaaatgaat
     8221 cattatcagt ttttatatca aaaagcacat ttagattatg aaaaaatgaa ggttttagaa
     8281 gccgaggaaa ttaaacaaaa gcaaaaagaa cttgccaagg ctgaagaaaa atttttagat
     8341 gaaattgcaa tcagtcgttt tttcaaagga gaaaaagatg attaaaaaat ttatattgtt
     8401 agtttttatt tcaagtgtag tttttggagc tgaacaagat tgtgagcagt attttgaagc
     8461 tagaaaagct caaattgaat tgcaaactag agaatttgat gaagcaagac aatctttaga
     8521 agcttataaa gcctcttttg aagctttgca aaaagaaagg cttgaaaatt tagaaaaaaa
     8581 agaggctgag gttaatgcaa ctttggcaaa aattgaagaa ttaaagcttg aaaatgcaag
     8641 gcttgtagaa aaacaacaaa agattttaaa ttcaatcaat gataaaactc aaggtagggt
     8701 taaagaaatt tattcccaaa tgaaagatgc agccattgca gatgttttaa gtcaaatgga
     8761 tgcagaggat gcaagcaaaa taatgctttc tttggaatcg cgtaaaattt caggtgtttt
     8821 atctaaaatg gatccaaaaa aagctagcga gcttactttg cttttgaaaa atttagataa
     8881 taatgctagt aattaggtga ttaaaataat gaaaattttt catttttaac attcttttac
     8941 caaaaataag ctattatttc aaacattatc aaataaaagg tttttaagat gcgtataaaa
     9001 ttaccacata ttccttatat cgcaaataaa atgatgttag atatagctaa ttcttctttt
     9061 gtagaaatta aagatcaatt agaaaagctt aaggtatgta taatagaagt tttagagaaa
     9121 gatattctaa atgaaagaaa attagatgaa agagtaaaag agcttttaga gcaacaagaa
     9181 gatgaaatgg agcttatgca agtagatcgt aaaaatatgt tttggcttgt gaagaaaaag
     9241 ttagctcctg aatttaatgt gattttagat tctgaagata gacataatca tctagcgcat
     9301 caaattttag aagaacttgt agagaatgat tatattaatt ttatagtgag tgaaaataga
     9361 gttaaaaatt taatcttttc aagcatagag tcttatctta aaatttatga aaaacttgaa
     9421 gatgaggttt atgagaaaat tagcaattat aaaacaaaac ctattccagg tagcgaagaa
     9481 tacgatctta tctttgaaaa actctatcaa gaagagctta gaaaaaaagg tatgttttaa
     9541 tgaaggctta tatttattta gaaaatgata tttttttaag tgctaaggct tttggaaaga
     9601 gcggtacttt ttttggagag cttgtattta acacttcttt aacaggatat caagaaatta
     9661 tttcagatcc ttcttatgca gggcaattta tcgtattttc tatgccagaa attggtatag
     9721 tgggaaccaa tgaaaatgat aatgaaagca aggaaatttt tgcaagtggt gttttaatgc
     9781 gtgaattaag ttccagtttt tcaaattttc gcgctaaaga aagtctgcaa gattatcttg
     9841 aaaaacatgg aaaaatagga atttatgaac ttgatacgag atatctagta aaaatgataa
     9901 gaaataatgg caatttaaga gctgtaattt caactgaaat ttcaaataaa gaagatttaa
     9961 aaatcgcctt agaaaaatca gcaaaaattg atgaagtaaa ttttgtaaaa gaagttagca
    10021 ctaagaaaaa ttattctcat aaacaaggcg tttggaacgc tagttttcaa aaatttaatg
    10081 atgctaaaag aagtgagaaa aaagttgctg ttatagatta tggtgttaaa acaaatatct
    10141 taaatgaact tgtagaagta ggttttgaag tagaagttta tccatataat gttaaagcag
    10201 atgagttgat tactctgtat aaaaaaggtg aaattcaagg cgtgtttctt tctaatggtc
    10261 caggtgagcc aaggatttta aaacaagaga ttgcagagat taaaaaactt gcagaagcta
    10321 aaattcctat gcttggaatt tgcttaggtc accagctttt aagtaatgct tttggatatg
    10381 aaacttataa aatgaaattt ggacaacatg gagcaaatca tcctgtgatc aatcttgata
    10441 caaaaacggt agaaattacc gcacaaaatc ataattataa tgttccagaa gaattagctc
    10501 aagtggctca tatcactcat agaaatttat ttggcgataa tgttgaagga gtaagatata
    10561 aagactatcc tattatttca gtgcaacatc atccagaaag ttcttcaggt cctcatgaaa
    10621 gtaagtatat ttttaaagaa tttatgaatt tgatgtgagt atagattttt tagctattat
    10681 cagcgttgct tttttatcta gttttggaca ctgctattct atgtgtggtg gttttaattt
    10741 actttttata aatttgaatt caaaaagcaa taatttattt ttattaactt ttatttataa
    10801 tttgtttaga atttttgctt atattgtttt agggataatt tttgggactt ttgggaatat
    10861 cttggcaatc aatgctaagg ttcaaagttt gtcatttttt attcttggta tatttatgat
    10921 gattttgggt tttgctctta tttttagagg caatatgtta tcttttattg aaaataatgt
    10981 tttttttgat agttttgtaa agaaaattat taaaaaatct aaaaatttta aaggattaaa
    11041 atcagccata tttttaggat tttcaaatgg ttttgttcct tgtggattgg tgtatttttt
    11101 tatagccaat gcaatgagta agcaaaatat ttttgaaggt attttggtaa tgatgatttt
    11161 tggaatatca actttacctg cgatgttatt tttttctaaa atttcacagt tttttagtga
    11221 ttttttgaaa aatttattta attatttatc gtatggcgtt attgtttgtt acggtataaa
    11281 tcttgcctat ataggtttta aggcttttca atgaaagatt tttttaaaga tcagtttttt
    11341 aaagctcttg aaaaaaatac aattttttca agagctgatg ttcaaggaaa tttaattttt
    11401 gtcagtgata agctttgtca aataagtgga tatagtaaaa aagagcttat aggaaaaaaa
    11461 cattcaatat ttaaacatcc agatgttgag gaatgttata ttgaagaact tttaaaaaaa
    11521 ctttcatata aaaaacctta tcaagttatt tttaaaaata ttgataaatt aggcaaaact
    11581 ttctatcttg aaactttatt aatccccata ttggataaaa ataatgaatt aatagaaata
    11641 gtagcattct ctcatgatgt tagtaattct tttaagctta atgaagagct tgctctaaat
    11701 cacgctaaat taagagaatt aagtattaat cttgaaaata cagttaaaaa tcaccaacaa
    11761 gaatttatac agttaggtaa aaaatttgag aaaaaaatgc aaattgcctt ggaaaaaaat
    11821 gaaaaagata ttaaaatagt atatgaagag attttgaaat cttcattaga acaaatgatt
    11881 agtgatatag cacatcaatg gagacaaccg ttaaatgagc tcggtattgc catgtttcaa
    11941 atgaagcaaa atcttaaaga tgaaaaagga tttgctgaaa tttactcaca atcaaaagat
    12001 atgattaaaa atatgtcaga aacaattgat gtgtttagaa ctttgtttaa caaaggagta
    12061 gagcagtgtg tatttataaa agagacttta aataaagcct tggaaattgc ttttgaaact
    12121 atagaaaaaa atcatgtaaa tattaatatt gtttcgaaag gtgattatga agttttggca
    12181 tatgagaatg gtttaataag agtttttctt aatttgattt taaattcaat agaagcattt
    12241 aaaaacaaaa aaaggaaaat cataacaata aatttttcaa aatttggaaa aaattatctg
    12301 aaaattacaa taaaagataa tgctggtggg attgataaag aaaatttaga taaaattttt
    12361 caaccttatt ttacaacaaa acatcctagt caaggtatag gagtaggact ttatataagt
    12421 agacaaatta tcgaaagttt ccaaggaaaa ataaaagtta aaaatggaaa agacggggct
    12481 tgttttgaga tatttttaaa actaaaagag agggtagagt agaaatgtca caagaatgta
    12541 aagaattgat aatattagta gttgaagatg aggttaaggc tagagaatca atgattaata
    12601 tattaagcga acgttttagt aaagtaatcg gagctcaaaa tggagatgag gggcttaaaa
    12661 aatttaaaaa atttaagcca gatttagtta tcacagatat tgctatgcct attatggatg
    12721 gactggatat ggcaagagag attaaagaaa tttcagatga tgtcccaatt gttgttctta
    12781 gtgcgtattc agagaaagag agacttttgc gttctattga tattggtata gataaatatt
    12841 tgattaaacc tgttgatata gaagagttgt ttaaagtttt agattatctg ataggtgaaa
    12901 aaattgaagc aaatatgctt gtaaaaattt ctgaagaata tcaatttaac aaaactaaac
    12961 gaactttaat ttacagtggt ggagaaattg ttttaactaa aaaagaattg gcttttattt
    13021 ctttgctttt aaagcaacct ggagctttgg ttttgcatga agatattaag aaaaatgttt
    13081 ggataggtga acatgtgagc gatactgctg ttagaacttt tataaaaaga gtaagagata
    13141 aagtgggtga agattttata aaaaatgtgc caagtttagg ttataagata aatatcaata
    13201 aataagactg atttagcctt aaaatataaa acataacaaa tgattaacaa aattatcatt
    13261 tttaagaaaa aatgtataat taatattcta taatattctc ttgttatcaa aaattttaag
    13321 gagaaagtcg atgcatccag gtaatgtatt aaattacgac tatacggttg caagatattt
    13381 tatgtttgcg accatattgt ttggcattgt tggtatggct ataggaactc ttatagcttt
    13441 tcaaatggca tatcctaatt taaattattt agcaggagaa tatgccactt tttcaagact
    13501 tagaccactt catacttcag gtgtgatttt tggttttatg ctttcaggga tttgggcaac
    13561 ttggtattat ataggtcagc gtgttcttaa agtgagtatg gctgagtcaa gatttttaat
    13621 ggctgttggt aagcttcatt tttggcttta tatgcttact atggttttag ctgttatatc
    13681 tttgtttatg ggtgtgacta catctaaaga atatgcagag cttgagtggc ctttagatat
    13741 tcttgttgtt cttgtttggg ttttatgggg tgtaagtatt tttggactta ttggaattcg
    13801 ccgtgaaaaa accctttata tttctctatg gtattatata gctacatttt taggtatagc
    13861 tatgctttat ctttttaaca acatggaagt accaacttat tttgttactg gaatgggtaa
    13921 atggtggcat agtgtatcaa tgtatgcagg aacaaatgat gctttagtac aatggtggta
    13981 tggacataat gctgtggcat ttgtatttac tgtgggtatt attgctcaaa tttattactt
    14041 cttgccaaaa gaaagtggtc agccgatttt ctcttataaa ctctctttat ttgcattttg
    14101 gggcttaatg tttgtttatc tttgggcagg tggtcaccat ttgatttatt caactgtacc
    14161 tgattggatg caaactatgg gttcggtttt ctctgtagta ttgattttac cttcttgggg
    14221 ttcagcgatt aatatcttgc ttactatgaa aggtgagtgg agtcagcttc gcgagagtcc
    14281 gttgattaaa tttatgattt tggcatcaac tttctatatg ttctcaacac ttgaagggcc
    14341 aattctttca attaaatctg ttaatgcttt agcacacttt acagattgga ttccaggaca
    14401 tgttcatgat ggaacattag gttgggtagg atttatgact atggctgcgc tttatcatat
    14461 gactcctaga gttttcaaaa gagagcttta tagcaaatct ttaatggaag ctcaattttg
    14521 gatccaaacc acaggtatag ttctttattt tgcttcaatg tggattgcgg gtattactca
    14581 aggtatgatg tggagagcga cagatgagta tggtaacttg ctttatagct ttattgatac
    14641 tgttgtggct attgttcctt attattggat tagagcgatt ggtggattgt tgtatcttat
    14701 cggtttcttt atgtttactt ataatattta caaaacaatt gcttgtggaa gagtgcttga
    14761 taaagaacca aaaagcgctt cgcctatggc agcataaaaa ggagaaaata tgtttagttg
    14821 gttagaaaaa aatccattct tttttgctgt agctgttttt gtagtgattg cttatgcagg
    14881 catagttgaa gttttaccaa attttgcaga aaatgcaaga ccaattgaag gtaaaaaacc
    14941 ttatacggtt ttacaacttg cagggcgtgc agtatatatt aaagatagtt gtaatgcttg
    15001 tcattcacag cttattcgtc catttaaatc agaaacagac cgttatggta tgtattctgt
    15061 aagtggtgaa tttgcttatg atagaccttt tctttggggt tcaaaaagaa caggacctga
    15121 tcttgctcgt gtaggaaatt atagaacggc tgattggcat gaaaatcata tgtgggatcc
    15181 tacttccgtt gttccagatt ctattatgcc ttcatataag catatgttta aaaataatgc
    15241 agatattgaa actgcttatg ctgaggcttt aactgtgaaa aaagttttca atgttcctta
    15301 tgatacagaa aatggaacaa aacttggttc atgggaggat gcacaagctg aagtaaaagc
    15361 cgaagctcag gctatagttg atcaaatgaa aaatcaagaa gtaaaagatg cttttgctag
    15421 aggtgaaatc aaagaaatag ttgctttgat cgcttattta aatagcttaa agtaagatga
    15481 tggaacattt atcaatagtt tttgatgtga ttaaaaattt aatcacattt gatttagcaa
    15541 cagttcaaaa acatgagtgg gagattttcc aaggttatgg tttttttgca ctcgtgatgt
    15601 ttttgtcaat agtattatat gcgtatttgt atcatttata tagaacagaa aaaaaaggcg
    15661 agagaaatta tgaaaattat gcaaaccttg ccttaaaaga tgatattgat gatagtgtat
    15721 tagaaagtaa aaggagtgct taatgcaatg gttaaattta gaagataatg ttaatctctt
    15781 atctttaatt ggagctattt ttatcatttt aatcacactg gttattgtgg gtagaatgtt
    15841 taagcaaatg aaagaaaaga aaggcgagtc agagcttagt gaacatagtt gggatggaat
    15901 aggagagtat aaaaatgctg ttcctactgg ttgggctgtg gtatttttcc tgactattgt
    15961 ttgggctatt tggtattttc tatggggata tcctttaaat tctttttcaa gtataggtca
    16021 atataatgaa gaagtagcaa ctcataatac aaaatttgaa gaaaaattta aaaatttatc
    16081 tcctgaagat aaaatagcaa tgggtcaaaa tatcttttta gttcagtgtt cggcttgtca
    16141 tggaattaca ggagatggta tcaatggtaa agctcaaaat ttaaatattt ggggtagtga
    16201 agaaggtata atcaatgtaa ttaaacatgg ttcaaaaggt atgaattttc caggtggaga
    16261 aatgcttggt gctgctgatt taggtgtagc agaagaagat atccctgcta ttgctgctta
    16321 tgtagcaaaa gatctttcag ctattaagaa aactgcaaat gaaaatttag tagcaaaagg
    16381 taaagaagct tatgcaactt gtgcagcatg ccatggagaa gatggaaaag gtcaagatgg
    16441 aatgttccca gatcttacaa aatacggttc tgcagctttt gtagtagatg ttttacatag
    16501 tggtaaggct ggttttatag gaacaatgcc gagttttcca acacttaatg atattcaaaa
    16561 agaagctgtt ggcgagtatg taatttctct ttcagggggt gaatgatgga aaataataat
    16621 agatgcgtgt tttctctttc aggtgttaca ggtatgttaa ttgctacggt tttgttgctt
    16681 gctatcttag cagttttaac tatttggggt cttaaagctc agcaagaagt gatgcaaaag
    16741 ccatatagtc ttaaagatgt acaaagtgta aagatgtttg gttcaaaaga acaagatcat
    16801 agaagtataa aggaagcaca atgagtaagg ctttggaata tttaattgtt attggtttag
    16861 ttgttgctgc tgcaatcacc gcttggtcgg ttttgaccgt aaatcatctt catataggat
    16921 gaaaaaaata ttacaagatg gctttttttt agctatcttc ttctttgttt tattgccttc
    16981 tagggttttt gctcttgatg ctgtactttt taatgaaaat attttaagtc aaaaagtaag
    17041 taacgagatt aatcttatag gaaaagagct ttaccaaaaa agtaatattt ttatcggcgt
    17101 tatggttggt gataaaactg aaattgaaac tttattaaat aaacaaaaag aacttcctca
    17161 gtcttatata ttgcttcttt tgtcaaaaaa ttctcacaaa gttgatatag tgggctcaaa
    17221 aggtgcttta gctttgattg ataaagaagc tgtgcttagt ccttatcctg gaacaggatc
    17281 tattttgccg atattagcta caaataaagg tgatatttat aatgctgcta tacttaatgg
    17341 ttatgcagat attgtagatc gtgtggcaaa atccttggga ttacaattag aacattctat
    17401 aggtaatgca aatcgtgata ctatcaatat tttaagaata cttatctatg gatttatttg
    17461 ctttgcattg ttatactatg cacaaagaag aataaagagg aaaaaaaatg ttagaaacta
    17521 aaaaaagttt ttggccttat ggtattttgc tttcactttt ggctataatt attgcttgta
    17581 ttgtaacgat ttttatagca agtcaccatc ctgtgtatga ggatgatttt tattttgact
    17641 cttatcaaaa tgttgaaaat aattacaatc aaatacaaaa acaacaagta aattttgata
    17701 aattttttaa agtaaatttt caaaatgata aaatcacttt tataggtaaa agaaaaattc
    17761 ctagttatga agtggatcaa aattcctatg ttgcaaattt taaaatttct gcattacaaa
    17821 atataaattc taatgattta aaagttcaag ttcttcttac aagaccattc actaaaaatt
    17881 ttgatcaaaa gttagaagga caagttaaaa atggaatttt aagtatcgct ttacctaaat
    17941 tagataaagg tagatgggag cttaagctaa agttttatgc aaatcaagaa acagtgggtt
    18001 tttttagcta cgaattaaat gctcaatgaa attaagaatt tttagctctt caaggcaaat
    18061 tagagaatat tataatcaaa aaaaacagca aaatgcttta ttagatagtg ctattcatat
    18121 aggtgaattt ttagataaag tttgtttgag caattttcat aaagcaagtt cttatgaaag
    18181 tttgctttta atgcaagaag cttgtctaaa aagtaaggat ttagaaaaaa aactaggaat
    18241 ttcggtagaa ttttttgctt ttttgaaaaa taacgaatat cttttttctt tttttaaaga
    18301 actgagtttg gaaaaaaaaa gcatagaaga tcttaaaaac aatgattatt atgccaccta
    18361 taatgaacat ttggaaattt tagatgaggt atataagaat tatcttgctt tgcttgaaaa
    18421 gaattctttt tatgatgatc tttctttacc taaaaattac acttttaata aagatttttt
    18481 agatgagtat gaagctatag tttatgattt gcaaggtttt ttaagtaaat ttgaagaaaa
    18541 tttattaagt gaaatttctc agattaaaga agtggtttta agttttaaaa cgagtaaatt
    18601 taatcttgaa tatcttttaa aacttgattt tttaaaaata tttgatttaa aaataaacac
    18661 tcattatgaa atcaatcttt caaaacaaga gatcttaaaa gaagaaattt ttaaaacaaa
    18721 aaattcaaaa atgaaactca aatcttttga attaagggct ttgcaatgtg cttttgttat
    18781 ggatgaaatt tcacattttg tacgcaaagg tttaaagcct gaaaatattg cagttataac
    18841 tccagatgaa agtttttgtg agtttttaag actttttgat aaagacaata tgcttaactt
    18901 tgcaagtgga attagtatta aagagagttt gttttatcaa aaatttcaag cactttatga
    18961 aagtgctagt agtgcttctt ttgtctataa aaatcaagag gattattttg aagacacgca
    19021 gatgatgttt gattatcaca atacgctttt acattcttta aaacttgatt ttatagagtt
    19081 taaaaagtat tttgatgaga aatgtgattt tgaatatttt gaaaaattac ttgctttgtt
    19141 tttagaaaat gaaaagcaag agcttattta tttgatacga aaagaacttt attttattaa
    19201 agatttattg aaaaatcagt ctttaactct taaagagttg atccatcttt ttttcatgca
    19261 aatttcacaa ctttccctta gtgatgtagg tggaggtaag gttacggtaa tgggactttt
    19321 agaaagtcgt gggctttgtt ttgatggagt gattttggtt gattttaatg aagaatttat
    19381 tcctaaaaga agtgttaatg agcttttttt aaacaatgaa gtgcgtaaaa aagcaggatt
    19441 gattagctat gatagaagag aaaatttaca aagattttat tatgaaagct tgatgaagaa
    19501 tgctttagaa gtaagtattt gctttgtgga aaatgaagaa aaaagcaaat cacgtttttt
    19561 agatgaactt gattttgact ttttttatga aactcatatc caccaaaaag cttatcttaa
    19621 tgctttaaaa ttagactatg aaggcataaa acctaatcta actcctataa aagctcctat
    19681 tttaaagcat aatcctttcg agtttccgct ttcttttagt cgttttaatt tattggaaaa
    19741 tcaaaaaaga acttattatt atcgttatat tttaaattta gcagaaccta gggttttaag
    19801 cgaggaaagc aaagcgaaaa atcaaggaaa ttttatccat aaaatgcttg aaatttatta
    19861 taaaaattat gcaaataatg attttgatat aaacgttttt gcaaatttat tggataaaga
    19921 atatcaaaaa tacaatatca gtgaacttga tcttgaagta tttaaattaa aatttataca
    19981 atttgctaaa aatgaaaaag agcatttttc aaaaggcttt tatgtcgcat atacagagct
    20041 tgagttaaac aatattttaa agctcggaac agatagtata aaacttaagg gtactataga
    20101 tcgtatcgat agttcaaaag aaggtaattt gattattgat tataaaagtg gaaaagtgcc
    20161 aagtaattct tatcaacttg ctttttacca agctttatat gatgaaaatg caagcgtggg
    20221 tttttatgat ttaaatagta tgcaaatatt gcatcaaaaa gccaaaagtt tagatgagct
    20281 aagagaaaga cttaaagatt tagttcttat gagtaaggaa gaaatagagt ttgaaaatga
    20341 acaagatgag tattgtcctt ataaactcat ttataaaaag gaattaaaat gagtcaattt
    20401 gagccttttt tggcattaga agcgagtgca ggaagcggaa aaacctttgc cctgagtgtg
    20461 cgttttgtag cacttatttt aaaaggagct aggattaatg aaattttagc tttgactttt
    20521 accaaaaaag ctgctaatga aatgcaaaaa agaattattg agactttttt aaacttagaa
    20581 aaagaaaata aaaccagtga atgcaatgaa ctttgcaagc ttttaggtaa agataaagaa
    20641 gagcttattt ctttaagaga tgctaaaaaa gaagaatttt taagaacaga gttaaaaatc
    20701 agtacttttg atgctttttt cggaaaaatt ttgcgtgttt ttgctttaaa tttgggctta
    20761 agtagtgatt ttacaatgag tgaagagagg cttgatgtaa gagagatttt tttaaaactt
    20821 cttaaaaaag atgaattaaa agatttggct tattatatta atttagttga tgagaaagaa
    20881 aattttttta acgagcttga aaaattttat gagaatgctt attttcaaaa tcgtcctaaa
    20941 attctaaatc caactaaagc ttatatcaat aaagcttata gtgagttaag aagttattgt
    21001 ttgggtctta ctcatgtaaa aaattataaa aatttgtgtg acaatttcaa aagtgaagtt
    21061 ttagatttat ccgtgtttat gcaatcaagt tttatgacaa aatttgaaag tacaaaatat
    21121 ttacaagatt tagaaagtat taacttgcat tttagtgcaa aaagaatgga gcttataaat
    21181 gctttaaata cctatgctat agagcttgaa aattataaaa ttgctaattt aatgaatctt
    21241 ttaaatcatt atagtgaagc taaaaatata tttcataaag ataaaaatac cttaaatttc
    21301 caagatgtga gtaaaaaagt ttatgagtta ataaccagtg aatttaagga tatgatttat
    21361 tttcgtttag atggttttat ttcgcatttg cttattgatg aatttcaaga tacaagcgtg
    21421 atccaatatc aaattttacg ccctttgatc gctgagcttg tttcaggaga aggggttaag
    21481 aaaaatcgca ctttttttta tgtaggagat aaaaaacaaa gtatttatcg ctttcgtaaa
    21541 ggaaaaaaag aattatttga tttgttaaaa caagaattta gtcaaattaa aagtgataat
    21601 ttaaatacta attatcgttc taaagagctt ttggttgatt ttgttaatga aacttttaaa
    21661 gaaaaaatca aagattataa agaacaattt gccttagaaa gtaaaaaagg cggttttgtg
    21721 cgtattgtgg agtctaagga acaaaaggtt aaaaaccaag cccaagaaat taaggaaaag
    21781 actttagaaa ctttatttga gcaaattaat tttttaagat ctaaaaatat ttcttatgat
    21841 gatatttgta ttttgtgttg gaaaaatagt gatgcagata tggttttgga ttttttaaga
    21901 gagcaaaata ttcctgcatt tactcaaagc aatgttttac ttgaaaataa agcaagtgta
    21961 agacttgttt tagaatatgc taaatattgt atttttggtg atgagtttta cttggcattt
    22021 ttaaaggaac ttttaggttt tgagccgaga aaaattaccc ttgatttttc aaaaaatgct
    22081 atggaaaatg tacttttttt aataaaagaa ttaaaacttg atttaaatga tatcgcttta
    22141 atacaattta tcgaatatgc taaaactaag gagaattttt taaagctttt atttgagcct
    22201 tgtgctttga aaatagtaag cgaacaaaat atgggaatta gtattatgag tgtgcataaa
    22261 tctaagggtt tggaatttga tcatgtgatt ttacttgata gtttatctaa aaacaattca
    22321 aacaatgaag atatcatgct tgaatatgat atcaatcaag gttggcaact ccatattaaa
    22381 gataaaattc gagagcttac taaagagcct atttatactc tttttaaaga aaatattaca
    22441 agagcaaatt atgaagatga tattaataaa ctttatgtgg cttttacaag agctaaggaa
    22501 agtttgatca tcataaaaag aaatgaagaa agtgtaaatg gaaattatcc aagttatttt
    22561 aaggggggat ttttaaatat acattctcaa gagagaggtt ttttagaaag caaagaacaa
    22621 attttaagcg ttaaaaaaga aagcattcaa actttgcaaa aatttgaaaa aattaccttg
    22681 caagaaattc aaagtgaaga aaggcttgat agtaaagaac tatattttgg aaatgctttt
    22741 cactttttta tgcaaaattt aaaacttcct aagggtgaaa attttcaaat acttactcaa
    22801 agatgcaaga gtaaatttag acatttttta gatgagagtg attttgaaaa gctttttaaa
    22861 agaattgaaa ttttacttaa aaatattcaa tttcaaaatt tgattggtga tggaaagctt
    22921 ttaaaagaac aagctttgag ttttaatgga gaaattaaac aattagactt gcttgcttta
    22981 aaagatgaag aagctttcat aattgattat aaaacaggtc ttgctatgca agataaacat
    23041 aaagagcaag taagaactta taagattgcc attagtgaaa ttttgaaaaa agataaagtg
    23101 cgtgctttta tagtttattg tttggaaaat gaaattcaaa ttttggaaat ataaacttta
    23161 tttttactta aattaagtaa aaattaatat tattttttat acaatcacat tttaaatttt
    23221 tggcaaaggt aaaaattatg acaaagataa caaagccaaa cgaagtaaaa cgagaatgga
    23281 ttgttttaga cgcagaaggc aaacgctttg gtcgtctttt aactgaagta gcaacaattt
    23341 tgagaggtaa aaacaaacct tgctttactc caaatgttga ttgtggtgat tatgtaatta
    23401 tcatcaatgc ttcaaaagct gtatttacag gtgctaataa agcagaagat aagctttatc
    23461 atagacattc aggatatttt ggaagtgtaa aaagcgaaaa atttggtgat ttacttgaaa
    23521 aaaatcctgc aaaattatat aaattagcag ttagaggtat gcttcctaaa acaaatttgg
    23581 gcagagctat gcttaaaaaa ttaaaaatct atgcgggtag tgagcaccca cacactgcac
    23641 aaattgctaa agaaggaaaa taatcatggc aacaacatac gcaacaggta agagaaaaac
    23701 tgctatcgca aaggtatggg taaaaccagg tagtggtaaa attagtgtta atggtgttga
    23761 tttaaacact tggcttggtg gacacgaggc gattaagctt aaagtggttc aacctttact
    23821 tgtgactaaa caagaaactt caatggatat taaagcaact actttaggcg ggggctatag
    23881 tgctcaagct gaagctttaa gacatggaat ttcaagagct ttagcagcta tggatgctga
    23941 ttttagagcc ttattaaaac ctaaaggact tcttactaga gatagtagaa ctgttgagcg
    24001 taaaaaatat ggacgccgca aagcaagaag aagcccacaa ttctctaaac gttaatattt
    24061 ttggtgggat tttcccacct ttctacaatt ttttataaaa ctcatccttt tttctatcat
    24121 ttatgttata attgcaaaat ttaaattttt attttataac acaatgaaag gttttttcta
    24181 tgaaaaaaat attcttatgt ttaggtttgg caagtgtttt atttggtgct gataacaatg
    24241 taaaatttga aatcactcca actttaaact ataattactt tgaaggtaat ttagatatgg
    24301 ataatcgtta tgcaccaggt gttagacttg gttatcattt tgacgatttt tggcttgatc
    24361 aattagaatt tgggttagag cattattctg atgttaaata tacaaataca aataaaacta
    24421 cagatattac aagaacttat ttgagtgcta ttaaaggtat tgatgtaggt gagaaatttt
    24481 atttctatgg tttagcaggt ggaggatatg aggatttttc aaatgctgct tatgataata
    24541 aaagcggtgg atttggacat tatggcgcgg gtgtaaaatt ccgtcttagt gattctttgg
    24601 ctttaagact tgaaactaga gatcaaatta attttaatca tgcaaaccat aattgggttt
    24661 caactttagg tattagtttt ggttttggtg gcaaaaagga aaaagctgta gaagaagttg
    24721 ctgatactcg tccagctcca caagcaaaat gtcctgttga accaagagaa ggtgctttgt
    24781 tagatgaaaa tggttgcgaa aaaactattt ctttggaagg tcattttggt tttgataaaa
    24841 ctactataaa tccaactttt caagaaaaaa tcaaagaaat tgcaaaagtt ttagatgaaa
    24901 atgaaagata tgatactatt cttgaaggac atacagataa tattggttca agagcttata
    24961 atcaaaagct ttctgaaaga cgtgctaaaa gtgttgctaa tgaacttgaa aaatatggtg
    25021 tagaaaaaag tcgcatcaaa acagtaggtt atggtcaaga taatcctcgc tcaagcaatg
    25081 acactaaaga aggtagagcg gataatagaa gagtggatgc taaatttatt ttaagataat
    25141 gaataaaact attttatttg atttagatgg cactttaatt gattctactg atgctatttt
    25201 aaattctttc caaggagctt ttaaagccct tggattaact tctaaaaata atgaagaaat
    25261 caaaaatctc ataggttatc ctttagagca aatgtttaga atgctttatc cagataaagt
    25321 aaatttaagt aaagaatttg tattagctta tcgtgaaatt tatgcacaaa tttatttaga
    25381 acaaaccact cttttgccta aagcaaaaga agcattagaa cttggaagcg aaattgcaga
    25441 tcttggtata gttacaacaa aaggaggtaa atttactccg attctacttg attatttggg
    25501 agttaaaaaa ttctttaaaa ctttaattac tcttgaagat gtcacaaatc caaagccaag
    25561 ttccgaacct ataattttag ctttaaaaag actcaataaa actcaagaaa atgcctatat
    25621 gataggcgat acaatattag atattcaagc tgcaatttct gctaatatca ctcctttggc
    25681 cttaacttgt ggttatggca atgaaaatga attaaaatcc cattctatgg tatttttaaa
    25741 tgcatatgag gctgttactt atatagctag attataaact aatttcaagt tttcattaaa
    25801 cgccttttaa gagaatttat agtaaattga tagctaaaaa attataaaaa ttatcaatat
    25861 aaaggaaggt ctcaatgggt aaaattatga aaactatgga cggaaatgag gctgctgcat
    25921 acgctgcgta tgcttttact gaagttgctg gaatttatcc tattacacct agttctccta
    25981 tggctgatta caccgatatg tgggcagctg caggcaaaaa aaatcttttt ggagttcctg
    26041 taaaaatcgt agaaatgcaa agtgaagcag gtgctgcagg tagtgtgcat ggatctttac
    26101 aagctggggc tttgactaca acttatacgg cttctcaagg attactcctt aaaattccaa
    26161 atatgtataa aatagcaggt caattgctcc cctgtgtaat ccatgtagca gcgcgttctt
    26221 tggctgctca agctttgtct atctttggcg atcatcaaga tatttatgcg gcaagacaaa
    26281 ttggttttgc tatgctttgt tcgcattctg tgcaagaaac catggactta gctggtgtag
    26341 cacatttagc tgcaattaag ggaagagtgc catttttgca tttttttgat ggttttagaa
    26401 caagccatga aattcaaaaa gttgaagtga tggattatgc gcattttgat agattattag
    26461 atagagaagc tttgcttgaa tttagaaata atgctttaaa tccagaaaat ccaaaaacac
    26521 gtggaacagc acaaaatgat gatatttatt ttcaaactag agaagtaagc aatcgttttt
    26581 atgatgcttt gcctgatgtt gttaatgaat atatgcaaga aatttcaaaa attacaggta
    26641 gagaatacaa accatttact tattatggac acaaagagcc agagcgtatg attgttgcta
    26701 tgggttctgt aactcaagca cttgaagagg tagtggacta tcttaatgct aagggtgaaa
    26761 aggtagggat tttaaaagtt tatctttatc gtccatttag tttaaaatat ttctttgatg
    26821 ttatgccaaa atcagtgaaa aaaatcgcgg ttttagatag aaccaaagaa ccaggaagtc
    26881 ttggggagcc gctttatatt gatgtaaaat cagctttcta tggaagagaa aatgctcctg
    26941 ttatagtggg tggaagatac ggactttctt caaaggatgt tgatcctgct caaatgatag
    27001 cagtatttga aaatcttaaa cttgataatc caaaagatgg ctttactgta ggtatagttg
    27061 atgatgtaac tcacacttca ctgagtactg gagagaaaat ttcacttgga gatgaaagta
    27121 cgatcgaatg tttattttac ggacttggtg ctgatggaac tgtgggtgca aataaaaact
    27181 cgattaaaat tatcggggat aaaacggatt tttacgctca agcttatttt gcttatgatt
    27241 ctaaaaaatc agggggttat acaagaagcc atttaagatt ttctaaaaaa cctatccgtt
    27301 caacttatct tgtctcaact ccgcatttta tcgcttgttc ggtagcggct tatttggaaa
    27361 tttatgatgt tttagcagga attcgcaaag gaggaacttt ccttttaaat agtatttgga
    27421 atgctgaaga aaccataaga caacttccag atgcagtaaa gaaaacttta gctgaaaaag
    27481 aagtaaattt ttatatcatc aatgcaacca aactagctcg tgatataggt ttgggaaatc
    27541 gtacaaatac cattatgcaa tcagcctttt tcaaacttgc aaaaatcatt ccttatgaag
    27601 acgcacaaaa atacatgaaa gagcttgcgt ataaatctta tagtaaaaaa ggcgatgcta
    27661 ttgtagaaat gaattacaag gctattgatg tgggtgctga tggacttgta aaagttgaag
    27721 tggatccaaa ttggaaaaat ttagagctta aagaaaaaga acaaaccaat gcctataaag
    27781 gtactgaatt tgttgaaaaa atcgtaaaac ctatgaatgc ggctaagggt gatgatttac
    27841 ctgtttcagc ctttttaggt tatgaagatg gaagttttga acacggcaca accgaatacg
    27901 aaaaacgcgg tgttggggtt atggtaccaa gatggataga ggcaaattgt atccaatgta
    27961 atcaatgtgc ttcagtttgt ccgcatgctg ttatcaggcc atttttgatt aatgatgaag
    28021 aaatggcaaa tgcacctcgc ggtgtaaaag atcatgcttt agaagctaaa ggaaccaaag
    28081 gagaaaaatt aagctttaaa attcaagttt ctccacttga ttgtacaggc tgtgagcttt
    28141 gtgttcatga gtgtcctact aaagaaaaat ctttggttat ggtaccactt caagaagaga
    28201 tggattttgg tgagcaagaa aatgcggatt atttatttaa agaaatcaca tacaaagatg
    28261 atattttaaa taaagaaact acaaaaggag cacaatttgc ccaaccttta tttgaattcc
    28321 atggagcttg tcctggatgt ggagaaactc cttatattac tttaattaca agattgttcg
    28381 gtgaaagaat gattgtggct aatgctacag gttgtagttc tatttatggg ggttcagctc
    28441 catcaactcc ttatagaaaa agtgtgaaaa atggacatgg tcctgcttgg ggaaattcac
    28501 tttttgaaga caatgctgag tttggtttgg gtatgaaaat tgcaactgaa aacacaagac
    28561 accgcattga acatatcatg aatgagagta tgcaagaagt tccaaatgct ttatcagccc
    28621 tttttaaaga ttggattgca aataaagaca atggtgctat gtctgtggaa attaaagata
    28681 aaatgatccc tattttagag caaaataaaa atattaaagc tgtacaagat atattagagc
    28741 ttaaacagta tttaagtaaa aaatctcact ggatttttgg tggtgatggt tgggcttatg
    28801 atataggcta tggcggactt gatcatgttt tagcaagtgg agaaaatgta aatattttag
    28861 tgcttgatac agaagtttat tctaatacag gcggtcaaag ttcaaaatct tctagaacag
    28921 gagctgtagc acagtttgca gcagcaggca aacctataca gaaaaaagat ctaggtcaaa
    28981 ttgctatgac ttatggttat atttttgtag cacaagtaaa ttcaacggca aattatactc
    29041 atcttatcaa agctatcact gcagctgagg cctatgatgg accatctttg gtgatttgtt
    29101 attctccttg tatagctcat ggtattaaag gtgggctggg ttactcagga gagcaaggtg
    29161 agcttgctac aaaatgtggt tattggccac tttatacctt tgatcctcgt ttagaagagc
    29221 aaggaaaaaa tcctttaact ctaacaggaa aagaacctga ttgggattta tatgagcaat
    29281 ttttaatgaa tgaagtgcgt tataattcac ttaaaaaagc aaatcctgaa cacgctgttg
    29341 agctttttga acgcaataaa aaagacgctc aacgtcgcta tagacagctt aagcgtatcg
    29401 ctatggctga ttatagcaat gaggtcgaaa gctgataaaa tatattttta gtgctacatt
    29461 gtgttttagc actttgtttg cacaagataa ttttgaagag tattttaaac ttatagataa
    29521 agaaaatcgt ataaatttta atactcttca aaacccattt gtgaatccta cttttgaaaa
    29581 attaagacat attaaaatta ctgcaattat gcttgataaa gtaaaaattt atgatcgatg
    29641 gtataaaaaa ggtgatatga ttgatgatgc tataatatat gaaataaata ctaaagagat
    29701 taaattccaa tatgataatt tagaaattgc aatccaaata aataaaaatg ataagattaa
    29761 tattaattaa cattcttttt tgccattatc tttatgcttt agattgtcaa aagcgtcttt
    29821 ttgatatcag tattaatgaa aaattaagca tacaagaaag tcttgatgag cttgcaaaat
    29881 attgttcttt tagtattatt gttaaagata aaattgccaa agaaaaatta gaaatattgc
    29941 aaaactctgt caatattcat caaatgagtt tagacgaaat ttttaatttt tttatcaaag
    30001 agcatgatct tagctatgat tttgatggta aaattttaag aatttcaggc attaatacga
    30061 agatttttaa gataagttat atcacttcta tcagagaagg acaaagcata actaaagcgt
    30121 ctgtagacgc taaaccaagg caaagtgaat atagcggtag ttttgatgac gcagaagaca
    30181 atatgattaa aagtatggaa aaatttgatt tttggcaaaa tatagaaaaa gagattattg
    30241 tattattaaa aaattctcat gaagattatg aggctaaaac tcccattata aatcccaatg
    30301 caggtcttat tatagtaact ggaacaaatt ctcagttaaa aagtgtgaaa aattatttgc
    30361 aaaaactaga aaatcgtctt aaaaaacaag ttattatcga tgttagcata cttgctgtga
    30421 gtttaaatga aaaccattct agtgggatta attggcaaaa ttttaatata ggtttaaatt
    30481 cgcaagtaaa taatgaaaat tcttttattc agtttcaaaa tgggcaaggt tttgttaaga
    30541 atttgggttt aagggcgaat ttaaattttg attctattat taactttctt tctcaaaatg
    30601 gaaaaactag cgtgctttct aatccaaagc ttatggcttt aaataaccaa caagccatta
    30661 tttctgtagg tgatactata aattatcaag ttaaagaaag ttctaaaggc actgaaaatg
    30721 ggactactgt tagtgaaagt tataacaatt attctatttt tgtaggcatt ttactcaata
    30781 tcttgcctga aatttctgat gatggaaaaa taatgctcag gattaatcca agcttaagtg
    30841 attttaagta tccagaagat aataaacgac aaaaagaacc aagaactatt gctcctgata
    30901 ccatacaaaa aaagctttct agtgttgtgc aagtagagaa taatcaaact ttaattttag
    30961 gtggattgat ttctcacgat aaatctaatg agaaaaattc tatcaatttt ctatcaaaaa
    31021 ttccaatcct aggttctttg tttaaaggag aagttttaaa ttctaaagca accgaaattg
    31081 tttttattat cactccaagt atagtagata gtgtaaatgc tccaagtctt aaagatctag
    31141 gatttaagca ttatgagtaa aattattcca tttagagaag aaatttttca tcaaatcaat
    31201 caaattttag aaagccaaaa agcttttatt tttttatggg gaaaaagtgg tagtggtaaa
    31261 agtgtattgt tgcaaagatt ggcaaaaaaa tataatgttg attttattaa tgaaaatttt
    31321 aaagatcaga gtttcttaaa agaaaaaatt gagtttttga tttcacaagg tcagagttta
    31381 atcattcttg atgaagtggg aatgtatgat tatgcaatgc tagaaagcat caggatttat
    31441 agtgattcta taagttttgt tttaagttct cataaaaagt taaatatact taaaaaagag
    31501 cattttaaaa gtcgtttaag tgcttgtttt aaattgaaaa atattagtct tttagaactt
    31561 gatgattata ttaaattgaa atttggaatg aatttttcaa ataaatgtct taagttttta
    31621 caaaaaattt ctcaaggaaa tttaagatat attgataaaa ctttaaaaag tttttatgag
    31681 ataaatagtt tttttgataa aaacaaaagt caagagtata ttttaaagct tagtgcttta
    31741 gagaatggct tattaaggta agatatgcaa gaaagaatta aagagcttga gctta
//
LOCUS       DAPIWB010000011        29297 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.011, whole genome shotgun sequence.
ACCESSION   DAPIWB010000011 DAPIWB010000000
VERSION     DAPIWB010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 29297)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29297)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29297
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.011"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            73..435
                     /locus_tag="RJ266_000414"
     CDS             73..435
                     /locus_tag="RJ266_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDV7354194.1"
                     /translation="MSNYPKAIGPYSAYREANGLLFISGQLPINPASGEIESSDIKEQ
                     TKQSLKNIGAILEENGISYDKVIKTTCFLADINDFVAFNEIYAEFFKAPYPARSAFAV
                     KDLPKKAKVEIEIIAQKG"
     gene            439..1878
                     /gene="dcuC"
                     /locus_tag="RJ266_000415"
     CDS             439..1878
                     /gene="dcuC"
                     /locus_tag="RJ266_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DcuC"
                     /protein_id="HDV7354195.1"
                     /translation="MLGIVFSLFSVFLLVFMLYKKINAHMALLLSGLLLLSLATIFGL
                     SPHIVVKGSLNFGFFDIFQVFNQTMSSTLAGLGLTLMCIAGFSAYMDHVGASYALFKV
                     FEKPLKAVKSPYVLLIVAYFIVQFLVLFIPSHAGLALLLMVTMYPILVRSGVSKLSAL
                     SVIAICQYIDHGPGSGNVIMASKVAEVDPAIYFVHYQLPTTLPIIIAVGIAIYLCNKF
                     FDKKDNFVFNAQEIEKELNENEGKEKELKKPPRIYAILPIIPLVLILGFSSVLDSILV
                     LMGISSAEEVKAAASTAIKMNVPVAMVISTFVAIIFEMIRYKSIVETLNSIMIFFKGM
                     GHLFVITVSLIVCGQVFASGLLSVGFVDTLIEFCKNAGFGVLAIIIAVSILLAVCAFL
                     MGSGNAAFFSFAPLIPNIAKHFGVETITMIAPIQIMTGFGRCVSPIAPAILAISAIAK
                     VSPFAVVKRTAIPMLVAAIVNVIMTYIYL"
     gene            1891..3054
                     /locus_tag="RJ266_000416"
     CDS             1891..3054
                     /locus_tag="RJ266_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HDV7354196.1"
                     /translation="MNSKTKLIHCGRGDQGAEVRSVNPTLMRASTILFKDHATWQKYR
                     ELRKTDRVLSYGARGTTTNFELEKLICTLEGGYRAQLFPTGLAALAMVLLNYASKDAH
                     FLITDAIYGPVRTICELFLEKMGVEIDFLKADASDVEEKIKPNTKLILCESPGSILYE
                     IIDLPKLCKIAHAHNIPVAIDNTYSSGYFLNPLELGVDISVIAATKYLSGHSDVTMGI
                     VVINEKEWKNFDKLPEALGFTTSPDDAYLVLRGMRTLDVRMKAHEKSADEIVEFLQSR
                     KEIKTIFYPKLKSHPNHEIFMRDHKGANGMITIEFAEGYSKDDAIKFVDKLEYFSIGA
                     SWGGYESLATVTTPPRTATDWSARGPFVRFHIGLEDTKDLIADLTQAFDSIKK"
     gene            3064..4431
                     /locus_tag="RJ266_000417"
     CDS             3064..4431
                     /locus_tag="RJ266_000417"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDV7354197.1"
                     /translation="MTGISVFDHRLLADSWSTQEMRAIFCEQNRIQKWLDVEAALAKA
                     QAKLKIIPKKAADEIAKKAHYKFMDMDFIFAEFKKTKHPLVPTVRGLEKACDNNLGEY
                     VHFGVTTQDIIDTGLVLQFKEAMTLIKSELKAIAKALAKLAKTHKNTAMMGRTLALQA
                     LPITFGHKVAIWLSELERHFERILELEKRLYVGSIVGAVGTKASLSDECNEVEKLTLE
                     NLGLDVPNISWQPARDRFIELGFVLGNINTTFNKIAHEILILSHNEIDEVAEPFGKGQ
                     VGSSTMPHKRNPAVSENAVTVSNAFKANLAILSDIERHEHERDGQVWKMEWKLLPEMF
                     LMLSVVLANMKFALSDLEVKKDKMLKNLNTLNGFVLAERVMFALSDHYGKQHAHEIVY
                     ENAMLGIEKQKTFKEVLLADKRVSKVLKEKEIDALLDATSYVGYAPKLVDEFLAKIKN
                     SAILK"
     gene            4440..5780
                     /locus_tag="RJ266_000418"
     CDS             4440..5780
                     /locus_tag="RJ266_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HDV7354198.1"
                     /translation="MFYSEILADFIFNLKYENIPNAVVQRAKELMLDSLGTAIAASKE
                     ECVLNAFKAFENLSTEKNTPIWINDQKLDPIYAAMLDGIASHALDFDDTHTEAILHAS
                     AILTPLCLSYGFHVSKDAKKIIKAFIIGWEIAARVGIASKGTFHKRGFHTTAIAGIFG
                     SVSASAILLDLNKEQIINALGLAGSFASGVNEFLSNGSNSKVLHIANAIKNGIMVAHF
                     AKNNMSGPLSIFEGRDNIFKCFGIEEECDKTELNKALGEIWQTMQVSIKPYPSCHFAH
                     GLIDCAIALKNDGLKADEIKSIHCFVDEVPISFICDPLEAKYTPNSAYEAKFSMPFLM
                     ALGFFDGKITLESYENLKREEVLEFAKKISYKKRKSQGFPKYFPGHLEASLQDGRIIQ
                     KDVFINKGNFDNPLSFEELKAKFLANAQIYLDNAKANKILDQIINLENLNHFSF"
     gene            5862..6086
                     /locus_tag="RJ266_000419"
     CDS             5862..6086
                     /locus_tag="RJ266_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein A"
                     /protein_id="HDV7354199.1"
                     /translation="MTLNELKDGQKAIIVNLNAHKELKNRLLSFGFIKNKNLKKIHSS
                     LKNAIIMVELDTSCVILRSDEAKTIEVNLI"
     gene            6083..7924
                     /gene="feoB"
                     /locus_tag="RJ266_000420"
     CDS             6083..7924
                     /gene="feoB"
                     /locus_tag="RJ266_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HDV7354200.1"
                     /translation="MKKIKIALVGQPNVGKSLLINALCKANMKVGNFSGVTIEKASAK
                     TFYKNYEFEVIDLPGTYSLDGYSEEEKITRHFLNQNDYDVIVNVLDATNLERNLILSA
                     ELLSLNKKMLLALNMCDEAKKEGIELDTSILSQEFQSQVVEISAKTKENLELLLQKII
                     ILFESKFIPRSQFYTPLCEKSPEKEDLLYFINELSKKIITHKKEERNLTKKIDALLIH
                     KFFGLPIFLFLMWLLFQLTFSLGQIPMDYIESGFNALGEFVKNNISNTFIASALADGI
                     IAGVGAVILFLPNIMILFLGIALLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGF
                     GCSVPAFMATRTLKNKRDRLLTLFVINFMSCGARLPVYVLFIGAFFPSEKAGNYLFGI
                     YILGAILGLCAAKFLRMTAFRGLDEPFVMEMPKYRMPNWYLVWFMVYNKAKMYLKKAG
                     TFILLASLLIWFASNFPKSEENLNDFNAQERAIEQSYLGQFGKSIEPIFQPLELDWKL
                     SISLISGLAAKEVMISTMGVLYSLGKDVDETNNDLKGIIAKNIPIPSAVAFILFVMIY
                     NPCFAATIVFSKESGKLKYTLFLFLFTCTSAYIVAFIGLHIAKILLN"
     gene            complement(7921..9414)
                     /locus_tag="RJ266_000421"
     CDS             complement(7921..9414)
                     /locus_tag="RJ266_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HDV7354201.1"
                     /translation="MTKLSNEELKNILEDRIKKLENSTLKEDKVINEESVKILARHLS
                     LGNEIPALAQRFFQIAPKTKLVWLHLCECTGCSESLLRSELPSFDELIFDFFSLEYHE
                     TLMAANGTKAEELLEHVLEEDFILAVEGGVAAIDTFFLTIGAQGESGYEILEKLAAKA
                     KAIFAVGTCSSYGGIQAAYPNPSKTCGISEVLSQKVVNIPGCPPSDVNIIVTLSFFAL
                     FGVLPELDEQNRPVWAYGKCLHDMCERKAKFESGIFAEHFDDEAAKNGACLFKVGCKG
                     PYTYNNCPKVKFNAKTSWPVAAGHGCIACSEKNFWDEFGNYEKPMANIFSYAKLCNEE
                     LKQEFFLEEQIKILEQIDFEFESNIKLILQNIAKNKLGALLVENYKKSFEKNYTFIEQ
                     NFDENPMLSKDFWKYLEISFILVKGEFLKDKNDFLIAAKNYAFKHASPYDFKLNMNAE
                     KPKLDVSKSFRMTLIYLCGGLDFEGIAYSILKAFEDNITKISSLKAS"
     gene            complement(9418..10242)
                     /gene="fabI"
                     /locus_tag="RJ266_000422"
     CDS             complement(9418..10242)
                     /gene="fabI"
                     /locus_tag="RJ266_000422"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HDV7354202.1"
                     /translation="MIMKGKKGLIVGVANNKSIAYGIAKACFDQGAQLAFTFLNDALK
                     KRVEPIAQEFNSNFVYELDVNNNEHLDSIAEKIKKDLGEIDFVVHAVAFAPKEALENS
                     FLETSKEAFDIAMQTSVYSLLSLTRAVLPILKDKGSILTLSYLGGVKYVPHYNVMGVA
                     KAALESSVRYLARDLGVKGIRVNAISAGPIKTLAASGIGDFRMILKYNEINSPLKRNV
                     SIEDVGNSAMYLLSDLANGVTGEIHYVDAGYNIMGMGDVEKNEEGQTVLCWDNQKG"
     gene            complement(10246..10917)
                     /locus_tag="RJ266_000423"
     CDS             complement(10246..10917)
                     /locus_tag="RJ266_000423"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HDV7354203.1"
                     /translation="MIFAANLKCNHTRASFKIYAEILNKTIGVKCDDIIVFPPSIAFL
                     ENENNFIQGAQNFYPCVNGAFTGELGKEHLDEFGIKCVLIGHSERRALGDEELIGAKF
                     DFAKEHGYKIVFCIGENLDTKNSGKTLEFLKKQLEMIDLNYERLIIAYEPIYSIGTGV
                     SAQSTDIAKVLEFLASLTKVPLLYGGSVNENNIKEILSVNHCGGVLIGSAALKVENFI
                     KLIKG"
     gene            complement(10914..12116)
                     /locus_tag="RJ266_000424"
     CDS             complement(10914..12116)
                     /locus_tag="RJ266_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HDV7354204.1"
                     /translation="MSDIISIKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIP
                     TIRYCLDNGCSVILASHLGRPKEISSKYSLEPVAKRLARLLDKEIVMAKDVIGEDAKT
                     KAMNLKVGEILLLENLRFEKGETKNDENLAKELASMVQVYINDAFGVCHRAHSSVEAI
                     TKFFDEKHKGAGFLLQKEIDFASNLIKHPARPFVAVVGGSKVSGKLQALTNLLPKVDK
                     LIIGGGMAFTFLKALGYDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPAC
                     SQDVPMKFVPAQEIPNGWMGLDIGPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKG
                     SIKMSHYISEGHATSVVGGGDTADVVARAGDADEMTFISTGGGASLELIEGKELPGVK
                     ALRSKENE"
     gene            complement(12119..13117)
                     /gene="gap"
                     /locus_tag="RJ266_000425"
     CDS             complement(12119..13117)
                     /gene="gap"
                     /locus_tag="RJ266_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HDV7354205.1"
                     /translation="MAVKVAINGFGRIGRCVARIILERNDIELVAINDTTDIELTKYL
                     FKYDTVHGEFKGSVDSEGDDLVVNGKKIKVFKSRNVKDLDFAKHGAQIVLECTGAHLT
                     MAKCQEFIDMGVQKVIMSAPAKDDTPTYVLGVNSELYKGESIISNASCTTNCLGPVCR
                     VLQDNFGIEKGLMTTIHAYTNGQSIIDAKAKDKRRSRAAAQNIIPTSTGAAKAMKLVM
                     PELNGKLHGQSMRVPVIDVSSVDLTAQLSRKVSKDEINEAFRKAAATNLKGILMVDDD
                     ERVSSDFITCSYGAIVASDLTQVIADDFIKVIAWYDNEWGYSSRLVDMAVYIANKA"
     gene            13177..13722
                     /gene="nadD"
                     /locus_tag="RJ266_000426"
     CDS             13177..13722
                     /gene="nadD"
                     /locus_tag="RJ266_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HDV7354206.1"
                     /translation="MKIALFGGSFDPPHNGHNSVVLEALEKLDIDKLIIMPTYINPFK
                     KSFSADEKQRFLWVKKLWGHLPKVEICDFEIRQKRPVPSIESVKYLYKLYNPSKFYLL
                     IGADHLEKLHLWHDFEKLNSLVEFVIANRNDIGIPKNFKDLKTNKKIASSFIRDTLNT
                     NEVCEEIKDEVKKYYEKLQKN"
     gene            13750..14076
                     /gene="rsfS"
                     /locus_tag="RJ266_000427"
     CDS             13750..14076
                     /gene="rsfS"
                     /locus_tag="RJ266_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HDV7354207.1"
                     /translation="MQERIDLIVKILDEKKAENIKTIDMSEQEYFVKYVIIAATLGER
                     HALSLIDELKTQLKAKGEEFLNIDSSEEWSVIDLGDILIHLLTPEHRGIYNIEELLEN
                     LKKGRV"
     gene            complement(14109..14486)
                     /locus_tag="RJ266_000428"
     CDS             complement(14109..14486)
                     /locus_tag="RJ266_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002870609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1090 domain-containing protein"
                     /protein_id="HDV7354208.1"
                     /translation="MKKILILLTLCAFAFGASECDRKIDRINKEISFSKAHNDTARTL
                     SLELALKQVQNDCTKDPMFYDKKLEAKKLKEQEVEKIEKELDALKEQKDYMSKVEYKA
                     KKKALKEQKEKIKKEIEEYIDNL"
     gene            complement(14533..15903)
                     /gene="pgmL"
                     /locus_tag="RJ266_000429"
     CDS             complement(14533..15903)
                     /gene="pgmL"
                     /locus_tag="RJ266_000429"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase PgmL"
                     /protein_id="HDV7354209.1"
                     /translation="MLDVIFREYDIRGLYGKELNEKSVKAIGFCLGQTMLNKGCKNVS
                     VGYDARYSANELFNYLVSGLNKAGIKIYDIGLVPTPLGYFSLYEGLKFDANVMITGSH
                     NPKDYNGFKITINKESFFGVELKEFSKEVYKHLDDDIEENLEVEKYDILSLYVKFMCE
                     QFSFLKDFNYKFGVDCTNGAAGVVIEPLIKALNLKAHVMFAEPDGQFPNHAPDPTEEE
                     NLSAIREFLNQNQDYSLAFAFDGDADRMVALSKTHVFCGDELCYLFAKNIPNPRILGE
                     VKCSKNLFDEVAKFGTIFMGKTGHSNIKKMMKEKDIDLAAEVSGHIFFKHRYFGYDDG
                     IYAFLRALELVYKGFDLESMIKALPKLYTTPEIKIPVNEEEKFKLVEEFQKEIEKGAL
                     KGVKSLCEIDGARIDFGDGWALLRASNTSPYLITRFEATSLERAKELESMVFTLFNDI
                     KARFKN"
     gene            16025..16561
                     /gene="fliL"
                     /locus_tag="RJ266_000430"
     CDS             16025..16561
                     /gene="fliL"
                     /locus_tag="RJ266_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated protein FliL"
                     /protein_id="HDV7354210.1"
                     /translation="MDEELENEETKKKKGGSLVIIIVILLFVLLLSIMGVIAWLISSS
                     SSDESEVKEAPKEEAKADKPKVSAPTQRGSDFANIGPMYPLDPFTLNLLSDSGSRYVK
                     CTIELEQNSELLKPELDKKVPVIRDIIIRTLTAKTFEEVSTQKGKERLKDELVGKINE
                     ILTDGFIKNVYFTDFVVS"
     gene            16561..16908
                     /locus_tag="RJ266_000431"
     CDS             16561..16908
                     /locus_tag="RJ266_000431"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HDV7354211.1"
                     /translation="MRVGCDIIAISRIEKIHSRHGKNFLDKFLSPKEQILIKNPATLA
                     GLWAAKEAASKALGVGICELCSFFDIEISKDEKNAPKLKYSQKITKDFNITQTSLSIS
                     HDNGFAIAIVAIV"
     gene            complement(16909..17328)
                     /locus_tag="RJ266_000432"
     CDS             complement(16909..17328)
                     /locus_tag="RJ266_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354212.1"
                     /translation="MKRVRTKIRANFRRRVKRTLKGSLKEKLAGTILLCAIVPLAVLG
                     YLFIVIIGTFFNTARARQGVRALDHFVNASLFNGYAWESVSSHAWRERNRKKWARIVI
                     KITDFFQKDHCKRANKREQPVVDFILSRNLDKQTIGK"
     gene            complement(17325..18686)
                     /locus_tag="RJ266_000433"
     CDS             complement(17325..18686)
                     /locus_tag="RJ266_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HDV7354213.1"
                     /translation="MSECPFFPKPYKNKASTLLTFLLKRRSWLDGLYERSYKMQTGYV
                     KMPNFDLYVINDTKEVKRMMVDEVREFPKSAFLHELLSPLLGESIFTTNGEVWKKQRE
                     LLRPSFEMTRINKVFNLMSEAVADMMDRFSKYPNHAVIEVDEAMTFITADVIFRTIMS
                     SKLDEEKGKKILNAFVTFQEQSVHTAMRRMFRFPKWLSYVLGDCKRAKAGDVIRQVLS
                     DIIKPRYDMADNAEFEDILGSLLLVVDADTNKRFSFEEILDQVAMLFLAGHETTASSL
                     TWTLYLLSLYPKEQEKAYEEITQVLQGGAIEISHLRQFKCLINIFKESLRLYPPVGFF
                     AREAKKDTQVRDKLIKKGSGVVIAPWLIHRHEEFWTNPHGFNPSRFEGEYKKDAYLPF
                     GVGERICIGQGFAMQEAILILANILKTYKLELEEGFVPDVVGRLTVRSANGMRIKFSK
                     REL"
     gene            complement(18683..19804)
                     /locus_tag="RJ266_000434"
     CDS             complement(18683..19804)
                     /locus_tag="RJ266_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF829 domain-containing protein"
                     /protein_id="HDV7354214.1"
                     /translation="MDREVFYIAGYDPKSYRFYYDLFKKNLKDYSYAFNIKADLSKIE
                     KNEQFPFFQISCEGVQTKYHFLTWNDIVKKNWSENYKDALADCYSFFRIYTITGLFIK
                     FGKESIYQLITGYYPFFYVLFSLLFSLVLAFESFAFLQNYMHFSLAIIIGCFLGFLLN
                     HFLFKLGKKLAVFWIARICAFCATWQDKKTGTMQERIKLFANTIVDKLKQNENKQDYE
                     LVLVAHSVGTIVCIEVLECILRQNLDLSLLHKLKILTLGECIPLVSYQKKADEFRKKL
                     EFVSRFDLKWYDYTSIIDGACFPQVDFFRTSGVNAKFTPPFLSAKFHTLYEKHEYKKI
                     KRDKNKAHFLYLYSISVKGDYDFFSFIIMPKFLEEKVKI"
     gene            complement(19877..21061)
                     /gene="kpsS"
                     /locus_tag="RJ266_000435"
     CDS             complement(19877..21061)
                     /gene="kpsS"
                     /locus_tag="RJ266_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide modification protein
                     KpsS"
                     /protein_id="HDV7354215.1"
                     /translation="MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAVKMRKNQTKVFKL
                     NFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKIDAILMYNDCRIIHAKAIKVAKE
                     LGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
                     MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIY
                     NLEKKYFLAILQVYSDTQIKYHYKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRG
                     YKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINSTVGLSAILEGCPTK
                     VCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFL
                     DK"
     gene            complement(21058..23127)
                     /locus_tag="RJ266_000436"
     CDS             complement(21058..23127)
                     /locus_tag="RJ266_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HDV7354216.1"
                     /translation="MKYYSISKKLIANVRNFYTISLYKKNLKIKKDDLFFGWGRKKSG
                     LKAMNLAKKYKAKFILLEDGFIRSLNLGVENSPSFSMVKDDVGIYYDATAPSKLENLL
                     NTYEFKDEEIKQAKKAIELIKKYKISKYNNNLDIPDDYFQKDEKRVLIITQTANDASL
                     EFGLAKDFKTVDMIKDAIKENPKSKIYIKIHPDVLSGKKQSDLDINSLPKECILITEN
                     FNPIALLEFFDKVYTKTSGMGFEALMQECECICYGMPFYAGWGLTKDKLECKRRMQKR
                     SLEEVFYAAYILYAEYFNPYLNQKSNIFDTIQTLAKYKDIEKANSNRLFMLGFILWKR
                     HFIKPFFKAKDNKIIFLNSLKSLARYKLKENDKFFIWGKRIDYNALKTTLIKKAQDEN
                     LLHFTPKISLVEDGFIRSISLGSDLTRPFSLIVDDKGLYIDPNKPSKLEELLQNEIFD
                     ENMLNRAKNIIKILLENRFSKYNGLKHENLKINAKIGQKIILIPAQVEDDASMILGGF
                     GLSTLDLLKEVRSKNQDAYIIFKPHPDVLSGNRAGLKDETLILEFCDEIVKDCSIDSA
                     IKIADEIHTITSTSGFDALLRAKKVFTYGMPFYAGWGLTKDKYRCERRTRKLSLEELV
                     AGALIIYPRYINPKTKTLCEIEVCLDIMLNLQKAYFSKKYIKLAIDFKTFMLRKIRRF
                     YEFLAKK"
     gene            complement(23124..23636)
                     /locus_tag="RJ266_000437"
     CDS             complement(23124..23636)
                     /locus_tag="RJ266_000437"
                     /EC_number="2.7.1.224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine diphosphoramidate kinase"
                     /protein_id="HDV7354217.1"
                     /translation="MKNNPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYLDGDEL
                     REILGHYAYDRQGRIDMALKRAKFAKFLNDQGMMVIVTTISMFNEIYDYNRKQLKNYY
                     EIYIECDMHELIQRDQKGLYTKALNKEIDNVVGVDIEFDKPEADLVINNSCRNNLEEK
                     VELIIKKLAL"
     gene            complement(23626..24387)
                     /locus_tag="RJ266_000438"
     CDS             complement(23626..24387)
                     /locus_tag="RJ266_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP:phosphoglutamine cytidylyltransferase"
                     /protein_id="HDV7354218.1"
                     /translation="MNAIILAAGFGSRLMPLTKDQPKCMVEYKNKKIIDYEIEALKSA
                     GINEIAVVGGYLNDVLKNYLNKYDIEHFFINSKYDKTNMVHTFFCAKDFMLKCIEEKQ
                     DLIISYADIVYFQDCVQKLINAKEELAIVVDKSWCKLWSKRFANPLEDAETLKMTNGY
                     IIELGKKANAYDEIEAQYIGLFKFSYQFLSEVIAFYEMLDRDILYDNKNFENMYMTSF
                     LQALIEKYNNAKAVEIDGNWCEIDFMSDLEVQIEK"
     gene            complement(24389..24991)
                     /locus_tag="RJ266_000439"
     CDS             complement(24389..24991)
                     /locus_tag="RJ266_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HDV7354219.1"
                     /translation="MFIGITQRLICNDSYHEERECLALDWGKLFNKDLFKNFTPLPLS
                     YEIDFSYYKHLIKAVILSGGNDLSFYSPNVLSKKRDLYEKQVIEICLEEKIPLLGICR
                     GAQMIAHYFNSHISPCENHIGKHEVFFSKEKFISNSFHNFAIEKLGEDLVELCLAKDN
                     TIEAFKHKYENIFGIMWHIERENGLNNIQILKEWFSLIKE"
     gene            complement(24982..27321)
                     /locus_tag="RJ266_000440"
     CDS             complement(24982..27321)
                     /locus_tag="RJ266_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354220.1"
                     /translation="MAELNFKTKAQNLKNLQTKLKKAKVLPLVLTSLEELISNEDKVL
                     QDIQTLKANRLIIRSSSLSEDSMKNSNAGAFLSLANIKADSKDELLAALYEVANSMPS
                     KSDEILVQPMLENITLCGVGFSVDKDNFSPYFCLQYDENGSNSSITDGSSTSAKTYYH
                     YRNYLEFKDIRLQKIIELIKELEVLYDCCFLDVEFAFAIQDDKEELFCLQVRPLVMHE
                     KNNLFHSLPKEALYRFYKRFESLKESRSRVLGDKAIFGVMPDWNPAEIIGLRPKRLAF
                     SLYKEIITDNIWAYQRDNYGYRDLRSHPLIHSFLGIPYVDVRLSFNSFIPKKLDENIA
                     QKLINFYLDKLNKNHELHDKIEFNIVYSCYDFNSSKKLEELLNHGFNENEIKRLEFSL
                     LELTNKIINPRSGFYLKDIQKAYKLKERYDGIINSNFSLIDKIYWLIEECKRYGTLPF
                     AGVARAAFVAMQLLNSLVEIDFITKEEKDDFLNSLNTVSKNLSKQTNHLNFHNKDQFL
                     KDFGHLRAGTYNILSPRYDEDFELYFDADQKDSKVYLQDKAFVFSEEKTRALNALLKE
                     HGLEINACEFFDFLKQAIEGRELVKFEFTRLLSKAIVYIEELGKYYDIEKEDLAHLDI
                     KSILNLYSSLYSINPKEQFIEEINRNKKEYELTQAIKLPSLLCNADEIFSFYNHSIIP
                     NFITQKSITAFTAKENDKDLEGKIVLIYAADPGYDYLFTKNIAGLITCYGGANSHMAI
                     RASELGMPAVIGVGEENFEKYLKAKKINIECESEQIFCL"
     gene            complement(27336..28097)
                     /locus_tag="RJ266_000441"
     CDS             complement(27336..28097)
                     /locus_tag="RJ266_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDV7354221.1"
                     /translation="MQKLVEQVWDYTKHAKFYSYRPNYAPKTIDMLISLVGKKDIKVA
                     DIGAGTGNLSIMLLERGCKVVSVEPNDAMREIGIERTKDQKIDWVRATGLNSTLQNSE
                     FDWVTFGSSFNVMDRNEALEEAHRLLKSEGYFSCMWNHRDLNDPVQKIAEDTIVEFVP
                     NYTRGTRREDQRPIIESRKDLFDNIVYIEEDFYFHQSIENYINAWKSVKNPYWDLETD
                     EGNELFNKISDKISQRLPKEFSIKYTTRCWSAKKI"
     gene            complement(28149..28922)
                     /locus_tag="RJ266_000442"
     CDS             complement(28149..28922)
                     /locus_tag="RJ266_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDV7354222.1"
                     /translation="MKQGDFTEVAKHYHNRPAYSPFLLEKLVACINDKNKNFKDLNIV
                     EVGAGTGKLTKMLGEMFGCQISAVEPNDNMREEGQKFTQNLSNISWHKGSGEETCMSN
                     SQADWVIMASSFHWTDPKKSLPEFNRILTGGGYFTAIWNPRHIVEGSVFDEIEKEIKH
                     IVPDLARVSSGTQNVKKWEEILVSTGDFTDCFFMECDYKEFWDKERYLGAWHSVNDIQ
                     AQAGEKRWKEILEMIEAKISHMQSIEIPYKIRAWTARKA"
     gene            complement(28989..>29297)
                     /locus_tag="RJ266_000443"
     CDS             complement(28989..>29297)
                     /locus_tag="RJ266_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2972 domain-containing protein"
                     /protein_id="HDV7354223.1"
                     /translation="IAMSQVEFEKLYQNSYLFDKVKIYIQHLCKSIDKQINLENEKKI
                     KEKDILLFFKEHSFYRKQLKSILDYELQHIKQHRPDIVASWKYYQEFEKMCKELDGNI
                     "
BASE COUNT         9931 a         5067 c         4008 g        10291 t
ORIGIN      
        1 aaactattga caaattatta ttgtagtgat aaaatgcatt ctgtttaatc tatatttaac
       61 aaaggagaat tcatgtcaaa ctatccaaag gccattggtc catactcagc ttatagggaa
      121 gcaaatggac ttttatttat atcaggacaa cttcctatca accctgcttc aggagaaata
      181 gaaagctctg atatcaaaga acaaaccaaa caatctttaa aaaatatcgg tgctatctta
      241 gaagaaaatg gtatcagtta tgataaagtg attaaaacca cttgcttttt agctgatatt
      301 aatgattttg tagcattcaa tgaaatttat gctgaatttt ttaaagctcc ttatccagca
      361 agaagtgctt ttgcagtaaa agatctgcca aaaaaagcta aagtagagat agagatcatc
      421 gctcaaaaag gataaaacat gctaggtatt gttttttctt tatttagtgt ttttttactt
      481 gtttttatgc tttataaaaa aatcaatgct cacatggcat tgcttttaag tgggctttta
      541 ttactctctt tggctactat ttttggactt tcaccgcata ttgtggttaa gggttcttta
      601 aattttggtt tttttgatat ctttcaagtc tttaaccaaa ccatgtcaag tacattagcg
      661 ggacttggct taactttaat gtgtatagcg ggtttttctg cttatatgga ccatgttggg
      721 gcttcttatg cgctttttaa ggtttttgaa aagcctttaa aagccgtaaa atctccttat
      781 gttttactca tagttgccta ttttatcgtg caatttttgg ttctttttat cccatctcac
      841 gctggtttgg cacttttgct tatggttact atgtatccta tactcgttcg ctcgggcgtt
      901 tcaaaacttt ctgccttaag tgtgattgcg atttgtcaat atatcgatca tggacctgga
      961 agtggaaatg tgatcatggc gtcaaaagta gctgaagttg atcctgcaat ttattttgtt
     1021 cattatcaac tccctacaac cttgcctatc attatagctg taggtattgc gatatatctt
     1081 tgcaataaat tttttgacaa aaaagataat tttgtcttca atgcacaaga aattgaaaaa
     1141 gaactaaatg aaaatgaagg caaagaaaaa gaacttaaaa agcctcctag aatttatgcg
     1201 attttaccta taattccttt ggttttaatc ctaggattta gttccgtgct tgatagcatc
     1261 ttggttttaa tgggaataag tagtgctgaa gaagttaaag cagctgctag tactgccatt
     1321 aaaatgaatg ttccagtagc aatggtgatt tcaacttttg tggctattat ttttgaaatg
     1381 atacgctata aaagtatagt agaaactctt aattctatta tgattttctt taaaggaatg
     1441 ggacatttat ttgttatcac agtttcactc atcgtttgtg gtcaagtatt tgcaagcggt
     1501 cttttatctg taggttttgt agatacttta atagaatttt gcaaaaatgc aggatttgga
     1561 gttttggcta ttattatcgc cgtttcaatc ttgcttgcag tttgtgcttt cttaatgggt
     1621 tcaggaaatg cggcattttt tagctttgct ccacttatcc caaatatagc aaaacacttt
     1681 ggagttgaaa ctatcaccat gatagcacca attcaaatta tgacaggctt tggaagatgt
     1741 gttagtccta ttgcaccagc gattttagct atctcagcta ttgcaaaagt aagtcctttt
     1801 gccgtggtta aaagaacagc tattcctatg cttgtagcgg ctattgtaaa tgttattatg
     1861 acttatatct atctttaaaa aggagaaaaa atgaactcaa aaactaaact tattcattgt
     1921 ggcagaggcg atcaaggcgc tgaagtaaga tcagtcaatc ctacacttat gcgtgcatca
     1981 accatacttt ttaaagatca cgcaacttgg caaaaataca gagaattaag aaaaacagat
     2041 cgtgttttaa gctatggggc tagaggaaca acaaccaatt ttgaacttga aaaacttatt
     2101 tgcactctag agggtggtta tagagcacaa cttttcccaa caggacttgc agcattagct
     2161 atggtgcttt taaactatgc aagcaaagat gcgcattttt taatcaccga tgcaatttat
     2221 ggtcctgtaa gaacgatttg cgaattattt ttagaaaaaa tgggtgttga aattgatttt
     2281 ttaaaagctg atgcaagtga tgtagaagaa aaaatcaaac ctaataccaa gcttatctta
     2341 tgcgaaagtc caggttctat actttatgaa atcatagatt taccaaaact ttgcaaaatt
     2401 gcccatgcgc ataatatccc tgtagctatt gacaatactt attctagtgg atattttcta
     2461 aatcctttag aacttggagt ggatatttca gttatcgccg ctacaaaata tcttagcgga
     2521 cactctgatg taaccatggg tatagtagta atcaacgaaa aagaatggaa aaattttgac
     2581 aaacttccag aagctttagg ctttacaaca agtcctgatg atgcttactt agtacttcgt
     2641 ggtatgagaa cactagatgt aagaatgaaa gctcatgaaa aaagtgctga tgaaattgta
     2701 gagtttttac aaagcagaaa agaaattaaa acaattttct atccaaaact caaatcccac
     2761 ccaaatcatg aaattttcat gcgtgatcat aaaggtgcaa atggtatgat taccatagaa
     2821 tttgcagaag gttatagcaa agatgatgct attaaatttg tagataaact agaatacttt
     2881 tcaattggtg ctagctgggg tggatatgaa agcttagcca ccgtaactac tccacctaga
     2941 actgcaacag attggagtgc aagaggacca tttgtaagat ttcatatagg tcttgaagat
     3001 actaaagatt taattgctga tttaacacaa gcttttgata gtattaaaaa ataaggagat
     3061 aagatgacag gaattagcgt atttgatcat agattactag cagactcatg gagcacgcag
     3121 gaaatgcgtg ctattttttg cgaacaaaac cgcatacaaa aatggctcga tgttgaagca
     3181 gctttagcaa aagcacaagc aaaacttaaa attatcccta aaaaagcagc tgatgagatc
     3241 gcaaaaaaag ctcattataa atttatggat atggacttta tctttgctga atttaaaaag
     3301 accaaacacc ctttagttcc tactgtaaga ggattagaaa aagcttgcga taataattta
     3361 ggcgaatatg tacattttgg agtaaccact caggatatca tcgatacagg actggtttta
     3421 caatttaaag aagcaatgac tcttataaaa agcgaattaa aagctatcgc aaaagcccta
     3481 gcaaaactag ctaaaaccca taaaaatact gctatgatgg gaagaacttt agcacttcaa
     3541 gctttgccta ttacttttgg acataaagtg gctatttggt taagcgaact tgagcgtcat
     3601 tttgaaagaa tacttgaact tgaaaaaaga ctttatgtag gtagtatagt aggcgctgta
     3661 ggaactaaag caagtttaag tgatgagtgc aatgaagtag aaaaactcac tttagaaaat
     3721 ttaggacttg atgtgcctaa tatttcttgg caacctgcac gtgatcgctt tatagaactt
     3781 ggttttgtac taggtaatat caacacaacc tttaacaaaa tcgctcatga aattttaatc
     3841 ctttcgcata atgaaattga tgaagttgct gaaccttttg gcaaaggaca agtaggatca
     3901 agcactatgc cacacaaaag aaatcctgca gtaagtgaaa atgcagttac agtaagcaat
     3961 gcttttaaag caaatttagc cattttaagt gatattgaaa gacatgaaca tgaaagagat
     4021 ggtcaagttt ggaaaatgga atggaagctt ttacctgaaa tgtttttaat gctttctgtg
     4081 gttttagcaa atatgaaatt cgctcttagc gatttagaag taaaaaaaga taaaatgctt
     4141 aaaaatttaa atactcttaa tggttttgtt ttagcagagc gtgttatgtt tgcattaagc
     4201 gatcattatg gaaaacaaca tgcccatgag attgtttatg aaaatgctat gctaggtata
     4261 gaaaaacaaa aaacttttaa agaagtttta cttgcagata aaagagtatc taaggtattg
     4321 aaagaaaaag aaatcgatgc tttacttgat gcaacaagtt atgtaggata tgcaccaaaa
     4381 cttgtagatg aatttttggc aaaaatcaaa aatagcgcta tcttaaaata ggaaaaatca
     4441 tgttctatag tgaaatttta gcggatttta ttttcaatct taaatatgaa aatatcccta
     4501 atgcagttgt tcaaagggct aaagagctta tgcttgatag ccttggaaca gctatagcag
     4561 caagcaaaga agaatgtgtt ttaaatgctt ttaaagcttt tgaaaattta agcacagaaa
     4621 aaaatactcc tatttggata aatgatcaaa aattagatcc tatatacgca gccatgctag
     4681 atggcattgc ttctcatgcg ttagattttg acgatacgca tacagaagcg attttgcatg
     4741 caagtgcgat tttaactcca ctttgtttaa gttatggttt tcatgttagc aaagatgcga
     4801 aaaaaatcat caaagctttt ataataggct gggaaattgc agctagagta ggcattgcaa
     4861 gcaaaggtac ttttcataag cgtggttttc atactactgc tattgcagga atttttggaa
     4921 gcgtgagtgc aagtgcaatc ttactagatc ttaacaaaga acaaatcatc aatgctttag
     4981 gacttgcagg aagttttgca agtggggtta atgagttttt atccaatgga tctaattcaa
     5041 aagttttaca tattgccaat gctattaaaa acggcattat ggtagctcat tttgctaaaa
     5101 acaatatgag tggacctttg agtatttttg aaggtaggga taatatcttt aaatgttttg
     5161 gcatagaaga agaatgcgat aaaacagaac ttaacaaagc cttaggagaa atttggcaaa
     5221 ctatgcaagt ttcaatcaag ccttatccaa gttgtcattt tgctcatggg cttattgatt
     5281 gtgctattgc tttaaaaaat gatggtttaa aagctgatga aattaaaagt attcattgtt
     5341 ttgtagatga agttcctatt tcttttatct gtgatccttt ggaagcaaaa tacactccaa
     5401 acagtgctta tgaggccaaa ttttccatgc cttttttaat ggctctagga ttctttgatg
     5461 gtaaaatcac tcttgaatct tatgaaaatt taaagcgtga agaagtacta gaatttgcta
     5521 aaaaaatcag ttacaaaaaa aggaaatctc aaggctttcc aaaatatttt ccagggcatt
     5581 tagaagccag tttgcaagat ggacgcataa tccaaaaaga tgtttttatc aataaaggta
     5641 attttgataa tccactaagt tttgaagaat taaaagctaa atttttagcc aatgcacaaa
     5701 tttaccttga taatgctaaa gctaacaaaa ttctagatca aatcatcaat ctagaaaatt
     5761 taaaccactt ttctttttaa atatttatcc ttctttttat aagaaggata atttcattac
     5821 acttttttat tataatattt attattaatt taggaattac aatgacttta aacgagttaa
     5881 aagatggaca aaaggctatt attgtcaatt taaacgctca caaagaactc aaaaatagac
     5941 ttttaagctt tggatttatt aaaaataaaa acttgaaaaa aattcactcc tctttaaaaa
     6001 atgccatcat aatggtagaa cttgatacaa gttgtgttat cctaagatct gatgaagcta
     6061 aaaccataga agtgaatctt atatgaaaaa aatcaaaata gcccttgtag gtcagcctaa
     6121 tgtaggcaaa agtcttctta ttaatgcgct ttgcaaagcc aatatgaaag taggaaattt
     6181 tagcggagtt actatagaaa aagcaagtgc aaaaactttt tacaaaaact atgaatttga
     6241 agtcattgat ttgccaggaa cttattcttt agatggatat agcgaagaag aaaaaatcac
     6301 acgtcatttt ttaaatcaaa atgactatga tgttattgtt aatgttttag atgctactaa
     6361 tttagaacgc aatcttatcc ttagtgcaga acttttaagc cttaataaaa aaatgctttt
     6421 agctttaaat atgtgtgatg aagccaaaaa agaaggtata gagcttgaca cttctatttt
     6481 aagccaagaa tttcaaagtc aagttgttga aatttcagca aaaacaaaag aaaatttaga
     6541 acttttgctg caaaaaatta ttattttatt tgaaagtaaa tttattccaa gatcccaatt
     6601 ttacactccg ctttgcgaaa aaagtccaga aaaagaagat ttattatatt ttattaatga
     6661 actttcaaaa aaaattatca cacataaaaa agaagagaga aatttaacca aaaaaatcga
     6721 tgccttgctt atccataaat tctttggctt acctatattt ttatttttaa tgtggctttt
     6781 atttcaactc acctttagct taggacaaat tcctatggat tatatagaat caggctttaa
     6841 tgccttaggt gaatttgtta aaaacaatat ttctaatacc ttcatcgctt cagctttggc
     6901 tgatgggatt atcgcaggtg ttggtgctgt gatacttttt ttgcctaata taatgatttt
     6961 atttttaggc atagctcttt tagaaaccac aggctatatg tcaagagtag cttttttact
     7021 tgatgggatt ttacataaat ttggtttaca tggcaaaagt tttattccac taatcactgg
     7081 ttttggttgt tcagtacctg cttttatggc tacacgcact cttaagaaca aaagagatag
     7141 acttttaact ctttttgtga tcaattttat gagttgcggg gcaagacttc ctgtatatgt
     7201 gctttttatc ggcgcttttt ttccaagtga aaaagcagga aattatcttt ttggaattta
     7261 tattttaggt gcgattttag gactttgtgc tgcaaaattt ttaagaatga cagcatttcg
     7321 tggacttgat gaaccttttg ttatggaaat gccaaaatat cgtatgccaa attggtattt
     7381 agtttggttt atggtttata ataaagccaa aatgtatctt aaaaaagcag gaactttcat
     7441 acttttggcc tctttgctta tatggtttgc tagtaatttt ccaaaaagtg aagaaaattt
     7501 aaatgatttt aatgctcaag aaagagctat agaacaaagt tatttaggac aatttggcaa
     7561 aagtatagaa cctatttttc aaccccttga gttagattgg aaattaagca tatctttaat
     7621 cagtggtttg gctgctaaag aagtgatgat ttcaactatg ggagtgcttt attcactagg
     7681 aaaagatgta gatgaaacaa ataatgattt aaaaggaatt atcgctaaaa atatacctat
     7741 accaagtgca gtggctttta ttttatttgt aatgatttat aatccttgct ttgcagcaac
     7801 tatagttttt tcaaaagaaa gtggaaagct aaaatatact ctctttctct ttctttttac
     7861 ctgcacaagt gcttatatag tagcttttat aggacttcat attgctaaaa ttttattaaa
     7921 ctaacttgct tttaatgatg aaattttagt aatattatct tcaaaagctt ttaaaatgct
     7981 ataagcaata ccttcaaaat caagcccacc gcaaagatag attaaagtca tacgaaaaga
     8041 tttactcaca tcaagctttg gtttttcagc gttcatattt aacttaaaat cataaggact
     8101 tgcatgttta aaagcataat tttttgccgc aattaaaaaa tcattcttat cttttaaaaa
     8161 ctctccttta actaaaataa agcttatttc aagatatttc caaaaatctt ttgaaagcat
     8221 aggattttca tcaaaatttt gctctataaa agtatagttt ttttcaaagg attttttata
     8281 attttctaca agcaaagcac ctaatttatt tttagctata ttttgtaaaa taagttttat
     8341 attgctttca aattcaaaat ctatttgttc taaaatttta atttgctctt ctagaaaaaa
     8401 ttcttgtttt aactcttcat tacaaagttt agcgtaagaa aaaatatttg ccataggctt
     8461 ttcataattc ccaaactcat cccaaaaatt tttctcacta caggctatac aaccatgtcc
     8521 tgcggccact ggccaagaag ttttagcatt gaatttcact ttaggacagt tattgtaagt
     8581 ataaggtcct ttacaaccta ccttaaataa acaagctcca ttctttgcag cctcatcgtc
     8641 aaaatgttca gcaaaaatcc cactttcaaa ttttgccttt ctttcacaca tatcatgcaa
     8701 acatttacca taagcccaca caggacgatt ttgctcatca agttcaggca aaactccaaa
     8761 taaagcaaaa aaacttaaag tcacaatgat atttacatca cttggaggac aacctgggat
     8821 atttactact ttttgactta agacttcact aataccacag gttttactag gatttggata
     8881 agcagcctga ataccaccat aacttgaaca agtacccact gcaaagatag ccttggcttt
     8941 agcagctagt ttttctaaaa tttcatagcc actctctcct tgtgctccta tagtaagaaa
     9001 aaaggtatca atggctgcaa caccaccttc aaccgctaaa ataaaatctt cttctaaaac
     9061 atgctctaaa agttcttcag ccttagtgcc atttgccgcc attaaagttt catgatattc
     9121 taaagaaaaa aaatcaaaaa taagctcatc aaaacttggc aactcagaac gcaacaaact
     9181 ctcgctacac cctgtacatt cacaaagatg aagccatact aactttgttt taggtgcgat
     9241 ttgaaaaaat ctttgagcaa gagctggaat ttcattgcct aaagataaat gcctagcaag
     9301 aatttttaca ctttcttcat tgataacctt atcctctttt aaagtagaat tttcaagttt
     9361 tttaatgcga tcttcaagta tattttttaa ttcttcattg ctaagctttg tcatttttta
     9421 tcctttttga ttatcccaac aaagaacagt ttgcccttct tcattttttt caacatcacc
     9481 catacccatg atgttatatc ctgcatcgac ataatgtatt tcacctgtaa caccatttgc
     9541 caaatcgcta agtaagtaca tggccgaatt tcctacatct tctatactaa cattgcgttt
     9601 taaaggagaa ttgatttcat tgtattttaa aatcattcta aaatccccta ttccacttgc
     9661 tgctaaagtt ttaataggac ctgctgaaat agcattaaca cgaattcctt ttacccctaa
     9721 atctcttgcc aaataacgca cagaactttc aagtgcagct tttgctacac ccataacatt
     9781 ataatgaggt acatatttaa ccccaccaag ataacttaaa gtcaaaatcg aacccttatc
     9841 ttttaaaata ggtaaaactg cacgtgttaa agaaagtaaa gaatacacag aagtttgcat
     9901 agctatatca aaagcttctt ttgaagtttc taaaaaagaa ttttctaaag cttcttttgg
     9961 agcaaaagca accgcatgca ctacaaaatc aatctcacct aaatcttttt tgattttttc
    10021 agcgatagaa tctaaatgct cattattgtt tacatcaagc tcataaacaa aattagaatt
    10081 aaactcttgt gctataggtt ctacgcgttt ttttaaagca tcatttaaaa aagtaaaagc
    10141 aagctgggct ccttgatcaa aacatgcttt tgctatgcca taagcgatag atttattatt
    10201 tgcaacccct acaataaggc cttttttacc cttcataatc atcttttatc ctttgattaa
    10261 ttttataaaa ttttctactt ttaaagctgc agagcctatc aaaactccgc cacaatgatt
    10321 tacacttaaa atttctttga tattattttc attcacactt ccaccataaa gcaaaggtac
    10381 cttggttaaa ctcgctaaaa attcaagcac tttagcgata tctgtacttt gtgcgctcac
    10441 tcccgttcct atagaataaa taggctcata agcgataatg agtctttcat aatttaaatc
    10501 aatcatttca agttgttttt ttaaaaactc taaagtcttg cctgaatttt ttgtatctaa
    10561 attttcacct atacaaaaaa caattttata gccatgctct ttagcaaaat caaatttagc
    10621 tccaataagc tcttcatctc ctaaagctct tctttcagag tgcccgatta aaacacattt
    10681 gatcccaaat tcgtccaaat gctcttttcc aagctcgcct gtaaaagcac cattaacaca
    10741 aggataaaaa ttttgcgctc cttgtatgaa gttattttca ttttctaaaa atgctatact
    10801 aggtgggaaa acgataatat catcgcattt tacccctata gttttattta aaatttcagc
    10861 ataaatttta aaacttgctc ttgtgtgatt gcattttaaa tttgcagcaa agatcattca
    10921 ttttccttag atcttaaagc ttttacacct ggaagttctt taccctctat aagttcaaga
    10981 gaagcgccac ctccagtaga aataaaagtc atctcatctg catcacctgc gcgcgcaacc
    11041 acatcagctg tatcaccgcc tccaacaaca gaagttgcat gcccttcact aatataatga
    11101 ctcattttaa tgctaccttt tgaaaattta tcaatttcaa aaacccccat aggtccattc
    11161 caccaaatcg tttgcgcatc agaaatcacc tctttaaaaa gtctcacact tgcaggtcct
    11221 atatctaaac ccatccaacc atttggaatt tcttgtgctg gaacaaattt catcggcaca
    11281 tcttgtgagc acgcaggagc ggctacaacg tctactggaa gataaatttt cactcctaaa
    11341 tttttacctt tagtaagaat tttattagct tcttctaaaa gttcttcttc taaaagtgaa
    11401 tttcctatat cataacctaa ggcttttaaa aaagtaaatg ccatacctcc gcctatgatt
    11461 aatttatcta cctttggtaa taaatttgtc aatgcttgaa gttttccact tacctttgaa
    11521 cctccaacaa cagcgacaaa aggacgtgct ggatgtttga taagattgct tgcaaaatca
    11581 atttcttttt gaagtaaaaa tcctgcacct ttgtgttttt catcaaaaaa tttagtaata
    11641 gcctccacgc tagaatgtgc tctatggcat actccaaaag catcattgat ataaacttga
    11701 accatagaag caagttcttt ggctaaattt tcatcatttt tagtttcgcc tttttcaaaa
    11761 cgcaaatttt caagaagtaa aatttcaccc acttttaaat tcatagcttt ggtttttgca
    11821 tcttcgccga taacatcttt tgccataaca atttctttat ctaaaagtct agcaagacgc
    11881 ttagcaacag gttctaaaga atacttggag ctaatttctt ttggacgccc taaatgagag
    11941 gctaaaatca cactacatcc attatccaaa caatatctta tcgtaggaat agctgatctt
    12001 atgcgtctat catcagtgat atttaaaaaa tcatcttgag gaacattaaa atcacatctt
    12061 ataaaaactt ttttcttagc taaatcaatg tcttttatag aaataatatc actcatgatt
    12121 aagccttatt tgcaatatat actgccatat ctactagacg acttgaataa ccccattcat
    12181 tatcatacca agcaatcacc ttgataaaat catccgcaat cacttgagtt aaatcacttg
    12241 ctacaatagc tccataagaa caagtgataa aatcgcttga aactctttca tcatcatcca
    12301 ccattaaaat gccttttaaa tttgtagctg cagcttttct aaaagcttca ttgatttcat
    12361 ctttgctgac tttacggctt agctgcgcag ttaaatccac gcttgataca tcaatcactg
    12421 gcacacgcat actttgtccg tgaagcttgc cattaagttc aggcataaca agcttcatag
    12481 cttttgctgc gcctgtagaa gttggaatga tattttgcgc tgcagcacga gaacggcgtt
    12541 tatctttggc cttagcatca ataatacttt gtccatttgt ataagcatgt attgttgtca
    12601 taagtccttt ttctatacca aaattatctt gtaaaacacg acaaacagga cctaaacaat
    12661 ttgttgtaca acttgcatta gaaataatgc tttcaccctt gtaaagttct gaatttactc
    12721 ctaaaacata agtaggtgta tcatcttttg caggagcact catgatcact ttttgcactc
    12781 ccatatctat aaattcttga cattttgcca tagttaaatg cgctcctgta cactctaaaa
    12841 caatttgtgc gccgtgtttt gcaaagtcaa gatcttttac attgcgactt ttaaatactt
    12901 tgattttttt accatttacc actaaatcat cgccttcact atcaacactg cctttaaatt
    12961 caccatgtac tgtatcgtat ttaaaaaggt attttgtaag ttcaatatcc gtagtatcat
    13021 ttatcgccac aagctcaata tcatttcttt ctaagatgat tcttgcaaca catctgccta
    13081 tgcgtccaaa accatttata gcaactttta cagccattta atttcctttt gcaaaatata
    13141 atgttaatat tctacaaaaa aaaggttaaa attttaatga agatagcact ttttggtggc
    13201 agttttgatc caccacataa tggacataat agcgttgttt tagaggcttt ggaaaaatta
    13261 gatattgata aacttattat tatgcctact tatatcaatc cttttaaaaa aagttttagt
    13321 gctgatgaaa agcaaagatt tttatgggtt aaaaaacttt ggggacattt accaaaagtt
    13381 gaaatttgcg attttgaaat caggcaaaaa cgccctgttc ctagcataga aagtgttaag
    13441 tatctttata agctttataa tcctagtaaa ttttatcttt taattggcgc agatcattta
    13501 gaaaaacttc atctttggca tgattttgaa aaactcaatt ctttagtaga atttgttatt
    13561 gccaatcgca atgatatagg aattcctaag aatttcaaag atttaaaaac caataaaaaa
    13621 atcgcttctt ctttcatacg cgacacttta aatacaaatg aggtttgtga agaaattaaa
    13681 gatgaagtaa aaaaatatta tgaaaaatta caaaaaaatt gatacaattt caaaaattaa
    13741 aggacaataa tgcaagaaag aatagattta atcgttaaaa ttttagatga aaaaaaagct
    13801 gaaaatatca aaaccattga catgagcgag caagaatact ttgtaaaata tgtcattatt
    13861 gcagctactt taggagaaag acacgctcta tccttgatcg atgagcttaa aacacaactt
    13921 aaagccaaag gtgaggaatt tttaaacata gatagtagcg aagaatggag cgtgattgat
    13981 cttggcgata ttttaatcca tcttttaaca ccagaacaca gaggaattta taatatagaa
    14041 gaattactag aaaaccttaa aaaaggcagg gtttaaaaag gctaaaattt aattagcctt
    14101 tttaattttt agagattatc gatatattct tcaatctctt ttttaatttt ctctttttgc
    14161 tcttttaaag cttttttctt agccttatac tcaaccttgc tcatataatc tttttgttct
    14221 ttcaaggcat caagttcttt ttcgattttt tccacttctt gttctttaag ttttttagct
    14281 tctagttttt tatcataaaa cataggatct ttagtacaat cattttgcac ttgctttaaa
    14341 gcaagttcta aacttaaagt tctagctgtg tcattatgtg ctttagaaaa actgatttct
    14401 ttattgatac gatcgatttt tctatcacat tcacttgcac caaaagcaaa agcacatagt
    14461 gtaagtagaa taagtatttt tttcattttt aattcctttt taaaataaat taaatcgcgg
    14521 aatattatct catcaattct taaatctagc ttttatatca ttaaacaaag taaataccat
    14581 actttcaagc tcttttgctc tttctaaaga tgttgcctca aagcgtgtga taagataagg
    14641 gctggtatta gatgcacgaa gtaaagccca tccatcgcca aaatctatcc tagctccatc
    14701 aatttcacaa agacttttaa caccttttaa agctcctttt tcaatctctt tttgaaattc
    14761 ttccacaagt ttgaattttt cttcttcatt tacaggaatt ttaatttcag gtgtagtata
    14821 aagttttggt aaagctttaa tcatactttc tagatcaaaa cctttataaa caagctccaa
    14881 ggctcttaaa aatgcataaa ttccatcatc ataaccaaaa tatctatgtt taaagaaaat
    14941 atgcccactc acttcagcag ctaaatcaat atctttttct ttcatcattt ttttgatatt
    15001 agaatgtcct gtttttccca taaaaatagt tccaaattta gccacttcat caaaaagatt
    15061 tttagaacat tttacctcgc ctaaaatgcg tggattaggg atatttttag caaacaaata
    15121 acaaagctca tctccacaaa atacatgagt tttacttaaa gcaaccattc tatcagcatc
    15181 cccatcaaaa gcaaaagcca aagaataatc ttgattttga tttaaaaatt ctctaatcgc
    15241 acttaaattt tcttcttctg taggatctgg ggcatggttt ggaaactgtc catcaggctc
    15301 tgcaaacatt acatgagctt ttaaatttaa agctttaatt aaaggctcta tcactactcc
    15361 agccgcacca tttgtgcaat caacaccaaa tttataatta aaatccttta aaaaactaaa
    15421 ttgctcgcac ataaatttca cataaaggct taaaatatcg tatttttcta cttctaaatt
    15481 ttcttcaata tcatcatcta aatgcttata aacttctttt gaaaactctt ttaattctac
    15541 accaaaaaaa ctttctttat tgatagtgat tttaaaacca ttataatctt ttgggttatg
    15601 agagcctgtt atcataacat ttgcatcaaa tttcaagccc tcataaagac taaaataccc
    15661 caatggagtt ggcacaagtc ctatatcata gatttttatt cccgctttgt taagtccact
    15721 cactagataa ttaaaaagtt catttgcact atatcttgca tcataaccca cacttacatt
    15781 tttacagcct ttatttagca tggtttgtcc taagcaaaaa cctatagcct taacactttt
    15841 ttcattcagt tctttgccat aaagtcctct tatatcatat tctctaaaaa tcacatctaa
    15901 cattattttc cttcaaattc atctcttctt taacctaaat ttatcgtttt tctaaagcaa
    15961 atttggatag aaaagaaatt tttgctacaa ttttacatta atttcactaa atgaaggaaa
    16021 atttatggat gaagaattag aaaacgaaga aacgaaaaag aaaaaaggtg gttcacttgt
    16081 aattattatt gttattttac tttttgtttt acttcttagt attatgggag tgattgcttg
    16141 gcttatttca agcagttcaa gtgatgaaag tgaagtcaaa gaagctccaa aagaagaggc
    16201 aaaagccgat aaacctaaag tttcagctcc tactcagcga ggtagtgatt ttgctaatat
    16261 aggtcctatg tatccacttg atccttttac cctaaattta cttagcgata gtggttcaag
    16321 atatgtaaaa tgcactatag aactagaaca aaatagcgag cttttaaaac ctgaacttga
    16381 caaaaaagtt ccagtgatcc gtgatattat tattcgtaca ttaacagcta aaacttttga
    16441 agaagtaagt acacaaaaag gcaaagaacg tttaaaagat gagctagttg gaaaaatcaa
    16501 tgaaatttta accgatggct ttattaaaaa tgtttatttt acggattttg tagtttctta
    16561 atgcgtgtag gctgtgatat catcgccatt tctaggatag aaaaaattca ttctagacat
    16621 ggcaaaaatt ttttggataa atttctaagc ccaaaagaac aaatactcat taaaaatcca
    16681 gcaactctgg caggtctttg ggctgctaaa gaagcggcta gcaaggcttt aggtgttgga
    16741 atttgtgaat tatgcagttt ttttgatatt gaaatatcaa aagatgaaaa aaacgcgcct
    16801 aaattaaaat attctcaaaa aattacaaaa gattttaata tcactcaaac ttccctaagt
    16861 atttctcatg ataatggttt tgctatagcc atagtggcta tagtttgatt attttcctat
    16921 agtttgcttg tctaaatttc ttgaaagtat gaaatccacc acaggttgtt ctcttttatt
    16981 tgctctttta caatgatctt tttgaaaaaa atctgtgatt tttataacaa tccttgccca
    17041 ttttttgcga tttctttcac gccacgcatg agaagaaacg ctctcccaag catagccatt
    17101 aaacaagctt gcatttacaa aatgatctaa ggctctaaca ccctgtcttg ctcgtgcggt
    17161 attaaaaaaa gttcctataa tcacgataaa aagatatcct aaaactgcta aaggtactat
    17221 tgcacaaagc aggatagtcc ctgctaattt ttcttttaag cttcctttta aggtgcgttt
    17281 tacacgacga cgaaaattgg cacgaatttt agttctaact cttttcatag ctctcttttg
    17341 ctaaatttta tcctcatacc attagccgaa cgcactgtta aacgccctac tacatcaggt
    17401 acaaaacctt cttcaagttc tagtttgtaa gtttttaaaa tattagccaa aatcaaaatc
    17461 gcttcttgca tagcaaaacc ttgtcctata caaattctct cccctacccc aaaaggcaaa
    17521 taagcatctt ttttgtattc tccttcaaaa cgagaaggat taaatccatg cggatttgtc
    17581 caaaattctt catgtctgtg tatcaaccaa ggagcaatca ccaccccaga acctttttta
    17641 ataagcttat ctctaacttg ggtatctttt tttgcctctc ttgcaaaaaa tccaacagga
    17701 ggataaagcc ttaaagattc tttaaaaata tttattaagc atttaaactg tcttagatgc
    17761 gaaatttcaa tggctccacc ctgtaaaacc tgagtaatct cctcataagc tttttcttgc
    17821 tccttaggat aaagactgag taaataaagc gtccatgtca aagaacttgc tgtggtttca
    17881 tgtcctgcta aaaaaagcat agccacttga tctaaaattt cctcaaaaga aaaacgctta
    17941 tttgtatcag catccactac taaaagcaaa gatcctaaaa tatcttcaaa ttctgcatta
    18001 tctgccatat catatcttgg ttttatgata tcacttaaaa cctgtctgat cacatctccg
    18061 gccttagcac gcttacaatc tcctaacaca taagaaagcc attttggaaa acgaaacata
    18121 cgacgcatgg ctgtatgcac gctttgctct tgaaaagtca caaatgcgtt taagattttt
    18181 ttaccttttt cctcatcgag ttttgaagac ataatggtgc gaaaaatcac atcagcggta
    18241 ataaaagtca tagcttcatc tacttcgata acagcatgat ttggatactt gctaaaacga
    18301 tccatcatat ctgccacagc ttcactcata agattaaaca ctttattgat acgagtcatt
    18361 tcaaaacttg gacgcaaaag ctctctttgt tttttccaaa cttcaccatt tgtagtaaaa
    18421 atactctccc ctaaaagcgg acttaaaagc tcatgtaaaa atgcactttt aggaaattct
    18481 ctaacctcat caaccatcat tcttttaact tctttagtgt catttatgac ataaagatca
    18541 aaatttggca tcttcacata gcctgtttgc attttataac tacgctcata aagcccgtca
    18601 agccaagatc tacgctttaa caaaaaagtt aaaagcgtag aagctttatt tttataaggt
    18661 tttggaaaaa aggggcattc actcatattt ttaccttttc ttctaaaaat ttaggcatta
    18721 tgatgaaaga aaaaaaatca taatcacctt taacactaat actataaaga tataaaaagt
    18781 gcgctttgtt tttatctctt tttatttttt tatactcatg tttttcatat aaagtgtgaa
    18841 atttagcact taaaaatggg ggtgtaaatt tagcatttac gccactcgtg cggaaaaaat
    18901 ccacttgagg aaaacatgct ccatcaataa tcgatgtata atcataccat tttaaatcaa
    18961 accttgaaac aaattcaagc ttctttctaa attcatccgc ttttttttga taactcacta
    19021 aaggaatgca ttctcctaga gtaagaattt ttaacttatg aagtaaagat aaatctaaat
    19081 tttgtcttaa aatacactcc aaaacttcta tacaaactat agttccaaca ctatgtgcta
    19141 ctaaaacaag ttcataatct tgtttatttt cattttgttt tagcttatct actatggtat
    19201 tcgcaaaaag cttgattctt tcttgcatag tgcctgtttt tttatcttgc caagtagcac
    19261 aaaaagcaca aattcttgct atccaaaata cagctaattt cttacctaat ttaaataaaa
    19321 aatgatttag taaaaatcct aaaaaacatc ctatgatgat agctaaagaa aaatgcatat
    19381 aattttgcaa aaaagcaaaa ctttcaaaag ccaaaaccaa agaaaatagt aaagaaaata
    19441 acacataaaa aaaaggataa taacctgtga taagttgata aatcgactct ttaccaaatt
    19501 taataaaaag ccctgtgata gtataaattc taaaaaaact ataacaatct gccaaagcat
    19561 ctttataatt ttctgaccaa tttttcttaa caatatcatt ccatgttaaa aaatgatatt
    19621 tagtttgcac tccttcgcaa gaaatttgaa aaaaaggaaa ttgttcattt ttttcaattt
    19681 tacttaaatc agctttaatg ttaaaagcat aagaataatc ttttaggttt tttttaaata
    19741 aatcataata aaatctataa cttttaggat catatcctgc tatataaaat acttccctat
    19801 ccatacaata atttcttttt gcttttaatt ataacaactt tgctttaaaa gctctcttaa
    19861 tcaaagcttt ttagtcttat ttgtctaaaa agaaattttt ataaaaattg ccgttgaatt
    19921 gattagtttg taaaagatat tttttaaaat tacataccaa aacaggattg ggtttataag
    19981 catgagcttc acgccaaaaa aattgaagtt tttttggata agataagcct tcaaaatcat
    20041 aaaaagcatt gccacaaacc ttagtcggac agccttctaa aatagcacta aggcctactg
    20101 ttgaatttat agtaatacaa cccaaagcct ttcttaaaag aactggcaag tgggtatcat
    20161 gaacatataa aacccttcct tctacatgat atttttgact taaatcattt atgagtttag
    20221 aataattctt atagccccta tccatgggat ggtgtttaaa aactagataa gatttagctc
    20281 ttgcatggtt tgcaaaagaa agtatggttt cctctataaa gtgctctata ctttttttgt
    20341 aatgatattt aatttgcgta tcgctataaa cttgtaaaat cgccaaaaag tacttttttt
    20401 ctaaattata aatcttttca tttagttttt tttctgtaat cttataaaga tactttctat
    20461 acaatgatct aaaccaaaat aaaaattcaa aaggatataa agtgcgatga tgaagtttgt
    20521 tgttaaaaaa tggagccaaa ataaaagcaa acaaccaata caaaaaagca tcaaaagcca
    20581 taaatttaaa tccacctgga atttctttta tgctttcttt ggtaaaaata ttttgagaaa
    20641 gataaaaatt tttatcacgc ggtaaagaag aatttgcatt caccccgtct ttttccaaag
    20701 taatacaata aggccttaaa tatccttctt caaaaatcca tatttcaatt cctaattctt
    20761 tagccacttt aatagcctta gcatgtataa tgcgacaatc attatacatt aaaatagcat
    20821 cgattttttt attttgaaaa aaatctctat agaaattttc aagatctttt tcatcacact
    20881 tacacctcgt tccgctagga tagaaaaaaa aatctccgcc gttaaaattg agtttaaaaa
    20941 ctttggtttg gttttttctc attttcactg caagatgatg aaaaaaattt cccacaggcc
    21001 cttgcaagag taaaacattt ttaccgctaa attctttttt aattttagtg ctaaatctca
    21061 tttctttgct aaaaattcat aaaatcttct tatttttcta agcataaaag ttttaaaatc
    21121 tattgccaat tttatatatt tttttgaaaa ataagctttt tgtaaattta gcattatatc
    21181 taaacaaact tcaatttcac ataaagtttt tgttttagga tttatatatc ttggatatat
    21241 gatcaaagca cctgctacaa gctcttctag gcttagtttt cttgttcttc tttcgcatct
    21301 atatttatct tttgttagac cccaacctgc ataaaaaggc ataccataag taaaaacttt
    21361 tttagctctt aaaagagcat caaaaccact tgtagaagta atagtgtgaa tttcatcagc
    21421 aatttttata gcactatcaa tactgcaatc ttttacaatc tcatcacaaa attccaagat
    21481 gagtgtttca tcttttaaac ccgcacggtt gccacttaac acatcaggat ggggtttaaa
    21541 gataatataa gcatcttgat ttttagaacg cacctcctta agcaaatcaa gagtagataa
    21601 accaaaaccc cctaaaatca tcgaagcatc atcttcaact tgagcgggga ttaaaataat
    21661 cttttgtcct attttggcat tgatctttaa attttcatgc tttaagccat tatattttga
    21721 aaagcggttc tcaagtaaga tttttataat attttttgct ctatttagca tattttcatc
    21781 aaaaatttcg ttttgcaaaa gctcttctag tttacttggt ttatttggat ctatgtaaag
    21841 tcctttatca tcaacgatta aagaaaaagg gcgcgtaaga tcagaaccta aagagattga
    21901 gcgaataaat ccatcttcaa ctaaagaaat tttgggagta aaatggagca aattctcatc
    21961 ttgcgctttt tttataagag tagttttaag agcgttataa tctatccttt taccccaaat
    22021 gaaaaattta tcattttctt taagtttata tctagctaaa gattttaaag aatttaaaaa
    22081 aataatttta ttatctttgg ccttaaaaaa aggcttgata aaatgccttt tccataagat
    22141 aaaacctaac ataaaaagcc tgttagaatt tgccttttct atatctttat attttgctaa
    22201 agtttgaata gtatcaaaaa tattactttt ttgatttaaa taaggattaa aatactcagc
    22261 ataaagtata taagcagcat agaaaacttc ttctaaactt cttttttgca tccttctttt
    22321 acactctaat ttatcttttg ttagacccca acctgcataa aaaggcatac cataacaaat
    22381 acactcacat tcttgcatca aagcttcaaa acccatacca gaagttttgg tataaacctt
    22441 atcaaaaaac tcaagtaagg ctatgggatt aaaattttca gtaattaaaa tacattcttt
    22501 aggtaaggaa tttatatcta aatcactttg ttttttaccg cttaaaacat caggatggat
    22561 ttttatataa attttagatt taggattttc ttttatggca tcttttatca tatcgacagt
    22621 tttaaaatct ttagcaagcc caaattcaag cgaggcatca ttggccgttt gagtgatgat
    22681 taaaaccctt ttttcatctt tttgaaaata atcatctgga atatcaagat tgttattata
    22741 cttgctaatt ttatattttt tgataagctc tatagctttt ttagcttgct tgatttcttc
    22801 atctttaaat tcataagtat ttaaaagatt ttcaagcttt gaaggtgctg ttgcatcata
    22861 ataaatgcct acatcatctt taaccataga aaaacttggg ctattttcaa cccctaagtt
    22921 taatgagcgg ataaatccat cttctaaaag tatgaattta gccttatatt ttttagctaa
    22981 attcatagct tttaaacctg attttttgcg tccccaacca aagaaaagat catctttttt
    23041 gatttttaaa tttttcttat acaaagaaat ggtgtaaaaa tttctaacat tagcaataag
    23101 tttttttgat attgagtaat acttcacaat gccaatttct ttattataag ttcaactttt
    23161 tcttctaaat tatttcgaca agaattattg atcactaaat cagcctctgg tttatcaaat
    23221 tctatatcaa caccaactac attatcaatt tctttattta aagccttagt ataaagccct
    23281 ttttgatctc tttgtattaa ttcatgcata tcgcattcta tataaatttc ataataattt
    23341 tttaattgct ttctattgta atcataaatc tcattaaaca ttgaaatcgt agtgacaata
    23401 accatcatac cttgatcgtt taaaaatttt gcaaatttag ctcttttcaa agccatatct
    23461 atgcgacctt gtctatcgta tgcataatgt cctaatattt ctcttaactc atctccatcg
    23521 agataaataa ggtttttata ttttagtttt aatttttcat acaaagcttg acctatagtt
    23581 gtttttccac ttccagctaa accagtaagc caaataatat aaggattatt tttcaatttg
    23641 cacctctaaa tcactcataa aatcaatttc acaccaattg ccatcaattt ccactgcttt
    23701 tgcgttgttg tatttttcaa ttaaagcttg caaaaaactt gtcatgtaca tattttcaaa
    23761 atttttatta tcatataaaa tatctcgatc aagcatttca taaaaagcaa taacttcgga
    23821 aagaaattga taagaaaatt taaaaagtcc tatatattga gcttctatct catcataggc
    23881 attagctttt tttccaagtt ctataatata accatttgtc atctttaatg tttcagcatc
    23941 ttctaaagga tttgcaaagc gtttgctcca aagcttacac caagacttat caactactat
    24001 agcaagttct tctttggcat ttataagctt ttgcacgcaa tcttgaaaat aaacaatatc
    24061 cgcataagaa ataatcaaat cttgtttttc ttcgatgcat tttaacataa aatctttagc
    24121 gcaaaaaaaa gtatgaacca tattggtttt atcatatttt gaattaataa aaaaatgctc
    24181 aatatcatat ttattaagat aattttttag cacatcgttt aaatatccac ccacaacagc
    24241 tatttcattt atacctgctg attttaaagc ttcgatttca taatctatta tttttttatt
    24301 cttatactca accatacact ttggttgatc ttttgttaaa ggcatcagcc ttgatccaaa
    24361 acctgctgct aagataattg cattcatatt attccttgat taaactaaac cactctttta
    24421 aaatttgaat attattaagt ccattttctc tttcaatatg ccacattata ccaaaaatat
    24481 tttcatactt atgtttaaaa gcttctatgg tattatcttt tgctaagcaa agttctacaa
    24541 gatcttcgcc taatttttca atagcaaaat tatgaaaaga attgcttata aatttttctt
    24601 ttgagaaaaa tacttcatgt ttgcctatat gattttcaca aggacttata tggctgttaa
    24661 aataatgagc tatcatctga gcccctctgc aaattcctaa aagtggtatt ttttcttcta
    24721 aacaaatttc tataacttgc ttttcatata aatctctctt tttggataaa acattaggac
    24781 tataaaaact taaatcattg ccaccactta atatcacagc ttttattaga tgtttataat
    24841 aagaaaaatc tatttcatag ctaagaggaa gaggagtaaa atttttaaat aaatctttat
    24901 taaataattt tccccaatcc aaagccaaac attctctttc ttcatgataa ctatcgttac
    24961 aaataagcct ttgagtaata cctataaaca aaatatttgc tcactttcac attctatatt
    25021 gattttttta gcttttaaat atttttcaaa attttcttct ccaactccta taacagcagg
    25081 cattccaagt tctgaggcac gaatggccat atgtgaatta gcacccccat aacatgtaat
    25141 aagtcctgct atattttttg taaataaata atcatatcca ggatctgctg cataaattaa
    25201 aacaatcttt ccttctaaat ctttatcatt ttccttcgcc gtaaatgcag taatgctctt
    25261 ttgtgtaata aaatttggaa taatgctatg attataaaaa gaaaaaattt catcagcatt
    25321 acaaagtaaa gaaggaagtt ttatagcttg tgtaagttca tattcttttt tattgcgatt
    25381 aatttcttct ataaactgct cttttggatt tatagaataa agactagaat aaagatttaa
    25441 aatgcttttt atatcaagat gagccaaatc ttctttttca atatcataat atttgcctaa
    25501 ttcttctata taaactatgg ctttagaaag caatctagta aattcaaatt taacgagctc
    25561 tctaccctcg atagcctgtt ttaaaaaatc aaaaaattca caagcattaa tttctagtcc
    25621 atgttcttta agcaaagcat ttaaagctct tgtcttttct tctgaaaaaa caaaagcttt
    25681 atcttgtaaa taaactttac tatctttttg atctgcatca aaataaagct caaaatcttc
    25741 atcatacctt ggcgataaaa tattataagt tcctgctctt aaatgtccaa aatcttttaa
    25801 aaattgatct ttgttgtgaa aattaagatg gtttgtttgt ttgcttaaat ttttgctcac
    25861 tgtattgagt gaatttaaaa aatcatcttt ttcctctttg gttataaaat caatctcaac
    25921 taaagaattt aaaagttgca ttgctacaaa tgcagcccta gccaccccag caaaaggcaa
    25981 ggttccataa cgcttgcatt cttcaataag ccaataaatt ttatcaatta aagaaaaatt
    26041 agaattaata atgccatcat atctttcttt tagcttataa gctttttgta tgtcttttaa
    26101 ataaaaccct gatctaggat taataatctt atttgtaagt tctaataatg aaaattctaa
    26161 tcttttgatt tcattttcat taaaaccatg atttaaaagt tcttctaatt ttttagaact
    26221 attaaagtca taacaagaat aaacaatatt aaattcaatc ttatcgtgca attcatgatt
    26281 tttattaagc ttatctaagt aaaaattgat aagtttttgt gcgatatttt catctaattt
    26341 ttttggtata aaagaattaa aagataatct tacatccaca taaggaatgc ctaaaaaaga
    26401 atggattaaa ggatgggatc ttagatctct ataaccataa ttatctcttt gatacgccca
    26461 gatattatcc gtaatgattt ctttatataa actaaaagct aaacgcttag gtcttaaccc
    26521 tatgatttca gctggattcc aatcaggcat taccccaaaa atagctttat ctcccaaaac
    26581 tctagatctt gattctttta aagactcaaa acgtttataa aatctatata aagcttcttt
    26641 tggtaaagaa tgaaataaat tatttttttc atgcataacc aaaggacgca cttgtaagca
    26701 aaaaagttct tccttatcat cttgaatagc aaatgcaaat tcaacatcca aaaaacaaca
    26761 gtcatataaa acttctaatt cttttataag ttctataatt ttttgaagtc taatatcttt
    26821 aaattctaaa taatttctgt aatgatagta agtttttgca ctcgtactgc ttccatctgt
    26881 aatagagcta tttgaaccat tttcatcata ttgaagacaa aaataagggg aaaaattatc
    26941 tttatcaacg ctaaaaccaa ctccacaaag agtaatgttt tcaagcatag gttgaactaa
    27001 aatttcatca ctttttgatg gcatagaatt ggcaacttca tataaggctg ctagtaattc
    27061 atctttagaa tcagctttaa tatttgccaa agaaagaaaa gcacctgcat tggagttttt
    27121 catgctatct tcacttaaag aagaacttct tataatgagt ctattagcct ttaaggtttg
    27181 aatgtcctgt aaaactttat cttcatttga tattaattct tcaagcgaag ttaaaaccaa
    27241 aggtagaact tttgcttttt ttaattttgt ttgtaaattt tttaaatttt gtgctttggt
    27301 tttaaaattt aactccgcca tgtttttcct tagttttata tttttttagc actccaacaa
    27361 cgagtggtat attttatgct aaattcctta ggaagtcttt gtgaaatttt atcactaatt
    27421 ttattaaaaa gttcatttcc ttcatcagtc tccaaatccc agtaaggatt tttaacactc
    27481 ttccatgcat taatataatt ttcaatgctt tgatgaaaat aaaaatcctc ttcaatataa
    27541 acaatattat caaaaagatc ctttcgactc tctataattg gtctttgatc ttctcttctt
    27601 gttccccttg tataatttgg tacaaattct acaatagtat cttcagctat tttttgcaca
    27661 ggatcgttta aatccctgtg attccacata caagaaaaat atccctctga ttttaataag
    27721 cgatgtgctt cctctaaggc ttcatttcta tccattacat taaaactact accaaaagtc
    27781 acccaatcaa attcactatt ttggagtgtt gagtttaagc ctgttgctct aacccagtca
    27841 atcttttgat ccttggttct ttctatcccg atctcacgca tcgcatcatt tggttctaca
    27901 gataccacct tacatcctct ttctaaaagc ataatgctta aatttccagt tcctgcaccg
    27961 atatcagcaa ctttaatatc tttttttcca actaaactaa taagcatatc tatagttttt
    28021 ggagcataat ttggtctata gctataaaat ttagcatgct tggtataatc ccacacttgt
    28081 tctactagtt tttgcatttt atttcctttt ttcatctttg acaagcttga tgaaaaaaag
    28141 gaggtatttt atgcttttct agctgtccat gctcttattt tataaggaat ctctatactt
    28201 tgcatatgag aaattttagc ttctatcatc tctaaaattt ccttccatct tttttcacct
    28261 gcttgtgctt gtatatcatt tacagaatgc caagctccaa gataacgctc tttatcccaa
    28321 aactctttat agtcacactc cataaaaaag cagtctgtga aatctcctgt tgaaacaaga
    28381 atttcttccc attttttaac attttgagtg ccactgctta cacgagcaag atctggaaca
    28441 atatgtttaa tctccttttc aatttcatca aaaaccgaac cctctacaat gtggcgagga
    28501 ttccaaatcg cagtaaaata ccccccccct gtcaatatac gattaaattc tgggagagat
    28561 tttttaggat ctgtccaatg gaaagaacta gccatgatga cccaatcagc ttgactattg
    28621 ctcatgcagg tttcttcgcc actcccttta tgccaagaaa tatttgataa attttgtgta
    28681 aatttttgcc cttcttcgcg catattatcg tttggttcca cagcactaat ttggcatcca
    28741 aacatttctc ccaacatctt agtaagtttt ccagttccag ctcctacttc aacaatattt
    28801 aaatctttaa aatttttatt tttatcattg atacaagcta caagtttttc aagtaaaaat
    28861 ggactataag caggcctatt atgataatgc tttgcaacct ctgtaaaatc cccttgtttc
    28921 atattgattc ctttctctaa ttttaaacac aattatatct tttttttatt aatttacaaa
    28981 tctttctcct aaatattacc atccaactcc ttgcacattt tttcaaattc ttgatagtat
    29041 ttccaagaag ctactatatc cggacgatgt tgcttgatat gttgcaactc ataatcaagg
    29101 atacttttta gctgctttct ataaaaacta tgttccttaa aaaacaataa aatgtctttc
    29161 tcctttatct ttttttcatt ctccaaatta atctgtttat ctatgctttt acataaatgt
    29221 tggatatata tttttacttt atcaaataag tagctatttt gatacaattt ctcaaactct
    29281 acttgtgaca ttgctat
//
LOCUS       DAPIWB010000012        29082 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.012, whole genome shotgun sequence.
ACCESSION   DAPIWB010000012 DAPIWB010000000
VERSION     DAPIWB010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 29082)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29082)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29082
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.012"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..380
                     /locus_tag="RJ266_000444"
     CDS             <1..380
                     /locus_tag="RJ266_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HDV7354224.1"
                     /translation="LSLNADIIISADNLPNVSKEFLQHNFKAPIGIVQKDKNSYEVYL
                     SDGTELEFDIDGAWKEIENKAFPFDLDFLPQNLANIIKNEFPNTKAREIERKINHYKI
                     KLDNDIKILIDFNGTILYKEFDD"
     gene            complement(389..2005)
                     /locus_tag="RJ266_000445"
     CDS             complement(389..2005)
                     /locus_tag="RJ266_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent metallopeptidase FtsH/Yme1/Tma
                     family protein"
                     /protein_id="HDV7354225.1"
                     /translation="MKNKKIILASFMVLCMLLGILYFKNEPKYIDENLYQSLLSQNLI
                     QKAVIDKDEIWLKAEGENYVIIKDGIDIKTLLSKVPVEVKKDNTLWVFFVLLIFIIAL
                     FISLGYFARKKELAKYPISNKNQNHTQAQNSNINLESSHIKPVISNITFNDVAGVDEV
                     KMELSELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGEAGVPFFYQSG
                     SSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMSNVERDSTLNQLL
                     TQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDRLKILEIYMKD
                     KNNNINLNKIAKASVGFSGAGLETLVNEAAINALRRNSALVEESDFYAVLNKVLLGKK
                     KILSFNNEEKKIQATYQAAKALSAYYFDIGFEKITLIEDRFKEYEHNIRSKSELINRI
                     KVYLAGSRAMRLIYNESYTNSQDDFLKIKELLDYMLSFDMLKESNLSEQKKEMDEFLN
                     SMKDKILKLSELLLEKEKIEYDDVKDIMQV"
     gene            complement(2009..3259)
                     /gene="mtaB"
                     /locus_tag="RJ266_000446"
     CDS             complement(2009..3259)
                     /gene="mtaB"
                     /locus_tag="RJ266_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HDV7354226.1"
                     /translation="MKEKVFFKTFGCRTNIYDTELLKSYVKDYEIINDENKAQIIVVN
                     SCTVTNGADSGIKSYVNTMQKKGIKVILTGCGAVSKGKELLDKKQVFGVLGASNKDKI
                     NEFLGAKTSFYELGNLNFIDKDIVCEYENHTKAFVKIQEGCDFACSYCIIPSVRGKSR
                     SVDEKALLKQVEILGANGYSEIVLTGTNIGSYGLKNGTSLGKLLQKMGQISGIKRIRL
                     GSLEPAQLDESFLEILDETWLERHLHIALQHTSEKMLRIMRRRSHTDNDLKLFNTIAS
                     KGYALGTDFIVAHPGESEELWQEALRNFKEFPLTHIHAFIFSPRNNTHSATMKDVING
                     TLAKERLNTLKSIVEKNNYEFRKKNQVSLEVLVENQKDGFFEGYDQFFNKIKIKSDKD
                     IAKEWIVISEYEVQEKSNFTNLKG"
     gene            complement(3256..4827)
                     /locus_tag="RJ266_000447"
     CDS             complement(3256..4827)
                     /locus_tag="RJ266_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HDV7354227.1"
                     /translation="MKKIIILTFFVVFAFGDVNRTIINNINEKINTLNTVISASIWNI
                     RYENFIKYQDINDELIILNLNLKKTSDIHQQEELKRKIANLEEQLNLLKEYKDLNFAQ
                     SLSAPDNIETLSKLTNPLAIIGAFSHIKKLKGEKEEYIFKFNDFKNLVDKIREKNSEL
                     KGLVELKPSVENIEALKASDKKLEEFEQALNFASVSYSVYEKKIDEELSRVSAEIKVQ
                     SLRAVNILVAIVIVIAIAFMLKFIAKKYIKDSERYYTATKIINFININIIFLILLFAY
                     IENITYLVTILGFASAGLAIAMKDMFMSMLGWCVIIFGGSFRVGDRIKVFQNDTTYIG
                     DIIDISFLRITLYEELTLETYNKNRRSGRIIFIPNNYVFTNLLANYTHHGMKTVLDGI
                     DISVTFDSNLDKAQEIVENIVTRHAKGYTELARKNIARLQHEYSIKNPKVEPRFFMFF
                     EHWGMRISAWYMTNAYAALVLRSTISKEIIKEFNKHKDIKIAYPSQNLYLGNLNQNHF
                     EQHHENMYFHARNKD"
     gene            complement(4824..5879)
                     /locus_tag="RJ266_000448"
     CDS             complement(4824..5879)
                     /locus_tag="RJ266_000448"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HDV7354228.1"
                     /translation="MQVEVKLKENAYKVYIDELEELEFDSKVFILSNPKISGLHLKTL
                     LSKIKAKEIFIATVKDGEEYKNLSTMEEILNQMFNSKLDRKSVLISFGGGVISDMGGF
                     AASIYQRGIDFINIPTTLLACVDAAVGGKTGVNNNFGKNLIGTFYQPKAVYCESFFLK
                     TLSSRELAAGMAEFIKMAAMFDDSILDFIEKIDEKSFLNATCENEIFTQIIAKSIELK
                     SRVVEQDEKESRFRMLLNYGHTFAHVIENFTDYKLYLHGEAVAIGMVMANQLALNLGL
                     LDKMQIQRIKDILLKFGLPISYKINNVDEFYEAFFMDKKSSNKKINFVLASPLGKGLI
                     KGDISKEDIIATLREFQ"
     gene            complement(5925..7325)
                     /locus_tag="RJ266_000449"
     CDS             complement(5925..7325)
                     /locus_tag="RJ266_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COG3400 family protein"
                     /protein_id="HDV7354229.1"
                     /translation="MNNILIIIDGILAKHFLERLCFEKGLGYFFTVVCQNSEKNNLNI
                     SSEYIDLHYFDPTSTARLENIMSKDFKQAFIYMQDEFETKKSYEALRSLNPNLEIEIM
                     DFWGLSVNDTHANLADARMTLSRRFMDFLPDIALTAQYIGLGVGEIMEVKIPAGSIFA
                     YRHISSIQQKRWRIVLIYRNSKIYFVKPSFVLEPNDSILIVGDPVVLQSIFHNIRGKA
                     GQFPMPFGSNVFALIDMKNMNQNMQERVLDTTLKLTQKSNAKRFFIHVINPKLGVMYE
                     KLKKLSEDKEGVFFDYFNTDFKQISTWLQNNDIGLVVTDIKNFEKEKQAFFDLKIPIM
                     KVGEASFDELKEAIILSADESELENNANVITDLSKQLDFGVILYYYNPNSQNTTDMEE
                     YFRSLSKLYDKNIQIINKNDENPLLNLQYREDLLQFVSFQKELLNRDFGRNLSTNLNR
                     HYYKMRQNYQLFIPVE"
     gene            7355..8476
                     /gene="tgt"
                     /locus_tag="RJ266_000450"
     CDS             7355..8476
                     /gene="tgt"
                     /locus_tag="RJ266_000450"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HDV7354230.1"
                     /translation="MEFKLKHKDGMARVCEITTAHSTFLTPVFMPVGTVGAVKSLDAN
                     DMKNELDAKIILANTYHMYLRPTSKVVKDFGGLHGFTKFDRSFLTDSGGFQAFSLSKN
                     SKHFNEGIEFKSHIDGSRHLFTPKSVLDTQYDFNSDIMMILDDLVALPATKERVKISV
                     DRTILWAKEAITYHKNMQNKGIGIGQNIFGIIQGGTDYEERKRCALSLNEMPFDGLAI
                     GGLSVGEENALMYETVQNLNPYLDENRPRYLMGVGTPEDLVENVERGVDMFDCVMPTR
                     NARNGTFFTSFGKFNIKKAKFINDHEVIDPTCSCYTCRNFSRGYLNHLFKAKELTFFR
                     LASLHNLHYYLELARKMREAILNNSFTQFKRNFYHLRGK"
     gene            8478..9245
                     /locus_tag="RJ266_000451"
     CDS             8478..9245
                     /locus_tag="RJ266_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HDV7354231.1"
                     /translation="MLELHENLKKILQAKNLETFYSEIYGQKIFVYVGLNLETWLFND
                     EKIYKLQNEEFKLSSIEEFSNFIKSILEDFKVQNTHFQNLLEHKEGIILKGGFVKNFY
                     KKSFVLRQKINKNLKQINLLSEAFNLLLSEQAQYKKHLKILNLSISILNKNTKEHLTR
                     IDTLYTLTSAIKNEKMNKSIYLLSILSSIFLPLNLIVGFFGMNTNNLFFKDSPYGTLY
                     IFSLICCILIVGFIFYHSKKTKEFDLDEGKKAKKQTK"
     gene            9298..9374
                     /locus_tag="RJ266_000452"
     tRNA            9298..9374
                     /locus_tag="RJ266_000452"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9332..9334,aa:Arg,seq:gcg)
     gene            complement(9377..9826)
                     /locus_tag="RJ266_000453"
     CDS             complement(9377..9826)
                     /locus_tag="RJ266_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354232.1"
                     /translation="MVIFCAALALLLFLGMIAYLITSDGKKTIKKQKTSQKQHVAEKT
                     KKFDTDLDKMIIAASDVKLTDIELKELAKLYVQTHKLGSKTSKELDEATKKKLEFVSA
                     LAANINASAQTVSYLNKELKKISGSYKKEIDAYEHMGLAKRKIKEDK"
     gene            complement(9842..13087)
                     /gene="ccsA"
                     /locus_tag="RJ266_000454"
     CDS             complement(9842..13087)
                     /gene="ccsA"
                     /locus_tag="RJ266_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HDV7354233.1"
                     /translation="MKNIIKSIGDLRVSVVLFLLFALFCALATFIESAYGTPTAWAMV
                     YDTFWFEYIQLLLGINLLCGMFRYKMFGLKKLPLMIFHISFLFILVGSAMTRYAGFEG
                     ILPIREHTQNSLIESSKTSLRISAIKDGERYSAVNDRYIGNLPFANSFKLKLNLGDDQ
                     AVLKYKDLILNAHYTYKENNNSDPLLVLMLSQKGSQGVDVKFEKGEVKNIEGVNFAFM
                     NDNVKAPFVKIDENLTLSSSENLHFLSMLDGQNLDLKIGEKANAKERRLYEINDISFV
                     VKAASLHAQEALEGSNRPQDESFWLWFKSAWLEVGRTMLISTFGEPQNWKNSLLLHFK
                     DFALSNENKNLELTGSNALKLELSYKNESKEFYIFEYNKPIMIELADQKFFISWALSY
                     EQLPFDIYLRDFVLDRYPGSMSPASYASEITVKNNNENFDYRIFMNNVLDYDGYRFYQ
                     SSYDQDEKGTVLSVNKDPGKIPTYIGYFLLCLGMFMNFLNPHSRFRTLARLINKDTLK
                     HTSVIIFILLLSFGSEKTFAQDLNSTLPVVNTNHAKALATLIVQKSADGRMVPFDTLS
                     REILEKIHQSDSYKGQNSNAVMLSMLVDVDKWQMEPFILMPQNQAVRDAIANILEIPS
                     AKYIAYKDFFDENNRYKLQKYVENANRKNPNARGVFDKEIIKLDERANVVNLVFSGEL
                     FKFIPVQNNPNNVWLAPFSAVTTLKGDEGHIVLALIQNYFSAVENAFKDGNWTRADEG
                     LKFIKEYQEKIGYKVMPSKTKVEMEIFSNKAEIFVKLAPVYLIAGFLLLILVFSKMVV
                     PNLKISFIFKVVYVLNVLAFVIHTVGLGLRAYLSGHAPWSNGYESMVYIAWALSLSGI
                     FFSRKSPIALSLTSILSGVVLMVAHLSEMNPQITNLVPVLNSYWLSIHVSVITASYGF
                     LGLCTLLGIFTLFLMCFLKKDGKYNLNILRNITEATRINEMAMIFGLCLLTVGNFLGA
                     IWANESWGRYWSWDSKETWALVSILVYAAILHLRMIPKYCNQFVFALWSMFAYWVIIM
                     TYFGVNYFLTGLHSYAAGEAAQIPNYVYWGFALMVVLALFARRKRNFVGKL"
     gene            complement(13105..13800)
                     /locus_tag="RJ266_000455"
     CDS             complement(13105..13800)
                     /locus_tag="RJ266_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7354234.1"
                     /translation="MLIVKDLHVYYGLIEAVKGIDFKVETGHIVSLIGSNGAGKTSTL
                     NALLNSVKRTGEVNFLGYDTKRHLTHTLVQKGIALVPEGRRVFINLSVEENLKIGAFN
                     NAENYEHLREQMYKLFPRLASKKHALAGTLSGGEAQMLAISRALMSEPKLLMLDEPSL
                     GLAPKIVGEVFDIIVRLKEEGITILLVEQNAYSALKISDYAYVLENGRIVMENEAKNL
                     IGDDEIRKKYLGL"
     gene            complement(13787..14557)
                     /locus_tag="RJ266_000456"
     CDS             complement(13787..14557)
                     /locus_tag="RJ266_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7354235.1"
                     /translation="MILELKQISKSFGSVKAINETSFKINEGEIFALIGPNGAGKTTL
                     FNIITGNYKPSSGSVEFLGERIDHLKPHKIVHLGIARTFQNIRLFSSMNVLENVLIGF
                     NKQMKYNIFEAFLHLGRFGKIEQVFKEKAYAILEELGIAEFAYEKAISLSYGQQRKVE
                     IARAMATQPRLLLLDEPAAGMNSSESDELAELIFKLRKDYKISVLLIEHDMKFVNKLC
                     DRVLVLDYGKTIFEGKLCDAVNHKEVIAAYLGNFDANS"
     gene            complement(14554..15606)
                     /locus_tag="RJ266_000457"
     CDS             complement(14554..15606)
                     /locus_tag="RJ266_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HDV7354236.1"
                     /translation="MMVRIKVSHLIFLIASIIFIFISPYIFGDYGLNIVNQIAIFIIL
                     AVSYNLINGVTGQFSLEPNGFVAIGAYAAALVLLSADAKNDQFFLDGPSSFILAIHSN
                     SFILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGIIIKIAAINFPSITNGSR
                     GLVDIPQFSTIYWTGGIAIVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIK
                     TLAFSTSAFLEGVGGGLLACLLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAI
                     LVIGGSEWLRFLDELNIKIDSLNLDIQSTPGLRMVVFSIVLILVMLFARKGIMGYYEL
                     SDVIRGIKKRFKRSKK"
     gene            complement(15606..16502)
                     /locus_tag="RJ266_000458"
     CDS             complement(15606..16502)
                     /locus_tag="RJ266_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HDV7354237.1"
                     /translation="MDSTLFLQQLVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDI
                     MMVGAYAALFCMTNLNVPFLGALSLAMIFAACVGIATDRIAYKPLRQAPRISLLITAI
                     GISFFLQNLFNMLFTSTPRTFTPPSYFEESVNFGGVITTYGSLMVPALTFVILIAVLW
                     ILYKSKYGIAIRALAFDIQTVNLMGIDANRIIAIVFALGSALAAVGGVFWAANYYSVE
                     PTMGTLIGLKAFAAAVLGGIGSVVGAVLGGLIIGFTEVVVVAFFPDLSGFKDAFAFIF
                     LVFILLFRPTGILGINFEKSRF"
     gene            complement(16521..17630)
                     /locus_tag="RJ266_000459"
     CDS             complement(16521..17630)
                     /locus_tag="RJ266_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDV7354238.1"
                     /translation="MKKSLILASILSLSLSAAEVKIGVVLPLSGATAAYGQSALEGIK
                     LANSMQSALSNGDKVSLAIIDTKGDKLESSSGANRLVSQDKVVGLIGEMVTANTLQVM
                     RVAEDNKIPLIAPAATGDRLLDKKIYSSRVCFMDSFQGSSLAKYVFSKLNYKSAVIVV
                     DQSTDYSLGLAKAFEKQYKSNGGQILRILRVNSGDKDFRAIVAQVKSLNPEFIFLPLY
                     YSEASLFARQSKLAGLNIPMGSADGVADQTFISLAGDASEGYIFTDSFDANNPTTKLS
                     KEFISVYEKAKGTKEVPNFSAMGADAYFVMLNAMNACVENLTSKCVNEKIHQTKNYQG
                     VSGVISIDQTGNATRSVVVKEIKNQKQNYKDIINP"
     gene            complement(17652..18767)
                     /locus_tag="RJ266_000460"
     CDS             complement(17652..18767)
                     /locus_tag="RJ266_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDV7354239.1"
                     /translation="MKKLTLTLSVLTMVNCLYAKDINIGVVLPLTGTVAAYGQDVFNG
                     IELANKLQPKLSNGDVIKLITIDTKGDKLETSNGVNRLIATDKVLGIIGEATTPNTIQ
                     AISIAEEKKIPLIAPVASGDKLLDKKKYASRVCFKDSFQGDKFATYVSKDLGLKNAVI
                     IIDQSNVYSLGLARAFENSFKNNGGKIIKKLVINSGDKDFRAVVSQLKSLNPDFVYMP
                     IYHPEAALIARQARQIGFDKLLAAGDGVNNQTFIDLGGSAVNGVIFTDSFDYNNPSTQ
                     LGKDFVAAYEKVKGTKELPAFSAMGADAYFVMLNAMNVCVDNLSSECINSKIHQTKDF
                     QAVGGVISIDESGNAIRSVVIKEIQNQKQNYKTIINP"
     gene            complement(18798..19232)
                     /locus_tag="RJ266_000461"
     CDS             complement(18798..19232)
                     /locus_tag="RJ266_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDV7354240.1"
                     /translation="MIIRWLFISSIFVVALFGINLKSFFTYTFDANKQYDMEKAKALY
                     FQNKCNTCHGDNAEKSVIGSRILKDMSPEDIKGALIGYTLDSSSSTTASQMAFYARNL
                     SHEDIDNIIAYIKGGNFALDLQVKDLLEEEPAQKTKHNIFLK"
     gene            complement(19241..19433)
                     /locus_tag="RJ266_000462"
                     /pseudo
     CDS             complement(19241..19433)
                     /locus_tag="RJ266_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344416.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="mini-MOMP protein"
     gene            complement(19485..19991)
                     /locus_tag="RJ266_000463"
     CDS             complement(19485..19991)
                     /locus_tag="RJ266_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqhA family protein"
                     /protein_id="HDV7354241.1"
                     /translation="MLEKIFESLLVRSRIVTILPVIFGLIGAFVLFFIASYDVLKVIF
                     YTYNYFFDAGSNVDLHEDVVALIIGAVDLYLMALVLFIFSFGVYELFISEIEEFKQTK
                     QSKVLEVHSLDQLKDKLAKVIIMVLVVNFFQRVLQMKFATPVDMAFLAGSILALCVGL
                     YFLHKGGH"
     gene            complement(20000..21031)
                     /locus_tag="RJ266_000464"
     CDS             complement(20000..21031)
                     /locus_tag="RJ266_000464"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HDV7354242.1"
                     /translation="MSKKQKIAIVGATGAVGEELLNVLDELDFPVESILPLASAKSVG
                     SEVEFKGKTYKVKELTENVFKENPIDIAFFSAGGSVSEKYAKFAVESGAVVIDNTSHF
                     RMEKDVPLVVPECNPEDIKDWKKTGIIANPNCSTIQMVQVLKPLNDAFNLKRVDVSTY
                     QAASGAGKEGMQELVEAMQSFFAFKLDEFKSQTFPYTLALNLIPQIDVFMDNDYTKEE
                     LKMVNETQKILHKNLEVSATCVRVPVLRSHSEAITMHFEKEIDVKKAKEILEKAPSVV
                     VIDDPKNKKYPMPLMTSDTNETYVGRIRADVYDKKILHLWCVADQIRVGAATNAVRIA
                     QKWLELKNK"
     gene            complement(21031..22332)
                     /gene="flgR"
                     /locus_tag="RJ266_000465"
     CDS             complement(21031..22332)
                     /gene="flgR"
                     /locus_tag="RJ266_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fla regulon two-component system response
                     regulator"
                     /protein_id="HDV7354243.1"
                     /translation="MNLVIVEDDINMRKSLEIALAEYEEFNIKSYKSATEALKKIDEN
                     TDLIITDINMPGIDGIEFVKACENKYDFIIMTGNATLSRAIEAVRLGVKDFLTKPFDV
                     DTLVEAIKRAKIIREKTADKKSKKNEKKEENKDFFSTSPNLEKTLNLSQKAAKADASV
                     MFFGESGVGKEVFSRYIHTHSKRSNKPFVAINMAAIPANLIESELFGFEKGAFTDANA
                     TKIGLFEMANEGTLFLDEIGEMPYEIQAKLLRALQEKEITRLGSTKSIKIDVRIISAT
                     NANLDEKIKNGEFRSDLYYRLNTVPINIPPLRERKEEILGIAQKVLEDTCKEYDFKEK
                     QLSQEAKNALLEYDFPGNIRELISVVQRACILSENDEISSEDLFLEARSIKKDVKNLE
                     KELICEVLLSVDYDKDQASQILGMDIKILNEKIKKYQIKDR"
     gene            complement(22389..22838)
                     /gene="flgQ"
                     /locus_tag="RJ266_000466"
     CDS             complement(22389..22838)
                     /gene="flgQ"
                     /locus_tag="RJ266_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FlgQ"
                     /protein_id="HDV7354244.1"
                     /translation="MERIVCLLIFLSFKLFAQDEFIFWAELSSKNFILFHQNQNLSLA
                     MTQSENVEEQWVCEISYSDQDLKVLPRTSLGLIDDNMPKTIKFNFLNSHKDELSDCFI
                     GARISVKDIVNTDLLRAQSETYIKILPLRFTVEFGEQNAIIYYLKKK"
     gene            complement(22814..23329)
                     /gene="flgP"
                     /locus_tag="RJ266_000467"
     CDS             complement(22814..23329)
                     /gene="flgP"
                     /locus_tag="RJ266_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly lipoprotein FlgP"
                     /protein_id="HDV7354245.1"
                     /translation="MKKIYFMLAIAGIFAGCVPSANSATKNSSTNSTAPSQDVIVQKV
                     DKDDVRDIIREEKMLAPDASETELSFTAVGEGIAPMNTVSTAQALALAKRAAITDAYR
                     QLASKLYGVKVNGKDTVKDAMLRSSTITAQVNGLIKNASIIDENFNQGLYRVNLELKI
                     DADKWKELFAY"
     gene            complement(23393..25984)
                     /gene="gyrA"
                     /locus_tag="RJ266_000468"
     CDS             complement(23393..25984)
                     /gene="gyrA"
                     /locus_tag="RJ266_000468"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit A"
                     /protein_id="HDV7354246.1"
                     /translation="MENIFSKDSDIELVDIENSIKSSYLDYSMSVIIGRALPDARDGL
                     KPVHRRILYAMQNDEAKSRTDFVKSARIVGAVIGRYHPHGDTAVYDALVRMAQDFSMR
                     YPSITGQGNFGSIDGDSAAAMRYTEAKMSKLSHELLKDIDKDTVDFVPNYDGSESEPD
                     VLPSRVPNLLLNGSSGIAVGMATNIPPHSLNELIDGLLYLLDNKDASLEEIMQFIKGP
                     DFPTGGIIYGKKGIIEAYRTGRGRVKVRAKTHIEKKTNKDVIVIDELPYQTNKARLIE
                     QIAELVKERQIEGISEVRDESNKEGIRVVIELKREAMSEIVLNNLFKSTTMESTFGVI
                     MLAIHNKEPKIFSLLELLNLFLTHRKTVIIRRTIFELQKARARAHILEGLKIALDNID
                     EVIALIKNSSDNNTARDSLVAKFGLSELQANAILDMKLGRLTGLEREKIENELAELMK
                     EIARLEEILKSETLLENLIRDELKEIRSKFDVPRITQIEDDYDDIDIEDLIPNENMVV
                     TITHRGYIKRVPSKQYEKQKRGGKGKLAVTTYDDDFIESFFTANTHDTLMFVTDRGQL
                     YWLKVYKIPEGSRTAKGKAVVNLINLQAEEKIMAIIPTTDFDESKSLCFFTKNGIVKR
                     TNLSEYQNIRSVGVRAINLDENDELVTAIIVQRDEDEIFATGGEENLENQEIENLDDE
                     NLENEESVSTQGKMLFAVTKKGMCIKFPLAKVREIGRVSRGVTAIKFKEKNDELVGAV
                     VIENDEQEILSISAKGIGKRTNAGEYRLQSRGGKGVICMKLTEKTKDLISVVIVDETM
                     DLMALTSSGKMIRVDMQSIRKAGRNTSGVIVVNVENDEVVSIAKCPKEENDEDELSDE
                     NFGLDLQ"
     gene            complement(26025..26600)
                     /locus_tag="RJ266_000469"
     CDS             complement(26025..26600)
                     /locus_tag="RJ266_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HDV7354247.1"
                     /translation="MRCINCGAFALLCFCDLCELELSEFSLNVRKLDNNFKVYSFYKY
                     HEIQHLLHSKHYFYGYFVYKMLAKLSFAKFKDFFDPRMTINVIALDDKVEDMLYSHSA
                     ILARYLKTKFVKPVFNVLKAQNSVKYSGKSLEFRQKHKRNYKLLKTIHEPVILVDDIV
                     TTGSSLLEAKKVLEENKISVLFALVLADTKV"
     gene            complement(26597..27241)
                     /locus_tag="RJ266_000470"
     CDS             complement(26597..27241)
                     /locus_tag="RJ266_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354248.1"
                     /translation="MFKKFLIFIVPILFLSACATKQDTFAQVNQISKNSQCSSCESPD
                     GFEAKIKGLLYISDVGIQCCANKRTLDTGIALKKVYLHRFYDLKEGQKVLNAKGKKLF
                     VDVNFNAVFYTYLKQELEARGIVVLDNNDQNSPYVSKIDLEFISYGATQDATGLHSKL
                     VGVLQVSDINKNKKFTIRTKQDVQGFDDLKETTFYTHLLIKQMANKAASLISEL"
     gene            complement(27318..>29082)
                     /gene="lepA"
                     /locus_tag="RJ266_000471"
     CDS             complement(27318..>29082)
                     /gene="lepA"
                     /locus_tag="RJ266_000471"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HDV7354249.1"
                     /translation="IAHIDHGKSTLADRIISECGAISDRQMSSQVMDTMDIEKERGIT
                     IKAQSVRLNYKFNNENFVLNLIDTPGHVDFSYEVSRSLASCEGALLVVDASQGVEAQT
                     IANVYIALENNLEIIPVINKIDLPNADVEKVKHEIEHIIGIDCKDAICVSAKTGVGIK
                     ELIETIITKIPAPKTDDEAPTKALIYDSWFDNYLGALALVRIYEGSIAKNDEVLVMST
                     DKKHIIQDLFYPHPLSPIKTQSLQSGEVGVVVLGLKTVGDVQVGDTITLVKNKAKEAI
                     GGFEKAKAFVFAGLYPIETDKFEDLRDALDKLKLNDSSITYEPETSLALGFGFRVGFL
                     GLLHMEVIKERLEREFNLDLIATAPTVTYEIYQTDGELVKIQNPSELPPVNKIDHIKE
                     PYVKATIITPSEFLGNLITLLNRKRGVQVKMDYITPERVLLEYDVPLNEIVMDFYDKL
                     KSLTKGYASFDYEPIEFRVGDLVKLDIKVAGENVDALSIIVPNEKAQSKGRELVSAMK
                     EIIPRQLFEVAIQASIGNKIIARETVKSMGKNVTAKCYGGDITRKRKLLEKQKEGKKR
                     MKAIGKVNLPQEAFLSVLKID"
BASE COUNT        10068 a         5373 c         3458 g        10183 t
ORIGIN      
        1 gtttatcttt aaatgctgat ataataattt ctgctgataa tttaccaaat gtttctaaag
       61 aatttttaca acataatttc aaagcgccta tagggatcgt gcaaaaagac aaaaattcct
      121 atgaagtcta tcttagcgat ggaacagagc ttgaatttga tatagatgga gcttggaagg
      181 aaattgaaaa taaagccttt ccttttgatc tagatttttt acctcaaaat ttagccaata
      241 tcatcaaaaa cgaatttcca aatacaaaag ctagagaaat tgaaagaaaa atcaaccatt
      301 ataagattaa acttgataac gatataaaaa ttcttataga ttttaatgga actatcttat
      361 ataaagaatt tgatgattaa acatatcatc aaacctgcat tatatcttta acatcgtcat
      421 attctatctt ttctttttca agcaaaagct ctgataattt taaaatttta tccttcatag
      481 aatttaaaaa ttcatccatt tctttttttt gttcacttaa atttgactct ttcaacatat
      541 caaaactcaa catataatca agcaattctt taatctttaa aaaatcatct tgcgagttag
      601 tataactttc attgtaaatc aatctcatgg ctctagaacc agccaaataa acttttatac
      661 gattgataag ctctgatttt gatcttatat tatgctcata ttctttaaaa cgatcttcaa
      721 tgagagtgat tttttcaaat cctatgtcaa aataatacgc actcaaagct tttgcagctt
      781 gataagtggc ttgaattttc ttctcttcat tattaaaact taaaatcttt ttcttaccta
      841 aaagaacttt atttaataca gcataaaaat cgctttcctc aactaaagca ctatttcttc
      901 ttaaagcatt aattgctgct tcattgacca aagtttcaag ccctgctcca ctaaaaccta
      961 cgcttgcttt agcgatttta tttaaattga tattattgtt tttatctttc atataaattt
     1021 ctaaaatttt aagtctatcc ttaaaatcag gcaaagataa aaaaattctc ctatcaaaac
     1081 gccccgaacg caataaagca ggatccataa gttcgatttt atttgtcgca gctataacta
     1141 taaccccgct attgtcctca aaaccatcca tttgagttaa aagttgattt aaagtgctat
     1201 ctctttcaac atttgacatt tctcctcttg ccttacctac ggcatctatt tcatcaataa
     1261 aaactatgct aggcgccatc attttagctt ttgaaaaaag ctctctaact ctttttgcac
     1321 ccatacctac ataaatttca acaaaacttg aaccactttg ataaaaaaat ggcacccctg
     1381 cttctcctgc aactgctttt gctatcaatg tttttcctac accaggtggg cctaccatta
     1441 aaacaccttt tggcattttt acaccaaatt ctttatattt tttaggattt tgtaaaaaat
     1501 ccacaagttc gcttagctcc attttaactt catcaacacc tgctacatca ttaaaagtaa
     1561 tatttgaaat cacaggtttt atatgggaac tttctaaatt tatatttgaa ttttgagctt
     1621 gagtgtgatt ttgattctta tttgatattg gatatttagc caactctttt ttacgagcaa
     1681 aataaccaag acttataaaa agtgcgataa taaaaataag taaaacaaaa aacacccaaa
     1741 gcgtattatc ttttttaacc tctacgggaa cttttgataa aagtgttttt atatctatgc
     1801 catcttttat aattacgtaa ttttcacctt ctgccttaag ccaaatttcg tctttatcaa
     1861 tcacagcttt ttggattaaa ttttgactta atagactttg ataaagattt tcatctatat
     1921 atttaggttc atttttaaaa tataaaattc ccaaaagcat acataaaacc ataaaagatg
     1981 ctaaaattat ctttttattt ttcattatct agccttttaa atttgtaaag ttagactttt
     2041 cttgtacttc atattcagat ataacgatcc attctttagc tatatcttta tcacttttaa
     2101 ttttgatctt attaaaaaac tgatcataac cctcaaaaaa accatctttt tgattttcta
     2161 ccaaaacttc aagtgaaact tgattttttt tcctaaattc ataattattt ttttctacta
     2221 tggattttaa agtgtttagc ctttctttag ctaaagttcc atttatcaca tctttcatgg
     2281 tagcagaatg cgtgttgttt ctagggctaa aaataaaagc atggatatga gtgagtggaa
     2341 attctttaaa atttcttaaa gcttcttgcc atagctcttc actctcgcct ggatgagcta
     2401 ctataaaatc cgtccctaaa gcatatcctt tgcttgctat agtattaaaa agctttaaat
     2461 cattatccgt atgtgatctt cttctcatta tacgaagcat tttttcactt gtatgttgca
     2521 atgcaatatg taaatgcctt tcaagccaag tttcatctaa gatttctaaa aaactttcat
     2581 caagctgtgc gggttctaaa ctacctaacc ttatgcgttt tatacctgaa atttgtccca
     2641 ttttttgcaa aagcttgcct aaacttgtgc catttttaag cccatatgaa cctatattag
     2701 tccctgttaa aacaatttca ctataaccat tagctcccaa aatttcaacc tgttttaaaa
     2761 gagctttttc atccacactt cttgattttc ccctcacgct agggataata caataagaac
     2821 aagcaaaatc acaaccttct tgaattttca caaaagcttt ggtatgattt tcatactcgc
     2881 aaactatatc tttatcaata aaatttaaat ttccaagttc ataaaaactt gtctttgctc
     2941 ctaaaaattc attgatttta tctttatttg acgctccaag cactccaaaa acttgctttt
     3001 tatctaaaag ctccttacct ttgcttacag caccacaacc tgtaagtata actttaatgc
     3061 cttttttttg catggtattt acataagact ttatcccgct atcagctcca tttgtaaccg
     3121 tgcaagaatt tacaacgata atttgtgctt tattctcatc atttataatc tcataatctt
     3181 ttacataact ttttaaaagc tctgtatcat aaatatttgt gcgacaccca aaggttttaa
     3241 aaaaaacttt ttctttcaat ccttattcct tgcatgaaaa tacatatttt catgatgttg
     3301 ttcaaaatga ttttgattta aatttcctaa atataaattt tgcgatggat aagcaatttt
     3361 tatatcttta tgcttattaa attcttttat aatctctttg ctaatcgtac ttcttaatac
     3421 caaagccgca taagcattag tcatatacca tgcagaaatt cgcattcccc aatgttcaaa
     3481 aaacataaaa aaccttggct ccactttagg atttttaata ctatattcat gttgtaaacg
     3541 agctatattt tttctagcaa gctcagtata acctttggca tggcgtgtaa caatattttc
     3601 cacaatttct tgagctttgt caagattgct atcaaaagta acacttatat caatgccatc
     3661 aagcacggtt ttcataccat gatgagtata attagcaagc aaatttgtaa aaacatagtt
     3721 attaggaata aatataatac gcccactacg acgattttta ttataagttt caagcgtaag
     3781 ctcttcataa agagtaatgc gtaaaaaaga aatgtctata atatctccta tataggtagt
     3841 atcattttga aaaaccttta tacgatcccc tactctaaaa cttccgccaa aaataatcac
     3901 acaccatcca agcatagaca taaacatatc tttcatagca atagctaagc ctgcagaggc
     3961 aaaaccaagt atagttacaa gataagtaat attttctata taagcaaaga gcaaaataag
     4021 aaaaataata tttatattaa taaaattaat aatcttcgta gcagtataat atctttcact
     4081 atccttaatg tattttttag caataaattt caacataaaa gctatagcta taacaataac
     4141 aatagcaaca agtatattta cagcccttaa gctttgaact ttaatctcag cacttactcg
     4201 agaaagctct tcatcaattt ttttctcata aacagaataa gaaacactag caaaatttaa
     4261 agcttgctca aattcttcca gctttttatc cgaagctttt aaagcttcta tattctcaac
     4321 acttggttta agctcaacta atcccttaag ttctgagttt ttttccctga ttttatctac
     4381 taaattttta aaatcattaa atttaaatat atactcttcc ttttctcctt ttaatttctt
     4441 aatatgagaa aaagctccta taatagccaa aggattagta agcttagata aagtttctat
     4501 attatcaggg gcactaagac tttgtgcaaa atttaaatct ttatattctt taagcaagtt
     4561 caattgctct tctaaatttg ctatcttgcg tttaagttct tcttgttggt gaatatcgga
     4621 agtctttttt aaattaagat ttaaaatgat taattcatca tttatatctt gatattttat
     4681 aaaattttca taacgtatat tccaaatact agcactgatt acagtattta aagtattaat
     4741 tttctcattt atattattaa taatagtccg atttacatca ccaaaagcaa aaacaacaaa
     4801 aaaggttaaa ataataattt ttttcattgg aattctctta aagttgcaat tatatcttct
     4861 ttagaaatat caccttttat caaaccctta cccaaaggac tagcaagaac aaaattgatt
     4921 tttttattag agcttttttt atccatgaaa aaagcttcat aaaattcatc tacattgttg
     4981 attttatatg atattggcaa accgaattta agtaaaatat cttttattct ttgaatttgc
     5041 attttatcca aaagccctaa atttaaagcc aattgatttg ccataaccat acctatagcc
     5101 accgcttctc cgtgtaaata aagcttataa tctgtaaaat tttctataac atgagcaaaa
     5161 gtatgaccat aatttaaaag cattctaaac cttgattctt tttcatcttg ttcaacaacc
     5221 cttgatttaa gctctatgct ttttgctata atctgagtaa aaatttcatt ctcacaagta
     5281 gcatttaaga aacttttttc atcaattttt tctataaaat caagtatact atcatcaaac
     5341 attgctgcca ttttaataaa ttcagccatg cctgcagcaa gttctctaga gctcaaagtc
     5401 tttaaaaaaa aactctcaca atatacagct ttaggttgat aaaaagtgcc aataagattt
     5461 ttaccaaaat tattattaac acctgttttt ccacctactg ctgcatcaac acaagctaaa
     5521 agtgtagtag gaatatttat aaaatcaata cctctttgat aaatactagc agcaaatccg
     5581 cccatatcac taatcacgcc accaccaaaa cttataagta cgctttttct atccaattta
     5641 gaattaaaca tttggtttaa aatttcttcc atggtgctta aatttttata ttcttcacca
     5701 tcttttacag tggcaataaa aatttctttt gccttaattt tagaaagtaa tgttttcaaa
     5761 tgaagacctg aaatcttagg atttgaaagt ataaaaacct tactatcaaa ttctaattct
     5821 tcaagttcat caatataaac cttataagca ttttctttta acttaacttc tacttgcatt
     5881 gaactactct ttttgcattt attttatcac atttaattaa ttatttattc tactggtatg
     5941 aaaagttggt aattttgtct cattttataa taatgcctat ttaaatttgt acttaaattt
     6001 ctgccaaaat ctctatttag taattctttt tgaaaactca caaattgtaa caaatcttcg
     6061 cgatattgca aatttaaaag agggttttca tcatttttat taataatttg tatattttta
     6121 tcataaagct tagataaact tctaaaatac tcctccatat ctgtagtatt ttgagaattt
     6181 ggattataat aatataaaat aactccaaaa tcaagctgtt tacttaaatc agtaatgaca
     6241 tttgcattgt tttcaagttc actctcatcg gcacttaaaa taatcgcttc tttaagctca
     6301 tcaaaagaag cttcacccac cttcataata ggaattttta aatcaaaaaa agcttgtttt
     6361 tctttctcaa aattttttat atcggttaca actaatccta tatcattatt ttgcaaccat
     6421 gtggaaattt gtttaaaatc cgtgttgaaa taatcaaaaa acacaccttc tttatcctca
     6481 gaaagttttt ttaatttttc atacattacc cctaatttag gattgataac atgtataaaa
     6541 aatctttttg cattgctttt ttgagttaat tttaaagtag tatcaagcac tctttcttgc
     6601 atattttgat tcatattttt catatcaatt aaagcaaaaa cattacttcc aaaaggcata
     6661 ggaaattgcc ctgctttgcc tcttatatta tgaaaaatac tttgtaaaac aacaggatcc
     6721 ccaacgatca aaatgctatc atttggctct agaacaaaag atggttttac aaaataaatt
     6781 ttagaatttc tataaataag gactatgcgc cacctttttt gttgtattga acttatgtgc
     6841 ctataagcaa aaatagaccc tgctggaatt tttacttcca taatctctcc aactccaagt
     6901 cctatatact gagccgttaa agcaatatct ggtaaaaaat ccataaatct acggcttaaa
     6961 gtcattctag catcagctaa atttgcatga gtatcattaa cacttaatcc ccaaaaatcc
     7021 attatttcta tttctaaatt tggatttaaa gaacgcaaag cctcataact ttttttagtt
     7081 tcaaattcat cttgcatata aataaaagcc tgtttaaaat ccttactcat aatattttca
     7141 agacgcgctg tgcttgtagg atcaaaataa tgcaagtcaa tatactcact agaaatattt
     7201 aagttatttt tttcactatt ttgacacact actgtaaaaa agtaacctaa gcctttttca
     7261 aaacaaagcc tttctaagaa atgctttgct aaaataccat ctattataat taaaatatta
     7321 ttcattttaa actccaaaaa ggaaattata acaaatggaa tttaaattaa agcataaaga
     7381 tggaatggca agggtttgtg aaatcactac cgcacacagc acttttttaa cccctgtttt
     7441 tatgcctgtt ggcacagtag gagcggttaa aagtcttgat gctaatgata tgaaaaatga
     7501 gcttgatgca aaaattattt tagcaaatac ctatcacatg tacttgcgtc caacttccaa
     7561 agtagtaaaa gattttggag gtttacatgg atttacgaaa tttgatagaa gttttttaac
     7621 cgatagtggt ggttttcaag ctttttcttt aagtaaaaat tccaaacatt ttaatgaagg
     7681 catagaattt aaaagtcaca ttgatggaag tcgtcatctt tttactccaa aaagtgtttt
     7741 agatactcaa tatgatttta attctgatat tatgatgatt ttagatgatt tagtagctct
     7801 acccgcaacc aaagaaaggg ttaaaatttc tgttgatcgc actatacttt gggcaaaaga
     7861 ggctattact tatcataaaa atatgcaaaa taaaggtata ggtatagggc aaaatatttt
     7921 tggtattatc caaggtggta cagattatga agaaagaaag cgttgcgctt taagtttaaa
     7981 tgaaatgcca tttgatggtt tagctatagg tgggcttagc gtgggcgaag aaaacgcctt
     8041 gatgtacgaa acagtccaaa acttaaaccc ttatctagac gaaaatcgtc caagatattt
     8101 aatgggcgta ggaacgcctg aagatttagt agaaaatgtt gagcgagggg tagatatgtt
     8161 tgactgcgtg atgccaacta gaaatgcaag aaatggaaca ttttttacaa gttttggaaa
     8221 atttaatatt aaaaaagcaa aatttatcaa cgatcatgaa gttatagatc ctacttgctc
     8281 atgttatact tgtcgtaatt tttcaagggg ttatttaaac catcttttta aagctaaaga
     8341 acttactttt tttcgtttgg caagtctgca caatctacat tattatcttg aacttgcaag
     8401 aaagatgcgt gaagcaattt tgaacaattc ttttacgcaa tttaaaagaa atttttatca
     8461 cttaagaggc aaataaaatg ctagagctac acgaaaatct aaaaaaaatc ctgcaagcaa
     8521 agaatttaga aactttctat agcgaaattt atggacaaaa aatttttgtt tacgtgggat
     8581 taaatttaga aacttggctt tttaatgatg aaaaaattta taaacttcaa aatgaagaat
     8641 ttaagctttc tagcatagaa gaattttcaa attttattaa atctatttta gaagatttta
     8701 aagtacaaaa tactcatttt caaaaccttt tagaacacaa agaaggtatt atcttaaaag
     8761 gtggttttgt taaaaatttt tacaaaaaat cctttgtttt aagacaaaaa attaacaaaa
     8821 atctaaagca aattaatctt ctaagtgaag ctttcaatct tttgcttagc gaacaagcac
     8881 aatacaaaaa acatttaaaa attctaaatt tatccatcag catcttaaat aaaaatacca
     8941 aagaacatct aacaagaatt gatactcttt atacattaac aagtgcaatt aaaaatgaaa
     9001 aaatgaataa aagtatttat cttttaagca tactttcttc tattttctta cctttaaatt
     9061 tgatcgtagg attttttgga atgaatacta ataatctttt tttcaaagat agcccttatg
     9121 gtacacttta tattttttct ttgatttgct gtattttgat tgtaggtttt atattttatc
     9181 attcaaaaaa gactaaagaa tttgatttag atgaaggtaa aaaagctaaa aaacaaacaa
     9241 aataagcaaa attttgctta ttttaagaat atttatatat aattttaact tatttttgcg
     9301 ctcatagctc agctggatag agcatttgat tgcggttcaa aaggccagag gttcgaatcc
     9361 tcttgagcgc accatattat ttatcttctt taatttttct tttagctaat cccatatgct
     9421 cgtaagcatc aatttctttt ttgtaagatc cagaaatttt cttaagttct ttatttaagt
     9481 aacttactgt ttgtgcactt gcattaatat ttgcagccaa agcagaaaca aattctagtt
     9541 tcttttttgt tgcttcatct aattctttag aagtttttga accaagttta tgtgtctgca
     9601 cataaagttt ggcaagttct tttaattcaa tatctgttag cttaacatcg gaagcagcaa
     9661 ttatcatttt atctaagtct gtatcaaatt ttttagtctt ttcagctaca tgctgctttt
     9721 ggctagtttt ttgcttttta attgtttttt tgccatcgct tgtaataaga taagcaatca
     9781 tgcctaaaaa caataaaagc gctaaagcag cacaaaaaat aaccaaaaaa atatggctca
     9841 tttacagttt gcctacaaaa tttcgcttcc ttcttgcaaa aagagctaaa accaccatca
     9901 acgcaaatcc ccaataaaca taattaggaa tttgagccgc ttcgcctgca gcgtaagaat
     9961 gaagtcccgt taaaaagtaa tttactccaa aataagtcat aataataacc caataagcaa
    10021 acatactcca taaagcaaac acaaattgat tacaatattt tggaatcatt ctaagatgca
    10081 aaattgctgc ataaaccaaa atgctaacta aagcccaagt ttccttagaa tcccaactcc
    10141 aatatctccc ccaactttca tttgcccaaa ttgcacctaa aaaatttcct acagtaagca
    10201 aacaaagtcc aaaaatcatt gccatttcat taattcttgt agcctctgta atatttctca
    10261 aaatattaag attatatttt ccatctttct taagaaaaca cattaagaac agtgtaaaga
    10321 taccaagtaa ggtacaaagt cctaaaaatc cataactagc agtaataaca gatacatgaa
    10381 tactaagcca ataagaattg agcacaggaa caagatttgt aatttgcgga ttcatttcgc
    10441 ttaaatgtgc aaccattaat acaacaccgg ataaaataga agttaatgac aaggctatag
    10501 gactttttct agagaaaaat atacccgaca aagacaacgc ccaagctata tacaccatac
    10561 tttcatagcc attactccac ggagcatgac ctgataaata agcacgaagt ccaagaccta
    10621 ctgtatgaat tacaaaagct aaaacattta aaacatatac cactttaaat ataaaagaga
    10681 tttttaaatt cggtacgacc attttagaaa aaacaagaat caaaagtaaa aaacccgcaa
    10741 ttaaatatac aggagcgagt ttaacgaaaa tttcagcctt attagaaaaa atttccattt
    10801 caaccttggt tttactaggc atgactttat atcctatttt ttcttgatat tctttgataa
    10861 atttcaagcc ttcatcagct ctagtccaat taccatcttt aaaagcattt tccacggcac
    10921 taaaataatt ctgtattaaa gccaaaacaa tatgcccttc atccccctta agagtagtta
    10981 cagcagaaaa aggtgcaagc caaacattat ttggattatt ttgaacagga ataaatttaa
    11041 ataattcacc actaaaaact aaatttacaa cattagctct ttcatctagt tttataattt
    11101 ccttatcaaa aactcctctt gcatttgggt ttttacgatt tgcattttca acatattttt
    11161 gaagtttata gcggttattc tcatcaaaaa aatctttata agcaatatat ttagcactag
    11221 gaatttctaa aatatttgca atagcatcac gaactgcttg attttgtggc attaaaataa
    11281 aaggttccat ttgccattta tctacatcaa cgagcatgga aagcataaca gcgttagaat
    11341 tttgaccctt atagctatca ctttgatgaa ttttttctaa aatttctctt gatagcgtat
    11401 caaaaggcac cattcttcca tctgctgatt tttgaactat taaagtggca agagctttag
    11461 catgattagt atttaccaca ggtaaggtcg aatttaaatc ttgagcaaaa gtcttttcag
    11521 aaccaaaaga taacaataaa ataaaaataa tcacacttgt atgttttaaa gtgtctttat
    11581 taattaatct tgccaaagtt ctaaatctag aatgtggatt taaaaaattc ataaacattc
    11641 caagacaaag cagaaaataa cctatataag ttggtatttt gcccggatct ttatttacag
    11701 ataaaacagt ccctttttca tcttgatcat aagaactttg ataaaatcta tagccatcat
    11761 aatctaaaac attattcata aaaattctat aatcaaaatt ttcattatta ttttttacgg
    11821 taatttcact tgcataagaa gctggagaca tagaacctgg ataacgatct aatacaaaat
    11881 ctcttaaata aatatcaaaa ggcaattgtt cataagaaag cgcccaagaa ataaagaatt
    11941 tttgatctgc aagttctatc ataataggtt tattatattc aaaaatataa aattctttac
    12001 tttcattttt atagcttaat tctaatttta aagcattaga gccagttaat tctaagtttt
    12061 tattctcatt gcttaaggca aaatctttaa aatgcaataa taaagaattt ttccaatttt
    12121 gaggctcgcc aaaagtagaa atcaacatag ttctacccac ttctaaccaa gcagatttaa
    12181 accataacca aaaactttca tcttgaggtc tattggaacc ttctaaagct tcttgcgcat
    12241 gcaaagaagc agctttaact acaaaactaa tatcattaat ttcataaagt cttctttcct
    12301 tagcatttgc cttttctcca attttaaggt ctaaattttg tccatctagc atgcttagaa
    12361 aatgtaagtt ttcacttgaa cttaaagtta aattttcatc aatttttaca aaaggtgctt
    12421 taacattatc attcataaaa gcaaagttaa ccccttctat attcttaact tcaccttttt
    12481 caaatttaac atcaacacct tgagatcctt tttgagaaag catcaaaacc aataaaggat
    12541 cagaattatt attttcttta taagtataat gagcatttaa gattaaatct ttatatttta
    12601 atacagcttg atcatcacct aaattaagtt ttagtttaaa agaattagca aaaggcaaat
    12661 ttcctatata acgatcatta accgcactat agcgttctcc atcttttata gcagaaatac
    12721 gcaaagaagt cttagaactt tctataagtg aattttgagt atgctctcta ataggtaaaa
    12781 taccttcaaa accagcatat cttgtcattg cagaacccac taaaataaat aaaaaagaaa
    12841 tatgaaaaat cattaaaggt aattttttaa gcccaaacat tttataacga aacatcccgc
    12901 atagtaaatt aataccaagt aaaagttgta tatattcaaa ccaaaaagta tcataaacca
    12961 ttgcccaagc cgtaggagtt ccataagcac tttcaataaa agttgccaaa gcacaaaaaa
    13021 gcgcaaaaag caaaaacaat acaaccgaaa ctcttaaatc ccctatgctt tttattatat
    13081 ttttcattct ttttccttta aattttaaag ccctaaatat ttctttctaa tctcatcatc
    13141 acctattaaa tttttagcct cgttttccat tacaatgcga ccattttcca aaacataagc
    13201 ataatcactt atttttaatg cagaataagc attttgctct accaaaagaa tagttatacc
    13261 ctcttctttt aaacgcacaa taatatcaaa aacttcaccc acaatctttg gagcaagtcc
    13321 caaagaaggc tcatccaaca tcaaaagttt tggttcactc attaaagccc ttgaaatcgc
    13381 aagcatttgc gcttcccctc cactcaatgt tccagctaaa gcatgctttt tacttgcaag
    13441 tcttggaaaa agtttataca tttgctctct taaatgctca taattttcag cattattaaa
    13501 agcacctatt tttaaatttt cctctacgct taaattaata aaaacacgcc ttccttcagg
    13561 aactaaagct ataccttttt gaactaaagt atgagttaaa tgccttttag tatcataacc
    13621 taagaaatta acctcaccag ttcttttaac tgagtttaaa agcgcattta aagttgaagt
    13681 tttacctgct ccatttgaac ctataagaga aacaatatga cctgtttcca ctttaaaatc
    13741 aatcccttta acagcttcaa ttaatccata ataaacatgc aaatctttaa ctattagcat
    13801 caaaattccc taaatacgca gcaattactt ctttatgatt tacagcatcg caaagtttac
    13861 cttcaaaaat tgtttttcca taatcaagta ccaatacgcg atcacacaat ttatttacaa
    13921 atttcatatc atgttctata agcaaaacgc taattttata atcttttcgt aatttaaaaa
    13981 tgagctcagc aagttcatca ctctcagagc tattcatccc agcggctggc tcatcaagca
    14041 ataataatct tggttgagta gccattgctc ttgcaatctc aacttttctt tgttgtccat
    14101 aactcaagct aatagccttt tcataggcaa attctgcaat accaagttct tctaatattg
    14161 cataagcctt ctctttaaat acttgttcta tttttccaaa acggcctaaa tgcaaaaagg
    14221 cttcaaaaat attatatttc atttgtttat taaaaccaat aagaacattt tcaagcacat
    14281 tcatgcttga aaaaagccta atattttgaa atgttctagc tattcctaaa tgcacaatct
    14341 tatgaggttt taagtgatca attctttctc ctagaaattc aaccgaacct gaactaggtt
    14401 tatagttacc tgttataata ttaaaaagag ttgttttgcc agccccatta ggtccaatta
    14461 aagcaaaaat ttcaccctca ttgattttaa aagaagtttc attaatagcc ttaacactac
    14521 caaaactttt tgaaatttgt tttaattcca aaatcatttt ttgctccttt taaaacgctt
    14581 tttaatccct ctaatcacat cactcaactc ataataaccc attatgcctt ttcttgcaaa
    14641 aagcattact aagatcagaa caatagaaaa aacaaccatt ctaagccctg gcgttgattg
    14701 gatatcaaga tttaaagaat ctatttttat atttaactca tctaaaaatc taagccactc
    14761 acttccacca ataaccaata tcgcacctat aatagcacct gtagtagaac caagtccacc
    14821 taaaacaata ataatcaaaa gctgaaaagt aagtaaaaaa tcaaattgag ttggagatac
    14881 ggtagtcaac agacaagcta aaagtccgcc acctacacct tctaaaaatg ctgaagtgct
    14941 aaaagctaaa gtttttatcc aaaaagtatt tattcccata gcgcttgcag catcttcatc
    15001 atctcttata gccttcattg cacgaccata tttagaataa actatattta aaattaaaat
    15061 aaccgctaca atagcaatac cacctgtcca atagatcgtg gaaaattgtg gaatatctac
    15121 cagccctctt gagccattag taatagaagg aaaattaata gcagctattt taataattat
    15181 tccaaagcct aaagttacaa tagccaaata atcccctctc acgcgaaata cagcaaaagc
    15241 caaaatcagg gcaagtaaag atgaacaaat tccagccaca attaaagcta gaataaagga
    15301 atttgaatgg atagctaaaa taaaagaact aggaccatct aaaaaaaact gatcattttt
    15361 tgcatcagca cttaaaagaa ctaaagcagc cgcataagct ccaatcgcaa caaatccatt
    15421 gggttctagt gaaaattgtc cagttacacc attaataaga ttgtaactca cagccaaaat
    15481 aataaaaata gcaatttgat taacaatgtt taatccataa tccccaaaaa tataaggaga
    15541 aatgaaaata aaaataattg aagcaattaa aaagattaaa tgtgaaacct taattctaac
    15601 catcattaaa acctactctt ttcaaaattt atacctaaaa ttcccgtagg cctaaataac
    15661 aatataaaca ccaaaaaaat aaaagcaaat gcatctttaa agcctgataa atctggaaaa
    15721 aaagccacaa caacaacttc agtaaatcct ataataagtc cacccaaaac tgcacctact
    15781 acagaaccta tacctcctaa aactgcagca gcaaaagctt ttaaacctat taaagttccc
    15841 atagtaggtt caacagagta ataatttgca gcccaaaaaa cacccccaac tgctgccaaa
    15901 gctgaaccta gggcaaaaac tatagcaata atacgatttg catctatacc cattaaattt
    15961 actgtttgta tatcaaatgc caaagcacga atagctatac catatttgct tttatacaaa
    16021 atccataaca ctgctattaa aataacaaat gtaagagcag gaaccattaa agaaccataa
    16081 gttgttatca ctccaccaaa attaacactt tcctcaaaat aacttggcgg tgtaaaagtt
    16141 ctaggtgttg aagtaaaaag catattaaaa agattttgca agaaaaaact aataccgatt
    16201 gctgtaatca acaatgaaat tctaggagcc tgtcttaaag gtttataagc gattctatct
    16261 gtagctattc caacacaagc agcaaaaatc attgctaaag acaaagctcc tagaaaagga
    16321 acatttagat tagtcatgca aaaaagagcc gcataagcac caaccatcat aatatcgccg
    16381 tgagcaaaat taataagtct taacacacca taaaccatcg tatagccaac agcaataaga
    16441 gcatacatac tgcccaaact aagtccatta acaagttgtt gtaaaaataa agtagaatcc
    16501 ataatctttc tatttttcct ttaaggattg ataatatctt tataattttg cttctgattt
    16561 ttaatttctt taaccactac agaacgagtt gcatttcctg tttgatcaat actgataaca
    16621 ccagaaacac cttgataatt tttagtttgg tgaatttttt cattgacaca cttactagta
    16681 agattttcaa cgcaagcatt catagcattt agcattacaa aatacgcatc agcacccata
    16741 gccgaaaaat ttggaacttc ttttgttcct ttagcttttt cataaacact gataaattct
    16801 ttgcttaatt ttgtagttgg attattagca tcaaaactat ctgtgaaaat ataaccctcg
    16861 cttgcatctc cagctaaact aataaaagtt tgatcagcaa ctccatctgc agaacccata
    16921 ggaatattta aacctgcgag ttttgattgt cttgcaaata aagaagcttc gctataataa
    16981 agcggtaaaa aaataaattc tggatttaaa cttttaactt gagctacaat agctctaaaa
    17041 tctttatcac ctgaattaac tcttaaaatt ctaagaattt gaccaccatt agacttgtac
    17101 tgtttttcaa aagcttttgc taaacctaag gaatagtcag tgctttgatc tactacaata
    17161 acagcacttt tgtaattaag ttttgaaaaa acatattttg ctaaagatga accttgaaaa
    17221 ctgtccataa aacatactcg agaagaatat atttttttat caagcaatct atcaccagtt
    17281 gcagcaggag cgatcaatgg aattttatta tcttctgcta cgcgcataac ttgcaatgta
    17341 ttagcagtaa ccatttcccc tataaggcct acaactttat cttgagaaac taaacgattt
    17401 gctccactcg aagattctaa tttatcacct ttagtatcaa taatagcaag agaaacctta
    17461 tctccattac ttaaagctga ttgcattgaa tttgcaagtt taatcccttc tagtgcgctt
    17521 tgtccatatg ctgcagtagc tccgctaagc ggtaaaacaa ctcctatttt gacttccgca
    17581 gcacttaaac ttaaacttag aatacttgct aaaattaaac tttttttcat tctctacctt
    17641 tattttagta attatggatt tataattgtt ttataatttt gtttttgatt ttgaatttct
    17701 ttaatcacaa cagaacgaat ggcattaccg ctttcatcta tgctaatcac accaccaaca
    17761 gcttgaaaat ctttagtttg atgaattttg ctattaatac attcgctgct aagattatca
    17821 acgcaaacat tcatagcatt taacattaca aaatacgcat cagcccccat agccgaaaat
    17881 gctggaagtt cttttgttcc tttaactttc tcataagctg caacaaaatc ttttcctaat
    17941 tgtgtagatg gattgttata atcaaaacta tcagtgaaaa ttactccatt aacagcactt
    18001 ccgccaagat ctataaaagt ttgattgtta acaccatctc ctgctgctaa aagtttatca
    18061 aaaccaattt gtcttgcttg tctcgcaatt aaagcagctt caggatgata aataggcata
    18121 taaacaaaat caggatttaa actcttaagt tgagaaacca cagctctaaa atctttatct
    18181 cctgaattaa taacaagttt ttttataatt ttcccaccat tattcttaaa agaattttca
    18241 aaagctcttg ccaaacctaa agaataaaca ttgctttgat ctatgatgat aacagcattt
    18301 ttaagcccta aatccttaga tacataagta gcaaatttat ctccttgaaa actgtcttta
    18361 aaacaaactc tacttgcata tttcttttta tctagcaatt tatctccaga tgctactgga
    18421 gctattagag gaattttttt ctcttctgct atagaaatag cttgaatggt atttggagtt
    18481 gtagcttcac caataatccc gaggacttta tctgttgcta ttaaacgatt aactccgttt
    18541 gaagtttcaa gcttatctcc ttttgtatct attgtgataa gtttaataac atctccattt
    18601 gaaagttttg gctgtagctt attagccagt tcaattccgt taaaaacatc ttgcccataa
    18661 gctgccacag ttccagttaa aggtaaaact actcctatat taatatcctt agcatataag
    18721 caatttacca tagttaaaac acttaaagtt aaagttagtt ttttcatagc attcctttta
    18781 attatagttt ttacatttta ttttagaaat atattatgtt ttgttttttg cgcaggttct
    18841 tcttcaagaa ggtcttttac ttgcaaatca agcgcaaaat ttccaccttt aatataagca
    18901 ataatattat ctatatcctc gtggcttaaa tttctagcat aaaaagccat ttgagaagct
    18961 gttgtagaac tgctactatc aagagtataa cctatcaaag ctcctttaat atcctcagga
    19021 gacatatctt ttaaaattct agatcctata acactctttt cagcattatc tccatggcaa
    19081 gtattgcatt tattttgaaa atacaaagcc ttcgcttttt ccatatcata ttgcttattt
    19141 gcatcaaagg tataagtaaa aaatgatttc aagttaatac caaaaagcgc aacaacaaat
    19201 attgaactaa taaacaacca tcgtataatc atgattttcc ttattttatt gtaatttccg
    19261 tttgtgtttt attttgatat ctatgtgttt ttttgttgta tttttttttc ttttttaata
    19321 tcatagcgat aatgaacagt ccctgaaact tctatatctt taaagacttc atctaacgga
    19381 gctgcaaaaa caaaatgatt taaaatcata ccaattaaaa atattttttt catttttatt
    19441 ctttaaacac aaaagacgat tatatcaaaa aaagataatc cttgttaatg accacctttg
    19501 tgtaaaaaat aaagtcctac acaaagagct aaaatcgatc cagcgagaaa agccatatcc
    19561 acaggagtag caaatttcat ctgcaaaacc ctttgaaaga aatttaccac taagaccata
    19621 ataataactt ttgcaagctt gtcttttaat tgatctaagc tatgcacctc taaaaccttg
    19681 ctttgttttg tttgtttaaa ttcttctatt tcactgataa aaagctcata aactccaaaa
    19741 gaaaaaataa acaaaactaa agccataaga taaagatcaa cagctcctat aattaaagcc
    19801 accacatcct catgcaaatc cacattagaa cctgcatcaa aaaaataatt ataagtataa
    19861 aatataactt ttaaaacatc ataacttgca ataaaaaaca atacaaaagc tccaattaaa
    19921 ccaaaaatta cgggtaaaat tgtaacaata cgacttctaa caagtaaaga ttcaaatatt
    19981 ttctctaaca tttttttcct tatttatttt ttaattctaa ccatttttgc gcaatacgca
    20041 cagcatttgt tgcagcacct acacgaattt gatctgccac acaccaaaga tggagtattt
    20101 ttttatcata cacatcagca cgaattcttc ctacataagt ttcattagta tcacttgtca
    20161 ttaaaggcat agggtatttt ttatttttag gatcatctat gacaacaaca cttggtgctt
    20221 tttctaaaat ttctttagct ttttttacat ctatttcttt ttcaaaatgc atagtaatgg
    20281 cttcgctatg acttcttaaa acaggcactc taacacaagt tgctgaaact tctaaatttt
    20341 tatgtaaaat tttttgagtt tcattaacca ttttaagttc ttctttagtg taatcattat
    20401 ccataaaaac atcaatttgc ggaataagat taagtgccaa agtataagga aaagtttgag
    20461 atttaaactc atcaagttta aaagcaaaaa aactttgcat ggcttcaacc aattcttgca
    20521 ttccttcttt tcctgctcca cttgcagcct gataggtact tacatcaaca cgctttaaat
    20581 taaatgcatc atttaaaggt tttaaaactt gcaccatttg tatggtagaa caatttggat
    20641 tagcaataat ccctgttttt ttccaatctt taatatcctc aggattgcat tcaggaacca
    20701 ccaaaggaac atctttttcc attctaaaat gacttgtatt atcaataaca acagcacccg
    20761 attctactgc aaatttagca tatttttcac tcacacttcc acctgcgcta aaaaaagcaa
    20821 tatcaatagg attttcttta aatacatttt cagtaagttc tttgacttta taagttttgc
    20881 ctttaaattc tacttcacta cctacacttt ttgcacttgc taaaggtaaa atactttcca
    20941 ctggaaaatc aagttcatct aaaacattta aaagctcttc cccaaccgca ccagtagcac
    21001 ccacaatggc tattttttgt ttttttgaca ttacctatcc tttatttgat attttttaat
    21061 tttttcattt aaaattttta tatccatacc taaaatttga gaagcttgat ccttgtcata
    21121 atctacactt aaaagaactt cacaaatcaa ttctttctct aaattcttta catctttttt
    21181 tatacttcta gcttctaaga acaaatcttc acttgaaatt tcatcatttt cacttaaaat
    21241 acaagctctt tgtacaacgg atattaattc tctaatatta ccaggaaaat catattcaag
    21301 taaagcattt ttagcttctt ggctgagctg tttttcctta aaatcatatt ctttacaagt
    21361 atcttctaaa accttttgag ctatacctaa aatttcttct ttgcgctctc ttaaaggcgg
    21421 gatattaata ggaacagtgt ttaaacgata atataaatct gaacgaaatt cgccattttt
    21481 tattttttca tctaaatttg cattagttgc actgataatt cttacatcta ttttgatgct
    21541 tttcgtactt ccaagtcgcg taatttcttt ttcttgcaaa gctcttaaaa gtttggcttg
    21601 aatttcataa ggcatttcgc caatttcatc taaaaacaaa gtaccctcat tagccatttc
    21661 aaaaagccct attttagttg cattggcatc ggtaaaagca cctttttcaa aaccaaaaag
    21721 ctcactttca atcaaatttg caggaatggc tgccatatta atagcaacaa aaggcttatt
    21781 agagcgttta gaatgagtgt gaatataacg agaaaatacc tcttttccta ctccactctc
    21841 tccaaaaaac attacagagg catcagcttt agccgctttt tgacttaaat ttaatgtttt
    21901 ttctaaatta ggagaagttg aaaaaaaatc tttattttct tctttttttt catttttttt
    21961 acttttttta tcggctgttt tttctcttat gattttagca cgcttaatag cctcgactaa
    22021 agtatcaaca tcaaaaggct tggttaaaaa atcttttact cccaaacgaa ccgcttctat
    22081 agcacgactt aaagtagcat ttcctgtcat aataataaaa tcatatttat tttcacaggc
    22141 tttaacaaat tctatgccat caattcctgg catattaata tctgtaataa tcaaatctgt
    22201 attctcatct atttttttta aagcttcagt agcagattta taagatttaa tattaaattc
    22261 ttcatactct gctaatgcaa tttctaagga tttgcgcata ttaatatcat cttctactat
    22321 gactaaattc atcctaagcc ttttaaaaaa tttctactat agtatccaat ttgcgcttaa
    22381 ttttgaattt actttttttt aagataataa attatcgcat tttgttcgcc aaattccacg
    22441 gtaaaacgca agggtaaaat tttaatataa gtttcacttt gagcacgtaa taagtcagta
    22501 ttaacaatat ccttaacact gattctagcc cctataaagc aatcacttaa ctcatcttta
    22561 tgagaattta aaaaattaaa tttaattgtt tttggcatat tatcatcaat taatcctaaa
    22621 gaagttcgag gtaaaacttt taaatcttga tcactataag aaatttcaca tacccattgt
    22681 tcttcaacat tttcactttg cgtcattgct aaggataaat tttgattttg atgaaagaga
    22741 atgaaatttt tactagaaag ctctgcccaa aaaataaatt catcttgggc aaaaagctta
    22801 aagctaagaa agattaataa gcaaacaatt ctttccactt gtctgcatcg attttaagtt
    22861 ctaagtttac tctataaagt ccttgattaa aattctcatc aataatactt gcatttttta
    22921 tcaaaccatt tacttgcgca gtaatagttg aacttctaag cattgcatct tttacagtgt
    22981 ctttaccatt cactttcaca ccataaagtt tacttgcaag ctgtctgtaa gcatctgtaa
    23041 tcgctgctct ttttgctaaa gctagagctt gagcagtaga aactgtattc attggagcaa
    23101 ttccttcacc aactgctgta aaactaagtt ccgtttcgct agcatctgga gccaacattt
    23161 tttcttctct gataatatca cgcacatcat ctttatcgac tttttgcacg ataacatctt
    23221 gagatggagc agtgctattt gtacttgaat ttttagttgc actgtttgca cttggtacac
    23281 aaccagcgaa aattcctgct attgctagca taaaataaat ttttttcatt tttacacctt
    23341 caaaatattg taattagtaa aataaaaagc aataagcgtt ccaactttaa acttattgca
    23401 aatctaaacc aaagttttca tcgcttaact catcctcgtc attttcctct ttaggacact
    23461 tagcgatgct aaccacctcg tcattttcca cattaactac aatgacacca ctcgtattac
    23521 gccctgcttt tctaatgctt tgcatatcaa cacgtatcat cttacctgaa cttgtaagag
    23581 ccattaaatc catagtttca tctactataa ctacgctaat aagatctttg gttttttctg
    23641 taagtttcat acaaattaca cccttaccac ctctgctttg caatctatat tctccagcat
    23701 tggtgcgttt tcctatacct tttgcactta tgcttaaaat ttcttgctca tcattttcta
    23761 taacaactgc acctactaat tcgtcatttt tctctttaaa cttaatagcc gtcactccac
    23821 gacttacacg gccgatttca cgcactttag caagtgggaa tttgatacac ataccttttt
    23881 tggttactgc aaagagcatt ttaccttgtg tgcttacact ttcttcattt tcaagatttt
    23941 catcatctaa attttcaatt tcttgatttt ctaaattttc ttcaccacca gtggcaaaaa
    24001 tttcatcttc atctctttga acaataatag cagttaccaa ctcatcattt tcatccaagt
    24061 tgatcgctct aactcctaca cttctgatat tttgatattc actcaaattt gtacgcttta
    24121 caataccatt tttagtaaag aaacataaag atttactctc atcaaaatcc gtggttggaa
    24181 taatagccat gattttttct tcagcttgta aattaataag atttaccact gcttttcctt
    24241 tagccgttct tgagccttca ggaattttat aaactttaag ccaataaagc tgtccacgat
    24301 ctgttacaaa cataagtgta tcatgtgtat ttgccgtaaa gaaactttct ataaaatcat
    24361 catcataagt cgtaacggct aattttcctt ttccgcctcg tttttgcttt tcatattgtt
    24421 tactaggcac acgcttaata taaccacgat gcgtaatagt tacaaccata ttttcattag
    24481 gaatcaaatc ttcaatatca atatcatcat aatcatcttc aatttgagta atacgtggca
    24541 catcaaattt acttctaatt tcttttaatt catcgcgaat taaattttca agcaaggttt
    24601 cactttttaa aatttcttca agtcttgcaa tttctttcat taattctgca agttcatttt
    24661 cgattttttc tctttcaagt cctgttaaac gaccaagttt catatccaaa atagcattgg
    24721 cttgaagctc actaagacca aatttagcta ctaaagaatc tcttgcggta ttattatcag
    24781 aactattttt aattaaagca atcacttcat ctatattatc aagtgcaatt ttaagacctt
    24841 ctaaaatatg agctcttgct cttgcctttt gaagttcaaa aatcgttctt ctaataataa
    24901 ctgtttttct atgagttaag aaaagattta aaagttccaa caaagagaaa attttaggtt
    24961 ctttattatg aattgccaac ataatcacac caaaagtact ttccatagtg gtagatttaa
    25021 atagattatt taaaacaatt tcactcatag cctcacgttt aagctctata acaacgcgga
    25081 ttccttcttt attactctca tctcttactt cagatattcc ttcaatttgc ctttctttaa
    25141 caagctctgc aatctgctct ataagcctag ctttattggt ttgataagga agctcatcga
    25201 taacaataac atctttattt gtcttttttt caatatgagt tttagctcgc actttcacgc
    25261 gaccacgtcc tgtgcgataa gcttctataa tacctttttt accataaatt attccacctg
    25321 ttggaaaatc tggacctttg ataaactgca taatctcttc taggcttgca tctttattat
    25381 caagcaaata taaaagtcca tctatcaact catttaaact atgaggtggg atgtttgtcg
    25441 ccatacctac agctatacca cttgaaccat ttaataataa atttggaacc ctagaaggta
    25501 aaacatcagg ttcgctttct gaaccatcat aatttggaac aaaatcgacc gtatctttat
    25561 ctatatcttt taaaagctca tgagaaagtt tactcatttt tgcttcagta taacgcatcg
    25621 cagcggcact atcaccatct atagatccaa agttgccttg tcctgtaata cttggatatc
    25681 tcatagaaaa atcttgagcc attctaacca aagcatcata aactgctgta tctccatgtg
    25741 ggtgataacg acctataaca gcacccacta tacgggctga tttgacaaaa tctgttctac
    25801 tttttgcctc atcattttgc atagcatata aaattcttct atgaacaggc tttaaaccat
    25861 ctcttgcgtc aggcaaagca cgacctataa taacactcat agaatagtct aaataactac
    25921 tttttataga attttctata tctacaagtt caatatcaga atctttgcta aaaatattct
    25981 ccataaaaat ccttctatta gttcaaagtt ttgattatag catattaaac ttttgtatca
    26041 gctaaaacaa gagcaaaaag tacagaaatt ttattttctt ctaaaacttt tttagcttcc
    26101 aaaaggctag aaccagttgt tacaatatca tctactaaaa ttacaggttc gtgaatggtt
    26161 tttaagagtt tgtaatttct tttatgtttt tgacgaaatt ctaaactttt tccagaatat
    26221 ttcacagaat tttgtgcttt taaaacatta aaaacaggtt ttacaaattt tgttttaaga
    26281 tatctagcta aaatagcaga atgtgaataa agcatatctt caaccttatc atctaaagct
    26341 ataacattaa ttgtcattct aggatcaaaa aaatctttaa attttgcaaa acttaattta
    26401 gcaagcattt tataaacaaa ataaccataa aaataatgtt tagagtgaag caagtgttgt
    26461 atttcatggt atttataaaa agaataaact ttgaaattat tatcaagctt tcttacattt
    26521 aaggaaaatt cagaaagctc tagctcacat aaatcacaaa agcagagcag agcaaaagct
    26581 ccgcaattta tacacctcaa agttcagaga ttaaactagc tgctttattt gccatttgtt
    26641 ttattaacaa atgagtataa aaagttgttt cttttagatc atcaaaacct tgtacatctt
    26701 gcttggtgcg gattgtaaat ttcttatttt tgtttatatc gctaacttgt aaaactccta
    26761 ctagttttga atgtaatcct gtagcatctt gagttgctcc ataagatata aattctaaat
    26821 caatcttact cacataaggt gaattttgat cgttattgtc aagcacaact attcctctag
    26881 cttcaagttc ttgctttaaa taagtataaa ataccgcatt aaaattcaca tcaacaaata
    26941 actttttccc tttagcattt aaaacttttt gcccttcttt taaatcataa aatctatgca
    27001 aataaacctt ttttaaagca ataccagtgt ctaaagtgcg tttattggca caacattgaa
    27061 ttccaacatc gctaatgtat aaaagccctt taatctttgc ttcaaagcca tcaggacttt
    27121 cacaagaact gcattgagaa tttttagaaa tttgattaac ttgagcaaaa gtatcttgtt
    27181 tagttgcaca agcactcaaa aataaaatag gcactataaa aatcaaaaat tttttaaaca
    27241 ttttttctcc ttagaaaatt attttaaaat tgtattaaaa atacaagcaa atttcaagcc
    27301 aagttttaaa tttatcatca atctatcttt aaaacactca aaaaagcctc ttgaggtaaa
    27361 tttaccttac ctatagcttt cattcttttt ttaccttctt tttgcttttc taaaagcttt
    27421 ctttttctag taatatcccc accataacat tttgctgtca catttttacc catggattta
    27481 acggtttccc ttgcgatgat tttatttcca atacttgctt gaatggccac ttcaaaaagc
    27541 tgtctaggaa ttatttcttt catagcacta acaagctctc ttcctttact ttgtgctttt
    27601 tcattaggca cgataatgct taaggcatca acattttcac ccgccacttt aatatcaagt
    27661 tttaccaaat cccctactct aaattctata ggctcataat caaaactcgc atagcctttt
    27721 gttaaggact ttaatttatc ataaaaatcc atcacaatct catttaaagg cacatcatat
    27781 tctagcaaaa cgcgctcagg tgtgatatag tccattttaa cctgtactcc tcttttgcga
    27841 tttaaaagag tgattaaatt ccctaaaaat tcacttggag taatgatagt ggctttaaca
    27901 taaggctctt ttatatgatc gattttatta acaggaggaa gctcgctagg attttgaatt
    27961 ttaacaagct ctccatcggt ttgataaatt tcataagtca cagttggagc tgtagcaatc
    28021 aaatcaagat taaattctct ctcaagcctt tctttaatca cttccatatg taaaagtcct
    28081 aaaaacccta ccctaaagcc aaagcctaaa gccaaagaag tttcaggctc ataagtaata
    28141 gaactatcgt taagctttag cttatccaaa gcatctctta aatcttcaaa tttatccgtt
    28201 tctatgggat aaagtcctgc gaacacaaaa gctttagcct tttcaaaacc ccctatagct
    28261 tctttagctt tattttttac taaagtaata gtatcgccta cttgtacatc acctacggtt
    28321 ttaagcccta aaaccaccac gcctacttca cctgattgta aagattgagt tttaattgga
    28381 cttaaaggat gaggataaaa aagatcttga attatatgtt ttttatccgt actcatgact
    28441 aaaacttcat cgtttttagc tatacttcct tcataaatcc taaccaaagc caaagcacct
    28501 aaataattat caaaccaaga atcataaatt aaagccttag taggagcttc atcatctgtt
    28561 tttggtgcag ggattttagt aataattgtt tctataagct cttttatacc cactcctgtt
    28621 tttgcactca cgcaaattgc atctttgcaa tctataccta taatatgctc gatttcatgc
    28681 tttacttttt caacatcagc attaggtaaa tcgattttat taattacagg aatgatttca
    28741 agattatttt caagtgctat ataaacatta gctatagtct gtgcttcaac accttgagaa
    28801 gcatctacta caagcaaagc cccttcacaa cttgccaaag aacgactcac ttcataagaa
    28861 aaatctacat gaccaggagt atcaataaga tttaaaacaa aattttcatt attaaattta
    28921 taatttaaac gcactgattg tgcttttatg gtgataccac gctctttttc tatatccata
    28981 gtatccataa cttgcgaact catctgccta tcgctaatag caccacactc actaataatc
    29041 ctatctgcaa gagtagattt tccatgatct atatgagcta ta
//
LOCUS       DAPIWB010000013        28966 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.013, whole genome shotgun sequence.
ACCESSION   DAPIWB010000013 DAPIWB010000000
VERSION     DAPIWB010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 28966)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28966)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28966
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.013"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            67..1341
                     /gene="cmeD"
                     /locus_tag="RJ266_000472"
     CDS             67..1341
                     /gene="cmeD"
                     /locus_tag="RJ266_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter outer membrane
                     subunit CmeD"
                     /protein_id="HDV7354250.1"
                     /translation="MFEKYLKSAMFLALYPLAMLASNLHEFIALSQNNESYLIKQMQS
                     EQANLDKEQAFRNYLPSLSLNSAYVANNKDRFIIDPQESLFAKVSLNFLLFDGGTREA
                     NLRALESKEKLSLLDKEQSKNYLALNAITLYFNTLSLKKILLANQQKVAFLKSTFERL
                     QKFYDAGLSPKDELESIKAKYHLSLLELSQNELKLANIQKEIKILSDTDFKVQGNAFL
                     ENPQQEKSQNYEVMIAKEQINLAKESVNLAKAEYFPKFYIQDNFNFYKNNYNPKVPVP
                     FVNLADQFLEKYSQGNQFILGMEWKIFDFNARAKEVEKERLNVQIANANARFSERKNK
                     EELNYLDKSLKVLQEQILALNLSLNAANLAFESVDKKYQAGLVSYVEYLQALEAKFKA
                     QSDLELAKNEFEITKANYYFNAGIDLNSKVKE"
     gene            1338..2078
                     /gene="cmeE"
                     /locus_tag="RJ266_000473"
     CDS             1338..2078
                     /gene="cmeE"
                     /locus_tag="RJ266_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit CmeE"
                     /protein_id="HDV7354251.1"
                     /translation="MKKIIFLLLAFNYAFGEEIYASFNVEASKQSKLALESIGLVQKI
                     PVEIGQKVSKGELLLALDQESEKIALQNAQNSYQLALVEYENTKSRMQKIKAVENVID
                     KQSYEDMKAKFDAANLNLIKAKINIAYYKNIMAKKELRAPYDAIIANKFIQVGEGVGG
                     VAQPLIEIFSYPQSKLILSFDEKYKDKVRLGDDFFYKIDQNGTELKGKISLIYPSIEV
                     KTRKIYAEVQTTNLTPGLFGEGRIITKD"
     gene            2081..5098
                     /gene="cmeF"
                     /locus_tag="RJ266_000474"
     CDS             2081..5098
                     /gene="cmeF"
                     /locus_tag="RJ266_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit CmeF"
                     /protein_id="HDV7354252.1"
                     /translation="MFKLAINRPITVLMFFLALMIFGLISAFSMSVNLFPNVSIPLIK
                     ITSKINGDLNFVESKVTKEIENALSEIDGVKTITSAAYDNFSVSVVEFKLGKNLEVAA
                     NDVRDKIGTLSLPSKPEIEKISSDSGSAISLFLYSKDKLQLMREINDKIKPFLQRVEG
                     VGKIEAKGFLEPQIRIELKPNELRKYNLNALDVANIIKSQNFKQALGELNNNQDNYII
                     KGYFEATNLEELSNLRIKTGVFLSDIANISSLYEDEKQSALYEGKEGVLLELGKITNY
                     NTLEMIKNVKNALPILEKQIPKDISINVLYDKSLNIQKHLSQVIFDMVLGIFLTLVIV
                     FLFLRNLSATLIACIAIPTSIISTFFIIDLLGYDLNRLTFIALTLSIGIFIDDAIVVI
                     ENIAKKLKTYPPLQAAFLGINEIGFSVLSISIVLLCVFIPISYMNSISGLFFNALGIS
                     VASGIVISFLVSVFLIPSIGARFLNPKENKFYEKTEAFFEKIEQKYENLLYKILQNKV
                     KFILATLVFIGLSFALATRIGLDFLPMEDDSEIQVLLESKKDLSLEAMKEKSLNLLEK
                     IKNDSNVKYAFLLVGYDDAKDATKAKIYVKLKNLDERNLRQTAIVSLYRQKFQDESLK
                     IKILELPKIEGAGIDDPVQFLILGDDLNTLKEAASQAKEILGTNARIVDISDNANATK
                     DEVALHINKEKAKLLDVNPQYIAGVLGYSFSQLSVGSMDRGNSKDDIILSFAPEFKKD
                     IEALKRISIKNNQGINLELSSVVDFIYSKDLKTINRYNKNRSVKITAGVNDLSLGAVQ
                     KLLLDNMDKILNNNPSLSYAFSGFINLLGETVQGFAMAVALAFVLIYLVLAALYESFI
                     LPLIIMITMPLAFGGASIGLFITGHNFSLFVLIAIILLFGMVGKNAILLVDVANKKCH
                     EGLDPDKALLNAGKSRLRAILMTTFAMIFAMLPLALSRGAGYEANSPMAIAIIFGLIS
                     STLLTLLVVPALFKFCFKLDSKLRKIYEREKLN"
     gene            complement(5122..5928)
                     /locus_tag="RJ266_000475"
     CDS             complement(5122..5928)
                     /locus_tag="RJ266_000475"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDV7354253.1"
                     /translation="MQIVQTLETINVNTDDISVFQYFKDLITKNFTKVIGRKNKIFSF
                     FEENEIPQRRYFLKVLDQKYRKSTNEGIENLQDAHFKTFRLIFEQNNMLKPMLFIKID
                     FVAGRILMKLSSNEKLFITYIRNYFQDHNIEYNEMTNILILEYKNENTLELFEAFADE
                     SEHLKYCVNFEVDREEYKKFRQNIHNKENMKWKFNALAKLFSNYFNTLECTPQNDLSE
                     IRQKYLILVKLYHPDFHQGKSAIEKAYAREQFEKIQIAYDNLKALYKNNT"
     gene            complement(5929..6648)
                     /locus_tag="RJ266_000476"
     CDS             complement(5929..6648)
                     /locus_tag="RJ266_000476"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HDV7354254.1"
                     /translation="MLEIGFCTLEDQCPYLKDKRSRIEYKYIENCPKEINNELIKRGW
                     RRFGRYFSRPICKDCDECLSLRILVNEYNFSRSERRVVNKNINTKVILRTPNLSNEHL
                     FLYDKYHRFMEEKKNWKRYDLSFKQYYNLYVDGFMNFGYELAFYIEDKLVCVDLIDIL
                     EDGISSIYCFYDPDFSYFSLGKFSLLNEIQIAKKMNLDYIYLGYFVKKCQSLSYKADY
                     TPNEILKGTKELFENEVLWEK"
     gene            complement(6648..6899)
                     /locus_tag="RJ266_000477"
     CDS             complement(6648..6899)
                     /locus_tag="RJ266_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354255.1"
                     /translation="MDFLDSLKSIKKEMQANTNTSKLAKKSSKSGASVKNLEKLAKDI
                     REKNQETNIDKEMQEIFLKQEKLQDEFSEFIKNTDIKKI"
     gene            complement(6903..8348)
                     /locus_tag="RJ266_000478"
     CDS             complement(6903..8348)
                     /locus_tag="RJ266_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase subunit A"
                     /protein_id="HDV7354256.1"
                     /translation="MNQIHKILIANRAEIAVRVIRACRDLHIKSVAVFTEPDRECLHV
                     KIADEAYRIGTDAIRGYLDVARIVEIAKACGADAIHPGYGFLSENYEFAKACEDAGII
                     FIGPKSEVIHKMGNKNIARKLMAKNGIPIVPGTEKLNSYSMEEIKIFAEKIGYPVILK
                     ASGGGGGRGIRVVHKEQDLENAFESCKREALTYFNNDEVFMEKYVVNPRHIEFQILGD
                     NYGNIIHLCERDCSIQRRHQKVIEIAPCPGISDNLRKTMGVTAVAAAKAVGYTNAGTI
                     EFLLDDYNRFYFMEMNTRIQVEHPITEEITGIDLIVRQIRIAAGEILDLEQSDIKPRG
                     FAIEARITAENVWKNFIPSPGKIGEYYPALGPSVRVDSHIYKDYTVPPYYDSMLAKLI
                     IKATSYDLAVNKLERALKEFVIDDIRTTIPFLIAITKTREFRRGYLDTSFIETHMQEL
                     LEKTEDRHQENKEEVIAAIAATLKKIRESRE"
     gene            8488..9651
                     /gene="ftsW"
                     /locus_tag="RJ266_000479"
     CDS             8488..9651
                     /gene="ftsW"
                     /locus_tag="RJ266_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HDV7354257.1"
                     /translation="MVADKRLFYLSCILITIGIVFSYSLTAFTVLFLDYSEFHFFIRQ
                     LFFGISGILIMFFISRLDPDKALSKKIILAILIISFIFIIILPFLPSALATASGGAKR
                     WIRLGPLSISPVEFFKIGLIYFLAWSYTRRIDDSKKAIRHEALILLPYCILASIVIGY
                     IYITQNDLGQSVISFFLILALAFFAGASKRLFAFGTLIIMMIGIMVIFSNQRRIQRIA
                     SWWGNIQDAFLPMLPDWLANALRVSSNSEPYQISHSLNAIAHGGMFGEGLGLGTFKLG
                     FLSEVHTDFVLSGITEEIGLLGLGVICYIYLWMILRIFRIAGRCEAKQDFIFCSGIAL
                     LLLFSFFMNAFGIISLTPLKGVAVPLLSYGGSSMWAICIGIGYVLMISKKVKL"
     gene            9648..10676
                     /gene="murG"
                     /locus_tag="RJ266_000480"
     CDS             9648..10676
                     /gene="murG"
                     /locus_tag="RJ266_000480"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HDV7354258.1"
                     /translation="MTIALTGGGTGGHLAIVRCLLESAIKKNIECVYIGSQNGQDKAW
                     FENEVRFKEKFFLSSKGVVNQSKFDKISSLLHTLKLSKDCREIFKKYHIQAVFSVGGY
                     SAAPASFAALFSHLPLFIHEQNSKSGSLNMLLKPFATKFFSAFEKEISPYPVADKFFD
                     NARIRKELKNIIFLGGSQGAQFINELALNLAPKLQEQNIKIIHQCGKNDFEKCKKHYQ
                     SLNIQADIFDFSLNLEEKMKNADLAISRAGASTLFELCANTLPTIFIPYPYAAKNHQY
                     FNAKFLQDQALCQIFMQNSINLDEFFKSILKLNLENISTRLQNITQKNGADMLIQKAL
                     FDNLTFIR"
     gene            complement(10647..11810)
                     /locus_tag="RJ266_000481"
     CDS             complement(10647..11810)
                     /locus_tag="RJ266_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CynX/NimT family MFS transporter"
                     /protein_id="HDV7354259.1"
                     /translation="MASFKKIFWINVTIVIIVAFNLRAPITAVGPIIDIIKDKYYLNS
                     TVAGILTSLPLIAFGSISFIVGYFSPIRAIVFGIFLIFLGEIIRSYFGVYGLFLGMLA
                     MGCGIAIANVLLPSFIKEKFPKKMASIMGIYSLVLSISSIMGIALAIPLLSVFDLAGA
                     MFFWAIFSFVALVVYYPQAKNGRFFRIKKKTHKKINLFTNLTTWKITLFMGFQSFLAY
                     SLFFWYVQIVVEKGFDKEFSTSMVLFAQLVAAPVSLFGPLLLGKLRQNLHTFYIAGLC
                     SMYVIAFGMLFIFDSKISIIISAFIMGFPWGGVFGIALLFIAQKSSNAQIAARLSALA
                     QGFGYLIAAQGQWIIGFLHDKFENFSFAILMLVFVGILVNIFGYLSYKSQIIK"
     gene            complement(11818..12669)
                     /locus_tag="RJ266_000482"
     CDS             complement(11818..12669)
                     /locus_tag="RJ266_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7354260.1"
                     /translation="MKKYVLSLALLGSLLGASELKYQEFDGFKSPESIFVDKNYVYVS
                     NVGEKLEPLAKDNDGFISKLDKNGKVLEYKFLTHLNAPKGMMEIGKTLYVVDIDVLRG
                     FDLKTKKEIFNLPIKGAIFLNDIEKLDDNTLLVSDTGTGLILKVDLKTKQYDELLKLD
                     LAKFGGPNGLYLDRKKHKLFIAGYHPDGVSGGVVMAYDLNTKELSIIKNEKESYDGIV
                     PYKDGLLVSSWGNNLNGYIYNLDNVKSVKLELPLMKGPADIFIEGNILWIPKMVEGKI
                     FKVELNK"
     gene            complement(12732..13622)
                     /locus_tag="RJ266_000483"
     CDS             complement(12732..13622)
                     /locus_tag="RJ266_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV7354261.1"
                     /translation="MNKILSLPEDLKQLKGVNYKKIKSCTFAKYTQTDTSHSTFVNVG
                     SHLLTFVRKGYKILHTASKDYKINSYETLFLKAGSYTLSNVGLSKGVYEAYLFFFDNA
                     FLIELIYKYKDFFKLDQKFQNYEIFWVKNDKILQGILESFSPHFEENTQILDPIVSLK
                     FEEIFLHLLLNKNIYFISFLSGILKEFRLDLSQLFEYCGREFLSVNEMSNFAKLDLAT
                     FSKEFKKCFGQSPKKWLDEKRLQKAKILLKFSKKNINEIANECAFSSVAWFIERFKEK
                     YEQTPKQYQKTKNLYFLSKN"
     gene            complement(13619..14224)
                     /locus_tag="RJ266_000484"
     CDS             complement(13619..14224)
                     /locus_tag="RJ266_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDV7354262.1"
                     /translation="MWDKKIIAISDRKCVEIDFLKQIEKLAKAKVDAIVLREKDLSEF
                     EYYDLAKEVLSICAKQKVTCFLHFFDRECLKLGHRYFHAPLSLLRKEPKLTKYFHILG
                     TSVHSKEELLEAMSYKVNYAFVGHIFESSCKMGLEPKGIDFLKSLLEFSQIPLYAIGG
                     INAQNIENFKDINVVGVCMREILMKEKDLKKYLLECRQNLR"
     gene            complement(14214..15359)
                     /gene="thiH"
                     /locus_tag="RJ266_000485"
     CDS             complement(14214..15359)
                     /gene="thiH"
                     /locus_tag="RJ266_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminoacetate synthase ThiH"
                     /protein_id="HDV7354263.1"
                     /translation="MQDYMQYLPHMQEIKSEILNKVLTQVQSYDESQFSAKDVKNALN
                     QTHLSIEHLKALLSSAAEDFIEELAFKSAKVKQKYFGNSISLFTPLYLSNYCNSKCVY
                     CGFQKGNKIARAKLNEAEIHEEMQAIAKSGLEEILMLTGEGREFASVEYIANACKIAR
                     EYFKVVGVEIYPMNEDEYKILHEKGCDYVTVFQETYNPLKYSKIHLAGEKRIFPYRFN
                     AQERALKAGMRGVAFAALLGIDDFRKDALATALHAHFLQQAYSHAEISISVPRLRPII
                     NNAKIHPKDVSEKRLLQVLCAYRLFLPFAGITISSRERIGFRDEVIKLGATKMSAGVS
                     VGIGEHKGEKKGDEQFEISDDRSVDEILAMLKRSNLQAVMSDSIYVG"
     gene            complement(15362..16138)
                     /locus_tag="RJ266_000486"
     CDS             complement(15362..16138)
                     /locus_tag="RJ266_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HDV7354264.1"
                     /translation="MQENLKNDKLKIGKYEFDSRFILGSGKYSLELIKSAIEEAKAQI
                     ITLALRRANTGEIANILDYIPKNITLLPNTSGARNADEALRIARLSRELGCGELIKIE
                     VISDSRYLLPDNYETIKACELLAKEGFTPLPYMHADLYAARAMRDAGAAAIMPLAAPI
                     GSNKGLCAKEFIQILLNEIDLPIIVDAGIGSPSQACEAMQMGVSAVMVNTAIAEAKDI
                     ALMARAFSLAVNAGRAAFLAGVASVSEAKASSPLTGFLRD"
     gene            complement(16141..16944)
                     /gene="thiF"
                     /locus_tag="RJ266_000487"
     CDS             complement(16141..16944)
                     /gene="thiF"
                     /locus_tag="RJ266_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine biosynthesis protein ThiF"
                     /protein_id="HDV7354265.1"
                     /translation="MMRVKFNGKELDTDFKTSLEFFENISKNENDVWIINGFATKENI
                     ALNENDELFCIEKNTLPPKDALDAMMRARHTPKLHDKLKNGRVAVCGLGGLGSHIAIN
                     LARSGVGYLKLIDFDVIEPSNLNRQAYRVSDLGKFKTEALKEQISEINPYISVEICTL
                     KIDEDNLESLFKDIDIVCEAFDSAIAKAMIAQNFHRFYKDGILICASGLAGYGDSNSI
                     QTRKIAKNFYVCGDLVNGAKLGNGLMAPRVNICAGHQSNLVLELLANKE"
     gene            complement(16941..17132)
                     /gene="thiS"
                     /locus_tag="RJ266_000488"
     CDS             complement(16941..17132)
                     /gene="thiS"
                     /locus_tag="RJ266_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HDV7354266.1"
                     /translation="MIINGQKLELKELKFMDFIKEKGFKIELIALELNGEIVPKSEFE
                     NLILKENDKAEIVSFVGGG"
     gene            complement(17142..18239)
                     /gene="dapE"
                     /locus_tag="RJ266_000489"
     CDS             complement(17142..18239)
                     /gene="dapE"
                     /locus_tag="RJ266_000489"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HDV7354267.1"
                     /translation="MNAKEFLIELLKFKSVTPNDDGALNFIAMELSDFEAFFIEKEGI
                     KNLLLTKKFKDEGEHLAFGGHVDVVPAGEGWSSDAFVPMEKEGFIYARGAQDMKSGVA
                     AFVDAAKNVDFKGARLSLILTSDEEGEAIYGTKAVLEWMQERDMLPDYAVVAEPTCVK
                     KIGDSIKIGRRGSINGKLLIRGKQGHVAYPEKCINPVHDFAPVLKLLAGFDLDPGSAE
                     FSPSKIVITDIRGGMGVCNVTPNDLKLMFNVRNSPDTSLEDVKNYVEKICHGLNYELE
                     LKQSSEAFLTNIDNKIVQKMNESVQKITHEVPELNTKGGTSDARYFAKYGVKVVEFGV
                     CNDRIHAIDERVSIEEFEKLCLVFKDLIENF"
     gene            complement(18243..18842)
                     /locus_tag="RJ266_000490"
     CDS             complement(18243..18842)
                     /locus_tag="RJ266_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HDV7354268.1"
                     /translation="MFDSFLSGVFLGFGVSVPFGPVNILILTYALKAFKNSIAVGLGA
                     FSIDMLYLFLLQFGLLNFLGNVIFMRSLAIFGFCFLTYMAYLMLRKKKESLNLEHKEF
                     KESLLKSYIKGAFLNGSNPFVIGFWLSAASVVLSSDHAYLMTLGLVVAILFWVSALAF
                     VVARYSHVFSAKVVFIINIISAIIIEYFALNLLYKTFLG"
     gene            complement(18835..19536)
                     /locus_tag="RJ266_000491"
     CDS             complement(18835..19536)
                     /locus_tag="RJ266_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacetylase"
                     /protein_id="HDV7354269.1"
                     /translation="MKNIMILSGAGLSAPSGLKTFRDNDGLWEEYDVMEVCSATGFRK
                     NPKKVLDFYDARRAQLQNVKPNHAHEKIAQLKEKWGKNLFVITQNVDDLLERAGCKDV
                     VHLHGFLSELRCLKCEEIFNIGYEKITDKQCPKCKSKDLRHNIVMFEEQAPAYATLYS
                     LLNQTSLFISVGTSGAVLPVGRYASMCEKSILNIYEKDANLEWYFDKIYIEDIISAID
                     KIALDIENFMKDGNV"
     gene            complement(19579..23388)
                     /locus_tag="RJ266_000492"
     CDS             complement(19579..23388)
                     /locus_tag="RJ266_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDV7354270.1"
                     /translation="MITKDNLKQVLENLGFKNKNENYVKTINNYTLLIDYKNQSINYP
                     KEIKIHDKTTSNFSHPENFVVFECVHRLLEKGYKAEHLELEPKWNLGRDKKGGKADIL
                     VKDNENNPYLIIECKTTDSKNSEFIKEWNRMQEDGGQLFSYFQQEKGVKYLCLYTSDF
                     SDKLEYKNYIIQAYDNEEYLKEKELQNSYKKSNNNIELFKTWKESYELQYFKQGIFEA
                     NVNAYKILEITPTFDNLKELKEEGKYHEFAKILRKYNISGKENAFDKLVNIFLCKIYD
                     ETFNKNNLKFGYFGVMADTYANMQDRLMWLYKEAMKEFLGEKITFVSNEDIEKDFKQL
                     KIKTLKEVMQNYIKELKFYSNNDFAFLEVHNKELFLKNALVLKEIVELFANYKLTQNS
                     TNQFLGNLFELFLQKGMKQDEGQFFTPIQICEFIMYSLPLHEMLSKNSKALRVIDYAC
                     GAGHFLNTYANELKRYLTEDELKEHYKNIYGIEKEYRLSKVSKVSSAMYGQNEINILY
                     ADALASFELANTNNLEGEKAKPQIESNSFDLLIANPPYSVKGFLETLSDKSKNTYKLF
                     NDDINIETNNSIECFFCERANQILNDNAKAAIILPSSILNKDSIYKNTREILFQNFDF
                     IAIVELGNQTFGATGTNTIILFLRKKETFKQENHLISQDYSLIKERIEAENLKDNESF
                     YQNYLSAYCDFRKFDKELYSNFLNGNLDSKLTELEAFKDYRNAFRQTSDYKKLKESKI
                     YKESEDKQSLEDKAFLAYAQAIEKDKLLYFSLSLNQEVLIIKSPSDIKEQKKFLGYEW
                     SNRKGDEGLKELHEPYLSPLFERGNPQNETKLNTLICKAFLKTLSDIPKDLQGYASKA
                     RLIDMMDFEKVEFNKAISLNPSNSMQSEMSNPFANSKYELVRLVEIENIKIQKGQNIT
                     QKLAKIGNIKVVAGGKDYAYFHNDFNRNENTITISASGANAGYVNFWKEKIFASDCTT
                     INLPNLKVIQFIYYVLKCNQKYIMSLARGAAQPHVYPKDIENIKIPLPPLEIQKQIVA
                     ECEKVEEQYNTLSLSIKEYQNLIKAMLQKCGIIEDNQEYELNSILDKINNLCKINLDS
                     EFLSSFNKTIKEYALSNPIFKLSIGKRVLNNELLENGQIPVYSANVLEVFGFVNKEIL
                     QDYDNDSVLWGIDGDWMVGFIPKNKKFYPTDHCGVLRVDDTKINAKYISFILNEAGKK
                     QGFSRKLRASIDRIKALRVKLPSLEFQDQIADITDKIEKKINEYKIELDRLEKEKEKI
                     LQKYLFS"
     gene            complement(23397..25607)
                     /locus_tag="RJ266_000493"
     CDS             complement(23397..25607)
                     /locus_tag="RJ266_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HDV7354271.1"
                     /translation="MMNDTKEELISKLDLNSYLEEFKALFARDKEIFLQGDSNLHFKR
                     IHELCEVEFPTMPELSNLDKALVHLSKQGILHLDEIFEFVKIFRYFEKLKKIKLGTNL
                     DSWLQKIEFVSGALELCLNFDEKGELKESLDERLVNLNAALRLKNESIIAEFKKFCYT
                     KALIPYLIDTQIHLINNLEALLVRGGFNHAIKAKIIGRSSGGGFYIVPLSVENLQNDI
                     EKIKNQKEEIYYEYAKNFSAFLAKNLPFLKFINTAFDLFDHYSARVLLAKKRDFEFVL
                     CDQSTDLVLKNFAHPALKNPKSVSLEFKKQVLIITGVNAGGKSMLLKSMLSAAFLAKH
                     LLPMHIKASESKIGAFKEFDAIIEDPQNVKNDISTFAGRMLHFSRLFSKKNLLLGIDE
                     IELGTDFEEAACLYSVLISKLIANNLKIIITTHHKRLAMLLAKNEQVELIAALYNEEL
                     SRPKYEFLKGTIGKSYAFETALRYQIPPNLVSEAKKLYGEDKENLEELVGKNINLELE
                     LKAKLENVEKKEQKVDEILLSLKDQKEKNEQEFRTSLRNLEFKFHKAIEEAKKTIQLK
                     DIKDKQRSLNKANELKKEIILPSMEQNEELRVGDFVKYEKIKGKIISISKNDAMVESD
                     GIKLRVPLKLLKKSGAMPKKVAKTSISISKPSNLSVTLDLHGLRSDEAISRLDKFISD
                     ALLAGFDEVLVYHGIGTGKLAFAVREFLKTHKSVKGFNDAPINQGGFGAKVVRL"
     gene            complement(25597..25947)
                     /locus_tag="RJ266_000494"
     CDS             complement(25597..25947)
                     /locus_tag="RJ266_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354272.1"
                     /translation="MSRFFLYLLIILILALITFALREKLGKKTKPFFGILLVIFIVLA
                     VFFEFENTQKSHLRTDIIVAFNQNKNILCKDINVSKAYFNYEFGTGSFISKDNNQSFN
                     SLIIDIKDCRLNDE"
     gene            complement(25940..27238)
                     /locus_tag="RJ266_000495"
     CDS             complement(25940..27238)
                     /locus_tag="RJ266_000495"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HDV7354273.1"
                     /translation="MMQNIHFIGIGGIGISALARFLKEKGFKISGSDLKESKITKELE
                     KEGVKVSIPHHKDNILNKDLVIYSAAIKEENPEFKYAKELGIKCLSRKEALPLILEDK
                     RVFAVAGAHGKSTTSSILASLINDASVIIGAILKEFGSNMIYKESQNLVFEADESDSS
                     FLNSNPYLAIVTNAEAEHLDHYGNEVSKLHHAYTEFLDTAKIRVINAEDEFLKNYKNE
                     SIKLYPSKDIKNCTMCIENFKPFTSFELKDLGEFKVFGMGYHLALDASLAILAALNFL
                     DIETIRTRLKNYQGIKKRFDILHADENLVLIDDYGHHPTEIKATLSAAQEYARLGGYK
                     KITAIFEPHRYTRLAANLKEFAKAFEGVDELIILPVYAAGEEPIELDLKVVFPKALFV
                     EDIKREGKFLVASKGQVFEEGLIIGFGAGDISNKLRQKNE"
     gene            complement(27302..28810)
                     /locus_tag="RJ266_000496"
     CDS             complement(27302..28810)
                     /locus_tag="RJ266_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002844947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HDV7354274.1"
                     /translation="MLIFGVFVFFLNLKILNLKLKPVNLRLFPLIALNLILIIVYVIA
                     LRGPFKHVAINVQNYSFSEYSVVNDTMLNPIMAFSWALKQYKEEAALKAITPLKAQEL
                     KEKLFDYLHQSPINLKAEKNHPSVFVNLMESFGLNLADFTNTEHNFLGSLDKHFKQDF
                     LFKRFLSSSNGTIPSFANLFFVSPFSNISTSKFQKTYLDLTPIAVYKKAGYKVIFVSA
                     GNGSWQNIKNYLSILGVDEIIDENILMKEYNGAKDSENGYGVADEFLYKKVYDLLQKN
                     PHNILIIALTMSNHPPYKIPQNDLPKLQNIPQTLLNMLPYEKDKQDNIIKAYTYANNE
                     FGKFLDKVKQSSFKDNVIIAATGDHRVREMSMDLNSQKAFAYSVPFYLYIPKDLQDNI
                     YYDKDRVGSHKDIFPTLYALSLNNVKYLSVGGRNMLARPNDEKLEFGINDAVWIDKKG
                     IYSGGKGYYFESNDTLKDMNKAFNLDDYTKDFDKFYRELNLYQLAERLGISK"
BASE COUNT         9850 a         5016 c         3771 g        10329 t
ORIGIN      
        1 caaataaatt ttattttata taaaaaactt caattgaaat ttatataaag catactaaaa
       61 tatcaaatgt ttgaaaaata tttaaaatca gctatgtttt tagctcttta tcccttagca
      121 atgttagctt ctaatttgca cgaatttata gcactaagtc aaaataacga atcctatctc
      181 attaaacaaa tgcaaagcga acaagcaaat ttggacaaag aacaagcttt tagaaattac
      241 ctaccctctc ttagtctaaa ctcagcttat gtagccaaca ataaagatcg cttcattatc
      301 gatccacaag aaagtttatt tgctaaagtt tctcttaatt ttttactttt tgatgggggt
      361 actagagagg ctaatttaag agctttagaa agcaaagaaa aattaagcct tttagacaaa
      421 gaacaaagca aaaattacct tgccttaaat gcaatcacac tttattttaa caccctaagt
      481 cttaaaaaaa ttttactagc aaatcaacaa aaagtagctt ttttaaaatc aacttttgaa
      541 agattgcaaa aattttacga cgcaggactt agccctaaag atgaacttga aagcattaaa
      601 gctaaatacc atttaagctt attagaactc agtcaaaatg aattaaaact tgccaatata
      661 caaaaagaga ttaaaatttt aagtgataca gattttaaag tgcaagggaa tgctttttta
      721 gaaaatccgc aacaagaaaa aagtcaaaac tatgaagtaa tgatagctaa agaacaaatc
      781 aatcttgcta aagaaagtgt aaatttagca aaagctgaat attttccaaa attttatatt
      841 caagataatt ttaactttta taaaaacaat tataatccaa aagttccagt tccttttgta
      901 aacttagcag atcaattctt agaaaaatat tctcaaggta atcagtttat tttaggtatg
      961 gaatggaaaa tttttgattt caatgcaagg gctaaagaag ttgaaaaaga gcgtttaaac
     1021 gttcaaatag ccaatgcaaa cgcaagattt agtgagagaa aaaataaaga agaattaaat
     1081 tatttagaca aaagtttaaa agttttacaa gaacaaattt tagctcttaa tcttagctta
     1141 aatgctgcaa atttggcttt tgaaagtgta gataaaaaat accaagcagg acttgtttct
     1201 tatgtggaat atcttcaagc tttagaggct aaatttaaag cacaaagcga tttagagctt
     1261 gctaaaaatg aatttgaaat tactaaagca aattattatt ttaatgcggg tatagatctt
     1321 aattcaaagg ttaaagaatg aaaaaaatta tatttttact tcttgctttt aattacgcct
     1381 ttggcgaaga aatttacgcg agtttcaatg tagaagcatc aaaacaaagc aagcttgccc
     1441 ttgaaagcat aggtttagtt caaaaaattc ctgtagaaat tggacaaaaa gtcagcaaag
     1501 gagaactttt acttgctctt gatcaagaaa gtgaaaaaat agctcttcaa aatgctcaaa
     1561 attcttatca acttgccctt gtagaatacg aaaataccaa aagcagaatg caaaaaatca
     1621 aagctgtaga aaatgttata gacaaacaaa gctatgaaga tatgaaagct aaatttgatg
     1681 cagctaattt aaatttaatc aaagcaaaaa tcaatatagc ttattataaa aatatcatgg
     1741 caaaaaaaga attgcgtgca ccttatgatg ctattatcgc aaacaaattt atacaagtgg
     1801 gcgaaggagt aggaggagta gctcaacctt taatagaaat tttttcctat ccacaaagca
     1861 aactgatttt aagttttgat gaaaaatata aagataaagt tagattaggc gatgatttct
     1921 tttataaaat cgatcaaaat ggtacagaat tgaaaggaaa aatcagcctt atttatccaa
     1981 gtatagaagt aaaaacaaga aaaatttatg ctgaagtgca aaccacaaat ctaacaccag
     2041 ggctttttgg tgaaggtaga atcatcacta aagattaaaa atgtttaaac tagctataaa
     2101 ccgacctatt accgtgctaa tgtttttctt agctcttatg atttttgggc taatctctgc
     2161 ttttagcatg agtgtaaatt tatttcctaa tgtttccata cctcttataa aaatcacaag
     2221 caagataaat ggggatttaa atttcgtaga atcaaaagtc actaaagaaa tagaaaatgc
     2281 tttaagtgaa atcgatggag taaagaccat aacctcagct gcgtatgata attttagtgt
     2341 gagtgtagtg gagtttaaac tgggtaaaaa tcttgaagta gctgctaatg atgtgcgtga
     2401 taaaatagga actttaagcc taccttctaa gcctgaaatt gaaaaaatca gttcagattc
     2461 tggttctgct atttcgcttt ttttatattc taaagataaa ttacaactca tgcgtgaaat
     2521 caatgacaaa ataaaacctt ttttgcaaag agttgaagga gtaggcaaaa tcgaagctaa
     2581 ggggttttta gaacctcaaa ttcgcataga attaaaacca aatgaactta gaaaatacaa
     2641 tcttaacgcc cttgatgtag caaatattat caaaagtcaa aattttaaac aagcccttgg
     2701 cgaacttaat aacaatcaag ataactatat catcaaaggc tattttgaag ccacaaattt
     2761 agaagaactt agcaatcttc gcataaaaac aggggtattt ttaagcgata ttgctaatat
     2821 ttcaagcctt tatgaagatg aaaaacaaag tgctttatac gaaggtaaag aaggggtgct
     2881 tttagaactc ggaaaaatca caaattataa tacccttgaa atgattaaaa atgtcaaaaa
     2941 tgccttgcct attttagaaa aacaaattcc aaaagatata agtatcaatg tgctttatga
     3001 taaaagctta aatatccaaa agcacctttc tcaagtgatt tttgatatgg ttttggggat
     3061 ttttctaacc cttgttatcg tgtttttatt tttaagaaat ttaagtgcaa ctctcattgc
     3121 ttgcatagct atacctactt ctatcatttc aacttttttt attatcgatc ttttaggcta
     3181 tgatttaaac cgcttaactt ttatagcttt aaccttaagc ataggaattt ttatcgatga
     3241 tgctatagta gtgattgaaa atattgctaa aaaactaaaa acttatccgc ctttacaagc
     3301 tgctttttta ggtatcaatg aaataggttt tagtgtttta agcataagta tagttttact
     3361 ttgtgttttt atccctattt cttatatgaa ctctatatca gggctttttt tcaatgcctt
     3421 aggcataagc gttgcaagtg ggatagttat aagctttttg gtttctgtat ttttaatacc
     3481 tagtattggg gcaagatttt taaatccaaa agaaaacaag ttttatgaaa aaacagaagc
     3541 tttttttgaa aaaatagagc aaaagtatga aaatttactc tataaaattt tacaaaataa
     3601 agtaaaattt atcctagcca ctcttgtttt tatagggctt tcttttgctt tagccactcg
     3661 catagggctt gattttttac ctatggaaga tgatagtgaa attcaagttt tgcttgaaag
     3721 caaaaaggat ttaagtttag aagccatgaa agaaaaaagt ttaaatttgc ttgaaaaaat
     3781 caaaaatgat agcaatgtca aatacgcttt tttacttgta ggctatgatg atgccaaaga
     3841 tgctacaaag gctaaaattt atgttaaact taaaaattta gacgaaagaa atttaagaca
     3901 aactgccata gtaagtttat atcgtcaaaa atttcaagat gaaagtttaa aaatcaaaat
     3961 tttagaactt ccaaagatag agggtgcagg cattgatgat cccgtgcaat ttttaatctt
     4021 aggagatgat ttaaacactc taaaagaagc tgcttctcag gcaaaagaaa ttttaggcac
     4081 taatgcacgc attgtagata taagtgataa tgctaatgct acaaaagatg aagtagcctt
     4141 acacatcaac aaagaaaaag ccaaactttt agatgtcaat cctcaatata tcgctggggt
     4201 tttagggtat tctttctcgc aacttagcgt aggaagcatg gatagaggca attcaaaaga
     4261 tgatattatc ctaagttttg ctccagaatt taaaaaagac atagaagctt taaagcgcat
     4321 tagcattaaa aacaaccaag gtataaattt agaactttca agcgtggtgg attttatata
     4381 cagtaaagat ttaaaaacta tcaatcgtta caataaaaac cgctctgtga aaatcacagc
     4441 tggagtgaat gatctttcct taggagcggt gcaaaaactt ttactagata atatggataa
     4501 aattttaaat aacaatccaa gtcttagcta tgctttttca ggctttatca atcttttagg
     4561 tgaaaccgtg caaggttttg ctatggcagt agcacttgct tttgttttaa tttatcttgt
     4621 tttagccgca ctttatgaaa gttttattct gcctttaatc atcatgataa ccatgccttt
     4681 agcctttggc ggagcttcta tagggctttt tatcacaggg cataattttt cactttttgt
     4741 acttattgcc atcatcttac tttttggtat ggtggggaaa aatgctattt tactcgtaga
     4801 tgtagctaat aaaaaatgcc atgaaggttt agatcccgat aaagctcttt taaacgctgg
     4861 aaaatcgcgc ttaagggcta tattgatgac aacttttgct atgatttttg ctatgctccc
     4921 acttgctctt tcaaggggtg cgggctatga agctaattct cctatggcaa tagccattat
     4981 ctttggactt ataagttcga ctttgcttac cttactcgta gtacctgcac tttttaaatt
     5041 ttgttttaaa ctagatagca aattaagaaa aatttatgag agagaaaaat taaattaacc
     5101 aaaatgatta atttaatttt tttaagtatt attcttataa agtgctttta agttatcata
     5161 ggcgatttgt attttttcaa actgttctct tgcgtaagct ttttctattg cactttttcc
     5221 ttgatgaaaa tcaggatgat aaagttttac caaaatcaaa tatttttgtc tgatttcact
     5281 aagatcattt tgcggagtgc attctaaagt attaaaataa ttactaaaaa gcttagctaa
     5341 agcattaaat ttccatttca tattttcttt attgtgaata ttttggcgaa attttttata
     5401 ctcttcgcgg tcaacttcaa aattcacgca atattttaaa tgctcgctct catctgcaaa
     5461 agcttcaaaa agttcaaggg tattctcatt tttatattct aaaattagaa tatttgtcat
     5521 ttcattatat tctatattat gatcttgaaa ataatttctt atataagtaa taaataattt
     5581 ttcattagag cttaacttca tcaaaattct acccgcaaca aaatcaatct tgataaacaa
     5641 cataggctta agcatattat tttgctcaaa aattaatcta aaagttttaa aatgagcatc
     5701 ttgtaaattc tctatacctt catttgtgct tttgcgatat ttttgatcta aaacttttaa
     5761 gaaataacgg cgctgtggaa tttcattttc ttcaaaaaaa gaaaaaattt tattttttcg
     5821 tcctatgacc tttgtgaaat ttttggtaat caagtcttta aaatactgaa atacgctaat
     5881 atcatctgta ttaacattga tagtttctaa agtttgcacg atttgcatct atttctccca
     5941 taaaacctca ttttcaaaaa gctctttagt gccttttaaa atttcattgg gtgtataatc
     6001 ggctttataa gataaagatt gacacttttt tacaaaatac ccaagataaa tataatctaa
     6061 gttcattttt ttagctattt gtatttcatt aagcaaagaa aatttaccca aagaaaaata
     6121 cgaaaaatca ggatcataaa aacaataaat gcttgaaatt ccatcctcta aaatatcaat
     6181 caaatcaaca caaacgagct tatcttctat ataaaatgca agctcatatc caaaattcat
     6241 aaaaccatcg acataaagat tataatactg tttaaagctt aaatcataac gcttccagtt
     6301 ctttttttct tccataaaac gatggtattt atcatataaa aacaaatgtt cattgcttaa
     6361 attgggtgtt ctaagtataa ctttggtgtt aatattttta tttacaaccc ttctttcact
     6421 tcttgaaaaa ttatattcat taactaaaat tctaagactt aaacattcat cacaatcttt
     6481 acaaataggg cgtgaaaaat acctaccaaa acgacgccaa cctcgtttta ttagctcatt
     6541 attgatttct ttagggcaat tttcaatgta tttatactct attcttgaac gtttatcctt
     6601 taagtaagga cactgatctt caagagtaca aaaaccaatc tcaagcatta aattttctta
     6661 atatctgtat ttttaataaa ttcggaaaat tcatcctgta gtttttcttg ctttaagaaa
     6721 atttcttgca tttccttatc tatgtttgtt tcttgatttt tttcgcgaat atctttagct
     6781 agtttttcta aattttttac acttgctcca ctcttgcttg atttcttcgc taattttgaa
     6841 gtattggtgt tagcttgcat ttctttttta atacttttaa gactgtctaa aaaatccatc
     6901 tattattccc tactttctcg tattttttta agcgtagcag ctattgcagc tataacttct
     6961 tctttatttt cttgatgacg atcttctgtt ttttctaata attcttgcat atgtgtctct
     7021 atgaaagagg tgtctaaata cccccttcta aattctcttg tttttgtaat ggcaattaaa
     7081 aatggtattg ttgttctaat atcatcaatc acaaattcct tcaaagcacg ctcaagttta
     7141 ttaaccgcta aatcataact tgttgcttta ataataagct ttgcaagcat ggaatcataa
     7201 taaggcggca cagtatagtc tttataaata tgactatcaa ccctaacaga tggtccaaga
     7261 gctgggtagt attctcctat ttttccagga cttggaataa aatttttcca tacattttca
     7321 gcagtaattc tagcttcaat agcaaaaccc ctaggtttaa tatcgctttg ttctaagtcc
     7381 aaaatttctc ctgctgcaat acgaatttgt cttacaataa gatcaatacc tgtaatttct
     7441 tcagtaattg gatgctcaac ttgaattctt gtattcattt ccataaaata aaagcgatta
     7501 taatcatcaa gcaaaaactc tatagttcca gcatttgtat aacctacagc cttagcagct
     7561 gccacagctg taacacccat ggtttttcta agattatctg aaattccagg gcaaggtgct
     7621 atctcaatta ccttttgatg tcttctttga atagaacaat ccctttcaca aagatggata
     7681 atatttccgt agttatctcc taaaatttga aattctatat gtctgggatt aactacatat
     7741 ttttccataa atacttcatc attattaaag tatgttaaag cttctctttt gcaagattca
     7801 aaggcatttt caagatcttg ttctttatga acaacgcgaa ttccgcgtcc acctccacca
     7861 cctgaagctt ttaaaataac aggataacca atcttctcag caaaaatttt aatttcttcc
     7921 atgctatagg aattcaattt ttcagtccct ggaacaatag gtatgccatt tttagccatt
     7981 aacttacgag cgatattttt atttcccatc ttatggatta cttcagattt tggacctata
     8041 aaaataattc cagcatcttc acaagcctta gcaaattcgt aattctcact taaaaatcca
     8101 taaccaggat gaatcgcatc agcaccacaa gccttagcaa tctcaacaat acgagcaaca
     8161 tctaaatatc ctcttatagc atccgttcct atgcgataag cctcatctgc gatttttaca
     8221 tgcaaacatt cacgatcagg ctctgtaaaa actgcaacac ttttaatatg caaatctcta
     8281 caagcacgga ttactctaac agctatttca gctctatttg ctatgagaat tttatggatt
     8341 tgattcataa tttgcctttt ttgttatatt tttattgtta attttagcaa attttcctta
     8401 caaaaactta gcaaaaaatt taatttattt tagttataat aaaacttttt aaaattttaa
     8461 ttccaataaa gaaaagttat aattataatg gttgctgata aaagattatt ttatttaagt
     8521 tgtattttaa tcaccatagg aatagtattt tcatactctc ttacagcttt tactgttctt
     8581 tttcttgact atagcgagtt tcattttttt attcgtcagc ttttttttgg aattagtggc
     8641 atacttataa tgttttttat ttctcgattg gaccctgata aagcactttc taaaaaaatt
     8701 attttagcta ttttgattat ttcttttatc tttatcatca ttttgccatt tttaccttct
     8761 gcattagcaa cagctagcgg aggagctaaa cgctggatac gcttaggccc actctctatc
     8821 tctcctgtgg aattttttaa aataggattg atttattttt tagcatggag ctatacaagg
     8881 cgtattgatg atagcaaaaa agctatcaga cacgaggctt taattcttct gccttattgc
     8941 atcttagctt ctatagttat aggatatatt tatatcactc aaaacgattt aggacaaagc
     9001 gtaatttctt tctttttgat tctggcttta gctttttttg caggagctag taaaaggctt
     9061 tttgcttttg gaactttaat tattatgatg ataggtataa tggtaatttt tagcaaccaa
     9121 agaagaattc aaagaatcgc ttcttggtgg ggaaatatac aagatgcttt tttacctatg
     9181 cttcctgatt ggctggcaaa tgctttaaga gtaagtagca acagcgagcc ttatcaaatt
     9241 tcacactctt taaatgctat agcccatgga ggaatgtttg gcgaaggcct aggacttgga
     9301 acttttaaat taggcttttt aagtgaagtg catactgact ttgttctttc aggaattact
     9361 gaagaaatag gacttttagg tcttggggtt atttgctata tttatctttg gatgatttta
     9421 agaattttta gaattgcagg aagatgtgaa gctaaacaag attttatttt ttgttcaggc
     9481 atagccttac ttttactttt ttctttcttt atgaatgctt ttggtattat ttctcttact
     9541 ccactaaaag gtgtagcggt tccactttta agctatggag gaagttcaat gtgggcaatt
     9601 tgcataggta taggatatgt attaatgatt tcaaaaaagg ttaaattatg acaatagctt
     9661 taacaggtgg tggaactgga ggacatttgg ccatagtgcg ttgcttatta gaaagtgcga
     9721 ttaaaaaaaa tatagaatgt gtatacatag gcagtcaaaa tggtcaagat aaagcttggt
     9781 ttgaaaatga agtacgcttt aaggaaaaat tttttttaag ctctaaagga gtggttaatc
     9841 aaagcaaatt tgacaaaatc agttctttac tccacacctt aaaactctcc aaagattgta
     9901 gagaaatttt taaaaaatac cacatccaag ccgtttttag tgtaggtgga tacagtgcag
     9961 ctcctgcatc ttttgcggct ttattctcac atttgcctct ttttatacat gaacaaaatt
    10021 caaaaagcgg ctctttaaat atgcttttaa aacctttcgc tacaaaattt tttagcgcct
    10081 ttgaaaaaga aattagccct tatcctgtag cagataaatt ttttgataat gctaggattc
    10141 gcaaagaatt aaaaaatatt attttcttag gaggatcaca aggagctcaa tttatcaacg
    10201 aactagcttt aaatttagca ccaaaacttc aagaacaaaa tatcaaaatc atccatcaat
    10261 gtggaaaaaa tgattttgaa aagtgcaaaa aacattatca aagcttaaat atccaagctg
    10321 atatttttga ttttagttta aatttggaag aaaaaatgaa aaatgcagat ctagctatat
    10381 caagagcagg tgcaagtact ctttttgaac tttgtgctaa tactttgccc actattttta
    10441 taccttatcc ttatgcagct aaaaatcatc aatactttaa tgctaaattt ttacaagatc
    10501 aagctttatg tcaaattttt atgcaaaact ctattaatct tgatgaattt tttaagtcaa
    10561 tattaaaact aaatctagaa aatatttcta caagattgca aaatataacc caaaaaaatg
    10621 gcgcagatat gctaatccaa aaagctttat ttgataattt gacttttata agataaatat
    10681 ccaaagatat ttactaaaat tccaacaaaa actaacatca aaatagcaaa tgaaaaattt
    10741 tcaaatttgt catgcaaaaa acctataatc cattgtcctt gtgctgcaat taaatatcca
    10801 aaaccctgag ctaaagcaga aagtctcgct gctatttgag cattagagct tttttgtgca
    10861 ataaaaagca acgcaatgcc aaaaactcca ccccatggaa aacccatgat aaaagcactg
    10921 ataataatag aaattttact atcaaaaata aagagcatac caaaagcgat cacatacata
    10981 ctgcacaaac ctgctatgta aaaagtatgt aaattttgtc ttaattttcc taaaagtaaa
    11041 gggccaaaaa gagacactgg agctgcaaca agttgagcaa ataaaaccat acttgtagaa
    11101 aattctttat caaatccttt ttctacaaca atttgaacat accaaaaaaa caaagaataa
    11161 gctaaaaaac tttgaaatcc cataaaaaga gtaattttcc aagttgttaa atttgtaaaa
    11221 agattgattt ttttatgagt ttttttctta atacgaaaaa atctaccatt tttagcttga
    11281 ggatagtaaa ctactaaagc tacaaaagaa aaaatagccc agaaaaacat agctccagct
    11341 aaatcaaata cactaagcaa aggtatagct aaagcaatac ccataatcga agaaatactc
    11401 aaaacaagac tataaattcc cattatactt gccatttttt ttggaaattt ttctttaata
    11461 aaactaggaa gtaaaacatt tgcaattgct ataccacagc ccattgctaa cattcctaaa
    11521 aataagccat atacaccaaa ataagaacga ataatttcgc ctaaaaaaat taaaaaaatt
    11581 ccaaaaacaa tagcacgaat aggagaaaaa taccccacaa taaaagaaat acttccaaaa
    11641 gctatcaaag gaagacttgt aagtatgccc gctacggttg agtttaaata atacttatct
    11701 ttaataatat caataatagg ccccactgca gtaattgggg ctctaagatt aaaagctaca
    11761 ataataacaa tagtaacatt aatccaaaat atctttttaa aagaagccat aaaagcctta
    11821 tttgttaagt tctactttga atattttacc ttctaccatc ttaggaatcc ataaaatatt
    11881 accttcaata aatatatctg caggaccttt catcaaagga agttcaagtt ttacagattt
    11941 aacattatct aaattataaa tatatccatt tagattattt ccccaagaac ttaccaataa
    12001 accatcttta taaggaacta ttccatcata agattctttt tcatttttaa ttatactgag
    12061 ttcttttgta tttaaatcat aagccattac aacaccgcca cttacaccat caggatgata
    12121 accagctata aaaagcttat gtttttttct atctagatat aacccatttg gaccgccaaa
    12181 ttttgctaaa tcaagtttta ataattcatc atattgctta gtttttaaat caacctttaa
    12241 aataagccct gtgccagtat cgctaaccaa aagcgtattg tcgtctaatt tttctatgtc
    12301 atttaaaaag attgcacctt taataggtaa attaaaaatt tcttttttag ttttaagatc
    12361 aaaaccgcgt aaaacatcga tatctaccac ataaagagtt tttccaatct ccatcatgcc
    12421 ttttggtgca ttaagatggg ttaaaaattt atattctagc actttgccat ttttatcaag
    12481 cttagaaata aatccatcat tatctttcgc caaaggttca agtttttccc ctacattaga
    12541 tacataaaca tagtttttat ctacaaaaat actttcaggg cttttaaaac catcaaattc
    12601 ttgatatttt aattcacttg caccaagcaa acttccaaga agcgctaaac ttaaaacata
    12661 ttttttcata ttttctcctt tatttaaaaa tattttcatt gaattatatt tatttagata
    12721 aaaaaaatgt gctagttttt tgataaaaaa tacaagtttt ttgttttttg atattgctta
    12781 ggagtttgct catatttctc tttaaatctt tcaataaacc aagctaccga agaaaaagcg
    12841 cactcattag ctatttcatt gatatttttt ttagaaaatt taagtaaaat ctttgctttt
    12901 tgcaaccttt tttcatctaa ccatttttta ggactttgtc caaaacattt cttaaattct
    12961 ttagaaaaag ttgctaaatc taatttcgca aaattagaca tttcatttac gcttaaaaat
    13021 tctctaccac aatactcaaa aagttgggaa agatcaaggc gaaattcttt taaaattcct
    13081 gataaaaaac taataaaata aatattctta tttaaaagca aatgtaaaaa aatctcttca
    13141 aatttcaaac tcactatagg atctaaaatt tgcgtatttt cttcaaaatg cggtgaaaaa
    13201 ctttccaaaa ttccttgcaa aatcttatca ttttttaccc aaaaaatttc atagttttga
    13261 aacttttgat ctagtttaaa aaaatcttta tacttataaa taagctcaat taaaaatgca
    13321 ttgtcaaaaa aaaataaata agcttcataa actcctttac taagtcctac attgcttaaa
    13381 gtatagctcc cagcttttaa aaacaaagtt tcataagagt taatcttata atcttttgat
    13441 gcagtgtgta aaattttata tcctttgcga acaaaagtta aaagatgact tcctacatta
    13501 acaaaagtag aatgcgaagt atccgtttgt gtatatttag caaaagtgca agatttaatt
    13561 tttttataat tgacaccttt taattgcttt aaatcttctg gtaaagaaag aattttattc
    13621 atcgtaaatt ttgcctacat tctaaaagat actttttaag atctttttct ttcattaaaa
    13681 tttcacgcat gcaaacacct actacattta tatctttaaa attttctata ttttgagcat
    13741 tgataccgcc tatagcataa agtggaattt gactaaattc aagcaaggat tttaaaaaat
    13801 caatcccttt aggttctaaa cccatcttgc aagaactttc aaaaatatgc cctacaaaag
    13861 cataatttac cttatagctc atcgcctcta aaagctcttc tttgctatgg actgaagtac
    13921 caagtatatg aaaatatttt gttaatttag gttcttttct tagtaaagaa agcggtgcgt
    13981 gaaaataacg atgtcccaat tttaaacact ccctatcaaa aaaatgcaaa aaacaagtca
    14041 ctttttgctt tgcgcaaatg cttaaaactt cttttgctaa gtcataatac tcaaattcgc
    14101 ttaaatcttt ttctcttaaa actatagcat ctaccttagc cttagcaagt ttttcaatct
    14161 gctttaaaaa gtctatttct acacattttc tatcgcttat ggcgatgatt tttttatccc
    14221 acatagatac tatcgctcat cacagcttgt aaattggatc ttttaagcat agctaaaatt
    14281 tcatctacgc ttctatcatc tgaaatttca aactgctcat cacccttttt ctcaccctta
    14341 tgctcaccta tacccacact cactcctgca ctcattttag tagcaccaag cttgataacc
    14401 tcatctctaa aacctattct ttcacgactt gaaatggtaa tgcccgcaaa aggcaaaaag
    14461 agcctataag cacaaagtac ttgcaaaagg cgtttttcac ttacatcttt aggatggatt
    14521 ttggcattat tgataatagg tcttaaacgc ggcactgaaa tagaaatttc agcatgcgaa
    14581 taagcttgtt gtaaaaaatg tgcatgaagc gccgtagcaa gagcgtcttt tctaaaatca
    14641 tctataccta aaagtgccgc aaaagccact ccacgcatac ccgcttttaa agctctttct
    14701 tgagcattaa agcgataagg aaaaatgcgt ttttcaccag ctaaatgaat tttagaatat
    14761 tttagaggat tgtaagtttc ttgaaaaaca gtcacataat cacaaccctt ttcatgcaaa
    14821 attttatatt catcttcatt cataggataa atttcaacgc ccacaacctt aaaatactct
    14881 ctagctattt tacaagcatt tgctatatat tctacacttg caaactccct gccctcgcct
    14941 gttagcatta aaatttcttc taaaccactt ttagcaatgg cttgcatttc ttcgtgaatt
    15001 tcagcttcat ttagcttagc tcttgcgatt ttattacctt tttgaaaacc acaataaaca
    15061 catttagaat tacaataatt tgacaaataa agcggagtaa aaagagagat agaatttcca
    15121 aaatattttt gcttgacttt agcggattta aaggctaatt cttctatgaa atcttctgct
    15181 gcacttgaaa gcaaggcttt taaatgctct atgcttaaat gtgtttgatt taaagcattt
    15241 ttaacatctt tagcgctaaa ttgactctca tcatagcttt gaacttgagt taaaaccttg
    15301 tttaaaattt cgctttttat ttcctgcatg tgaggtaaat actgcatata atcttgcata
    15361 atcaatccct taaaaagcct gttaatggag aacttgcttt agcttcactc acacttgcca
    15421 cacctgctaa aaaagccgct cttcccgcat ttactgccaa agaaaaagct ctagccatca
    15481 aggctatatc tttagcttca gctatggctg tatttaccat cactgcactt actcccattt
    15541 gcatagcttc acaagcttgt gaaggacttc caatacccgc atctacaatg ataggcaaat
    15601 caatttcatt aagcaaaatt tgtataaatt ccttagcaca taaaccttta ttactcccaa
    15661 taggcgctgc taaaggcatg atagccgcag ctccagcatc acgcatagct ctagctgcgt
    15721 aaagatcagc atgcatgtaa ggtaggggcg taaaaccctc tttagctaaa agctcacaag
    15781 ctttaatcgt ttcataatta tcaggcaata aatacctact atcacttatc acttctattt
    15841 tgataagttc tccacaacca agctctcttg aaagccttgc aatgcgtaag gcttcatcgg
    15901 cgtttcttgc gcctgaagtg ttgggtaaaa gtgtgatatt tttagggata taatcaagta
    15961 tattagcaat ttcccctgta tttgcacggc gtaaggctag agtgataatc tgtgctttag
    16021 cttcttctat agctgatttt ataagctcta gcgaatattt tccagaacct aaaataaatc
    16081 ttgaatcaaa ctcgtatttg cctattttta atttatcgtt ttttaaattt tcttgcattt
    16141 ttactcctta tttgctaaaa gctctaaaac aaggttactt tgatgtcctg cgcaaatatt
    16201 tacccttggc gccataagtc catttcctag cttagcacca tttaccaaat ccccgcacac
    16261 atagaaattt ttagcaattt ttcttgtttg tatgctgttg ctatcaccat agcccgcaag
    16321 ccctgaagcg cagattaaaa taccatcttt gtaaaatcta tgaaaatttt gcgctatcat
    16381 tgcttttgcg atagcactat caaaggcttc acaaactata tctatatctt taaacaaaga
    16441 ctctaaatta tcctcatcga tttttaaagt acaaatttca acgctgatat aaggattaat
    16501 ttcgctaatt tgctctttta aagcttcggt tttaaacttg cccaaatcac ttacacggta
    16561 agcttgacga tttaaattac taggctcaat cacatcaaaa tcaatcaact ttaaataccc
    16621 cactccactt cttgctaaat ttatcgcaat gtgcgatcca agtccgccta aaccacacac
    16681 cgccacgcgc ccatttttaa gtttatcgtg aagctttggt gtatgtcttg ctctcatcat
    16741 agcatctagt gcgtcttttg gaggtaaagt atttttttct atacaaaaaa gctcatcatt
    16801 ttcatttaaa gcgatattct cttttgttgc aaaaccattg ataatccata catcattttc
    16861 atttttgctg atattttcaa aaaattccaa acttgtttta aagtctgtat caagttcttt
    16921 gccattgaat tttactctca tcatccacct cctacaaaac ttacgatttc agctttatcg
    16981 ttttctttta aaatcaaatt ttcaaattcg ctcttaggta caatctctcc atttaattcc
    17041 aaggcgataa gttcgatttt aaaacctttt tctttgataa aatccataaa tttaagctct
    17101 tttaactcaa gcttttgtcc attgataatc attctaaacc tttaaaaatt ttctatcaag
    17161 tctttaaaaa caaggcaaag tttttcaaat tcttctatgc ttaccctttc atcaatagcg
    17221 tgaattctat cattacaaac cccaaattct actaccttta caccgtattt tgcaaaatac
    17281 cttgcatcac ttgtaccgcc tttggtatta agctctggca cttcatgagt gattttttga
    17341 acgctttcat tcattttttg aacgatttta ttatcgatat ttgtcaaaaa agcttcgctt
    17401 gattgtttta gctctaactc atagtttaaa ccatgacaaa ttttttctac atagtttttt
    17461 acatcttcta agcttgtatc aggggaattg cgaacattaa acataagttt taaatcattt
    17521 ggcgtaacat tacacacccc catacctccg cgaatatcgg taataacaat ttttgaagga
    17581 ctaaattcag cacttccagg atcaagatca aaacccgcta aaagctttaa aaccggtgca
    17641 aaatcatgca caggattgat acatttttca ggataagcaa catgcccttg ttttccacgg
    17701 attaaaagtt ttccattgat agaaccacga cgccctattt taatactatc gccgattttt
    17761 ttaacacagg ttggctcggc aaccacagca taatcaggta gcatatctct ttcttgcatc
    17821 cattctaaaa cagccttagt tccatatata gcttcacctt cttcatcact tgttaaaata
    17881 agactcagtc ttgctccttt aaaatctaca ttctttgccg catctacaaa ggctgctact
    17941 ccacttttca tatcttgagc acctcttgca tagataaagc cttctttttc cataggcacg
    18001 aaagcatcgc tactccaacc ctcgcctgca ggcaccacat ctacatgccc accaaaagct
    18061 aaatgctcac cctcatcttt aaatttttta gtgagtaaaa ggtttttaat gccttctttt
    18121 tctataaaaa aagcttcaaa atcactcagt tccatagcga tgaaatttaa agctccatca
    18181 tcatttggcg taacagattt aaattttaaa agttcgatta aaaattcttt tgcattcatt
    18241 ttttatccta agaaagtttt atataataaa ttaagagcaa aatactctat aattatagct
    18301 gaaattatat tgattataaa aacaactttt gcactaaaaa catgactata tcttgccacc
    18361 acaaaggcta aagcacttac ccaaaaaagt atagccacaa caagccctaa agtcatcaaa
    18421 taagcatgat cgctgcttaa aaccacactt gcagcactaa gccaaaatcc tatcacaaaa
    18481 ggatttgaac catttaaaaa agctccttta atataacttt tcaaaagact ttctttaaat
    18541 tctttatgct ctaaatttaa gctttctttc ttttttctta gcatcaaata cgccatataa
    18601 gttaaaaaac aaaaaccaaa aatcgccaaa gaacgcataa aaataacatt acctaaaaaa
    18661 tttaaaagcc caaattgaag caaaaaaaga taaagcatat ctatactaaa tgctccaagt
    18721 cctacagcta tggaattttt aaaagctttt agtgcataag ttaaaatcaa aatatttaca
    18781 ggtccaaaag gcacactcac tccaaagccc aaaaaaactc cacttaaaaa agaatcaaac
    18841 attaccatct ttcataaaat tttctatatc aagtgcgatt ttatcaatag cgcttataat
    18901 atcttctata tagattttat caaaatacca ctctaaattc gcatcttttt cgtagatatt
    18961 taaaatactt ttttcgcaca ttgaagcata acgccctaca ggcaaaaccg ccccacttgt
    19021 gcctacgctg ataaaaagcg aagtttgatt tagcaaagaa taaagcgtag cataagcagg
    19081 ggcttgctct tcaaacatga ctatattgtg tcttaaatcc ttgcttttgc attttgggca
    19141 ttgtttatct gtgatttttt cataacctat attaaaaatt tcttcgcatt ttaagcagcg
    19201 aagttcagac aaaaagccat gcaaatgcac tacatcttta caccctgcac gctctagcaa
    19261 atcatctaca ttttgcgtga tgacaaaaag gtttttaccc catttttctt ttaattgtgc
    19321 gattttttca tgagcatgat ttggctttac attttgaagt tgcgcccttc ttgcatcgta
    19381 aaaatcaagt acttttttag gattttttct aaaacctgtt gcagagcaaa cctccatcac
    19441 atcgtattct tcccaaagtc catcattatc tctaaaagtt ttaagcccac ttggagcaga
    19501 caaacccgct ccgcttaata tcataatgtt tttcatcact aaaccttata aaatttacaa
    19561 agtttagcga aaaatgcttt aagaaaataa atatttttgc aagatttttt ctttttcttt
    19621 ttctaatcta tcaagttcta ttttatattc attgattttt ttctcaatct tgtcagttat
    19681 atctgctatt tgatcttgaa attctaaaga aggaagttta acccttaatg cttttattct
    19741 atctattgaa gctctaagtt ttcttgaaaa tccttgtttt ttaccagctt catttaaaat
    19801 aaaacttatg tatttagcat ttatttttgt atcatcaacc cttaataccc cacaatgatc
    19861 agttggataa aactttttat tttttggtat aaatcccacc atccaatctc catctatacc
    19921 ccacaaaaca gaatcattat cataatcttg caaaatttct ttattaacaa atccaaatac
    19981 ttccaacaca tttgcactat aaacaggaat ttgtccattt tcaagcagct cattatttaa
    20041 aactcttttt ccaatactta gtttaaaaat tggatttgat aaagcatatt ctttaattgt
    20101 tttattaaat gatgataaaa attcactatc caaatttatt ttacacaaat tattaatttt
    20161 atctaaaata gaatttagtt catattcttg attgtcctct ataataccac atttttgaag
    20221 cattgctttg attaggtttt gatactcttt tatactcaaa cttaaagtat tatactgctc
    20281 ttctaccttt tcacactctg ctacgatttg tttttgaatt tcaagcggtg gaagcgggat
    20341 tttaatattt tcaatatctt tagggtatac atgaggttgt gcagcacccc ttgctaaact
    20401 cataatatat ttttgattgc attttaaaac atagtatata aattgtatta ctttcaagtt
    20461 gggtaagtta attgtagtgc aatcagaagc aaatattttt tctttccaaa aattaacata
    20521 tccagcattt gcaccggatg cacttatggt aattgtattc tcatttcgat taaagtcatt
    20581 atgaaaatat gcataatcct taccacctgc aacaacttta atattaccta tttttgctag
    20641 tttttgagta atattttgac ctttttggat tttaatattt tctatctcta ctaatctcac
    20701 caactcatac ttagaatttg caaaaggatt agacatctca ctttgcattg aattgctagg
    20761 atttaaactt atagctttat taaattccac tttttcaaaa tccatcatat caataagcct
    20821 tgctttacta gcatagcctt gtaaatcttt tggtatatcg ctaagagttt ttaaaaatgc
    20881 tttacaaatt aaagtattaa gcttggtctc attttgtgga ttgcctcttt caaaaagtgg
    20941 gctcaaataa ggctcgtgca attcttttaa accttcatca ccttttctat tactccactc
    21001 ataacctaaa aatttctttt gttcttttat atcacttggg gattttatga ttaaaacttc
    21061 ttgattaaga cttagactaa aataaagcaa tttatccttt tctattgcct gagcataagc
    21121 taaaaaggct ttatcttcta aactttgttt atcttcgctt tctttataaa ttttagattc
    21181 tttaagtttt ttataatcac ttgtttgcct aaatgcattg cgataatctt taaaggcttc
    21241 tagctctgtg agtttagaat ctaagtttcc atttaaaaaa ttgctataaa gctctttatc
    21301 aaattttcta aaatcacaat acgcacttag ataattttga taaaagcttt cattgtcttt
    21361 taaattttca gcttctatgc gttctttaat caaactataa tcttgagaaa taagatgatt
    21421 ttcttgttta aaagtttctt ttttgcgtaa aaataaaata atcgtatttg tccctgttgc
    21481 tccaaatgtt tgattaccta gctctacaat ggcaataaaa tcaaaatttt gaaataatat
    21541 ttctcttgta tttttataaa tagaatcttt atttaaaata gaacttggta agataatagc
    21601 agctttagca ttatcattta aaatttgatt tgctcgctca caaaaaaagc attcgataga
    21661 attatttgtt tctatgttta tatcatcgtt gaaaagttta taagtatttt tagatttatc
    21721 acttaaagtt tctaaaaatc cttttacaga ataaggcgga tttgctataa gcaaatcaaa
    21781 actatttgat tctatttgtg gttttgcttt ttctccttct aaattatttg tatttgctaa
    21841 ttcaaaagaa gcaagtgcat cagcgtataa aatattgatt tcattttgcc catacattgc
    21901 acttgatacc ttagaaacct tacttaagcg atactctttt tcaataccat aaatattttt
    21961 ataatgctct ttaagctcat cttctgttag ataacgctta agctcattgg cataggtgtt
    22021 taaaaaatgt ccagcaccac aagcataatc aatcaccctt aaagctttag agtttttgct
    22081 taacatttcg tgaagcggta aagaatacat aataaattca caaatttgaa taggagtaaa
    22141 aaactgccct tcatcttgct tcataccttt ttgcaaaaaa agttcaaaaa gattgcctaa
    22201 aaattgattt gtagagtttt gggtaagctt gtaatttgca aaaagctcta ctatttcttt
    22261 taatacaagt gcatttttta agaataattc tttattatgc acttctaaaa atgcaaaatc
    22321 attatttgaa taaaatttta attctttgat gtaattttgc attacttctt ttaaagtttt
    22381 tatctttaat tgcttaaagt ctttttctat atcttcatta gatacaaagg taattttctc
    22441 tcctaagaat tctttcatag cttctttata aagccacatt aatctatctt gcatatttgc
    22501 ataagtatct gccattacac caaaatatcc aaatttgaga ttgtttttat taaaagtttc
    22561 atcataaatt ttgcaaagaa aaatatttac aagtttatca aaggcatttt ccttgcctga
    22621 tatattatac ttgcgtaaaa tttttgcaaa ttcgtgatat ttgccttctt ctttaagttc
    22681 tttaagatta tcaaaagttg gagtaatttc taaaatttta taggcattga catttgcttc
    22741 aaaaatacct tgtttaaaat attgcagttc ataactttct ttccaagttt taaaaagttc
    22801 tatattgtta ttagattttt tataagaatt ttgcaattcc ttttctttta gatattcttc
    22861 gttatcgtaa gcttgtatga tgtaattttt atattctaac ttatcgctaa aatcacttgt
    22921 ataaagacaa agatatttta cacctttttc ttgctgaaaa taagaaaaaa gctgtccgcc
    22981 atcttcttgc attctattcc attcttttat aaattcacta tttttagaat ctgtggtttt
    23041 acactctata atcaaataag gattgttttc attatccttt actaaaatat cagccttacc
    23101 acctttttta tccctgccaa gattccattt tggctctaac tctaaatgtt cagccttata
    23161 acctttttct aaaagtctat gcacacattc aaaaactaca aaattttcag ggtgtgaaaa
    23221 attagaagta gttttatcgt gaatttttat ttcttttggg taattaatac tttggttttt
    23281 ataatctatt aaaagtgtgt aattattgat tgtttttaca taattttcat ttttattttt
    23341 aaaacctaag ttttctagaa cttgttttaa attatctttt gtaatcattt atttccttat
    23401 aatctcacca ccttagcacc aaagccacct tgattgatcg gtgcgtcatt aaagcccttg
    23461 acacttttat gagttttcaa aaactctctt acagcaaagg caagctttcc tgttcctata
    23521 ccatggtaaa ctaaaacttc atcaaagcct gcaagcaaag catctgaaat aaatttatca
    23581 agccttgaaa tagcttcatc actcctaagc ccgtgcaaat ccaaagttac acttagattg
    23641 cttggtttgc ttatgcttat acttgttttt gctacttttt ttggcattgc gccacttttt
    23701 ttaagcagtt ttaaaggcac acgaagtttg atcccatcgc tttcaaccat agcatcgttt
    23761 ttagaaatgc ttatgatttt acccttaatt ttttcatatt ttacaaaatc ccccacacgc
    23821 aattcttcgt tttgctccat acttggcaag atgatttctt ttttaagttc attggcttta
    23881 ttaagacttc tttgcttgtc ttttatatct ttaagctgta tggttttttt agcttcttct
    23941 atggctttgt gaaatttaaa ttctaaattt ctcaaactcg tgcgaaattc ttgttcattt
    24001 ttttcttttt gatcttttaa agaaagtaaa atttcatcga ctttttgctc ttttttctca
    24061 acattttcaa gcttagcttt tagttctaat tcaagattga tatttttacc cacaagctct
    24121 tctaaatttt ctttatcctc gccataaagc tttttagcct cgctaactaa attcggcgga
    24181 atctgataac gcaaagcggt ttcaaaggca taagattttc ctatagtacc ttttaaaaac
    24241 tcatattttg ggcgtgaaag ctcttcatta tataaagcag caatgagttc aacttgctca
    24301 ttctttgcta aaagcatagc aaggcgtttg tggtgcgtgg tgatgatgat tttaagatta
    24361 ttagctatga gttttgaaat taacacacta tacaaacaag ccgcttcttc aaaatctgtt
    24421 ccaagctcta tttcatcgat acctaaaagc aaatttttct tagaaaaaag tctagaaaaa
    24481 tgcaacattc ttcctgcaaa agttgaaatg tcgtttttaa cattttgtgg atcttctatg
    24541 atggcatcaa attctttaaa agcaccgatt ttactttcac ttgctttgat atgcataggc
    24601 aaaagatgtt tagctaaaaa tgctgcgctt agcatggatt ttaaaagcat ggattttccg
    24661 cctgcattta cccctgtgat gattaaaact tgttttttaa attccaaact cacgcttttt
    24721 ggatttttta aggcaggatg agcgaaattt ttaagcacta aatccgtact ttgatcacac
    24781 aaaacaaatt caaaatccct ttttttagca agcaaaaccc tagcactata atgatcaaaa
    24841 agatcaaagg ctgtattgat aaattttaaa aaaggtaggt tttttgctaa aaaagctgag
    24901 aaatttttag cgtattcata ataaatttct tctttttgat ttttgatttt ttctatatca
    24961 ttttgcaaat tttcaacact taaaggcacg atataaaagc caccgccact acttctacct
    25021 atgatttttg ctttaatagc gtgattaaac ccgcctctta caagcaaggc ttcaagattg
    25081 tttataagat ggatttgtgt atcgataaga taaggtatta aagcttttgt atagcaaaat
    25141 ttcttaaact cagctattat gctttcattt tttaatctta gagcggcatt aagatttaca
    25201 agtctttcat ctaaactttc ttttaattct cctttctcat cgaaattcaa acaaagctcc
    25261 aaagccccgc taacaaattc tatcttttgt agccaagagt ctaaatttgt tcctagtttt
    25321 atttttttta acttttcaaa ataacgaaaa atttttacaa attcaaaaat ttcatctaaa
    25381 tgtaaaattc cttgcttact taaatgtact aaggctttat caagattgct aagctctggc
    25441 atagtaggaa attccacctc acaaagctca tgtatgcgtt taaaatgaag gttagaatct
    25501 ccttgcaaaa aaatctcctt atctcttgca aaaagggctt taaactcttc taaatagctg
    25561 tttaaatcaa gctttgagat caattcttct tttgtatcat tcatcattta acctacaatc
    25621 tttaatatct atgattaaag aattaaaact ttgattatta tcttttgaaa taaaacttcc
    25681 tgtaccaaat tcataattaa aatacgcctt agaaacattg atatctttac ataaaatatt
    25741 tttattttga ttaaaagcta cgataatatc tgttcttaaa tgactttttt gtgtgttttc
    25801 aaattcaaaa aataccgcta aaacaataaa aatcacaagt aaaataccaa aaaaaggttt
    25861 ggttttttta cctaattttt cacgcaaagc aaaagtgatt aaggctaaaa ttaaaataat
    25921 taaaagatat aaaaaaaacc tactcatttt tttgccttaa tttattactg atatctcctg
    25981 cgccaaaacc tataataagc ccttcttcaa aaacctgccc cttagaagcc accaaaaatt
    26041 taccctctct tttgatatct tctacaaata aagccttagg aaaaaccacc tttaaatcaa
    26101 gttctatagg ctcttctcct gcagcataaa caggtaaaat tataagctca tcaacacctt
    26161 caaaagcctt tgcaaattcc tttaaatttg cagccaaacg cgtgtagcgg tggggttcaa
    26221 agatagctgt gattttttta tatccgccta atcttgcgta ttcttgtgct gcacttaaag
    26281 tcgcttttat ttcggtagga tgatgaccat aatcatcgat taaaaccaaa ttttcatcag
    26341 catgtaaaat atcaaaacgc tttttaatac cttgataatt tttaagccta gttcttatcg
    26401 tttctatatc taagaaattt aaagccgcta aaatcgccaa agacgcatca agggctaaat
    26461 gatatcccat gccaaaaact ttaaactcac ctaaatcttt caactcaaag cttgtaaaag
    26521 gtttgaaatt ttctatacac atggtgcagt ttttgatatc tttgctcgga taaagcttga
    26581 ttgactcatt tttataattt ttcaaaaact catcttcagc attaatcacg cgaattttag
    26641 ccgtgtctaa aaactctgta taagcatgat ggagttttga aacttcatta ccataatgat
    26701 ctaaatgctc cgcttctgca ttggtaacta tagccaaata aggatttgaa tttaaaaaag
    26761 aactatcgct ctcatcagct tcaaaaacaa ggttttggct ttccttataa atcatatttg
    26821 aaccaaattc ttttaaaatc gctccgatga tcacagaagc atcattaatc aaagaggcta
    26881 aaatacttga agtcgtgctt tttccgtgtg ctcctgcaac tgcaaaaaca cgcttatctt
    26941 ctaaaataag aggcaaagcc tccttgcgtg aaagacactt aatacctaat tctttagcgt
    27001 atttaaattc aggattttct tctttgatag cagcagaata aataactaaa tctttgttta
    27061 aaatattatc tttatgatga gggatactga ccttaacccc ttctttttct agttctttag
    27121 tgattttact ctctttaaga tcacttccgc taatcttaaa acctttttct tttaaaaatc
    27181 ttgctaaagc ggaaattcct ataccgccta tgccgataaa atggatattt tgcatcattt
    27241 aaacctttat actttaaagg ctaaatttta gcactttttt actaaaaaga aaatataaat
    27301 cctattttga aatgcctaaa cgctcggcta attgatataa atttaactct ctataaaatt
    27361 tatcaaagtc tttagtataa tcatcaaggt taaaagcttt attcatatct tttaaagtat
    27421 cattactttc aaaataatac cctttaccgc cactataaat acctttttta tcaatccata
    27481 cagcatcgtt gatcccaaat tctaatttct catcatttgg tcttgctaac atatttcttc
    27541 cgcctacgct taaatactta acattattta aacttaaagc ataaagagtt ggaaaaatat
    27601 ctttatgaga tcctacacga tctttatcat aataaatatt atcttgcaaa tccttaggaa
    27661 tatagagata aaaaggcaca ctataagcaa aagctttttg ggaatttaaa tccatactca
    27721 tctcgcgtac tctatgatct ccagttgctg ctataatgac attatcttta aaagaactct
    27781 gttttacttt atctagaaat tttccaaatt cattatttgc ataagtataa gctttgataa
    27841 tattgtcttg tttatctttt tcataaggaa gcatattaag caaagtttgt ggaatgtttt
    27901 gtaattttgg caaatcattt tgtggaattt tataaggtgg atgattggac atggtaagag
    27961 caattataag gatgttgtgt ggattttttt gaagtaagtc ataaactttt ttatataaaa
    28021 actcatcagc taccccataa ccattttcgc tatcttttgc tccattatac tctttcatta
    28081 aaatattttc atctataatc tcatctactc ccaaaatact gagataattt ttaatatttt
    28141 gccaagatcc attacctgca cttacaaaaa tcaccttata tcctgctttc ttataaacag
    28201 caataggtgt taaatccaaa taagttttct gaaatttgct tgtagaaata ttagaaaatg
    28261 gacttacaaa aaataagttt gcaaaacttg gtatagttcc attactagaa ctcaaaaagc
    28321 gtttgaataa aaaatcttgc ttaaaatgtt tatctaacga acccaaaaaa ttatgttctg
    28381 tatttgtaaa atcagccaaa ttaagcccaa aactttccat taagttaaca aatacactag
    28441 gatgattctt ttcagctttt agatttatag gactttgatg caaataatca aaaagttttt
    28501 ctttaagttc ttgtgctttt aaaggtgtga tagccttcaa agctgcttct tctttatatt
    28561 gttttaaagc ccaagaaaat gccataattg gatttaacat tgtatcattt acaacactat
    28621 attcgctaaa agaataattt tgcacattta tagccacatg cttaaatgga ccccttaagg
    28681 ctataacata aacaataatt aatattaaat ttaaagctat caagggaaat aatcttaaat
    28741 taacaggttt tagctttaaa tttaatattt tcaaatttaa aaaaaataca aaaactccaa
    28801 aaatcaacat taaagctaaa atttttaaaa ttggataatc gtgataaata atacttaaaa
    28861 tagtttttgc gttatcatct tttagagtaa acataaaaat atcaaattta gtcttgtaaa
    28921 tttcgtaata atagtatttt gcataagaaa atcctataca aagaca
//
LOCUS       DAPIWB010000014        26190 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.014, whole genome shotgun sequence.
ACCESSION   DAPIWB010000014 DAPIWB010000000
VERSION     DAPIWB010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 26190)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26190)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26190
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.014"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            19..1020
                     /gene="mltG"
                     /locus_tag="RJ266_000497"
     CDS             19..1020
                     /gene="mltG"
                     /locus_tag="RJ266_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HDV7354275.1"
                     /translation="MTIPFLSTINKANISTTKNTTIYKIFFFIRNFFLIFILGIFYYL
                     TQPLKSNSVVFIPQGSISQIITYLKQNKYQMSNIDKYILFFLGHPQSGWINIGTKDLN
                     RAEFLHKLTIAKAALQTITLIPGETSVIFLEQAAKQLGLDKDILLKEFQAQAPYDEGV
                     FLPETYKIPKGITENLLIQMLLNHAEISNKKTSEKIFGDYNPKKWHQYIIIASVIQKE
                     AANDNEMPIVASVIYNRLKKGMKLQMDGTLNYGIYSHVKVTPQRIRQDNSSYNTYKFT
                     GLPKEAVCNVSLAAIRAAIFPLKTDYLYFVRDKNTGVHIFSTNIDDHNKAINLQKGK"
     gene            1101..1532
                     /gene="flgB"
                     /locus_tag="RJ266_000498"
     CDS             1101..1532
                     /gene="flgB"
                     /locus_tag="RJ266_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HDV7354276.1"
                     /translation="MINPFKSKELVTGALAGRNLRNQLINANLANVDTPFYKARDIEF
                     ETALVNRANEIFKKNDNKELQLAVTEEEHQKPWKFPDPSKSTIYLRDGHLARNDANTV
                     DLDVETTEMSKNTVMITALDGVLRRQSNIFSSILDASSKLS"
     gene            1542..2036
                     /gene="flgC"
                     /locus_tag="RJ266_000499"
     CDS             1542..2036
                     /gene="flgC"
                     /locus_tag="RJ266_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HDV7354277.1"
                     /translation="MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRR
                     REVIFKATDFDKLLNEQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKD
                     FRMKYDPSHPDANAEGYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAID
                     LLRG"
     gene            2043..2339
                     /gene="fliE"
                     /locus_tag="RJ266_000500"
     CDS             2043..2339
                     /gene="fliE"
                     /locus_tag="RJ266_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HDV7354278.1"
                     /translation="MNNINDLRLNNNISNTNKSQNSTGIGDEFAKMLKNEIDDLNKAQ
                     ESGEAAMTDIATGQVKDLHQAAIAITKAESSMKFMLEVRNKAISAYKEITRTQI"
     gene            2346..4154
                     /locus_tag="RJ266_000501"
     CDS             2346..4154
                     /locus_tag="RJ266_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDV7354279.1"
                     /translation="MQEYKKNRVSKVAFAYCMALLFMIIFISSTFFLTSKRHIPNTEK
                     DQYALALRGSIITKDNFTITSSKQIYRAEIDLRSINKDKFDLFLKLFQIYSGISNDQV
                     ADIKKRMQNQKKRSYNFVLLQNLDSKQASYLKDLAKKLYIQGFFKAFTNNSGRVETRG
                     LNIIEHEEDRIYMSKDSFTPIIGYTKMILDPESGILKNIGVKGLEKYYDACLSPVQNE
                     KIQGLKDIGGNIILNLNSLQQKKINGCDLYLNLSLKLQKSIEKAIDQRNEDLKANEII
                     VGVMESKTGRILALASSRRYDPQNRGKDLSVLNASAIEYGYEAGSVIKPFIFTTALRL
                     GKIKMDEVINTYGGSYKLGRFTIKDDHKMDKMTMEEVIRYSSNIGMIQIAKRLNNIEI
                     VSGLKIFKFGEKSGIDLPYEQKGEIPNPKRLRDIEKSVLSYGYGLKTTFIQLLAAYNV
                     FNNDGFYITPRLAEKFYQNGRFTNLDDDVKKEKILSSEAAKTMQNVLINVIEKGTGKK
                     AITQGIIAGGKTGTARIAERQGYTSNRYNASFFGFANDLNHAYTIGVLVRHPTKPYSY
                     YAAQSALPMFKDVVDILINEEFLTPIQDNNQTSTNN"
     gene            complement(4151..5920)
                     /locus_tag="RJ266_000502"
     CDS             complement(4151..5920)
                     /locus_tag="RJ266_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi symporter"
                     /protein_id="HDV7354280.1"
                     /translation="MQEERNSLKYFKFISWSIFTLVLIFILIRYDELANLLAGVAILL
                     IGMTNLGIGFKAFSGGLLEKILAKSTDTKIKSILFGTLSTLIMQSSTLVSIITISFLS
                     AGLISLGAGIGIIFGANLGNTASSWLIVGLTNIKISMLAIPLLIIGVLFFFQKDSVLK
                     GLGNIFIGIGFFFLGVDYIKSGFENFKHIIDLSRFDFAGFKGVFVFLGLGALLTGVIQ
                     SSTATMAIIVAALLAGQISLENSLAATLGTSVGGVVTAVLASLSTNIEGKKLAFASCI
                     FNFGIAFLIVLIFPYFIHFLNFLSIVLNIEDIALKVALFHTLFNLIGVVLFSFFTPQI
                     VLFLNKIVKAPKDKNKDKPLYLDSSLVKFSDTAIEALRKESEHLYNNTYVIVAHAIGF
                     SRKDIQSDKSFKEILENKKWFSKNVDLDYLYQTRIKVLFEAIIDFSTKAQVYINDETK
                     NHKIFTFKMAAKNLAETTKNLKIIQANIKKYSSSSNEFLALEYNKIRSNLGELLRSIE
                     ELRVVEDREKLYLIIKNLQKGKEILKEIDTLTLSNVEHLISVRKITTAEGISILNDTT
                     FAAKIAEELIGAVEVIFSKDISN"
     gene            complement(5924..6358)
                     /locus_tag="RJ266_000503"
     CDS             complement(5924..6358)
                     /locus_tag="RJ266_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354281.1"
                     /translation="MLGIYLLITALSFLALYFAVKKLTLNIDEQTLLEPIKMDVYPKF
                     CDLIDEKIREFKENVQNTNLALKNSDQKDEFLEKLGDLSRELTFIQTMNLSNKNDSIW
                     QNELFSFLKELENLLLEYLEKGEEEAENLREFLMNEFEKLKG"
     gene            complement(6358..6675)
                     /locus_tag="RJ266_000504"
     CDS             complement(6358..6675)
                     /locus_tag="RJ266_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDV7354282.1"
                     /translation="MIENIPASLWTKQDLNAYQIFDVRTPLEWEEGILPNAQCVALYD
                     NQGLLNAKFLDEFQSKRDESKKLAFICRSGHRSMVAAEFIAEKLGLESINLDGGMLAL
                     KGC"
     gene            complement(6672..8498)
                     /gene="htpG"
                     /locus_tag="RJ266_000505"
     CDS             complement(6672..8498)
                     /gene="htpG"
                     /locus_tag="RJ266_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HDV7354283.1"
                     /translation="MQFQTEVNQLLQLMIHSLYSNKEIFLRELISNASDALDKLNFLS
                     VSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLEN
                     LSGDAKKDSQLIGQFGVGFYSAFMVASKIEVLSKKALDDKAYLWSSDANGYEINDANK
                     EEQGTSITLYLKDDEFANTYKIESIIEKYSNHIQFPIFMEKEEFTPAKEGEEEGKTEL
                     KISQINKANALWRMQKSSLKVEDYERFYEQNFHDSNKPLLYLHTKSEGKLEYNSLFFI
                     PQNAPFDLFRVDYQSGLKLYVKRVFISDDDKELLPTYLRFVRGIIDVEDLPLNVSREI
                     LQENQILKGVKEASVKKILGELEKLKNNDKEKYLSFFKTFGKVLKEGLYGFGGEKDSL
                     LKLMLYKSTKGENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQKNIEV
                     LLMDDEIDSLVTPMLEFEGLKFVAINQVEDKNELSDEEKNIFAPLVAKFKELLKDQVE
                     DVRLTSRLKDSPSCIVYDKNKPDFAMQQLLKQMGQEQNFKPILEINPKHAIFTGLKNN
                     ESFSADIATLVLNMAKLSEGMGVDNPAEFNASLTKIINKAFS"
     gene            complement(8571..8939)
                     /gene="crcB"
                     /locus_tag="RJ266_000506"
     CDS             complement(8571..8939)
                     /gene="crcB"
                     /locus_tag="RJ266_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HDV7354284.1"
                     /translation="MLNTLLVVGFGGFIGAILRMLSINLVNKFFPYSISFGTLFVNVL
                     GSFIIGLLFSYAQNKGLSPLLKSFISTGFLGAFTTFSTFSYQNLLLLQSGNYLHFALN
                     IILNVFLCLFAAWLGFLIFK"
     gene            complement(8933..9625)
                     /locus_tag="RJ266_000507"
     CDS             complement(8933..9625)
                     /locus_tag="RJ266_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HDV7354285.1"
                     /translation="MIYKKIKALYFWIFFVLSVALVIFCFCFTKSQNTLWKIRKIWAK
                     FQRYTISYKQEIIGTFNPQAQMILMNHQSALDIIALEELYPKNLCWIAKKELGEIPIF
                     KVAMKKPKLLCIDRKNPRDLVRVLKEAKERISEDRVLAIFPEGTRSKNEKMLKFQSGA
                     KILSEKLNLKVQPILIVDSAKILDTKSFSASSGVLKIICMDLVDTNDEKWLENTRKKM
                     QELLDQERVKLC"
     gene            complement(9606..10802)
                     /locus_tag="RJ266_000508"
     CDS             complement(9606..10802)
                     /locus_tag="RJ266_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HDV7354286.1"
                     /translation="MKILLTLIFSIVVLFGRGEISVFSGQDENMQKELQKLLQEEQKI
                     YQNILPSDENNDFESNVDDPFVAKGSLVLTNDEYPSRVYVGEVFPITIYARTTENTKF
                     DFNISVEKTNLSFLNPDAKWEFINNEYKTTLWFEAKNSNASLSKISIKLLRNNEAFQE
                     ADINLNPIKFENTLSNKDFSHLVASSLEIKKVKASYFDDANIIMMVELNATNTNLKSF
                     FIEGIQKQGIENLKGDFNASSAFYYAILPLSKTNFEFSYFNKNSKKLENINLKLKISD
                     DEISTQSDLNPVNKDLNIYKQYALWFLAVLFGVLFVWRKNYIILALAVVCFALSFLVD
                     TNTQNAIIKAGSRAKILPTEPSTYFYTANADEKVEVLGKRQNYIKVLFSDGKIGWVNK
                     DDLQKN"
     gene            complement(10799..11446)
                     /gene="purQ"
                     /locus_tag="RJ266_000509"
     CDS             complement(10799..11446)
                     /gene="purQ"
                     /locus_tag="RJ266_000509"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase I"
                     /protein_id="HDV7354287.1"
                     /translation="MKVTIIRFPGTNCEIDTAYAFEKLGVKTQIVWHEEKEFDADLVV
                     LPGGFSYGDYLRCAAIAKLAPAMQGVFNHAKKGGYILGICNGFQILLESGLLKGAMKH
                     NNNLSFISKNQSLRVVSNDNAFLKNFKKDEIISLPIAHGEGNYYADETTLKELQDKDL
                     IILKYEPNPNGSVFDIAGICDENKKIFGLMPHPERACEKVLGNDVGLKMLKGFLS"
     gene            complement(11448..11693)
                     /gene="purS"
                     /locus_tag="RJ266_000510"
     CDS             complement(11448..11693)
                     /gene="purS"
                     /locus_tag="RJ266_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HDV7354288.1"
                     /translation="MEVIVNISLKNGVLDPQGKAVEKALHSLNFNSVKEVKIAKQIKI
                     SLDEKDEKLAKEQVKKMCEELLVNSVIEDYELIIEKE"
     gene            complement(11702..12412)
                     /locus_tag="RJ266_000511"
     CDS             complement(11702..12412)
                     /locus_tag="RJ266_000511"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HDV7354289.1"
                     /translation="MTKKEMLYEGKGKKLFKTDDENLLISEFKDDLTAFNAEKRGNES
                     GKGALNCKISTEIFHLLEKNGIKTHLVEIISDTEQVVKKCKIVPIEVIVRNVATGSLT
                     KRLGIKDGTVLPFALVEFCLKDDALGDPFINDEHCLILNLVQNEAQISEIKNMARKIN
                     SILTPFFDNKNLRLIDFKIELGLTKDNELVLADEISPDSCRFWDKFSNEKLDKDRFRQ
                     DLGNVKMAYEEVLKRILN"
     gene            complement(12414..13748)
                     /locus_tag="RJ266_000512"
     CDS             complement(12414..13748)
                     /locus_tag="RJ266_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HDV7354290.1"
                     /translation="MMELILKTKRFFAGLAGFATTFILCLFLTSHLQAKVDQKEEQVQ
                     KRLEALDKLTKTLAIVEQYYVDDQNISDLVDKSLSGLLSNLDAHSSFLNEKDFNDMKI
                     QTNGEFGGLGITVGMKDGALTVVSPIEGTPADKAGIKSGDIILKINDEATLGINLNDA
                     VDKMRGKPKTQITLTIFRKGATKPFDVTLTREIIKIESVYAKMIENENILYLRVTNFD
                     KNVVDVASKELKKYPNVKGVILDLRNNPGGLLNQAIGLVNLFVDKGVIVSQKGRIASE
                     NQEYKADPKNKISNASLVVLVNGGSASASEIVSGALQDLKRGVIVGENTFGKGSVQQI
                     IPINKTEALRLTIARYYLPSGRTIQAVGVKPDIEVFPGKVNTQEDGFSIKESDLKQHL
                     ESELEKIDKNKKEDKQENKDNKNLISQKQINDDAQLKSAIDTIKILNIKQGQ"
     gene            13866..14156
                     /locus_tag="RJ266_000513"
     CDS             13866..14156
                     /locus_tag="RJ266_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sensing transcriptional repressor"
                     /protein_id="HDV7354291.1"
                     /translation="MCQEKHTHTHSQKHLKAVCNRLSRTIGHLSAIKRMVENDKDCSE
                     ILIQLAAVKAEVNNTAKVVLKEHLAHCMVHAVEENDIQSIEELNKAIDMFMK"
     gene            14268..16841
                     /locus_tag="RJ266_000514"
     CDS             14268..16841
                     /locus_tag="RJ266_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDV7354292.1"
                     /translation="MANIQDFLTDNMLSNLESAASLAIHSKNNEVVPLHLLWALSVDS
                     TSILNQILNKLNISKEALELEIKSRISKLATSSNVNRENIRFSNELINSLENAKGLMS
                     ANGDSYLSVDTWLISESQKSPIKEILAQFLDLREFQKELESLRAGRKMDSKTSDETLD
                     SLNKFGIDLTLKASEGKLDPVIGREEEIERLMQILIRKTKNNPILLGEPGVGKTAIVE
                     ALAQRIIKKDVPKSLQNKKVIALDMSALIAGAKYRGEFEDRLKAVVNEVIKSENIILF
                     IDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTLKEYRKYFEKDAALQRRFQ
                     PVNVGEPSVNEALAMLRGIKEKLEIHHNVTINDSALVAAAKLSKRYIADRFLPDKAID
                     LIDEAAAELKMQIESEPSSLRKVRKDIETLEVENEALKMENDEKNQKRLDEIAKELAN
                     LKEKQNALNSQFENEKSVFDGISAKKKEIDLLKNEASLAKARGEFQKAAELEYGKIPS
                     LEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTSEKQKFLEVE
                     KHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF
                     LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAVRRKPYSVLLFDEV
                     EKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASNAIMNLSGKEQEDAV
                     KNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKDLQMSLENKGIKASLSENA
                     ALLIAKDGFDPDFGARPLKRAIYDLIEDKLSDMILADELHENDSIIIDAKDDEIIIKK
                     A"
     gene            complement(16869..18800)
                     /locus_tag="RJ266_000515"
     CDS             complement(16869..18800)
                     /locus_tag="RJ266_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HDV7354293.1"
                     /translation="MKILKYIFSFFTLLFIAGFIYVAYLFTSADTEGYTFKEYKPPLT
                     TQIYDRNGKLVANIFEQHRFYAPYEELPPRLIEALVAIEDTSFFEHNGVNIDAIFRAA
                     VKIIKSGGKTMEGASTLTQQFIKNTELTPERTITRKIREALLAYKMETILTKEQILER
                     YLNFIFFGHGYYGVKTAALGYFHKNLNELSLKEIAMLVGMPKAPSSYDPTKHLDLSIS
                     RANNVISRMYNLGWISKADYDTAIKEIPQVYDDTLTQNAAPYVVDEVIKQLSPNIKDL
                     KTGGYKIILNIDLDVQNMAQNALKFGYDEIVKRDKDANLSTLNGAMVVVNHQSGDVLA
                     LVGGVDYEKSNYNRATQSMRQPGSSFKPFVYQVAINLGYSPMSEIADISRIFEGGAGN
                     NEDWKPKNEGGKFLGLITLKEALTRSRNLATINLALDMGLDVLYSKLMEFGFKDIPPN
                     LSIVLGSFGISPLEYSKFYTMFGNYGTIKDPQIIRQVQDKTGKTIMEFNSNERKVSDE
                     AQSFLVLDMMRNVVEKGTGRNARVKDIEIAGKTGTTNKSVDAWFCGLTPEIEAIIWYG
                     NDNNKPMRYTEGGARTAAPVFREFLTQYIEKFPDTTRKFSIPNGVYRGNYKGESAYYT
                     TKSPLPKANMKFNESEIIF"
     gene            complement(18797..19348)
                     /gene="maf"
                     /locus_tag="RJ266_000516"
     CDS             complement(18797..19348)
                     /gene="maf"
                     /locus_tag="RJ266_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HDV7354294.1"
                     /translation="MLILASSSISRANLLKTAKIDFRQVSFDYDENLNKNISPFLYVQ
                     KIVLEKERQFLSTLGKDFQNQNLLFADSIVCIDEKILTKAKDKKEAYEMLALQNGKYA
                     SILSAFLLVKPEKRVFSLSKTTLYFKNFDENALRDYVENDLYKGKAGCIMCEGFHQNF
                     ITQQVGNLSTALGLDIQTLKAYL"
     gene            complement(19348..21876)
                     /gene="alaS"
                     /locus_tag="RJ266_000517"
     CDS             complement(19348..21876)
                     /gene="alaS"
                     /locus_tag="RJ266_000517"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HDV7354295.1"
                     /translation="MDIRKAYLDFFASKGHEITPSSPLVPDDATLLFTNAGMVPFKSI
                     FTGEIPRPNPPRKTSCQTCIRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEQA
                     IAYAWEFVTEVLKLPKDRLYVTVHENDDEAFNLWQKHIQKERIYKFGDKDNFWQMGDT
                     GPCGPCSEIFYDQGQEHFNSSEDYMGGDGDRFLEIWNLVFMQYERSANGVLSPLPKPS
                     IDTGMGLERVTAIKEGKFSNFDSSLFMPIINEISKLCNKTYVYESGASFRVIADHIRS
                     SVFLLAQGVSFDKEGRGYVLRRILRRALRHGYLLGFKQAFMYKLVDVVCDLMGGHYTY
                     LNEKKDFIKEQIRLEEERFLSTIENGIEIFNEELKNTKEIFSGEVAFKLYDTYGFPLD
                     LTADMLREKNLKVDEEKFELLMNEQKARAKASWKGSGDKTASGDFKNLLEKFGENHFV
                     GYEKAECESKILALLDEDFKEVSTLKDAGWVMLENTPFYATSGGQSADSGFIAKREVL
                     DTQKFFNLNLSFIKAGEELKVNDIVHARIDTEKREQIARHHSATHLLHHALREILGSH
                     VSQAGSLVESNKLRFDFTHHKALNKEELESIEKRVNEMIINSSEAILENMPLEEAKKS
                     GAIALFNEKYQGNVRVLTLGESKELCGGTHVKNTAQIGSFYIVKESGVSAGVRRIEAV
                     VSKAALEFVKNQLEELSKVKDELKNNDILSGIKKLKNEILSLKNELKNSSKTELDSKN
                     IQGVEICVKRIDNGDIKAMIDDFKNKFAKAVILLIQVKDEKITLAAGVKDVPLKAGAL
                     VKEAAQILGGNGGGRDDFATAGGKDLSKINEALKQSLETIEKAL"
     gene            21991..23064
                     /locus_tag="RJ266_000518"
     CDS             21991..23064
                     /locus_tag="RJ266_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HDV7354296.1"
                     /translation="MNFINLQAQYLAYKDEINAEIESVLSSSSFIGGAKLNEFEQNLA
                     HFLGVKHAIGCSSGTSALYLALRVLDIGKDDEVIVPSFTFIATAEVVALVGAKPVFVD
                     INLSNYNLDFKAVQKAITPKTKAVIAVSMFGQMSDLRALEEILKDKNITLIEDGAQSF
                     GASFKGEKSCSIAKISCTSFFPSKPLGAYGDGGAIFCHDDEIAKKIRILLNHGQTQRY
                     KHEFIGINGRLDTLQAAILNVKLKYLEKELDKRQKLAQIYNANLKNCQIPQINPNAFS
                     AYAQYSVLVEDRASVLQKFEKANIPYAIHYPTPLHKQPCFSEFSNLELKNSEYASEHI
                     LSLPFSPFLSEEEQEQVICIFKD"
     gene            23069..23935
                     /locus_tag="RJ266_000519"
     CDS             23069..23935
                     /locus_tag="RJ266_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDV7354297.1"
                     /translation="MKIGIIGLGKMGQNHLNELSKNSHFKLNALFDLCKNPNLNIFDD
                     IFYDDLDKFLNQNNDIIIIATPTNSHLAIAKKVFKQCKCVLIEKPLALNLKEIDEISN
                     LAKEYSIKVGVGFCERFNPAVLALKKELENEEIISINIQRFSPYPQRISDVGILQDLA
                     VHDLDLLCFLSKQEITKTNLLKKYTQDQTRESESIILCELEKCIASIHQSWNSTQKLR
                     KIHLITKNHFYEANLNDFSLLKDGNFIELTQQSPLFSEHEALLKFIDNQPNHLASTSD
                     AYKVQEILERFA"
     gene            23932..24843
                     /locus_tag="RJ266_000520"
     CDS             23932..24843
                     /locus_tag="RJ266_000520"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HDV7354298.1"
                     /translation="MKLVLFLNMGGATNLQDCEVFLKNMFNDPYILGIKNRFLRKFVA
                     WIITKARVKAMQENYKKMGGKSPLNELTQSLCDKLNLKQDEFKFDFVNLYVPPFATEI
                     LQKYTLNASDEIILFPLYPHHSCTTVTSSLEVLQNEISKQKIQAKVKTIDIFYKNELY
                     NEMIVSHILAKKSKFDAKILIFSAHSLPQSIIDKGDLYEKHVNDHVEILKEKLKDHFG
                     EFILAYQSKLGPVKWLEPNTSDVLANLNDKALIYPISFCIDCSETIFELGMEYKHLTK
                     CDYDLISCPNNSDEFMKFILKYLSDLN"
     gene            complement(24905..26129)
                     /locus_tag="RJ266_000521"
                     /pseudo
     CDS             complement(24905..26129)
                     /locus_tag="RJ266_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002882411.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
BASE COUNT         9322 a         4364 c         3653 g         8851 t
ORIGIN      
        1 tcaaattgga tactagagat gacaattcca tttttaagca ctataaacaa agctaatata
       61 agcacaacaa aaaatacaac aatatataaa attttctttt tcatacgcaa cttctttttg
      121 atatttattt tggggatttt ttattatcta actcagcctt taaaaagcaa ttctgtggta
      181 tttattcccc aaggttcaat ttctcaaatt ataacatatt taaagcaaaa taaatatcag
      241 atgagtaata ttgataaata tattttattt tttttaggac accctcaatc aggctggatc
      301 aacataggta caaaagattt aaatagagct gaatttctac ataaactcac tattgctaaa
      361 gcagcacttc aaaccattac tcttatccca ggagaaacaa gcgtaatctt tctagaacaa
      421 gcagccaaac aacttggact tgataaagat atacttttaa aagaatttca agctcaagct
      481 ccttatgatg aaggagtttt tttaccagaa acttataaaa tcccgaaagg cattacagaa
      541 aatctactca ttcaaatgct tttaaaccat gctgaaattt ccaataaaaa aacttctgag
      601 aaaatttttg gtgattataa tccaaaaaaa tggcaccaat atatcatcat cgcttctgta
      661 atacaaaaag aagctgctaa tgacaatgaa atgcctatag ttgcaagcgt aatttacaat
      721 cgacttaaaa aaggtatgaa acttcaaatg gatggaactt taaattatgg aatttattcc
      781 catgtaaaag ttaccccaca aagaataaga caagataata gctcttataa tacctataaa
      841 tttacaggat tgcctaaaga agcggtttgt aatgtttctt tagctgctat tcgtgcagct
      901 atttttcctt taaagacaga ttatttatat tttgtgcgtg ataaaaatac tggagttcat
      961 atttttagca caaatataga tgatcacaat aaagccataa atttacaaaa aggaaaataa
     1021 tttttgatat ttttatacaa aatagttaaa ttggaacagt atttgcttgt taatattaaa
     1081 aattataaaa aggataaaaa atgattaacc catttaaatc aaaagaactg gtcactggtg
     1141 ctttagcggg tagaaatcta agaaatcaac tcatcaatgc caatcttgca aatgttgata
     1201 ctccttttta taaagcaaga gatattgaat ttgaaacagc tttggtaaat cgtgcaaatg
     1261 aaattttcaa aaaaaatgat aataaagaat tgcaattagc cgtaactgaa gaagagcatc
     1321 aaaaaccttg gaaattccct gatcctagta aatctactat ttacttaaga gatggtcatt
     1381 tagcaagaaa tgatgcaaat actgttgatc tagatgtaga aaccacagaa atgagtaaaa
     1441 atacagttat gataacagct cttgatggag ttttaagaag acaaagcaat atctttagtt
     1501 ctatacttga tgcaagctct aaattaagtt aaaggtaaat tatggcatac ttaagtgatt
     1561 ttgatattag tggttatggt ttaagtgctc agcgttttag aatgaatgtt attagctcta
     1621 atatagctaa tgcaaacact acaagaacag ctgaaggtgg gccttataga agacgcgaag
     1681 tgatctttaa agcaacagat tttgataagc ttttaaatga gcaaattaac aaagataata
     1741 attttttaaa atatgaaaat cctttaaatg atccaagttc gccagaagaa gctaaacctg
     1801 ctattcaaag tgttgtagtg gataaagtgg tcagagatga caaagatttt cgtatgaagt
     1861 atgatccaag ccatcctgat gcaaatgctg aaggttatgt agcgtatcca aatgtaaacc
     1921 ctgttattga aatggcagat ttgattgaag ctacaagagc ttatcaagcc aatgtaagtg
     1981 cttttacaag tgcaaaaact atagctcaaa gtgcgattga tttattaaga ggataataaa
     2041 aaatgaacaa tattaatgat ttaagattaa ataataatat ttcaaatacc aacaaaagtc
     2101 aaaattccac aggaattggt gatgaatttg ccaagatgct taaaaatgaa atcgatgatt
     2161 taaataaagc acaagaaagt ggagaagctg caatgacaga cattgccaca ggacaagtaa
     2221 aagatttaca tcaagcagct atagctatca ctaaagctga aagcagcatg aaatttatgc
     2281 tagaagtaag aaataaagcg atcagtgctt ataaagaaat cacaagaact caaatttaaa
     2341 ccctaatgca agaatataaa aaaaataggg tttcaaaagt tgcctttgcc tactgcatgg
     2401 cacttttgtt tatgattatt tttatcagct ctactttttt tcttacatca aaacgtcata
     2461 tacctaacac tgaaaaagat caatacgctc ttgctctaag aggatcgatt ataaccaaag
     2521 ataattttac tatcacaagt tctaaacaaa tttatcgtgc tgaaattgat cttagaagca
     2581 ttaacaaaga taaatttgat ctatttttaa agctttttca aatttatagt gggataagta
     2641 acgatcaagt agcagatatt aaaaaaagaa tgcaaaatca aaaaaaacgc tcttataatt
     2701 ttgttctttt acaaaactta gactccaagc aagcaagcta ccttaaagat cttgctaaaa
     2761 aactttatat acaaggtttt ttcaaagctt ttacaaataa ctcaggaaga gttgaaacaa
     2821 gaggattaaa tatcatcgaa catgaagaag atagaattta catgtcaaaa gattctttta
     2881 ctcctattat cggttatact aaaatgatat tagatccaga aagtggaatt ttaaaaaata
     2941 taggagttaa aggtttagaa aaatactacg atgcatgtct aagccctgtt caaaatgaaa
     3001 aaattcaagg acttaaagat ataggtggaa atattatttt aaatctaaat tcactacaac
     3061 aaaaaaagat caatggttgt gatttatatt taaatctttc tttaaaactg caaaaaagta
     3121 tagagaaagc tatagatcaa agaaatgagg atttaaaagc caatgaaatc atcgttgggg
     3181 taatggaaag taaaacagga agaattttag ctctagcaag ctcaaggcgt tatgacccac
     3241 aaaatcgcgg aaaggatcta tcagttctta atgcaagcgc tatagaatac ggctatgaag
     3301 caggttctgt tatcaaacct tttatcttta caacagcctt aagacttggt aaaataaaaa
     3361 tggatgaagt gattaatact tatggcggtt cttacaagct aggacgtttc accatcaaag
     3421 acgatcacaa aatggacaaa atgactatgg aggaagttat aagatattct tcaaatatag
     3481 gcatgataca aattgctaaa aggcttaaca atatagaaat cgtatcagga cttaaaatat
     3541 ttaaatttgg cgaaaaaagt ggtattgatc taccctatga acaaaaagga gaaattccaa
     3601 atcctaagcg cttaagagat atagaaaaat ctgttttaag ttatggttat ggacttaaaa
     3661 caacctttat acaactcctt gcagcttata atgttttcaa caatgatggg ttttatatca
     3721 caccacgttt agctgaaaaa ttctatcaaa atggacgctt tacaaatctt gatgatgatg
     3781 taaaaaaaga aaaaattctt tctagcgaag ccgctaaaac gatgcaaaat gttcttataa
     3841 atgttataga aaaaggaaca ggaaaaaagg caattacaca aggtattatt gcaggaggta
     3901 aaacaggaac ggcaagaata gccgaaagac aaggttacac ctcaaatcgc tacaatgcat
     3961 ccttttttgg ttttgcaaat gatttaaatc acgcctatac cataggagtt ctcgtaagac
     4021 atcctactaa accttatagt tattatgctg cacaaagtgc tttgcctatg tttaaagatg
     4081 ttgttgatat tttaatcaat gaagaatttc taacgcctat acaagacaat aaccaaacta
     4141 gcacaaacaa ctagtttgat atatctttag aaaatatcac ctcaacagca cctataagtt
     4201 cttcagcaat cttagcagca aaagttgtat cattaagtat tgaaattcct tcagctgttg
     4261 tgatttttct tactgaaata agatgttcaa cattgctcaa ggttaaagta tcgatttctt
     4321 ttaaaatttc ttttcctttt tgaagatttt taataatcaa ataaagcttt tcacgatctt
     4381 caacaactct aagctcttcg atacttctta aaagctctcc taaattcgat ctaattttat
     4441 tgtactctaa agccaaaaat tcattagaag aactagaata tttcttaata tttgcttgga
     4501 taatttttaa atttttagtt gtttcggcta aatttttagc tgccatctta aaggtaaaaa
     4561 ttttatgatt ctttgtttca tcgttaatat aaacttgtgc tttagttgaa aaatcgataa
     4621 tagcttcaaa aagaaccttt atcctagttt gatacaaata gtccaaatcc acatttttac
     4681 taaaccactt tttattttct aaaatttctt taaaactttt atcactttgt atatctttac
     4741 gactaaaacc tatagcatga gcaacaatta cataggtatt gttataaaga tgctcgcttt
     4801 ctttccttaa agcttcgatg gctgtgtcac taaacttaac caaactacta tcaagatata
     4861 aaggcttgtc tttattctta tctttaggag cttttactat cttatttaaa aaaagaacaa
     4921 tttgaggagt aaagaatgaa aaaagcacaa caccaattaa attaaacaaa gtgtgaaata
     4981 atgctacttt caaagctata tcttctatgt ttaatacaat ggataaaaaa ttaagaaaat
     5041 gtataaaata aggaaaaata agcactatta aaaaagctat accaaaatta aaaatacaac
     5101 ttgcaaacgc taatttcttt ccttcaatat tggtacttaa agaagctaaa acagccgtta
     5161 caactcctcc aacactagta cctaaagttg ctgctaagga attttccaaa ctgatttgtc
     5221 ctgcaagtaa agcagcgaca ataatagcca ttgtagctgt gcttgattgt ataactcctg
     5281 taagcaaagc acctaatcct aaaaaaacaa aaactccttt aaaaccagca aaatcaaaac
     5341 gagaaagatc aattatatgt ttaaaatttt caaaaccact tttaatataa tccacaccca
     5401 aaaagaaaaa tcctatacca ataaaaatat tacctaaacc ttttaaaaca ctatcttttt
     5461 gaaagaaaaa taatactcca ataatcaaaa gtgggatagc tagcattgaa attttaatat
     5521 ttgtcaaacc aacaatcagc caagaacttg ccgtatttcc taaatttgct ccaaaaataa
     5581 ttcctatgcc cgcacccaaa gaaataagcc ctgcgctcaa aaaagaaatt gtaataatag
     5641 aaactaaagt tgaagattgc ataattaaag tacttaaagt accaaaaagt atacttttta
     5701 tctttgtatc ggttgacttc gctaaaattt tttcaagcaa accaccacta aaagctttaa
     5761 aacctatacc taaattagtc attccaataa gaagtattgc cactcctgct aaaagattgg
     5821 caagctcgtc ataacgaatt aaaataaaaa tcagaactaa agtaaaaata ctccatgaaa
     5881 taaatttaaa atattttaaa gaatttcttt cctcttgcaa tgcctaacct tttagttttt
     5941 caaattcatt catcagaaat tctcttaaat tttcggcttc ttcttcgcct ttttctagat
     6001 actcaagcaa taaattttct aattccttta aaaaagaaaa aagttcattt tgccagatac
     6061 tatcgttttt attgcttaaa ttcatggttt gtatgaaagt caactctctg cttaaatccc
     6121 caagtttttc taaaaattca tctttttgat cagaattttt taatgctaaa ttagtatttt
     6181 ggacattttc tttaaattct ctgatttttt catcgattaa atcgcaaaat ttcggataaa
     6241 catccatttt aataggctct aaaagggttt gctcgtctat atttaaagta agctttttaa
     6301 cagcaaaata aagagctaaa aaagacaaag ctgttatgag taaataaatt cctagcatta
     6361 acaaccctta agggctagca ttccgccatc taaattgatg ctttcaagtc ccaatttttc
     6421 agctataaat tcagctgcaa ccatgcttct atggccacta cgacaaataa aagcaagttt
     6481 tttactttca tctcttttgc tttgaaattc atctaaaaat ttagcattta aaagcccttg
     6541 attatcatat aaagccacac attgcgcatt aggtaaaata ccctcttccc attctaaagg
     6601 agtacgcaca tcaaaaattt gatatgcgtt taaatcttgc tttgtccaaa gacttgcagg
     6661 gatattttct atcatgaaaa agccttattg ataatttttg taaggcttgc attaaattca
     6721 gcaggattat ccactcccat accttcgctt agttttgcca tatttaaaac tagggttgct
     6781 atatctgcac taaaactttc gttgttttta agacctgtaa aaatagcatg ttttggattg
     6841 atttctaaaa taggtttgaa attttgttct tgacccattt gttttaagag ttgttgcata
     6901 gcaaaatcag gtttattttt atcataaact atacaacttg gactatcttt taaacgactg
     6961 gttagtctta catcttcaac ttgatctttt agaagttctt taaatttagc tacaagtgga
     7021 gcaaaaatat ttttttcttc atcgcttagt tcatttttat cttctacttg attaatagct
     7081 acaaatttca aaccttcaaa ttctagcata ggagttacca aagaatcaat ctcatcatcc
     7141 atgagtaaaa cttctatatt tttttgttta tactcttcaa gcaaaggaga ggttcttaat
     7201 aaactttcat tatttcctgc tatataaaaa atttcctttt gttcgccttg aaggtcattt
     7261 ttatactctt ctaaagagcg taaattttca cctttggtgc ttttataaag catgagtttt
     7321 aaaagactgt ctttttctcc gccaaaacca taaagtcctt cttttaatac cttgccaaag
     7381 gttttaaaga aagataagta tttttcttta tcattgtttt taagtttttc aagttcacct
     7441 aaaatctttt taacgctagc ttctttaaca ccttttaaaa tttgattttc ttgtaaaatt
     7501 tcacgactta cattaagtgg taaatcttct acatcgataa tcccccgcac aaaacgcaaa
     7561 taagttggta aaagttcttt atcgtcatca ctgataaata cgcgttttac ataaagtttt
     7621 aagccacttt gataatccac acggaataaa tcaaaaggtg cattttgtgg tatgaaaaat
     7681 aaagaattgt attctaattt tccttcgctt ttggtgtgaa gataaagtaa aggtttgttt
     7741 gaatcatgaa aattttgctc ataaaatctt tcataatctt ctactttaag gcttgatttt
     7801 tgcattctcc ataaagcgtt ggctttattg atttgagaaa ttttaagttc agtttttcct
     7861 tcttcttcgc cttctttagc aggagtaaat tcttcttttt ccatgaaaat tggaaattga
     7921 atatgattag aatatttttc tataatgctt tcgattttat aagtattagc aaactcatca
     7981 tcttttaagt ataaagtaat gcttgttcct tgttcttctt tgtttgcgtc attaatctca
     8041 taaccatttg catcagaact ccaaagataa gctttatcat ctaaagcttt tttgcttaaa
     8101 acttcgattt tactagccac cataaaagca gaataaaaac ctactccaaa ttgtcctatg
     8161 agttgagaat cttttttagc atcaccactt aaattttcta aaaaactttt agtaccgctt
     8221 tttgctatgg ttccaaggtt gttaataaga tcatctttat ccatacctat accattatca
     8281 ctaatgctta aagttttttt atctttgtca attttgattt caattttagg ttcgaatttt
     8341 aagcttttat atttatcatc acttacgctc aaaaaattaa gtttgtctaa agcatcgctt
     8401 gcatttgaaa taagctctct taaaaaaatt tctttattag aatataaaga atgtatcata
     8461 agctgtaaaa gctgattgac ttcggtttga aattgcattt taatttcctt tgtaattttt
     8521 taaagtggta ttttagcaaa aaatacaaat tctaaagtaa atttaaagat ttatttgaaa
     8581 attaaaaagc caagccatgc ggcaaataag caaagaaaga catttaagat aatatttaac
     8641 gcaaaatgaa gataatttcc actttgcaaa agaagtaaat tttgataaga aaaagtagaa
     8701 aaagttgtaa aagctcctaa aaaacctgta cttataaagc ttttaagcaa aggagataaa
     8761 cctttatttt gtgcataaga aaacaaaagt cctatgataa aagaacccaa aacatttaca
     8821 aaaagagttc caaaactgat agaataagga aaaaatttat tcactaaatt tatagaaagc
     8881 attcttaaga ttgctcctat aaatccccca aaaccaacta ctagaagagt atttagcaaa
     8941 gcttgactct ttcttgatcg agtaattctt gcattttttt tctggtgttt tcaagccatt
     9001 tttcatcatt tgtatcgact aaatccatac aaatgatttt aagtactccg ctgcttgcgc
     9061 taaaactttt tgtgtctaaa atttttgcag aatccacaat taaaataggt tgaactttaa
     9121 gatttaattt ttcacttaaa atttttgctc cactttgaaa tttaagcatt ttttcatttt
     9181 tagatctagt tccttctgga aaaatagcca aaaccctatc ttcactaatt ctttcttttg
     9241 cttcttttaa aactcgtacc aaatcacgtg gattttttct atctatacaa agaagttttg
     9301 gttttttcat agcaactttg aaaataggaa tttctcctaa ttcttttttg gcaatccagc
     9361 ataaattttt aggatataat tcttctaaag cgatgatatc taaagcactt tgatgattca
     9421 ttaaaatcat ctgagcttgc ggattaaaag taccaatgat ttcttgttta taagagatag
     9481 tatatctttg aaatttagcc caaattttgc ggattttcca aagtgtgttt tgagattttg
     9541 taaagcaaaa acaaaaaatc accaaagcaa cacttaaaac aaaaaaaatc caaaaataaa
     9601 gagctttaat ttttttgtaa atcatcttta ttaacccaac ctatttttcc atcagaaaac
     9661 agtactttaa tataattttg tcttttgccc aaaacttcta ctttttcatc tgcatttgcc
     9721 gtataaaaat aagttgaagg ctctgtaggt aaaattttag ccctagaacc agccttgata
     9781 attgcatttt gagtattggt atctacaaga aaactaagtg caaaacaaac aactgccaaa
     9841 gccagaataa tgtaattttt tctccataca aataaaactc caaataaaac cgctaaaaac
     9901 cacaaagcat attgtttata aatatttaag tctttattta caggatttaa atcactctga
     9961 gtactaatct catcgtcact aatttttaat tttaaattta tattttcaag ctttttactg
    10021 ttcttattga aatacgaaaa ttcaaaattt gttttactta atggcaaaat agcataataa
    10081 aaagcactag aagcattaaa gtctcctttt aaattttcaa taccttgctt ttgaattcct
    10141 tctataaaaa agcttttaag atttgtattg gttgcgttta gttctaccat cataatgata
    10201 ttagcatcat caaaataact cgctttaact tttttaattt ccaaagaact tgccacaagg
    10261 tgtgaaaaat ccttattgga taaagtattt tcaaatttga taggattaag attgatatca
    10321 gcctcttgaa aagcttcatt atttctaaga agtttgatag aaattttact caaactagca
    10381 tttgaatttt tggcttcaaa ccataaagtt gttttatatt cattgttgat aaattcccat
    10441 tttgcatctg gatttaaaaa agataaatta gttttttcta cgcttatgtt aaaatcaaat
    10501 tttgtatttt ccgtagtgcg agcatagatc gtaataggaa aaacttctcc aacatatact
    10561 ctacttggat attcatcatt tgtaagaacc aaactccctt tggctacaaa aggatcatct
    10621 acattgcttt caaagtcatt gttttcatca cttggcagaa tattttgata aattttttgt
    10681 tcttcttgga gtaatttttg taattctttt tgcatatttt catcttggcc gctaaataca
    10741 gaaatttcac ccctgccaaa caatacaaca atgctaaaaa ttaaagttaa taaaattttc
    10801 aagataaaaa gcctttaagc atttttaaac ctacatcatt acctagaact ttttcacaag
    10861 cacgctcagg atggggcata agtccaaaga tttttttgtt ttcatcacaa attcctgcga
    10921 tatcaaatac agaaccattt ggatttggct cgtattttag aataataaga tctttatctt
    10981 gcaattcttt taaagtagtc tcatcagcgt aataatttcc ctctccatgg gcaattggca
    11041 aactaataat ttcatctttt ttgaaatttt tcaaaaaggc attatcatta gaaaccactc
    11101 ttaaactttg gttttttgag ataaagctaa gattgttgtt atgcttcatt gcacctttta
    11161 aaagaccact ttcaagtaaa atttgaaaac cattacaaat acctaagata tatcctcctt
    11221 tttttgcatg attaaaaaca ccttgcatag caggagcaag ttttgcaata gctgcgcatc
    11281 ttagataatc tccataagaa aatcctcctg gtaaaacaac taaatctgca tcaaattctt
    11341 tttcttcatg ccaaacaatc tgcgttttta ctccaagttt ttcaaaggca taagctgtat
    11401 caatttcaca atttgtcccc ggaaatctaa taatagtaac tttcatttta ctctttctca
    11461 attataagct cataatcctc aatgacgcta tttaccaaca actcttcaca catttttttt
    11521 acttgttctt tggctaattt ttcatctttc tcatcaagag aaattttgat ttgttttgct
    11581 atttttactt ctttaacact attaaaattt aaagaatgca aagctttttc caccgctttg
    11641 ccttgtggat ctaaaacccc attttttaaa gaaatattta caataacttc catatttttc
    11701 cttaatttaa tattcttttt aaaacttctt cataagccat ttttacatta cctagatctt
    11761 gacgaaatct atctttgtct aatttttcat tactaaattt atcccaaaat ctacaactat
    11821 cagggcttat ttcatcggct aaaacaagtt cattatcttt agttaaaccc agttcgattt
    11881 taaagtcaat cagccttaaa tttttattgt caaaaaatgg agttaaaata gagttaatct
    11941 ttctagccat atttttaatt tcactaattt gagcttcatt ttgcactaaa tttaaaatca
    12001 aacaatgctc atcattgata aaaggatcgc ctaaggcatc atctttaaga caaaattcca
    12061 ccaaagcaaa aggtagcaca gtaccatctt taatgcccag tctttttgta agagaacctg
    12121 ttgcaacatt gcgtactata acttcaatag gaacaatttt acatttttta accacttgtt
    12181 ctgtatcgct tataatttct accaaatggg ttttaatccc atttttttca agcaaatgaa
    12241 aaatttcagt actgatttta cagtttaatg caccttttcc actttcattg cctctttttt
    12301 ctgcattaaa agcagttaaa tcatctttaa actcactaat tagtaaattt tcatcatcag
    12361 ttttgaaaag ttttttacct tttccttcat aaagcatttc tttttttgtc attttattgt
    12421 ccttgtttga tatttaaaat tttaatagta tcaatagctg attttaactg tgcgtcatca
    12481 ttgatttgtt tttgactgat tagattttta ttgtctttat tttcttgttt atcttctttt
    12541 ttatttttat ctattttttc aagctcactt tctaaatgtt gttttaagtc gctttctttt
    12601 atagaaaaac catcttcttg agtatttact ttacctggaa aaacttcaat atcaggtttt
    12661 acacccactg cttgaatagt acgcccgctt ggaagataat atcttgcaat agtaagcctt
    12721 aaagcttcag ttttattaat aggtatgatt tgctgaacac taccttttcc aaaagtattt
    12781 tcacccacaa taacaccgcg tttaagatct tgtaaagctc cgcttacgat ttcacttgca
    12841 ctagcacttc caccatttac aagcacaacc aaagaagcat tagaaatttt gtttttagga
    12901 tcggctttat attcttgatt ttcacttgcg atgcgtcctt tttgagaaac aataacacct
    12961 ttatctacaa ataaatttac aagtcctatg gcttgattta aaagtccacc aggattattt
    13021 ctaagatcta aaataactcc tttaacatta ggatattttt taagttcttt acttgccaca
    13081 tctacaacat ttttatcaaa atttgtaacc ctaagataaa gaatgttttc attttctatc
    13141 atttttgcat aaacactttc tatcttaata atttctcttg taagtgtaac atcaaaaggt
    13201 tttgttgcgc cttttctaaa aatagttaaa gtgatttgag tttttggctt accacgcatt
    13261 ttatctacag catcattgag attaattcct aaagtggcct catcattaat ttttaaaata
    13321 atatctcctg attttatccc tgctttatct gctggtgttc cttctatagg agaaacaact
    13381 gttaaagcac catctttcat acctacggtt ataccaaggc caccaaattc gccattggtt
    13441 tgaattttca tatcattaaa atctttttca tttaaaaaag aagaatgcgc atcaagattg
    13501 cttaaaagtc ctgataaaga tttatccacc aaatcgctga tattttgatc atccacatag
    13561 tattgctcta ctatggcaag agtttttgta agcttatcta aagcttctag gcgtttttga
    13621 acctgctctt ctttttgatc aactttagct tgtaaatgac ttgttaaaaa tagacataaa
    13681 atgaaagtag tggcaaagcc tgcaagaccc gcaaaaaatc gttttgtttt caaaataagc
    13741 tccatcattg agttttagtt taaagagtaa attttaataa aaattgctta aaaattcgta
    13801 aataaattta aattcttaaa aatatgttaa aatagactaa aaatttcaaa aagaaagtta
    13861 atacaatgtg ccaagaaaaa catactcata cacattctca aaaacatctt aaagcagttt
    13921 gcaatcgtct aagtagaacc ataggacatt taagcgctat taaaagaatg gttgaaaatg
    13981 acaaagactg tagtgaaatt ttaatccagc ttgctgccgt aaaagccgaa gttaacaata
    14041 ctgcaaaagt agttttaaaa gaacatttag ctcattgtat ggtacacgcc gtagaagaaa
    14101 atgatattca aagtatagaa gaattaaaca aggctataga tatgtttatg aaataatcta
    14161 aaattagtca tttgtcctat tatttaaaaa attttactca attaacttga cattatatga
    14221 ctaaagttat ataatagcaa gtctataaac taaataaagg ataaaacatg gcaaatatac
    14281 aagatttttt aactgataat atgctttcaa accttgaaag tgcagcatct ttagctatac
    14341 attctaaaaa taatgaagtt gtacctttac atcttttatg ggctttaagc gtagatagta
    14401 caagtatttt aaatcaaatt ttaaataaat taaatatttc taaagaagcc ttagagcttg
    14461 aaattaaaag cagaatttca aaacttgcaa cgagttcaaa tgtaaaccgt gaaaatatac
    14521 gcttttccaa tgaacttata aattcattag aaaatgctaa aggattaatg agtgctaatg
    14581 gagatagtta tttaagtgtg gatacttggc ttataagtga aagtcaaaaa agtcctatta
    14641 aagaaatttt ggcgcaattt ttagatttaa gagaatttca aaaagagctt gaaagtctaa
    14701 gagcgggacg aaaaatggat agcaaaacaa gcgatgaaac tttagatagc ttaaataaat
    14761 ttggtataga tttaacctta aaagcaagcg agggtaaact tgatcctgtt ataggcagag
    14821 aagaagaaat cgaacgtttg atgcaaattt taatacgtaa aaccaaaaat aaccctatac
    14881 ttttaggtga accaggcgta ggaaaaacag ctatagtaga agctttagca caaagaatta
    14941 ttaaaaaaga tgttccaaaa tctttgcaaa ataaaaaagt catcgctctt gatatgagtg
    15001 ctttaattgc aggtgcaaaa tacagaggag aatttgaaga tagattaaaa gctgtggtta
    15061 atgaagtgat aaaaagtgaa aatatcattc tttttatcga tgaaattcac actatagtag
    15121 gagctggagc gagtgaaggc agcatggatg cggcaaatat tttaaaacct gctcttgcaa
    15181 gaggtgaact ccataccata ggcgcaacta ctttaaaaga atatcgtaaa tattttgaaa
    15241 aagatgcagc cttgcaacgc cgttttcaac ctgtaaatgt aggtgagcca agtgttaatg
    15301 aggctttggc tatgttaagg ggtataaaag aaaagcttga aattcatcat aatgtaacca
    15361 taaatgatag tgctttagta gccgcagcta aactttcaaa gcgttatata gcagatcgtt
    15421 ttttacctga taaggccatt gatttaatcg atgaagctgc agctgaactg aaaatgcaaa
    15481 ttgaaagcga accaagttct ttaagaaaag tacgcaaaga tatagaaact ttagaagttg
    15541 aaaatgaagc tttaaaaatg gaaaatgatg aaaaaaatca aaaaagactc gatgaaatcg
    15601 caaaagaact agctaattta aaagaaaaac aaaatgccct aaattcacag tttgaaaatg
    15661 aaaaaagtgt ttttgatggc ataagtgcta agaaaaaaga aattgatctg cttaaaaatg
    15721 aagcttcttt ggctaaagct agaggtgaat ttcaaaaagc agccgagcta gagtatggaa
    15781 aaattccaag tcttgaaaaa gaagtagaaa ttttagaaga taaatggaaa aaaatgagtg
    15841 aaaatggagt tttacttaaa aatcaagtag atgaggattt ggttgctgga attttaagca
    15901 aatggacggg tattagcgtg caaaaaatgt taacttctga aaaacaaaaa ttcttagaag
    15961 tggaaaaaca tttaaaagaa agtgtcatag gacaagataa ggccttaagt gctttagcta
    16021 gagccattaa acgtaacaaa gcagggctta atgcggacaa taaacctata ggaagctttt
    16081 tatttttagg gccaacaggg gtaggaaaaa cacaatcggc taaagctttg gcaaaatttt
    16141 tatttgatga tgaaaaagca atgattcgct ttgatatgag tgaatttatg gaaaaacata
    16201 gtgtttcaag actcttaggt gcgcctccag gatatatagg acatgaagaa ggtggagagc
    16261 ttactgaagc cgtacgaaga aaaccttata gcgtgctttt gtttgatgaa gttgaaaaag
    16321 cacataaaga tgtatttaat gtgcttttag ggattttaga tgatggtaga gcaaccgata
    16381 gcaaaggtgt aacagtggat tttaaaaata ccattatcat tctaacttct aatatcgcct
    16441 caaacgctat tatgaattta agcggaaaag aacaagaaga tgcggtaaaa aatgagttaa
    16501 aaaatttctt taaacctgag tttttaaacc gtttagatga tattatcacc tttaatccac
    16561 ttggaaaaga tgaagcttat gaaatagtca agcttttatt taaagattta caaatgagct
    16621 tagaaaacaa gggaataaaa gcaagtttaa gcgaaaatgc agccctttta atcgctaaag
    16681 atggttttga ccctgatttt ggtgctagac ctttaaaaag agctatttat gatcttatag
    16741 aagataaatt aagcgatatg atacttgctg atgaacttca tgaaaatgat agcattatca
    16801 ttgatgcaaa agatgatgaa ataatcatca aaaaagctta atcattttga aagtagatct
    16861 ttctactttc aaaatataat ctcgctttca ttaaatttca tatttgcttt tggtaatggt
    16921 gatttggtgg tataataagc actttctcct ttataatttc cacgataaac tccattagga
    16981 atgctaaatt ttctagttgt atcagggaat ttttctatat attgagttaa aaattctcta
    17041 aacacaggag cagctgttct agccccacct tctgtataac gcataggctt gttgttatca
    17101 tttccatacc aaatgattgc ttctatttca ggcgtaagtc cacaaaacca agcatcaaca
    17161 cttttattcg ttgttcctgt ttttcctgct atttctatat cttttactct tgcattacgc
    17221 cctgtgcctt tttcaacaac atttctcatc atatctaaaa ccagaaaact ttgcgcttca
    17281 tcgctgactt tacgctcatt tgagttaaat tccatgatgg ttttaccagt tttatcctga
    17341 acttgtctga taatttgagg atctttaatc gtaccatagt tcccaaacat ggtataaaat
    17401 ttcgaatact ccaaaggaga aataccaaaa cttcccaata cgattgataa attaggcggt
    17461 atatctttaa atccaaattc cattagttta gagtaaagaa catcaagccc catatcaagt
    17521 gcgagattaa tggtagctaa atttcttgat cttgttaaag cttcttttaa ggtaattaaa
    17581 cctaaaaatt tacccccttc atttttaggt ttccaatcct cattattacc cgctccacct
    17641 tcaaaaattc tagaaatatc agcaatttca ctcataggcg aatatcctaa attaatcgcc
    17701 acttgataca caaaaggttt aaaagagctt ccaggttgac gcatactttg agtagcacgg
    17761 ttataattac ttttttcata atcaactcca cctaccaaag ctaaaacatc accactttga
    17821 tgatttacca cgaccatagc tccgtttaaa gtgcttaaat ttgcatcttt atcacgtttt
    17881 actatctcat cataaccaaa ttttaaagca ttctgtgcca tattttgaac atctaagtct
    17941 atatttaaaa tgattttata tccacctgtt tttaagtctt tgatattagg gcttaattgt
    18001 ttaatcactt catctacgac ataaggagca gcattttgag taagcgtatc atcataaact
    18061 tgcggaattt ctttaatggc tgtatcataa tctgcttttg aaatccaacc tagattatac
    18121 attcttgaaa taacattatt tgctcttgaa atggaaagat ctaaatgctt tgtaggatca
    18181 taactgctag gtgcttttgg catacctact aacatagcaa tctctttaag gcttaattca
    18241 tttaaatttt tatgaaaata ccccaaagct gcggttttta ctccataata cccatgtcca
    18301 aaaaagataa aatttaaata cctttctaaa atttgctctt tagttaaaat ggtttccatt
    18361 ttataagcaa gcaaagcttc tcgaatttta cgcgtaatag ttctttctgg ggttaattct
    18421 gtgtttttaa taaattgctg ggtaagagtg gaagctcctt ccatggtttt tccaccgctt
    18481 tttatgattt ttacagcagc tctaaaaatg gcatcgatat taactccatt atgttcaaaa
    18541 aagcttgtat cttctatagc aactaaagct tctataaggc gtggaggaag ctcttcataa
    18601 ggagcgtaaa aacgatgctg ttcaaaaata ttagccacaa gcttgccatt tctatcataa
    18661 atttgtgttg taagaggagg tttgtattct ttgaaagtat aaccctcagt atcagcactt
    18721 gtgaaaagat aagccacata aataaatcca gctataaaca aaagagtaaa aaatgaaaaa
    18781 atatatttta atattttcat aaataagcct ttaaagtttg gatatcaagc cctaaagcag
    18841 tgcttagatt tcctacttgt tgggtgatga aattttgatg aaaaccctca cacataatac
    18901 aacccgcctt gcctttataa agatcatttt ctacataatc tcttaaagca ttttcatcaa
    18961 aatttttaaa ataaagcgta gtttttgaaa gagaaaaaac tcttttttca ggttttacaa
    19021 gcaaaaaagc cgataaaata cttgcatact tgccattttg caaggcaagc atttcataag
    19081 cttctttttt atcctttgct ttggtaagaa ttttttcatc tatacaaact atactatctg
    19141 caaaaagcaa attttggttt tgaaaatctt tgcctaaagt acttaaaaat tgtctttctt
    19201 tttcaagaac tattttttga acatataaaa aaggtgaaat atttttattt aaattttcat
    19261 cataatcaaa actaacttgc ctaaaatcaa tctttgcggt tttaagcaag ttagctcttg
    19321 aaatggaact tgaagcaaga attaacatta aagtgctttt tctatcgttt ctaagctttg
    19381 ttttaaagct tcattgattt tgcttaaatc ttttccacct gcagtagcaa aatcatctct
    19441 tccgccacca tttccaccta aaatttgcgc cgcttcttta accaaagctc ctgcttttaa
    19501 aggcacatct ttaacgccag ctgctaaagt gattttttca tcttttactt ggataagtaa
    19561 aatcaccgct ttagcaaatt tgtttttaaa atcatcaatc atagctttaa tatcgccatt
    19621 atctatacgt tttacgcaaa tttcaacacc ttggatattt ttagaatcaa gctcggtttt
    19681 acttgaattt ttaagctcat tttttaaact taaaatttca tttttaagct ttttaatccc
    19741 gcttaaaata tcattatttt taagttcatc ttttacttta gaaagttctt cgagttgatt
    19801 ttttacaaat tctaaagccg ctttagaaac cacagcttca atacgtctaa ctccagcact
    19861 cacaccactt tctttaacta tgtaaaaact tcctatttga gcagtatttt taacatgagt
    19921 tcccccgcaa agttctttgc tttcacctag agttaaaaca cgcacattgc cttggtattt
    19981 ttcattaaac aatgctatag caccgctttt tttagcttct tctaaaggca tattttctaa
    20041 gatagcttcg cttgagttta taatcatttc attgactctt ttttcaatgc tttctagctc
    20101 ttctttgttt aaagctttat gatgagtaaa atcaaatctt agtttattgc tttcaaccaa
    20161 agatcctgct tggcttacat gagaacctaa aatttctctt aaagcatgat gtaaaagatg
    20221 agtggctgag tggtggcgtg cgatttgctc tcttttttct gtatcgattc ttgcatgaac
    20281 tatatcgtta acttttagtt cttcgcctgc ttttataaag ctaagattga gattaaaaaa
    20341 cttttgcgta tctaaaactt cacgcttagc tataaatcca ctatcagcac tttgcccccc
    20401 acttgttgca taaaaaggtg tgttttcaag catcacccaa cccgcatctt taagggtgga
    20461 aacttcttta aaatcttcat ctaaaagggc taaaatttta ctttcgcatt ctgctttttc
    20521 ataacctacg aaatgatttt ctccaaattt ttcaagtaag tttttaaaat ctccacttgc
    20581 agttttatct ccacttcctt tccaagaagc tttagcgcgt gctttttgct cgttcattaa
    20641 aagttcaaat ttttcttcat caactttaag gtttttttcc cttagcatat cagccgttaa
    20701 atcaagcgga aaaccataag tatcataaag tttaaaggct acttctccgc taaaaatttc
    20761 tttagtgttt ttaagctctt cattaaaaat ttcaatccca ttttctatag tacttaaaaa
    20821 tctttcttct tcaaggcgaa tttgttcttt tataaagtct tttttctcat taagataggt
    20881 ataatgtccg cccattaaat cgcacacaac atcaactagt ttatacataa aagcttgttt
    20941 aaaacctagc aaatatccat gtcttaaagc acgacgcaaa atacgacgca aaacataacc
    21001 tctaccttct ttatcaaaac ttaccccttg cgcaagtaaa aatacgcttg atcttatatg
    21061 atcagctatg actctaaaac ttgctccact ttcataaaca taagttttgt tacaaagttt
    21121 tgaaatttca ttgatgattg gcataaaaag cgagctatca aaattgctaa atttaccttc
    21181 tttaatcgct gttacccttt caagccccat tcctgtatca atacttggct ttggtagtgg
    21241 gctaagcact ccattggcac ttctttcata ttgcataaaa acaagattcc agatttctaa
    21301 aaatctatct ccatctccgc ccatataatc ttcgcttgag ttaaaatgct cttgtccttg
    21361 gtcataaaaa atctcactac aaggaccaca aggaccagta tcgcccattt gccagaagtt
    21421 atctttatcg ccaaatttgt aaattctttc tttttgaatg tgtttttgcc atagattaaa
    21481 agcttcatca tcgttttcat gcacagttac ataaagtcta tctttaggta gttttaaaac
    21541 ttcagttaca aattcccaag cataagctat ggcttgttct ttaaaataat ctccaaaact
    21601 aaaattccca agcatttcaa aaaaagtatg atggcgtgcg gtatatccta cattatctaa
    21661 gtcattgtgc tttccacccg ctcttataca agtttgacag cttgttttgc gtggagggtt
    21721 tgggcgtgga atttctcctg taaatatact tttaaaaggc accatacccg cattggtaaa
    21781 aagtaaagtt gcatcatcag gaactaaagg acttgacggg gttatctcat gtccttttga
    21841 tgcaaaaaaa tccaaataag cttttctgat atccatgaat tttcctaaag aaatttttat
    21901 aaaaacatat cataccaaaa ttactttaaa ttaagtaaaa ctaaaataca ataaacattt
    21961 ttatttaatt ttatttctct aaggtttttt atgaatttta tcaatcttca agcccaatat
    22021 ctcgcataca aagatgaaat caatgctgaa attgaaagcg ttttatcaag ttcttctttc
    22081 ataggcggtg caaagcttaa cgaatttgag caaaatttag ctcatttctt aggtgttaaa
    22141 cacgctatag gttgctcaag tggaactagt gctttatacc ttgccttaag agtcttagat
    22201 attggtaaag atgatgaagt tatagtgcct agttttactt tcatagcaac agctgaagtt
    22261 gtggccttgg taggtgcaaa acctgttttt gtagatataa atttatcaaa ttacaatctt
    22321 gattttaaag cagtgcaaaa agcaataact ccaaaaacta aagctgttat agcagtgagt
    22381 atgtttggac aaatgagtga tttaagggct ttagaagaaa ttttaaaaga taaaaatatc
    22441 actttgatcg aagatggtgc acaaagtttt ggcgcaagtt tcaaaggaga aaaatcctgc
    22501 tctatagcta aaatttcatg cacaagcttt tttccttcga agcctttggg agcttatggc
    22561 gatggcgggg ctattttttg ccatgatgat gaaattgcta aaaaaataag aattttactc
    22621 aatcacggac aaactcagcg ttataaacat gaatttatag gtataaatgg acgccttgac
    22681 accttacaag cagcgatttt aaatgttaag ttaaaatacc tagaaaaaga attagacaaa
    22741 agacaaaaat tagcacaaat ttataatgca aatttaaaaa actgccaaat tccacaaatt
    22801 aatccaaatg cttttagcgc ttatgcacaa tacagtgttt tagttgaaga tagagctagt
    22861 gtattgcaaa aatttgaaaa agctaatata ccttatgcta tacactatcc aacccctttg
    22921 cataaacaac cttgctttag tgagttttca aatttagaac ttaaaaattc agaatacgca
    22981 agcgaacaca tcttatcttt gcctttttca ccttttttaa gtgaagaaga gcaagagcaa
    23041 gttatttgta tttttaaaga ttgattccat gaaaataggt atcataggcc ttggaaaaat
    23101 ggggcaaaac cacttaaatg aacttagtaa aaattctcat tttaaactta atgcactttt
    23161 tgatctttgc aaaaatccaa acctaaatat ttttgatgat attttttatg atgatttgga
    23221 taaattttta aatcaaaata atgatattat catcatagca acacctacaa attcacattt
    23281 agcaatagca aaaaaagttt ttaaacaatg caaatgcgtt ttaatcgaaa agcctttagc
    23341 tctaaattta aaagaaatag acgaaatttc aaatttagct aaagaataca gcataaaagt
    23401 aggtgtaggt ttttgcgaaa gatttaatcc tgcggtttta gccctaaaaa aagagcttga
    23461 aaatgaagaa attatcagca ttaacataca aagattttca ccctacccac aaagaatcag
    23521 cgatgtaggg attttgcaag atttggctgt gcatgatctt gatttgcttt gttttttaag
    23581 caaacaagaa ataacaaaaa ccaatttgct taaaaaatac acccaagatc aaacaagaga
    23641 aagtgaaagc attattctat gtgagcttga aaaatgtatt gctagcatac atcaaagttg
    23701 gaatagcaca caaaaactaa gaaaaattca tcttattact aaaaatcatt tttatgaagc
    23761 caatttaaat gacttttctt tattaaaaga tggaaatttt atagaactta ctcaacaaag
    23821 tccacttttt tcagaacacg aagctttgtt aaaatttatc gataatcaac caaatcattt
    23881 agccagcacg agcgatgctt acaaagttca agaaatttta gaaaggtttg cgtgaaatta
    23941 gttttatttt taaatatggg cggagctacg aatttacaag attgtgaagt ttttttaaaa
    24001 aatatgttta atgatcctta tattttagga atcaaaaatc gatttttaag aaaatttgta
    24061 gcatggatca taacaaaggc tcgcgttaaa gccatgcaag aaaactataa aaaaatgggc
    24121 ggaaaatccc ctttaaacga acttactcaa agcctgtgtg acaagcttaa tttaaaacaa
    24181 gatgaattta aatttgattt tgtaaatctt tatgttcctc cttttgccac agaaattttg
    24241 caaaaataca ctttaaatgc aagtgatgaa atcattcttt ttccacttta tccgcaccat
    24301 tcttgcacca cagtaacttc atctttagaa gttctgcaaa atgaaatttc aaagcaaaaa
    24361 attcaagcaa aagtaaaaac tatagatatt ttttacaaaa atgagcttta taacgagatg
    24421 atagtttcgc acattttggc taaaaaaagt aaatttgatg ccaaaatttt gattttttca
    24481 gcgcattctt taccacaaag cattattgat aaaggtgatt tatatgaaaa gcatgtaaat
    24541 gatcatgtag aaattttaaa agaaaagcta aaagatcatt ttggtgaatt tattttagct
    24601 tatcagtcta aactaggccc tgtaaaatgg cttgaaccaa atacaagcga tgttttagca
    24661 aatttaaacg ataaagcttt gatttatcct atttcttttt gcattgattg ttctgaaaca
    24721 atttttgagt taggtatgga gtataaacat ttaacaaaat gtgattatga tttgataagt
    24781 tgtcctaata atagtgatga atttatgaaa tttattttaa agtatttatc tgatcttaac
    24841 taagaatgaa tttgagatcc ttgtctatca tttttttaaa cttttttggt aaaaatttag
    24901 ccgactaaac caaagtataa gctttttctc cgtgcaaact cacatctaag cttttttgtt
    24961 ctacttcttt tttcactctt aagtctgtaa aacaagaaat gatcttaaaa aaataataaa
    25021 gcttatgaga gctaaaaaaa tcatacaaat cataatagta agaatttgct cttttaaaag
    25081 ctctaaactt ccactgataa aaaatccctc cgccaagtgc atttttggta atcacattag
    25141 gatttgcttt aacacttgca aaaagccctg tagcgattcc ttcacaaaca cctccgattc
    25201 cgtgcaaaga aaaaacatct aaagaatcat cctatttgag tttgtattta ataaaactca
    25261 aaccaaaata acaaaatgca gaagacaaag ccactataac aagagaagca taattatcta
    25321 cataaccgca agctgaagta atccctacaa gcccactaag cccacctaaa atagtcggtt
    25381 tttatagatg agccactcaa gcactaccca agataaaaag ccacaagctg ctgatataat
    25441 acttactata aaagcattga tagcaatatc attcatttcg ccagcacttc cagcattaaa
    25501 acccagccat cctataaaaa gcaaaatcac acctaagaaa gcataagaaa tagaatgcgc
    25561 gtttttatcc tcatcatcac tttttctagc acccactatc aaagctccta caagtccagc
    25621 aaccccagag ctaatataca caacaccacc cccagcaaaa tcaaggcttc ctcttttaag
    25681 taaaaaccct tcgctactcc aaatcatatg cgctaacaca tcataaacta aagtactcca
    25741 aaaaagtaaa aatatcacca aaacacccag tttaattctt ccaaccaaag agcctgttat
    25801 gatggcagat gcaataagtg caaacatcat ttgaaaaatc acaaaaagaa tatttgaaac
    25861 acctgaagca ttatatccgc taataccctc taagagaaaa ttctcgaaat ttcctacaag
    25921 cccaagtcct tcatctttgc caaaagaaaa gctaaatcca agcactaccc attgtaaaat
    25981 aatgacacca aaagcaataa agcaattcat tatggtattg agagtatttt tacttcttac
    26041 catacccgaa taaacattgc caaagttgga gttataagca aaactagtaa agtacacaac
    26101 acaataaaac ttgaatttat cgtattcatt tacttaccct ttcttacaaa atatacttgc
    26161 gagataatta tatttaaaat gatttaaaaa
//
LOCUS       DAPIWB010000015        25675 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.015, whole genome shotgun sequence.
ACCESSION   DAPIWB010000015 DAPIWB010000000
VERSION     DAPIWB010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 25675)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25675)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25675
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.015"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(85..1116)
                     /gene="rfbB"
                     /locus_tag="RJ266_000522"
     CDS             complement(85..1116)
                     /gene="rfbB"
                     /locus_tag="RJ266_000522"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HDV7354299.1"
                     /translation="MYILVTGGAGFIGSNFLLYFFEKNPDAKIINLDFLTYASNISNL
                     NKLKNNPNYVFIQGDISDVFLVNEIFSKYKINAVINFAAESHVDNSIKNPDIFIKTNI
                     YGTWNLLNSAYKTWFLEPFLKKDEFKQSFFYQISTDEVYGSLGENGKFTEDNAYAPNS
                     PYSASKASADMLVRSYHHTYGLNAVISNCSNNYGPFQYDEKLIPTIIRNALNNTQIPI
                     YGDGKNIRDWLYVKDHCVAIESIYKYAFEKIKENNSFFDVFNIGTNEEWQNIDIANKI
                     CSYLDNVLPKNTSYKEQITFVKDRAGHDRRYAIDSTKLQKTIGWKAQENFNSGLEKTI
                     KWYIEKYKG"
     gene            complement(1116..1994)
                     /gene="rfbA"
                     /locus_tag="RJ266_000523"
     CDS             complement(1116..1994)
                     /gene="rfbA"
                     /locus_tag="RJ266_000523"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002877054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HDV7354300.1"
                     /translation="MKGIILAGGSGTRLYPSTLTLCKQLLPIYDKPMIYYPISVLMLA
                     KIKEVLIISTPKDIDRFKELFKDGSFLGMQIQYKIQERPEGLAQGLILAQDFIQNDDI
                     VLILGDNIFYGQGFSDILENAKDDLKKGFASIFSYHVKDPERFGVVEMDQNGNVLSLE
                     EKPKNPKSNHVATGLYFYNNDAIDIAKNIKPSARGELEITDVNIEYLRLNKLKSQHLG
                     RGFAWIDTGTHDSLIEASSFVQTIELRQGYKIACLEEIAYNNNWIDNETLEKRALLLS
                     KSNYGQYLYKILSQGK"
     gene            complement(2005..2706)
                     /locus_tag="RJ266_000524"
     CDS             complement(2005..2706)
                     /locus_tag="RJ266_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002876132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDV7354301.1"
                     /translation="MNISIVILTFNSQKYLQEVLQSVNFANEIILIDSGSTDDSLIIA
                     KAFKNVKIFHQDWLGFGKQKQFGVEKATNDWIFVLDSDEVFTEELKEEVLQIIKNPSF
                     KAYKVARLNFFFGEAITKMGLYPDYNIRLFHKKYAKFNEREVHESIICQEKIGKLKHH
                     FLHYAYENIEQFIDKQNKYSSLNPKKNNLLKALINPYWTFFKLYFVKLGFLEGKRGFI
                     IAKLYAQYTFWKYIK"
     gene            complement(2703..3581)
                     /gene="htrB"
                     /locus_tag="RJ266_000525"
     CDS             complement(2703..3581)
                     /gene="htrB"
                     /locus_tag="RJ266_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002932656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase
                     HtrB"
                     /protein_id="HDV7354302.1"
                     /translation="MKNSDRIYLSLYYILKFFVTFMPDCILHFLALIVARIAFHLNKK
                     HRKIINTNLQICFPQYTQKERDKLSLKIYENFAQFGIDCLQNQNTTKEKILNKVNFIN
                     ENFLIDALALKRPIIFTTAHYGNWEILSLAYAAKYGAIAIVGKKLKSEIMYEILSQSR
                     TQFDIELIDKKGGIRQMLSALKKGRTLGILTDQDCAENESVRLKFFNKEVNYQMGASL
                     IAQRSNALIIPVYAYKEDGKFCIEFFKAKDSQNASLEELTLYQAQSCEEMIKKRPWEY
                     FFFHRRFASYNQGIYS"
     gene            complement(3571..4599)
                     /gene="waaC"
                     /locus_tag="RJ266_000526"
     CDS             complement(3571..4599)
                     /gene="waaC"
                     /locus_tag="RJ266_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HDV7354303.1"
                     /translation="MKIAIVRLSALGDIIQSAVVLQFIKNFKKDIEIHWFVDEKFEGI
                     LKNHPLINKLYALPLKDKKILKSLKILLKARKNNYNAVIDLQGLIKSAIVSRILSRNN
                     FGFDKNSLKESFAHNFYNQKLELDYNENVFVRYLSLTSFMLNTDFNVKNLAFKQDIFS
                     VDENLKQLLNNKLKLDKNEKNILIHVGSSVENKIYPKTKLAILCKLLINEFQQTKIWL
                     AWGNVKEYEFAKEVLNLSGIDETHIELAPKFNLEELMAFTKMMDLIIGNDSGPTHLAF
                     ALNKASITIFGATPSYRNAFQTHINKIIDTGKKIQNAKHIDKSDFCITRIEEEDIFKL
                     AKGLLNEK"
     gene            4666..5460
                     /locus_tag="RJ266_000527"
     CDS             4666..5460
                     /locus_tag="RJ266_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HDV7354304.1"
                     /translation="MAKNEGYICVFDCESVPDVELIRKTLGFEGSDLEVSLKALQWQK
                     EQSGSEFLPLPYHKIISICAVLSDNFGKFIKVNKIDGQNEKEMIANFFNFIENYEPKL
                     VSFNGKNFDMPVLVLRALKYNLKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGSNG
                     RGIKLDTLCSMVGLPGKYDVHGDEVMKLFYEDELEKIHEYCESDVLNTYMLFLKYELI
                     KANVSEEDYVDFLSYMRDFLRSKKSDRSYTEVFVKACESEISKVRS"
     gene            5518..6504
                     /gene="galE"
                     /locus_tag="RJ266_000528"
     CDS             5518..6504
                     /gene="galE"
                     /locus_tag="RJ266_000528"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HDV7354305.1"
                     /translation="MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDL
                     QKIRAFKFFEQDLSDFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNT
                     TNLIETCLQTGVNKFIFSSTAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDA
                     SMANPEFKHCILRYFNVAGACMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDY
                     DTKDGTCIRDFIHVDDISSAHLAALDYLKENESNVFNVGYGHGFSVKEVIEAMKKVSG
                     VDFKVELAPRRAGDPSVLISDASKIRNLTSWQPKYDDLELICKSAFDWEKQC"
     gene            6498..8192
                     /gene="pglK"
                     /locus_tag="RJ266_000529"
     CDS             6498..8192
                     /gene="pglK"
                     /locus_tag="RJ266_000529"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-type lipopolysaccharide transporter PglK"
                     /protein_id="HDV7354306.1"
                     /translation="MLKKLFFILSKEDKNFLFFLLVFSVFISFIETFAISLVMPFITL
                     ASDFSYFDRNKYLISLKEYLNIPVFEIIVYFGVGLIVFYVFRALLNAYYFHLLARFSK
                     GRYHAIAYKVFSKFLNINYEKFTQKNQSEILKSITGEVYNLSTMISSFLLLMSEIFVV
                     LLLYALMLLINYKITLFLSIFMVLNAFILVKILSPIIKKAGVRREEAMKNFFEILNTN
                     LNNFKFIKLKTKEDGVLSLFKAQSEAFSKANITNESVAAVPRIYLEGIGFCVLVFIVV
                     FLVLKNESDISGILSTISIFVLALYRLMPSANRIITSYHDLLYYHSSLDIIYQNLRQE
                     EENLGEEKLSFNQELKICNLSFGYEGKKYLFKNLNLNIKKGEKIAFIGESGCGKSTLV
                     DLIIGLLKPKEGQILIDEQELNANNTKNYRQKIGYIPQNIYLFNDSIAKNITFGDAVD
                     EEKLNRVIKQANLEHFIKNLPQGVQTKVGDGGSNLSGGQKQRIAIARALYLEPEMLVL
                     DEATSALDTQSEAKIMDEIYKISKDKTMIIIAHRLSTITQCDKVYRLEHGKLKEEK"
     gene            8189..9268
                     /gene="pglH"
                     /locus_tag="RJ266_000530"
     CDS             8189..9268
                     /gene="pglH"
                     /locus_tag="RJ266_000530"
                     /EC_number="2.4.1.292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-
                     diNAcBac-PP-undecaprenol
                     alpha-1,4-N-acetyl-D-galactosaminyltransferase"
                     /protein_id="HDV7354307.1"
                     /translation="MMKISFIIATLNSGGAERALVTLANALCKEHEVSIIKFHAGESF
                     YKLENEVKVTSLEQFRFDTLYHKIASRFKKFFALRKALKESKSDVFISFLDTTNIACI
                     AAKIGLKTPLIISEHSNEAYLKPKIWRFLRRVSYPFCDALSVLGSSDKVYYERFVKRV
                     KLLLNPCHFSDEISFDSSFEKENLVLFIGRLDHNKNPVMFLKAIAHLDKNLQENYKFV
                     IAGDGQLRQELEYKVKSLGIKVDFLGRVENVKALYEKAKVLCLCSFVEGLPTVLIESL
                     YFEVCRISSSYYNGAKDLIKDNHDGLLVGCDDEIALAKKLELVLNDENFRKELVNNAK
                     QRCKDFEISHIKEEWLKLIAEVKNA"
     gene            9261..10190
                     /gene="pglI"
                     /locus_tag="RJ266_000531"
     CDS             9261..10190
                     /gene="pglI"
                     /locus_tag="RJ266_000531"
                     /EC_number="2.4.1.293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GalNAc(5)-diNAcBac-PP-undecaprenol
                     beta-1,3-glucosyltransferase"
                     /protein_id="HDV7354308.1"
                     /translation="MPKLSVIVPTFNRQVLLEKAIKSIQNQDFKDLEIIVSDDNSSDD
                     TKSVVQNLQKDDDRIKYFLNQNYKQGPNGNKNNGLDQASGEFVTFLDDDDELLSGALS
                     TLMQKANEGYAHVFGNCLIEKEGNLSKEFSGKGLEKDSEISKKDFLMAKFSGEFFSVF
                     KKSLLENKRFNEEFYGNEATLWVNLYKEKSFYIHKAFRIYRIFRQDSVTLGASKNAYR
                     VYLGYLELAKILENELRMSKDKDYKKTCASYYKMAAYYAKLAKNYKALYKCLFKSLSI
                     KINAPALILLILSIIPNNMIEKLSKIRVALCKN"
     gene            10178..11275
                     /gene="pglJ"
                     /locus_tag="RJ266_000532"
     CDS             10178..11275
                     /gene="pglJ"
                     /locus_tag="RJ266_000532"
                     /EC_number="2.4.1.291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylgalactosamine-N,
                     N'-diacetylbacillosaminyl-diphospho-undecaprenol
                     4-alpha-N-acetylgalactosaminyltransferase"
                     /protein_id="HDV7354309.1"
                     /translation="MQKLGIFIYSLGSGGAERVVATLLPILSLKFEVHLILMNDKISY
                     EIPECQIHFLECSKPSENPILKFLKLPFLALKYKKLCRNLGIDTEFVFLNRPNYIALM
                     ARMFGNKTRLVINECTTPSVMYMKNNFNSLVNKFLISLLYPKADLILPNSKGNLEDLV
                     QNFSISPKKCEILYNAIDLENIGQKALEDIALKDKFILSVGRLDKGKNHALLIRAYAR
                     LKTDLKLVILGEGVLKDELLALIKELNLEEKVLLLGFDNNPYKYMAKCEFFAFASVFE
                     GFSNVLIESLACSCAVVCTDHKSGARELFGDDEFGLLVEVDNENSMFQGLKTMLEDDK
                     LRKAYKNKAKTRAKAFDKVKIARDALKYLLG"
     gene            11279..13420
                     /gene="pglB"
                     /locus_tag="RJ266_000533"
     CDS             11279..13420
                     /gene="pglB"
                     /locus_tag="RJ266_000533"
                     /EC_number="2.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphooligosaccharide--protein
                     glycotransferase"
                     /protein_id="HDV7354310.1"
                     /translation="MLKKEYLKNPYLVLFAMIILAYVFSVLCRFYWIWWASEFNEYFF
                     NNQLMIISNDGYAFAEGARDMIAGFHQPNDLSYYRSSLSTLTYWLYKITPFSFESIIL
                     YMSTFLSSLVVIPIVLLANEYKRPLMGFVAALLASVANSYYNRTMSGYYDTDMLVIVL
                     PMFILFFMVRMILKKDFFSLIALPLFIGIYLWWYPSSYTLNVALIGLFLIYTLIFHRQ
                     EKIFYIAVILSSLTLSNIAWFYQSAIIVILFALFALEQKRLNFMIIGILGSATLIFLI
                     LSGGVDPILYQLKFYIFRSDESANLTQGFMYFNVNQTIQEVENVDFSEFMRRISGSEI
                     VFLFSLFGFVWLLRKHKSMIMALPILVLGFLALKGGLRFTIYSVPVMALGFGFLLSEF
                     KAILVKKYSQLTSNVCIVFATILTLAPVFIHIYNYKAPTVFSQNEASLLNQLKNIANR
                     EDYVVTWWDYGYPVRYYSDVKTLVDGGKHLGKDNFFPSFALSKDEQAAANMARLSVEY
                     TEKSFYAPQNDILKTDILQAMMKDYNQSNVDLFLASLSKPDFKIDTPKTRDIYLYIPA
                     RMSLIFSTVASFSFINLDTGVLDKPFTFSTAYPLDVKNGEIYLSNGVVLSDDFRSFKI
                     GDNVVSVNSIVEINSIKQGEYKITPIDDKAQFYIFYLKDSAIPYAQFILMDKTMFNSA
                     YVQMFFLGNYDKNLFDLVINSRDAKVFKLKI"
     gene            13430..14560
                     /gene="pglA"
                     /locus_tag="RJ266_000534"
     CDS             13430..14560
                     /gene="pglA"
                     /locus_tag="RJ266_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,
                     N'-diacetylbacillosaminyl-diphospho-undecaprenol
                     alpha-1,3-N-acetylgalactosaminyltransferase"
                     /protein_id="HDV7354311.1"
                     /translation="MRIGFLSHAGASIYHFRTPIIKALKDRKDEVFVIVPQDEYTQKL
                     RDLGLKVIVYEFSRASLNPFVVLKNFFYLAKVLKNLNLDLIQSAAHKSNTFGILAAKW
                     AKIPYRFALVEGLGSFYIDQGFKANLVRFVINNLYKLSFKFVHQFIFVNESNAEFMRN
                     LGLKENKICVIKSVGINLKKFFPIYVESEKKELFWKNLNIDKKPIVLMIARALWHKGV
                     KEFYESATMLKDKANFVLVGGRDENPSCASLEFLNSGAVHYLGARSDIVELLQNCDIF
                     VLPSYKEGFPVSVLEAKACGKAIVVSDCEGCVEAISNAYDGLWAKTKNAKDLSEKISL
                     LLEDEKLRLNLAKNAAQDALQYDENIIAQRYLKLYDRVIKNV"
     gene            14553..15155
                     /gene="pglC"
                     /locus_tag="RJ266_000535"
     CDS             14553..15155
                     /gene="pglC"
                     /locus_tag="RJ266_000535"
                     /EC_number="2.7.8.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl phosphate
                     N,N'-diacetylbacillosamine 1-phosphate transferase"
                     /protein_id="HDV7354312.1"
                     /translation="MYEKVFKRIFDFILALVLLVLFSPVILITALLLKITQGSVIFTQ
                     NRPGLDEKIFKIYKFKTMSDERDEKGELLSDELRLKAFGKIVRSLSLDELLQLFNVLK
                     GDMSFVGPRPLLVEYLPLYNKEQKLRHKVRPGITGWAQVNGRNAISWQKKFELDVYYV
                     KNISFLLDLKIMFLTALKVLKRSGVSKEGHVTTEKFNGKN"
     gene            15142..15729
                     /gene="pglD"
                     /locus_tag="RJ266_000536"
     CDS             15142..15729
                     /gene="pglD"
                     /locus_tag="RJ266_000536"
                     /EC_number="2.3.1.203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylbacillosamine N-acetyltransferase"
                     /protein_id="HDV7354313.1"
                     /translation="MARTEKIYIYGASGHGLVCEDVAKNMGYKECIFLDDFKGMKFES
                     TLPKYDFFIAIGNNEIRKKIYQKISENGFKIVNLIHKSALISPSAIVEENAGILIMPY
                     VVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVL
                     PNLSLADDSILGGGATLVKNQDEKGVFVGVPAKRM"
     gene            15686..16339
                     /locus_tag="RJ266_000537"
     CDS             15686..16339
                     /locus_tag="RJ266_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354314.1"
                     /translation="MKKVFLWEYLQKGCKLHFNNNLVVHYIVNPSPLGWIVINLLTIC
                     LICYIFPLKNSLKHKKLFSLKANVNSKNSRIIKYTGIAAFLGGLIGIWYNFEGFYQLL
                     FFFELENENLKTLWSLQVSVSSVITGMLLLLIYVINLAMVCENGIYIVSKFNLFYMYF
                     IKREDLEIVKIEKMKFLNQVEVCFVIKTKNKILLKCFESIYKKEDLEKLKNWYENKL"
     gene            16435..17595
                     /gene="pglE"
                     /locus_tag="RJ266_000538"
     CDS             16435..17595
                     /gene="pglE"
                     /locus_tag="RJ266_000538"
                     /EC_number="2.6.1.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylbacillosamine transaminase"
                     /protein_id="HDV7354315.1"
                     /translation="MRFFLSPPHMGGNELKYIEEVFKSNYIAPLGEFVNRFEQSVKAY
                     SKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICYLKAKPVFIDCD
                     ETYNIDVDLLKLAIKECEKKPKALILTHLYGNAAKMDEIVEICKENEIVLIEDAAEAL
                     GSFYKNKALGTFGEFGAYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLH
                     YEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGECFSFLDELENS
                     RSNRWLSTALIDFDKNELNSCQKDINISQKNITLHPKISKLIEDLKNEQIETRPLWKA
                     MHAQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIKA"
     gene            17597..19369
                     /gene="pglF"
                     /locus_tag="RJ266_000539"
     CDS             17597..19369
                     /gene="pglF"
                     /locus_tag="RJ266_000539"
                     /EC_number="4.2.1.135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (configuration-retaining)"
                     /protein_id="HDV7354316.1"
                     /translation="MIFYKSKRLAFFLTSDIVLILLSVYLAFSLRFSGDIPSIFYHGM
                     MVSAIILLVLKLSFLFVFRIYKVAWRFFSLNEARKIFIALLLAEFCFFLIFYFFSDFF
                     NPFPRSAIVIDFVLSYMFIGTLRISKRMLVDFKPSRMKEEETPCIVVGATSKALHLLK
                     GAKEGSLGLFPVGVVDARKELIGTYCDKFIVEEKEKIKSYVEQGVKTAIIALRLEQEE
                     LKKLFEELVAYGICDVKIFSFTRNEARDISIEDLLARKPKDLDDSAVAAFLKDKVVLV
                     SGAGGTIGSELCKQCIKFGAKHLIMVDHSEYNLYKINDDLNLYKEKITPILLSILDKQ
                     SLDEVLKTYKPELILHAAAYKHVPLCEQNPHSAVINNILGTKILCDSAKENKVAKFVM
                     ISTDKAVRPTNIMGCTKRVCELYTLSMSDENFEVACVRFGNVLGSSGSVIPKFKAQIA
                     NNEPLTLTHPDIVRYFMLVAEAVQLVLQAGAIAKGGELFVLDMGKPVKIIDLAKKMLL
                     LSNRNDLEIKITGLRKGEKLYEELLIDENDAKTQYESIFVAKNEKVDLDWLNKEIENL
                     QICEDISEALLKIVPEFKHNKEGV"
     gene            19369..20262
                     /locus_tag="RJ266_000540"
     CDS             19369..20262
                     /locus_tag="RJ266_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDC sensor domain-containing protein"
                     /protein_id="HDV7354317.1"
                     /translation="MYIKDIQRFEDNRYRARAYMSYILTRNLPNKLPDIHLETIKTAL
                     DKIAHEVVVFDALYILDISGMQIENAISLNKAHEIGQGEDRSTRSYFYRAVKLRRCVL
                     SDPYPSVLNNELCVTASMPIYDDKNNLLFVVCIDIKLEDILKIIQAGKFEFVFTQFSR
                     LVYFCFALVLFVITCFLFQKGFFSLFDNQAIGIEHMFESTIAITLALAIFDLAKTLIE
                     QEVLGRTKKEEGGIQKTMVRFLGSIIIALAIEALMLVFKLAIGDLSQMIYAIYLIGGV
                     SLLLLGLSVYLFTVKYKNNNI"
     gene            20375..20767
                     /locus_tag="RJ266_000541"
     CDS             20375..20767
                     /locus_tag="RJ266_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator CheY"
                     /protein_id="HDV7354318.1"
                     /translation="MKLLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKN
                     EDVKVLITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNY
                     IVKPFTPQVLKEKLEDVLGTGSGEGAAE"
     gene            20790..21635
                     /locus_tag="RJ266_000542"
     CDS             20790..21635
                     /locus_tag="RJ266_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HDV7354319.1"
                     /translation="MQKKYYELFFIVEEQYKNLFLDFAFDLGIEAIEEKDNGVYIRSH
                     ESLEEFSWALEIFAQKLTTTFNLNHKIISNLSLVEKENKDWIQEYKKGIKPILVDNVY
                     IHTTWQEEKKNCINIKINPALAFGSGHHESTYSCVKFLQKFSKSKLRALDLGCGSGIL
                     GIIMAKFGCNVEICDTDELAIDSSLENARLNGVDFHKAWCGSIDKANGLYNLIVANII
                     ADVILILEKDIKNHLEDNAILILSGILDKYSTRIKEKFQDLELIDEMQINEWCSFVYK
                     NNKKG"
     gene            21639..23576
                     /gene="ftsH"
                     /locus_tag="RJ266_000543"
     CDS             21639..23576
                     /gene="ftsH"
                     /locus_tag="RJ266_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HDV7354320.1"
                     /translation="MNNNTQNNKGNPQGNNFFNKNPIFIFAIFAIIMIIIFKGFFDGN
                     GSFGGALNGNEVNKNVPYSELKKLIESGQINQVSIGQTTIKAISSSHNTVYTAKKVND
                     PELVSLLDSKNIAYGAYSETNWFTDILFSWVLPVFIFFGIWMFLASRMQKNMGSSILG
                     IGSSKKLVNSEKPKVKFSDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLLLVG
                     PPGTGKTLLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFI
                     DEIDAIGKSRAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAA
                     LLRPGRFDRQVLVDKPDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLANI
                     INEAALLAGRDSKKYVEQNDLVEAVERAIAGLEKKSRRINEKEKKIVTYHECGHALIA
                     ETTKGAKRVSKVSVIPRGLAALGYTLNTPEENKFLMQKHELIAEVDVLLGGRAAEEVF
                     IGEISTGASNDLERATDIIKAMISMYGMSEIAGLMVLEKQRNTFLSGGQTIKDYSEKM
                     AESLDDYVKKTLDERYKDVKDTLNTYKGAIETMVAALYEEETIEGNKVREIIKEFEDQ
                     NSLPTRLQELEEVKTEVKVEE"
     gene            23573..24190
                     /locus_tag="RJ266_000544"
     CDS             23573..24190
                     /locus_tag="RJ266_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDV7354321.1"
                     /translation="MKDFIAKYGYLSLIILSLIFIFVWIFYSFSILLLALIVICIFLF
                     RAPKRELVCSDEKAIFAPMDGRVTKIENIHHKDLGECVEIAIKNALYDAGNFNTPFAM
                     SIIDIRLRHGLFLCSELKSAKMMNERAFILAKVKENKTIALRIYAGSFDRKLKLDNIS
                     HDLKAGDRMGFLINGSISLLLPKDTRIHIGLNDEIKAGSLLGYFA"
     gene            24200..24928
                     /gene="pssA"
                     /locus_tag="RJ266_000545"
     CDS             24200..24928
                     /gene="pssA"
                     /locus_tag="RJ266_000545"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HDV7354322.1"
                     /translation="MNNRPQLIYILPNLFTAASAFLGVISIIASIHGNYYTALIYIIL
                     SLICDGLDGRVARLTNSTSKFGVEFDSLADLVAFGVAPAVLFYMAIGYDFGKLGSLIT
                     AFFVVFGAIRLARFNVTTGTYEPSVFIGLPIPTAAVVSTIWTYAFISYDFLKPYGVVF
                     LVLQAILGLLMVSNIRYPSFKKLDFNRSSVLKVLIILIIIFSFLYLYPLESLVILASL
                     YVLYGIIRVLYTIIVSKFKIRNQE"
     gene            complement(24919..>25675)
                     /locus_tag="RJ266_000546"
     CDS             complement(24919..>25675)
                     /locus_tag="RJ266_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HDV7354323.1"
                     /translation="EKNITIKFHSFQNFYEDFKSHKFNFNHEHQSIFKKNTSQQITLL
                     HPTRIRRPKFVNSTHALAKIIHSVAHIEFNAINLALDASYRFKNLPLQFYYDWLEVAD
                     EEIKHFKLLNSVLKELGYKYGNFPVHDNLESALEATKDSLSFRMGVVHRGLEAKGLDA
                     NPFVVQKLQSSNHSIKNLLMEYLEIILNDEIKHVKKGDTWWKFANQNRYDFIELCKTF
                     KQFSLAGKKLNIQARIKAGFTQEECEVIEKFYS"
BASE COUNT         8669 a         3083 c         4566 g         9357 t
ORIGIN      
        1 ggcagtttac atctttttga tgaacactta atgttgaatt tttactattt ataagtttaa
       61 aatttaaaat ttgataattc aatatcaccc cttatacttt tcaatatacc actttatagt
      121 tttttctaaa ccactattga aattttcttg cgccttccag cctatagttt tttgtaattt
      181 tgtagaatct atagcatatc ttctatcatg acctgctcta tcctttacaa aagtaatttg
      241 ctctttataa gaagtatttt ttggcaatac attatctaaa taagaacaaa ttttattagc
      301 tatgtctata ttttgccatt cttcatttgt tcctatatta aatacatcaa aaaagctatt
      361 attttctttt atcttttcaa aagcatattt ataaatactt tctatagcca cgcaatgatc
      421 ttttacatat agccaatctc ttatattctt accatctcca tatattggaa tttgagtgtt
      481 gtttaatgca tttcttatta tggtaggtat aagtttttca tcatactgaa aaggtccgta
      541 attgttagaa caattagaaa taacagcatt taatccataa gtatgatgat aacttctaac
      601 aagcatatca gcacttgctt ttgaagctga ataaggggaa tttggagcat aagcgttatc
      661 ttctgtaaat tttccatttt ctcccaaaga tccataaact tcatctgtac ttatttgata
      721 aaagaaactt tgtttaaatt cgtctttttt aagaaaaggt tcgagaaacc aagttttata
      781 agctgagttt aataaattcc aagttccgta tatatttgtt tttataaaaa tatctggatt
      841 ttttatagaa ttatctacat gtgattctgc tgcaaaattt ataaccgcat ttattttata
      901 tttgctgaaa atttcattaa ccaaaaaaac atcacttata tctccttgaa taaatacata
      961 attaggatta ttttttaatt tatttaaatt tgatatattg ctagcatatg ttaaaaaatc
     1021 taaatttata attttagcat ctggattttt ctcaaaaaaa tataataaaa aattactacc
     1081 tataaaacca gctccgccag taactaaaat atacattatt ttccttgact aagtatttta
     1141 tataaatatt gaccataatt actttttgaa agtaacaatg ctcttttttc tagggtttca
     1201 ttatctatcc agttgttatt gtaggctatt tcttctaagc aggcaatctt ataaccctgc
     1261 cttaattcta tggtttgcac aaacgaacta gcttctataa gactatcgtg agttcctgtg
     1321 tcaatccaag caaaacctct tcctaaatgt tgtgatttta gcttatttaa ccttaaatat
     1381 tctatattta catctgttat ttcaagttct cctcttgcac ttggttttat attttttgca
     1441 atatctatag cgtcattatt ataaaaatat aaaccagttg ccacatggtt gctttttgga
     1501 tttttgggtt tttcttccag gcttaaaaca tttccatttt gatccatttc taccactcca
     1561 aatctttctg gatcttttac atgataagaa aaaatactag caaacccttt ttttaagtca
     1621 tcttttgcat tttccaaaat atcactaaag ccttgtccgt aaaaaatatt atctcctaaa
     1681 attaatacaa tatcatcatt ttgaataaaa tcttgcgcca aaataagtcc ttgtgctaaa
     1741 ccttctggac gctcttgaat tttatactga atttgcattc caagaaaaga accatctttg
     1801 aatagctctt taaatctatc aatatctttt ggagtagaaa taatcaaaac ttctttaatt
     1861 tttgcaagca ttaaaacaga tataggataa taaatcattg gtttatcgta tataggtaaa
     1921 agttgcttgc ataaagttaa tgtgctagga taaagcctag ttccactacc tccagctaaa
     1981 ataatgcctt tcattgttgc actcctattt aatatatttc caaaaagtat attgtgcata
     2041 aagctttgct atgataaaac ctcttttgcc ttctaaaaaa cctaatttta caaaataaag
     2101 tttaaaaaaa gtccaataag gatttattaa agctttaaga aggttatttt ttttaggatt
     2161 taaactcgag tatttgtttt gcttatctat aaattgctcg atattttcat aagcataatg
     2221 taaaaaatga tgttttaatt tccctatttt ttcttgacag attatgcttt catgaacttc
     2281 tctttcatta aatttggcat attttttatg aaataatctt atgttataat caggatatag
     2341 ccccattttt gttattgctt ctccaaagaa aaaatttaat cttgctactt tgtatgcttt
     2401 aaatgatgga tttttaatta tttgtaatac ttcctctttt aattcttcag taaaaacttc
     2461 atcactatct aaaacaaata tccaatcatt agttgctttt tcaactccaa attgtttttg
     2521 ctttccaaaa ccaagccaat cttgatgaaa aattttgacg tttttaaaag cttttgctat
     2581 tattagacta tcatctgtgc ttccgctatc tattaaaata atttcattgg caaaattaac
     2641 actttgtaat acttcttgaa gatatttttg actattaaaa gttagtatta ctattgaaat
     2701 attcatgagt atattccttg attataactt gcaaagcgtc tatgaaaaaa aaagtattcc
     2761 caaggtcttt ttttaatcat ttcttcgcaa ctttgtgctt gataaagtgt cagttcttct
     2821 aagcttgcat tttgagaatc ttttgcttta aaaaactcta tgcaaaattt accatcttct
     2881 ttataggcat aaacagggat gatcaaagca ttgcttcttt gtgcgataag gcttgctccc
     2941 atttgataat tcacttcttt gttaaaaaat tttaatctta cgctttcgtt ttctgcgcag
     3001 tcttgatcgg ttaaaattcc taaagttctc ccttttttta gagcgcttag catttgtctt
     3061 atgccgcctt ttttgtcgat aagttctatg tcaaattggg tgcgactttg gcttaaaatt
     3121 tcatacataa tttcactttt taactttttc cctactatgg caatcgcacc atatttagcc
     3181 gcataagcaa ggcttaaaat ttcccagttt ccatagtgtg cagttgtgaa gataatagga
     3241 cgctttaaag ccagggcatc tataagaaaa ttttcattga tgaaatttac tttattgaga
     3301 attttttctt tggtggtgtt ttgattttgc aaacaatcaa tcccaaattg agcaaaattt
     3361 tcataaattt ttaaagacaa tttatcgcgt tctttttgag tgtattgagg aaaacagatt
     3421 tgcaaatttg tattgatgat tttgcggtgt tttttgttaa gatgaaaagc gattcttgct
     3481 acaatcaaag ctaaaaaatg caagatacaa tcaggcataa aagtaacaaa aaatttcaaa
     3541 atataataaa gactaagata tattctatca ctatttttca ttaagtaagc ctttggcaag
     3601 tttgaagata tcttcttctt ctatacgcgt gatacaaaaa tcacttttat cgatatgctt
     3661 ggcattttgg atttttttac ctgtatcaat gattttattg atatgagttt gaaaagcatt
     3721 gcggtagctt ggtgttgcac caaaaatcgt aatagatgct ttatttaaag caaaagctaa
     3781 atgtgttgga ccgctatcat ttcctatgat aagatccatc atttttgtaa aagccattag
     3841 ctcttcaaga ttaaattttg gcgctaattc tatatgtgtt tcatcaatac cactaagatt
     3901 taaaacctct ttagcaaatt cgtattcttt tacatttccc caagcgagcc aaatttttgt
     3961 ttgttgaaat tcattgatta aaagcttaca aagtatagca agtttggttt taggatagat
     4021 tttattttct acacttgagc ccacatgtat gagtatgttt ttttcgtttt tgtcgagttt
     4081 gagtttatta tttaagagtt gttttaaatt ttcatctacg ctaaaaatat cttgtttaaa
     4141 ggctaaattt ttgacattaa aatcagtatt taacataaag gaggtaagac ttaagtatct
     4201 tacaaataca ttttcattgt aatctaactc aagtttttgg ttgtagaaat tatgagcaaa
     4261 actttcttta agactatttt tatcaaaacc aaaattattt ctacttaaaa ttcgacttac
     4321 aatagcagat tttatgagcc cttgtagatc tattactgca ttatagttgt tttttcttgc
     4381 tttaagaaga atttttaggc tttttaaaat ttttttgtct tttaagggca gggcatagag
     4441 tttgtttatt aaaggatggt ttttaagtat gccttcaaat ttttcatcta caaaccaatg
     4501 aatttctata tcttttttaa aatttttgat aaattgcaaa accacggcac tttgtataat
     4561 atcaccaagt gctgacaaac gaacaattgc tattttcatt aaaaagccta atattttaaa
     4621 atttttgcta tgattttagc gaaattattt aaaaaaaggt taaaaatggc aaaaaatgaa
     4681 ggttatattt gtgtttttga ttgtgagagt gtgccagatg ttgagcttat ccgcaaaact
     4741 ttgggttttg aaggaagtga tttagaggta agtttaaaag cacttcagtg gcaaaaagaa
     4801 caaagtggga gtgagttttt gcctttgcct tatcataaaa ttatcagtat ttgtgcggtt
     4861 ttaagtgata attttggaaa atttatcaaa gtaaataaaa ttgatggaca aaatgaaaaa
     4921 gaaatgattg ctaatttttt taattttata gaaaattatg agccaaaatt agtcagtttt
     4981 aatggtaaaa attttgatat gcctgttctt gttttaaggg ctttaaaata caatttaaaa
     5041 gcagcaactt atttagatac tcaaagtgat aaatggaata attataaaac aagattttca
     5101 gaattaaaac attgtgattt attagaatcc ttaggatcta atgggcgtgg aataaagctt
     5161 gatacacttt gctctatggt gggtttgcca ggaaaatacg atgtgcatgg tgatgaggtg
     5221 atgaaacttt tttatgaaga tgaacttgaa aaaatccacg aatattgtga aagtgatgtt
     5281 ttaaacacct atatgctttt tttaaaatat gaacttatta aagctaatgt tagtgaagaa
     5341 gattatgttg attttctttc ttatatgaga gattttttgc gttcaaaaaa atcagatcgt
     5401 tcttatacag aagtttttgt aaaagcttgt gagagtgaaa tttcaaaagt tcgatcttaa
     5461 gtatttaaga aaatatatta aaatttattt ttgacatttt caaaaaaagg aatgatgatg
     5521 aaaattctta ttagcggtgg tgcaggttat ataggttctc atactttaag acaattttta
     5581 aaaacagatc atgaaatttg tgttttagat aatctttcta agggttctaa aatcgcaata
     5641 gaagatttgc aaaaaataag agcttttaaa ttttttgaac aagatttaag tgattttcaa
     5701 ggcgtaaaag cattgtttga gagagaaaaa tttgacgcta ttgtacattt tgcagcgagc
     5761 attgaagttt ttgaaagtat gcaaaatcct ttaaaatatt atatgaacaa cactgttaat
     5821 acaacaaatc tcatcgaaac ttgtttgcaa actggagtga ataaatttat attttcttca
     5881 acggcggcca cttatggcga accacaaact cccgttgtga gcgaaacaag tcctttagca
     5941 cctattaatc cttatgggcg tagtaagctt atgagtgaag aagttttgcg tgatgcaagt
     6001 atggcaaatc ctgaatttaa gcattgtatt ttaagatatt ttaatgttgc aggtgcttgt
     6061 atggattata ctttaggaca acgctatcca aaagcgactt tgcttataaa agttgcagct
     6121 gaatgtgccg caggaaaacg tgataaactt ttcatatttg gcgatgatta tgatacaaaa
     6181 gatggtactt gcataagaga ttttatccat gtagatgata tttcaagtgc acatttagcg
     6241 gctttggatt atttaaaaga gaatgaaagc aatgttttta atgtaggtta tggacatggt
     6301 tttagcgtaa aagaagtgat tgaagcgatg aaaaaagtta gcggagtgga ttttaaagta
     6361 gaacttgccc cacgccgtgc gggtgatcct agtgtattga tttctgatgc aagtaaaatc
     6421 agaaatctta cttcttggca gcctaaatat gatgatttag agcttatttg taaatctgct
     6481 tttgattggg aaaaacagtg ttaaaaaaac ttttttttat tttaagtaag gaagataaaa
     6541 attttttatt tttcttgctt gttttttcag tatttatttc ttttatagaa acttttgcaa
     6601 tttctttggt aatgcctttt atcactttgg ctagtgattt ttcttatttt gatcgtaata
     6661 aatatttaat cagcctaaaa gaatatctta atatccctgt ttttgaaatc attgtttatt
     6721 ttggagtggg gcttattgtt ttttatgtgt ttagagcttt gttaaatgcg tattattttc
     6781 atcttttggc aagattttct aaagggcgtt atcatgcgat cgcttataag gttttttcta
     6841 aatttttaaa tattaattat gaaaaattta ctcaaaaaaa tcaatctgaa attttaaagt
     6901 ccattacagg ggaagtttat aatctaagca ctatgatttc atcattttta cttttgatga
     6961 gtgaaatttt tgtagtactt ttgctttatg ctttaatgct tttgattaat tataaaatca
     7021 ctttgttttt aagtattttt atggtgttaa atgcctttat tttagtgaaa attttaagcc
     7081 ctatcattaa aaaagcagga gtaagacgcg aagaagcgat gaaaaatttc tttgaaattt
     7141 taaatacaaa tttaaataat ttcaaattta ttaagcttaa aaccaaagaa gatggagtat
     7201 taagtctttt taaagcgcaa agtgaagctt tttctaaagc aaatattacc aacgaaagcg
     7261 tagctgcggt gcctagaatt tatcttgaag gaataggctt ttgcgtactt gtttttatcg
     7321 tggtattttt ggttttgaaa aatgaaagtg atatttcagg tattttatcc acgatttcta
     7381 tttttgtttt agcgctttat cgcttaatgc caagtgcaaa tcgtattatt acaagttatc
     7441 atgatttgct ttattatcat tcttctttgg atattattta tcaaaattta agacaagaag
     7501 aagaaaattt gggcgaggaa aaattaagct ttaatcaaga gcttaaaatt tgcaatctta
     7561 gctttggtta tgagggaaaa aaatatttat ttaaaaatct taacttaaat attaaaaaag
     7621 gcgaaaaaat cgcttttata ggggagagtg gttgtggaaa aagtacctta gtagatctta
     7681 tcataggact tttaaaacca aaagaagggc aaattttaat tgatgagcaa gaattaaatg
     7741 caaataatac aaaaaattat cgccaaaaaa taggctatat cccgcaaaat atctatcttt
     7801 ttaatgacag tatagctaaa aatatcactt ttggagatgc ggttgatgaa gaaaaactta
     7861 atagggttat caaacaagca aatttagagc attttataaa aaatttacct caaggagtgc
     7921 aaacaaaagt gggcgatggg gggagtaatt taagcggggg acaaaaacaa cgcatagcta
     7981 tagcaagagc tttatattta gagcctgaaa tgttagtgct tgatgaagca acttctgcgc
     8041 ttgatactca aagtgaagca aaaattatgg atgaaattta taaaatttct aaagataaaa
     8101 ccatgattat tatcgcacat cgcctttcta cgataacaca atgtgataag gtttatcgtt
     8161 tagaacacgg taagcttaaa gaggagaaat gatgaaaata agctttatta tcgcaacttt
     8221 aaattcagga ggtgctgagc gtgctttagt aaccttagct aatgcacttt gcaaagagca
     8281 tgaagtaagt attattaaat ttcatgcagg agaatctttt tataagcttg aaaatgaagt
     8341 taaagttaca agtttggaac aatttagatt tgacacgctt tatcataaaa tcgcaagtcg
     8401 ttttaagaaa ttttttgctt taagaaaggc tttgaaagaa agtaagtctg atgtttttat
     8461 ttcttttttg gatacgacta atattgcttg tattgctgcg aaaatagggc ttaaaactcc
     8521 actcattata agtgagcata gcaatgaagc gtatttaaaa cctaaaattt ggcgtttttt
     8581 aagaagggta agctatcctt tttgtgatgc tttaagtgtg cttggaagca gtgataaggt
     8641 gtattatgaa agatttgtaa aaagggttaa gcttttatta aacccttgtc attttagcga
     8701 tgaaatttct tttgattcta gttttgaaaa ggaaaatttg gttcttttta tagggcgttt
     8761 agatcacaac aaaaaccctg taatgttttt aaaagctata gcgcatttgg ataaaaattt
     8821 acaagaaaat tataaatttg ttatagcagg agatggacag ttaagacaag aacttgaata
     8881 taaggtaaaa tctttaggaa taaaagttga ttttttagga cgcgttgaaa atgtcaaggc
     8941 tctttatgaa aaagcaaaag tgctttgcct ttgttctttt gtagagggtt tgccaacggt
     9001 tttaattgaa agtttgtatt ttgaggtttg tagaatttca agttcttatt ataatggtgc
     9061 taaggattta atcaaagata atcatgatgg gcttttggta ggttgtgatg atgaaatagc
     9121 acttgctaaa aaacttgaac ttgttttaaa tgatgaaaat tttagaaaag aacttgtaaa
     9181 taatgccaaa caaaggtgta aagactttga aatttctcat atcaaagaag aatggcttaa
     9241 gcttatagcc gaggttaaaa atgcctaaac tttctgttat agtaccaact tttaatcgtc
     9301 aagttttgtt agaaaaggct attaaaagca tacaaaatca agattttaaa gatttagaaa
     9361 ttattgtaag cgatgataat tctagcgatg atactaaaag tgtggtgcaa aatttacaaa
     9421 aagatgatga tcgcattaag tattttttaa atcaaaatta caaacaaggt ccaaatggca
     9481 ataaaaacaa tggcttagat caagcaagtg gcgagtttgt aactttttta gatgatgatg
     9541 atgagctttt atccggggct ttaagtacct tgatgcaaaa agcaaatgag ggttatgctc
     9601 atgtttttgg aaattgtttg atagaaaaag aaggaaattt aagcaaggaa tttagcggaa
     9661 agggcttgga aaaagatagt gaaatttcta aaaaagattt tttaatggct aaatttagcg
     9721 gagagttttt ttctgttttt aaaaaatccc tacttgaaaa taagcgtttt aatgaagaat
     9781 tttatggcaa tgaagccacg ctttgggtaa atttatacaa agaaaaaagt ttttatatcc
     9841 ataaggcttt taggatttat agaattttta ggcaagatag cgtgacttta ggggcgagta
     9901 aaaatgctta tagggtgtat ttgggatatt tagagcttgc taaaatttta gaaaatgaac
     9961 ttagaatgag taaggataaa gattataaaa aaacttgtgc gagttattat aaaatggcag
    10021 cttattatgc aaaacttgca aaaaattata aagcccttta taaatgtttg tttaaaagcc
    10081 taagtataaa aatcaacgct cctgctttga tattactcat tttaagtata attccaaata
    10141 atatgattga aaaattatca aaaattcggg tggctttatg caaaaattag gcatttttat
    10201 ttattcttta ggaagtggtg gtgctgaaag agttgtggcg actttattgc ctattttaag
    10261 tttgaaattt gaagtgcatt tgatcttgat gaatgataaa atttcttatg aaattccaga
    10321 gtgtcaaatt cattttttag aatgttcaaa acctagtgaa aatcctattt tgaaattttt
    10381 aaaactacct tttttggctt taaaatacaa aaaactttgc agaaatttag gtattgatac
    10441 agaatttgtt tttttaaatc gacctaatta tatagcttta atggcaagaa tgtttggaaa
    10501 caaaactcgc cttgtgatca atgaatgcac tacgccaagt gtgatgtata tgaaaaataa
    10561 ttttaattct ttggtaaata aatttttaat ttctttgctt tacccaaaag ctgatttaat
    10621 cttgcctaat tctaagggaa atttagaaga tttagtgcaa aattttagta taagtccaaa
    10681 aaaatgtgaa attttataca atgccatcga tttagaaaac atagggcaaa aagcccttga
    10741 agacatagct ttaaaagata aatttatttt aagtgtaggc aggcttgata aaggtaaaaa
    10801 tcatgcttta ttaattcgtg cttatgcgag attgaaaaca gatttaaagc ttgtgatttt
    10861 aggtgaaggt gtgcttaagg atgagctttt agctttgatt aaagaattaa atttggaaga
    10921 aaaggttttg cttttaggat ttgataataa tccttataaa tacatggcta aatgcgaatt
    10981 ttttgctttt gcttctgtgt ttgaaggttt ttcaaatgtt ttaatcgaaa gtttggcttg
    11041 ttcttgtgcg gtggtttgca ctgatcataa aagtggtgca agagagcttt ttggcgatga
    11101 tgaatttgga cttttagtag aagtagataa tgaaaactct atgtttcagg gtttaaaaac
    11161 tatgcttgaa gacgataaat taagaaaagc gtataaaaac aaagctaaaa ctagggctaa
    11221 agcctttgat aaagtaaaaa ttgcacgcga tgctttgaaa tatttattag gataaaagat
    11281 gttgaaaaaa gagtatttaa aaaaccctta tttagttttg tttgcgatga ttatattagc
    11341 ttatgttttt agtgtattgt gtagatttta ctggatttgg tgggcaagtg agtttaatga
    11401 gtattttttc aataatcaat taatgatcat ttcaaacgat ggctatgctt ttgctgaggg
    11461 cgcaagagat atgatagcag gttttcatca gcctaatgat ttgagttatt atagatcttc
    11521 tttatctacg cttacttatt ggctttataa aatcacacct ttttcttttg aaagtatcat
    11581 tttatatatg agtacttttt tatcttcttt ggtggtgatt cctattgttt tactagctaa
    11641 cgaatacaaa cgtcctttaa tgggctttgt agctgctctt ttagcaagtg tagcaaacag
    11701 ttattataat cgcactatga gtgggtatta tgatacggat atgctggtaa ttgttttacc
    11761 tatgtttatt ttatttttta tggtaagaat gattttaaaa aaagactttt tttcattgat
    11821 tgccttgcca ttatttatag ggatttatct ttggtggtat ccttcaagtt atactttaaa
    11881 tgtagcttta attggacttt ttttaattta tacacttatt tttcatagac aagaaaagat
    11941 tttttatata gctgtgattt tgtcttctct tactctttca aatatagcat ggttttatca
    12001 aagtgccatt atagtaatac tttttgcttt atttgcttta gagcaaaaac gcttaaattt
    12061 tatgattata ggaattttag gtagtgcaac tttgatattt ttgattttaa gcggtggggt
    12121 tgatcccata ctttatcagc ttaaatttta tatttttaga agtgatgaaa gtgcgaattt
    12181 aacacagggc tttatgtatt ttaatgttaa tcaaaccata caagaagttg aaaatgtaga
    12241 ttttagcgaa tttatgcgaa gaattagtgg tagtgaaatt gttttcttgt tttctttgtt
    12301 tggttttgta tggcttttga gaaaacataa aagtatgatt atggctttac ctatattggt
    12361 gcttgggttt ttagccttaa aaggggggct tagatttacc atttattctg tacctgtaat
    12421 ggctttagga tttggttttt tattgagcga gtttaaggct atattggtta aaaaatatag
    12481 ccaattaact tcaaatgttt gtattgtttt tgcaactatt ttgactttag ctccagtatt
    12541 tatccatatt tacaactata aagcgccaac agttttttct caaaatgaag catcattatt
    12601 aaatcaatta aaaaatatag ccaatagaga agattatgtg gtaacttggt gggattatgg
    12661 ttatcctgtg cgttattata gcgatgtgaa aactttagta gatggtggaa agcatttagg
    12721 taaggataat tttttccctt cttttgcttt aagcaaagat gaacaagctg cggctaatat
    12781 ggcaagactt agtgtagaat atacagaaaa aagcttttat gctccgcaaa atgatatttt
    12841 aaaaacagac attttacaag ccatgatgaa agattataat caaagcaatg tggatttgtt
    12901 tctagcttca ttatcaaaac ctgattttaa aatcgataca ccaaaaactc gtgatattta
    12961 tctttatata cccgctagaa tgtctttgat tttttctacg gtggctagtt tttcttttat
    13021 taatttagat acaggagttt tggataaacc ttttaccttt agcacagctt atccacttga
    13081 tgttaaaaat ggagaaattt atcttagcaa cggagtggtt ttaagcgatg attttagaag
    13141 ttttaaaata ggtgataatg tggtttctgt aaatagtatc gtagagatta attctattaa
    13201 acaaggtgaa tacaaaatca ctccaattga tgataaggct cagttttata ttttttattt
    13261 aaaggatagt gctattcctt acgcacaatt tattttaatg gataaaacca tgtttaatag
    13321 tgcttatgtg caaatgtttt ttttaggaaa ttatgataag aatttatttg acttggtgat
    13381 taattctaga gatgctaagg tttttaaact taaaatttaa gggttgaaaa tgagaatagg
    13441 atttttatca catgcaggag caagtattta tcattttaga acgcctatta taaaagcatt
    13501 aaaagataga aaagatgaag tttttgttat agtgccacaa gatgaataca cacaaaaact
    13561 tagagatctt ggcttaaaag taattgttta tgagttttca agagctagtt taaatccttt
    13621 tgtggtttta aagaattttt tttatcttgc taaggttttg aaaaatttaa atcttgatct
    13681 tattcaaagt gcggcacaca aaagcaatac ctttggaatt ttagcagcaa aatgggcaaa
    13741 aattccttat cgttttgctt tggtagaagg cttgggatct ttttatatag atcaaggttt
    13801 taaggcaaat ttagtgcgtt ttgttattaa taatctttat aaattaagtt ttaaatttgt
    13861 acaccaattt atttttgtca atgaaagtaa tgctgagttt atgcggaatt taggacttaa
    13921 agaaaataaa atttgcgtga taaaatctgt agggatcaat ttaaaaaaat tttttcctat
    13981 ttatgtagaa tcggaaaaaa aagagctttt ttggaaaaat ttaaacatag ataaaaaacc
    14041 cattgtgctt atgatagcaa gagctttatg gcataagggt gtaaaagaat tttatgaaag
    14101 tgctactatg ctaaaagaca aagcaaattt tgttttagtt ggtggaagag atgaaaatcc
    14161 ttcttgtgca agtttggagt ttttaaactc tggcgcggtg cattatttgg gtgctagaag
    14221 tgatatagtc gagcttttgc aaaattgtga tatttttgtt ttgccaagct ataaagaagg
    14281 ctttcctgta agtgttttgg aggcaaaagc ttgcggtaag gctatagtgg tgagtgattg
    14341 tgaaggttgt gtggaggcta tttctaatgc ttatgatgga ctttgggcaa aaacaaaaaa
    14401 tgctaaagat ttaagcgaaa aaatttcact tttattagaa gatgaaaaat taagattaaa
    14461 tttagctaaa aatgccgccc aagatgcttt acaatacgat gaaaatataa tcgcacagcg
    14521 ttatttaaaa ctttatgata gggtaattaa gaatgtatga aaaagttttt aaaagaattt
    14581 ttgattttat tttagcttta gtgcttttag tgcttttttc tccggtgatt ttaatcactg
    14641 ctttactttt aaaaatcact caaggaagtg tgatttttac ccaaaatcgt cccgggttag
    14701 atgaaaaaat ttttaaaatt tataaattta aaaccatgag cgatgaaaga gatgaaaagg
    14761 gtgagttatt aagcgatgaa ttgcgtttga aagcttttgg aaaaatcgtt agaagcttaa
    14821 gtttggatga gcttttgcaa ctttttaatg ttttaaaagg ggatatgagt tttgttggac
    14881 ctagacctct tttggttgag tatttgcctc tttacaataa agagcaaaaa ttgcgtcata
    14941 aagtgcgtcc aggtataaca ggatgggcgc aggtaaatgg tagaaatgct atttcttggc
    15001 agaaaaaatt cgaacttgat gtgtattatg tgaaaaatat ttcttttttg cttgatttaa
    15061 aaatcatgtt tttaacagct ttaaaggttt taaaacgaag tggggtaagc aaagaaggcc
    15121 atgttacaac agagaaattt aatggcaaga actgaaaaaa tttatattta tggtgctagt
    15181 ggtcatgggc ttgtttgtga agatgtggct aaaaatatgg gttataaaga atgtattttt
    15241 ttagatgatt ttaaaggaat gaaatttgaa agtaccttac ctaaatatga tttttttata
    15301 gccataggaa acaatgaaat tcgaaaaaag atttatcaaa aaatttcaga aaatggcttt
    15361 aaaattgtca atcttatcca taaaagcgcg cttataagtc ctagcgcaat cgtggaagaa
    15421 aatgcaggaa ttttaatcat gccttatgta gtgattaacg ctaaagctaa aatagaaaaa
    15481 ggtgtgattt taaatacttc aagcgtaatt gagcatgaat gtgtgatagg ggaattttct
    15541 catgtgagtg tgggagctaa atgtgcgggt aatgtaaaaa ttggtaaaaa ttgtttttta
    15601 gggattaatt cttgtgtttt gcctaattta agtttggcag atgatagtat tttaggtggt
    15661 ggagcaactt tagttaaaaa tcaagatgaa aaaggtgttt ttgtgggagt acctgcaaaa
    15721 aggatgtaaa ttgcatttta ataacaatct tgttgttcac tatatagtaa atccttcgcc
    15781 tttggggtgg attgtcatta atttactaac catatgtcta atatgctaca tatttccttt
    15841 gaaaaattct ttaaaacaca aaaaactttt tagtcttaaa gcaaatgtaa attctaaaaa
    15901 tagtaggatt ataaaatata caggtattgc tgcttttttg ggtggattaa taggaatttg
    15961 gtataatttt gaaggttttt atcaacttct ttttttcttt gaattagaaa atgaaaattt
    16021 aaaaacactt tggagtttgc aagtatcagt ttcttctgtg ataacaggta tgttattatt
    16081 gttgatatat gttataaatt tagcaatggt ttgtgaaaat ggaatttata tagttagtaa
    16141 atttaatctt ttttatatgt attttataaa acgagaagat ttggaaattg ttaaaataga
    16201 aaaaatgaaa tttttaaatc aagttgaagt ttgttttgtt atcaaaacaa aaaataaaat
    16261 actccttaaa tgctttgaaa gtatttataa aaaagaagac ttagaaaagc ttaaaaattg
    16321 gtatgaaaac aagctttgac tataaaaaga atttaaatat ttgaatcttt gtaaattttt
    16381 ttaggtaaaa tagagtcaat ttataaaaat tttgttttac acaaaggata aatcatgaga
    16441 ttttttcttt ctcctccgca tatgggtggt aatgaattaa aatacataga agaagttttc
    16501 aaaagcaatt atatagcacc tttgggtgaa tttgtaaatc gctttgaaca aagtgtcaag
    16561 gcttacagta aaagtgaaaa tgccttagct ttaaattcag ccacagcggc tttgcattta
    16621 gctttaaggg tggcaggggt aaaacaagat gatattgttt tggcttcttc ttttactttt
    16681 atcgcttcag tagcacctat ttgttatctt aaagcaaaac ctgtatttat agattgtgat
    16741 gaaacttata atatcgatgt agatttatta aagcttgcta ttaaagaatg tgaaaaaaaa
    16801 ccaaaagcat tgattttaac tcatctttat ggcaatgcgg ctaaaatgga tgaaattgtt
    16861 gaaatttgca aagaaaatga aattgtttta atcgaagatg ctgctgaagc tttaggaagt
    16921 ttttataaga ataaagcttt aggaactttt ggagaatttg gagcttattc ttataatggc
    16981 aataaaatta tcaccacttc aggtggaggt atgcttatag gaaaaaataa agaaaagatt
    17041 gaaaaggcaa gattttatag cactcaagct agggaaaatt gtttgcatta tgaacattta
    17101 gattatggtt ataattaccg cttaagcaat gttttaggag ctattggcgt agcgcaaatg
    17161 gaggttttag aacaaagagt gcttaaaaaa agagaaattt atgagtggta taaagaattt
    17221 ttaggagagt gttttagctt tttagatgaa ttagaaaatt caagaagcaa tcgctggtta
    17281 agtacagctt tgattgattt tgataaaaat gaacttaatt cttgtcaaaa agatataaat
    17341 atcagtcaaa aaaatattac tttgcatcca aaaatttcaa aactcataga agatttgaaa
    17401 aatgaacaaa tagaaacaag accattatgg aaagctatgc acgctcaaga agtatttaaa
    17461 ggagctaagg cttatcttaa tggcaatagt gagttatttt tccaaaaagg aatttgtttg
    17521 ccaagtggca cggcgatgag taaagatgat gtttatgaaa tttcaaaact gatcttaaag
    17581 agcataaagg cttaaaatga ttttttataa aagcaaaaga ttagcatttt ttttaacttc
    17641 agatattgtt ttaattttac ttagcgttta tctggctttt tctttgagat ttagtggaga
    17701 tattccgagt attttttatc atggtatgat ggtttctgct attattttgc ttgttttaaa
    17761 actttcattt ttgtttgttt ttagaattta taaagtagct tggagatttt tttctctcaa
    17821 tgaagcaaga aagattttta tcgctttgct tttagctgag ttttgttttt ttcttatttt
    17881 ttattttttt agtgattttt ttaatccttt tccaagaagt gctattgtga tagattttgt
    17941 tctttcttat atgtttatag gtactttaag aattagcaaa agaatgcttg tggattttaa
    18001 accttctaga atgaaagaag aagaaactcc ttgtattgta gtaggggcaa cttctaaggc
    18061 tttgcatttg ttaaaaggtg caaaagaagg ttctttaggg ctttttcctg taggcgtagt
    18121 tgatgcgaga aaagagctta tagggactta ttgtgataaa tttattgtag aagaaaaaga
    18181 aaaaataaaa tcttatgtag aacaaggggt aaaaactgcc attattgctt taagacttga
    18241 acaagaagag cttaaaaaac tttttgaaga acttgtagct tatggtattt gcgatgtaaa
    18301 aatattttct tttacaagaa acgaagcaag agatatcagt atagaagact tgcttgctag
    18361 aaaaccaaaa gatttagatg atagtgctgt ggcggctttt ttaaaagata aggtagtttt
    18421 ggtaagtgga gcaggtggaa ctataggcag tgaactttgt aagcaatgta ttaaatttgg
    18481 tgctaagcat cttatcatgg ttgatcatag tgagtataat ctttataaga tcaatgatga
    18541 tttaaattta tataaagaaa aaattactcc tattttactg agtattttag ataagcaaag
    18601 tttagatgag gtattaaaaa cttataaacc cgagcttatt ttacatgcag ccgcttataa
    18661 acatgtgcct ctttgcgaac aaaatccaca ttcagcagta atcaataata ttttaggaac
    18721 taaaatttta tgcgacagtg ctaaagaaaa caaagtagct aaatttgtga tgataagtac
    18781 agataaagca gtacgaccaa caaatattat gggttgcact aagagagttt gcgagcttta
    18841 tactttaagt atgagtgatg aaaattttga agttgcttgt gtgcgttttg gtaatgtttt
    18901 aggttctagt ggtagtgtga taccgaaatt taaagcacaa attgccaata atgagccttt
    18961 aactttaacg caccctgata tagtgcgtta ttttatgctt gtggctgagg cagtgcaact
    19021 tgttttacaa gctggagcta tcgcaaaagg gggagaactt tttgttttgg atatgggtaa
    19081 gcctgtgaaa atcatagatt tagctaaaaa aatgctttta ctttctaatc gcaatgattt
    19141 agaaattaaa atcacaggct taagaaaagg tgagaagctt tatgaagagc ttttgattga
    19201 tgaaaatgat gctaaaacac aatatgagag tatttttgta gcaaagaatg agaaggttga
    19261 tcttgattgg cttaataaag agatagaaaa tttacaaata tgtgaagata tttcagaggc
    19321 tttattaaag attgtacctg aatttaaaca caataaagaa ggtgtataat gtatataaaa
    19381 gatatacaaa gatttgaaga taatcgctat cgtgctagag cttatatgag ttatatttta
    19441 acaagaaatc tgcccaataa acttcctgat attcaccttg aaacgattaa aacagctttg
    19501 gataaaatag ctcatgaagt tgttgttttt gatgctttgt atattttaga tatttcaggc
    19561 atgcaaatag aaaatgcgat ttccttaaat aaagctcatg aaatagggca gggtgaggat
    19621 agaagtactc gttcttattt ttatagagct gtaaaattaa gacgatgtgt tttgagcgat
    19681 ccttatcctt cggttttaaa taatgagctt tgcgtgacag cttctatgcc aatttacgat
    19741 gataaaaata acttgctttt tgttgtttgt attgatatca agcttgaaga tattttaaag
    19801 attattcaag caggaaaatt tgaatttgtt tttactcagt ttagtcgttt ggtatatttt
    19861 tgcttcgcac tggttttatt tgtgattact tgttttttat ttcaaaaagg tttttttagt
    19921 ctttttgata atcaagctat aggtatagaa catatgtttg aaagtaccat cgctataact
    19981 ttggctttag ctatttttga tttggcaaaa actttgatcg aacaagaagt attaggaagg
    20041 acgaaaaaag aagaaggtgg aattcaaaaa actatggtga gatttttggg ttctattatc
    20101 attgctttag ctatagaagc tttgatgttg gtatttaaac ttgctattgg tgatctttct
    20161 cagatgattt atgcgattta tcttatcggt ggagtgagct tgcttctttt aggtttaagt
    20221 gtatatttat ttacggttaa gtataaaaat aataatattt gagtaaaaat ttaagtaaaa
    20281 gatgatataa tgctgttttt taaaattttt tagcttgatt aataaggcta aaaagggtaa
    20341 aataaaacta taaaaacttt gaaaggacga aattgtgaaa ttgttagttg ttgatgacag
    20401 ttctactatg agaaggatta ttaaaaatac cctaacaaga cttggacacg atgatgtttt
    20461 agaagctgag catggcgttg aagcttggga tttattaact aaaaatgaag atgtaaaagt
    20521 tttaattaca gattggaata tgccagaaat gaatggcttg gagttggtaa aaaaagtaag
    20581 agcagagaaa aaatatgaag atatgcctat catcatggtt acaactgagg gcggaaaagc
    20641 tgaagtgatt actgctttaa aagctggcgt aaataactat attgtaaaac cttttactcc
    20701 acaagtttta aaggaaaaac ttgaagatgt tttaggaaca ggaagtggag aaggtgcagc
    20761 tgagtaaagg ctgattttta aaattctaaa tgcaaaaaaa atattatgaa ttgttcttta
    20821 tcgtagaaga gcagtataaa aatttatttc ttgattttgc ttttgattta ggtatagaag
    20881 ccatagaaga gaaagataat ggtgtttaca ttagatccca tgagagttta gaagagtttt
    20941 catgggcact tgaaatattt gctcaaaaac ttacaactac tttcaattta aaccataaaa
    21001 ttatttctaa tttaagtctt gtagagaaag aaaacaagga ctggatacaa gaatataaaa
    21061 aaggcataaa acctatctta gtggataatg tttacatcca tacaacttgg caagaagaaa
    21121 agaagaattg tataaatata aagattaatc cagccttagc ctttggctca ggacatcacg
    21181 aaagcacata ttcttgtgta aaatttttac aaaaattttc taaaagtaaa ttaagagctt
    21241 tagatcttgg ttgtggtagt ggaattttgg gtattattat ggcaaagttt ggttgtaatg
    21301 ttgaaatttg tgatactgat gagttggcta ttgatagttc tttagaaaat gcaagattaa
    21361 atggtgtcga ttttcacaag gcttggtgtg gatctataga taaagcaaat ggtttatata
    21421 atctaattgt tgcaaatatc attgcagatg tgattttaat tttagaaaaa gatattaaaa
    21481 accatttaga agataatgct atacttattt tgtcaggaat tttagataaa tattcaacaa
    21541 gaattaaaga aaaatttcaa gatttggaac tcattgatga aatgcaaatc aatgagtggt
    21601 gtagttttgt atataaaaat aataaaaaag gataagtaat gaataataat acccaaaata
    21661 ataagggtaa tccgcagggt aataattttt ttaacaaaaa tcccattttt atttttgcga
    21721 tttttgcaat tataatgata attattttta agggattttt tgatggcaat ggttcttttg
    21781 gcggggcatt gaatggcaat gaagtaaata aaaatgtccc ttattctgag ttaaaaaagc
    21841 ttattgaaag tggacaaatc aatcaagtta gtataggaca aacaacaatc aaagcgattt
    21901 caagctctca caatactgtt tatacagcaa aaaaagttaa tgatcctgag cttgtgagtt
    21961 tactagatag taaaaatatc gcttatggtg cgtattctga aacaaattgg tttacggata
    22021 tacttttttc atgggttttg ccagtattta ttttctttgg tatttggatg tttttggcaa
    22081 gtcgtatgca aaaaaatatg ggaagttcta tattgggtat aggaagttct aagaagcttg
    22141 taaattcaga aaaacctaaa gtaaaattta gcgatgtagc tggtgttgaa gaagctaaag
    22201 aagaagtaaa agaaattgta gattttttaa agtatcctga aagatatatt aaattgggag
    22261 ctaaaattcc aaaagggctt ttacttgttg ggcctccagg tacaggaaaa actttgcttg
    22321 caaaagcagt tgcaggtgaa gctgatgtgc cgttttttag tgtttcaggt tcgtctttta
    22381 tagaaatgtt tgtgggtgta ggtgcttctc gtgtgagaga tttatttgaa aatgcaaaaa
    22441 aagaagctcc tgctattgtt tttatagatg aaatagatgc tattggtaaa agtcgtgcag
    22501 caagtggcat gatgggtgga aacgatgaaa gagagcaaac tttaaatcag cttttggctg
    22561 aaatggatgg ctttgggaca gaaagttccc cagtcattgt tttagcagca acaaatcgcc
    22621 cagaagtttt agatgcagcg cttttaagac caggaaggtt tgatagacaa gttttagttg
    22681 ataaacctga ttttaaaggt aggtgtgata ttttaaaagt gcacatgaaa gatgtcaaaa
    22741 tctccccaaa agttaaagta gaagatatag cacgcttaac cgcagggctt gcaggagctg
    22801 atcttgcaaa tattattaat gaagcagcgc ttttagcggg tagggattct aaaaaatatg
    22861 tagaacaaaa tgatttagtt gaagctgttg aaagagctat agcagggctt gagaagaaat
    22921 cacgtcgtat taatgaaaaa gaaaagaaaa ttgttactta tcatgaatgc ggtcatgctt
    22981 tgattgctga aactaccaaa ggcgcaaaac gtgtaagtaa ggtttctgtg attccgcgtg
    23041 gtcttgcggc tttaggttat actttaaata ctcctgagga aaataaattt ttaatgcaaa
    23101 aacatgaact tatcgctgaa gtagatgtac ttttgggtgg tcgtgcagct gaagaagtgt
    23161 ttataggtga aatttcaacg ggtgcaagta atgatttaga aagagcaacc gatatcataa
    23221 aagctatgat ttctatgtat ggtatgagtg aaattgcagg acttatggta cttgaaaaac
    23281 aaagaaatac tttcttaagt ggtggacaaa ctatcaaaga ttattctgaa aagatggcag
    23341 aatctttaga tgattatgta aagaaaacct tggatgaacg ctataaagat gttaaagata
    23401 ctttaaatac ttataaggga gcgattgaga ctatggttgc agccctttat gaagaagaaa
    23461 ctattgaagg taataaagtg cgcgagatta ttaaagagtt tgaggatcaa aatagtctac
    23521 caactcgttt acaagaactc gaagaagtta aaactgaagt taaagtagaa gaatgaaaga
    23581 ttttattgca aaatatggat atttaagtct tattatttta agcttaattt ttatttttgt
    23641 atggattttt tattcttttt ccatcttgct attagcatta attgtaattt gtatttttct
    23701 ttttagagcg cccaaaagag aacttgtttg tagtgatgaa aaagctattt ttgcacctat
    23761 ggatggtagg gttactaaaa tagaaaatat tcatcataaa gatttgggtg aatgtgttga
    23821 aattgctatt aaaaatgctc tttatgatgc tgggaatttt aatacacctt ttgcaatgtc
    23881 tataatagat attcgtttac gacatgggct ttttttgtgc agtgaattaa aatctgcaaa
    23941 aatgatgaat gaaagagctt ttattttggc aaaagttaaa gagaataaaa cgatagcctt
    24001 gcgaatctat gcaggttctt ttgatagaaa attaaagctt gataatattt ctcatgattt
    24061 aaaagcagga gatagaatgg gttttttaat taatggctct ataagtttac ttttaccaaa
    24121 agatactaga attcatatag gcttaaatga tgaaattaaa gcaggttcat tgctaggcta
    24181 ttttgcgtaa ggaaaaataa tgaataacag accgcaacta atttatattt tacccaatct
    24241 ttttacagct gcttcagctt ttttaggggt tatttctatt atagcttcaa tacatggaaa
    24301 ttattataca gctttgattt atattatttt atctttgatt tgcgatgggc ttgatggccg
    24361 tgttgcaaga cttacaaatt ctacttcaaa atttggagta gaatttgatt ctttggctga
    24421 tctagtagct tttggagttg ctccagcggt tcttttttat atggctatag gttatgattt
    24481 tggaaaactt ggatctttga ttacagcttt ttttgtggtt tttggagcta ttcgtttggc
    24541 gagatttaat gttaccacag gcacttatga accctccgtt tttataggtc ttcctatacc
    24601 tactgcagca gttgtgagta ctatatggac ttatgcgttt atcagttatg attttttaaa
    24661 gccttatggc gtagtttttt tggtgcttca agcaatttta gggcttttaa tggtaagtaa
    24721 tatacgttat cctagtttta aaaagcttga ttttaatcgt tctagtgttt taaaagtttt
    24781 gattatttta attataatat tttcattttt atatctttac cctcttgaaa gtttagtaat
    24841 tttagcaagc ttgtatgtgc tttatggaat tattcgggtt ttatatacca ttatcgtttc
    24901 aaaatttaag ataagaaatc aagagtaaaa tttttcaatg acttcgcatt cttcttgagt
    24961 gaagccagct ttgattcttg cttgaatgtt aagttttttt cccgcaagag agaattgttt
    25021 aaacgttttg caaagctcaa taaaatcata cctgttttga tttgcaaatt tccaccaagt
    25081 atctcctttt ttaacgtgtt ttatttcatc attaagtata atttcaagat attccattag
    25141 aagattttta atggaatgat tggaactttg aagtttttga acaacaaagg ggttggcatc
    25201 aagcccttta gcttctaaac ctctatgaac tactcccatt ctaaagctta aagagtcttt
    25261 tgtagcttct agagcagatt ctaaattatc atgcactgga aaatttccat atttgtaacc
    25321 aagttcttta agtactgaat ttaaaagttt gaaatgttta atttcctcat ctgctacctc
    25381 cagccaatcg taataaaatt gcaaaggtag atttttaaag cgataactcg catctaaagc
    25441 caggttaatt gcattaaatt ctatatgagc gactgaatga attattttag caagcgcatg
    25501 agttgaattg acaaatttag gccttcttat acgcgtagga tgaagcaagg taatttgttg
    25561 tgatgtattt tttttgaaaa tgctttgatg ctcgtgatta aaattaaatt tgtggctttt
    25621 aaagtcttca taaaaatttt gaaaagagtg aaattttata gttatatttt tttca
//
LOCUS       DAPIWB010000016        24825 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.017, whole genome shotgun sequence.
ACCESSION   DAPIWB010000016 DAPIWB010000000
VERSION     DAPIWB010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24825)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24825)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24825
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.017"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            57..830
                     /gene="surE"
                     /locus_tag="RJ266_000547"
     CDS             57..830
                     /gene="surE"
                     /locus_tag="RJ266_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002926992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HDV7354324.1"
                     /translation="MKEILITNDDGYESEGLKKLIKMLQKEFKAKITIVAPASEKSAC
                     SHSITLTKPLRFVKVGKRFYKLDDGTPADCVYLALHALYKTRLPDLVISGINKGANVG
                     EDITYSGTCAGAMEAVLQGIPAIALSQFYKKSEKELDFKNALKITKKIVQNIFDKGFP
                     LGKKEFLNINFPAKSNIKGIKICKAGKRVYNFEAHSNINPRGVEYYWLAAANLDFEDE
                     KNSDIALLKKGYATITPIMLDLTAYERMKKVKKWLKAKE"
     gene            827..1483
                     /locus_tag="RJ266_000548"
     CDS             827..1483
                     /locus_tag="RJ266_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002926987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
                     synthase TcdA"
                     /protein_id="HDV7354325.1"
                     /translation="MNDRFTRIKWLVGEEKFQKISQTKVLVCGLGGVGGICVDALYRS
                     GFKNLTLIDADKFEITNQNRQIHSENIGEEKAKVFERIYKAKGIVSKIDEDFLEKFDL
                     SEFDLIIDAIDDIPAKVALAHLIDFKKQIFISSTGGARKLDPTRIKTTSIFKTHGDAL
                     AKKFRYELRKSGFKGNFDVVFSDEEAHCKDLGSFMGVTASFGLALASLALRKVLAKKS
                     "
     gene            1467..1913
                     /locus_tag="RJ266_000549"
     CDS             1467..1913
                     /locus_tag="RJ266_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV7354326.1"
                     /translation="MLRKADIKDLNACLSLFEQSVKTLCAKDYTKDQICAWIKIDRQQ
                     WEEKFKYDEIFVYEKRGKISVKQEQKLLDLLFTHPDFVRQGLAQNLLDFILKTYLHNE
                     IYTFASLSAKDFFLKNGFELIRENKVIKEGQNLKKFLMKKDVVYKN"
     gene            complement(2024..2404)
                     /locus_tag="RJ266_000550"
     CDS             complement(2024..2404)
                     /locus_tag="RJ266_000550"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HDV7354327.1"
                     /translation="MNITLLKSKIHRASVTEARLDYVGSISIDEKLLQASGILEYEKV
                     QVVNVNNGARFETYTIATQEEGVVCLNGAAARLAEVGDKVIIMSYADFNEEEAKTFKP
                     KVVFVDENNTATKITNYEKHGAIF"
     gene            complement(2401..3249)
                     /locus_tag="RJ266_000551"
     CDS             complement(2401..3249)
                     /locus_tag="RJ266_000551"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HDV7354328.1"
                     /translation="MQVITSVKEAKQIVKDWKSHQLSIGYVPTMGFLHDGHLSLVKHA
                     KTQDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDNGVDMVFIPDATQMYLKNF
                     STYVDMNTITDKLCGAKRPGHFRGVCTVLTKFFNILNPDIVYMGQKDAQQCVVVRHMV
                     DDLNFDLKIQICPIIREEDGLAKSSRNVYLSKEERKASLTISQSIFLAEKLVREGEKN
                     TSKIIQAMKDILEKEKLIKIDYIELVDFNTMENIENITDNVLGAVAAFVGKTRLIDNF
                     LVQGLK"
     gene            complement(3260..4084)
                     /gene="panB"
                     /locus_tag="RJ266_000552"
     CDS             complement(3260..4084)
                     /gene="panB"
                     /locus_tag="RJ266_000552"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HDV7354329.1"
                     /translation="MRKSMISFLEKKAKNEKITMVSAYDYHSARILDNSDIDIILVGD
                     SLAMTVLGMQDTLSVTMDEMLIFTKAVSRGAKKSFVLADMPFMSYQSSDRDAILNASR
                     FIKESHANGVKVEGGIEIASKIKLISQSGIPVVAHLGLTPQAVNMLGGYRVQGKDLQS
                     AQKIIDDAKAVQDAGACMLVLECVPVKLAQKISSILEIPTIGIGSGKYCDGQVLVYHD
                     LLGLNKDFKAKFVKHFDKIDPQVGVEKYRDEVKSGIFPSQEHSFDYLDDELLDKLY"
     gene            4305..5078
                     /locus_tag="RJ266_000553"
     CDS             4305..5078
                     /locus_tag="RJ266_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OXA-61 family class D beta-lactamase OXA-193"
                     /protein_id="HDV7354330.1"
                     /translation="MKKITLFLLFLNLVFGQDKILNNWFKEYNTSGTFVFYDGKTWAS
                     NDFSRAMETFSPASTFKIFNALIALDSGVIKTKKEIFYHYRGEKVFLSSWAQDMNLSS
                     AIKYSNVLAFKEVARRIGIKTMQEYLNKLHYGNAKISKIDTFWLDNSLKISAKEQAIL
                     LFRLSQNSLPFSQEAMNSVKEMIYLKNMENLELFGKTGFNDEQKIAWIVGFVYLKDEN
                     KYKAFALNLDIDKFEDLYKREKILEKYLDELVKKVKNDG"
     gene            complement(5163..6047)
                     /locus_tag="RJ266_000554"
     CDS             complement(5163..6047)
                     /locus_tag="RJ266_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HDV7354331.1"
                     /translation="MIKIDIKLPINTAKGKKQLELNTCLKANEITAIFGESGAGKTTL
                     LKIIAGLIKPEFGRIEVGDELWFDTQKNVNLAIQKRKIGFVFQDYALFPNMSVKENIF
                     YAATSKQKAEELLSLMNLENLAKIYPKNLSGGQAQRVALARALAREPQILLLDEPLSA
                     LDFKMRSFLQDELVKILQHFKITTLLVSHDLAEIYKLSHRILELSDGKIIKDARINEF
                     FTSSNLSAKLRLSATLLEMKKSDILVIFTLLLNQDIVKITLSEEEFLKSYKDVKIGDT
                     LLLSIKAFNPIIVGKLDK"
     gene            complement(6057..6725)
                     /gene="modB"
                     /locus_tag="RJ266_000555"
     CDS             complement(6057..6725)
                     /gene="modB"
                     /locus_tag="RJ266_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HDV7354332.1"
                     /translation="MDNDFLQTLYLTFKLAFITTFMLFFIGVFLAYLLSFVKFPFKSL
                     VQTFVALPLVLPPSVLGFYLLISFSQNSFLGQFLKEYFNLSLVFSFEGLVFASLIFSL
                     PFMVNPLQSAFSSINQNLLDASYTLGKGKIYTLFRVILPNSKVGIFSACAMSFAHTIG
                     EFGVVMMIGGHKKGETLVASIAIYDELEVLNYTLAHQYAFTLFAISFTILLSLYFVNK
                     KIAL"
     gene            complement(6718..7119)
                     /locus_tag="RJ266_000556"
     CDS             complement(6718..7119)
                     /locus_tag="RJ266_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HDV7354333.1"
                     /translation="MNILNGKIIELLNEGEIVIVKISIKEQIFKVLMLDLHSLQDLKI
                     GTKIQVLFKEHELGFTLPHSILSVENSFLARIKSIKKGKILYHIFFDFEGDEISSIIT
                     KEKALELKLEEGQEWLCFVKENDIILKAVYG"
     gene            complement(7116..7865)
                     /gene="modA"
                     /locus_tag="RJ266_000557"
     CDS             complement(7116..7865)
                     /gene="modA"
                     /locus_tag="RJ266_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV7354334.1"
                     /translation="MKKLVLCFIVLFLSLNLNAQNLSVFVASSASKAMEEVKNEFLKS
                     HPNDNIDLVFGASGKYYQLLKQGREFDLFFSADTKYAQAIYEDQNALDKPKVYVLGIL
                     ALYSLDESLLEGGIEKLKDKANKIHHLSLANPKVAPYGVAAKEVLENLNLDKLFEDKI
                     VLGENISVPVLHVDSNNADLGIVAYSLVSSINHPKGKAILIDQKYFTPLKQSYVITKY
                     AKDKKLAFEFSDFISSQKAKEIFKKYGFDTP"
     gene            complement(7919..8605)
                     /gene="bioC"
                     /locus_tag="RJ266_000558"
     CDS             complement(7919..8605)
                     /gene="bioC"
                     /locus_tag="RJ266_000558"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HDV7354335.1"
                     /translation="MNFLKAKDYQKHAKVQDLMGLKLCEILKNLEISHFKKVFEFGCG
                     RGEFSDKLSKIITFDEYLKNDILDYPDNLNVEIFDMNTLATQNLSKQKFDLITSNASL
                     QWLDLKQVLPTLANMLNKKGILLLSTFGEMNLKEIKQSTSLGLKYFSTKELEQIFKPY
                     FSDIKITEEIVNLEFQNALEVFKHLKLSGVNSLGFYRLNKQFLKEFEEKFQNKLTYHP
                     IFILCKKDTK"
     gene            complement(8602..9213)
                     /locus_tag="RJ266_000559"
     CDS             complement(8602..9213)
                     /locus_tag="RJ266_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HDV7354336.1"
                     /translation="MKYEFLCKNPDSKKLIVVFGGFASHSSHFSHLKSDKNVILFYDY
                     ENFDLNFDFKAFDELFLIAFSMGVCVANRLLKELNFKQKIAINGTNLGIDKSKGIHPA
                     IFRKTLQNFKLENFKEALFKERKNLTKDFIFKDEKALKIELEKLFDFALVKQEENLLW
                     DKVYSSKKDEIFPPNALKNSFKNLIFLDEPHFAFFHFKTWDEI"
     gene            complement(9210..10352)
                     /locus_tag="RJ266_000560"
     CDS             complement(9210..10352)
                     /locus_tag="RJ266_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase
                     family protein"
                     /protein_id="HDV7354337.1"
                     /translation="MKLEKILQDLEQNHNLRTLTPLKHENKFVYKQDHKLLNLVGNDY
                     LYLASSKELKAEFLNTLKEQDLFFSSSSSRSLSGNFEIYEKLESFLKTKFKDKEILHF
                     NSGYHLNISCIAALSSVSKTLFLTDKFIHASMIDGLRLGRADFFRFHHKDMNHLESLI
                     QKHYENYENIIVLSEALFSMDGDFSDFKTLCELKRRYDKIKLYIDEAHSVGCFDEEGL
                     GLVKKLALENEVDFLVFTFGKALASMGACIICDEKYKKFFINKARAFIYSTALPPINV
                     AWTQFIFKKMPYFKKEREKLELLSTFFKSKLQEKNHIVLGDAYIICLLLGENKKALEI
                     SQKLQKAGFFAPAIKEPTVPKNTARIRFSLHAGLNTEELERIIELL"
     gene            10420..11703
                     /locus_tag="RJ266_000561"
     CDS             10420..11703
                     /locus_tag="RJ266_000561"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HDV7354338.1"
                     /translation="MQNQILKNLDLKHIWHPCTQMKDHETLPLIPIKKAKGVWLYDFD
                     DKAYMDCVSSWWVNLFGHCNEKITNAIKKQVDKLEHVILAGFTHEPIIKLSARLCEKV
                     GRNFNKCFYADNGSSAIEVALKMSFHYHLNKGLKKNKFLSLSNSYHGETLGALSVGDV
                     ALYKDTYKALLLECLSTPVPQGKDYTKELEILKDILEKNASEICAFILEPLVQCAGNM
                     HMYEAGFIDEAIKLCHKFGVQVIFDEIAVGFGRTGTLFALHQCKQSPDFICLSKGITG
                     GFMPLSVVLTRDEIYNAFYDTYESQKAFLHSHSYTGNTLACAAANAVLDIFEDENILV
                     KNQILSEFIKKEFSRLEKFDFLGNFRTCGMISAFDILSTKYKRVGLFVFQKALEKGLL
                     LRPLANTIYFMPPYIITKEQIVYVLESLEQIFKEF"
     gene            complement(11690..12295)
                     /locus_tag="RJ266_000562"
     CDS             complement(11690..12295)
                     /locus_tag="RJ266_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HDV7354339.1"
                     /translation="MQIYVSGIHTDVGKTHFSAAFCANFNYDYFKLIQAGTPTDSEFI
                     AKFSPKTKIFKEGIFLQTPASPHLGKIKEKLDYKALDIILPKSKNLLIELAGGLFSPM
                     DENYTMIDFVNIFKHPTILVAKYYLGSINHILLSIEALKQRNINLLALVMMGKKDILQ
                     DDFIKNYAKIPIINLDFFDENSILNKDFKEQMQEILQLKIP"
     gene            complement(12305..12619)
                     /locus_tag="RJ266_000563"
     CDS             complement(12305..12619)
                     /locus_tag="RJ266_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDV7354340.1"
                     /translation="MEWFYLFLATACEIFGVVIMKELVSTKNKLYLLALIVCFGFSFT
                     FLSLSMQNIAMSVAYAIWTGAGTAGGVMIGVLFYKESKSFLKLFLIAVIITCTAGLKF
                     LS"
     gene            complement(12622..12960)
                     /locus_tag="RJ266_000564"
     CDS             complement(12622..12960)
                     /locus_tag="RJ266_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDV7354341.1"
                     /translation="MNEKFNINIAWFLIILGGIIECFWVSGLKYSTEIWQYILTAIGV
                     CISFTCFLKACERLEVSITYSVFVGIGTIGVVLNEMFIFNEAVSIIKLVLIAILLLSI
                     IALKWVSKEA"
     gene            13094..13630
                     /locus_tag="RJ266_000565"
     CDS             13094..13630
                     /locus_tag="RJ266_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HDV7354342.1"
                     /translation="MLEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNE
                     FIKEVRKKTTLIFDVKVGSQTLSVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPV
                     KITGTAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVPAG
                     VTMIDADRVAVVGVEKAR"
     gene            13627..14172
                     /locus_tag="RJ266_000566"
     CDS             13627..14172
                     /locus_tag="RJ266_000566"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDV7354343.1"
                     /translation="MILVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFTNLTNSKFK
                     GELFKIGSSLLLLKPSTYMNNSGLSVKVVNDFYKCERMIVIHDDIDINLGALRFKKGG
                     SSGGHNGLKSIDTLCGNDYERVRIGVGKGENVISHVLGKFKPEEEITLSKVLEHTKKA
                     LLELIENDDLSAISSKYSLKA"
     gene            14174..15232
                     /locus_tag="RJ266_000567"
     CDS             14174..15232
                     /locus_tag="RJ266_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HDV7354344.1"
                     /translation="MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAAN
                     LDLLYVMFLSFSAVPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFL
                     WALFFCCIYIGLNFTSFAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQ
                     NSAQNIKIFNINDLNLSSFVSAKNAHFEGESWILRDGNITLLPKNYELANDGLKIQDF
                     SELKSLEGFKPKIIEGVASNSDYSISDALESFELFKAQNVNTDALKINLYKFVFTPFF
                     APFLMLIMYYFFPVIARFFNLAIVTFIAFVVTLMIWGVLFLLTRLSENSVIASEIGIV
                     VPIIILGCLSAYMYYKHR"
     gene            15276..16484
                     /gene="lysA"
                     /locus_tag="RJ266_000568"
     CDS             15276..16484
                     /gene="lysA"
                     /locus_tag="RJ266_000568"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HDV7354345.1"
                     /translation="MDYKQLKQEFNTPFYIYNFDFIKECFLNLKEAFKARKSQIFYAV
                     KANSNLSLLQMLANLDSGFDCVSIGEVKRALKAGAKAYKIIFSGVGKTKEELRQALEY
                     DILYINLESEAEMMLLESVAKELNLKARISIRVNPNVDAKTHPYISTGLNENKFGVEI
                     DIARKMYLYAKNSSFLEPVGVHFHIGSQLLDISPIHEAAGIVAKLVRELKALQIDLKF
                     FDIGGGLGVAYEKDECESDLYDYAQGILAQLHGLDLTIGMEPGRYLVAKSGEFVCSVL
                     YEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILPYNQGEESLCDVVGGICESGDFFA
                     KARSLPSTQSDDIMVIKNTGAYGFSMSSNYNTRNKVCELALEEGQVRLIRQRENFEDQ
                     IALEEKFLKA"
     gene            16486..17253
                     /locus_tag="RJ266_000569"
     CDS             16486..17253
                     /locus_tag="RJ266_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIA family hydrolase"
                     /protein_id="HDV7354346.1"
                     /translation="MFFLDVQGTLISDHDKSLIHGAKELIDFLNAKNLPYLIITNNTK
                     KLDFLEKLQQKGLAIKENAYIDPFSVLKHLLRPCKVAAFGADEFVKSLENLGFELDFV
                     NPSAVLVASYDDFKFKDFASMIEFARREVRFIAMHETSIYKKDGRPYPGVGSIMAMLK
                     NAIDFEYEVVGKPSIAFYKEALNLIRRQNSKIDFEDIKIISDDFRGDLLKAKELGMKT
                     LLVLSGKISDTKGLDTDLLDGVYPSVFEFLKDLKCQI"
     gene            17241..18314
                     /gene="pheA"
                     /locus_tag="RJ266_000570"
     CDS             17241..18314
                     /gene="pheA"
                     /locus_tag="RJ266_000570"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HDV7354347.1"
                     /translation="MPNLEEFRNKIDAVDDKILDLLNERMTYVKSIGELKQSSGGSIY
                     RPERERAIINRLKNANLGLLDQNAIEAIYQEIFAVSRNLEMPQTIAYLGPEGTYTHQA
                     ARSRFGAMSRYIALANIEDVFKELSNKEAKYGVVPIENNTEGAVGITLDCLGKYNELK
                     IFGEIYMDIHHSFVGINENLKEIKRIYSHPQGYNQCRKFLESHELSAIEFVPSKSTAN
                     AAYLASQDKYAAAICSRIAAKLYNVPVLFDKIEDNAANKTRFLILSDIKNPKMPNCKT
                     SILAHTAHKPGGLSFLLEQFKKENINLTKLESRPVKSKEFLHSFYIDFEGHIDDENVK
                     KALKDIQEIVWLGSYLSGEKDEI"
     gene            18304..19398
                     /locus_tag="RJ266_000571"
     CDS             18304..19398
                     /locus_tag="RJ266_000571"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDV7354348.1"
                     /translation="MKFNEFLNNLSNYEPGKDIEVIAKEYGVKEVIKLASNENPFGTP
                     PKAIECLRQNANKAHLYPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKL
                     NSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCL
                     PNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNV
                     LYLGTFSKLYGLGGLRIGYGIANANIINAFYKLRAPFNVSNLALKAAVAAIDDDEFTE
                     KTLENNFSQMELYKEFAKKHNIKIIDSYTNFITYFFDEKNSTDLSEKLLKKGIIIRNL
                     KSYGLNAIRITIGTSYENEKFFTEFDKILR"
     gene            19450..21132
                     /gene="fliF"
                     /locus_tag="RJ266_000572"
     CDS             19450..21132
                     /gene="fliF"
                     /locus_tag="RJ266_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="HDV7354349.1"
                     /translation="MDFKNMLHQIGQLYQNLTRKQRIVIAASIVVVVGFLVFLALFRG
                     SGSNANNGYAVLVENVSPSSSAAIVAKLEQNNIPYKLESENKILVPQDQVYRQRMFIA
                     SEGLIKDSRVGFEAFDTQAFGATNEEQKVKYQRAIEGELARTIETLEPIRSAVVHIAF
                     PKDSVFTERQIPPTASVVVNVREGLKLTRKQIDGIKNIVSAAVPKLTKENVKISDQSG
                     VPLDEQEAYEDDLVRAQIKFKSDQEKALEDKIIENLAPFAGGMDKVKVSVNIDFDFSK
                     QESQSEIYDPNPIVRSEQTLNEERTGRKDPEIQGVPGAVSNIGPVEGLDNKGQIDTYK
                     KNQVTTNNELSKTITNTKKQFATVLRTSAAVTIDGKYQDVVDENGDVKSEYVPLTKEE
                     LASVESIVKNTINFSATRGDSVVVQNLPFHRESIRVESKVKTFYNRFVEPFIPPVKYF
                     IAAILLFIFYKKVIAPFTQKMLEDVAAQEEMQQGPNAVLDDAEDALEKFNAARKKVEE
                     QLGFGDNFNEDSIQYEVLLEKLRGLVSDKGEEIAALLQNLIQNDSEFGEKDM"
     gene            21132..22160
                     /gene="fliG"
                     /locus_tag="RJ266_000573"
     CDS             21132..22160
                     /gene="fliG"
                     /locus_tag="RJ266_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HDV7354350.1"
                     /translation="MIKLSEEQKMVYDDLSMPEKVAIFLIQLGEDATTSVFSHMEIDV
                     ITEISRYIAMAKNVDRSVATAVLEEFYTLLQSNQYIKSGGLEYAKEILFRTFGPEIAN
                     KILEKLTKSMENNQNFAYLAQIKPQQLADFITKEHPQTIALILAHMDSIHAAETLEYF
                     SDELRAEVVIRMANLGDISPSIIKRVSAVLESKLESLTSYKVEVGGPRAVAEVLNRLG
                     QKASKSTITYIEQSDERLAETIKELMFTFDDIQKLSTQAIREILKVADKRDLMIGLKG
                     ASEELKQKFLANMSTRASEAFLEEMGFLGAVRVKDVEDAQRKVVEVVQKLAEQGLVQT
                     GDADEMIE"
     gene            22168..22998
                     /gene="fliH"
                     /locus_tag="RJ266_000574"
     CDS             22168..22998
                     /gene="fliH"
                     /locus_tag="RJ266_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HDV7354351.1"
                     /translation="MVNRSNVISGGASDQHVVEGYRFKVISEFDNHTGEKKHTQTPDE
                     ENTNISLNDEKPVEENQVIASTQAVMETQIPTFQPSFVEDLLKKTDEMSSNIIKLQMQ
                     IESQENEFNNRLNSELENAKEKFTKEGYEKAKEEFQKELSDFKDKYLKSIAKLDNACE
                     NLENFIEKNEKELADTAIDIAKEVILKELELNSSKIAYALAKDLIGELKGASAIELKV
                     NAEDYEYLKEQFDQNAHIKISLDDAISKGSVVIISDAGNIESNLNSRLTKIKKMVNNE
                     "
     gene            22991..>24825
                     /locus_tag="RJ266_000575"
     CDS             22991..>24825
                     /locus_tag="RJ266_000575"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HDV7354352.1"
                     /translation="MSKKFAHTQEELEKLSLKELENLAASMREKIIQVVSKNGGHLSS
                     NLGAVELSIAMHLVFDAKKDPFIFDVSHQSYTHKLLSGKEEIFDTLRQINGLSGYTKP
                     SEGDYFVAGHSSTSISLAVGACKAIALKGEKRIPVALIGDGALSAGMAYEALNELGDS
                     KFPCVILLNDNEMSISKPIGAISKYLSQAMATQFYQSFKKRIAKMLDILPDSATYMAK
                     RFEESFKLITPGLLFEELGLEYIGPIDGHNLGEIISALKQAKAMQKPCVIHTQTIKGK
                     GYALAEGKHAKWHGVGAFDIDSGESVKKSDTKKSVTEIFSKNLLDLASKYENIVGVTA
                     AMPSGTGLDKLIEKYPNRFWDVAIAEQHAVTSMAAMAKEGFKPFIAIYSTFLQRAYDQ
                     VIHDCAIMNLNVVFAMDRAGIVGEDGETHQGVFDLSFLAPLPNFTLLAPRDEQMMQNI
                     MEYAYLHQGPIAFRYPRGSFILDKEFNPCEIKLGKAQWLVKNSSEIAFLGYGQGVAKA
                     WQVLRALQEMNNNANLIDLIFAKPLDEELLCELAKKSKIWFIFSENVKIGGIESLINN
                     FLQKYDLHVKVVSFEYEDKFIEHGKTSEVEKNLEKDVNSLLTKVL"
BASE COUNT         8736 a         3489 c         4245 g         8355 t
ORIGIN      
        1 tgaagcttta aaaaaatatg ttaaaatcca aattttatct tttgcaagga aaagcaatga
       61 aagaaattct tatcactaat gacgatggct atgaaagcga aggacttaaa aaactcatta
      121 agatgttaca aaaagaattt aaagccaaga ttaccatagt agctcctgct agtgaaaaat
      181 cagcttgttc acactccata accctaacca aacctttgcg ttttgttaaa gtaggaaaaa
      241 gattttacaa acttgatgat ggcactccag cagattgtgt ttatcttgca cttcacgcac
      301 tttataaaac acgcttgcct gatcttgtaa tcagtgggat taacaaagga gcaaatgtag
      361 gcgaagacat tacctactca ggaacttgtg caggagctat ggaggcggtt ttacaaggaa
      421 ttccagccat agctctttcg caattttaca aaaaaagtga aaaagagctt gattttaaaa
      481 atgctttaaa aattactaaa aaaatcgttc aaaatatttt tgataaaggc tttcctttag
      541 gaaaaaaaga atttttaaac attaattttc cagcaaaatc caatataaaa ggcattaaaa
      601 tttgtaaagc aggtaagcga gtgtataatt ttgaagcgca ttcaaatatc aatccacgcg
      661 gagtggagta ttattggctt gcagcagcga atttagactt tgaagatgag aaaaatagcg
      721 atattgcctt acttaaaaaa ggctacgcta caataacacc tataatgctg gatcttacag
      781 cttatgaaag aatgaaaaaa gttaaaaaat ggttaaaggc aaaagaatga atgatagatt
      841 tacgcgtata aaatggctcg ttggagaaga aaaatttcaa aaaatttcac aaacaaaagt
      901 tttggtttgc ggacttggtg gagtgggtgg aatttgcgtt gatgcgcttt atcgtagcgg
      961 ttttaaaaac cttactttaa tcgatgcgga caaatttgaa atcaccaatc aaaatcgcca
     1021 aattcatagc gaaaatatag gcgaagaaaa ggctaaagta tttgaaagaa tttataaggc
     1081 taaaggtata gtcagtaaaa tcgatgaaga ttttttagaa aaatttgatt taagcgagtt
     1141 tgatcttatc atagatgcca ttgatgatat ccctgcaaaa gtggctttgg ctcatcttat
     1201 agattttaaa aaacaaattt ttatctcttc aacaggtgga gctagaaagc ttgatccaac
     1261 acgcattaaa actacaagta tttttaaaac tcacggcgat gctttagcga aaaaatttcg
     1321 ttatgaactt agaaaatcag gctttaaagg aaattttgat gtggtatttt cagatgagga
     1381 agcgcattgt aaagatcttg gatcttttat gggtgtgact gcatcttttg gtttagccct
     1441 agccagcttg gcattaagaa aagttcttgc taagaaaagc tgatattaaa gatttaaatg
     1501 cttgtttgtc gctttttgag caaagcgtaa aaacactttg tgctaaggat tatacaaaag
     1561 atcaaatttg tgcttggatt aaaattgata gacaacaatg ggaagaaaaa tttaaatatg
     1621 atgagatctt tgtctatgaa aaaagaggaa aaataagtgt taaacaagag cagaaattgc
     1681 ttgatttgct ttttactcat cctgattttg ttagacaagg tttagcacaa aatttacttg
     1741 attttatttt aaaaacttat ttgcataatg aaatttacac tttcgcatcc ttaagtgcta
     1801 aagatttttt cttaaaaaat ggttttgaac ttataaggga aaacaaggtt atcaaagagg
     1861 gacaaaattt aaaaaaattt ttaatgaaaa aagatgtggt ttataaaaac tagaagttaa
     1921 gataagcaaa aataatggat taaaagatat aaaaatcatt ttttacttat cttagataaa
     1981 tgaatttatc taagatagaa aaaattacaa aaatagctag atgttagaaa atagctccgt
     2041 gtttttcata atttgttatt tttgtagcag tgttattttc atccacaaaa acaacttttg
     2101 gtttaaatgt ttttgcttct tcttcattaa aatcagcata agacatgatg atcaccttat
     2161 ctcccacttc tgcaagacga gccgcagcac catttaagca tacaactcct tcttcttgcg
     2221 tggctatggt ataggtttca aatctagcgc cattattgac attgactact tggacttttt
     2281 cgtattctaa aattccactc gcttgcaata atttttcatc tatacttata cttcctacat
     2341 aatcaagcct agcttctgtt acgctcgcgc gatgtatttt tgatttgagt aaagtgatat
     2401 tcattttaat ccttgtacta aaaaattatc aatgagtctt gtttttccaa caaaagcagc
     2461 caccgctcct aaaacattat cagtgatatt ttcgatattt tccatggtgt taaaatcgac
     2521 taattctata taatcgatct tgattagttt ttctttttct aaaatatctt tcatagcttg
     2581 gatgatctta gaagtatttt tttctccctc tcggactaat ttttcagcca aaaaaatgct
     2641 ttgagatata gttagtgacg cttttctttc ttctttgcta agatatacat ttctagagct
     2701 tttagctaag ccatcttctt ctctaatgat aggacaaatt tgaattttta aatcaaaatt
     2761 taaatcatca accatatgcc taacgactac gcattgttgc gcgtcttttt gccccatata
     2821 gactatatca gggtttagga tattaaaaaa tttagttaaa accgtgcaaa cgcctctaaa
     2881 atgccccggt cttttagccc cgcaaagttt atcagtgatc gtattcatat ctacataggt
     2941 gctaaaattc ttaagataca tttgagttgc atcggggata aaaaccatat caacgccatt
     3001 atcttgacac attttaatgt cgcgttctaa atctcttgga taactagaaa aatcttcatt
     3061 aggcccaaat tgcataggat ttacaaagat acttactata accttatctt gtgttttggc
     3121 atgtttgact aaacttaaat gtccatcgtg taaaaaaccc atggttggaa catagcctat
     3181 actaagttga tgtgatttcc aatcttttac aatttgtttt gcttctttga cagaagtaat
     3241 gacttgcata tttgtatcct tagtataatt tatctaataa ttcatcatct aaataatcaa
     3301 agctgtgctc ttgggaagga aaaataccgc ttttaacttc atctctatat ttttcaactc
     3361 ctacttgagg atcaatttta tcaaaatgct ttacaaattt tgctttaaaa tctttattta
     3421 aacccaaaag atcgtgataa actaaaactt gtccatcgca gtatttgcct gaacctatgc
     3481 cgattgttgg aatttctaaa atagagctta ttttttgtgc tagttttaca ggcacacatt
     3541 ctaaaaccaa catacaagca cccgcatctt gcacagcttt tgcatcatct ataatttttt
     3601 gggccgattg taaatcttta ccttgaaccc tatagccacc tagcatattt acagcttgtg
     3661 gggttaaacc taggtgagca acgacgggta ttcctgattg ggaaatcaat ttaatcttgc
     3721 ttgcgatttc tataccccct tccactttta ccccatttgc gtggctttct ttgataaatc
     3781 ttgaggcatt taagatagcg tcacgatctg aactttgata agacataaaa ggcatatcag
     3841 caagtacgaa agacttttta gctccgcgag aaacagcttt ggtaaaaatc aacatttcat
     3901 ccatagtaac acttaaagta tcttgcatac caagtaccgt catggctaat gaatctccaa
     3961 ccaatataat atctatatcg ctattgtcta aaattcttgc actatgataa tcatacgcac
     4021 ttaccatggt tattttttca tttttggcct ttttttccaa aaaactaatc atactttttc
     4081 tcattttgca tacctcaatt tttagctata aaataataag caaaaaacta gcatataatt
     4141 tttcataaat agtaaatgaa tgataaagta agttatattt aatcgatgga ttgctttaat
     4201 ggtcacaatt ttagaaaatt tcagttcatg ttaaaggata tttaaagaaa ataaagcttt
     4261 aaaaagtatt ttgtttaaaa ttatttaaca tagaaagata ttttatgaaa aaaataactt
     4321 tatttttact tttcttaaat ttagtgtttg ggcaagataa gatattaaat aattggttta
     4381 aagagtataa tacaagcggc acttttgttt tttatgatgg aaaaacttgg gcgagtaacg
     4441 acttttcaag ggctatggag actttctctc ccgcttccac ttttaaaatt tttaatgctt
     4501 taattgcact tgatagtggt gtgataaaaa ctaaaaaaga aattttttat cactatagag
     4561 gtgaaaaagt atttttatct tcttgggcgc aagatatgaa tttaagttca gctataaaat
     4621 attctaatgt tcttgctttt aaagaagtgg caagaagaat tggtatcaaa actatgcaag
     4681 aatatttaaa caagcttcat tatggtaatg ctaaaatttc caagatcgat actttttggc
     4741 ttgacaactc actaaaaata agcgctaaag aacaagcaat tttgcttttt agactttcac
     4801 aaaatagctt acctttttct caagaagcaa tgaatagtgt taaggaaatg atttatttaa
     4861 aaaatatgga aaatttagag ctttttggaa aaacaggttt taatgatgag caaaaaattg
     4921 cttggattgt aggttttgtg tatttaaaag atgaaaataa atataaggct ttcgcgctaa
     4981 atttagatat tgataaattt gaagatttat ataaaagaga aaaaatttta gaaaaatatt
     5041 tagatgaact tgtaaaaaaa gttaaaaatg atggctagtg agtatttcgt aaaatgcaaa
     5101 aatacttaat tgtatgattt gcgtacactt aaagtactca ttaaaaaatt aaatttttac
     5161 tcttatttat caagttttcc tacgatgata gggttaaagg cttttatgga tagcaaaagc
     5221 gtatcgccga tttttacatc tttataagat tttaaaaatt cctcttcgct aagtgtgatt
     5281 ttaacgatat cttgatttaa aagcaaagta aaaataacta aaatatcact ttttttcatc
     5341 tcaagcaaag tcgcgctcaa gcgcaatttc gcacttaaat ttgatgaggt aaaaaattca
     5401 tttattcttg catctttgat gatttttcca tcactaagct ctaaaattct atggctcaat
     5461 ttgtaaattt cagccaaatc gtgacttact aataaagtcg tgattttaaa atgttgtaaa
     5521 attttcacaa gctcatcttg taaaaaagat cgcattttaa agtccaatgc actcaaaggc
     5581 tcatctaaaa gtaaaatttg tggctctctt gctaaagccc ttgctaaagc cactctttgt
     5641 gcttgtccgc cacttaaatt tttgggataa attttggcta aattttccaa attcattaag
     5701 cttaaaagct cttctgcttt ttgttttgaa gtcgcagcat aaaaaatgtt ttcttttacg
     5761 ctcatatttg gaaaaagagc gtaatcttga aaaacaaagc cgatttttct tttttgtatg
     5821 gctaaattga catttttttg ggtatcaaac caaagctcat ctcctacttc tatgcgtcca
     5881 aattcaggtt ttataagtcc tgcaatgatt ttaagtagag ttgtttttcc cgcaccgctt
     5941 tccccaaaaa tagcagtgat ttcatttgct tttaagcaag tgtttaattc tagttgcttc
     6001 ttgccttttg ctgtgttgat gggaagtttt atatcgattt ttatcataaa agtggcctat
     6061 agagcgattt ttttatttac aaaataaaga cttaagagta tggtaaaaga aatcgcaaat
     6121 aaagtaaaag cgtattgatg tgctaaagta tagtttaaaa cttcaagctc atcataaata
     6181 gcaatacttg cgaccaaagt ttcacctttt ttatgtccac ctatcatcat caccactcca
     6241 aattcaccga tagtgtgtgc aaaactcatc gcacaagcgc taaaaatccc tactttagaa
     6301 ttgggcaaaa ttactctaaa aagtgtgtaa attttaccct ttcctagagt ataagaagca
     6361 tcaagtaggt tttgattgat cgatgaaaaa gcgctttgta aaggatttac cataaagggt
     6421 agggaaaaaa tcaaagaagc aaataccaaa ccttcaaagc taaaaaccaa agaaaggtta
     6481 aaatattctt ttaaaaattg tcctaaaaag ctgttttgtg aaaagcttat gagcaaataa
     6541 aaacccaaaa cacttggagg caaaaccaag ggcaaagcta caaaggtttg caccaagctt
     6601 ttaaaaggaa atttcacaaa gcttaaaaga taggctaaaa atactccgat gaaaaagagc
     6661 ataaaggtgg tgataaatgc aagtttaaag gtaagataaa gggtttgtaa aaaatcatta
     6721 tccataaaca gcctttaaaa tgatatcatt ttccttgaca aagcaaagcc attcttgtcc
     6781 ttcttcaagt ttgagctcta aggctttttc tttggtgata atgctagaaa tttcatcacc
     6841 ctcaaaatca aaaaagatat gatatagaat tttgcctttt ttgatacttt taatccttgc
     6901 tagaaatgaa ttttccacac ttaaaataga atggggtaaa gtaaagccaa gttcgtgttc
     6961 tttgaaaagt acttgaattt ttgtacctat tttaagatct tgcaaagaat gaagatcaag
     7021 cattaaaact ttaaaaattt gctctttaat actgatctta acgatgacaa tctcaccctc
     7081 atttaaaagc tctataatct taccatttaa gatattcaag gtgtgtcaaa tccgtatttt
     7141 ttaaagattt cttttgcttt ttgcgaactg ataaaatcgc taaattcaaa ggctaatttt
     7201 ttatctttag cgtattttgt gatgacatag ctttgtttta aaggagtgaa gtatttttga
     7261 tcaattaaaa tagctttgcc tttaggatga ttgatagaag atactagaga ataagccaca
     7321 atacccaaat ccgcattatt gctatcgaca tgtaaaacag gcacggagat attttcacct
     7381 aaaacaattt tatcttcaaa gagtttgtct aaatttaaat tttcaagcac ttctttagca
     7441 gctactccat aaggagcaac ctttggattt gcaaggctta ggtgatgaat tttatttgct
     7501 ttatctttta gcttttctat cccaccttca agtaagcttt catctaagct atatagggct
     7561 aagataccta aaacataaac ttttggttta tctaaagcgt tttgatcctc ataaattgct
     7621 tgcgcgtatt ttgtatcggc tgaaaaaaat agatcaaatt cccgcccttg tttcaaaagt
     7681 tgataatact ttcctgaagc gccaaaaaca agatctatat tgtcattagg gtgtgatttt
     7741 aaaaattcat ttttgacctc ttccatagct tttgaagccg aagaagctac gaaaacactt
     7801 aaattttgtg catttaaatt taaagataaa aacaacacta taaaacataa cacgagcttt
     7861 ttcattgcac tttcctttgt cgataatctt gattttttgt attataacat aagaaatttt
     7921 attttgtatc ttttttgcat aaaataaaaa taggatgata agtgagttta ttttgaaatt
     7981 tttcttcaaa ttcttttaaa aattgcttgt ttaagcgata aaatcccaaa gaatttactc
     8041 cgcttaattt taaatgttta aaaacttcta aagcgttttg aaattccaaa tttacaattt
     8101 cttctgtgat tttaatatcg gaaaaatagg gtttgaaaat ttgttcaagt tcttttgtgc
     8161 taaaatattt taaacccaag cttgtgcttt gtttgatctc ttttaaattc atttctccaa
     8221 aagtagaaag aagtaaaatt ccttttttat ttagcatatt tgctagcgtg ggcaaaacct
     8281 gctttaaatc aagccattgc aaacttgcat tagaagtgat aagatcaaat ttttgcttgc
     8341 ttaaattctg tgtagctagg gtattcatat caaaaatttc tacattaaga ttatcaggat
     8401 aatccaaaat atcatttttt aaatattcat caaaagtgat aatttttgaa agtttgtcgc
     8461 taaattcgcc cctgccacaa ccaaattcaa acactttttt aaaatgcgaa atttctaaat
     8521 tttttaaaat ttcacaaagt tttaagccca ttaaatcttg cacttttgcg tgtttttgat
     8581 aatcttttgc ttttaaaaaa ttcaaatttc atcccaagtt ttaaaatgaa aaaaagcaaa
     8641 atgcggttca tctaaaaaaa tcaaattttt aaaactattt ttcaaggcat ttggtggaaa
     8701 aatttcatct tttttacttg aataaacctt atcccaaagc aaattttctt cttgttttac
     8761 taaagcaaag tcaaaaagtt tttcaagctc tatttttaaa gctttttcat ctttaaaaat
     8821 aaaatcttta gttaaatttt tgcgttcttt aaataaagct tctttgaaat tttctaattt
     8881 gaaattttgc aaggtttttc taaaaattgc aggatgaatt ccttttgatt tatctatgcc
     8941 taaatttgtg ccatttatgg ctattttttg tttaaaatta agctctttta aaagtctatt
     9001 tgccacacaa acccccatag aaaaagcgat taaaaaaagt tcatcaaaag ctttgaaatc
     9061 aaaatttaaa tcaaaatttt cataatcata aaataaaatc acatttttat cgctttttaa
     9121 atgcgaaaaa tgactagaat gtgaagcaaa tcccccaaat accactataa gtttttttga
     9181 atcaggattt ttacataaaa attcatattt cataaaagct ctattatcct ttcaagttct
     9241 tctgtgttaa gtcctgcgtg caaagaaaaa cgaattctgg ctgtattttt tggcacggta
     9301 ggttctttga tcgcaggagc aaaaaaacca gctttttgaa gtttttgtga aatttctaag
     9361 gcttttttat tttcacctaa aagtaagcaa atgatataag catcgcctaa aacgatgtga
     9421 tttttttctt gcaatttact tttaaaaaaa gtgcttaaaa gctctaattt ttctctttct
     9481 ttcttaaaat aaggcatttt tttaaaaata aattgcgtcc aagctacatt aataggtggc
     9541 aaggctgtag aataaataaa agctctagcc ttgttgatga aaaatttctt atatttttca
     9601 tcacatatta tacaagcacc catggaagca agggcttttc caaaggtaaa aaccaaaaaa
     9661 tccacttcat tttctaaggc tagtttttta acaagcccca aaccctcttc atcaaaacaa
     9721 cccacgctgt gtgcttcatc tatataaagc ttaattttat cataacgcct tttaagctca
     9781 cacagagttt taaaatcgct aaaatctcca tccatactaa acaaagcttc gcttaaaacg
     9841 atgatatttt cataattttc ataatgtttt tggattaaac tctctaaatg attcatatct
     9901 ttatgatgaa aacgaaaaaa atcagccctg ccaagtctta agccatcaat catacttgca
     9961 tgaataaatt tatcggttag aaaaagcgtc ttagaaacgc tagaaagtgc tgctatacaa
    10021 gagatattta gatgatagcc actattaaaa tgtaaaattt ccttatcttt aaatttagtc
    10081 tttaaaaaac tttctaattt ttcataaatt tcaaaatttc cactcaaact tcttgaactc
    10141 gaacttgaaa aaaacaaatc ttgttctttt agggtgttta aaaactcagc ttttaactct
    10201 ttggaagacg ccaaataaag ataatcattt cctactaaat ttaaaagttt gtgatcttgc
    10261 ttataaacaa atttattttc atgttttaaa ggtgttagag ttcttagatt gtgattttgc
    10321 tctagatctt gcaaaatttt ttcaagcttc atttttttcc tgtaaattta aaaatttaaa
    10381 gtattatttt gccaaaatat ttttaaaaaa gaagttataa tgcaaaatca aatcttaaaa
    10441 aatctcgatt taaaacacat ttggcaccct tgcacacaaa tgaaagatca cgaaacccta
    10501 cctttaattc ctataaaaaa agcaaaaggt gtatggcttt atgattttga tgataaagct
    10561 tatatggatt gtgtgagttc ttggtgggtc aatctttttg gtcattgtaa tgaaaaaatc
    10621 acaaatgcca ttaaaaaaca agttgataag ctagagcatg tgatcttagc aggctttaca
    10681 catgagccca tcatcaagct ttctgcaaga ctttgcgaaa aagtaggcag gaattttaat
    10741 aaatgttttt atgcagataa tggctcaagt gccattgaag tagcacttaa gatgagtttt
    10801 cattatcatt taaataaagg tttgaaaaaa aataaatttt tatccctaag caattcctat
    10861 catggcgaaa ccttaggagc cttaagtgtg ggcgatgtag cgctttataa agatacttac
    10921 aaagccttgc ttttagagtg tttaagcacg cctgtgccac aaggcaaaga ctacactaaa
    10981 gagcttgaaa ttttaaaaga tattttagaa aaaaatgcaa gtgaaatttg tgcttttata
    11041 cttgaaccct tggtgcaatg tgcaggaaat atgcatatgt atgaagcagg gtttattgat
    11101 gaggccataa agctttgcca taaatttgga gtgcaagtga tttttgatga aattgcagtg
    11161 ggctttggac gcacaggaac tttgtttgcc ttacatcaat gcaaacaaag ccccgatttt
    11221 atctgccttt caaaagggat aacgggtgga tttatgccac tttctgtagt gcttacaaga
    11281 gatgaaattt ataatgcttt ttatgatact tatgaaagcc aaaaggcttt tttacattct
    11341 catagctata cgggaaatac cttagcttgc gcggcagcaa atgcggtttt agatatcttt
    11401 gaggatgaaa atattttagt aaaaaatcaa attttaagcg agtttatcaa aaaagaattt
    11461 tcaagacttg aaaaatttga ctttttgggt aattttagaa cttgcgggat gatcagtgct
    11521 tttgatattt taagcaccaa gtataaacgc gtaggacttt ttgtatttca aaaagcctta
    11581 gaaaaaggtt tgcttttaag acctttagca aatacgattt attttatgcc tccttacatc
    11641 atcacaaaag aacaaatcgt ttatgtacta gagagtttag agcagatttt taaggaattt
    11701 taagttgtaa aatttcttgc atttgctctt taaaatcttt atttaaaatg ctattttcat
    11761 caaaaaaatc aagattgatt ataggaattt ttgcataatt ttttataaaa tcatcttgta
    11821 agatatcttt tttacccatc attacaaggg ctaaaagatt gatatttctt tgctttaaag
    11881 cttcaatgct aagcaagata tgattaatgc ttccaagata gtattttgct accaaaatcg
    11941 tagggtgttt gaaaatattc acaaaatcaa tcatagtgta attttcatcc ataggagaaa
    12001 aaagcccacc cgcaagctca ataagtaggt ttttgctttt tggtaaaatg atatctaagg
    12061 ctttataatc aagcttttct ttgatttttc caagatgagg agaagctgga gtttgcaaaa
    12121 aaataccttc tttaaaaatc tttgtttttg ggctaaattt tgcaataaac tcgctatctg
    12181 ttggagttcc tgcttgaatg agtttaaaat aatcatagtt aaaattcgca caaaaagctg
    12241 cgctaaaatg tgtttttcct acatcagtat gtattccact tacataaatt tgcacaaaaa
    12301 atcctcaaga aagaaatttt aaacccgctg tacaagtaat aatcacagcg attaaaaaaa
    12361 gtttcaaaaa acttttactt tctttataaa aaagcactcc tatcattacc ccaccagcgg
    12421 ttccagctcc tgtccatata gcataagcaa cgctcatagc gatattttgc atacttaagc
    12481 ttaaaaaagt aaaagaaaat ccaaaacaca ctatcaaagc taaaaggtaa agcttgtttt
    12541 tagtgcttac aagttctttc atgatcacca cgccaaaaat ttcacaggca gtagctaaaa
    12601 acaaataaaa ccattccata actaagcttc cttgcttacc catttaaggg ctataatact
    12661 taaaagtaaa attgctataa gcacaagttt aattatagaa acagcttcgt taaaaataaa
    12721 catttcattt aaaaccaccc caatagtgcc aatgcctaca aaaacactat aagtaatact
    12781 tacttcaagt ctttcacaag cttttaaaaa gcaagtaaaa gaaatacaaa ccccaatggc
    12841 tgttaaaata tactgccaaa tttctgtaga atatttaagt ccacttaccc aaaagcattc
    12901 tataatccca cctaagatta ttaaaaacca agctatatta atattgaatt tttcattcac
    12961 atgaagcctt aaattaacat aatatttgta aaacaaatta tatcttaaag aaattaaaag
    13021 aagctataaa tttacttttc cataagccaa aattagatat aatcaaagct cattttttaa
    13081 gaaaggataa aagatgttag aaggtatcgt tagagagagt atcggtagaa aagctgctaa
    13141 agctttaaaa agagatggtt atctaatcgc aaacatctat ggaaaaggat tagaaaacat
    13201 caatgccgct tttaaagtaa atgagtttat taaggaagtt cgtaaaaaaa ctactttaat
    13261 ttttgatgta aaagtaggtt ctcaaacttt aagcgttgta gttgtggatt atcaaaaaga
    13321 tcctgtaact gcagaactta aacatgtgga tttaaaagtt gcacaaaaag gtgtgatttc
    13381 taaatacatg gttccagtta aaatcacagg aacagctata ggtcttaaaa ataaaggtgt
    13441 tttaatccaa tcaaaaagaa gattaaaagt aaaatgtgca gctgaaaatt taccaaattt
    13501 cttcgaactt gatgtaagta aacttgatgt gggtgatgct ttacttgttc gtgatattgt
    13561 agttcctgcg ggagtaacta tgattgatgc tgatagagta gcggttgtag gtgtagaaaa
    13621 agctagatga ttttagtcgt agggcttggc aatataggcg tagagtatga aaatacccgt
    13681 cataatgtcg gttttatgct aattgacttg cttttaaaag aaagcaattt tacaaatctt
    13741 acaaactcta aatttaaagg agaacttttt aaaataggtt cttctttgct tcttcttaaa
    13801 cctagcactt atatgaataa ttcaggactt agtgtaaaag tagtgaatga tttttataaa
    13861 tgcgaaagaa tgatagttat ccatgatgat atagatataa atttaggagc cttgcgcttt
    13921 aaaaaaggcg gttcaagtgg tggacataat gggcttaaaa gcatagatac tttatgtgga
    13981 aatgattatg aaagagtgcg tataggagtg ggaaagggtg aaaatgtgat ttcccatgtt
    14041 ttaggtaaat ttaaacccga agaagaaata accttaagca aagttttaga gcatacaaaa
    14101 aaagctttgc ttgagcttat tgaaaatgat gatttgtctg ctatatcatc taaatacagc
    14161 ctaaaggctt aagatgtgga tattttttcg ttttatttca gggatttatt taaaaaattt
    14221 ttttattata tttttttctt tacttggttt ttattgcggt attgatttgc tcttaaattt
    14281 taaagatcta ccaaaagccg caaatcttga tttgctttat gttatgtttt tatctttctc
    14341 ggcagtgcct tatgtattac ccatttcttt gatttttgcc ttggtagttt ctttgatttc
    14401 catgatcaga gcaaatgaat ttgtaagtct ttatgcgtta ggactgagca gaaattatgt
    14461 tattttattt ccttttttat gggctttatt tttttgttgt atttatatag gattgaattt
    14521 tacttctttt gcttatgcaa atgattataa gagaaatatt ttaaaaaatg gtactattat
    14581 gaatcaaagt ggagaagtgt ttttgaaatt taacaataat tttgtttata tttcaaagat
    14641 aaacaatgga caaaatagtg ctcaaaatat aaaaattttt aatattaatg atttaaattt
    14701 aagctctttt gtaagtgcta aaaatgccca ttttgaaggt gaaagttgga ttttgcgaga
    14761 tggcaatatt acattattac ctaaaaatta tgaacttgct aatgatggtt taaagataca
    14821 agatttctcc gagcttaaat cacttgaggg ttttaaacca aagattatag aaggggttgc
    14881 tagtaatagt gattattcaa tatctgacgc acttgaaagt tttgagcttt ttaaggcaca
    14941 aaatgtcaat acagatgctc ttaaaatcaa tctttataaa tttgttttta ctcctttttt
    15001 tgcaccattt ttaatgctta ttatgtatta tttttttcct gtaatagcaa gattttttaa
    15061 tcttgctatt gtaactttta tagcttttgt agtgactttg atgatttggg gagtcttgtt
    15121 tttgcttact agattaagcg aaaatagtgt gattgcaagt gaaattggca ttgtagtgcc
    15181 tattataatt ttgggttgtt taagtgctta tatgtattat aagcatcgat aaattaagct
    15241 ttatgtagta aaattataaa aattaaaggt taaatatgga ttataaacaa ttaaagcaag
    15301 aatttaatac tcctttttat atttacaatt ttgatttcat aaaagagtgt tttttaaatc
    15361 tcaaagaggc ttttaaggct agaaaatctc aaatttttta cgctgtaaaa gccaattcaa
    15421 atttaagttt gttgcaaatg cttgcaaatt tagatagtgg atttgattgt gtaagtatag
    15481 gcgaggtaaa gcgtgcctta aaagcaggag caaaagctta taagattatt tttagtggag
    15541 taggaaaaac caaagaagag ttaagacaag ctttagaata tgatatttta tatattaacc
    15601 ttgaaagcga agctgaaatg atgcttttag aaagtgtggc taaagaactt aatctaaagg
    15661 caagaatcag tattcgtgtt aatccaaatg ttgatgcaaa aactcatcct tatatttcta
    15721 caggattaaa tgaaaataaa tttggtgtcg aaattgatat agcaagaaaa atgtatcttt
    15781 atgcaaaaaa ttcatctttt ttagagcccg ttggagtgca ttttcatata ggttcgcaac
    15841 ttttagatat ttctcccatt catgaagcag caggcatcgt tgcaaaactt gtaagagagt
    15901 taaaagcctt gcaaatcgat cttaaatttt ttgatatagg cggtggtttg ggtgtggctt
    15961 atgaaaaaga tgagtgtgaa tctgatcttt atgattatgc acaaggtata ttagcacaac
    16021 ttcatgggct tgatttaact ataggaatgg agcctggaag gtatctagtt gctaaaagtg
    16081 gagaatttgt ttgttcagtg ctttatgaaa aacaaaataa aaccaagcgt tttgttgtag
    16141 tagatggagc gatgaatgat cttatacgcc caagtttata cgaggcttat catgaaataa
    16201 tcttacctta taatcaaggc gaagagagtt tatgtgatgt tgtaggtgga atttgtgaga
    16261 gtggggactt ttttgctaaa gcaaggtctt tgcctagcac tcaaagtgat gatataatgg
    16321 ttattaaaaa tactggagct tatggtttta gcatgagtag taattacaat actcgtaata
    16381 aagtttgcga attagccctt gaagaaggac aggtaagatt gatccgtcaa agagaaaatt
    16441 ttgaagatca aatcgcttta gaagagaaat ttttaaaggc ttaaaatgtt ttttttagat
    16501 gttcaaggga ctttaatttc tgatcatgac aagagtttaa tccatggtgc taaagaattg
    16561 atcgattttt taaatgcaaa aaatcttcct tatcttatca ttactaacaa tacaaaaaaa
    16621 cttgattttt tagaaaaatt acagcaaaaa ggattggcta taaaagaaaa tgcttatatt
    16681 gatcctttta gcgttttaaa acacctttta agaccttgta aagttgcggc ttttggtgca
    16741 gatgagtttg taaaaagtct tgaaaatctt ggttttgaac tcgattttgt aaatcctagc
    16801 gctgtacttg tagctagtta tgatgatttt aaatttaaag attttgctag tatgatagaa
    16861 tttgctagaa gagaagttag atttatagct atgcacgaaa ctagtattta taaaaaagat
    16921 ggtaggcctt atcctggtgt aggtagcatt atggctatgc ttaaaaatgc tattgatttt
    16981 gaatacgagg ttgtgggtaa gcctagcatt gctttttata aagaagcttt aaatttaata
    17041 agaagacaaa attcaaaaat cgattttgaa gatattaaaa tcattagtga tgattttagg
    17101 ggtgacttgc ttaaggcaaa agaacttggc atgaaaacct tgctagtttt aagcggcaag
    17161 ataagcgaca caaaagggct tgatacggat ttgcttgatg gagtttatcc tagtgttttt
    17221 gagtttttaa aggatctaaa atgccaaatt tagaagaatt tagaaataaa atcgatgcgg
    17281 ttgatgataa aattttagat cttttaaatg aaagaatgac ttatgttaaa agtataggtg
    17341 agcttaagca aagtagtggg ggaagtattt atcgtcctga gcgtgaaaga gccattatca
    17401 atcgtttaaa aaatgcaaat ttaggacttt tagatcaaaa tgccatagag gcaatttatc
    17461 aagaaatttt tgcagtttca agaaatttag aaatgcctca aactatagct tatttagggc
    17521 ctgaaggaac ttatacacat caagcagcaa gaagtcgttt tggtgcgatg agtcgttata
    17581 tagccttggc taatatcgaa gatgttttta aagagttaag caacaaagaa gcaaaatatg
    17641 gtgttgtacc tatagaaaat aataccgaag gtgcagtggg cattacttta gattgtctag
    17701 gtaagtataa tgagcttaaa atttttggcg aaatttatat ggatattcat cattcttttg
    17761 taggaattaa tgaaaattta aaagaaatca aacgcattta ttcgcatccg caaggttata
    17821 atcaatgtcg taaattttta gaaagtcatg aacttagtgc tatagaattt gttccttcaa
    17881 aatctacagc taatgcagct tacctagctt cgcaagataa atatgcggca gcaatttgtt
    17941 ctagaatagc ggctaagctt tataatgtgc ctgtactttt tgataaaata gaagataatg
    18001 cagccaataa aacaagattt ttaattttaa gcgatattaa aaatcctaaa atgccaaatt
    18061 gtaaaacttc tattttagca cacacagcac ataaacctgg gggacttagc tttttattag
    18121 agcagtttaa aaaagaaaat atcaatctta ctaagcttga atctcgccct gtaaaatcaa
    18181 aagaattttt acacagtttt tatatagatt ttgaagggca tattgatgat gaaaatgtaa
    18241 aaaaagcctt aaaagatata caagagattg tttggcttgg atcttattta tcaggagaaa
    18301 aagatgaaat ttaatgaatt tttaaataat ttaagcaatt atgaacccgg caaagatata
    18361 gaagttattg ctaaagaata tggcgttaaa gaagtgataa aattagcaag caatgaaaat
    18421 ccttttggca cgccaccaaa agctatagaa tgtttaagac aaaatgcaaa caaagcccat
    18481 ctttaccctg atgatagtat gatagaactt aaaagcacat tggctcaaaa atacaaagtt
    18541 caaaatgaaa atatcattat cggtgcaggc agtgatcaag tgattgaatt tgctatacat
    18601 tctaagttaa attctaaaaa tgcttttttg caagctggag ttacttttgc tatgtatgaa
    18661 atttatgcca aacaatgtgg tgcaaagtgt tataaaactc aaagtattac tcataattta
    18721 gatgagttta aaaaacttta tgaaacgcac aaagatgaaa ttaaacttat ttttttatgc
    18781 ttaccaaaca atcctttagg cgagtgtttg gatgcaagtg aggcgaccga gtttattaaa
    18841 ggtgtaaatg aggattgttt agttgtgatt gatgcagctt ataatgaatt tgcaagtttt
    18901 aaagatagca aaaaacattt agaaccttgt gaattgatta aagaatttga caatgtactt
    18961 tatttgggaa ctttttctaa actttatgga ttaggaggct tacgcattgg ttatggtata
    19021 gctaatgcta atattattaa tgcattttat aagcttcgtg ctccttttaa tgtgagcaat
    19081 cttgctttaa aagcagcagt tgcagcaata gatgatgatg aatttactga aaaaacttta
    19141 gagaataatt tttctcaaat ggagctttat aaagaatttg ctaaaaaaca taatatcaaa
    19201 attatcgata gttatacaaa tttcatcact tatttttttg atgaaaaaaa tagtacagat
    19261 ttgtctgaaa aattgcttaa aaagggtata ataataagaa atttaaaaag ctatggttta
    19321 aatgctatac gcattactat aggaacatct tatgaaaatg aaaaattttt tacagaattt
    19381 gataagattt taagatagat aaatcaaata aaaatatgta aaattcgcta aactaaggga
    19441 tgagaattaa tggattttaa aaatatgctt catcaaattg ggcaacttta tcaaaattta
    19501 actcgcaagc agcgtatagt gattgctgca tctattgtag tagtggttgg gtttttggtt
    19561 tttttagctt tatttcgtgg aagtggtagt aatgcaaata atggatatgc agttttagtt
    19621 gaaaatgtaa gcccaagttc ttctgctgca attgtagcta aacttgaaca aaataatatt
    19681 ccctataaat tagaaagtga aaataaaatt ttagttccac aagatcaggt ttatcgtcaa
    19741 agaatgttta ttgcaagcga aggtcttata aaagatagtc gcgtgggttt tgaagctttt
    19801 gatactcaag cttttggagc tacaaatgaa gagcaaaagg taaaatacca aagagccata
    19861 gaaggcgaac ttgcaagaac tattgagact ttagaaccta ttcgtagtgc tgttgtacac
    19921 atagcatttc ctaaagatag tgtttttacc gaaaggcaaa ttccgcctac agcttcagtt
    19981 gttgttaatg ttcgcgaagg cttaaagctt actagaaaac aaattgatgg tataaaaaat
    20041 attgtttcgg cggcagttcc aaaacttact aaagaaaatg ttaagattag tgatcaaagt
    20101 ggtgtgcctt tagatgagca agaagcatat gaagatgact tggttcgtgc gcaaattaaa
    20161 tttaaaagtg atcaagaaaa agctttagaa gataagatta tagaaaattt agctcctttt
    20221 gcaggtggca tggataaagt aaaagtgagt gtaaatatag attttgattt ttccaagcaa
    20281 gaatctcaaa gtgaaattta tgatccaaat cctatagtac gtagtgagca aactttaaac
    20341 gaggaaagaa caggtagaaa agatccagaa attcagggtg ttccaggtgc tgtttctaat
    20401 ataggtcctg ttgaaggact tgacaataag ggtcaaattg acacttataa aaaaaatcaa
    20461 gttactacaa ataatgaact ttctaaaact atcacaaata ccaaaaaaca atttgcaaca
    20521 gttttacgca cttcagcagc tgttactata gatggaaaat atcaagatgt ggttgatgaa
    20581 aatggggatg tgaaaagcga atatgtccca ttgactaaag aagagcttgc aagtgttgag
    20641 agtatagtta aaaatactat taattttagc gctactagag gtgatagtgt tgtggtgcaa
    20701 aatttaccat ttcatcgtga gtcgattaga gttgagagta aagttaaaac tttttacaat
    20761 cgttttgttg agccatttat tccgccggtt aaatacttta ttgcagcgat tttacttttt
    20821 attttttaca aaaaagttat tgctccattt actcaaaaaa tgcttgaaga tgtcgcagca
    20881 caagaggaaa tgcagcaagg tccaaatgct gttttagatg atgctgaaga tgctttagag
    20941 aaatttaatg cagcaaggaa aaaagttgaa gaacaacttg gttttgggga taacttcaat
    21001 gaagattcta tccagtatga ggttttgctt gaaaaattgc gtggtttggt aagtgataaa
    21061 ggtgaggaaa ttgcagcact tttgcaaaac ttaattcaaa atgatagcga atttggcgaa
    21121 aaggatatgt gatgataaag ctaagtgaag aacaaaaaat ggtctatgat gatttatcga
    21181 tgcctgagaa ggtagcgata tttcttatac aacttggcga agatgcaacc acttctgtgt
    21241 tttcacatat ggaaattgat gtaatcacag aaatttcacg ttatattgct atggctaaaa
    21301 atgttgatag atctgtagct actgcagttt tagaagaatt ttacactctg cttcaatcaa
    21361 atcaatatat taaaagtggt ggtttggaat atgctaaaga aatacttttt cgtacttttg
    21421 gaccagagat tgcaaataaa attcttgaaa aactcactaa aagtatggag aataatcaaa
    21481 attttgctta tttggcgcaa attaaaccac agcaacttgc agactttatt accaaagagc
    21541 acccacaaac catcgctctt attttggcac acatggattc tattcatgcg gcagaaactt
    21601 tagagtattt tagcgatgaa ttaagggctg aggtggttat aagaatggca aatcttggtg
    21661 atatttctcc aagtattatt aaaagagttt ctgcagtgct agaaagcaag cttgaaagtc
    21721 ttacctctta taaggttgaa gtgggcggcc caagagcagt agcagaagtg cttaatcgtt
    21781 tgggtcaaaa agcaagcaaa tcaaccatta cttatattga acaaagtgat gaacgcttag
    21841 cagagactat taaagagctt atgtttactt tcgatgatat acaaaaactt agcactcagg
    21901 ctataagaga aattttaaaa gtagccgata agcgtgattt aatgataggt ttaaaaggtg
    21961 caagtgaaga gttaaagcaa aaattcttag ccaatatgtc tacgcgtgca agcgaagctt
    22021 ttcttgaaga aatgggtttt ttgggtgctg tgcgtgttaa agatgttgaa gatgcacaaa
    22081 gaaaggttgt tgaagtggtg caaaaacttg cagaacaagg tcttgttcaa acaggcgatg
    22141 cggatgaaat gatagagtag gtgagagatg gttaatcgta gcaatgtaat ttctggtggg
    22201 gcttctgatc agcatgttgt tgaaggatat cgttttaaag ttatttcaga atttgataat
    22261 catacaggtg aaaaaaaaca tactcaaact ccagatgaag aaaatactaa tatatcttta
    22321 aatgacgaaa aaccagtcga agaaaatcaa gtcattgcct ctacacaagc tgttatggaa
    22381 actcaaattc caacatttca accaagcttt gttgaagatt tacttaaaaa aacagatgaa
    22441 atgtcaagca atattattaa acttcaaatg caaatagaaa gccaagagaa tgaatttaat
    22501 aaccgcttaa attcagaact tgaaaatgct aaagaaaaat ttaccaaaga gggttatgag
    22561 aaagcaaaag aagaatttca aaaggaattg agtgatttta aagataagta tttaaaaagt
    22621 atagccaaac ttgataatgc ttgcgaaaat cttgaaaatt tcatagaaaa aaatgagaaa
    22681 gaattagcag atactgctat agatatcgct aaagaagtaa tcttaaaaga acttgaacta
    22741 aattcaagta agatagctta tgctttggct aaagatttaa tcggtgagct taagggtgct
    22801 agtgcaattg agcttaaggt taatgcagag gattatgagt atttaaaaga gcaatttgat
    22861 cagaatgctc atattaaaat aagtcttgat gatgcaatta gcaaaggaag tgttgttatt
    22921 ataagtgacg caggcaatat agaatccaat cttaactctc gtctaactaa aattaaaaaa
    22981 atggtgaata atgagtaaaa aatttgccca tactcaagaa gagttagaaa agctaagttt
    23041 aaaagaatta gaaaatttag cagcatctat gcgtgaaaaa atcatacaag ttgtgagtaa
    23101 aaatggtggg catttaagtt caaatttggg tgctgtagaa cttagtatag caatgcattt
    23161 ggtttttgat gcaaaaaaag atccttttat ttttgatgtg tcgcatcagt cttatacaca
    23221 caagctttta agcggaaaag aagaaatatt tgatacttta agacaaatca atggtttaag
    23281 tggttataca aaacctagcg agggagatta ttttgtagca gggcattcta gtacctctat
    23341 ttctttggca gtaggtgctt gtaaggctat tgctttaaag ggtgaaaagc gtattcctgt
    23401 tgctttgatt ggagatggtg ctttaagtgc gggtatggcc tatgaggctt taaatgaatt
    23461 gggtgattct aaatttcctt gcgtaatact tttaaatgat aatgaaatga gtatttcaaa
    23521 accaattgga gcaatttcaa agtatctttc tcaggctatg gcaacgcagt tttatcaaag
    23581 ttttaaaaag cgtattgcta aaatgttgga tatattgcct gatagtgcta cttatatggc
    23641 caagcgtttt gaagagagtt ttaaacttat tactcctgga cttttgtttg aagaattagg
    23701 gcttgaatat atagggccta ttgatggaca taatttaggt gaaattattt ctgcattaaa
    23761 acaagcaaaa gctatgcaaa agccttgtgt gatacatact caaaccataa agggtaaagg
    23821 ctatgcttta gccgaaggaa aacatgctaa atggcacggg gtgggagctt ttgatataga
    23881 tagtggagag agtgttaaaa aaagtgatac taaaaaatct gttactgaaa ttttttctaa
    23941 gaatttgctt gatttagcct caaaatatga aaatattgtt ggggttacgg cggctatgcc
    24001 aagtggaaca ggtcttgata agcttataga aaaatatcca aatcgttttt gggatgtggc
    24061 tattgcagaa cagcatgcag taacttctat ggccgctatg gcaaaagaag gatttaaacc
    24121 ttttattgca atatatagca cttttttgca gcgtgcttat gatcaagtga tccatgattg
    24181 tgcgattatg aatttaaatg tggtttttgc tatggatagg gcagggatag taggcgaaga
    24241 tggggagacg catcaaggtg tttttgatct tagtttttta gctcctttgc caaatttcac
    24301 tcttttagcc ccaagagatg aacaaatgat gcaaaatata atggagtatg cttatttaca
    24361 tcaaggacct attgcttttc gttatcctag agggagtttt attttggata aagaatttaa
    24421 tccttgtgag ataaaacttg gtaaggcgca atggcttgta aaaaatagta gtgaaattgc
    24481 ttttttaggt tatggacaag gtgtggcaaa agcgtggcaa gtcttaagag ccttgcaaga
    24541 aatgaataat aatgctaatt tgattgattt aatttttgct aaacctttag atgaagagct
    24601 tttgtgtgag cttgctaaaa aaagtaaaat ttggtttatt tttagtgaaa atgttaaaat
    24661 tggcggtata gaaagtttaa ttaataattt tttacaaaaa tatgatttgc atgtaaaagt
    24721 tgttagcttt gaatatgaag acaaatttat tgaacatgga aaaacaagtg aggtggaaaa
    24781 aaatttagaa aaagatgtca atagtttgtt gacgaaagtt ttaaa
//
LOCUS       DAPIWB010000017        24478 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.018, whole genome shotgun sequence.
ACCESSION   DAPIWB010000017 DAPIWB010000000
VERSION     DAPIWB010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24478)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24478)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24478
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.018"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..398
                     /locus_tag="RJ266_000576"
     CDS             <1..398
                     /locus_tag="RJ266_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354353.1"
                     /translation="LGFRALNFIFDFFNFFMFCSLLAFVFNFVLKIKIKIIVLFLCFI
                     MVLGNYFLKEQRNNALKSEQEQILLWMNNFNFLKDNNLSLIQKEKDLFEKDLKDLREI
                     FKKNAFEIGIWWFSKEKEDLEKRINESLK"
     gene            395..1156
                     /locus_tag="RJ266_000577"
     CDS             395..1156
                     /locus_tag="RJ266_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HDV7354354.1"
                     /translation="MRFDFFVSKRLNISRNKALELIENEEILLNGKSFKASFDVKNFL
                     ENLKKTQDLNPEDILLANELKLDLLSEIYVSRAALKLKKFLEENDIEIKHKNCLDIGS
                     STGGFVQILLENQALKITALDVGSNQLHPSLRANEKIILHENTDLRAFKSEEKFELVT
                     CDVSFISLINLLYYVDNLALKEIILLFKPQFEVGKNIKRDKKGVLKDDKAILKARMDF
                     EKECAKLSWLLKNTQKSSIKGKEGNVEYFYYYIKN"
     gene            1122..1976
                     /locus_tag="RJ266_000578"
     CDS             1122..1976
                     /locus_tag="RJ266_000578"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HDV7354355.1"
                     /translation="MLNIFTTISKINITSLAIGCFDGMHLGHLKLVKYLDENGALLVI
                     NKFKGQFLCSNRQKEEISGKKVIEVDFESIKSLDGKDFLSFLKKEFTSLKFIVVGYDF
                     SFGKNRAYSAKDIEFLSGIKTIIVDEFSIGGIGVHASLIKDFLSRANLQKAKEFLGRN
                     YSIKGKVIKGQGLGSKELFATINLDCEGYFLPQNGVYATLLKSQRKTYKSVSFLGVRS
                     SDENFAIESHILEELGENFTQGEFFELEFISFLRENQKFQDLKKLKNQITKDIEQARE
                     LLRKNDER"
     gene            1963..2673
                     /gene="cmoA"
                     /locus_tag="RJ266_000579"
     CDS             1963..2673
                     /gene="cmoA"
                     /locus_tag="RJ266_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HDV7354356.1"
                     /translation="MMKDELFKQSPKKQFEFDKSVASVFDDMINRSVPFYRENLELCG
                     NLLAKILPTNASVCDLGCSSANFLIFLANLRKDFKLFGVDNSASMLEVAKSKAKAYGL
                     DISFFEANLCEFDFFTCDVFVANYTMQFIRPPKRQELLDQIYKNLNSKGILIMSEKIL
                     YEDAFLSKNIIELYADYKEKQGYSKFEIAAKREALENVLIPYSQKENLNMLEKAGFKK
                     IESIFKWANFETFIAFKD"
     gene            complement(2663..2884)
                     /locus_tag="RJ266_000580"
     CDS             complement(2663..2884)
                     /locus_tag="RJ266_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HDV7354357.1"
                     /translation="MTMKITLFLSLIGIFFAACEQTKSVEYYQNHPEEAKKRSLECRH
                     KAIISQDCVNAYKIGFPKDEWEDENISNP"
     gene            complement(2881..3315)
                     /locus_tag="RJ266_000581"
     CDS             complement(2881..3315)
                     /locus_tag="RJ266_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HDV7354358.1"
                     /translation="MRKLSILLAILIVINTTACDSKTENYYKNHPSEEKAKAKECKEN
                     GTLSKDCINALKVGVKPTNEEGKYSPNTPKKSDNQILEALKQNDLKKEKTTKDINQSS
                     ENNESIIIPPIAETPSEIYPSKTTENNQSSIFSDDVNMTQEK"
     gene            complement(3373..4005)
                     /locus_tag="RJ266_000582"
     CDS             complement(3373..4005)
                     /locus_tag="RJ266_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HDV7354359.1"
                     /translation="MEINALTITTLYIIGISAEGMTGALAAGRHRMDLFGVIFIALVT
                     AIGGGSIRDVLLGHYPLTWVKHPEYIILICFCALVATKIPRVVTKLETLFLTLDAIGL
                     VVFSILGAQIAIDQNHGFIIAIAAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAII
                     SGAIYYSLIIWLELNALVCTLLTLFIGVIARLLAIKYQWSLPIFSYNEEK"
     gene            complement(4016..4666)
                     /locus_tag="RJ266_000583"
     CDS             complement(4016..4666)
                     /locus_tag="RJ266_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HDV7354360.1"
                     /translation="MKIFIFLLTISLNIFALEPYKPSADFSSYFNNINCSQILDKFFY
                     LNCYDYKLKGTKAVAYKVEASNLKDRQIKKRPRFEDDTNIPKKYRTTWSDYKNSGYTR
                     GHTAPNASFSFSKAAQNSVFLMSNITPQNAQINNKIWNEIEQRERNLALEFQSIEVLN
                     LVLYDKEPQYIKNRIAIPSFYVKIIKTPKFKECYQAPNHEVNDENIKQYQINCDKF"
     gene            complement(4663..5289)
                     /gene="nth"
                     /locus_tag="RJ266_000584"
     CDS             complement(4663..5289)
                     /gene="nth"
                     /locus_tag="RJ266_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HDV7354361.1"
                     /translation="MKRNLEIKELFLKHFDKPVTELKFSNLYELLVCVMLSAQCTDKR
                     VNLITPDLFKAYPDIKSLANANLSSLKTYIQTCSFFNNKAQNLIKMAKAVCENFDGEI
                     PLDEQNLKSLAGVGQKTAHVVLIEWCGANFMAVDTHVFRVSHRLGLSKAKTPEATEED
                     LTRTFKDNLNYLHQAMVLFGRYTCKAKKPLCKECFLNHLCKSKDKELK"
     gene            5370..6191
                     /gene="peb4"
                     /locus_tag="RJ266_000585"
     CDS             5370..6191
                     /gene="peb4"
                     /locus_tag="RJ266_000585"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase PEB4"
                     /protein_id="HDV7354362.1"
                     /translation="MKKFSLVAATLIAGVVLNVNAATVATVNGKSISDTEVSEFFAPM
                     LRGQDFKTLPDNQKKALIQQYIMQDLILQDAKKQNLEKDPLYTKELDRAKDAILVNVY
                     QEKILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKGLKGK
                     ELDAKFSELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTTPVKTN
                     FGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEYK"
     gene            6191..7255
                     /gene="fbaA"
                     /locus_tag="RJ266_000586"
     CDS             6191..7255
                     /gene="fbaA"
                     /locus_tag="RJ266_000586"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HDV7354363.1"
                     /translation="MGVLDIVKAGVISGDELNKIYDYAKAEGFAIPAVNVVGTDSINA
                     VLEAAKKVNSPVIIQFSNGGAKFYAGKNCPNGEVLGAISGAKHVHLLAKAYGVPVILH
                     TDHAARKLLPWIDGLIEANAQYKKTHGQALFSSHMLDLSEESLEENLSTCEVYLQKLD
                     ALGVALEIELGCTGGEEDGVDNTGIDNSKLYTQPEDVALAYERLGKISDKFSIAASFG
                     NVHGVYKPGNVSLQPEILKNSQKFVKDKFALNSDKPINFVFHGGSGSELKDIKNAVSY
                     GVIKMNIDTDTQWAFWDGVREYELKNRAYLQGQIGNPEGDDKPNKKYYDPRVWLRSGE
                     ESMIKRLEIAFEDLNCINKN"
     gene            7350..8792
                     /locus_tag="RJ266_000587"
     CDS             7350..8792
                     /locus_tag="RJ266_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HDV7354364.1"
                     /translation="MDIKSDEISELVLPEGKDARGSLVYFKIIFIPAFLYILILLGYF
                     NVIDFKVELHTVIMTGVIFFTALIFARHSAEYAYSIFEQQKDEFKQALKRHIMRHFLA
                     IGKDTKSNANFDDFAYTYIKGARNENFASIGSAIFPMMGILGTFISIAFSMPNFSSSD
                     TAALEQEIADLLSGVGTAFYVSIYGIFLALWWMFFEKYGKSKIDRLLNRQKNATSGFF
                     WTKEELDQRYLTESLQHFEKIGAIFKQVSNDDFFAELDHAIDRKFGIFQDMLNVEEKA
                     IRLSSEHIKQTMGELSKAQRDQRDLGKLYSEMLNGIGLLNQNLKEINTRMSEQYNRLL
                     DISSDKIHHLDKTLSAFDEKIERFGKNFELYEKAMLESQEKVFEGFKASLFEGMHKFK
                     EVYEEEKSIDAKIKMMDELKKEMKALDEETSQMMSKLSGDENQNKENETKQIEDFSES
                     KTEENQDEIQAEISKQESNDELKNEDKENK"
     gene            8789..9742
                     /locus_tag="RJ266_000588"
     CDS             8789..9742
                     /locus_tag="RJ266_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDV7354365.1"
                     /translation="MKNESKEDSNFWIAYADLMAGLLFVFILLIGAIVVKYVLTQSDL
                     KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITN
                     YKQLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLS
                     KELQSKLDNNITIDEKTGSISLPAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDP
                     KIFSNIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS
                     FSDPVFVNGVEDKDKSRRIEIKFSIKNDNALKDVEKFFEFH"
     gene            9729..10604
                     /locus_tag="RJ266_000589"
     CDS             9729..10604
                     /locus_tag="RJ266_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-aminocyclopropane-1-carboxylate
                     deaminase/D-cysteine desulfhydrase"
                     /protein_id="HDV7354366.1"
                     /translation="MNFIKTISPIQKINFNGFEFYIKRDDLLGEINGNKARKLAFYIH
                     QRYPKNQSFVSYGGSQSNALAALSIFAKQRSYKLVFACEKISTFLKNNPCGNYTLALE
                     NGVDFVENIHSLSLKQFALSLCKKDDVFIEQGIANLEAQYGYMELAQEIQMQSQSLKL
                     DFDIFLPSGTGTSAAFLAKYSKFKVFTCACVGDIKYLKKQILTLDPSYDFSNLEFLTS
                     DKKYHFAKPYKEFYELYMDLKLKCNIEFDLLYDILGLSIALKQEWKKPLLYIHQGGIL
                     GNSTMLERYKFKKSV"
     gene            complement(10596..11939)
                     /locus_tag="RJ266_000590"
     CDS             complement(10596..11939)
                     /locus_tag="RJ266_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDV7354367.1"
                     /translation="MQRQTWSSTLTYILTVAGATIGFGATWRFPYLVGENGGGAYVLV
                     FCIAMIIIGIPVILVENVIGRKAMTNSVDAFKQKWQSIGYMGLLGSFGIMAYYMVLGG
                     WVLVYIWELTLGNFSLANVVSKEFTHQFFNDKIAFNPLGVGIFTTVFVIINYIILKRG
                     IIDGIEKSVKFLMPLLFICLIIVVGRNLTLDGAMAGVKFYLEPDFSKILSPKLLIDVL
                     GQVFFALSLGFGVMITLSSHLNKNENMAKTAIYTGVLNTIIAVLAGFMIFPALFSAGL
                     APDSGPSLVFETLPIAFSHIHFGTIVCILFFVLLLIAALTTSLPIYQVIISVLEEKFK
                     YSKNLSINLTLGFIFILGNLPCILTYGPWRDIVIIKGKNIFDSFDFISGNILFVLTAF
                     FCCIYVGWILGKQESLKELSNNNTLKSSWFGIWFYYVKYIVPLIILIIFIYGILN"
     gene            complement(11990..12658)
                     /locus_tag="RJ266_000591"
     CDS             complement(11990..12658)
                     /locus_tag="RJ266_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HDV7354368.1"
                     /translation="MKIQSLQIGKIKNYKNFQSAFIKDTYLEETQIDFLGVLDDQIAD
                     KIHHGGYHKAIFANSCQNYPIWERFLNKKLNFGSMGENLSIDGLCEQNVCIGDVHQIS
                     NAILQVSEPRKPCVKISRIHNNSNFTHEIFKTGLSGWYYKVLQVGQIRKHENIKILEK
                     NSTSLSVFELNQLFYSPHQILKQNPNLLDKLEKLNSLISQNWHETIHKRLKNTYDISY
                     MDSL"
     gene            complement(12655..14358)
                     /locus_tag="RJ266_000592"
     CDS             complement(12655..14358)
                     /locus_tag="RJ266_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HDV7354369.1"
                     /translation="MRIFGIILLSFCLCFASILSLNEAFNVKSNSYNNSISIDIELGK
                     DIYLYSNKLKLYINEKDISSLINLPQSSTRGNENVYYQKLNLALPNLLLERFAKNTTN
                     LIKLEFQGCSEQGLCYNPQTWYFDLISKKDAFEISKPYKAQKTDKKTKIESEESSIAN
                     FLATDNFFWILLSFFGYGLLLSLTPCILPMIPILSSLIVAKSNAKFSKKYSFFLSFIY
                     VFFMSLAYAIAGVIASFLGASIQGILQKPIILILFALIFIAFAFAMFGAFRFELPLRF
                     QTFIHKKSEKGKGVLGIAIMGFLSALIVGPCVAAPLAGALIYIANTGNALLGGSALFI
                     MSFGMGIPLLFIGLGLGFIKPGFWMEKVKIFFGFVMLAMAIWILSRIIEENYILIAYG
                     ILGVFFSVFMGIFEKSFTIISKIKKSILILILAYSLSIFLGGLFGAKNFLNPLNFNTI
                     SASKHALSYDYINNFEQLKQEIQTNTKPIMLDFTASWCENCKLLDELTFSDERIIQKM
                     QNYKLIKVDVSENNNEQIKTMKEFNVFGPPVLIFFENGKEKLKITGFISADDLLKKIE
                     P"
     gene            14453..15334
                     /gene="ppk2"
                     /locus_tag="RJ266_000593"
     CDS             14453..15334
                     /gene="ppk2"
                     /locus_tag="RJ266_000593"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HDV7354370.1"
                     /translation="MQENNSPKAQATVKKNEIYVSVKRKKSTIEYEKDLKNLQIELLK
                     FQNHVKAKGLKVLILIEGRDAAGKGGAIKRLIEHLNPRGCRVVALEKPSDVEKTQWYF
                     QRYIAHLPSAGEIVIFDRSWYNRAGVEPVMGFCTPQQHKDFLREVPLFENMISNSDII
                     FFKFYFSVSKDEQKKRFEKRRSDPLKQYKLSPVDQKSQELWDKYTLAKYSMLLASNTP
                     TCPWTIISSDDKKKARLNLLRFILSKVEYPNKKTGDFSKIDAKLVRSGEEEIRKMEAN
                     LEKLDSKKADEKIKDLD"
     gene            15343..16533
                     /locus_tag="RJ266_000594"
     CDS             15343..16533
                     /locus_tag="RJ266_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDV7354371.1"
                     /translation="MQKLVENLALKYYDKVVDLRHQIHMHPELEFEEENTAHLVCKIL
                     DEFGIKYQKNIAKTGILAIIEGKKKSQKKPKCVLLRADMDALPVQEKTNLSYASKIDG
                     KMHACGHDGHTAGLLGAALILNELKDEFCGTIKFMFQPAEEGSGGAKPMIESGVLENP
                     YVDAVFGCHLWGPLLENTAQIVSGEMMAGTDIFDLEFIGRGGHGAHPHTCIDPIIMAT
                     QFVNNIQSVVSRRLAPYEAGVITVGQICAGTTYNVIPANAYLKGTVRFLNDKTQDILK
                     SSLEEVAAATAKSNGGDYKLKYTKEFPPLINDENAALIARKAFAKVLGEENIIVSSKP
                     DMGAEDFAFLTRERMGAYVFVGISKDLNHPALHHSSTFCWDDENLKVLMQGDVMMALE
                     FLNL"
     gene            16612..17754
                     /locus_tag="RJ266_000595"
     CDS             16612..17754
                     /locus_tag="RJ266_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDV7354372.1"
                     /translation="MKKKVILIILIAILGSVGAYFIFFNNDEKISYLTQKIQKKDISQ
                     TIEAVGKVYAKDQVDVGAQVSGQIIKLYVDVGTHVKQGDLIAQIDKDKQQNDLDITKA
                     QLESAKANLESKKVALEIANKQYQREQKLYAAKASSLENLETQKNNYYTLKANVAELN
                     AQVVQLEITLKNAQKDLDYTTITAPMDGVVINVAVDEGQTVNANQNTPTIVRIANLDE
                     MEVRMEIAEADVSKIKVGTELDFSLLNDPQKTYHAKIASIDPADTEVSDSSTSSSSSN
                     AIYYYAKFYVANKDDFLRIGMSIQNEIVVASAKAVLAVPTYAIKSDPKGYYVEILENQ
                     KAVKKYVKLGIKDSINTQILEGVNENEELIVSSSADGLATKMKLRF"
     gene            17754..19679
                     /locus_tag="RJ266_000596"
     CDS             17754..19679
                     /locus_tag="RJ266_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7354373.1"
                     /translation="MIFLKNICKNIGENAILKNVSLSIEKGEFVAIIGQSGSGKTSLL
                     NIIGTLDTPSSGTYVFDEYEVTKLNNDEKARLRREKIGFIFQRYNLLSLLSAKENVSL
                     PAVYAGKNLQERSQNAKKLLNDLELAHKLDSKPNELSGGQQQRVSIARALINGGELIL
                     ADEPTGALDSKSGIMVLEILQKLNEQGHTIVLVTHDPKIAAQAKRVIEIKDGEILSDT
                     KKEKAQEKLILKTMPKEKKTLTLLKNQAFECFKIAYSSILAHKLRSILTMLGIIIGIA
                     SVVCVVALGLGSQAKVLESIARLGTNTIEIRPGKGFGDLRSGKTRLNFSDLETLRSLE
                     YLEAVDAHSNTSGVATYTNISLSARAEGVGVNNFAIEGLRIDAGRILNNDDVKNSTNV
                     AVLDFNAKKNLFPDEKSENILGRVVLFNSQPFKIIGVLQKDTDKPIEDNVVRLYIPYT
                     TLMNKLTGDRNLREIIVKVKDDVSSTLAENAIIRILEIKRGQKDFFTFNSDTFKQAIT
                     ANKRTTTILTACVAVIALIVGGIGVMNIMLVSVSERTREIGIRMAIGARREDIMMQFL
                     IEAVMICTIGAILGVILSIFVIFAFNTLSTDFPMILNAYSVLLGLLSSMFIGVVFGFF
                     PARNAANLNPISALSKE"
     gene            19681..21051
                     /locus_tag="RJ266_000597"
     CDS             19681..21051
                     /locus_tag="RJ266_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDV7354374.1"
                     /translation="MKIILSIFLAFFLSACGVKLSLPKEVDLTQEQMKDLNLTYDWYR
                     SYDNAKLNEFLNFVLLNNSDINIARKTLHSALARADLIDYDLYPTLSGNLGFGGDKDL
                     NSGKQSKNFNNSLNLSYELDIYGKLRDSASASEFSAKASAYDLENLKISMINTALNDV
                     FELAYFNDVDKLLRAYLSNLEQMKELYNYKYKLGKIEELDLLNIEQSLLRAKQNLLSN
                     DQNRNLLIKNLQDLLAKQEGFAYIEYFKTLSLNDFKTLSPDFNIPLKALAYRADVRSK
                     LNSLKSAFKDYSSMQKSILPSISLGGALSGSDKKIDDSFKFEILSGNVKISLPFLDYG
                     RVKQNIKISQFAYEQLLISYEQALQSAMNEFALNYKDYQSDTLLLQNLQNINIKQELI
                     TKAYYEKYILGKSELKDYLDANNTLNSTQQEFLRARFNLLKTINSYYQITALSFNDEN
                     LEFPKY"
     gene            complement(21054..22232)
                     /locus_tag="RJ266_000598"
     CDS             complement(21054..22232)
                     /locus_tag="RJ266_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HDV7354375.1"
                     /translation="MLVNKFKIILLFFIIFTSSYAQNLNTNDTIDSILNQNKNHSALT
                     SYVLKKDLKNLEKKLEKNQNIGIRIYGDSHMAADFFPRVIRGYLIRSNSIGFAYPLQP
                     KYQQNLNLVYSYKNFEILNSRNPANAGHNFPLGGIIAKAKTKGAKINLDTTLDKKNFK
                     IGFLFKAKQNTNAFSIKDAKNQSYELRTTQINKWSYKELELDLPLQISALQKDAELGG
                     YFIANKDNNVFLDTIAINGAKSDLWLSWNQTVVKKELGLLHNDLIILAYGSNDALFKG
                     FEKQKFKNNLKKWISILKTYNKNAVIMLISPPTVVQKQGKNYKLAPDFFTIRKALYEV
                     AKEEKTLIFDMHQFMQDSGGKNKWIEQKLSLNDVHLTIKGYELMAKKLLEDLKNIIDY
                     "
     gene            complement(22219..23229)
                     /locus_tag="RJ266_000599"
     CDS             complement(22219..23229)
                     /locus_tag="RJ266_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF459 domain-containing protein"
                     /protein_id="HDV7354376.1"
                     /translation="MSVVRFFFILIIVLGLVVVVMNQSISSYIEQKYHFAFYPHNDLL
                     KEANGFKIKLEQIRAILSNEPLPQTNEETTNQENKSIDENLSKIDKVLNTLENDENTS
                     HKETNLTLIQDANISFIDNTKLELQNGDEFLFIGDSLMQGVAIALNRDLRNLNLKVTD
                     LSKQNTGLSYKSYFDWSKATNEAFIKNSNIKYLVVLLGANDPWDIKKGGNYHRFGSPS
                     WIDIYTSRVDEIIKIAKKHKAKVFWFEIPPVKKEDLNKKIQVLNKIYSDEILKNKEIF
                     INTKLFFSVNDQYSAYIKDENNRSIKVRTDDGVHFTPSGAREMSKLLLEHIKLKEENA
                     SK"
     gene            complement(23230..>24478)
                     /locus_tag="RJ266_000600"
     CDS             complement(23230..>24478)
                     /locus_tag="RJ266_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HDV7354377.1"
                     /translation="INPYFALVLFIYTFFIHYFALLIFVRRKRYIFATCMAFIILNLC
                     FFKYFPSIKGSVDEILNFFGLEFLNIDLVLPIGISFYTFTSITYLVEVYQKRRLESFL
                     NLATFLSFFPTLLSGPIMRSSFFFEQAYQKREFKHANLIIILLVFGIVKKVLIANYLG
                     IYAKSILDFPQSYNFIQLLSAIYAYAIQIYCDFSGYVDLVCAFALMLGFTLPPNFNMP
                     YLAKNLKDFWARWHISLSTFIRDYIYIPLGGNRKGMPRTIVNILIAFILSGMWHGNTL
                     AFIVWGLLHGIGIVFIHLLALSKFSLQKIPALGRFLTFQFVCFTWIFFYYSKNLEDAI
                     EYFKACYYNFFQIPSYNDIYMLVAFGVLFMIYPLFINFKEYCIKILNLTPFLLKPFII
                     AFILLLVFAFMPDGIPDFIYSSF"
BASE COUNT         8890 a         3118 c         4132 g         8338 t
ORIGIN      
        1 atttggggtt tagggcttta aattttattt ttgatttttt taattttttt atgttttgtt
       61 ctcttttggc ttttgttttt aattttgttt tgaaaataaa gataaaaata attgttttat
      121 ttttatgttt tatcatggtt ttaggaaatt attttttaaa agagcaaaga aataatgcct
      181 taaaatccga acaagagcaa atacttttat ggatgaataa ttttaatttt ttaaaagata
      241 ataacttaag tttaattcaa aaagaaaaag atctttttga aaaagatctt aaagatctta
      301 gagaaatttt taaaaaaaat gcttttgaaa taggtatttg gtggttttct aaagaaaaag
      361 aagacttaga aaaaagaata aatgagagtt taaaatgaga tttgattttt ttgtttcaaa
      421 gcgtttaaat atcagtagaa ataaagcctt agagcttata gaaaatgaag agattttact
      481 taatggtaaa agttttaaag cttcttttga tgtgaaaaat tttttagaaa atttaaaaaa
      541 aacgcaagat ttaaatcctg aagatatact tttagccaat gagttaaaat tggatctttt
      601 aagtgaaatt tatgtttcaa gagcagcttt gaaattaaaa aaatttttag aagaaaatga
      661 tattgaaata aaacataaaa attgtcttga tataggatct agtacgggcg gttttgttca
      721 aattttactt gaaaatcagg ctttaaaaat cactgctctt gatgtgggta gtaatcaact
      781 ccatccaagt ttaagagcaa atgaaaaaat tatcttgcat gaaaatacag atcttagagc
      841 ctttaaaagt gaagaaaaat ttgaacttgt tacttgtgat gtgagtttta tttctcttat
      901 taatttactt tattatgtcg ataatttagc tttaaaggaa attattttac tttttaaacc
      961 tcagtttgaa gtgggaaaaa atatcaaaag agataaaaaa ggtgttttaa aagatgacaa
     1021 ggcaatctta aaagcaagaa tggattttga aaaagaatgt gctaagttaa gttggctttt
     1081 aaaaaatacg caaaaatcaa gcattaaagg aaaggaaggt aatgttgaat atttttacta
     1141 ctatatcaaa aattaatatt acttctttag ccataggttg ttttgatggt atgcatttag
     1201 gacatctaaa acttgtaaaa tatttagatg agaatggggc tttgctagtt attaataaat
     1261 ttaaaggtca atttctttgt tcaaatcgtc aaaaagaaga aatttcagga aaaaaagtta
     1321 tagaagtgga ttttgaaagt ataaaatctt tagatggtaa agatttttta agctttttga
     1381 aaaaagaatt taccagttta aaatttatag tcgtgggtta tgatttttct tttgggaaaa
     1441 atagggctta tagtgctaaa gatattgagt ttttaagtgg gataaaaact ataatagttg
     1501 atgaatttag cataggtgga ataggtgttc atgcaagttt aattaaggat tttttatcaa
     1561 gagcaaattt gcaaaaagca aaagaatttt tagggagaaa ttatagcatc aaaggaaagg
     1621 taattaaagg acaaggctta ggttctaaag aactttttgc aactataaat ttagattgcg
     1681 aaggttattt tttgcctcaa aatggtgttt acgctacttt gttaaaaagt caaagaaaaa
     1741 cttataaaag tgtgagtttt ttaggtgtaa gatcaagcga tgaaaatttt gctatagaaa
     1801 gtcatatttt agaagaattg ggtgaaaatt tcacgcaagg agagtttttt gaactcgagt
     1861 ttatatcttt tctaagagag aatcaaaaat ttcaagatct aaaaaaactt aaaaatcaaa
     1921 ttactaaaga tatagaacag gctagagaat tattaaggaa aaatgatgaa agatgaactt
     1981 tttaaacaaa gccctaaaaa acaatttgaa tttgataaaa gcgtggctag tgtttttgat
     2041 gatatgatca atcgttctgt accattttat agagaaaatt tagaactttg tggcaattta
     2101 ttggctaaaa ttttacctac aaatgcaagt gtttgcgatt tgggctgctc aagtgctaat
     2161 tttttgattt ttttggcaaa tctaagaaag gattttaaac tttttggcgt ggataattct
     2221 gcttccatgc ttgaagttgc aaaatcaaaa gctaaagctt atgggcttga tataagtttt
     2281 tttgaagcta atttatgcga atttgatttt tttacttgcg atgtttttgt agcaaattat
     2341 accatgcagt ttattcgtcc tcctaaaaga caagaattgc ttgatcaaat ttataaaaat
     2401 ttaaactcta aaggcatttt gattatgagt gaaaaaatcc tttatgaaga tgcttttttg
     2461 tctaaaaata tcatagaact ttatgctgat tataaagaaa aacaaggcta ttctaagttt
     2521 gaaatcgcag ctaaaagaga agctttggaa aatgttttaa ttccttatag tcaaaaagaa
     2581 aatttaaata tgctagaaaa ggcaggtttt aagaaaatag aaagtatttt taaatgggca
     2641 aattttgaaa ctttcatagc ttttaaggat tagaaatatt ttcatcttcc cattcatctt
     2701 ttggaaaacc tatcttatat gcattaacac aatcttgact aatgatagct ttgtgtctgc
     2761 attctaaact tctttttttt gcttcctcgg ggtgattttg ataatattct acacttttgg
     2821 tttgttcgca tgctgcaaaa aatataccaa taaggcttaa aaaaagagtt attttcatgg
     2881 tcatttttcc tgtgtcatat taacatcatc gctaaagata gaactttgat tgttttctgt
     2941 tgttttggaa ggataaattt cagaaggtgt ttctgctata ggtggtatta taatactttc
     3001 attattttct gaactttggt taatatcttt tgtggttttt tcttttttta aatcattttg
     3061 ttttaaagct tctaatattt gattatcaga ttttttcggt gtgtttggac tgtatttacc
     3121 ctcttcattt gttggtttaa caccaacttt taatgcattg atacaatctt tactaagagt
     3181 tccgttttct ttgcattctt ttgcttttgc tttttcttcg ctgggatgat ttttgtagta
     3241 attttccgtt ttgctatcgc aagctgttgt attaataact attaaaattg caagtaaaat
     3301 acttagtttt cgcatttata aatttcctaa aatttttaat atcttagcaa acttgtataa
     3361 agcaatgata aattattttt cttcattgta agaaaaaata ggtaaagacc attgatattt
     3421 gatagctaaa agccttgcaa taacccctat aaaaagagtt aaaagtgtgc aaactagggc
     3481 attaagctca agccaaatta ttagagaata atagattgct cctgaaatta tggcaattcc
     3541 tgcataaatt tctttttgaa acaccaaggg gattctcata cataaaatat ctcttaaaat
     3601 tccaccaaaa acaccagtaa ttacagctgc ggcaatggct atgataaacc catggttttg
     3661 atctatggct atttgagctc caagtatgct aaaaacaaca agtcctatag catcaagagt
     3721 tagaaataaa gtttcaagtt tggttactac gcgtggaatt tttgtggcta caagggcgca
     3781 aaaacagatt aaaataatat attcaggatg tttaacccaa gttaaaggat aatgtcctaa
     3841 aagcacatct cgtatgcttc cgcctccaat tgcagttacg agcgcaataa aaataactcc
     3901 aaaaagatcc attctatggc gtcccgcagc taaagctccc gtcattcctt ctgcggaaat
     3961 acctatgata taaagagtgg ttatcgtaag agcatttatc tccataattt ataccttaaa
     4021 atttatcaca atttatttga tactgtttaa tattttcatc atttacttcg tggtttggtg
     4081 cttgatagca ttctttaaat ttcggagttt taataatttt cacataaaaa cttggtatag
     4141 caatacggtt tttaatgtat tgtggttctt tatcgtaaag tactaaattt aaaacttcga
     4201 tactttgaaa ttctaaagct aaatttcttt ctctttgttc gatttcattc caaattttat
     4261 tatttatttg tgcattttgt ggggtaatat tactcattaa aaatactgaa ttttgagcag
     4321 ctttactaaa gctaaaagaa gcattgggtg cagtgtgtcc tcgtgtgtaa ccactgtttt
     4381 tataatcact ccaagtagtg cggtattttt taggaatatt tgtatcatct tcaaagcgag
     4441 ggcgtttttt gatttgtcta tctttcaaat ttgaagcttc taccttataa gcaacagctt
     4501 ttgtgccttt gagtttataa tcatagcaat ttagataaaa aaacttatct aagatttgcg
     4561 agcaatttat attgttaaaa taagaagaaa aatcagcact aggcttgtaa ggttctaagg
     4621 caaaaatatt aagagatata gtgagtaaaa agatgaaaat tttcatttaa gttccttatc
     4681 tttacttttg caaagatgat ttaaaaaaca ttctttacat aaaggttttt tagctttaca
     4741 ggtgtaacgt ccaaaaagaa ccatggcttg atgaagatag ttaagattat ctttaaatgt
     4801 gcgtgttaaa tcttcttctg tagcttctgg agtttttgct ttgctaagtc ctaagcggtg
     4861 agaaactcta aaaacatgag tatctacagc catgaaattt gctccgcacc attctattaa
     4921 aactacatga gcggtttttt gtcctacgcc tgctaaggat tttaaatttt gttcatcaag
     4981 gggaatttct ccgtcaaaat tttcacaaac tgcttttgcc atttttataa gattttgtgc
     5041 tttattatta aaaaatgaac aagtttgtat ataggtttta agacttgata aatttgcatt
     5101 tgcaagggat ttgatatcag gataagcttt aaaaagatca ggagtgatga gattaactct
     5161 tttatcagtg cattgggctg aaagcattac gcagactaaa agctcatata aatttgaaaa
     5221 tttaagctct gttacaggct tgtcaaaatg ttttaaaaaa agttctttga tttctaaatt
     5281 tcttttcatt ttttaatttt agttaattag ctttaaacca agtttagata taattgattt
     5341 tatatacatt ttattaaaaa ggaaacctaa tgaaaaaatt ttctttagtc gcagcaactt
     5401 tgattgcagg tgtagtttta aatgtaaatg cagctacagt agctactgtt aatggcaaga
     5461 gcattagcga tacagaagta agtgaatttt ttgcccctat gcttagagga caggatttta
     5521 aaactttgcc agataatcaa aaaaaagctc ttattcagca atatattatg caagatttaa
     5581 ttttgcaaga tgctaaaaaa caaaatttag aaaaagaccc tttatacaca aaagaacttg
     5641 atcgtgcaaa agatgcaata cttgttaatg tttatcaaga gaaaatttta aatactatta
     5701 aaattgatgc ggctaaagtt aaagcttttt atgatcaaaa taaagacaaa tatgtaaaac
     5761 ctgcaagagt gcaagcaaaa catatcttag tagcgacaga aaaagaagct aaggatatta
     5821 ttaacgaact taaaggttta aaaggtaaag aactagatgc taaatttagc gagcttgcta
     5881 aagagaaatc aattgatcca ggttcaaaaa accaaggtgg tgagcttggt tggtttgatc
     5941 aatcaactat ggtaaagcct tttacagatg ctgctttcgc gcttaaaaat ggtactatta
     6001 ctacaactcc ggtaaaaacg aattttggtt atcatgtaat cttaaaagaa aattcgcaag
     6061 ctaaaggtca aatcaaattt gatgaagtaa aacaaggtat tgaaaacgga cttaaatttg
     6121 aagaatttaa aaaagttatc aatcaaaaag gccaagatct tttaaatagt gctaaagtgg
     6181 aatataaata atgggtgttt tagacattgt aaaagcaggg gtgattagcg gagatgagct
     6241 taataaaatt tatgactatg ctaaagcaga gggttttgct atccctgctg ttaatgttgt
     6301 aggaactgat tctattaatg cagttttaga agctgcaaaa aaagttaact ctccagttat
     6361 tatccagttt tcaaatggtg gggcaaaatt ttatgcaggg aaaaattgtc ctaatggaga
     6421 agttttaggt gcaattagtg gggctaaaca tgtacattta cttgctaaag cttatggtgt
     6481 acctgtgatt ttacacactg atcatgctgc aagaaaactt ttgccttgga ttgatgggct
     6541 tattgaggca aatgcacaat ataaaaaaac ccatggacaa gctttattta gttctcatat
     6601 gcttgatctt agcgaagaaa gtttagaaga aaatcttagc acttgtgaag tttatcttca
     6661 aaaacttgat gctttaggtg tcgcgcttga aatagaatta ggttgtacag gtggcgaaga
     6721 agatggagtg gataatacag gtattgataa ttccaagctt tatacccaac cagaagatgt
     6781 agctcttgca tatgaaagac ttggaaaaat tagtgataaa ttttcaatcg cagcaagctt
     6841 tggaaatgta catggagttt acaagccagg aaatgttagc ttacaacctg aaattttaaa
     6901 aaattcgcaa aaatttgtaa aagataaatt tgctttaaat agcgataagc ctataaattt
     6961 tgtatttcat ggcggtagcg gtagtgagct aaaagatatt aaaaatgcag taagctatgg
     7021 cgtaattaag atgaatattg acacagatac tcaatgggct ttttgggatg gggtgcgtga
     7081 atatgaactt aaaaataggg cttatttgca aggacaaatt ggaaatccag aaggtgatga
     7141 caagccaaat aaaaaatact atgatccgcg tgtttggtta agaagcggtg aagaaagcat
     7201 gataaaacgt cttgaaatcg cttttgaaga tttaaactgt ataaacaaaa actaagcatt
     7261 ttaaaggctt agttttattt tgttttaaaa atttttatca aattaagtag caatctttaa
     7321 aataaaattt ttaatgaggt attggtttca tggatattaa atcagatgaa atttcagaac
     7381 ttgttttgcc tgaaggcaaa gatgcaagag gttctttggt ttattttaaa attattttta
     7441 ttccagcttt tctttatatt ttgattttat tgggttattt taatgtaatt gactttaagg
     7501 tcgaattaca tacggttatt atgacaggtg tgattttttt tacagcattg atttttgcta
     7561 gacatagtgc tgagtatgcg tatagtattt ttgaacaaca aaaagatgaa tttaaacagg
     7621 ctttaaaaag acatattatg aggcattttc ttgccatagg gaaagacacg aaatcaaatg
     7681 ccaattttga tgactttgct tatacatata ttaagggtgc aagaaatgag aattttgcta
     7741 gtataggttc ggcaattttt ccaatgatgg gaattttagg aacttttatc agtatagctt
     7801 tttcaatgcc aaattttagt tctagtgata cagccgcttt agaacaagaa attgcagatt
     7861 tgttaagtgg agtgggaact gctttttatg tttcaattta tggaattttt cttgcattat
     7921 ggtggatgtt ttttgaaaaa tatggtaaaa gcaaaataga tcgtttgcta aatcgtcaaa
     7981 aaaacgctac aagtggattt ttttggacaa aagaagagct tgatcaaaga tatttaactg
     8041 aaagtttgca acattttgaa aaaattggag caatttttaa acaagttagt aatgatgatt
     8101 tttttgcaga gcttgatcat gctattgata gaaaatttgg tattttccaa gatatgctaa
     8161 atgtagaaga aaaggctatt agattaagta gtgaacatat caaacaaacc atgggtgagc
     8221 ttagtaaagc acaaagagat caacgcgatc ttggaaagct ttatagtgaa atgttaaatg
     8281 gtataggttt gctcaatcaa aatttaaaag aaatcaatac aagaatgtca gaacaatata
     8341 atcgcttgct tgatatcagt agtgataaaa ttcatcatct tgataagacg ctaagtgcat
     8401 tcgatgaaaa aatagagcgt tttggtaaaa attttgaact ttatgaaaaa gcaatgttgg
     8461 aaagtcaaga aaaggttttt gagggattta aagcaagctt gtttgaaggt atgcataaat
     8521 ttaaagaagt atatgaagaa gaaaaaagta ttgatgctaa aatcaaaatg atggatgagc
     8581 ttaaaaaaga aatgaaagca cttgatgaag aaacaagtca aatgatgagc aagctttctg
     8641 gggatgaaaa tcagaataaa gaaaatgaaa ccaaacaaat agaagatttt tcagagtcta
     8701 agactgaaga aaatcaagat gaaattcaag cagaaatatc taagcaagaa agcaatgatg
     8761 agctaaaaaa tgaagataaa gaaaataaat gaaaaatgag tcaaaagaag atagcaattt
     8821 ttggatagct tatgctgatt taatggcagg attgctgttt gtttttattt tgctaatagg
     8881 tgctattgtt gtaaaatatg ttttaactca aagtgattta aaagaaatca aagataatct
     8941 caataaacaa gaggcacgct tagaggagag taaagaagag cttagaaata aagaagccat
     9001 agtgtttaaa ctaagttctg atttaaacaa tgcttctagt gctttaaatc ttgctaattc
     9061 tcaaaaagca gaattagagg ctaatattac aaattacaag cagttaagta aagatttaaa
     9121 ctcaacttta gataataaag ataagcaaat tttgatttta ctaggtcaac tagagaaaaa
     9181 agatgaagag cttaaaaatt tacaagaaga ttttcaaaaa gctaaagaaa aggtgcaaaa
     9241 tcttggtttg attcgtgaaa atttaagcaa ggaattacaa agtaagcttg ataataatat
     9301 cactatagat gaaaagacag gatctatttc tttgcctgct gaagtacttt ttgataaaga
     9361 ttcttatgtg ttaaaaaatg aggcaaaggc aagtttgaga aaaatcttaa gcgaatattt
     9421 tgatgctatt cttgaagatc caaaaatttt ttctaacatt gaaaatatca ttattgaagg
     9481 acatactgat agtgatggat cttatattta taatttagat ttgtcgcaaa aaagagctta
     9541 tgaggtgatg aattttatct atacttttta taagagtgat aagcttcaaa agcttttaat
     9601 ggcaagtgga cgttcttttt cagatcctgt gtttgtcaac ggagttgaag ataaggataa
     9661 gagtcgtcgc atagaaataa aatttagcat taaaaatgat aatgctttaa aggatgtaga
     9721 aaaattcttt gaatttcatt aaaacaatta gtcctataca aaaaatcaat tttaacggat
     9781 ttgaatttta tattaaaaga gatgatttat taggggaaat taatggaaat aaagctagga
     9841 aacttgcttt ttatatccat caaagatatc ctaaaaatca atcttttgta agttatggag
     9901 gaagccaaag taatgctttg gcggcattaa gtatttttgc taaacaaaga tcatataagc
     9961 ttgtttttgc ttgtgaaaaa atttctactt ttcttaagaa taatccttgt ggaaactata
    10021 ctttagcttt agaaaatggt gttgattttg tagaaaatat ccattcttta tccttaaagc
    10081 aatttgcttt gtctttgtgt aaaaaagatg atgtttttat agaacaaggt atagctaatt
    10141 tagaagctca atatggctat atggaacttg ctcaagaaat tcaaatgcaa agtcaaagtt
    10201 taaagcttga ttttgatatt tttttacctt cgggtacagg cacttcggca gcttttttgg
    10261 caaagtattc taaatttaaa gtatttactt gcgcttgtgt aggtgatatt aaatatctta
    10321 aaaaacaaat tttaacatta gatccaagct atgatttttc aaatttagaa tttttaacaa
    10381 gtgataaaaa atatcacttt gctaagccgt ataaagaatt ttatgagctt tatatggatt
    10441 taaagttaaa gtgcaatata gaatttgact tgttgtatga tattttagga ttaagtatag
    10501 cattaaaaca agagtggaaa aaaccattgc tttatataca tcaaggtgga attttaggaa
    10561 attccactat gttagagaga tataaattta aaaaatcagt ttaaaattcc atagataaaa
    10621 atgattaaaa taatcaaagg tactatatat tttacataat aaaaccaaat tccaaaccat
    10681 gaacttttaa gtgtattgtt attgctaagt tcttttagac tttcttgttt gcctaaaatc
    10741 caacctacat aaatacagca aaaaaatgca gttaaaacaa acaaaatatt tccactaatg
    10801 aaatcaaaac tatcaaaaat gttttttcct ttgatgataa caatatcacg ccaaggccca
    10861 taagttagaa tacaaggaag attgccaagt atgaagataa accctagagt taggttaata
    10921 gaaagatttt tagaatattt aaatttttct tctaatacgc taataataac ttgataaatt
    10981 ggcaagcttg tggttaaagc tgcaatcaag agtaagacaa aaaataaaat acacacaatg
    11041 gtgccaaaat ggatatgaga aaatgctata ggtaaagttt caaaaaccaa agaaggcccg
    11101 ctatctggag caagtcccgc tgagaaaagt gctggaaaaa tcataaaacc agccaaaaca
    11161 gctatgatag tatttaaaac ccctgtataa atagcggttt ttgccatatt ttcattttta
    11221 ttaagatgag atgaaagtgt tatcattacc ccaaaaccta gggataaagc aaaaaagact
    11281 tgtcctaaaa catcgattaa aagttttggt gataaaattt tactaaaatc aggttcaaga
    11341 taaaatttaa ctccagccat agctccatca agggttaaat tgcgtcctac aacaataata
    11401 agacagataa ataataaagg cattaaaaat tttacggatt tttctatacc atctataatg
    11461 cctcttttta aaataatata attaataatt acaaaaacag tggtaaaaat accaactcct
    11521 aaaggattga aggctatttt gtcgttaaaa aactgatgag taaattcttt gcttactaca
    11581 ttggcaagac taaaattccc tagggttaat tcccaaatat aaactaaaac ccatcctcca
    11641 agtaccatgt agtaagccat tatgccaaag cttcctaaaa gtcccatata tccaatactt
    11701 tgccattttt gtttgaaagc atctacgcta tttgtcatcg cttttctgcc tatgacattt
    11761 tcaactaaaa taacaggaat gcctatgata atcatggcta tacaaaaaac taatacataa
    11821 gcaccgccac cattttctcc tacaagatag ggaaaacgcc aagttgctcc aaatcctatg
    11881 gttgctccag caactgttag aatataagtt agtgtgctac tccatgtttg tctttgcatg
    11941 attatccttt cgaaaaagaa ttattttacc taaaaataac tttaaaaact tataagctat
    12001 ccatatagct tatatcgtaa gtatttttta agcgtttgtg tatcgtttcg tgccaatttt
    12061 gagatatgag agagtttaat ttttctaatt tatctaataa attcggattt tgcttaagaa
    12121 tttgatgcgg ggagtaaaaa agttgattga gttcaaatac actaagtgaa gtagaatttt
    12181 tttctaaaat tttaatgttt tcatgctttc gtatttgtcc aacttgtaaa actttataat
    12241 accatccact caagcccgtt ttaaaaattt catgtgtaaa atttgaatta ttgtgaattc
    12301 tagaaatttt tacacaaggt tttctaggtt cgcttacttg cagtattgca tttgaaattt
    12361 gatgtacatc acctatgcaa acattttgtt cgcaaagccc atcgatgctc aaattttcac
    12421 ccattgagcc aaaatttagc tttttattaa gaaatctttc ccatatagga tagttttgac
    12481 aagagttggc aaaaatagcc ttatggtagc ctccatgatg aattttatca gctatttgat
    12541 catctaaaac acctagaaaa tcaatttgtg tttcttctag gtaagtatct ttaataaatg
    12601 cgctttggaa atttttatag tttttaattt tccctatttg caaactttga attttcatgg
    12661 ttctattttt tttaataaat catcagcact gataaaaccc gtgattttta atttttcttt
    12721 tccattttca aagaaaatta aaacaggtgg gccaaaaaca ttaaattctt tcatggtttt
    12781 aatttgttca ttattatttt cgcttacatc aactttgata agtttgtaat tttgcatttt
    12841 ttgtatgatt ctttcatcgc taaaggttaa ttcatctaaa agtttgcaat tttcacacca
    12901 agatgcagta aaatcaagca ttatgggctt tgtatttgtt tgtatttctt gctttaattg
    12961 ttcaaaattg ttgatataat catagcttaa agcatgtttt gaggcagata tagtattgaa
    13021 atttaaagga tttaagaaat ttttagcccc aaaaagtcct cctaggaaaa tacttagaga
    13081 ataagctaaa ataagaatta aaatactttt tttaatttta gaaattattg taaaactttt
    13141 ttcaaaaatt cccataaaaa cactaaaaaa tacacctaaa attccatagg caattaaaat
    13201 gtaattttct tcaataattc tagaaagtat ccaaatagcc atagccaaca taacaaaacc
    13261 aaagaaaatt tttacttttt ccatccaaaa accaggttta ataaaaccta atcctaagcc
    13321 tatgaaaagc aaaggtatac ccataccaaa actcatgata aaaagcgcac taccacctaa
    13381 taaagcattg cctgtattgg ctatataaat taaagcacct gctaaaggag ctgctacgca
    13441 aggacctact attaaagcag ataaaaatcc catgatggct atacctaaaa ctcctttccc
    13501 tttttcgctt tttttatgta taaaggtttg aaatcttaat ggcaattcaa aacgaaaagc
    13561 tccaaacata gcaaaagcaa aagctatgaa aattagagca aaaagaatta aaataatagg
    13621 tttttgtaaa attccttgaa tacttgctcc tagaaaactt gctataactc cagcaatagc
    13681 ataggctaaa gacatgaaaa aaacatagat aaaagagaga aaaaaactat atttttttga
    13741 aaatttagca ttactttttg ctacgataag agaagataaa atcggaatca taggtaaaat
    13801 acaaggtgtt aaggagagta aaagtccata gccaaaaaaa cttagcaaaa tccaaaaaaa
    13861 gttatctgtt gctaaaaaat ttgctataga gctttcttca gattcaattt tagttttttt
    13921 atctgttttt tgagctttgt aaggttttga aatttcaaaa gcatcttttt tagaaatgag
    13981 atcaaagtac caagtttgag gattataaca caagccttgt tcagaacagc cttgaaattc
    14041 gagtttgatt aaatttgtgg tattttttgc aaagcgctct agtaataaat ttggcaaagc
    14101 taaatttaat ttttgataat aaacattttc attacctctt gtagaacttt gaggtagatt
    14161 aatcaaagaa cttatatctt tttcgtttat atataattta agtttattag aataaagata
    14221 aatatctttt ccaagttcaa tatcaattga gatagagtta ttataagagt ttgattttac
    14281 attaaaagct tcatttaaag ataatataga agcaaaacat aaacaaaaac ttaataaaat
    14341 aataccaaaa atacgcataa atttcctaaa aacttatttt ttcctttatt tttagcttca
    14401 attataattt attatggtaa atttacttta aatactttat aaaggtttga aaatgcaaga
    14461 aaataattct ccaaaagcgc aagcgactgt taaaaagaat gaaatttatg tttctgttaa
    14521 aagaaagaaa agtacaatag aatatgaaaa agatttaaag aatttgcaaa ttgagctttt
    14581 gaaatttcaa aatcatgtta aagccaaggg tttaaaggtt cttatactta tagaagggcg
    14641 tgatgcggct ggaaaaggtg gggcgattaa acgtttgatt gagcatttaa atccgcgtgg
    14701 ttgccgcgtt gtggctcttg aaaaacctag tgatgtggaa aaaacacagt ggtattttca
    14761 gcgttatata gcacatttgc cctcagccgg tgagattgtg atttttgaca gatcttggta
    14821 taatcgtgca ggagtagaac cggttatggg tttttgtaca ccgcaacaac ataaagattt
    14881 tttaagagaa gtgcctttgt ttgaaaatat gatttcaaat agtgatatta ttttttttaa
    14941 attttatttt tcagtatcaa aagacgagca aaaaaaacgt tttgaaaaac gccgaagcga
    15001 tccacttaaa caatataaat tatctcctgt ggatcaaaaa tcgcaagaat tatgggataa
    15061 atatacttta gctaaatact ctatgctttt agcatccaat actccaactt gtccttggac
    15121 tattatttct tctgatgata agaaaaaagc aagattaaat ttattgcgtt ttatactttc
    15181 taaggtagaa tatccaaata aaaaaactgg agatttttcc aaaattgatg caaaattagt
    15241 gcgtagtgga gaagaagaaa tacgaaaaat ggaggcgaat ttggaaaaac ttgacagtaa
    15301 aaaagcagat gagaaaataa aagatttaga ttaaggaaaa gaatgcaaaa gctggttgaa
    15361 aatttagcac taaagtacta tgataaagta gttgatttaa gacatcaaat tcatatgcat
    15421 cctgagcttg aatttgaaga agaaaataca gcccatttag tgtgtaaaat tttagatgag
    15481 tttggcatta aatatcaaaa aaatattgca aaaacaggaa ttttagctat tatagaagga
    15541 aaaaagaaga gtcagaaaaa accaaaatgt gttcttttaa gagcggatat ggatgctttg
    15601 cctgtgcaag aaaaaactaa tctaagctat gcttcaaaaa ttgatggtaa gatgcatgca
    15661 tgtggacatg atggacatac agcagggctt ttgggagctg ctttgatatt aaatgagctt
    15721 aaagatgaat tttgtggcac gattaaattt atgtttcagc ccgcagaaga gggaagcggt
    15781 ggagctaaac ctatgataga atcaggtgta ttggaaaatc cttatgttga tgcagttttt
    15841 ggttgtcatt tatgggggcc tttgcttgaa aatactgctc aaattgtaag tggtgaaatg
    15901 atggctggaa cggatatttt tgatttggaa tttattggca gaggagggca tggagctcat
    15961 ccgcacactt gtatagatcc tataattatg gcaacgcaat ttgtaaataa tatacaaagt
    16021 gttgtttcta ggcgtttagc cccttatgaa gcaggggtga ttaccgtagg tcaaatttgt
    16081 gcaggaacta cttataatgt tattcctgca aatgcttatt taaaaggaac cgtgcgtttt
    16141 ttaaatgata aaacacaaga tattttaaaa agttctctag aagaagtggc tgctgctaca
    16201 gcaaaatcta atggtggaga ttataagctt aaatatacta aagaatttcc tccattgatt
    16261 aatgatgaaa atgctgcttt aatagcaaga aaagcttttg caaaggtctt aggagaagaa
    16321 aatatcattg tttcttctaa acctgacatg ggggctgaag attttgcttt tttaacacga
    16381 gaaagaatgg gagcttatgt atttgttgga atttcaaagg atttaaatca tccagctttg
    16441 catcatagtt ctactttttg ttgggatgat gaaaatttaa aagtcttaat gcagggtgat
    16501 gtgatgatgg ctttagaatt tttaaattta taaaatagaa ttaaaatttc acaaaaaatt
    16561 cacaaaaaat gagtaaaatt taatcttgat ttttctttag gatttgttat tatgaaaaag
    16621 aaggttattt taatcatttt aattgcaata cttggaagtg ttggggctta ttttattttt
    16681 tttaataatg atgaaaaaat cagctattta actcaaaaaa tacaaaaaaa agatatatct
    16741 caaaccatag aggcagtagg aaaggtatat gccaaagatc aagttgatgt gggtgctcaa
    16801 gttagcggac aaattataaa actttatgtg gatgtgggaa ctcatgtaaa gcaaggtgat
    16861 ttgatcgctc aaattgacaa agataaacaa caaaatgatt tagatattac aaaagctcag
    16921 cttgaaagcg ctaaggctaa tttagagagt aaaaaagttg cccttgagat tgcgaataag
    16981 caatatcaaa gagagcaaaa actttatgca gctaaagcaa gttctcttga aaatttagaa
    17041 actcaaaaaa ataattatta tactttaaaa gctaatgttg cagagcttaa tgctcaagta
    17101 gttcaacttg aaatcactct taaaaatgca caaaaagatt tagattatac aaccattact
    17161 gctcctatgg atggtgttgt gattaatgta gctgtagatg aaggacaaac agttaatgct
    17221 aatcaaaaca ctcctactat agtccgtata gctaatttag acgaaatgga agtaagaatg
    17281 gaaatagcag aggctgatgt gagtaagata aaagtaggaa cagagcttga tttttctttg
    17341 cttaatgatc ctcaaaaaac ttatcatgct aagattgcaa gtatagatcc agctgatact
    17401 gaagtgagtg attctagtac aagctcaagc tcatcaaatg ctatttatta ttacgcaaaa
    17461 ttttatgtag ccaataaaga tgattttttg cgtattggta tgagtataca aaatgaaatt
    17521 gtcgtagcga gtgcaaaggc tgttttagca gtgccaactt atgcaattaa aagcgatcca
    17581 aaaggttatt atgttgaaat tttagaaaat caaaaagctg ttaaaaaata tgtcaaactt
    17641 ggcattaaag attctatcaa tactcaaatt ttagaaggcg taaatgaaaa tgaagaattg
    17701 atagtaagct caagtgctga tggcttagcc actaaaatga agttgagatt ttaatgattt
    17761 ttcttaaaaa tatttgcaag aatataggcg aaaatgccat tttaaaaaat gtaagtttaa
    17821 gtatagaaaa aggtgaattt gttgctatta taggacaaag tggaagtggt aaaacttcac
    17881 ttttaaatat cataggaaca ttagatacgc caagtagcgg aacttatgtt tttgatgagt
    17941 atgaagtcac taaacttaat aacgatgaaa aagcaagatt aaggcgtgaa aaaataggct
    18001 ttatatttca aagatataat cttttaagct tgcttagtgc taaagaaaat gtttctttac
    18061 ctgcagttta tgcgggaaaa aatttacaag aaagaagtca aaatgctaaa aaactcttaa
    18121 atgatttaga attagctcac aagttagatt ctaagccaaa cgaattaagc ggagggcagc
    18181 aacaacgcgt ttctatagca agagctttaa tcaatggcgg agagcttatt ttggctgatg
    18241 agccaacggg agctttggat agtaaaagcg gtattatggt gcttgaaatt ttacaaaaac
    18301 ttaacgagca aggtcatact atagtcttag taactcacga tccaaaaatt gcagcacaag
    18361 ctaaaagggt tatagagatt aaagatggag aaattttaag cgatactaaa aaggaaaaag
    18421 ctcaagaaaa acttatttta aaaacaatgc ccaaagagaa aaaaacactt actttgctta
    18481 aaaatcaagc ctttgaatgt tttaagatag cttattcttc catacttgca cacaaacttc
    18541 gttctatttt aactatgctt ggaatcatca taggtattgc ttctgtagtt tgtgttgtag
    18601 ctttaggatt aggctctcaa gctaaagtgc ttgagtctat tgcaagactt gggacaaata
    18661 ctattgaaat tcgccctgga aaaggatttg gggatttgcg ttcgggtaaa acaaggctta
    18721 attttagtga tttagaaaca ttaagatctt tagaatattt agaagcagtt gatgctcatt
    18781 caaatacttc aggagtggca acttatacca atatttcttt aagcgcaaga gctgaaggag
    18841 taggggtaaa taattttgct atagaaggtt taaggataga tgcgggaaga attttaaata
    18901 atgatgatgt aaaaaatagt accaatgttg ctgtattgga ttttaatgct aaaaaaaatc
    18961 tttttcctga tgaaaaaagt gaaaatattt taggtcgtgt ggtgcttttt aattctcaac
    19021 cttttaagat cataggagtt ttgcaaaaag atacagacaa gcctatagaa gataatgtag
    19081 tacgtcttta tataccctat acaacactga tgaataagct tacaggagat agaaatttgc
    19141 gtgaaatcat agttaaggtt aaagatgatg tgagttcaac tttggctgaa aatgctatta
    19201 taagaatttt agaaattaaa cgcggacaaa aggatttttt tacttttaat tctgacactt
    19261 ttaagcaagc tattacagca aataaacgca ctacaaccat acttaccgct tgtgtggctg
    19321 tgattgcttt gattgttggg ggtataggag tgatgaatat catgcttgtt tctgtaagtg
    19381 aaagaacaag agaaataggc atacgcatgg ctataggggc tagaagagaa gatattatga
    19441 tgcagttttt aatcgaagcg gttatgattt gtactatagg ggcgatttta ggtgtgattt
    19501 tatcgatttt tgttattttt gcttttaata ctttaagtac ggattttcct atgattttaa
    19561 atgcctattc tgtgcttttg ggacttttaa gttctatgtt tatcggtgtg gtttttggtt
    19621 ttttccctgc aagaaatgca gcaaatttaa atcctattag tgcattatca aaggaataaa
    19681 atgaaaataa tacttagcat ttttttagca tttttcttga gcgcttgtgg tgtaaaactt
    19741 agcttgccta aagaagttga tttaactcaa gaacaaatga aagatttaaa tcttacttat
    19801 gattggtata gatcttatga taatgcaaaa ttaaatgaat ttctaaattt tgttttattg
    19861 aataatagtg atattaatat tgctagaaaa actttgcatt cggctttggc tagagctgat
    19921 ttgattgatt atgatttata tccgacttta agtggaaatt tgggttttgg tggagataaa
    19981 gatttaaatt caggcaaaca aagtaaaaat ttcaataatt ctttaaattt aagctatgag
    20041 cttgatattt atggcaaatt aagagatagt gcaagtgcga gtgaatttag tgcaaaagca
    20101 agtgcttatg atcttgaaaa tttaaaaata agtatgatca atacagcttt aaatgatgtg
    20161 tttgagctgg cttattttaa cgatgtagat aaattgcttc gagcttatct ttcaaattta
    20221 gaacaaatga aagagcttta taactataaa tataagcttg gaaaaataga agaattagat
    20281 cttttaaaca tagagcaaag cttattaaga gctaaacaaa atttattaag caatgatcaa
    20341 aatcgtaatt tactcataaa aaatttacaa gatttattgg caaagcaaga aggttttgct
    20401 tatatagagt attttaaaac tttatcttta aatgatttta aaaccttaag tcctgatttt
    20461 aatatacctt taaaagcttt agcgtaccgt gcagatgtga gatctaaact caatagctta
    20521 aaatcagcct ttaaggatta ttcttccatg caaaaatcta ttttgcctag tatttcttta
    20581 ggtggagcat taagcggaag tgataaaaaa attgatgata gttttaaatt tgaaatttta
    20641 agtggtaatg ttaagatttc tttacctttc ttagattatg gtagggtaaa gcaaaatatc
    20701 aaaatttcac aatttgctta tgagcaactt ttaatttctt atgagcaagc tttgcaaagc
    20761 gcgatgaatg aatttgcatt gaattataaa gattatcaaa gcgacacttt gcttttgcaa
    20821 aatttgcaaa atattaacat taaacaagag cttatcacta aggcgtatta tgaaaaatat
    20881 attttaggaa aaagtgaatt aaaagattat ttggatgcaa acaatacttt aaattctacc
    20941 cagcaagaat ttttaagagc tagatttaat cttttaaaaa ccattaattc ttactatcaa
    21001 atcacagctt taagttttaa tgatgaaaac ttagaatttc ctaagtatta aatttaataa
    21061 tcgatgatat tttttaaatc ctcgagtaat tttttagcca tcagctcata gccttttata
    21121 gtaagatgta catcattgag cgaaagcttt tgttctatcc atttgttttt tcctccacta
    21181 tcttgcataa actgatgcat atcaaaaata agagtttttt cttctttggc aacttcatat
    21241 aatgctttgc gtatggtaaa aaaatcagga gcaagcttgt agtttttacc ttgtttttga
    21301 actacagttg gtggagagat tagcatgata acagcgtttt tattgtaagt ttttaaaata
    21361 ctaatccatt tttttaaatt gtttttaaat ttttgttttt caaacccttt aaagagtgca
    21421 tcattagaac cataggcaag aataattaaa tcattgtgta aaagtcctag ttcttttttt
    21481 acaactgttt gattccaaga gagccataaa tcacttttgg caccattgat tgcaatggta
    21541 tctaagaaaa cattattatc tttatttgcg atgaaatatc ctcctagctc agcatctttt
    21601 tgtaaggctg aaatttgcaa aggaagatca agttctagtt ctttataaga ccatttatta
    21661 atttgtgtag ttcttaactc gtagctttgg ttttttgcat ctttgatgct aaaagcattg
    21721 gtattttgct tggctttaaa taaaaatcct attttgaaat tttttttatc tagggttgta
    21781 tcaaggttga tttttgcgcc tttggttttt gctttggcta ttatcccacc taatggaaaa
    21841 ttatgtccag cattagcagg atttcttgag tttaaaattt caaagttttt ataagaataa
    21901 acaagattaa gattttgttg atatttgggc tgtaaaggat aggcaaaacc tatagagtta
    21961 gagcggatta aatatcctct tatgacacgc ggaaagaaat cagccgccat atgagaatct
    22021 ccataaattc taattcctat gttttgattt ttttctaatt ttttttctag atttttaaga
    22081 tcttttttta atacataact tgttaaagca gagtgatttt tgttttgatt gagtatggaa
    22141 tctattgtgt catttgtatt taaattttgt gcataagagc tagtaaaaat aataaaaaac
    22201 aataagataa ttttaaattt atttactagc attttcttcc ttaagtttta tgtgttctaa
    22261 taaaagttta gacatttctc ttgcgccact tggagtaaaa tgaaccccat catctgttct
    22321 tacttttata cttctattgt tttcatcttt tatataagct gagtattgat cattgacact
    22381 aaaaaatagc ttagtgttga taaaaatttc tttattttta agaatttcat cgctgtaaat
    22441 tttattgagc acttgtattt ttttgttcaa atcttctttt tttacaggag ggatttcaaa
    22501 ccaaaaaact ttggctttat gttttttagc gattttaatg atttcatcta cacgacttgt
    22561 gtaaatatct atccaagaag gggagccaaa acgatggtaa tttcctcctt ttttaatatc
    22621 ccaaggatca ttagcgccaa gaagaacaac aagatattta atatttgagt ttttaataaa
    22681 agcttcattg gtggcttttg accagtcaaa ataggattta taagaaaggc ctgtattttg
    22741 tttactaaga tcggttacct taagatttaa atttcttaaa tctctattta aggctattgc
    22801 aacaccttgc attaaagaat ctccgataaa taaaaactca tctccatttt gtagctctaa
    22861 tttggtattg tcgataaaac taatatttgc atcttggatt aaggttagat ttgtttcttt
    22921 atgagaagtg ttttcatcat tttctaaagt gtttagaact ttatctattt tacttaagtt
    22981 ttcatctatt gatttatttt cttgatttgt agtttcttca ttagtttgag gcaagggttc
    23041 gttgcttaaa attgcacgaa tttgttctaa tttaattttg aagccattgg cttcttttaa
    23101 aagatcatta tgaggataga atgcaaagtg atatttttgt tctatataag agctaatact
    23161 ctgattcata actacaacaa ccaagccaag cactataatc aaaataaaga aaaatctaac
    23221 tacactcatc taaaaactcg aataaataaa atcaggaatt ccatctggca taaaagcaaa
    23281 aaccaaaagt aaaataaaag ctatgataaa aggttttagt aaaaatggag taagatttaa
    23341 aatcttaatg caatattctt taaaattaat aaataaagga tagatcataa aaagaacccc
    23401 aaaagcaacc aacatataaa tatcgttata agatggaatt tggaagaaat tataataaca
    23461 agctttaaaa tattctattg catcttctag atttttgcta taataaaaga aaatccaagt
    23521 aaaacataca aattgaaagg ttaaaaatct tcctaaagct ggaatttttt gtaaactaaa
    23581 tttgcttaaa gctagcaaat gtataaaaac tatgccaatg ccatgcaata aaccccaaac
    23641 aataaaagca agtgtattgc catgccacat acctgaaagt ataaaagcga tgagtatgtt
    23701 aactatagtg cgtggcattc cttttctatt gccccctaaa ggtatataga tataatctct
    23761 tataaaggtt gaaagactga tatgccatct agcccaaaaa tcttttaggt tttttgcaag
    23821 ataaggcatg ttaaagttag gcggaagggt aaaacctaac attaaagcaa aagcacaaac
    23881 taaatcaaca tatccgctaa aatcgcagta tatttgaatt gcataggcgt aaattgcgct
    23941 taaaagttgt atgaaattat aagattgtgg aaagtctaaa atacttttag cataaattcc
    24001 aaggtaattg gctattaaaa cttttttaac tataccaaaa acaagcaaga tgatgattaa
    24061 atttgcatgt ttaaattcgc gtttttgata ggcctgttca aagaaaaaag aacttcgcat
    24121 aataggccct gaaagtagtg ttggaaaaaa tgataagaag gttgctaaat ttaaaaaact
    24181 ttctaaacgg cgtttttgat aaacttctac aagataagta atagaagtaa aggtataaaa
    24241 actaattcct attggtaata ctaaatcaat atttaaaaat tctaaaccga aaaaatttaa
    24301 tatctcatca acacttcctt tgatgctagg aaagtattta aaaaaacata aatttaaaat
    24361 aataaaagcc atgcaagtag cgaaaatata acgcttgcga cgcacaaaaa ttagcaaggc
    24421 aaaatagtgt ataaaaaagg tatatataaa taaaactaag gcgaaataag gattgatt
//
LOCUS       DAPIWB010000018        23992 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.019, whole genome shotgun sequence.
ACCESSION   DAPIWB010000018 DAPIWB010000000
VERSION     DAPIWB010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23992)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23992)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23992
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.019"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..562)
                     /locus_tag="RJ266_000601"
     CDS             complement(<1..562)
                     /locus_tag="RJ266_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HDV7354378.1"
                     /translation="MIRSLYYLKAMGFNFVDTHTNHFEQVQNFQELKQLVSSCTLCQF
                     SKTRKFSLMEPKIKNAKLLILDVFGQKSENESGILLNSKKGEKLKHYIYQILGLCDED
                     FYFSYLFKCFCNGKFDDFSLQSCLPFFWNELKLIQPAFLLCLGEYTFKSLGFKDYHIL
                     KGEVFAYKNFFIMPSYDLDFIEKNPSY"
     gene            complement(559..1038)
                     /locus_tag="RJ266_000602"
     CDS             complement(559..1038)
                     /locus_tag="RJ266_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV7354379.1"
                     /translation="MSEFKIIDLRQEDLDILQEMIIEFAKYEDMLDFLQCTKEKLEHS
                     LLKNKFARAFLLKENEKTIGYMIYFYTFSSFWGSGGIYLEDIYIRENFRKKGYGKAVF
                     KFLGEICKKENLKRLDWVCLNDNILGINFYESLNAKHLKQWRNYRLSGENLEKLCDL"
     gene            1169..1303
                     /gene="rpmH"
                     /locus_tag="RJ266_000603"
     CDS             1169..1303
                     /gene="rpmH"
                     /locus_tag="RJ266_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HDV7354380.1"
                     /translation="MKRTYQPHGTPRKRTHGFRVRMKTKNGRKVINARRAKGRKRLAV
                     "
     gene            1300..1626
                     /gene="rnpA"
                     /locus_tag="RJ266_000604"
     CDS             1300..1626
                     /gene="rnpA"
                     /locus_tag="RJ266_000604"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HDV7354381.1"
                     /translation="MKNFDKFSTNEEFSSVYKIGKKWHCEGVIIFYLNSYEKKIAVVA
                     SKKVGKAVVRNRSKRILRALFAKFERYLQDGKYIFVAKNEITELSFSRLEKNLKWGLK
                     KLECFK"
     gene            1623..1964
                     /gene="yidD"
                     /locus_tag="RJ266_000605"
     CDS             1623..1964
                     /gene="yidD"
                     /locus_tag="RJ266_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HDV7354382.1"
                     /translation="MICLKILRFYQKFLSPLKPAACRYYPSCSEYALWQFQKKNFFLA
                     FFSTFFRILRCNPFFKGGFDYPRVSKNFYPINLCFKPIFLAEKQLCFLYIPYKNKSFY
                     LIKIIFKRTNQ"
     gene            1961..3553
                     /gene="yidC"
                     /locus_tag="RJ266_000606"
     CDS             1961..3553
                     /gene="yidC"
                     /locus_tag="RJ266_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002875431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HDV7354383.1"
                     /translation="MNNSNNIFQQKRILLAVVISFLFFVIYDYFFIPKQPLKIEQNIT
                     QKNQQNTSINNTPNIQNTTTNTPSAALVSQDSVISKVQSKHFEAQIDSFGRISAFYLK
                     DRKYQNEKGEFINLISKENSPYPLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQV
                     LKLTQNLSGLKIEKDITFYPKGNYEIEVKLSKNANYFISPGYRPNIAVDSYTVHGALV
                     MDNKETIETYKDGDVEKDESANNVVMTSAFDRYYATFFYNFDKPLNVAISKDANKNPI
                     VFAYSDNEFKAGGYIGSKEHVILRSIDPRLEAVVEYGWFTFIAKPMFEFLNFLHQYIG
                     NWGWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKGDPQKMNMHMME
                     LYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYFILP
                     ILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLV
                     QQWVINKIFVKEHHKKQAEHEK"
     gene            3550..4368
                     /locus_tag="RJ266_000607"
     CDS             3550..4368
                     /locus_tag="RJ266_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Jag N-terminal domain-containing protein"
                     /protein_id="HDV7354384.1"
                     /translation="MKIEAIDLQSALTEASRSLECSVMDLEYEIIQHPRKGFFGFGRK
                     KAIIEAKAKKRILKKNPKKEFTSSKNHKPETHELKQENKIEIKNEKNKSQKEKYTVKS
                     DEIFDSFHRESKGVRNTQDILDEIRIQLVKLLESSQFKIELSELRMYDEDCVLIRLDG
                     EDAALMIGKEAHRYKAISYLLHNWINLKYNLLVRLEIAQFLENQIQGMQLYLQSVIEK
                     IKIHGRGQTKPLDGVLIKIALEQLRAEFPDKYVGIKQNNDQRFVVINDFFKKDE"
     gene            4361..5689
                     /gene="mnmE"
                     /locus_tag="RJ266_000608"
     CDS             4361..5689
                     /gene="mnmE"
                     /locus_tag="RJ266_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HDV7354385.1"
                     /translation="MSDTIAAIATAHGVGSISIVRLSGERALEFALKLSHKTKLTPRH
                     ATFTKLFNQNNEIIDEAIMIYFKAPYSFTGEDIVEFQTHGGFSVSEVLLEELVGLGAR
                     LALAGEFSKRACLNGKMTPLKALNIQDLILSKSALAAKIIARNMQGNLGELLEKIRTD
                     LVKTLAFVETSIDYADDDLPSDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIA
                     IVGKPNVGKSSLLNALLSYERAIVSDIAGTTRDTIEESFKLGTHLLRIIDTAGIRESK
                     DAIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDL
                     ENVFKNTQNKNFIKLSAQKDITLLKEELQNYFNSFDSEGIMVSSLDLINACKISSEAI
                     FRAKGLLEESSLELFAFELNLAINELARFTKDFQRDEILDEMFGNFCLGK"
     gene            5700..7886
                     /gene="purL"
                     /locus_tag="RJ266_000609"
     CDS             5700..7886
                     /gene="purL"
                     /locus_tag="RJ266_000609"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HDV7354386.1"
                     /translation="MDKETIKAHKISDEEYAQILEILGREPNLLELGVISAMWSEHCS
                     YKSSKKYLNGFPTKAPWVIQGPGENAGVIDIGQGMAAVFKVESHNHPSFIEPFAGAAT
                     GVGGILRDVFTMGARVVAGLNSLKFGNIHDEKCGKHQKYLVKGVVNGISHYGNCMGVP
                     TIGGECAFDECFNGNILVNAFALGVCKSEDIFYAKAEGVGNPVIYVGSKTGRDGLGGA
                     VMASDSFNEESKSLRPTVQIGDPFSEKLLMEACLELFKTDYIVGIQDMGAAGLTSSSF
                     EMAGRSGSGMKLYLDKTPMRESGMTPYELMLSESQERMLICAKKGYEDKVIEIFKKWD
                     LDAVVMGEVTNTGKMELFWHDELVGLIPIEPLSEKAPILSRPTSEPKYLSEIKNYKFE
                     LKSSVQELFIQMLQNENINNKAFIYDQFDSSVQTNTIKADGRLGASVIRIKENGASVA
                     MAIECNSRLNYVNPKIGAALAVASAGRKVACTGAKPLAISDCLNYGNPQNPEVMWQFA
                     QGCEGIKEACKELNTPVVSGNVSLYNETEGVSIYPSPTIVSVGVLEDANKTLKASFEK
                     ENLSVYLLGESLGEFSGSMVMKIQDKKVSGSLKELDYKAELALWDLLYKANQNSLLEC
                     ANSVGIGGIAMTLAKMFAISSVGANLTSDFDDEKMIFDESASRAIIGLSKENEEAFLN
                     LAKEFGVKAYKLGVSTSQKHFKLDSIELSKAELDKLYFESFKEQIQ"
     gene            7883..8653
                     /locus_tag="RJ266_000610"
     CDS             7883..8653
                     /locus_tag="RJ266_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ family molecular chaperone"
                     /protein_id="HDV7354387.1"
                     /translation="MTLVLIILVVLVFYWYYKTWGKQDFLNSATRGAKGFAKGFARGV
                     MEERMDEFKRRMNYYVIALLAKIAKSDGRVSENEAEMIKDLLDANAKDEKERAFLKAS
                     FNEHKENLSDAFYVAKDFLKEVPLPKNERFNVLRVLVFMALIDADFNAKKREILEQIA
                     KAFDIAKSELDAFVASLSNLKSTKKELSLDEAFAILELSNNADLNAVKKQYRNLAKKY
                     HPDILNANNVSEEELKIGIEKFQKINEAYEKVKKHLER"
     gene            8656..10188
                     /gene="purH"
                     /locus_tag="RJ266_000611"
     CDS             8656..10188
                     /gene="purH"
                     /locus_tag="RJ266_000611"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HDV7354388.1"
                     /translation="MRALLSVSDKEGIVEFGKELENLGFEILSTGGTFKLLKENGIKV
                     IEVSDFTKSPELFEGRVKTLHPKIHGGILHKRSDENHIKQAKENEILGIDLVCVNLYP
                     FKKTTIMSDDFDEIIENIDIGGPAMIRSAAKNYKDVMVLCDPLDYEKVIETLKKGQND
                     ENFRLNLMIKAYEHTANYDAYIANYMNERFNGGFGASKFIVGQKVFDTKYGENPHQKG
                     ALYEFDAFFSANFKALKGKASFNNLTDINAALNLASSFDKAPAIAIVKHGNPCGFAIK
                     ENLVQSYIHALKCDSVSAYGGVVAINGTLDEALANKINEIYVEVIIAANVDEKALAVF
                     EGKKRIKIFTQESPFLIRSFDKYDFKHIDGGFVYQNSDEVGEDELKNAKLMSQREASK
                     EELKDLEIAMKIAAFTKSNNVVYVKNGAMVAIGMGMTSRIDAAKAAIAKAKEMGLDLQ
                     GCVLASEAFFPFRDSIDEASKVGVKAIVEPGGSIRDDEVVKAADEYGMALYFTGVRHF
                     LH"
     gene            10287..11879
                     /locus_tag="RJ266_000612"
     CDS             10287..11879
                     /locus_tag="RJ266_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HDV7354389.1"
                     /translation="MFKTIGFKVSAAIFVVLLISFIVMQVILNLDFKNTANKMSRANL
                     DTVSTSVFQTMRMAMNLGDPEKIKEAIEDAKSIEGISDIKIYPSKDTIDLFEMKAPQI
                     SNDKRIIEQFSNPKIQALEENVNGVVHLRLIRPLIADESCVACHANANVGSVIGVMDI
                     SHSLEGVQKDISKTSQSYIVIFTIALIFTLCVVLLMLKVVVGKPVLELLNHAKELAQG
                     SGNLKARISVKGQDEIALACGYINQFIEKTHKAVSGASHNSKNVEKQSNLLNSNAISL
                     SDISSQSHKQIDQSFKLGANVGNELGELASLSNKANSANEKSFLLLEQMLKSLFNVAN
                     KVSTVSQNENELAKKVENMVNQAGNIQKATQMMDEIADKTNLLSLNAGIEAARAGAFG
                     RGFSVIAEDVRQLAQNSEEFLGNVAQITKELLQSINEVSAELKKNAQSVQALNDDTAL
                     LVDDANEVKLCNEDARALVTQCTEKIKISQENIQNLLSRMQENVEVSEKNEEISKILL
                     QVADELKIVCHNLESELNQFQI"
     gene            11889..12323
                     /locus_tag="RJ266_000613"
     CDS             11889..12323
                     /locus_tag="RJ266_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HDV7354390.1"
                     /translation="MKKTLQIALAAAFFAGCASTSVTSSTSKGNNELVQNQLFKIEKI
                     IVNGKTFDPKNAEENPNISFENNKFYGYSGCNRFFGSYQTKADTLQIEGDRVASTQML
                     CHPMDVMDFENSFLSNFKGIFKISNENGKLVLSNDEMKIFFK"
     gene            12422..13399
                     /locus_tag="RJ266_000614"
     CDS             12422..13399
                     /locus_tag="RJ266_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HDV7354391.1"
                     /translation="MIKSIPEWSEQEYLMLSLPHKKSDWNPYLEEILQSYKEFVKAVS
                     EFQKVLLIAPKQSDFENFKDIKNVEYFKCDTNDTWIRDFGAIDIIENGRLKALDFTFN
                     AWGNKFQSELDNAVNSKLFKEKFKEELKKVDFILEGGSIDFNGEGVMLTSSHCLLNEN
                     RNSHLNKTQIDIKLKEIFGLKQIIWLENGFIKGDDTDHHIDTLARFIDKNTIAHCICE
                     DEEDEHYLPLQKMKEELKKTGFDLVELPIPNPLYYEGRRLGATYANFVFINNALIVPF
                     YKDKNDEIIAKRLSKALPSHKIIGVDARVFLRQNGSLHCSCQNRFKGLR"
     gene            13396..14283
                     /locus_tag="RJ266_000615"
     CDS             13396..14283
                     /locus_tag="RJ266_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HDV7354392.1"
                     /translation="MSLQKKATLVASLCAIVLALVKFIVGLTSGSVAVLSSAIDSLMD
                     FAISAFNFLALKKSSQKANENYNFGFSKIEALMGLLEGVFIVGVGIFIFYESILKIYY
                     KEEIKDLNSSIYVMIFALIMTFFLVLFLNYVAKKTKSLIIESDALHYKTDCLTNACTL
                     GALVLIYFTNLHIIDAIFGIVISLYTAFSAFKIIKKALAFLMDEALPKEQVDKICTLI
                     SNNPEIISYHELKTRKTPSCNYLSVHLVFCPIISLLNAHKISDEIEEGVRKMFENEKW
                     DIQIHLDPYDDAEQERQRQ"
     gene            14280..15152
                     /locus_tag="RJ266_000616"
     CDS             14280..15152
                     /locus_tag="RJ266_000616"
                     /EC_number="3.5.1.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-carbamoylputrescine amidohydrolase"
                     /protein_id="HDV7354393.1"
                     /translation="MKIALIQQKFHLNKEQTIKKTCEFIEEASKQGAELVCLGELHQS
                     EYFCQSENVDFFDYANDYEKDVKFWANIARKNQIVLIASLFEKRSAGLYHNTAVVFEK
                     DGSIAGKYRKMHIPDDPCFYEKFYFTPGDLGFEPINTSLGKLGVLICWDQWYPEAARI
                     MALKGAEILIYPTAIGWFNKDKDEEKQRQLNAWLGVQKGHAIANGLYVVAINRVGFEK
                     DVSGVEEGIRFWGNSFVFGPQGEELCLLDSQNECVKIIEIDKKRSENVRRWWPFLRDR
                     RIEYFADLTKRFID"
     gene            complement(15164..16510)
                     /locus_tag="RJ266_000617"
     CDS             complement(15164..16510)
                     /locus_tag="RJ266_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HDV7354394.1"
                     /translation="MKSCLYFTFIVLFLTACSTKNLTSLHHENLEQKNENQHYAKLEY
                     EQNVSILPQFAYDINFDAKRYKKYFFKPWHDSFKNYKGQNIFWSFPLYLNSKNTYYFF
                     NKQIIPLSWFKNAINNANIQEFGKLNQKALIIQNTIIKNLPTQRAILKNPFFENEGIP
                     FDYASDGILNAGTPVLISHFSKDKRYAFVLGEAGFGFVESKNLEFFSNDRAKIYENLN
                     FITPLKEKFAIYSEDGKFFFESRIGAIYPYYKEDKNYFYGKIGSKKYKISKKDVSKFP
                     LQFNDKNLKNQLSQVLNLPYGWGGYNFERDCSLLTRDIFSAFGLYLPRNSAAQKNSFN
                     HFDISTLSNSQKKDFLNRFGKAYLSLLYLPGHIMLYAGQITDNNIAIHNIWGLRKDAT
                     QRLLISSSVITSLEIGKNEILEDNLLLSRLKEISFINLNEQEKEQIKSYLENIQNK"
     gene            16559..17902
                     /gene="pif1"
                     /locus_tag="RJ266_000618"
     CDS             16559..17902
                     /gene="pif1"
                     /locus_tag="RJ266_000618"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase Pif1"
                     /protein_id="HDV7354395.1"
                     /translation="MLDKLEKILAYDNVFLSGGAGVGKSFLTNELIKSYRKQKKLAIA
                     LGSSALSAFNIGGVTLHSFFCLGYCDDMMKLSALDRNQKQKEKLTKLKELLKTIELII
                     IDEISMVSASVFEMIGFRLKNSQFNGKILVVGDFFQLPPVIKEKKETLFNHSYYAFSS
                     FFWQDLNFKNIKLSQPKRTQNMEFYNHLSLIRQGFLDEKILSFFESLRIDYKELENLE
                     NDYTLLCGINKKVNNINQEKLSKLETPLVCFKAQVKKEDKRIKDEELDSWIRSLNILE
                     ELNIKIGARIIFCVNNWDKNYYNGEQGIIEDILYEEEKIYISIIKNNGMKILLEPYTF
                     FMEELEQSGKDFVVNILASVTQFPIKLAYAITIHKSQGMSIEKLVCDIDHIFENGQLY
                     VALSRATNPNTLKIYSTKKINFGFYFANILKIDSNVIEFYKKHNFLDLEIQEQII"
     gene            17912..18646
                     /locus_tag="RJ266_000619"
     CDS             17912..18646
                     /locus_tag="RJ266_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354396.1"
                     /translation="MKKIFLSVFLVLSLNAQNLEIDKIRTDLYSKSGTNVLKKVEISL
                     EFDGNNLKENENKLIDAVNTVISGFFYEDIFTEIGKNNFKKTLEKFLDKKYKIELDDI
                     YIISLSGVEKFDLEEFKRFLESTEAKEKGMGSEVKKALENLEVPKTQVPSVEKIPAPS
                     VPNLEVKQVEQLFKDPDEENKNDNGEINIDNLNTPKMTPDIEEKIKRDLIANPPQIFK
                     ENNASKPYHLPQTGYDIKLDENSTQN"
     gene            complement(18643..19152)
                     /gene="lolA"
                     /locus_tag="RJ266_000620"
     CDS             complement(18643..19152)
                     /gene="lolA"
                     /locus_tag="RJ266_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HDV7354397.1"
                     /translation="MKKTFLIFFIFIGQLFALDLNFNTFSSNFTQIVKSKNSTLSYSG
                     HFILSKDQAYWSYDTPSKKEIYINKNQVTIVEHDLEQVIFSHLDNIPNLNEIFKKASL
                     IDKDKLAAKYDNINYTIKLNQEQIQSISYKDEFENDVIINLNNQIKNPKINSDIFKAK
                     IPQNYDIVR"
     gene            19252..21840
                     /gene="secA"
                     /locus_tag="RJ266_000621"
     CDS             19252..21840
                     /gene="secA"
                     /locus_tag="RJ266_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HDV7354398.1"
                     /translation="MFLNTLKAVFGTKNDREVKKYFKRVAQINALEGNYQNLSDDELK
                     AEFAKFKEQILSGEKNENDVLNDVFAIVRETGKRTLNMRHFDVQLIGGMVLHDGKIAE
                     MKTGEGKTLVATLPVVLNAMSGKGVHVVTVNDYLAKRDAEQMSAIYNFLGFSVGVVLS
                     SQNSDIEHKQAYDCDITYGTNNEFGFDYLRDNMKFSKAEKVQREHNFVIVDEVDSILI
                     DEARTPLIISGPTNRTLDGYIKANEVAKQMQKGEAVLPPAKPEGDFVVDEKNRNILIT
                     EAGITKAEKLFGVENLYSLDNAILAHQLDQALKAHNLFEKDVHYVLRNNEVIIVDEFT
                     GRLSEGRRFSEGLHQALEAKENVKIQEESQTLADITFQNYFRMYNKLAGMTGTAQTEA
                     TEFSQIYSLDVISIPTNIPIKRQDKDDLIYKTQNEKFKAVIEEIKKANAKGQPVLVGT
                     ASIERSEVFHNMLVKEKIPHHVLNAKNHEQEALIIQDAGKKGAVTIATNMAGRGVDIK
                     IDDEIRALGGLYIIGTERHESRRIDNQLRGRAGRQGDPGISRFYLSLEDNLLRIFGGD
                     RIKSIMDRLGIEEGESIESRIVTRAVENAQKKVESLHFESRKHLLEYDDVANEQRKTI
                     YRYRNELLDENYDIRAKISQNIAEYSANVMNDYMLDESGSNVNFENLKAKILYECSTQ
                     ISEKDFENLSVIEMQDKLSQILENSYNEKMLRLEIKELRNIERILYLQVLDNAWREHL
                     YQMDILKTGIGLRGYNQKDPLVEYKKESYNLFLELVNRIKFDSIKLLFSVQFNQEEAQ
                     NLENKANEENEKLLQSSVEMGASEDNLGEAEFKKVPRNAPCPCGSGKKFKECHGKSGP
                     KQGILA"
     gene            21837..23042
                     /locus_tag="RJ266_000622"
     CDS             21837..23042
                     /locus_tag="RJ266_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7354399.1"
                     /translation="MNKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVA
                     MAIMNGFDKEFEKRFFVMNYPITILPKFYAPVNDEFIDELRKTFPNLLFSPYLSTQVV
                     VKGDNRFEGGVLFGVNFNDEKKINEVVAKALKDENLSGFDILVGSALTDEFGLHKNDK
                     LSLIFSNLNPSGFSLVPQTKRFDVKARFTSGLAFYDKAYMYTDVDALKKVLGMPKNPN
                     YDGIHVYSDNAFEDVEKIKSYLKDDYAVVGWWEQNKNFFSALELEKRALFIVLMLIIL
                     VASLNIVSSLLMIVMNRRSEIALLLALGASKNEVKKSFFALGMLIGGGGMIVGVVLAF
                     FALWLLGNFDIVTLPADVYGTSKLPLDLSLMDFSLTIVGALIIIALSSFYPAKKATQI
                     NILDTLRNE"
     gene            23065..23850
                     /locus_tag="RJ266_000623"
     CDS             23065..23850
                     /locus_tag="RJ266_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDV7354400.1"
                     /translation="MSLFTQKNKNFKPLKPLSKSKIITNLILLILFLILFCYCSFSIS
                     TYHFDFSTIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRFLSTF
                     YIELIRGTPLLVQVLLIYYIIANNLGLDNRYVAGVIILSCFSAAYLAEIFRAGILSIS
                     ISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQ
                     SAQEINSYTFATLEAYVILAITYLVLTLPISIFSRYLERKCQK"
     gene            23912..23987
                     /locus_tag="RJ266_000624"
     tRNA            23912..23987
                     /locus_tag="RJ266_000624"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:23945..23947,aa:Lys,seq:ttt)
BASE COUNT         8604 a         2949 c         4350 g         8089 t
ORIGIN      
        1 cataacttgg atttttttct ataaaatcta aatcataact tggcattatg aaaaaatttt
       61 tataagcaaa aacttcacct tttaaaatgt gataatcttt aaatcccaag cttttaaatg
      121 tatattctcc tagacaaagc aaaaaagcag gttgaatcag ttttagttcg ttccagaaaa
      181 atggtaagca agattgtagc gaaaaatcat caaattttcc attacaaaaa catttaaata
      241 aataagaaaa ataaaaatct tcatcgcaaa gccctaaaat ttgataaata tagtgtttta
      301 atttttcacc tttttttgaa ttaagtaaaa ttccgctttc attttcactc ttttgcccaa
      361 aaacatcaag aattagcaat ttggcatttt ttatcttagg ctccataaga ctaaattttc
      421 ttgttttgga aaattggcat aaggtgcaag atgaaacaag ttgttttaat tcttgaaaat
      481 tttgtacttg ttcaaagtgg tttgtatgtg tatcaacaaa gttaaatccc atagctttta
      541 aataataaag acttcttatc ataaatcaca caatttttct aaattttctc cacttagacg
      601 ataatttctc cattgtttaa gatgtttagc gtttaaactt tcataaaaat taatacctaa
      661 aatattatca tttaagcaaa cccagtcgag tctttttaaa ttttcttttt tgcaaatttc
      721 tcctaaaaat ttaaaaacag cttttccata acctttttta cgaaaatttt ctcgtatata
      781 aatatcttca agataaattc caccgctgcc ccaaaaagac gaaaaagtat aaaaataaat
      841 catatagcct atagtttttt cattttcttt taacaaaaaa gcacgagcaa atttattttt
      901 tagtaaagaa tgttccagtt tttctttcgt gcattgaaga aaatctaaca tatcttcgta
      961 ttttgcaaat tctatgatca tttcttgtaa aatatctaaa tcttcttgtc ttaaatcaat
     1021 aattttaaat tctgacattt ttaacctttt aaaaataatt tcaaaattta tcaaaagaat
     1081 ttaaaaatta ctcttaatca aaagcaattt ataagtaaga ttaagataaa atacaagttt
     1141 attttataat tttttaagga aaaatcaaat gaaaagaact tatcagccac atggcactcc
     1201 aagaaaacgt actcatggtt ttcgtgttcg tatgaaaact aaaaatggtc gcaaggtgat
     1261 caatgcaaga cgcgctaaag gtagaaaaag acttgctgtg tgaaaaattt tgataaattt
     1321 agcacaaacg aggaattttc atctgtatac aaaataggta aaaaatggca ttgcgaaggt
     1381 gtgattattt tttatctgaa tagttatgaa aaaaaaatag cagttgttgc tagtaaaaaa
     1441 gttggaaaag cagtggttag aaatcgttca aaacgaattt taagggcttt gtttgctaag
     1501 tttgaaagat atcttcaaga tggcaaatat atttttgtag ctaaaaatga aatcactgaa
     1561 ctttcttttt ctaggttaga aaaaaatcta aaatggggat tgaaaaaact agaatgtttc
     1621 aaatgatatg cctaaaaata ctccgttttt atcagaaatt cttaagccct ttaaaacccg
     1681 ctgcttgtag gtattatcct agttgttctg agtatgcgct ttggcagttt caaaaaaaga
     1741 atttttttct agcttttttt tctacttttt ttagaatttt aagatgcaac ccttttttta
     1801 aagggggttt tgattatcct agagtttcta aaaattttta tcctataaat ttatgtttta
     1861 agcctatatt tttagcagaa aaacaacttt gttttttata tataccttat aaaaataaaa
     1921 gtttttatct tataaaaatc atctttaaaa ggacaaatca gtgaataatt caaataatat
     1981 ttttcagcaa aagcgtatac ttttagctgt tgtgatttct tttttatttt ttgttattta
     2041 tgattatttt ttcattccaa agcaaccttt aaaaatagaa caaaacatta cacaaaaaaa
     2101 tcaacaaaac acaagcataa ataacactcc taatatacaa aataccacca caaatactcc
     2161 aagtgcggct ttagtttcgc aagatagtgt gatatctaag gttcaaagca agcattttga
     2221 agcacaaatt gactcttttg gtagaatttc tgctttttat ttaaaagata gaaaatacca
     2281 aaatgagaaa ggggaattta taaatcttat tagcaaggaa aatagtcctt atcctttaga
     2341 aatgcgtttt agtgatccaa gtattaactc agaggctttt aaaattcctt atgtcgctaa
     2401 cgctagcaat ctttttgttg atgaaaatgg aagtcaagtt ttaaaactca ctcaaaatct
     2461 ttccggattg aaaatcgaaa aagatattac tttttatcca aaagggaatt atgagataga
     2521 agttaaactc agcaagaatg caaattattt tataagtcca ggatatcgtc caaatattgc
     2581 cgtagatagt tatacggttc atggtgcttt agtaatggat aataaagaaa ccatcgaaac
     2641 ttataaagat ggagatgtag aaaaggatga aagtgctaat aatgtcgtaa tgacttcggc
     2701 ttttgataga tactatgcaa ctttctttta taattttgat aaacctttaa atgtggcaat
     2761 cagcaaggat gctaataaaa accctatagt ttttgcttat agtgataatg aatttaaagc
     2821 aggaggctat ataggttcta aagaacatgt gattttaaga agtatagatc cacgccttga
     2881 agcagttgtt gaatatggtt ggtttacttt tattgctaag cctatgtttg agtttttgaa
     2941 tttcttgcat cagtatatag gaaattgggg ttgggctatc gttgtgatga ctttaattgt
     3001 gcgtattatt ttattcccgc taacttataa gtctatgatt tctatgaata aacttaaaga
     3061 tcttgctcct aaaatgaaag atattagaga gcgttataaa ggcgatccac aaaaaatgaa
     3121 tatgcatatg atggagcttt ataaaaaaca tggtgcaaat cctatgagtg gttgtttgcc
     3181 tatactttta caaattccta ttttctttgc tatttatcgc gttttgctta atgctattga
     3241 gctaaaagca gctccttggg cgttttggat acatgattta tcagtaatgg atccttattt
     3301 tattttgcct attttaatgg gtgcaacgat gtttttacaa cagcttatta cacctatgac
     3361 tatacaagat cctatgcaag ctaagattat gaaattttta ccagtgattt ttactttttt
     3421 ctttatcact ttcccagcag gacttacgct ttattggttt gtaaataacc tttgttcttt
     3481 ggttcaacaa tgggttatca ataaaatatt tgttaaagaa catcacaaaa aacaagcgga
     3541 gcatgaaaaa tgaaaatcga agccattgat cttcaaagtg ccttaacaga agcttcaaga
     3601 agtttagaat gttctgttat ggacttagaa tatgagatta ttcagcatcc aagaaaaggt
     3661 ttttttggat ttggaagaaa aaaggcaatt atagaggcta aagcaaaaaa aaggattttg
     3721 aaaaaaaatc ctaaaaaaga atttacaagt tcaaaaaatc acaaaccaga aacacatgag
     3781 ctaaaacaag aaaacaagat cgaaataaaa aatgaaaaaa ataaaagtca aaaagaaaaa
     3841 tacacagtaa aaagtgatga aatttttgat agttttcatc gagaaagcaa aggagtgcgt
     3901 aatactcagg atattttaga tgagattcgc attcagcttg taaaactttt agaaagctcc
     3961 cagtttaaaa tagagcttag tgaacttaga atgtatgatg aagattgcgt tttgattcga
     4021 ttggatgggg aagatgctgc tttgatgata ggcaaagaag cacatcgtta caaggctatt
     4081 tcttatcttt tgcataattg gatcaattta aaatataatc ttttagtgcg ccttgagatc
     4141 gctcaatttt tagaaaatca aattcaaggt atgcagcttt atttacaaag cgtgatcgaa
     4201 aaaattaaaa ttcatggacg cggacaaacc aaacctttag atggggtttt gataaaaatc
     4261 gctttagagc agttaagagc tgaatttcca gataagtatg taggaattaa gcaaaataat
     4321 gatcaaagat ttgttgtaat aaacgacttt ttcaaaaaag atgagtgata ctatagcggc
     4381 tattgccaca gctcatggtg tgggttcgat ttctattgta agattaagcg gtgaaagggc
     4441 tttagaattt gccttaaagc ttagccacaa aaccaaactt accccccgcc atgctacttt
     4501 tacaaaactt tttaatcaaa ataatgaaat tatcgatgaa gctataatga tatattttaa
     4561 agccccttat agttttacag gggaagatat agtagagttt caaactcatg gaggatttag
     4621 tgtgagtgaa gttttactcg aagaacttgt gggtttagga gcaagacttg ctttagcagg
     4681 ggaatttagc aaaagagcgt gtttaaatgg caaaatgact cctttaaaag ctttaaatat
     4741 acaagatctc atactttcaa aatctgcact tgcagctaaa attatagcac gcaacatgca
     4801 aggaaactta ggagaacttt tagaaaaaat tcgcacagat ttggttaaaa ccttggcttt
     4861 tgtagaaact agcattgatt atgctgatga tgatttacct tctgatttat tagaacaaat
     4921 ttctactatg tgtgaagaaa attctaaaat tttaaaagaa atttatacac tttctcaaag
     4981 caaaaaagga cttatagaag gttttaaaat cgctattgta ggtaagccaa atgtaggcaa
     5041 atcttcgctt ttaaatgcct tgctttctta tgaaagagct attgtttcag atatagcagg
     5101 caccactcgt gatactatag aagagagctt taaattagga acgcatttat tacgcattat
     5161 agatacagca ggtattaggg aaagtaaaga tgctatagaa caaatcggcg tagctttaag
     5221 taaaaaaagt ttagaagatg cagatattat tttggcagtc tttgatgctt caagagtgca
     5281 agataaagaa gatgagaaaa tttttgactt attagcaaat actgataaaa aaatcttttg
     5341 gattttaaat aaaagtgatt tagaaaatgt tttcaaaaat actcaaaata aaaattttat
     5401 caagcttagt gctcaaaaag acatcacttt attaaaagaa gaattgcaaa attattttaa
     5461 ttcttttgat agcgaaggta ttatggtaag ttctttagat cttattaatg cttgtaaaat
     5521 ttcaagtgaa gcgattttta gagctaaagg gcttttagag gaaagttctt tagaactttt
     5581 tgcttttgag cttaatttag cgattaatga acttgcaaga tttaccaaag attttcaaag
     5641 agatgaaatt ttagacgaaa tgtttggtaa tttttgttta ggaaaatgaa aggataaaaa
     5701 tggacaaaga aaccataaaa gcacataaaa tcagtgatga agaatatgca caaattttag
     5761 aaattttagg acgcgagcca aatttattag aacttggggt tatttctgcg atgtggagcg
     5821 agcattgctc ttataaatcc agtaaaaaat atcttaatgg ttttccaact aaagcacctt
     5881 gggtgattca aggcccagga gaaaacgcag gggttattga tattgggcaa ggtatggcag
     5941 cagtttttaa ggtagaaagt cacaatcatc ctagctttat cgagcctttt gcaggtgcgg
     6001 ctacgggagt agggggaatt ttgcgtgatg tttttactat gggtgcaaga gtggttgcag
     6061 ggctaaattc tttaaaattt ggcaatattc atgatgaaaa atgcggcaaa catcaaaaat
     6121 accttgttaa aggtgtggta aatggaattt ctcattatgg aaattgtatg ggtgtgccaa
     6181 ctataggtgg agaatgtgct tttgatgagt gttttaatgg aaatatctta gttaatgcct
     6241 ttgctttagg ggtttgtaaa agtgaagata tcttttatgc taaggctgaa ggtgtaggaa
     6301 atcctgtgat ttatgtgggt tcaaaaacag ggcgtgatgg acttggtgga gcggttatgg
     6361 caagtgatag cttcaatgaa gaaagcaaat ctttgcgtcc tacagtgcaa attggcgatc
     6421 ctttcagtga aaaacttctt atggaagctt gtttagagct ttttaaaact gattatattg
     6481 tgggtattca agatatgggt gctgcagggc ttacttcaag ttcttttgaa atggcaggaa
     6541 gaagtggcag tggcatgaaa ctttacttag ataaaactcc tatgcgtgaa agcggtatga
     6601 ctccttatga gttaatgctt agcgaatctc aagaaagaat gcttatttgt gcgaaaaaag
     6661 gctatgaaga taaggttata gagattttca aaaaatggga tttagatgct gtggttatgg
     6721 gtgaagttac caatacagga aaaatggagc ttttttggca tgatgagctt gtaggactta
     6781 ttcctatcga gcctttaagt gaaaaagcgc cgattttaag tcgccctaca agtgaaccaa
     6841 aatatttaag tgaaattaaa aattataaat ttgagttaaa atcaagcgtt caagagcttt
     6901 ttatacaaat gcttcaaaat gaaaatatta ataataaagc ttttatttat gatcaatttg
     6961 attcaagtgt gcaaaccaat accataaaag ctgatggaag attaggtgct agtgttattc
     7021 gtatcaaaga aaatggtgca agtgtggcta tggctataga atgtaattca cgcttaaatt
     7081 atgtaaatcc taaaatagga gcagctttag cagtagcttc tgcaggaaga aaagttgctt
     7141 gtacgggggc taaacctttg gcaataagcg attgtttaaa ttatggaaat ccgcaaaatc
     7201 ctgaagtgat gtggcaattc gcacaaggtt gcgaaggtat taaagaagct tgtaaagagt
     7261 taaatacccc agtagtaagc ggcaatgttt cgctttataa tgaaactgaa ggcgtaagta
     7321 tttatccaag tcctactata gtaagtgtag gggttttaga agatgcaaat aaaaccctaa
     7381 aagctagttt tgaaaaagaa aatttaagcg tttatctttt gggtgaaagt ttaggagaat
     7441 ttagtggatc tatggtaatg aaaatccaag ataaaaaagt atcaggaagt cttaaagagc
     7501 ttgattataa agctgaactt gcactttggg atttgcttta taaagccaat caaaattctt
     7561 tacttgagtg tgccaatagc gtaggaatag ggggtattgc tatgactttg gcaaaaatgt
     7621 ttgctatttc tagtgtgggt gcaaatttaa caagtgattt tgatgatgaa aaaatgattt
     7681 ttgatgagag tgcaagtcgt gctataatag ggcttagtaa agaaaatgaa gaagcttttt
     7741 taaatttagc taaagaattt ggagtaaaag cttataaatt aggtgtgagt acaagccaaa
     7801 aacattttaa acttgatagc attgagttaa gcaaggctga acttgataag ctttattttg
     7861 aaagttttaa agagcaaatc caatgacttt agttttaatt atactcgttg ttttggtgtt
     7921 ttactggtat tataaaactt ggggaaaaca ggatttttta aactcagcta caagaggagc
     7981 caaaggcttt gctaagggtt ttgctcgtgg ggttatggaa gaaagaatgg atgagtttaa
     8041 aaggcgtatg aattactatg ttatcgcact tttggcaaaa attgcaaaaa gcgatggcag
     8101 ggtaagtgaa aatgaagctg aaatgatcaa agatctttta gatgcaaatg ccaaagatga
     8161 aaaagaaaga gcttttttaa aagcaagttt taacgaacat aaagaaaatt taagcgatgc
     8221 tttttatgtg gcaaaagatt ttttaaaaga agtgcctttg cctaaaaatg agcgttttaa
     8281 tgtcttgcgt gtgcttgttt ttatggcttt aatcgatgca gattttaatg ctaaaaagcg
     8341 tgaaatttta gagcaaatcg ctaaagcctt tgatatagca aaaagcgaat tagacgcttt
     8401 tgtagcaagt ctttcaaatt taaaaagtac taaaaaagaa ttaagccttg atgaagcttt
     8461 tgctatttta gaactttcaa ataatgcgga tttaaatgcg gtaaaaaaac aataccgcaa
     8521 tttagcaaaa aaatatcatc ctgatatttt aaatgcaaac aatgttagtg aagaagagct
     8581 taaaatcggt atagagaaat ttcaaaaaat caacgaagct tacgaaaaag ttaaaaaaca
     8641 tttagaaagg taaaaatgag agcattactt agtgtgagtg ataaagaagg catagtagaa
     8701 tttggcaaag agcttgaaaa tttaggcttt gagattcttt caacaggcgg gacttttaag
     8761 cttttaaaag aaaatggaat aaaagttata gaagtgagtg attttacaaa gagtcctgag
     8821 ctttttgaag ggcgtgtgaa gactttgcac cctaagattc acggtgggat tttgcataaa
     8881 agaagcgatg aaaatcatat caaacaagca aaagaaaatg aaattttagg cattgatcta
     8941 gtttgtgtga atttatatcc ttttaaaaaa accaccatca tgagcgatga ttttgatgaa
     9001 attatagaaa atatcgacat aggtgggcct gcgatgataa gaagtgcagc aaagaactat
     9061 aaagatgtga tggtactttg cgatccgctt gattatgaaa aagtgattga gactttaaaa
     9121 aaaggtcaaa atgatgagaa ttttcgttta aatttgatga taaaagctta tgagcatacg
     9181 gcaaattatg atgcttatat tgcaaattat atgaatgaac gctttaacgg aggttttgga
     9241 gcgagtaaat ttatagtagg acaaaaagta tttgatacaa aatatggaga aaatccacat
     9301 caaaaagggg ctttatacga gtttgatgcc ttttttagcg caaatttcaa agcccttaaa
     9361 ggcaaagcaa gttttaacaa tctaaccgat attaacgcag ctttaaactt agctagtagt
     9421 ttcgataaag ctccagctat tgctatagta aaacatggaa atccttgcgg ttttgctata
     9481 aaagaaaatt tagtacaaag ctatatacat gctttaaaat gcgatagcgt cagtgcttat
     9541 ggaggagtgg ttgcaatcaa tggaactctt gatgaggctt tagcaaataa aatcaatgaa
     9601 atttatgtag aagtaatcat tgcagccaat gtagatgaaa aagctttagc cgtgtttgaa
     9661 ggtaaaaaac gcattaaaat tttcactcaa gaaagtccgt ttttaatccg cagttttgat
     9721 aaatatgatt ttaaacatat tgatgggggt tttgtgtatc aaaacagtga tgaagtgggc
     9781 gaagatgagc ttaaaaatgc aaagcttatg agtcaaagag aggcaagtaa ggaagaatta
     9841 aaagatcttg aaatcgctat gaaaatagca gcgtttacca aatcaaacaa tgttgtttat
     9901 gtaaaaaatg gcgctatggt ggctataggt atgggtatga caagtagaat cgatgcagca
     9961 aaggcagcaa tcgctaaagc taaagaaatg ggacttgatt tgcaaggttg cgttttagca
    10021 agtgaagcct tttttccttt tagagatagc atagatgaag caagtaaagt aggggttaaa
    10081 gctatagtag aaccaggcgg aagtataaga gatgatgaag tggtaaaggc ggctgatgag
    10141 tatggtatgg cgctttattt tacaggagta agacatttct tacattaagt ttaatggaat
    10201 gttatgtttt ttacacataa ttcaataaaa attaaataaa ttatgtgtaa aatatttccg
    10261 aaaaatttta tttttaggaa actatgatgt ttaaaactat aggatttaag gtttctgctg
    10321 caatttttgt ggtgttgctt ataagtttta ttgtaatgca agtgatttta aatttggatt
    10381 ttaaaaatac tgccaataaa atgagcaggg caaatttaga taccgtaagt acttctgttt
    10441 ttcaaacaat gagaatggct atgaatttag gagatcctga aaaaattaaa gaagccattg
    10501 aagatgcaaa aagtatagag ggtattagtg atattaaaat ttatccttca aaagatacta
    10561 tagatctttt tgagatgaaa gcccctcaaa tttcaaatga taagcgtatt atagaacaat
    10621 tttcaaatcc taaaattcaa gctttagaag aaaatgtaaa tggtgttgtg catttaagat
    10681 tgatacgccc tttgattgca gatgaaagtt gcgttgcttg tcatgcaaat gctaatgtag
    10741 ggagtgtgat tggggttatg gatatatcac attctttaga aggtgttcaa aaagatataa
    10801 gcaaaaccag tcaatcttat attgtaatat ttactattgc tttgattttt accctttgtg
    10861 tggttctttt aatgcttaaa gttgttgttg gaaagcctgt tttagagctt ttaaatcatg
    10921 ctaaagaatt agctcaagga agtggcaatt taaaagctcg tatttcagtt aaaggtcaag
    10981 atgaaattgc tttagcttgt ggatatatca atcaatttat cgaaaaaact cataaggcag
    11041 ttagcggtgc aagtcataat tcaaaaaatg tagaaaaaca aagcaatctt ttaaattcaa
    11101 atgctatttc tttaagtgat atcagttcac aaagtcataa gcaaatagat caaagtttta
    11161 aacttggtgc aaatgttggc aatgaacttg gagaacttgc tagtttgtca aataaggcaa
    11221 atagtgccaa tgaaaaatcc tttttattat tagaacaaat gcttaaatct ttgtttaatg
    11281 ttgctaataa agtatcaaca gtatctcaaa atgaaaatga attggctaaa aaagttgaaa
    11341 acatggtcaa tcaagcaggt aatatacaaa aagcaactca aatgatggat gagatcgcag
    11401 ataaaaccaa tttactatcc ctaaatgctg gcatagaagc agctagggct ggtgcatttg
    11461 gacgaggttt ttctgtaatt gctgaggatg ttaggcagtt ggctcagaac agtgaagaat
    11521 ttttgggaaa tgtagctcaa attacaaaag agcttttgca aagtattaat gaggttagcg
    11581 cagaattaaa gaaaaatgct caaagtgtac aagctttaaa tgatgacacc gctttattgg
    11641 ttgatgatgc taatgaggtt aaattatgca acgaagatgc tagggctttg gtaactcaat
    11701 gtactgaaaa aataaaaatt tcccaagaga atatacaaaa tttactttct cgtatgcaag
    11761 aaaatgttga agtaagtgaa aagaatgaag aaatttctaa aattctgctt caagttgcag
    11821 atgagttaaa aatagtgtgt cataatctcg aaagcgaact taaccaattt caaatttaaa
    11881 ggaataaaat gaaaaaaacg cttcaaattg cattagctgc agcttttttt gcaggttgtg
    11941 ctagtacttc tgttacttca tctacttcta aaggtaataa tgaacttgta caaaatcagc
    12001 ttttcaaaat agaaaaaatt atagtaaatg gcaaaacttt tgatccaaaa aacgcagagg
    12061 aaaatccaaa tatcagtttt gaaaataata aattttatgg ttattcaggg tgtaatcgtt
    12121 tttttggttc ttaccaaact aaggcggata ctttgcaaat cgaaggtgat cgcgtagctt
    12181 caactcaaat gctttgtcat ccaatggatg taatggattt tgaaaattct ttcctttcaa
    12241 atttcaaagg aatttttaaa atttcaaatg aaaatggaaa acttgtttta agtaatgatg
    12301 aaatgaagat cttttttaaa taatacccta aagcctcgaa atatcgaggt aatcttctta
    12361 aatttgacaa aagtctaaaa aatgatacaa ttataatttt attatcaaaa aaggtagtta
    12421 aatgataaaa tcaattcctg aatggagtga gcaagaatac ctcatgcttt ctttacccca
    12481 taaaaaaagc gattggaatc cctatttaga ggaaattttg caaagttata aagaatttgt
    12541 aaaagcagtg agtgaatttc aaaaagtttt acttatagct cctaaacaga gtgattttga
    12601 aaattttaaa gatataaaaa atgtagagta ttttaaatgt gataccaatg atacttggat
    12661 acgtgatttt ggagctatag atataataga aaatggtcgt ttaaaggctc ttgattttac
    12721 ttttaatgct tggggaaata aatttcaaag tgagcttgat aatgctgtaa attctaagct
    12781 ttttaaagag aaatttaaag aggaacttaa aaaggttgat tttattttag aaggaggaag
    12841 tattgacttt aatggagagg gtgtgatgct tacaagctct cattgtcttt taaatgaaaa
    12901 tagaaattct catctaaaca aaacccaaat tgatataaaa ttaaaagaaa tttttggttt
    12961 aaagcaaatt atttggctag aaaatggttt cataaaaggt gatgatacag atcatcatat
    13021 cgatacctta gcaagattta tagataaaaa taccatagca cattgtattt gtgaagatga
    13081 agaggatgaa cattatttgc ctttgcaaaa aatgaaagaa gagcttaaaa aaacaggctt
    13141 tgatttagta gaacttccta tacctaatcc tttatactat gaaggaagaa gattgggcgc
    13201 aacttatgcg aattttgttt ttataaataa tgctttaatt gtgccttttt ataaggataa
    13261 aaatgatgaa atcatagcta aaagactttc taaagcttta cctagtcata aaattatagg
    13321 agtagatgca agagtgtttt tacgacaaaa cggttctttg cattgttctt gtcaaaatcg
    13381 tttcaaaggt ttaagatgag tttgcaaaaa aaagcaactc ttgtagcaag tttatgtgcc
    13441 attgttttag ccttggttaa atttatagta ggcttaacaa gtggttctgt tgcagtactt
    13501 tcaagtgcga ttgattcttt aatggatttt gctatttctg cttttaattt tttggctctt
    13561 aaaaaaagct cacaaaaggc gaatgaaaat tataattttg gtttttctaa aattgaagct
    13621 ttaatgggtt tgttagaagg tgtttttata gttggcgtgg ggatttttat tttttatgag
    13681 agtattttaa agatttatta taaagaagaa attaaagatt taaattcaag catctatgtg
    13741 atgatttttg ctttaattat gacttttttt cttgtacttt ttttaaatta tgtagctaaa
    13801 aaaaccaaaa gtttaattat agaaagtgat gctttgcatt acaaaacaga ttgcttaacc
    13861 aatgcttgta ctttaggggc tttggttttg atttatttta caaatttaca tattattgat
    13921 gctatttttg ggatagtgat cagtctttat acggcatttt ctgcttttaa aatcattaaa
    13981 aaagctttag cttttttaat ggatgaggct ttacctaagg aacaagtgga taaaatttgt
    14041 actttgattt ctaataatcc tgaaataatt tcctatcatg aattaaagac gcgtaaaact
    14101 ccaagttgta attatttaag cgtgcatttg gttttttgcc ctataatttc gcttttaaat
    14161 gcgcataaaa tttcagatga aatagaagaa ggtgtgcgta agatgtttga aaatgaaaaa
    14221 tgggatatac aaattcattt agatccttat gatgatgcag aacaagaaag gcaaagacaa
    14281 tgaaaatcgc tttaatacaa caaaaatttc atttaaataa agaacaaact ataaaaaaaa
    14341 cttgcgaatt tatagaagaa gcctctaaac aaggagctga gcttgtttgc ttaggagaac
    14401 ttcatcaaag tgagtatttt tgtcaaagtg aaaatgtgga tttttttgac tatgctaatg
    14461 attatgaaaa agatgtgaaa ttttgggcaa atatagctag aaaaaatcaa atagtgctta
    14521 ttgcttcatt gtttgaaaaa cgaagtgccg gactttatca taatactgca gtggtttttg
    14581 aaaaagatgg ttctatagca ggcaaatatc gcaaaatgca catacccgat gatccttgtt
    14641 tttatgaaaa attttatttt actcctggag atttgggttt tgaacctata aatacaagtt
    14701 taggtaagct tggagtgctt atttgttggg atcagtggta tcctgaagca gcaagaatta
    14761 tggctttaaa aggagctgag attcttattt atcccacggc aattggttgg tttaataagg
    14821 ataaagatga agaaaaacaa agacagctca atgcttggct tggcgtacaa aaaggacatg
    14881 ctatagctaa tggtttatat gtagtagcta tcaatagggt aggttttgaa aaagatgtaa
    14941 gcggggtaga agagggcatt agattttggg gaaattcttt tgtttttggc cctcaaggtg
    15001 aagaactttg tcttttagat tctcaaaacg aatgtgtaaa aatcatagaa atagataaaa
    15061 aaagaagtga aaatgtgcgt cgttggtggc cttttttgcg agatagacgc atagaatatt
    15121 ttgcagattt aactaaaaga tttattgatt aaatcaataa atcttatttg ttttgtatat
    15181 tttcaagata gctttttatt tgctcttttt cttgttcgtt taaatttata aaacttattt
    15241 ctttaagtct tgataaaagc aaattatctt ctaaaatttc attttttcct atttctaaag
    15301 aagtgatgac gctagaactt atgagaagtc tttgggttgc atcttttctt aagccccata
    15361 tattatgtat ggcaatatta ttatctgtaa tttgtcctgc ataaagcata atatgtccag
    15421 gtaaataaag taaactaaga taagctttcc caaagcggtt taaaaaatct tttttttgag
    15481 aattactaag agtgcttata tcaaaatgat taaaagaatt tttttgtgca gctgaatttc
    15541 ttggtagata aagtccaaaa gctgaaaaga tatcacgagt tagtaaagaa caatctcttt
    15601 caaaattata accgccccag ccataaggca aatttaaaac ttgtgaaagt tgatttttta
    15661 aatttttatc attgaattgt aaaggaaatt tagatacatc ttttttagaa attttatatt
    15721 ttttagaacc tatttttcca taaaaatagt ttttatcttc tttgtagtaa ggatagatag
    15781 caccaattct actttcaaag aaaaatttac catcctcgct atagatagca aatttttctt
    15841 ttagtggtgt gataaagttg agattttcat agattttcgc tctatcgttt gagaaaaatt
    15901 ccaaattttt actttcaaca aatccaaatc cagcttcacc taaaacaaaa gcataacgct
    15961 tatctttact aaaatgtgaa attaagacag gggttccagc atttaaaatg ccatcgcttg
    16021 catagtcaaa aggaattcct tcattttcaa aaaaaggatt ttttaagata gctctttggg
    16081 ttggaagatt tttaatgatt gtattttgga taattaaagc tttttgatta agtttaccga
    16141 attcttggat atttgcgtta tttatagcgt ttttaaacca tgaaagtgga ataatttgtt
    16201 tattgaaaaa ataataagta ttttttgaat ttaaatataa aggaaaggac caaaaaatat
    16261 tttgtccttt gtaattttta aatgaatcat gccaaggttt aaagaaatat tttttatatc
    16321 gttttgcatc aaaattaata tcgtaagcaa attgtggcaa aatgcttaca ttttgttcgt
    16381 attcaagttt tgcataatgt tgattttcat ttttttgttc taaattttca tgatgaagtg
    16441 aagttaaatt ttttgttgaa caagctgtta aaaatagcac tataaaagta aaatataaac
    16501 aagatttcat aatcaacctt ttagaaaaaa tagttataat taaagccaag gaaatataat
    16561 gcttgataaa ctagaaaaaa ttttagctta tgataatgtt tttttaagtg gtggtgctgg
    16621 agttggtaaa agctttttga caaatgagct tatcaaatct tatagaaaac aaaaaaaatt
    16681 agccatagct cttggttcta gtgctctatc ggcgtttaat ataggcggtg ttactttaca
    16741 cagctttttt tgtttagggt attgtgatga tatgatgaaa ttaagtgcat tggatcgcaa
    16801 tcaaaaacaa aaagaaaaat taacaaaact taaagagctt ttaaaaacga ttgagcttat
    16861 tattatcgat gaaatttcca tggttagtgc aagtgttttt gaaatgatag gctttagact
    16921 taaaaattct caatttaatg gaaaaatttt agttgtagga gatttttttc aattgcctcc
    16981 cgtaattaaa gaaaaaaaag aaactttatt taaccattct tattatgctt tttcttcatt
    17041 tttttggcaa gatttaaatt ttaagaatat taaactttct caacctaaaa gaacgcaaaa
    17101 tatggaattt tataaccatt tatctttgat tagacaaggt tttttagatg aaaaaatttt
    17161 aagctttttt gaatctttgc gaattgatta taaagaatta gaaaatttag aaaatgatta
    17221 tactttactt tgtggtatca ataaaaaagt aaacaatatc aatcaagaaa aattaagcaa
    17281 acttgagacc ccgcttgtat gctttaaagc tcaggttaaa aaagaagata agagaataaa
    17341 agatgaagag cttgattctt ggattagaag cttaaatata ttggaagaat taaatattaa
    17401 aataggcgct cgtattattt tttgtgtaaa taattgggat aagaattatt ataatggaga
    17461 gcaaggcatt atagaagata ttctttatga agaggagaaa atttatatta gcattattaa
    17521 aaataatggg atgaaaattt tacttgaacc ttatactttt ttcatggaag aacttgagca
    17581 atcaggtaaa gattttgttg ttaatattct cgcaagtgtt acacagtttc ctattaaatt
    17641 agcttatgct attactatac acaaatcaca aggtatgagc attgaaaaat tagtgtgtga
    17701 tattgatcat atttttgaaa atggacagct ttatgtcgct ctttctcgcg ctacaaatcc
    17761 aaatacttta aaaatttatt ctacaaaaaa gataaatttt ggattttatt ttgctaatat
    17821 tttaaaaata gattctaatg tgattgaatt ttataaaaaa cataattttt tagatctcga
    17881 aatacaagaa caaatcattt aaaggcatta aatgaaaaaa atatttttaa gtgttttttt
    17941 ggttttgagt ttaaatgctc aaaatcttga aatagataaa ataagaacag atttgtattc
    18001 taaaagtggg acaaatgttc ttaaaaaagt cgaaatttct ttggaatttg atgggaataa
    18061 tttaaaagaa aatgaaaata agttaattga tgctgtaaat acagtaattt cagggttttt
    18121 ttacgaagat atttttacag aaattggaaa aaataatttc aaaaaaactt tagaaaaatt
    18181 tttagataag aagtataaga ttgaattaga tgatatatat atcatatctt taagcggagt
    18241 ggaaaaattt gatttagagg agtttaaacg ctttttagaa agtactgagg ctaaagagaa
    18301 gggtatgggt agcgaggtaa aaaaagcact tgaaaactta gaagttccta aaactcaagt
    18361 tcctagtgtt gaaaagatcc cagctcctag tgttccaaat ttagaagtca agcaagttga
    18421 acagcttttc aaagatccag atgaagaaaa taaaaatgac aatggagaaa tcaatataga
    18481 taatttaaat acacctaaaa tgactccaga tatagaagaa aaaattaaaa gagatttaat
    18541 cgccaatcct ccacaaatat tcaaagaaaa taacgcaagc aagccttatc atttgccaca
    18601 aacaggctat gatataaagc ttgatgaaaa ttcaacgcaa aattagcgaa ctatatcata
    18661 attttgcgga atttttgcct tgaaaatatc ggagttgatt tttggatttt taatttgatt
    18721 gtttagattg attataacat cattttcaaa ttcatcttta taggatatgc tttgaatttg
    18781 ctcttgatta agcttaattg tatagtttat attatcatat tttgctgcaa gtttatcctt
    18841 atctataaga cttgcttttt tgaaaatttc attaagattt ggaatgttat caagatgaga
    18901 gaaaatgact tgttctagat cgtgctctac tatggttact tgatttttgt tgatataaat
    18961 ctctttttta ctaggagtat cataactcca atatgcttga tctttgctca gtataaaatg
    19021 cccagaataa gaaagtgtag agtttttgga tttcactatt tgggtaaaat tgcttgaaaa
    19081 ggtattaaaa ttaagatcaa gggcaaaaag ttgtcctata aaaataaaaa atatcaagaa
    19141 tgtttttttc atttattttc cttaaaaaaa tatatttttt atgtcattct agctaatttt
    19201 aattaaataa tcgttataat gatagtttga aaaatttata aaggtttaaa aatgttttta
    19261 aatactttaa aagccgtgtt tggcacaaaa aatgatcgtg aagttaagaa atatttcaag
    19321 cgtgtagcac aaatcaatgc tttagaaggc aactatcaaa atttaagcga tgatgaatta
    19381 aaagccgaat ttgcaaaatt taaagagcaa attttaagcg gagaaaaaaa cgaaaatgat
    19441 gttttaaatg atgtttttgc tatagtcaga gagacaggta agagaacttt aaatatgcgt
    19501 cattttgatg tgcagttaat cggtggtatg gttttgcacg atggaaaaat cgcagaaatg
    19561 aaaacaggag aaggtaaaac tcttgtagca accttacctg ttgttttaaa tgccatgagt
    19621 ggcaaaggcg tacatgtcgt tacagtaaat gattatctag ccaaaagaga tgctgagcaa
    19681 atgagtgcga tttataattt tttaggtttt agtgttggcg tggtgctttc ttctcaaaat
    19741 agtgatatag aacacaagca agcttatgat tgtgatatta cttatggaac caataatgag
    19801 tttggttttg attatttgcg tgataatatg aaattttcaa aagctgaaaa agttcaaaga
    19861 gagcataatt ttgttatcgt agatgaagta gatagtattt taattgatga ggcaagaact
    19921 ccgcttatca tcagtggtcc tacaaatcgt actttagatg gttatattaa agccaatgaa
    19981 gtagctaaac aaatgcaaaa aggtgaagca gttttacccc ctgcaaaacc tgagggtgat
    20041 tttgtagtag atgagaaaaa tcgtaatatt ttaattacag aagcaggtat tactaaggct
    20101 gaaaaacttt ttggcgtaga aaatttatac agtcttgata atgctatctt agctcatcag
    20161 cttgatcaag ccttaaaagc acataatctt tttgaaaaag atgtgcatta tgttttaaga
    20221 aataatgaag ttatcatcgt tgacgaattt acagggcgtt taagcgaagg acgtcgtttt
    20281 agcgaaggat tgcatcaagc tttagaagct aaagaaaatg taaaaattca agaagaaagc
    20341 caaactctag cagatattac ttttcaaaat tattttagaa tgtacaataa acttgcaggt
    20401 atgacaggaa ctgcacaaac agaagcgact gaattttctc aaatttatag tttagatgtt
    20461 atttctatac cgacaaatat tcctattaaa agacaagata aagatgatct tatctataaa
    20521 actcaaaatg aaaaattcaa agctgtaatt gaagagatta aaaaagccaa tgctaaaggt
    20581 cagcctgtac ttgtaggaac cgcaagtata gagcgcagtg aagtttttca caatatgctt
    20641 gtaaaagaga aaatccctca tcatgtttta aatgctaaaa atcacgagca agaagctttg
    20701 attatccaag atgcaggtaa aaaaggtgct gtaactatcg ctacaaatat ggcaggtcgt
    20761 ggtgtggata taaaaatcga tgatgagatt agggctttgg gtgggcttta tatcatcggt
    20821 acagaaagac atgaaagccg ccgtattgat aatcaacttc gtggtcgtgc aggaaggcag
    20881 ggtgatcctg gaataagtcg tttttatcta agtttagaag ataatctttt aagaattttt
    20941 ggtggggatc gtattaaaag tattatggat cgcttgggca tagaagaggg cgaaagcata
    21001 gaatcaagaa tcgttacaag agcggttgaa aatgcgcaaa aaaaagttga aagcttgcat
    21061 tttgaaagca gaaagcattt gttagaatac gatgatgtcg caaatgaaca aagaaaaact
    21121 atttatcgtt atcgtaatga gcttttagat gaaaactatg atattagagc taaaatttct
    21181 caaaatatcg ctgaatatag cgcaaatgta atgaatgatt atatgcttga cgaaagcggt
    21241 tctaatgtaa attttgaaaa tttgaaagca aaaattttgt atgaatgttc aactcagatt
    21301 agtgaaaaag attttgagaa tttaagcgtc attgaaatgc aagacaagct aagtcaaatt
    21361 cttgaaaatt cttataatga aaagatgtta agacttgaga ttaaagaatt gcgtaatata
    21421 gagcgtattt tatatttgca agttttggat aatgcttgga gagagcattt gtatcaaatg
    21481 gatattttaa aaacaggaat aggacttcgt ggatacaatc aaaaagatcc tcttgtggaa
    21541 tataagaaag aaagttataa tcttttcttg gagttggtca atcgtattaa atttgatagt
    21601 attaaactac tttttagcgt gcaatttaat caagaagagg cgcaaaattt agaaaataaa
    21661 gccaatgaag aaaatgaaaa gctacttcaa agctcagtag aaatgggcgc aagcgaagat
    21721 aatcttggcg aagctgaatt taaaaaagtt ccacgcaatg ctccttgtcc ttgcggaagt
    21781 ggaaaaaaat ttaaagaatg ccatggaaaa agtggtccta agcaaggaat tttagcttga
    21841 ataaaagcgt tttaaaatat ttacttttta agtatttaag atttgataaa gagcaaccct
    21901 ttatcaatct ttctatgctt ttagcctttt taggagtttg tgtaggactt tgcgttttgc
    21961 ttgtagctat ggcaattatg aatggttttg ataaagaatt tgaaaaacgc ttttttgtga
    22021 tgaattatcc tattactatt ttgcctaaat tctacgctcc tgtaaatgat gaatttatag
    22081 atgagttaag aaaaacattt ccaaatttgt tatttagccc ttatttaagc actcaagttg
    22141 ttgtaaaggg agataatcgt tttgaaggtg gtgtgctttt tggcgttaat tttaatgatg
    22201 aaaaaaaaat aaacgaagtg gttgctaaag ctttaaagga tgagaattta agtggttttg
    22261 atatacttgt aggatcagca cttactgatg aatttggttt gcataaaaat gacaaacttt
    22321 cacttatttt ttcaaatctt aatcctagtg gattttcttt agtaccgcaa actaaacgtt
    22381 ttgatgttaa agcgcgtttt acttcagggc ttgcatttta tgataaagct tatatgtaca
    22441 cagatgttga tgcattgaag aaagtacttg gaatgcctaa aaatccaaat tatgatggaa
    22501 ttcatgtata tagcgataat gcttttgagg atgttgaaaa aattaaatct tatttaaaag
    22561 acgattatgc tgtagtaggt tggtgggaac aaaataaaaa tttcttttca gccttagaac
    22621 ttgaaaaaag agcgcttttt atagtgttga tgcttattat tttggttgca agtttaaata
    22681 tagtaagttc tttattgatg atagtaatga atcgtcgcag tgaaatagca cttttacttg
    22741 ctctaggtgc aagcaaaaat gaggtaaaaa agagtttttt tgccttaggt atgcttattg
    22801 gtggtggcgg tatgatagtg ggtgtggtac ttgcattttt tgctttatgg cttttgggaa
    22861 attttgatat tgtaacttta cctgctgatg tttatggaac cagtaaatta ccacttgatt
    22921 tgtctttaat ggatttttct ttaaccattg tgggtgcttt aataatcata gctttatcat
    22981 ctttttatcc tgcaaaaaaa gcaactcaaa ttaatatttt agatacttta agaaatgaat
    23041 aaattgtaat tttggagatt tttattgtct ttgtttactc aaaaaaataa gaattttaaa
    23101 cctttaaaac ctctatcaaa gtcaaaaata atcactaatt taattctttt gattttattt
    23161 ttaatattgt tttgttattg tagttttagt ataagtactt atcattttga ttttagcaca
    23221 attgcgacct ataaagaaaa atttcttcaa ggttttttaa atactttaat aatcagtttt
    23281 ttttctttat tgttgagtat aattttgggt ggagtttttt gtgctttttc tttaagttcg
    23341 attgtttttt taagattttt atctacattt tacatagagc ttatcagagg aaccccttta
    23401 ctagtgcagg tattattgat atattatatc attgcaaata atttaggact tgataatcga
    23461 tatgtggctg gagttattat tttatcatgt ttttctgctg cttacttagc tgaaatattt
    23521 agagctggaa ttttaagtat ttctatatct cagcttgaga gcgctagggc tttagggtta
    23581 aaagagatgc aggtttttgc gtatgtgatt tttccccaag ctttaaaaaa tattttagca
    23641 ccgctgagtg gacaatttgc aaatttaatt aaagatagtt ccttattaag cgttattgct
    23701 gtaaatgaat taacccaaag tgcgcaagag ataaattctt atacttttgc tactcttgaa
    23761 gcttatgtaa ttttggctat tacatatctt gttttgactt tacctataag tatattttct
    23821 cgttatttgg agagaaaatg ccaaaaatga tttaaaaaag cttgacaaat agagctaatt
    23881 ttggcataat cacattttta tttcagaaaa tgtctcgtta gctcagccgg tagagcatct
    23941 cccttttaag gagggggccg ttggttcgaa tccaacacgg gacaccatta ta
//
LOCUS       DAPIWB010000019        23251 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.020, whole genome shotgun sequence.
ACCESSION   DAPIWB010000019 DAPIWB010000000
VERSION     DAPIWB010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23251)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23251)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23251
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.020"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            104..1912
                     /locus_tag="RJ266_000625"
     CDS             104..1912
                     /locus_tag="RJ266_000625"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HDV7354401.1"
                     /translation="MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSC
                     AHLMAQAIKSLYPEAKFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIE
                     ILKYEITKNEALAKFQNDDLKQEVLLRIPDGAVSIYKQGEFEDLCRGPHVPNTKFLRF
                     FKLTRVAGAYLGGDEKREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKL
                     FTFDDEIGGGLPIWLSNGARLRSKLEHILYKIHRLRGYEPVRGPELLKADAWKISGHY
                     ANYKENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSG
                     VLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEMEISTKPEKA
                     IGDDEIWEVATKALKEALDEQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQV
                     DFNLPSRFKLEYTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVG
                     IVPIGEAHIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEV
                     AKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEVHF"
     gene            1909..2427
                     /locus_tag="RJ266_000626"
     CDS             1909..2427
                     /locus_tag="RJ266_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HDV7354402.1"
                     /translation="MSKEKEVLLNEEIRADEIRCVGDDGKVYGIISSDEALEIANRLG
                     LDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKIAQNDIN
                     YKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENEANRDKEPNFEG
                     RYVNMLVTPKKA"
     gene            2438..3166
                     /locus_tag="RJ266_000627"
     CDS             2438..3166
                     /locus_tag="RJ266_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HDV7354403.1"
                     /translation="MPRQALMQNKNQHLAKNQYSKSDDLNIDLAMQQTKEYLENRFAN
                     GGGVSNFIEGNYYFEIKKQIEISFMIENIKLSKIRAEFDSSFFENKIKPDGGVLFLRK
                     KDDRKFKKILLITEAKRQGTNDIRTKQGKNKQATGNAIERLGKNLTGIKAMLNHEKIT
                     PFVCFGWGCDFASDEKTVLAKLNVLNEFYYLNKTYIFKADGNSDHNYFSPVSMYFREE
                     KWEVNEMFEIMKEIAETSLRYYIF"
     gene            3178..4269
                     /locus_tag="RJ266_000628"
     CDS             3178..4269
                     /locus_tag="RJ266_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HDV7354404.1"
                     /translation="MKENLLYLKEQIITYLGNKRALLSFLNKGFKVAKKELGKDKFSF
                     CDIFSGSGIVSRFAKSHSNYILANDLEDYSRIINECYLSNLNDDLEKDIKYYYEKLLK
                     NLQLKEGFLAKLYAPKDDLNIKANERVFYTYKNACYLDSVRAKIENEIPQELKHFFIA
                     PLIYEASVHSNTSGVFKGFYKGKDGIGKFGGEAQNALKRIKGEIELKMPIFSNFSCEF
                     EVMQKDANMLAKELDFFDVVYLDPPYNQHPYSSNYFMLNLIANYKKPEEISKISGIPK
                     DWNRSTFNKPKFAQDALFELINDLKARVILLSYNCEGFVKKEIFLKRLSTLGKCRILE
                     QKYNTFRASRNLKNRNIHLHEQLYILVKN"
     gene            4309..7746
                     /locus_tag="RJ266_000629"
                     /pseudo
     CDS             4309..7746
                     /locus_tag="RJ266_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_172669436.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter serine protease VvfC"
     gene            7834..8862
                     /locus_tag="RJ266_000630"
     CDS             7834..8862
                     /locus_tag="RJ266_000630"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HDV7354405.1"
                     /translation="MKIKVGILGASGYAGNELVRILLNHPKVEISYLGSSSSVGQNYQ
                     DLYPNTPLNLCFENKNLDELELDLLFLATPHEFSAKLLNENLLKKMKIIDLSADFRLK
                     NPKDYELWYKFTHPNQDLLQNAVYGLCELYKEEIKKASLVANPGCYTTCSILSLYPLF
                     KEKIIDFNSVIIDAKSGVSGAGRSAKVENLFCEVNENIKAYGLASHRHTPEIEEHLSY
                     AAKEKITLQFTPHLVPMQRGILISAYANLKEDLQEQDIRDIYTKYYQNNKFIRLLPPQ
                     SLPQTRWVKSSNFADINFSIDQRTKRVIVLGAIDNLIKGAAGQAVQNMNLMFDFDEDE
                     GLKFFANL"
     gene            8872..9318
                     /locus_tag="RJ266_000631"
     CDS             8872..9318
                     /locus_tag="RJ266_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV7354406.1"
                     /translation="MLIRAMQKSDYEAVYKLWCEIKGFGIRSIDDSKENIENFLDRNP
                     NLSVVAVVDEEIVGSILCGHDGRIGGFYHVCVHKDHRKKGIAHEMTKFCLEALKAQKI
                     NKIALIAFKNNDLGNEFWKHYGFTLREDANYYDLSLNEYNQTSFNA"
     gene            9322..10167
                     /gene="argB"
                     /locus_tag="RJ266_000632"
     CDS             9322..10167
                     /gene="argB"
                     /locus_tag="RJ266_000632"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HDV7354407.1"
                     /translation="MIMQKYLEKANVLIEALPYIRKFNSKIILIKYGGSAMENEELKH
                     CVMQDIALLKLVGLKPIIVHGGGKDISAMCEKLGVKSEFKNGLRVSDKATIEVASMVL
                     NHINKNLVHSLQNLGVKAIGLCGKDGALLECVKKDENLAFVGTIQKVNSKILEELLEK
                     DFLPIIAPIGMDEDFNTYNINADDVACAIAKALRAEKLAFLTDTAGLYEDFSDKNSLI
                     SKISLEQAKILAPKIEGGMYVKLKSCIDACENGVKKVHILDGRVKHSLLLEFFTDEGI
                     GTLVG"
     gene            10171..11358
                     /locus_tag="RJ266_000633"
     CDS             10171..11358
                     /locus_tag="RJ266_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HDV7354408.1"
                     /translation="MKMDYKEQSHIVPTYKRFDIVLEKGQGVYLFDDKAKKYLDFSSG
                     IGVCALGYNHAKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASALERVFFTNSG
                     TESIEGAMKTARKYAFNKGIKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISG
                     VKFAKYNDISSVEKLVNEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIA
                     DEIQCGMGRSGKFFAYEHAQILPDIMTSAKALGCGLSVGAFVINQKVASNSLEAGDHG
                     STYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGF
                     MQGLSLDKSVKVAKVIQKCQENALLLISCGENDLRFLPPLILQKEHIDEMSEKLRKAL
                     KSF"
     gene            complement(11377..12006)
                     /locus_tag="RJ266_000634"
     CDS             complement(11377..12006)
                     /locus_tag="RJ266_000634"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HDV7354409.1"
                     /translation="MNAFEQKRCQNMAEEIAQKVFINEELFNAFCQIPREIFSPLKAH
                     AYRLDALPLANSQWISSPLTVAKMTMALDFKNADSILEIGCGSGYQAAILSKVIRRVF
                     TIERIENLAKKAAQTFRELELFNINVKFDDGQNGWKNYAPYDRILFSAYATQIPEILL
                     DQLSDDGILVAPILHNGKQFITRLRKNGTNLQKEILEECLFVPIVDGKE"
     gene            12095..12643
                     /locus_tag="RJ266_000635"
     CDS             12095..12643
                     /locus_tag="RJ266_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HDV7354410.1"
                     /translation="MLIKFKNHSPKLGQNVFVAEGAKIIGEIEIGDESSIWFNCVLRA
                     DVNFIKIGKRTNIQDLSTVHVWHREFDEKGKLKDAGFPTIIGDDVTIGHNCVIHACVI
                     KNRVLIGMNAVIMDNALIEEDSIVGAGSVVTKGKKFPPRSLILGNPAKFVRELNDEEV
                     SFLKQSALNYVDFKNEFLKDLQ"
     gene            complement(12612..13985)
                     /locus_tag="RJ266_000636"
     CDS             complement(12612..13985)
                     /locus_tag="RJ266_000636"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HDV7354411.1"
                     /translation="MMTSKTSLALLCDFYEFTMSQGYFKNNKKDQICYFDIFFRKIPD
                     SGSFAIFSGLEDILDFVENLSFDAEDIEFLRKQGIFDTEFLDFLANFKFKGEIYAMRE
                     GEVIFPNEPLLCIKATTIEAQLLETFLLLSLNHQSLIATKTNRIVRAAKDSKILEFGS
                     RRAQGSEAALKGARAAFIGGCIGSACTLAGKIYNIPINGTMAHSWVQMFENELEAFKA
                     YVKIYPKNPIFLIDTYDCLNSGLKNAIKVFKEFGIQEGGVRIDSGNLLELSLKIRQEL
                     DQAGLQKCKIIVSNALDEWSIKKLKEQNAPIDIFGVGERLITASSDPIFSCVYKLAAL
                     EDQGIKPKIKISENNEKSTLPHFKKLFRVYDKNTQKILFDELYVFDENPNQDENLERK
                     ELLELVYKEKRLLKKSSLNTIQDYTKEQISKLDESFLDLDRFVKFEVKLSPKLQNITE
                     DLLKTRF"
     gene            complement(13972..14994)
                     /locus_tag="RJ266_000637"
     CDS             complement(13972..14994)
                     /locus_tag="RJ266_000637"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HDV7354412.1"
                     /translation="MQRKRIYNPSSNETLGDRKIFDGNPHGILNFTKAKYTWALKLWD
                     LMEANTWFPKEVDTTKDALDYRCNLTVGEKRMYDLVWSQLISMDSFQTNNLADNINPY
                     ITAPEINAVLARQAYEEANHSKSYAVMVEAICDNTDLIYEMEKHDETLREKNDFISSI
                     YEELAGDVDDNKLLLAMVANQILEGVYFYSGFTAIYALARAGKMLGSAQMIRFIQRDE
                     ITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFTN
                     DIIEEYIHYLVDQRLSAINLDKLYNAKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS
                     ISFDDF"
     gene            complement(14997..15419)
                     /locus_tag="RJ266_000638"
     CDS             complement(14997..15419)
                     /locus_tag="RJ266_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HDV7354413.1"
                     /translation="MKTKAKISSRWLRFRALLIDIFLIYIPILYLFYFLLGSKEAFLN
                     NHFITTLCTFLFGLIQAIFLTKKAQSPGLKAYDLYLIDIKTGKKLSFLRILLRYVIFI
                     ISFGLLFGLFVSFVRKDRLNLHDILTQSCIATKSIKKG"
     gene            complement(15420..16028)
                     /gene="pyrE"
                     /locus_tag="RJ266_000639"
     CDS             complement(15420..16028)
                     /gene="pyrE"
                     /locus_tag="RJ266_000639"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HDV7354414.1"
                     /translation="MNLEQIYKDCGAYLEGHFLLSSGKHSQFYLQSAKVLENPKLAAK
                     LCDELAKIITSYKIEFDSICSPALGGILAGYELARACSKRFIFTERVNKEMTLRRGFE
                     VKKGEKFIICEDIITTGGSALESAKIIESLGGIVVGFAALANRGFCAVENLKSPRKDN
                     AKLPENLPLFTLGNFEFEIYNETNCPLCKKGSKAIKPGSRGN"
     gene            complement(16031..16594)
                     /gene="frr"
                     /locus_tag="RJ266_000640"
     CDS             complement(16031..16594)
                     /gene="frr"
                     /locus_tag="RJ266_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HDV7354415.1"
                     /translation="MIMLNEIFNKQKTQSEKSLEALKKDFTTLRTGKVNTHILDHITV
                     DYYGTQTPLNQVATVLASDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKL
                     FFPPMTREQREENVKQAKAMGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYD
                     EVQKLTDAYTTKIDESVKSKESELLKV"
     gene            complement(16604..16975)
                     /gene="secG"
                     /locus_tag="RJ266_000641"
     CDS             complement(16604..16975)
                     /gene="secG"
                     /locus_tag="RJ266_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HDV7354416.1"
                     /translation="MITLLIILQFIIVVVICIAVLLQKSSSIGLGAYSGSNESLFGAK
                     GPAGFLAQFTFVMGILLIANTIGLGYLYNKASKDSLAEKIKVENNNTTIPSAPIVPAT
                     PNTNSIAPSAPQLPSDVNSSK"
     gene            complement(17079..17774)
                     /locus_tag="RJ266_000642"
     CDS             complement(17079..17774)
                     /locus_tag="RJ266_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HDV7354417.1"
                     /translation="MSLYDRDYSRSKEFENTRSSELSIFIKQTYQLFAASLLAATVGA
                     YVGIFALASFFIQSQVTFWILFAVEIGLLFALQWKKREAPLNLVLLFGFTFCSGLTLT
                     PLLISVLALPAGGIIIAQAFALTTVAFAGLSVFAMNTKKDFTVMGKALFIVLIVIVAA
                     SLLNLFFQSSIVNLAISAVAAILFSFYILYDTQNIIRGNYKTPIEGAVALYLDFVNLF
                     VSLLNILRSFNSR"
     gene            17934..18569
                     /locus_tag="RJ266_000643"
     CDS             17934..18569
                     /locus_tag="RJ266_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HDV7354418.1"
                     /translation="MENLISGAIKFMQEDFKEHEELFESLKNKQNPHTLFIGCSDSRV
                     IPNLITNTGPGELFVIRNIANIVPPYRIGEDYLATTSAIEYALNSLHIKNIVVCGHSN
                     CGGCNALYYSDEELNKIPNVKKWLTMLDPIKKDVMIFARDDLAMRSWLTEKLNLVNSL
                     QNILTYPGVQEALDEGKIEVHAWYYIIETGEIYEYDFKAKIFTLIQDRKVQ"
     gene            18566..20449
                     /locus_tag="RJ266_000644"
     CDS             18566..20449
                     /locus_tag="RJ266_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HDV7354419.1"
                     /translation="MKKIIFSLCFFILYLGAQEFKFIDANISKEDEGIYALVEKYVDL
                     NNQIKEFKKNNDENSSTFNGILSEFEKDKKTILAKIPDMIVGQKINEEAVARFLKAKE
                     KLLDVQKKNINKPYIYTDATLNLVYFNIVESFYSSLFEVEKLFKNTASSEDLIATVDK
                     AMENLQNSSNVNLDSFKSKITNSEELEKITLKERYISNAVDSYSEILKYLRSNADLLE
                     SNYIFSLLELQVWIDRINEAIGVSFVNIGKIVISALVLVFFISLRRFFANIVYFFLVQ
                     FFYRNKNDVDDIKVIFIENIKKPVGFLLIVYAISLCLTIATYPAPLSVNLSNFFHIVY
                     AVLIAWLILRMLDGYGVVLVSKLAQKSGKKEVVNLIIKILYFVIIIIALLYILAQLGF
                     NISAIIASLGIGGLAVALAAKDIIANFFASILLLFDNSFNQGDWVEVSGIEGTVVETG
                     LRKTTIRTFDNCLVFLPNSTIMGANIKNWSKRRMGRHVRMYLGVGYDATPEKLEQCVK
                     DLREFLHTSDLVAHDEDSALKYGDHTTKYRQNLVSINDLEGYKNACYVALSEFADSSI
                     NIELYFYIKEIGGKDFREARQSLMLEFMRIIEKNGLTFAFPSRSIYIENLPPLDLQAK
                     AIK"
     gene            complement(20472..21443)
                     /locus_tag="RJ266_000645"
     CDS             complement(20472..21443)
                     /locus_tag="RJ266_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly scaffold protein
                     NifU"
                     /protein_id="HDV7354420.1"
                     /translation="MGKNSLIGGSIWDEYSQKVQDRMNNPQHMGEFSEEDAKARNAKL
                     IVADFGAESCGDAVRLFWLVDEKTDKIIDAKFKSFGCGTAIASSDTMVDLCIGKTVDE
                     AVKITNLDVEFAMRDNPETPAVPPQKMHCSVMAYDVIKQAAAHYKGISPEDFEDQIIV
                     CECARVSLGTIKEVIKLNDLHSVEEITQYTKAGAFCKSCIKPGGHEKRDYYLVDILAE
                     TRAEIDREKLKNTMKSDVAFDEMTVVGQLKAVESVLDAEIRPMLHNDGGDLEVIDIQK
                     AEGAAIDVYIRYLGACSGCSSGSGATLYAIETILQEELSPNIRVMPV"
     gene            complement(21453..22634)
                     /locus_tag="RJ266_000646"
     CDS             complement(21453..22634)
                     /locus_tag="RJ266_000646"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifS family cysteine desulfurase"
                     /protein_id="HDV7354421.1"
                     /translation="MKVYLDNNATTMLDPNAYELMLPFLKDIYGNPNSLHQYGSATHP
                     ALREALDKLYAGLGANDLDDIVITSCATESINWVLKGVYFDYILDKERNEVIISSVEH
                     PAVTAAAYFLKSLGVKVIELPVNEEGVSTVEDLRKVISDKTALVSVMWANNETGMIFD
                     IKAMAELAHEFGALFHTDATQAVGKIKVNLTQVGVDFASFSAHKFHGPKGVGGLFIKK
                     GLKLTPLLHGGEHMGGRRSGTLNVPYIVAMGEALRIANTMLDFEDSHIRRLRDKLEDQ
                     ILALPDTTVVGKREHRVPNTILASIKGVEGEAMLWDLNKNGIAASTGSACASEALESN
                     PIMEAIGAEHDLAHTALRLSLSRFNTEEEIDYAAKQIKNATQRLRAISCTYAYNPNNY
                     K"
     gene            complement(22812..23213)
                     /locus_tag="RJ266_000647"
     CDS             complement(22812..23213)
                     /locus_tag="RJ266_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HDV7354422.1"
                     /translation="MIYNEKIISMNNDLLDHQHKELFEISKKLSLMNQCHVGTKELKI
                     VLRELLIMINRHFSDEEAFMRKIEYPYINHHTRIHRKIILEIEEIIISEAKFVNIMTE
                     KLNLVVQDFIFKHTAKEDSKIVKYYEEKFKK"
BASE COUNT         8143 a         3144 c         3999 g         7965 t
ORIGIN      
        1 ttttaaaaat aagctgaatt tcaaaaataa ttaagtctta gaaagttaaa attagaactt
       61 tataaacact cacagggtaa gtgagcgaca aagggttaaa aatatggaaa aagaagttat
      121 tgcgtatttg gacaatgaga caataattga ctctcaaagt gtgaaaaata caaatttaaa
      181 agaaatttat tttgataatt ctaaagaaag cttagaagta atccgtcatt cttgtgcgca
      241 tttaatggca caggcgatta agagtttgta tcctgaagct aaatttttcg ttggtcctgt
      301 tatagaagat ggattttatt atgattttcg tgtagaaagt aagatcggcg aagaagattt
      361 agtaaaaatt gaaaaaaaga tgaaagaact tgctgaagca aagattgaaa ttttaaaata
      421 tgaaatcaca aaaaacgaag ctttggctaa atttcaaaat gatgatttaa aacaagaagt
      481 tttattgcgt attcctgatg gagctgtaag tatttataag caaggtgaat ttgaagattt
      541 gtgtcgtggt cctcatgtgc caaatacgaa atttttacgc ttttttaaac tcactcgtgt
      601 tgcaggagcg tatttgggtg gtgatgaaaa aagagaaatg cttactcgaa tttatgggac
      661 tgcttttgca gataaggaaa gtttaaaaga gtatttaacc attatcgaag aagctaaaaa
      721 acgcgatcat agaaagcttg gaacagagct taaacttttt acttttgatg atgagatcgg
      781 aggtggtctt cctatctggt taagtaatgg tgcaagactt agatctaaac ttgaacatat
      841 actttataag atccatcgtt tgcgtggtta tgagcctgtg cgtgggcctg agcttttaaa
      901 agcagatgca tggaaaatca gtgggcatta tgcaaactat aaagaaaata tgtattttac
      961 acaaattgat gaacaagaat atggtattaa gcctatgaac tgtgtggggc atattaaaat
     1021 ttatcaaagt gatgtaagaa gttatcgtga tttgcctttg aaattttttg aatatggcgt
     1081 ggtgcatcgt catgaaaaaa gtggggtttt gcacggactt tttagagtga gagaattcac
     1141 tcaagatgat gcacatattt tttgtatgcc aagtcagatt aaagagcagg ttttagaaat
     1201 tttagctttt gtggataatt tgatgaaatt atttgatttt agctatgaga tggaaatttc
     1261 aactaaacct gaaaaagcca taggtgatga tgaaatttgg gaagtggcaa ctaaggcttt
     1321 aaaagaagct ttagatgaac aaggtttaaa atatggcatt gatgaaggtg gcggggcttt
     1381 ttatgggcca aagatcgata ttaaaatcac cgatgcctta aaaagaaagt ggcaatgtgg
     1441 aactatacaa gtagatttta acctaccaag tcgttttaaa ctcgaatata ctgatagtga
     1501 taatgaaaaa aaacaacctg taatgttgca tcgtgcgatt ttaggttctt ttgaaagatt
     1561 tataggaatt ttaaccgagc attgtgcggg tgagtttcca ttttttatcg caccaactgc
     1621 ggtgggtata gtgccaatag gcgaagcaca tattgcttac gcaaaagaaa ttcaaaaaga
     1681 attattagag cttaatatcg atagcgaggt gtatgaaaaa aatgagagct taagtaaaaa
     1741 aattcgtatt gctgaaaagc aaaaattacc tatgatttta gttttaggcg atgatgaggt
     1801 ggcaaagcgt agcgttgctt taagagatag aagagctaaa gaacaaaaaa atcttagctt
     1861 ggacgaattt attaaattag ttaaggagaa aatgagtgag gtacactttt gagtaaagaa
     1921 aaagaagtat tgctcaatga agaaataaga gcggatgaaa tcagatgtgt tggcgatgat
     1981 ggcaaagttt atggtattat cagtagtgat gaagctttag aaattgcaaa tcgtttagga
     2041 cttgatcttg taatgatagc tgcagatgct aagccacctg tttgcaagat catggactat
     2101 ggtaaattcc gttatcaaca agagaaaaaa caaaaagaag caaagaaaaa acaaaaagtg
     2161 attgatataa aagaaatcaa actttctgta aaaattgctc aaaatgatat taattacaag
     2221 gtaaaacatg ctttagaatt tttagaacaa ggtaagcatg tgagatttcg tgtgttctta
     2281 aaaggacgtg aaatggcaac tcctgaagca ggtgtagctt tgcttgaaaa aatttggact
     2341 atgatagaaa atgaagctaa tcgtgacaaa gagccaaatt ttgaaggtcg ttatgtaaat
     2401 atgcttgtaa ctcctaaaaa ggcttaatgg agtttttatg ccaagacaag ctttaatgca
     2461 aaataaaaac caacacttag ctaaaaatca atattctaaa tctgatgatt tgaatattga
     2521 tttagctatg cagcaaacaa aagagtattt agaaaatagg tttgcaaatg ggggaggggt
     2581 aagtaatttt atagaaggaa attactattt tgaaattaaa aaacaaatag aaatttcttt
     2641 tatgattgaa aatataaaat taagcaagat tagagctgag tttgatagta gtttttttga
     2701 aaataaaatt aagcctgatg gtggagtttt atttttaaga aaaaaagatg atagaaaatt
     2761 taaaaaaata ttattaataa cagaagctaa acgacaaggc acaaatgata ttcgtacaaa
     2821 gcaaggtaaa aataagcaag caacaggtaa tgcaatagaa agactaggaa aaaacttaac
     2881 tggaataaaa gctatgttaa atcacgagaa aataacacct tttgtttgtt ttggctgggg
     2941 ttgtgatttt gctagtgatg aaaaaacggt tttggctaaa ttaaatgttt taaatgagtt
     3001 ttattatctt aataaaacct atatttttaa agctgatgga aatagcgacc ataattattt
     3061 ttcacctgtt agtatgtatt ttagagaaga aaaatgggaa gttaatgaaa tgtttgaaat
     3121 aatgaaagaa atcgcagaaa cttctttaag atattatatt ttttaatgga aaagattatg
     3181 aaagaaaact tgctttattt aaaagaacaa attataactt atcttggaaa taaaagagca
     3241 cttttaagtt ttttaaataa gggctttaag gtagctaaaa aagaacttgg taaagataaa
     3301 tttagttttt gtgatatatt tagtggctca ggtattgtaa gtcgctttgc aaaatcgcat
     3361 tcaaattata ttctagcaaa tgatttagaa gattattcaa gaataataaa tgagtgctat
     3421 ttgagtaatt taaatgatga tttagaaaaa gatattaaat attattatga aaaattgtta
     3481 aaaaatttac agcttaaaga aggtttttta gctaagcttt atgccccaaa agatgattta
     3541 aatataaaag caaatgaaag ggttttttat acatacaaaa acgcttgtta tttagatagt
     3601 gttagagcaa aaattgaaaa tgaaattcca caagaattaa aacatttttt tatagcacct
     3661 ttaatttatg aagctagtgt gcattcaaat actagtggag tttttaaagg tttttataag
     3721 ggtaaggatg gtatcggaaa atttggagga gaagcgcaaa atgcacttaa acgcattaaa
     3781 ggagaaatag agcttaaaat gcctattttt tcaaattttt cttgtgaatt tgaagtaatg
     3841 caaaaggatg caaacatgct tgcaaaagaa cttgattttt ttgatgtggt gtatcttgac
     3901 cccccttata atcagcaccc ttatagttct aattatttta tgctaaattt aatcgcaaat
     3961 tataaaaaac ctgaagaaat ttctaaaatc agtggcattc caaaagattg gaaccgcagt
     4021 acttttaata agccaaaatt tgcccaagat gctttatttg aacttattaa tgatttaaaa
     4081 gcaagagtga ttttactttc ttataattgt gaaggttttg taaaaaaaga aattttttta
     4141 aagcgtttaa gtactcttgg aaaatgtcgg attttagaac aaaaatataa tacttttaga
     4201 gcttctcgca atcttaaaaa tcgcaatatc catcttcatg aacaacttta tattttagtt
     4261 aaaaattaaa ttttgtgcta aaattatatt tataaaaagg agggatttat gaaactaaaa
     4321 ttatcttttt gtgcattaat ggcattcggt ttttctaact atctttttgc ttcggccatt
     4381 gatccaaagt tttattttca agaatatctt gattttgcta gtaataaagg caaatttcaa
     4441 gtaggtcaaa ttggctttta aattttagca aaaaatccta gtcaaaatat ctcttttaat
     4501 gtgcctatga ttgatttttc tacttcaaat cgtggaggaa aattccaagg agaatttacc
     4561 aatataggac aatcttatat agtcagtgct tctcatatga gtacaagttt aaatactggg
     4621 aagtaaataa aggctatgtg aaacaaggta gtgttttaca ctttggaggg gtagcaaata
     4681 gaatcgtaag ctcaagtgat aattttattt ataaaaaaga aaatgtggat tttactgttt
     4741 taaaaatgag taagattagt ctcaataaaa gtgcaaattt aagtaaagat ttaaatctta
     4801 ttgaaaaaga ttctggcgat ggtggagata tttatgaata caaggatcca ttttgggata
     4861 gttgccaaag tggaataaaa agtaaaggca agctttttga tagttcgcgt tatgagtact
     4921 ttgcaagaga gggaagtggt attgtagctt taggttttga agatacaaat aaagtaccca
     4981 ttaagatttt tgattctaat gaaatcaatt taggaggttt tgtcagttta actcctaaaa
     5041 atactgaaga taagcgtttt aagttgcaat ttcttaatta taccaatgat aaaagaaatt
     5101 cttttacaag ttcttcaata tcctgggatt ctggaagtgg agtttatgtt tatgataaga
     5161 tggataaaaa tggtatttag tgggtgtggt aggtacgagt aattgtaatg tccattttac
     5221 tatggatata cttgtttaca ggttgattat gctttgatca atcaagtaaa gatcaatgaa
     5281 ttttaaaatg ctcataaagt agtcatagga tctggaactt atacacttag tagcgatggt
     5341 ttggtgaaag atggtaaaaa aatagaagat gtaagtttga tttctaagac taatgtgggt
     5401 tatgtaagct ataaaaattc ttttgatgat aaaaataatt gtgataagag aattgaagaa
     5461 atgcaaaata gcaaggattt gtatttttct caaaatggaa gtataaattt aaatagcgat
     5521 gtggatttag gcgctagtgt tttaaatttg ataaaaattc aaattggcaa ataacaggcg
     5581 ataaatggct tatacatggt ggaatttatg ctgataaggg ttcaagtgta gaatataatg
     5641 ttaaaaccaa aaaagatgat tttctttata aaatgggtga aggagagctt gttgtcaaaa
     5701 gtcaaagtgt ggatacagga cttagaatgg gtgaggacca aggtaagtct tgagggtgaa
     5761 ggtttaagtt ttggcgaaat ttatatgaat ggcagaactt tggatttatc aggcttaaca
     5821 ttaaattttg atcaaattaa agccaattct aataatgttt ttatcacaag ttcttaatca
     5881 ggaatacatt taaatttaga aaacaagcaa gattatcttt atcatggcaa tatcttttca
     5941 gatgaagctg taacaatgag tgccaataca gacaaagctt tgattttgat ggtaatattt
     6001 acaataaaga aggtgttttt aggacagaaa atgccaagtt aaattttcaa ggacatgcta
     6061 gaatacacgc ttatgtaagc aaagaacaag ctaaaaaact tcaagaacat ggtttaagtg
     6121 ctttaactaa gcctgtaagt tttacacaag aagattgggt ttttgtttta aaagagctta
     6181 atttagaaaa aaagcgagtt ttatttaggg cgttaatgta agcttaaaag tagaaaacct
     6241 taatgctaaa aattccaaaa tagagcttgg aagtaaaaat ttgcggatcg atgaaaaaga
     6301 tggggaaaat attattgata agactgatga ttattcttat ggagatgttg tataaacagg
     6361 agttggcaaa gaaatggctt ttgagcaaaa gctttaaaat acccaaaatg ctaagataga
     6421 aaaggtttat tttagtgtaa atttaaatct tgatcattct gatgttactt tgcaaaacac
     6481 attttttagt agtaatatca aaggtatcaa tgatacgcaa aaaaatcttg cgattaaaga
     6541 ttctttgctt gagtctcata tacaaatgag caatcttcaa gtagaaaaaa gtgctattta
     6601 taggaaagtt gatgcaaaaa aattaagtgc aaataataca atatttaaaa tcaatgtgga
     6661 ttttgaaaat tctaaagcag attatattaa ttctaaggaa agcacacaag gagtaaataa
     6721 tactttagta ttaatttttc ttaataatcc tagcaaaaag cgggtttaaa tatcttacta
     6781 gctcatttaa aagatgaaaa taaacattta acaaaggaat ttttcactat accaaatgtg
     6841 agcaaggttt tagtacgtat accccaaatg ttgttttttc tcataatgag gaaaattttg
     6901 cccagagtgg aatttagaaa aaattgattc taagattaaa gatgaatatt tttttactaa
     6961 tgataatact caagctattg taaaaactaa atctatactt gctcaagcta ttttaggctc
     7021 catgatagga gtggaataat atgcataaaa gaatggggga attacgcaat aatccttatg
     7081 aaagtggtgt atggttaaga acttttggat ggggtacgag tgatgagtat aatagtggaa
     7141 aatactttga aattcaaagc ggacatgata aattaaacga gtattcgaat ttcgagcttt
     7201 acagtggaat aaggttttta tagtgatttt gttttagata tatttattat caaaatgaaa
     7261 taaatgcaaa ttttattcca ggaaatcaag gtagattaga tgataatgat ggttcgcata
     7321 atattatctt aagtgctgag ttaggttata gaaaagctta tgataaattt tatcttgagc
     7381 cgatttggaa tttatcagtg gttatgtagg agctatggat ctaaaaggag atattgctag
     7441 tttaaaacga ttttcttata ttcctttagt cgtaaaaaca gcatttttta taggaagtca
     7501 aaattaaaat ttaaatttta gaacaggact tggtttgtat gcggatccga ttaaagcagg
     7561 agatcaaatc ttggaggatc aagcaagtca gagaagatat gaaggaaaaa agatcaaaga
     7621 atgtttataa atttaggaaa tgattataag cttaacgata aaacacgctt tagttttgaa
     7681 tttgaaaaga cattttttgg cgatttaaat gtagattgga gtgcaaatgc taattttaag
     7741 atatagtttt taaataaaaa ataatttaaa aattgtattt ttattttaag cttttttgtt
     7801 tataatactt gcttttacat ttaaaggata aagatgaaaa taaaagttgg gattttagga
     7861 gcgagtggtt atgcaggcaa tgagcttgta cgcattttgc ttaatcatcc caaagttgaa
     7921 atttcttatt taggttcgag ttctagcgtg gggcaaaatt atcaagatct ttatcctaat
     7981 acccctttaa atttatgttt tgaaaacaaa aatttagatg aacttgagct tgatcttttg
     8041 tttttggcta ctccgcatga atttagtgct aagcttttaa atgagaattt attaaaaaag
     8101 atgaaaatca ttgatttaag tgcggatttt cgtcttaaaa atcctaaaga ttacgagctt
     8161 tggtataaat tcactcatcc taatcaagat cttttgcaaa atgcagttta tggactttgc
     8221 gagctttata aagaagagat aaaaaaagca agtttggtgg caaatccagg ttgctatacc
     8281 acctgttcta tcttaagtct ttatccgctt tttaaagaaa agatcattga ttttaactca
     8341 gttatcattg atgcaaaaag tggagtaagt ggagcaggaa gaagtgctaa ggtggaaaat
     8401 cttttttgtg aagttaatga aaatatcaaa gcttatggtt tagcttcgca ccgccatact
     8461 cctgaaattg aagagcattt aagctatgcg gccaaagaga aaatcactct acaatttacc
     8521 cctcatcttg tgcctatgca aagaggaatt ttaatcagtg cttatgcaaa tttaaaagag
     8581 gacttgcaag aacaagatat acgcgatatt tatacaaaat actatcaaaa caataaattc
     8641 ataaggcttt taccgccgca gtcgcttccg cagactcggt gggttaaatc aagcaatttt
     8701 gcggatataa attttagtat agatcaacgc acaaagcgtg ttattgtgct tggtgctatt
     8761 gataatttaa tcaaaggtgc agcaggacaa gctgttcaaa atatgaattt aatgtttgat
     8821 tttgatgaag atgaaggact taaattcttt gcaaatttgt aaaggataaa aatgttaata
     8881 cgagctatgc aaaaaagcga ttatgaagcc gtttataagc tttggtgtga gataaaaggc
     8941 tttgggataa gaagcattga tgatagcaaa gaaaatatag aaaatttttt agatagaaac
     9001 ccaaatctta gcgttgtagc agtggttgat gaagaaattg taggaagtat actttgcggg
     9061 catgatggac gcataggagg attttatcat gtatgtgtac ataaagatca tagaaaaaag
     9121 ggtatagcac acgagatgac taaattttgt cttgaggctt taaaagctca aaagattaat
     9181 aaaatcgcct taatcgcttt taaaaacaat gatttaggca atgagttttg gaaacattat
     9241 ggttttactt taagagagga tgcgaattat tacgatcttt ctttaaatga gtataatcaa
     9301 actagcttta atgcttaagg aatgatcatg caaaaatatt tagaaaaagc taatgtctta
     9361 atcgaagctt tgccttatat acgcaaattt aattctaaga ttatacttat aaaatacggc
     9421 ggatcagcta tggaaaatga agagctaaag cattgtgtga tgcaagatat agctctttta
     9481 aaactcgtgg gtttaaagcc tattattgta catggtgggg gaaaagatat ttctgctatg
     9541 tgtgaaaaat taggcgtaaa gagtgagttt aaaaacggtc ttagggttag tgataaagcc
     9601 actattgaag tggccagcat ggttttaaat catatcaata aaaatttagt ccatagtttg
     9661 caaaatttag gagttaaagc catagggctt tgtggtaaag atggcgcgct tttagaatgt
     9721 gtgaaaaaag atgaaaattt agcttttgtt ggcacgatac aaaaggtaaa ttcgaaaatt
     9781 ttagaagagc ttttagagaa agatttttta cctatcattg ctcctattgg catggatgag
     9841 gattttaata cttataatat taacgctgat gacgtagctt gtgcgatcgc caaggcttta
     9901 agggctgaaa aacttgcttt tttaactgat actgcaggac tttatgagga ttttagtgat
     9961 aaaaattctt tgatttctaa aattagcctt gaacaagcta aaattttagc tcctaaaata
    10021 gaaggcggta tgtatgtaaa attaaaatcc tgtattgatg cttgtgaaaa tggagtcaaa
    10081 aaggtgcata ttttagatgg acgcgtgaag cattctttat tgcttgagtt ttttactgat
    10141 gaaggtatag gcactttggt gggttaaagg atgaaaatgg attataaaga acaaagtcat
    10201 attgtcccta cttataagcg ttttgatata gttttagaaa aagggcaggg ggtttatctt
    10261 tttgatgata aggctaaaaa atatcttgat ttttcaagtg gtataggtgt ttgtgcttta
    10321 ggatataatc atgctaaatt taatgctaaa atcaaagctc aagtggataa acttttacat
    10381 actagcaatt tatattataa tgaaaacata gccgctgcag ctaaaaattt agccaaagct
    10441 agtgctttag agcgtgtttt ttttacaaat tctggtacag aaagtataga aggagcgatg
    10501 aaaacagcta gaaaatacgc ctttaacaaa ggtattaagg gtggacaatt tatcgctttt
    10561 aagcattctt ttcatgggcg tactttaggg gctttatcgc ttactgctaa tgaaaaatat
    10621 caaaagcctt ttaaaccttt aatttcaggg gttaaatttg caaaatataa tgatatttca
    10681 agcgttgaaa aattggtgaa tgaaaaaact tgcgctatta tcttagaaag cgtgcaagga
    10741 gaaggtggga taaatcctgc aaataaagat ttttacaaag ccttaagaaa gctttgcgat
    10801 gaaaaagata tattattaat cgctgatgaa attcaatgtg gcatgggtag aagtggaaaa
    10861 ttttttgcct atgagcacgc acaaattttg cctgatatca tgacttcagc taaggcctta
    10921 ggttgtgggc ttagtgtggg tgcttttgta ataaatcaaa aggtagcaag caattcttta
    10981 gaagcaggcg atcatggtag tacttatggt ggaaatcctt tagtttgtgc aggagtgaat
    11041 gcagtttttg aaatttttaa agaagaaaaa attttagaaa atgtcaataa actcacgcct
    11101 tatttagagc aaagtttaga tgagttgata aatgaatttg atttttgtaa aaaacgcaaa
    11161 ggcttagggt ttatgcaagg gctgagtctt gataaaagtg taaaagtagc taaggtcatt
    11221 caaaaatgtc aagaaaatgc acttttatta ataagttgcg gggagaatga tttgagattt
    11281 ttacctcctt tgattttaca aaaagaacat attgatgaaa tgagtgaaaa gttaagaaag
    11341 gctctaaaga gtttttaata aattttgtaa aaaaatttat tcttttccat ctactatagg
    11401 cacaaataaa cattcttcta aaatttcttt ttgtaaattt gtgccatttt ttctaaggcg
    11461 tgtgatgaat tgtttgccat tgtgtaaaat aggagcgact aaaataccgt catcgcttaa
    11521 ttgatcaagt aaaatttcag gaatttgtgt cgcataagca gaaaataaaa tcctatcata
    11581 aggagcataa tttttccagc cattttgtcc atcatcaaat tttacattga tattaaaaag
    11641 ttctaattct ctgaaagttt gagcggcttt tttggctaaa ttttctatgc gttctatggt
    11701 aaaaacacgc cttatgactt tgcttaaaat cgcagcttga tagccacttc cacaacctat
    11761 ctctaaaata ctatcagcat ttttaaaatc taaagccata gtcattttag ctacagttaa
    11821 aggtgaacta atccattgag aatttgctaa aggcaaagca tcaaggcgat aagcatgggc
    11881 ttttaaagga gaaaaaattt cacgtggaat ttgacaaaaa gcattaaaaa gttcttcatt
    11941 gataaaaact ttttgtgcaa tttcttcagc catattttga catctttttt gttcaaatgc
    12001 gttcattact tctcctataa atttaaataa aaattgtaac taaaaaagtt gaaatagagt
    12061 taaacttagc tatacttaaa taaaaaggaa aaaaatgctt ataaaattta aaaatcatag
    12121 tcccaaacta ggtcaaaatg tttttgttgc agagggcgct aaaatcatag gagaaataga
    12181 aataggagat gaaagtagta tttggtttaa ttgtgtttta agagccgatg ttaattttat
    12241 aaaaattggc aaaagaacca atattcaaga tcttagcaca gttcatgttt ggcataggga
    12301 atttgatgaa aaaggaaagt taaaagatgc tggttttcct acaataatag gagatgatgt
    12361 aactatagga cataattgcg ttatccatgc ttgtgtgata aaaaatcgtg ttttaatcgg
    12421 aatgaatgct gttatcatgg ataatgcttt gatagaagaa gatagcatag tgggtgctgg
    12481 aagcgttgta acaaagggta aaaaatttcc gccacgctct ttgatacttg gaaatcctgc
    12541 aaaatttgtg cgtgaattaa acgatgaaga agtcagcttt ctaaaacaat ccgctttaaa
    12601 ttatgtggat tttaaaaacg agtttttaaa agatcttcag tgatattttg aagtttaggc
    12661 gagagtttta cttcaaattt cacaaaacga tcaagatcta aaaaactctc atcgagtttt
    12721 gaaatttgct cttttgtata atcttgaata gtatttaaag atgacttttt aagaagtctt
    12781 ttttctttgt agactaattc taaaagttct ttgcgttcta aattttcatc ttgatttggg
    12841 ttttcgtcaa aaacataaag ttcatcaaaa aggatttttt gcgtgttttt atcataaact
    12901 ctaaaaagct ttttaaaatg aggtagggtt gatttttcgt tattttcgct gattttgatt
    12961 ttaggtttta tgccttgatc ttctaaggct gcgagtttat aaacgcaact aaaaataggg
    13021 tcacttgaag cagtgatcaa tctttcacct acaccaaaga tatcaatagg tgcattttgt
    13081 tctttgagtt ttttaatgct ccattcatca agtgcgttag aaactatgat tttacatttt
    13141 tgaagtcctg cttgatcaag ctcttgtctg attttcaaac tcaactcaag taaatttcca
    13201 gaatctattc tcacgccgcc ttcttgaata ccaaattctt taaaaacttt aatcgcattt
    13261 ttaagtccgc tatttagaca atcataagta tcaatcaaaa aaataggatt ttttggataa
    13321 attttcacat aagctttaaa agcttcaagt tcattttcaa acatttgcac ccaagaatgt
    13381 gccatagttc cattgatagg gatattataa atttttcctg ctaaagtaca agcacttcct
    13441 atgcaacctc ctataaaagc tgctcttgct ccttttaagg ctgcttcact tccttgtgct
    13501 ctgcgtgaac caaattctaa aattttactg tctttagctg cacgcacgat acgattggtt
    13561 ttggtagcaa taaggctttg gtggtttaaa cttaaaagta aaaaagtttc taaaagctgt
    13621 gcttctatgg ttgtagcttt aatacatagc aaaggttcgt ttggaaaaat cacttctcct
    13681 tcacgcatag cataaatttc acccttaaat ttaaagttag ctaaaaaatc taaaaattct
    13741 gtatcaaaaa taccttgttt tcttaaaaat tctatatctt ctgcatcaaa actcaaattt
    13801 tcaacaaagt ctaaaatatc ttcaagacct gaaaaaatag caaaagatcc tgaatctgga
    13861 atttttctaa aaaatatatc aaaataacaa atttgatctt ttttattgtt tttgaaatag
    13921 ccttgagaca ttgtaaattc ataaaaatca caaagcaagg ctaaagaagt tttagaagtc
    13981 atcaaagctt atactaccct tagaataatt cgttacttta ctttcaaaga aattgctctt
    14041 ttgatcgtta aattttgaaa aatcatctac ccatttaata ggatgttttg cattgtataa
    14101 cttatctaaa ttgatcgcgc ttaatctttg atctacaaga taatggatat attcttctat
    14161 gatatcatta gtaaagccca tgatttgatt ttgagtgatg tatttacccc atttgatctc
    14221 aagatctcca gcttttttaa acatatcata aattttattg atattttcat catggaacaa
    14281 atcaggtctt tctttgcgta ctgaattgat catattttga aataataaaa gatgtgtgat
    14341 ttcatctctt tggataaagc ggatcatttg tgctgaacct agcatttttc ctgcacgtgc
    14401 aagtgcgtaa atagcagtaa aaccactata aaaatatact ccttctaaaa tttgatttgc
    14461 taccatagcc aaaagaagtt tattatcatc tacatcgcct gctaattctt cataaatgct
    14521 tgaaataaag tcattttttt cacgcaaagt ttcatcatgc ttttccattt cataaatcaa
    14581 atctgtatta tcgcaaatcg cttctaccat aacagcgtaa gattttgaat ggtttgcttc
    14641 ttcataagct tggcgtgcca aaaccgcatt gatttcagga gctgtgatgt aagggttgat
    14701 attatctgct aaattattgg tttgaaaact atccatagaa ataagctgac tccaaaccaa
    14761 atcatacatt cttttttcac ctacagttaa attacagcga taatcaagtg catctttagt
    14821 tgtatccact tcttttggaa accaagtatt tgcctccatt aaatcccaaa gttttaaagc
    14881 ccaggtatat tttgccttag tgaaatttaa aattccatgt gggttaccat caaaaatttt
    14941 acgatctcct agggtttcgt ttgagcttgg attgtaaatt ctttttcttt gcatttttaa
    15001 cctttcttta tgcttttagt agctatacaa ctttgagtta aaatatcgtg taaatttaaa
    15061 cgatcttttc ttacaaaact gacaaataaa ccaaagagta agccaaaact tataataaat
    15121 atcacatatc ttagtaaaat tctaagaaaa cttagtttct ttcccgtttt tatatcaata
    15181 agatataaat catatgcttt aagacctggg ctttgtgcct tttttgttaa aaaaatagct
    15241 tgaatcaagc caaataaaaa agtacataaa gttgtgataa aatggttgtt taaaaaagct
    15301 tctttagagc ctaatagaaa ataaaataaa tacaaaatag gaatataaat aagaaaaata
    15361 tctataagca aagctctaaa tcttagccat ctagagctaa tttttgcttt agttttcatt
    15421 taatttccac gacttcctgg ttttatagct ttactccctt ttttacaaag tggacaattt
    15481 gtttcattat aaatttcaaa ttcaaaattt cctagagtaa agagtggtaa attttcaggt
    15541 aatttcgcat tatcttttct tggagatttt aaattttcta ctgcacaaaa accacgattt
    15601 gccaatgctg caaaacctac aacaatacca cctaaacttt caatgatttt tgcactctct
    15661 aaagcactac cacctgtagt aatgatatct tcacaaatta taaatttttc accctttttc
    15721 acctcaaaac cacgtcttaa agtcatttct ttatttactc tttcagtgaa gataaaacgt
    15781 ttactacaag ctctcgcaag ctcataacct gctaaaattc cacctaaagc aggagaacaa
    15841 atgctatcaa attctatctt atagcttgta ataatctttg caagttcatc acaaagtttt
    15901 gctgctaatt ttggattctc taaaactttt gcactttgaa gataaaattg cgaatgttta
    15961 cctgaactta gtaaaaaatg gccttctaaa taagcaccac aatctttata aatttgctct
    16021 aaattcatcg ttaaaccttt aaaagttcac tttctttact ttttacactc tcatcaattt
    16081 ttgttgtata ggcgtcggta agtttttgca cttcatcata agcttttttt gcttcatctt
    16141 cgcttattgc cttatctttt tctagttttt taactgcatc attggcatct ttgcgtatat
    16201 ttcttataga aacttttgcc ttttcaccca tagctttagc ttgctttacg ttttcttctc
    16261 tttgctctct agtcatcgga gggaaaaata attttacact ttcgccgtca ttgtttggat
    16321 ttacaccgat atttgcagct gcaatagcgc tttctatggt ttttagtaaa ggtttttccc
    16381 aaggagtgat gctaatagtt gaagcatcac ttgctaaaac agttgctact tgatttaaag
    16441 gagtttgagt tccataataa tccactgtaa tatgatctaa aatatgggta ttaacttttc
    16501 cagttcttaa agtggtgaag tcttttttta aggcttctaa agatttttca ctttgggttt
    16561 tttgtttgtt aaaaatttca tttagcatta tcatttcctt taattattta cttgaattaa
    16621 catcgcttgg aagttgtggt gcacttggag cgatagaatt tgtgtttggg gtagcaggca
    16681 caataggagc acttggaata gtagtattgt tgttttctac tttaattttc tctgctagag
    16741 agtctttgct agctttattg tataaataac caagaccaat agtatttgca ataagtaaaa
    16801 ttcccataac aaaggtaaat tgtgccaaaa atccagctgg tcctttggcg ccaaataaac
    16861 tttcattgct tccactataa gctccaagtc ctatacttga acttttttga agtaaaactg
    16921 ctatacaaat aactacaacg atgataaatt gtaaaatgat taaaagagtg atcattgaaa
    16981 attcctaaaa gttaattttt aaatgattat tttagctaaa taaaacttga aaagttttga
    17041 aacttgaaaa gtttttgtga gaaaaatccc acaaaaattt atctgctatt gaagcttctt
    17101 aagatattaa gtaaagatac gaaaagatta acaaaatcaa gataaagtgc tactgcacct
    17161 tcgattggag ttttataatt tccgcggata atattttgcg tatcataaag aatgtaaaat
    17221 gaaaataata ttgcagctac tgctgaaata gctagattaa ctatactgct ttggaagaaa
    17281 aggtttagta aagatgctgc tacaataacg attaatacta taaataaagc tttacccata
    17341 acggtaaaat ctttttttgt attcatagca aatacgctaa gtcctgcaaa agcaaccgtt
    17401 gttaaagcaa aagcttgagc gatgataatt cctccagctg gtagagctaa aactgaaata
    17461 agcaaaggtg taagcgttaa acctgagcag aaagtaaaac caaaaagtaa aacaagattt
    17521 aatggagctt ctcttttttt ccattgcaaa gcaaataaaa gtccgatttc aacagcaaaa
    17581 aggatccaaa aagttacttg tgattgtata aaaaatgatg ctaaagcaaa aattcctaca
    17641 tacgcaccta ctgttgcagc taataatgaa gcagcaaaaa gttgataagt ttgtttaata
    17701 aaaatactta attcgcttga gcgtgtattt tcaaattctt ttgatcttga gtagtctcta
    17761 tcataaagac tcataaaatt ctccttgcaa aattgttaga ttttttaaaa tcttgagcga
    17821 aatctaacat attagactaa ataaaaagtt aatttatata atatcttatg cttaaatgaa
    17881 atctttgctg aaattttgtt ataatttcaa gattttagtt tcaggttggt tttatggaaa
    17941 atcttattag tggtgcgatt aagtttatgc aagaagactt taaggagcat gaagaacttt
    18001 ttgaaagtct aaaaaataag caaaatcccc atactctttt tataggttgt tctgattcta
    18061 gagtaattcc aaatttgatc accaatacgg gtccaggtga gctttttgta atacgaaata
    18121 ttgcaaatat agttccacct tatcgcattg gggaagatta cttagcgaca acttcagcaa
    18181 tagagtatgc tttaaattca ttgcatatta aaaatatcgt cgtttgtggc catagtaatt
    18241 gtggaggttg caatgctctt tattattctg atgaagagtt aaataaaatt cctaatgtga
    18301 aaaaatggct tactatgtta gatccgataa aaaaagatgt aatgattttt gcaagagacg
    18361 atttggctat gcgttcatgg cttacagaaa aattaaattt agtaaattct ttgcaaaata
    18421 tacttactta tccaggcgtg caagaagctt tagatgaagg aaaaatagaa gtacatgctt
    18481 ggtattatat tatagagaca ggtgaaattt atgagtatga ttttaaagca aaaattttta
    18541 ctttaataca ggataggaaa gttcaatgaa gaaaattatt tttagtttat gtttttttat
    18601 tttatacctt ggagcacaag aatttaaatt tattgatgcg aatattagta aagaggatga
    18661 aggaatttat gctttagttg aaaaatatgt tgatcttaac aatcaaatta aagaatttaa
    18721 gaaaaacaat gatgaaaatt caagcacttt taatggtatt ttaagtgaat ttgaaaaaga
    18781 caaaaagact attttagcaa aaatacccga tatgatagta ggacaaaaga ttaatgaaga
    18841 ggcagtggct agatttttaa aagcaaaaga aaaattacta gatgttcaaa aaaagaatat
    18901 taataagcct tatatttata cagatgccac tcttaatcta gtttatttta atattgtgga
    18961 aagtttttat tcttctttgt ttgaagtgga aaaacttttt aaaaatacag caagcagtga
    19021 agatttgatt gctactgttg ataaggcaat ggaaaattta caaaattctt ctaatgttaa
    19081 tttagatagt tttaaaagca aaattacaaa ttcagaagaa ttagaaaaaa ttaccctaaa
    19141 agaaagatat atcagtaatg ctgtagattc ttattctgaa attcttaagt atttacgctc
    19201 aaatgcagat ttgcttgaaa gtaattatat tttttcatta ctcgagcttc aagtttggat
    19261 agatcgtata aatgaggcaa ttggggtaag ttttgttaat atcggaaaaa tagtaatttc
    19321 tgctttggtt ttagtatttt ttatatcttt aagacgtttt tttgcaaata tagtatattt
    19381 tttccttgtt cagttttttt atagaaataa aaatgatgta gatgatatta aagtcatttt
    19441 tattgagaat attaaaaaac ccgtaggctt cttgttgatt gtctatgcta tttctctttg
    19501 tcttactata gcaacttatc ctgcaccttt gagtgtaaat ttaagtaatt tttttcatat
    19561 agtttatgca gttttaattg catggcttat tttaagaatg cttgatggtt atggcgtggt
    19621 attggtttct aaacttgctc aaaaaagtgg aaaaaaagaa gttgtaaatt taattattaa
    19681 aattttatat tttgtcatta ttattatagc tttattatat attcttgctc aacttggttt
    19741 taatatttcg gctattattg catctttggg aattggtggt ttagctgttg ctttagcggc
    19801 gaaagatatc attgcaaatt tctttgcttc tatactctta ctttttgata atagctttaa
    19861 tcaaggagat tgggtagagg tttcaggcat agaaggaacc gtggttgaaa caggacttag
    19921 aaaaactact attagaactt ttgataattg tcttgtattt ttaccaaatt caactattat
    19981 gggagctaat atcaaaaatt ggagcaaaag acgcatgggt cgccatgtta gaatgtattt
    20041 gggtgttggt tatgatgcta ctcctgaaaa actagaacaa tgtgtaaaag atctaagaga
    20101 atttttgcat acaagtgatt tagtagctca cgatgaggat agcgcattaa aatatggcga
    20161 tcatacaaca aaatatcgtc aaaatcttgt atctattaat gatttagaag gctataaaaa
    20221 tgcttgttat gtggctttaa gcgaatttgc agatagtagt attaatatag agctttattt
    20281 ttatatcaaa gaaataggtg gaaaagattt tagagaagct agacaaagtt taatgcttga
    20341 gtttatgcgt ataattgaaa aaaatggttt aacctttgct ttcccaagtc gtagtattta
    20401 tatagaaaat ttaccacccc ttgatttgca agcaaaagct ataaaatagc aagattttat
    20461 cttgctattt tttaaaccgg cataacgcgt atatttggac ttaattcttc ttgtaaaatt
    20521 gtttcaatag cataaagtgt tgcaccactt ccactagaac aaccactaca agcaccaaga
    20581 taacgaatat aaacatcaat tgctgcacct tcagcctttt gtatatcaat cacttccaaa
    20641 tctccaccat cattatgaag catagggcga atttcagcat ctaaaacact ttcaactgct
    20701 tttaattgtc ccactacggt catttcatca aaagctacat cacttttcat tgtatttttg
    20761 agtttttctc tatctatttc agctctagtt tcagctaaaa tatctacaag gtaataatct
    20821 cttttttcat gtccgcctgg tttgatacag gatttacaaa aagcacccgc tttagtatat
    20881 tgtgtgattt cttctacgct atgcaaatca ttaagtttaa tcacttcttt aatagttcca
    20941 agacttaccc tagcgcactc gcaaactata atttgatctt caaaatcttc aggacttata
    21001 cctttataat gcgctgctgc ttgtttgatt acatcataag ccataaccga acagtgcatt
    21061 ttttgaggtg gaacagctgg agtttctgga ttatcacgca tagcaaattc cacatctaaa
    21121 tttgtgattt ttactgcttc atctacagtt tttcctatac aaagatccac catagtatca
    21181 ctacttgcta tagctgtacc acaaccaaaa cttttaaatt ttgcatcgat aattttatca
    21241 gttttttcat ctacaagcca aaaaagtctt accgcatcgc cgcaactttc tgcaccaaaa
    21301 tcagctacga tcaattttgc attgcgtgct ttagcatctt cttcactaaa ttctcccata
    21361 tgttgaggat tattcattct atcttgaact ttttgtgaat actcatccca aatggatcca
    21421 ccaattaaac tattttttcc catttttcat ccttatttgt aattatttgg attataagca
    21481 taagtacaag aaattgctct taatctctgt gttgcatttt taatttgttt tgctgcataa
    21541 tcaatttctt cttcagtgtt aaaacgtgac aaagaaagcc ttaaagctgt atgcgctaaa
    21601 tcatgctccg caccgatagc ttccataata ggattgcttt ctaaagcttc acttgcacag
    21661 gctgagcccg tacttgcagc tataccattt ttatttaaat cccaaagcat tgcttcgcct
    21721 tcaactcctt taatacttgc taagattgta ttaggcacac ggtgttctct ttttccaacc
    21781 actgttgtat caggcaaggc taaaatttga tcttctagtt tatctcttaa acggcgtata
    21841 tgagaatctt caaaatcaag catagtattt gcaatacgca aagcctcgcc catagccact
    21901 atataaggca catttaaagt tccacttcta cggccaccca tgtgttctcc accgtgtaaa
    21961 agtggagtaa gtttaagtcc tttttttata aaaagtccac ccacaccctt tggtccatga
    22021 aatttatgtg ccgaaaatga agcaaaatca actcctactt gagttaaatt aacctttatt
    22081 ttacctactg cttgagtagc atctgtatga aaaagagcac caaattcatg cgcaagttct
    22141 gccatcgctt taatatcaaa aatcatacct gtttcattat ttgcccacat aacacttaca
    22201 agtgctgttt tatcgctaat cactttacgc aaatcttcta cagtagaaac tccttcttca
    22261 tttacaggaa gttctatgac ttttactcca agacttttta aaaaataagc agcagcagta
    22321 acagcagggt gttctacact agaaataatc acttcattgc gttctttatc taaaatgtaa
    22381 tcaaaataca cacccttaag cacccagtta atgctttctg tcgcacagga ggttataact
    22441 atgtcatcta agtcatttgc tccaagtcct gcataaagtt tatccaaagc ttctcttaag
    22501 gcaggatgtg ttgcgcttcc atattgatga aggctatttg gatttccata tatatccttt
    22561 aaaaaaggta gcatcaactc ataagcatta ggatcaagca ttgtcgttgc gttgttatct
    22621 aaatatactt tcactttaaa atccttaatt tatccttaat tttaattagg atatttttta
    22681 tctttatttg aaaacggata ataacaaaaa tttataaaaa ttaggttaaa aattataaca
    22741 aaaataaaat gctaaagtaa aattttaaag tgaaatattt tgtgaatttt atatagcaaa
    22801 aatgagaaat actatttctt aaatttttct tcgtaatact ttactatttt tgaatcttct
    22861 ttggctgtat gtttaaagat aaaatcttga acaacgagat ttaatttttc ggtcattata
    22921 tttacaaatt tagcttcact gatgataatt tcttcaattt ctaagataat ttttctgtga
    22981 attcttgtat gatggttgat ataaggatat tctatttttc tcataaaggc ttcttcatct
    23041 gaaaaatgtc tattgatcat tatcaacaac tctcttaaga caatttttaa ttcttttgtt
    23101 ccaacatgac attggttcat taaagagagt tttttagaaa tttcaaaaag ttctttatgt
    23161 tgatgatcta aaagatcatt attcattgaa ataatttttt cattataaat catggttttg
    23221 agtactttta tatttatatt tttcgagagc g
//
LOCUS       DAPIWB010000020        23176 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.021, whole genome shotgun sequence.
ACCESSION   DAPIWB010000020 DAPIWB010000000
VERSION     DAPIWB010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23176)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23176)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23176
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.021"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            81..503
                     /gene="cgb"
                     /locus_tag="RJ266_000648"
     CDS             81..503
                     /gene="cgb"
                     /locus_tag="RJ266_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-domain globin Cgb"
                     /protein_id="HDV7354423.1"
                     /translation="MTKEQIQIIKDCVPILQKNGEDLTNEFYKIMFNDYPEVKPMFNM
                     EKQISGEQPKALAMAILMAAKNIENLENMRSFVDKVAITHVNLGVKEEHYPIVGACLL
                     KAIKNLLNPDEATLKAWEVAYGKIAKFYIDIEKKLYDK"
     gene            complement(523..2154)
                     /locus_tag="RJ266_000649"
     CDS             complement(523..2154)
                     /locus_tag="RJ266_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug ABC transporter permease/ATP-binding
                     protein"
                     /protein_id="HDV7354424.1"
                     /translation="MPFIMELLKQNKLKLISFLLFSFITSAVGVLTLVFINDYLLKNA
                     QNIPIFYFIVLLLIFFISSTIVELGLSIFGQNFIFKMQRRVVKQILDTPLLRVAKVGK
                     ARILASLGSDVRNISFGLLRLPDFLQSSILILCTSVYLCYLSPQIFALCVVWIMVIFI
                     TNNFLMMKVYQYFRKARENDDALQNNYQNILDGHKELLINRDRAKLYYEDEFENNARL
                     KKKNSTLGNLFNNLSNNWTNVTLLALVGVEFYLALKFEWASVADATTIALSILFLRTP
                     LVSMIGSFPTLLLAKIALDKIAKLELDDYIEGFKKTHYISEWKKISFRNTQFAYEENF
                     HLNPVNIELKKGELVFLIGKNGSGKSTFCMLLTGLFKPSKGGIYVDDTLIDDKNLDEY
                     RSLISAVFSDFHLFTKTLNKENFASEEKIAFWLEFLELKNKTSVKDNELTLTKLSTGQ
                     KKRLAMLIALLEERDILVLDEWAADQDPVFRRFFYKKLLPLLKEQGKTIFAITHDDAY
                     FDSADRIFLAQNGEISELKGENIKELAKNLVEKFD"
     gene            complement(2217..3500)
                     /locus_tag="RJ266_000650"
     CDS             complement(2217..3500)
                     /locus_tag="RJ266_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7354425.1"
                     /translation="MRKSKFGTKEIKILGLSSLGGTLEFYDFIIFVFFAEYIANVFFP
                     KDMSEFWALLNTYGAFAAGYLARPLGGIVMAHFGDKFGRKNMFMLSILLMVLPTFVLA
                     FIPDYETLGFLAPVLLILIRIFQGIAIGGELPGAWVFVREYCQEKQKAFFLSCLNSAM
                     ALGILLGSIVFLIINAFFSIEEIAAYAWRIAFFVGGIFGIISIYLRRFLQETPVFKQM
                     KKESSLSSFPLKDLFKEKDIVKNLFSSMMMTWVLTGCVIVLVLLMPKFMPSILNLSGV
                     EGSYLQILGILGIALGGAFMGYLVDKFGLFKICIFFSLTFVFFSFLYFYALYELKNLV
                     LVCILYSIICFLGGINVFAPILMSEVFRAKIRFSGISFSYNISYAISGGITPQLVFWL
                     NTLASKNENPFLYGMSIYMIFFSVIGYLCCFYSKR"
     gene            3587..4384
                     /locus_tag="RJ266_000651"
     CDS             3587..4384
                     /locus_tag="RJ266_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDV7354426.1"
                     /translation="MFNFITTLLKTNLYFLEEKTTSKNSNQTHIISLKQSDDEFLNLL
                     FSFLVPQSDEDKNFIEKTRTKIKRNEHNIVLIKNPNFNALIDTGFLDTIDTLKEKLHI
                     HKTDFKDITHIILTHAHPDHIGALMSEENLFPKAQILIDKKEYDFWIKSDRQEIKNTL
                     LKLKNIEFIDHSKDLIFQNSGIKAIPAYGHTPGQNAIIIDDKIVFWGDLLHLYDIQIP
                     KPKIAIKFDIDQNEAIQTREKLLKEFKERKLKVIGTHVPFIKPKFLD"
     gene            4472..4690
                     /gene="infA"
                     /locus_tag="RJ266_000652"
     CDS             4472..4690
                     /gene="infA"
                     /locus_tag="RJ266_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HDV7354427.1"
                     /translation="MAKDDVIEIDGTVLEALPNANFKVELDNKHVILCHIAGKMRMHY
                     IRIMPGDKVKVELTPYSLDKGRITFRYK"
     gene            4862..4975
                     /gene="rpmJ"
                     /locus_tag="RJ266_000653"
     CDS             4862..4975
                     /gene="rpmJ"
                     /locus_tag="RJ266_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003720928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HDV7354428.1"
                     /translation="MKVRPSVKKMCDKCKVVRRKGVVRIICENPKHKQRQG"
     gene            4978..5343
                     /gene="rpsM"
                     /locus_tag="RJ266_000654"
     CDS             4978..5343
                     /gene="rpsM"
                     /locus_tag="RJ266_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HDV7354429.1"
                     /translation="MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYDKR
                     VHELSEDEAAAIRKEIQENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQK
                     TKTNARTRKGKRKTVGAKS"
     gene            5353..5745
                     /gene="rpsK"
                     /locus_tag="RJ266_000655"
     CDS             5353..5745
                     /gene="rpsK"
                     /locus_tag="RJ266_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HDV7354430.1"
                     /translation="MAKRKIVKKKVVKKNIAKGIVYISATFNNTMVTVTDEMGNAIAW
                     SSAGGLGFKGSKKSTPYAAQQAVEDALNKAKEHGIKEVGIKVQGPGSGRETAVKSVGA
                     MEGIKVTFLKDITPLAHNGCRPPKRRRV"
     gene            5773..6399
                     /gene="rpsD"
                     /locus_tag="RJ266_000656"
     CDS             5773..6399
                     /gene="rpsD"
                     /locus_tag="RJ266_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HDV7354431.1"
                     /translation="MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHG
                     ARKGKISEYGLQLREKQKAKFMYGVSEKQFRRLFAEAARREGNTGVLLIQLLEQRLDN
                     VVYRMGFATTRRFARQLVTHGHVLVNGKRVDIPSFRVEAGAKIEIIEKSKNNPQITRA
                     IELTAQTGIVAWVDVEKDKRFGIFTRKPEREEVVIPVEERFIVELYSK"
     gene            6412..7425
                     /locus_tag="RJ266_000657"
     CDS             6412..7425
                     /locus_tag="RJ266_000657"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HDV7354432.1"
                     /translation="MRNITTSAYTPTEFTIENISDTVAKISAWPFEIGYGITLAHPLR
                     RLLYTSTIGYAPTAIHIDGVAHEFDSMRGMLEDVALFIINLKKLRFKIKGDSNKEIVE
                     FSFKGSKEIYGKDLNNDQVEVVNKDAYLATINEDAELKFTLIVEKGIGYVPSEEIKEL
                     INDPKFIALDAFFTPVREATYDIEKVLFEDNPDYEKVVLTVTTDGQITPNEAFQNALE
                     AMYKQLSVFDKITNVRSVIKNQATSNELENTKLLQNITDLNLSARSYNCLEKAGVVYI
                     GELALMSVSELAGLKNLGKKSLDEIKNIMESIGFPVGTSKLSDNKEILKNKIAELKAQ
                     NEG"
     gene            7429..7782
                     /gene="rplQ"
                     /locus_tag="RJ266_000658"
     CDS             7429..7782
                     /gene="rplQ"
                     /locus_tag="RJ266_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HDV7354433.1"
                     /translation="MRHKHGYRKLGRTSSHRAALLKNLTIALVNSGKIETTLPKAKEL
                     RGYVERLITRARLGDFNAHRAVFASLQDKNATNKLVTEIAPKFKDRNGGYTRIIKTRI
                     RRGDAAEMAFIEFVA"
     gene            7955..8854
                     /gene="hisG"
                     /locus_tag="RJ266_000659"
     CDS             7955..8854
                     /gene="hisG"
                     /locus_tag="RJ266_000659"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HDV7354434.1"
                     /translation="MQENTRLRIAIQKSGRLSKESIELLSECGVKMHIHEQSLIAFST
                     NLPIDILRVRDDDIPGLIFDGVVDLGIIGENVLEENELERQSLGENPSYKLLKKLDFG
                     YCRLSLALPQENKFQNLKDFEGLRIATSYPQLLKRFMKENGINYKNCTLTGSVEVAPR
                     ANLADAICDLVSSGATLQANNLKEVKVIYESRACLIQKENALSKEKQALVDKIMLRVA
                     GVMQARESKYIMLHAPKEKLDKIQALLPGVERPTILPLAHDEKNVALHMVSKENLFWE
                     TMEALKEEGASSILVLPIEKMLK"
     gene            8862..10148
                     /gene="hisD"
                     /locus_tag="RJ266_000660"
     CDS             8862..10148
                     /gene="hisD"
                     /locus_tag="RJ266_000660"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HDV7354435.1"
                     /translation="MQILVYDNLDEKQKEEALKRPAISAKDEISKIVSSIIKEVQEKG
                     DEALIEQALKFDKAEISKIKITQEEITQASNRLDKDLQEAILVAYENIKKFHEAQIPH
                     EIALETTKGVKCEVLTRPIEKVGLYIPGGLAPLFSTVLMLAIPAKIAGCEKIVLASPA
                     KINDAVLFCAKLCGVDEIYQMGGAGAIAALAYGTQSVLKVDKIFGPGNAFVTEAKRQV
                     SSDINGAAIDMQAGPSEVLVIADDLANEKFVASDLLSQAEHGADSQVILVCLSQDFAK
                     KASDEVQSQLELLPRKELASKSIANSRIIIAKDLNQALEISNLYAPEHLIIQTQNPRE
                     LLKGVKHAGSVFLGAYSPESMGDYASGTNHVLPTYGLTKTHSSLGLADFSKRMTVQEL
                     SKEGFLALGKSVEILAQNEHLDAHKNAVTFRLESLK"
     gene            10145..11203
                     /gene="hisB"
                     /locus_tag="RJ266_000661"
     CDS             10145..11203
                     /gene="hisB"
                     /locus_tag="RJ266_000661"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HDV7354436.1"
                     /translation="MSQKILFIDRDGTLIEEPKSDFQIDTLEKLRFEKDAIPTLLKLK
                     KFGFKFVMVSNQDGLGTPSFPKENFEIAHEKMLDILKSCGIEFQDIFICPHFENENCA
                     CRKPKTAMLEEYIKHELYDKEQSFVIGDRESDMILASNLGVRGLKYGELSWKEIENEI
                     LSSFRSASYQRTTKETDIKVKVCLNGGKVSIKTGIDFFDHMLEQIAVHGGIGLEISCK
                     GDLEIDEHHSVEDVALALGACIKKALGDKIGIARYGFALPMDECLASCAMDFCNRPHL
                     VYKAKFKKSHLGALSTEMIEHFFYSLSYAMGVSLHLKVKGKNDHHKAEGLFKAFAKAL
                     KMAVKIESENLASSKGVI"
     gene            11200..11787
                     /gene="hisH"
                     /locus_tag="RJ266_000662"
     CDS             11200..11787
                     /gene="hisH"
                     /locus_tag="RJ266_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDV7354437.1"
                     /translation="MKIIIIDTACANLASLKFCLDRLGFNATISRDLKELESADKLFL
                     PGVGTAKEAMKNLEQFNLIDFIQNTKKPLLGICLGMQILGNFSEELNQETLKLIDFTT
                     QKFKAKEGFTFPHMGWNEVYSSHALFKGLEGAYFYFVHSYCVGLGKYTIADCEYSQKF
                     SASVMKDNFYGVQFHPERSSEAGEILISNFIKDIG"
     gene            11784..12515
                     /gene="hisA"
                     /locus_tag="RJ266_000663"
     CDS             11784..12515
                     /gene="hisA"
                     /locus_tag="RJ266_000663"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HDV7354438.1"
                     /translation="MTQIIPALDLIDGEVVRLVKGDYEQKKVYKYNPLKKFKEYEKAG
                     AKELHLVDLTGAKDPSKRQFALIEKLAKEVSVNLQVGGGIRSKAEVRALLDCGVKRVV
                     IGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFY
                     SNKGLKHILCTDISKDGTMQGVNARLYKLIHEIFPHICIQASGGVASLKDLENLKGIC
                     SGVIVGKALLDGVFSVEEGIRCLAN"
     gene            12500..13456
                     /locus_tag="RJ266_000664"
     CDS             12500..13456
                     /locus_tag="RJ266_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HrgA protein"
                     /protein_id="HDV7354439.1"
                     /translation="MSSKLSYKELTLEILKQSDRPLSVNEIWQKALEQGLDKKLSSIG
                     QTPIATLGARIYVDIKELQHNSLFIKASQKPTTFWLKERENELLKLDNKNEITNEKQE
                     KNKFHERDLHPLLVKFLYENLDFNLNCKTIYHEQSKKGKGGEDKWNYPDIVGVYFPYD
                     DYEKETITLLENIKQNSYKLFSFELKIALNFSNLKECYFQAVSNSSWANEGYLVVLQE
                     IDSEVLSELRRLNQSFGIGVIKLEKDISNSQILISAKEKELDIQTLNMLINKNPNFKE
                     FIDDINKQIKVGKEAKIQTNFDEIKSDEEMEKYLKEKCILEK"
     gene            13457..14224
                     /gene="hisF"
                     /locus_tag="RJ266_000665"
     CDS             13457..14224
                     /gene="hisF"
                     /locus_tag="RJ266_000665"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDV7354440.1"
                     /translation="MLTKRIIACLDVKDGRVVKGTQFKNHKDMGDIIELARYYSQNGI
                     DELVFYDIAASARKERISREWVSEVAKNINIPFCVAGGIKSEEDAAELLANGADKISI
                     NSPALNDPSLITRLAKSFGVQCVVVGIDSFKDENGNLKVFQYTGDEKTSKHSGKSTLE
                     WVKKVQDLGAGEIVLNMMNQDGVKNGYDLEQLEAVYKICKVPLIASGGAGKMEHFLKA
                     FKLGIDGALAASVFHQKLMDIKELKIYLKNQGLSIRI"
     gene            14226..14849
                     /locus_tag="RJ266_000666"
     CDS             14226..14849
                     /locus_tag="RJ266_000666"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HDV7354441.1"
                     /translation="MQNFKELNEKIAWQKVDHLLPVIIQDAKTCEVLMLGFMNNEALE
                     KSLESGKVVFFSRTKQRLWMKGEESGNFLNIVDLSLDCDNDTLLILANPVGPTCHTGD
                     ISCFEKISKNADFVFLARLEKLINSRKNADENTSYTAKLFKSGTKRIAQKVGEEGVET
                     ALAATVKDKEELICEAADLMYHLSVLLADANLSFSDVISKLKERHKA"
     gene            complement(14874..16034)
                     /locus_tag="RJ266_000667"
     CDS             complement(14874..16034)
                     /locus_tag="RJ266_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-carboxylate
                     N-succinyltransferase"
                     /protein_id="HDV7354442.1"
                     /translation="MINTKEDFLLLIKQIEQKSGYKKPKAFGIARLDRGQLNKNKILQ
                     ASFALINYEQNFGSAAIMLEAFMQRGVEIDFNASEFVQTLKLEDIDFALSCFKPFLEE
                     DGHQNIDLLKIIKDKFKDDEFSFVCLFEDKEPLSVESIYLKLYLLSTKKVPLRSINLN
                     GAFGLLSNVAWSDDKPIELEYLRVNEMRLKMSNQYPKIDFVDKFPRFLAHIIPEDNTR
                     ILESSKVRMGASLAAGTTIMPGASYVNFNAGTTGACMVEGRISSSAIVGEGSDVGGGA
                     SILGVLSGTSGNAISVGKACLLGANSVTGIPLGDNCIVDAGIAVLEGTKFLLKDAEEL
                     AKLNPYFNFDKEIYKGLELKGLNGLHFRQDSISGAMIVALNKKAVKLNEALH"
     gene            complement(16060..17166)
                     /locus_tag="RJ266_000668"
     CDS             complement(16060..17166)
                     /locus_tag="RJ266_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HDV7354443.1"
                     /translation="MEEQILEKLKTVKYPGFEKDIVSFNFVKDIKIQDDGVFIDIEIV
                     SANPEVANEIRKNTIEALSSLALKNIELNIITPKIPEEKSNSRSGKNIAPQVKNFIMV
                     SSGKGGVGKSTTTVNLAISMAKMGKRVGILDADIYGPNIPRMLGETKTQPEVVGQRLK
                     PILTHGVYMMSMGVLIEEGQGLMWRGAMIMKAIEQLLADVIWPELDVLFLDMPPGTGD
                     AQITSAQSIPITAGVCVSTPQTVSLDDSKRALDMFNKLHIPIAGVIENMSGFLCPDNG
                     KEYDIFGKGTAEDMAKAYKSEVLAQIPIEMIVREGGDEGKPVSFYHPESVSSRRYLMA
                     AEKIWSFIEKINNEGGADNSAIQPVMNGKSACSH"
     gene            17289..18404
                     /locus_tag="RJ266_000669"
     CDS             17289..18404
                     /locus_tag="RJ266_000669"
                     /EC_number="2.7.7.60"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase/2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase"
                     /protein_id="HDV7354444.1"
                     /translation="MSEMSLIMLAAGNSTRFNTKVKKQFLRLGNDPLWLYATKNLSSF
                     YPFKKIVVTSSNITYMKKFTKNYEFIEGGDTRAESLKKALELIDSEFVMVSDVARVLV
                     SKNLFDRLIENLDKADCITPALKVADTTLFDNEALQREKIKLIQTPQISKTKLLKKAL
                     DQNLEFTDDSTAIAAMGGKIWFIEGEENARKLTFKEDLKKLDLPTPSFEIFTGNGFDV
                     HEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTDMK
                     FKNANSMELLKQAYDKVREIGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEF
                     RINVKATTTEKLGFIGRKEGMAVLSSVNLKYFDWTRL"
     gene            18401..19288
                     /locus_tag="RJ266_000670"
     CDS             18401..19288
                     /locus_tag="RJ266_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDV7354445.1"
                     /translation="MKVLIIENEIYLAQSISIKLSDAGYSCEIINSFDEYNGEKYYDI
                     VLLSTNTNNFLKAVGQFKHSIIILLISYISTDTVSNPLKLGASDYIQKPFMIEELIRK
                     IKHYQDFRKLSILNKAYQSYIKSRLETIKIPEYNYKKLKLPLILKSNKQSSADAFVFN
                     YANECDITLSFIDLTSTNSVEKVMKLPTENNLLFLSNFQALKAAEKEKLLDFIQNKNV
                     ILHTNSNTDDLKINCINLNDNEKNINSNEILTIDEYVKYVIINYQNIFPDTDLSKKLG
                     ISRKSLWEKRKKYEISKKK"
     gene            19266..20426
                     /locus_tag="RJ266_000671"
     CDS             19266..20426
                     /locus_tag="RJ266_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HDV7354446.1"
                     /translation="MKSARKNKNITIDQNEFGILSLIKEGLLGTCTHLMNEKEVNEII
                     KSGKFKGESFPYPLSFAPKNAEEALNDIKSGDRIDLILDEKVVGHIDFKSQFKNNKNF
                     SDIFSPNTCSLEDMGTTCISGKIEIYNSQIEKIKENFQQIKNNLNAQKITAIVSSFDP
                     LHRAHERMFRWTIDKADLVVIFLVESFDVNGFEFELKEAYLKKFIQNYLPPDRIFIFP
                     LKNINIFHAHLNPGLESIIAKSLGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYG
                     IEVIVLPEFVFCDQCRMIVSTRSCPHGCHHHLHYNSQSLKDLLRAGIIPPAIFMRKEV
                     SSVILTSLFPNRLKNMQKIYNELFPTDGILEYKNDEEFYQKLLEIHQMSYMV"
     gene            20431..20931
                     /locus_tag="RJ266_000672"
     CDS             20431..20931
                     /locus_tag="RJ266_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HDV7354447.1"
                     /translation="MQKLFLTFFYSGSVKKASGTFGTIAALIPAFFILKYLGINTLFL
                     LSILIFVASIRVIDDYEKKTGIHDDKHIVIDEVAGVFLACAIAASVENSIVNFILAFV
                     LFRLFDITKPSIIGKIDKKVKGGLGVMLDDMLAGLFAGLLSAVIYGFLLKFNLVFWDI
                     NLKDLF"
     gene            21010..21273
                     /gene="rpsT"
                     /locus_tag="RJ266_000673"
     CDS             21010..21273
                     /gene="rpsT"
                     /locus_tag="RJ266_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HDV7354448.1"
                     /translation="MANHKSAEKRARQTIKKTERNRFYRTRLKNITKAVREAAANGDK
                     NAANEALKVANKSIHAMVSRGFIKKQTASRRVSRLALLVNKIA"
     gene            21292..22359
                     /gene="prfA"
                     /locus_tag="RJ266_000674"
     CDS             21292..22359
                     /gene="prfA"
                     /locus_tag="RJ266_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HDV7354449.1"
                     /translation="MLASKLDPFLRRFEELNSLLSSSDIINDISKMTTLSKEQKNLEP
                     IVLKVKEYLKTLDNIEENKALLNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDP
                     NDERNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEII
                     MLVKGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDDIEIEINPNDL
                     KVDVMRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYE
                     MQESERLAKESEARKSQVGSGDRSERIRTYNFPQNRISDHRINLTLYRLDAIMQDGLF
                     DEIIEPLITHHQAQALQEQNL"
     gene            complement(22373..23128)
                     /locus_tag="RJ266_000675"
     CDS             complement(22373..23128)
                     /locus_tag="RJ266_000675"
                     /EC_number="1.14.14.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HugZ family heme oxygenase"
                     /protein_id="HDV7354450.1"
                     /translation="MNFESIISHMNDHHKSNLVDLCKKFGGIEQVQDVFLKSVDFNGL
                     DLVYNDKENLRVEFPKKADENTIKDTIISLCMSAKSEQNFSGVEKELNEFMLSFNSVA
                     LATLNANGEVVCSYAPFVSTQWGNYIYISEVSEHFNNIKVNPNNIEIMFLEDESKAAS
                     VILRKRLRYRVNASFLERGERFDQIYNEFEKQTGGEGGIKTIRKMLDFHLVKLEFKKG
                     RFVKGFGQAYDIENGNVAHVGASGNPHKFLHKY"
BASE COUNT         8714 a         3495 c         3731 g         7236 t
ORIGIN      
        1 gagcataatt ttaacacaag tcaatttttt tctccttttt aagatataaa atatctcttt
       61 tacaacaaaa aggagaaact atgacaaaag aacaaattca aatcatcaaa gattgtgtgc
      121 ctattttgca aaaaaatgga gaggatttaa ccaatgagtt ttataaaata atgtttaatg
      181 attatcctga ggtaaaacct atgtttaata tggaaaaaca aatttcagga gaacaaccaa
      241 aagctttagc aatggcgatt ttaatggcgg ctaaaaatat agaaaatttg gaaaatatga
      301 gaagctttgt tgataaagtt gccataactc atgttaattt aggagttaaa gaagagcatt
      361 atcctatagt tggagcttgc cttttaaagg ctattaaaaa tcttttaaat cctgatgaag
      421 ccactcttaa agcttgggaa gttgcttatg gaaaaattgc taaattttat atcgatatag
      481 aaaaaaagct ctatgataaa taatataagc ccattttggg ctttaatcaa atttttctac
      541 taaattttta gctaattcct ttatattctc accctttaat tcgctgattt caccattttg
      601 agccaagaaa attctatcag cactatcaaa atatgcatca tcatgtgtga tagcaaagat
      661 tgttttacct tgctctttta gcaaaggtaa aagtttttta taaaaaaatc ttctaaaaac
      721 aggatcttga tcagccgccc attcatcaag cactaaaata tccctttctt caagcaaggc
      781 tataagcata gctaaacgct ttttttgccc tgtagaaagt ttggttaagg tcagttcatt
      841 atctttgaca cttgttttat ttttaagttc taaaaactcc aaccaaaaag caattttttc
      901 ttcgcttgca aaattttctt tatttaaggt tttagtaaaa agatgaaaat cgctaaaaac
      961 agcagaaata agagatctat actcatctaa atttttatca tctataagcg tatcatcaac
     1021 ataaattccg cctttgcttg gcttaaaaag tcctgtcaaa agcatacaaa aagtggattt
     1081 accacttcca tttttaccta ttaaaaatac caattcacct tttttaagtt ctatatttac
     1141 aggatttaaa tgaaaatttt cttcataagc aaattgagta tttctaaaag aaattttttt
     1201 ccattcactg atataatgtg tttttttaaa accttctata taatcatcta attccaattt
     1261 tgcgatctta tccaaagcga tttttgccaa aagcaaagta ggaaaagatc ctatcataga
     1321 tactaaaggg gttcgtaaaa acaaaataga aagagctata gttgtagcat ctgcaacact
     1381 tgcccattca aattttaaag ctaagtaaaa ctctacaccc actaaagcca aaagagttac
     1441 atttgtccag ttgtttgaga gattgttaaa aagattacct aaagtactat ttttcttttt
     1501 caatcttgca ttattttcaa attcatcttc ataataaagc ttggctctat cacgattgat
     1561 caaaagttct ttatgtccat ctagtatatt ttggtaatta ttttgcaaag catcatcatt
     1621 ttcccttgcc tttctaaaat actgatatac tttcatcatc aaaaaattat tagtaataaa
     1681 aataaccata atccatacca cacacaaagc aaaaatttgt ggtgaaagat aacataaata
     1741 aacactagtg cataaaatca atatacttga ttgtaaaaaa tcaggcaatc ttaaaagccc
     1801 aaaagatata tttctcacat cacttcccaa agaagctaaa attctagcct tacctacttt
     1861 agcgactctt aacaaagggg tgtctaagat ctgctttact acgcgccttt gcattttaaa
     1921 aataaaattt tgtccaaaaa tactaagtcc aagttcaact atggtagaac ttataaaaaa
     1981 aatcaaaagc aaaacaataa aataaaaaat aggaatgttt tgtgcatttt taagcaaata
     2041 atcattgata aaaacaagag ttaaaactcc aacagcgctt gtaataaaag aaaaaagcaa
     2101 aaaagaaatc aactttaatt tattttgctt aagtaattcc ataataaaag gcatttataa
     2161 actccaaaat ataattttaa ttataacatt ttaagagtga ttatcaaaat tttattttat
     2221 cttttactat aaaaacagca caaatagcca ataacgctaa aaaaaatcat atatatactc
     2281 ataccatata aaaatggatt ttcattttta ctcgcaagtg tattaagcca aaaaacgagt
     2341 tgcggagtaa taccgcctga aattgcataa gaaatattat aagaaaaaga aattcctgaa
     2401 aatcttattt tagctctaaa aacttcactc attaaaatag gtgcgaacac attaatccca
     2461 cctaaaaaac aaataatcga atacaaaata cacaccaaaa ccaaattttt aagctcatat
     2521 aaagcataaa aatataaaaa agaaaaaaat acaaaagtta aagaaaagaa aatgcaaatt
     2581 ttaaataaac caaatttatc tacaagataa cccataaaag ccccgcctaa agctattccc
     2641 aaaattccta atatctgtaa ataacttcct tcaaccccac ttaaatttaa aatactaggc
     2701 ataaatttag gcatcaataa aacaagcaca ataacacaac ctgttaaaac ccaagtcatc
     2761 atcattgatg aaaataaatt ttttacaata tccttttctt taaataaatc tttaagcgga
     2821 aaagaactaa gcgatgattc ttttttcatt tgtttaaaaa caggagtttc ttgcaaaaat
     2881 ctacgcaaat aaatagaaat aatcccaaaa attccaccta caaaaaaagc aatacgccaa
     2941 gcataagcag caatttcttc tatactaaaa aaagcattaa tgattaaaaa tactatactt
     3001 cctaacaaaa ttcctaaagc catagctgaa tttaaacagc ttaaaaagaa agctttttgt
     3061 ttttcttgac aatactctct tacaaaaacc caagctccag gcaattctcc acctatagct
     3121 atgccttgaa aaattcttat aagtatcaat aaaacaggag ctaaaaaccc aagagtttca
     3181 taatctggaa taaaagctaa gacaaaggta ggaagaacca ttagtaaaat acttagcata
     3241 aacatatttt tacgcccaaa tttatctcca aaatgtgcca taactatacc acccaaagga
     3301 cgtgctaaat atccagctgc aaatgctcca taagtattta ataaagccca aaattcactc
     3361 atatctttag gaaaaaatac attggctata tattcagcaa aaaagacaaa aataataaaa
     3421 tcataaaatt ctaaagttcc tcctagtgaa gaaagtccta agatcttaat ttcctttgtt
     3481 ccaaattttg attttctcat tgattaatta ccttaaattt taaaaacatt gtttttatta
     3541 tactataatc atttccaaaa tattatctaa aaatttaagg ataaatatgt ttaattttat
     3601 aaccactctt ttaaaaacca atctttattt tttagaagaa aaaaccacaa gcaaaaattc
     3661 aaatcaaacc catataatct cacttaaaca gtctgatgat gaatttttaa atttattatt
     3721 ttctttttta gtgccacaaa gcgatgaaga taagaatttt atagaaaaaa ctcgcacaaa
     3781 aatcaaaaga aatgagcata atattgttct gataaaaaat ccaaatttta atgctttaat
     3841 agacacaggg tttttagata ctattgacac attaaaagaa aaattacata tccataaaac
     3901 cgattttaaa gatatcactc atattatctt aacacacgca catcctgatc atataggtgc
     3961 tttaatgagc gaagaaaatc tttttccaaa agctcaaatt ttaattgata aaaaagaata
     4021 tgatttttgg atcaaaagcg atagacaaga aattaaaaac accttgctta aacttaaaaa
     4081 tatagaattt atcgatcatt ccaaagattt gatctttcaa aattcaggca ttaaagccat
     4141 acctgcttac gggcataccc caggtcaaaa tgctatcata attgatgata aaatagtctt
     4201 ttggggagat ttacttcatc tttatgatat acaaatccca aaacctaaaa tcgctataaa
     4261 atttgatata gatcaaaatg aggctataca aacaagggaa aaactactta aagaatttaa
     4321 agaaagaaaa ctcaaagtta tagggactca tgtgcctttt atcaaaccta aatttttaga
     4381 ttaattactt aaaaattact aaaaattaag taaaaatttt aataattttt gctaaaatta
     4441 tagccttttt atttcatgaa aggagaaaat tttggcaaaa gatgatgtaa ttgaaattga
     4501 tggcaccgta cttgaagcat tgcctaatgc aaatttcaag gttgaacttg acaacaaaca
     4561 tgtaatttta tgtcatattg caggaaaaat gcgtatgcat tatataagaa taatgccagg
     4621 tgataaagta aaagtagaac ttacacctta tagccttgat aaagggcgta taacttttag
     4681 atataaataa tctaagttat ttaaaagcta attttagata aaattagagt ttttgcgaca
     4741 aattacatcg aactatatga agaagtattt ttaaaatcca ccacttattt tgaaaatagt
     4801 tggttattca taaaacctga tgtagtcgta aatcaagtgg aattcattca aggagacgct
     4861 catgaaagtg agaccatcgg ttaaaaagat gtgcgacaaa tgcaaagtag ttcgccgtaa
     4921 aggcgtggtt cgcattattt gcgaaaatcc aaaacataaa caaagacaag gataaacatg
     4981 gctcgtattg caggtgtgga tttaccaaag aaaaaaagaa ttgagtatgg actaacctat
     5041 atttatggta taggactttt cacttcaaga aaaattctag ataaagtagg aatttcttat
     5101 gataaaagag ttcatgagtt aagtgaagat gaagcagcag ctatccgtaa agaaattcaa
     5161 gaaaactata tggttgaagg ggatttgaga aaacaagttg ctatggatat taaagcactt
     5221 atggatttag gaagctttag aggtttaaga cacagaaaag gcttaccagt tcgcggacaa
     5281 aaaacaaaaa caaacgcaag aactagaaaa ggtaagagaa aaactgttgg tgcaaaatca
     5341 taaggataaa tcatggcaaa aagaaaaatc gtaaagaaaa aagtagttaa aaaaaatata
     5401 gcaaaaggta ttgtttatat cagtgcgact tttaacaata ctatggttac agtaactgat
     5461 gaaatgggaa atgctatcgc ttggagtagt gcaggtggtt taggatttaa aggttctaaa
     5521 aaatcaactc cttatgcagc acaacaagca gtagaagacg ctttaaataa agcaaaagaa
     5581 cacggaatta aagaagtagg cattaaagta caaggaccag gaagcggtag agaaactgct
     5641 gttaagagtg taggtgctat ggaaggaatc aaagtaactt tcttaaaaga tatcactcca
     5701 ttagctcaca atggttgcag accgcctaag cgtcgtcgtg tctaagatat aagaaaaatt
     5761 taggagaata ttatggcaag atatagagga ccagtagaaa aattagaaag acgctttggt
     5821 gttagcttag cattaaaagg agaaagaaga ctagctggca aaagtgcact agataaacgc
     5881 ccttatgcac caggacaaca cggagcaaga aaaggtaaaa ttagtgagta tggacttcaa
     5941 ttaagagaaa aacaaaaagc taaatttatg tatggagtaa gcgaaaagca attccgtcgt
     6001 ttatttgctg aagcagcaag aagagaagga aatacagggg tattacttat ccaactttta
     6061 gaacaaagat tagacaatgt agtatataga atgggttttg ctacaacacg tcgttttgca
     6121 agacaacttg taacacatgg acatgtttta gtaaatggta aaagagtgga tattcctagc
     6181 tttagagtag aagcaggtgc taaaattgaa attatcgaaa aaagcaaaaa caatcctcaa
     6241 attacaagag ctatcgaact tacagcacaa actggaatcg ttgcttgggt tgatgttgaa
     6301 aaagataaga gatttggaat tttcacaaga aaacctgaaa gagaagaagt tgtcattccg
     6361 gttgaggaaa gatttatcgt tgagctttac tctaaataat aggggctaaa tatgagaaat
     6421 attacaacat ctgcttatac gccaacagaa tttacaatag aaaacattag tgatactgtg
     6481 gctaaaatca gtgcttggcc ttttgagatc ggctatggaa tcaccctagc ccatccttta
     6541 cgccgtttac tttacactag caccatagga tatgctccaa ctgcgattca tattgatggc
     6601 gtagctcatg aatttgatag catgcgtggt atgcttgaag atgtagcact ttttatcatt
     6661 aatctaaaaa aactacgctt taaaattaaa ggcgactcaa ataaagaaat agtagaattt
     6721 agctttaaag gctcaaaaga aatttacggc aaagatctaa ataatgatca agtagaagta
     6781 gtaaataaag acgcctatct agcaacaatc aacgaagatg ctgaactcaa attcacattg
     6841 atcgttgaaa aaggtattgg ctatgtacca agcgaagaaa ttaaagagct tataaatgat
     6901 cctaaattta tagctttaga tgctttcttt acacctgtaa gagaagcaac ctatgatatt
     6961 gaaaaagttt tatttgaaga taatcctgat tatgaaaaag tggttttaac cgtaacaact
     7021 gatggacaaa tcactccaaa tgaagctttt caaaatgctc tagaagctat gtataaacaa
     7081 ttatcagtat ttgataaaat taccaatgtt agaagtgtaa ttaaaaatca agcaacaagc
     7141 aatgaactag aaaatactaa attattgcaa aacattacag atttaaattt aagtgctaga
     7201 agttataatt gtcttgaaaa agcaggagtg gtttacatag gcgagcttgc tttgatgagt
     7261 gtaagtgaac ttgcagggct taaaaattta ggtaaaaaat ctcttgatga aattaaaaac
     7321 atcatggaaa gcataggttt tcctgtggga acttctaagc ttagcgataa taaagaaata
     7381 cttaaaaata aaatcgcaga attaaaagca caaaacgaag gataaagaat gagacataaa
     7441 catggatata gaaaacttgg cagaacttca tctcatcgtg ctgccttatt aaaaaattta
     7501 actatagctt tagtaaatag cggaaaaatc gaaaccactc taccaaaagc taaagaatta
     7561 agaggttatg tagaaagatt gattactaga gcaagacttg gagattttaa cgctcataga
     7621 gcagtttttg cttcattaca agataaaaac gctaccaata aactagtaac tgaaattgct
     7681 ccaaaattca aagatcgcaa tggcggatat acaagaatca tcaaaacaag aattcgccgc
     7741 ggtgatgccg ctgaaatggc tttcatcgaa tttgtagctt aatcaaatcc tagcttttgc
     7801 taggattaat actttaatta aataccttaa aaataaaaag ttttaaataa ttattttaaa
     7861 taaaattaaa tttatttatt ttctaaaacc cttgctaaaa attcaactac ttatgctaat
     7921 ataagttttt aatttttaat ttcaaggata tgttatgcaa gaaaacactc gtttacgcat
     7981 tgcgatacaa aaatcaggta gactttcaaa agaatccata gagcttcttt cagaatgtgg
     8041 tgttaaaatg catatccatg aacaaagctt gatcgctttt tctacaaatt tacccataga
     8101 tattttacgc gttagagatg atgatatccc tgggcttatt tttgatgggg ttgtagattt
     8161 aggcattata ggggaaaatg ttttagaaga aaatgaactt gaacgccagt ctttaggaga
     8221 aaatccaagc tataagcttt taaaaaagct agattttgga tattgccgtc tttctcttgc
     8281 cttacctcaa gaaaataaat ttcaaaattt gaaagatttt gaaggcttaa ggatagctac
     8341 ttcttatcca caacttttaa agcgttttat gaaagaaaat gggattaatt ataaaaattg
     8401 tacgcttaca ggttctgttg aagtagcccc tagggcaaat ttagccgatg cgatttgcga
     8461 tcttgtttca agcggggcaa ctttacaagc aaacaatctt aaagaagtta aagtcattta
     8521 tgaatctcgt gcttgtttga ttcaaaaaga aaatgcttta agtaaagaaa aacaagcctt
     8581 agtggataaa attatgttgc gtgtagcagg agtaatgcaa gcaagagaat ctaaatacat
     8641 tatgcttcat gctccaaaag aaaagcttga taaaattcaa gccctacttc caggagttga
     8701 aagaccgact atcttacctt tagcacacga tgaaaaaaat gtagctttac atatggtaag
     8761 taaagaaaat cttttttggg aaaccatgga ggctttaaaa gaagaaggtg cgagttcgat
     8821 tttagttctg cctatagaaa aaatgttaaa gtgagtaaaa aatgcaaatt ttagtatatg
     8881 ataatttgga tgaaaaacaa aaagaagaag cgttaaaacg ccctgctata agtgcgaaag
     8941 atgaaatttc aaaaatagta agttctatca ttaaagaagt gcaagaaaaa ggcgatgaag
     9001 ctttgataga acaagctttg aaatttgata aggctgaaat ttcaaagatt aaaatcactc
     9061 aagaagaaat cactcaagca agcaatcgtt tagataaaga tttacaagaa gctattttag
     9121 tggcttatga aaatatcaaa aaatttcacg aagcccaaat cccacatgaa atcgctcttg
     9181 aaactacaaa aggcgttaaa tgtgaagttt taacacgccc tatagaaaaa gtaggacttt
     9241 acataccagg gggtttggca cctttgtttt caacggtttt aatgctagct attcctgcaa
     9301 aaattgcagg ttgtgaaaaa atcgttttag caagtcctgc aaaaatcaat gatgctgtgc
     9361 ttttttgtgc taagctttgt ggcgtggatg aaatttatca aatgggcggt gcaggagcta
     9421 tagcagcttt ggcttacggt acccaaagtg ttttaaaggt ggataaaatt tttggcccag
     9481 gaaatgcctt tgtaaccgaa gcaaaacgcc aagtaagtag tgatataaac ggagcagcta
     9541 ttgatatgca agcaggacct agtgaagttt tagtcatagc tgatgattta gctaatgaaa
     9601 aatttgtagc tagtgatttg ctttcacaag ctgaacatgg tgcagattct caagtgattt
     9661 tagtgtgttt aagtcaagat tttgctaaaa aagcaagtga tgaagtccaa agtcaattag
     9721 aacttttgcc tcgcaaagaa cttgcaagca aaagcattgc taattcacgc attatcatag
     9781 ctaaagattt aaatcaagcc ttagaaattt caaatcttta cgcccctgaa catttgatca
     9841 tacaaactca aaatccacga gaacttttaa aaggtgtaaa acacgcagga tcagtatttt
     9901 taggagctta ttccccagag tctatgggtg attatgcaag tgggacaaat catgttttac
     9961 ctacttatgg acttactaaa acgcattcta gtttaggttt ggcagatttt agtaaaagaa
    10021 tgaccgttca agagttaagt aaagaaggtt ttttagcttt aggtaaaagt gttgaaattt
    10081 tagcacaaaa tgagcattta gatgcgcaca aaaatgcagt aacttttcgt ttagagagct
    10141 taaaatgagt caaaaaatcc tttttataga tagagatggc actttaatag aggagccaaa
    10201 aagcgatttt caaatcgata ctcttgaaaa attgcgtttt gaaaaagatg ctattcccac
    10261 tcttttaaaa ctaaaaaaat ttggatttaa atttgttatg gtaagcaatc aagacggtct
    10321 tggaacacca agttttccaa aggaaaattt tgaaatcgct catgaaaaaa tgcttgatat
    10381 tttaaaaagt tgcggtatag aatttcaaga tatttttatt tgtccgcatt ttgaaaatga
    10441 aaattgtgct tgcagaaaac ctaaaaccgc tatgttagaa gagtatatca aacacgaact
    10501 ttatgataag gagcaaagtt ttgttatagg agatcgtgag agtgatatga tcttggcttc
    10561 aaatttaggc gtgcgtggtt taaaatacgg cgaactttct tggaaagaaa tagaaaatga
    10621 aattttaagt tcttttagaa gcgcgagtta tcaaagaact actaaagaaa cagatataaa
    10681 agtaaaggta tgcttaaatg ggggtaaggt tagcattaaa acaggtattg atttttttga
    10741 tcacatgtta gagcaaatcg ctgtacatgg aggtataggg cttgaaattt cttgtaaagg
    10801 agatttggaa atcgatgagc atcatagcgt tgaagatgta gccttagcac ttggagcttg
    10861 tatcaaaaaa gctttagggg ataaaatcgg tattgcaaga tatggttttg ctttacctat
    10921 ggatgagtgt ttggcaagtt gtgcgatgga tttttgcaat cgtccccatt tagtctataa
    10981 agccaaattt aaaaaatctc atttaggggc tttaagcaca gaaatgatcg agcacttttt
    11041 ttattcttta agctatgcta tgggcgtgag tttgcattta aaagttaaag gcaaaaacga
    11101 tcatcataaa gccgaagggc tttttaaagc ctttgcaaaa gctttgaaaa tggcagtaaa
    11161 aatagaaagt gaaaatttag ccagctctaa aggagtgata tgaaaatcat catcatcgat
    11221 acagcctgtg cgaatttagc atctttgaaa ttttgtctag atagattagg ttttaatgca
    11281 actatcagta gggatttaaa agaacttgaa agtgcggata agcttttttt acctggagtg
    11341 ggtaccgcaa aagaagcaat gaaaaattta gaacaattta atcttattga ttttattcaa
    11401 aataccaaaa aacctttgct tggtatttgt ttaggtatgc aaattttagg aaatttttct
    11461 gaagaattaa atcaagaaac cttaaaactc atagatttta caactcaaaa atttaaagct
    11521 aaagaaggct ttacttttcc acatatggga tggaatgaag tttatagctc tcatgctttg
    11581 tttaaaggct tagaaggggc ttatttttat tttgtgcata gttattgtgt aggacttggg
    11641 aaatacacta tagcagattg tgagtattcg caaaaattta gcgcaagcgt aatgaaagat
    11701 aatttttacg gagtgcaatt tcaccctgaa agaagtagcg aggctgggga aattttaatt
    11761 tcaaatttta ttaaggatat aggatgactc aaatcatacc cgcactcgat cttatagatg
    11821 gcgaagtggt gcgtcttgta aaaggggatt acgaacaaaa aaaagtatat aaatacaatc
    11881 ccttaaagaa atttaaagaa tacgaaaaag caggagcgaa agaacttcat cttgtagatc
    11941 ttacaggtgc aaaagatcct agcaaaagac aatttgcttt gatagaaaaa ttagccaaag
    12001 aagtcagtgt caatttgcaa gtaggtggag gtatacgctc taaagcagaa gttagagctt
    12061 tgcttgattg tggagtaaaa agagtagtta taggatctat ggcaattaaa gatgcgactt
    12121 tatgtcttga aattttaaaa gaatttggta gtgaagctat agttttagcc ttagatacga
    12181 ttttaaaaga agattatgtt gtggctgtaa atgcttggca agaagcaagc gataaaaagc
    12241 ttatggaagt tttagatttt tatagcaata aaggcttaaa acacatactt tgcacagata
    12301 tttcaaaaga tggcaccatg caaggagtaa atgcaagact ttataaactt atccatgaaa
    12361 tttttcctca tatttgcatt caggcaagtg gtggagtagc aagcttaaaa gaccttgaaa
    12421 acttaaaagg aatttgtagt ggggttatcg taggaaaagc tttattagac ggagttttta
    12481 gtgtagaaga agggataaga tgtctagcaa attaagctac aaagaactta ctttagaaat
    12541 tttaaaacaa agtgacagac ctttaagtgt taatgaaatt tggcaaaaag ctcttgaaca
    12601 aggcttagat aaaaagcttt ctagcatagg acaaactcca attgctactt taggggctag
    12661 gatatatgtt gatataaaag aattgcaaca caattcttta tttatcaaag cttcccaaaa
    12721 acctacaact ttttggctaa aagaaagaga aaatgaactt ttaaagcttg ataataaaaa
    12781 tgaaattacc aatgaaaaac aagaaaaaaa taaatttcat gaaagagatt tacacccctt
    12841 gcttgtaaaa tttttatatg aaaatttaga ttttaattta aattgcaaaa caatttacca
    12901 tgaacaaagc aaaaagggta aaggtgggga agataagtgg aattatcctg atattgtagg
    12961 ggtttatttt ccttatgatg attatgaaaa agaaaccata acacttttag aaaatatcaa
    13021 acaaaacagc tataaacttt tttcttttga acttaaaatt gctttaaatt tttcaaattt
    13081 aaaagaatgc tattttcaag ctgtaagtaa ttctagctgg gcaaatgaag gctatttggt
    13141 tgttttacaa gaaattgata gcgaagtttt aagcgagtta agacgcttaa atcaaagttt
    13201 tggcatagga gtgataaaac ttgaaaaaga tatttcaaat tctcaaattt taattagcgc
    13261 aaaagaaaaa gaacttgata ttcaaacact aaatatgctg atcaataaaa atccaaattt
    13321 taaagaattt attgatgata taaacaaaca aattaaagtg ggcaaagaag caaaaattca
    13381 aactaatttt gatgaaatta aaagcgatga agaaatggaa aaatatctta aagaaaaatg
    13441 tattttggag aaataaatgc ttacaaaacg cataattgca tgtttagatg tcaaagatgg
    13501 cagagtagta aaaggaacac aatttaaaaa ccataaagat atgggagata tcatagagct
    13561 tgctaggtat tattctcaaa atggtattga tgagcttgtt ttttatgata ttgctgcaag
    13621 tgctagaaaa gaacgcatat caagagaatg ggtaagtgaa gtagcaaaaa atatcaatat
    13681 tcctttttgt gttgcagggg gtattaaaag cgaagaagat gcagctgaac ttttggctaa
    13741 tggggcagat aaaatttcta tcaattcccc tgctttaaat gatccaagtt taatcacacg
    13801 ccttgctaaa agctttggcg tgcaatgcgt agtagtaggg attgatagtt ttaaagatga
    13861 aaatggaaat ttaaaagtat ttcaatacac aggcgatgaa aaaacaagta aacatagtgg
    13921 aaaaagcact ttagaatggg ttaaaaaagt gcaagatcta ggtgcaggcg aaattgtttt
    13981 aaatatgatg aatcaagatg gtgttaaaaa tggctatgat ttagaacaat tagaagctgt
    14041 atataaaatt tgtaaagtac ctttgatcgc aagtggggga gcgggaaaaa tggagcattt
    14101 tttaaaagct tttaaactag gtatagatgg ggctttagct gcttctgttt ttcatcaaaa
    14161 acttatggac attaaagaat taaaaattta tcttaaaaat caaggcttaa gtataaggat
    14221 ataatatgca aaatttcaaa gaacttaatg aaaaaattgc ttggcaaaaa gtggatcatc
    14281 ttttacctgt catcatccaa gatgcaaaaa cttgtgaagt tttaatgcta ggctttatga
    14341 ataatgaagc cttagaaaaa agcttagaaa gtggcaaagt agtctttttt tcacgcacaa
    14401 aacagcgtct ttggatgaag ggtgaagaaa gtggaaattt cttaaatatc gtagatttaa
    14461 gcttagattg tgataatgac acgcttttaa ttttagcaaa tcctgtagga cctacttgtc
    14521 atacgggcga tatttcttgt tttgaaaaaa tttctaaaaa tgcggatttt gtttttctag
    14581 ccagacttga aaaacttatc aattcacgca aaaatgccga tgaaaatact tcttatacag
    14641 caaaactttt caaaagtggc acaaaacgca tcgcacaaaa agttggtgaa gaaggcgtag
    14701 aaacagcttt agcagcgaca gtaaaagata aagaagagct tatttgtgaa gcagcggatt
    14761 taatgtatca tttaagtgtt ttacttgcag atgcaaatct tagtttctca gatgtgattt
    14821 caaagttgaa agaaagacat aaagcttaaa gctttatgta aaataaattt atatcaatgc
    14881 aaggcttcat taagtttgac tgctttttta tttaaagcca ctatcatagc accacttata
    14941 gaatcttgac ggaaatgtag gccatttaaa cctttaagct ctaagccttt gtaaatttct
    15001 ttatcaaaat taaaataagg attaagttta gcaagttcct cagcatcttt gagtaaaaat
    15061 ttcgttcctt ctagcactgc aatacctgca tcaactatac aattatcccc taaaggaatt
    15121 cctgtcactg aattagcccc taaaagacaa gccttgccta cgcttatagc attgccactt
    15181 gttccactta aaacacctaa aatcgaagct ccgccaccta catcagaacc ttctcctact
    15241 atagcacttg aactaatacg cccttcaacc atacaagctc ctgttgtacc tgcattaaaa
    15301 ttcacataac ttgcccctgg catgatggtt gttcctgctg ctaaagacgc acccattctt
    15361 actttagaac tttctaaaat tcttgtatta tcctcaggga taatatgtgc taaaaatctt
    15421 gggaatttat caacaaaatc gatttttgga tattgattgc tcatttttaa acgcatttca
    15481 tttactctta aatactcaag ctcgataggc ttatcatcac tccaagctac attgcttaaa
    15541 agtccaaaag ctccatttaa attgatactt cttaaaggta cttttttagt agaaagcaaa
    15601 taaagtttta gataaatact ttctacactt aaaggttctt tatcttcaaa aagacaaaca
    15661 aaagaaaatt catcatcttt aaatttatct ttgataatct ttaataaatc aatattttga
    15721 tgcccatctt cttctaaaaa aggtttaaaa caagaaagtg caaaatcaat atcttctaat
    15781 ttcaaagttt gcacaaactc actcgcatta aaatcaatct ctacgcccct ttgcataaaa
    15841 gcttcaagca taattgccgc tgagccaaaa ttttgctcat aattaatcaa agcaaaactt
    15901 gcttgcaaga ttttattttt atttagctgc cctctatcaa gccttgctat accaaaagct
    15961 ttaggttttt tataaccact tttttgctca atttgtttga ttaaaagtaa aaaatcttct
    16021 ttagtattaa tcattttctt ttccttatcc acttaatttt taatgcgaac acgcactttt
    16081 tccattcatc acaggttgta tagcagaatt atccgcaccg ccttcattgt taatcttttc
    16141 tataaaactc caaatttttt cggccgccat taaataacgc cttgaactca cactttcagg
    16201 gtgataaaaa ctcacaggtt tgccttcatc tccaccttct cttactatca tttctatagg
    16261 aatttgtgct aaaacttcac ttttataggc ttttgccata tcttcagctg ttcctttacc
    16321 aaaaatatca tactctttac cattatcagg acataaaaat ccactcatat tttcaatcac
    16381 acccgctata ggaatatgaa gtttattaaa catatctaaa gctcttttgc tatcgtctaa
    16441 agatacggtt tgaggcgtgc ttacacaaac tcctgcagta ataggaatac tttgcgcaga
    16501 agtaatttgt gcatcgcctg ttcctggggg catatctaaa aacaatacat caagttcagg
    16561 ccaaatcaca tcagctaaaa gttgctcgat tgctttcata atcatagctc cacgccacat
    16621 aaggccttga ccctcttcga tcaaaacccc catactcatc atataaacac catgagttaa
    16681 aataggcttt aatctctgcc ctactacttc aggctgagtt ttggtttcac ctagcattct
    16741 tggaatattt ggcccataaa tatccgcgtc taaaatacct actctttttc ccattttagc
    16801 catggaaatt gctaaattta ctgtagttgt agatttaccc acaccacctt ttccacttga
    16861 aaccatgatg aaatttttta cttgtggagc gatatttttt ccacttcttg aattactttt
    16921 ttcttcagga atttttggag taatgatatt aagttcaata ttttttaaag ccaaactcga
    16981 taaagcttca atagtatttt tacgaatttc attagctact tcaggatttg ctgaaacgat
    17041 ttctatatca atgaatacac catcatcttg aattttaata tcttttacaa agttaaaact
    17101 cactatatcc ttttcaaaac caggatattt tacagttttt aatttctcta aaatttgttc
    17161 ttccatattt tttccttgtc ttttaaaaaa atcaatttta ctaataaaat gataaaattt
    17221 agctttttat aagtgtataa tatggtaaca ttataaaaac caacaatatt aaaaagagga
    17281 atgaaaaaat gagtgaaatg agcctcatta tgttagcagc tggaaattct actcgtttta
    17341 atacaaaggt aaaaaaacaa tttttacgac ttggaaatga ccctctttgg ctttatgcaa
    17401 caaaaaattt aagctctttt tatcctttta aaaaaatagt tgttacctct agtaatatca
    17461 cttatatgaa aaaatttact aaaaactatg aattcataga aggtggtgat accagagcag
    17521 aatccttaaa aaaagcctta gagctcatag atagcgaatt tgttatggta agtgatgtag
    17581 caagggtatt ggtgagtaaa aatttgtttg atcgtttgat tgaaaattta gataaagcag
    17641 attgtattac ccctgcttta aaagttgcag atacaacact ttttgacaat gaagccttgc
    17701 aaagagaaaa aatcaaactc attcaaaccc cgcaaatttc taaaaccaaa ttgcttaaaa
    17761 aagccttgga tcaaaaccta gaatttacag atgatagcac agctatagct gcaatgggtg
    17821 gaaaaatttg gtttattgaa ggtgaagaaa atgcaagaaa actaaccttt aaagaagatc
    17881 ttaaaaaact tgatttgcct acacctagct ttgaaatttt tactggcaat ggttttgatg
    17941 tgcatgaatt tggagagaat cgccctttgc ttttagcagg agtgcaaatt catcctacta
    18001 tggggcttaa agcacacagc gatggagatg ttttagctca ctctttaacc gatgcgattt
    18061 taggtgctgc aggacttgga gatataggag agctttatcc tgatactgat atgaaattta
    18121 aaaatgccaa ctccatggag cttttaaaac aagcttatga taaagtcaga gaaataggtt
    18181 ttgaactcat taatatagac atttgcgtca tggcacaaag ccctaaactt aaagacttta
    18241 aacaagctat gcaaagcaat atagctcata ctttagattt agatgaattt agaatcaatg
    18301 ttaaagccac aacaacggaa aaattgggtt ttattggaag aaaagaaggt atggcggtgc
    18361 ttagtagtgt aaatttaaaa tattttgatt ggacaagatt atgaaagttt taattattga
    18421 aaatgaaatt tatctagcgc aaagcattag cattaaacta agtgatgctg gatatagctg
    18481 tgaaattatc aactcgtttg atgaatacaa tggtgaaaaa tactatgata ttgtactgct
    18541 ttctacaaat actaataatt ttctaaaagc cgtaggtcag tttaaacata gtattattat
    18601 tttgcttatt tcttatataa gtacagatac agtttcaaat cctttgaaat taggtgctag
    18661 tgattatatt caaaaaccct ttatgataga agagctgatt agaaaaataa agcattatca
    18721 ggattttaga aaactttcaa tccttaataa agcttatcaa agctatatca aatcaagatt
    18781 agaaacaatc aaaattccag agtataatta taaaaaatta aaacttccat tgatattaaa
    18841 atccaacaag caaagcagtg ctgatgcttt tgtttttaat tatgcaaatg aatgtgacat
    18901 tactctttct tttattgatt taacatctac aaattcagtt gaaaaagtta tgaaacttcc
    18961 cacagaaaat aatcttttat ttttgagtaa ttttcaagca ttaaaagcag cagaaaagga
    19021 aaaactccta gattttatac aaaacaaaaa tgttattttg cataccaatt caaatacaga
    19081 tgatttaaaa ataaactgca ttaatttaaa tgataatgaa aaaaatatca atagcaatga
    19141 aattttaact atagatgagt atgtaaaata tgttattata aattaccaaa atatatttcc
    19201 tgatactgat ctttcaaaaa aattaggcat ttcacgtaaa tctttatggg aaaaaaggaa
    19261 gaaatatgaa atcagcaaga aaaaataaaa acattaccat agatcaaaat gaatttggca
    19321 tcttgtcact tattaaagaa ggtttgctag gtacttgcac tcatttaatg aatgaaaaag
    19381 aagtcaatga aatcattaaa tcaggaaaat ttaaaggaga aagttttccc tatcccttaa
    19441 gctttgcacc aaaaaatgct gaagaagcac taaatgatat aaaatctggc gatagaatcg
    19501 atctcatact agatgaaaaa gtagtaggac atatagattt taaaagccaa tttaaaaata
    19561 ataaaaattt ttctgatatt ttcagtccta acacttgctc tttagaagac atgggaacaa
    19621 cttgcataag tggaaaaata gaaatttata attctcaaat tgaaaaaata aaagaaaatt
    19681 ttcaacaaat caaaaacaat cttaatgcac aaaaaattac tgctatagtt tcaagttttg
    19741 atcctttgca tcgtgcccat gaaagaatgt ttcgttggac tattgataaa gcagatttag
    19801 ttgtaatttt tcttgtagaa tcttttgatg taaatgggtt tgaattcgaa cttaaagaag
    19861 catatttgaa aaaatttatt caaaactatc ttccaccgga tagaattttc atttttccat
    19921 taaaaaatat taatattttt cacgctcatt taaatcctgg cttagaaagt attatcgcaa
    19981 aaagtctagg ttgtaccaaa ctagtagtag gacaaaatca tacaggactt ggaatgtttt
    20041 atgacgataa ccaaccaaaa accatacttg atgatttttc caaggactat ggcatagaag
    20101 tgatcgtttt gcctgaattt gtattttgcg atcaatgtcg catgattgtt agcacaagat
    20161 cttgccctca tggttgtcat caccatttgc actataattc tcagtcttta aaagatttat
    20221 taagagcggg tatcattcct ccagcaattt tcatgcgcaa ggaagtatct agtgttattt
    20281 taacttctct ttttccaaat agattaaaaa atatgcaaaa aatttataat gagctttttc
    20341 caactgatgg aattttagaa tacaaaaatg atgaagaatt ttatcaaaaa cttttagaaa
    20401 ttcatcaaat gtcttatatg gtgtaataaa atgcaaaaat tatttttaac ttttttttat
    20461 tcaggttctg taaaaaaggc aagtgggact tttggtacta tcgctgcttt aatacctgct
    20521 ttttttatac ttaaatatct cgggattaat actttgtttt tactaagcat tttaattttt
    20581 gttgcaagta ttcgtgttat agatgattat gaaaaaaaaa caggaattca cgatgacaaa
    20641 cacatagtta tcgatgaggt tgctggagtt tttcttgctt gtgctattgc agcaagtgtt
    20701 gaaaactcga tagtcaattt tattttggct tttgttttat tcagactctt tgacattaca
    20761 aaaccttcta ttattggtaa gatagataaa aaagtcaaag gcggactagg tgtaatgctt
    20821 gatgatatgt tagcaggatt gtttgctgga cttttaagtg cggtaattta tggattttta
    20881 cttaaattta atttagtttt ttgggatata aatttaaaag acttattttg aaattttgct
    20941 taaattaatt aaattttaaa ttttattctt atataattta gtctttaatt tcaaaaaagg
    21001 aaaatataaa tggcaaacca taaatctgct gaaaaaagag caagacaaac tattaaaaaa
    21061 acagaaagaa atagattcta tagaacaaga cttaaaaata taactaaagc cgtaagagaa
    21121 gctgcagcaa atggagataa aaatgctgct aatgaagctt taaaagtagc taataaaagc
    21181 attcatgcta tggtaagtcg cggtttcatt aaaaaacaaa ctgcttctcg ccgtgtaagc
    21241 cgcttagccc ttttagtaaa taaaatcgca taattttcta tatagttttt aatgttagct
    21301 agcaaactag atcctttttt aagacgcttt gaagagttaa attctcttct tagcagttct
    21361 gatataatca acgatatcag taaaatgact acactctcta aagaacaaaa aaatttagaa
    21421 cctatcgttt taaaagttaa agagtattta aaaactttag acaatataga agaaaataaa
    21481 gctttgctaa acgatccaga acttggggaa cttgcgaaag aagaactaaa aactttagaa
    21541 gaattaaaac caaagcttga agaagaaatt aaaattttac ttcttcctaa ggatcccaat
    21601 gatgaaagaa atatttttct tgaaattcgt gcaggcacag gtggcgatga ggcatcttta
    21661 tttgtaggag atcttgtaaa agcttatgca agatatgctg aaaatcgtgg ctataaactt
    21721 gagattgtaa gttctagtga aggaagtgta ggtggattta aagaaatcat catgcttgtt
    21781 aaaggaacag gagcttattc aagacttaaa tatgaaggtg gaacgcaccg tgttcaaaga
    21841 gttcctcaaa cagaatccca aggacgcgtg catacttctg ctatcaccgt ggcagtaatg
    21901 ccagaagttg atgatataga aatcgaaatc aatccaaacg atcttaaagt tgatgttatg
    21961 cgatcttcag gacatggtgg acaaagtgta aatactactg attcagctgt tcgtatcact
    22021 catatcccta caggtatagt tgtagtcaat caagatggaa aaagccaaca caaaaataaa
    22081 gaaagtgcga tgaaagtcct aaaagcaagg ctttatgaaa tgcaagagag tgaaagactg
    22141 gcaaaagaaa gtgaagcaag aaaatcacaa gtaggaagcg gagatagaag tgaacgcatt
    22201 cgcacttaca attttccaca aaatcgtatc agcgatcata gaataaatct tactttatat
    22261 cgcttagatg ccattatgca agatgggctt tttgatgaaa tcatagaacc tttaatcact
    22321 catcatcaag cccaagcttt acaagaacaa aatttataag attttatata aattaatact
    22381 tatgtaggaa tttatgtgga tttccactag cacctacatg tgcaacattt ccattttcta
    22441 tatcataagc ttgaccaaaa ccttttacaa agcgtccttt tttaaattca agctttacta
    22501 gatgaaaatc aagcatcttg cgtatagttt taatgcctcc ttctcctccg gtttgttttt
    22561 caaactcatt ataaatttga tcaaatcttt cacctctctc taaaaagctt gcatttactc
    22621 tatagcgcaa tcttttgcga agtataacag aagcagcttt actctcatcc tctaaaaaca
    22681 ttatttctat attgtttgga tttactttga tgttgttaaa atgttcactt acttcactta
    22741 tataaatata atttccccat tgtgtgctta caaaaggtgc atacgagcaa acaacttctc
    22801 catttgcatt taaagttgcc aaagctacag aattaaaact tagcataaat tcatttaatt
    22861 ctttttctac gccactaaaa ttttgctcgc tctttgcact catgcaaagg gatattatag
    22921 tatctttaat cgtgttttca tcggcttttt taggaaattc cactcgtaaa ttttctttat
    22981 cattgtaaac aagatccaag ccattaaaat caacactttt tagaaaaaca tcttgcactt
    23041 gctcaatacc accaaatttt ttacaaagat caactaaatt tgatttatga tgatcattca
    23101 tatgagaaat aatgctttca aaattcattt ttatcctttc ttgattttaa aataaaatat
    23161 taaaaaaaat ggtatc
//
LOCUS       DAPIWB010000021        23119 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.022, whole genome shotgun sequence.
ACCESSION   DAPIWB010000021 DAPIWB010000000
VERSION     DAPIWB010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23119)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23119)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23119
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.022"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..213)
                     /locus_tag="RJ266_000676"
     CDS             complement(<1..213)
                     /locus_tag="RJ266_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDV7354451.1"
                     /translation="MGFRINTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADD
                     ASGMAIADSLRSQANTLGQAISNGNDA"
     gene            complement(310..2127)
                     /locus_tag="RJ266_000677"
     CDS             complement(310..2127)
                     /locus_tag="RJ266_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7354452.1"
                     /translation="MTLLEKNIQALLSGVNEPLGNKLLNFIQNKTCSRFNIDENLNIF
                     DKTHNVFMYENLEEEINFFYQSILEKTPRYPFICIYGIGNALLIKNLAKHYKHLFVFE
                     SEIELFILALSTIDLSEELCSGKIYLVDIEEERVDIQLLILFDMKDMFEYLSLYEMFV
                     NNVYYKKFYEDVWHKADELCEKNIKVVIRNLNSSLCIGFECYSHLLQNIPSMLESIPF
                     QRILSERKNKFENAIVVSAGPSLAKQLPLLKAYQDKAVIFCADGALSMLEKEGIIPDY
                     VTNLDFTDLAMKFFQNKENLKQSIIALECATHPNVARSLKAENCMIILRNKALYQRFN
                     LNDFGYIDTGTHVSHFSYTLALALGFKNIIMIGQDLAFDEEGNSHSKGFDFGEKFSGE
                     ENIDKLKVTAYAGKGEVLTHITWNDYRIKLEYLFACNEQKAKFYNATEGGARINFTEE
                     LSFKECCEKLLTKEKPQFELPKSLTKNRSDKLLVKFKEKIQKDQDNAKRFLDDALALK
                     QILENILSKDFILPLEFLEKVYQNIENFNHSLDEDEFIQDETLRGAFAYRGKLISDVL
                     KLHIQDKTHFITAYIKAYHEWLLYFMEKLEQKYKSLSKV"
     gene            complement(2137..3379)
                     /locus_tag="RJ266_000678"
                     /pseudo
     CDS             complement(2137..3379)
                     /locus_tag="RJ266_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344730.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
     gene            complement(3379..3894)
                     /locus_tag="RJ266_000679"
     CDS             complement(3379..3894)
                     /locus_tag="RJ266_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDV7354453.1"
                     /translation="MRKAFTILELVFVIVILGILAAIALPKMSSSKDEAEISKSLNNL
                     KTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLGNFNGTKEVNFRVGDDKECLKLVF
                     IDRADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
                     ASKTYLLIGEM"
     gene            complement(3895..4902)
                     /gene="tsaD"
                     /locus_tag="RJ266_000680"
     CDS             complement(3895..4902)
                     /gene="tsaD"
                     /locus_tag="RJ266_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HDV7354454.1"
                     /translation="MKNLILAIESSCDDSSIAIIDKNTLECKFHKKISQELDHSIYGG
                     VVPELAARLHSEALPKILTQCKEHFKNLCAIAVTNEPGLSVSLLSGISMAKTLASALN
                     LPLIPINHLKGHIYSLFLEEKISLDRGILLVSGGHTMVLYLKDDANLELLASTNDDSF
                     GESFDKVAKMMNLGYPGGVIIENLAKNAKLKNISFNTPLKHSKELAFSFSGLKNAVRL
                     EILKHKNLSDDIKAEIAYAFENTACDHIMDKLEKIFNLYKFKNFGVVGGASANLNLRS
                     RLQNLCQKYNANLKLAPLKFCSDNALMIARAAVDAYEKKEFVSVEEDILSPKNKNFSR
                     I"
     gene            complement(4899..6293)
                     /locus_tag="RJ266_000681"
     CDS             complement(4899..6293)
                     /locus_tag="RJ266_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deacylase"
                     /protein_id="HDV7354455.1"
                     /translation="MKFFLTILFFITSIFALELDFSVGENGKSLDDNNTVLIFGGIQG
                     DEPGGFHAASLLLSDYNITKGKIIVAPNLAFDSIIKRSRGNNGDLNRKFASISPKDPD
                     YKTVQRIKELILLPEVSMVINLHDGWGFYKPTYIDAMQNPKRWGNSSVIDTSEINASK
                     YPDLENIATQTVNSVNSSLADPKHAYHLKNTKTQELGDMEMLKALTYFVISNHKAAFA
                     NEASKNLPVNLRAYYHLLAIENYLKTAGIEFSRDFELTPQGVDKVINKELEVKLFDDR
                     ILLSLKNPRKLINYVPFPVNKELNYNTSNELTAIIAEGNSFYIQYGNRFQTRLYPEYL
                     EFSDAFNEVTFQVDGNETTVPFGTKVKVKENFLIPKIANVRVNIIGFDHSKDESGILV
                     HKKNMQTQYSLDMAGKIYRVEFYELRGANLQQLLEANTNSKLIKNAKNLDLNTLKMAR
                     SKDKFLGSILVEFE"
     gene            complement(6295..7365)
                     /locus_tag="RJ266_000682"
     CDS             complement(6295..7365)
                     /locus_tag="RJ266_000682"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HDV7354456.1"
                     /translation="MILFGSTGSIGVNALKLAALKNIPISALACGDNIALLNEQIARF
                     KPKFVAIKDSKNKHLVKHDRVFIGQEGLEQILTECQDKLLLNAIVGFAGLKSTLKAKE
                     LGKNIALANKESLVVAGSFLKGAKFLPVDSEHAALKFLLEGKKNIAKLYITASGGAFY
                     RYKIKDLNQVSVKDALKHPNWNMGAKITIDSATMANKLFEIIEAYHLYDFKEIDALIE
                     PRSLVHAMCEFKNGASTAYFSKADMKLAISDAIFEKQDTPILEAVDFSKMPALKFHPI
                     STKKYPIFKLKNTFLKEPNLGVIINAANEVGVYNFLENKSGFLGITKCIFKALDHFGV
                     PKISSIEEVFEYDFKTREYLRS"
     gene            complement(7362..8087)
                     /locus_tag="RJ266_000683"
     CDS             complement(7362..8087)
                     /locus_tag="RJ266_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HDV7354457.1"
                     /translation="MFNTTRIISALVMIGAIIIIALIDQFFINFIVFAVLLYLSFSEA
                     KKLFALENISIIPLAIAFILGSLSHKALLFGILALLLVVGYLVYKKASLKPALIYIYP
                     SLPILALWQVYLDQGMFALFWLIIIVAACDSGAYFIGKLMGKTPFSPTSPNKTLEGVI
                     GGLICASVIGTILGIFVYSFWLSLLCSFFVAIFAVIGDLLESYFKREAGVKDSGDLIP
                     GHGGVLDRIDAVIIAAFVMVALL"
     gene            complement(8096..8434)
                     /locus_tag="RJ266_000684"
     CDS             complement(8096..8434)
                     /locus_tag="RJ266_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354458.1"
                     /translation="MPVSPLGNINYINQNMAYPATQASNELAKEGFAATLNMAEFNEK
                     EKTLNKLEKVNETHEIKEEIKEKAEQEEKKKKHNQEAKTSDDEKNEEDESKDPNFKDA
                     QSIHRLDISI"
     gene            complement(8436..9743)
                     /locus_tag="RJ266_000685"
     CDS             complement(8436..9743)
                     /locus_tag="RJ266_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NFACT family protein"
                     /protein_id="HDV7354459.1"
                     /translation="MKYTELLQLQTFFSQFKKIDFIKRINDNILELSFDRERFIFDLT
                     RAMSAIYTAKFNAKNYNAPFDFMLKKYFSNAFIKEVKVLEGNRILCFSVKANKAYKSY
                     ESKIYFEFTGKNTNVILTDEKDLIIEALRHIDKSYRVVKPNVILESLKPYKMDENFEE
                     IKDFADYFSRKFTSIYESKIKQIKNLKLAQVDKKIQNLQELFSSLDEENSLLLKALEY
                     RKRADVLFANLSVLKDYEREFKLDDFEGKELEFKLEFSPKQSANLYYKNAKKLEQKAK
                     NLNIQRQNLKEKLDFTLSLKELLLQAKSEIELEILLPKKNSKKNQDYKQEDLVAHFYY
                     NEFKICVGKNEKGNEFLLKNAKKDDLWLHVRDIPSAHTLIVSNKQKISLDVIEFAARL
                     CVSFSKLKKGSYWVDYTLKNFVKVQQKAFVNYTNFKSINITKD"
     gene            9806..10381
                     /locus_tag="RJ266_000686"
     CDS             9806..10381
                     /locus_tag="RJ266_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HDV7354460.1"
                     /translation="MQLNELNCVILCGGKSSRMGQDKSKLILKNQNLTQFQVNKFSKI
                     FKNVYVSAKEDKFENHFSLIKDSLEFEVYSPMLALYSILSNFKNEFVFVLSVDSPKVG
                     KNELLKMLPFLEQNYKIIIAKTPLHKHPLCGFYHSSLAQTCKNFLEKNEQKIGLLFSE
                     IKTKFVEFEDEDAFLNLNFYEEYEKFKSELR"
     gene            10378..11367
                     /locus_tag="RJ266_000687"
     CDS             10378..11367
                     /locus_tag="RJ266_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HDV7354461.1"
                     /translation="MRKIALFLSLCVFIWASDLQQALEYEKQGDYKKAMEIYKKLSLK
                     NSPVLISQEQNNSSQATQTQNSITIKKEEKQDFSRLALANYLGENESFNPLGISSYKM
                     NYFLPFAYSFNSLGVNNNKSEAKFQLSVKKRLFENLLGLDEKYYIAYTQTSWWQIYEH
                     SSPFRETNYQPEFFIDLPLYLKDYEFFNNLRVGILHESNGKGDENLQSRSWNRIYVST
                     AILYNKFLFVPRLWYRIPENKKDDDNPAILHYMGNFDMNLAYLGDDYFINLMLRNNLK
                     FHNNKGAIQVDLGYDIFNNGIYWYLQYFNGYGESLIDYNKHLQRLSTGFLISY"
     gene            11453..12421
                     /locus_tag="RJ266_000688"
     CDS             11453..12421
                     /locus_tag="RJ266_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7354462.1"
                     /translation="MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQL
                     EIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKFVSPTTAGTMDCAKFGILISLIF
                     FTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
                     YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNL
                     GISYNGILFLGLMIVSIITSLVIVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALC
                     GALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKVYA"
     gene            12414..13352
                     /locus_tag="RJ266_000689"
     CDS             12414..13352
                     /locus_tag="RJ266_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HDV7354463.1"
                     /translation="MRKKMLILSFLTLNMIGIFIFVGLNGFDEYALKSRFLQIAAIII
                     VAICIAVSTVIFQTLCNNKILTPAIIGLDSLYMLLQSALIFSFGAANLSVYKNDINFL
                     ITLVCMVVFSLELYKILFSSDRSIYLIMLLGLVFGTLFSTLSSFFEVLIDPDEFMVIQ
                     GRMFASFDNIAFDVLILAYIISFLSFIWIFRYMKFLDPLNLGKDLAINLGINYQKISK
                     QLMIIIAILTSISTALVGPITFLGLLVVNITYELFKTAKHSILLSACILISILALLGG
                     VFFVSRVFDYNATISMVINFLGGIYFIYLVLKGNKL"
     gene            13349..14104
                     /locus_tag="RJ266_000690"
     CDS             13349..14104
                     /locus_tag="RJ266_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7354464.1"
                     /translation="MIKLKNITKFYDNKVIISDLSLDFHKGKITSIIGANGAGKSTLL
                     ALASRLIKPSSGEIYIDGMNLKNYKEQILAQKISILKQQNNINLRLKVEELVAFGRFP
                     HSQGRLNTNDKIKINEALEYMELSNLRNEFLDTLSGGQKQRAFIAMIIAQDTEFIMFD
                     EPLNNLDMKHSVQIMQLMKNLVKDFNKSIAVVLHDINFASIYSDEIIALKDGKLLKQG
                     SKDEIINQENLKQIYDMDIPVSQIDGKKICIYF"
     gene            14117..15109
                     /gene="ceuB"
                     /locus_tag="RJ266_000691"
     CDS             14117..15109
                     /gene="ceuB"
                     /locus_tag="RJ266_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterochelin ABC transporter substrate-binding
                     protein CeuB"
                     /protein_id="HDV7354465.1"
                     /translation="MKKSLVFAFFAFFLSLILTACNSNSNENNASSTTKTNTATVKVL
                     PISMSDEGDSFLVKDSLGENKIPKNPSKVVILDLGILDTFDALKLNDRVAGVPAKNLP
                     KYLQQFKNKPSVGGVQQVDFEAINALKPDLIIISGRQSKFYDKLKEIAPTLFVGLDNA
                     NFLSSFENNVLSVAKLYGLEKEALEKISDIKNEIEKAKSIVDEDKKALIILTNSNKIS
                     AFGPQSRFGIIHDVLGINAVDENIKVGTHGKSINSEFILEKNPDYIFVIDRNIIVGNK
                     ERAQGILDNALVAKTKATQNKKIIYLDPEYWYLASGNGLESLKTMILEIKNAVK"
     gene            complement(15182..15271)
                     /locus_tag="RJ266_000692"
     tRNA            complement(15182..15271)
                     /locus_tag="RJ266_000692"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(15235..15237),aa:Ser,seq:gct)
     gene            complement(15335..15889)
                     /locus_tag="RJ266_000693"
     CDS             complement(15335..15889)
                     /locus_tag="RJ266_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354466.1"
                     /translation="MINKNKLFRQVHIYLSLFFLPCALLFALTGIAYIFGINQDVGLK
                     VEQYQLSKVIESGKEREALIEFLKTNGLKVPSNTDIIKSKDKGITIGGTHYSANITQK
                     STNEYNITLKIRSLLGDMIMLHKDKGAWYFSVLSVGFGITLFMLYISGLMITLFANKK
                     DRSKQFAVLGVGVVVTLLLAYLSL"
     gene            complement(16023..17855)
                     /locus_tag="RJ266_000694"
     CDS             complement(16023..17855)
                     /locus_tag="RJ266_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming cytochrome c nitrite reductase
                     subunit c552"
                     /protein_id="HDV7354467.1"
                     /translation="MKKNILRLGIVVLVLLIAGVLWLNNDINQKKEDEANKNAIAANA
                     DFSLLSDDDPNFEKWGKVFPEQLKMYLTVEKEEPKATEFGGNLAYSKLIRFPQLTILW
                     AGYPFSLDFNEERGHFWVQVDQMKTARNNKDFLNAHGLAAFKGQPAACMNCHSGWTPW
                     LIKNVAKGDFIAFNSTNYWTMIKNIPAVDGIVENSPEHAGPHGGKRMGVTCADCHNPN
                     DMSLRLTRPAAINALVSRGYEKDPVQGVKATREEMRTLVCSQCHVEYYFKPTGEKVKV
                     MGETIVDDSSKKWWNGTQKNYDEYEFWRDGNKAKEIETDGIVLTFPWSEWKKGQPFRI
                     EMLDDYYDKVRGVFGADFTHKLTGAQIIKIQHPESELYSGGVHAANGVSCVDCHMPYV
                     REGAKKVTQHNITSPLRDINSACKSCHKQSEDYLKAQVLDIQNSVAHDQRTAEYAIVS
                     LIMDTKKLRDELGNMEKFQSDGKADAKKISEELKEVLELHRKAQMRADFVNAENSTGF
                     HNPREASRMLLQAVDMARMGQAKLVEIAAANGIKDFKTSNLGFEDIQKFNPGELYYKV
                     DVNNHKAGERYYADEKDVNGNPPKELLEHDKELAPYNYQVIDKK"
     gene            complement(17870..18385)
                     /gene="nrfH"
                     /locus_tag="RJ266_000695"
     CDS             complement(17870..18385)
                     /gene="nrfH"
                     /locus_tag="RJ266_000695"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase small subunit"
                     /protein_id="HDV7354468.1"
                     /translation="MIILRRKILKKTSNLFTIFLVLLFVFFAVGFYTFYNAKGTSYLS
                     NASESCNNCHIMNEVYNEYMAGPHSQKVKGEPRATCVDCHLPHNFVAKWIAKAQSGLG
                     HAYAFTFKLDELPTNLSATEKSRKMVQENCIRCHADFAQTAINATTNPHADKSLNCAS
                     CHKDVGHKHGI"
     gene            18573..20657
                     /locus_tag="RJ266_000696"
     CDS             18573..20657
                     /locus_tag="RJ266_000696"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA degradosome polyphosphate kinase"
                     /protein_id="HDV7354469.1"
                     /translation="MQTSPDMFINRELSWLRFNSRVLDQCSKNLPLLEKLKFIAIYCT
                     NLDEFYMIRVAGLKQLFSAGVNASSSDEMTPLQQLKAIRKYLHQEKELLERYFNEITS
                     ELEKENLFIKHYENLDENLKQKCDEYFFSNIFPVIVPIAVDATHPFPHLNNLSFSLAV
                     KICDKAHPELIKFGMIRIPRVLPRFYEVSANIYVPIESIVHQHAEEIFPGYKLLASAA
                     FRVTRNADMVIEEEEADDFMMILEQGLKLRRKGAFVRLQIQKDADEQIVEFLNTHMKI
                     FHKDVYEYSILLNLPSLWQIAGNKNFTHLLSPLYTPKTLPPFDENLSIFDAVEKEDIL
                     IIQPFESFDPVYKFIKEASKDPEVISIRMTLYRVEKNSNIVQALIDAASDGKQVTVMV
                     ELKARFDEENNLHWAKALENAGAHVIYGITGFKVHAKVSQVIRKQGDKLKFYMHLSTG
                     NYNASSAKIYTDVSYFTSKAEFARDTTSFFHILSGFSKNRRLQTLSMSPNQIKEKVLE
                     MIRIETSKKNKGMIVAKMNSLVDSDIIQALYEASMEGVKIDLIIRGICCLKPDEEYSK
                     NIRVRSIIGKYLEHARVFYFKHSEPNYFISSADWMPRNLERRLELMTPIYDERSKAKL
                     AQFLRLQLSDNVLAYELKNNGEYEKIPSSEKTIDSQQTLEEYVSKIYKTLKKDTDQSR
                     ATHLASKLFKEN"
     gene            complement(20800..21750)
                     /locus_tag="RJ266_000697"
                     /pseudo
     CDS             complement(20800..21750)
                     /locus_tag="RJ266_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799189.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            complement(22577..23056)
                     /locus_tag="RJ266_000698"
     CDS             complement(22577..23056)
                     /locus_tag="RJ266_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter"
                     /protein_id="HDV7354470.1"
                     /translation="MKKNASSKILLSLGVATLLYSGAFAAEITFNSDNDLNTHFDINE
                     KDNVAIFKNEDYKNKQDVTFNISTSAFDDAPEDTKINIDLGNNSLTLKNQMDYQGKTA
                     ALVRNFNVDAKDFKTTDIGLSYFNAGIINANFTMEGSGEDFDLGNIDKNKASFFVNF"
BASE COUNT         7844 a         3876 c         3191 g         8208 t
ORIGIN      
        1 agcatcgtta ccattagata tagcttgacc taaagtatta gcttgagatc ttaaactatc
       61 tgctatcgcc atccctgaag catcatctgc tgcggagttg attctaagac ctgaactaag
      121 tctgcttaaa gaagcatcta aacttttact atttaaatca gcgtttgctt tagcatttaa
      181 agctgcaaca ttggtgttaa tacgaaatcc cattttaaat ccttttaaaa aaattcaagc
      241 tcatccatga acttgttaaa taccatatcg tgcaatcaaa aaaatatttt atactttagc
      301 aataaaattt catacttttg acaaagactt gtatttttgt tctaattttt ccataaaata
      361 aagcaaccat tcatggtaag ctttgatata ggctgtgatg aaatgcgttt tatcttgtat
      421 atgaagtttt aatacatcgg aaattaattt tccacgataa gcaaaggctc ctcttaaagt
      481 ttcatcctgt ataaactcat cttcatctaa agagtgattg aaattttcta tattttgata
      541 aactttttct aaaaattcca aaggtaaaat aaaatcttta ctgagtatat tttctaaaat
      601 ttgttttaaa gctaaagcat cgtctaaaaa tcttttagca ttatcttgat ctttttgtat
      661 tttttctttg aatttaacta ggagtttatc acttctattt ttagttaaac tttttggaag
      721 ttcaaattga ggtttttctt ttgtaaggag tttttcacaa cattctttaa aggaaagttc
      781 ttcagtgaaa ttaatccttg ctccaccttc agtagcattg taaaactttg ctttttgttc
      841 attgcaagca aaaagatatt caagttttat acgataatca ttccaggtta tatgcgttaa
      901 aacttcacct ttgcctgcat aggcggtgac tttaagttta tctatatttt cttcaccact
      961 aaatttctct ccaaaatcaa aaccttttga gtgtgaattt ccttcttcat caaaggctaa
     1021 atcttgtcct atcatgatga tatttttaaa tcctaaagcc aaagctaagg tataagaaaa
     1081 atgacttaca tgagtgcctg tatcgatata gccaaagtca ttaagattga agcgttgata
     1141 aagagcttta tttcttaaaa taatcataca attttcagcc tttaaactac gtgcgacatt
     1201 aggatgtgta gcacactcaa gagcaataat gctttgtttt aaattttctt tattttgaaa
     1261 aaatttcatt gctagatcag taaaatctaa attcgtcaca taatcaggta ttatgccttc
     1321 tttttcaagc atgcttaaag ccccatcagc acaaaagatc actgctttat cttgataagc
     1381 tttaagtaaa ggaagttgtt tagctaaact aggtcctgca gaaactacta tagcattttc
     1441 aaatttgttt tttctttcac ttaagattct ttgaaaagga atgctttcaa gcatagaagg
     1501 gatgttttgt aaaagatgag aataacactc aaaaccgata cataaactag aatttaaatt
     1561 tcttatcaca acttttatat ttttctcgca aagctcatct gctttatgcc agacatcctc
     1621 ataaaacttt ttataataaa cattattcac aaacatttca tacaaactta agtactcaaa
     1681 catatctttc atatcaaaaa gtataagcag ttgaatatct actctttctt cttcgatatc
     1741 cacaagataa atttttccac tacaaagctc ttcactcaaa tctatcgtac ttaaagctag
     1801 aataaaaagt tctatttcac tttcaaatac aaaaagatgt ttatagtgtt tagctaaatt
     1861 tttaatcagt aaagcattgc ctataccata aatacatata aaaggatatc taggagtttt
     1921 ttctaaaata ctttgataga aaaaatttat ttcttcttct aagttttcat acatgaaaac
     1981 attatgagtt ttatcaaaga tatttaaatt ttcatctata ttaaaacgag agcaagtttt
     2041 attttgtatg aaatttaaaa gtttatttcc taagggttca tttactccac ttaataaagc
     2101 ttgtatgttt ttttctagta gggtcattag ctttccttaa attttatcta tttttagtga
     2161 cattttgtca tctttttcgc taaattgata caacaaatcc tcgcaaggat aagagataca
     2221 tttttcttta taatcttttt ttgaattttg ttttattttt tctagcatta aaggaagttc
     2281 tttcttaatc aaaagtttta ccggaattcc catgccatga tttaagtttt taataaattt
     2341 tccatcaact tgagattctt tagtaacaga acacaaagtt acatcaaaac caagtttctc
     2401 aagctcttca tagaacatag ttttttcttt taaagaaaca tactcatcat ataacgaatg
     2461 ataacttata aagcaagttt ttaaacattt tgattgttct aaaagatgat cttcctctaa
     2521 aagatttcga atttttcttc ttgcgggaga aaaaaaacga ggcgatgaag aattacttgt
     2581 ccaaaaagtt tttgtcgaac aatgtgtttt aatatgatgg aaaaaatcaa aagtagaaaa
     2641 ttcactacac tgcataaaat ctatttcctt tccaaaacct acaactctcc ataaaaactt
     2701 cgcgtatgca gaattatcca acactccatc tactaaccaa ggtgcaatct tagccgccaa
     2761 atgtgctaaa tatcccccat gagaactacc tatcataata acgggtatac ccccccccca
     2821 tagtatcaaa aggagcatgt tttttaaggt aaagtgtgac atttaaaaga tcttgagctt
     2881 gcatgatccc aaaattttga tactcgtttt ttgtcggttg caaactcaca tgcaaattta
     2941 aaaaataatt tggtgtaaaa ttaccttttt gcttgccttg gacaatgcta tagttaataa
     3001 aatgaaaaat ttcactcatt tgtttatagt cttgaatttt atcaacatca taaggaagct
     3061 tgatatccgc agcttcacaa cttgctttta aaataagctt gtctatatca tctaaataaa
     3121 aagttgatcc agtttgagga cgattgccaa tacaatgata atttactcca actacagcag
     3181 tattaaattg ccttaccata taatcaccaa catattggat cgatgatata tcatcaccca
     3241 taccttgcac cacaaacacc aaggcttcag gtgttttttc atcatcatac caaagcttaa
     3301 attcaagctt tgattctctt tttataccaa gctctacatc atcacaagag tcaatctcat
     3361 aagctttgct cactatcatt acatttcccc tattaaaaga taagttttac ttgctaggtt
     3421 tttaaaattt tcattcttac ttaagatcac acaagcttta ttgctagaag agcttgtaaa
     3481 gtctatattt tctaaatctt catggctttg attggctgcg ttgatgatag catttttgct
     3541 tgcttcatta cttgaaattc ccatgagtat aaaatccgct ctatctataa aaacaagttt
     3601 taagcattct ttatcatcgc ctacgcgaaa atttacttct tttgtgccat tgaaattgcc
     3661 aagatcgaca ttttcaaccc cacttacatt actcatcgtt tttatagagc ttaaatgatc
     3721 attttttaaa gtataaatgc ttatgtcatt gatcaaagtt ttaaggttgt ttaaagactt
     3781 gctaatctcc gcttcatcct tgcttgaact catttttggt aaagcaatag cggctaaaat
     3841 tcctaagata acaatcacaa aaacaagttc taatatggta aaagcttttc tcatctatat
     3901 ccttgaaaaa tttttatttt tagggcttaa aatatcttct tctacactta caaattcctt
     3961 tttttcataa gcatcaactg cggctcttgc tatcatcaaa gcattatcag agcagaattt
     4021 taaaggagct agttttaaat ttgcattata tttttgacat aaattttgca aacgcgaacg
     4081 caagttaaga tttgcactcg ctccacctac aacgccaaaa tttttaaatt tataaagatt
     4141 aaaaattttt tctaatttat ccatgatatg atcacaagct gtattttcaa aggcataagc
     4201 tatttctgct tttatatcat cgcttaaatt tttatgcttt aaaatttcta aacgcactgc
     4261 atttttaagc cctgaaaaac tgaaagcgag ttctttagaa tgctttaaag gtgtgttaaa
     4321 agagatattt ttaagtttgg cattttttgc taaattttct atgataaccc caccaggata
     4381 acctaaattc atcattttag ccactttatc aaaactttct ccaaagctat catcatttgt
     4441 gcttgctaaa agctctaagt ttgcatcatc tttaagataa agcaccatag tgtgcccacc
     4501 actgacaagc aaaattcccc tatctaaaga aattttttct tccaaaaaaa gactataaat
     4561 atgaccttta agatgattta tagggattaa aggtaaattt agagcacttg ctaaggtttt
     4621 tgccatagaa attccactga gcaaagaaac actaagtcca ggctcatttg tcacagctat
     4681 ggcacaaaga tttttaaaat gctctttgca ttgcgtaagt atctttggta aagcctcgct
     4741 atgaagcctt gcagcaagtt caggcaccac tcctccatag atactatgat ctaattcttg
     4801 ggaaattttt ttatgaaatt tacattctaa ggtattttta tcaatgatag ctatagaact
     4861 atcatcacaa gaactttcta tagctaggat aagatttttc attcaaattc cactaaaata
     4921 gaacctaaga atttatcttt tgatcttgcc attttaagag tgtttaaatc caaattttta
     4981 gcatttttga tcaacttgct attggtattt gcttctaaaa gttgttgcaa attcgcccct
     5041 cttaactcat aaaattccac tctataaatt ttacctgcca tatctaaaga atattgtgtt
     5101 tgcatatttt ttttatgaac taaaatacca ctttcatctt ttgagtgatc aaagcctatg
     5161 atatttacgc gcacattagc tatctttgga ataagaaaat tctcttttac tttcaccttg
     5221 gttccaaaag gaacggtggt ttcattgcca tcaacttgaa aagttacctc attaaaagca
     5281 tcgctaaatt ctaaatactc aggatataat cttgtttgaa aacgattgcc atactggata
     5341 taaaaagaat ttccttctgc gataatagcc gtaagttcat tgcttgtgtt ataatttaac
     5401 tctttattta ccggaaaagg cacatagttg ataagctttc ttggattttt taaagaaagt
     5461 aaaattctat catcaaaaag ttttacttca agctctttat ttatgacttt atcaacccct
     5521 tgtggagtga gttcaaaatc tctactaaat tcaattcctg cagtttttaa ataattttca
     5581 attgccaaaa gatgataata agctcttaaa tttacaggca gatttttact cgcttcattt
     5641 gcaaaagcgg ctttgtgatt tgaaatcaca aaataagtca aagctttaag catttccata
     5701 tcgccaagct cttgggtttt ggtgttttta agatgataag catgctttgg atcagcaagc
     5761 gaagaattga cactatttac ggtttgagtg gcaatatttt caagatcagg gtatttgctt
     5821 gcattgattt cacttgtgtc aatcacgctt gaatttcccc aacgcttagg attttgcatc
     5881 gcatcgatat aagtaggttt ataaaaaccc caaccatcgt gaagattgat caccatacta
     5941 acttcaggaa gtaaaataag ctctttaatg cgttgcacag ttttataatc aggatccttt
     6001 gggctaatgc ttgcaaattt acggtttaaa tccccattat tcccacgcga acgcttgata
     6061 atgctatcaa aagctaaatt tggagccact ataatcttac ccttggtgat attataatca
     6121 ctcaaaagca aacttgccgc atgaaatcca ccaggctcat caccttgaat tccaccaaaa
     6181 attaaaactg tattattatc atctagactt tttccatttt ctcctacgct aaagtctagc
     6241 tctaaagcaa aaatgcttgt tataaaaaat aaaattgtta aaaaaaattt cattttaact
     6301 ccttaaatac tctcttgttt taaaatcata ctcaaaaacc tcttctatac ttgaaatttt
     6361 aggcactcca aaatgatcaa gggctttaaa aatgcattta gtgataccta aaaatccact
     6421 tttattttct aaaaaattat aaacaccaac ttcattagca gcattgatga taacacctaa
     6481 atttggctct tttaaaaatg tatttttaag cttaaaaata ggatattttt ttgtgctgat
     6541 tggatgaaat tttaaagcag gcattttgct aaaatcaaca gcctctaaaa taggcgtatc
     6601 ttgtttttca aatatagcat ctgaaatagc tagtttcata tctgcttttg aaaaatacgc
     6661 cgtgctagct ccatttttaa attcacacat tgcatgcact aaagatcttg gttctattaa
     6721 agcatcaatt tctttaaaat catataaatg ataagcctct ataatctcaa aaagcttatt
     6781 tgccatagtc gcactatcta tagtgatctt tgctcccatg ttccaattag gatgttttaa
     6841 agcatctttg acactgactt gatttaaatc tttgatttta tacctataaa aagctccacc
     6901 acttgctgtg atataaagtt ttgctatatt ttttttacct tcgagtaaaa attttaaagc
     6961 tgcatgctca ctatcaacgg gtaaaaattt agcccctttc aaaaaactcc cagctactac
     7021 aagactttct ttgttagcta aagctatgtt tttgccaagc tctttagcct ttaaagtgct
     7081 tttaagtcct gcaaaaccta caatggcatt gagtaaaagc ttatcttgac attctgttaa
     7141 aatttgctct aaaccttctt gccctataaa aactctatcg tgtttaacca aatgcttatt
     7201 ttttgaatct tttatggcaa caaatttggg tttaaacctt gcgatttgct catttaaaag
     7261 agcgatgtta tccccacaag ctaaagcaga aatgggaatg ttttttaaag cagcaagttt
     7321 aagagcattt actcctatac tgcccgtact tccaaaaagt atcataaaag agcaaccatc
     7381 acaaaagcag caatgatcac cgcatcgatc ctatcgagca cgcccccatg accagggata
     7441 agatctccac tatcttttac acctgcttct cttttaaaat aactctcaag caaatctcca
     7501 atcactgcaa aaatcgctac aaaaaacgaa caaagtaaag aaagccaaaa actataaaca
     7561 aaaattccca aaatagttcc aataacactc gcacaaatca agccacctat aacaccttct
     7621 aaggttttgt ttggacttgt tggagaaaaa ggagttttac ccataagttt tccgataaaa
     7681 tacgccccac tatcgcaagc tgcaacgata atgataagcc aaaaaagcgc aaacataccc
     7741 tgatctaaat acacttgcca aagtgctaaa ataggcaaac taggataaat ataaataaga
     7801 gctggtttta aggaagcctt tttataaacc aaatatccaa cgactaataa caaagctaaa
     7861 atcccaaaaa gcaaagcttt atgcgataaa cttcccaaaa taaaagctat agccaaaggg
     7921 ataatagaaa tattttctaa agcaaaaagt ttttttgctt cactaaaaga taaatacaat
     7981 aaaaccgcaa aaacgataaa attgataaaa aattgatcaa tcaacgcgat aataataata
     8041 gcccctatca tcacaagagc tgaaataatt ctagttgtat taaacatatt tttccttata
     8101 tactaatatc taggcgatga atgctttgtg cgtctttaaa atttggatct ttagactcat
     8161 cttcttcatt tttctcatca tcgctggttt tagcttcttg attgtgtttt ttcttttttt
     8221 cttcttgttc ggctttttct ttgatctctt ctttgatttc atgagtctca ttgacttttt
     8281 caagcttgtt taaagttttt tctttttcat taaattcagc catatttagc gtagctgcaa
     8341 aaccttcttt tgcaagctca ttgcttgctt gtgtagctgg ataagccata ttctgattta
     8401 tataattgat atttcctaaa gggctaactg gcattttaat cctttgtgat attaatactt
     8461 ttaaaatttg tataatttac aaacgccttt tgctgaacct taacaaaatt ttttaaggta
     8521 taatcgaccc aatacgaacc tttctttaac ttagaaaagc ttacacaaag ccttgcagca
     8581 aattctatca catcgaggct gattttttgc ttgtttgata caatcaaagt atgtgcgcta
     8641 ggaatatccc ttacatgaag ccacaaatca tcttttttag catttttaag taaaaattca
     8701 ttgccttttt catttttacc cacacaaatt ttaaactcat tgtaataaaa atgtgccaca
     8761 agatcttctt gtttataatc ttgatttttt ttgctatttt ttttaggtag taaaatttca
     8821 agctctatct cactcttagc ttgaagcaat aattctttca aactcaaggt aaaatctaac
     8881 ttttctttta aattttgtct ttgtatgttt aaatttttag ctttttgttc taattttttg
     8941 gcatttttat aatataaatt agcgctttgc ttaggactaa attcaagctt aaattcaagc
     9001 tctttgcctt caaaatcatc aagcttaaat tccctttcat aatcttttaa aacactcaaa
     9061 tttgcaaaca atacatcagc cctttttctg tattctaaag cttttaagag taaagaattt
     9121 tcttcatcta gactagaaaa aagttcttgt aaattttgta tttttttatc tacttgtgca
     9181 agttttaaat tttttatttg tttgatttta ctctcataaa tgcttgtaaa tttgcgagaa
     9241 aaataatctg caaagtcttt aatttcctca aaattttcat ccattttata aggctttaaa
     9301 gactctaaaa tcacattagg ttttacaaca cgataacttt tatcaatgtg ccttaaagcc
     9361 tctatgatca aatctttttc atctgtaaga ataacattgg tatttttacc cgtaaattca
     9421 aaataaattt tgctctcata gcttttataa gccttattag cttttacact aaaacataaa
     9481 atacgattgc cttcaaggac tttaacttcc tttataaaag cattgctaaa atacttttta
     9541 agcataaaat caaaaggtgc attataattt tttgcattaa atttagctgt ataaatcgca
     9601 ctcattgcac gagtaagatc aaaaataaat ctttctctat caaagcttaa ttccaaaata
     9661 ttgtcattga tacgcttgat aaaatcgatt tttttaaact gagaaaaaaa agtttgtaat
     9721 tgtaaaagtt ctgtatattt cataaaagaa attataaaat attttggcga attttgtggt
     9781 agaattacat taaaaaagga aatttgtgca gcttaatgag ctaaattgcg tgattttatg
     9841 tggtggtaaa tctagtcgta tgggacaaga taaaagcaaa ttgattctta aaaatcaaaa
     9901 tttaactcaa tttcaagtaa ataaattttc taaaattttt aaaaatgtct atgtgagtgc
     9961 gaaagaagac aaatttgaaa accattttag cttgataaaa gattctttag aatttgaagt
    10021 ttactctcct atgcttgcgc tttactctat actttcaaat tttaaaaatg aatttgtttt
    10081 tgttttaagt gtagatagtc ctaaagtagg taaaaatgag cttttaaaaa tgcttccttt
    10141 tttagagcaa aactataaaa taatcatagc caaaacccct ttacataaac atcccttatg
    10201 tggcttttat cacagctctt tagctcaaac ttgtaaaaat ttcttagaaa aaaatgaaca
    10261 aaaaatagga cttttatttt ctgagattaa aaccaaattt gtagaatttg aagatgaaga
    10321 tgctttttta aatcttaatt tttatgaaga atatgaaaaa tttaaaagcg agttaagatg
    10381 agaaaaattg ctttattttt aagtttatgt gtttttatat gggctagtga tttacaacaa
    10441 gctctagagt atgaaaaaca aggcgattat aaaaaagcta tggaaattta caaaaaactc
    10501 tctttaaaaa attcacctgt tttaatttct caagaacaaa acaactcaag tcaagcaaca
    10561 caaacgcaaa attctatcac tataaaaaaa gaagaaaaac aagacttttc tcgcttagct
    10621 ttagctaatt atcttggtga aaatgaaagc ttcaatcccc ttggcattag ctcttataag
    10681 atgaattatt ttttaccttt tgcttatagt tttaattctt taggagtaaa taataataag
    10741 agtgaggcga aattccaact tagtgttaaa aaaagacttt ttgaaaattt actaggacta
    10801 gatgaaaaat attatatagc ctatactcaa acttcttggt ggcaaattta tgagcattct
    10861 tctcctttta gagaaaccaa ctatcaacca gaatttttta tagatcttcc tttatatctt
    10921 aaagattatg aattttttaa caatctacgc gtaggtatat tgcatgaaag caatggcaag
    10981 ggagatgaga atttacaatc tcgctcatgg aatagaattt atgtatctac tgctatttta
    11041 tataataaat ttttatttgt tccacgcctt tggtatagaa ttcctgaaaa caaaaaagat
    11101 gatgataatc ctgccatctt gcattatatg ggaaattttg atatgaattt agcgtattta
    11161 ggtgatgatt attttatcaa tcttatgcta agaaataatc ttaaattcca caataacaaa
    11221 ggcgctatac aagttgatct aggatatgat atttttaata acggaattta ttggtattta
    11281 caatacttta atggctatgg agaaagcctt atagactata acaaacactt gcaaagactt
    11341 tccactggat ttttgatttc ttactaaaat atcctttgta gttttatcat ttcttaaaac
    11401 aaatttcatt acaatttcat ttttgataat tattattact ataaggaaag atttgttttt
    11461 taagcatata ttgagtttaa aagtgcttat agctttactt ttattctttg gaatgataag
    11521 tttatttata ggagttatca gtatcaatgt aaaagatatt cttaatctta actccactca
    11581 actagaaatc ataactctca caagaattcc tagacttata gcaattttac tcacaggaat
    11641 gagtcttagt atatgtgggc ttatcatgca acaactcacg caaaataaat tcgtttcccc
    11701 aactacagca gggaccatgg attgtgctaa atttggcata cttatttctt taatattttt
    11761 tactggggcg tcttttttca ctcaagctat cattgcttct atatttgcac ttttgggttc
    11821 ttttatattt atccaaattt taagaaaaat caaactcaaa gatgtgattt ttgtaccttt
    11881 gataggcttg atgtttggag gtattattag tgctataacc actttttttg cctatgcttt
    11941 aaattatata caaaatatcc aaggttggct acaaggcagt atggcaaatg ttatgcaggg
    12001 aaattatgaa ttgctctaca tttctttacc actttttata cttgcttatt ttttagctca
    12061 taaaatcacc atagttggca tgggtgaaga tatagcttta aatcttggaa tttcttataa
    12121 tggtatatta tttttaggct taatgattgt aagcattatc actagcttag tgattgtaag
    12181 cgttgggatt atcccttttt tagggctaat tatcccaaat ttagtagctc tttatctagg
    12241 tgataatctt agaaaaaatc ttatctatat agcactttgt ggagctttgt ttttacttgt
    12301 ttgcgatatc atttcaagac ttgttatctt tccttttgaa atgcctttaa gtatcactac
    12361 aggtgtttta gggtctttaa tctttatctt tcttttacta aaaaggaaag tttatgcgta
    12421 aaaaaatgct aattttaagc tttttaacac ttaacatgat agggattttt atatttgtgg
    12481 gtttaaatgg ctttgatgag tatgccttaa aaagtcgttt tttacaaatt gcggctatta
    12541 ttatagtagc tatttgtatc gctgtttcaa cagtgatttt tcaaacttta tgcaataaca
    12601 aaattctaac ccctgctatc ataggattag attctttata tatgttgctt caaagtgctc
    12661 ttatcttttc ttttggtgcg gctaatttaa gtgtttataa aaacgatatc aattttttaa
    12721 tcactctagt ttgtatggtg gttttttcac tagaacttta taagatttta tttagtagtg
    12781 atagaagtat ttatcttatc atgcttttag gtttagtttt tggaacactt tttagcactt
    12841 taagctcttt ttttgaagtg ctaatcgacc ctgatgaatt catggtaata caaggaagaa
    12901 tgtttgctag ttttgataat attgcttttg atgttttaat tcttgcttat attattagct
    12961 ttttaagttt tatatggatt tttcgctata tgaaattttt agatccttta aatttaggca
    13021 aagatttagc gataaattta gggataaatt atcaaaaaat ttcaaaacaa ttaatgatta
    13081 tcatagctat tttaacttct attagcaccg cacttgtagg tcctataacc tttttagggc
    13141 ttttggtggt aaatatcact tatgaactat ttaaaactgc aaagcatagt attttgctaa
    13201 gcgcttgtat acttattagt attttggctt tgcttggagg ggtgtttttt gtctctagag
    13261 tttttgatta taatgccact ataagcatgg ttattaattt cttaggtggg atatatttta
    13321 tctatcttgt attaaagggt aataaattat gattaaacta aaaaatatca ccaaatttta
    13381 tgataataaa gtcattattt cagatcttag ccttgatttt cataaaggca aaatcacttc
    13441 tataatagga gccaatggcg ctggaaaatc cactctttta gctctagcaa gtcgtttgat
    13501 aaaacctagt agtggagaaa tttatatcga tggaatgaat ttaaaaaatt ataaagagca
    13561 aatcttagca caaaaaattt ccattctcaa acaacaaaac aatatcaatt taagattaaa
    13621 agttgaagaa ttagtcgctt ttgggcgttt tccgcattct caaggaagac ttaatacaaa
    13681 cgataaaatc aaaatcaatg aagctttaga atacatggaa cttagcaact taagaaatga
    13741 atttttagat acattaagcg gcggacaaaa acaaagagct tttatagcca tgattatcgc
    13801 tcaagatact gaatttataa tgtttgatga gcctttaaac aatcttgata tgaagcatag
    13861 cgtacaaatc atgcaactaa tgaaaaattt agtcaaagac tttaacaaaa gtatagctgt
    13921 tgtattgcat gatattaatt ttgcttcgat ttattctgat gaaatcatag ccttaaaaga
    13981 tgggaagctt ttaaaacaag gttcaaaaga tgaaatcatc aatcaagaaa atttaaaaca
    14041 aatttatgat atggatatac ccgtaagtca aattgatggt aagaaaattt gtatttattt
    14101 ttaaaaagga gaaaatatga aaaaatcttt agtttttgca ttttttgcat tttttttaag
    14161 tctaatctta acagcttgta attcaaactc aaatgaaaac aacgcaagtt ctacaacaaa
    14221 aaccaacact gctacggtga aagttttacc tatcagcatg agtgatgagg gtgatagttt
    14281 tttagtgaag gatagtctag gagaaaataa aatccctaaa aatccttcta aggtagtgat
    14341 cttagatctt ggaattttag atacttttga tgctttaaaa ttaaacgata gagtcgcagg
    14401 cgttcctgct aaaaatttac caaaatacct acaacaattt aaaaacaaac ctagtgtagg
    14461 tggagtacag caagttgatt ttgaagccat taatgcttta aaacctgatc ttatcatcat
    14521 ttccggacga caaagtaaat tttatgacaa attaaaagaa atagctccaa ctttatttgt
    14581 aggtcttgat aatgcaaatt ttttaagctc ttttgaaaac aatgtcttaa gcgttgcaaa
    14641 actttatggt ttggaaaaag aagctttgga aaaaatttca gatattaaaa atgaaattga
    14701 aaaagccaaa agtatagttg atgaagataa aaaagctctt attattctta caaattctaa
    14761 caaaatttca gcctttggtc ctcaatctcg ctttgggatt attcacgatg ttttagggat
    14821 taacgcagta gatgagaata taaaagtagg cactcacggt aaaagtatca attctgaatt
    14881 tatattagaa aaaaatcctg attatatttt tgttattgat agaaatatca ttgtaggcaa
    14941 caaagaacga gcgcaaggca tactcgataa tgcacttgtc gctaaaacca aagcaacaca
    15001 aaacaaaaaa atcatctatc ttgatccaga atactggtat ttagcaagtg gaaatggact
    15061 agagtcttta aaaactatga ttttagaaat caaaaacgct gtaaaataat ataacttcgc
    15121 aagggctagt ctcttgcttc gatacttaat aaaatacttg ggattttcaa gaaagcttta
    15181 gtggcggaca gagagggatt tgaaccctcg agacccgtta agatctgcac ccttagcagg
    15241 ggtgtggttt cagccactca cccatctgtc caataaagta aagtatgatt atacaaaaaa
    15301 ataaataata cctagcttaa aaagctagga aaaatcaaag gctaagataa gccaaaagca
    15361 aagttacaac aacccctact ccaagaactg caaattgttt acttctatct tttttatttg
    15421 caaacaaagt aatcataagc cctgaaatat aaagcataaa taaagtaata ccaaagccta
    15481 cactaagcac agaaaaatac caagcaccct tatctttatg aagcataatc atatcgccaa
    15541 gtaaagatct tatttttaaa gtaatattgt attcattagt agatttttga gttatattag
    15601 cactataatg agttccacct attgttatac ctttatcttt acttttaatg atatctgtat
    15661 tagatggtac ttttaaacca tttgttttta aaaactctat taaagcttct ctttctttac
    15721 cactttctat aacttttgac aattgatact gctcaacttt taagcccaca tcttgattaa
    15781 taccaaaaat atacgctata cctgttaaag caaaaagcaa agcacaaggc aagaagaaca
    15841 aactaagata gatatgaacc tgtctaaaca atttattttt attgatcatt ttaactcctt
    15901 tttgattatc aaaatttgtg atattttgac aaaacaaagt gaagcaaaag tgaattttaa
    15961 ataaaaagtt tatatttttt aaaataaaaa agaaaaagcc ctatgattat agggcttaag
    16021 aattattttt tatcaatcac ttgataatta taaggagcaa gctctttatc atgctctaaa
    16081 agttcttttg gaggattgcc attaacatct ttttcatctg catagtaacg ctctccagct
    16141 ttatgattat taacatctac tttataataa agctctcctg gattaaattt ttgaatatct
    16201 tcaaaaccta aatttgaagt tttaaaatct ttaattccat ttgccgctgc aatttctaca
    16261 agtttagctt gtcccattct tgccatatca acagcttgca ataacattct tgaagcttcg
    16321 cgaggattat gaaaaccagt tgagttttca gcattaacaa aatctgctct catttgagct
    16381 ttacgatgaa gttctaaaac ttcttttagc tcttcgctaa tttttttcgc atcagctttt
    16441 ccatcgcttt ggaatttttc catattgcct agttcatcac gtagtttttt agtatccata
    16501 atcaaactaa caattgcata ctctgccgtt ctttgatcat gcgcaacgct attttgtatg
    16561 tcaagcactt gagcttttaa ataatcttcg ctttgtttat gacaagactt gcaagcagag
    16621 ttaatatctc ttaaaggaga ggtgatattg tgttgagtaa cctttttagc cccttctcta
    16681 acataaggca tatgacaatc cacgcaactt actccatttg cagcatgcac accgccacta
    16741 taaagttcac tttctgggtg ttgaatttta ataatttgtg cccctgttaa tttatgtgta
    16801 aaatcagctc caaatactcc acgaacttta tcataataat catctaacat ttcaattcta
    16861 aatggttgcc cttttttcca ctcactccaa ggaaaagtta aaactatacc atcggtttca
    16921 atctctttag ctttattacc atctctccaa aattcatact catcataatt tttctgagtt
    16981 ccattccacc attttttaga actatcatct acaatagttt cacccattac ttttactttt
    17041 tcccctgttg gtttaaaata gtattcaaca tggcattgag agcaaactaa agttctcatt
    17101 tcttctcttg tagcttttac gccttgcact ggatcttttt catatcctct agaaactaaa
    17161 gcattaatag ctgctggacg agtaagtctt aaactcatat catttggatt gtgacaatct
    17221 gcacaagtta cacccattct tttaccacca tgtggacctg catgttcagg tgaattttcc
    17281 actataccat caacggctgg gatattttta atcatagtcc aataatttgt agagttaaaa
    17341 gcaataaaat ctcctttagc aacatttttt ataagccatg gagtccatcc actatgacaa
    17401 ttcatacaag ctgcgggctg gcctttaaaa gcagcaaggc cgtgagcatt aagaaaatct
    17461 ttgttgtttc ttgctgtttt catttgatct acttgaaccc aaaaatgccc tctttcttca
    17521 ttgaaatcaa gactaaaagg atatcctgcc caaagtatgg ttaattgagg aaagcgaatt
    17581 aattttgaat aagctaaatt accaccaaat tcagtagctt taggctcttc tttttcaact
    17641 gttaaataca tttttagctg ctctggaaaa accttacccc atttttcaaa atttggatca
    17701 tcatcactaa gcaaagaaaa atcagcattt gctgcaatgg catttttatt tgcttcatct
    17761 tctttttttt gattgatatc attatttagc cataaaactc ccgctataag taaaaccaaa
    17821 acaacaatac ccaagcgtaa aatatttttt ttcattcatc ttctccttat taaattccgt
    17881 gtttatgtcc aacatcttta tgacaagaag cacaatttaa tgacttgtct gcatgtggat
    17941 ttgttgtagc attgatagct gtttgagcaa aatctgcatg acagcgtatg cagttttctt
    18001 gcaccatttt tctgcttttt tcagtcgcac tcaaatttgt aggcaactca tcaagtttaa
    18061 aagtaaaagc ataagcatgt cctaaaccac tttgcgcttt agctatccac ttagctacaa
    18121 aattatgtgg caaatgacaa tccacacaag ttgctcttgg ttcgcctttg actttttgag
    18181 agtgtggtcc tgccatgtat tcgttataaa cttcattcat aatatggcag ttattacaag
    18241 attcacttgc attgcttaaa taagatgtgc ccttagcgtt ataaaaagta taaaacccaa
    18301 ccgcaaagaa aacaaaaagc aaaacaagaa aaatagtaaa aagattcgaa gttttcttca
    18361 aaattttcct ccttaaaatt atcatttctt aaaatcttca atgaaacaac aatgtcacag
    18421 aatttcccag aaataaattt tgtgatttta acatagatga atttaatata attttaaaga
    18481 tatatttact cttaattaac ctaaaaaatt taaaactttt attcaataat ttcaaaataa
    18541 atgataaaat acaactaaaa aaggaaaaat taatgcaaac aagtcctgat atgtttatca
    18601 atcgcgaact ttcttggctt cgctttaatt ctcgtgtttt agaccaatgt tctaaaaatt
    18661 tacccttgtt agaaaaatta aaatttatag ctatatattg cactaattta gatgaatttt
    18721 atatgatacg cgtcgcaggc ttaaaacaac ttttttcagc tggagttaat gcaagcagta
    18781 gcgatgaaat gaccccgtta caacaattaa aagccatacg caaatactta caccaagaaa
    18841 aagaactttt ggagcgttat tttaatgaaa tcacaagtga attagaaaaa gaaaatcttt
    18901 tcataaaaca ttatgagaat ttagatgaaa atttaaaaca aaaatgtgat gagtattttt
    18961 tctccaatat ttttcctgtt attgttccaa tagctgttga tgctactcac ccttttccgc
    19021 atttaaacaa cttatctttt tcactagcgg ttaaaatttg cgataaagcg catcctgaac
    19081 ttataaaatt tggaatgatt agaattccaa gagttttacc tcgtttttat gaagtaagtg
    19141 caaatattta tgttcctata gaaagtatag tccatcaaca cgcagaagaa atttttccag
    19201 gctataaact cttagcttca gcagcattta gagtgactag aaatgcagat atggtaatag
    19261 aagaggaaga agctgatgat tttatgatga ttttagaaca aggcttaaaa cttcgcagaa
    19321 aaggagcttt tgtaagattg caaattcaaa aagatgcaga tgagcaaatc gtagaatttc
    19381 ttaatactca catgaaaatt tttcataaag atgtttatga atattctatt ttactcaatc
    19441 ttcctagcct ttggcaaatc gcaggaaata aaaactttac gcatctttta agcccacttt
    19501 acacgcctaa aactttacca ccttttgatg agaatttatc tatttttgat gctgtagaaa
    19561 aagaagatat actcatcata caaccttttg aaagttttga tccagtttat aaatttatca
    19621 aggaagcaag caaagatcct gaagtaattt ctatcagaat gacactttat agagtggaaa
    19681 aaaattccaa tatagttcaa gctttaattg atgctgcaag cgatggaaaa caagtaactg
    19741 tgatggtaga attaaaagca cgctttgatg aagaaaataa tcttcattgg gcgaaagctt
    19801 tagaaaatgc cggagctcat gttatttatg gcattacagg ttttaaagtt cacgctaagg
    19861 tttctcaagt catacgcaaa caaggagata aacttaaatt ttatatgcat ttaagtacgg
    19921 gaaattataa tgcaagcagt gctaaaatct atactgatgt gagttatttt acaagcaaag
    19981 cagaatttgc aagagatacg acaagctttt ttcacatctt atcgggcttt agtaaaaatc
    20041 gtcgccttca aactctttca atgagcccaa atcaaatcaa agaaaaagtt ttagaaatga
    20101 tacgcattga aacaagcaaa aaaaataaag gtatgattgt tgctaaaatg aattctcttg
    20161 tggatagcga tatcatacaa gcactttatg aagcaagtat ggaaggggtg aaaattgatc
    20221 ttatcatacg tggcatttgt tgcttaaaac ctgatgaaga atacagcaaa aacatacgcg
    20281 ttagaagcat cataggaaaa tacttagaac atgctagagt attttatttt aaacatagcg
    20341 agccaaatta tttcatatca agcgcagatt ggatgccaag aaatttagag cgtcgcttag
    20401 aacttatgac tcctatatat gatgaaagaa gcaaagctaa attagctcaa tttttacgct
    20461 tgcaacttag tgataatgtt ttagcttatg agcttaaaaa caatggagaa tatgaaaaaa
    20521 ttccttcttc tgaaaaaacc atagattctc aacaaacctt agaagaatat gtaagtaaaa
    20581 tttataaaac acttaaaaaa gatacagatc aaagtcgtgc aacgcactta gcttccaaac
    20641 ttttcaaaga aaactaaaag tttttagggt tttttactct aaagacttat ttacttgttt
    20701 gttataaaaa agggctttaa gataaagccc taggagattt cccatagaaa taaacaatca
    20761 tttctaaact ataaaaagat ttagaaatga tttttaagat taaaatttat acttaagtcc
    20821 tacttgacca cttaagtaag tttcattttt attatctact ttacctgcta gtatttgttt
    20881 agcaccaaag ccaagattca tactgagttg atttgtaaaa tctacattac cccctacgat
    20941 aatttgtccg tatgtttttt tcttgttgtt agcttctaca ctagtaaaga aagcattatt
    21001 tacagctagg ttagctgtgt aatcatcacc actattgata acaaattgtt ctatttttgg
    21061 agttacaaaa atataagagt tttcattcat atattttcta aattcagcac ccacttcaac
    21121 acttacagaa ttgtttttca tagaatcaat atctttagca atagcaccat tttctgtatg
    21181 agatggagta taactaaaat aataatttac tcccgcaaaa ggtttaataa ataaagtatt
    21241 atcactaaag tcaaacacac gacctgcatt agcactaagt cctaagaatt tacttgtata
    21301 atctgagtta tatgcaccat ctatttgaac attgtcttgt ttagttggag aaacttgagc
    21361 ataagcttta agattaagtt cccattgtgg agctatattg atagtagaat acatacctaa
    21421 ttggaagtta tcactttttt gttctagatt attgtctttg attttagcat ttgcataagt
    21481 aaaataagca ccccataaaa catcatcatt agcttgttta tctacaccta tagtagcacc
    21541 atacattgca ccactatctc catcgataat gttagcacca ccaaaagcat tagcctaaac
    21601 actattggta tattcattta catagcttgg tctcatatca ctatctaaag cagcaaattt
    21661 aagaccattc attttagaag cataagttcc aaaaggattg tttagcattg ctacacgaga
    21721 acctatagaa acatcattag aaatattcat agtggtattt actgcactag aagctgaatt
    21781 gagattagat acagatttac ctgtattgtc tgtgtctttt ttgatttgta gggctagttt
    21841 tacaccttct ctacttgcta aatctgctcc tatacttcct aattgttctg tgatagaacg
    21901 aagtgctagg atagaagctt tatcattagc actaagattt aaatttgaat ttttatttac
    21961 taaatcaatg tatttttcat catcgatttt accgccattt ttctcagctt cttgtttgag
    22021 ttgttcaagt tcggtttttt gttgttgtag ggtttttttg gcttgctcat tatctaaacc
    22081 atctatgatt ctagtgatag cttcaagatc tactgcgatt tgattagtta aatttttagc
    22141 tgctgcagta gcacctccat taatcactaa gcatttatca ccaccacagt ttttaaggct
    22201 aagtttataa tccacaaagg caccgccata cttcttatca tctataacat caagataagc
    22261 agcataatca tcaccattca gcaagctttc atttatataa gaacttgcag tttttaaaat
    22321 caaagctcct gcgttagttt catcattaag cttatctgtt tttatgtctt ttgctcttaa
    22381 agcaataaaa tcatttacat ctaaattaga ataagattga gataaaaatc taagacctgc
    22441 ttctttaagc gttgctgttc cattgacttt aaaagtatcg cttttcattg aaacaatagt
    22501 actatttgtt gcactaaagt ctccatttac agttaagccg gtatttacag tatcgttagt
    22561 attttctcta ctaccattaa aaattaacaa aaaatgaagc tttattttta tctatattgc
    22621 caagatcaaa atcttcacct gaaccttcca ttgtaaaatt agcattaata attcctgcat
    22681 taaaataact aagtcctata tcagtagttt taaaatcttt agcatctaca ttgaaatttc
    22741 ttactaaagc agcagttttg ccttgataat ccatttggtt tttcaaagtt aaagaattat
    22801 tgcctaaatc aatgttgatt ttagtatctt caggggcatc atcaaaagct gaagtgctga
    22861 tattaaaagt tacatcttgc ttatttttat aatcttcatt tttaaaaata gcaacattgt
    22921 ctttttcatt aatgtcaaag tgtgtattta aatcattatc actgttaaaa gtaatctctg
    22981 ccgcaaaagc acccgaataa agcaaagttg ctacacctaa gcttagcaat atcttgctcg
    23041 aagcattttt cttcataagt ttctccttca ataaatttaa actgaaggaa aattataccc
    23101 ccccccctaa aaataagct
//
LOCUS       DAPIWB010000022        23045 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.023, whole genome shotgun sequence.
ACCESSION   DAPIWB010000022 DAPIWB010000000
VERSION     DAPIWB010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23045)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23045)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23045
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.023"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(203..2455)
                     /gene="flgL"
                     /locus_tag="RJ266_000699"
     CDS             complement(203..2455)
                     /gene="flgL"
                     /locus_tag="RJ266_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgL"
                     /protein_id="HDV7354471.1"
                     /translation="MRITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDAS
                     TYIDNTRLEYEIKTLEQVKESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSN
                     SQTSREAIAKELERIKESIVQLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINV
                     VTGAGTESPYNIPGWDLFFKADGDYKKQISTNVSFTDNRWDLTQNPDKTKYLTGDSKW
                     QQLIGQGYVKDNSLDADKDFEYDDSKLDFPPTTLYVQGTKPDGTSFKSAVLVKPEDTL
                     EDVMENIGALYGNTPNNKVVEVSMNDSGQIQITDLKQGNNKLDFHAVAFTPQADDKTE
                     LTGIIDAAKQEGISMNEVTNRVMQAATATPSNGDITKLNNPVTVTINNQQFIIDLKQT
                     DFIKSKMTDTDGNAANGADYDNVYFEKNGNTVYGNVSQVIKGSNAYATDSTKLSEVMA
                     GDSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSYLDPNNPGQTISFPIMHTNPATGNS
                     GVVTGSNDITYGQINDIIGMFAADKIPTTTIQANNGQINNADYTQIQQLMKDSQATVD
                     VSMDYKGRISVTDKLSSGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSL
                     TIDEPNVDIIKDLDSMIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVNKLNT
                     TMGAYHNTIEGVNTRTSFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKASTT
                     ISQLSLLNYM"
     gene            2636..2722
                     /locus_tag="RJ266_000700"
     tRNA            2636..2722
                     /locus_tag="RJ266_000700"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2670..2672,aa:Leu,seq:caa)
     gene            2733..2807
                     /locus_tag="RJ266_000701"
     tRNA            2733..2807
                     /locus_tag="RJ266_000701"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2765..2767,aa:Gly,seq:gcc)
     gene            complement(2837..4768)
                     /locus_tag="RJ266_000702"
     CDS             complement(2837..4768)
                     /locus_tag="RJ266_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDV7354472.1"
                     /translation="MALIDLIEASKKFGDKIVLNEANFSANEGEKIAIIGKNGEGKST
                     FLKTLLGTLPLDSGRIIRQNGKSIAMLSQTVDFNANLSVKEAIKQELAEIYNALEEYE
                     ILHKKLEEDPSNKDYLKKIDTLMTLIDSKDAWNIESKIIRVLKEFSLLEYESRIISTL
                     SGGEIRRVGLCILLLKNPDILLLDEPTNHLDVYMTSFLEELLKNSKMCVIFISHDRYF
                     IDAIAHKCVEVEQGKLSIFKGGYANYLEKKTQILQSLAKSHETLLKQLKSEEEWLRRG
                     VKARLKRNEGRKERIFKMREEAKKNPGAIKRLKLEISRAALNFNGEKTINRKKMLFEL
                     KNISKNINDKNLFKDFSTRILQGERIAIVGRNGCGKSTLLKILLGQIKQDCGEIKRGE
                     LKIGYFDQARSLVNSDKSLLEIFCPNGGDRVEVRGKNMHVYGYLKNFLFPKEFLDKSV
                     ALLSGGEKNRVALALLFTKEYDVLILDEPTNDLDIATINILEEYLLSFEGAILLVSHD
                     RYFVDKIATKLYTFEGNGYINILHTLYTEYLENEKEIEELDNFALELQTQEQNNNQKE
                     KSSKKLSYKENEILKNHPEKIDFLEQKIAKLNQDLSDPNVYQEIGINKLYQELEVMQK
                     ELEILENEYFLVLEKSENL"
     gene            complement(4772..6061)
                     /locus_tag="RJ266_000703"
     CDS             complement(4772..6061)
                     /locus_tag="RJ266_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDV7354473.1"
                     /translation="MLKTKNIFIVFFVVLALIFGFIFYTFTNSYLNFLLIKQYEQKIK
                     SLDDVLKFSLLEHLNDANIKDFAKDTRADFIILNNDMKISSVKNPDFFSNLKEGEILN
                     FNSKKILTKSFICKGYKYIIIVYPRFLDLELFWTKMAIGFGVCLLFVFILMLLLGRRI
                     EKNFNKILDFLDSIGDYKVVILEKGMFKEFNLLNEKLLKTKDKILKNTQKNKKQSDKI
                     TLKNTQLASVISAISHELKNPLSVIDLSLEMLKDEKLEDKKLKKELLEKISRQSIKLN
                     ALTHKLNFVFNLNSEALQMQEFDLFFLCEKITKNPGFERVVLQGKSTKVKADEFLIEQ
                     VIINLLSNALKYSQKEVILTARDQKIIVQDFGKGIEEDKIKLITKKFYKIDVKSDNSF
                     GLGLFLVKKILNIHKSYLEISSTLGYGSSFSFKLSQG"
     gene            complement(6055..6717)
                     /locus_tag="RJ266_000704"
     CDS             complement(6055..6717)
                     /locus_tag="RJ266_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDV7354474.1"
                     /translation="MLKFKILIIEDDIDLNELLVLKLKSSGYEVISLADFFGVEDLLD
                     NEQIDLLIVDRNLPSGDSLEKIQDLREQGYKEAVIFLTAKALHQDLLEGFESGCDDYV
                     CKPFDFNELLLRIKAILKRHKKEEEKLSFGDFILDLVSYEFFYKNQKLEISNLDYELL
                     KCFFENPNTLLTRQFLSESVWKDDTTSDKTINIALTRLRNKFPKLKDHIISVRGIGYK
                     LC"
     gene            complement(6704..8287)
                     /locus_tag="RJ266_000705"
     CDS             complement(6704..8287)
                     /locus_tag="RJ266_000705"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HDV7354475.1"
                     /translation="MKKKIIVCDAILDKGVDILRKAEDIELIEAAKFPKDELMQMLSD
                     IEVAITRSSTDVDVNFLNHAKKLKALVRAGVGVDNVDIPECSKRGVIVMNVPTANTIA
                     AVELTMAHLLTSARSFVNAHNFLKIERKWEREKWYGIELMNKTLGVIGFGNIGSRVAI
                     RAKAFGMKILAYDPYISASKITDLDMEQAKNLDEILEKSDFITIHTPKTKETNGMIGK
                     QEIAKMKDGIRLINCARGGLYTEEALYEGLKSGKIAWLGIDVFDKEPATNHPLLDFEN
                     ISVTSHLGANTLESQDNIAREACEQALSAARGVAYPNALNLPIKTEDLPPFVAPYIEL
                     VSKMAFLAVQIDKNPIKSIKLEAEGIIGEYANSMLTFTAVGALGGILGEKINYVNAEF
                     VAKEKGVELSCETLPNSGYNNKLSVKIITENSNISVSGTVFNENEQRIVGLNGFKTDF
                     KPKGKMIIFKNKDIPGVIAKISSVLAAKNINIADFRLGRDGFGYALAVVLIDEKVQKE
                     VLDELKQLEACVFVQYVEI"
     gene            complement(8284..8772)
                     /locus_tag="RJ266_000706"
     CDS             complement(8284..8772)
                     /locus_tag="RJ266_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354476.1"
                     /translation="MKKYITISILSILLLILLAVVFTLLWQFKANVNFIPQFAKDTNT
                     QPSIQTQNQDLSWQEELAKWPTRDFTPAAEKFTLYFDADTSELKEKNKYYQLIVGKYD
                     IYSMFCLRQTLNSFNVKYFLLKSGDSPEIFLDTGNEKLIDDIIKELKKYKINTEVKEI
                     WL"
     gene            complement(8772..10442)
                     /locus_tag="RJ266_000707"
     CDS             complement(8772..10442)
                     /locus_tag="RJ266_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HDV7354477.1"
                     /translation="MSEVNKKVQGGVDDYLEEEDFGQLLEAFDKSREEATTEGVIVEI
                     KNDEVYVDIGKKSEGILALSEIQGDNSKLLFNVGDSIKVAVMGSRGGRSLLSHKKALR
                     KERVIEFIKNYQENQDDIFTVKVVGKNKGGLIVVDENDVEFFLPKSQYGFKETNNIIG
                     KTFKVKIIKIDKDEQSIIVSRKKTLDDERRKRKELINNIAQQEDLIEGIVKKITTYGM
                     FVDVGGVDGLVHYSEISYKGPVNPGTLYKEGDKVPVKVIKYDKERKHLSLSIKAALPD
                     PWSEIKDTLDVGDTIKVIVSNIEPYGAFVDLGNDIEGFLHISEISWDKNIKNPKDYIN
                     KGQEIDVEVIEINPNERRLRVSLRNLLSRPFDEFMKSYKIADVVEGEITSVTSFGAFV
                     KLGGIEGLLHNEDASWDRNDKCKDKFSQGDKIKVKIIKIDKENQKISLSTKELSSSPV
                     QEYAKIHKVGDIVKGAIRDIKDFGVFVELSKNVDALIHKEDISTSMLENLKIGDDIEA
                     AIVFIDEKKNRIRLSVKNLVRIKEREVLNEINNDDKVTLGDIIKDQLA"
     gene            complement(10574..11407)
                     /locus_tag="RJ266_000708"
     CDS             complement(10574..11407)
                     /locus_tag="RJ266_000708"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HDV7354478.1"
                     /translation="MIIELAKNYGFCFGVKRAIKKAEQIKDAATIGPLIHNNEEISRL
                     QKNFNVKTLENIQALSNEKKAIIRTHGITKQDLEELRKKDIEIFDATCPFVTKPQQIC
                     EQMSKEGYEVVIFGDENHPEVKGVKSYVSTKAYVVLDKKELQNIKLPNKIAVVSQTTK
                     KPEHFMEIVNFLILKTKEVRVFNTICDATFKNQDAIKELSLKSDVMVVVGGKNSANTK
                     QLFLIAKTNCEDSYLIETEEELKKEWFLDKKHCGISAGASTPDWIIQKVIAKIKNFKI
                     N"
     gene            complement(11397..12683)
                     /gene="aroA"
                     /locus_tag="RJ266_000709"
     CDS             complement(11397..12683)
                     /gene="aroA"
                     /locus_tag="RJ266_000709"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HDV7354479.1"
                     /translation="MKIYKLQTPVNAILENIAADKSISHRFAIFSLLTQEENKAQNYL
                     LAQDTLNTLEIIKNLGAKIEQKDSCVKIIPPKEILSPNCILDCGNSGTAMRLMIGFLA
                     GISGFFVLSGDKYLNNRPMRRISKPLTQIGARIYGRNEANLAPLCIEGQKLKAFNFKS
                     EISSAQVKTAMILSAFRADNVCTFSEISLSRNHSENMLKAMKAPIRVSNDGLSLEISP
                     LKKPLKAQNIIIPNDPSSAFYFVLAAIILPKSQIILKNILLNPTRIEAYKILQKMGAK
                     LEMTITQNDFETIGEIRVESSKLNGIEVKDNIAWLIDEAPALAIAFALAKGKSSLINA
                     KELRVKESDRIAVMVENLKLCGVEARELDDGFEIEGGCELKSSKIKSYGDHRIAMSFA
                     ILGLLCGIEIDDSDCIKTSFPNFIEILSNLGARIDY"
     gene            complement(12680..15001)
                     /locus_tag="RJ266_000710"
     CDS             complement(12680..15001)
                     /locus_tag="RJ266_000710"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HDV7354480.1"
                     /translation="MIITKSWLNDWLELEEISSDKIAKTLNSIGIEVDRVGALKAPDK
                     VVVGYVKEKIKHENSDKLSICQVDIGSETLQIVCGAANVDAGQFVAVATKGAIMPNGM
                     EIKEAKLRGVDSCGMLCSSLELGFEKINEGIMLLDESIGKLELGRPLNTYEIFNDELI
                     EVELTPNRGDCLSIYGIARDLAAALNLNLKEPKPFKESENVLGIGRILRLAAEKELNG
                     LYNYRAIGLKEEIQTNLLLSLRLAQIEGLGKNSIENLLNYATHSTGVLFNAYDLSSFS
                     EKDEEFTINLSKQVHGETKVSYKDKLLSFSGIFQNNESRCKDDSKIIIIEANYTDPLV
                     IADAKIYHKDQDEKMLYRSFRGSEPKLNLGMDFLLGIFEQIPNLVIYSSSQQILTDKE
                     LPIIPISIEGISDIIGQNVDKDEVLKILKKLGFELILSGEGLINVKAPLHRPDIKNLS
                     DICEEVVRIIGIDNIASKGLEFIEKNRLNSAYKNYIEFLNLRKRAVASGYFESLHYVL
                     DNGEELKRLGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKKIIKLFELG
                     AVFNVNNQELNRIAFIHSGLKEEAKISNKAKPESVQFYDFLLDIKNIIGDFKLKSSKY
                     NILSPYEQADIYLSDIKVGFIGRLHLKIENERDLPKTYICELDLDLIRQDFKIAKPYS
                     KFPAITRDLSVLIPKGFEYNQIKNCIEELNLEILENFRLVDIYSDENLKEFYSITISF
                     SFRDINKTLEDNQVNECMDKILNTLKNLGLDLR"
     gene            complement(14998..15990)
                     /gene="pheS"
                     /locus_tag="RJ266_000711"
     CDS             complement(14998..15990)
                     /gene="pheS"
                     /locus_tag="RJ266_000711"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HDV7354481.1"
                     /translation="MQNFIEQIQKCENLNDLEAIRISVLGKKGILTEGFTKLKELEDE
                     AKKEFAAKLNAQKEIFNEAYLAKFKDLENLALEERMKQDALNFNYFDESITTGALHPV
                     MSTMDKIIEYFIALNFSIEKGPLIEDDFHNFEALNLPKSHPARDMQDTFYFDDKRLLR
                     TQTSPVQIRTMLAQKPPIRMIAPGAVFRRDFDITHTPMFHQVEGLVVEEGQKVSFANL
                     KSVLEDFLRYMFGDVKVRFRPSFFPFTEPSAEVDISCVFCKGKGCRVCKHTGWLEVLG
                     CGIVDPNVYNFVGYENVSGYAFGLGVERFAMLLHQIPDLRSLFEGDLRLLEQFR"
     gene            16113..16478
                     /locus_tag="RJ266_000712"
     CDS             16113..16478
                     /locus_tag="RJ266_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HDV7354482.1"
                     /translation="MQEKTIFELIVEGKLPCNKVLESDDFLAFHDIAPKAPIHILIIP
                     KKHFKDFQEFDPELMGKMTSFIQELAVLLGVDKSGYRLVTNCGKNSGQEVFHLHFHML
                     GGFELPKEKTKKENPQALF"
     gene            complement(16508..17077)
                     /locus_tag="RJ266_000713"
     CDS             complement(16508..17077)
                     /locus_tag="RJ266_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HDV7354483.1"
                     /translation="MSKKVLIPLAQGFEEAEFIGIADVLKRARELNPDLEVVIASLNS
                     ELLVKGANGISIKADCSIEDVDIENLDAIALAGGFEGMMNLKNSNVILNIIKQLHSKN
                     KIVAAICASPIVLNEAGVLEGEFACYPSCEVGLNGNRVNKAVVVNKNVITSAGPATAI
                     LFGLELAKKLCGDEIYQKLYEGMLLPLTK"
     gene            complement(17070..17249)
                     /locus_tag="RJ266_000714"
     CDS             complement(17070..17249)
                     /locus_tag="RJ266_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354484.1"
                     /translation="MLEFPKNKVVFMEILDFILIVIFVFLMIVLVIGFNRQMMQKNKE
                     REERFKKYKKGEQNE"
     gene            17331..18074
                     /locus_tag="RJ266_000715"
     CDS             17331..18074
                     /locus_tag="RJ266_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002953944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDV7354485.1"
                     /translation="MESEKYKNFCFFVIIILWGYFSFPIEILKIQDPSGVVSYGYTEN
                     AKAYLKSYLITLLLTACAVIIGVIIGFSLAILRFSKFKTLNFIIDEYIDIIRGTPVIL
                     QLMIFAFVIFTFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYK
                     TSMKEIILPQATKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNPKPI
                     IFTGLVYYVSVKIFSYFAKKLELRMNKND"
     gene            18067..18795
                     /locus_tag="RJ266_000716"
     CDS             18067..18795
                     /locus_tag="RJ266_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDV7354486.1"
                     /translation="MIEVKNLQKKYGELEVLKNINTTISKGDVIAIIGPSGGGKSTFL
                     RCINRLELADSGEILINKQNILDKEIDINKIRQKVSMVFQHFNLFANKNVMENLCLTP
                     IKTGILSQEEAIKKAKILLAKVGLADKENIMPHKLSGGQKQRIAIARSLMMNPDVILF
                     DEPTSALDPEMIGEVLSIMKDVAKEGLTMLVVTHEMGFARNVANRIFFMDKGKIAVDA
                     SPKEVFENPSNERLREFLNKVLNH"
     gene            complement(18823..20289)
                     /locus_tag="RJ266_000717"
     CDS             complement(18823..20289)
                     /locus_tag="RJ266_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HDV7354487.1"
                     /translation="MNLDIMLDFANKASDIIANKIVPNTDIIMVVLLIVCGLYYSFLT
                     RFVQFRMLSSVFKILTEKNEGHTKEHISPFQALMISTASRVGIGNIAGISLALATGGA
                     GALFWMWVMAFFGGASAFAESTLAQVYKSKDDTGGFKGGPAYYIKKALGSHFFGAFFA
                     FILIITYAYGFNGLQSQTMTSSFKVYYDMFNPNAAVDFTSSSWPMIIGIVLTIFGAWM
                     FFSHHTKIGKISSLIVPFMALAYVLLAVIAVLMNFDKIPSVVHMILQSAFDFKAIFGG
                     FAGSALVIGIKRGLFSNEAGMGSAPNAAAAALTSHPAKQGVIQAFSVLIDVVVCTSSG
                     FLVLFSMAYLGLGESKIDGGMPLVQEAMREYYGSFGIHFITIAIVLFAITSLIGNYYY
                     AQANVKYLTNSKFVMNLFRITAVAMIFIGSQMNLKLAWNLADLTMAFMATTNIISLLL
                     LGGIVNKVLKDFNTQQKSGIDPKFNASKLGIKNAECWD"
     gene            complement(20393..20860)
                     /locus_tag="RJ266_000718"
     CDS             complement(20393..20860)
                     /locus_tag="RJ266_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HDV7354488.1"
                     /translation="MFNIVLVHPRIPQNTGSIGRMCFNAGFKLHIVKPTVFDISQKAV
                     RRAGLDYWDKLEPIIWENLEEFLNENIIYKNRFFFATTKSQKAYFDAEFQKNDFLFFG
                     SESYGLPMELMQLNWENAITIPMKSYGRSLNLATSVGIISYEALRQNFSNFVS"
     gene            complement(20863..21849)
                     /locus_tag="RJ266_000719"
     CDS             complement(20863..21849)
                     /locus_tag="RJ266_000719"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HDV7354489.1"
                     /translation="MSLIKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLL
                     APLAKNLGVSFVAVKSEEEAREIEEFFENILILSHRPHGNENSRFIYALNDISQVKNY
                     KQDIKIHLKIDTGMHRNGICVENLEHAIDLIQSSDLKLTGMFTHFASADEMDGSFFVQ
                     KENFQKAKKIVKKYFSNLLFHSHNSAALFRGKIPEDEYCRVGLVQFGYGDSNLKRVLS
                     LYAHRLSQRILQKGQSIGYGGIFTAAKDMEVATYDLGYADGLFRYNGKGELVLGNGKV
                     MLGKMSMDSFSCENSGEEICVFKDADIWADFFHTINYEILVKLNPNIQRVLV"
     gene            complement(21850..22827)
                     /locus_tag="RJ266_000720"
     CDS             complement(21850..22827)
                     /locus_tag="RJ266_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HDV7354490.1"
                     /translation="MLKRLALLIALSSLMLHASDLVKIYLNQGLDAVGVAIEKELTQK
                     DFWLSEIGDKNISLGYYDDNVAIVLTNKTDKILRVYSYEDGKIRKDFEQKEIITGLMG
                     DKKIEGDLKTPVGFYELGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYP
                     LDGSRLDEFKTRGCIALFNNNLEKFAKVVQDKKVFVMTEEKEKIRAKKDQIASLLADL
                     FTWKLAWTNSDTNAYLSFYDEQEFKRFDKMKFEQFASMKKSIFSRKEDKKIKFSDINI
                     SPYPNLENETMYRISFYEDYYTKNYRFRGDKILYVKIDSKGKMKILAEQ"
BASE COUNT         7688 a         4028 c         2858 g         8471 t
ORIGIN      
        1 tataagcaaa gaaaatggat aataataccc aaattctcca aataaaaata aattagcctt
       61 gtaaacccat tctcccatgc caggtgctag catacaaaga caaagataaa aaataacaag
      121 cgtggagctg gtaaaaatgg cttctttttt aatattcttt ccttgaaaat aaaatcaaag
      181 ccaaattata ccataaaaaa ttttacatat aatttaataa gctaagttga gaaattgttg
      241 tgctagcttt aagagaagct tgatatgcaa gttgaacttg cattaaattc atcattgcct
      301 caccataatc tacatcaatc acatttgatt ttatactttg gacattaacg cttaaaaagg
      361 atgtgcgtgt attaacacct tcgatagtat tatgatatgc tcccatagtt gtattaagct
      421 tgttaacatg atctgctaaa tgatcaagtc tttctaaagc tccttgcata cctgtatttc
      481 tagggttttc actttcggag tctgctctca tattgccttt taaaacagca tcaatcattg
      541 aatctaaatc tttaataata tccacatttg gctcatctat agttaaagaa ttattcgcgc
      601 taaaactaaa atttggacca ttttgtacag tagaagttgt ggtaaaagga ggtgctggaa
      661 attggccact ttgagaatca ctaagagaaa tttctatatt agtgcctgaa gaaagtttat
      721 cagtaacact aatacgacct ttataatcca tacttacatc aacagtagct tgtgaatctt
      781 tcatgagttg ttgtatttgg gtataatctg cattattaat ttgaccatta ttggcttgta
      841 tggttgttgt aggaatttta tctgcagcaa acatacctat aatatcatta atttgaccat
      901 aagtaatatc atttgatcct gtaacaaccc cactatttcc agttgcagga ttagtatgca
      961 taataggaaa gcttatggtt tgacctggat tattaggatc aagatagctt acagttgaag
     1021 tttgtaaatt tatagtaaca tcgtaagaat ttccaccttt ggaattgact tttaaattta
     1081 aagtagtacc atttaggcta tctcctgcca ttacctcgct aagtttggtt gaatcagtgg
     1141 cataagcatt gcttcctttg ataacttgag aaacattacc ataaacagta ttgccatttt
     1201 tttcaaaata cacattatcg taatcagctc cattagcagc atttccatct gtatctgtca
     1261 ttttactttt gataaaatca gtttgtttta aatcgattat gaattgttga ttgttgattg
     1321 ttacagttac agggttgttt aattttgtta tatctccatt actaggagta gccgtagcag
     1381 cttgcataac cctatttgta acttcattca ttgaaatacc ttcttgtttg gcagcatcaa
     1441 taatacctgt aagctcagtc ttatcatcag cttgtggtgt gaaagctaca gcgtgaaaat
     1501 cgagtttatt attgccttgt tttagatctg taatttgaat ttgaccacta tcattcatgc
     1561 ttacttctac tactttatta tttggagtat taccataaag agctccgata ttttccatta
     1621 catcttctaa agtatcttca ggttttacaa gtacagcgct tttaaagctt gttccatcag
     1681 gtttagtacc ttgaacataa agagttgttg gaggaaaatc tagtttacta tcatcatatt
     1741 cgaagtcttt gtcagcatct aagctattat cttttacata accttgtccg ataagctgtt
     1801 gccatttaga atctcctgtg agatatttag ttttatcagg attttgagta agatcccaac
     1861 gattatctgt aaaactaaca ttggtgctta tttgtttttt ataatctcca tccgctttaa
     1921 aaaataaatc ccagcctggt atattgtacg ggctttcagt tccagctcca gttactacat
     1981 taatattatt tttatctcca taataatttc cgttagaatc aaaaggtttg tttgcaactt
     2041 gagaacctgc aaaaagatac tgaccattaa cactggtatt tgcaagctga actatacttt
     2101 cttttatgcg ttctagttct tttgctatag cctctcttga ggtttgagaa ttgctatcgc
     2161 ttgcagcttg agttacttta actttaaaat cttcaagaag tttaaccatg tcttgtaaag
     2221 ctttcatgct attttgagtc atttcttgag ctctactagt tgattctttt acttgctcta
     2281 atgttttaat ttcatattca agacgcgtat tatctatata agtgcttgca tcttcatatg
     2341 aattttgaat ttttaaacct gaagcaagtt gttgagatat ctgatataaa gcactttgac
     2401 cgcccataga attattcaca ctatttgtga agttaagttt atttgtaatt ctcatttttt
     2461 tcctctaaag tattaaagtt aaaatctttt caaacattgc taataaacaa aagcaataac
     2521 tgttccaaaa atttaaatta tataatttta tattgtcttt ttgaaaatac tttttatttt
     2581 taaagtattt tttagcctaa aaaagtataa ttttagcttt aaatcttaaa aatgagcccg
     2641 agtggtgaaa ctggtagacg cgccagactc aaaatctggt aagggcaacc ttgtgtcggt
     2701 tcgagtccga cctcgggcac cacttatttt ttgcgggaat agctcagggg tagagcacaa
     2761 ccttgccaag gttggggtcg cgagttcgaa tctcgtttcc cgctccatag agtaaaaaaa
     2821 tataaaatct ttttaattat aaattctcgc ttttctctaa tactaaaaaa tactcatttt
     2881 ctagaatttc aagttctttt tgcattactt caagttcttg ataaagcttg ttaataccta
     2941 tttcttgata tacatttgga tcggataaat cttgatttaa tttagctatc ttttgctcta
     3001 aaaaatctat tttttcagga tggtttttta atatctcatt ttctttgtag ctcaattttt
     3061 tagagctttt ttctttttgg ttattatttt gctcttgggt ttgaagctct aaagcaaaat
     3121 tatccaattc ttcaatttct ttttcatttt caagatattc agtataaaga gtgtgtaaaa
     3181 tatttatata tccatttccc tcaaaagtat aaagttttgt tgcgatttta tcaacaaaat
     3241 atctatcgtg tgatactagc aaaatagccc cttcaaaact aagtaaatat tcttctaata
     3301 tattaatcgt agctatatca agatcattag ttggctcatc taaaatcaaa acatcatatt
     3361 ctttagtaaa aagcaaggct aaagcaacgc gatttttctc tccgccactt aaaagagcta
     3421 cgcttttatc taaaaattcc ttaggaaata aaaaattttt caaatatcca taaacatgca
     3481 tatttttacc acgaacttca accctatctc caccattggg gcaaaaaatt tcaagtaagc
     3541 ttttatcaga atttaccaag cttctagcct gatcaaaata tcctatctta agctctccgc
     3601 gttttatttc accgcaatct tgttttattt gccctagaag aatttttaac aatgttgatt
     3661 tcccacaacc atttcttcct acgatagcta tgcgttcacc ttgtaaaata cgcgttgaaa
     3721 aatctttaaa aagattttta tcgtttatat ttttgcttat atttttaagc tcaaaaagca
     3781 tttttttacg attgatcgtt ttttctccat taaaatttaa agccgctctt gaaatttcaa
     3841 gttttaagcg tttgattgct ccaggatttt ttttcgcttc ttcacgcatt ttaaaaatac
     3901 gttcttttcg tccttcattt cttttaagtc ttgctttaac ccctcttcta agccattctt
     3961 cttcactttt taattgcttt aaaagagttt catggctctt agcaaggctt tgcaaaattt
     4021 gtgttttttt ctctaaatag tttgcatatc cgcctttaaa aatactaagt ttaccctgct
     4081 ctacttctac acacttgtgt gctatagcgt caataaaata tctatcatgg gaaataaaaa
     4141 tcacacacat ctttgaattt tttagcaatt cttccaaaaa gcttgtcata tatacatcta
     4201 aatgattagt tggttcatca agcaataaaa tatcaggatt ttttagtaaa agtatgcaaa
     4261 gtccaacgcg gcgtatttct ccaccactta aagtagatat aatgcgactt tcatactcaa
     4321 gcaaactaaa ttcttttaaa acgcgtatta ttttagattc tatattccaa gcatctttac
     4381 tatcaatcaa agtcataagt gtatctattt ttttaagata atctttatta ctaggatctt
     4441 cttctaattt tttatgcagt atttcatatt cttctaaggc attgtaaatt tctgcaagct
     4501 cttgtttgat agcttctttt acacttaaat ttgcattaaa atcaacggtt tgtgaaagca
     4561 tggctatgct ttttccattt tgtcttatta ttctaccgct atctaaagga agtgtgccta
     4621 aaagcgtttt taaaaaagta gattttcctt ctccattttt gcctataatg gcaatctttt
     4681 ctccctcgtt tgcactaaaa tttgcttcat ttaaaactat tttgtctcca aatttttttg
     4741 aagcttcgat taaatctata agagccattt tttatccttg actgagttta aagctaaaac
     4801 tagaaccata gcctaaagtg ctagaaattt caagataact tttatgtata tttaaaattt
     4861 tctttactaa aaaaagtcct aaaccaaaag aattatcact ttttacatca attttataaa
     4921 atttttttgt aatcaatttt attttatctt cttctatgcc ttttccaaaa tcttgcacta
     4981 ttattttttg atctcttgct gttaaaatga cttctttttg actatatttt aaagcattag
     5041 aaagcaaatt tataatcact tgctcgatta aaaattcatc agccttaact ttcgtgcttt
     5101 taccttgcaa tacaactctt tcaaagcctg ggtttttagt gattttttca catagaaaaa
     5161 aaagatcaaa ttcctgcatt tgcaaggctt cactattaag attaaaaaca aaattaagct
     5221 tatgggtcaa agcattaagc ttaatgcttt gacgcgaaat tttttctagt aattcctttt
     5281 ttaatttttt atcttccaat ttctcgtctt ttagcatctc taagctaaga tcaatcacgc
     5341 ttaatggatt tttaagctca tgagaaatag cagaaatcac actagcaagc tgagtatttt
     5401 ttaaagtaat tttatcgctt tgttttttat ttttttgggt attctttaga attttatcct
     5461 tagtttttaa aagtttctca tttagtaaat taaattcttt aaacattcct ttttctaata
     5521 taacaacttt ataatcccct atagaatcca aaaaatccaa aattttatta aaatttttct
     5581 ctattcttct acctaacaac aacattaaga taaaaacaaa cagcaagcat actccaaaac
     5641 cgattgccat ttttgtccaa aaaagttcta aatctaaaaa acgaggataa acaataataa
     5701 tatatttata tcctttgcaa ataaagcttt tagtgagaat tttttttgaa ttgaaattta
     5761 aaatttctcc ttctttaaga ttagaaaaaa aatcaggatt ttttacagaa cttattttca
     5821 tatcattgtt taggataata aaatcagccc tagtatcttt agcaaaatcc ttgatattag
     5881 catcatttaa atgctctaag agagaaaatt ttaaaacatc atcaaggctt ttgatttttt
     5941 gttcatattg ttttataagc aagaaattaa gataagaatt agtaaaagta taaaaaataa
     6001 acccaaaaat caaagccaat acaacaaaaa aaactataaa aatattttta gtttttagca
     6061 taatttatag ccaatacccc taacacttat aatatgatct tttagttttg gaaatttatt
     6121 tctaagtctt gttagagcta tattgattgt tttatcactt gtagtatcat ctttccaaac
     6181 actttcgctt aaaaattgtc tagtaagcaa ggtatttgga ttttcaaaaa aacattttaa
     6241 aagctcatag tcaagatttg agatttctaa tttttgattt ttgtaaaaga attcataact
     6301 aaccaaatct aaaataaaat caccaaaaga tagtttttct tcttcttttt tatggcgttt
     6361 taaaattgct ttaatgcgaa gtaaaagctc attgaaatca aaaggtttac aaacataatc
     6421 atcacaacca ctttcaaagc cttcgagtaa atcttgatgt aaagccttgg ctgtaagaaa
     6481 aataactgct tctttatatc cttgctctct taaatcttga attttttcta aagaatctcc
     6541 actgggcaaa tttctatcga ctattaaaag atcaatttgc tcattatcga gcaaatcttc
     6601 aactccaaaa aaatccgcta aagatataac ttcataacca ctagatttta actttaaaac
     6661 aagcagttcg tttaaatcta tatcatcttc tataattaaa attttaaatt tcaacatatt
     6721 ggacaaatac acacgcctct aattgtttta gttcatctaa tacttctttt tgaacttttt
     6781 catcaatcaa aacaacagcc aaagcatacc caaaaccatc tctaccaagc ctaaaatcag
     6841 ctatgttgat atttttagct gccaaaacgg aactgatttt agctataact cctggtatgt
     6901 ctttgttttt aaaaataatc atttttccct ttggcttaaa atcagtttta aagccattta
     6961 atccaactat gcgttgttca ttttcattaa acactgttcc tgaaacactg atatttgaat
     7021 tttcggtgat aattttaacg ctaagtttat tattataacc actatttgga agagtttcgc
     7081 aagataattc aactcctttt tctttggcaa caaattctgc attaacataa ttaattttct
     7141 ctcctaaaat tccacccaaa gcaccaacag ctgtaaaagt tagcatagaa tttgcatact
     7201 caccaataat tccttcagcc tctaatttaa tactttttat aggattttta tcaatttgaa
     7261 cagctaaaaa agccatttta gaaacaagtt ctatataagg agctacaaaa ggtggtaaat
     7321 cttcagtttt aattggtaaa tttaaggcat taggataagc cacgcctcgt gctgcgctta
     7381 atgcttgctc acaagcttct cttgcgatat tgtcttgact ttctaaagta tttgctccta
     7441 ggtgagaagt aactgaaata ttttcaaagt ctaaaagagg atgattagtc gcgggttctt
     7501 tatcgaacac atctatacca agccaagcta ttttaccact ttttaaacct tcatataaag
     7561 cctcttctgt gtacaatcct ccacgagcac aatttattaa tcttattcca tctttcattt
     7621 ttgcaatttc ttgctttcct atcataccat tggtttcttt ggtttttggt gtgtgaatgg
     7681 taataaaatc acttttttct aaaatttcat ccaaattttt tgcttgttcc atatctaaat
     7741 ctgtaatctt agaagcagaa atatacggat cataggctaa aattttcata ccaaatgctt
     7801 tagcacggat agctactctt gaacctatat ttccaaaacc tataacccct agcgttttat
     7861 tcatcaattc aatgccatac catttttctc tttcccattt tctttcaatt tttaaaaaat
     7921 tatgagcatt gacaaagctt ctagctgatg ttaaaagatg tgccattgtt agttcaactg
     7981 cggcaatagt atttgcagtt gggacattca tcacaatcac tcctcgttta gaacactctg
     8041 gaatatcaac attatctacg cccaccccag cacgcacaag cgcttttaat tttttggcat
     8101 gatttaaaaa atttacatct acatccgtag aacttctagt aattgcaact tcaatatcgc
     8161 ttagcatttg cataagttca tcttttggaa attttgcagc ttctataagc tcaatatctt
     8221 cagcttttct tagaatatcg acacctttat ccaaaatagc atcacacact ataatctttt
     8281 ttttcataac caaatttcct ttacttctgt atttatttta tattttttta attctttgat
     8341 aatatcatct ataagttttt cattgcctgt atccaaaaag atttctggac tatcgccaga
     8401 tttaagaaga aaatacttca cattaaaaga atttaaagtc tgtcttaagc aaaacataga
     8461 ataaatatca tattttccaa ctataagttg ataatattta tttttctcct taagctcgct
     8521 agtatccgca tcaaaatata aggtaaattt ttctgctgct ggggtaaaat ctcttgtagg
     8581 ccattttgct aattcttctt gccatgaaag atcttgattt tgggtttgaa tgcttggctg
     8641 cgtatttgta tctttagcaa attgtggaat gaaatttaca ttagctttaa attgccaaag
     8701 caatgtaaaa acaacagcaa gcaaaatgag taataaaata ctcaaaatgc ttattgtaat
     8761 gtattttttc attaagctag ctgatcttta atgatatcac ctaaagttac tttatcatca
     8821 ttattgattt cattaagaac ttctctttct tttattctaa caagattttt aacacttagg
     8881 cgaattctat ttttcttttc atcaataaaa actatagcag cttcaatatc gtcgccaatt
     8941 tttaaatttt caagcataga agtgcttata tcttctttat gaattaaagc atcaacattt
     9001 ttacttagct ccacaaaaac accaaaatct ttaatatcac ggatagcacc ttttacaata
     9061 tcgccgactt tatgaatttt agcatattct tgcactggag aactgcttaa ttcttttgta
     9121 cttaatgata ttttttggtt ttctttgtct attttgataa tttttacctt gattttatcc
     9181 ccttgagaga atttgtcttt gcatttatcg tttctatccc aagaagcatc ttcattatgc
     9241 aataaacctt caataccacc aagtttaaca aatgcaccaa aagaagttac tgaggtaatt
     9301 tctccttcaa ccacatctgc aattttataa gatttcataa attcatcaaa aggtctagaa
     9361 agtaaatttc ttaaagaaac ccttaagcgt ctttcatttg gattgatttc aattacttca
     9421 acatcaattt cttgaccttt attgatataa tcttttggat ttttaatatt tttatcccaa
     9481 gaaatttcac tgatatgtaa aaatccttct atatcatttc ctaaatccac aaaagcacca
     9541 taaggctcta tatttgatac tattacttta atggtatcac ctacatcaag agtatctttt
     9601 atctcgctcc atggatcagg taaagccgct tttatagata aggataaatg tttgcgttct
     9661 ttatcatact ttattacttt aactggaact ttatcgccct ctttataaag tgttccaggg
     9721 tttacaggtc ctttgtaaga aatttcgctg taatgaacaa ggccatcaac acctcctaca
     9781 tctacaaaca taccataagt ggtaattttt tttacaatac cttcaattaa atcttcttgt
     9841 tgtgctatat tattgatcaa ttcttttcgt tttcttctct catcatctaa agttttttta
     9901 cgagaaacaa tgatactttg ctcatctttg tcgattttaa taattttaac tttaaacgtt
     9961 ttgcctataa tattatttgt ttctttaaag ccatattgag attttggtaa gaaaaattca
    10021 acatcatttt catcaacaac tatcaatccg cctttatttt ttccaactac ttttacggta
    10081 aaaatatcat cttgattttc ttgatagttt ttaataaatt caataactct ttcttttctc
    10141 aaagcttttt tatgagaaag taaagatctg ccaccacgag aacccataac agcaacttta
    10201 atactatcgc ctacattaaa caatagctta gaattgtcac cttgtatttc gctaagagct
    10261 aaaatacctt cagatttttt acctatatct acataaactt catcattttt gatctctaca
    10321 atcacaccct ctgttgtagc ctcttctctt gatttatcaa aagcttctaa aagctgtcca
    10381 aaatcttctt cctcaagata atcatctacg ccgccttgaa cttttttgtt cacctcgctc
    10441 attatggtcc tttaaaataa tttttagaaa ttgattgatt ttaccttatt tttctttaat
    10501 tagtgttaag tttttttatt tttgttaatt ttttttaaat ttttgacttt tttattctat
    10561 ttgaaaacat tttttaatta attttaaaat tttttatttt ggcgataact ttttgtatga
    10621 tccaatcagg agtactagca cctgcactaa tgccgcaatg ttttttatcc aaaaaccatt
    10681 ctttttttaa ctcttcttcg gtttcaatta gatagctatc ttcacaattg gtttttgcaa
    10741 ttaaaaaaag ttgttttgta ttggctgagt ttttaccccc tacaacaacc ataacatcac
    10801 ttttaagcga gagttcttta atggcatctt gatttttaaa ggttgcatca catatagtgt
    10861 taaaaactct tacttctttg gttttaagta ttaaaaaatt tactatctcc ataaaatgct
    10921 caggcttctt agttgtttgg cttactacag ctattttatt aggaagtttt atattttgaa
    10981 gttctttttt atccaaaact acataagctt ttgtacttac ataacttttg actcctttaa
    11041 cttcgggatg attttcatct ccaaaaataa caacttcata accctcctta ctcatttgct
    11101 cgcaaatttg ttgtggtttt gtaacaaaag gacaagtggc atcaaaaatt tctatatctt
    11161 tttttctcaa ttcttctaaa tcttgctttg taataccatg agttcttata atagcctttt
    11221 tttcattact taaagcttgt atattttcca aagttttgac attaaaattt ttttgcaaac
    11281 gagaaatttc ttcgttattg tgaataagag ggcctatagt tgcggcatct tttatttgtt
    11341 ctgctttttt aatagctctt ttaacaccaa aacaaaaacc atagtttttt gctaattcaa
    11401 taatcaatcc tagctcctaa atttgataaa atctctataa aatttggaaa agaagttttt
    11461 atacaatcac tatcatcaat ctcgattccg caaagcaaac ctaaaatagc aaaactcata
    11521 gcaatacggt gatctccata gcttttaatt tttgaagatt ttagttcgca tccaccttct
    11581 atttcaaaac catcatcaag ttctctagct tcaacaccac aaagctttag attttcaacc
    11641 atcacagcaa tcctatcgct ttctttaacg cgtaattctt tagcatttat taaactagat
    11701 ttacccttag ccaaagcaaa agctatagcc aaagcaggcg cttcatctat taaccaagcg
    11761 atattatctt taacttctat gccattaagc ttgctagact ccaccctgat ctcaccaata
    11821 gtttcaaaat cattttgagt tattgtcatt tcaagtttgg cacccatttt ttgcaaaatt
    11881 ttatacgcct ctatacgagt aggattaagc aaaatatttt ttaaaataat ttgagattta
    11941 ggcaaaataa tagctgctaa aacaaaataa aaagccgaag aaggatcatt aggaatgatt
    12001 atattttgag cttttaaagg tttttttaaa ggacttattt caagacttaa gccatcattg
    12061 ctaaccctta ttggagcttt catagccttt aacatgtttt cactatgatt tcgactaaga
    12121 gaaatttcac taaaagtgca tacattatca gctctaaaag cagataaaat catagctgtt
    12181 ttaacttgag ccgaagaaat ttcgctttta aaattaaaag cttttaattt ttgaccttct
    12241 atacaaagtg gagctaaatt tgcctcattt cttccataaa ttctagcgcc tatttgagta
    12301 agtggtttgc ttatccttct cataggacga ttgtttaaat acttatctcc acttaaaaca
    12361 aaaaaaccag aaattcctgc taaaaatcct atcatcaaac gcatagcagt tcctgaattt
    12421 ccacagtcta aaatacaatt tggagataaa atttctttag ggggtataat tttgacgcaa
    12481 gaatcttttt gttcaatttt agctccaaga ttttttataa tttcaagagt gtttaaagta
    12541 tcttgagcta agagataatt ttgagcctta ttttcttctt gtgttaaaag cgaaaatata
    12601 gcaaaacgat gagatatgct tttatctgct gctatatttt caagtatagc atttacaggg
    12661 gtttgcaatt tgtaaatttt catcttaaat caagacccaa atttttaaga gtatttaaaa
    12721 ttttatccat acattcattc acttgattat cttctagagt tttatttata tccctaaaag
    12781 aaaaacttat agtaatgcta taaaattctt taaggttttc atcactataa atatcaacta
    12841 aacgaaaatt ttcaagtatt tctaaattca attcttcgat acaattttta atctgattgt
    12901 attcaaaacc tttaggtatt aacacgctaa gatctctagt gatagctggg aatttggagt
    12961 aaggcttagc tattttaaaa tcttgcctga ttaaatctaa atcaagttcg caaatatatg
    13021 tttttggtaa atctctctca ttttctattt ttaaatgcaa acggcctata aaacctactt
    13081 taatatccga tagataaata tctgcttgtt cataagggct taaaatatta tattttgatg
    13141 attttagttt aaaatcacct ataatatttt taatatctaa aagaaaatca taaaattgca
    13201 ccgattcagg tttggccttg ttggaaattt tagcttcttc ttttaagcca gaatggataa
    13261 atgcaatacg atttaattct tgattattaa cattgaaaac agcccctaat tcaaaaagtt
    13321 taataatttt tttagaattt tttgcattta aacttgctgc atttaacaaa tgatttaaaa
    13381 gggttgttct taaagtatta agttctgctg taattggatt gattagtttt aatttaacag
    13441 agtcaaaacc taatctttta agttcttctc cattatccaa aacataatgt aagctttcaa
    13501 aataaccact agctactgct ctttttctta aatttaaaaa ctcaatataa tttttatatg
    13561 cagaatttaa acgatttttt tctataaatt ctaaaccctt ggaagcaata ttatcaatac
    13621 ctataattct tacaacttcc tcgcaaatat ctgataaatt tttaatatca ggacgatgta
    13681 aaggtgcttt aacatttata agcccttcac ctgaaagtat gagctcaaaa cctaatttct
    13741 ttaatatttt taatacttca tctttatcaa cattttgtcc tattatatcg ctaatacctt
    13801 caatacttat tggtatgatt ggtaattctt tgtcagttaa aatttgttga gaagaactat
    13861 aaataacaag atttggaatc tgctcaaaaa taccaagcaa aaaatccatt cctaaattta
    13921 atttaggttc acttccccta aaacttctat aaagcatttt ttcatcttga tctttatgat
    13981 atattttagc atctgcaatt accaatggat cggtataatt agcctcaata ataattattt
    14041 tagaatcatc tttacatcta ctttcattat tttggaaaat tccgctaaag cttaaaagtt
    14101 tatctttgta agatactttt gtttctccat gcacttgctt gcttaaatta atggtaaatt
    14161 cttcatcttt ttcagaaaaa ctacttaaat cataagcatt aaaaagaaca ccagttgaat
    14221 gcgttgcata atttaataaa ttttctatgg aattttttcc caaaccttca atttgagcaa
    14281 gtcttaaact aagcaataaa tttgtttgaa tttcttcttt tagccctatg gctcgataat
    14341 tataaagtcc attaagttct ttctcagctg ctaagcgcaa aattctaccg atacctaaaa
    14401 cattttcact ttctttaaat ggttttggtt cttttaaatt taaatttaaa gctgcggcta
    14461 aatcacgagc tataccataa atacttaaac aatcacccct attaggagta agttccactt
    14521 ctattagctc atcattaaaa atttcataag tatttaaagg tctcccaagt tctaatttcc
    14581 ctatactctc atctaaaagc ataattcctt cattgatttt ttcaaaaccc agttctaaac
    14641 tagaacaaag cataccacaa gaatccactc ctcgcaattt tgcttctttt atttccatac
    14701 cgtttggcat gatagcacct ttagttgcaa cagctacaaa ttgtcctgca tcaacattcg
    14761 cagcaccgca gacaatttgc aaggtttcac ttccgatatc aacttgacaa atgcttaatt
    14821 tatctgaatt ttcatgttta attttttcct taacatagcc tacaacaact ttatctggag
    14881 cctttaaagc gccaacccta tcaacttcta tacctataga gtttaaagtt ttagctattt
    14941 tatctgaact tatttcttca agttctaacc aatcattcaa ccaactttta gtaattatca
    15001 tctaaactgc tccaataatc tcaaatcacc ttcaaataaa gatcttaaat ctggaatttg
    15061 atgcaaaagc attgcaaaac gctctactcc caatccaaag gcataaccac ttacattttc
    15121 ataaccaaca aaattataaa cattaggatc aactattcca catcctaaaa cttcaagcca
    15181 acctgtatgt ttgcaaactc tacaaccctt tcctttgcaa aatacacaag aaatatcaac
    15241 ttcagcagaa ggctctgtaa atgggaaaaa acttggacga aaacgaactt tcacatctcc
    15301 gaacatataa cgcaaaaaat cttccaatac actttttaaa tttgcaaagc taaccttttg
    15361 cccttcttcc accacaaggc cttcaacttg atgaaacata ggagtatgcg taatatcaaa
    15421 atctcttcta aatacagcac caggggctat catcctaata ggaggttttt gtgcaagcat
    15481 tgtccgtatt tgcactggcg aagtttgtgt tcttaaaagc cttttatcat caaaataaaa
    15541 ggtatcttgc atatctcttg cagggtgaga tttaggcaaa tttaacgctt caaaattatg
    15601 aaagtcatct tctattaaag gccctttttc tatgctaaaa ttcaaagcta taaaatactc
    15661 tatgatttta tccatggtgc tcataacagg atgcaaggca cctgttgtaa tactttcatc
    15721 aaaatagtta aaatttaaag catcttgttt cattctttct tctaaagcaa gattttccaa
    15781 atctttaaat ttggctaaat aagcctcatt aaatatttct ttttgtgcat ttagtttagc
    15841 agcaaattct tttttcgcct catcttctaa ctctttaagc tttgtaaagc cttctgttaa
    15901 aatacctttt tttccaagaa cggaaatcct aatggcttcc aaatcattta aattctcaca
    15961 tttttgaatc tgttctataa aattttgcaa ttttcttacc ttaaataaaa tatttcaagt
    16021 tctaattcta ttaaaaacta ttttaaattc agcataaaaa ccaaacttta aagatataat
    16081 tgtatcaaac caacaataaa aaaggataaa taatgcaaga aaaaacaatt tttgaactca
    16141 tagttgaagg taaacttcca tgcaataaag tgcttgaaag tgacgatttt ctagcatttc
    16201 atgatattgc acccaaggca cctatacata tacttataat ccctaaaaaa cattttaaag
    16261 actttcaaga atttgatcct gaacttatgg gcaaaatgac aagtttcata caagaattag
    16321 ctgttctttt aggtgtagat aaaagtggat atcgcttggt aacaaactgt ggaaaaaata
    16381 gtggacaaga agtttttcat ttgcattttc atatgcttgg aggttttgaa ctgcctaagg
    16441 aaaaaacaaa aaaagaaaat cctcaagctt tattttaatt taaatggtag aaaaactacc
    16501 atttaaacta ttttgtcaaa ggtagcaaca ttccctcata taatttttga taaatttcat
    16561 caccgcataa ctttttagct agttctaaac caaaaagaat tgccgtagct ggacctgctg
    16621 aagttataac atttttattt acaactacag ccttgttaac acgatttcca ttaagtccaa
    16681 cttcacaact aggatagcaa gcaaactcgc cctctaaaac acctgcttca tttaagacta
    16741 taggagaagc acagattgcg gcaacaattt tatttttgct atgaagttgt ttaatgatat
    16801 ttaaaataac atttgaattc ttaagattca tcataccttc aaagccaccc gccaaagcaa
    16861 tggcatctaa attttctata tcaacatcct ctatagaaca atctgctttt atactaatgc
    16921 cgttagcacc ttttactaat aactcactgt ttaacgaagc tataacaact tccaaatctg
    16981 gatttaattc tcttgctcgt tttaaaacat ccgcaattcc tataaattca gcttcctcaa
    17041 aaccttgagc caatggaatt aatacttttt tactcatttt gttctccttt tttatatttt
    17101 ttaaatcttt cttctctttc tttgtttttt tgcatcattt gacgattaaa acctatgacc
    17161 aaaacaatca ttaaaaacac aaaaataact attagaatga aatctaaaat ttccataaat
    17221 acaaccttat ttttgggaaa ttctaacaca tttttttaaa tctttagaga aaattcaaag
    17281 atatttctat aaaatctttt tttaaataat ttctctgaaa aggtttacaa attgaatcag
    17341 aaaaatataa gaatttttgt ttttttgtta ttattatttt atggggctat ttttctttcc
    17401 cgatagaaat attaaaaatt caagatccta gtggagttgt aagctatggc tatacagaaa
    17461 atgcaaaagc ttatttaaaa agttatctta ttacgctttt attaactgct tgtgctgtta
    17521 ttatcggagt gattattggt tttagcttag ctattttacg cttctctaaa tttaaaacac
    17581 ttaattttat tatagatgaa tatatagaca ttatacgagg aacaccggta attttacaat
    17641 tgatgatttt tgcttttgta atttttactt ttatagacaa cctttatgca gccattcttg
    17701 cactaggact taatagctcg gcttatatag cagaaattgt aagaagtggc attaatagtg
    17761 tagataaagg acaaatggaa gctgcaagag caatgggact tgattacaaa acttcaatga
    17821 aagaaattat tcttcctcag gctactaaaa acattctacc tgcattagct aatgaattta
    17881 tttctttatt taaggaaact tctgttgtag gatttattag tgttattgat attaccatgc
    17941 aaagtcaaag cttgcaagcc gtactttaca atccaaaacc tattattttc actggacttg
    18001 tttattacgt aagcgtaaaa atttttagct attttgcaaa aaaacttgaa cttaggatga
    18061 ataaaaatga ttgaagttaa aaatttacaa aaaaaatatg gagaattaga agttttaaaa
    18121 aatattaaca ctacaatctc aaaaggcgat gtaatagcta tcataggtcc aagtggaggc
    18181 ggaaaaagta catttttacg ctgcatcaat cgcttagaac tagctgatag tggggaaatt
    18241 ttaatcaata aacaaaacat acttgataaa gaaattgata ttaataagat caggcaaaaa
    18301 gttagcatgg tatttcagca ttttaatctt tttgctaata aaaatgttat ggaaaattta
    18361 tgtttaacac ccattaaaac aggaatttta agtcaagaag aagccataaa aaaagcaaaa
    18421 atacttcttg ctaaggtggg tttagcagac aaagaaaata taatgcccca taagctctct
    18481 ggcggacaaa aacaacgcat agctattgct agaagcttga tgatgaatcc tgatgttatt
    18541 ttatttgatg agcctacttc agccctagat cctgaaatga taggcgaggt tctaagcatt
    18601 atgaaagatg ttgcaaaaga aggtttaact atgcttgtag taactcatga aatgggcttt
    18661 gctagaaatg ttgccaatcg tatatttttt atggataaag gaaaaattgc tgttgatgca
    18721 agccctaaag aagtatttga aaatcctagt aatgaaagat tgagagaatt tttaaataag
    18781 gttttaaatc attaattcat aagccattaa ggcttatgaa ttttaatccc aacattcagc
    18841 gtttttaatt ccaagtttgc tagcgttaaa tttaggatct ataccagatt tttgttgcgt
    18901 attaaaatct tttaaaactt tatttactat accacctaaa agcaataaag atataatatt
    18961 tgtcgttgcc atgaaagcca tagtcaaatc agccaaattc caagcaagtt ttaaattcat
    19021 ttgcgagcct ataaaaatca tagccacagc tgtaattcta aacaaattca ttacaaattt
    19081 ggaatttgtt aaatatttaa cattagcttg agcataataa taatttccta ttaaagaagt
    19141 tattgcaaaa agaacaatgg ctatagtaat aaaatggatt ccaaagctac cataatactc
    19201 acgcatagct tcttgaacta aaggcattcc accatcgatt ttactttctc caagtcctaa
    19261 atatgccata gaaaaaagaa ccaaaaatcc agaacttgta caaacaacaa catcaatcaa
    19321 aactgaaaag gcttgtataa caccttgttt ggctggatga cttgtcaaag ctgctgcagc
    19381 tgcattaggt gccgagccca tacccgcttc atttgaaaaa agtcctcttt taatccctat
    19441 aactaaagca gaaccagcaa aaccaccaaa aatcgcttta aaatcaaaag cactttgcaa
    19501 aatcatatga accacagaag gaattttatc aaaattcatt aaaacagcaa tcacagcaag
    19561 caaaacataa gctaaagcca taaaaggaac aattaaagag ctgattttac ctattttagt
    19621 atgatgagaa aaaaacatcc atgcaccaaa aatagttaaa acaataccaa taatcattgg
    19681 ccaagaactt gatgtaaaat ctacagcagc atttggatta aacatatcat aataaacttt
    19741 aaaagacgaa gtcattgttt gactttgaag tccgttaaat ccataagcat aagtaataat
    19801 aagaataaaa gcaaaaaaag ctccaaaaaa atgtgagcct aaggcttttt ttatataata
    19861 agctggccca cctttaaatc cacctgtatc atcttttgat ttgtaaactt gagctaaggt
    19921 gctttcagca aatgctgagg caccaccaaa aaatgccata acccacatcc aaaataaagc
    19981 accagctcca cctgtagcca atgccaaaga aattccagcg atatttccta taccaactct
    20041 agaagcagtt gagatcatca atgcttgaaa aggtgaaata tgttctttag tgtgtccttc
    20101 gtttttttct gtaagaattt taaatacaga actcaacata cgaaactgaa caaagcgagt
    20161 taaaaaacta taataaagcc cacaaacaat aagtaaaact accataataa tgtctgtatt
    20221 tgggacaatc ttattagcta taatatcaga cgctttattg gcaaaatcta gcataatatc
    20281 taaattcatc caaactcctc aaaaaataat ctaaatttta ctttaacata atttttataa
    20341 aaaggacttt atgattttat ttgttttaag ttattgtgta aatttgaaac ttttaagaaa
    20401 caaaattgct aaaattttgt cttaaagctt cataagagat tataccaacg cttgtagcta
    20461 aatttaaact tcttccataa gatttcatag gtatagttat agcattttcc caatttaatt
    20521 gcattaattc cataggtaag ccataactct cacttccaaa gaataagaaa tcattttttt
    20581 gaaattctgc atcaaaataa gctttttgac tcttagttgt tgcgaaaaaa aagcgatttt
    20641 tataaataat attttcattt aaaaattctt caagattctc ccaaataata ggctctaatt
    20701 tatcccagta atcaagccct gctcttctaa cagccttttg agaaatatca aaaacagttg
    20761 gtttaacgat atgaagttta aaaccggcat taaaacacat tctacctata ctacctgtat
    20821 tttgtggtat tctagggtga actaaaacta tattaaacat atttatacta gaactctttg
    20881 aatattagga tttaatttta ctaaaatttc atagttaata gtatgaaaaa aatcagccca
    20941 aatatcagca tctttaaaca cgcaaatttc ctcaccagaa ttttcacaag aaaaactatc
    21001 cattgacatc tttccaagca ttacttttcc atttccaagc actaactccc cttttccatt
    21061 gtatcggaaa agaccatcag cataacccaa atcataagtc gctacttcca tatcctttgc
    21121 agcagtaaaa atgcctccat atcctatact ctgtcctttt tgtaaaatcc tttgacttaa
    21181 tctatgagca tacaagctta aaactctttt taaatttgaa tccccatatc caaattgaac
    21241 aagcccaact ctacaatatt catcttcggg aattttccct ctaaataatg ctgcagaatt
    21301 atgcgaatga aataataaat ttgaaaaata tttttttact atctttttag ctttttgaaa
    21361 attttctttt tgaacaaaaa aacttccatc catttcatct gcactagcaa aatgtgtaaa
    21421 cattccagta agttttaaat cactactttg aataagatct atagcatgct ctaaattttc
    21481 tacacaaatt ccattgcgat gcatgcctgt atctattttt agatgtattt ttatatcttg
    21541 cttgtaattt tttacttgag aaatgtcatt taaagcataa ataaatcgag aattttcatt
    21601 accatgagga cgatgtgata gtattaatat attctcaaaa aattcttcga tttctcgagc
    21661 ttcttcttca ctcttaacag caacaaaaga aactcctaaa tttttggcta atggagctaa
    21721 aagcttagct ccatgtccat atgcattatc tttaaaaaca caaattaatc tttgaaaact
    21781 ccctattttt ttagcaatat gtcttaaatt gtattcataa gctttttgat caatttttat
    21841 taaagacatt tattgctctg ctaaaatttt cattttacct ttactatcta tcttaacgta
    21901 taaaatttta tcgcctctaa accgatagtt tttagtgtaa taatcctcat aaaatgaaat
    21961 tctatacata gtttcatttt ctaaattcgg ataagggctg atattaatat ctgaaaattt
    22021 aatcttttta tcttctttac gagaaaaaat agattttttc atggaagcaa actgttcaaa
    22081 tttcatttta tcaaaacgtt taaattcttg ctcatcataa aaacttaaat aggcattagt
    22141 gtcactattt gtccaagcta gtttccatgt aaaaagatca gccaataaac tagcgatttg
    22201 atccttttta gctctaattt tttctttttc ttctgtcata acaaaaactt ttttatcttg
    22261 cacaactttt gcaaatttct ccaaattatt attaaataaa gcaatacacc ctcttgtttt
    22321 aaattcatca agtctagaac catctaaagg atagccatgg atccaaatac caccacctgt
    22381 ttttccttgt actttatcaa gtaaatttgg ataagttgtg gcaaaagcaa agggaccata
    22441 ataaggatca cctggattaa acttacggcc taactcataa aaacctactg gagttttcaa
    22501 atctccttct atttttttat cacccattaa tccagttatt atttcttttt gttcaaaatc
    22561 ttttcttatt tttccgtcct cgtaagaata aacacggaga attttatctg ttttatttgt
    22621 aagcacgata gcaacattat catcatagta tccaagtgaa atatttttat ctcctatttc
    22681 acttaaccaa aaatcctttt gagttaattc tttttcaatc gctacaccaa cagcatctaa
    22741 tccttgatta agataaattt taacaagatc tgaggcatgc aacatcaatg aagaaagtgc
    22801 aattaataaa gcaagtcgtt ttaacaatgt ttttccttag gtatttcaaa ttttttaagt
    22861 caaaaatgtt tgtgattata atattttttt tcttaaaaaa tattaattat attaacaatg
    22921 cagccttatt tatgatataa tttttacaaa tcataaaggc ttgttttaaa aggttgttta
    22981 taatgataag aaattttttt ataggaatgt cttttttagg cattttgttt ttagcttttt
    23041 ataca
//
LOCUS       DAPIWB010000023        22741 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.024, whole genome shotgun sequence.
ACCESSION   DAPIWB010000023 DAPIWB010000000
VERSION     DAPIWB010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22741)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22741)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22741
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.024"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            116..1915
                     /locus_tag="RJ266_000721"
     CDS             116..1915
                     /locus_tag="RJ266_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin attachment protein"
                     /protein_id="HDV7354491.1"
                     /translation="MAKKFIDVMDTSFRDGFQSVYGARVLMDDFFPAVEAAKEAGITH
                     FEFGGGARFQSLYFYLNEDAFTMMDRFRAIVGKDANLQTLARGVNTVTLDTGSSELID
                     LHAKLFAKHGTTTIRNFDALNDINNLKFSGECIAKHGLKHEIAITLMDLPPNCKGAHD
                     VPFYEKILKEILAAEIPFHSICFKDASGTSNPNKIYETIKMARKILPQDMHIRLHTHE
                     TAGVSIACYLAALEAGVDGIDLAAAPVSGGTSQPDILTMMHALKGKDYDLGGLEEEKI
                     LKYEEVLKDCLKEYFLPPEATIVNPLIPFSPMPGGALTANTQMMRDNNILDKFPQVIH
                     AMREVVEKGGFGTSVTPVSQFYFQQAFNNVMFGSWKKIAEGYGKMVLGYFGKTPVAPD
                     ANIIELASKQLNLEPTTELAINIADKDESKSIAYTKTLLEKEGIETSEENIFVAAACK
                     EKGIAFLKGEAKVNIRKLASMPKPMSADENKFTVAVNGNKYHVEVSYGFDKDVNVKSV
                     KKVEENKNIISSNSTSSVDAENEVLAGISGNVFKIYVNEGEEVKSGQAIMVLEAMKME
                     IEVNAPKDGIILELCIKIGDTVNEGEVLAIYKN"
     gene            1928..3502
                     /gene="pckA"
                     /locus_tag="RJ266_000722"
     CDS             1928..3502
                     /gene="pckA"
                     /locus_tag="RJ266_000722"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HDV7354492.1"
                     /translation="MKKFDKLGLDNIKEIFHNLSYDELNAHEKANNEGLSTDNDTFCV
                     DTGIFTGRSPKDKYFVKQDPSSKYIAWGKVNQPITKELFDKLLTKAKQELSGKKIYVQ
                     DVFCGASLQSRKAVRFVTEIAWQAHFVKNMFIRPSQEELENFKADFIVYNACKCINED
                     YKQDSLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANV
                     GEKDDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLDPE
                     HEPEIYGAIKRNALLENVVLRADKSVDYADASKTENTRVSYPIEHIENHEPSLKAGHP
                     KNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEP
                     FMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGS
                     ITKCEFENFEVFDLAIPKALEGVESVLLNPINTWLDKNAYIATRDKLAHMFIQNFKRY
                     EDVKEGIEFSKFGPKI"
     gene            3512..4894
                     /gene="argH"
                     /locus_tag="RJ266_000723"
     CDS             3512..4894
                     /gene="argH"
                     /locus_tag="RJ266_000723"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HDV7354493.1"
                     /translation="MKNEMWSGRFSDASDELLKEFNASLNVDKTLFNEDIQGSIAHAT
                     MLESCGILKKEELDAIIKGLEQVRSEIEQGKFIFDIKDEDIHMAVEKRLSEIIGSEIG
                     GRLHTARSRNDQVATDFKLFVKKSHIELIKLLKELIQTMLEHAKVHKKTIMPSFTHLQ
                     HAQPVSFSFYILAYAFMLMRDIKRLQNSLELADFSPLGSCACAGTSYRTNRELSAEIL
                     GFKDIMLNAMDGVSDRDFALDLLYDIAVIFTHTSRLCEEMILFSSSEFSFITISDSFS
                     TGSSIMPQKKNPDVCELIRGKTGRVYGNLISLLTIMKALPLAYNKDMQEDKEGIFDSV
                     KTAKDSLIILNAMLKEIQINKENMLNACKKGHLLATDLADYLVREKNIPFRKAHFIVG
                     NVVAQAEAQGIDISEIKDLSKIDPVFDEKAMELLNFEFSLNSKQSEGSSSIASIEKQI
                     QILEGFIQNL"
     gene            complement(4916..6019)
                     /gene="ychF"
                     /locus_tag="RJ266_000724"
     CDS             complement(4916..6019)
                     /gene="ychF"
                     /locus_tag="RJ266_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HDV7354494.1"
                     /translation="MSLSVGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAM
                     VEVPDLRLNELAKIVKPERIMHSLIEFVDIAGLVKGASKGEGLGNKFLSNIRETEVIL
                     HIVRCFDEENITHVEGGVDPLHDVEIINTELILADIEQLSKKIEKLTKEAKANQKGAK
                     ESLELANSLLDHLNKGLAASSYPEKESEIYQALIKELRLLSAKEVIYGANVDENGISE
                     DNDYVKALKEYAKKNDHEVIKLCAKIEEELVGLSDEESHEFLSSLGVNESGLDQIIRT
                     AFAKLGLISYFTAGVVEVRSWTIKKGWKAPKAASVIHNDFEKGFIKAEVISYEDYIQY
                     KGENGAKEAGKLRLEGKDYIVLDGDVMHFRFNV"
     gene            complement(6016..7467)
                     /locus_tag="RJ266_000725"
     CDS             complement(6016..7467)
                     /locus_tag="RJ266_000725"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HDV7354495.1"
                     /translation="MKFELNDKKLDAIKADFELVFIQDKNLKIFNKEKDFFKLNNYKG
                     EGALLDLNNKKLYLELKSLAYEDIRLSLCTAYKTLEKLNIKSVKLPSIIGDCVVRSFA
                     SLVEGVLFGAYKFDKYKSEKKTSTLEKFIISSEELNGKKFNKDEAKIGLERGEILANA
                     TNFTKNIVNEIPEIYTPLKMAEDAQNLAKENKNIICKIYDEKFLAKEKMNAFLAVNRA
                     SIHPPRLIHLSYKAKNAKKRVVFVGKGLTYDSGGLSLKPADFMLTMKADKSGAAAVMG
                     IIKAVAELALDLEVHCILGATENMIGGNAYKPDDVLISREGVSIEVRNTDAEGRLVLA
                     DCLSFAQDLKPDLLIDMATLTGACVVGLGEFTSAIMGNNEELQNDFYLSSKKSGEYTT
                     ILHFNPHLRELIKSNIADVSNTASSRYGGAITAGLFLDKFIRKEYKDKWLHLDIAGPA
                     YTEKSWGYSSFGAGGAGVRMCVNYLIQILRKAK"
     gene            complement(7464..8060)
                     /locus_tag="RJ266_000726"
     CDS             complement(7464..8060)
                     /locus_tag="RJ266_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDV7354496.1"
                     /translation="MEEFLKNLLYQYKDLAYIIIFLWCILEGELALILAGIFAHQGHV
                     NLGFVIFIAGLGGFVGDQIYFYIGRYNKRYIQKKLKTQRRKFAVAHLLLQRFGWPIIF
                     IQRYMYGFRTIIPMSIGITRYSAKKFAIINLFSAWVWASITILLAWYFGEQIWKMVTW
                     AEEHWYYAAIIIIAFLSLLLFGFKQMEKAILKDKRKKS"
     gene            complement(8079..8627)
                     /gene="apt"
                     /locus_tag="RJ266_000727"
     CDS             complement(8079..8627)
                     /gene="apt"
                     /locus_tag="RJ266_000727"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HDV7354497.1"
                     /translation="MIKLTQEEKKYLLDSIRIIPDFPKKGIIFRDITTLLNNKEALNF
                     LLRHLKERYKDYNLDFIAGTESRGFIFASMICAKLNLPFVPIRKPGKLPFETFSCEYD
                     LEYGSDKVELHKDAFKNIQNARVLLVDDLIATGGTAIASYELIQKAGAKCVEACFLMN
                     LKDLNGANKLEKLTSVYSVLEI"
     gene            complement(8624..8956)
                     /locus_tag="RJ266_000728"
     CDS             complement(8624..8956)
                     /locus_tag="RJ266_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354498.1"
                     /translation="MFTNWLVLTILICATIYLIVMLFYYKTLLNKEKTSKDFIKNNLD
                     DTEIVIRKLQIQLQRSLGNIDILTEELNKIKADLTSLRTRNSQYRLENDKLRQRIKEL
                     EAKIEALL"
     gene            complement(8956..9393)
                     /gene="rpiB"
                     /locus_tag="RJ266_000729"
     CDS             complement(8956..9393)
                     /gene="rpiB"
                     /locus_tag="RJ266_000729"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HDV7354499.1"
                     /translation="MLREKIYIASDHAGFELKEKICVFLKEKNIIFNDLGTNTCASCD
                     YPDYAHLLAEKINKRSFGILICGSGIGISIAANRHKNIRCALCHESLSAELARRHNDA
                     NVLALGGRLIGVELAIDIIEKFIQTPFEEGRHMQRIQKIEVKI"
     gene            9560..10114
                     /locus_tag="RJ266_000730"
     CDS             9560..10114
                     /locus_tag="RJ266_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HDV7354500.1"
                     /translation="MKLILIGSSTGGPNQLKFLLKDIDVKNTCVVIAQHMSASFIPSF
                     VGQFNKEAFSEVCLLNDKEILSNKIYICPKNTILSGNLNIVAAWQDVASSFKPSVDLL
                     FHSAVSLAKTNKILAIILTGMGDDGAKGLFELYKTGVRCLCENEADSVVYGMPKRAKD
                     MNPHLKPMSLKEIKKEIVNFIDQD"
     gene            10130..10918
                     /locus_tag="RJ266_000731"
     CDS             10130..10918
                     /locus_tag="RJ266_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDV7354501.1"
                     /translation="MEKKITPSELELNEFIKIINEMSGIDLTDKKNILALKLNKFLEG
                     TNTKNFSEFLGKLKSNRQLKQETLDFVTIGETYFLRELAQLKEIIYYAKSLEKRVNIL
                     SAPCSSGEEVYSLALLAAQNFIKDMYILGVDINSSVIEKAKLGKYQGRTLQRLSESEK
                     RRFFLESEDKFYTINKNELCTCKFELCNVFEEKFSRLGKFDIIASRNMIIYFDHESKL
                     KLMERFHRILNDKGRLYVGNADLIPETIYFKKIFSPRGVYYEKV"
     gene            11054..11782
                     /locus_tag="RJ266_000732"
     CDS             11054..11782
                     /locus_tag="RJ266_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDV7354502.1"
                     /translation="MIELKNVNKYYGTHHVLKNINLSVKEGEKLVIIGPSGSGKSTTI
                     RCMNGLEEVSSGEVVVNNLVLNHKNKIEICRKYCAMVFQHFNLYPHMTVLQNLTLAPM
                     KLQKKSKKEAEETAFKYLKVVGLLDKANVYPATLSGGQQQRVAIARSLCTKKPYILFD
                     EPTSALDPETIQEVLDVMKEISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEEN
                     IPSEFFSNPKTERARLFLGKILKN"
     gene            11804..12583
                     /gene="peb1A"
                     /locus_tag="RJ266_000733"
     CDS             11804..12583
                     /gene="peb1A"
                     /locus_tag="RJ266_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adhesin/ABC transporter
                     aspartate/glutamate-binding protein PEB1a"
                     /protein_id="HDV7354503.1"
                     /translation="MVFRKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGV
                     KNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSV
                     DAVIATFTITPERKRIYNFSEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTK
                     KAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFSVDKSILLGYVDDKSKILPDS
                     FEPQSYGIVTKKDDPAFAKYVDDFVKEHKNEIDALAKKWGL"
     gene            12585..13337
                     /locus_tag="RJ266_000734"
     CDS             12585..13337
                     /locus_tag="RJ266_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDV7354504.1"
                     /translation="MNESVGFVEHLRQILTSWGLYDENSISPFAVWKFLDALDNKDAF
                     INGFIYTLEVSILALLIATIFGTIGGVMATSRFKIIRAYTRIYVELFQNVPLVIQIFF
                     LFYALPVLGIRLDIFTIGVLGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQ
                     QMRYIIVPQTIRIILPPMTNQMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYAPAY
                     IFAAVLYFIICYPLAYFAKAYENKLKKAHLTR"
     gene            13348..14007
                     /locus_tag="RJ266_000735"
     CDS             13348..14007
                     /locus_tag="RJ266_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDV7354505.1"
                     /translation="MENVFNAQNIEFLMQGLFLTLKIALATCIISIVFGTFLAITKNY
                     GDKLSKFLAACYIDIFRNTPLLLWMLAACFVLPVFFGQFPQAFWGTIGFSLYTSSVMA
                     EIIRGGLNSIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAY
                     LAGLGIAELTYNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKKTAYI
                     S"
     gene            14115..15044
                     /locus_tag="RJ266_000736"
     CDS             14115..15044
                     /locus_tag="RJ266_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HDV7354506.1"
                     /translation="MRGYKIFSGSANVEFARQVSKYLSLPLSDAGVKRFSDGEISVQI
                     DESVRGKDVFIIQSTCAPTNDNLIELLILTDALRRSSANSITAIIPYFGYARQDRKAN
                     PRVPITAKLVANLIQAAGIDRVATIDLHAGQIQGFFDIPVDNLYGSIVFNDYIKAKHF
                     KNAIIGSPDIGGVARARSVAKHLGLDIVIVDKRREKANESEVMNIIGDVKDKEVILVD
                     DIIDTAGTIVKAAEALKEKGAKSVMACCTHAVLSGKAYERIASGVLDELVVTDTIPLK
                     EQLPNIKVLSVTPVFAEVIRRVYHNESVNSLFI"
     gene            15211..17322
                     /locus_tag="RJ266_000737"
     CDS             15211..17322
                     /locus_tag="RJ266_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HDV7354507.1"
                     /translation="MTQLSTKILWLFVATLGAICFGYLALQNGESVSAIYLVVAAVCI
                     YMIGYRFYGRFVAYKVLELDKNRATPALVENDGRDFVPTNKAVLFGHHFAAIAGAGPL
                     VGPILAAQMGYLPSMLWILVGGVLAGAVHDFVVLFISTRRKGRSLGEMIKDEMGKFTG
                     GVAMVAIFGIMLIIIAILAMVVVKALAESPWGLFTIAMTIPIAIFMGIYMRFIRPGRV
                     GEASIIGFVLLILAIHYGSVIAADPYWAKIFTLEAPTLAIVMMAYGFIASVLPVWFLL
                     APRDYLSTFLKIGVIVVMAVAIVLVAPDLQMPKANTQYFDGTGPVFAGGVFPFLFITI
                     ACGAISGFHALISSGTTPKMLENETHALAVGYGSMLAESAVAIMALICACILHPGLYF
                     AINSSSALIGTDVVNVAQTISSWGFSITPEEITTLTTNIGEHTILSRTGGAPTFAIGV
                     ALILHELFGGVDLMAFWYHFAILFEALFILTAVDAGTRACRFMVQDILGNVYKPLGDI
                     HNYPAGLLATALSVAGWGYFLYQGAIDPKGGIYTLWPLFGVSNQMLAGMALLLATTIL
                     VKMGKARYTWVTLVPAVFVLVTTLYGGIQKIMPYEEGNKIANAVSHVAAVSIQSQKIK
                     DLEFKLNNTKDEKEISTIKKEISIATQSKVGNLLNAILCVFFMIATLLVIISCIGICL
                     GKIKIPLKETKYIKIDEFQKI"
     gene            17303..17500
                     /gene="kcuS"
                     /locus_tag="RJ266_000738"
     CDS             17303..17500
                     /gene="kcuS"
                     /locus_tag="RJ266_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_148936501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KCU-star family selenoprotein"
                     /protein_id="HDV7354508.1"
                     /translation="MNFKKFKYYYEKAERFFHPLVGLSSYDKYLEHMKQKHPGKIPKT
                     RGEFFKECLDKKYNSGGLNKC"
     gene            complement(17540..17953)
                     /locus_tag="RJ266_000739"
     CDS             complement(17540..17953)
                     /locus_tag="RJ266_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDV7354509.1"
                     /translation="MRDMGEPKLKIVAMPSDTNPAGNIFGGWILSQIDLAGAIAAREL
                     SPERVVTISMDKVVFKEPVFIGDIISCYSKVVNVGNTSISVEVEVTAQRVDSQGCTSC
                     INVTSALVTYVSVTRDGKKKPISEELKRIHGFLNA"
     gene            18015..19847
                     /gene="ciaB"
                     /locus_tag="RJ266_000740"
     CDS             18015..19847
                     /gene="ciaB"
                     /locus_tag="RJ266_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein CiaB"
                     /protein_id="HDV7354510.1"
                     /translation="MNNFKEIAKLVRKYKERNNALYEFLDKEDVSEYFRSLISLSELK
                     QDKTTMLAILRRLVDLKEENLVQEWKKNNFKEDKIIELKHKFYEEVRKFYEKEHQNLI
                     NEIKEKKLLNNFYQSLIQGVHNIGLIMNIFEISWTKEIIEKNNKILSTQFPNLDDAME
                     FLRKNHLYQKTPEGEICERSYGVLVRIGNLWKFVPYARFFENEILKLEFAFENMIDQL
                     KIFASNEEEKAYIEYFEKLKLAFCEKDEDRVIKAWQEAEFAWMKVKSPLQVGHPLEYY
                     EDNYTHAVALEWDIRIEDENDFDVLKFGSEIKESFEHVYKNIGLEDCELEKEVLSNIE
                     KTQLYICTPMIFYGAELKGLFSAQVVPNDEFVSSKAGKKIFAFINFVYENAKTKPFMK
                     ISSEVFDKEFLDFGRNILFYQEKIWKRVYEVSTIGHEFGHIFFIANDTEKTMNQSGFF
                     KNIEEYKATTGGLINFFYHEQDDLIMPVFHELIKRAIGLISWQRVDEVRPYYTEGLIH
                     LSLLFESEVLIFENNNLKINFDLGHYEKFKELTLKNYHELAKHYALRLDAKEFLSRFC
                     EIEDNIFLPIMPKCKEFVKFYYDLYEKIGNEIDNSGEFERYKKK"
     gene            19949..20245
                     /locus_tag="RJ266_000741"
     CDS             19949..20245
                     /locus_tag="RJ266_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HDV7354511.1"
                     /translation="MTKADFISLVAQTAGLTKKDATTATDAVISTITDVLAKGDSISF
                     IGFGTFSTQERAAREARVPSTGKIIKVPATRVAKFKVGKNLKEAVAKASGKKKK"
     gene            20372..21271
                     /gene="cysM"
                     /locus_tag="RJ266_000742"
     CDS             20372..21271
                     /gene="cysM"
                     /locus_tag="RJ266_000742"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase B"
                     /protein_id="HDV7354512.1"
                     /translation="MKVHEKVSELIGNTPIIHLKKFGINVFAKCEFLNPSHSIKDRAA
                     FEMIKDALDSKKINQDTTIVEATSGNTGISLAMICADLGLKFIAVMPESMSLERRKMI
                     TLFGARLELTPANLGMKGAVDKANEILLNTPNSFMVSQFENISNKNAHRKNTALEILR
                     DLDNELDIFVAGFGTGGTISGVGEILKEKLEKVRIVGVEPLNSPLLSKGEAGSHKIQG
                     IGANFIPAILNKEVIDEVITVSNEDAINTAKELAKSGLMVGISSGANVFAASMLAKKF
                     PDKRILTMLNDTAERYLSTDLFA"
     gene            complement(21278..21838)
                     /locus_tag="RJ266_000743"
     CDS             complement(21278..21838)
                     /locus_tag="RJ266_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HDV7354513.1"
                     /translation="MKKNIILFIVIVAIILGVIFFIKNHQNSYDFILKSDLKEETTLK
                     DFKGDKLIIYFGYTYCPDVCPATLSLVGKALKQINNPKAHLLFISLDPNRDNNLSNTN
                     EWLRYFYPKADALIAKDEKTLQKITKQYNVQYQKIDLNDSFMGYSIAHSNMLYLIDEK
                     GHFYKEISDLNPQEILRELRIFLNSQ"
     gene            complement(21835..22287)
                     /locus_tag="RJ266_000744"
     CDS             complement(21835..22287)
                     /locus_tag="RJ266_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354514.1"
                     /translation="MRKIIFILAFAFVIAILYIIFDFYVIKDSQKITKTDFSTPLTCD
                     LNVKDCTYSFNNKKVLISLNPKPLQSLDVTNLKIVNLGNYNNLGIKIYGLNMYMGEIK
                     PKIHRLNSTDYESKIVLAACVLDTMRFRVEFMDNNKPIGFYFDFELKK"
     gene            complement(22291..22710)
                     /locus_tag="RJ266_000745"
     CDS             complement(22291..22710)
                     /locus_tag="RJ266_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HDV7354515.1"
                     /translation="MKKILLLGALFAVNLWAVNDIEVKNAFVKQTPPHAQNSAIFLTI
                     FNNTNKDIALISAKSDISEVSELHTHIHKDGKMMMQKIPEIIIKAHSSTELKSGGYHI
                     MLLKLKKPIIKDTKVNLDLKFNNHKTIELKNIDSKEF"
BASE COUNT         7785 a         3024 c         3975 g         7957 t
ORIGIN      
        1 attttcttaa tttggttgtt ttttattcgt tttatatcgc ctatagcaat aattttggta
       61 atgtgttatc aaatttttgt ataataatga aaaaatattt ttttaaggaa aaataatggc
      121 taaaaaattc atcgatgtaa tggatacaag ctttagggac ggttttcagt ctgtttatgg
      181 agctagggtt ttaatggatg atttttttcc tgcagtagaa gcagcaaaag aagcgggtat
      241 tactcatttt gaatttggtg gtggtgctag atttcaaagc ttgtattttt atcttaatga
      301 agatgctttt accatgatgg atagatttag ggctattgtg ggaaaagatg ctaatcttca
      361 aactttagca agaggggtta atactgttac tttagatact ggaagtagtg agcttattga
      421 tttgcatgca aaactttttg caaaacacgg taccacaacg ataagaaatt ttgatgctct
      481 taatgatata aataatttaa aatttagtgg tgaatgtata gcaaaacatg gattaaaaca
      541 tgaaatcgct attaccttaa tggatctacc gccaaattgc aaaggtgctc atgatgtgcc
      601 tttttatgaa aaaattttga aagaaatttt agcagcagaa attccttttc acagcatttg
      661 ttttaaagat gcaagtggaa cttcaaatcc aaataaaatt tatgaaacca ttaaaatggc
      721 aagaaaaatt ttacctcaag atatgcatat tagacttcat acgcatgaaa ctgcaggggt
      781 gagtatagcc tgctatcttg cagcacttga agcaggtgtt gatggtatcg atttggctgc
      841 agctcctgta agtggtggaa cttctcagcc tgatatttta accatgatgc atgccttaaa
      901 aggtaaagat tatgatttag gtggacttga agaagaaaaa attctaaaat acgaagaagt
      961 tttaaaagat tgtttaaaag agtatttttt accccctgaa gctactatag taaatccact
     1021 tattcctttt tctcctatgc caggaggagc tttaacggca aatacacaaa tgatgaggga
     1081 taataatatt ttagataaat ttccacaggt cattcatgct atgagagaag ttgtagaaaa
     1141 aggtggattt ggtacttcgg ttactccagt ttctcaattt tattttcaac aagcatttaa
     1201 taatgttatg tttgggtctt ggaaaaaaat cgcagaaggt tatggaaaaa tggtgcttgg
     1261 ttattttgga aaaactccag ttgcacccga tgcaaacatt attgagcttg cttcaaaaca
     1321 acttaattta gaacctacta cagagcttgc tataaatata gctgataaag atgagagtaa
     1381 aagtatagct tataccaaaa ccttgcttga aaaagagggt atagaaacga gtgaagaaaa
     1441 tatatttgtt gcagcagctt gcaaagaaaa aggtatagca tttttaaaag gagaggcaaa
     1501 ggtaaatata cgcaaattag ccagtatgcc aaaacctatg agtgcagatg aaaacaaatt
     1561 taccgtagct gtaaatggta ataaatatca tgtagaagta agctatggct ttgataaaga
     1621 tgttaatgtt aaaagtgtga aaaaagtaga agaaaataaa aatattattt cttcaaattc
     1681 aacaagttct gtagatgctg aaaatgaagt tttagcaggt atttcaggta atgtctttaa
     1741 aatttatgtt aacgaaggcg aagaagtaaa atcaggtcaa gctatcatgg ttttagaagc
     1801 aatgaagatg gagattgagg ttaatgcccc aaaagatgga attattttag agctttgtat
     1861 taaaataggt gatactgtta atgaaggcga agtattagct atttacaaga attaaagtga
     1921 gggaaaaatg aaaaaatttg ataagttagg tttggataat ataaaggaaa tttttcataa
     1981 tttaagttat gatgaattaa atgctcatga aaaagcaaat aatgaaggtt taagcacgga
     2041 taatgatact ttttgtgtag atacagggat ttttacaggt agaagtccta aagataaata
     2101 ttttgtaaaa caagatccat ctagtaaata tatagcttgg ggaaaggtaa atcagcctat
     2161 tacaaaagaa ttatttgata aacttttaac taaagcaaag caagaattaa gcggaaagaa
     2221 aatttatgtt caagatgttt tttgcggtgc ttctttgcaa agtcgcaaag cagtaagatt
     2281 tgttactgaa attgcatggc aagcgcattt tgttaaaaat atgtttattc gcccaagtca
     2341 agaggaactt gagaatttta aagcagattt tattgtttat aatgcttgca aatgcatcaa
     2401 tgaagattac aaacaagata gtttaaattc agaggttttt gtgatcttta atgttgaaga
     2461 aaatatagcg gttattggtg gaacttggta tggtggagaa atgaaaaaag gtattttttc
     2521 tatgatgaat tattggttac cactagaaaa taaactttct atgcattgta gtgcaaatgt
     2581 cggagaaaaa gacgatgtgg cacttttctt tggacttagc ggtacaggaa aaactacgct
     2641 ttcaaccgat ccaaaaagaa gactcatagg tgatgatgag catggctggg atgatgaagg
     2701 tgtgtttaat tttgagggcg gttgctatgc aaaaacaatc aatcttgatc ctgaacatga
     2761 gcctgaaatt tatggagcca ttaaaagaaa tgcactttta gaaaatgtag ttttaagagc
     2821 tgataagagt gttgattatg ctgatgcctc aaaaacagaa aacacgagag tttcttatcc
     2881 tatagagcat attgaaaatc atgagcctag tctaaaagca gggcatccaa aaaatattat
     2941 atttttaagt gcagatgctt ttggaatttt acccccggta agcaaactaa gcaaagagca
     3001 ggctatgtat tattttttaa gtggctatac agcaaaagta gctggaactg agcgcggtat
     3061 aacagagcct caagcaactt tttcagcttg ttttggagaa ccttttatgc ctttgcatcc
     3121 aacggtttat gcgagattgc ttggtgaaaa gattgaaaaa catgaagtta atgtttatct
     3181 tgttaatacg ggttggagtg gcggaagcta cggtgtgggt aaaagaatga gcattaaggc
     3241 tactagggct tgcattaatg ctattctaga tggaagtatt acaaaatgcg aatttgaaaa
     3301 ttttgaagtg tttgatttag ctattccaaa agctttagaa ggtgtagaaa gtgtactttt
     3361 aaatcctata aatacttggt tagataaaaa tgcttatatt gcaacaagag ataaattagc
     3421 acatatgttt atacaaaatt ttaaacgtta tgaagatgtc aaagaaggca ttgaatttag
     3481 caaatttgga ccaaaaattt aaggcattta aatgaaaaat gaaatgtggt caggacgttt
     3541 tagtgatgca agtgatgagc ttttaaaaga atttaatgca agtttaaatg tagataaaac
     3601 tttgttcaat gaagatatac aaggttctat agcacacgct acaatgcttg aaagttgtgg
     3661 tattttaaaa aaagaagaat tagatgctat tataaaaggt ttagagcagg ttagaagtga
     3721 aatagagcaa ggtaaattta tttttgatat taaagatgaa gatattcata tggccgtaga
     3781 aaagcgttta agcgagatta taggtagtga aattggtgga agacttcata ctgcaagaag
     3841 tagaaatgat caagtggcta ctgattttaa actttttgtc aaaaaatctc atattgaact
     3901 tataaagctt ttaaaagaat tgattcaaac catgctcgaa catgctaaag tgcataaaaa
     3961 aactattatg ccaagtttta cacatttaca gcacgctcag cctgtgagtt tttcttttta
     4021 tattttagct tatgctttta tgttaatgcg agatattaag cgtttgcaaa atagcctaga
     4081 actcgcagac ttttcgccac ttggatcttg tgcatgtgca ggaacaagct atagaaccaa
     4141 tcgtgagttg agtgctgaaa ttttaggatt taaagatatt atgctaaatg ctatggatgg
     4201 agtgagtgat agggattttg ctcttgattt gctttatgat atagcagtta tttttacgca
     4261 cacatcaaga ctttgcgaag aaatgatctt attttcaagt tcggagtttt cttttataac
     4321 tataagtgat agcttttcaa caggaagttc tattatgcct cagaaaaaaa atcctgatgt
     4381 ttgtgagctt atacgtggaa aaacagggcg tgtttatgga aatttgattt ctcttttaac
     4441 tataatgaaa gctttacctt tagcctataa taaagatatg caagaagata aagaagggat
     4501 ttttgatagt gtaaaaaccg ctaaagatag cttaatcatc ttaaatgcaa tgctaaaaga
     4561 aatacaaatt aataaagaaa atatgcttaa tgcttgtaaa aaaggtcatt tattggctac
     4621 cgatttggca gattatttgg tgcgtgaaaa aaatattcct tttagaaaag cacattttat
     4681 agtgggaaat gttgttgcac aagctgaagc acaaggtatt gatataagtg aaattaaaga
     4741 tctttcaaaa atagatcctg tatttgatga aaaagctatg gaacttttaa attttgaatt
     4801 ttctttaaat tctaagcaaa gtgaaggctc aagttctatt gcaagcatag aaaagcaaat
     4861 tcaaattttg gaaggtttta ttcaaaattt ataaatattg tttaggctat tttgcctaaa
     4921 cattgaatct aaagtgcatt acatcgccgt ctaaaacgat atagtctttt ccttcaaggc
     4981 gtagctttcc tgcttctttg gcgccatttt cgcctttgta ttggatatag tcttcatagg
     5041 aaataacttc agcttttata aagccttttt caaagtcatt atgaatcacg cttgctgctt
     5101 ttggtgcttt ccagcctttt ttgattgtcc aagaacgcac ttcaactaca ccagcggtaa
     5161 aataactgat cagtccaagc ttagcaaaag cagtgcgtat gatttgatca agaccgcttt
     5221 cgttaactcc tagagagctt aaaaattcat gactttcttc atcgcttaat cctactaatt
     5281 cttcttcgat ttttgcacaa agcttgataa cttcatgatc atttttttta gcatattctt
     5341 ttaaagcttt tacataatca ttatcttcac taataccatt ttcatcaaca tttgcaccat
     5401 aaatcacctc tttagcagaa agcagtctta attccttgat tagggcttga taaatttcac
     5461 tttccttttc aggataagaa cttgcagcta agcctttgtt taaatgatca agtaaggaat
     5521 ttgcaagttc gagactttct ttggcaccct tttgattggc tttggcttct ttggtgagtt
     5581 tttctatttt tttactcagt tgctcaatat ctgctaaaat aagctctgta ttgataattt
     5641 ctacatcatg taaaggatca actccacctt caacatgggt aatattttct tcatcaaaac
     5701 aacgtactat atgcaaaata acctcagttt cacgtatatt tgaaagaaat ttatttccca
     5761 agccttcgcc tttacttgcg cctttaacaa gtccagcgat atctacaaat tctattaaag
     5821 aatgcataat tctttcaggt tttactattt tagcaagttc attaagtctt aaatcaggaa
     5881 cttcaaccat ggctttatta ggctctatgg tgcagaaagg atagtttgca ctttgggcat
     5941 tttgtgcttt agttaaagca ttaaaagttg ttgatttgcc aacatttgga agtcctacta
     6001 tacctacgct taaactcatt tagctttcct taaaatttga attaaataat taacacacat
     6061 tctaactcca gctccacctg cgccaaaact agaatatccc caagattttt ctgtataagc
     6121 aggtcctgct atgtcaagat gtagccattt atctttatat tctttacgaa taaatttatc
     6181 taaaaataac cctgcggtaa ttgcacctcc gtagcgacta gaggcagtat tactaacatc
     6241 ggcaatattt gattttataa gttctcttaa gtgagggttg aaatgtaaga ttgtggtata
     6301 ttctccgctt tttttagagc ttagataaaa atcattttgc aattcctcat tatttcccat
     6361 aatagcactt gtaaattctc caagtcctac aacacaagct ccagtaagag ttgccatatc
     6421 gataagtaaa tcaggtttta aatcctgtgc aaaagaaaga caatcagcta aaaccaagcg
     6481 tccttctgca tctgtatttc ttacctctat gcttacacct tcacgactga ttaacacatc
     6541 atcaggctta taagcattgc cgcctatcat attttcagtt gcgcccaaaa tgcaatgcac
     6601 ttctaaatct aaagcaagtt cagctacggc ttttatgatt cccattactg ctgctgcacc
     6661 gcttttatca gctttcattg taagcataaa atcagctggt tttaagctta atccaccgct
     6721 atcgtaagtt aagccttttc caacaaatac aacacgtttt tttgcatttt tggctttata
     6781 gcttagatga atgaggcgtg gtgggtgtat cgaggcgcga tttaccgcta aaaaggcatt
     6841 cattttttct ttggctaaga atttttcatc ataaatttta caaataatgt ttttattttc
     6901 tttagctaaa ttttgcgcat cttctgccat ttttaaaggg gtgtaaattt caggaatttc
     6961 attgactata tttttagtaa aatttgtagc attagctaaa atttctccac gctctaaacc
     7021 tatcttagct tcatctttat taaatttctt accatttaat tcttcgcttg aaataataaa
     7081 tttttccaaa gtacttgttt ttttctcgct tttatatttg tcaaatttat aagctccaaa
     7141 aagtacgcct tcaactaaag atgcaaaact tctaactaca caatctccta ttatgctagg
     7201 aagttttacg cttttaatat taagtttctc aagagtttta tatgctgtgc aaagacttaa
     7261 tcttatatcc tcataagcaa gacttttaag ctctaaataa agctttttat tgtttaagtc
     7321 taataatgca ccttcgcctt tgtaattatt aagtttaaaa aaatcttttt ctttgttaaa
     7381 aatttttaaa tttttatcct gtataaaaac aagttcaaag tctgctttta tagcatctag
     7441 ttttttatcg tttaattcaa atttcatgat tttttccttt tatctttaag tatagctttt
     7501 tccatttgtt taaaaccaaa taataaaagg gataaaaaag ctataataat aatggctgca
     7561 taataccaat gttcttcagc ccaagtcacc atcttccaaa tttgttctcc aaaataccaa
     7621 gctaaaagta tagtgattga tgcccaaacc caagcactaa aaagattgat aatagcaaat
     7681 ttttttgcac tataacgcgt gattcctata ctcataggta taatggttct aaagccatac
     7741 atatagcgtt gtataaaaat gataggccaa ccaaaacgtt gtaaaagtag gtgtgctact
     7801 gcaaatttac gcctttgagt ttttaatttt ttttgtatgt agcgtttatt atatcttcct
     7861 atatagaaat aaatttgatc gcctacaaaa ccaccaagtc ctgctataaa tataacaaaa
     7921 cctaaattta catgtccttg atgagcaaaa atacctgcta aaattaaagc taactctcct
     7981 tctaaaatgc accataaaaa aataataata taagctagat ctttgtattg gtaaagtaaa
     8041 ttttttaaaa attcttccat ttgtaccttt ctatagtttt aaatttccaa aacactataa
     8101 actgaagtaa gtttttcaag tttatttgct ccatttaaat ctttaagatt cattaaaaaa
     8161 caagcttcaa cacatttagc tccagctttt tgaatgagtt catatgaagc tatagctgtt
     8221 ccgccagttg ctattaaatc atctacaagt aaaactcttg cattttgaat atttttaaat
     8281 gcatctttat gaagttctac tttatcgctg ccatattcaa gatcgtattc gcagctaaag
     8341 gtttcaaaag ggagttttcc aggttttcta ataggcacaa aaggaagatt aagttttgca
     8401 caaatcatag atgcaaagat aaatcctctg ctttctgttc ctgctatgaa gtctagattg
     8461 taatctttgt agcgttcttt taaatgtcta agtagaaaat ttaaagcttc tttgttattt
     8521 agtagagtgg tgatatctct aaaaataatt cctttttttg gaaaatcagg aataatccta
     8581 atgctatcaa gcagatattt tttttcttct tgtgttagtt ttatcataat aatgcctcga
     8641 tttttgcttc taattcttta attctttgtc ttagtttgtc attttccaag cgatattgag
     8701 aatttctggt tcttaaagat gtaaggtctg ctttgatttt attaagctct tctgtgagta
     8761 tatctatatt tccaagactt ctttgaagtt gaatttgtag ttttctaatg acaatctcag
     8821 tatcatcaag attgtttttg ataaaatctt ttgatgtttt ttctttatta agtagagttt
     8881 tatagtaaaa caacattaca ataagataga tagttgcaca aatcaatata gttaaaacaa
     8941 gccagtttgt aaacattata tttttacctc aattttttga attctttgca tatgtctccc
     9001 ttcttcaaaa ggagtttgaa tgaatttttc tataatatct atagctaatt caaccccaat
     9061 taatcttccg cctaatgcca aaacattggc gtcattatgc cttcttgcaa gttctgcact
     9121 taagctttcg tggcataatg cacaacgaat gtttttatga cgatttgctg caatagaaat
     9181 tccaattcca cttccacaaa taagaatgcc aaagctccgt ttgtttattt tttcggcaag
     9241 taaatgcgca taatcaggat aatcgcagct tgcgcaagtg tttgttccta aatcgttaaa
     9301 aattatattt ttttctttta aaaatacgca aattttttct tttaattcaa aaccagcatg
     9361 atcactagca atataaattt tttccctaag cattggtttc ctaaattact atataaaata
     9421 agataaaaac ctaatcttat catattaaat cataaaaaca gcttttcttt gttttaaaaa
     9481 taagctttat ttttctttat atatgttaga atcatgtgac aagaaaaata aaatttcaat
     9541 aaattaagag gagaagaaag tgaagctcat actcatagga tcttcaacag gtggtcctaa
     9601 tcagcttaaa tttcttttaa aggatattga tgtaaaaaat acttgtgtag ttatagctca
     9661 gcacatgagt gccagtttta ttccatcttt tgtggggcaa tttaataaag aagcttttag
     9721 tgaagtgtgc ttattgaacg ataaagagat attaagcaat aaaatttata tttgccctaa
     9781 aaatactatt ttatctggaa atttaaatat tgtagccgct tggcaagatg tggcttcaag
     9841 ctttaaaccg agtgtggatt tactttttca ttccgctgtt tctttggcaa aaacaaataa
     9901 aatacttgct attattttaa cgggcatggg agatgatggc gcaaaaggtt tatttgagct
     9961 ttataaaaca ggagttagat gtttatgtga gaatgaagca gatagcgtcg tttatggtat
    10021 gccaaaaaga gcaaaagata tgaatccgca tttaaaacct atgagcttaa aagaaattaa
    10081 aaaagaaatt gtaaatttta ttgatcagga ttaataaaag gaaaattgca tggaaaaaaa
    10141 aataactcct agcgaattgg aacttaatga atttataaaa attatcaacg aaatgagtgg
    10201 tattgattta accgataaaa aaaatatact agctttaaag ttgaataaat ttcttgaagg
    10261 aactaatact aaaaattttt ccgaattttt gggaaaatta aaaagcaata gacaacttaa
    10321 acaagaaact ttagattttg taaccatagg tgaaacttat tttttaagag aattggctca
    10381 attgaaagaa ataatttatt atgccaaaag cttagaaaag agagtaaata tcctaagcgc
    10441 cccttgttca agtggagaag aagtatattc tttggcatta ttggctgcac agaattttat
    10501 taaagatatg tatattttag gcgttgatat taattcaagt gtgattgaaa aagcaaaact
    10561 tggaaaatat caaggaagaa ctttacagcg attgagcgag agtgaaaaaa gaaggttttt
    10621 tttagaaagc gaagataaat tttatactat taataaaaat gagctttgta cttgtaaatt
    10681 tgaactttgc aatgtttttg aagaaaaatt ttcaagattg ggaaaatttg atattatagc
    10741 ttctagaaat atgattattt attttgatca tgaatcaaaa ctaaaactta tggagagatt
    10801 tcatagaatt ttaaatgata aaggaaggct ttatgttggc aatgctgatt taattccaga
    10861 gactatttat tttaaaaaga ttttctctcc aagaggtgtt tactatgaaa aagtataaat
    10921 tctaaaaatt actaaaagtt acactttgga aatttattag taaaaataag ttacattttg
    10981 aagtagtttt ctttatttaa tgataaaata atttcaatta attttatatt tagctaaaaa
    11041 taaaggaaaa aacttgattg aattaaaaaa tgtaaacaaa tactacggaa ctcatcatgt
    11101 tctaaagaat attaatcttt ctgttaaaga aggtgagaag cttgttatta taggtccaag
    11161 tggaagtgga aaaagtacaa ctatccgttg catgaatggg cttgaagaag ttagttcagg
    11221 agaggtcgta gttaacaatc ttgttttaaa tcataaaaat aaaattgaaa tttgccgaaa
    11281 atattgtgca atggtttttc agcattttaa tttatatcca catatgacgg ttttgcaaaa
    11341 tttgacctta gctccaatga aacttcaaaa aaaatctaaa aaagaagctg aagaaacagc
    11401 ttttaagtat ttaaaagttg taggtttgct ggataaagca aatgtttatc cagcaaccct
    11461 ttcaggcgga caacaacaac gcgttgctat agcaagatca ctttgtacta aaaaacccta
    11521 tattttattt gatgaaccta cttcagccct tgatccagaa accatacaag aggttttaga
    11581 tgtaatgaaa gaaatttcac atcaaagcaa tactaccatg gtggttgtta cacacgaaat
    11641 gggttttgca aaagaagtag cagataggat tatttttatg gaagatggtg ctattgtgga
    11701 agaaaatatt cctagtgaat ttttctcaaa tccaaaaact gaaagagcgc gactcttttt
    11761 agggaaaatt cttaaaaatt aaccaaaatt gaaaggagaa aaaatggttt ttagaaaatc
    11821 tttgttaaag ttggcagttt ttgctctagg tgcttgtgtt gcatttagca atgctaatgc
    11881 agcagaaggt aaacttgagt ctattaaatc taaaggacaa ttaatagttg gtgttaaaaa
    11941 tgatgttccg cattatgctt tacttgatca agcaacaggt gaaattaaag gtttcgaagt
    12001 agatgttgcc aaattgctag ctaaaagtat attgggtgat gataaaaaaa taaaactagt
    12061 tgcagttaat gctaaaacaa gaggcccttt gcttgataat ggtagtgtag atgcagtgat
    12121 agcaactttt actattactc cagagagaaa aagaatttat aatttctcag agccttatta
    12181 tcaagatgct atagggcttt tagtcttaaa agaaaaaaat tataaatctt tagctgatat
    12241 gaaaggtgca aatattggag tggctcaagc tgcaactaca aaaaaagcta taggtgaagc
    12301 tgctaaaaaa attggcattg atgttaaatt tagtgaattt cctgattatc caagtataaa
    12361 agctgcttta gatgctaaaa gagttgatgc gttttctgta gacaaatcaa tattgttagg
    12421 ctatgtggat gataaaagta aaattttgcc agatagtttt gaaccacaaa gttatggtat
    12481 tgtaaccaaa aaagatgatc cagcttttgc aaaatatgtt gatgattttg taaaagaaca
    12541 taaaaatgaa attgatgctt tagcgaaaaa atggggttta taatatgaat gaaagtgtag
    12601 gttttgttga acatttaaga caaattctta cttcttgggg tttatatgat gaaaatagta
    12661 taagcccttt tgcggtatgg aaatttttag atgctttgga taataaagat gcttttatta
    12721 atggttttat ttatacttta gaagtaagca ttcttgcttt gcttatagct acaatttttg
    12781 gaactatagg cggagttatg gctacaagta gatttaaaat tatcagagcc tacactagaa
    12841 tttacgtaga gctttttcaa aatgttcctt tggtaataca aattttcttt ttgttttatg
    12901 ccttgcctgt tttaggtata agacttgata tatttactat tggtgtattg ggtgttggag
    12961 cttatcacgg agcttatgta agcgaggtgg ttagaagtgg aattttggct gtgccaagag
    13021 gtcagtttga agcttctgct tctcaagggt ttacttatat tcaacaaatg cgttatatta
    13081 tagtacctca aaccattaga attattttac caccgatgac aaatcaaatg gtaaatttaa
    13141 tcaaaaatac ctctgtattg cttattgtag gtggagctga gttaatgcat tctgctgata
    13201 gctatgcagc tgattatgga aattatgcgc cagcttatat atttgcagcg gttttatatt
    13261 ttataatttg ttatcctttg gcttattttg caaaggctta tgaaaataaa ttaaaaaaag
    13321 cacatttaac gagataaagg gttgttaatg gaaaatgttt ttaatgcaca aaatattgaa
    13381 tttttaatgc aaggtttatt tctgacatta aaaatagcct tagcaacttg tattatttcg
    13441 attgtttttg gaactttttt agctataact aaaaattatg gggataaatt aagtaaattt
    13501 ttagcagctt gctatataga tatttttaga aatactcctt tattattatg gatgcttgca
    13561 gcttgttttg ttctacctgt attttttgga caatttcctc aagctttttg gggtactata
    13621 ggattttcac tttatacgag ttcggttatg gctgaaatta ttagaggtgg attaaattct
    13681 ataccaaaag gtcagtttga agcagcttat tctcaaggtt ttggtaaatt ttttactctt
    13741 ttttatatta ttttaccaca aacttttaga aaaataatac ctgctttatt atctcaaatt
    13801 gtaaccactg taaaggatac agcttattta gcgggtttag gtatagctga acttacttat
    13861 aattcaaaaa ctatattggc aaaactaaca agttttgaag aaattttagc gatgataggt
    13921 gttgttgcgg gaatttattt tataatatgt ttttcgcttt ctatgttggt aagatattat
    13981 gccaaaaaga cagcttacat ttcttaaaaa agcttatatt tttatataag ctttttaaat
    14041 ttacagcagt ttttaacatt ttttttatta aaatcttttg tattaattca taattttatt
    14101 gattaaggtt ttttatgcga ggttataaaa ttttttcagg ctcagctaat gtcgaatttg
    14161 caagacaagt ttctaaatat ctctccctgc ctttaagtga tgctggagta aagcggttta
    14221 gtgatggaga gattagcgtt caaattgatg agagtgtacg cggaaaggat gtttttatta
    14281 ttcaaagtac ttgcgctcct acaaacgata atttaataga acttttaatt cttacagatg
    14341 ctttgcgccg ctcaagtgca aattcaatta cggctattat cccatatttt ggctatgcga
    14401 gacaagatag aaaagcaaat cctagagtgc caattactgc taaacttgtg gctaatttga
    14461 ttcaagcagc tgggattgat cgcgtagcta cgatagattt gcatgcagga caaattcagg
    14521 gtttttttga tattccagta gataatcttt atggaagtat agtttttaat gattacatta
    14581 aagccaaaca ttttaaaaat gctattatag gaagtccaga tatagggggt gttgcaagag
    14641 ctaggagtgt tgcaaagcat ttaggacttg atatagttat agttgataag cgtcgtgaaa
    14701 aagccaatga aagtgaagta atgaatatta ttggagatgt aaaagataaa gaagttatct
    14761 tagtggatga tattattgat actgctggca ctatagttaa agccgcggaa gctttaaaag
    14821 aaaaaggtgc aaaatctgtt atggcttgct gtactcatgc agttttaagt ggaaaagcct
    14881 atgagagaat agcaagtgga gttttagatg agcttgtggt aacagatact atacctttaa
    14941 aagagcaatt accaaatatt aaagtattaa gcgttacacc tgtttttgct gaagtaatac
    15001 gtcgtgttta tcataacgaa agtgtaaatt ctctcttcat ttagattaaa aaagcttaaa
    15061 gattattttt aagcttttca tttttatgct acttaaagaa acaaaaaaca tatatttttt
    15121 taaaaatgtg aaaaaactaa acatctttct atacaattta atctataaat ctgctattct
    15181 ttgaaaatat tttattttct taggagaaat atgactcagt taagtactaa aattttatgg
    15241 ttgtttgttg caactttagg cgctatttgt tttggttatt tagctttaca aaatggcgaa
    15301 agtgtatcag cgatttattt ggtggttgct gctgtatgta tttatatgat aggatataga
    15361 ttttatgggc gttttgtagc ttataaggtt ttagaacttg ataaaaatcg tgcaacacca
    15421 gcacttgtgg aaaatgatgg gcgtgatttt gtgcctacaa ataaagctgt attatttgga
    15481 catcattttg ctgctattgc aggagcaggt ccattagtag gacctatctt ggccgctcaa
    15541 atgggatatt tgccttctat gctttggatt ttagtaggag gagttttagc gggtgctgtg
    15601 catgattttg ttgttctttt tatatctact cgtagaaaag gtagaagtct tggcgagatg
    15661 attaaggatg agatgggtaa atttacaggt ggagttgcta tggtggcgat ttttggcatt
    15721 atgcttatta ttattgccat tttagctatg gtggttgtaa aagctttagc agaatctcca
    15781 tggggtttat ttactatcgc aatgactatt cctatagcaa tatttatggg catttatatg
    15841 cgttttatcc gtccaggtag agtaggggag gcttctataa taggttttgt gcttttaatt
    15901 ttggctattc attatggtag cgttatagcc gctgatcctt attgggctaa aatatttact
    15961 ttagaagctc caactttggc aattgttatg atggcttatg gttttattgc ttctgtttta
    16021 cctgtgtggt ttttacttgc tccaagagat tatctttcaa cttttttgaa aatcggtgtt
    16081 attgtggtaa tggctgtagc tattgttttg gttgctcctg atttacaaat gccaaaagca
    16141 aatactcagt attttgatgg aacaggtcca gtatttgcag gtggagtgtt tccattttta
    16201 tttattacca ttgcttgtgg tgcgatcagt ggttttcatg ctttgatttc tagtggaact
    16261 actcctaaaa tgcttgaaaa cgaaactcat gctttggctg ttggatatgg ctctatgctt
    16321 gctgagagtg ctgtggcgat tatggcttta atttgtgctt gtattttaca tccaggtctt
    16381 tattttgcta taaattcaag ctctgctttg ataggaacag atgttgtaaa tgtagcacaa
    16441 actatttcaa gttggggatt tagtattact cctgaagaaa ttactacttt aaccacaaat
    16501 ataggagagc atactatact ttcaagaaca gggggagccc cgacttttgc tataggtgta
    16561 gctttgatct tgcatgaact ttttggcggc gtggatttga tggctttttg gtatcatttt
    16621 gctatattgt ttgaagcttt atttatttta acagcggtgg atgctgggac aagggcttgt
    16681 cgttttatgg tgcaggatat attgggtaat gtttataaac ctttaggaga tattcataat
    16741 tatccagctg gacttttggc tacggcttta agtgttgcag gttggggata ttttctttat
    16801 caaggcgcca ttgatcctaa gggaggaatt tatacacttt ggcctctttt tggcgtgagc
    16861 aatcaaatgc ttgcgggtat ggctttgctt cttgctacaa ctatacttgt aaaaatgggc
    16921 aaggcaagat atacttgggt tactttagta cctgcggtat ttgtcttagt gacaactctg
    16981 tatggaggaa ttcaaaaaat tatgccttat gaagaaggca ataaaatagc aaatgcggta
    17041 agtcatgtag ccgccgttag catacaaagt caaaaaatta aagatttaga atttaaatta
    17101 aataatacta aagatgaaaa agaaatttct acaattaaaa aagaaatttc aatagccact
    17161 caaagtaaag ttggaaattt gcttaatgca attctttgtg tgttctttat gatagctacc
    17221 ttacttgtta taatttcttg tataggaatt tgtttaggta aaattaaaat tcctcttaaa
    17281 gaaactaagt atattaagat tgatgaattt caaaaaattt aagtattatt atgaaaaagc
    17341 cgaaaggttt tttcatccct tggtgggact ttctagttat gataagtatt tagaacacat
    17401 gaaacaaaaa catccaggaa aaattccaaa aaccagaggg gaatttttca aagaatgtct
    17461 agataaaaaa tacaatagcg gcggtttaaa taaatgctga taagcttaaa ggataaagtt
    17521 ttatcataca aaataagctt taagcattta aaaagccatg aattctttta agttcttcac
    17581 taataggctt tttctttcca tctcttgtaa cacttacata ggttactaaa gccgaagtta
    17641 cattaatgca agaagtacaa ccttgagaat ccactctttg agctgtgact tctacttcaa
    17701 cgctgattga agtattgccc acatttacaa ccttagaata acaagaaatt atatcgccta
    17761 taaaaacagg ttctttaaaa actactttat ccatagagat ggttacaacg cgttcaggag
    17821 aaagttctct tgctgcgata gctcctgcta aatcgatttg tgaaagtatc catccgccaa
    17881 aaatatttcc cgctggattt gtatcgctcg gcatagctac aatttttaat tttggttctc
    17941 ccatatctct catttttact ccttatttta aaaaatgaat tataattaaa aaagttaaaa
    18001 aggagaataa aagtatgaat aattttaaag aaatagctaa attggttaga aagtataaag
    18061 aaagaaataa tgcgttatat gagtttttag acaaagaaga tgtgagcgag tattttagat
    18121 ctttgatttc tttaagtgaa ttaaaacaag ataaaacaac tatgctagcc atacttaggc
    18181 gtttggttga tttaaaggaa gaaaatttag ttcaagagtg gaaaaaaaac aactttaagg
    18241 aagataagat tatagagcta aaacataagt tctatgaaga ggttagaaag ttttatgaaa
    18301 aagaacatca aaatttaatt aatgaaataa aagagaaaaa acttttaaat aatttttatc
    18361 agtctttaat acaaggagtg cataatatag gtttaattat gaatattttt gaaatttctt
    18421 ggactaaaga aattatagaa aaaaataata aaattttatc tactcaattt ccaaatttag
    18481 atgatgcaat ggaattttta cgtaaaaatc atttatatca aaaaactcca gaaggagaaa
    18541 tttgtgagcg aagctatggt gttttagtta gaataggaaa tttatggaaa tttgttcctt
    18601 atgcgagatt tttcgagaat gaaattttaa aattagaatt tgcttttgaa aatatgattg
    18661 atcagcttaa aatatttgct agcaacgaag aggaaaaagc ttatatagaa tattttgaaa
    18721 aattaaaatt agcgttttgt gaaaaagatg aagatagagt tataaaagct tggcaagaag
    18781 ctgaatttgc ttggatgaaa gtaaaatcac ctttacaagt gggacatcct ttagaatatt
    18841 atgaagataa ttatactcat gcggtggcat tagaatggga tataagaata gaagatgaga
    18901 atgattttga tgttttgaaa tttggtagtg aaattaagga aagttttgaa catgtttata
    18961 aaaatatagg acttgaagat tgtgaattag aaaaagaagt tttatctaat atagaaaaaa
    19021 ctcaacttta tatttgcact ccgatgatat tttatggtgc tgaacttaaa ggtttattct
    19081 cagctcaagt cgttccaaat gatgagtttg taagttctaa ggcgggaaaa aaaatatttg
    19141 cctttataaa ttttgtatat gaaaatgcta aaacaaagcc ttttatgaaa atttctagcg
    19201 aggtttttga taaagaattt ttggattttg gaagaaatat tttattttat caggaaaaaa
    19261 tttggaaaag ggtttatgaa gtatcaacta taggccatga atttggtcat atatttttta
    19321 ttgctaatga taccgaaaaa acaatgaatc agagtggttt ttttaaaaat atagaagaat
    19381 ataaagctac tacaggtgga cttataaatt tcttttatca tgaacaagat gacttgataa
    19441 tgcctgtttt tcatgaactt ataaaaagag ctattggact tatttcttgg caaagggttg
    19501 atgaagttag accttattat acagaaggac ttattcatct tagtttgctt tttgaaagtg
    19561 aagtattgat ttttgaaaat aataatttga agataaattt tgatttaggg cattatgaaa
    19621 aatttaaaga actaacttta aaaaattatc atgaattagc aaaacactat gctttaagac
    19681 ttgatgcaaa agagttttta agtagatttt gtgaaattga agataatatt tttcttccta
    19741 ttatgcctaa gtgtaaagaa tttgttaaat tttattatga tttatacgag aaaattggta
    19801 atgaaattga taatagtgga gaatttgaaa gatataagaa aaaataataa agttttttga
    19861 aaaaaactta aaaaaagctg ttttttactt gatattgttt tttaaatatg ctaaaattag
    19921 gcgtttcaat taaaacaaag gagcttttat gactaaagca gatttcattt cattagttgc
    19981 tcaaacagct gggctaacaa aaaaagacgc tactactgct actgatgcag ttatttctac
    20041 tattactgat gttttagcta aaggtgatag catcagtttt attggttttg gtactttttc
    20101 aactcaagaa agggctgcta gagaagctag agtaccaagc acaggaaaaa taatcaaagt
    20161 tcctgctaca agagttgcaa aatttaaggt aggtaaaaac cttaaagaag ctgttgcaaa
    20221 agcaagcggc aaaaagaaaa aataagactt cggctagata aattctagcc ttctttctta
    20281 attaattcag atattttgta tcttttattt actttatttt tttaaacttt tataaaacta
    20341 tcattattaa acaaaaaagg atattaaaat tatgaaagta catgaaaaag taagtgagct
    20401 tataggaaat actcctatta tacatttgaa aaaatttggt atcaatgttt ttgctaaatg
    20461 tgaattttta aatcctagtc attctataaa agatagagca gcttttgaaa tgattaaaga
    20521 tgctttagat agtaaaaaaa ttaatcaaga tactacaata gttgaagcaa ctagtggaaa
    20581 tactggaatt tctttggcta tgatttgtgc agatttggga cttaaattta ttgctgtaat
    20641 gcccgaatct atgagtttag aaagaagaaa aatgataaca ctctttggcg ctaggttaga
    20701 attaactcct gcaaatttag gaatgaaagg agcggttgat aaagcaaatg aaatattatt
    20761 aaatactcca aattctttta tggtttctca atttgaaaat atttcaaata aaaatgcgca
    20821 tcgtaagaat acggctttag aaattttaag agatttggat aatgaacttg atatttttgt
    20881 agctggtttt ggaactggcg gtactattag tggagttggg gaaatactaa aagaaaaatt
    20941 agaaaaagtg cgtattgttg gagtcgagcc tctaaattct ccattgctta gcaaaggtga
    21001 agcgggaagc cataaaatac aaggaatagg ggcgaatttt atacctgcta ttttaaataa
    21061 agaagttata gatgaagtga tcacagtaag taatgaagat gctataaata cagccaaaga
    21121 acttgccaaa agtggtttaa tggtaggtat atcaagtgga gcaaatgtat ttgccgcaag
    21181 tatgctagca aagaaatttc cagataaaag aattttaact atgctaaacg atacggctga
    21241 aagatacctc tcaactgatc tttttgctta agtataatta ttgagaattt agaaaaattc
    21301 taagttctct taaaatttct tgtggattta aatcgctaat ttctttataa aaatgacctt
    21361 tttcatcaat aagataaagc atattgctat gtgctataga ataacccata aaagaatcat
    21421 ttagatctat tttttgatat tgaacattat attgttttgt tattttttga agagtttttt
    21481 catcttttgc aattaaggca tctgcttttg ggtaaaagta tcgtaaccat tcgtttgtat
    21541 tgcttaagtt attatctcta tttggatcta aagaaataaa aagaaggtga gccttaggat
    21601 tattgatttg ctttaaggct ttgcctacta aactaagagt tgccggacaa acatcagggc
    21661 aataagtata tccaaaatag ataataagct tatctccttt aaaatctttt agggtggttt
    21721 cctcttttaa gtctgatttt aagataaaat cataagaatt ttgatgattt ttaataaaaa
    21781 atattacacc taaaataatg gcaactataa ctataaacaa aataatattt tttttcattt
    21841 ttttagctca aaatcaaaat aaaaccctat gggtttatta ttatccataa attctaccct
    21901 gaaacgcata gtatctaaaa cgcaagcagc aagaactatt ttactttcat agtctgttga
    21961 atttaatcga tgtattttag gtttaatttc gcccatatac atatttaatc cataaatttt
    22021 aattcctaag ttgttataat ttcctagatt tacaatcttt agatttgtaa catctaaaga
    22081 ttgtaagggt ttgggattta gggaaattaa gactttttta ttgttaaaac tatatgtgca
    22141 gtctttaaca ttaagatcgc aagtcaatgg ggtagaaaaa tcagtttttg ttattttttg
    22201 agaatctttt attacataaa aatcaaaaat aatatataaa atagcaataa caaaagcaaa
    22261 agctaggata aaaataattt ttctcattaa ttaaaattct ttagaatcaa tattttttaa
    22321 ctctatggtt ttgtgattat taaattttaa atctaaattt accttcgtgt ctttaataat
    22381 aggttttttt agttttaaaa gcattatatg gtaacctcca gatttaagct ctgtgcttga
    22441 atgagctttt ataataattt caggaatttt ttgcatcatc atttttccat ctttatgtat
    22501 atgtgtatgc agttcactga cttcactgat atcgcttttg gcacttatta gagcaatatc
    22561 cttattagta ttattaaaaa tagtaagaaa aatagcacta ttttgcgcat gaggtggagt
    22621 ttgttttaca aaggcatttt ttacctctat atcattaaca gcccaaagat ttacagcaaa
    22681 aagagcacct aagagaagaa tttttttcat attgtatcct tatttttata atattaaata
    22741 t
//
LOCUS       DAPIWB010000024        22727 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.025, whole genome shotgun sequence.
ACCESSION   DAPIWB010000024 DAPIWB010000000
VERSION     DAPIWB010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22727)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22727)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22727
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.025"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            57..986
                     /locus_tag="RJ266_000746"
     CDS             57..986
                     /locus_tag="RJ266_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2860 family protein"
                     /protein_id="HDV7354516.1"
                     /translation="MKKYLFSCVLASILTQSATAVEFQEGFSGNLSIGVGARDIKSNI
                     STLANSDYLSSRNADNSDSSFIPFIGAELYYGNLIDNDRIFIKNYNGRDISGIALGYE
                     RAYLERFSTSFSVISSLREKAYANPYAIGNREETDVDRYGFKISQLYESDFGKFTTSY
                     LFSKNKYDKDTITQSSLKREGYYHEIELNYNYSLLNLGLNYDYNDADGKAQSYSRYGF
                     SIGTNLAFANDYIFTPNLNLSKYEAVGTDPIFHKKQDGNIVKLNLKVVKNQFLGYNGL
                     YGFANYGIEKRNSDIGFYDETYQIVLTGIGYKF"
     gene            complement(1034..2340)
                     /locus_tag="RJ266_000747"
                     /pseudo
     CDS             complement(1034..2340)
                     /locus_tag="RJ266_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343991.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
     gene            complement(2521..3456)
                     /locus_tag="RJ266_000748"
     CDS             complement(2521..3456)
                     /locus_tag="RJ266_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HDV7354517.1"
                     /translation="MKKIDLIVVGAGPTGIGCAVEAKLKNKEVLILEKSNNICQTLMQ
                     FYKDGKRVDKAYKGCEGTNHGHVPFEDGTKESTIETFQNALKEHNIEVEFGSEVESVK
                     NENGVFLVSTAKGVYECKNIIVAIGRMGKPNKPDYKLPMTLTKIINFNANSVLGNEKI
                     LVVGGGNSAAEYAVDLANSNQVSLCYRKKEFTRLNDINLKDIHEAGNSGKVELKLGID
                     INEVEDDNGKAKVNFTDGTSDIYDRIIYAIGGSTPLDFLQKCGINVDDKGVPLMDENK
                     QSNVKGIFVAGDIATKNGASIVTGLNDAVKILSVL"
     gene            3527..4759
                     /locus_tag="RJ266_000749"
     CDS             3527..4759
                     /locus_tag="RJ266_000749"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HDV7354518.1"
                     /translation="MRNLLENIKKNSQKLLNLTPKDKEKIILKLAQILRENFKIILEA
                     NKKDMANFTKSGAMKDRLLLDEKRILALCEGLEKIAYIEDPIGKISKGWKNYAGLSIQ
                     KMSIPLGLICVIYEARPSLSAEIAALMIKSSNACVFKGGSEAKFTNEAIFTLVNKVLK
                     EFDLQDCFAMFTQRDEILQILAFDDLIDVIIPRGSSNMIQEIANNTKIPLIKQNKGLC
                     HAFVDQSANLDMALKIILNAKCQRVSVCNALETLLIHEKIAKNFISLLIPEFEKFKVK
                     IHAHENALAYFNNSNLKIFKANENTFDTEWLDFALSVKLVKDCDEAIEHINKHSSLHS
                     ETIISNDASNIAKFQRLINSSCIYANASTRFSDGGEFGFGGEVGISTSKLHARGPMGI
                     EDICTYKYIINGEGQIRE"
     gene            4756..5841
                     /locus_tag="RJ266_000750"
     CDS             4756..5841
                     /locus_tag="RJ266_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HDV7354519.1"
                     /translation="MNKIEILKQHFKEIAKLNSSEQVWQMPFFAALGVGIVLGLSVFF
                     GKLNYRLIAMIGALSFLYVPNTPLYHRMAVVMCCSFGIVSSFFLGILTHFLPAIFAFI
                     PIGIMAMGSSILIRYYNIGAPGYFFFVFSCVLGAYSPFEAKDFIFLVGLVFLGAMVAN
                     LMALLYSIVVIYGFKNALPSEIPPREYIGFDAVFVDSLIMGSFVAFSIFIGTFLELER
                     SYWIAISCTAIMQGVTLNSIWIKQIQRIIGTALGVCFAWWLLSKQFHDIELILLMMSL
                     FFIGQFLVNRNYALAMIFFTPYATYLSEAANFMSENADKLILARLIDVVIGSILGLLG
                     GFVIYKPYLRVHFERIAKYIFRIKQKA"
     gene            complement(5838..6635)
                     /locus_tag="RJ266_000751"
     CDS             complement(5838..6635)
                     /locus_tag="RJ266_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDV7354520.1"
                     /translation="MKIDTHAHIFLKKLNTVANARYKPDYDASFKDYKANLDHYDFNK
                     GVLVQPSFLGIDNEFLLQSIEKDENIKAIVVVDENIKFDELKKLKERKACGVRLNLIG
                     KELPNFKSMVWTQFFENLSKLKMQIEIQRDLDNNLVDIVENLIPYGCNIVIDHLARAN
                     ANLTNLEDLICLKNSRIFFKISGFYRAKIDYANNEQAVKFAKKIYEILKEHFPLSNFV
                     FGSDWPHTNFEANINFSSALVAFNEVVVSKKEQEQILGDNACALFGF"
     gene            complement(6646..7939)
                     /locus_tag="RJ266_000752"
                     /pseudo
     CDS             complement(6646..7939)
                     /locus_tag="RJ266_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343986.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
     gene            complement(8058..9062)
                     /locus_tag="RJ266_000753"
     CDS             complement(8058..9062)
                     /locus_tag="RJ266_000753"
                     /inference="COORDINATES: protein motif:HMM:NF022646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2891 domain-containing protein"
                     /protein_id="HDV7354521.1"
                     /translation="MEKFIKQFSFIALENIFRELPNKITHSFNDINDIKPPKLMYPIF
                     YGSYDWHSSVHSHWLLVKILKDFSHFAPKDEIIKALDSQFSKEKAEGELKYLQNPAHK
                     GFERPYGWGWFLKLTLEINLLAKENDKAEIWAKNLEGIADFFVKEFKEFLPKMDYPIR
                     VGTHFNSSFALYFALEYARFKKDQELEYCIIQSAKKWFLNDKNMQALEPCGDEFLSPV
                     LMEAVLLSAVLPKNDFVKFFKVYLPNLEAKEPATLFTPVSVSDRSDGKIAHLDGLNLS
                     RAWCFKILSNFCDENLKILLRNNATEHFDKAIAHIEDDYLGSHWLGSFALLAMDVDIL
                     "
     gene            complement(9072..10025)
                     /locus_tag="RJ266_000754"
     CDS             complement(9072..10025)
                     /locus_tag="RJ266_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF979 domain-containing protein"
                     /protein_id="HDV7354522.1"
                     /translation="MISLDLLYYIVGILFLVFGILSFSNQAKDIKSRISGGVFWISYS
                     FTFLLAGVLPHFVMGCIVILLALIAGFNLLKPAKIEVSKEEKEYEIKHANIYKNKLFI
                     PALMVPLITLIGTFLFPYLSFFENKNATLMALIIGIIISSVVACFMFKASPKRAVKDA
                     AHTMDHISWAALLPQILATLGVVFVSTGMGDQVSKLLSSYISLDNAFIAVAVYCIAMA
                     LFTIVMGNAFAAFPVITAAIALPILIIQMHANPAIIGAIGMLSGFCGTLMTPMAANFN
                     IVPAALLNLDDKNGVIKAQFMSGLVLLVANIFLMYFLAFRF"
     gene            complement(10012..10704)
                     /locus_tag="RJ266_000755"
     CDS             complement(10012..10704)
                     /locus_tag="RJ266_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF969 domain-containing protein"
                     /protein_id="HDV7354523.1"
                     /translation="MEWLLLASIPLIVLGFALKINPFLVVTSVGIYAGLVSGFDFVKV
                     VSDIGKSFVDNRYVAIIWLILPLLAVLERKGLREQAKNLISKIKVASTGRILMCYFVF
                     RQVTAALGLLSLGGHAQMIRPLIAPMAEAAAKLKFKNLTHKDSQKIKAFSAGTDNVAV
                     FFGEDIFIAVHSILFIKAFYESNGIIVEPLHLSVWAIPTGILALIIHCSRLYLFDKRL
                     EKTYKGLSDDKS"
     gene            complement(10864..11433)
                     /gene="efp"
                     /locus_tag="RJ266_000756"
     CDS             complement(10864..11433)
                     /gene="efp"
                     /locus_tag="RJ266_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HDV7354524.1"
                     /translation="MASYSMGDLKKGLKIEIDGIPFKIVEYQHVKPGKGPAFVRIKIK
                     SFIDGKVLEKTFHAGDKCEAPNLEDKTMQYLYDDGENCQFMDTQTYEQVAISDDDVGE
                     AKKWMLDGMMVDVLFHNGKAIGVEVPQVVELKIIETAPNFKGDTQGSNKKPATLETGA
                     VVQIPFHVLEGEVIRVDTVRGEYIERANK"
     gene            11547..11867
                     /gene="rnpB"
                     /locus_tag="RJ266_000757"
     ncRNA           11547..11867
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="RJ266_000757"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(11865..12140)
                     /locus_tag="RJ266_000758"
     CDS             complement(11865..12140)
                     /locus_tag="RJ266_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354525.1"
                     /translation="MKQWLSDFKLALIQEDVNKLENLLDELDMKAFIKNLAKESPSED
                     FLKENANDVFYQVQALLQEAVILIEQKKKTKAVEIQKFQKALTYFKS"
     gene            complement(12121..12507)
                     /gene="fliS"
                     /locus_tag="RJ266_000759"
     CDS             complement(12121..12507)
                     /gene="fliS"
                     /locus_tag="RJ266_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HDV7354526.1"
                     /translation="MQNNLAYNAYSQNQAGIESPQKLIEMLYEGILRFCARAKVAIRN
                     EDIEQRVYFVKRTTAIFIELINTLDYEKGGEVAHYLSGLYTREIQLLSLANLENNEDR
                     INEVINVTKGLLEAWREVHNNETVAQ"
     gene            complement(12519..14447)
                     /gene="fliD"
                     /locus_tag="RJ266_000760"
     CDS             complement(12519..14447)
                     /gene="fliD"
                     /locus_tag="RJ266_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HDV7354527.1"
                     /translation="MAFGSLSSLGFGSGVLTQDTIDKLKEAEQKARIDPYTKKIEENT
                     TKQKDLTEIKTKLLSFQTAVSSLADATVFAKRKVVGSISDNPPASLTVNSGVALQSMN
                     INVTQLAQKDVYQSKGLANDGGFVNAQLNGTADLTFFSNGKEYTVTVDKNTTYRDLAD
                     KINEASGGEIVAKIVNTGEKGTPYRLTLTSKETGEDSAISFYAGKKDSNGKYQKDTNA
                     EKIFDDLGWGLDASASIDPAKDKKGYGIKDASLHIQTAQNAEFTLDGIKMFRSSNTVT
                     DLGVGMTLTLNKTGEINFDVQQDFEGVTKAMQDLVDAYNDLVTNLNAATDYNSETGTK
                     GTLQGISEVNSIRSSILADLFDSQVVDGTTEDANGNKVNTKVMLSMQDFGLSLNDAGT
                     LNFDSSKFEQKVKEDPDSAESFFSNITKYEDINHTGEIIKTGSLSKYLNSNGGNTNGL
                     DFKPGDFTIVFNNQTYDLSKNSDGTNFKLTGKTEEELLQNLANHINSKGIEGLKVKVE
                     SYDQNNVKGFKLNFSGDGSSDFSIKGDASILKELGLSDVNITSKPIEGKGIFSKLKAT
                     LQEMTGKDGSITKYDESLTNDIKSLNTSKDSTQAMIDTRYDTMANQWLQYESILNKLN
                     QQLNTVTNMINAANNSNN"
     gene            complement(14450..14815)
                     /gene="flaG"
                     /locus_tag="RJ266_000761"
     CDS             complement(14450..14815)
                     /gene="flaG"
                     /locus_tag="RJ266_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella length regulator FlaG"
                     /protein_id="HDV7354528.1"
                     /translation="MEISKANGQMDTALANISQRTSETQASLNIQTDRSQSQGGDDGQ
                     QRGVSEKLADIAKKLNEQMDSLDTNVRFGYSDKIGSMYISVTEKSTGREIRQIPSEEA
                     MRLAEYFRDVIGMIFDKES"
     gene            complement(14971..16773)
                     /locus_tag="RJ266_000762"
     CDS             complement(14971..16773)
                     /locus_tag="RJ266_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis decarboxylase"
                     /protein_id="HDV7354529.1"
                     /translation="MKEFIQILKENDLLRVIEEPVDVDLEIAHLAYIEAKKGEKGKAL
                     LFKNPIDKKLNKQYKFPVLMNTFCNEKALNLAFGRDYEEVAEEISKLTKLHIPTSFKA
                     KMDFFMNLLSFKNIPPKRLKKNKALYDYEILNSLEELPMLKTWEDDAGKFITMGQVYT
                     QNLDKTQNNLGMYRLQMSDKNELLMHWQIHKDGANFYHEYKNAGFKKMPVSIAIGGDP
                     LYIWCSQAPLPKGIFELLLYGFIKKTPVKLTPCENGIFVPYDSDVVIEGYVDLEEFKI
                     EGPFGDHTGFYTPAELFPVMKVEKIYAKKDAIYQATVVGKPPLEDKIMGLGTERIFLP
                     LLQTSVPDLLDYNMPENGVFHNLILAKIDAKYPAHAQQIMHAFWGVGQMSFVKHAIFV
                     DKNAPSLKDYDALIPYILNRFDAEKILISEGICDQLDHASPNSCFGGKAGLDACEEIQ
                     VEELEILEDEKLLELFKTKVELLNLKQFYKESKSPIVCILLDKKEKIEQSFDKLLEFK
                     KHFRILVFLDAENKLENSYMLVWRVVNNIDAKRDIFIKEERLGVDASAKGEAEGYLRA
                     WPKQTDCTKSVIEDLILRNILENNPDLFNKFEIF"
     gene            complement(16770..17693)
                     /gene="hemC"
                     /locus_tag="RJ266_000763"
     CDS             complement(16770..17693)
                     /gene="hemC"
                     /locus_tag="RJ266_000763"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HDV7354530.1"
                     /translation="MKLIIATRKSQLALWQSEHVAQILKNTHQIEVLLEGFKTKGDVL
                     LDSPLAKIGGKGLFTKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSND
                     AMLSQNYKDFLSLPKGAKIGTTSLRRKMQLLLLRPDLEIVSLRGNVNSRIEKLKNNKF
                     DAIILAMAGIKRLNLDKQVNFVYEFSKDELIPAASQGALGIESINDEKILKLLKCLND
                     ENALIETSIEREFIATLEGGCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIK
                     KNDFKGFGESLAKEFIAKGAKELLKKAESMI"
     gene            complement(17690..18079)
                     /locus_tag="RJ266_000764"
     CDS             complement(17690..18079)
                     /locus_tag="RJ266_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HDV7354531.1"
                     /translation="MNYKLSLSPLFVLEIIASILFIVFFGFGNFLFFILLSMIFGAVL
                     LGIFWKNMLEFQMGGLKDMLTQFSFVIAGFLLIFPGIITSVFGIFVFFFGIALKLITK
                     SKYQYTKQEYQNSNEEIIDVEIIEDRK"
     gene            complement(18076..19785)
                     /locus_tag="RJ266_000765"
     CDS             complement(18076..19785)
                     /locus_tag="RJ266_000765"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HDV7354532.1"
                     /translation="MMRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFL
                     PLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKE
                     NEFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKD
                     GYSFHANEEDLGREFELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNG
                     EDDILICENCDYAANVEAAKRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA
                     FYTIKAVVKKAIYENESKLVVFFIRGSDDLQEIKAQNACSALELVDASEEELEKAGLV
                     AGFIGFVGLKDVDFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKE
                     GDCCAKCGAKLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSR
                     LLAVAIEANHDEKGCIWNKTLAPFVLEIIISNLKDEKALEFANKLYEDLTNLGLEVLL
                     DDRNERFGVKMNDFELMGFPYALVIGKGLENNEIEFIQREGLIKELIKTDELMEILKK
                     KVL"
     gene            complement(19769..21067)
                     /locus_tag="RJ266_000766"
     CDS             complement(19769..21067)
                     /locus_tag="RJ266_000766"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HDV7354533.1"
                     /translation="MYYCISFTHKNTDIALREKLSFSNEAKKSEFLKIISTHENIEEC
                     LVISTCNRVEIVAFVKMACAEFIVKSLALLCDVDKDILLEKADIFEDSGAIHHLFSVA
                     SSLDSLVVGETQIAGQLKDAFAFAVKNNFCGVHLSRAVHSAFKCAAKVRNETQISKNP
                     ISVASVAVAKAKELADLTQKKAVVIGAGEMGELAAKHLIAAGAKVIILNRDLQKAKDL
                     CERLGVLSEYDSLENLKKYLNQYEFFFSATNAPNAIITNSLIEELPYKRYFFDIAVPR
                     DIDINENENISVFAVDDLEIVVQKNLALREQEARMAYGIIGRETSEFFRYLNDLALMP
                     IIKAIRLQAKEYADKQLEIALKKGYLKKSDKEEARKLIHQVFKAFLHTPTVNLKHLQG
                     KMQSDTVINAMRYVFDLQNNLEGLNQYKCEFDMENNDEIY"
     gene            complement(21067..21960)
                     /locus_tag="RJ266_000767"
     CDS             complement(21067..21960)
                     /locus_tag="RJ266_000767"
                     /EC_number="2.5.1.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexaprenyl-diphosphate synthase"
                     /protein_id="HDV7354534.1"
                     /translation="MQKIDELIKQFLEELGYEPILNMLSNVKSGKKLRSKLLLAIADE
                     SEIAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAF
                     YELSKMDARFASIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASA
                     RCGAILAGLYEKDFAEYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPY
                     IYLYENLQEQDRIYLQTLFKKDLNENEKEWLKTKFEEQKALEKAILEAKTYAKKARKA
                     IEKYDNNKLNDIIKAMIDREF"
     gene            complement(21974..22510)
                     /locus_tag="RJ266_000768"
     CDS             complement(21974..22510)
                     /locus_tag="RJ266_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exporting protein"
                     /protein_id="HDV7354535.1"
                     /translation="MFKISPYLICIFFIFSNVLASEPTFDYTYKFILKKDERASVQIK
                     EIGYEDKVQNFDFYWTLFDNTNIIVHSKFRKYPRQFVMSLRRNLDWVTQTLIPDYTNP
                     HIDRARLILEFSGYNKGLATFTVYIEDKESRLMVEFLDPRKKALQNPPQNNQVVPMIN
                     FNEPQVKPLTSKENNNSN"
     gene            complement(22513..>22727)
                     /locus_tag="RJ266_000769"
     CDS             complement(22513..>22727)
                     /locus_tag="RJ266_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2018 family protein"
                     /protein_id="HDV7354536.1"
                     /translation="EIIQNGNLGALEKVFEEFFADHIAMVELLEKQGLTEMDVKNFIL
                     ENGDFIEERQNDIYIELGAKILGHEG"
BASE COUNT         7949 a         4092 c         2827 g         7859 t
ORIGIN      
        1 agttacaatt ataaatgtaa tttaattaca aacaacaaac atttcaagga gaacatttga
       61 aaaaatattt attttcctgt gttttagcct ccattttaac ccaatcagct acggctgtag
      121 aatttcaaga aggttttagt ggaaatttaa gcataggtgt gggtgcaagg gatattaaaa
      181 gtaatatttc aaccttggca aacagtgatt atctaagcag tcgcaatgct gataattcag
      241 actcctcttt cattcctttt atcggtgcag aactttacta tggtaatctt atagataatg
      301 atagaatttt tattaaaaac tacaatggaa gagatatcag cggtatagct ttaggctacg
      361 aaagagctta tttagagcgt tttagcactt ctttttctgt aatttcctct ttaagagaaa
      421 aagcttatgc aaatccttat gcaataggaa atagagaaga aactgatgtt gatagatatg
      481 gttttaaaat ctctcaactt tatgaaagtg attttgggaa atttaccact tcatatttat
      541 ttagcaaaaa caaatatgat aaagacacta tcacacaaag ctctttaaaa agggagggat
      601 attatcacga aattgaatta aactataatt atagcttatt aaacctaggg ttaaattatg
      661 attacaatga tgcagacgga aaagctcaaa gctattcaag atatggtttt agtataggaa
      721 caaatttggc ttttgctaat gattacatct tcactccaaa tttaaatctt agcaaatatg
      781 aagcagtagg aactgatcct atcttccaca aaaaacaaga tggtaatata gttaagctta
      841 atttaaaagt tgttaaaaat caatttttgg gttataacgg actttatggt tttgcaaatt
      901 atggcataga aaaaagaaat agcgatatag gattttatga tgaaacctat caaattgtcc
      961 taactggtat aggatataaa ttctaaaaat tacaaaaaag ctcctttgat aaaatttaaa
     1021 aaagatctat ctcctataaa gatagatctt taaaaattct tttaagaaaa atccaagcta
     1081 aaatcaaaac acaaaattca gcaaaaaatg gacttagcca tactccattt aaacccataa
     1141 aacaagataa aaacaaaaga aaaaacaaag gtataaataa attttgcgcc aaacttaaaa
     1201 ccaaagaaaa gcttgcctta ttaaaagctg tcaaaaaaga accacttaga acattaaacc
     1261 atgcaaaaaa ataattaaaa gcaaaaagca tcaaaattct tgattgtttt cttttgtaaa
     1321 aagcgtgatt aaattttctc caaatatcaa tataagcact atagagaata aagataaaaa
     1381 tccccctgca aaaaatacca cttttataat agctttgatt cttgaaaaat cttttttagc
     1441 atagttgtaa ctaagcgcag gctgcattgc atcacctata gcaataataa gcattataat
     1501 aaaactatca atatataaaa ctatagaaaa ggctgccacg gcttgagtat cagaaatttt
     1561 taataaaaca aaatttgcaa aaatactata caaagatcct gaaatattgc caaaaaactc
     1621 actgcttccg ttataaagaa tatttttaaa aatttttaaa ttcatatata ggctcgaaat
     1681 tttaagctct aaattttgaa acaagaaagg aaaaattcca aaaataccac ctaaaacaag
     1741 tcccaaacaa gttgcaagag cagctgaaaa taagccccaa cccaactcga ctataaaaat
     1801 ataatcaagc actatattgc ttaatgctat aatcacattc attaccatac tataagcagt
     1861 ttttccgcaa attcttaaat aattatccaa agcaaaagaa agcatagtaa agggtgcaaa
     1921 caaagcaaaa acaaacatac attctttagt catcgtttta atctcatcgc taacatttaa
     1981 acaatcaatc aaaacaggtc ctaaaaaata ctccaaaatt ccgataaaac aagagattat
     2041 aaagataatc aacatacttg agctaaatat ctttctagct aaattcttct tgcctaaacc
     2101 taaatgcata gaaatttgca ctgctgatcc tatggctatc atatcagcca aagcaaaaga
     2161 catcatgata aagggaataa tcaaggctag tgccgctaaa gcatcacttc ctagatattt
     2221 tccaacaaaa attccatcaa ctatataata aaaagaaata aaagccatgc ttataacatt
     2281 tggcacggca tattttacaa aaagcctaaa agggcttaag gtgctaaaaa tacttgacat
     2341 aataatcctt aaaatattta aaattaaaaa tattttaaac cgctaataaa atgccaaaag
     2401 tcctagtatg taagaattta aataaagtaa tttcgcaata agtttattaa tatttatttt
     2461 attttgcata tgaattttct agattaaact aaaataaaaa tttagcccaa aggctaaatt
     2521 ttaaagcaca gaaagaattt tcacagcgtc atttaaccct gtaactatac ttgctccatt
     2581 tttagtagca atatctcctg ctacaaagat gcctttaaca ttgctttgtt tgttttcatc
     2641 cattaaaggc acgcctttat catcaacatt aatcccacat ttttgtaaaa aatcaagtgg
     2701 agtagaacca ccaatagcat aaatgattct atcataaata tcgcttgtac catcggtaaa
     2761 atttacttta gctttgccat tatcatcttc tacttcatta atgtcaattc ctagttttaa
     2821 ctctacctta cccgaatttc cagcttcgtg aatatcttta agatttatat catttaatct
     2881 tgtaaattct tttttacgat aacaaaggct aacttgattt gaatttgcca aatccacagc
     2941 gtattctgct gctgaatttc cgccacctac aacaagaatt ttttcatttc ccaaaactga
     3001 attggcatta aaattaatga tttttgttaa agtcatagga agtttgtaat caggtttatt
     3061 aggtttaccc attctaccta tagcaacaat aatgttttta cactcataaa cacctttagc
     3121 tgtacttact aaaaaaactc cattttcatt tttaacgctc tcaacttcag aaccaaattc
     3181 aacttctata ttgtgctctt ttaaagcgtt ttgaaaagtt tctatagtgc tttctttggt
     3241 gccatcttca aaaggaacat gtccgtgatt ggttccttcg catcccttat aagctttatc
     3301 tactcttttg ccatccttat aaaattgcat taaagtttga caaatgttat ttgatttttc
     3361 tagtatcaaa acttctttgt ttttaagctt ggcttcaact gcacagccta tccctgttgg
     3421 acctgcacct actacaatta aatctatttt tttcatttat atttaccttt caattctaaa
     3481 tttttttgta taatttatca agttttttgt aaataaagga ttaaaaatgc gaaatttgct
     3541 tgaaaatatt aagaaaaatt ctcaaaaact acttaactta acacccaaag ataaagaaaa
     3601 aattattcta aaattagctc aaattttaag agaaaatttc aaaattatcc tagaagcaaa
     3661 taaaaaagat atggcaaatt tcacaaaaag cggagcaatg aaagataggc ttttgttaga
     3721 tgaaaaacgt attttagctc tttgcgaagg cctagaaaaa atcgcttaca tcgaagatcc
     3781 tataggcaaa atttctaaag gctggaaaaa ttatgcgggt ttgagcatac aaaagatgag
     3841 tattccttta ggactcattt gtgttattta cgaagcaagg cctagtctta gcgctgaaat
     3901 cgcagcttta atgataaaaa gttccaatgc ttgtgtattt aaaggcggaa gtgaagcaaa
     3961 atttacaaat gaggctatat ttactcttgt taataaagta cttaaggaat ttgatttgca
     4021 agattgtttt gctatgttta cccaaagaga tgaaatcttg caaattctag cctttgatga
     4081 tttaatcgat gtgatcatac ctcgcggaag ttcaaatatg atacaagaaa ttgcaaacaa
     4141 taccaaaatt cctctcatta agcaaaataa aggcttgtgt catgcttttg tagatcaaag
     4201 tgctaactta gatatggctt taaaaataat ccttaatgca aagtgtcaaa gagtaagtgt
     4261 ttgtaacgct ttagaaacgc ttttaatcca tgaaaaaatt gctaaaaatt ttataagtct
     4321 tttaatacct gaatttgaaa aatttaaggt aaaaattcac gcccatgaaa atgctttggc
     4381 ttattttaac aactcaaatt taaaaatttt taaagcaaat gaaaatacct ttgatacaga
     4441 atggcttgat tttgctttaa gtgtaaaatt agtaaaagat tgcgatgaag ctatagagca
     4501 tatcaataaa cacagctcct tgcattctga aaccattatc tcaaatgatg cttcaaatat
     4561 cgctaaattt caacgcctta taaactcatc ttgtatttat gctaatgctt caacgcgttt
     4621 tagcgatgga ggagaatttg gctttggtgg agaagttgga atttcaacca gcaaattgca
     4681 tgcaagaggt cctatgggga ttgaagatat ttgcacttat aaatatataa tcaatgggga
     4741 aggacaaatt cgagagtgaa taaaatagaa atactaaagc aacactttaa agaaattgct
     4801 aaattaaatt caagcgaaca agtttggcaa atgccttttt ttgcggcttt aggcgtaggt
     4861 atagttttag ggcttagtgt attttttgga aaattaaact atagactcat tgccatgata
     4921 ggagctttgt cttttttata tgttccaaac actcctttat atcatagaat ggctgttgtg
     4981 atgtgctgtt cttttggcat agtttctagt tttttcttag gaattttaac tcattttttg
     5041 cctgcaattt ttgccttcat ccctatagga attatggcca tgggaagttc tattttaatt
     5101 agatactata acattggtgc acctggatat tttttctttg tattttcttg tgttttagga
     5161 gcctattctc cttttgaagc taaggatttt atctttttag taggtcttgt ttttcttgga
     5221 gcaatggtag ctaatttaat ggctttgtta tattctatcg ttgtgattta tggatttaaa
     5281 aatgctttac ctagcgaaat tccacctaga gaatacatag gttttgatgc agtttttgtg
     5341 gattctttga tcatgggttc ttttgtggct ttttctatat ttataggaac ttttttagaa
     5401 cttgaaagaa gttattggat agccatttct tgcacagcta ttatgcaagg tgtaacttta
     5461 aattctatat ggattaaaca aattcaacgc atcataggaa cggccttagg agtatgtttt
     5521 gcatggtggc ttttatctaa acaatttcac gatatagagc ttattttact tatgatgtct
     5581 ttgtttttta taggacaatt tttagtcaat cgaaactatg ctttagctat gattttcttt
     5641 actccttatg ctacttatct ttcggaagca gctaatttta tgagtgaaaa tgcagataaa
     5701 ttaatactcg ctcgtttaat tgatgttgta ataggaagca ttttagggct tttaggtggt
     5761 tttgtgattt acaaacctta tctaagagtg cattttgaac gcattgcaaa atacatcttt
     5821 aggataaaac aaaaagctta aaagccaaat aaagcacaag cattatcccc taaaatttgc
     5881 tcttgttctt ttttagatac gacaacttca ttaaaagcca ctagagccga tgaaaaatta
     5941 atatttgctt caaaatttgt atgtggccaa tcgcttccaa aaacaaaatt gctaagtgga
     6001 aaatgttctt ttaaaatttc atatattttc tttgcaaatt ttacagcttg ttcattatta
     6061 gcatagtcta tttttgctct ataaaaaccg ctaattttaa aaaatattct agagtttttt
     6121 aagcaaatta aatcctctaa atttgttaag tttgcattag ctcttgctaa atgatcgata
     6181 acaatattac aaccataagg aattaaattt tcaacaatat caacaagatt attatctaaa
     6241 tctctttgaa tttctatttg cattttaagc ttacttaaat tttcaaaaaa ttgagtccaa
     6301 accatacttt taaaatttgg taattctttg ccaattaaat ttaatctaac tccacaagct
     6361 tttctttctt ttagtttttt aagctcatca aatttaatat tttcatcaac cacaactata
     6421 gcttttatat tttcatcttt ttctatactc tgaagcaaaa attcattatc aatacctaaa
     6481 aaacttggct gaactaaaac ccctttatta aaatcataat gatctaaatt tgctttataa
     6541 tctttaaaac tagcgtcata atcaggctta tatcttgcat ttgcaaccgt atttaacttt
     6601 ttcaaaaata tatgtgcgtg agtatcaatc ttcattaaat tatccttata aaataaaact
     6661 cattataata gtagctaaaa tcgccgctat aaatcctata ggcacagctt taataagtaa
     6721 atctttaaat aatttttcct tatatttatc agggcaagat cctaaaatta gacttcctcc
     6781 agaagaaaaa ggagaaatag cagaagcttg agcccctaca acaatacaag aaaaaagcaa
     6841 tgcctcgctt aatccactac ttgcagcaat gcttggaact ataggaaaaa gcgctggagt
     6901 aaccacaccc aaagtacttg aaaaaagcga cataaaagct gcaatagcac acattattaa
     6961 cggaataaaa atcacattga tctcattttc tacaagatct gaaaataatt ttatagcccc
     7021 tgcttcaacc gctatgctaa ttaacatccc tactccacaa atcattatca aggttcccca
     7081 aggaattaaa gcaacaactt gtttctcatc ggccaatttt aaaaataaag caatggcaac
     7141 aaaaatcatg gctatcatag ctatatctat ttttttatta aaataactaa ttgtctcatt
     7201 atgtggaaaa ataatattta gcacaggaaa gattaaaaca acaacaatca tcataaacat
     7261 aagaattaaa gtagtttttt gtttataatc aaatgaatca ggttttgaaa taacactgat
     7321 ttttatatta tttttaaaag cattaaacac aaaaaaagat aataccacaa taggcaaaat
     7381 tatagtaaaa gcaaaaataa tactagaatt tacaaaagct tcatttgctt caatgcctga
     7441 attttccatc aatcctcgaa aaataatccc actttgagaa gtcataaaat ttgctcctcc
     7501 caaagcacca tagtttatag ccatagctcc agcaattttg cttaaaccga ttttatcgca
     7561 aagtaaaaaa gtaagtggtg ccataaaagc taaaactgta taaaaacctg ctcctaaaag
     7621 cagctataat agcactaacc acaaaaataa caaaaggaag caaataagga tgattagcaa
     7681 aacgatacat caaatgtcca gctaattttt caagagttcc atttacggtt gcaaaattat
     7741 aaaacaatga aacagcaaaa ataacaaaaa atatagaaat aggccaaaaa gctatgattt
     7801 ttttaggagc taaattcata aaaaaagctc ctataatata agcaaaaatc atagcaaaaa
     7861 ttccaacatt atgtctagca atatagccca aaataatagc cactataata gtagagatga
     7921 ttaaaaaaac cattatcatc ctttaaaata ttatagggct tataatatca aaaaatatat
     7981 ttttcaaagc ataaaaacaa aatctaaatt taaaaaatat ctatttagta acaaatttac
     8041 tcatcttatg aaatttttta taaaatatcc acatccatag caagcaaagc aaagcttcct
     8101 agccaatgcg acccaagata atcatcttct atatgagcta tggctttatc aaaatgctct
     8161 gtagcattat ttcttaaaag aatttttaaa ttttcatcgc aaaaatttga aagtatttta
     8221 aaacaccaag cacgacttaa atttagccca tctagatgtg ctattttacc atcgctccta
     8281 tcactcacac tcacaggggt aaataaagtt gcaggctctt ttgcttctaa atttggcaaa
     8341 tatactttaa aaaattttac aaaatcattt ttaggtaaaa cagcacttaa aagcaccgct
     8401 tccatcaaaa caggagataa aaactcatct ccacaaggct ctaaagcttg catattttta
     8461 tcatttaaaa accacttttt agcactttgg atgatgcaat actccaattc ttgatctttt
     8521 ttaaatcttg catattctaa agcaaaatac aaagcaaaag agctattaaa atgggttcca
     8581 actcgtatag gataatccat cttaggtaaa aactccttaa attctttaac aaagaaatca
     8641 gctatgcctt ctaaattttt agcccaaatt tcagctttgt cattttcttt agcaagtaaa
     8701 tttatctcca aagtcagttt taaaaaccat ccccatccat aaggtctttc aaaacctttg
     8761 tgtgcagggt tttgaagata tttaagctct ccttctgctt tttctttgct aaattgagaa
     8821 tctagagctt tgatgatttc atcctttgga gcaaaatgag aaaaatcttt taaaattttc
     8881 accaaaagcc agtgagaatg cacgctagaa tgccaatcat aagaaccata aaatatagga
     8941 tacataagtt ttggcggttt aatatcattg atatcattaa aagaatgtgt aattttattt
     9001 ggcaattctc taaaaatatt ttctagtgca ataaagctaa attgttttat aaatttttcc
     9061 attgtttctc cttaaaatct aaaagctaaa aaatacatta aaaagatatt agccacaagc
     9121 aaaacaagtc ctgacataaa ctgggcttta attacgccat ttttatcatc caaatttaaa
     9181 agtgccgcag gaactatatt aaaatttgca gccataggcg tcattaaagt tccgcaaaat
     9241 ccactaagca ttccaatcgc tcctataata gcaggatttg catgcatttg tatgattaaa
     9301 atcggcaaag caatagcagc agtaatcaca ggaaaagctg caaaagcatt gcccattact
     9361 atagtaaaaa gcgccatagc gatacaatac acagctactg caataaaagc attatctaaa
     9421 ctaatataac tagataaaag tttagatact tgatcgccca ttcctgtaga aacaaaaact
     9481 accccaagtg tagccaaaat ttgcggtaaa agcgctgccc aactaatgtg atccatagta
     9541 tgtgctgcat ctttaacagc tcttttagga gaagccttaa acataaaaca agcaactact
     9601 gaagaaataa ttatacctat aatcaaagcc atcaatgtag catttttatt ttcaaaaaaa
     9661 ctcaaatagg gaaataaaaa agtcccaata agtgtaatca aaggaaccat taaagcagga
     9721 ataaaaagtt tatttttata aatatttgca tgttttatct catattcttt ttcttctttg
     9781 ctaacttcga tctttgctgg ttttaataaa ttaaatcctg ctataagtgc tagtaaaatc
     9841 actatacaac ccatcacaaa atgaggcaaa actcctgcta gtaaaaaagt aaaactataa
     9901 cttatccaaa ataccccgcc gcttattctt gattttatat ctttagcttg attagaaaaa
     9961 cttaaaattc caaaaactaa aaataaaatt cctacaatat aataaagtaa atcaagactt
    10021 atcatcactc aaccctttat aagttttttc caatctttta tcaaataaat aaagtctaga
    10081 gcaatggata attaaagcca aaattccagt tggtatagcc caaactgata aatgcaatgg
    10141 ctcaacaata ataccattgc tctcataaaa agctttaata aataaaatag aatgcacggc
    10201 tataaaaata tcctctccaa aaaatacagc aacattatcc gttcccgcag aaaaagcttt
    10261 gattttttga ctatctttat gtgttaagtt tttaaattta agcttagctg cagcttctgc
    10321 cataggggct attaaaggtc ttatcatctg tgcatgtccg cctaaagata aaagccctaa
    10381 agctgcagta acttgtctaa aaacaaaata acacattaaa attcgtcctg tactggcaac
    10441 ttttattttg gatattaaat ttttagcctg ctctcttaag cctttgcgtt ccaaaacagc
    10501 aagtaaaggt aaaataagcc aaattatagc aacatagcga ttatctacaa aagattttcc
    10561 tatatcacta acaaccttaa caaaatcaaa acctgaaaca agtccagcat aaattccaac
    10621 tgaagttacc actaaaaagg ggttaatctt taaagcaaaa cctaaaacaa tcaaaggtat
    10681 agaagcaaga agtaaccatt ccatcaacca tctccacaat atgaattaga aatattatag
    10741 aaattttaaa ttgaagaaaa gtttaaaaaa atatttttaa gaatggaatg agaaattaag
    10801 taacaaaata aattttatat aaatttaaaa aagccttgga atagtccaaa agcttttttt
    10861 gtattatttg ttcgctcttt ctatatactc accacgcaca gtatcaacgc gtataacttc
    10921 accttctaac acatgaaaag gaatttgcac tactgcgcct gtttccaatg tagccggttt
    10981 tttatttgat ccttgagtat cacccttaaa atttggagct gtttcgatga ttttgagttc
    11041 aacaacttgt ggaacttcta cgccgatagc tttaccatta tggaaaagca catctaccat
    11101 cataccatca agcatccatt ttttcgcctc acctacatca tcatcactaa tagctacttg
    11161 ttcatatgtt tgcgtatcca taaattggca attttcacca tcatcataaa gatactgcat
    11221 agttttatct tctaaatttg gagcttcaca tttatcacct gcatggaaag ttttttcaag
    11281 tactttacca tcaataaaag atttgatttt aatacgcaca aaagcaggac ctttgcctgg
    11341 ttttacatgc tgatactcaa ctattttaaa aggaattcca tcgatttcta ttttaagtcc
    11401 cttttttaaa tcacccattg aataagatgc cataaatttc ctttgttaaa aaataaaaaa
    11461 caattttatc aaattttgat tgatatcaca ataaaattat tttatttgat gaaaaaataa
    11521 gtaaaattac gttaaaatcc aaatttaaag catagtaaat gctcgcttct ttttaggaga
    11581 ggaaagtccg agctgctaaa gacaaacatt ccatctaaca gatggctagg gtaacctaag
    11641 ggatagtgca acagaaagaa aactaccacg caagtggaaa aggtgaaacg gcggggtaaa
    11701 agcccaccag cgattttggt aacaatttcg gctatgtaaa cccaatgtgc agcaagaagg
    11761 gatggttagc gtctttgttt taacccttcg cttgattttg tttgcaaaaa caaaactaga
    11821 taaatgagca ttcaagacag aactcggctt atcgctatgc ttttttaaga tttaaaatat
    11881 gtcaacgctt tttgaaattt ttgaatttca acagcttttg tttttttctt ttgttcaatc
    11941 agtataacag cttcttgcaa aagagcttga acttgataaa atacatcatt tgcattttct
    12001 tttaaaaaat cttctgaagg cgattctttg gctaaatttt taataaaagc tttcatatca
    12061 agttcatcaa gtaaattttc aagtttattg acatcttctt ggattaatgc aagtttaaaa
    12121 tcactgagcc actgtttcat tgttatgcac ttctctccaa gcttctagca aacctttggt
    12181 tacatttata acttcattga ttctatcttc gttattttct aaatttgcca aagataaaag
    12241 ttgaatttct cttgtataaa gcccgcttaa ataatgcgcc acttctccgc ctttttcata
    12301 atctaaagta ttaatgagct ctataaaaat agccgtggtt ctttttacaa aatacactct
    12361 ttgttctata tcttcatttc ttatggctac tttagctctt gcacaaaaac gcaaaattcc
    12421 ctcataaagc atttcaataa gtttttgcgg agactctatc cccgcttgat tttgagaata
    12481 agcattataa gctaaattat tttgcatctt ttttatcctt aattattaga attgtttgcc
    12541 gcattaatca tattagttac agtatttagc tgttgattga gtttatttaa aatactctca
    12601 tattgcaacc attgattcgc cattgtatca tatcttgtat caatcatagc ctgagttgag
    12661 tctttagagg tatttaatga tttaatatca tttgtcaaac tctcatcata ttttgtaatt
    12721 gaaccatctt ttccagtcat ctcttgcaac gtggctttta attttgaaaa aataccttta
    12781 ccttctatag gtttagaggt tatatttaca tcagacaaac ctaattcctt gagaatgcta
    12841 gcatctcctt tgattgaaaa atccgagcta ccatctccgc taaaattcaa cttaaaccct
    12901 ttaacattgt tttgatcata agattcaacc ttaactttta aaccttcaat acctttgctg
    12961 tttatatgat tagctaaatt ttgaagcaat tcttcctctg tttttcctgt taatttaaaa
    13021 ttagtaccat cagaattttt agataaatca tatgtttgat tattaaaaac tatggtaaaa
    13081 tctcctggtt taaaatctaa accattagta ttacctccat tggaattaag atatttactt
    13141 aaacttcctg tcttaattat ctctcctgtg tgattaatgt cttcgtattt agtaatattt
    13201 gaaaaaaaac tttcagcaga gtctggatct tctttaactt tttgttcaaa tttagaagaa
    13261 tcaaaattca aagtgcctgc atcatttaaa cttaagccaa aatcctgcat agaaagcata
    13321 accttagtgt tcactttatt accatttgca tcttcagtag ttccatcaac aacttgagaa
    13381 tcaaacaaat cagcaagaat gcttgagcgt attgaattta cttcactgat gccttgtaaa
    13441 gttccttttg ttccagtttc actattgtag tcagttgcag cattaagatt ggttactaaa
    13501 tcattataag catccaccaa atcttgcatg gcttttgtca caccttcaaa atcttgctgt
    13561 acatcaaaat taatttcacc tgttttattt aaagttaaag tcattcctac accaagatcg
    13621 gtaacagtgt tacttgatct aaacatctta ataccatcaa gtgtaaattc tgcattttgc
    13681 gcagtttgga tatgcaaaga agcatcctta atgccataac cttttttatc cttagctgga
    13741 tcaatagaag ccgatgcatc taatccccat ccaagatcgt cgaatatttt ttctgcattt
    13801 gtatcttttt gatatttacc attcgaatct ttttttcccg catagaaact tatcgcactg
    13861 tcttcgcctg tttctttgct ggttaaagtt aagcggtaag gagtgccttt ctctcctgtg
    13921 tttacaatct tagcaacaat ctctcctcca ctagcttcat taattttatc agctaaatct
    13981 ctataggttg tgtttttatc taccgtaaca gtatattctt tgccatttga aaaaaaagta
    14041 agatcggcag ttccatttaa ttgtgcatta acaaaaccac cgtcatttgc taatccttta
    14101 ctttgataca catctttttg tgcaagttga gtaacattga tattcatgct ttgtaaagca
    14161 acacccgaat taactgtaag acttgctgga ggattatcgc taatacttcc tacaactttt
    14221 cttttcgcaa aaaccgtagc atcggctaat gatgaaacag ccgtctgaaa acttagtaat
    14281 ttagttttga tttctgttaa atctttttgt ttggttgtat tttcttcaat ttttttagta
    14341 taaggatcaa tacgagcttt ttgctctgct tcttttaatt tatctatagt atcttgagtt
    14401 aaaaccccag aaccaaatcc taaactagat agactaccaa atgccatttt taactctcct
    14461 tatcaaatat cattcctatc acatccctaa aatactcagc taatctcata gcttcttcgc
    14521 taggaatttg acggatttcc cttccagtac ttttttcagt cacgctaata tacatagaac
    14581 cgattttatc actataacca aaacgaacat tggtatctag agaatccatt tgctcattta
    14641 acttttttgc aatatcagct aacttttcac tcacacctcg ttgctgtcca tcatcgcctc
    14701 cttggctttg acttctatcg gtttgaatgt ttaaactagc ctgtgtctca cttgttcttt
    14761 ggctaatgtt tgccaaagct gtatccattt gcccatttgc cttcgatatt tccattttaa
    14821 aatccttttt aaaatttcct attgctagtt aaaagcttat atcgacaaat ttataaattt
    14881 atgaacacct ataaagaaaa ttttattttt caataataaa aaataataag caaaaactgt
    14941 gccaaaattt taaaataaat ctcaattatc ttaaaaaatt tcaaatttat taaaaagatc
    15001 tggattattt tctaaaatat tacgcaagat caaatcttct atcacgcttt tagtgcaatc
    15061 tgtttgctta ggccaagctc ttaaataacc ctcagcttca cctttagcac ttgcatctac
    15121 tccaagtctt tcttctttga taaaaatatc tcttttagca tctatattat ttaccacacg
    15181 ccaaacaagc atataagaat tttcaagctt attttcagca tctaaaaata ctaaaatcct
    15241 aaaatgtttt ttaaattcta aaagtttgtc aaaactttgt tcgatttttt cttttttatc
    15301 aagcaaaata caaactatag gacttttact ttctttataa aattgcttta aatttaaaag
    15361 ttctacctta gttttaaaaa gttctagtaa tttttcatct tctaaaattt caagctcttc
    15421 aacttgtatt tcttcacaag catcaagtcc tgctttaccc ccaaaacaag aattaggcga
    15481 agcatgatct aattgatcac aaattccttc tgaaattaaa attttttccg catcaaaacg
    15541 atttaaaata taaggaatta aagcatcata atctttcaaa gaaggtgcat ttttatccac
    15601 aaaaattgca tgtttaacaa aactcatttg ccctactccc caaaatgcat gcataatttg
    15661 ttgcgcatga gcaggatatt ttgcatcgat ttttgctaag ataagattat gaaagactcc
    15721 attttcaggc atattataat caagtaaatc aggcaccgaa gtttgaagca agggtaaaaa
    15781 aattctttca gtaccaagcc ccatgatctt atcttctaaa ggaggtttcc ctacaaccgt
    15841 tgcttgatag attgcatctt ttttagcata aattttttct actttcatca caggaaaaag
    15901 ttcagcagga gtataaaaac ccgtatgatc tccaaaagga ccttcgattt taaactcttc
    15961 taaatccaca taaccttcaa taactacatc actatcataa ggcacaaaaa taccattttc
    16021 acaaggagta agttttacag gagttttttt aataaaacca taaagcaaaa gttcaaaaat
    16081 tcccttaggt aaaggtgctt gagaacacca aatataaagc ggatctccac ctatggctat
    16141 acttacaggc atttttttaa aaccagcatt tttgtattcg tgataaaaat ttgctccatc
    16201 tttatgaatt tgccaatgca ttaaaagttc atttttatca ctcatttgca aacgatacat
    16261 tccaagatta ttttgagttt tatctaaatt ttgtgtataa acttgcccca tggtaataaa
    16321 tttacccgca tcatcttccc aagtttttag catgggaagt tcttcaaggg agtttaaaat
    16381 ttcataatca tacaaggctt tatttttttt cagtctttta ggaggaatat ttttaaaact
    16441 taacaaattc ataaaaaaat ccatttttgc tttaaaactc gtaggaatat gaagcttggt
    16501 gagttttgaa atttcttcag ccacctcttc ataatcacgc ccaaaagcta aatttaaagc
    16561 cttttcattg caaaaagtat tcatcaaaac aggaaattta tattgtttat ttaatttttt
    16621 atctatagga tttttaaata ataaagcctt acctttttct ccttttttag cttctatata
    16681 agctaaatga gcgatttcaa gatctacatc tacaggctct tcaattaccc ttaaaagatc
    16741 attttctttt aaaatttgaa taaattcttt catatcatac tctcagcttt ttttaaaagt
    16801 tctttagcac ctttagcaat aaactcctta gccaaactct ccccaaaacc tttaaaatca
    16861 ttctttttaa tcattctttt atcttttaaa atttcacttc catcgggtag tccaagtacc
    16921 gcacgcacac aaatttcatc tcctaaaagc tctgcgttaa tacctatagg aacttgacaa
    16981 cccccttcta aagtagcaat aaattctctt tcaatgcttg tttcaatcaa agcattttca
    17041 tcatttaaac attttaaaag ttttaaaatt ttttcatcat ttatactttc tatacctaaa
    17101 gctccttgag aagctgcagg aataagctca tctttactaa attcataaac aaaattcact
    17161 tgcttatcta agtttaagcg tttaattccc gccatagcta aaataatcgc atcaaattta
    17221 ttatttttta atttctctat acgagaatta acattaccac gcaaagaaac aatttctaaa
    17281 tcaggtctta acaataaaag ctgcatcttg cgtctaagac tagtagtgcc tatttttgca
    17341 ccttttggca aagaaagaaa atctttataa ttttgactta gcatagcatc attgctttgc
    17401 tctcttttac ttaccgccgc caaaactaaa ccttgaggaa aaaaactagg cacatctttt
    17461 aaactatgta ctgctaagtg tgcttctttt ctcaacatac tttcttcaag ttcttttgta
    17521 aaaagtcctt taccaccaat ttttgccaaa ggagaatcca gcaaaacatc gccttttgtt
    17581 ttaaaacctt ctaaaagcac ttcaatttga tgtgtatttt ttaaaatttg ggctacatgc
    17641 tcactttgcc aaagagctaa ttgacttttt cttgttgcga taataagctt cattttctat
    17701 cctctataat ttcaacatca ataatttctt cattagaatt ttgatactct tgcttggtgt
    17761 attgatattt tgatttagtt attaatttca aagcaatacc aaagaaaaat acaaaaattc
    17821 caaaaacact tgtaataatc cctggaaaaa taagtaaaaa ccctgcaata acaaaagaaa
    17881 attgtgttaa catatccttt aagccgccca tttgaaattc aagcatattt ttccaaaaaa
    17941 ttcccaataa aaccgcacca aaaatcatac tcaaaagtat gaaaaataaa aaattaccaa
    18001 aaccaaaaaa cactataaaa agtatacttg caataatttc aagtacaaat aaagggctta
    18061 aacttaattt ataattcata acactttctt tttaagaatt tccataagtt catcagtttt
    18121 tataagttct tttatcaaac cttctctttg gataaactct atttcattat tttctaatcc
    18181 tttaccaata actaatgcat aaggaaaacc cataagttca aaatcattca ttttaacccc
    18241 aaaacgctca tttctatcat caagcaatac ttctaatcca agattagtta aatcctcata
    18301 aagcttatta gcaaattcta aagccttttc atctttgaga tttgaaataa taatttcaag
    18361 cacaaaagga gctaaagttt tattccaaat acatcctttt tcatcatgat ttgcttcaat
    18421 agctacagcc aataagcgtg aaacacctat accgtaacat cccatgtaaa aaggctggct
    18481 tttgccattt tcatctaaaa aatttgcatt catcgcttta gaatattttt gtccgagttt
    18541 aaaaatatgc cctacttcta tacctttgct ttgttttaat tttgctccac atttagcaca
    18601 gcaatcccct tccttaactt caatcaaatc tttaaaacga tctttgttta aatttacaac
    18661 atcaatgccg attaaatgat aatctttttc attcgcaccc ataatcatct gcttttcgtt
    18721 ttcaagctca aaatctatat aaaaatctac atcttttaat cccacaaaac ctataaaacc
    18781 agctaccaaa ccagcttttt ctaattcttc ttcgctcgca tcgactagtt caagggcact
    18841 acaagcattt tgagccttga tttcttgtaa atcatcactt cctcttataa aaaacacaac
    18901 taatttgctt tcattttcgt aaatagcttt ttttaccact gctttaatcg tataaaaagc
    18961 attgatttta aaaaattgtg ctaaagaatc tatagtttta atatttggag tgtgaaattt
    19021 actcgcataa tttgcttcag gacgctcatc ttgacaagtt tttttagctc tttttgcagc
    19081 ttcaacatta gccgcataat cacaattttc acaaattaaa atatcatctt ctccattttt
    19141 tgctaaaacc ataaattcct tagaaccact tccaccaata gccccactat cagcttcaac
    19201 tgctctaaaa tcaagcccca ttctttgtaa aatttgagaa taagttttat acataagctc
    19261 aaactcacgc cctaaatctt cttcattagc atgaaaactg tatccatctt tcattagaaa
    19321 ttcacgacat cttaaaagcc caaatctagg ccttgcttca tcacgaaatt taagtccaat
    19381 ttgatataaa tgcaaaggaa gttgtttata gcttgtgatt ttgtttttta ccaaagaaag
    19441 catagcttct tcatgtgttg gacctaaaac aaattcattt tcttttctgt ctttaaaacg
    19501 caaaagttct tttccaaaaa cattataacg cccactttct tgccacaaac ttgcaggagt
    19561 gataaaacta agatttactt cttgtgctcc agccttatcc atttcttctt taactatatt
    19621 tttaatctta tctaaaactc tttttcccaa aggcaagaaa ttataaagtc cactgccaat
    19681 ttgttctaca aaacccgcac gcgttaaaaa aatatgacta ggcaaactcg catcttttgg
    19741 tgcttctttt aaacttggtg cataaaattt agtaaatctc atcattattc tccatatcaa
    19801 attcacattt atattgattt aaaccttcaa gattattttg taaatcaaaa acataacgca
    19861 tagcattaat cactgtatcg ctttgcattt taccttgtaa atgtttcaaa ttcacagtag
    19921 gtgtgtgtaa aaaagcctta aaaacttgat gaatcaactt tctagcctct tctttatcag
    19981 attttttcaa atatcctttt tttaacgcaa tttcaagttg tttatctgca tattctttag
    20041 cttgcaagcg tatggctttg ataataggca tcaaagccaa atcgtttaaa tacctaaaaa
    20101 attcacttgt ttcacgacct attatcccat aagccatacg agcttcttgt tctcttagtg
    20161 ctaaattttt ttgaaccaca atctcaagat catctacggc aaaaacagat atattttcat
    20221 tttcattgat atcaatatcc cttggaactg caatatcaaa aaaatacctt ttataaggaa
    20281 gttcttctat tagagaattt gtaataatag catttggtgc attagtagct gagaaaaaaa
    20341 actcgtattg atttaaatat ttttttaaat tttctaaact atcatattcg cttaaaacac
    20401 caagtctctc acacaaatct ttagcttttt gtaaatcacg atttaaaata atcactttag
    20461 cacccgcagc aattaaatgt tttgccgcaa gttctcccat ctctccagct ccaataacaa
    20521 cagctttttt ttgcgttaaa tctgcaagtt cttttgcttt tgccacggca acactagcta
    20581 cagagatagg atttttagaa atttgagttt cattgcgtac cttagcagca catttaaaag
    20641 cactatgtac tgctcttgaa agatgtactc cgcaaaaatt attttttact gcaaaagcaa
    20701 aggcatcttt taattgccct gctatctgag tttctccaac caccaaacta tccaaagaac
    20761 ttgctacaga aaaaagatgg tggattgctc cactatcttc aaaaatatca gctttttcaa
    20821 gtaaaatatc tttatcaaca tcacaaagta aagccaaaga tttaacaata aactccgcac
    20881 aggccatttt tacaaaagca acaatttcaa cacgattgca agtacttata accaaacatt
    20941 cttcaatatt ttcatgagtg ctaatgattt ttaaaaactc acttttttta gcttcattgg
    21001 aaaagcttaa cttttccctt aaggcaatat ctgtattttt atgagtaaaa gatatacaat
    21061 aatacattaa aattccctat ctatcatagc tttaataata tcattaagct tattattatc
    21121 atatttttca attgcttttc tagccttttt tgcataagtt ttagcttcta aaatagcttt
    21181 ttctaaagct ttttgttctt caaatttagt ttttagccat tctttttcat tttcatttaa
    21241 atctttttta aataaagtct gcaaatatat cctatcttgt tcttgtaaat tttcataaag
    21301 ataaatataa ggtaaggtag ttttaccctc tttaaaatca ttcatagcag gttttccaag
    21361 aattttttca tcactcttaa tatctaaaat atcatcaatc atctgaaaag caagtcctaa
    21421 atttttacca tattctgcaa aatctttttc atataatcca gccaaaatag ctccgcatct
    21481 agcacttgct tcaatcaaaa cagctgtttt attatagatc attttcaaat aagcttcttt
    21541 attgatatta aatttctctc ccaaatcaac atccataagt tcgcctatag caagctttac
    21601 aacagcatct gaaataatac ttgcaaatct agcatccatt ttgcttaatt cataaaaggc
    21661 ttttgaatac aaaatatcgc ccaacataag agcatttttt gtaccaaatt cagcattaac
    21721 agatcttgct ccacgcctta attcactctc atcgataata tcatcatgta ataaactagc
    21781 aagatgtatc aattctatag ctgcgcaaat tttaaaagca atctcactct catctgcgat
    21841 agctaataat aatttagagc gtaatttctt tcctgatttt acatttgaaa gcatatttaa
    21901 aataggttca tagccaagtt cttctaaaaa ctgttttatt aattcatcta ttttttgcac
    21961 tatcttttcc ttgttaattg ctattattat tttctttgct tgttaatggt tttacctgag
    22021 gttcgttaaa attaatcata ggaacaacct gattattttg cggtggattt tgtaaagctt
    22081 tttttctcgg atctaaaaat tctaccatta agcgagattc cttatcttct atataaaccg
    22141 taaaagttgc taaaccttta ttataaccac taaattctaa aataagtctt gctctatcaa
    22201 tgtgtggatt ggtataatca ggtattaaag tttgagttac ccaatctaaa tttcttctta
    22261 aactcatcac aaattgacgc ggatatttgc gaaatttcga atgtacgatg atattagtat
    22321 tatcaaacaa agtccaataa aaatcaaaat tttgcacctt atcttcatag cctatttctt
    22381 taatctgcac actagctctc tcatcttttt taagtataaa tttataagta taatcaaaag
    22441 ttggttcaga tgctaaaaca ttactaaaaa taaaaaaaat acaaattaaa taggggctta
    22501 ttttaaacaa ttttagcctt cgtgtcctaa aatttttgcg cccaattcta tataaatatc
    22561 attttgcctt tcttctatga aatcaccatt ttctaatatg aaatttttta catccatttc
    22621 tgttagacct tgtttttcca aaagttccac catagcaata tgatcagcaa aaaattcctc
    22681 aaaaactttt tctaaggctc ctaaatttcc attttgtata atttcta
//
LOCUS       DAPIWB010000025        22453 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.026, whole genome shotgun sequence.
ACCESSION   DAPIWB010000025 DAPIWB010000000
VERSION     DAPIWB010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22453)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22453)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22453
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.026"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            22..1398
                     /locus_tag="RJ266_000770"
     CDS             22..1398
                     /locus_tag="RJ266_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDV7354537.1"
                     /translation="MQQEYYDLDLERAILSSCIMSEEAYASIAGDISPKDFSLKAHQD
                     IFKAVIACSNNKEPISVSFLRKHKKIDEQILAEILATPSMIDLPAYVNELHEKSVKRQ
                     LLSFAHLLPTRINEDRAVSEIADEIGKEIFSITNRVNSRDIKDVDMVISELFEEFKKQ
                     KTLENKGIIGLDTGFEGLNKMTKGFKGGELIIIAARPGMGKTTLCLNFIDKVLRQKKG
                     VALFSLEMPATQIMQRMLSSKTSIPLQKILTADLNDDEWERLGDACNDYSQKKLYIYD
                     SGYATIADVRAILRRLKSQDESIGLCVIDYIGLMMSNSNFNDRHLQVSEISRGLKLLA
                     RELDMPIIALSQLNRGLEQRANKRPLMSDLRESGAIEQDADAILFVYRDEVYREQEEK
                     ERENKAKAEGKAYQRLFIPNPMQENAEIIVGKNRNGPVGTIEVVFLKEKSCFVDKPIG
                     YETTEFTG"
     gene            1503..2063
                     /locus_tag="RJ266_000771"
     CDS             1503..2063
                     /locus_tag="RJ266_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354538.1"
                     /translation="MLKQIAFGSIALTATGYGIKKLYEKLSKPERKFDTHAIVPSCKD
                     MINTEEYKLKRELEIEQKKNQIQEFLCECMECYSGFSKYFNSKEFLEFEQNFTSKNNH
                     KTEFLLSSYKDQMIKVIDHAKKFECLSAFLETQSEKNDLAVVKMISESMERKTQRFYL
                     QTKFQTFPQYIFPSVWSSPMWNKQWE"
     gene            2054..2260
                     /locus_tag="RJ266_000772"
     CDS             2054..2260
                     /locus_tag="RJ266_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354539.1"
                     /translation="MGIMLGILSLIAGFVAIVLMCSLYFIAFMVFVGIAILIFLSMQP
                     YPYNIIFCAIYLITILALVLWRKT"
     gene            2339..3066
                     /locus_tag="RJ266_000773"
                     /pseudo
     CDS             2339..3066
                     /locus_tag="RJ266_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000323697.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3944 domain-containing protein"
     gene            3085..3582
                     /locus_tag="RJ266_000774"
                     /pseudo
     CDS             3085..3582
                     /locus_tag="RJ266_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108589.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            4087..4551
                     /locus_tag="RJ266_000775"
     CDS             4087..4551
                     /locus_tag="RJ266_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354540.1"
                     /translation="MSVSIMELLGFGELIKLPLIDSSKKYHNKNKQQLRLFIIQEILK
                     ENQKTITQIIDIINNLIEQCNTNTQNLQELIKLLKLASKNNETFKEREKLLYCPEMLS
                     LITINNHLKEDDIQFIEQYYTYNQNTHEYERNDNLSSSDLEKLSNFFKLKNL"
     gene            4876..5157
                     /locus_tag="RJ266_000776"
     CDS             4876..5157
                     /locus_tag="RJ266_000776"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354541.1"
                     /translation="MITYSNLSDVKKRIEDEFTHRNAECDKYDYLIAITCGAIAGIMD
                     IFLVGNPKDSYLGKKVDKTVEKMTQKFAQLCGWDKQKALDKNKDLTKSV"
     gene            5163..6032
                     /locus_tag="RJ266_000777"
     CDS             5163..6032
                     /locus_tag="RJ266_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354542.1"
                     /translation="MENKFKINYDQTTTNGRNGTNGKVDNLSMKNHHLKSIGHSPDIF
                     GLFVSIVNQFTNTSTFVSNGKIITIDTNTFELQGGNFIAKIFCGFFNWFGHLASDWCG
                     SSGGKERGAGIPMPFYNLFLLCDFGNFGQHRQTLAQIATQVFEQGYDLRHGVTMSIPV
                     MINEMLIRFMYIIKAKFYHKKEWKECIPKDDIPELNKMLLIGSGTFLLIDTGGAWIKS
                     KNPITNPVVFLSEINLINVIRFSTLILKEIYILYNNGKIDNKKLEKYLDDTCKILLIE
                     AHNKSKPFKEILK"
     gene            6041..7108
                     /locus_tag="RJ266_000778"
     CDS             6041..7108
                     /locus_tag="RJ266_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7354543.1"
                     /translation="MNHLLILYNPYYQEDVIKQHLSILQEKSQVAFGKIKSKLNDQEK
                     QNSLEEIYQSTNEENFLQLFLSDYANLFVAKVVKISKNVDESLIPSYYKEKNLEVEDF
                     FIISDLRELVREDFSRLRDKFLANFITPNDHTYAIYGNNYTYPLPVRLKEECSYFLGD
                     EKHYLSVYKSKEYLAMQENFIRFVFGKRIFYLLHSDSISNIIHAELELLQSENDLLND
                     FTSIIVKYSKTLEYEIYAFAKKVLLKACMKDPSLYDLAYNVQGKSFILKDFFTQKPNL
                     GSIKFLLRHENIQCHLGKSLTQFINYPFSKSLTIIQEIRNEAVHAKAPSLNEVKKLRN
                     EILGIEGVSLLKSILTHKEIS"
     gene            7105..7977
                     /locus_tag="RJ266_000779"
     CDS             7105..7977
                     /locus_tag="RJ266_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HDV7354544.1"
                     /translation="MKEYDKLSIRLVQILSKFNNGESLSAQELAQEFNVDTRTIQRDL
                     NERLAFMPIKKENGRYVLESFALGKLSFKDIQNFATLSGIAELYPKLDQGFIVDLLSH
                     RVNKVLMVKNEGFQKVDYELFKDLSVAILKHNVLNFFYKDKERQIKPYKLVNYKGIWY
                     LLGDENDKLKHFNLDKISKLHTKNENFIPDEKLEEQIQNDPNIWLGESKEVILKLDKN
                     AKEYFFRKEILSNYQIIDKDETSYTLSTQVSYEDEILHLVKQWIPYIKILAPIELKIR
                     LEDILKSYLNNLSK"
     gene            complement(7999..8074)
                     /locus_tag="RJ266_000780"
     tRNA            complement(7999..8074)
                     /locus_tag="RJ266_000780"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8039..8041),aa:Met,seq:cat)
     gene            complement(8108..8182)
                     /locus_tag="RJ266_000781"
     tRNA            complement(8108..8182)
                     /locus_tag="RJ266_000781"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8148..8150),aa:Gln,seq:ttg)
     gene            8275..9294
                     /locus_tag="RJ266_000782"
     CDS             8275..9294
                     /locus_tag="RJ266_000782"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3,4-dihydroxy-2-butanone
                     4-phosphate synthase/GTP cyclohydrolase II"
                     /protein_id="HDV7354545.1"
                     /translation="MKFVSVEQAIKDLQAGKMLVMVDAEDRENEGDLIFPAQFSTQEK
                     VNFMIKEARGVVCVALDETLAKKFELPLMVPKNTSNHETAFTITVDAKDATTGVSAYE
                     RNMTIQIFADDNAKASDFVRPGHINPLIAKKGGVLERTGHTEGTVDLCKLAGLKGACV
                     ICEIVKDNGDMARREDLEIFCQKHDLNMIAVSDLIEYRLKHESLIKLEEKSQSVLAGF
                     KAEKFIFSDHNQTQHIAFCFKDIKKCENVKFHISGSDFELLTSDKFSKLLEQIKFLSE
                     NGGVIVFMQGEKSSTTQYKNYGIGAQILRYFGIEEIKLLSQSCDKDYIGLEGFGLNLK
                     ACNFN"
     gene            9306..9749
                     /locus_tag="RJ266_000783"
     CDS             9306..9749
                     /locus_tag="RJ266_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HDV7354546.1"
                     /translation="MTLKEQILNDIKEAMKQKDDFKRDSLRTLNAAFKQIEVDERIEL
                     DNERIYKIIASEIKKRKDAIELYLKANREDLAQKEQNEISLFEIYLPKQLSDEELTLA
                     LKQLIEELGVSSLKEQGLVMKEAKIKLGASVDGKRLNLALKELLQ"
     gene            9767..11467
                     /locus_tag="RJ266_000784"
     CDS             9767..11467
                     /locus_tag="RJ266_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HDV7354547.1"
                     /translation="MKELSGSAMICEALKEENVKIVFGYPGGAALNIYDEIYNQKYFK
                     HILVRHEQAALHAADAYARMSGEVGVAIVTSGPGFTNTITGLATAYSDSIPLVLISGQ
                     VANSLIGTDAFQEIDAVGISRPCVKHNYLVTCIEEFPRILKEAFYIARSGRPGPVHID
                     VPKDVSATLGLWECSKEISMKTYKPVYKGNSKQIKKFAELLKEAKRPLFYLGGGCISS
                     NASEQIRELIKFTKIPVVETLMALGTLRSDDVFNLKMAGMHGSYAANMALSECDLLVS
                     VGARFDDRITGKTSEFAKHATIVHVDIDPSSISKIINAHYPIVGDIKEVLKEFLEELK
                     KENFNTTFKEWHETLKRYNELYPLSYEDSNEILKPQWVIEECAKMAPDARIITDVGQH
                     QMWVAQFYPFNYPRQLATSGGQGTMGYSLPAALGAKLAVGEEVVINFVGDGSVLMNIQ
                     ELMTAYEYGIKTINIILNNAFLGMVRQWQSMFYKEHFSQTDLSTQPDFVKIAQGFGCE
                     GYEISSKEEFIQAFSQALKSDKTSLLNVKIDRFEDVLPMVPAGGAIYNMILPKAKDRQ
                     "
     gene            11464..11928
                     /gene="ilvN"
                     /locus_tag="RJ266_000785"
     CDS             11464..11928
                     /gene="ilvN"
                     /locus_tag="RJ266_000785"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HDV7354548.1"
                     /translation="MRRVLSVIVLNEHGVLSRIVGLFSGRGYNIDSLTVAPLENKEFS
                     RINIVTSGNERTFEQIVKQLHKLIPTYKVIESEEFIDKEMALVKIPLNENLGGLDAVL
                     KAYNGTIANSNENFLFLMVADDANRIDNFLKTIKKYNPSDIVRSGSVLMEIK"
     gene            11925..12890
                     /gene="lpxD"
                     /locus_tag="RJ266_000786"
     CDS             11925..12890
                     /gene="lpxD"
                     /locus_tag="RJ266_000786"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HDV7354549.1"
                     /translation="MKLSEIVEFLSLEYKGEDIEISALNSLLKANFTELTYCDGEKNT
                     KDIPHTGAAAILVSKEYENLVPKDTKALITQSPHLSFAFLSKLFAKPLISTAKEKVQN
                     IAKSARIMPNVYIGDNVNIGENVIIMAGAYIGDNVSIGDESIIHPNVVIYNDTKIGKK
                     CHLLANCVIGSDGFGYAHNKNGEHYKIYHNGNVVLEDFVEVGACTTIDRAVFDSTIIK
                     AGTKVDNLVQIGHNCNIGQNCIIVAQTGISGSSELGRNVIMGGQSATSGHLKIGDFST
                     IAARGGVSKNLEGGRVYGGFPIMLQKDWLKLQAKIAINFKEKSQD"
     gene            complement(12879..13907)
                     /gene="queA"
                     /locus_tag="RJ266_000787"
     CDS             complement(12879..13907)
                     /gene="queA"
                     /locus_tag="RJ266_000787"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HDV7354550.1"
                     /translation="MNKDLLLSSYDYTLANELIANYPINPKEDARLLVFDRKNKEIFH
                     TTFKNLHDFLPNCAIFFNDTKVIKARIYGNKASGGKIELFLHQPFLNSHNPLFLAQIK
                     GRVKKDEILYFKEDLKARVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPP
                     YIKREDEKSDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKHEIYHLTLHVGAG
                     TFKSVECENIQEHKIHSEFFNIPQQACEIIDSKQAILGVGTTVTRTIEYYTRTKTKNG
                     FCDLFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYS
                     YGDAMLIL"
     gene            complement(13900..14637)
                     /gene="tatC"
                     /locus_tag="RJ266_000788"
     CDS             complement(13900..14637)
                     /gene="tatC"
                     /locus_tag="RJ266_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HDV7354551.1"
                     /translation="MFEELRPHLIELRKRLFISVACIVVMFIVCFALRSYILDILKAP
                     LIAVLPEVAKHVNVIEVQEALFTAMKVSFFAAFIFSLPVIFWQFWKFVAPGLYDNEKR
                     LVVPFVSFASIMFALGACFCYFVVVPLAFKFLINFGLNEDFNPVITIGTYVDFFTKVV
                     VAFGLAFEMPVIAFFFAKVGLIDDSFLKRHFRIAVLVIFVFSAFMTPPDVLSQFLMAG
                     PLCGLYGLSILIVQKVNPVPKDKESNE"
     gene            complement(14630..15046)
                     /gene="tatB"
                     /locus_tag="RJ266_000789"
     CDS             complement(14630..15046)
                     /gene="tatB"
                     /locus_tag="RJ266_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HDV7354552.1"
                     /translation="MSFGEIIVILVVAILVLGPDKLPEAIVQIAKILKAVKRNIDDAK
                     SSIEKEIRINDLKEEAKKYKDEFSSTNENIRKKLSFEEFDDLKRDILDKTKVDLTFDS
                     RDDKVKNNLSGQNLNTEEKPNLSKLETQDKNGKINV"
     gene            complement(15105..16172)
                     /locus_tag="RJ266_000790"
     CDS             complement(15105..16172)
                     /locus_tag="RJ266_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HDV7354553.1"
                     /translation="MHFYIHIPFCESKCNYCAFTSLKKNDYEKAYFKALKEDIVFQLK
                     QFNIQSNQIKTLFIGGGTPSCVNAYNYEDIFKILYPLLDKNVEISCEANPNSATLNWL
                     KNMKNLGVNRISFGVQSFHPKKLHFLGRIHNQEMIIKTLENANKVGFKNINLDLIYDT
                     KLDNKKMLEFELLHLKQIKDLITHLSAYNLTIESNTAFAKKEHFKKNAPNLMKFFIKQ
                     LLELDFFQYEISNFSKTKAQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKN
                     YIENPTFRSIEQLSSKDLNLEHLFLGLRSIVGIDETKLNQWQKDKINILLKEKKLFYK
                     NKRYFNPNFLISDELALYLSS"
     gene            16273..16743
                     /locus_tag="RJ266_000791"
     CDS             16273..16743
                     /locus_tag="RJ266_000791"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HDV7354554.1"
                     /translation="MENEKNYRPNVAAIVLSSSYPFECKIFIARRSDMDNIWQFPQGG
                     IDKGESVKNALFRELKEEIGTDEVEIIAEYPEWLSYDFPSKIVKKMYPYDGQIQKYFL
                     VRLKHGVTININTKHPEFDDYQFVSVKQIFEMINHFKKNIYVKVIKYFEKKGYI"
     gene            16745..17947
                     /locus_tag="RJ266_000792"
     CDS             16745..17947
                     /locus_tag="RJ266_000792"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HDV7354555.1"
                     /translation="MLIVQKYGGTSVGTLERIEAVANRVIQSAQQGNQLVVVVSAMSG
                     VTNTLIEQAEYFSKTPNGKDMDMLLSSGERVTSALLSIALNEKGCPAISFSGRKAGII
                     TDSVFTKARIHHIDTKAIKSELQNGKIVVIAGFQGVDEEGNVTTLGRGGSDLSAVAVA
                     GALNADLCEIYTDVDGVYTTDPRIEPKAKKLDKISYEEMLELASLGAKVLQNRSVELA
                     KKLNVNLVTRSSFNNNEGTMITKEDGMEQALVSGIALDKNQARVTLRNVEDKPGIAAE
                     IFSVLANENINVDMIIQNVGVDGATNLGFTVPQNELELAKNAMQKILSSKTTIESDSA
                     VVKVSIVGVGMKSHSGVASKAFKALADEGINIGMISTSEIKISMIVHEKYGELAVRAL
                     HECYGLDK"
     gene            17948..18484
                     /locus_tag="RJ266_000793"
     CDS             17948..18484
                     /locus_tag="RJ266_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HobA family DNA replication regulator"
                     /protein_id="HDV7354556.1"
                     /translation="MSDFLSFTLENIRNGGAFMAWLESRRLEWAPLMAARLKYLLEGR
                     TFVLMCDEQRSWYEEYFLKNINSKATRPMLPFVSLNSLCKKKVQSSEDIALLNDLLDI
                     SFPNGYVYFYIGSASDNKSLIAKSRDDSLLWLFDEQLQDSFYLNSKDKDLDIKLISLY
                     QLFDVSLDAILFSKVQLG"
     gene            18490..19089
                     /locus_tag="RJ266_000794"
     CDS             18490..19089
                     /locus_tag="RJ266_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HDV7354557.1"
                     /translation="MFISKIIISEDFLGIKEEMINNFGIKKLRFFIPQNEFLLDDARA
                     VEKESYIAETEEKIIVLMADSYRIEAQNFLLKLLEEPPKNIKFLIVVPSKNLLLPTIK
                     SRLICEKRKVEKEVKKLDLDLKRMDLRMLFDFLQKNENLDKNELMDQIALLAKECVKY
                     KDFNAEELEFFYESYELAKLNSKSGVLLATLLLNYYTKK"
     gene            19091..20233
                     /gene="folP"
                     /locus_tag="RJ266_000795"
     CDS             19091..20233
                     /gene="folP"
                     /locus_tag="RJ266_000795"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HDV7354558.1"
                     /translation="MKFFKINPNTDFNLLCSFINPHKMGQKIMSEKTKTHFIFIKDIS
                     TPAANILKQDALRVGAELITHKEVITAKITHSNALLMASKEQIQKLIVKEKLQDFGLK
                     NLALFLQKDFLKPKKAELMAVINVNEDSFNAKSRASEEDFEKRLNDFLALKPEYIDIG
                     AVSSRPGSEYCGKEEEFKRLKKVLDLIYEKNYYEQAIFSLDSFDEYCLEYALNKGFKL
                     INDITSLRNLNLAKLASKYEAKYCLMHMQNNPNNMQDNPFYEDLLDEMTLFFKEKLEL
                     LESFGVKESILDVGIGFGKSAGHNMILIKHLEHFLQFNKPLLIGASRKSVINAYFQSE
                     IKDRLAATLYLHLKAFENGASIIRVHDLYEHKQLFALAQAMDNIGV"
     gene            20234..22177
                     /gene="ligA"
                     /locus_tag="RJ266_000796"
     CDS             20234..22177
                     /gene="ligA"
                     /locus_tag="RJ266_000796"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HDV7354559.1"
                     /translation="MKKEEYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELSVFE
                     EQNKDEISKDSPTQKIAPIIQSEFKKIAHLRRMWSMEDVFDESELRAWAKRAKCEKNF
                     FIEPKFDGASLNLLYENGKLASGATRGDGEVGEDITLNVFEIENIPKNIAYKERIEIR
                     GEVVILKDDFEKINEKRALLNQSLFANPRNAASGSLRQLDTSITKERNLKFYPWGVGE
                     NTLNFTKHSEVMQFIRELGFLKDDFVRLCTNLDEVLKAYDELLALREKKPMMMDGMVV
                     RVDDLALCEELGYTVKFPKFMAAFKFPALEKTTRLIGVNLQVGRSGVITPVAVLEPVN
                     LDGVVVKSATLHNFDEIARLDVKINDFVSVIRSGDVIPKITKVFKERREGLEMEISRP
                     KLCPTCQSELLDEGTLIKCQNIDCEDRLVNSIIHFVSKKCLNIDGLGENIVELLYKHK
                     KITTLESIFHLKFSDFEGLEGFKEKKINNLLNAIEQARECELFRFITALGIEHIGEVA
                     AKKLSLSFGKEWHKQSFEAYANLEGFGEQMALSLCEFTRVNHTRIDEFYKLLNLKIEK
                     LEIKSDGVIFGKTFVITGTLSRPRDEFKALIEKLGGKVSGSVSKKTDYVLFGEEAGSK
                     LSKAKELEVKCIDESAFNELVKE"
     gene            22158..>22453
                     /locus_tag="RJ266_000797"
     CDS             22158..>22453
                     /locus_tag="RJ266_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354560.1"
                     /translation="MSLLKNSSYILTLLSLFGFLLTWQRSAFSLFFLISIFLTLFWEF
                     FLFLKLRKNIIKEATLIKGSLFYRVSMGDFYLYIFSFFLAIFGLVSLFLNFLNL"
BASE COUNT         8281 a         2854 c         3962 g         7356 t
ORIGIN      
        1 ttatatttat aaggaaattt agtgcagcaa gagtattatg acttggattt agaacgagct
       61 attttaagca gttgtatcat gagtgaagaa gcttatgcta gtatagcagg tgatattagc
      121 ccaaaagatt ttagtcttaa agctcaccaa gatattttta aagcggttat agcttgtagt
      181 aataacaaag agcccatttc tgtaagtttt ttaagaaaac ataaaaaaat agatgagcaa
      241 attttagcag aaattcttgc cactccttct atgatagatt tgcctgctta tgtaaatgaa
      301 cttcacgaaa agtccgtaaa aagacaactc ttgagttttg cacatctttt gccaactcgt
      361 atcaatgaag atcgtgctgt aagtgaaatc gcagatgaaa ttggtaaaga aatttttagc
      421 attacaaatc gtgtgaattc tagagatatt aaagatgttg atatggtaat atcagaactt
      481 tttgaagaat ttaaaaagca aaaaacttta gaaaataaag gtattatagg gcttgataca
      541 ggttttgaag gtctaaataa aatgacaaaa ggctttaaag ggggtgaact tataataatc
      601 gccgcgcgtc caggtatggg aaagacaact ctttgtttaa atttcattga taaggtttta
      661 agacaaaaaa aaggcgtggc tttattttct cttgaaatgc ctgcaactca aatcatgcaa
      721 agaatgctat cttctaaaac ttctattcct ttgcaaaaaa ttttaactgc agatttaaac
      781 gatgatgaat gggagcgttt aggagatgct tgcaatgatt atagtcaaaa gaaattatat
      841 atttacgata gtggttatgc aactattgct gatgtaaggg ctattttaag gcgtttaaaa
      901 tctcaagatg aaagtatagg actttgtgtg attgactata tagggcttat gatgagtaat
      961 tcaaatttta atgatagaca tttgcaagtt agtgaaattt caagaggact taagcttttg
     1021 gctagggagc ttgatatgcc tattatcgca ctttcacaac ttaatcgtgg cttagagcaa
     1081 agggcaaata agcgtccttt gatgagtgat ttgcgagaaa gtggagctat agagcaagat
     1141 gcggatgcta ttttgtttgt atatcgcgat gaggtttata gagaacaaga agaaaaagaa
     1201 agagaaaata aagctaaagc tgaaggcaaa gcttatcaaa ggctttttat accaaatcct
     1261 atgcaagaaa atgctgaaat tattgttgga aaaaatagaa atggacctgt tggaactata
     1321 gaagttgtat ttttaaaaga aaaatcttgt tttgtagata aacctatagg ctatgaaact
     1381 actgaattta caggctagct ttaataaaat aagtttttaa tattttaaag ttatttttta
     1441 cgacacaacc tgtcgcaagg gtattttata ctttctttgt tattttaaaa caaggagaga
     1501 aaatgttaaa acaaatcgca tttggtagta tagctcttac agctacagga tatggcataa
     1561 aaaaattata cgaaaaatta tccaagccag aaagaaaatt tgatacacat gctattgttc
     1621 caagctgtaa agatatgatc aataccgaag aatacaaact caaaagagag cttgaaatcg
     1681 aacaaaagaa aaatcaaatt caagaatttc tttgcgaatg tatggagtgt tatagcggct
     1741 tttcaaaata ttttaattct aaggaatttt tagaatttga gcaaaatttt acctctaaaa
     1801 ataatcataa aacagaattt cttttgtcgt cttataaaga tcaaatgata aaagtgatcg
     1861 accatgctaa aaaatttgaa tgcttaagtg cttttttgga aacacaaagc gaaaaaaatg
     1921 acttagcggt tgtaaaaatg ataagcgaaa gcatggagag aaaaacacag agattttatc
     1981 tgcaaacaaa atttcaaact tttcctcagt atatttttcc ttctgtgtgg agttctccta
     2041 tgtggaataa acaatgggaa taatgcttgg aattttaagc cttatagctg gctttgttgc
     2101 catagtgttg atgtgtagtt tgtattttat agcgtttatg gtttttgttg gcatagcgat
     2161 acttattttt ctttctatgc aaccttatcc ttataatata atattttgtg ctatatattt
     2221 aatcacaatt ttagcgctag tgctatggcg taaaacttaa aaatttcact tctcccttga
     2281 ctggggggag ggatttgata aaatacaaag ttaaaaattt taaaaacaag gagaaaatat
     2341 ggcctacaga tatgataaag atttagaatt cttaaaagaa ttaagcagtc cagaactcga
     2401 tgagcttgta aaaattttaa cccatgataa agacgggaaa gttcgtttta ctgaagagtt
     2461 aaccaataat gatctttata aaaaacatta tccagatcat aaagaatata tcgaactcat
     2521 tttagaagaa tttcaaaaat ttggaggaaa tagtattctt aatatatttc gaggtggtgg
     2581 agttttatat aatgaaattc tacgcgatgt tgcaaaaaaa tttgatgtaa aatttgatga
     2641 aaatgaaagc acaaactcca tagaaacatc acttttatgc aaattaatag aagaagagtt
     2701 aaaaaattct caagatgaaa atacattaag agaacttgta aatattttcg aacttggcat
     2761 ttctaatatt aataaacaaa cagttgtaat gggattgcaa tctcttatta aaataggtgg
     2821 atttaaaagc tatcaaattg cagtaatagt tgcaaatcaa gttatgaagt tttactagga
     2881 agaggtttat ctcttgcggc aaatgcaaca cttacaagag ctttaagtct tttttctggt
     2941 ccggtaggtt ggacaattat gaccacatgg actgcattgg atttagctag cccagcctat
     3001 agggttacta taccagcagt acttcaaatt ataattttaa gactaaaaca caatacaaaa
     3061 aactaaacac aaggaaatgc attaatggaa aatatttgcc aatttatcat agaaaatatt
     3121 gataaaaatt cattaaatac aaaaaaaata aaacttgttt tcaatatgca agagcaagaa
     3181 attacaacaa tttcgaagat atttaaggta tcttcggaac acattattgc tttttatgat
     3241 acctcaacat cctttaatta ttttagcaaa actaccggaa tatgttttac tggcaaagaa
     3301 gttatcttta aaagaaaaga agatgaagtt ttaatgaaaa tcaactatga agatttcaaa
     3361 gaggcaaata aatccttacc tgaaaaaaca acaactcttc aagacatcaa atttcccata
     3421 tcttttcata atcttggaac atcttatctt tcatttgatg atttcaaaaa gaaaaactac
     3481 atagaagaaa atgatgagct tataataaat tttttacaca tcttaacttc aaaaaataac
     3541 atagaaagtt ttaaaaatga aagtatgttt ccacaagcct tagaaaaaac aaacgaaagt
     3601 attaaagaaa actatataaa agttatcatt aaaataatat tagatcaata cggtttttta
     3661 gatgaaaaaa gattaatcaa aatttttgct ctaatgaata aaattaatgt tgcttcagaa
     3721 acaaggtata aaatacaaga ttttttacat aataaacatt ctagttttga agatttgcta
     3781 aacatcataa aacaagaatc tagatttatg caattcaaat atattttaat ttcactaata
     3841 aaagacttaa ttgatataga ttttgaagat aataaaattt ataatttttt gtatgaaaac
     3901 aaagacattt ttaaaatcaa agaccttaaa gaaatctatt agataaaaga aatcattaaa
     3961 aaagaatatc aaataatatt agacgataat aaagaaattc agcaaatttt taactttata
     4021 ttcgaaacag ctacaaaaaa taatatatca ttaaacggtt tatatctttc aggaatgaca
     4081 attggcatgt ctgtatcaat tatggagtta ctaggatttg gggaattaat aaaattacca
     4141 ctaattgatt cttcaaaaaa atatcacaat aaaaacaaac aacaattacg tctttttatt
     4201 attcaagaaa ttctcaaaga aaatcaaaaa acaattaccc aaattattga tatcatcaat
     4261 aatttaattg agcaatgtaa tacaaataca caaaatttac aagaattaat aaaattatta
     4321 aaattggctt caaaaaataa tgaaactttt aaagaaaggg aaaaactttt atattgccca
     4381 gaaatgcttt cattgataac aataaataat catctaaaag aagatgatat tcaatttata
     4441 gaacaatact atacctataa tcaaaatact catgagtatg agcgcaatga caatctttct
     4501 tcgtcggatt tagaaaaact ttcaaatttt tttaaattaa aaaatctata aggataattt
     4561 tatggataaa atacaagaaa acaccaaaat agaaaaggct atattagccg aaaaacaaca
     4621 aatcttttta atacaaaata aattatccga aattgaaaaa aatatcaaag aataatgttt
     4681 aaccatagaa cagattcaaa atagtatcac agaaaaaaat caaaatttga gcaatataga
     4741 atataaggaa aatcaatcaa tcgattcatt ggaaattttt tttaacactt atagcaattg
     4801 ggaaacatat tgtcaaaaaa ttgaaaaata tttaaactta aaaaaataaa ctcaaatgaa
     4861 gattctttaa aatttttgat cacttattca aatttatcag atgttaaaaa aagaattgaa
     4921 gatgaattta cccatagaaa tgcagagtgc gataagtatg attatttaat agcaataaca
     4981 tgtggagcaa tagctggcat tatggacatt tttttagttg gaaatcctaa agatagctat
     5041 ctaggaaaaa aggtagataa gacggtagaa aaaatgactc aaaaatttgc acaattatgt
     5101 ggttgggata agcaaaaagc attagacaaa aacaaagatt taactaaaag tgtatagcgt
     5161 ttttggaaaa caaatttaaa attaattatg atcaaactac tacaaatgga agaaatggaa
     5221 caaatggaaa agtagataat ttaagtatga aaaatcatca tttaaaaagc ataggtcact
     5281 ctccagatat tttcgggtta tttgtatcta tagtaaatca atttaccaat acttcaactt
     5341 ttgtcagcaa cggaaaaatc ataaccatag atacaaatac ttttgaatta caagggggaa
     5401 attttattgc taaaatattt tgtggatttt ttaattggtt tggacattta gcatctgatt
     5461 ggtgtggatc tagtggaggc aaggaaagag gtgcaggcat tcctatgcct ttttataatt
     5521 tatttttact ttgtgatttt ggaaattttg gacaacatag acaaacacta gcacaaattg
     5581 caacccaagt ttttgaacaa ggatatgatc ttaggcatgg agttactatg tctattcctg
     5641 ttatgattaa tgaaatgcta attcgtttta tgtatataat aaaagctaaa ttttaccaca
     5701 aaaaagaatg gaaagaatgt ataccaaaag atgacatacc tgaattaaat aaaatgcttt
     5761 taataggatc tggtactttt ttattaattg atactggtgg tgcatggata aaaagtaaaa
     5821 atcctataac aaatccggta gttttccttt ctgaaatcaa tttaattaat gttataagat
     5881 ttagcacttt aattcttaaa gaaatttata tattatataa taatggaaaa atagataata
     5941 aaaaattaga aaaatatcta gatgacactt gtaaaatttt attaattgaa gctcataata
     6001 aatctaagcc ttttaaagaa atcctaaaat aaggcaaagc atgaaccacc ttttaatcct
     6061 ttataatccc tactatcaag aagatgtcat caagcaacat ttaagcattt tacaagagaa
     6121 atcccaagtt gcctttggca aaatcaaatc aaaactcaac gatcaagaaa agcaaaattc
     6181 cttagaagaa atttaccaaa gtacaaatga agaaaatttc ttgcaactct ttttaagcga
     6241 ttatgctaat ttatttgtcg ctaaggtggt aaaaatttct aaaaatgttg atgaaagttt
     6301 gattcctagt tattataaag aaaaaaattt agaagtggaa gactttttta ttattagtga
     6361 tttaagagaa ttggtcaggg aagattttag tcgtttaaga gataaatttt tagccaattt
     6421 catcacacca aacgatcaca cctatgctat ctatggcaat aattacacct atcctttgcc
     6481 tgtgagatta aaagaagagt gttcttattt tttaggagat gaaaagcatt atctaagtgt
     6541 gtataaaagc aaagaatacc tagccatgca agaaaatttc atacgctttg tttttggcaa
     6601 aaggattttt tatctcttac actctgatag cataagcaat atcattcatg cagaattaga
     6661 gcttttgcaa agcgaaaacg atcttttaaa tgattttaca agtattatag tcaaatactc
     6721 taaaacctta gaatatgaaa tttacgcttt tgccaaaaaa gttcttttaa aagcttgtat
     6781 gaaagatcct agcctttatg atttagctta taatgtccaa ggcaaatctt ttatacttaa
     6841 agattttttt acccaaaaac ccaatcttgg aagtattaaa tttctactca gacatgaaaa
     6901 tatccaatgt catttaggaa aaagtttaac tcaatttatc aattatcctt tttcaaaaag
     6961 tcttactatc attcaagaaa tccgtaatga agccgttcat gcgaaagccc caagtttaaa
     7021 tgaagtcaaa aaacttagaa atgaaatttt aggcatagaa ggcgtaagtt tgttaaaaag
     7081 cattttaact cacaaggaaa tttcatgaaa gaatacgaca aattaagtat acgcttggtg
     7141 cagattttat caaaatttaa caatggagaa agtctaagcg cccaagagct tgcacaagag
     7201 tttaatgtcg atacaagaac catacaaagg gatcttaacg aaagacttgc ttttatgcct
     7261 attaaaaaag aaaatggaag atatgtttta gaaagctttg ctttgggaaa attaagcttt
     7321 aaagatatac aaaatttcgc caccttaagt ggcattgctg agctttatcc aaaactcgat
     7381 caaggcttta tagttgatct tttaagccat agggtaaata aagttttgat ggtaaaaaat
     7441 gaaggttttc aaaaggtgga ttatgagctt tttaaagatc ttagtgtggc tatactcaaa
     7501 cacaatgtat taaatttttt ctataaggac aaagaacgcc aaatcaaacc ttacaaactc
     7561 gtaaattaca agggaatttg gtatctttta ggggatgaaa acgataaatt aaaacatttt
     7621 aatttagata aaatttcaaa acttcacact aaaaatgaaa attttatccc cgatgaaaaa
     7681 cttgaggaac aaatccaaaa tgatcctaat atctggcttg gagaaagcaa agaagtgatt
     7741 ttaaagcttg ataaaaatgc taaggaatat ttttttagaa aagaaatact aagcaattat
     7801 caaatcattg ataaagatga aacaagctat actttaagca ctcaagtttc ctatgaagat
     7861 gaaattttac atttggttaa acagtggatt ccttatataa aaattctagc tcctatagaa
     7921 ctgaaaatac ggctagaaga tattttaaaa agttatttaa acaatctatc taaataaaat
     7981 ttattttaaa tccttaactg gttgcgaagg ggagatttga actcccgacc ttcgggttat
     8041 gagcccgacg agctaaccac tgctctactt cgcggcatat aagatctttg aaatataaaa
     8101 taagaagtgg atggggtaaa gggattcgaa cccctgaatg acaggaccaa aacctgttgc
     8161 cttaccgctt ggcgataccc caataaatat tttttaaaag tgtgattata atgaatttta
     8221 atttatttgt caagcaattt aagttataat tttaaaaatt ttaaggaaat aaaaatgaaa
     8281 tttgttagcg tagaacaagc gattaaggat ttacaagcag gaaaaatgct tgttatggta
     8341 gatgcagaag atagagaaaa tgaaggcgat ttaatctttc ctgcgcaatt tagcactcaa
     8401 gaaaaagtaa atttcatgat aaaagaagct cgtggtgtgg tttgtgtagc cttagatgaa
     8461 actttggcaa aaaaatttga acttccttta atggtgccta aaaatacttc aaaccacgaa
     8521 actgctttta ctataaccgt agatgcaaaa gatgctacaa cgggagttag cgcctatgaa
     8581 agaaatatga ctatacaaat ttttgccgat gataatgcta aagcgagtga ttttgtaaga
     8641 ccaggacata tcaatccttt aatcgcaaaa aaaggtgggg ttttagaacg cacaggtcat
     8701 acagaaggca cggttgatct ttgtaaatta gcaggattaa aaggtgcttg tgtgatttgt
     8761 gaaattgtaa aagataatgg agatatggca agaagagaag atctagaaat tttttgccaa
     8821 aaacatgatt taaatatgat agccgtaagc gatcttatag aatatcgcct aaaacatgaa
     8881 agccttatta agcttgaaga aaaaagtcaa agtgttttag caggctttaa agcagaaaaa
     8941 tttatcttta gtgatcataa tcaaacccaa cacatagctt tttgctttaa agatatcaaa
     9001 aaatgtgaaa atgttaaatt tcatatcagt ggtagtgatt ttgagctttt aacttcagat
     9061 aaattttcaa aacttttaga gcaaatcaaa tttcttagtg aaaatggtgg cgttatagtt
     9121 ttcatgcaag gagaaaaatc cagtactact caatacaaaa actatggtat aggagcacag
     9181 attttaagat attttggtat agaagaaatt aaacttttat ctcaaagttg tgataaagac
     9241 tatataggtt tagaaggttt tggtttaaat cttaaagctt gtaattttaa ctaaaaagga
     9301 aaaaaatgac tttaaaagaa caaattttaa acgatatcaa agaggcaatg aaacaaaaag
     9361 atgattttaa aagagatagt ttaagaactc taaatgcagc ttttaagcaa atagaagtgg
     9421 atgaaagaat agagttggat aatgaaagaa tttataaaat cattgcaagt gaaatcaaaa
     9481 aacgcaaaga cgcaatcgaa ctttatctta aggcaaatcg tgaagattta gcacaaaaag
     9541 aacaaaatga aataagtctt tttgaaattt atctgcctaa acaactaagt gatgaggagt
     9601 taactttagc cttaaaacaa cttatagaag aattgggcgt aagttcacta aaagaacaag
     9661 gtttggtaat gaaagaagct aaaataaaat taggtgcgag tgttgatggc aaaagactta
     9721 atttagcact taaagagctt ttacaataat tttttggagt gttattatga aagagttaag
     9781 cggttcggca atgatttgcg aggctttaaa agaagaaaat gttaaaattg tttttggtta
     9841 tcctggaggc gctgcgctta atatttatga tgaaatttac aatcaaaagt attttaaaca
     9901 tattttagtg cgtcatgaac aagcggcttt gcatgctgct gatgcttacg caagaatgag
     9961 cggagaagtg ggcgtagcta tagttacaag cggaccaggt tttacaaata ctattacagg
    10021 tctagctacg gcttatagcg attctatccc tttggtgttg atttcagggc aggtggcaaa
    10081 ttctcttatt ggtacagatg cttttcaaga aattgatgca gtaggcattt caagaccttg
    10141 tgtaaagcat aattatttag ttacttgtat agaagagttt ccacgcattt taaaagaggc
    10201 tttttatata gcaagaagtg gtagacctgg gcctgtgcat atagatgtgc caaaagacgt
    10261 aagtgcaact ttgggacttt gggaatgctc taaagaaatt tccatgaaga cttataagcc
    10321 cgtttataag ggtaactcaa agcaaattaa aaaatttgca gagcttttaa aagaagcaaa
    10381 aagacctttg ttttacttag gtggaggttg catcagttct aatgcaagcg agcaaatcag
    10441 agagcttata aaatttacaa aaattccagt agttgaaact ttgatggcgc ttggaacttt
    10501 aagaagtgat gatgttttta atcttaaaat ggcaggcatg catggaagct atgctgctaa
    10561 tatggcttta agtgagtgtg atttgcttgt gagtgtagga gcgagatttg atgataggat
    10621 tacaggaaaa acaagtgaat ttgctaaaca tgcgactata gttcatgttg atattgatcc
    10681 tagttctatt tcaaagatta tcaatgcgca ttatcctata gtaggagata ttaaagaagt
    10741 tcttaaagag tttttagaag agcttaaaaa ggaaaatttc aacacaactt ttaaagaatg
    10801 gcatgaaact ttaaagcgtt ataatgaact ttatccgctt tcttatgaag atagcaatga
    10861 gattttaaaa ccgcaatggg tgattgaaga atgtgcgaaa atggctccag atgcaaggat
    10921 tattaccgat gtgggtcagc atcaaatgtg ggtggcacag ttttatcctt ttaattatcc
    10981 aagacaactt gcaacaagtg gagggcaagg aactatggga tattctttac ctgctgcttt
    11041 gggtgcaaag cttgccgtgg gtgaagaagt ggtgattaat ttcgtaggcg atggatcggt
    11101 tttaatgaat atccaagagc ttatgactgc ttatgagtat ggtataaaaa ctataaatat
    11161 tattttaaat aatgcctttt taggtatggt aagacaatgg caaagtatgt tttataaaga
    11221 gcatttttca caaactgatt taagcactca gcctgatttt gtcaaaattg ctcaaggttt
    11281 tggttgtgaa ggttatgaaa tttcaagcaa agaagaattc attcaagctt ttagccaagc
    11341 tttaaaaagt gataaaacct ctcttttaaa tgtaaaaatt gatcgctttg aagatgtttt
    11401 acctatggtg cctgcaggag gtgcgattta taatatgatt ttaccaaagg caaaggatag
    11461 acaatgagaa gggttttatc ggtaattgtt ttaaatgagc atggggtttt atctcgtata
    11521 gtaggacttt tttcaggaag aggttataat attgactcgc ttacagtagc acctttggaa
    11581 aataaagaat tttctcgtat taatatagtc acttcaggaa atgaaagaac ttttgagcag
    11641 atagttaaac aacttcataa gctcattcct acttataaag tgatagaaag tgaagaattt
    11701 attgacaaag aaatggcttt ggtgaaaatt cctttaaatg aaaatttagg tggacttgat
    11761 gccgttttga aagcttataa tggtactatt gcaaatagca atgagaattt tttgttttta
    11821 atggttgctg atgatgcaaa tcgcattgat aattttttaa aaacaattaa aaaatacaat
    11881 cctagtgata tagttcgcag tggatctgtt ttgatggaga ttaaatgaaa ttaagtgaaa
    11941 tagtagaatt tttaagcttg gaatataaag gtgaggatat agaaatcagt gctttaaatt
    12001 ctttattgaa agcaaatttt acagagctta cttattgtga tggtgagaaa aataccaaag
    12061 atatacctca cacaggagct gctgctattt tagtatctaa agaatatgaa aatttagtac
    12121 ctaaagatac taaagctttg attactcaaa gtccacattt gagttttgct tttttaagca
    12181 agctttttgc taaacctttg ataagcacag ctaaagaaaa agtacaaaat atcgcaaaaa
    12241 gcgcaagaat catgcctaat gtttatatag gtgataatgt aaatatcggt gaaaatgtaa
    12301 tcattatggc aggagcttat ataggcgata atgtcagcat tggtgatgag agtattattc
    12361 atcctaatgt agtgatttat aatgatacta aaatcggtaa aaaatgtcat ctgcttgcta
    12421 attgtgtaat aggaagtgac ggttttggtt atgcgcacaa taaaaacggc gaacattata
    12481 aaatttatca taatggcaac gtggttttag aagattttgt agaagtgggg gcttgtacaa
    12541 ctatagatag agcagttttt gatagtacta ttatcaaagc aggtactaag gtagataatc
    12601 tagttcaaat cggacataat tgcaatatag gtcaaaattg tatcattgtg gcgcaaactg
    12661 gaatttcagg ttcaagtgag ttaggacgca atgttattat gggtggtcaa agtgcaacga
    12721 gtggacattt aaaaataggc gattttagca ctatagctgc aagaggcggt gtgagtaaaa
    12781 atttagaagg cgggcgtgtt tatggaggtt ttcctatcat gcttcaaaaa gattggctaa
    12841 aacttcaagc taaaatagca ataaatttta aagaaaaatc acaagattag catcgcatcg
    12901 ccataagagt aaaagcgata tttttctttt atggcgagtt cataaagttt taaacactgt
    12961 tctctaccga taaaagctga aactagcatg ataagagtag attttggtaa atgaaaattg
    13021 gttaaaagat gattttgtct tataggtgga ttttgcgggt gtaaaaaaag atcacaaaaa
    13081 ccattttttg ttttagttct tgtataatat tctatggttc ttgttaccgt tgttcctacg
    13141 cctaaaatag cttgtttaga atctataatt tcacatgctt gctgcggaat attaaaaaat
    13201 tcgctatgta ttttatgctc ttgtatattt tcacattcca cgcttttaaa ggttccagct
    13261 cctacatgca aggttaaatg ataaatttcg tgtttttttc ttaaattttc aagcatagtc
    13321 tcactaaaat gtaaacttgc agtcggagca gccactgcgc ctaaattttt tgcaaagata
    13381 ctttgataat ctttcaaatc acttttttca tcctcccttt taatataagg aggcaagggt
    13441 atatgtccta tcttgtcaag caggttgtaa agatttgagg tgtctaaggt tttatcattt
    13501 tgaaaaaatt gaacttttcg aagaccatca tttaaaagtt ctacaacgcg cgcttttaaa
    13561 tcctctttaa aatataagat ttcatctttt ttaacgcgcc ctttaatttg agctagaaaa
    13621 agtggattgt gagaatttaa aaaaggttga tgtaagaaaa gttctatttt tcctccgctt
    13681 gctttattac cataaattct tgctttaata actttggtat cattgaaaaa aatcgcgcag
    13741 ttgggtaaaa agtcgtgtaa atttttaaaa gtagtgtgaa aaatttcttt gtttttgcga
    13801 tcaaaaacca aaagcctagc atcttctttt ggatttatag gatagttggc tatgagttca
    13861 ttagctagag tgtaatcata gcttgaaaga agtaagtctt tattcattac tttctttatc
    13921 ttttgggaca ggatttacct tttgaacaat taaaatagaa agtccataaa gtccgcaaag
    13981 tggtcctgcc attaaaaatt gagataaaac atcaggtgga gtcataaagg ctgaaaaaac
    14041 aaaaataact aaaacagcta tgcgaaaatg gcgttttaaa aaactatcat ctataagtcc
    14101 gactttagca aagaaaaagg caattacagg catttcaaaa gctaagccaa aagccacaac
    14161 aacttttgta aaaaaatcta cataagttcc tatggtaatt acaggattaa aatcttcatt
    14221 taaaccaaaa ttaatcaaaa atttaaaagc caaaggcact acaacaaaat agcaaaaaca
    14281 agcccccaag gcaaacataa tgctcgcaaa gctaacaaaa ggcaccacaa ggcgtttttc
    14341 attatcataa agtcctggag ctacaaattt ccaaaattgc caaaaaatta caggtagaga
    14401 aaagataaag gctgcaaaaa aactaacctt cattgcggta aataaggctt cttgtacttc
    14461 aattacattt acatgtttgg ctacttcggg taaaacagct ataagtggag cttttagaat
    14521 atctaagata tagcttcgta gagcaaaaca tacaataaac ataactacaa tgcaagcaac
    14581 gcttataaaa aggcgttttc taagttctat taaatgaggt cttaattctt caaacattta
    14641 tttttccgtt tttatcttgt gtttctaatt tgctaagatt tggtttttct tctgtattta
    14701 aattttgtcc gctaaggtta ttttttactt tatcatctct gctatcaaag gttaaatcta
    14761 cctttgtttt atctaaaata tctctcttaa ggtcatcaaa ttcttcaaag ctgagttttt
    14821 tgcgtatatt ttcattagtg cttgaaaatt catctttgta tttcttagct tcttctttta
    14881 agtcattgat gcgtatttct ttttctatgc ttgattttgc atcatctatg ttgcgtttta
    14941 cagcctttag aatttttgct atttgtacta tagcttctgg aagtttatca ggtcctaaga
    15001 ctaaaatcgc tacaactaaa ataactataa tttcaccaaa actcattaat cattactctt
    15061 tgatttgata ttttaaataa atattttact taaaaaactt aaatttaaga tgagagatat
    15121 aaagcaagtt catcgctaat gagaaaatta ggattaaaat atcttttatt tttgtaaaaa
    15181 agtttttttt cttttaataa tatatttatt ttgtcttttt gccattgatt gagttttgtt
    15241 tcatcaatcc ctactatact tctaagtcct aaaaataggt gctctaaatt caagtctttg
    15301 gaacttagtt gctctataga tctaaaagtg ggattttcta tgtaattttt taaatttttt
    15361 gctgtataaa aacgcttatt ttcataaaat cctactgcac ttaatccaca agctaggtag
    15421 ttttttcctt gccaataagc aagattatgt ttgcaaattt gggctttggt ttttgaaaaa
    15481 ttactgattt catattgaaa aaagtcaagc tctagaagtt gtttgatgaa aaatttcatt
    15541 aaattaggag catttttttt gaaatgttct tttttagcaa aggctgtgtt tgattctatg
    15601 gttaaattat aagcactaag gtgtgtgatt aaatccttga tttgttttaa gtgtaagagt
    15661 tcaaattcaa gcattttttt attgtctaat ttcgtatcat aaataagatc taaattgata
    15721 tttttaaaac ctactttatt tgcgttttct aatgttttga taatcatttc ttgattgtga
    15781 attcttccaa gaaagtgaag ttttttagga tgaaaacttt gaactccaaa agaaatgcga
    15841 ttaactccta gatttttcat atttttaagc caatttaatg ttgctgagtt gggattagct
    15901 tcgcatgaaa tttctacatt tttatctagt aagggatata aaattttaaa aatatcttca
    15961 taattatacg cattaacaca acttggtgtt cctccgccta tgaataaggt tttaatttga
    16021 tttgattgaa tgttaaattg ttttaattga aaaacaatat cttcttttaa agccttaaaa
    16081 taggcttttt cataatcatt ttttttcaaa cttgtaaaag cgcaataatt acatttgctt
    16141 tcacaaaatg gaatatggat ataaaaatgc ataaaaaccc taaaatattt tattaaattt
    16201 ttaatgtatt ttaataaaaa tttgatttga tttaggttaa aattatatcc ttgagattta
    16261 aggaacaata ttgtggaaaa cgagaaaaat tatagaccaa atgttgcagc tattgtttta
    16321 tcaagttctt atccttttga gtgtaagatt tttatagcta gaagaagtga tatggataat
    16381 atttggcaat ttccacaagg aggtattgat aaaggtgaaa gtgtcaaaaa cgctttattt
    16441 agagaactaa aagaagaaat aggcactgat gaggttgaaa tcattgccga gtatccagaa
    16501 tggttgagtt atgattttcc gagtaaaatt gttaaaaaaa tgtatcctta tgatgggcag
    16561 attcaaaaat attttttagt gcgtttaaaa cacggtgtta caatcaatat taataccaag
    16621 catcccgaat ttgatgatta tcaatttgtg agtgttaaac aaatttttga aatgattaat
    16681 catttcaaaa aaaatattta tgttaaagtg atcaaatatt ttgaaaagaa aggttatatc
    16741 taaaatgctt atagttcaaa aatatggtgg aacaagcgtt ggaacacttg agcgtatcga
    16801 agcagtagcc aatagggtta tccaaagtgc gcaacagggt aatcaacttg ttgttgtagt
    16861 atctgcaatg agtggggtga caaatactct tattgagcaa gctgaatatt ttagtaaaac
    16921 tcctaatggt aaagatatgg atatgctttt aagcagcgga gagcgtgtaa caagcgcttt
    16981 actttctatc gctttaaatg aaaagggttg tcctgctata tcattttctg ggagaaaagc
    17041 aggaattatt acagatagtg tttttacaaa ggcaagaatt catcatattg atacaaaagc
    17101 gataaaatca gaacttcaaa atggtaaaat agtcgttata gcaggttttc aaggtgtaga
    17161 tgaggaaggt aatgtaacta ccttagggcg tggtggaagc gatttaagtg ctgtggcggt
    17221 agcaggtgct ttaaatgcgg atttgtgtga aatttatact gatgttgatg gggtttatac
    17281 aacagatcca agaattgaac caaaggcaaa gaaattggat aaaatttctt atgaagaaat
    17341 gcttgaactt gcaagtttag gtgcaaaagt tttgcaaaat cgctctgtag agcttgcaaa
    17401 aaaattaaat gttaatttag taactagaag tagttttaac aataacgaag gaacaatgat
    17461 aacaaaggaa gatggaatgg aacaagcttt agtaagtggt attgctttgg ataaaaatca
    17521 agcaagagtg actttaagaa atgtagaaga taagcctgga atcgcagctg aaattttttc
    17581 tgttttggca aatgaaaata ttaatgtaga tatgattata caaaatgttg gagttgatgg
    17641 cgctacaaat ttgggtttta cggttcctca aaatgaactt gaattagcta aaaatgctat
    17701 gcaaaaaatt ttaagctcaa aaacaactat agaaagtgat agtgctgtag taaaagtttc
    17761 tatagtcggc gtaggcatga aatcacattc aggagtggca agtaaagctt ttaaagcttt
    17821 agctgatgag gggattaata tcggtatgat ttctactagt gaaataaaaa tttcaatgat
    17881 agttcatgaa aaatacggag aacttgcagt tagagcacta catgagtgct acggacttga
    17941 taaataaatg agtgattttt taagttttac tcttgaaaat attcgcaatg gcggagcttt
    18001 tatggcatgg ttagagtcgc gtcgtttaga atgggctcct ttgatggctg caagacttaa
    18061 atatctttta gagggacgca cttttgtctt aatgtgcgat gaacaaagat cttggtatga
    18121 agagtatttt ttaaaaaata taaattcaaa agccactcgt cccatgctcc cttttgtgtc
    18181 gttaaattct ttatgtaaga agaaagtaca aagttcagaa gatatagctt tacttaatga
    18241 cttgcttgac atttcttttc ctaatggtta tgtatatttt tatataggaa gtgcttctga
    18301 taataaatct ttaatcgcta aatcaagaga tgatagttta ttgtggcttt ttgatgagca
    18361 gttacaagat agtttttatt taaattctaa agataaagac ttggatatca agcttattag
    18421 tttatatcaa ctttttgatg taagtttgga tgcaatatta ttttccaagg tgcaattagg
    18481 ataaatattt tgtttattag taagattatt atcagtgaag attttttagg tattaaggaa
    18541 gaaatgatta ataattttgg tattaaaaaa ttaagatttt ttataccaca aaatgaattt
    18601 ttacttgatg atgcaagagc ggttgaaaaa gaaagctata tcgcagaaac tgaagaaaaa
    18661 attattgttt taatggcgga ttcttatagg atagaagcgc aaaatttttt acttaaactt
    18721 cttgaagaac ctccaaaaaa tattaaattt cttatcgtgg taccttctaa aaatttactt
    18781 ttacctacca taaaatcgcg tcttatttgt gaaaaaagaa aagttgaaaa ggaggttaaa
    18841 aaacttgatt tagaccttaa aagaatggat ttaagaatgc tttttgattt tttgcaaaaa
    18901 aatgaaaatt tagataaaaa tgaacttatg gatcaaattg cattacttgc taaagaatgt
    18961 gtaaaatata aagattttaa tgctgaagaa ttagagttct tttatgaaag ttatgagctt
    19021 gcaaaattaa attctaaaag tggggtactt ttggctactc ttttattaaa ttactataca
    19081 aagaaataaa atgaaatttt ttaaaatcaa tccaaatacc gattttaatt tactttgttc
    19141 tttcataaat ccccataaaa tggggcaaaa gatcatgagt gaaaaaacaa aaactcattt
    19201 tatttttatc aaagatattt ctactcctgc agcaaatatt ttaaagcaag atgctttaag
    19261 agtaggagct gaactcatca cccataaaga agtaattact gccaaaatta ctcattcaaa
    19321 tgcgctttta atggcaagta aagagcaaat tcaaaagctt attgtcaaag aaaaacttca
    19381 agattttgga cttaaaaatt tggctctttt tttgcaaaaa gattttttaa aaccgaaaaa
    19441 agccgagctt atggcagtaa ttaatgtcaa tgaagacagt tttaatgcaa aaagtcgtgc
    19501 gagtgaagaa gactttgaaa aaaggcttaa tgactttctt gctttaaagc ccgaatatat
    19561 cgatataggt gcggtaagtt caagacctgg gagtgagtat tgtggtaagg aagaggaatt
    19621 taaaagactg aaaaaagtac ttgacttaat ttatgagaaa aattattacg aacaagcgat
    19681 ttttagttta gatagttttg atgaatattg tctagaatat gctttaaata agggttttaa
    19741 actcattaat gatattacaa gtttaagaaa tcttaatcta gccaaacttg caagtaaata
    19801 tgaggcaaaa tattgcttaa tgcacatgca aaacaatcca aataatatgc aagataatcc
    19861 tttttatgaa gatttgcttg atgagatgac tttatttttt aaagaaaaac ttgaactttt
    19921 agaaagtttt ggagtaaaag aaagtatttt agatgtaggt attggttttg gaaagagtgc
    19981 ggggcataat atgattttaa tcaaacactt agaacatttt ttgcaattta ataaaccttt
    20041 acttataggt gcgagtcgca aaagtgtgat taatgcgtat tttcaaagcg agattaaaga
    20101 tcgtttagca gcaactttgt atttgcattt aaaagctttt gaaaatggtg ctagtattat
    20161 aagagtgcat gatttatatg aacataaaca actttttgct ttagcgcagg caatggataa
    20221 tataggagtt tagatgaaaa aagaagagta tttagaaaaa gttgctttag caaatttgtg
    20281 gatgagggca tattatgaaa aagatgaacc cttggctagc gatgaagaat acgatgcttt
    20341 aatcagagaa ttaagtgttt ttgaagaaca aaacaaagat gaaatttcaa aagactctcc
    20401 aacgcaaaaa atagctccta tcatacaaag cgagtttaaa aaaatagctc atttaaggcg
    20461 tatgtggtcg atggaagatg tgtttgatga gagtgagctt agggcttggg caaaacgcgc
    20521 aaaatgtgaa aaaaactttt ttatagagcc taaatttgat ggagcgagtt taaatttact
    20581 ttatgaaaat ggtaaattag caagcggtgc cactaggggc gatggcgaag tgggtgagga
    20641 tataacgctt aatgtttttg agatagaaaa tatacctaaa aatatagcct ataaagaaag
    20701 gatagaaatt cgtggagaag tggtgatttt aaaagatgat tttgagaaaa tcaacgaaaa
    20761 aagagccctt ttaaatcaaa gtttatttgc taatccacgc aatgctgcaa gcgggagttt
    20821 aaggcagctt gatacaagca tcactaaaga aagaaatttg aaattttatc cttggggagt
    20881 aggggaaaat accttaaatt tcaccaaaca cagcgaggtg atgcaattta tcagagagct
    20941 tggtttttta aaggatgatt ttgtaagact ttgcactaat ttagacgaag ttttaaaagc
    21001 ttatgatgag cttttagctc taagagaaaa aaaacctatg atgatggatg gaatggtggt
    21061 aagagttgat gatcttgcac tttgtgaaga attaggctat acggtaaaat ttccaaaatt
    21121 tatggcagct tttaaatttc ctgcacttga aaaaaccacg cgtttaatag gggtaaattt
    21181 acaagtagga agaagtggag tgatcactcc tgtggcggtt ttagaacctg taaatttaga
    21241 tggggttgta gtaaaatcag ccacccttca taattttgat gaaattgcaa gacttgatgt
    21301 taaaatcaat gattttgtaa gcgtgataag aagtggtgat gttattccta agatcactaa
    21361 ggtttttaaa gagcgtagag aaggtttaga gatggaaatt tcacgcccta aactttgtcc
    21421 tacttgccaa agtgagcttt tggatgaagg aactttaata aaatgtcaaa atatagattg
    21481 tgaagataga cttgtaaatt ctatcattca ttttgtttct aaaaaatgtc ttaatatcga
    21541 cggacttgga gaaaatatag tagaactttt atacaagcac aaaaaaatca ctacgcttga
    21601 gagcattttt catttaaaat ttagtgattt tgaaggtttg gaaggcttta aagaaaagaa
    21661 aatcaacaat cttttaaatg ccatagagca agccagagaa tgtgagcttt ttcgttttat
    21721 cacggcttta gggatagagc atattggcga ggttgcggct aaaaaattaa gtttaagttt
    21781 tggtaaagag tggcacaagc aaagctttga agcttatgcc aatttagaag gttttggaga
    21841 gcaaatggct ttaagtcttt gcgaatttac gcgtgttaat catacaagaa ttgatgaatt
    21901 ttacaagctt ttaaatttga aaatagaaaa acttgaaatc aaaagcgatg gtgtgatttt
    21961 tggtaaaact tttgtgatta caggcactct ttcacgccca agagatgagt ttaaggcttt
    22021 gatagaaaag cttgggggta aggtaagcgg ctcggtttct aaaaagactg actatgtgct
    22081 ttttggagaa gaggcaggtt ctaagcttag taaggctaaa gagcttgaag taaaatgtat
    22141 agatgaaagt gcttttaatg agcttgttaa agaatagttc ttatatttta acgcttttaa
    22201 gcctttttgg ctttttgcta acttggcaaa ggagtgcttt ttctttattt tttttaattt
    22261 ctattttttt aacacttttt tgggaattct ttttattttt aaagcttaga aaaaatatta
    22321 taaaagaagc tactttgatt aagggaagtt tgttttatcg tgttagtatg ggggattttt
    22381 atctttatat ttttagtttt ttcttggcga tttttggact tgtttcttta tttttaaatt
    22441 ttttaaatct tga
//
LOCUS       DAPIWB010000026        22297 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.027, whole genome shotgun sequence.
ACCESSION   DAPIWB010000026 DAPIWB010000000
VERSION     DAPIWB010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22297)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22297)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22297
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.027"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            31..882
                     /locus_tag="RJ266_000798"
     CDS             31..882
                     /locus_tag="RJ266_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HDV7354561.1"
                     /translation="MKFYTILSILFISFMLSACAVLQKSSPLQENKDFYILDTHTQKK
                     ISFEDMILELLKADVILLGEKHDEVKHKISQVMIFNALEGNLSSQNINFDVALEMLAS
                     TEQNHLDKAFKNKKTIKANELTNALNWDKVWKWKDYEQFVNVVFYSKSKILGANLSRS
                     EITSIYNGAQPLKGYVSTTNEVKKQLFDIISLSHKLNPEENKELLDKLVEIQQFKDRR
                     MADILVHHVNKVLLLAGSYHTSKKIGIPLHIQDFKSSKKIVVVNLSYGEIDLKDSDYV
                     LIYKGEE"
     gene            879..3146
                     /locus_tag="RJ266_000799"
     CDS             879..3146
                     /locus_tag="RJ266_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDV7354562.1"
                     /translation="MKKLSLFCAVGLCFASFAFSEELEFDSLEISGSKIKNDEKPFVT
                     PGATSTREGIGSDTQSIDSIVRSIPGTYTNTDQAQGTVQVNIRGMSGFGRVNTMIDGV
                     TQTFYGSASDDPARFHSQTGTSAFGAVIDTNFLIGVDVTRGTFEGVGGANALMGSANF
                     KTIGINDIVHDGNIFGFLGRFSYGSNGIGPSYMSAVAGKTELENNGYVGALFGYSAKR
                     ITQNYTVGGGGKIGSSMVDTDGDGIADTNIAPFDPDFLTQKPNSQLFKLEYVPNSFTN
                     TIFSYRRYQNELAGRKIHNDNYQLDFWHNPNEWLNVNTLIAYNQGIQTYGSKSTFAAN
                     DAIANTKAKNIATTFDISDTLEGEWHGFNLNTRFGANILLNDYKNTLNTSIQGVNSIP
                     FQPRGKQNLFTYYLDNSLNYGIFTLDTNVNLLDWNIKGHRPACDEVNFMCFPKAATDI
                     DKNGLRLNASVMLSAAIHELFTPFVSFARTNRAPNVQEMFFSNNEGNGINPFLKPEQA
                     NTWQIGFNSFKHGLLKDDDRFGFKAVYYHTKIKDYIYNEQFYLEDPSKDPPSSQFYMH
                     LNSADDTIFKGVELELSYDLGFAYAKAMYSRQDTSSTISQTSGPLLGSFSASKIMELP
                     KDYANVELGFRLNDKISFGGIAKYTGKAKRVNPNTDDWNKDPNNPYYPKPTTQDLPKI
                     PIIVDLYWNIEWFKNLTMRAEVQNLFDKNYMDALNAYNSLDNQLQYNGAGDPIYLFSN
                     SARGRTFIVSFEYKY"
     gene            3158..3919
                     /locus_tag="RJ266_000800"
     CDS             3158..3919
                     /locus_tag="RJ266_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HDV7354563.1"
                     /translation="MLKKMFLFCFLLLNLNAEANVTDTNLSFDSSKIETKAPKIELSL
                     SSLYQNADEVVKGVIYILVLFSILAWAVFISKLMQFYFMKKNLDLSIQKIKELKNLNE
                     LDQTKDFAGVLSLEIQDELEKSEYKNDHIKERIELRLQNTISKQITASKNGLSLLASI
                     GASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVAPGIAEALFATAFGLIAAIPAVLF
                     YNYLTRKNLKLMHHLDELANFVYILFHRSYFNDKN"
     gene            3906..4316
                     /locus_tag="RJ266_000801"
     CDS             3906..4316
                     /locus_tag="RJ266_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HDV7354564.1"
                     /translation="MIKTEMAHKEEELSEINITPFIDIMLVLLIVFMAVTPLITSSIK
                     IELPKSSQQAEDKLKNPIILYLNTDNTLAINDDKLSLENLSSALDIKTKGNKEEIIYF
                     HIDKSVKYEDIMQVMQKLKENGYGKIALSSKKMD"
     gene            4318..5064
                     /locus_tag="RJ266_000802"
     CDS             4318..5064
                     /locus_tag="RJ266_000802"
                     /inference="COORDINATES: protein motif:HMM:TIGR01352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDV7354565.1"
                     /translation="MKSSVIFGFVLSLILHTLVLMFFLFSFYTQEKSSGVDFKQGAEF
                     TSIMMVSELPIGELKEVSIDQKKSNSQDKNKKQDERISLNSQDKNAVLKVQKKIEKQD
                     ENQAQKEIANASENSKFKNESLSAPLQSNEDKTQTIVSGNAKEQVKSYQALLMAHLTK
                     FKKYPQEAIIQKQEGVVRIRVSIDESGNVLSKELKKSCPYAALNDEALSLFKRASPLP
                     KPPKEMLKNGDKISFVMPIDYNIKDYLGKK"
     gene            5110..6315
                     /locus_tag="RJ266_000803"
     CDS             5110..6315
                     /locus_tag="RJ266_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HDV7354566.1"
                     /translation="MIMFSSFFKSKKWALWAYLGLFLLLFFLFIQTSLNVAINSWYSD
                     FYNVLQKPKIELLDSNSTQKIEENLENNATLIQEANQRAEQNFQKANFINKGALYYYQ
                     NLLEYFFNSRAMIEKPNYSASDFYALILVFLAIAIPYVLIATINIYFASVYAFKWREA
                     MTFSYLKFWKNKDDNIEGSSQRIQEDTYNFSKIVESLGLSFIKALMTLVAFIPILWSL
                     SDVVSKALFANLSENSSFYFLKNIDGLLVYIALLISLGGLVVSWFVGIKLPGLEYNNQ
                     KAEAAFRKELVYAEDNRKEYAKNETMIELFTGLKFNYKRLFLHYGYFNIWLILFEQMI
                     VIVPFLIMAPGLFAGAIGLGIVMQINNAFDQVRSSFSVFITNWTTITQLRSIYKRLKE
                     FEKNISYKS"
     gene            6414..7772
                     /locus_tag="RJ266_000804"
     CDS             6414..7772
                     /locus_tag="RJ266_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HDV7354567.1"
                     /translation="MDPSQVLDLNQTSTASFDAGYSMLMVVVALALVFLNGFFVLSEF
                     SIVKVRRSKLEEMVKEKKAGAKKALEVTSRLDTYLSACQLGITLSSLALGWIGEPAIA
                     KMLEIPLINLGFSTVIIHTIAFIIAFSIITLLHVVLGELVPKSIAIAVADKAVLFIAR
                     PLHWFWMLFLPCIKIFDFLAAISLKLFGIKPAKESELTHSEEEIKIIASESQKGGVLD
                     EFETEIIRNAVDFSDTVAKEIMTPRKDMICLNKQKSYEENMQIICEHKHTRFPYIDGS
                     KDTILGMIHIRDIIQNELNHKSQNLDTFVKPLILVPENISISKVLVMMNKERSHTALV
                     VDEYGGTAGILTMEDIMEEIIGEIKSEHEEDSYKKLAENIYEFQGRCDIETVEEMLVI
                     NYDEDLEQVTIGGYVFNLLGRLPMVGDRIEDELCYYEVKKMDGNSIERVKVVKKTNKD
                     EE"
     gene            complement(7785..8969)
                     /locus_tag="RJ266_000805"
     CDS             complement(7785..8969)
                     /locus_tag="RJ266_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein phosphatase"
                     /protein_id="HDV7354568.1"
                     /translation="MRILLVLRGNYYAGQEEFIKNNKLQNYTLDLNALRLLSGSVKNI
                     ISEYKILNVKNDEDLSKILLKLLEMRMQKGEFSIINAYNETLKIYKDLAKQYRYKIYV
                     IVFDSSLKQCQEKNLLEAKKNGYIIPYALLEKTQDLLKKNPKKYPILDSRDWKKCLYQ
                     MPNLSKYKKIHHIGDLQGCYSVLKEYIKTIKEDEFYIFLGDYINRGIENGKVIKFLLK
                     ICEKENVCLLEGNHERHLIKWANGELSNSKEFNENTLKDFRKEKLTPRDARKLYPHLK
                     ECLYYKFQNKFIFCSHGGVNFIPSKPEKISFIPSHDFIYGVGGYEDSQKVANQFCSFT
                     SDNLYQIFGHRNKEKLPMKIAKRVFLCEGKIDDGGYLRVVTLDEKGFECIEIKNQIYK
                     KK"
     gene            complement(8979..9188)
                     /locus_tag="RJ266_000806"
     CDS             complement(8979..9188)
                     /locus_tag="RJ266_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HDV7354569.1"
                     /translation="MAKDANGIELNTGDSVSVIKDLKVKGVSTTLKRGTTIKNIKLTS
                     KEGEIEARVDKFGVIVLKTEFLKKI"
     gene            complement(9181..9900)
                     /locus_tag="RJ266_000807"
     CDS             complement(9181..9900)
                     /locus_tag="RJ266_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HDV7354570.1"
                     /translation="MFEWIFSIDAWITLATLSALEIVLGIDNIIFLAILVSKLPPEHR
                     DKGRILGLAFAMITRILLLLSLFWVMKLVTPLFSVLGNEISGRDLVLLLGGLFLIVKS
                     IKEIKEQISHQEESQSHFKASNKLWIVVAEIAVIDIVFSLDSVITAVGIAQDVTIMII
                     AVIIAVAVMLFASKPIADFVEKYPSIKILALAFLVLIGVVLVAESFDIHIDKAYIYTA
                     MAFALVVQILNILDQRKEKNG"
     gene            complement(9972..10538)
                     /gene="purN"
                     /locus_tag="RJ266_000808"
     CDS             complement(9972..10538)
                     /gene="purN"
                     /locus_tag="RJ266_000808"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HDV7354571.1"
                     /translation="MLVKLAVLFSGNGSNLENILEKLHKKTIGENTYEVVLCICNKKD
                     AFGVQRAKKFGLDTVIVDHKAYNTREEFDTILVQKIKESGANLTVLAGFMRILSPVFT
                     KNIKAINLHPSLLPLFKGAHAIKESYESDMKVAGVSVHWVSEELDGGMIIAQKAFEKR
                     NLSFEEFEEKIHSLEHEILPLSVIEIFS"
     gene            complement(10529..11899)
                     /locus_tag="RJ266_000809"
     CDS             complement(10529..11899)
                     /locus_tag="RJ266_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ADP-dependent NAD(P)H-hydrate
                     dehydratase/NAD(P)H-hydrate epimerase"
                     /protein_id="HDV7354572.1"
                     /translation="MKAIIDNIKILEQNAINKGLDELILMENAGLNLAKLIKKEAKKI
                     RIQRKIRKVKILFLLGGGNNASDGLVALRNLKHAKAYKIGFKENTLFKKQEQILQNYA
                     FKFCKKEPNFKKFHIIIDCILGTGSNRCLDEKTSLIIQKVNQSKALKIACDIPTNLGF
                     YPCFKADITFCMGALKEILLEDFAKEFVGRIKIANLGIRSKKFYPNSQAFLLEKKDLK
                     TIDRKINANKGNFGHIYIVANASAGTLAGLGALNFGAGLVSLVAQKSFSPLLMLKEKI
                     ENNASAIALGMGLENLDFLKDEILQNTPLILDANCFLSEALLWYLNRKDVVITPHPKE
                     FIKLYKMCFDENLDIETLQKNRFFYARKFSQNYDCVLVLKGANPIIVQKEKLFVVNLG
                     NQALAKGGSGDVLSGMIAAHLGFGFSALEAAKNATLAHGLVAKKYKFNKNSFDALKLI
                     KGLKCL"
     gene            complement(11883..12581)
                     /locus_tag="RJ266_000810"
     CDS             complement(11883..12581)
                     /locus_tag="RJ266_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HDV7354573.1"
                     /translation="MENKSIAIFIDAENIPAKYAKSIFDIASDYGEVIIKRIYGDWTQ
                     KNIQGWREQIAEYSLIAMQQFNFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSDSD
                     YTSLIQKLRENKKQVIGMGLEKSIKSYVNAFSEFFYLDKDESKKEDILSKDYLRALIN
                     ITEQLIDEKGRAEYAQIRTNMNRKYSDFHPQNYGFKNFRALIQKFLPKMKKFEEEREK
                     NIYFLVKKDYESYY"
     gene            complement(12583..14088)
                     /locus_tag="RJ266_000811"
     CDS             complement(12583..14088)
                     /locus_tag="RJ266_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HDV7354574.1"
                     /translation="MKKLKCISFHEGLDIIEVESTFTRGLPNLSIVGLASTAIKESVE
                     RIKATLLSCDFAFPAKKITINLSPSGIPKKGSHFDLAIALLILLQNEELDDFFVVGEL
                     GLDGSIKSTNELFSLLLFLSAKIKKAKIVVPKSIAQKASMIPNLEVYGLENLNEAIEF
                     FKEKNYENFRFSHNHPLFANPLQIENEIFLQNMDFKLDFKDIKGQEKAKRACMIAALG
                     MHNILFEGSPGSGKSMCAKRLVYIMPPQSLNEILMQNAYMSLDSKDCEFTKIRAFRHP
                     HHTSTRASIFGGGTKNARIGEVALANGGVLFFDEFPHFNKQIIESLREPLEDHKIHIS
                     RVNSKIIYETKFSFIAAQNPCPCGNLFSKNLSCVCSENEIKKYKNHISAPIMDRIDLY
                     VAMDEISKDDKTSISSKEMSEKILQAFIFSKKRGQKEFNGKLKDEDLSRFCVLEKDAK
                     DTLDLAISRYNLSLRSLNKILKVSRSIADLEQSLNISKTHILEALSFRARN"
     gene            complement(14085..14612)
                     /locus_tag="RJ266_000812"
     CDS             complement(14085..14612)
                     /locus_tag="RJ266_000812"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HDV7354575.1"
                     /translation="MVRKIITYPNPRLFLNSEIVNKFDTELHTLLDDMYETMIASNGV
                     GLAAIQVDIPLRVLLVNIFDENDEQKKEDLLEIINPEIIPLDEEMITCTEGCLSVPDF
                     FEEVKRYNHILLKYQDRFGEFKELEAKGFLAVAIQHENDHLNGHLFIEKISFAKRQKF
                     DKEFKKKKKNHKKEK"
     gene            complement(14648..15232)
                     /gene="clpP"
                     /locus_tag="RJ266_000813"
     CDS             complement(14648..15232)
                     /gene="clpP"
                     /locus_tag="RJ266_000813"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HDV7354576.1"
                     /translation="MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIV
                     AQLLFLEAEDPTKDIYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFL
                     LSCGAEGKRFALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQK
                     VAKIAKDTERDFFMSAQEAKEYGLIDKVLEKSFK"
     gene            complement(15232..16566)
                     /locus_tag="RJ266_000814"
     CDS             complement(15232..16566)
                     /locus_tag="RJ266_000814"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HDV7354577.1"
                     /translation="MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGF
                     RPGKVPVSAVLKRYERELTQDAEQNLFKSAVNSALQELKKENKELVGEPYFEKFDRKD
                     GEIIAELILSFKPEIKLEGYEKLIPEYQTPKVSKKEIDEKKDELLKRFATPEAIKTKR
                     ALKEGDFAKFDFEGFVDDKAFEGGKAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIK
                     VTFPKEYGAAHLAGKDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKL
                     KEQIKNEKLFKLVNDELKGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEI
                     EELKASKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRY
                     GMNPKEHLENYKKQGALPAVKMALIEEKLFNDIFIPKTEKSEKVSKKEKEDK"
     gene            16709..17281
                     /gene="folE"
                     /locus_tag="RJ266_000815"
     CDS             16709..17281
                     /gene="folE"
                     /locus_tag="RJ266_000815"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HDV7354578.1"
                     /translation="MQKKFEDCVKTILEIIGENPNREGLIKTPNRVFKAYEFLTSGYT
                     QNVKDILNDALFESSNNEMVLVRDIEFYSLCEHHLLPFFGRAHVAYIPNKKVVGLSKI
                     PRLVEVFARRLQIQEQLTEQIAQALMENVDAKGVGVVIEARHMCVEMRGIQKANSTTT
                     TSALRGIFLKNEKTREEFFSLINSAKQVRF"
     gene            17281..18666
                     /gene="fliI"
                     /locus_tag="RJ266_000816"
     CDS             17281..18666
                     /gene="fliI"
                     /locus_tag="RJ266_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein export ATPase FliI"
                     /protein_id="HDV7354579.1"
                     /translation="MNLEKLRSKLGKENLSAIFGEITKISATSIEIRGLKTGVGDIVK
                     LVSNENENLNTLAMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGR
                     VVDPFMRPKDGKGAIEVTKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQK
                     LGIFAGSGVGKSTLMGMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIV
                     ATSDDSALMRKYGAFCAMSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTT
                     KGYPPSVLSLLPQLMERTGKEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVL
                     SRELTDFGIYPPINIQNSASRVMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQ
                     KGSDKELDEAISKKEFMQKFLGQNPEESFEFNQTLELLSQIDTPNTPLPPTQNINVGS
                     ASATLPNPNLK"
     gene            complement(18669..20006)
                     /locus_tag="RJ266_000817"
     CDS             complement(18669..20006)
                     /locus_tag="RJ266_000817"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDV7354580.1"
                     /translation="MCAVVGVINSKNASTYAYYALFAMQHRGQEASGISVSNGKNIKT
                     IKAKGEVSQIFNPDNLKTLEGEIAIGHNRYSTAGNSSLNDAQPIAATSVLGDIALAHN
                     GNLVNKEEVRSRLIQDGAIFQTNMDTENVVHLIARSKQESLKDRFIESLKECIGAYCF
                     VLASKDKLYVVRDPHGVRPLSLGRLKDGGYIVASETCAFDLIEAEFIRDVKPGEMLIF
                     TQGNDKFESIELFSQTPRICAFEYIYFARPDSIVEGKSVYEVRKKMGEALAKKFAYKA
                     DFVVPVPDSGVSAAIGFAQYLQIPLEMAIVRNHYVGRTFIEPTQELRNLKVKLKLNPM
                     RKVLEGKEIVVIDDSLVRGTTSKKIISLLRAAGASKIHLAIACPEIKFPDTYGIDTPT
                     FEELISANKNAEEVREYVEADTLSFLSIEELTQSIGDERKYSLISFDGDYFIK"
     gene            complement(20008..20736)
                     /locus_tag="RJ266_000818"
     CDS             complement(20008..20736)
                     /locus_tag="RJ266_000818"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HDV7354581.1"
                     /translation="MIKIGIYGAKGRMGKQIEECLKSETQAQISILYDKGGNLGELFE
                     KSDVIIDFSSPSGTHELLNYARTIPKPLVIGTTGLDEKILHLMQSASEVMPIFYATNM
                     SLGVAVLNYLASKASQMLRNFDIEILEMHHRHKKDAPSGTAMTLAQSVAKARNLELEK
                     VRVSGRDGIIGERSKDEIAVMSLRGGDIVGRHTVGFYEDGEFLELNHTATSRATFAKG
                     AIKIAIWLSKQEAKMYSINDFLGI"
     gene            complement(20799..21980)
                     /locus_tag="RJ266_000819"
     CDS             complement(20799..21980)
                     /locus_tag="RJ266_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDV7354582.1"
                     /translation="MSLALTFRPENFDDILGQYELTEIFKKFTALQKLPHSIFFGTAG
                     SGKTTFARVVAKEFGLDFYEFDGGNFKLEELRKILDNYKNSLYKPLIFIDEIHRLSKT
                     QQEMLLIPMENYRLILIGASTENPYFVLSSGIRSRSMLFEFKSLGVKELETLLLRVQE
                     KMKFSIDKEAKDFLLKSADARAMLNLLEFVLVLDEKHISLENLKKLRNTINSEGVSSK
                     DTHYILASAMIKSLRGSDVDAAIYYLARLIDAGESADFIARRLVIFSSEDIGNADPNA
                     LNLAVSTLEAVKNIGYPEARIILAQCVVYLASTIKSNASYKAINEALNYVKNNEALEI
                     PNYLNNNHQEKQNYLYPHDFGGWVEQKYLSKNLKFYHSKGLGEEAKLLDNLYKLKNHK
                     A"
     gene            complement(21980..>22297)
                     /locus_tag="RJ266_000820"
     CDS             complement(21980..>22297)
                     /locus_tag="RJ266_000820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354583.1"
                     /translation="NSNFNISHFIQKNLDLEIQNLILEKNKQNISLQGNLNINNSYQA
                     KLQVISSDEPDEIFPWTKDYGGLNQYFLKENNNFFLNLSYDSLANPQLKINGSEFSNM
                     DLN"
BASE COUNT         7475 a         3559 c         3314 g         7949 t
ORIGIN      
        1 aaataaacca ctaagaaagt aacaataata atgaaatttt atactatttt aagcattcta
       61 tttataagct ttatgttgag cgcttgtgct gttttgcaaa aatcatctcc acttcaagaa
      121 aataaagatt tttatatact tgatacgcat actcaaaaaa agatttcttt tgaagatatg
      181 attttagaat tgctaaaagc agatgtgata ctgcttggcg aaaaacacga tgaggttaaa
      241 cataagataa gtcaagttat gatttttaat gccttagaag gaaatttaag ttctcaaaat
      301 ataaactttg atgtagcttt agaaatgtta gcaagcacag agcaaaatca cttagataaa
      361 gcttttaaaa ataaaaaaac cattaaagcc aatgaactta ctaatgcatt aaattgggat
      421 aaggtctgga aatggaaaga ttatgagcaa tttgtcaatg tggtttttta ttcaaagtca
      481 aaaatattag gtgcaaatct ttcacgctca gaaattacaa gtatttataa tggggctcag
      541 cccttaaagg gttatgtttc aaccacaaat gaagtaaaaa aacaactttt tgacattata
      601 tccttaagcc ataagctaaa tcctgaagaa aataaagaat tactagataa attggtggaa
      661 attcaacaat tcaaagacag gcgtatggct gatatattgg ttcatcatgt aaataaagtt
      721 ttattgctag ctggaagcta tcatacaagt aaaaaaatag gaattccttt acatatacaa
      781 gattttaaaa gcagtaaaaa aatagttgta gtgaatttaa gctatggaga aatagattta
      841 aaagacagtg attatgtttt gatttataag ggggaggaat gaaaaaatta agtttatttt
      901 gtgctgtagg tttatgtttt gctagttttg ctttttctga agaattagaa tttgatagtc
      961 ttgaaatttc aggttcaaaa atcaaaaacg atgaaaaacc ttttgtaact cctggagcaa
     1021 caagcacaag agagggtata ggttcagata cacaaagtat agattctata gtgcgtagta
     1081 tacctggaac ctacacaaac acagatcaag ctcaaggtac agttcaagta aatattcgtg
     1141 gtatgagtgg ttttgggcgt gttaatacca tgattgacgg tgttactcaa actttttatg
     1201 gtagtgcatc agatgatcca gctagatttc attcacaaac gggaacttca gcttttggag
     1261 ctgttattga tacaaatttc ttaatcggag ttgatgttac aaggggaact tttgaaggag
     1321 taggtggagc aaatgccttg atgggatcag caaattttaa gaccataggt ataaatgata
     1381 ttgtacatga tggcaatatc tttggatttt taggacgatt ttcttatgga agcaatggaa
     1441 tcggaccaag ttatatgagt gcagtggctg gaaagactga acttgaaaat aatggatatg
     1501 tgggcgcgct ttttggttat agcgcaaaga gaattactca aaattacact gtaggcgggg
     1561 gtggcaagat aggtagtagt atggttgata ctgatggaga tggtatagct gataccaata
     1621 tcgctccttt tgatccagat tttttaaccc aaaaaccaaa ctctcaactt tttaaactcg
     1681 aatatgtccc aaattctttt acaaacacta tattttctta tcgtagatat caaaacgaac
     1741 ttgccggtag aaaaatacac aatgacaatt atcaacttga tttttggcac aaccctaatg
     1801 agtggcttaa tgtaaatacg cttattgcct acaatcaagg catacaaacc tatggatcaa
     1861 aatctacttt tgcggcaaac gatgccatag ctaacacaaa ggcaaaaaat attgccacta
     1921 cttttgatat aagtgatact ttagagggtg aatggcatgg atttaatcta aacacacgct
     1981 ttggagcaaa tattttgctt aatgattata aaaatacctt aaatacatca attcaaggag
     2041 taaattctat accttttcag cctcgtggaa aacaaaatct ttttacttat tatcttgata
     2101 atagtctaaa ttatggtatc tttacacttg atactaatgt gaatctttta gattggaata
     2161 tcaaaggaca cagacctgct tgcgatgaag taaattttat gtgttttcca aaagcggcga
     2221 cagatataga taaaaatgga cttcgcctga atgcttctgt catgctttca gctgccatac
     2281 acgagctttt tacacccttt gtaagttttg cgagaacaaa tagagcccct aatgtgcaag
     2341 aaatgttttt ctcaaataac gaaggcaatg gtatcaatcc tttcttaaaa ccagaacaag
     2401 ccaatacttg gcaaataggt tttaattctt ttaaacatgg acttttaaaa gatgatgatc
     2461 gctttggttt taaagccgtg tattatcata caaaaataaa agattatatt tataatgaac
     2521 aattttatct tgaagatcca agtaaagatc ctccaagctc gcaattttat atgcacttaa
     2581 attcagctga tgataccata tttaagggtg tggagttaga attaagctat gacttgggtt
     2641 ttgcttatgc taaagctatg tattcaagac aagatacaag ttcgactatt tctcaaactt
     2701 caggacctct tcttggctct ttttcggcaa gtaaaatcat ggagcttcca aaagattatg
     2761 caaatgtaga gcttggcttt aggttaaatg ataaaataag ctttggtggt atagcaaaat
     2821 acacaggcaa agcaaaaagg gtaaatccaa atacagatga ttggaataag gatccaaaca
     2881 atccttatta tcctaaacca accacacaag acttaccaaa aattcctatt atagtagatt
     2941 tatattggaa tatagaatgg tttaaaaacc tcacaatgag agcagaggtg caaaatttat
     3001 ttgataaaaa ctacatggat gccttaaatg cttataattc cttagataat cagcttcaat
     3061 ataatggagc aggtgatcct atctatcttt ttagcaattc tgctcgcggt cgtactttta
     3121 tagtaagttt tgaatataaa tattaaggaa tatacaaatg ttaaaaaaaa tgtttttatt
     3181 ttgtttttta ttgttaaatt taaatgcaga agcaaatgta acagatacaa atttatcttt
     3241 tgattcttct aagatagaaa ccaaagcacc taaaatagag ctttctcttt ctagtcttta
     3301 tcaaaatgct gatgaggtgg taaaaggtgt tatttatata ttggttttat tttccatttt
     3361 agcatgggca gtttttattt ctaagcttat gcaattttat tttatgaaaa aaaatctaga
     3421 cttgtctata caaaagataa aagaattaaa aaatctcaat gaattagatc agacaaaaga
     3481 ttttgcaggt gttttatctt tagaaattca agatgagctt gaaaaaagtg aatataaaaa
     3541 tgatcacata aaagagcgta tagaattgcg tttgcaaaat accatctcaa agcaaatcac
     3601 agcaagcaaa aatggcttga gtttgcttgc gagcataggt gctagcgcac cttttatagg
     3661 gctttttgga acagtttggg gaattatgaa tgcatttata ggtatagcaa atcttggcaa
     3721 tgcttctttg gcagtcgttg cgcctggtat agctgaagcc ttgtttgcta cagcttttgg
     3781 cttgatagct gctatccctg cggtgctttt ttataattat cttacaagaa aaaatttaaa
     3841 acttatgcac catttagatg agcttgcaaa ttttgtctat atactttttc ataggagtta
     3901 ttttaatgat aaaaactgaa atggctcaca aagaagagga gttaagtgag atcaatataa
     3961 ctccttttat agatattatg cttgtattat tgattgtttt tatggctgtt actcctctta
     4021 tcacaagttc tatcaaaata gaattaccca agagttcgca gcaagcagag gataagctta
     4081 aaaatcccat catactttat ttaaatactg ataatacttt ggctattaat gatgataaat
     4141 taagcctaga aaatctttca agtgctttag atataaaaac caaaggcaat aaagaagaaa
     4201 ttatttattt tcatatcgat aaaagtgtaa agtatgaaga tattatgcaa gtaatgcaaa
     4261 aattaaaaga gaatggctat ggaaaaatag ctctttcaag taaaaagatg gattagtatg
     4321 aagtctagtg tgatttttgg gtttgtgtta agtttgatat tgcatacttt agtattaatg
     4381 tttttccttt tttcttttta tactcaagaa aaatcaagtg gtgttgattt taaacaagga
     4441 gcggaattta cttccattat gatggtatca gagcttccta tcggggaatt aaaagaagtt
     4501 tcgattgatc aaaaaaagag taattctcaa gataaaaaca aaaaacaaga cgaaagaata
     4561 agtcttaatt ctcaagataa aaatgctgta ttaaaagttc aaaaaaagat tgaaaagcaa
     4621 gatgaaaacc aagctcaaaa agaaatagct aatgcaagtg aaaattcaaa atttaaaaat
     4681 gaatcgctca gtgctccgct acaaagtaat gaagataaaa cacaaactat agtaagtggc
     4741 aatgccaaag aacaagttaa aagctatcaa gctttgctta tggctcattt gactaaattt
     4801 aaaaaatatc ctcaagaagc gataatacaa aaacaagaag gcgttgtaag aattcgcgta
     4861 agcattgatg aaagcggaaa tgtcttaagc aaagagctta aaaaatcttg cccttatgca
     4921 gcgctcaatg atgaagcttt aagtttattt aaaagagctt ctccattgcc aaaaccgcct
     4981 aaagaaatgt taaaaaatgg tgataaaatc agttttgtta tgcctattga ttacaatatt
     5041 aaagactatt taggtaaaaa ataaactttt cattaaaaaa agtttattag aatttttatt
     5101 ttaaaggtga tgattatgtt ctcttcgttt tttaaaagta aaaaatgggc tttatgggct
     5161 tatttaggac tttttttact cttatttttt cttttcattc aaacaagtct taatgttgct
     5221 ataaattcat ggtatagtga tttttacaat gttttacaaa agccaaaaat agaacttttg
     5281 gattctaatt ctacgcaaaa aatagaagaa aatcttgaaa ataatgccac tttaatccaa
     5341 gaggctaatc aaagagctga gcaaaatttc caaaaagcta attttatcaa taaaggcgca
     5401 ttgtattatt atcaaaattt attagaatat tttttcaact ctagggctat gattgaaaag
     5461 ccaaattatt cagcaagtga tttttatgct ttgattttag tttttttagc tattgctatt
     5521 ccttatgttt taatcgctac gattaatatc tattttgcta gtgtctatgc ttttaagtgg
     5581 cgtgaggcta tgactttttc ttatttaaaa ttttggaaaa ataaagatga taatatagaa
     5641 ggaagttcgc aaagaattca agaagatact tataattttt ctaaaatcgt agagagttta
     5701 ggacttagtt ttataaaagc tttgatgacc cttgtagcat ttattccgat tttatggagt
     5761 ttaagtgatg ttgtgagtaa agctttattt gcaaatttaa gcgaaaattc ttctttttat
     5821 tttttaaaaa acattgatgg tttgcttgtt tatattgcac ttttgatttc tttaggaggc
     5881 ttggttgtgt catggtttgt aggtattaaa ctacccggac ttgaatacaa taatcaaaaa
     5941 gctgaagcag cttttagaaa agagcttgtt tatgctgagg ataatcgcaa agaatacgct
     6001 aaaaatgaga ctatgataga gctttttaca gggcttaaat ttaactataa aagacttttt
     6061 ttacattatg gatattttaa tatttggctc attttatttg agcaaatgat agttatagtg
     6121 ccatttttaa tcatggcacc agggcttttt gctggagcta taggacttgg tattgtaatg
     6181 cagattaata atgcatttga tcaagtgcga agctctttta gtgtttttat cacaaactgg
     6241 acaactatca ctcaacttag aagtatatat aagcgtttaa aagaatttga gaaaaatatt
     6301 tcttataagt cttagttttt tcttataaaa tacaagaaaa aattcaaata ttaaatttac
     6361 ttttaattgt gtataataag gtttaataat attttatttc ttaaggagct tcattggacc
     6421 ccagtcaggt tttggattta aaccaaactt ctacagcatc ttttgatgca ggatattcta
     6481 tgcttatggt tgttgttgca cttgctctag tgtttttaaa tggttttttt gttttgtctg
     6541 aatttagtat tgttaaagta cgtcgttcca agcttgaaga gatggtaaaa gaaaaaaaag
     6601 ctggtgccaa gaaagctttg gaggttactt caaggcttga tacgtatctt agtgcttgtc
     6661 aattaggaat tactttaagt tctctagctc ttggttggat aggtgagcct gctattgcaa
     6721 aaatgctaga aattccactt attaatcttg gttttagcac tgttattatc catactatag
     6781 ctttcattat tgcttttagc attattactc ttttacatgt ggttttagga gaacttgtgc
     6841 caaaaagtat agctattgca gttgcagata aagcggtttt atttatagct agaccgcttc
     6901 attggttttg gatgctcttt ttgccttgta ttaaaatttt cgatttttta gcagctataa
     6961 gtttgaaact ttttggaata aaacctgcta aagaaagcga gctaactcat agcgaagaag
     7021 aaattaaaat catagcaagt gagagtcaaa aaggtggagt tttagatgaa tttgaaacag
     7081 agatcatacg caatgctgtt gatttttcag atactgttgc taaagagatt atgactccta
     7141 gaaaagatat gatttgtcta aataaacaaa aaagttacga agaaaatatg caaatcattt
     7201 gtgagcataa acatactcgc tttccttata ttgatggctc taaagatact attttaggta
     7261 tgatacacat acgagatata atacaaaatg aattaaacca taaaagtcaa aatttagata
     7321 cttttgttaa acctttgatt ttggttcctg aaaatatcag catttcaaaa gtacttgtaa
     7381 tgatgaataa agaacgctct catactgcat tagtagttga tgagtatggt ggaactgctg
     7441 gaattttaac catggaagat atcatggaag aaattattgg cgaaattaaa agcgagcatg
     7501 aagaagacag ctataaaaaa cttgctgaaa atatctatga atttcaagga cgatgcgata
     7561 tagaaactgt tgaagaaatg cttgtaataa actatgatga ggatttagaa caagttacta
     7621 taggtggtta tgtatttaat cttttaggac gcttgcctat ggtaggagat cgcattgaag
     7681 atgaactttg ttactatgaa gttaaaaaaa tggatgggaa ttctatagag cgtgttaagg
     7741 tggttaaaaa aacaaataaa gatgaagaat aagcctcttt aggcttattt ctttttgtaa
     7801 atttggtttt taatttctat acactcaaaa cctttttcat ctagtgtaac tacgcgtaaa
     7861 tatccaccat catctatttt accctcgcat aaaaatactc ttttggctat tttcatagga
     7921 agtttttctt tatttctgtg tccaaagatt tgataaagat tgtccgaggt gaaactacaa
     7981 aattgatttg ctactttttg actgtcttca tatccaccta caccataaat aaagtcatgg
     8041 cttggtataa aacttatttt ttcaggtttg gagggtataa aatttactcc tccatgtgaa
     8101 caaaatatga atttattttg gaatttgtag tataaacatt cttttagatg aggatagagt
     8161 tttctagcat ctcttggagt aagtttttct tttctaaaat cctttaaagt attttcatta
     8221 aattctttgg aatttgacaa ttctccatta gcccatttta taagatgtct ttcgtgattt
     8281 ccttctaata agcatacgtt ttctttttcg caaattttta aaagaaattt tattactttg
     8341 ccattttcta tacctctgtt gatataatct cccaaaaata tataaaattc atcttctttg
     8401 attgttttaa tgtattcttt taaaacacta tagcaacctt gtaaatctcc tatatgatga
     8461 atttttttgt atttgcttaa atttggcatt tggtaaagac attttttcca gtctcttgag
     8521 tctaaaattg ggtatttttt tggatttttt ttgagcaaat cttgagtttt ttccaaaaga
     8581 gcataaggaa tgatatatcc atttttttta gcttctaaaa gatttttttc ttgacattgt
     8641 tttaaagagc tatcaaaaac aataacatat attttatagc gatattgttt agctaagtct
     8701 ttataaattt ttaatgtttc gttgtaagcg tttatgatgc taaactcacc tttttgcata
     8761 cgcatttcta gaagtttgag taaaatttta ctcaaatctt catcattttt aacatttaaa
     8821 attttatatt cactgattat atttttaacg cttcctgata aaagacgcaa agcatttaaa
     8881 tcaagtgtat aattttgaag tttattattt ttgataaatt cttcttgtcc tgcgtaataa
     8941 ttccctctta aaacaagtaa gattcgcaca ttctttgcct agattttctt taaaaattca
     9001 gtttttaaaa caataacgcc aaatttatct actctagcct caatttcacc ttctttagaa
     9061 gtgagcttaa tattttttat agtagttcca cgttttaaag ttgtacttac acctttaacc
     9121 ttaagatctt ttattacact cacgctatca cctgtgttaa gttctattcc attagcgtct
     9181 ttagccattt ttttcctttc tttgatctaa aatatttaaa atttgcacca ctaaagcaaa
     9241 agccatagcg gtataaatat atgccttatc aatatgaata tcaaaacttt cagcaactaa
     9301 aactacgcct attagcacca aaaaagctaa ggctaaaatt ttaatgcttg gatatttttc
     9361 aacaaaatct gctataggtt tagaagcaaa aagcatcaca gctactgcga taataacagc
     9421 gataatcatg atggttacat cttgagcaat tcctactgcg gtaataacac tatcaagcga
     9481 aaacactatg tcaatcacag caatttcagc tacaactatc caaagtttat tgcttgcttt
     9541 aaaatgactt tgactttctt cttgatgaga aatttgctct ttaatttctt taatagactt
     9601 tacaatcaag aaaagcccac ctagtaaaag aactagatct cttcctgaaa tttcattgcc
     9661 caatacacta aacaaaggtg ttacaagttt cattacccaa aaaagagata aaagaagtaa
     9721 aattcttgta atcattgcaa aagctaaacc taagatacgt cctttatcac gatgttcagg
     9781 gggtagtttg cttactaaaa tagctaaaaa aatgatatta tctatcccta gtacaatttc
     9841 aagagcactt aaagtagcta aagtaatcca agcatcaata ctaaatatcc attcaaacat
     9901 aaatttcctt gaaaatttta aaatttttta aagcgatatt ttatagtttt aaagcaaata
     9961 cctttaattc tttaagaaaa aatttcaatc acacttaagg gtaaaatttc atgttctaga
    10021 ctatgaattt tttcttcaaa ttcttcaaaa ctcaaatttc ttttttcaaa agctttttga
    10081 gctataatca ttccaccatc aagttcttca ctgacccaat gcacactgac tccagccact
    10141 ttcatatcac tttcataact ttctttaatc gcatgtgctc ctttaaaaag gggtaataaa
    10201 gaaggatgaa ggttaattgc cttaatattt tttgtaaaaa caggacttaa aattctcata
    10261 aaacctgcta atacagtaag atttgctcca ctttctttga ttttttgtac caaaattgta
    10321 tcaaattctt cacgagtatt ataagcctta tgatcaacaa tgacagtatc aagaccaaat
    10381 ttttttgctc tttgtacacc aaaagcatct tttttattac aaatgcaaag tactacttca
    10441 taggtatttt cccctatggt ttttttatga agtttttcta aaatattttc taaattactt
    10501 ccatttccac taaaaagtac agctaatttt acaagcattt taatcctttg ataagtttta
    10561 aagcgtcaaa gctattttta ttaaatttat atttttttgc aacaagtcca tgagctaaag
    10621 tagcattttt tgctgcttct aaagcgctaa aaccaaaacc taaatgtgca gcaatcattc
    10681 cacttaaaac atctccactc ccacctttag ctaaggcttg atttcctaaa tttacaacaa
    10741 ataatttttc tttttgcaca ataataggat ttgctccttt taaaacaaga acacaatcat
    10801 aattttgtga aaattttcta gcatagaaaa agcgattttt ttgcaatgtt tctatatcta
    10861 aattctcatc aaagcacatt ttataaagtt ttataaattc ttttggatga ggggttataa
    10921 caacatcttt tctgtttaaa taccaaagca aagcttcact taaaaagcag tttgcatcca
    10981 agatcaaagg agtgttttgc aaaatttcat cttttagaaa atccaaattt tcaagcccca
    11041 tacctaaagc aatagcactt gcattatttt caattttttc ttttaacatc aaaagaggcg
    11101 agaaactttt ttgtgctact aaagaaacaa gacctgctcc aaaatttaag gctccaagtc
    11161 ctgctaaagt tccagcactt gcattggcaa ctatataaat atggccaaaa tttcctttat
    11221 tggcgttgat ttttctatct atagttttta aatctttttt ttcaagcaaa aaagcttgag
    11281 aattagggta aaatttctta gatctaatgc ctaaattggc tattttaatc cttcctacaa
    11341 attccttagc aaaatcttca agtaaaattt cctttaaagc tcccatacaa aatgtaatat
    11401 cagctttaaa acaaggataa aatcccaaat ttgtaggtat atcacaagct atttttaaag
    11461 ccttactttg attaactttt tgaataatta aacttgtttt ttcatctaaa caacgatttg
    11521 aacctgtacc taaaatacaa tcaatgataa tatgaaattt tttaaaattg ggttcttttt
    11581 tacaaaattt aaaagcataa ttttgtaaaa tttgctcttg ttttttaaaa agcgtatttt
    11641 ctttaaagcc tattttataa gctttagcgt gttttaaatt tcttaaagcc accaagccat
    11701 ctgaagcgtt gttacccccg cctaataaaa aaagtatttt tacttttcta atcttgcgtt
    11761 gaatgcgaat ttttttagct tcttttttaa ttagcttggc taaatttaat cccgcatttt
    11821 ccattaaaat aagctcatct aagcctttat ttatagcatt ttgttctaaa atttttatat
    11881 tatcaataat agctttcata atcttttttc accaaaaaat atatattttt ttctctttct
    11941 tcttcaaatt ttttcatttt gggtaaaaat ttctggatca aagcacgaaa attcttaaaa
    12001 ccataatttt gcggatgaaa atccgagtat ttgcggttca tattagtacg gatttgtgcg
    12061 tattcggcac gccctttttc atcgataagt tgttcggtga tattgattaa agctcttaaa
    12121 taatccttac ttaaaatatc ttctttttta ctctcatctt tatctaaata aaaaaattca
    12181 ctaaaggcat ttacataaga ttttatagac ttttcaagcc ccattcctat aacttgtttt
    12241 ttattttctc ttaatttttg aatgagtgaa gtataatcac tatcgcttga aacaataaca
    12301 aaaatatcta tatttttttc ataaaatatg gacataattt cagtgattaa atacatatcg
    12361 cttgagtttt tgttggctgc aaaattaaat tgttgcatag cgattaaaga atattcagca
    12421 atttgctctc tccaaccttg tatatttttt tgagtccaat ccccataaat gcgtttaatg
    12481 ataacctctc cgtaatctga agcgatatca aaaatacttt tagcgtattt tgcagggata
    12541 ttttctgcat ctataaagat agctatactt ttattttcca ttttaattcc ttgctctaaa
    12601 gcttaaagct tctaaaatat gggttttgct aatattaaga ctttgttcta aatccgctat
    12661 acttcttgaa acttttaaaa ttttattaag cgatcgcaaa gaaagattat aacgtgaaat
    12721 tgctaaatct agcgtatctt tggcatcttt ttccaataca caaaaacgac ttaaatcttc
    12781 atcttttaat ttcccattaa attctttttg cccccgtttt ttactaaaaa taaaagcttg
    12841 taaaattttt tcactcattt ctttagaact tatactcgtt ttatcatcct tgctgatctc
    12901 atccatagct acataaagat caatcctatc cataatagga gctgaaatgt gatttttgta
    12961 ttttttaatc tcattttcac tacaaacaca agaaagattt ttggagaata aatttccaca
    13021 aggacaagga ttttgggcag ctataaagct aaattttgtt tcataaatga ttttagaatt
    13081 tactcttgaa atatgaattt tatgatcctc taaaggttct cttaaactct ctatgatttg
    13141 cttgttaaaa tgtggaaatt catcaaaaaa caatactcca ccatttgcaa gtgcgacttc
    13201 tccaattcta gcattttttg ttcctccgcc aaaaatactt gctcttgtag aagtatgatg
    13261 aggatgacga aaagcacgaa ttttagtaaa ttcacaatct tttgaatcta aagacatata
    13321 agcattttgc attaaaattt catttaaact ttgaggaggc atgatataaa caaggcgttt
    13381 agcacacata cttttaccac ttcctggact tccttcaaat aagatattat gcatacctaa
    13441 agcagctatc atacaagctc ttttggcttt ttcctgccct ttgatgtctt taaaatcaag
    13501 tttaaaatcc atattttgta aaaaaatttc attttctatt tgtaaagggt ttgcaaataa
    13561 aggatgattg tgagaaaaac gaaaattttc ataatttttt tctttaaaaa actctattgc
    13621 ttcatttaaa ttttcaagtc cataaacctc taaatttggt atcatggaag ctttttgtgc
    13681 tatacttttt ggaacaacga tcttagcttt tttaatttta gcagagagaa acaaaagcaa
    13741 agaaaaaagc tcatttgtgc ttttaatact tccatcaagt cctaattctc ctactacaaa
    13801 aaagtcatct aattcttcat tttgcaaaag gattaataaa gcgatagcca aatcaaaatg
    13861 cgatcccttt tttgggatgc ctgaaggact aagattgata gtgatttttt tagcaggaaa
    13921 agcaaaatca caacttaaaa gtgtggcttt gatgcgttcg acactttcct taatcgctgt
    13981 acttgcaagc cctactatgc ttaaatttgg caaacctctt gtaaaagtgg attctacctc
    14041 tataatgtct aagccttcat gaaagcttat gcactttagt tttttcattt ctctttttta
    14101 tgatttttct tctttttctt aaattcttta tcgaattttt gacgcttagc aaaggaaatt
    14161 ttttctataa ataaatgtcc atttaaatga tcattttcgt gttgaatagc cacagctaaa
    14221 aaaccttttg cttcaagttc tttaaattct ccaaagcgat cttgatattt aagcaagata
    14281 tgattatagc gtttcacttc ttcaaaaaaa tctggcacac tcaaacagcc ttctgtgcaa
    14341 gtgatcattt cttcatctaa aggaataatt tcaggattga taatctctag caaatcttct
    14401 tttttttgtt catcgttttc atcaaaaata tttacaagta aaacacgcaa aggaatatcc
    14461 acttgaatag ctgctaaacc tactccatta cttgctatca tagtttcata catatcatca
    14521 agcaaggtgt gaagttctgt atcaaattta tttacaattt cagagtttaa aaaaagtcta
    14581 ggattgggat aggtgataat ttttctaacc attaaaaaac ctttgtttta aatgatctcc
    14641 aaagaaatca tttaaaactt ttttccaaaa ccttatcaat cagcccatat tctttagctt
    14701 cttgtgctga catgaaaaaa tctctttctg tatcttttgc tatttttgca actttttgct
    14761 tagtattttt tgccaaaata tcattaagta tagttttgag tcttaaaatt tctttggctt
    14821 gaatttcaat atctgtggct tgacctctag ctccacctaa aggttgatga atcataatac
    14881 gtgaattagg caaagcaaaa cgttttcctt ctgcgccaca actaagcaaa aatgctccca
    14941 tagaagcagc ttgtcctata caaatcgtac aaacatcagg tttgatatag ttcatagtat
    15001 cataaatact aaaaccactt gtaattacac cacctggaga attgatataa agataaatat
    15061 cttttgtagg atcttcagct tctaaaaaaa gaagttgtgc tacgatagaa gcggcaagtt
    15121 catcatgaat ttcaccactt agcataataa ttctatcttt taaaaggcgt gaataaatgt
    15181 cataacttct ttcaccacga ctagattttt caataacata aggaataaac attatttatc
    15241 ttctttctct tttttgctca ctttttccga tttttctgtt tttggtataa aaatatcatt
    15301 aaaaagtttt tcttcaatta aagccatttt cacagcaggc aaagctcctt gttttttata
    15361 gttttctaaa tgctcttttg gattcatacc atagcgatat gcttcaaaat aaatcgcttg
    15421 aatcaattct tgatcattta cttcaatctt acgcaatttt gcaagttcat caatgataaa
    15481 agtaagtttt acactttttt gtgcttcttc tttaaaagaa tcacgttttt cttgatattt
    15541 ttctttactt gctttaagct cttcaatttc tttttcgcta aaagtattaa aagccgcacg
    15601 catctgcata tcagtttctt gttctactat gcctttaggt aaatcaaaat tatatttttc
    15661 aatcaaagca tctgcaaatt tgccttttaa ttcatcattt acaagtttga aaagtttttc
    15721 atttttgatt tgctctttta atttttcatc taaaacttca acactagctt tttcttctcc
    15781 tggtaaaagt tttttaagca tttcatcatc aagttctgga attttaagct cttgaatttc
    15841 atgtagtttt actttaaata ctgcatcttt acccgctaaa tgcgctgcgc cgtattcttt
    15901 agggaaagtt actttgatat ctttttcttc acctattttc attcccacca taccatcttc
    15961 aaaacctgga ataaattgct tagaaccaat ttctaaaaca taattttcag ctttaccacc
    16021 ttcaaaagct ttatcatcta caaaaccttc aaaatcaaat tttgcaaaat caccttcttt
    16081 taaagctctt tttgttttta tagcttcagg agtagcaaaa cgctttaaaa gttcatcttt
    16141 tttctcatca atttcttttt tacttacttt tggagtttga tattcaggga tgagtttttc
    16201 ataaccctca agtttgattt caggtttaaa agaaagtatt aattcagcaa taatttctcc
    16261 atctttacga tcaaattttt caaaatatgg ctcacctaca agctctttat tttctttttt
    16321 aagttcttgt aaagcgctat ttacagcgga tttaaaaaga ttttgttctg catcttgagt
    16381 gagctctctt tcatatcttt taagtacggc acttacagga acttttcctg gtctaaaccc
    16441 atccattttt acacttttag aagctttttt tgctaaattt tctacttcac ttttgatcat
    16501 tcctgaagga atttttacac tagcagtcgc attaacagaa tctagttgct ttgcctttac
    16561 ttccatagtt tttttcctta taaaataaaa tttgctttca atcatagcaa atttttcctt
    16621 attacttgca taaaatttta aagtaattta tgataaaatt gcaatattac attattatta
    16681 aaatataaaa atatttttgg agaaaaattt gcaaaaaaaa tttgaagatt gtgttaaaac
    16741 catacttgaa attataggag aaaatccaaa tcgtgaaggg cttattaaaa caccaaatcg
    16801 tgtttttaaa gcttatgaat ttcttactag tggttatacg caaaatgtca aagacatttt
    16861 aaatgatgct ttatttgaaa gctctaataa tgaaatggtt ttggtgcgtg atatagaatt
    16921 ttatagtctt tgcgaacatc atcttttacc tttttttggg cgcgctcatg tagcctatat
    16981 ccctaataaa aaagtagtag gtttaagcaa aattccacgc cttgtagaag tgtttgcaag
    17041 aagacttcaa attcaagaac aacttactga acaaatcgca caagctttaa tggaaaatgt
    17101 tgatgcaaaa ggtgtgggtg tagtcataga agcaagacat atgtgtgttg aaatgcgtgg
    17161 aatacaaaaa gctaattcca ccactacaac ttcagcttta cgtggaattt tcttaaaaaa
    17221 tgaaaaaacc agagaggaat ttttttctct cataaactct gctaaacagg taagatttta
    17281 atgaatcttg aaaaactacg ctccaaactt ggtaaagaaa atttaagtgc tatctttgga
    17341 gagattacaa aaatttctgc tacgagtata gaaattcgtg ggcttaaaac aggggttgga
    17401 gatatagtga agctagtttc caatgaaaat gaaaatttaa acactctagc tatggtcgta
    17461 gaaatcaagg aacaatttag ctatttaagc cctttttctt ttatagaagg tttcaaaata
    17521 ggcgatcgtg ctttcataag tgatgcaggt atgcaaatag gcgttagcga tgaactttta
    17581 ggcagagtag tagatccttt tatgcgccca aaagatggta aaggagctat agaagtaacc
    17641 aaatatatgc ctataatgcg tgcacctatt gatgccatga aaagagggct tatagaagaa
    17701 gtttttcccg tgggtgttaa aaccatagac gcgcttttaa cttgtggtgt aggacaaaaa
    17761 cttggtattt ttgcaggaag tggggtagga aaatccactc ttatgggaat gatagttaaa
    17821 aattccaaag ctcctataaa agtagtggca ctcataggag aaagggggcg tgaaattcct
    17881 gaatttatac aaaaaaattt aggcggaaag ctcgatgata cagtgattat tgttgctaca
    17941 agtgatgata gtgctttgat gcgtaaatat ggtgcttttt gcgcaatgag tgtggcagaa
    18001 tactttaaag aacagggcaa agatgtactt tttatcatgg atagtgtaac gcgttttgct
    18061 atggcacaaa gagaaattgg actagctctt ggagagcctc ctacaaccaa aggttatcca
    18121 ccaagtgttt taagtctttt gcctcaactc atggaaagaa ccggtaaaga agaaggtaaa
    18181 ggcactataa cagccttttt taccgtttta gtggatggtg atgatatgag cgatccaatc
    18241 gccgatcaaa gtcgttctat cttagatgga cacattgttt taagccgtga attaacagac
    18301 tttggaattt atcctcctat taatatacaa aactctgctt caagggtgat gagtgacatt
    18361 ataagtcctg aacataaact ttgggcaaga aaatttaagc gtttaaactc gcttttaaaa
    18421 gaaaatgaag tattgcttcg catcggtgct tatcagaaag gaagtgataa agaacttgat
    18481 gaagctattt ctaaaaaaga atttatgcaa aaattcttag gacaaaatcc tgaagaaagc
    18541 ttcgaattta atcaaacttt agagctttta agtcaaattg atacaccaaa tactcctttg
    18601 ccaccaactc aaaatataaa tgtaggaagt gcaagtgcaa ctttgcctaa tcctaattta
    18661 aaataaaatt atttaataaa ataatctcca tcaaaactga ttaaagaata tttcctttca
    18721 tcgcctatgc tttgagttag ctcttctatg cttaaaaaac ttagcgtatc agcttctaca
    18781 tattcacgca cttcttcagc atttttattt gcactgataa gttcttcaaa agttggagta
    18841 tctatgccat aagtatcagg aaatttgatc tcaggacaag ctatggcaag atggattttg
    18901 ctcgctcctg cagcacgaag caaagaaatt atttttttag aagtagtgcc acgcaccaag
    18961 ctatcatcaa tgactacgat ttctttgcct tctaaaactt tacgcatagg attaagtttt
    19021 aattttactt ttaaatttct aagctcttga gttggctcta taaaagttct tcctacataa
    19081 tgatttctta ctattgccat ttcaagaggg atttgtaaat attgcgcaaa acctatagct
    19141 gcacttactc cactatctgg cacaggcacg acaaagtctg ctttataagc aaatttttta
    19201 gctaaagctt cgcccatttt tttacgcact tcatacacgc ttttgccttc tactatacta
    19261 tcaggtctag caaaataaat gtattcaaaa gcgcaaattc taggagtttg agaaaaaagt
    19321 tctatgcttt caaatttatc atttccctga gtaaaaataa gcatttcccc tggtttaaca
    19381 tcacgaataa attcagcctc tataagatca aaagcacaag tttcactagc aactatatag
    19441 cctccatctt ttaaacgccc taaagacaaa ggacgcaccc catgaggatc tcttacaaca
    19501 taaagtttat ctttgcttgc taaaacaaaa caataagctc ctatacattc ttttaaactc
    19561 tcaataaatc tatcttttag actttcttgc ttacttcttg cgataagatg gacaacattt
    19621 tctgtatcca tattggtttg aaaaatagcc ccatcttgaa taagtcttga tcttacctct
    19681 tctttattga ctaaatttcc attatgcgct aaagcaatat cacctaaaac cgaagtagct
    19741 gctatgggct gagcgtcatt taaacttgaa tttcctgctg tagaatagcg attatgccct
    19801 atagcgattt caccttctaa agtttttaaa ttatcgggat taaaaatttg actcacttca
    19861 cctttagctt taatagtctt aatattttta ccattactca cactaatacc acttgcctct
    19921 tgcccacggt gttgcatagc aaaaagtgca taatacgcat aagtactagc attttttgaa
    19981 ttaataactc ctacaactgc acacatttta aattcctaaa aaatcattga ttgaatacat
    20041 ttttgcttct tgcttactaa gccaaatagc gattttaatc gcacctttag caaaagtcgc
    20101 ccttgaagta gcggtatgat taagttctaa aaattctcca tcttcataaa aacctactgt
    20161 atgacgtcct actatatcgc caccccttaa actcatcacg gcaatctcat ctttgcttct
    20221 ttcacctata atgccatctc ttccacttac tcttactttt tcaagttcta aatttctagc
    20281 ttttgctaca ctttgagcta aagtcatagc tgtaccactt ggtgcatctt ttttatggcg
    20341 atgatgcatt tctaaaattt ctatatcaaa atttcttagc atttgactgg ctttactagc
    20401 aagatagttt aaaaccgcaa cacctaaaga catattggtc gcataaaaaa tcggcatcac
    20461 ttcactagca ctttgcatca aatgtaaaat tttttcatca agccctgttg tacctattac
    20521 caaaggttta ggtatagttc ttgcataatt taaaagctca tgagttccac ttggggaaga
    20581 aaaatcaata atcacatcgc ttttttcaaa aagctctcct aaatttccac ccttatcata
    20641 aagtatcgaa atttgtgctt gtgtttcgct ttttaaacat tcttcaatct gttttcccat
    20701 tcgtccttta gcgccataaa ttcctatttt aatcatcttt ttccttgaaa ataaaatatt
    20761 gattttagca tttattttgt aaattttaaa taataaaatt aagctttatg gttttttaat
    20821 ttatataaat tatctaacaa ttttgcttct tctcctaagc ccttgctatg ataaaatttt
    20881 aaatttttac taagatattt ttgctctacc cagccaccaa aatcatgtgg ataaagatag
    20941 ttttgttttt cttgatgatt gttgttaaga taattaggta tttctaaagc ttcattattt
    21001 tttacatagt ttaaagcttc attgatagct ttgtagcttg cattagattt gattgtgctt
    21061 gctaaataaa ctacgcattg ggctaggata attcttgctt caggataacc tatattttta
    21121 acagcctcta gagtcgaaac cgctaaattt aaagcatttg gatcggcatt tccgatatct
    21181 tcacttgaaa aaatcaccaa acgcctagcg ataaaatccg cactttctcc tgcatcaata
    21241 agtcttgcaa gataataaat agctgcatca acgtcacttc cgcgtaaact ttttatcatt
    21301 gcactcgcta aaatataatg tgtatctttt gagctaacac cttcactatt tatggtgttg
    21361 cgaagttttt taagattttc aagactgata tgtttttcat ctaaaaccaa gacaaattca
    21421 agcaaattta gcatagctct tgcatcagca cttttcagta gaaaatcttt agcttcttta
    21481 tcaatactaa atttcatttt ttcttgtaca cgcaagagta aagtttcaag ttcctttacc
    21541 cctaaagatt taaattcaaa aagcatggaa cgacttctta taccagaact taaaacaaaa
    21601 tagggatttt cagtgcttgc gccgattaaa attaaacggt aattttccat aggaattaaa
    21661 agcatttctt gttgggtttt gctaaggcgg tgaatttcat caataaaaat taaaggctta
    21721 taaagactat ttttataatt atctaaaatt tttcttagtt cttcgagttt aaaatttcct
    21781 ccatcaaatt cataaaaatc taagccaaat tctttggcta caactctagc aaaagttgtt
    21841 tttccagaac ctgccgttcc aaaaaaaata ctatgaggaa gtttttgtaa agcagtaaat
    21901 tttttgaaaa tttctgtaag ctcatattgt cctaaaatat cgtcaaaatt ttcagggcga
    21961 aaggtcaaag ctaggctcat taatttaaat ccatatttga aaattcacta ccattaattt
    22021 ttagttgagg attggctaag ctatcataag ataaatttag aaaaaagtta ttattttctt
    22081 ttaaaaaata ttgatttaaa cctccataat cttttgtcca aggaaaaatt tcatcaggct
    22141 catctgaact gataacttgt aattttgctt gataagagtt gttaatattt aaattgcctt
    22201 gtagactgat attttgttta tttttttcaa gaattaaatt ttgtatttct agatcaagat
    22261 ttttttgaat aaaatgagag atattgaaat ttgagtt
//
LOCUS       DAPIWB010000027        21195 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.028, whole genome shotgun sequence.
ACCESSION   DAPIWB010000027 DAPIWB010000000
VERSION     DAPIWB010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21195)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21195)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21195
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.028"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            110..1003
                     /gene="msrP"
                     /locus_tag="RJ266_000821"
     CDS             110..1003
                     /gene="msrP"
                     /locus_tag="RJ266_000821"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HDV7354584.1"
                     /translation="MLITPEKLYKQRRNFLKLGAGALISSSVLASKLSALNFTSDTNP
                     NKLEISDEELATNYVNFYEFSTDKRKAVSLAQNFNTQNWKIDISGEIEKPLTLSMEDI
                     LKFPLEERIYRFRCVETWSMVVPWVGFELRRLIEMAKPTSEAKFVKFTTLLDKSQFPD
                     QDALFPTIDYPYVEGLRMDEAMHPLTLLAVGMYKKALKPQNGAPIRLVVPWKYGFKSI
                     KSIVKIEFTKEQPKSTWESYAPSEYGFYANVNPNVSHPRWSQANERALGDFFTKPTLM
                     FNGYEKEVASLYKNMDLKVNF"
     gene            1003..1542
                     /locus_tag="RJ266_000822"
     CDS             1003..1542
                     /locus_tag="RJ266_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase heme-binding subunit YedZ"
                     /protein_id="HDV7354585.1"
                     /translation="MQTKYFKFLAYFSFIISLIYGFYHIIKAFDFVKEAYIYTGIFAL
                     IFLNLSLLFSLLKFKKTKNYPKILGIFAAFWAILHFLNYFIFDRNAQILRLFDDISHR
                     LLEAIGFIAFLIIFLMLLSSFKIFKKLSKIRKLGYLCLILASYHYFLTPKIPMFWEWS
                     ALIIALFYFIVRYTKTLKS"
     gene            complement(1539..3251)
                     /locus_tag="RJ266_000823"
     CDS             complement(1539..3251)
                     /locus_tag="RJ266_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7354586.1"
                     /translation="MEKLKNFLSLKNIEDTQIYKELKCAKNEALILRELCRNYVVSIS
                     SINAFTLLSTIFGNDKYLYLDALEDLKKLIERGFVNQNSSFFKSLENNKTQTLTLALL
                     QSELSLSEYFLEFLEAKPRLNFEKQEAYADYLEYLKDEFARIQLYERLSFIQKSAYNS
                     EIKNQIKLYERHIKERLKKSKFYNVLADIFKEYNLEHKEQIIFLALLKEEYALSNESS
                     ISREMNSLLSLISENDLERHKNKKLLQENAPLLNLIEYDEYLNAFGDISKSFFIIDEI
                     LQRIINFEPKQSKKIKIESVLKDQDIFELIEPSADINDIIMPENTKELLENILKQQDK
                     KVLERLHSWGIKSNKNIEAKIIFYGPAGTGKTMSALAMAKSMKKPVLSFDCSKILSKW
                     VGESEQNVRKIFDTYKNIVQTCKQSPILLLNEADQFLSTRVDGSSGSDKMHNQMQNIF
                     LEQIERFSGVIIATTNFLESLDSAFSRRFDYKIEFKKPDFKDRLKIWEKFLPKKALFE
                     KDFNINILSNYELSGAQILMVVKNTALKVAVSQDGVFKMQDFIESIQKELNSSFDKSK
                     IVGF"
     gene            complement(3251..4075)
                     /locus_tag="RJ266_000824"
     CDS             complement(3251..4075)
                     /locus_tag="RJ266_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354587.1"
                     /translation="MKFFLLVFCFVNLALAQVYKGELYFYHLQDKEIFAIVYDNAPMT
                     PLFDRDKNQTSSSFLIIDDINGNLEIPLVKINDFWQDECKKYKINSSKMLTYDNKNFQ
                     GENLGTTTLELVETQDGIRIKRSLDFIGFNDDFKEFHPVHKGVFSFEQIHQKPIFLQD
                     GKISFEEWYYFYEDGMSRAILELNNFVYDINAHAFVKLNDLYNTENQKFQNLLHEKLK
                     NTCDECFEDLQNLQFNNNFLLNNGKLKICYLPFEGHFLDENICVEFNEDELKEFKK"
     gene            complement(4086..4562)
                     /locus_tag="RJ266_000825"
     CDS             complement(4086..4562)
                     /locus_tag="RJ266_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354588.1"
                     /translation="MKHCLALCFVFFLCACSVKNQNFSSQSLMVLIASPMIKINDTAF
                     LKKENNALNLEVYKLGQAFFELKIKDKICINVVCYDKQVFNQKFFKNVYYDDILSDIL
                     KANPLWQGKNLEKTDCGFEQNLKAKNYEIFYQVCDNKVSFFDKISHTKIILTHIQN"
     gene            complement(4571..5062)
                     /locus_tag="RJ266_000826"
     CDS             complement(4571..5062)
                     /locus_tag="RJ266_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HDV7354589.1"
                     /translation="MASEHSFDISAALDKQELKNAFEQAKKELDSRYDLKGIKCEIDL
                     SEKESIFKLSSSSEGKLDVLKDIVISKLIKRGINPNAIKELSRESGAMFRLNLKANDA
                     IDSENAKKINKVIKDSKLKVNSSIRGEEIRVAAKQIDDLQAVMKLVKELDLELNISFK
                     NLK"
     gene            complement(5052..5987)
                     /locus_tag="RJ266_000827"
     CDS             complement(5052..5987)
                     /locus_tag="RJ266_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HDV7354590.1"
                     /translation="MKIVCLDAATLGDYDLSVFEKFGSLQIYTTTNKEQTIERLKDAN
                     VAMTNKVVIDKDVIDACKNLKLILETATGVNNIDIEYAKEKGIIVKNAAGYSTMSVVQ
                     HTFAFMFAFLNQVLYYDKWSKEGKWCESPIFTDYSRILNTLSGKKHGIIGLGTIGKEV
                     AKISKAFGAEIYYYSTSGANKNADFVHLELKDLLKTCDIISIHAPLNEKTKNLLAFEE
                     LKLLKDNAILINVGRGGIVNENDLAKIIDEKNIRVGLDVLEIEPMMKNHPLLSIKNKE
                     NLIITPHVAWASKEALNALMDIVYNNLKEWIENGK"
     gene            complement(5990..7159)
                     /locus_tag="RJ266_000828"
     CDS             complement(5990..7159)
                     /locus_tag="RJ266_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HDV7354591.1"
                     /translation="MQLLQVDKLQKDYLENIGFSWHTDEDGSDYISNKLVCVKESEAN
                     AYYEAVNELYDMFIAAAQEVINNDRFDELGIPFNLIDAIKMSWENEVHWHLYGRFDLA
                     GGLDGKPIKLIEFNADTPTALFESAILQWALLKQNGMDESAQFNSIYESLMDNFKRLI
                     TLDESVEGFEEHYQGWKILFSSVAGSKEEEITTKLLAHIANEAGFQTNFSFVDEVEFS
                     EEGIFKEGENYEYWFKLIPWEDIAIEEGELAMLLTQIMRNQRAIILNPAYTLLFQSKG
                     ILKILWELYPNHPLLLETKDTPLEGKNYVKKPVFGREGANISIIKDGKTLHENVGPYG
                     NNKAIYQEYVEFNSCENEYYQAGVFFAYEGCGLGFRKGGLVLDNYSKFVGHIIKD"
     gene            complement(7169..7774)
                     /locus_tag="RJ266_000829"
     CDS             complement(7169..7774)
                     /locus_tag="RJ266_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0323 family lipoprotein"
                     /protein_id="HDV7354592.1"
                     /translation="MKKIKKIIQIGMIGGLAAVAGGALAGCGSNNDNADTLNQAANAQ
                     GAFVIIEETAPGQYKIKDQYPSDETRVVLKDLNGTERILSKEEMDALIKEEAAKIDNG
                     TSNLTKDNGQISSGGLSLGETLLASAAGAILGSWIGSKLFNNQNFANQQRGAFSNQSA
                     YQRSVNSFNKAGTTSSASSAKKSGFFGGGSKATSSSSSFGS"
     gene            complement(7894..8106)
                     /locus_tag="RJ266_000830"
     CDS             complement(7894..8106)
                     /locus_tag="RJ266_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HDV7354593.1"
                     /translation="MPGIKVHPNESFDEAYRKFKKQVDRNLVVTEVRARRFFEPMTEI
                     RKKQKISARKKMLKRLYMLRRYESRL"
     gene            8266..9642
                     /gene="ccoG"
                     /locus_tag="RJ266_000831"
     CDS             8266..9642
                     /gene="ccoG"
                     /locus_tag="RJ266_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HDV7354594.1"
                     /translation="MQGHITNYTKKRYFVYLIASIIIFSLPFIRINENHFFLLSFDHS
                     KLNLFFISFSTQEFYLMPFVLIFLFLFIFFITTLGGRIWCAWSCPQTIFRVIYRDIIQ
                     TKFLKIRKNINNKQKEYERQYFKKFLGVIIFYFISLVAVSNLLWYFIPPEDFFNYIQN
                     PGEHLLLLGILFCASLLFTLDITYLQEKFCVYVCPYARIQSVMFDHDTMQVIYDEKRG
                     GLIYDGHTKLHKKPPEGECIGCEACVSICPTHIDIRKGMQLECINCLECADACSKVQS
                     KFNRPSLINWTSAKAIETRSKVHYLRFRTIAYFIVLLIALLALIIMGSKKESMLLNIN
                     RSSELYNISNVKGELVISNAYTFLFQNTDSKPHEYYFTANLEGINDGIEIIRPNKPFK
                     LKAGEQVKKIVVIRATKNLANNDKKDVIFPLHIKAYAKDNEKISVFRKSIFVYPKSTL
                     IKDKNELK"
     gene            9629..10261
                     /gene="cmeR"
                     /locus_tag="RJ266_000832"
     CDS             9629..10261
                     /gene="cmeR"
                     /locus_tag="RJ266_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     regulator CmeR"
                     /protein_id="HDV7354595.1"
                     /translation="MNSNRTPSQKVLARQEKIKAVALELFLTKGYQETSLSDIIKLSG
                     GSYSNIYDGFKSKEGLFFEILDDICKKHFHLIYSKTQEIENGTLKEILTSFGLAFIEI
                     FNQPEAVAFGKIIYSQVYDKDRHLANWIENNQQNFSYNILMGFFKQQNNSYMKKNAEK
                     LAVLFCTMLKEPYHHLNVLINAPLKNKKEQKEHVEFVVNVFLNGINSSKA"
     gene            10356..11459
                     /gene="cmeA"
                     /locus_tag="RJ266_000833"
     CDS             10356..11459
                     /gene="cmeA"
                     /locus_tag="RJ266_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit CmeA"
                     /protein_id="HDV7354596.1"
                     /translation="MKLFQKNTILALGVVLLLTACSKEEAPKIQMPPQPVTTMSAKSE
                     DLPLSFTYPAKLVSDYDVIIKPQVSGVIENKLFKAGDKVKKGQTLFIIEQDKFKASVD
                     SAYGQALMAKATFENASKDFNRSKALFSKSAISQKEYDSSLATFNNSKASLASARAQL
                     ANARIDLDHTEIKAPFDGTIGDALVNIGDYVSASTTELVRVTNLNPIYADFFISDTDK
                     LNLVRNTQNGKWDLDSIHANLNLNGETVQGKLYFIDSVIDANSGTVKAKAIFDNNNST
                     LLPGAFATITSEGFIQKNGFKVPQIAVKQNQNDVYVLLVKNGKVEKSSVHISYQNNEY
                     AIIDKGLQNGDKIILDNFKKIQVGSEVKEIGAQ"
     gene            11459..14581
                     /gene="cmeB"
                     /locus_tag="RJ266_000834"
     CDS             11459..14581
                     /gene="cmeB"
                     /locus_tag="RJ266_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit CmeB"
                     /protein_id="HDV7354597.1"
                     /translation="MFSKFFIERPVFASVVAIIISLAGAIGLTNLPIEQYPSLTPPTV
                     KVSATYTGADAQTIASTVASPIEDAINGADNMIYMDSTSSSSGTMSLTVYFDIGTDPN
                     QATIDVNNRISAATAKMPDAVKKLGVTVRKTSSTTLAAISMYSSDGSMSAVDVYNYIT
                     LNVLDELKRVPGVGDANAIGNRNYSLRIWLKPDLLNKFGITATDVISAVNDQNAQYAT
                     GKIGEEPVTQKSPYVYSITMQGRLQNPSEFENIILRTNNDGSFLRLKDVADVEIGSQQ
                     YSSQGRLNGNDAVPIMINLQSGANALHTAELVQAKMQELSKNFPKGLTYKIPYDTTKF
                     VIESIKEVVKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSI
                     NLLTLFALILAIGIVVDDAIIVVENIDRILHENEQISVKDAAIQAMQEVSSPVISIVL
                     VLCAVFVPVSFISGFVGEIQRQFALTLAISVTISGFVALTLTPSLCALFLRRNEGEPF
                     KFVKKFNDFFDWSTSVFSAGVAYILKRTIRFVLIFCIMLGAIFYLYKAVPSSLVPEED
                     QGLMIGIINLPSASALHRTISEVDHISQEVLKTNGVKDAMAMIGFDLFTSSLKENAAA
                     MFIGLKDWKDRNVSADEIAMELNKKFAFDRNASSIFIGLPPIPGLSITGGFEMYVQNK
                     SGKSYDEIQKDVNKLVAVANQRKELSRVRTTLDTTFPQYKLIIDRDKLKHYNLNMQDV
                     FNTMNATIGTYYVNDFSMLGKNFQVNIRAKGDFRNTQDALKNIFVRSNDGKMIPLDSF
                     LTLQRSSGPDDVKRFNLFPAAQVQGQPAPGYTSGQAIEVIAQVAKETLGDDYSIAWSG
                     SAYQEVSSKGTASYAFALGMIFVFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLR
                     GFSNDIYFQTGLLLLIGLSAKNAILIVEFAMEERFKKGKGVFEAAVAAAKLRFRPIIM
                     TSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVPLFFYLLENFNEW
                     LDKKRGKVHE"
     gene            14574..16052
                     /gene="cmeC"
                     /locus_tag="RJ266_000835"
     CDS             14574..16052
                     /gene="cmeC"
                     /locus_tag="RJ266_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit CmeC"
                     /protein_id="HDV7354598.1"
                     /translation="MNKIISISAIASFTLLISACSLSPNLNIPEANYSIDNKLGALSW
                     EKENNSSITKNWWKDFDDENLNKVVDLALKNNNDLKLAFIHMEQAAAQLGIDFSSLLP
                     KFDGSASGSRAKTAINAPSNRTGEVSYGNDFKMGLNLSYEIDLWGKYRDTYRASKSGF
                     KASEYDYEAARLSVISNTVQTYFNLVNAYENENALKEAYKSAKEIYRINDEKFQVGAV
                     GEYELAQARANLESMALQYNEAKLNKENYLKALKILTSNDLNDILYKNQSYQVFNLKE
                     FDIPTGISSTILLQRPDIGSSLEKLTQQNYLVGVARTAFLPSLSLTGLLGFESGDLDT
                     LVKGGSKTWNIGGNFTLPIFHWGEIYQNVNLAKLNKDEAFVNYQNTLITAFGEIRYAL
                     VARKTIRLQYDNAQASEQSYKRIYEIAKERYDIGEMSLQDYLEARQNWLNAAVAFNNI
                     KYSYANSIVDVIKAFGGGFEQSEDTSKNIKEESKNLDMSFRE"
     gene            complement(16075..16326)
                     /locus_tag="RJ266_000836"
     CDS             complement(16075..16326)
                     /locus_tag="RJ266_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354599.1"
                     /translation="MDKAKIVQNLNALFKQRAEFYSYFDENIAKINNTEVFDFKNAKN
                     LNPEEVYKQFYHFDYAIRKLLPAIYKAYEITDADLDKDF"
     gene            16455..17801
                     /locus_tag="RJ266_000837"
     CDS             16455..17801
                     /locus_tag="RJ266_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HDV7354600.1"
                     /translation="MNLFQNLALKYSHTMMEKSLQKGFNVELLKQPEEKIPKQDKSYM
                     LYAHVPFCHTFCPYCSFHKYYYDENLAKVYFQNLREEIKIMKNKGFDFTSMYVGGGTT
                     LIDEEELLKTLELCKKLFNIKEISCESDPNHIDPNKLSMFKGIIDRLSCGIQSFDDET
                     LKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQNEKQLLNDLEIAKNLAP
                     QQITTYPLMKSNLTKDNIAKSLGVSIKDNEFTYYQIIREFFKDYTQNNGWSFSLEKNK
                     LNDEYVSSHHEYLGVGSGAFSFLDGELLINAFNLNDYAKFIQEKQNANIAKACFDKKE
                     IIKYVFLTEIFSGKIEIDKFNKTLNCNLEKELFIELLGLKTSGAIIKDQNALIATEFG
                     QYLFVVLMKDFYTGMDLVRAVFRDDKRLKNKDYIDIMKENIDPLNSASMEFKAETN"
     gene            complement(17798..18250)
                     /gene="hemJ"
                     /locus_tag="RJ266_000838"
     CDS             complement(17798..18250)
                     /gene="hemJ"
                     /locus_tag="RJ266_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase HemJ"
                     /protein_id="HDV7354601.1"
                     /translation="MTEWINDYYFWIKWVHYLAFVSWMAGLFYLPRLFVYHAEHKDNK
                     GFVEVVKIQERKLYYYIQTPAMIVTLITGSLMLHAHKEVLMVGAGFMHVKLTCVTLLI
                     IFHIHNYYCLKALANDTSTKSGKYFRIYNEFPTIMFIIIALMMVVRPF"
     gene            complement(18234..18704)
                     /locus_tag="RJ266_000839"
     CDS             complement(18234..18704)
                     /locus_tag="RJ266_000839"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HDV7354602.1"
                     /translation="MAKTFKFIFYFWGAFVLVFALDQWVKSLTLAGFRWQSEYLDLTY
                     ALNTGVAFSMLSFLEHNLKYLHLALIGVLFIYLFWQRTLLKTHSIAFGMMLGAGVSNL
                     LDRFIHGGVVDMFFWHKWFNFAIFNVADVMINISVALILIQEIFKKRKKDDRMD"
     gene            complement(18697..20034)
                     /locus_tag="RJ266_000840"
     CDS             complement(18697..20034)
                     /locus_tag="RJ266_000840"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HDV7354603.1"
                     /translation="MRLFGTDGVRGKAGEFLDSFLAMRLAMAAGIYFKDKSITNNILV
                     GKDTRRSGYMIENAIVSGLTSIGYNVIQIGPMPTPAIAFLTEDMRCDAGIMISASHNP
                     YYDNGIKFFDAHGNKLSEDIEKKIEEIYFDDKLIQASKVDMEKIGQAKRIDDVIGRYI
                     VSIKNSFPKDLTLKSLRVVLDVAHGAAYKVAPTVFKELGAEVIVMSDKPNGLNINENC
                     GALHPVNLAAEVKRLRADVGFAFDGDADRLVVVDEKGEVANGDSLLGVLALYLKEQGK
                     LQSSVVATIMSNGALKEFLNKHGIELDTCNVGDKYVLEKLKANGGNFGGEQSGHIIFS
                     DYAKTGDGLIAALQFSALMLSKKKSASSILGQVKPYPQLLINLKIAEKKDLDKIKGLK
                     ELKKDLENKNINTLFRYSGTENLIRLLLEARDIKLLEKEMKNVVEFFKKALNG"
     gene            complement(20128..21153)
                     /locus_tag="RJ266_000841"
     CDS             complement(20128..21153)
                     /locus_tag="RJ266_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HDV7354604.1"
                     /translation="MKVKALLIASLVAFSSLNAASLIDEAKNSGLVALPKDQKGVDEI
                     LKQNGVKASEFTLEKAELGKKLYFEPRLSKSGIISCNTCHNVGLGGTDGVSTAIGHKW
                     TANPHHLNSPTVYNAVLNNTQFWDGRAGTLADQAKGPIQADPEMATPAKLAVEKISSL
                     PEYVSEFKKIYGKSGVNFDNIADAIANFERTLITPSRFDKFLEGDEKALTKEEQKGLK
                     LFIDKGCVACHNGVNLGGNMQAFEVAGKYKFANLGDFKGDANGMVKTPTLRNVAETAP
                     YFHNGAIWNLKDAIKEMGSVQLGIKISDKEAKSIETFLKSLTGTKPAIVYPQLPISTE
                     KTPKPEL"
BASE COUNT         7438 a         3462 c         2890 g         7405 t
ORIGIN      
        1 ttttgcgaag aaatattcta caatatagaa cttgaaaaaa tcacacaaaa ttaatcctgt
       61 attaacattg ttatagttta ataataaaaa tttttaataa ggaaaaatta tgcttataac
      121 acctgaaaaa ctttataaac aaaggagaaa ttttttaaaa cttggagcgg gtgctttaat
      181 aagttcaagc gtgcttgctt ctaaactatc tgctttaaat ttcacaagcg atactaatcc
      241 aaacaaactt gaaatcagcg atgaagaact agctacaaat tatgtcaatt tttatgaatt
      301 ttcaacagat aaaagaaagg ctgtatcatt ggcacaaaat ttcaatactc aaaattggaa
      361 aatcgatatc agtggagaaa tagaaaaacc tttaacttta agcatggaag atattttaaa
      421 atttccacta gaagaaagaa tttatcgttt tcgctgtgtt gaaacttggt ctatggtggt
      481 accttgggta ggctttgaat tgcgtcgttt gattgaaatg gcaaaaccta caagcgaggc
      541 aaaatttgtt aaattcacca ctcttttaga taagagtcaa tttcccgatc aagacgcttt
      601 atttccaact atagactatc cttatgtaga aggacttcgc atggatgaag ctatgcatcc
      661 tcttaccttg cttgcagtag gaatgtataa aaaagcctta aagcctcaaa atggcgctcc
      721 aatacgtctt gttgttcctt ggaaatatgg ctttaaaagt attaaatcta tagttaaaat
      781 agaatttact aaagaacagc ctaaatccac ttgggaaagt tacgctccaa gtgaatatgg
      841 tttttatgcc aatgtcaatc ctaatgtttc tcatcctaga tggtctcaag ctaacgaaag
      901 ggctttagga gacttcttta ccaagcctac tttaatgttt aatggttatg aaaaagaagt
      961 ggcaagttta tataaaaaca tggacttgaa agtgaatttt taatgcagac aaaatacttt
     1021 aaatttcttg cttattttag ctttatcata agtttaatct atggctttta tcatatcata
     1081 aaagcctttg attttgtaaa agaagcctat atttacaccg gaatatttgc tttaatcttt
     1141 ttaaatttaa gtcttttatt ttctttactt aaatttaaaa aaacaaaaaa ttatcctaaa
     1201 attttaggta tttttgcagc tttttgggcg attttgcact ttttaaatta ttttattttt
     1261 gatagaaatg ctcaaatttt aaggcttttt gatgatattt cacatcgttt attagaagca
     1321 attggattta tcgcattttt aatcatattt ttaatgcttt taagttcttt taaaatcttt
     1381 aaaaaactta gtaaaatcag aaaactggga tatttatgct taattttggc aagttatcat
     1441 tattttttaa ccccaaaaat tcctatgttt tgggaatgga gtgctttaat tatagctttg
     1501 ttttatttta tagttcgcta tacaaaaaca ttaaaaagtt aaaatccaac aatcttactt
     1561 ttatcaaaac ttgaatttaa ttctttttgt atactttcta taaaatcttg cattttaaaa
     1621 accccatctt gtgatacagc tactttcaaa gctgtattct tcaccaccat taaaatttgt
     1681 gctccgctta attcataatt tgataaaata tttatattaa aatctttttc aaataatgct
     1741 tttttaggta gaaatttttc ccaaatttta agcctatctt taaaatcagg ttttttaaat
     1801 tctatcttat aatcaaatct tcttgaaaat gcactatcta agctttctaa aaaatttgtc
     1861 gtagcgataa tcacaccact aaaacgctca atttgctcta agaatatatt ttgcatttga
     1921 ttatgcattt tatcactacc actacttcca tctacacgcg tacttaaaaa ctgatcagct
     1981 tcattgagaa gtaaaatagg actttgtttg caagtttgca cgatattttt ataagtatca
     2041 aaaatttttc ttacattttg ctcactctct ccaacccatt tgctcaaaat tttagaacag
     2101 tcaaaactaa gaacaggttt tttcattgat ttagccatag ctaaagctga catagttttt
     2161 ccagtaccag caggaccata aaaaataatt ttagcttcta tatttttatt actctttata
     2221 ccccaagaat gaagtctttc taggactttt ttatcttgtt gttttaaaat attttctaaa
     2281 agctcttttg tattttcagg cataataata tcattgatgt cagcgcttgg ttctataagc
     2341 tcgaaaatat cttgatcttt taaaacactt tcaattttga tttttttact ttgttttggt
     2401 tcaaaattta taattctttg taaaatttca tcgataataa aaaaactttt agaaatatct
     2461 ccaaaagcat ttaaatattc atcatactcg attaagttta aaagaggagc attttcttgt
     2521 aataattttt tgtttttatg tctttctaaa tcattttcac tgattaaaga aagtaaagaa
     2581 ttcatttctc tagaaatcga actttcatta cttaaggcat attcttcttt taaaagtgct
     2641 agaaaaataa tttgttcttt atgttcaaga ttatattctt taaaaatatc agccaataca
     2701 ttataaaatt tacttttttt tagtctttct ttgatatgtc tttcataaag tttaatttgg
     2761 ttttttattt cactattata agcacttttt tgtataaaac ttaatctttc atataattga
     2821 atacgcgcaa attcatcttt taaatattct aaataatctg cataagcctc ttgtttctca
     2881 aaatttaaac gaggttttgc ttctaaaaat tctaaaaaat attcacttag actaagctcg
     2941 ctttgcaata aggcaagagt taatgtttga gttttattat tttctaaact tttaaaaaaa
     3001 ctcgaatttt gatttacaaa acctctttca ataagttttt ttaaatcctc caaagcatca
     3061 agataaagat acttatcatt tccaaaaatt gtcgataata aagtaaaggc attgatagaa
     3121 gaaatagaaa cgacataatt tctacaaagc tccctaagaa tcaaagcctc atttttagca
     3181 cacttaagct ctttataaat ttgagtatct tctatatttt tcaaacttaa aaaatttttt
     3241 aatttctcca ttatttttta aattccttaa gctcatcttc attaaattct acgcaaatat
     3301 tttcatctaa aaaatgacct tcaaaaggta gataacaaat ttttagtttt ccattattaa
     3361 gcaaaaaatt attattaaat tgtaaatttt gcagatcttc aaaacactca tcacatgtat
     3421 ttttaagctt ctcatgtaaa agattttgaa atttttgatt ttcagtatta tataaatcat
     3481 ttagttttac aaacgcgtga gcattaatat cataaacaaa attattcaac tctaaaatag
     3541 cacgactcat accatcttca taaaaataat accattcttc aaaactaatt tttccatctt
     3601 gtaaaaaaat aggtttttgg tgaatttgtt caaaactaaa tacaccctta tgaacaggat
     3661 gaaattcttt aaaatcatca ttaaaaccta taaaatcaag actacgcttt atacgaatgc
     3721 catcttgcgt ttcgacaagt tctaaagtag ttgttcctaa attttctcct tgaaaatttt
     3781 tattatcata tgtaagcatt ttagaagaat tgattttata ttttttacac tcatcttgcc
     3841 aaaaatcatt tatcttaacg agtggaatct ctaaatttcc atttatatca tcaataatta
     3901 aaaaactaga acttgtttga tttttatccc tgtcaaaaag tggagtcata ggcgcattat
     3961 cataaactat ggcaaaaatt tctttatcct gcaaatgata aaaatacaat tcacctttat
     4021 aaacttgcgc taaagctaga tttacaaagc aaaataccag taaaaaaaat ttcaaactct
     4081 atcctttaat tttgaatatg cgttaagata attttagtat gcgaaatttt atcaaaaaaa
     4141 cttactttat tatcacaaac ttgataaaaa atttcataat tttttgcttt taaattttgt
     4201 tcaaaaccac aatcagtttt ttctaaattt ttaccctgcc ataaaggatt tgcctttaaa
     4261 atatcactta aaatatcatc ataatataca tttttaaaaa atttttgatt aaacacttgt
     4321 ttatcataac acactacatt gatgcaaatt ttatctttga ttttgagttc aaaaaaagct
     4381 tgccctagtt tataaacttc taaatttaaa gcattatttt ctttttttaa aaaagctgta
     4441 tcattgattt ttatcatagg agaagcaatc aaaaccatca agctttgact tgaaaaattt
     4501 tgatttttca cactacaagc acaaagaaaa aaaacaaaac atagagctaa acaatgtttc
     4561 aaatttgacc ttatttgaga tttttaaaac tgatatttaa ctctaaatca agctctttta
     4621 caagcttcat cacagcttgt aaatcatcga tttgttttgc tgcaacacga atttcttcac
     4681 cacgaatcga agaattaact ttaagcttgc tatctttaat aactttattg atttttttag
     4741 cattttcact atcaatagca tcgtttgctt tcaaatttaa acgaaacatt gctccacttt
     4801 cacgagaaag ctctttaata gcattaggat taattcctct tttgataagt ttagaaatca
     4861 ctatatcttt taaaacatca agttttcctt cactagaaga actgagttta aaaatactct
     4921 ctttttcgct taaatcaatc tcacacttaa ttccttttaa gtcataacga ctatcaagtt
     4981 cttttttagc ttgttcaaaa gcatttttta actcttgttt atctaaagct gctgaaatat
     5041 caaaactatg ttcacttgcc attttctatc cattctttta aattattata aactatatcc
     5101 attaaagcat ttaaagcctc cttgctcgcc cacgcaacat gaggagtgat aataagattt
     5161 tctttatttt taatgcttaa aagtggatga tttttcatca taggttcaat ttctaaaaca
     5221 tcaagcccta cacgaatatt tttttcatct atgattttag ctaaatcatt ttcattgaca
     5281 atcccacctc ttcctacatt aatcaaaatc gcattatctt ttaaaagctt taattcttca
     5341 aaggcgagta aatttttggt tttttcattt aaaggtgcgt ggatacttat aatatcgcaa
     5401 gtttttaata aatcttttaa ttccaaatgt acaaaatctg cgtttttatt agctccactc
     5461 gtagaataat aataaatttc ggctccaaaa gcctttgaaa tttttgccac ttctttacct
     5521 atggttccta aacctataat accatgtttt ttaccactta aggtgtttaa aattctacta
     5581 taatctgtaa aaataggact ttcacaccat ttaccctctt tgctccattt gtcataataa
     5641 agcacttgat ttaaaaaagc aaacataaat gcaaaagtat gttgcaccac actcatagta
     5701 gaatacccag cagcattttt tacaataata cctttttctt tagcatactc aatatcgata
     5761 ttattaaccc ctgtagcagt ttccaaaatg agttttaaat ttttacaagc atcaatcaca
     5821 tctttatcaa ttacaacctt gtttgtcatg gcgacattag catcttttaa acgctctatg
     5881 gtttgctctt tatttgttgt ggtataaatt tgcaaagaac caaatttttc aaaaacactt
     5941 aaatcataat cccctaaagt tgccgcatct aaacaaacaa ttttcatttc taatccttta
     6001 taatatgtcc tacaaattta gaataattat caagcacaag tcctcctttt ctaaatccta
     6061 agccacaccc ttcataagca aagaaaacac ctgcttgata gtattcgttt tcacatgaat
     6121 taaactctac atattcttga taaatagcct tattattccc ataaggacct acattctcat
     6181 gcaaagtttt tccatcttta attatactga tatttgcacc ttctctacca aaaacaggtt
     6241 ttttaacata gtttttacct tccaaaggag tatcttttgt ttctaaaagt aatggatgat
     6301 ttggataaag ttcccataga atttttaaaa ttcccttaga ttgaaataaa agcgtataag
     6361 caggatttaa aataattgct ctttgattac gcatgatttg agttaaaagc atagcaagtt
     6421 caccctcttc tatggctata tcttcccaag gaataagctt aaaccaatac tcataatttt
     6481 caccctcttt aaaaattcct tcttcactaa attctacctc atctacaaag gaaaaattag
     6541 tttgaaaacc tgcttcattg gctatatgtg caagcaattt tgtagtgatt tcctcttctt
     6601 tacttcctgc aacacttgaa aaaagaattt tccatccttg ataatgctct tcaaaccctt
     6661 caacactttc atcaagggta ataagtcttt taaaattatc catcaaactt tcataaatgc
     6721 tgttaaattg tgcgctttca tccattccat tttgttttaa aagtgcccat tgtaaaatcg
     6781 cactttcaaa aagagcagta ggggtatcag cattaaattc tataagtttt ataggcttgc
     6841 catcaagtcc acccgctaaa tcaaaacgcc catataaatg ccaatgaacc tcattttccc
     6901 aactcatctt aatcgcatca ataagattaa aaggaattcc aagctcatca aaacgatcat
     6961 tattaatcac ttcttgcgct gcagcaataa acatatcata aagctcattt accgcttcat
     7021 aataagcatt agcttcactt tccttaacac aaactaactt attgctaata taatcacttc
     7081 catcttcatc tgtatgccaa gaaaaaccta tattttctaa ataatctttt tgaagtttgt
     7141 ctacttgtaa taattgcatt atttatcctt aagagccaaa agaagaacta gaacttgtgg
     7201 ctttagagcc tccaccaaaa aaacctgatt ttttagcact tgaagcagag cttgttgtgc
     7261 ctgctttatt aaaactatta acactccttt gataagcact ttgatttgaa aaagcaccgc
     7321 gttgttggtt ggcaaaattt tgattattga aaagttttga acctatccaa cttcctaaaa
     7381 tagcacctgc agcacttgcg agtaaagttt cccctaaact caatccccca ctactgattt
     7441 gtccattgtc tttagttaaa tttgaagttc cattatcaat tttagctgct tcttctttaa
     7501 tcaaagcatc catttcttct ttggataaaa ttctttctgt accattaaga tcttttaaaa
     7561 ctacccttgt ttcatcactt ggatattgat ctttgatttt atactgccct ggagctgttt
     7621 cttcgataat tacaaaagct ccttgagcat tagccgcttg atttaaagta tctgcattgt
     7681 cattattact tccacaacct gctaaagcac ctccagcaac agctgctaaa ccacctatca
     7741 taccaatttg aatgattttt ttgatttttt tcataagttt atcctaaaaa cagaaaattt
     7801 aaattagaaa ttttaacaaa aaataataaa tactttttaa tttaatacca aatgaagttt
     7861 gtagatataa aaaagccctt tcgggctttt gggttagagt cttgactcgt agcgtctaag
     7921 catataaagt cttttaagca tttttttgcg tgctgaaatt ttttgttttt tgcgaatttc
     7981 agtcataggc tcaaaaaatc ttcttgctct tacttcagtc acaactagat ttctatctac
     8041 ttgttttttg aatttacgat acgcttcatc aaaagactcg ttaggatgca ccttgattcc
     8101 tggcacagtc ctcaccacct ttctgtgtaa atttttgttg tgaaatataa ttataaaaca
     8161 cttcttatta attctaactt agaaagcatt taaaaattgt tttagttttt atcggttata
     8221 atccttaatt acaaagtgct aaaaaattat aattaaggtc taaaaatgca aggacacatt
     8281 acaaactata caaaaaaacg atattttgta tatttaattg caagtattat catattttcc
     8341 ctacctttca taagaattaa tgagaatcat ttttttcttt taagttttga tcattctaaa
     8401 ttaaacctat tttttatttc tttttcaaca caagaatttt atctcatgcc ttttgttctt
     8461 atatttcttt ttttatttat tttttttatt acaactttag gtggaagaat ttggtgtgct
     8521 tggagttgtc cacaaacgat ttttagagtt atatatagag atatcataca aactaaattt
     8581 cttaaaattc gcaaaaatat caataacaaa caaaaagaat atgagaggca atattttaaa
     8641 aaatttcttg gagtgataat tttttatttt atatctttag ttgctgttag taatttactt
     8701 tggtacttta ttcctcctga agattttttc aattatattc aaaatcctgg cgagcatcta
     8761 cttttacttg gaattttatt ttgtgctagc ttacttttta ctttggatat tacctattta
     8821 caagaaaaat tttgtgttta tgtctgtcct tatgcaagaa tacaatctgt aatgttcgat
     8881 catgatacaa tgcaagtgat ctacgatgaa aaacgcgggg gcttgatcta tgatggacac
     8941 accaaacttc ataaaaaacc gcctgaggga gagtgcatag gttgcgaagc ctgtgttagt
     9001 atctgtccaa ctcatattga catacgcaaa ggaatgcaac ttgaatgtat taattgtctt
     9061 gaatgtgccg atgcttgctc taaggttcaa agcaaattta atcgtccaag tttgatcaat
     9121 tggacaagtg caaaagctat tgaaacgcgt tctaaggttc attatttaag atttagaacg
     9181 atagcatatt ttatagttct tttaattgct ttactggctt taatcatcat gggaagcaaa
     9241 aaagaaagca tgcttttaaa tatcaatcgt agtagtgaat tatataatat ttcaaatgtt
     9301 aaaggtgaat tagtcatttc aaatgcttat acctttttgt ttcaaaatac agattctaaa
     9361 cctcatgaat attattttac agcaaattta gaaggaataa atgatggaat tgaaatcata
     9421 agaccaaaca aaccttttaa attaaaagca ggagaacaag tcaaaaaaat agttgttatc
     9481 agggctacaa aaaatttagc aaataatgat aaaaaagacg taatctttcc tttacatata
     9541 aaagcttacg caaaggataa tgaaaaaatt tcggttttta gaaaaagtat atttgtatac
     9601 cctaaaagca ctcttataaa ggataaaaat gaactcaaat agaacaccat cacaaaaagt
     9661 tttagccaga caagaaaaaa tcaaagcagt ggccttagag ctttttttaa caaaaggata
     9721 ccaagaaaca agtttgagtg atattattaa attatctgga ggatcttatt ctaatattta
     9781 tgatggtttt aaaagtaaag aagggctatt ctttgaaatt ttagatgaca tatgtaaaaa
     9841 acactttcat cttatttatt ccaaaacaca agaaattgaa aatggcactt taaaagaaat
     9901 tttaacttct tttggtttag cttttataga aattttcaat caaccagaag ctgtagcttt
     9961 tggtaaaatt atctattctc aagtttatga caaagataga catcttgcca attggataga
    10021 aaataatcaa caaaattttt cctataacat acttatgggt tttttcaagc aacaaaataa
    10081 ttcttatatg aaaaaaaatg cagaaaaact tgctgttctt ttttgcacta tgttaaaaga
    10141 accttatcat catcttaatg ttttaattaa cgctcctttg aaaaataaaa aagaacaaaa
    10201 agaacatgtt gaatttgttg taaatgtttt tctaaatgga atcaatagct ccaaagctta
    10261 aaaaataatt ttattaacca aaattaagat ataattagcc aaaaattttt gtaataaaaa
    10321 ttacaatttt taatttaatt tttcaaggca aaaccatgaa attatttcaa aaaaatacta
    10381 ttttagcttt aggtgttgtg cttttactca ctgcttgcag caaagaagaa gcaccaaaaa
    10441 tacaaatgcc gcctcaacct gtaacaacca tgagtgctaa atctgaagat ttaccactta
    10501 gttttactta ccctgctaaa cttgtcagtg attatgatgt cattataaag cctcaagtta
    10561 gtggcgtaat agaaaataaa ctttttaaag ctggagataa agtaaaaaaa ggacaaacat
    10621 tatttattat agaacaagac aaatttaaag ctagtgttga ttcggcttac ggacaagctt
    10681 tgatggctaa ggcaactttc gaaaatgcaa gcaaggattt taatcgttct aaagctcttt
    10741 ttagtaaaag tgcaatctct caaaaggaat acgactcttc tcttgctaca tttaacaatt
    10801 caaaagctag tctagcaagt gctagagcac agcttgcaaa tgcaagaatt gatctagatc
    10861 ataccgaaat aaaagctcct tttgatggta ctataggaga tgctttagtt aatataggag
    10921 attatgtaag tgcttcaaca actgaactag ttagagttac aaatttaaat cctatttacg
    10981 cagatttctt tatttcagat acagataaac taaatttagt ccgcaatact caaaatggaa
    11041 aatgggattt agacagcatt catgcaaatt taaatcttaa tggagaaacc gttcaaggca
    11101 aactttattt tattgattct gttatagatg ctaatagtgg aacagtaaaa gccaaagcta
    11161 tatttgacaa caacaactca acacttttac caggtgcttt tgcaacaatt acttcagaag
    11221 gttttataca aaaaaatggc tttaaagtgc ctcaaatagc tgttaaacaa aatcaaaatg
    11281 atgtttatgt tcttcttgtt aaaaatggaa aagtagaaaa atcttctgta catataagct
    11341 accaaaacaa tgaatatgcc attattgaca aaggattaca aaatggcgat aaaatcattt
    11401 tagataactt taaaaaaatt caagttggta gcgaagttaa agaaattgga gcacaataat
    11461 gttttctaaa ttttttatcg aaagacctgt ttttgcttca gttgttgcaa ttatcatttc
    11521 tttagctgga gctataggtc ttacaaattt acctatagaa caatatcctt ctttaacccc
    11581 tcctacagtt aaagtaagtg caacttacac aggagctgat gcacaaacca ttgcttcaac
    11641 agttgcaagt cctatcgaag atgcaatcaa tggcgcagat aatatgattt acatggattc
    11701 aacttcaagt tcttcaggaa ctatgagttt gactgtttat tttgatatcg gtacagatcc
    11761 taatcaagcc accatagatg ttaataatag aatttcagcc gcaactgcaa aaatgccaga
    11821 tgcagttaaa aaacttggag taacagttag aaaaacttcc tcaacaacac ttgctgcaat
    11881 ttctatgtat tcaagtgatg gctcaatgag tgcagtagat gtatataact atatcacttt
    11941 aaatgtttta gatgagttaa aaagggttcc aggagttgga gatgcaaacg ctataggaaa
    12001 tcgtaattat tctttaagaa tttggctcaa gcctgattta ttaaataaat ttggaatcac
    12061 agctactgat gtaatttctg cggttaatga ccaaaatgcc caatacgcaa ctggtaaaat
    12121 tggcgaagaa cctgtaaccc aaaaatcccc ttatgtttat tcaatcacta tgcaaggaag
    12181 actacaaaat cctagtgaat ttgaaaacat tattttaaga acaaataatg atggatcatt
    12241 tttaagactt aaagatgtag ctgatgtgga aataggatca caacaataca gctcacaagg
    12301 acgattaaat ggcaatgatg cagttccaat tatgatcaat cttcaatcag gggcaaacgc
    12361 attgcataca gcagaacttg ttcaagctaa aatgcaagaa ctttcaaaaa attttccaaa
    12421 aggtttaaca tataaaattc cttacgatac aacaaaattt gtaatagaat caatcaaaga
    12481 agttgttaaa acttttgttg aagctctaat tttagttatc attgttatgt atatgttctt
    12541 aaagaatttc cgtgcaacac ttattcctat gatagctgta cctgtttcat tgttaggaac
    12601 ttttgctgga ctttatgttt taggttttag tattaacttg cttacgcttt ttgctttaat
    12661 tttagccata gggatcgttg tagatgatgc gattatagtt gtagaaaata ttgataggat
    12721 tttacatgaa aatgagcaaa taagcgtaaa agatgctgct atccaagcga tgcaagaagt
    12781 tagctctccg gttatttcaa ttgttcttgt gctttgtgct gtttttgtac cagtttcttt
    12841 tatatcaggt tttgttggag aaattcaaag acaatttgct cttaccttag ctatatctgt
    12901 aaccatatca ggttttgttg ctcttacctt aacaccttct ttatgtgcac tctttttgcg
    12961 acgtaatgaa ggagagccat ttaaatttgt aaagaaattt aatgattttt ttgattggag
    13021 tacctctgta tttagcgcag gagtagcata tattctaaaa agaaccattc gttttgtttt
    13081 aattttttgt attatgcttg gggcaatttt ttatctctat aaagctgtac caagctcttt
    13141 agttcctgaa gaagatcaag gtttgatgat tggcattatc aaccttcctt cggcttcagc
    13201 actccataga acaatctcag aagttgatca cataagccaa gaagttttaa aaactaatgg
    13261 agttaaagat gcaatggcta tgataggatt tgatcttttt acaagttcac tcaaagaaaa
    13321 tgccgctgca atgtttatag gcttgaaaga ttggaaagat agaaatgtga gtgctgatga
    13381 aatcgccatg gagcttaata aaaaatttgc ttttgatcgc aatgcttcaa gtatatttat
    13441 aggcctacct cctatacctg gattaagtat cacaggcggt tttgaaatgt atgttcaaaa
    13501 caaaagcgga aaaagctatg atgaaataca aaaagatgta aataaacttg ttgctgtggc
    13561 caaccaaaga aaagagctat caagagtaag aacaaccctt gatacaactt tccctcaata
    13621 caagcttata attgatagag ataaattaaa acactacaat cttaacatgc aagatgtttt
    13681 taacacgatg aatgcaacta taggcactta ttatgttaat gatttttcta tgctaggtaa
    13741 aaacttccaa gtaaatatcc gcgcaaaagg tgattttaga aatacacaag atgcattaaa
    13801 aaatattttt gtaagatcaa atgatggaaa aatgatacca cttgattctt tcttaacttt
    13861 acaaagaagt tcagggcctg atgatgtaaa acgattcaac cttttcccag cggcacaagt
    13921 tcaaggtcaa cccgcaccag gttatacttc aggtcaagct atagaagtga ttgctcaagt
    13981 agcaaaagaa actttagggg atgattattc catagcttgg agtggatcag cttatcaaga
    14041 agtttctagt aaaggaacag caagttatgc ttttgcttta ggtatgatat ttgtcttttt
    14101 aattctagct gcccaatatg aaagatggct tataccttta gcagttgtaa cagctgtacc
    14161 ttttgcggta tttggatcat ttttattggt atatttaagg ggatttagca atgacatata
    14221 ttttcaaaca ggacttttgc tcttgattgg actttcagct aaaaatgcta tcttaatcgt
    14281 agaatttgca atggaagagc gctttaaaaa aggcaaagga gtttttgaag cagctgttgc
    14341 agcagcaaaa cttcgttttc gtcctatcat aatgacttct ttggcattta cttttggggt
    14401 cttgccaatg attttcgcaa caggagcagg aagtgcttca agacactctt taggaacagg
    14461 gcttattggt ggaatgatcg cagcatcaac tttagcgata ttctttgtgc ctttattttt
    14521 ctatctttta gaaaatttta atgaatggct agataaaaaa agaggtaagg ttcatgaata
    14581 aaataatttc aattagtgct atagcaagtt ttactctttt gatttcagct tgctctttaa
    14641 gtccaaattt aaatattccc gaagcaaact atagcattga taataagctt ggagccttat
    14701 cttgggaaaa agaaaacaat agctctatca caaaaaattg gtggaaagac tttgatgatg
    14761 aaaatttaaa taaagtggtt gatttagcac ttaaaaataa taatgattta aaacttgctt
    14821 tcatacacat ggaacaagct gctgctcaat taggtataga ttttagcagt ttgttgccaa
    14881 aatttgatgg tagcgcaagc ggaagtcgtg caaaaacagc tataaatgct ccaagcaatc
    14941 gaactgggga agtaagttac ggtaatgatt ttaaaatggg acttaattta agctatgaaa
    15001 tcgatctttg gggaaaatat cgcgatacat atcgcgcctc aaaatcaggc tttaaagcaa
    15061 gtgagtatga ttatgaagct gcaagacttt ctgttatttc aaatacagtt caaacttatt
    15121 ttaatcttgt aaatgcttat gaaaatgaaa atgctcttaa agaagcctat aaatctgcaa
    15181 aagaaattta taggattaat gatgaaaaat ttcaagttgg tgctgtaggt gaatatgaac
    15241 ttgctcaagc aagagccaac ttagaaagta tggctttgca atataatgaa gcaaagttaa
    15301 ataaagaaaa ttaccttaaa gctttaaaaa ttttaacttc aaatgattta aatgacatac
    15361 tttacaaaaa tcaaagctat caagttttta atcttaaaga atttgacatt ccaactggaa
    15421 tttcaagtac catcttgctt caacgtccag atattggctc ttctttagaa aaattaactc
    15481 agcaaaatta tcttgttgga gtagctcgca cggctttctt acctagcctt tctttaacag
    15541 gattattggg atttgaaagc ggggatttag ataccttggt taaaggaggt tctaagactt
    15601 ggaatatagg tggaaacttt actctgccta tttttcattg gggtgaaatt taccaaaatg
    15661 taaatttagc caagcttaat aaagatgaag cttttgtaaa ttatcaaaat actttgatta
    15721 ctgcttttgg agaaattcgc tatgctttag tagctagaaa aactatacgc ttacaatacg
    15781 ataatgcaca agcaagcgaa caatcttaca aaagaatcta tgaaattgct aaagaacgct
    15841 atgatatagg agaaatgtct ttgcaagatt atttagaggc acgtcaaaat tggcttaatg
    15901 ctgcggttgc ttttaataat attaaatatt cttatgccaa ttccatagta gatgtaatca
    15961 aagcatttgg tggaggattt gagcaaagtg aagatacgag taaaaatata aaagaagaat
    16021 caaaaaattt agatatgtct tttagagaat agtttgttct attctctaaa taaattaaaa
    16081 atctttgtct aaatctgcat ctgtaatttc ataagccttg taaatagcag gcaataattt
    16141 tcttatagca taatcaaaat gataaaattg cttatatacc tcttctggat ttaaattttt
    16201 agcattctta aaatcaaata cttcagtatt attgattttg gcaatatttt catcaaaata
    16261 agagtaaaac tctgctcttt gtttaaacaa agcatttaaa ttttgaacaa ttttggcttt
    16321 atccattttt atatcctttt taaataattt aaaaacttaa tcccattttt tatttaagaa
    16381 ataaaaaatt tactcctatt ttagctaaaa attgataaag ttatgtctta aatattttaa
    16441 tatataggcc acttatgaat ttatttcaaa atttagcttt aaaatactct catactatga
    16501 tggaaaaatc cctccaaaaa ggtttcaatg tcgaactttt aaaacaaccc gaagaaaaaa
    16561 ttccaaaaca agacaaaagc tatatgcttt atgcccatgt acctttttgc catacttttt
    16621 gtccttattg tagctttcat aaatattatt atgatgaaaa tttagccaaa gtatattttc
    16681 aaaatcttag agaagaaatt aaaatcatga aaaataaagg ttttgatttt acctccatgt
    16741 atgtgggtgg tggtacaaca ctgattgatg aagaggaatt attaaaaacc ttagaacttt
    16801 gtaaaaagtt atttaatata aaagaaattt catgcgaaag cgatccaaat catattgatc
    16861 caaataagct ttctatgttt aaaggtataa ttgatcgttt aagttgcggg attcaaagtt
    16921 ttgatgatga aactttgaaa aaagtggcaa gatataataa atttggttca tctaaagaac
    16981 ttcaagaaaa aatttcaaaa gctttaggaa ttttacctat ttttagtata gatcttattt
    17041 tcaatcttcc aggacaaaac gaaaaacaac ttttaaatga cttagaaatt gctaaaaatt
    17101 tagccccgca acaaatcaca acctatcctt taatgaaatc aaatcttacc aaagataata
    17161 tcgctaaaag tctaggagtg agcattaaag ataatgaatt tacttattat caaatcatac
    17221 gagaattttt taaagactat acccaaaaca atggttggag tttttcttta gaaaaaaaca
    17281 agcttaatga cgaatatgtc agttctcatc atgaatacct aggagtaggc agcggggctt
    17341 ttagcttttt agatggggag cttttaatca atgcatttaa tctaaatgat tatgctaaat
    17401 ttatacaaga aaaacaaaat gctaatatag ccaaagcttg ttttgataaa aaagaaatta
    17461 tcaaatatgt ctttttaact gaaatttttt cagggaaaat agaaattgat aaatttaata
    17521 aaactctaaa ttgcaatctc gaaaaagaac ttttcataga acttttagga cttaaaacaa
    17581 gtggtgccat cataaaagat caaaatgctt taatcgcaac tgaatttggt caatatcttt
    17641 ttgtggtttt aatgaaagat ttttacacag gaatggatct tgtgcgcgca gtatttagag
    17701 atgataagcg tcttaaaaat aaagattata tcgatatcat gaaagaaaat attgatccgc
    17761 ttaactctgc tagtatggaa tttaaagcgg agacaaacta aaagggacga acaaccatca
    17821 ttaaagcgat gataataaac attatagttg gaaattcatt ataaattcta aaatattttc
    17881 cacttttagt agaagtatca tttgctaaag cttttaaaca ataataatta tgtatatgaa
    17941 aaataatcaa aagtgtaaca caggtaagtt taacatgcat aaaacccgca cctaccatta
    18001 aaacttcctt atgagcatgc aacattaaac ttcctgtgat taaagtcaca atcattgcag
    18061 gagtttgtat ataataataa agctttcttt cttgaatttt tacaacctcg acaaaacctt
    18121 tattgtcttt atgttcagca tgatacacaa aaagacgagg taaataaaaa agacccgcca
    18181 tccaagaaac aaatgccaaa taatgcaccc atttaatcca aaaataataa tcattaatcc
    18241 attctgtcat cttttttcct ttttttaaat atttcttgta ttaaaatcaa agccacactt
    18301 atatttatca tgacatctgc aacattaaaa atagcaaaat taaaccattt atgccaaaaa
    18361 aacatatcca ctacacctcc atgtataaaa cgatccaata aatttgaaac gccggcacca
    18421 agcatcattc caaaagctat gctatgagtt tttaaaagtg ttctttgcca aaaaagataa
    18481 ataaaaagca cgccaattaa agcaagatgt aaatatttta aattatgttc taaaaaactc
    18541 aacattgaaa aagctacgcc tgtatttaga gcataagtta aatctaggta ttcactctgc
    18601 catctaaatc ctgctaaagt taaggatttt acccattgat caagggcaaa aaccaaaaca
    18661 aaggcacccc aaaaataaaa aataaattta aaagttttag ccatttaaag ctttcttaaa
    18721 aaactccaca acatttttca tttctttttc taagagctta atatctctgg cttctagtaa
    18781 aagtcttatc aaattttctg ttccagaata gcgaaataag gtattaatat ttttattttc
    18841 taaatctttt tttaattctt ttaaaccttt aattttatct aaatcttttt tttctgcaat
    18901 tttaagattg attaaaagct gaggataagg tttaacttga cccaaaatag aacttgcaga
    18961 ttttttctta gaaagcatta aagcactaaa ttgcaaggca gctatcaaac catctccagt
    19021 ttttgcataa tcgctaaaaa taatatgccc actttgttct ccaccaaaat ttccaccatt
    19081 ggcttttagt ttttcaagca catatttatc gccaacatta caagtatcaa gttctatacc
    19141 atgtttattt aaaaactctt ttaaagcacc attactcatt atagtagcca caacacttga
    19201 ttgtaattta ccttgttctt taagataaag tgccaataca cccaataaac tatccccatt
    19261 agccacttcg cctttttcat ctacaaccac caaacgatct gcatcaccat caaaagcaaa
    19321 gcccacatct gcacgcaaac gctttacctc agcagctaag tttacaggat gcaaagctcc
    19381 acaattttca ttgatattaa gtccattagg tttatcactc attactataa cttcagcgcc
    19441 taattcctta aaaacagtag gtgctacctt ataagctgcc ccatgagcca catctaaaac
    19501 aacacgcaaa gactttaaag taagatcttt tggaaaagaa tttttaatag aaacaatata
    19561 tcttcctata acatcatcaa ttctttttgc ttgaccaatt ttttccatat ctaccttaga
    19621 ggcttgtata agcttatcat caaaataaat ttcttctatt tttttctcta tatcttcact
    19681 gagtttattt ccatgagcat caaaaaattt aataccgtta tcataataag gattgtgaga
    19741 agctgaaatc ataatccctg cgtcacaacg catatcttca gttaagaatg caatcgcagg
    19801 agttggcata ggaccaattt gtataacatt atatcctata gaagtaagcc ctgaaacaat
    19861 agcattttct atcatatagc cacttcttct tgtatctttt cctactaaga tattattagt
    19921 aatactttta tctttaaaat aaatacccgc agccattgct aaacgcatag ccaaaaaact
    19981 atctaaaaat tcacccgctt ttccacgaac tccatcagtt ccaaaaagtc tcattgcaaa
    20041 cctttctagc aaaatttaaa gacaattata acaaagctaa gataaagaaa tttaaacaag
    20101 ctctaaaaat agagcttgtt tggaacctta tagttcaggt ttaggagttt tttcagtaga
    20161 aataggaagt tgtggataaa caattgctgg ttttgttcct gttaaggatt ttaagaaagt
    20221 ttcaatactt tttgcttctt tatcagaaat tttaatgcca agttgcacac tacccatttc
    20281 cttaatagca tcttttagat tccaaatagc gccattatga aaatatggag cagtttcagc
    20341 aacatttctt aaagttggag tttttaccat gccatttgca tcacctttaa aatcacctaa
    20401 atttgcaaat ttatatttac cagcaacttc aaacgcttgc atattgccac ctaaattcac
    20461 accattatga caagctacac aacccttgtc tataaaaagc tttaagcctt tttgctcttc
    20521 ttttgttaaa gctttttcat cgccttctaa aaatttatca aaacgagatg gagtgatcaa
    20581 ggttctttca aaatttgcaa ttgcatcagc aatattgtca aaatttacac cacttttacc
    20641 atagattttt ttaaactcac tcacatattc aggcaatgat gaaatttttt ctactgcgag
    20701 tttagcagga gttgccattt caggatcagc ttggattgga cctttagctt gatcggctaa
    20761 tgttcctgca cgaccatccc aaaattgagt attatttaaa accgcattat aaactgttgg
    20821 tgaatttaaa tgatggggat ttgctgtcca tttatgacct attgcagtac taaccccatc
    20881 tgttccacca agtcctacat tgtgacaggt attacaagaa atgataccac tttttgaaag
    20941 gcgtggttca aaatagagct ttttgccaag ctctgctttt tcaagagtaa attcactagc
    21001 ctttactcca ttttgtttta aaatttcatc aacacctttt tgatcttttg gcaaggcaac
    21061 aagacctgaa tttttagctt catctataag acttgcagca tttaagcttg aaaaagcaac
    21121 taaggatgcg attagcaatg cttttacttt catttataaa ctcctattaa agataaatta
    21181 aaataaaata ataat
//
LOCUS       DAPIWB010000028        20835 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.029, whole genome shotgun sequence.
ACCESSION   DAPIWB010000028 DAPIWB010000000
VERSION     DAPIWB010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20835)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20835)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20835
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.029"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            110..1174
                     /gene="mqnE"
                     /locus_tag="RJ266_000842"
     CDS             110..1174
                     /gene="mqnE"
                     /locus_tag="RJ266_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminofutalosine synthase MqnE"
                     /protein_id="HDV7354605.1"
                     /translation="MKNLITKLENEERLNQEEANALWDLDLFTLGKYAHKKRTKLHGK
                     KVYFNINRHINPTNICADTCKFCAFSAHRKNPNPYLMTHEEIMKIVDETVKRETKEVH
                     IVSAHNKDTTWQWYLEIFKMIKEKYPNLHVKAMTAAEIDFLHRRFKMSYEEVIEKMLE
                     YGVDSMPGGGAEIFDEEVRKKICHGKVSSENWLKIHKLWHQKARQSNATMLYGHIEKR
                     EHRIDHMLRLRALQDETGGFNAFIPLVWQKDNSFLDVKEQLDSEEILKTIAISRLVLD
                     NIKNIKAYWATMSLNLAMVAQEFGANDLDGTIEKESIQSAGGAKSARGTSLQTFIELI
                     KTSNLIPVERDSLYNELKIY"
     gene            1237..4602
                     /locus_tag="RJ266_000843"
     CDS             1237..4602
                     /locus_tag="RJ266_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002853640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDV7354606.1"
                     /translation="MKKSIFLSFIIVFNGYALSDQELIGSKEAYKLTITGDGINVGVI
                     DSAINGEHPSLKGKVLEQTFSTVNGKTYTPDYSVDTHGSHVAGIIGAKYIDENKPHGV
                     AYNAKLYGVQIFGNNKGSGSFNAPNVYDYFKDKDVKIINNSWNSTTYPVVSMTQTGLY
                     LDAYKNKSSNELFEQIQQNSTAKQLNQLAKENKTLVVFAAGNEGIISPGIMALSPLYN
                     EELRSFLAVGSVDSSQITKNQDGKLVVNGRGLSGFSNGLLGAENFSLVAPGSNIKNVN
                     AAYMQKSSFGRVDKDLYRTQSGTSMAAPMVSGAAALVAQRFPFLNGKQIADVLLSTAN
                     KDYIAPKLTVKETKLKVVEYLGKRPILMEKTFHTIFYIDTDIPKKADGSVDKEQVKRD
                     LSQAGYSRFYTPITEYHGVDESKYASIQKVSKESLFGQGILDVAKAMKGLATLDANRL
                     NNSDVSNTYAGQNEAYYTIDTQGYEAIFSNDISQKKWDGSLHKKDAINLPTNLANLNV
                     GFIKEGSGKLILTGNNSYEGVTIIKKGSLALNNKSENEKARIAGNVKVLEGGLFSGNG
                     EVGKNLENKGIVRPGNEDLSDLIIEGKYTQEGQNSKLQLDFGSHKNSKLIANSYEIKG
                     GKLEYIPLPNFFTSGHYVSIDLGDLGTRLSSFGAVEVVSNNAVDFVAVLDSDKTSINK
                     DKMPQPAPQPQPTPQPDITNPQPPVTQPSPITPPPTTTPPTTTPPPNHIIVKPVIKKD
                     AYESANSTMGRSLRSIRSMHNLQDRYKDYFAFLDNTDTKTMEKTLESLEANSYMQSAS
                     GLYYQQHILAQRNMMSALNPSFTSGNLMASLEKDPLLTASIESDVFIDLGLLDKMDKR
                     YIWNLSPNYKKINGDNFDGRSTGLNLTIGGAVNENSLLSFGLDVSDTRLDFENANLKN
                     KYFNFSFNHILDLQNFKILSGASLARASNDMTRAIIGQNGSLSSNYDNLLSSLQLGLA
                     KDFQIFNNLTLTPLAYFNYNFIKQDAFSENGNLVFAKSYDTINHHTTSLAGGLNLSYL
                     FDREAMQTKLGSFFIYEYKLSGKTIENNVRFKDFPNQDFVQYHRLNSNLITWGLTSYF
                     IYPNSFFYGFNVVNEFASDQYNINVLGQFGFYF"
     gene            4649..5968
                     /locus_tag="RJ266_000844"
     CDS             4649..5968
                     /locus_tag="RJ266_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HDV7354607.1"
                     /translation="MSIFKLKENGTNIKTEVLAGITTFLTMIYIVPVNSHIVSNTGMP
                     LEALITATALITIIASALNGLFANTPVAMSVGMGMNAYFTFSVCIAQQIPWQSALGAV
                     FLSGLIFLILSFTNFRLWIIRNIPKDLRLAICAGIGCFIAFLGLSQMGVIMHNKDTLV
                     SIGNFKSPHVLFGIFTLALIIFFWAIKLRGAFILGVLVSSIIAWIFHLDNASFPVQIF
                     SWPNFSMENGLGAIFLQLDIKSALNITMIPIILTFFITQLFDSIGTITGVGERGKIFD
                     DPKNGEKKLSKTLMADATGSALGAMTGTSTVTAFVESTTGVESGGRTGLTALVVAICF
                     AFTLFLLPLFKAIPANAIYPVLVMVGILMFMEVKNIDFKDSAIAVASFFTIIMMPFTY
                     SITTGFAFGFLSYLLVRIFKREWDKINLGIIVLSLLSLGNFLLMALQ"
     gene            5982..6425
                     /locus_tag="RJ266_000845"
     CDS             5982..6425
                     /locus_tag="RJ266_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HDV7354608.1"
                     /translation="MIFYSYEEFKEDVKILAKEIKKDFNPDALLAIARGGMSLGHSLA
                     VALKMRQLFALNSIHYDDTKKLDTIEIFNIPDLSKHKKILLIDDIVDSGESLAEIKKV
                     LLEKFPHIELKIATIFYKKTALLEPDFKVKEATEWVDFYWDINLD"
     gene            6470..7168
                     /locus_tag="RJ266_000846"
     CDS             6470..7168
                     /locus_tag="RJ266_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HDV7354609.1"
                     /translation="MRIKFISFILIFFTIFAFAKEQNLDDFEQEYQNYQVNDPLSGYN
                     KAMTSFNVALYDYGLRPVLKGYNAITPEFIRLGVRNFFDNLLAPLRFVGNVLQFKFEE
                     AGEEFKRFTANTIMGFGGLMDVASKMGLKKHPADLGTVLTHWGVGSGFHIVLPILGPS
                     NLRDTLALPATWYASFTAYIDPTWASIAISAYGFGNELSFRLDEIDEIYHNTPNLYPF
                     LRDAYEQRRNELSK"
     gene            7178..7747
                     /locus_tag="RJ266_000847"
     CDS             7178..7747
                     /locus_tag="RJ266_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HDV7354610.1"
                     /translation="MKKIFLILALFFNAFALQLDEISSTMQKNIDASLKLLQDSKEDK
                     KQAADGIFKLFDSIIDYKLMAKLSLSKNYSKLNPKEQEKFTTAFEASLKKSFTDKLSL
                     YKDQVLKVKNGELKNEKRYFLTTSMVVDGEEKNIIFKFYNDNNNWLVYDVDVLGVSIV
                     QTYRSQFGDILANQGFDALLQKLESIVIE"
     gene            7747..10218
                     /locus_tag="RJ266_000848"
     CDS             7747..10218
                     /locus_tag="RJ266_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RND family transporter"
                     /protein_id="HDV7354611.1"
                     /translation="MFAKLLKFFISRPKSTFFGTLFICLFLSFFAFKLSVDASAESLL
                     LEDDADLKTFREISKHYKSDNFLLLAFKPYDEKPFSNENLAKLKKLHEELENAPLVER
                     VFSIINAPLLQSSQNADLKELLKNIPNIESQDINRTKARNEILNSPFYKNNIISKDGK
                     VTGLIIYLKPDTVYNDLVEKRDLATDEKEKDQIRLAIKKHQDKQKVITKQSLDTIKSI
                     VRNYEKNKDTLYLGGVSMIADDMIAYIKSDLVLYGVSLVFLLGLALYYFFRSWRFVFL
                     PLFICFISLSAASGVFALLNFQITVISSNYVALVLIITLSVVVHLITHFIESTQNHPK
                     AKVERIVLETLLAKANPSLYAIVTTMIGFFSLILSNIEPIIKLGIMMSIGIGLALIFS
                     YLFLASILVLLKPKNYHKKEFKFNLLAFCAKTALDPKKRRMIYGISVLAIILALIGIS
                     KLRVENSFVNYFKDGSEIKKGLLVIDKNLGGTLPLEVIIRFPNNKNDKNTSDTLDSFE
                     SEFENLATQETYWFDSKKTRIAKKVHEFLENKEFVGSVLSLNSLLTLGKNINDGKELD
                     DFALAFLNENLPAKFKQDLLSPFVSIENNELRFSMRIVDSDPNLRRNKFLIDLKKQLN
                     ELVKNDGVEVQITGIMVLYNNMLQSLFSSQFDTLIFVILAIFILFIIVFRDLKFSVAA
                     IFVNVIPLSVVFALMGLLGIPLDMMSITIAAIAIGIGVDDAIHYIYRFREEIKNKSLE
                     EAIMISHLSIGSALYYTTISIVLGFSVMMSSNFIPTIYFGILTVFVMILLLSGSLFLL
                     PSFLITIYSKKTKFPNQHKEHILKQ"
     gene            complement(10249..10851)
                     /gene="rdgB"
                     /locus_tag="RJ266_000849"
     CDS             complement(10249..10851)
                     /gene="rdgB"
                     /locus_tag="RJ266_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HDV7354612.1"
                     /translation="MKIILATSNKHKVLELKEILKDFEIYAFDEVLMPFEIEENGKTF
                     KENALIKARAVFNALDEKQKKDFIALSDDSGICVDVLEGNPGIYSARFSGKGDDKSNR
                     DKLVNEMIKKGFKQSKAYYVAAIAMVGLMGEFSTHGTMHGKVIDTEKGENGFGYDSLF
                     IPKGFDKTLAQLSVDEKNNISHRFKALELAKIILKILNKG"
     gene            11018..12313
                     /locus_tag="RJ266_000850"
     CDS             11018..12313
                     /locus_tag="RJ266_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7354613.1"
                     /translation="MLNNVLPLSFIVGTRFFGLFIVLPVLSLYALKLEGANEFLVGLL
                     VGVYALTQMILQMPFGILSDKIGRKKTMLIGLIIFIIGSLICSFAENIYTMLLGRMLQ
                     GAGAIGAVATAMISDFITEENRGKAMAVMGSFIGLSFAASMVISPLMSAKWGLSSLFD
                     LSAALSLLCIILLYTVVPKENKITHENEKTPFFHLIKQKNLALMNLTNFMQKMLMSIA
                     FLSIPIILVKHLGFASDKLWIVYSASMVAGFIAMGFAGSLGEKRGLAKQILLLGIVFF
                     ILSYLFFTFSNSIDFFIIAVVIFFIGFNLHEPIMQSCASKFCKVHEKGAALGLFNAFG
                     YGGSFIGGIIGGIFLHLDTLNLLAIILVILALIWLVALFFLKNPADFKNLYLPLETPL
                     NFSTFGENLGVVDIYKNSKNLVVKFDSKLTSKEELEGKL"
     gene            12310..13119
                     /locus_tag="RJ266_000851"
     CDS             12310..13119
                     /locus_tag="RJ266_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDV7354614.1"
                     /translation="MKKILFLFCSFFLAFAKPSLEIPKLSKQAKQNFILENVKFNYNG
                     TIYKIFIAKNKNENSNYKYKIIYLLDGNAFFPLFLNLFNTPVKENLLIIGIGYDNNLA
                     FDTQKRTKDYTPTTNLNKQGGGSKEFRNFLTTQLIPYINKMYPIDFSHQILFGHSFGG
                     LFAIDTLLYDSKIFSHYFIISPSLWWDNSEFLPNIIKLQTCPKIYIGLGSLETNSSII
                     KGVAKLNAQKLSEKISKETNCKTHFKLFKNETHGSVISKAMLWMKKLLDLN"
     gene            complement(13112..14773)
                     /locus_tag="RJ266_000852"
     CDS             complement(13112..14773)
                     /locus_tag="RJ266_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HDV7354615.1"
                     /translation="MQDFVYIKNDVLIPLPDAIEILDQVNDKEVLICNDKNQKAQIYA
                     PEINFYLKNSQDEILEQSKNVLTLYEARASVYDLGLDLEQSKEVQNRLILVDSDTQTV
                     EFLKEHGFKVIALSSAEILAVFGSVGELCAVVKNQGEEVEIDFDFLLFKAEDLSVVRK
                     DFTRQSGCYNLLNFENLEVLLEFLQSKSPKYHYKTYISYNASVCQYHERRSEHCAKCA
                     EICPTVAILKDDENKHLEFSQVDCLGCGGCISVCPSGSLDYAPMPRESFFILCEFYKD
                     KKILIIPKKMSLENLNLALPKDVLPFMIEGEKWLSSMHFLTLLQNSGANLVFYTDFVS
                     RGSNEAITLLNTFFERKFQKKAIFVAKDEKELQNVLKEQEFIQDLKYDFHNNTLTTRE
                     NFAKRMQEMIKNEDFGSIESGEWLRYGKVEINPNTCTLCLSCVGACNVGALIADKQEN
                     ALKFNASLCTTCGYCELSCAEKDTLKLFRSGMEFRASYFEYQTMAKDELFACIECGKE
                     FATKKAVEKIANLMKPKFGNDENKIKTLYCCADCKAKVMIKAMIN"
     gene            14851..16173
                     /locus_tag="RJ266_000853"
     CDS             14851..16173
                     /locus_tag="RJ266_000853"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HDV7354616.1"
                     /translation="MNKFRTFPQINTLIEDESLKSYPFYIKAFFCKKVVAKLKENFSR
                     DEISKDKLLLEIKKEIKTFYRKDLQSVINASGVVIHTNLGRSVIHEKLYEACKDIICN
                     YSNVEFDLENGKRGSRYALVLEKLKMLFECEDALVVNNNAAAVFLVLNSLCYDKEVIS
                     SRGELVEIGGSFRIPEVIRSAGVKLCEVGTSNKTHLKDYEQAINENTALILKTHKSNF
                     SLMGFHSEVNIKDLHELAKEKGLLSYYDLGSGWCENLNEKLIKNEPKIKKLVQECDIL
                     SFSGDKLFGSVQAGIILGKKELIEKLKQNQLLRMLRVDKLTLSFLNESLKAYLQKDYE
                     KIITLKLLNDDLSFIEKKALRVQKELKFQTQLKKSKSLVGGGSMPDKSLDTYILTFQG
                     DALKLQTRFRKENIIGRIENDEFVLDFRTIRENELQKLILTINQMENL"
     gene            16170..17975
                     /gene="selB"
                     /locus_tag="RJ266_000854"
     CDS             16170..17975
                     /gene="selB"
                     /locus_tag="RJ266_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HDV7354617.1"
                     /translation="MKSVIIGTAGHIDHGKTSLIKALNGFEGDSLKEEQERQITINLS
                     FSNLKLKDKNISFIDVPGHKDLVKTMVSGAFGFSVCLFVVDINEGLKEQSLEHLEILK
                     ILDIKNIILVLSKCDLCENIEQKSVEILEELKNLDYPILKVFRTSIKNNQGIEELKNY
                     LYTIENKENEEELIFHYYIDRVFSLKGIGTVVTGSLNEGSITLNEKIICLDTQKELIV
                     KNIQNHDINLEQIKACNRVALSLNCDYKELKKGYLLSKKGYFKAFKECDALVKAKNLQ
                     NSKMIFCVGSRQIECKINILKKLENDEFFVHFSFDKNVFLSFDEAFILLQNNRVIGGG
                     KVLNPLSEPLKKEQKNKFLMFLKNKDFKAAFSFLKNAHKYGFGLLSSYQRFKLSHQKA
                     LKLAKELNQVFVDEKNLNIYHLQSLEEIKNFIKFILEKNPYAMLSAHSLALRITWASE
                     NFCELGLKEMSNLLDFQNGIYFKKGIDFEKLQEKNNNQLYEILKKQGIKPEAPYNLYD
                     FLELDRKSGDNILKKLTQKGLVVRLSHNLFIEKQALEKLMQECLNLLKNQSLDVQSMK
                     EYFNLSRKYAIAYLEYLDKFPQVSKEAEKRFLTNI"
     gene            18024..18734
                     /locus_tag="RJ266_000855"
     CDS             18024..18734
                     /locus_tag="RJ266_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HDV7354618.1"
                     /translation="MKKLSLILACSASLFAASNSEISDFYSKSIKAQFPNATVSVSNR
                     QKVGNTGFESVIVSVELNGQKQENILFTKDSLITPDLIDLKTGISYAQEYEMKKFQEA
                     RENFTKNAKAVAQKETMVIALGDKNKPAIYVFSDPECPYCREHLAQIDDELKNYQVNY
                     ILTPVHGKSAFEKSALIYKEAKKAKNDKEKIAILNKYYDANIKNYPKVSDAELKEVFS
                     LYEKYRSLGLSATPTIIK"
     gene            18740..19270
                     /locus_tag="RJ266_000856"
     CDS             18740..19270
                     /locus_tag="RJ266_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354619.1"
                     /translation="MSKFALILSFFIALFMSACTNATFIQSFIQTSNEGIFIRSQKQQ
                     SFKISFQNPSQLRTTLDRDLALKLKNLGLKEVKENADYEILINLVDMKKHSYAQKITT
                     SARFFYDFDPLESDGEWMVENYYTMQVNLQINSKNHNSQKTSLLARTAYLGNKERCQL
                     SLENKIINQIVSFFYF"
     gene            complement(19315..19806)
                     /gene="fldA"
                     /locus_tag="RJ266_000857"
     CDS             complement(19315..19806)
                     /gene="fldA"
                     /locus_tag="RJ266_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HDV7354620.1"
                     /translation="MSVAVIYGSAMGNTEGAANTIASKLGISDVFNISDIDAAKMNSY
                     DKLICGTSTWGSGDLQDDWDGFDFSGLSLGGKTVAVFGMGDSESYSDTFCGGMGKLAQ
                     NLKDAGANLVGEVSTDGYTFEASDAVVDGKFVGLALDNDNQEDQTESRIDAWVEQIKP
                     YFA"
     gene            complement(19806..20501)
                     /locus_tag="RJ266_000858"
     CDS             complement(19806..20501)
                     /locus_tag="RJ266_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354621.1"
                     /translation="MLFGFDDKQEFIPQIYRYLNNQELMLTFLTQYNASVDSALKIPL
                     LYAKNTKSLKMIFGNFLHNIMHVSFGKIQNINIKLNTYAFYFQKRKSLIFNTKISKNV
                     DLLRLLRIYLYGICFDAQILFSSYVYDKVSFQNNGKNIDQDGDLIIIDKKFAILPLCK
                     EINTHNLEIENEIYELLNLIKENNFEKFYIVCPRNKNFTHFIEIKHFLCDLNKTMLKL
                     VPYKISNQIIRRK"
     gene            complement(20504..20818)
                     /locus_tag="RJ266_000859"
     CDS             complement(20504..20818)
                     /locus_tag="RJ266_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2325 domain-containing protein"
                     /protein_id="HDV7354622.1"
                     /translation="MSVLVIGADEITPIRAVLHDLGAKKIEHWDARNENRVNRKPIPC
                     DTECIVMLTSFLNHNTMKKIKNEAKKRKIPLVCAKRSVSCVYCEYCKIFNLNKEFSCY
                     KG"
BASE COUNT         7354 a         3142 c         3260 g         7079 t
ORIGIN      
        1 taataatctt aacaaaaata tcttttattt tggctttttc tataaactct ttttcagtaa
       61 gcaaaaatta taatgcttta tttaaaaaca gcaaaagagt aaaattaaaa tgaaaaattt
      121 aatcaccaaa ctagaaaatg aagaaagatt aaaccaagaa gaagccaatg cactttggga
      181 tctagatctt tttaccttag gcaaatacgc tcacaaaaaa cgcactaaac ttcatggaaa
      241 aaaagtctat tttaatatca atcgccatat caacccaact aatatctgtg cagatacctg
      301 taaattttgc gccttttcag cgcaccgaaa aaatcctaat ccttatttga tgactcatga
      361 agaaatcatg aaaatcgtcg atgaaactgt aaaacgagaa accaaagaag tgcatatcgt
      421 ttcagctcac aacaaagata caacttggca atggtattta gaaattttta aaatgataaa
      481 agaaaaatat cctaatcttc atgtaaaagc tatgactgct gctgaaattg attttttaca
      541 tcgtcgtttt aaaatgagtt atgaagaagt gatagaaaaa atgcttgaat acggcgttga
      601 ttccatgcca ggcggtggag ctgaaatttt tgatgaagaa gtgcgtaaga aaatttgtca
      661 tggaaaagtt agcagtgaaa attggcttaa aattcataaa ctttggcatc aaaaagctag
      721 acaaagtaac gccactatgc tttatgggca tatagaaaaa agagaacata gaatcgatca
      781 tatgctaagg cttagagcct tgcaagatga aacgggtggt tttaacgcct ttatcccgct
      841 tgtatggcaa aaggataata gctttttaga tgttaaagaa cagcttgata gcgaagagat
      901 tcttaaaacc atagccattt cgcgtttagt gcttgataat atcaaaaata ttaaggctta
      961 ttgggcgact atgagtttaa atttagctat ggtagcacag gaatttggag caaatgatct
     1021 agatggcacg atagaaaaag aaagcataca gagtgcagga ggtgcaaagt ccgctcgcgg
     1081 aacaagtttg caaactttca ttgagctgat taaaacctca aatttaatcc ctgtggaaag
     1141 ggatagtttg tataatgagc ttaaaattta ttaaaacata atataagttt ttttagctaa
     1201 aattcgtgtc tttaatctta aggacataat gaaataatga aaaaaagtat ttttttatct
     1261 tttataatag tttttaatgg ctacgccctt agcgatcaag agcttatcgg atcaaaagag
     1321 gcttataagc taacgattac cggagatggg attaatgttg gagttataga ctcggcgatc
     1381 aatggtgagc atcctagctt aaaaggtaag gttttagagc aaactttttc tacggttaat
     1441 ggcaagactt acacgcctga ttactcagta gatacgcacg gaagccatgt cgcaggcatt
     1501 ataggggcta agtatattga tgagaataag cctcacggcg tagcctataa tgctaaactt
     1561 tatggggtgc aaatttttgg caataataag ggtagtggaa gctttaatgc ccctaatgtt
     1621 tatgattatt ttaaagataa agatgtcaaa atcatcaata atagctggaa ttcaaccacc
     1681 tatcctgttg taagtatgac tcaaacaggg ctttatcttg atgcctataa aaataagtct
     1741 tctaacgagc tttttgagca aattcagcaa aactctacag ccaagcaact caatcaactc
     1801 gcaaaagaaa ataaaactct cgttgtcttt gcggcgggta atgagggtat tataagtccg
     1861 ggcattatgg ctttaagccc tctttataat gaggaattgc gttctttttt agcagtgggt
     1921 tctgtggatt cttcgcaaat tacaaaaaat caagatggca aactagtggt taatggtaga
     1981 ggtttatctg gttttagtaa tggacttttg ggagcggaaa attttagctt ggtagcaccg
     2041 ggttctaata ttaaaaatgt taatgctgct tatatgcaaa aatctagttt tgggcgtgta
     2101 gataaagatt tataccgcac acaaagtgga acttcaatgg cagcgcctat ggttagtggg
     2161 gcggcggctt tggtggcaca acgctttcct tttttaaatg gcaaacaaat cgccgatgtg
     2221 cttttaagta cggcaaataa ggactatata gctcctaaac tcacggtaaa agagacgaaa
     2281 ttgaaagttg tagaatatct tggtaaaaga cctatactta tggaaaaaac ctttcatact
     2341 attttttaca ttgatacaga tatccctaaa aaagcagacg gcagtgtgga taaagagcaa
     2401 gttaaacgag acctttctca agcgggttat tctagatttt atactcccat cacagaatat
     2461 cacggagtgg acgaaagcaa atatgcctct atccaaaaag tcagcaaaga aagtcttttt
     2521 gggcagggaa ttttagatgt agctaaggct atgaaaggct tggcgacttt ggacgcaaat
     2581 cgccttaata atagtgatgt ttcaaacact tacgctgggc aaaatgaggc gtattacaca
     2641 atcgatacac aaggatatga ggcaattttt agcaatgaca ttagccagaa aaagtgggac
     2701 ggaagcttac ataaaaaaga cgcaatcaat ttgccaacaa atttagcaaa tcttaatgta
     2761 ggatttatca aagaaggtag cggtaagctc atcttaacgg ggaataatag ctatgagggg
     2821 gtgaccatta ttaaaaaagg tagcttagct ttaaataata aaagtgaaaa tgaaaaagct
     2881 agaatagcag gtaatgtgaa agttttagag ggaggcttat ttagcggtaa tggcgaagtg
     2941 ggtaaaaacc tcgaaaataa aggcattgta agaccgggaa atgaagattt gagtgatttg
     3001 atcattgagg gtaaatacac acaagagggg caaaattcta aattgcaact tgattttggc
     3061 agtcataaaa attccaagct tatcgcaaat tcttatgaga ttaaaggcgg aaaattagaa
     3121 tatatccctt tgccgaattt ttttacaagt gggcattatg ttagcattga tttgggagat
     3181 ttaggaacgc gtttaagtag ttttggagcg gttgaggtag taagcaataa tgctgtggat
     3241 tttgtagctg ttttagatag tgataaaaca agcattaata aagataaaat gccccaaccg
     3301 gctccacaac cccagccaac tccgcaacca gacattacaa accctcagcc tccagtaacc
     3361 cagccaagcc caattacacc accgccaaca actactccac caacgaccac gccaccacct
     3421 aatcatatca tcgttaagcc agttattaaa aaagacgcat atgagagtgc gaatagcact
     3481 atggggcgat ccttaagaag cattcgctct atgcataatt tacaagatag atataaggac
     3541 tattttgcct ttttggataa tacagatacg aaaactatgg agaaaacttt agaaagtttg
     3601 gaggctaata gctatatgca aagtgcttcc ggactttatt atcagcagca cattttggca
     3661 caaagaaata tgatgagcgc tcttaatcca agctttactt ccgggaattt aatggcaagt
     3721 ttagaaaaag atcctttatt aacagctagt attgagagtg atgtttttat agatttgggc
     3781 ttattagata aaatggataa gcgttatatt tggaatctta gtcctaatta caaaaagatt
     3841 aacggcgata attttgacgg acgaagcacg ggcttaaatc ttaccatagg cggggcagtt
     3901 aatgaaaatt ccctattaag ctttgggtta gatgtgagtg atactagact agattttgaa
     3961 aatgccaatt tgaaaaataa atattttaat ttttcattta atcacatttt agatttgcaa
     4021 aattttaaaa ttctaagcgg tgcgagttta gcaagagcaa gtaatgatat gacaagagca
     4081 attataggac aaaatggctc tttaagctca aattatgaca atctacttag ctccttacaa
     4141 ttaggactag ctaaggactt tcaaattttt aataatttga ctttgacgcc tttggcgtat
     4201 tttaattata attttatcaa gcaagatgct tttagtgaaa atggcaatct tgtctttgct
     4261 aaatcttacg atacgatcaa tcatcatacc acttctttag ctggtggatt gaatttatcc
     4321 tatctttttg accgagaagc gatgcaaaca aaacttggaa gtttttttat ttatgaatat
     4381 aaattaagtg ggaaaacgat tgaaaataat gtgcgtttca aagattttcc taatcaagat
     4441 ttcgtgcaat atcatcgtct taactctaat cttatcactt gggggctaac ttcgtatttt
     4501 atttatccta attcgttttt ttatggattt aatgtagtta atgaatttgc tagcgatcaa
     4561 tataatatta atgttttggg tcaatttggt ttttattttt aagtcttttg atgtcaaaat
     4621 tgatgtgtag tttatgtaag gattatcaat gagtattttt aagcttaagg aaaatgggac
     4681 aaatataaaa acagaagttt tagcaggcat tacgaccttt ttgacgatga tttatattgt
     4741 ccctgttaat tctcacattg tgagtaacac aggtatgcct ttggaggctt tgattaccgc
     4801 tactgcttta atcactatca ttgcaagcgc acttaacgga ctttttgcaa acacccctgt
     4861 ggcgatgagt gtgggtatgg gaatgaacgc ttatttcact ttttcagtct gtatagcaca
     4921 gcaaattcct tggcagagtg ctttgggggc ggtgttttta tcaggcttga tttttttaat
     4981 tctttctttt acaaattttc gtctttggat catacgcaat atccctaaag atttacgcct
     5041 tgctatttgt gctggtatag gatgctttat agcattttta ggcttaagtc aaatgggtgt
     5101 gataatgcat aataaagata ctttagtcag cataggaaat ttcaaaagcc ctcatgtgct
     5161 ttttggaatt ttcactctag ctttaatcat ctttttttgg gctataaaac ttcgcggagc
     5221 ttttattttg ggggtattag taagctctat tattgcttgg attttccatt tagacaatgc
     5281 aagttttcct gtgcaaatct tttcttggcc aaattttagc atggaaaatg gtttaggggc
     5341 catcttttta caacttgata tcaaaagcgc cttaaatatt actatgatac ctataattct
     5401 tacttttttt atcactcaac tttttgatag cataggaact atcacaggtg tgggtgaaag
     5461 aggaaagatt tttgatgatc ccaaaaatgg agaaaaaaaa ctaagcaaaa ccttaatggc
     5521 agatgcaaca ggatcagcct taggagctat gacaggcact tctacagtta cagcttttgt
     5581 tgaaagcact acaggagttg aaagcggagg aagaacgggg cttacagctt tagttgtagc
     5641 tatttgtttt gcttttacac tttttttact gccacttttt aaagccattc ctgcaaacgc
     5701 aatatacccc gtacttgtaa tggttggaat tttaatgttt atggaagtta aaaatataga
     5761 ttttaaagat agtgctatag ctgtagcaag cttttttact attatcatga tgccttttac
     5821 ttactccatc accacaggtt ttgcttttgg ttttctttct tatttacttg taagaatttt
     5881 taaacgcgaa tgggataaaa tcaatcttgg cattatagtt ttaagtttat tatctttggg
     5941 taatttttta cttatggcac tacaataaat aaggatatat aatgatattt tactcctatg
     6001 aagaatttaa agaagatgta aaaattcttg ctaaagaaat taaaaaagat tttaatcctg
     6061 atgcactttt agctatagca agaggaggga tgagtttagg acactcttta gcagtagctt
     6121 taaaaatgcg tcagcttttt gctttaaact caattcatta cgatgataca aaaaaacttg
     6181 atactattga aatttttaac attcccgatc taagcaagca taaaaaaatt ctactcattg
     6241 atgatatagt agatagtgga gaaagtttag cagaaataaa aaaagttttg cttgaaaaat
     6301 ttcctcatat agaacttaaa attgcaacca ttttttataa aaaaactgct cttttagagc
     6361 ctgattttaa agtaaaagaa gctactgaat gggtggattt ttactgggat ataaatcttg
     6421 attaaaaatt tgctataatt ttacttttaa aatttttagg agtttttgct tgagaataaa
     6481 atttatatct tttattttaa ttttttttac tatttttgct tttgctaaag aacaaaattt
     6541 agatgatttt gaacaagaat accaaaacta tcaagtaaac gatccacttt caggatataa
     6601 caaagctatg acaagcttta atgtggcttt gtatgattat ggtttgcgtc ccgttcttaa
     6661 gggctataac gctatcactc ctgaatttat aagattagga gtaagaaatt tctttgataa
     6721 tttacttgct cctttgcgtt ttgtaggcaa tgttttgcag tttaaatttg aagaagcggg
     6781 agaagaattt aaaagattta ccgccaatac catcatgggt tttggtggac ttatggatgt
     6841 ggcatcaaaa atgggtctta aaaaacatcc cgcggactta ggaaccgttt tgactcactg
     6901 gggtgtagga agcggttttc atattgtctt acctatactc ggccctagta atcttagaga
     6961 tactcttgct ttacctgcaa cttggtatgc aagttttact gcttacattg atcctacttg
     7021 ggcaagtata gctataagtg cttatggatt tggtaatgaa cttagtttta gacttgatga
     7081 aattgatgaa atttatcaca acacgcctaa tttatatcca ttcttgcgtg atgcttacga
     7141 gcaaagacgc aatgaactta gcaaataaag gaaaataatg aaaaaaatat ttttaatctt
     7201 ggctttattt tttaatgctt ttgccttaca gctagatgaa atttctagta ctatgcaaaa
     7261 aaacattgat gcaagcttaa aacttttaca agatagcaaa gaagacaaaa aacaagctgc
     7321 tgatggaatt tttaaacttt ttgatagcat aatagattat aaactcatgg caaaactcag
     7381 tctttcgaaa aattattcta aattaaatcc aaaagaacaa gaaaaattta ccacagcctt
     7441 tgaagcaagt cttaaaaaaa gttttaccga taaactcagt ctttataaag atcaggtttt
     7501 aaaggtcaaa aatggtgagt taaaaaatga aaaacgctat tttttaacca cttctatggt
     7561 agtagatggg gaagaaaaaa atatcatttt caaattttac aatgataata acaactggct
     7621 tgtttatgat gtggatgttt taggtgtgag tatagtacaa acttatagat cacaatttgg
     7681 cgatatttta gccaaccaag gctttgatgc cctacttcaa aaacttgaga gtattgtcat
     7741 agaataatgt ttgcaaagct tttaaagttt tttatttctc gtccaaaaag tacttttttt
     7801 ggaaccttgt ttatatgcct gtttttaagc ttttttgctt ttaagcttag cgtagatgca
     7861 agtgctgaaa gtttactttt agaagatgat gcagatttaa aaacttttag agaaatttca
     7921 aaacattata aaagtgataa ttttttactt ttagccttca aaccctatga tgaaaaacct
     7981 ttttcaaatg aaaatttagc caaattaaaa aaacttcatg aagaattaga aaatgcccct
     8041 ttagtagagc gcgtttttag catcatcaat gcccctttgc ttcaaagttc acaaaatgcg
     8101 gatttaaaag aactgttaaa aaatatccca aacatagaaa gccaagatat aaaccgcaca
     8161 aaagcccgaa atgaaatttt aaatagtccc ttttataaaa ataatatcat ctcaaaagat
     8221 ggaaaagtaa cagggcttat tatttactta aagcctgata cagtttataa tgatcttgta
     8281 gaaaaacgcg atcttgctac cgatgaaaaa gaaaaagatc aaattcgtct tgctataaaa
     8341 aaacatcaag acaagcaaaa agttatcacg aaacaaagtc tagatactat taaaagcata
     8401 gttcgaaatt atgaaaaaaa taaagatacg ctctaccttg gtggcgtaag catgatcgct
     8461 gatgatatga tagcttatat aaaatctgat cttgtgcttt atggtgtttc tcttgtattt
     8521 ttactaggac ttgcacttta ttattttttc cgctcatggc gctttgtttt tttacctctt
     8581 tttatttgtt ttataagctt aagtgcggct agtggagttt ttgcgctttt aaattttcaa
     8641 atcacggtta tttcatcaaa ttacgttgct ttggttttaa ttatcacctt aagtgtagtt
     8701 gttcatttga tcacgcattt tatcgaaagc acccaaaatc atcccaaagc taaagttgag
     8761 cgcatagtgc ttgaaacctt actagccaaa gcaaatccta gcctttatgc cattgttaca
     8821 acgatgatag gatttttttc tttaatccta tcaaatatcg aacctatcat aaaacttggt
     8881 attatgatga gtataggtat aggtttagct cttatcttta gttatttatt tttagcaagt
     8941 atcttggttc ttttaaaacc aaaaaattat cataaaaaag agtttaaatt taatctttta
     9001 gccttttgtg ccaaaaccgc tcttgatcct aaaaagcgtc gcatgattta tggaatttca
     9061 gttcttgcta taatcttagc tttaataggc atttcaaaac tcagagttga aaattctttt
     9121 gtcaattatt tcaaagatgg tagtgaaatc aaaaaaggac ttttggttat tgataaaaat
     9181 ctaggtggaa ccttgccttt agaagtgatc attcgttttc caaataataa aaacgataaa
     9241 aatacaagtg atactcttga tagttttgaa agtgaatttg aaaatttagc cacacaagaa
     9301 acttattggt ttgactctaa aaaaacacgt attgcaaaaa aagttcatga atttttagaa
     9361 aacaaagaat ttgtaggctc ggttttaagt cttaatagtc ttttaaccct agggaaaaat
     9421 atcaacgatg gaaaagagtt agatgatttt gctcttgcat ttttaaatga gaatttacct
     9481 gccaaattta aacaagactt actctcacct tttgtaagta tagaaaataa cgagttaaga
     9541 tttagcatgc gtattgttga ttctgatccg aatttaagac gtaataagtt tttaatagat
     9601 cttaaaaaac agcttaacga gcttgtaaaa aacgatggag tagaagtgca aatcacaggc
     9661 ataatggtgc tttataataa tatgctccaa agtctttttt catcgcaatt tgatactctt
     9721 atatttgtaa ttttagctat ttttatactt tttatcattg tttttagaga tttaaaattt
     9781 tcagttgcgg ctatattcgt aaatgttatt cctttaagtg tagtttttgc tcttatggga
     9841 cttttaggta ttcctttgga tatgatgagt attactatag ctgctattgc tataggtata
     9901 ggcgttgatg atgctataca ttatatttat cgttttagag aagaaattaa aaacaaaagc
     9961 ctagaagaag ccattatgat ttctcacctt agtataggtt cggcacttta ttataccaca
    10021 attagcatag ttttaggttt tagtgttatg atgagtagta atttcattcc aacgatttat
    10081 tttggaattt taaccgtttt tgtaatgatt ttgcttttaa gtggaagttt gttcttatta
    10141 ccaagctttt taatcactat ttattctaag aaaaccaagt ttccaaacca acataaagag
    10201 catatattaa aacaataata gctatatatt ttaaaaaatt tttcattttt atcctttatt
    10261 taaaatcttt aaaatgattt ttgcaagctc taaagcttta aaacgatgag agatattatt
    10321 cttctcatcc acgctaagct gggctaaggt tttatcaaaa ccctttggaa taaaaaggct
    10381 atcataacca aaaccatttt cacctttttc tgtatctatt acttttccat gcatggttcc
    10441 atgcgtacta aattccccca tcaaacctac catagcaata gcagcaacat aatatgcctt
    10501 actttgttta aaaccttttt ttatcatttc attgacaagt ttatcacggt tacttttatc
    10561 atcgccctta ccgctaaatc gagcagaata aattcctgga tttccttcta aaacatctac
    10621 acaaatgcca ctatcatcac ttaaagcgat aaaatctttt ttttgctttt catccaaagc
    10681 attaaaaact gctcttgctt taatcaaggc gttttcttta aaagtttttc cattttcttc
    10741 aatctcaaaa ggcattaaaa cttcatcaaa agcataaatt tcaaaatctt tcaaaatttc
    10801 tttaagttct aaaaccttat gcttattgct cgtagctagg ataatcttca taacaaaagc
    10861 tccaaaataa tatcaaaaac aaaaatatga ttttataaaa tttatccttg tgcgtagctt
    10921 ttaaatatca aatgataaaa cgatgttaat caatgcttaa tccatttcat agtaaaatta
    10981 tcctaattta aatttcaaat ttaataggaa attgataatg ctaaataatg tcttaccctt
    11041 atctttcata gttggaacaa gattttttgg gctttttata gttttgccag ttttaagtct
    11101 ttatgcttta aaacttgaag gtgctaatga atttttagtg ggacttttag ttggtgttta
    11161 cgccttaacc caaatgattt tacaaatgcc ttttgggatt ttaagtgata aaattggtcg
    11221 taaaaaaacc atgctcattg gactgattat ttttataata ggctctttaa tctgctcttt
    11281 tgcagaaaat atttacacca tgcttttagg gagaatgctc caaggtgcag gagctattgg
    11341 agcagtagct acggcaatga taagtgattt tatcacagaa gaaaatcgtg gtaaagccat
    11401 ggcggtaatg ggctctttta taggacttag ttttgcagcc tctatggtca tttctcctct
    11461 aatgagtgca aaatggggtt tatctagcct ttttgatctt agtgcggctt tgtctctttt
    11521 atgtataatt ttactttata ccgttgtacc taaagaaaat aaaatcactc atgaaaatga
    11581 aaaaactcct ttttttcatc ttattaaaca aaaaaattta gcccttatga atcttactaa
    11641 tttcatgcaa aaaatgctta tgagtatagc atttttaagt attcctatta ttctagtaaa
    11701 acatttaggc tttgcttctg ataaactttg gattgtttat agcgcttcta tggtagcagg
    11761 ttttatcgct atgggctttg ctggaagttt aggcgaaaaa agaggtttag ctaaacaaat
    11821 tttactctta ggaattgttt ttttcatact ttcttatctt ttttttactt ttagtaattc
    11881 tattgatttt tttatcatag cagttgtgat tttttttata ggttttaatt tacatgagcc
    11941 tattatgcaa agttgtgcat caaaattttg taaagttcat gaaaaaggtg cagcattagg
    12001 gttgtttaat gcttttggat atggtggaag ttttataggt ggtattattg gagggatatt
    12061 tttacatcta gataccttaa atcttttagc tattatttta gtaattttag ctctaatttg
    12121 gcttgtggca ttatttttct taaaaaatcc agctgatttt aaaaaccttt atctaccttt
    12181 agaaacgcct ttaaatttca gtacttttgg tgaaaattta ggggttgtag atatttataa
    12241 aaactctaaa aatcttgttg ttaaatttga tagcaaactt acaagtaaag aagaattaga
    12301 aggcaaatta tgaaaaaaat attattttta ttctgttctt tttttctagc ttttgcaaaa
    12361 ccaagtctag agatacccaa gctctcaaaa caagcaaaac aaaactttat tttagaaaat
    12421 gtcaaattta attataatgg cacaatatat aaaattttta tagctaaaaa caagaatgaa
    12481 aactcaaatt ataaatataa aatcatttat ttactcgatg gaaatgcctt ttttcctctt
    12541 tttttaaatc ttttcaacac tcctgtcaaa gaaaatcttt taattattgg aataggttat
    12601 gataataatt tagcttttga tacacaaaaa cgcactaaag attatacgcc tacaacaaat
    12661 ttaaataaac aaggtggagg tagtaaagaa tttagaaatt tcttaacaac ccaactcatc
    12721 ccttatatca acaaaatgta tcctattgat tttagccatc aaattctctt tggacattct
    12781 tttggaggac tttttgccat tgatacactt ctttatgata gtaagatttt tagtcattat
    12841 tttattattt caccttcttt atggtgggat aatagtgagt ttttacctaa tatcataaaa
    12901 ttacaaactt gccctaaaat ttacatcgga ttaggttcat tggaaacaaa ttcaagtatt
    12961 atcaaaggtg tagctaagct caatgctcaa aaacttagcg aaaaaatatc caaagaaact
    13021 aattgtaaaa ctcattttaa actttttaaa aatgaaactc atggaagtgt catatctaaa
    13081 gctatgctgt ggatgaaaaa gcttcttgat cttaattaat cattgctttt atcatcactt
    13141 ttgccttgca atctgcacag caataaagtg ttttgatttt attctcatca ttaccaaatt
    13201 taggtttcat taaattggct attttttcta cagctttttt ggtagcaaat tctttaccac
    13261 attctataca ggcaaaaagc tcatcttttg ccatggtttg atattcaaaa taagaagctc
    13321 taaactccat tccactacga aataatttta aagtatcttt ttcggcacaa cttaactcac
    13381 aatacccaca agtcgtacaa agagaagcat tgaatttcaa agcattttct tgtttatcag
    13441 cgattaaagc tcctacatta caggcaccaa cgcaagaaag acaaagcgta caggtgttag
    13501 gattgatttc taccttacca taacgcaacc attcgccact ttctatacta ccaaaatctt
    13561 cattttttat catttcttgc attcttttgg caaaattttc tcttgtagtt aaggtgttat
    13621 tatgaaaatc atattttaaa tcttgtataa attcttgctc ttttaaaaca ttttgcaatt
    13681 ctttctcatc tttagcaaca aaaatagctt ttttttgaaa ttttctctca aaaaaagtat
    13741 ttaaaagtgt aatggcttca ttgctaccac gagatacaaa atccgtataa aaaaccaaat
    13801 ttgctccact attttgcaaa agcgttaaaa aatgcataga agaaagccat ttttcaccct
    13861 ctatcataaa gggtaaaaca tcttttggta aagcaagatt taaattttct aaagacattt
    13921 ttttaggaat gattaaaatt tttttatctt tataaaactc gcaaaggata aaaaaacttt
    13981 ctcttggcat aggagcataa tcaagcgatc cgctaggaca cacgctaata catcctccac
    14041 aacccaaaca atccacttga gaaaattcca aatgtttatt ttcatcatct tttaaaatcg
    14101 ccacagtagg acaaatttca gcacattttg cacaatgctc actgcgtctt tcgtggtatt
    14161 gacacacgct agcattatag ctaatataag ttttataatg atattttgga cttttgcttt
    14221 gtaaaaactc aagcaatact tcaagatttt caaaatttaa aagattataa catccgcttt
    14281 gtcttgtaaa atctttacgc acaacgctta aatcttcagc tttaaaaagt aaaaaatcaa
    14341 aatctatttc cacttcttcg ccttgatttt taaccacagc acaaagctcc cctacacttc
    14401 caaaaacagc taaaatttct gcactgctta aagcaataac cttaaatcca tgttctttta
    14461 aaaactctac ggtttgagta tcactatcta ctaaaatcaa acgattttgc acttctttgc
    14521 tttgttctaa atcaagccct aaatcataaa cgctagccct tgcttcataa agcgttaaaa
    14581 catttttact ttgctctaaa atttcatctt gagaattttt aagataaaaa ttaatctcag
    14641 gggcataaat ttgtgctttt tgatttttat cattgcaaat taatacttct ttatcattta
    14701 cctgatctaa aatttcaata gcatcgggca aagggatcaa aacatcattt tttatataaa
    14761 caaaatcttg cattgtcttc cttaatctct ttaaaacatc attttataaa ttctatgtta
    14821 aaataaccaa atattttctt aaggcttaag atgaacaaat ttagaacttt tccacaaatt
    14881 aacactctta ttgaagatga gagtttaaaa tcctatcctt tttatatcaa agcatttttt
    14941 tgtaaaaaag ttgtcgcaaa actaaaagaa aatttttccc gagatgaaat ttctaaagat
    15001 aaactacttt tagaaatcaa aaaagaaatc aaaacttttt accgcaaaga tttacaaagt
    15061 gtgattaatg caagcggagt ggttatacac acaaaccttg gtagaagtgt aatccatgaa
    15121 aaactttatg aagcgtgtaa agatataatt tgtaattatt ctaatgtaga gtttgattta
    15181 gaaaatggaa aaagaggttc tcgctatgct ttggtgttgg aaaaacttaa aatgcttttt
    15241 gaatgtgaag atgctttagt ggtcaataac aacgctgcag cagttttttt agtgcttaat
    15301 tctctttgtt atgataaaga agtcataagc tcaagaggag aacttgtaga aattggcgga
    15361 agttttcgca tacctgaagt gataagatct gcaggtgtaa agctttgtga agttggaact
    15421 agcaacaaaa cacacttaaa agactatgaa caagctatca atgaaaatac cgctctaatt
    15481 ttaaaaaccc acaagtctaa tttctctctt atgggttttc acagtgaagt aaatataaaa
    15541 gacctacatg aactagcaaa agaaaaaggg cttttgagtt attatgatct aggttctggc
    15601 tggtgtgaaa atttaaacga aaaactgatt aaaaatgaac ctaaaatcaa aaaactcgtg
    15661 caagaatgtg atattttaag ttttagtgga gataaacttt ttggtagtgt gcaagcaggc
    15721 attatacttg gaaaaaaaga actcatagaa aagcttaaac aaaatcaact tttaagaatg
    15781 ctaagagtgg ataaattaac cctatctttt ttaaacgaaa gcttaaaagc ttatttacaa
    15841 aaagattatg aaaaaattat taccttaaaa cttttaaatg atgacttatc ctttatagag
    15901 aaaaaagctt taagagtgca aaaagaatta aaatttcaaa cccagcttaa aaaaagcaaa
    15961 agtttagtag gaggaggttc tatgcctgat aaaagtttag atacttatat actaactttt
    16021 caaggagatg ctttaaaact acaaactcga tttagaaaag aaaatattat aggacgcatt
    16081 gaaaatgatg aatttgttct tgattttaga actatacgag aaaatgaact tcaaaaactt
    16141 attcttacaa tcaatcaaat ggaaaactta tgaaatctgt tattatagga actgcaggac
    16201 atattgatca tggaaaaact tcactcatta aagctttaaa tggttttgaa ggcgatagtt
    16261 taaaagaaga acaagaaaga caaatcacca ttaatttaag tttttcaaat cttaaattaa
    16321 aagataaaaa catttctttt atcgatgttc caggacataa agatttggtt aaaactatgg
    16381 taagtggagc ttttggcttt agtgtttgtt tatttgtcgt agatattaac gaaggtttaa
    16441 aagaacaaag tttagaacat ttagaaattt taaaaattct tgatattaaa aatatcattt
    16501 tagtgcttag caaatgcgat ctttgtgaaa atatagagca aaaaagtgta gaaattttag
    16561 aagagttaaa aaatttagat tatcccattt taaaagtatt tcgcaccagt ataaaaaata
    16621 atcaaggcat agaagaatta aaaaattatc tttataccat agaaaacaaa gaaaacgaag
    16681 aagagctgat ttttcattat tatatcgata gagttttttc tctaaaaggc ataggaaccg
    16741 tcgttacagg cagcttgaat gaaggaagta tcactttaaa tgaaaaaatc atctgcttag
    16801 acactcaaaa agaactcatt gttaaaaata tacaaaatca cgatatcaat ctagaacaaa
    16861 tcaaagcttg taaccgtgtg gctttgagtt taaattgtga ttataaagag ttaaaaaaag
    16921 gttatttgct aagtaaaaaa ggttatttta aagcctttaa agaatgcgat gctttagtta
    16981 aagcaaaaaa tttacaaaat agcaaaatga ttttttgcgt gggttcaaga caaatagaat
    17041 gcaaaataaa tatattaaaa aaactagaaa atgatgaatt ttttgtgcat tttagttttg
    17101 ataaaaatgt atttttaagt tttgatgagg cttttatttt attacaaaac aatcgtgtta
    17161 taggcggtgg taaggtttta aatcctttaa gcgaaccttt aaaaaaagaa caaaaaaata
    17221 aatttttaat gtttttgaaa aataaagatt ttaaagcagc tttttctttc ttaaaaaacg
    17281 cacataaata tggttttggt ttgctttcaa gctatcaaag atttaaactc tctcatcaaa
    17341 aagcattgaa attagcaaaa gaattaaatc aagtatttgt cgatgaaaaa aatcttaata
    17401 tatatcattt acaaagccta gaagaaatta aaaatttcat caaattcata cttgaaaaaa
    17461 atccttatgc catgctttca gcacattctt tagctttaag gattacttgg gcaagtgaaa
    17521 atttttgcga acttgggctt aaagagatgt caaatttatt ggattttcaa aatggaattt
    17581 attttaaaaa aggcatagat tttgaaaaac ttcaagaaaa aaacaataat caattatatg
    17641 aaattttaaa aaaacaaggt attaaacccg aagctcctta taatctttat gattttttag
    17701 aacttgatag aaaaagcggg gacaatatac tcaaaaaact tacccaaaaa ggcttggttg
    17761 taagactttc acacaatctt tttatagaaa aacaagctct tgaaaaactt atgcaagaat
    17821 gtttaaattt attaaaaaat caaagtcttg atgtgcaaag tatgaaagaa tattttaatc
    17881 tttcaagaaa gtatgctatt gcttatttag aatacttaga caaatttcct caagtaagta
    17941 aagaagctga aaaaagattt ttaacaaaca tttagaaaat cattatagaa ttaaacataa
    18001 tttatttaaa ggatttataa actatgaaaa aattaagttt aattcttgcc tgttcagcat
    18061 ctttgtttgc tgcaagtaat tcagaaatta gtgattttta ttcaaaaagc attaaagcac
    18121 aatttccaaa tgctaccgtt agtgtatcaa atcgtcaaaa ggttggtaat acgggttttg
    18181 aaagtgttat tgtaagcgtt gaattaaatg gacaaaaaca agaaaacatt ctttttacaa
    18241 aagatagtct tattacccct gatcttatcg acttgaaaac gggaatttct tatgctcaag
    18301 aatatgaaat gaaaaaattt caagaagcaa gagaaaattt tacaaaaaat gctaaagctg
    18361 tagcacaaaa agaaaccatg gtaatagctt tgggagataa aaataaacct gcaatttatg
    18421 ttttttcgga tcctgaatgc ccttattgta gagaacattt agctcaaatt gatgatgaac
    18481 ttaaaaacta tcaagttaat tatattttaa ctccagtaca tggaaaatct gcttttgaaa
    18541 aatccgctct aatctacaaa gaagcaaaaa aagcaaaaaa tgataaagaa aaaatcgcaa
    18601 ttttaaacaa atactatgat gcaaatatca aaaattatcc aaaagtaagt gatgcagaat
    18661 taaaagaagt tttttcctta tatgaaaaat atcgctcatt aggtcttagc gctactccaa
    18721 ctattattaa ataaacctaa tgtctaaatt tgctttaatt ttaagctttt ttatagcact
    18781 ctttatgagt gcttgcacca atgcaacttt catacaaagc tttattcaaa caagcaatga
    18841 aggcattttt atcagatcgc aaaaacaaca aagttttaaa atttcctttc aaaatcctag
    18901 ccaacttcga actactttgg atagagattt ggctttaaaa cttaaaaatt taggcttaaa
    18961 agaagtaaaa gagaatgcag attatgaaat tttaatcaat cttgtagata tgaaaaagca
    19021 ttcttatgct caaaaaatca caacttcagc aagatttttt tatgattttg atcctttgga
    19081 aagtgatgga gaatggatgg tagaaaacta ctatactatg caagttaatt tacaaatcaa
    19141 ctctaaaaat cacaattctc aaaaaacaag tcttcttgca agaacagctt atcttggaaa
    19201 taaagaacgc tgtcaattat ctttagaaaa taaaattata aatcaaatag tgagtttttt
    19261 ttatttttaa gaaaagacaa tcaagagtat aaaaactctt gattttaaga attattaagc
    19321 aaaataaggt ttgatttgtt ctacccaagc atcaattctt gattcggttt gatcttcttg
    19381 attatcattg tcaagagcaa gtccaacaaa tttaccatct acaaccgcat cgcttgcttc
    19441 aaatgtataa ccatcagttg aaacttctcc taccaaattt gcacctgcat cttttaaatt
    19501 ttgagctaat ttacccatgc cgccacaaaa agtgtcagaa taactttcac tatcacccat
    19561 accaaataca gctacagttt ttccaccaag actaagccct gaaaaatcaa aaccatccca
    19621 atcatcttgt aaatcaccac ttccccaagt tgaagttcca caaattaatt tatcgtaaga
    19681 attcatttta gctgcatcaa tatctgagat attaaaaaca tcactaattc caagttttga
    19741 agcaattgta ttagccgctc cttctgtatt tcccatagca ctaccataga ttactgctac
    19801 tgacattatt ttctccttat aatttgattt gatattttat acggaactaa ttttaacata
    19861 gttttgttta aatcacacaa aaaatgtttt atttcaataa aatgtgtgaa atttttgtta
    19921 cgcggacaaa caatataaaa tttttcaaaa ttattttctt ttattaaatt caataattca
    19981 taaatttcat tttcaatttc taaattatgt gtattaatct ctttgcaaag tggcaaaatt
    20041 gcaaatttct tatctattat aataagatca ccatcttgat ctatattttt tccattattt
    20101 tgaaaagaaa ccttatcata aacataggag ctaaataaaa tttgcgcatc aaaacaaatg
    20161 ccataaagat aaattcttaa aagtcttaaa agatcgacat tcttagatat tttagtatta
    20221 aaaatcaagc tttttctttt ttgaaagtaa aaagcgtatg tattaagctt gatatttata
    20281 ttttgaatct taccaaatga aacatgcatt atattatgca aaaaatttcc aaatatcatt
    20341 tttaaactct tggtattttt tgcatataaa agaggaattt ttagagcact atcaacgctc
    20401 gcattatatt gagttaaaaa agtcaacata agctcttgat tgtttaaata gcgataaatt
    20461 tgcggtataa attcttgctt atcatcaaat ccaaataaca tctttaacct ttatagcaag
    20521 aaaattcttt attaagatta aaaattttac aatattcaca atacacacaa cttacacttc
    20581 tttttgcaca aactaatgga attttacgct ttttagcttc atttttgatt tttttcatag
    20641 tattatgatt taaaaagctt gttaacatta ctatacattc tgtatcacaa ggaatcggct
    20701 tgcgattaac tctattttca ttacgtgcat cccagtgttc tattttttta gcacctaaat
    20761 catgtaaaac agctctaata ggagtgattt catctgcacc aataaccaaa actgacataa
    20821 attctccttt gtgat
//
LOCUS       DAPIWB010000029        20604 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.030, whole genome shotgun sequence.
ACCESSION   DAPIWB010000029 DAPIWB010000000
VERSION     DAPIWB010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20604)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20604)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20604
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.030"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            27..455
                     /locus_tag="RJ266_000860"
     CDS             27..455
                     /locus_tag="RJ266_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002852434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354623.1"
                     /translation="MKIDTLTKNFSNYQTQINKNNDLASNVHSDNVVKIQISDEARSL
                     SQANSKNEKEYEIKVSQEKIENHKDQNSIQSSKGGGNPALEALIAKLAEILAKIAELT
                     QKMTNANEQMKTTFQKQIDVLKSQADVIQAQIQELQSQQA"
     gene            521..1777
                     /gene="murA"
                     /locus_tag="RJ266_000861"
     CDS             521..1777
                     /gene="murA"
                     /locus_tag="RJ266_000861"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HDV7354624.1"
                     /translation="MTYLEIEGTNHLSGNVTISGAKNAALPLIVSSILAKNEVKINNV
                     PNVADIKTLISLLENLGAKVNFQNNSALLNTNTLNQTIAKYDIVRKMRASILTLGPLL
                     ARFGHCEVSLPGGCAIGQRPIDLHLLALEKMGANIQIKQGYVVASGNLKGNEILFDKI
                     TVTGSENIIMAAALAKGKTKLLNVAKEPEVVQLCEVLKDAGLEIKGIGTDELEIYGSD
                     GELLEFKEFSVIPDRIEAGTYLCAGAITNSKITLDKVNATHLSAVLAKLHQMGFETLI
                     AEDSITLLPAKEIKPVEIMTSEYPGFPTDMQAQFMALALKANGTSIIDERLFENRFMH
                     VSELLRMGADIKLNGHIATIVGGKELNAADVMATDLRASSALILAALAAKGTSKVHRI
                     YHLDRGYENLEEKFKDLGVKITRLEE"
     gene            1774..2934
                     /locus_tag="RJ266_000862"
     CDS             1774..2934
                     /locus_tag="RJ266_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HDV7354625.1"
                     /translation="MKNIFETLKDLENQISCLDESELISLEKAKDRILAKDLYARKNL
                     PSFDNAALDGYAFNYTDINEALEIKGTIFAGDKNFYTVAKNECYKIMTGAKMPKNADT
                     ILMLEDEYIEENKLIIKKTPKQYNAYRYKGEELKKGEILLQKGTKLNDKHIALLASQG
                     LYKIEVIRKIRIGIFSSGNELKEPWQECDEESIYNANALPLLTMFQNASYLGIIKDNF
                     KSTKEALENTNFDLLITSGGASVGEADFMEKALDELGFTPLFKGLKARPARPTKLYRK
                     GENFVLILPGNPMAAYLSCFIFAKKIINLLSENLDNPLTFYGKMGMDLKLKSGRNNLI
                     LGNLEKDIFTPFNENKFGSGMILPLIKSEFLLISEENISELKKGDEITLLKI"
     gene            complement(2956..3804)
                     /gene="lepB"
                     /locus_tag="RJ266_000863"
     CDS             complement(2956..3804)
                     /gene="lepB"
                     /locus_tag="RJ266_000863"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDV7354626.1"
                     /translation="MEILKKLYKFSQSWTGTVVIVLLVIFFFIQAFVIPSGSMKNTLL
                     VGDFLFVKKFSYGIPTPHIPWLEIPVLPDFNKDGHLIKAQGSQRGDIVVFRNPRNEKE
                     HFVKRCVGTGGDRIVYANKTLYVRMHEGDEFMKEHYPNDLVTLGGQIYVKEPYKQKGI
                     HYDPKKDIESDILRFLSIGDFAMSPTYIKELGNHIGFSGGNAYVFDVPENEYFMMGDN
                     RDYSYDSRFWGSVPYRLIVGKPWFVYFSWDKDKNVRWERIGRFVDTLENDEQYIHDHD
                     DEDKLS"
     gene            complement(3814..4662)
                     /gene="folD"
                     /locus_tag="RJ266_000864"
     CDS             complement(3814..4662)
                     /gene="folD"
                     /locus_tag="RJ266_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HDV7354627.1"
                     /translation="MTLLDGKALSAKIKEELKEKNQFLKSKGIESCLAVILVGDDPAS
                     QTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHI
                     CKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDA
                     VIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDM
                     VKKGVIVIDVGINRLESGKIVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKS
                     AKNRLN"
     gene            4742..5089
                     /locus_tag="RJ266_000865"
     CDS             4742..5089
                     /locus_tag="RJ266_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354628.1"
                     /translation="MKIVLMFFLFSISLFGADFITLKEYSKMLYENPRGISCKECHGA
                     DGSEQILGYYMKNGIKTTYKVPSIQNLSFENFKNSLNQSKDAKSIMPNYSLTNDEIVT
                     LYNYIKQFSKEAK"
     gene            5086..6360
                     /gene="hemL"
                     /locus_tag="RJ266_000866"
     CDS             5086..6360
                     /gene="hemL"
                     /locus_tag="RJ266_000866"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HDV7354629.1"
                     /translation="MTNKKAFKEACKFIAGGVNSPVRAFANVQSEPKFISHGKGAYIF
                     DIDGNSYIDYVQSWGPLLFGHCDKDIQKACQKALHKGSSFGAPTLLETELAKLVLSDF
                     PHLEKIRFVSSGTEATMSAIRLARGFTKKDKILKFEGCYHGHSDSLLVSAGSGAATFN
                     SPSSLGVLEDVAKHTLVAKYNDINSVKELFEKNKDIACVIIEPIAGNMGLVPAKQDFL
                     EELAKICKNNQTLLIFDEVMSGYRASYLGSYGINHIQADIITFGKVIGGGLPAAAFAS
                     RAEIMDILSPLGGVYQAGTLSGNPLAMAAGIASLTKAKKKTKLYDKLGKLAKKLTQGM
                     KKLADEKGLPLQVCHVGSMFGYFFTKDPVSNYQDALKSDLALFSKFHKNMLENGIYLA
                     PSQFETSFICSKMDDKIIDTTLEAVRESFKRI"
     gene            6357..6686
                     /locus_tag="RJ266_000867"
     CDS             6357..6686
                     /locus_tag="RJ266_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HDV7354630.1"
                     /translation="MSNILKEEKNHLENSNSKRQKIIRKTLEAADGLSLGISMVVAVF
                     IGVEIGYLLKKFTPYPWLFWLGVFWGISAAILNVYKAYKVQVKSYEEFKERDELIKEK
                     IQKEKNK"
     gene            6686..7189
                     /locus_tag="RJ266_000868"
     CDS             6686..7189
                     /locus_tag="RJ266_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354631.1"
                     /translation="MEHKKALFCIFAIIHLFFWIIFSSLNHFKLDTFLSYEIAFFSVL
                     LIIFASYLNYKKVIIKKSKNYEKDFNFISSLFIKKKQNLSKIIHFKVLKDDLKPNVKE
                     KIHFFAMFFTLFKLMAYVILVAGFLFLHRQDRLDIFAYICGISSLLVCVFIFILYIKK
                     YESKKNY"
     gene            7167..8354
                     /locus_tag="RJ266_000869"
     CDS             7167..8354
                     /locus_tag="RJ266_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7354632.1"
                     /translation="MSPKKIIKSMTALFAGMAFLFAGNALIVSSIGVILKENGESSLA
                     VGVVSSCFFVGALVGTISAHKIISRIGHIRSFGLFGAIFGISAMLHTVSENLIFWAVL
                     RFFIGICYYGLLMVIESWLNEKSKNAIRSRILGFYEIVFYLAFGIGVLIIALNLSKHS
                     VFILSATLILLSSLPLNLIKIKEPVLPASSPISIPKIFDIAPLAIVTSFIAGMLINGF
                     FSMASLFILLQGFDTKAVSYFIFCGVLGGFIAQTIIGTISDKLGRKFAIITCASIGFI
                     TMLIFIFFKLHLYMQYFLGITLGIGIFCLYALALARANDVLVNKNKGVELGRGVLFCY
                     SLGSLFGPLILGFLMQYFEIKGFIWFYIVSLAFLILFAINKPNILNKKFKKKPGNMVV
                     FDD"
     gene            8347..10443
                     /locus_tag="RJ266_000870"
     CDS             8347..10443
                     /locus_tag="RJ266_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HDV7354633.1"
                     /translation="MINTQLASQIANTQKNDLKVDNSASKDKTNLKDNPKEALAQALK
                     QNLGLSKDASSEEILAKFVQNETGTKLKELVNKLLDQINAQKNPDSPVLKQGKNLNLA
                     PNFANELKILSTELAKSDTFTQVLDRLNQILKPASEIKNNNLAPLFKNSGVFLEAKLK
                     DALNEELLPKSFHSLLSTIKGLSSEKLSVQIAQLANTNLSPKDTLKELKNIINSSKNE
                     NKQILNQSSFKALLNLSSKLENFKNYISKNPSYAQEKITPIANKILKELNSIKNDFFK
                     ALNKPENLMIKDPNILKQTATAFEKLENTLKNILGNQASKIQDKENILENLLSNKENM
                     KEEKLNHNTKNQDEEKHIKASKEETLTDDTKTDIKQNVKNEENLPKKEVNANLDSSTK
                     THEENIKENPKFYETKTESKTSINTNTNTNNTQNLNNSQNIQSNNNQTMQNIFKNQEF
                     IKQNIVKNLAFNVENLDLEQVQDLSKNLSNLSRRLNESLKELEPYTQNAKLNQAELKN
                     LEHKLNLSTKDLAQIKPKTEQDIAESLHHDVKSTLLQISNLAKNEGNEAVYNQANRLL
                     AQIEINQLMSLANDSINTYLPFSWDDLNDSKIMFRRGKKDKFFAQIKLEFAKLGDLEI
                     LISLNNEKYIDINIMAENIEFRKTIYENAHELKRNINKAGLLSANFFVGDIIRSKFDT
                     RNMKNLDLEMGMDKKV"
     gene            10440..10721
                     /locus_tag="RJ266_000871"
     CDS             10440..10721
                     /locus_tag="RJ266_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FlhB-like flagellar biosynthesis protein"
                     /protein_id="HDV7354634.1"
                     /translation="MSKIKRSIKKAVALGYQKEKNSAPKVLASGKGESAAKIISLAKE
                     HGVPIKEDEDLIEILSKLDLGDEIPPNMYKAVAEVFAFIYQMANKTPKN"
     gene            complement(10718..11518)
                     /locus_tag="RJ266_000872"
     CDS             complement(10718..11518)
                     /locus_tag="RJ266_000872"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDV7354635.1"
                     /translation="MSFSKESSRLFGFVAGIKFPKMIQKVINENYVKHFNIDMSEFKS
                     PCEYESLNALFIRTLQIPRKLEEGFISPSDGKILECGSTFLANEEHFAFSIKGHTYSI
                     EELLKDSFEKDELKNGLDYVNIYLSPKDYHRYHSPCDMQILSATYTSGALYSVNEKHL
                     ERISNLYVKNERVSLKCQNEKGIFWLVFVGAQNVGKMRFNFDISIQTNTKISHNFTRK
                     YENLNLKKGEELGNFELGSTIVLISQKGILNFNLKAGQGIKFGEKIAD"
     gene            complement(11515..12639)
                     /locus_tag="RJ266_000873"
     CDS             complement(11515..12639)
                     /locus_tag="RJ266_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDV7354636.1"
                     /translation="MIFLIFSFIVLLIFGLANVYIYKRLIKKITLFKYFYKIFAFIFI
                     VLFLAQAVFLIFRRDEYLSDTWYEILAMLYAPTYCLFFMTLAWDFVKLILALMGKRDK
                     KYNLILRLIFEFSLIVLSVFLIYISINNALKTPEVKSVDVEIPNLKQDLKIVMLTDIH
                     LGKNLHENFLDKLITKVNLQSPDMVVIVGDLIDTNPKDLKNYISKLNDFNSTYGTFYA
                     LGNHEYYHGINEVLDLLRKHTNMKILVNQNLDLGFINIAGLGDLAGLDRGLYAPDLAR
                     IKVDLNTSKASILLTHQPKTALLYDLSDFDLVLSGHTHGGQIFPFMFLVKLQQGFVHG
                     LYDLGEKTKLYVSSGAGFWGPSLRVFAPSEIVILNLKGKK"
     gene            12725..14020
                     /locus_tag="RJ266_000874"
     CDS             12725..14020
                     /locus_tag="RJ266_000874"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDV7354637.1"
                     /translation="MYRFAPSPTGDMHIGNLRAAIFNYICARQKNMDFILRIEDTDKA
                     RNIAGKEEEIKEILNLFGISWQHYYIQSENLKFHRQMALKLVSEKKAFACFCTEEELE
                     AKKELAKKQGKAYRYDGTCEKLADIDVLECEKPFVIRLKKPTHTMKFTDFIKGELSFE
                     PENIDSFVIMRTDKTPTYNFACAVDDMLENVTCIIRGEDHVSNTPKQEHIRASLGYNK
                     AMTYAHLPIILNEEGIKMSKREAHSSVKWLLESGILPSAIANYLIMLGNKTPCEIFTL
                     EEAIKWFDITKVSKAPARFDLKKLLQINREHIKMIKDDELNKILDLNKNLAQLAKFYT
                     QEASTIKELKEKMQAIFSTKDFGEFETECKILKELLKDIELFENYEDFKNELLSKSDL
                     KGKKFFMPLRIILTGNIHGPELSDLYLYIKNFIHELARI"
     gene            14023..14304
                     /locus_tag="RJ266_000875"
     CDS             14023..14304
                     /locus_tag="RJ266_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HDV7354638.1"
                     /translation="MVIDSFIISIFQVLQIVINIYTWIIIITALLSWVNPDPYNPIVQ
                     ILYKLSYPAYALVRKIPTRIGNIDLAPLIIVLALQFLGIFLGNILRSIL"
     gene            14301..15926
                     /locus_tag="RJ266_000876"
     CDS             14301..15926
                     /locus_tag="RJ266_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HDV7354639.1"
                     /translation="MIKKILVFLFIFSSLNATQYSIEKLKKEENSLAKDYYIYRLLEK
                     NKISKKDAQDLNSHIFRYIGKIKSELEKIIPLKPYINPKYAKCYTYTANTILDANLTC
                     QSVRLNSLVFIASLNSKDRTTLAQTFKNQRPDLTNLLLAFNTSDPMSYIVQKEDINGF
                     FKLYNYSKKYDLDLNTSLVNKLPNHIGFKDFAQNIIIKKENPKFRYSMLEINPENVSE
                     DSAFYLGVNALTYDKTELAYDFFKKAAQSFKSQSNKDNAIFWMWLIKNNEEDLKTLSQ
                     SSSLNIYSLYAKELTNTPFPKIESLNPSKKKNNFNMQDPFAWQKINKQIRDANASQLD
                     VLAKEFDTQETLPIYAYILERKNNFKKHYFIMPYYDNIKDYNKTRQALILAIARQESR
                     FIPTAISVSYALGMMQFMPFLANHIGEKELKIPNFDQDFMFKPEIAYYFGNYHLNYLE
                     SRLKSPLFVAYAYNGGIGFTNRMLARNDMFKTGKFEPFLSMELVPYQESRIYGKKVLA
                     NYIVYRHLLNDSIKISDIFENLIQNKANDLSKS"
     gene            complement(15823..16308)
                     /locus_tag="RJ266_000877"
     CDS             complement(15823..16308)
                     /locus_tag="RJ266_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354640.1"
                     /translation="MKIYSVILGAFLLGACSLKDQAIVDTNLKSQTLMFTQKYKITQD
                     KINAIITMSYLNPILDKTSKDDVLALSFTPNTLKIQNLEVFINNKKANIEKLDDEYLK
                     YIIQNNYTDYFKVSLPSVKEEIRLVAKICLDHLPCFELNFQKYPKSLYYRSEDVDTQY
                     N"
     gene            16404..16895
                     /gene="mobB"
                     /locus_tag="RJ266_000878"
     CDS             16404..16895
                     /gene="mobB"
                     /locus_tag="RJ266_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HDV7354641.1"
                     /translation="MKQLIIAFSGPSNSGKTTLITKIADNFLQQNLKVLIIKHDPADK
                     AQFDFNSKDSFKFFQSGAEVMVLSPTRTTFFSHENRDILKALKLSPDFDICLVEGLKT
                     LDLPRISVFCKEIDESYFIFSNAIASYEKISHPYLTWLDLNDIQAICQYILKNAKNLQ
                     GEL"
     gene            16897..17739
                     /locus_tag="RJ266_000879"
     CDS             16897..17739
                     /locus_tag="RJ266_000879"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HDV7354642.1"
                     /translation="MQEVISYIQKAVLEISNALKFPDTSYSQNQNFTGDTQLKFDILS
                     DEIITKTLSQCSSIKAIISEEKDEILTLNERANFIVAYDPLDGSSLMDVNFAIGSIFA
                     IYEEKASAKNLRAALYSMYGARLELVICKDQPKLYRLNANNEFIFIKDLKMNEKGKIN
                     ATGGTQKFWEEKHAKFIKSLFDEGYRLRYSGAMVSDINQILLKGGGIFSYPATQDAPN
                     GKLRAFFEVFPLAFIIEKAGGKTTNGKNRSLLELEFDKIHATTPCFFGSEYEISKLLK
                     AYNE"
     gene            17732..17929
                     /locus_tag="RJ266_000880"
     CDS             17732..17929
                     /locus_tag="RJ266_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354643.1"
                     /translation="MNEVRDEFEQDMDKKKEILLSCQNSKNLNSCYNCDEIFNCQTRK
                     NYVDAVYNSMSKGKTEGGFDF"
     gene            17939..19825
                     /gene="metG"
                     /locus_tag="RJ266_000881"
     CDS             17939..19825
                     /gene="metG"
                     /locus_tag="RJ266_000881"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HDV7354644.1"
                     /translation="MRYITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLT
                     GTDEHGQKIEEAAKLRNSTPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVK
                     AMFLKMWQKGDIYKDEYEGHYCISCESFFTQSQLINDCSCPDCGKQTRILKEKSYFFK
                     LSKYQDKILQWYEEKDPILPKNKKNELINFVQNGLKDLSITRTSFDWGIKLPQEINDD
                     KHIIYVWLDALFIYVSSLDFQNKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDL
                     PLPKFIGAHGWWTKEGEKMSKSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFS
                     ENMLINRINAELSNEFGNLLNRIIGMSTKYSQGNISKEGVLKFYNAELNQAKEHLNLA
                     VEFLENLQCNRYLEELFKALSVANLAISKYEPWNLIKENKHEQANALVALCANILAKT
                     SLLLSPTLPKSSQKVALALNFEISSANYTKMILDNELLDFKANPCEALFPKVEKALLK
                     QEIKEEPKKEESPKIKIDDFAKIEIKVAKVLDCQNIEGSEKLLKFQLELDDKEIRQVL
                     SGIAKYYKASDLIGKQVCVISNLKKAKIFGHESDGMILSAKSGDKLVLITPEQLVQNG
                     SLVG"
     gene            19829..>20604
                     /locus_tag="RJ266_000882"
     CDS             19829..>20604
                     /locus_tag="RJ266_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354645.1"
                     /translation="MQISNLGELLNATLIHEGSVLSVEGFAINLNELKTGFAFFNNDK
                     KEIAQAVKKGAYAIITENDITIEDKEIFYFRVENLERALVRFLRFFCEDKECEFLLFK
                     SYELSLCKAFYFNILKGNIFADFEKLIKAKKGEIFCYCEENYLNKLCTYSHSLKDANF
                     TLLSRSSFFFTTLICENLYFKNLNLPFFYANSFAKIISFLKEKSQKIIFDFNKIDDFK
                     IYFIDDKFEITPFGSSSQAFIVSNNQNTFEFWKEKFKNIK"
BASE COUNT         7755 a         3100 c         3013 g         6736 t
ORIGIN      
        1 tataaattaa tttaaaaaga tttaagatga aaatagatac tttgacaaaa aattttagca
       61 attatcaaac acaaataaac aaaaacaatg atttggcaag taatgttcat agtgacaatg
      121 tggttaaaat tcaaatttca gatgaagcaa gaagtttaag tcaagcaaat tcaaaaaatg
      181 aaaaagaata tgaaatcaaa gtaagtcaag aaaaaataga aaaccacaaa gaccaaaatt
      241 ccattcaaag tagcaaaggt ggcggaaatc ccgcattaga ggctttaata gcaaaattag
      301 ctgaaatttt agctaaaatt gcagaactta ctcaaaaaat gacaaacgct aacgaacaaa
      361 tgaaaacgac atttcaaaaa caaattgatg tgctaaaatc tcaagcagat gtaattcaag
      421 ctcaaattca agaactccaa agccaacaag cttgattata ttttttcaaa agtttaagaa
      481 tgctataatg atgcattttt aaactttttc aaggaaaaat atgacttatc tagaaatcga
      541 aggcacaaat catctaagcg gaaatgttac aataagcgga gcaaaaaatg ctgccctacc
      601 cttgatcgtt tcaagcatac ttgctaaaaa tgaagtaaaa atcaacaatg ttcctaatgt
      661 tgctgatata aaaactctta tatctttgct agaaaattta ggagctaagg tcaattttca
      721 aaacaatagt gctttattaa acacaaacac tcttaatcaa accatagcta aatatgacat
      781 tgtgcgtaaa atgcgtgctt ctatacttac tctagggcct ttgcttgctc gttttgggca
      841 ttgtgaagta tctttgcctg gtggatgtgc cataggacaa agacctattg atttacatct
      901 tttagccttg gaaaaaatgg gggcaaatat acaaattaaa caaggctatg tcgtagctag
      961 tggaaattta aaaggcaatg aaattctttt tgataaaatc acggttacag gtagtgaaaa
     1021 catcatcatg gcagcagctt tagccaaagg taaaaccaag ctcttaaatg ttgcaaaaga
     1081 acccgaagta gttcaacttt gcgaagtttt aaaagacgca ggacttgaaa tcaaaggcat
     1141 aggtacagat gaacttgaaa tttatggtag tgatggagaa cttttagaat ttaaagaatt
     1201 tagcgttata cctgatagaa ttgaggcagg aacttatctt tgtgcagggg ctattacaaa
     1261 ttctaaaatt actttagata aagttaacgc cactcatctt agtgcagttt tagcaaaact
     1321 tcatcaaatg ggttttgaaa ctttgattgc agaagatagt atcaccctac ttcctgctaa
     1381 agaaattaaa cctgtagaaa tcatgacaag tgaatatcca ggctttccaa ccgatatgca
     1441 agcgcagttt atggcactag ctttaaaagc taatggaact agtattattg atgaaagact
     1501 atttgaaaat cgtttcatgc atgtaagtga acttttaaga atgggtgcgg atattaaact
     1561 caatggtcat attgctacca tagtaggcgg aaaagaactt aacgctgctg atgtcatggc
     1621 tacagatttg cgcgcttctt cagcccttat cttagcagct cttgcagcta aaggtacaag
     1681 caaagtccat agaatttacc atcttgatag gggttatgaa aatttagaag aaaaatttaa
     1741 agatttgggt gtgaaaatca caaggcttga agaatgaaaa atatctttga aaccttaaaa
     1801 gacttagaaa atcaaatttc atgtttagat gaaagtgagc ttattagcct tgaaaaagca
     1861 aaggatagaa ttttagctaa agatttatac gctagaaaaa atctacctag ttttgacaat
     1921 gctgctcttg atggctatgc ttttaattat actgatatca atgaggcttt ggagattaaa
     1981 gggactattt ttgcaggaga taaaaatttt tatacagttg ctaagaatga atgctataaa
     2041 atcatgacag gggctaaaat gcccaaaaat gctgatacta tcttaatgtt agaagatgag
     2101 tatatagaag aaaataaact catcattaaa aaaaccccta aacaatacaa tgcctatcgc
     2161 tataaaggcg aagaattaaa aaaaggtgaa attttacttc aaaaaggcac caaacttaat
     2221 gataaacata tcgccctgct tgcttctcaa ggcctttata aaatagaagt cataagaaaa
     2281 attcgcatag gcattttttc aagcggaaat gaacttaaag aaccttggca agaatgcgat
     2341 gaagaaagta tttataatgc caatgcttta cctttgctaa ccatgtttca aaatgcttct
     2401 tatttaggta ttatcaaaga taattttaaa agcactaaag aggctttaga aaatacaaat
     2461 tttgatcttt taatcacttc aggaggtgca agcgttggcg aggctgattt tatggaaaaa
     2521 gctttagatg aattaggctt tactccactt tttaaaggtt taaaagcacg ccctgcaaga
     2581 cctactaagc tttatagaaa aggtgaaaat ttcgtattga ttttaccagg aaatcctatg
     2641 gcagcttatc tttcttgttt tatttttgct aaaaaaatca ttaatttatt aagtgaaaac
     2701 ctagacaatc ctttaacatt ttatggcaaa atgggtatgg atttaaagct taaaagcgga
     2761 agaaataatc tcatcttagg aaatttagaa aaagatattt ttacaccatt taatgaaaat
     2821 aaatttggat ctggtatgat acttccactt attaaaagtg aatttttact tataagtgaa
     2881 gaaaatataa gcgaattaaa aaaaggtgat gaaatcacgc ttttaaaaat ataatgtttg
     2941 tgtttttcac aaacattagc ttaatttatc ctcatcatca tgatcatgga tatattgttc
     3001 atcattttcc aaggtatcaa caaaacgccc tatcctttcc cagcgaacat ttttatcttt
     3061 atcccaagag aaatatacaa accaaggttt acctactatc aacctataag gaacagaacc
     3121 ccaaaaacga ctatcataag aataatcgcg attatcaccc atcatgaaat actcattttc
     3181 aggtacatca aagacataag catttccgcc gctaaaacct atatgatttc caagttcttt
     3241 aatataagtt ggagacatag caaaatcacc tatgctaaga aagcgtaaaa tatcgctttc
     3301 tatatctttt tttggatcat aatgaatacc tttttgttta taaggttctt ttacataaat
     3361 ttgccctcca agagtaacaa gatcattcgg ataatgttct ttcataaatt catcaccctc
     3421 atgcattctt acataaagtg ttttatttgc ataaactatc ctatctcctc ctgtgcctac
     3481 acaacgcttt acaaagtgtt ctttttcatt tctaggattt ctaaaaacaa ctatatctcc
     3541 tctttgtgac ccttgtgctt ttatcaaatg cccatcttta ttaaaatccg gcaaaacagg
     3601 aatttccaac caaggaatat gaggagttgg gataccatag ctaaattttt taacaaataa
     3661 aaaatcccct accaataagg tgtttttcat agaaccagaa ggaataacaa aagcttgtat
     3721 aaagaaaaaa atcaccaaaa gaacaataac tacagttcca gtccaagact gtgaaaattt
     3781 atataatttc tttaaaattt ccatagattt tccctaatta agtctatttt tagcagattt
     3841 aactgtgttt tctaaaagca tggctatagt cataggacct actccacctg gaacaggagt
     3901 tatataacta gattttttag atacctcttc aaaatctaca tctcctacta tctttccact
     3961 ttcaagacga ttgattccaa catcaataac aatcactcct ttttttacca tatccgatcg
     4021 aagtaaattc acacaacctg ctgctactat aatcaaatca gcttgcctag tataaaggct
     4081 caaatctttg gttttaatat gacaaacgct tactgtagct ccagcgttta aaagcatagt
     4141 agccatagga cgacctacta tatttgaagc acctataata acagcgtctt ttccttctaa
     4201 atcaatttca taagccttca aaagcttcat aactccaagt ggagtacaag gcaaaaaccc
     4261 actttctaag cctaaattta aatatcctac attaatagga tgaaagccat caacatcttt
     4321 actacttata atgctttcaa gtattaaatc tttacaaata tgatcaggta aaggaagttg
     4381 aaccaaaatt ccatgaacac tatcatcgtg atttaaggta ttaatcaatg ccaaaagttc
     4441 attttgtgta gtattttcat taagatgata aactaaagat ttaattccac attcttcaca
     4501 ggctttagcc ttggatttta cataagtttg acttgcagga tcatctccaa ccaagataac
     4561 agctaaacag ctttcaatcc ctttgctttt caaaaattga tttttttctt ttaattcttc
     4621 tttgattttt gcgcttaaag ctttaccatc aagcaaagtc attattttcc ttctataaat
     4681 ttaatcactt ttttaaagta aaaattgtat catattaaaa cttcattaac aaggtgaaac
     4741 tttgaaaatt gtcttaatgt tttttttatt tagtatcagt ctttttggtg ctgattttat
     4801 cactcttaaa gaatactcta aaatgcttta tgaaaatcca aggggcatca gttgtaaaga
     4861 atgtcatgga gcagatggaa gcgaacaaat tttaggatat tatatgaaaa atggtattaa
     4921 aacaacttat aaagttccaa gtatacaaaa tcttagtttt gagaatttta aaaattctct
     4981 taatcagagt aaagacgcaa aatcaatcat gccaaattac tctttaacaa atgatgaaat
     5041 tgtaacttta tataattaca tcaagcaatt tagcaaggaa gcaaaatgac aaacaaaaaa
     5101 gcttttaaag aagcgtgtaa attcatcgca ggtggtgtaa attctccagt tcgtgctttt
     5161 gcaaatgttc aaagtgagcc aaaatttatt tctcatggaa aaggtgctta tattttcgat
     5221 atagatggaa attcttatat agactatgtt caaagctggg ggcctttact ttttggacat
     5281 tgcgataaag atatacaaaa agcttgtcaa aaagcacttc ataaaggttc aagttttgga
     5341 gctccaactt tattagaaac tgaacttgcc aagcttgttt tatctgattt tcctcattta
     5401 gaaaagatcc gctttgtaag cagtggaaca gaagcaacca tgagtgctat tcgtcttgcc
     5461 cgtggtttta ctaaaaaaga taaaatttta aaatttgaag gatgttatca cgggcattct
     5521 gattcattat tagtgagtgc aggaagtggt gctgctactt ttaactctcc tagttctttg
     5581 ggtgttttag aagatgtagc taaacacact ttagtagcta aatataatga tataaatagc
     5641 gttaaagagc tttttgaaaa aaataaagat attgcatgtg ttatcattga gcctattgct
     5701 ggaaatatgg ggttagttcc agctaaacaa gattttttag aagaacttgc taagatctgt
     5761 aaaaacaatc aaactctgct gatttttgat gaagtaatga gtggatatag agcatcttac
     5821 cttggttcct atggaatcaa tcatatccaa gcagatataa ttacttttgg taaggtaata
     5881 ggaggcggtc tacctgcagc agcatttgct tctagagctg aaattatgga tattttaagt
     5941 cctttgggtg gagtttatca agcaggaact ttaagtggaa atcctttagc aatggctgca
     6001 ggtatagcaa gccttacaaa agccaaaaag aaaaccaagc tttatgacaa acttggaaaa
     6061 ttagcaaaaa aacttaccca aggaatgaaa aaattagcag atgaaaaagg acttccactg
     6121 caagtttgtc atgtaggttc tatgtttgga tactttttca ccaaagatcc tgtatcaaac
     6181 taccaagatg cattaaaatc cgatctagca ttattttcaa aatttcacaa aaatatgctt
     6241 gaaaatggaa tttatttagc accttctcaa tttgaaacaa gctttatatg ttcaaaaatg
     6301 gatgataaaa ttatagatac aacactagag gctgttaggg aaagctttaa aagaatatga
     6361 gcaatatttt aaaagaagaa aaaaatcact tagaaaattc caacagtaaa agacaaaaaa
     6421 tcattcgcaa aactcttgaa gctgcggatg gtttaagtct tggcatctct atggttgttg
     6481 ctgtatttat aggtgtggaa ataggatatt tacttaaaaa atttactcct tatccttggc
     6541 ttttttggct tggagttttt tgggggatca gtgctgctat acttaatgtt tacaaagctt
     6601 ataaagttca agtaaaaagc tatgaagaat ttaaagaaag agatgagttg atcaaagaaa
     6661 aaattcaaaa agaaaagaac aaataatgga acataaaaaa gctctatttt gtatttttgc
     6721 cattattcat ttattttttt ggatcatatt ttcatcgtta aatcatttta aattagatac
     6781 atttttaagc tatgaaatag ctttttttag tgttttattg attatttttg cttcttattt
     6841 aaattataaa aaagtcatta taaaaaaatc aaaaaattat gaaaaagatt ttaatttcat
     6901 ttcatcgctt tttatcaaaa aaaaacaaaa tttatcaaaa attattcatt ttaaagttct
     6961 aaaagacgat ttaaagccaa atgttaaaga gaaaatccat ttttttgcta tgttttttac
     7021 tctctttaaa ttgatggctt atgtaatatt ggttgctgga tttttatttt tacatcgcca
     7081 agatagatta gatatctttg cttatatttg tggaatttca tccttgctag tttgtgtgtt
     7141 tatttttatt ttatatataa aaaagtatga gtccaaaaaa aattattaaa tcaatgacag
     7201 cactttttgc tggtatggca tttttatttg caggtaatgc cttgatagta agctctatag
     7261 gtgttatatt aaaagaaaac ggagaaagtt ctttagctgt tggagtagta agttcttgtt
     7321 tttttgtagg tgctcttgtt ggaactatca gtgctcataa aattatttct cgtataggtc
     7381 atatacgctc ttttgggcta tttggtgcta tttttggaat ttcagctatg cttcatacag
     7441 taagcgaaaa tcttattttt tgggctgttt taagattttt cataggaatt tgctactatg
     7501 gacttttaat ggtcatagaa tcatggctta atgaaaaaag caaaaatgcc attcgatcta
     7561 gaattttagg tttttatgaa attgtttttt atcttgcgtt tggtattgga gttttaatca
     7621 tagcgttaaa tttaagcaaa catagtgtat ttattctcag tgcaacttta attttacttt
     7681 catctttacc tttaaatcta attaaaatca aagaacctgt tttacccgca tcaagtccta
     7741 tttctatacc taaaattttt gatatagctc ctttagctat cgtcacaagc tttatagctg
     7801 gaatgcttat aaatggcttt ttttctatgg catctttatt tatacttttg caaggttttg
     7861 atacaaaagc ggtttcttat tttatatttt gtggggtttt aggtggtttt attgcacaaa
     7921 ccatcatagg aactatttca gataaacttg gtcgcaaatt tgccattatc acttgtgcaa
     7981 gcataggatt tatcactatg cttatattta tcttttttaa acttcattta tatatgcaat
     8041 attttttagg aattactctt ggtataggaa tattttgttt atatgcttta gcacttgcta
     8101 gagcaaatga tgttttagta aacaaaaata aaggtgtaga gttaggtcgt ggggttcttt
     8161 tttgttattc tttgggctct ttgtttggcc ctttaatttt aggtttttta atgcaatatt
     8221 ttgaaatcaa gggttttata tggttttata tagtttcttt agcattttta attctttttg
     8281 ctatcaataa accaaatatt ttaaataaaa aatttaagaa aaagcctgga aatatggtgg
     8341 tatttgatga ttaatactca actagcaagt caaattgcca atacgcaaaa aaatgattta
     8401 aaagtagata actctgcttc aaaagataaa acaaatttaa aagacaatcc aaaagaagca
     8461 cttgcacaag ctttaaagca aaatttaggt ttaagcaagg acgctagtag tgaggaaata
     8521 ctagcaaaat ttgttcaaaa tgaaacaggt accaaattaa aagaacttgt taataaactt
     8581 ttagatcaaa tcaatgctca aaaaaatccc gattcccctg tacttaaaca aggaaaaaat
     8641 ttaaatttag ctcctaattt tgctaatgaa ttaaaaatct taagtacaga acttgcaaaa
     8701 agtgatactt ttacacaagt tttagacaga ttaaatcaaa ttttaaaacc tgccagtgaa
     8761 ataaaaaaca ataacttagc tcctttgttt aaaaattcag gcgtattttt agaagctaaa
     8821 ttaaaagatg ccctaaacga agaattacta cccaaaagtt ttcactctct tttaagtaca
     8881 atcaaaggtc ttagtagcga aaaactaagc gttcagatag cccagcttgc aaatacaaat
     8941 ttaagcccaa aagacacttt aaaagaatta aaaaatatta ttaattctag caaaaatgaa
     9001 aataagcaaa ttttaaatca aagttctttt aaagcacttt taaatttaag ttctaaattg
     9061 gaaaatttta aaaattatat aagtaaaaat cccagttatg ctcaagaaaa aatcacccct
     9121 atagctaata aaattttaaa agaattaaat tccatcaaaa atgatttttt caaagctctt
     9181 aataagccag aaaatttaat gataaaagat ccaaacatcc ttaagcaaac tgctaccgcc
     9241 tttgaaaaac ttgaaaatac tttaaaaaat atactaggca atcaagcttc taaaatacaa
     9301 gataaagaaa atattttaga aaatctttta agtaacaaag aaaatatgaa agaagaaaaa
     9361 cttaatcata acacaaaaaa ccaagatgaa gaaaaacata taaaagcatc aaaagaagaa
     9421 actctcacag atgatactaa aaccgatatt aagcaaaatg taaaaaacga agaaaattta
     9481 cctaaaaaag aagttaatgc aaatttagat tctagcacaa aaactcacga agaaaatatc
     9541 aaagaaaatc caaaatttta tgaaacaaaa acagaaagca aaacttcaat caatacaaat
     9601 actaacacaa acaacacgca aaatttaaat aattctcaaa atattcaatc taacaataac
     9661 caaactatgc aaaatatttt taaaaatcag gaatttataa aacaaaatat tgtaaaaaat
     9721 ttagcattta atgtagaaaa tttagatcta gaacaagtgc aagatttaag taaaaattta
     9781 agcaatcttt ctcgtagact taatgaaagc ttaaaagaac ttgaacccta tactcaaaat
     9841 gccaagctta atcaagcaga acttaaaaat ctcgaacaca aactcaatct ttctaccaaa
     9901 gatctagcgc aaattaaacc aaaaacagaa caagatatag ctgaatcttt acatcatgat
     9961 gtaaaatcaa cacttttgca aatttcaaat ttggctaaaa atgaaggcaa tgaagctgta
    10021 tataatcaag ctaatcgtct tttagcgcaa attgaaatca atcagcttat gtctttagct
    10081 aatgattcta tcaatactta tctgcctttt tcttgggatg atttaaatga ttctaaaatt
    10141 atgtttagac gcggaaaaaa ggataaattt tttgctcaga ttaaactcga atttgcaaaa
    10201 cttggggatt tggaaattct tatttcttta aataatgaaa aatatataga tattaatatt
    10261 atggcagaaa atattgaatt tagaaaaacc atctatgaaa atgcccatga gcttaaaaga
    10321 aatatcaata aagcaggact tttaagtgca aatttctttg taggtgatat cataagaagt
    10381 aaatttgata ctagaaatat gaaaaattta gatcttgaaa tgggtatgga taaaaaagta
    10441 tgagcaaaat caaaagatcg attaaaaaag ctgtagccct aggctatcaa aaagaaaaaa
    10501 actctgcacc aaaagtgctt gcaagtggca aaggcgaaag tgctgctaaa attatttctt
    10561 tagccaagga acacggagtt cccattaaag aagatgaaga tttaatagaa attttaagca
    10621 agcttgactt aggtgatgaa attccaccta atatgtataa agctgtagct gaagtttttg
    10681 cctttatcta tcaaatggca aataaaactc ctaaaaacta atccgctatt ttttctccaa
    10741 atttaatacc ctgccctgct tttaaattaa aatttaaaat ccctttttga gagattaaaa
    10801 ctatagtaga acccagttca aaatttccta gttcttcgcc tttttttaga tttaaatttt
    10861 catattttct agtaaaatta tgagaaattt tagtattggt ttgtatgctt atatcaaaat
    10921 taaaacgcat ttttcctaca ttttgcgctc ctacaaaaac aagccaaaaa ataccttttt
    10981 cattttgaca ttttaaactc actctttcat tttttacata caaattacta atgcgttcta
    11041 aatgcttttc atttacacta taaagggcac cacttgtgta agttgcactt aaaatttgca
    11101 tatcacaagg gctgtgataa cgatgataat cttttggaga aagatagata ttgacataat
    11161 caagcccatt tttaagctca tctttttcaa agctatcttt taaaagctcc tcaatgctat
    11221 aagtatgtcc ttttatagaa aaagcaaaat gttcttcatt tgccaaaaaa gtacttccac
    11281 actctaaaat tttaccatca cttggactga taaaaccttc ttcaagcttt cttggaattt
    11341 gcaaagttct tataaaaaga gcatttaaac tctcgtattc acaagggctt ttaaattcac
    11401 tcatatcgat attaaaatgc ttaacataat tttcattaat aactttttgt atcattttag
    11461 gaaatttaat ccccgctaca aaaccaaaaa gtctcgaact ttcttttgaa aaactcattt
    11521 ttttcctttt aaatttaaaa tcactatttc actcggagca aaaactctaa gacttggccc
    11581 ccaaaatcct gcgccactac tcacataaag cttagttttt tctcctaaat cataaagccc
    11641 atgaacaaaa ccttgctgaa gtttaactaa aaacataaaa gggaaaattt gccctccatg
    11701 cgtatgccca cttaaaacaa ggtcaaaatc acttaaatca taaagcaaag ctgttttagg
    11761 ttgatgtgtg agtaaaatac tagctttact tgtatttaaa tccactttta ttcttgctaa
    11821 atcaggagca tataaacccc tatcaagtcc ggctaaatct ccaagtccag caatatttat
    11881 aaaacccaaa tctaaatttt gattgactaa aattttcata ttagtatgtt ttctaagtaa
    11941 atccaaaact tcattgatac catgataata ctcatgattt cccaaagcat aaaaagttcc
    12001 ataagtggaa ttaaaatcat taagttttga gatgtaattt tttaaatctt taggattagt
    12061 atcaatcaga tctcctacta ttacaaccat atcaggactt tgcaaattca ctttagtgat
    12121 gagcttatct aaaaaatttt catgcaaatt tttacccaaa tgtatatcag taagcatgac
    12181 aatttttaaa tcttgtttaa gatttggtat ttcaacatca acactcttta cttcaggtgt
    12241 ttttagagca ttatttatac ttatataaat taaaaacaca cttaaaacta taagagaaaa
    12301 ctcaaaaatc aaacgcaaaa taagattata ttttttatct cttttaccca taagagctaa
    12361 aatcaattta acaaaatccc aagctaaagt cataaaaaac aaacaataag tcggcgcata
    12421 aagcatggct aaaatttcat accaagtatc acttaaatat tcatctctac gaaatattaa
    12481 aaacacagct tgggctaaaa aaagcacaat aaaaataaag gcaaaaattt tataaaaata
    12541 cttaaaaaga gtaattttct tgattaatct tttataaata taaacatttg ctaagccaaa
    12601 aatcaataat acaatgaaag aaaaaattaa aaatatcata aaagtattat aaccaagtaa
    12661 aattaaatat ccgtataaat ttttctgtta taataagctt ttaaataatt ttaaaggcta
    12721 taaaatgtac cgttttgcac cttctcccac aggtgatatg cacataggaa atttacgcgc
    12781 agcaattttt aattatatct gtgcaagaca aaaaaatatg gattttatct tacgtattga
    12841 agataccgat aaggctagaa atatagcagg aaaagaagaa gaaatcaaag aaattttaaa
    12901 tctttttggt atttcatggc agcattacta tatacaaagt gaaaatttaa aattccatcg
    12961 ccaaatggct ttaaaacttg taagtgaaaa gaaagctttt gcttgttttt gcaccgaaga
    13021 agaacttgaa gcaaaaaaag aactagctaa aaaacaaggt aaagcttatc gctacgatgg
    13081 cacttgtgaa aaactagccg atattgatgt tttagaatgc gaaaaaccct ttgttatccg
    13141 tcttaaaaaa cctactcata ctatgaaatt tactgatttt atcaaaggtg aattaagctt
    13201 tgagcctgaa aatatagact cttttgtcat catgagaaca gataaaactc caacttataa
    13261 ttttgcttgt gcggttgatg atatgcttga aaatgtcact tgtattatac gcggagaaga
    13321 tcatgtttca aacactccaa aacaagaaca tatccgcgca agcttaggtt ataataaagc
    13381 tatgacttat gcacacttgc ctatcatttt aaacgaagaa ggtattaaaa tgagtaaaag
    13441 agaagcacat tcttctgtaa aatggctact tgaaagtgga attttaccta gcgcaatcgc
    13501 aaattatctg atcatgctag gcaataaaac tccttgtgaa atttttacct tagaagaagc
    13561 tataaaatgg tttgatatta ctaaagtttc aaaagctccc gcaagatttg atcttaaaaa
    13621 actcttacaa atcaatcgtg aacatatcaa aatgatcaaa gatgatgagc ttaataaaat
    13681 tttagattta aacaaaaatc ttgcacaact tgctaaattt tacactcaag aagcaagcac
    13741 cataaaagaa cttaaagaaa aaatgcaagc tatttttagc acaaaagact ttggagagtt
    13801 tgaaacagaa tgtaaaattt taaaagaact cttaaaagat attgaacttt ttgaaaacta
    13861 tgaagatttt aaaaatgaac ttttaagtaa aagcgactta aaaggtaaaa aatttttcat
    13921 gcctttaagg ataattttaa caggaaatat ccacggacct gagcttagtg atctttatct
    13981 ttatattaaa aattttattc acgaattagc aaggatttaa ctatggttat agactctttt
    14041 attatttcta tttttcaagt actacaaatt gtcattaaca tttatacttg gattattatc
    14101 atcacagcac ttttaagctg ggtaaaccct gatccttata atcctatagt gcaaatttta
    14161 tataaattaa gttatcctgc ttacgcctta gttagaaaaa ttccaacacg cattggcaat
    14221 attgatcttg cacctttgat tatagtctta gcattgcagt ttcttggcat ttttcttggg
    14281 aatatcttaa ggagtatatt gtgataaaaa aaatactcgt ttttttattt attttttcaa
    14341 gtttaaatgc tacacaatat agtatagaaa aactcaaaaa ggaagaaaat tcacttgcta
    14401 aggattatta tatttatagg cttttagaaa aaaataaaat cagtaaaaaa gatgcacagg
    14461 atttaaattc tcatattttt cgctatatag gaaaaattaa atctgaactt gaaaaaatca
    14521 tccctttaaa gccttatatc aacccaaaat atgctaaatg ctatacctat acagcaaata
    14581 ctatcttaga tgcaaattta acttgtcaaa gtgtgcgctt aaattcatta gtttttatag
    14641 cgagtctaaa ttccaaagac cgaactactt tagctcaaac ctttaaaaat caaagacctg
    14701 atttgacaaa tttattgcta gcttttaata cttctgatcc tatgagctat atagtacaaa
    14761 aagaagatat taatggtttt tttaaacttt ataattattc taaaaaatac gacttagatt
    14821 taaatacaag tttagtcaat aaactaccaa accacattgg ttttaaagat tttgcacaaa
    14881 atattattat taaaaaagaa aatccaaaat ttagatattc tatgctagaa ataaatcctg
    14941 aaaatgtaag tgaagattct gctttctatt taggagtcaa tgccttaact tatgataaaa
    15001 cagagcttgc ttatgacttt tttaaaaagg cagctcaaag ttttaaatcg caaagcaata
    15061 aagacaatgc tatattttgg atgtggttga ttaaaaacaa tgaagaagat ttaaaaactt
    15121 tatcacaaag ttcttcttta aatatttata gtctttacgc aaaagaactt actaacacac
    15181 cttttccaaa gatagaaagc cttaatccaa gcaagaaaaa aaataatttt aatatgcaag
    15241 atccttttgc ttggcaaaaa ataaacaaac aaattcgcga tgctaacgca agtcaactag
    15301 atgtcttggc aaaagaattt gacacacaag aaaccttgcc tatttatgct tacatattag
    15361 aacgcaaaaa taattttaaa aaacattatt ttataatgcc ttattatgat aatataaaag
    15421 actataacaa aacaagacaa gctttaattt tggctattgc cagacaagaa agtcgtttta
    15481 ttccaactgc tatttcagtt tcttatgctt taggcatgat gcaatttatg ccatttttgg
    15541 ctaatcacat aggggaaaaa gaattaaaaa ttccaaattt cgatcaagat tttatgttta
    15601 aacctgaaat agcatattac tttggaaact atcatctaaa ttaccttgaa tcacgtttaa
    15661 aatctccact ttttgtcgct tatgcttata atggcggtat aggatttact aaccgtatgc
    15721 ttgcaagaaa tgatatgttt aagacaggca aatttgaacc tttcttgtct atggaactag
    15781 ttccttatca agaaagccga atttacggaa aaaaagttct agctaattat attgtgtatc
    15841 gacatcttct gaacgatagt ataaagattt cggatatttt tgaaaattta attcaaaaca
    15901 aggcaaatga tctaagcaaa tcttagctac aagcctaatc tcttccttga cactaggaag
    15961 agatacttta aaataatcag tatagttgtt ttgtattata tattttaaat actcatcatc
    16021 caatttttca atattggctt ttttattatt gataaaaact tctaaatttt gaatttttaa
    16081 tgtatttgga gtaaaagata aagctaatac atcatcttta cttgtcttgt ctagaattgg
    16141 gtttaaataa gacatagtta taatggcatt aatcttatct tgtgtgattt tgtatttttg
    16201 agtaaacatt aaagtttgag attttaaatt tgtatccaca atcgcctgat cttttaaaga
    16261 acaagctcca agcaaaaaag cacctaaaat tacactataa attttcattc tttttccata
    16321 ttttttagta ttattgtagc cttttaaccc tattttttgg tttaaaaaga tataattttg
    16381 caaaaaaatt aagagtatat tttatgaaac aacttattat agcttttagc gggccatcaa
    16441 attcaggaaa aactacactc atcactaaaa tagctgataa ttttttgcaa caaaatttaa
    16501 aagttttaat cattaaacat gaccctgccg ataaagctca atttgatttt aacagtaaag
    16561 atagttttaa attttttcaa agtggagctg aagtcatggt tttaagccct acaagaacaa
    16621 cttttttttc tcatgaaaat agagatattt taaaagcttt aaaattaagc cctgattttg
    16681 acatttgttt ggttgaagga ttaaaaactc ttgatttacc acgcattagc gtattttgca
    16741 aagaaattga tgaaagttat tttatttttt caaacgccat tgcaagctat gaaaaaattt
    16801 ctcaccctta tcttacttgg cttgatttaa acgatataca agctatttgc caatacatac
    16861 ttaaaaatgc taaaaattta caaggagaat tataaaatgc aagaagtgat ttcttatata
    16921 caaaaagcgg ttttagaaat ttctaacgct ttaaaatttc ccgatacaag ctacagtcaa
    16981 aatcaaaatt ttacaggcga tacccaactc aaatttgata ttttaagtga tgaaatcatc
    17041 acaaaaaccc taagtcaatg ttcaagtatt aaagccatca tcagtgaaga aaaagatgaa
    17101 attttaacgc ttaacgagag ggcaaatttt atcgtagctt atgatccttt agacggttct
    17161 agcttaatgg atgttaattt tgccataggt tctatttttg ctatctatga agaaaaagca
    17221 agtgctaaaa atttaagagc tgcgctttat agtatgtatg gagcgcgatt agaacttgtg
    17281 atttgcaaag atcagccaaa actttatcgc ttaaatgcaa ataatgaatt tatttttata
    17341 aaagatctta aaatgaatga aaaaggcaag attaatgcta caggcggaac gcaaaaattt
    17401 tgggaagaaa aacacgctaa atttatcaaa agtctttttg atgaaggcta tcgcttaaga
    17461 tattctggag ccatggtaag cgatatcaat caaattttat taaaaggggg tggcattttt
    17521 agctatcctg caacacaaga tgcgcctaat ggcaaacttc gtgccttttt tgaagtcttt
    17581 cctctagcct ttatcataga aaaagcaggc ggaaaaacta caaatggaaa aaaccgctct
    17641 ttacttgaac ttgaatttga taaaatccat gcgacaactc cttgtttttt tggctcagaa
    17701 tatgaaattt caaaactttt aaaggcttac aatgaatgaa gttagagatg aatttgagca
    17761 agatatggat aaaaaaaaag aaattttact ttcatgtcaa aactcaaaaa acctaaactc
    17821 ttgttataat tgcgatgaaa tttttaactg ccaaactaga aaaaattatg ttgatgcagt
    17881 ctataacagt atgtctaagg gtaaaaccga aggcggattt gacttttaaa ggaaaaaaat
    17941 gcgttatatt acaacaccaa tttattatgt aaatgatgta cctcatttag gtcatgctta
    18001 tactaccatc atagccgata ctttagcaag attttatcgt ttgcaaggac atgaaacaag
    18061 atttctaaca ggaacagatg agcatggaca aaaaatcgaa gaagctgcca aactaagaaa
    18121 ttccactcct caagaatacg ctgataaaat cagttttgaa tttaaaaaat tatgggatga
    18181 atttgaaatc acctatgata tttacgcaag aacaactgat acaaggcata ttgaatttgt
    18241 taaagctatg tttttaaaaa tgtggcaaaa aggtgatatt tataaagatg aatacgaagg
    18301 acactattgt atttcttgtg aaagcttttt tactcaaagt cagcttatta acgattgttc
    18361 ttgcccagat tgtggcaaac aaactagaat tttaaaagaa aaaagctatt ttttcaaact
    18421 ttcaaaatat caagataaaa ttttacaatg gtatgaagaa aaagatccca tcttgccaaa
    18481 aaacaaaaaa aacgaactta taaattttgt ccaaaacggc cttaaagatc tttccattac
    18541 aagaacaagt tttgattggg ggattaaact gcctcaagaa attaatgatg ataaacatat
    18601 tatttatgta tggcttgatg cactttttat ctatgtaagc tcacttgact ttcaaaacaa
    18661 gggagaaaat gctaaatttt ggcctgcgca tgtgcattta gtaggaaaag atatcttgcg
    18721 ttttcatgcc atttattggc cagctttttt aatgagcgtg gatttgcctt tgccaaaatt
    18781 tataggtgca catggctggt ggactaaaga aggtgaaaaa atgagcaaat ctaaaggcaa
    18841 tgttgtaaaa cctaaagaag tagttgatgc ctatggaagt gaagctttta gatatttctt
    18901 gcttagagaa gtgccttttg gtaacgatgg ggattttagc gaaaatatgc tgataaatcg
    18961 tatcaatgca gagcttagca atgaatttgg aaatttactt aatcgcatta taggtatgag
    19021 tacaaaatat tctcaaggaa atatttcaaa agaaggtgtt ttaaaatttt acaatgccga
    19081 actaaatcaa gcaaaagaac acttaaattt agcggtagaa tttttagaaa acttacagtg
    19141 taatcgttat ttagaagaac tttttaaagc cttaagtgtg gcaaatttag ccattagtaa
    19201 atacgaacct tggaatttaa tcaaagaaaa caaacacgaa caagctaatg ctttagtagc
    19261 actttgtgca aatattttag ccaaaacaag ccttttatta agccctactc taccaaagtc
    19321 ctctcaaaag gtggccttag ctttaaattt tgaaatttcg tctgcaaatt acacaaaaat
    19381 gatacttgat aatgaacttt tagattttaa agcaaatcct tgcgaagctt tatttccaaa
    19441 agtagaaaaa gctcttttaa aacaagaaat taaagaagaa cctaaaaaag aagaaagtcc
    19501 taaaataaaa atcgatgatt ttgcaaaaat tgaaatcaaa gtcgctaagg tgcttgattg
    19561 tcaaaatata gaagggagtg aaaaactttt aaaatttcaa ctcgaacttg acgataaaga
    19621 aatccgtcaa gtactctcag gcatagcaaa atactataag gccagtgatt taatcggtaa
    19681 acaagtttgc gttataagca atcttaaaaa agctaaaatt tttggacatg aaagcgatgg
    19741 tatgatactt tctgcaaaaa gcggagataa acttgtttta atcacccctg aacaacttgt
    19801 acaaaacggt tctttagtag gctaaaatat gcaaattagc aatttaggcg aacttttaaa
    19861 cgcaacacta attcatgaag gtagtgtttt aagcgtggaa ggttttgcca taaatttaaa
    19921 cgaacttaaa acaggctttg ccttctttaa taacgataaa aaagaaattg cccaagctgt
    19981 aaaaaaaggc gcttatgcta taattacaga aaatgacatt actattgaag ataaagaaat
    20041 tttttacttt agagtagaaa atctagaacg agctcttgta agatttttac gctttttttg
    20101 cgaagataaa gaatgtgaat ttttactttt taaatcttac gaactaagtc tttgcaaggc
    20161 tttttatttt aacattttaa aaggaaatat ttttgctgat tttgaaaaac taatcaaagc
    20221 aaaaaagggt gaaatttttt gctactgtga agaaaattac ttaaataaac tttgcaccta
    20281 ttctcatagt ctaaaagatg ctaattttac cttattatcg cgatctagct tcttttttac
    20341 aactttgatt tgtgaaaatt tatattttaa aaatcttaat ttgccttttt tttacgcaaa
    20401 tagttttgca aaaattattt cttttttaaa agaaaaaagt caaaaaataa tatttgactt
    20461 taataagatt gatgatttta aaatttattt tattgatgat aaatttgaaa tcactccttt
    20521 tggttcaagc tctcaagcgt ttattgtaag caacaaccaa aatacctttg aattctggaa
    20581 agaaaaattt aaaaacataa aaga
//
LOCUS       DAPIWB010000030        20557 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.031, whole genome shotgun sequence.
ACCESSION   DAPIWB010000030 DAPIWB010000000
VERSION     DAPIWB010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20557
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.031"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            50..1069
                     /locus_tag="RJ266_000883"
     CDS             50..1069
                     /locus_tag="RJ266_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354646.1"
                     /translation="MNLKIFSIIVGILIAVIVILGGTYYYLFEYSKPKNYTLNTNTYT
                     EQKSYTNNYDNSYSPSIQTNNNSSDININNNTIQKQETNLLDENQSLNNDTFNTSISE
                     NNQSLNNDTNASNNINTNENKQILDTDKEKLKQENKQAKIEALKKEISKQQKILERER
                     AVKKELQSNKSNKNKYLNTAREYLSIGKNSRLEPELSTENMKVYILDGKFLSQYRINL
                     LKDMLSVIQDNAKDYYLSIFVKMLPKGEMKLTIYNKEIIFSDMKKAYKYISLDRLSPY
                     LNNPKELNEHIAREEILERLKLQIKKDGKGSDFSKHIKSLKTGLNTAQYFFPFCEIIE
                     ISSIK"
     gene            1092..3704
                     /locus_tag="RJ266_000884"
     CDS             1092..3704
                     /locus_tag="RJ266_000884"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HDV7354647.1"
                     /translation="MYDKNLEKEYYQICEERGYFEIDGNKTIQEKDKNFCIMMPPPNV
                     TGVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNVVEKQLLAQGIKKE
                     ELGREEFIEKVWEWKEQSGGKILDQMRTLGITPAWSRLRFTMDEGLVNAVKKAFVELY
                     DKRLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKYFLKDSDEFLVVATTRPET
                     FFGDTAVMVHPDDERYAKFVDKEVILPISKKAIKIIADEHVEKEFGTGVVKVTPAHDM
                     NDYEVGLRHNLDFISVFDEKGILNEHCLEFQGLERLEAREKIVAKLESLGFIEKIEEY
                     NNQIGYCYRCNNIVEPYISKQWFVKKEIAQESIEKVALGESKFYPNHWINSFNAWMKD
                     LRDWCISRQLWWGHQIPVYYCECSHEWASQHTPKTCPKCQSQNFKQDEDVLDTWFSSG
                     LWAMSTLGWGNENWGKDKIWSEKDLKDFYPNSLLITGFDILFFWVARMMFQSTNVLHQ
                     LPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQGRDIKL
                     SNDKLLQVRNFTNKIYNATNYLLLNESKFEDLENITLHSELAKYIYAKFQTCVKDVRE
                     NLDNYRFNDAANTLYKFFWDDFCDWGIELSKAEKSSVKELGSIFKEALKLLNPFMPFI
                     SEYLYHKLSDTELKTSPSIMISKYPKFKEQDKNIEKIFSLLIESIVSIRRAKSLIDLG
                     NSKIEKAYIKFNDKKIKDEIKAYMNFIIMLAKCEQIEFSEEKLPKAICDVSENLEIFI
                     TLENVDLSGILTRLENQKNKLEKESFKLNSMLSNEKFIANAPKEVVEQNKEALENLKI
                     QLEKISVELQNLRG"
     gene            3709..4719
                     /locus_tag="RJ266_000885"
     CDS             3709..4719
                     /locus_tag="RJ266_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HDV7354648.1"
                     /translation="MIKIKNLKKYYGKELVINDVSLEIKKGEIYAIVGHSGAGKSTLL
                     RCINGLENYQEGSLKVFDQEIKDLSQKKSKELRMLRKDIGMIFQNFALMERKNVFENV
                     AMPLRTHYTQCKFHAKLFNKEYMSEKEIAQKVNSLLEIVGLDHKNKSYPRELSGGQKQ
                     RVAIARALALNPKILLSDEATSALDPNTTKNILELISKINAEFGITVVLVTHEMDVVK
                     DIAQKALLLEHGQIIGSGAIDELFLRPNAKMKEFLGESDFLPEHGLNIKLYFPKEVAQ
                     NSVITHMARTLNIDFNIVWGKIEKLNGKALGNLVININEKDKDKVLDYIEKSGVLWEV
                     AS"
     gene            4716..5627
                     /locus_tag="RJ266_000886"
     CDS             4716..5627
                     /locus_tag="RJ266_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7354649.1"
                     /translation="MNEENISIVSAFFSRISQFFNEFSWQDIKEVSLSSITSFNENYE
                     NILKPALNETIYMSLMAVLFGFLLAIIPGILLAIWDKNGIKENKIAYSILDFITNILR
                     AFPFLILIVVLLPLSKIIVGTSIGTNAAIVPLAIGIAPYLAKMLESAFKEIDKGIIEA
                     AKSYGASNIQIIFKVIFSEALPAIISGITLTLIFTIGFSALAGTVGGGGLGDVAIRYG
                     YERFNKEVMIQTVVILLILVQLVQILGNLFYTWAKNSKTTYIIATLLILLGVSIVINI
                     NNDENFFWQVIVFILFLGSLLYKGFKK"
     gene            5817..6590
                     /locus_tag="RJ266_000887"
     CDS             5817..6590
                     /locus_tag="RJ266_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDV7354650.1"
                     /translation="MKIKSLFIASILTLSLNANALETITVAATPVPHAEILEQVKPDL
                     EKQGYKLEIKEFTDYVLPNLAVDNGEADANFFQHTPYLEEFNKNKGTKLIKVAAIHIE
                     PMAVYSKKYKSLDDIKEGVKIAIPNDPTNESRALDIIAKKGLVKFKDKALKTPLDIID
                     NPKKIKFVELKPAQLPRALNDVDFAVINSNYALSANLNPAKDSVFIEDKESPYANILV
                     VRVGHENDPKIKALIQALQSDKIKQFIIEKYNGSVLPAF"
     gene            6639..7409
                     /locus_tag="RJ266_000888"
     CDS             6639..7409
                     /locus_tag="RJ266_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDV7354651.1"
                     /translation="MNLFKIIILACILNLSSLFAQNITIGATPNPFGSLLELMKDDFK
                     NKGYELKIVEFSDYILPNRALEEKELDANLYQHKPFLEEYNLKKGSNLIATTPVLIAP
                     VGVYSKKIKNLENLKEGARVAIPNDATNESRALELLEKAKLIELNKNTLKTPLDINKN
                     PKKLKFIELKAAQLPRALDDVDIAIINSNFALGAGLNPSKDTIFREDKNSPYVNYVVV
                     RSEGKNSEKTKVIDEILRSDKFKAIINEHYKDILIPAF"
     gene            7419..8195
                     /locus_tag="RJ266_000889"
     CDS             7419..8195
                     /locus_tag="RJ266_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDV7354652.1"
                     /translation="MNIKKIFLSVLFTISLSFGADKTIIIGATPTPYAEILNFSKPLF
                     QEKGWKLIVKEFNDYNIPNIALNEKDLDANLYQHKPFLDDFNTHKGTKLSSLGAIVLV
                     PMAIYSNSIKDIKDIPNGAKIAIPNDATNESRALDLLAKANLIEFKSQSTLKTPIDIS
                     KNPKKLKFIELKAAQLPRALNDTDLAVITTNYALGAGLNPLKDGIFMEDKDSLYAIVL
                     ATRKGEETSQKSLVIKEILTSDKIKNFIIEKYKGSVIPTF"
     gene            8279..8941
                     /gene="flgA"
                     /locus_tag="RJ266_000890"
     CDS             8279..8941
                     /gene="flgA"
                     /locus_tag="RJ266_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation protein
                     FlgA"
                     /protein_id="HDV7354653.1"
                     /translation="MKIIFLTFFIVINYIQAASLEEIKTALAKEFRNNFPKIIISQID
                     LKITSLPKDFDQYEFLRIANGRFNQAQGFLRAEFKTPQNIQKNVFFRYFIQANLEILK
                     SERAIKRGDKLGAFDYKSVLIDFDKVPLNALTLDDVDNLVAKSNINKNAILRANMFKT
                     TALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKEGKVMQGIVVGKNRMI
                     IQ"
     gene            8938..9501
                     /locus_tag="RJ266_000891"
     CDS             8938..9501
                     /locus_tag="RJ266_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HDV7354654.1"
                     /translation="MKVLLGISGSSSVNLGLKLLKNLENQCELYCILTQGAKLSFKAE
                     NQANLEEICQENFKYTYFLDDKNLSLSVASGSFGIEKTIIAPCSISSLAKIHAGFADT
                     LLMRAAAVALKERKKLILGVREMPFSTLNLEHMLKLSQIGVIIAPPIIASYSKANNLE
                     QMENFIVGKWLDLLEIKHNLYEKWQNF"
     gene            9541..10017
                     /gene="coaD"
                     /locus_tag="RJ266_000892"
     CDS             9541..10017
                     /gene="coaD"
                     /locus_tag="RJ266_000892"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HDV7354655.1"
                     /translation="MTCLYPGTFDPITNGHLDVIKRALKIFDEVIVAIAKSEHKKPCY
                     DLEKRKELALLATQNLKNVKIIAFDNLLVDLAKELKVNTIIRGLRAVSDFEYELQIGY
                     ANHALWEDMETIYLMPSLKHAFISSSIVRSIVAHGGDVSSLVPKEILPFLKDQSCM"
     gene            10008..10586
                     /locus_tag="RJ266_000893"
     CDS             10008..10586
                     /locus_tag="RJ266_000893"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HDV7354656.1"
                     /translation="MYVVFEGIDCVGKSTQISLLKEIYKDAIFTLEPGGTELGKHLRE
                     ILLNKTHPINKRAELLLFLADRAQHFEEILKINQNKLIISDRSFISGMAYAKDFENDL
                     LFALNSFALENFFPQKIIFLKGDANLIQERLSQKELDSIEKRGIEYFLSVQDKLEKVL
                     HFLKEKISIEILTLDAKESKEKLHQQIKEFLQ"
     gene            10583..11809
                     /locus_tag="RJ266_000894"
     CDS             10583..11809
                     /locus_tag="RJ266_000894"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HDV7354657.1"
                     /translation="MINALKGMKDLLDKDAYCYEKVIKTCEEVAKNYGFTFINTPHLE
                     LCTLFKRSVGESSDIVGKEMYEFIDKGENHVCMRPEGTAGVVRAYIEKKLDKNTSVKR
                     WFYHGSMFRYERPQKGRLREFHQFGVESFGNASVYEDASIILMLVEIFSRLDIKFKLL
                     INSLGCLKCMPKYRENLIHFLDSKEGFCEDCLRRKNLNPIRVLDCKNEHCQSLLNDAP
                     LLNQNLCSSCQKDFEILQSVLKENGVDFEVDSKLVRGLDYYSKTAFEFISDEIGAKAA
                     IAGGGRYDRLIEYLDGKSGFGVGFAMGIERIIAILEQKEEKVQREGIYLCAMDEIYIQ
                     KLLHIATNLRKEHKVLLSYEARKLAKHLENADKNNAEIFLCMGENEAQNESLFYKNLA
                     KKEEKMIKISDLKKVL"
     gene            11806..13641
                     /gene="speA"
                     /locus_tag="RJ266_000895"
     CDS             11806..13641
                     /gene="speA"
                     /locus_tag="RJ266_000895"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HDV7354658.1"
                     /translation="MMDYGIDIWGNENFIIKNGKVCINHEKKPAIIDIVKELRDDGYK
                     GPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGK
                     DYNYGLEAGSKAELLLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGL
                     NELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLL
                     KENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLA
                     VEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIA
                     PVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLF
                     DLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSI
                     PDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDQPLFLHDVDVEKEN
                     YFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDALEDLDYD
                     IHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV"
     gene            13642..14280
                     /gene="cysE"
                     /locus_tag="RJ266_000896"
     CDS             13642..14280
                     /gene="cysE"
                     /locus_tag="RJ266_000896"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HDV7354659.1"
                     /translation="MNFWGIIKEDFSQPKVQDPAFNSCIELFFNYPGVWAVVNYRFAH
                     FFYIRNFKRIARMISGISQFLTGVDLHPGAELGRRIFIDHANGVVIGQTAIIEDDVLI
                     YQGVTLGGTSLEKGTKRHPTIKKGVIIGSGAKVLGNITIGENAKIGSNAVVVKDIGAN
                     LTAVGIPAYIIEERKNKNIRAIDANCDDKLEKLEKKILELENLILKQHESQK"
     gene            14453..15622
                     /locus_tag="RJ266_000897"
     CDS             14453..15622
                     /locus_tag="RJ266_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HDV7354660.1"
                     /translation="MLTKRSQVLEESITLAITALANELKAKGEDIISFSAGEPDFDTP
                     QTIKNAAISAIEKGCGKYTAIAGIPEVLKAIQTKFKKDNNLDYETNEIISNVGAKHSL
                     FECIECLVEKDDEVIIPSPYWVSYPEMVKFAGGKPVFIEGLEENGFKITAEQLKKAIT
                     AKTKVLMLNSPSNPVGSIYSKEELTQIAKVLEGTQITVLSDEMYEKLRYDGFDFVAFA
                     SVSKDALKRTVTINGLSKCGAMPGWRFGYMASKNKALISAVKRLQGQSTSNICSITQH
                     AAIPALNGECDKDIEKMRQAFEKRRNLALDILKQIPNISVYKPEGAFYLFVNIQKIEK
                     DSMKFCQKLLEQEKVAVVPGIGFGMDGYFRLSYATSDELIKKGLERIANFIKNYK"
     gene            complement(15683..16024)
                     /locus_tag="RJ266_000898"
     CDS             complement(15683..16024)
                     /locus_tag="RJ266_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HDV7354661.1"
                     /translation="MKIIQWNGAEFSPKEVKINVLIDNEKGKEIQILLAKDSVMKEHK
                     APFAIHVQVLSGKIWFEVEKEKFELNVLDMISLEANVAHSLGGLENSIIRLSLNKSDS
                     IQRVNAVLKKP"
     gene            complement(16094..17125)
                     /locus_tag="RJ266_000899"
     CDS             complement(16094..17125)
                     /locus_tag="RJ266_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDV7354662.1"
                     /translation="MFVSVDFFKTFDISNNERLKAKKVQGKKYEIFLNENEHSLITPK
                     VSFKEILRYYYLYPKNAIPSFKLPFFKPDLSGFSTPHITWLGHSSLFISFKEYKILID
                     PIFNTHASPISFINKAFKNVPIYNVNDFNEIFAVIITHSHFDHLDAKSVKALKDKAKF
                     FITPLKVGNYLKSYGVSEKKIIELDWWSGIEFGDLKIIATPAQHSSSRGDGKNKTLWA
                     SFVMEFLSVDKRVFFSADGGYFTHFKKIGEYFGSFDLACLESGQFNIAWPYSHSFPEQ
                     ILKEAKDLNAKAVMPIHWGRFLAGTHAWNEVVKFLYENLDLPLITPKMGEAYEVGAKF
                     KQDFWWKEE"
     gene            complement(17152..20067)
                     /locus_tag="RJ266_000900"
     CDS             complement(17152..20067)
                     /locus_tag="RJ266_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002928252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HDV7354663.1"
                     /translation="MTNYQEKDLENFIESYLLENHAYIKRTNENYDKNLCLDVELFEN
                     FLQATQSVALEELKKRCGQNYKKELFDRIFSQIKTKGIVKALQGYVEIKGIKIYLAFA
                     KPNTNANEESVKKYEQNSLSIIRQLHYSTQNKNSLDIAIFLNGLPLITIELKNHFTGQ
                     NVFHAIKQYKKDRNPKEAIFNYTIVHFALDHDLCYMSTKLDQDATTFLPFNLGLNNGS
                     GKIGLANGAGNPPSDGIKTAYLWEKIFKKDTLLNLFFNFVQVVKKKNEEIIIFPRYHQ
                     FDVVEKLLAHAKENGTGQRYLIQHSAGSGKSNSISWLAHNLVSLHRLEKNIFDSIIVV
                     TDRKVLDSQIRENVKSFSQTKNLVEAITHGSKQLKNALEEGKKIIITTIQKFPFILDE
                     IKTLKSKTFAIIIDEAHSSQSGSNAQKMAEAIRDKSGDESQNLEDEILEIIKSKKLQP
                     NASYFAFTATPKPKTLEMFGMPCEVDEGQKFIPFHLYSMKQAIEEGFILDVLKGYTTY
                     KSYYKIISCTNDNPKYDKKRASTKLKAYVQNNIRTIEQKSQIMCEHFFQNSFKKIKGK
                     AKAMIVTSSRENAVKYYLVFREYLRKNYPHFKAIVAFSGEVNLNGEIYSENGLNGFAE
                     NVLKDEFKKDGYRFLIVAEKYQTGFDEPLLHTMYVDKVLSGVSAVQTLSRLNRTCKNK
                     ENTFVLDFVNTHEDIAKSFSVFYEQTYLSEATDDNRIFDLKANLNEYEIYTQEEIDDF
                     TNAILRKEKENIIHAKLDIMLARFNQKSDDEKLDFYNKAKTYLKEYSFLAQILPYEDI
                     ELEKLYILLKKLASKIILPKSEDLAKGILDNVDFDSYRLQLDKTQDIVLQGNGELKPS
                     FADGSSKSVEAELEELSNIIKDFNNKYANIDFNESDKIAKILYDIKDDIAKNERIRET
                     FSKSDIQNSRIEFDALLKDKIQDILELNLELFKQFNQNIEFKDKIANTMFNMVCNDF"
     gene            complement(20070..>20557)
                     /locus_tag="RJ266_000901"
     CDS             complement(20070..>20557)
                     /locus_tag="RJ266_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002882532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354664.1"
                     /translation="KVENYEKIKKIGYQFNNSNELIIEREQFKSFIIEENKDIETIEE
                     AEIEIISPVLKEGKYKWRGIYNGEKIDFSMGDSGFKNAVIRQEYNFINGTTINCQLEI
                     SKTFDDYGEEIKTSYRVKKVYSIQANDISKITKFGQKRRKQKEESLEPTLFDFTKDTK
                     D"
BASE COUNT         7521 a         3055 c         3234 g         6747 t
ORIGIN      
        1 atagtacaat gctaaaatta tttaactttc tgtttttaag ggatagcaaa tgaatttgaa
       61 aattttttct attattgttg gcatattaat tgctgttatt gtaatattag gtggaacata
      121 ttattatctt tttgaatatt caaaaccaaa gaattacacc ttaaatacca acacttacac
      181 cgaacaaaaa tcgtatacca ataactacga taattcctat tcaccctcga tccaaaccaa
      241 caataattca tcagatataa atattaataa caataccatc caaaagcaag aaacaaacct
      301 attagatgaa aatcaaagct taaataacga tacatttaat acatcaataa gcgaaaacaa
      361 tcaaagctta aataatgaca ccaatgcaag taataatatt aatacaaatg aaaataagca
      421 aattttagat acggataaag aaaaattaaa acaagaaaat aaacaagcca aaatagaagc
      481 tcttaaaaaa gaaatcagca aacaacaaaa gatcttagaa agagaaagag ctgtaaaaaa
      541 agaacttcaa tcaaacaaat caaacaaaaa taaatatcta aataccgcta gagagtatct
      601 aagcatagga aaaaacagtc gtttagaacc tgaacttagc acagaaaata tgaaagttta
      661 tattttagat ggaaaatttt taagccaata cagaatcaat ctgttaaaag atatgctaag
      721 cgttatacaa gataatgcaa aagattatta tctaagtatt tttgtcaaaa tgctaccaaa
      781 aggggaaatg aaattaacta tctataacaa agaaattatc ttttcagata tgaaaaaagc
      841 ttataaatat attagtttag atagattaag cccatattta aacaatccaa aagaattaaa
      901 tgaacatata gcacgtgaag aaattttaga aagacttaaa cttcaaatta aaaaagatgg
      961 caaaggaagt gatttttcta aacatatcaa aagtttgaaa actggactta atacagcaca
     1021 atatttcttc ccgttttgtg aaattataga aattagctct attaaataag ctaaaacaat
     1081 aaaggcaaat aatgtatgat aaaaatttag aaaaagagta ttatcaaatt tgcgaagaac
     1141 gcggatattt tgaaatcgat ggcaataaaa ccatacaaga aaaagataaa aatttctgca
     1201 ttatgatgcc tcctcctaat gtcactggag ttttacacat aggacatgct ttaactttta
     1261 ctctacaaga tattatgacg cgttataaaa gaatggatgg ctataaggtt ctttatcaac
     1321 cagggcttga tcacgcaggt attgccactc aaaatgttgt agaaaaacaa ctccttgctc
     1381 aaggcattaa aaaagaagaa ctaggtagag aggaatttat agaaaaagtc tgggagtgga
     1441 aagagcaaag cggtggaaaa attttagacc aaatgagaac actaggcatc actcctgcat
     1501 ggagtcgctt gcgttttact atggatgaag gtttggttaa tgccgtaaaa aaagcctttg
     1561 tagaacttta tgataaaaga cttattgtac gtggaaacta catgataaat tggtgtactc
     1621 acgacggtgc tttaagtgat atagaagttg aatacaaaga aaacaaagga aaactttatc
     1681 atattaaata ctttttaaaa gatagcgatg aatttttagt agtagccaca acgcgtcctg
     1741 aaactttttt tggcgatact gcagttatgg tgcatcctga tgatgaacgc tatgctaaat
     1801 ttgtggacaa agaagtgatt ttgcctataa gcaaaaaagc cattaaaatc atagccgatg
     1861 aacatgtaga aaaagaattt ggaacaggag ttgtaaaagt tactcccgct catgacatga
     1921 acgattatga agtaggactt agacataatt tagattttat aagtgttttt gatgaaaaag
     1981 gaattttaaa cgaacattgt ttagagtttc aaggtttaga acgcttagaa gcaagagaaa
     2041 aaatcgtagc caaacttgaa agtcttggtt ttatagaaaa aatagaagag tataacaatc
     2101 aaataggata ttgttatcgt tgcaacaata tagttgaacc ttatatctcc aaacaatggt
     2161 ttgtaaaaaa agaaatcgcc caagaaagta tagaaaaagt tgcgcttgga gaaagtaaat
     2221 tttacccaaa tcactggata aatagcttta atgcttggat gaaagattta agagattggt
     2281 gtatttcaag acaactttgg tgggggcatc aaattcctgt gtattattgc gaatgctctc
     2341 atgaatgggc aagccaacat acgcctaaaa cttgtccaaa atgtcaaagt caaaatttca
     2401 aacaagatga agatgtgctt gatacttggt tttcttcagg actttgggct atgagtactc
     2461 taggctgggg aaatgaaaat tggggtaaag ataaaatttg gtctgaaaag gatttaaaag
     2521 atttttatcc caattcttta ctcattacag gttttgatat tttatttttc tgggtggcta
     2581 gaatgatgtt tcaaagcacc aatgtcttac atcaacttcc ttttaaagat atttatttac
     2641 atgctcttgt gaaagatgag caaggtagaa aaatgagtaa aagccttgga aatgttatcg
     2701 acccaaatga aagcattaaa gaatatagtg ctgatatttt acgctttact ttagcacttc
     2761 ttgctataca aggacgcgat attaaactta gcaatgataa acttttacaa gttagaaatt
     2821 ttacaaataa aatttataat gctacaaatt atctgctttt aaatgaaagt aaatttgaag
     2881 atttggaaaa tatcacactt cattcagaat tagcaaaata tatttatgcc aaatttcaaa
     2941 cttgtgttaa ggatgtaaga gaaaatttag acaattatcg ctttaatgat gcagccaata
     3001 ctctatataa attcttttgg gatgattttt gcgattgggg tatagagctt agcaaagccg
     3061 aaaaatcgag cgttaaagaa cttggtagta ttttcaaaga agctttaaaa cttttaaatc
     3121 ctttcatgcc ttttatcagc gagtatttat accacaaact aagcgataca gaacttaaaa
     3181 caagcccttc tattatgata agcaaatatc caaaatttaa agaacaagat aaaaatatag
     3241 aaaaaatctt ttctttgctc atagaaagca tagttagtat ccgccgtgct aaaagtttaa
     3301 tcgatcttgg aaattctaaa atagaaaaag cttatatcaa atttaacgat aaaaaaatca
     3361 aagatgaaat caaagcttat atgaatttta tcataatgct cgcaaagtgc gagcaaatag
     3421 aatttagtga agaaaaatta ccaaaggcaa tatgtgatgt tagcgagaat ttagaaattt
     3481 ttattacgct tgaaaatgtt gatttaagtg gtattttaac aagacttgaa aatcaaaaaa
     3541 ataagcttga aaaagaaagt ttcaagctta actccatgct ttcaaatgaa aaattcatcg
     3601 ctaacgcacc taaagaggtg gtggagcaaa ataaagaagc tctagaaaat ttaaaaattc
     3661 aacttgaaaa aatatcagtt gaacttcaaa atctaagagg ttaaaaattt gataaaaata
     3721 aaaaatttaa aaaaatatta tggcaaggaa ctcgtgataa acgatgtttc tttggagatt
     3781 aaaaagggtg aaatttacgc catagtaggt catagtggag ctggaaaatc cactctttta
     3841 agatgtatta atggacttga gaattatcaa gaaggaagtt taaaagtctt tgatcaagaa
     3901 attaaagatt taagtcaaaa aaaatcaaaa gagttaagaa tgcttagaaa agatataggg
     3961 atgatttttc aaaattttgc cctaatggag cgcaaaaatg tatttgaaaa tgttgctatg
     4021 cctttaagaa cacactatac tcagtgtaaa tttcatgcca agctttttaa taaagaatac
     4081 atgagcgaaa aagaaattgc ccaaaaagtc aattccttac ttgaaatcgt agggcttgat
     4141 cataaaaaca aatcctaccc aagagaactg agcggagggc aaaaacaacg tgttgctatt
     4201 gctagagcct tagctttaaa cccaaaaatt ttacttagtg acgaagctac ttcggctctt
     4261 gatccaaaca ctacaaaaaa tattttagag cttatatcta aaatcaatgc tgaatttggg
     4321 attactgttg ttttagtaac tcacgaaatg gatgtggtaa aagacatagc tcaaaaagct
     4381 ttattacttg aacatggaca aatcatagga agtggagcaa ttgatgagct ttttttaagg
     4441 cctaatgcca aaatgaaaga atttttagga gaaagcgact tcttgcctga gcacggactt
     4501 aatatcaaac tttactttcc aaaagaagtt gcccaaaata gcgtcatcac tcatatggca
     4561 agaactctaa atatagactt taacatagtt tggggtaaaa tagaaaaact gaatggaaaa
     4621 gccttgggaa atttagttat aaatataaat gaaaaggata aagacaaggt tcttgattac
     4681 atagaaaaaa gtggagtatt atgggaggtg gcatcatgaa tgaagaaaac atctctattg
     4741 tcagtgcttt ttttagtaga atttctcaat tttttaatga attttcttgg caggatatta
     4801 aagaagtgag tttaagttct atcacgagtt tcaatgaaaa ttatgaaaac attttaaaac
     4861 ctgcacttaa tgaaacaatt tatatgagtt taatggctgt actatttgga tttttattgg
     4921 ctatcattcc tggaatttta cttgctattt gggataaaaa tggaattaaa gaaaataaaa
     4981 tcgcttatag tattttagat tttattacca atatattacg cgcctttcca tttttaattc
     5041 ttatagttgt tcttttacca ctttctaaaa tcatagtagg cacaagcata ggtacaaatg
     5101 ctgccatagt tcctttagct atcggaatag ctccttattt ggcaaagatg cttgaaagcg
     5161 cttttaaaga aatagacaaa ggaattatag aagcagcaaa aagttatggt gctagcaata
     5221 ttcaaattat cttcaaggtt atctttagtg aagcccttcc tgctataatt agcggaatta
     5281 ccctaacttt gatctttacc attggttttt ctgctcttgc tggaactgtc ggtggtggag
     5341 gattaggaga tgtagctatt cgctatggtt atgaaagatt taacaaagaa gttatgattc
     5401 aaactgtagt tattttactt atattagttc aattagttca aattctaggt aatttatttt
     5461 atacttgggc taaaaatagt aaaactacat atatcattgc cactctattg attttacttg
     5521 gagttagtat agttatcaat ataaacaatg atgaaaattt cttttggcaa gtaattgttt
     5581 ttatcttatt tttaggaagt ttgctttata aaggtttcaa aaaataagga gattatatct
     5641 ccttttaaga taaatataag tttttttaag taaaatttaa aaaaaattaa aggaattaaa
     5701 atgatgtatc agatgcgtta atctgactat caacaagttt ttatatgctt cttcctgata
     5761 gtcagagtga atttattaag attaaagcaa gcacaaaatg actaaaaagg aaaaaaatga
     5821 aaatcaaatc tttatttata gcaagtattt taacattaag tcttaatgca aatgcattag
     5881 aaaccatcac agttgcagca actcccgtcc ctcatgctga aatcctagaa caagtaaaac
     5941 ctgatttaga aaaacaaggc tataaacttg aaatcaaaga atttacggat tatgttttgc
     6001 ctaatctagc tgttgataac ggagaagccg atgcaaattt tttccaacat actccttatt
     6061 tggaagaatt taataaaaac aaaggcacca aacttatcaa agtagctgcc atacacatag
     6121 aacctatggc tgtttactcc aaaaaataca aaagtctaga tgatattaaa gaaggggtta
     6181 aaatcgccat tccaaatgat ccaaccaatg aaagtagagc tttagatatt attgcaaaaa
     6241 aaggtttggt aaaatttaaa gataaggctt taaaaacacc tcttgatatt atagacaatc
     6301 ctaaaaaaat taaatttgta gaattaaagc ccgcacaact tccaagagct ttgaatgatg
     6361 ttgattttgc tgtaattaat tccaactacg ctctctctgc aaatctgaat cctgcaaaag
     6421 atagcgtatt tatcgaagat aaagaaagcc cgtatgcaaa cattcttgtt gtaagagtgg
     6481 gacatgaaaa cgatccaaaa atcaaagcct taatccaagc tctacaaagt gataaaatca
     6541 aacaatttat catagaaaaa tacaacggat ctgttttacc tgctttttaa ttttatccct
     6601 tacctaggga cttttttctt aagtacaaag gagtttttat gaatttattt aaaattatta
     6661 tactcgcttg cattctaaat ttatctagtc tatttgcaca aaacattact ataggagcca
     6721 ctccaaatcc ttttggtagc ttactagaac taatgaaaga tgattttaaa aacaaagggt
     6781 atgagcttaa aatagtagaa ttttcagact atattttgcc caatcgtgca ttagaggaaa
     6841 aagaacttga tgcaaattta tatcaacaca aacctttttt agaagaatac aacctaaaaa
     6901 aaggttcaaa tttaattgca acaacgcctg tacttatagc tccagtagga gtttatagta
     6961 aaaaaatcaa aaatttagaa aatcttaaag aaggtgctag agttgctata cctaatgatg
     7021 cgaccaatga aagcagagct ttagagcttt tagagaaagc aaaattaata gagcttaaca
     7081 aaaatactct aaaaacccca ttggacataa acaaaaatcc aaaaaaactt aaatttatag
     7141 aacttaaagc cgcacaactt ccaagagctt tagatgatgt tgatattgct ataattaatt
     7201 ctaatttcgc acttggagcc ggtctgaatc caagtaaaga tactattttt agggaagata
     7261 aaaatagccc ttatgtaaat tatgttgtgg tacgctcaga aggtaaaaat agcgaaaaaa
     7321 ccaaagtaat tgatgaaatt ttaagaagcg ataaatttaa agccatcatt aatgaacatt
     7381 ataaagatat attaatccca gctttttagg agtataatat gaatattaaa aaaatatttt
     7441 taagtgtttt atttacaatt agccttagtt ttggggcaga taaaaccata atcataggtg
     7501 caacaccaac gccttatgct gaaattttaa atttctctaa acccttattt caagaaaaag
     7561 gttggaagtt aatagttaag gaatttaatg actataatat acctaacatc gctttaaatg
     7621 aaaaagattt agatgcaaat ttatatcagc ataaaccttt tttagatgat tttaataccc
     7681 acaaaggaac aaaattaagt tctttaggtg ctattgtttt agttcctatg gctatatatt
     7741 ctaactccat aaaagatata aaagacattc ctaatggtgc taaaatcgct atacctaatg
     7801 atgctaccaa tgaaagcaga gctcttgatt tactagctaa agcaaattta atagagttta
     7861 aaagtcaaag cacccttaaa acccctattg acataagtaa aaatccaaaa aaacttaaat
     7921 ttatagagct taaagccgct caacttccaa gagccctaaa tgatactgat ttggctgtta
     7981 ttaccacaaa ctatgctctt ggagcaggtt taaacccttt aaaagatggt atttttatgg
     8041 aagataaaga tagtttatat gctattgttt tagctacaag aaaaggtgaa gaaacaagtc
     8101 aaaaaagtct tgttattaaa gaaattttaa caagcgataa aattaaaaat tttatcatag
     8161 aaaaatataa aggctctgtt atccctactt tttaactcta tacaaagcct tctaaaggct
     8221 ttgttaaact tataaaagct aaaatactat ttattgcatt ataattctta ggataaaaat
     8281 gaaaattatt tttttaactt tttttattgt gataaattat atccaagcag ctagtttaga
     8341 agaaatcaaa acagcactag ctaaagaatt tagaaataat ttccctaaaa ttataatttc
     8401 tcaaattgat ttaaaaataa catcactgcc taaagatttt gatcaatatg aatttctaag
     8461 aatcgctaat ggacgtttta atcaagcaca aggcttttta agggctgaat ttaaaactcc
     8521 gcaaaatata caaaaaaatg tattttttag atatttcatt caagcaaatt tagaaatttt
     8581 gaaaagcgaa cgcgctataa aaagaggaga taaacttgga gcttttgact ataaaagcgt
     8641 attgattgat tttgataaag ttcctttaaa tgccttaacc ttagatgatg tagataatct
     8701 tgtagctaaa agcaatatta acaaaaacgc tattttaaga gcaaatatgt ttaaaaccac
     8761 agctttaata cgccgaaatg atcctataat aggggtttta agcgaagcaa atgttgatgt
     8821 tttaatcgaa cttgtggctt tgcaaagtgc aaatatgggc gaaaggattc gtgcaaaaaa
     8881 caaagaaggt aaagttatgc aaggcatcgt agtgggtaaa aataggatga ttatacaatg
     8941 aaggttttat taggaatttc tggttcaagc agtgtcaatt taggcttaaa attattaaaa
     9001 aatttagaaa atcaatgcga actttattgt attttaaccc aaggtgctaa acttagcttc
     9061 aaagccgaaa atcaagcaaa tttagaagaa atttgtcaag aaaattttaa atatacttat
     9121 tttttagatg ataaaaattt aagtctaagt gtagcaagtg gatcttttgg aatagaaaaa
     9181 actatcattg ctccttgttc gatttcaagt ttagcaaaaa ttcacgctgg ttttgcagac
     9241 actcttttaa tgcgtgctgc agcagtagcc ctaaaagaaa gaaaaaaact catcttagga
     9301 gtacgtgaaa tgcctttttc tactttaaat ttagaacata tgttaaaact tagccaaata
     9361 ggagttatca tcgcacctcc tattatcgca agctattcta aagcaaacaa tctagagcaa
     9421 atggaaaatt ttatcgtagg caaatggtta gatcttttag aaataaaaca caatttatat
     9481 gaaaaatggc aaaattttta gtttaaattt gttatatttt taaaaaaaat tggagcaaaa
     9541 atgacttgtt tatatcctgg gacttttgat cctattacca acgggcattt agatgttata
     9601 aaacgggctt taaaaatttt tgatgaagtc atcgttgcca tagcaaaaag tgaacataaa
     9661 aaaccttgct atgatttaga aaaacgcaaa gaactagccc tgcttgcaac acaaaattta
     9721 aaaaatgtta aaatcattgc ttttgataat ttgcttgtag atttagccaa agaattaaaa
     9781 gttaatacta taatccgtgg acttagagca gtgagtgatt ttgaatacga attgcaaatt
     9841 ggctatgcaa atcacgcact ttgggaagat atggaaacca tttatcttat gccaagtcta
     9901 aaacatgctt ttatttcaag ttctattgtt cgctctatag tagcacatgg aggcgatgta
     9961 agttctcttg ttccaaaaga aattctacct tttttaaagg atcaatcttg tatgtagttt
    10021 ttgaaggtat tgactgcgta ggaaaaagta cgcaaatttc acttttaaaa gaaatttaca
    10081 aagacgccat tttcacactc gaacctggcg gaacagaact tggaaaacat ttaagagaaa
    10141 ttttacttaa taaaactcat cctattaaca aaagagctga actcttgctt tttttagctg
    10201 atcgtgctca acattttgaa gaaatcttaa aaatcaatca aaacaaactc attattagcg
    10261 atagaagttt tatttcaggc atggcttatg ccaaagattt tgaaaacgat ttgctttttg
    10321 ctttaaatag ttttgcttta gaaaattttt ttccacaaaa aattatcttt ttaaaaggag
    10381 atgcaaacct tatccaagaa cgcctcagtc aaaaagaact agatagcata gaaaaacgtg
    10441 gcattgagta ttttttaagt gtgcaagata aactcgaaaa agtgcttcat tttttaaaag
    10501 aaaaaatttc tatagaaatt ttaacacttg acgcaaaaga aagtaaagaa aaattacacc
    10561 aacaaataaa ggaattttta caatgattaa cgctttaaaa ggaatgaaag atttattaga
    10621 taaagatgca tattgttatg aaaaagtgat taaaacctgc gaagaagtag ctaaaaacta
    10681 tggctttact tttatcaata caccgcattt agaactttgc acccttttta aaagaagcgt
    10741 aggagaaagt tctgatatag taggcaaaga aatgtatgaa tttatcgata aaggcgaaaa
    10801 tcatgtttgc atgcgtcctg aaggaactgc tggggtggtg cgtgcctata tagaaaaaaa
    10861 actcgataaa aacactagtg tgaaaagatg gttttatcat ggttctatgt tccgctatga
    10921 aagaccccaa aagggacgct taagagaatt tcatcaattt ggcgttgaaa gttttggaaa
    10981 cgcaagcgtt tatgaagatg caagtattat tttaatgtta gtagaaattt tttcacgctt
    11041 ggatattaaa tttaaattac tgattaactc tttaggctgt ttaaaatgta tgccaaaata
    11101 tcgtgaaaat ttaatacatt ttttagatag caaagaaggt ttttgcgagg attgtttgcg
    11161 tagaaaaaac ttaaatccta ttcgtgtttt agactgtaaa aatgaacatt gccaaagctt
    11221 acttaacgat gctccgcttt taaatcaaaa tttatgctca tcttgtcaaa aagactttga
    11281 aattttacaa agcgttttaa aagaaaatgg agtggatttt gaagtggatt ctaagcttgt
    11341 tagagggctt gattactact ctaaaacggc ttttgaattc attagcgatg aaattggtgc
    11401 aaaagctgct attgctgggg gcggaagata tgatagactt attgaatatc ttgatggaaa
    11461 aagtggtttt ggtgtaggtt ttgccatggg tatagaaaga attatagcca ttttagaaca
    11521 aaaagaagaa aaagtccaaa gagaaggaat ttatctttgt gctatggatg aaatttatat
    11581 ccaaaaactt ttgcatatcg ctacaaattt aagaaaagaa cataaagtgc ttttaagcta
    11641 tgaagcaaga aaactagcta aacatctcga aaacgcggat aaaaataatg ctgaaatttt
    11701 tctttgtatg ggagaaaatg aagcacaaaa tgaaagtttg ttttataaaa atttagcaaa
    11761 aaaagaagaa aaaatgatta aaatttcaga cttaaagaag gttttatgat ggattatggt
    11821 attgatattt ggggaaatga aaattttatt atcaaaaatg gtaaagtttg tatcaatcac
    11881 gaaaaaaagc ccgctattat tgatatagtt aaagaattaa gagatgatgg atacaagggg
    11941 cctttacttt taagatttcc tcatcttatc caaaaacaaa ttgaaaatat ttacggaaat
    12001 ttcaataaag caagaaagga atttggctat aaaggaggat ttaacgctgt ttatccttta
    12061 aaggtaaatc aataccctgg ttttgtaaaa aatcttgtaa agcttggaaa agactataac
    12121 tacggacttg aagcaggctc taaagcagag cttttactcg ctatggctta taataatgaa
    12181 ggtgcaccta ttacagtaaa tggctttaaa gatagagaac ttatcaatat aggctttatc
    12241 gcagctgaaa tgggacataa tatcacttta accatagaag gacttaatga acttgaagct
    12301 atcatagaca tagccaaaga acgctttaaa cctaaaccaa atataggctt acgcgtgcgt
    12361 ttgcattctg ctggagttgg aatttgggca aaaagtggtg ggattaattc taaatttgga
    12421 cttacatcca ctgaacttat agaagcggta aatttactca aagaaaacaa acttttagaa
    12481 caatttacca tgattcactt tcatctaggc tcacaaatta ccgagattca tcccttgaaa
    12541 aaagccttaa atgaagcagg aaatatttac acagaactta gaaaaatggg agctaaaaat
    12601 ctaaaagcta tcaatcttgg tggcggttta gctgtggaat actcacaatt taaaaatgaa
    12661 aaaagtagaa attacaccct aagagaatac gctaacgatg tagtttttat cctaaaaaac
    12721 atagccgaac aaaaaaaaga tttagagcct gatattttca tagaaagtgg acgttttgta
    12781 gcagccaatc acgctgtttt aatcgctcct gtattagaac ttttttctca agaatacgca
    12841 gaaaacaaac tcatacttaa aaaacaaaat ccaaaactta tcgatgagct ttacgatctt
    12901 tataaaagca taaaaccttc caatgcttta gaatacttgc acgatagcat agatcattta
    12961 gagagtattt taactctttt tgatttgggc tatgtggatt tgcaagatcg ttccaatgct
    13021 gaaattttaa ctcatttgat tacaaaaaaa gctatcttgc ttttaggcga taagcaaaat
    13081 cctgcggatt tacttgccat acaagatgaa gtgcaagaaa ggtatttggt aaatttttcg
    13141 ctctttcaaa gcatacctga tttttggggc ttagaacaaa atttccccat catgccactt
    13201 gatcgcttag atgaagaacc gactcgaagt gcgagcattt gggatataac ctgcgatagc
    13261 gatggagaaa tttcatactc taaagatcaa cctttatttt tacacgatgt agatgtagaa
    13321 aaagaaaatt attttctagg gttttttctt gtaggtgcct atcaagaagt acttggaatg
    13381 aaacacaatc tttttactca tcccactgaa gctattataa gtatcaatga aaaaggctat
    13441 gaagttgagg ggattataga agcacaatcc atacttgatg ccttagaaga tttagactat
    13501 gatatacacg ctatcatgga tatacttaat gaacgcataa gtaattctaa gcttgtaaat
    13561 gacaagcaaa aaaagcatat tttaggggaa ctttatcttt tcttaaatga taatggttat
    13621 ttaaaaagca taggagttta gatgaatttt tggggtatta taaaagaaga tttttctcag
    13681 ccaaaggtac aagatccagc ttttaattct tgtatagaac ttttttttaa ttaccctgga
    13741 gtatgggctg tagtaaatta ccgctttgca catttttttt acataagaaa ttttaaacgc
    13801 attgctagaa tgattagcgg aatttcacaa ttcttaactg gggtagattt gcaccctgga
    13861 gcagaacttg gaaggcgtat ttttatagat catgccaatg gagtggttat aggtcaaaca
    13921 gcaattatag aagatgatgt tttaatttat caaggcgtta ctttaggtgg aacaagcctt
    13981 gaaaaaggta ctaaacgcca tccaaccata aaaaaaggag tgatcatagg ctcaggcgca
    14041 aaagtgcttg gcaatatcac cataggagaa aatgccaaaa taggctcaaa tgctgtagtg
    14101 gttaaagata taggtgcaaa tttaactgcc gttggaattc ctgcttatat tatcgaagag
    14161 cgtaaaaata aaaatattag agccatagat gcaaattgcg atgacaaact agaaaagcta
    14221 gaaaagaaaa ttttagaact tgaaaatctt atattaaaac aacatgaatc acaaaaataa
    14281 taatttttta taatacataa aattatatgt attattatgc gtattaattt ttcctaaaaa
    14341 attaatacaa attttcacat ttattaaaat ttataactca tttttaaatt aaatttattg
    14401 taaaaatgca attttctgct aaaattaaac aaaaactatt aaggattgaa aaatgcttac
    14461 aaaaagatct caagttttag aagaatctat cactttagcc atcactgcac ttgccaatga
    14521 acttaaagcc aaaggcgagg atatcattag tttttcagcg ggtgaacctg attttgacac
    14581 accacaaacc atcaaaaatg ccgctataag tgctattgaa aaaggatgtg gaaaatacac
    14641 tgctattgcg ggaattcctg aagtattaaa agctattcaa accaaattta aaaaagataa
    14701 taatcttgat tatgaaacaa atgaaatcat cagcaatgta ggtgcaaaac actctctttt
    14761 tgaatgtata gaatgcttag tagaaaaaga tgatgaagtc attatcccta gtccttactg
    14821 ggtaagctat cctgaaatgg taaaatttgc aggtggaaaa cctgtattta tagaaggctt
    14881 agaagaaaat ggctttaaaa ttaccgctga acaattaaaa aaagctatca cagctaaaac
    14941 caaggtttta atgttaaatt ctccttcaaa tcctgtggga tcgatttatt ctaaagaaga
    15001 attaactcaa attgctaaag ttttagaagg aacacaaatc actgttttaa gtgatgaaat
    15061 gtatgaaaaa cttcgctatg atggttttga ttttgtagct tttgcaagtg taagcaaaga
    15121 tgctttaaaa cgcactgtaa ctattaacgg acttagcaaa tgtggagcta tgccaggatg
    15181 gcgttttggc tatatggcaa gcaaaaataa agccctaatt tcagccgtta aaagacttca
    15241 aggacaaagc acttcaaata tttgctccat cactcaacat gcagccattc ctgctttaaa
    15301 tggagaatgt gataaagata tagaaaaaat gcgtcaagcc tttgaaaaac gccgtaactt
    15361 agccttagac atacttaaac aaatcccaaa tatcagtgtt tataaaccag aaggtgcttt
    15421 ttatcttttt gtaaatatac aaaaaataga aaaagattct atgaaatttt gccaaaaatt
    15481 gcttgaacaa gaaaaagttg ccgttgttcc aggtataggt tttggaatgg atggatattt
    15541 taggctttct tatgccacaa gcgatgagct tatcaaaaaa ggtttagaaa gaatagcaaa
    15601 tttcattaaa aactataaat aattctaggt taaagcctag aattatttaa acaaattaaa
    15661 accttataaa atcaaaataa aatcaaggct ttttaagcac agcatttacc ctttgaatac
    15721 tatctgattt atttaaactc aatcttatta tagaattttc caatccacct aaagaatgcg
    15781 ctacatttgc ctctaggctt atcatatcta aaacatttaa ttcaaatttt tccttttcca
    15841 cttcaaacca aattttaccg cttaaaactt gaacatgtat agcaaaagga gctttatgct
    15901 ctttcatcac gctatcttta gctaataaaa tttgaatttc tttacctttt tcattatcaa
    15961 ttaaaacatt gattttcact tcttttgggc taaattccgc tccattccat tgaatgattt
    16021 tcacaaaatc tcctttttta gttttacaaa actatagcaa aagccaaaat ataaattata
    16081 aacttgtgtt aatttattct tctttccacc aaaaatcctg tttaaattta gctcctactt
    16141 cataagcctc gcccattttt ggtgtgataa ggggtaaatc taaattttca taaagaaatt
    16201 ttaccacctc attccatgca tgagttcctg ctaaaaatct cccccaatgt ataggcatga
    16261 cagcctttgc attaagatct tttgcctctt ttaaaatttg ctcaggaaaa gagtgtgaat
    16321 atggccaagc gatattaaat tgtccgcttt caagacaagc taggtcaaaa cttccaaaat
    16381 actcacctat ttttttaaaa tgtgtaaaat accctccatc tgcgctaaaa aacactctct
    16441 tatctacact taaaaattcc atcacaaaag aagcccaaag ggttttgttt ttaccatctc
    16501 ccctacttga actgtgctgt gcaggtgttg caatgatttt taaatcacca aattctattc
    16561 cactccacca atcaagctct atgatttttt tctcgctcac cccatagctt tttagataat
    16621 ttcccacttt taaaggagtg ataaaaaatt tagccttatc ttttaaagct tttacactct
    16681 tagcatctaa atgatcaaaa tgcgaatgcg tgataatcac agcaaaaatt tcattaaaat
    16741 catttacatt ataaatagga acatttttaa aagccttgtt aataaaagaa ataggcgaag
    16801 catgagtgtt aaaaatagga tcaatcaaaa ttttatactc tttaaaactt ataaaaagcg
    16861 aagaatggcc aagccaagta atatgtgggg tgctaaaacc actcaaatca ggcttgaaaa
    16921 aaggtaactt aaaagaaggg atggcatttt ttggataaag ataataatac ctcaaaattt
    16981 ctttaaaaga cactttagga gttataagac tgtgctcatt ttcattaaga aaaatttcat
    17041 attttttacc ctgcactttt ttagctttta atctttcatt atttgaaata tcaaaggttt
    17101 taaaaaaatc tacactcaca aacatttatc cttttttgac aattttatac tttaaaaatc
    17161 attacaaacc atattaaaca tggtatttgc tatcttgtct ttaaattcta tattttgatt
    17221 aaattgttta aaaagttcta aatttaactc caagatatct tgaattttat cttttaaaag
    17281 cgcatcaaac tcgatacgag aattttgtat atcggatttg ctaaaagttt cacgtattct
    17341 ttcatttttt gctatatcat cttttatatc atataagatt ttagcaattt tatcgctttc
    17401 attaaagtct atatttgcgt atttgttatt aaaatctttg atgatgtttg aaagttcttc
    17461 taattcagct tcaacacttt tactcgaacc atctgcgaac gaaggcttta gctctccatt
    17521 tccttgtaaa acgatgtctt gtgttttatc aagttgtaag cgataactat caaaatccac
    17581 attatctaaa attcctttag ctaaatcctc tgatttaggc aagatgatct tactagcaag
    17641 ttttttaagc aatatataga gtttttcaag ctctatgtct tcataaggca atatttgtgc
    17701 aagaaaagaa tactctttaa gataagtttt tgctttatta taaaaatcta atttttcatc
    17761 atcacttttt tgattaaatc tagctagcat tatgtccaat tttgcatgaa tgatattttc
    17821 tttttctttt cttaaaatag catttgtaaa atcatctatt tcttcttggg tataaatttc
    17881 atactcattt agatttgcct ttaaatcaaa aattctatta tcatccgtgg cttcacttaa
    17941 ataagtttgc tcataaaaca cactaaaaga ttttgctata tcttcatgag tatttacaaa
    18001 atctagcaca aaagtgtttt ctttgttttt gcaagttcgg tttagtcttg atagagtttg
    18061 tactgcactt accccactta atactttatc cacatacata gtatgtaata atggctcatc
    18121 aaatccggtt tggtattttt ctgcaacgat taaaaaacga tacccatctt ttttaaattc
    18181 atcttttaaa acattttccg caaaaccatt taaaccattt tcgctataaa tttcaccgtt
    18241 taaatttact tcgcctgaaa aagctacgat ggctttaaaa tgtggataat tttttctcaa
    18301 atactcccta aaaacaagat aatacttcac agcattctct cttgaacttg ttacgatcat
    18361 agcttttgct ttacctttta tctttttaaa gctgttttgg aaaaaatgct cgcacatgat
    18421 ttgtgatttt tgctcgattg ttctgatatt gttttgcaca taagctttta gttttgtgct
    18481 tgctcttttt ttatcgtatt ttggattatc atttgtgcaa gatatgattt tatagtagct
    18541 tttataagtc gtatagcctt ttaatacatc gagtataaag ccttcttcta tggcttgctt
    18601 catcgagtaa agatgaaaag ggataaattt ttgcccttca tcaacctcac aaggcatacc
    18661 aaacatttcc aaagttttag gcttaggtgt agcagtaaat gcaaaatacg aggcattagg
    18721 ctggagcttt ttgcttttta tgatttctag aatttcatct tctaaatttt ggctttcatc
    18781 gccgcttttg tctcttatag cttctgccat tttttgagca ttgcttccgc tttgacttga
    18841 atgagcttca tcgataatga tagcaaaagt tttgcttttt aaagttttga tttcatctaa
    18901 aataaaagga aatttttgta tggttgtgat gatgattttc ttaccttctt ctaaagcatt
    18961 tttaagctgt ttgcttccat gagtgatagc ttctactaaa ttttttgtct gcgaaaagga
    19021 ttttacattt tctcttattt gactatcaag cacttttcta tcggttacta cgatgataga
    19081 atcaaagata tttttttcaa gtctatgcaa gcttacgaga ttatgtgcaa gccaagatat
    19141 agaattactc ttgccacttc ctgcactatg ctggatcaag tagcgttgcc ctgtgccgtt
    19201 ttcttttgca tgggcgagta gcttttctac tacatcgaat tgatggtatc taggaaatat
    19261 gatgatttct tcatttttct tttttacaac ttgcacaaaa ttaaaaaata aatttagcaa
    19321 agtatctttt ttaaagattt tctcccacaa ataagctgtt tttataccat cacttggcgg
    19381 attacctgct ccatttgcta ggcctatttt gccactacca ttatttaaac caagattaaa
    19441 aggtaaaaat gtagtcgcat cttgatctaa tttcgtactc atgtaacaaa gatcatgatc
    19501 tagcgcaaaa tgcactatcg tatagttaaa tatagcttct tttgggtttc tgtctttttt
    19561 atactgcttt atagcgtgaa agacattttg tcctgtgaaa tggtttttaa gctctatggt
    19621 gataagaggc aagccattta aaaagatcgc tatatcaagg gagtttttat tttgcgtgct
    19681 atagtgaagc tggcgtatga tagaaaggct gttttgctcg tattttttca cgctttcttc
    19741 gtttgcattg gtatttggct tggcaaaggc taggtaaatt ttgatgcctt tgatctctac
    19801 atagccttgc aaggctttaa ctatgccttt ggttttaatc tgcgagaaaa tacgatcaaa
    19861 aagttctttt ttatagtttt gtccgcaacg ctttttaagc tcttcaagtg ctacactttg
    19921 cgtagcttgt aaaaaatttt caaaaagctc tacatctaaa cataaatttt tatcgtaatt
    19981 ttcatttgtt cttttgatat aggcatggtt ttctaacaag taagactcta tgaaattttc
    20041 taaatctttt tcttggtagt tagtcattgt tagtccttag tatcttttgt gaaatcaaat
    20101 aaagttggtt ctaaactttc ttctttttgt tttcttcttt tctggccaaa ttttgtaatt
    20161 ttagaaatat cattagcttg tatactataa acttttttta ctctatatga tgttttaatt
    20221 tcttctccat aatcatcaaa agttttactg atttccaatt gacaattaat agtcgttcca
    20281 ttaataaaat tatattcttg cctaatgaca gcatttttaa aaccactatc acccatacta
    20341 aaatcaattt tttctccatt ataaataccc ctccatttat atttaccttc ttttaataca
    20401 ggtgatatga tttctatttc agcttcttca atggtttcta tatctttatt ctcttcaata
    20461 ataaaagatt taaattgttc tcgttcaata attaattcat ttgaattgtt aaattgatat
    20521 cctatttttt taattttttc ataattttct acttttt
//
LOCUS       DAPIWB010000031        20320 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.032, whole genome shotgun sequence.
ACCESSION   DAPIWB010000031 DAPIWB010000000
VERSION     DAPIWB010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20320)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20320)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20320
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.032"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(3..722)
                     /gene="kdsB"
                     /locus_tag="RJ266_000902"
     CDS             complement(3..722)
                     /gene="kdsB"
                     /locus_tag="RJ266_000902"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HDV7354665.1"
                     /translation="MIIIPARLKSSRFHEKILCDVGGVPMFVATARRVSSVDEVCIAL
                     DDEKVLSIAKEYGLNAVLTSKNHESGTDRINEACKKLALKDDEIIINVQADEPFIECE
                     NLLKFKEFASSCLDKKAFMASCYKKITQEEAMDPNLVKLLCDKEGYALYFSRAKIPYE
                     RENYEESFKGHLGIYAYSVKALREFCSLLSSALERAEKLEQLRAIENGKKIKMLEIST
                     TSMGIDTKEDYEKALKIYLEK"
     gene            complement(719..2131)
                     /locus_tag="RJ266_000903"
     CDS             complement(719..2131)
                     /locus_tag="RJ266_000903"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HDV7354666.1"
                     /translation="MKLVESRNVNNVSSFKEALINPNAPEGGLYSPLNLPIFEGEKYA
                     NLSYKDFALKLIESFGFGEEELFKKALKSYESFDDKNTPISLQKISEKTYINELWHGP
                     TRAFKDMALQPFGVLLSEFSKDKNILIICATSGDTGPATLKSFENAKNVKVACMYPKG
                     GTSGVQELQMRALDKDNLKVFAIDEDFDAAQRTLKELLFSKDFQNEIRALNYELCVAN
                     SVNFGRILFQIIYHYYASLKLFNEFLEEVQIIVPSGNFGNALGAFYAKKMGAKISKIK
                     IASNVNNILSEFFNHGVYDLREKSLKKTISPAMDILISSNIERLLFAKFKDKRTKELM
                     NLLKNERYFKLEKEELQSLQEDFEADFCTDEECMQFIKQSKILIDPHTATCFKMLDPL
                     KPSIITSTAEWTKFTPSMIKALYDRDSKNEKEDLKFIAKEFNVQVKDEILALFDLKNS
                     DEKVFEVKNIKKEILDWMQK"
     gene            complement(2128..3054)
                     /locus_tag="RJ266_000904"
     CDS             complement(2128..3054)
                     /locus_tag="RJ266_000904"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HDV7354667.1"
                     /translation="MNEEKNYELWLDNYFFKPNFWQKCLAFVLFPLSVLYAFFAILNT
                     FFRKKIVFKKPVISVGNLSFGGNGKTPLCKAIAREFDGVFIVLRGYKRKSKGLFVVKN
                     QNEILCTLTQSGDEAMEYAFEENIKGVIVSEDRVKGIEKAFELGAKIVVLDDAFSKFH
                     IKKFDILLEGKIKPYFNFTLPSGAYRLPKFYEKRADFIALEGRDFVRYSFVKENPKAI
                     LVTAIAKPFRLYEHFIKARACYFFKDHYEFKKEELENLLKKHNCDTLMLTFKDFVKVK
                     DFGFKCQIIELNIELKDSLREKIKTYIKEFEQ"
     gene            complement(3058..3798)
                     /locus_tag="RJ266_000905"
     CDS             complement(3058..3798)
                     /locus_tag="RJ266_000905"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HDV7354668.1"
                     /translation="MDWQKITEKMCDFIQEKVKNSQSQGVVLGLSGGIDSALVATLCK
                     RALKENVFALLMPTQISNKVNLEDALRLCADLNLEYKIIEIQSILDAFIKQSENTTLV
                     SLGNFAARIRMSLLYDYSALKNSLVIGTSNKSELLLGYGTIYGDLACAFNPIGSLYKS
                     EIYALAKYLNLHENFIKKAPSADLWENQSDEADLGFSYAKIDEGLKALETNDEKLLKT
                     LDPSLIAMLKNRMQKNAFKGKMPEILEI"
     gene            3872..4468
                     /locus_tag="RJ266_000906"
     CDS             3872..4468
                     /locus_tag="RJ266_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDV7354669.1"
                     /translation="MQIIKQACGAYETNCYILFGEHGEIIIDPGFDALNFIKKHVKNP
                     LAILNTHGHYDHVWDNEKVKQAYQIPIYIHKNDTFMLEDPFNQGFMPSKADYLIDDEN
                     IISIGGLDFKFHFLPGHTPGCTMIEIVGKNIMFSGDFLFYRSIGRWDFPYSDANLMKQ
                     SLEKVMTYKEDFKLLPGHGQETTLKEEQVHLPSWLRYF"
     gene            4480..4785
                     /locus_tag="RJ266_000907"
     CDS             4480..4785
                     /locus_tag="RJ266_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354670.1"
                     /translation="MELDQILLYAFIFLNLFALFGLFLGNKKKNQFNDKKFYKICPCK
                     KMAENGSLSTICIYSAVGGFFYSVLSIGFIGFGNWTLNFIFLLALLSVFLGWKLKLD"
     gene            complement(4826..5605)
                     /locus_tag="RJ266_000908"
     CDS             complement(4826..5605)
                     /locus_tag="RJ266_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase"
                     /protein_id="HDV7354671.1"
                     /translation="MNTEFQGKTLVISGGTRGIGKAIVYEFAKVGANIAFTYNSNAQI
                     ADEMVQDLEKNYKIKARAYEFNILEPETYKELFEKIDVDFDRVDYFISNAIISGRAVV
                     GGYTKFMKLKPKGINNIFTATVNAFVVGAQEAAKRMEKVGGGSIISISSTGNLVYIEN
                     YSGHGAAKAAVEAMARYAATELGEKNIRVNVVSGGPIETDALRAFTNYEEVKQATINL
                     SPLNRMGQPEDLAGACLFLCSSKASWVTGHTFIVDGGTTFK"
     gene            complement(5605..6501)
                     /locus_tag="RJ266_000909"
     CDS             complement(5605..6501)
                     /locus_tag="RJ266_000909"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HDV7354672.1"
                     /translation="MDKNIIIGAMTALITPFKNGKVDEQSYARLIKRQIENGIDAVVP
                     VGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGAD
                     GILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCE
                     NIYGIKEASGNIDKCVDLLAHEPRMMLISGEDAINYPILSNGGKGVISVTSNLLPDMI
                     SALTHFALDENYKEAKKINDELYNINKILFCESNPIPIKTAMYIAGLIESLEFRLPLC
                     PPSKENFAKIEEVMKKYKIKGF"
     gene            complement(6494..7744)
                     /locus_tag="RJ266_000910"
     CDS             complement(6494..7744)
                     /locus_tag="RJ266_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDV7354673.1"
                     /translation="MIAYEKIQLKNKLEVYALPVNKNSDVISVDIFYKVGSRNEIMGK
                     SGIAHMLEHLNFKSTKNLKAGEFDEIVKGFGGVDNASTGFDYTHYYIKCAKKNLDKAL
                     ELFAELMANLNLKDEEFQPERAVVLEERRWRTDNNPLGYLYFRLFNHAFMYHPYHWTP
                     IGFFKDIENWSIEDIKEFHSIYYQPKNAILLVSGDIESKEVFELSKKHFEKIKNTKTI
                     PKIHTKEPKQDGVKRIYLHKNSDTELLALAYKIPNFKHKDIPALNALSELLGSGKSSL
                     MSEILIDKLNLINDYYAYVNDCIDDNLFIFICNCNPNVNAEKVEKELLKIIDKLKMGK
                     ISQKDLQRVKNNVKSDFIFSLNNASAVANIYGSYLARGDINPLLNYEKDIQNLELKDL
                     ISCAKKYFIQENSTTVILRKDSNG"
     gene            complement(7741..8799)
                     /locus_tag="RJ266_000911"
     CDS             complement(7741..8799)
                     /locus_tag="RJ266_000911"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HDV7354674.1"
                     /translation="MAYEMIKPLLFKLNPEHTHALVEYSLRALSASFPGALSFLAHKY
                     IVDNESLRQNLLGLDFNNPVGLAGGFDKNATMIRPLSALGFGFLEVGTFTPKPQEGNE
                     KPRLFRLVKQESIQNAMGFNNEGAEKIALRLAKTYPFVLPLGVNIGKNKITPNDKALE
                     DYFTLFRDFKDLCDYFIVNISSPNTKNLRELQNDDFLNTLLEEAKKITSKPILIKIAP
                     DMKIDDALNLCENAIKKGADGFILANTSVDYSLLDNNRTFGGISGRLITEKSGIFFKE
                     VAKILFGKTLLIASGGIDSADIAYERIKNGANLVQVYTALIFKGPSLVKNINQNLIEL
                     LRKDGFLHISEAVGVNLK"
     gene            complement(8831..10573)
                     /locus_tag="RJ266_000912"
     CDS             complement(8831..10573)
                     /locus_tag="RJ266_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7354675.1"
                     /translation="MHNEMNLKEVLIRFKPFYKRYWKQFAIAIFGMILASGGTAGSFY
                     TLEPILNYIFVEKNEALLYTVPFLLVLMYFFKNLGTYLQSFYVSFIGTDMLRVLRARV
                     LKNVLRLDMDFFKRYRSGELVSRCTNDINALQSIVSNIIPDFFRELLTAIGLLAVVLY
                     QSPTLAFFALVILPLAIFPLVWFAKKLKKYARNIQETNSDLLSYLGEIFSNIELIKAN
                     DNEKKESDKFAKHNDTLCKLNLKSARIDALTSPLMDMMGSVGVAVVIIVGGREVINGS
                     MSVGSFISFVSALFAIYTPLKRLSSLYGKLQGAVAASERTFYLLDLEPQIKGGSKELK
                     NIEKISFENVEFAYENPHKSVLKGVNFDFVKGQMLALVGTSGGGKSSIINLLMYFYEK
                     QKGKILLNQEDISTFTIESLHAKIGLVTQNIYLFNDSFAANIAYSEELEEEKVIQALK
                     LANAYEFVKEMGGIWAEVKEHGKNLSGGQKQRIAIARALYKNPDVLIFDEATSALDNE
                     SEKAIVKTIENLKQDRLILVVAHRLSTIENADKIVVLDKGKVLAIGKDEELLQTCSLY
                     QKFKSKEKTKPSFS"
     gene            complement(10566..11954)
                     /locus_tag="RJ266_000913"
     CDS             complement(10566..11954)
                     /locus_tag="RJ266_000913"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HDV7354676.1"
                     /translation="MRLLDSVTKEKIKLDKKDISIYLCGPTVYDDAHLGHARSSVCFD
                     LLRRVLLAQGNRVKFARNYTDIDDKILKKMAQSGQTLEEITEFYIKSYEEDMRVLNVL
                     DPDFKPRATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENIS
                     RLSNEVQKRNESDFVLWKFDENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGI
                     DLLFPHHENEAAQCRCGCKRKLANIWLHNGFVKIDGEKMSKSLNNSFFIKDALKEFMG
                     EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKS
                     EIAKQILEILNDDLNISKALALLDDFISSANLELDKENKNKILKQNIKEALSELAKIF
                     GFGFMDTTLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLD
                     TPNGTIWEKINA"
     gene            complement(11954..13405)
                     /gene="murJ"
                     /locus_tag="RJ266_000914"
     CDS             complement(11954..13405)
                     /gene="murJ"
                     /locus_tag="RJ266_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HDV7354677.1"
                     /translation="MKSLVFKNFIVNALGILFSRILGLARDVLIALFLGAGLYSDIFF
                     VALKMPAFFRRIFAEGAFGQSFLPNFVKAKKKGAFCVSVMMQFSLIVFLFCLLVSFFS
                     SFFTKLFAFGFNADTIALAAPLVAINFWYLFFIFLVTFLGAILNYRQKFFITSFSAAL
                     FNLSIVIAAFFVDKNAPQNTLYYFSYATVLSGVAQLILHLLVLKNNPVIRAMALSIKF
                     KKAKAKLQGFYGNFFHGVLGSSATQFSSLLDTTIASFLMSGSISYLYYANRVFQLPLA
                     LFAIALTQVSFPKILKHLKSDQENLALKFMQRALALLSILLIASSIVGSVFALEISKL
                     LFERGNFTHEDSVITAYVLIAYLIGLLPFGLQKLFSLWLYAKFKQKTAAWIAVKSLII
                     SALCSMAFIFLIKDESLKVIAVALSSSISAFYLLGANIKEFGFKKFFALISIKICLLV
                     IVALIVFTILLILIKPYILSFFIGIFTSFKGVF"
     gene            13509..15368
                     /locus_tag="RJ266_000915"
     CDS             13509..15368
                     /locus_tag="RJ266_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF342 domain-containing protein"
                     /protein_id="HDV7354678.1"
                     /translation="MALDEKIIAYTENPARELLSVASRTNLSLNELDFSLLAFSTQYR
                     FGDLEWEKISEKELTLFDKDEFFLKNDLQIKQEYKIEIFHGINQSKASQAVKLVANKN
                     LTKIIAQIDFTNLDFHEKLALELLQNIYKKMLKLKFLIGIRIFDFKKNLMSFCNQHKN
                     TPLNKTIQITVAQGIDPIESQDESLILTYKEKTKNYTIDEKRSGIIVVDENEVVLKHA
                     KFKQGKEGKDLNLHTLKVLAANENKVKFSCSSAFKQVEQDGYTEYIALKKGYVVQDGE
                     KFDIANELDFNGVDFKNIGIIRAGLDKNVKINIKFLSEVKDAVNSGVGIECEELNVVG
                     SVGSNTQLNAAKMKIEGTTHSKAKIQAKQAYIKTHRGFVEAEILNIDLLEGGTIKAKE
                     VRIKKSLGGNIQADKIYIENLESNNSCVFFKNTTIERINGDNNKFHAKIKTLDSNYDE
                     EFVILGEQISKLNHKMNKIRQYILSSKNGILSVEKKITELKNQGQNVPIQYEKALKDF
                     SLQNLELNKLQNEEKELLERKKSLQLELINLQKMLFEATFINKSGKWTDMNEIKFSLL
                     EPKEDIFYSSFVNESAKFIGIKKVIQNNQESIEIHKKLDYEEKDIAWLSASKE"
     gene            15344..15895
                     /gene="ruvA"
                     /locus_tag="RJ266_000916"
     CDS             15344..15895
                     /gene="ruvA"
                     /locus_tag="RJ266_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HDV7354679.1"
                     /translation="MVVGIEGIITKKEPTFIIVKCVSGLSYGIFISLFCSAKIQTQEK
                     HEFFITQIIKEDSNKFYGFLDKDEQKMFEMLLKVNGVGANTAMAVCSSLDVNSFYKAL
                     SLSDESVLKKVPGIGPKSAKRIIVELSDTKTKLENVSDDKSEALAALLTLGFKQEKII
                     SVLASAQATGTSELIKEALKKLG"
     gene            15905..16945
                     /locus_tag="RJ266_000917"
     CDS             15905..16945
                     /locus_tag="RJ266_000917"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HDV7354680.1"
                     /translation="MKFAILFGGNSYEHEISIVSAVVLKKVINQNLEFIFCDEERRFY
                     HIPSEKMNSKTFSTKAYKKEKELFIQQGGFFSKGFLKENKLECECVINLIHGGDGEDG
                     KIAALFEFYSIKFIGPRLEASVLSFNKELTKLYAKSVGVKTLDYTMLRKGQNSKEKLR
                     FPCIIKPARLGSSIGISIVKDEKDLEYAKDVGFEFDNDLVVEEFKNNIKEYNLAGCMI
                     NDEFVFSIIEEPKKKEFLDFEQKYLSFSGHNELIEANLSEELKEKLKDSFKKIYNPLF
                     KGALIRCDFFILDNEIYLNEINPNPGSLANYLFKDFSTTLNALADQISLEKMIKISYN
                     FLHSINGQKGKL"
     gene            17005..17220
                     /locus_tag="RJ266_000918"
     CDS             17005..17220
                     /locus_tag="RJ266_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HDV7354681.1"
                     /translation="MLSFKQDEIYTATEVVRNFSPIMEKLKKSESGKIVILKNNKFEA
                     VMLSMKEFERLQNAMQLLENIYKNQKA"
     gene            17222..17941
                     /locus_tag="RJ266_000919"
     CDS             17222..17941
                     /locus_tag="RJ266_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDV7354682.1"
                     /translation="MAQTQLSYKNKTYQISYEILGDLSLPQILILHGWGANKELMKQS
                     FCPFLKDFCQIYMDLAGFGNSSVEEILNTQDYANITELFLKQKKLNICFFMGHSFGGK
                     VSTLLAKEKDTLILLSSAGILAKKSLKVRFKIRIFKILKLFGLGKFYRYFASKDGANL
                     SPIMYETFKKVVDEDFSEIFAKQKAKSLIFWGKSDEATPLYCGEKMHQFLKNSTFYPL
                     EGDHFFFLKHSAFIAQKIKEI"
     gene            17942..19369
                     /locus_tag="RJ266_000920"
     CDS             17942..19369
                     /locus_tag="RJ266_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HDV7354683.1"
                     /translation="MLINTLYFINSLFFNFCIAFYLMSALQWYSYKFKRVFFHYHKPL
                     WHLYFLFIPYFLFLAFPLYSLAYFALIHTPILYFWNKGIDKKLVFTSKVKWFFVFVFV
                     YNAIFTILALRFSFLFNLFSLPFALLSLKIYEFFTNLYYKKQAKAKLRANENLKIILI
                     TASFGKTSIKNFLYELLKDDFKSYKTPRSVNTLLGIVADINANLSQDTQIYIAEAGAR
                     LKGDIDEITHFLQPQISIVGEIGNTHLEYFKSVENIRSTKLEALNSKRLEKAFLHSST
                     QKEEDKLISLYDDKLSLIHSSLEGLEFKVDIENKSYDFKSQILGDFNAQNLCVCILCA
                     HYLGIKLEKIQKQVLNINSVEHRLQVLSREPKFIIDDGFNGNFKGMSTSYKLCKSYKG
                     RKVLVSPGIVEVSEEENIKLAKIINECFDLAIISAQINAEIFKKELKIKTIILKEKSQ
                     LVQTLAKETKHGDLILFSNDAPSFM"
     gene            complement(19427..20239)
                     /locus_tag="RJ266_000921"
     CDS             complement(19427..20239)
                     /locus_tag="RJ266_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002860763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354684.1"
                     /translation="MAETIKQYYNLFSNALGQSFPNDKTSFSEADINSMPKGYAINGI
                     KSMDFNDPSNRMNITHLRDFSNSSITNIYQTPEQMKEAESLYIQSGSLIDGINGHSFG
                     LSLEEIKNVSKGEDWQFNPDMSVYPQNEDGSYSKEALFMSFLKSYGSGQPVESSETTL
                     NPKVEAYNRAMAKESFNGDSIALNDIMTGKVDFASLLKGYAQDGWLDADIYAMKKGVA
                     WQNTSIGYGGALFDNQFNQAKANGWKASSESINSYVGSIMDRLNNLIGQTRV"
BASE COUNT         7283 a         3439 c         2600 g         6998 t
ORIGIN      
        1 agttattttt ctaaataaat ttttaaagcc ttttcatagt cttctttggt atcaatcccc
       61 atgcttgttg ttgaaatttc aagcattttg atttttttac cattttctat agctcttaat
      121 tgctctaatt tttccgctct ttcaagtgca gaacttaata aagaacaaaa ctctcttaaa
      181 gcttttacac tataagcata aatgcctaaa tgccctttaa aactttcctc gtaattttct
      241 ctttcataag ggattttagc tcttgaaaaa tacaaagcat atccttcttt atcgcaaagc
      301 aatttaacca aattaggatc catagcttct tcttgagtga tttttttata acaactcgcc
      361 ataaaagctt ttttatccaa gcaagaactt gcaaattctt taaattttaa taaattttca
      421 cattctataa aaggctcatc agcttggaca ttgataataa tctcatcatc ttttaaagct
      481 agtttcttac aagcttcatt aatcctatcc gtaccgcttt catgattttt gcttgttaaa
      541 actgcattta aaccatattc tttagcgata cttaaaactt tttcatcatc taaagctata
      601 caaacttcat ccacactact tacccttctt gcagtagcca caaacatagg cactccacct
      661 acatcacata aaattttctc atgaaaacga cttgatttta atcttgcagg aataataatc
      721 atttttgcat ccaatctaaa atttcttttt ttatattttt gacttcaaat accttttcat
      781 cgctattttt caagtcaaat aaagccaaaa tttcatcttt aacttggaca ttaaactctt
      841 tagctataaa ttttaaatct tctttttcat tcttagaatc cctatcgtat aaagctttta
      901 tcatacttgg agtaaatttt gtccattctg ctgtagaggt aataatgcta ggttttaaag
      961 gatcaagcat tttaaaacaa gttgcggtgt gcggatcgat taaaatcttg ctttgtttga
     1021 taaattgcat acattcttca tcggtgcaaa aatccgcctc aaaatcttct tgcaaacttt
     1081 gcaattcttc tttttcaagt ttaaaatatc tctcattttt caacaaattc atcagttctt
     1141 tggttctttt atctttaaat ttcgcaaaca aaagtctttc gatattagat gaaataagta
     1201 tatccatagc tggagaaata gtcttcttaa gacttttttc acgcaaatca taaacgccat
     1261 gattaaaaaa ttcactcaaa atattattca catttgaagc gattttgatt tttgaaattt
     1321 tagctcccat ttttttagca taaaaagccc ctaaagcatt gccaaaattt ccacttggaa
     1381 caatgatttg tacttcttct aaaaactcat taaaaagttt taaactcgca taataatgat
     1441 aaataatctg aaataaaata cgcccaaaat ttacagaatt cgctacgcaa agctcataat
     1501 ttaaagctct aatttcgttt tgaaaatctt ttgaaaaaag caattctttt aaagtgcgtt
     1561 gcgctgcgtc aaaatcctca tctatagcaa aaactttcaa attatcctta tctaaagctc
     1621 gcatttgcaa ctcttgaact ccacttgtgc caccttttgg atacatacaa gctactttaa
     1681 cattttttgc attttcaaag ctttttaggg ttgcaggtcc tgtatcgccg ctcgtagcac
     1741 aaataattaa aatattttta tcctttgaaa attcgcttaa aagcacgcca aaaggctgta
     1801 aagccatatc tttaaaagct cttgtaggcc catgccaaag ctcgttaata taggtttttt
     1861 cagagatttt ttgcaaagaa ataggtgtat ttttatcatc aaagctttcg taacttttca
     1921 aagccttttt aaaaagctct tcttcgccaa aaccaaaact ttctataagc tttaaagcaa
     1981 aatctttata agacaaattg gcatattttt ctccttcaaa aataggcaaa tttaaaggtg
     2041 agtaaagccc tccttctggg gcgtttgggt taatcaaagc ttccttaaaa cttgatacat
     2101 tatttacatt tctactctcg actaatttca ttgctcaaac tccttgatat aagtttttat
     2161 tttttccctt aatgaatctt ttaattctat atttaattct ataatttgac atttaaaacc
     2221 aaaatcttta actttaacaa aatccttaaa agtaagcatt agtgtatcgc aattatgttt
     2281 ttttagcaaa ttttctaatt cttctttttt aaactcataa tgatctttaa aaaaataaca
     2341 agcccttgct ttgataaaat gttcatacaa tctaaaaggt ttagcaatag cagttaccaa
     2401 aatagccttt ggattttctt ttacaaaaga ataacgcaca aaatccctgc cttctaatgc
     2461 aataaaatca gccctttttt cataaaattt cggcaaacga taagctccac ttggtagggt
     2521 aaaattaaaa taaggtttga ttttaccttc aagtaaaata tcaaattttt taatatgaaa
     2581 tttagaaaaa gcatcatcaa gtacaacgat tttagctccc aattcaaaag ctttttcaat
     2641 accttttact ctatcttcgc tcacaatcac acctttgata ttttcttcaa aagcatactc
     2701 catagcttca tcgccacttt gtgttaaggt gcataaaatt tcattttgat ttttaacaac
     2761 aaacaaacct ttagattttc ttttatagcc cctaagtact ataaaaacgc catcaaattc
     2821 ccttgctata gctttacaaa gcggggtttt tccattacct ccaaaactta aattaccaac
     2881 gctaataaca ggttttttaa aaactatttt tttacgaaaa aaagtattta aaatcgcaaa
     2941 aaaagcataa agcacactta agggaaaaag tacaaaagca aggcattttt gccaaaaatt
     3001 gggcttaaaa aaataattat caagccaaag ttcataattt ttttcttcat tcattgttta
     3061 aatttccaaa atttcaggca tttttccctt aaaagcattt ttttgcatgc gattttttaa
     3121 catagcaatc aaagaaggat ccagtgtttt taaaagcttt tcgtcattag tttctaaagc
     3181 ttttaaacct tcatcgattt ttgcataaga aaaacccaaa tccgcttcat cgctttgatt
     3241 ttcccaaaga tccgcacttg gagctttttt gataaaattt tcatgcaagt taaggtattt
     3301 tgctaaggca taaatttcac ttttataaag cgatcctata ggattaaaag cacaagctaa
     3361 atctccataa atcgtaccat aacccaaaag taattcgctt ttattagaag tgcctatgac
     3421 taaagaattt ttcaaagcag aataatcata aagcaaactc attctaatac gagctgcaaa
     3481 atttcccaaa gatactagag tggtattttc actttgcttt ataaaagcat ctaaaatgct
     3541 ttgaatttct atgattttat attcaagatt taaatccgca caaagcctta aagcatcttc
     3601 aagattgact ttatttgaaa tttgagttgg cattaaaaga gcaaaaacat tttcttttaa
     3661 agctctttta caaagcgttg ctactaaagc agaatcaatc ccaccactaa gccccaaaac
     3721 cacaccttga ctttgagaat ttttcacttt ttcttgtata aaatcacaca ttttttccgt
     3781 aatcttttgc caatccataa agcttgcctt ttaaaaattt aatgtataat tatatttatt
     3841 taaggcaaat tttttattaa agaggcaaaa aatgcaaatt atcaaacaag cttgtggagc
     3901 ttatgagaca aattgttata ttttatttgg tgagcatgga gaaattataa ttgatcctgg
     3961 ttttgatgcg ctaaatttca tcaaaaaaca tgtaaaaaat cctttagcga ttttaaacac
     4021 tcacggacat tacgatcatg tttgggataa tgaaaaagta aaacaagcct atcaaatccc
     4081 catttatatt cataaaaatg atacttttat gcttgaagat ccttttaatc aaggttttat
     4141 gcctagcaaa gcggattatt tgattgatga tgaaaatatc atttctatag gcggacttga
     4201 ctttaaattt cactttttac caggacatac accaggttgc actatgatag aaattgtagg
     4261 taaaaatatc atgtttagtg gagatttttt attttataga agcataggaa gatgggattt
     4321 tccttattca gatgcaaatt taatgaaaca aagcttagaa aaagttatga cttacaaaga
     4381 agattttaaa cttttgccag gacatggaca agaaactacc ttaaaagaag agcaagtcca
     4441 tctaccctct tggcttagat atttttaagg tatattaaaa tggaattaga tcaaatttta
     4501 ttatatgctt ttattttttt aaatcttttt gccctttttg gtttattttt gggaaataaa
     4561 aagaaaaatc aatttaatga taaaaaattt tataaaatct gcccatgtaa aaaaatggca
     4621 gaaaatggat ctttaagtac gatttgtatt tattcagctg taggaggatt tttttacagc
     4681 gtattatcta taggttttat aggttttggt aattggactt taaattttat ttttttactt
     4741 gcattattaa gtgttttttt agggtggaaa ttaaaacttg attgaaaaat atttttaaga
     4801 aaaatccatt gatttttctt aatttttatt taaaagttgt accaccatca acgatgaaag
     4861 tatgtcctgt cacccaactt gccttacttg aacaaagaaa aagacatgct ccagccaaat
     4921 cttcaggctg ccccatgcga tttaaagggc ttaaatttat agtagcctgt tttacttctt
     4981 cataatttgt aaaagctctt aaagcatcag tttcaatagg cccaccactt acgacattta
     5041 cacggatatt tttttctcca agttcagtag ccgcatatct tgccatagct tctacagcgg
     5101 cttttgctgc accatgacct gaataatttt ctatatacac taaatttcct gtagatgaga
     5161 tagaaataat gcttccaccc cctacttttt ccatcctttt agctgcttct tgtgcgccca
     5221 caacaaaagc atttactgtg gctgtaaaaa tgttattaat tccctttggt tttaacttca
     5281 taaatttagt ataaccacct acaaccgcac gtcctgaaat gatagcattt gagataaaat
     5341 aatccactct atcaaaatcc acatcaattt tttcaaaaag ttctttataa gtttcaggtt
     5401 ctaagatatt aaactcataa gctctagctt taattttata atttttttcc aaatcttgca
     5461 ccatttcatc agcaatttgt gcattggaat tataagtaaa agctatattt gcacccactt
     5521 tagcaaattc ataaactata gctttgccta tcccgcgagt tccaccgctg attactaaag
     5581 tttttccttg aaattctgta ttcattaaaa tcctttgatc ttatattttt tcatcacttc
     5641 ttcaatttta gcaaaatttt ccttacttgg aggacaaaga ggaagtctaa actccaaact
     5701 ttctatcaat ccagctatat acatagccgt tttaatagga ataggattac tttcgcaaaa
     5761 taaaatttta ttgatattat aaagctcatc attgattttt ttagcttctt tataattttc
     5821 atctaaagca aaatgagtta aagcgctaat catatcgggt aataaatttg aagttactga
     5881 aatcactccc tttccaccat ttgaaagtat aggataattg atcgcatctt ctcccgaaat
     5941 aagcatcatt ctaggttcgt gtgcaagcaa atccacacac ttatcgatat ttccactcgc
     6001 ttcttttatt ccataaatat tttcacaatc tctaaaaagc ttgataatag tatccgttga
     6061 aatttcacaa cctgttcttc ctggaacatt atataaaagc acaggaatat ctacactttg
     6121 cgcaatagcc ttataatgct cgtaaagtcc ttgttgcgta ggtttattat aatacggtgc
     6181 cacacttaaa atcccatcag caccatgctc tttagcaaat ttagccaaac ccactgcctc
     6241 atgagttgca ttacttcccg cacctgctaa aaccttaact ttagttcctt tacaagtctc
     6301 aacggctatt tctatgcaag ttctatgttc ttcatgggtt aaagttgcac tttctcctgt
     6361 tgttcctact ggaactactg catcgatgcc attttctatt tgtcttttaa tcaatcttgc
     6421 ataactttgc tcatcaactt ttccattttt aaatggtgta ataagagccg tcatcgctcc
     6481 aatgataata tttttatcca tttgaatcct ttcttagaat taccgtagtt gaattttctt
     6541 gaataaaata ttttttagca caagaaatca aatcttttaa ttccaaattt tgtatatctt
     6601 tctcataatt taacaaagga ttgatatctc ctcttgctag atatgaacca taaatatttg
     6661 ccactgcact agcattgtta agtgagaaaa taaaatcact tttgacatta tttttcactc
     6721 tttgcaaatc tttttgagaa attttaccca ttttaagttt atcaataatt tttaaaagtt
     6781 ctttttctac tttttctgca ttaacattgg gattacaatt acaaataaaa ataaataaat
     6841 tgtcatctat acaatcatta acataagcat aataatcatt gattaaattt aatttatcaa
     6901 tcaaaatttc actcattaaa gaacttttcc cacttcctaa aagctcggat aaagcattta
     6961 aagcaggtat atctttgtgc ttgaaatttg gaattttata agcaagggct aatagttcag
     7021 tatctgagtt tttatgcaaa tatattcttt ttactccatc ttgcttaggc tcttttgtgt
     7081 gaattttagg tatagtctta gtatttttaa tcttttcaaa atgttttttt gaaagctcaa
     7141 aaacttcttt actttctata tcgccactta caagtaaaat cgcattttta ggttgataat
     7201 aaatactatg aaattcttta atatcttcaa tgctccaatt ttctatatcc ttaaaaaaac
     7261 ctataggagt ccaatgataa ggatgataca taaatgcatg attaaaaagt ctaaaataaa
     7321 gatatcccaa aggattatta tctgttctcc atctacgctc ttctaaaacc actgctcttt
     7381 caggctgaaa ttcttcatct tttaaattta aattcgccat aagttccgca aaaagctcta
     7441 aagctttatc taaatttttc ttcgcacatt taatataata atgagtatag tcaaaacctg
     7501 tgcttgcatt atccacacca ccaaaaccct taacaatctc atcaaattcg ccagctttta
     7561 aatttttagt acttttaaaa tttaaatgtt ctaacatatg agctatgcca ctttttccca
     7621 tgatctcatt tcttgaaccc actttataaa aaatatcaac gctaatcaca tcgctatttt
     7681 tatttacagg caaagcataa acttcaagct tgttttttaa ttgaattttt tcataagcaa
     7741 tcattttaaa tttaccccaa cagcttcgct aatgtgtaaa aaaccatctt ttcttaaaag
     7801 ctctataaga ttttgattga tattttttac caaagaagga cctttaaaaa tcaaagctgt
     7861 ataaacttgc accaaattag ccccattttt aatacgctca taagcaatat cagcactatc
     7921 aatccctcca cttgcaataa gcaaggtttt gccaaaaaga attttagcta cttctttgaa
     7981 aaaaatacca cttttttctg taatcaacct tccactaata ccaccaaaag tacgattatt
     8041 atctaataaa ctataatcaa cactagtatt ggctaatata aacccatctg cacctttttt
     8101 aatagcattt tcacataaat ttaaagcatc atctattttc atatcaggag caatttttat
     8161 caaaataggc ttagaagtaa tttttttggc ttcttcaagc aaggtattta aaaaatcatc
     8221 attttgtaac tctcttaaat ttttagtatt aggagatgag atattaacaa taaaataatc
     8281 acataaatcc ttaaaatctc taaacaaagt aaaataatcc tccaaggctt tatcatttgg
     8341 agtgatttta tttttcccta tatttactcc taagggtaaa acaaaaggat aagtttttgc
     8401 aagtcttaaa gcaatctttt cagcaccttc gttgttaaaa cccatagcat tttgtatact
     8461 ttcttgtttt acaagtctaa atagacgtgg tttttcattg ccttcttgag gttttggagt
     8521 aaaagttccc acttctaaaa agccaaatcc taaagcactc aaaggtctta tcatagtagc
     8581 atttttatca aagcctcctg ctaaacccac agggttatta aaatcaagtc caagtaaatt
     8641 ttgccttaaa ctctcattat caactatata tttgtgtgct aaaaaactta aagctcctgg
     8701 aaaactagca cttaaagccc ttaagctata ttcaaccaaa gcatgtgtat gctcagggtt
     8761 taacttaaaa agtaaaggtt ttatcatttc ataagccatt ttttaatcct ttttaaaatt
     8821 ctaactaaaa ttaactaaag ctaggctttg ttttttcttt gcttttaaat ttttgataca
     8881 aagaacaagt ttgcaaaagc tcttcatctt tacctattgc caataccttg cccttatcca
     8941 atactactat tttatctgca ttttctatag tgcttaaacg atgtgcaacc actaaaatca
     9001 atctatcttg ttttaaattt tctatagttt taactattgc tttttcactt tcattatcca
     9061 aagctgaagt tgcttcatca aaaataagca catcaggatt tttatataaa gctctagcga
     9121 ttgctattct ttgtttttgc cctccactta agttcttacc atgttctttc acttcagccc
     9181 aaatcccgcc catttcttta acaaattcat aagcattggc caattttaaa gcttggatga
     9241 ctttttcttc ttctaactct tcgctataag caatatttgc agcaaaacta tcattaaaaa
     9301 gataaatatt ttgcgttaca agtcctattt tagcatgtaa gctttctatg gtaaaagtgc
     9361 taatatcttc ttgattgagt aaaattttac ctttttgctt ttcataaaaa tacatcaaaa
     9421 gattaataat agaagattta ccacccccac ttgtccctac aagagcaagc atttgccctt
     9481 taacaaaatc aaaatttacg ccttttaaaa cacttttatg cgggttttca taagcaaatt
     9541 caacattttc aaagctaatt ttttcaatgt tttttaattc tttgcttcca cctttaattt
     9601 gaggttctaa atccaataaa taaaaagttc tttcacttgc cgcaacagca ccttgaagtt
     9661 ttccatataa agacgaaaga cgctttaaag gagtatatat cgcaaaaagt gccgaaacaa
     9721 aactgataaa acttcccaca ctcatagaac cattgataac ctctctaccc cctacaataa
     9781 tcaccacagc aaccccaaca gaacccatca tatccattaa aggacttgta agtgcatcaa
     9841 tacgtgcgga ttttaggttt aatttacata aagtatcatt atgcttagca aatttatcac
     9901 tttctttttt ttcattatca ttagctttga tcaattcaat atttgaaaaa atttcaccca
     9961 aataagaaag taaatccgaa tttgtttctt gtatatttct tgcatatttt ttaagttttt
    10021 tagcaaacca taccaaagga aaaatagcta aaggcaaaat cactaaagca aaaaaagcca
    10081 aagtaggact ttgatacaag actaccgcaa gcagtcctat agcagttaaa agctctctaa
    10141 aaaaatcagg aataatgttt gatactatgc tttgaagtgc attaatatca ttagtacaac
    10201 gacttacaag ctctccgctt ctatagcgtt taaaaaaatc catatccaag cgtaaaacat
    10261 tttttaaaac cctagcacgc aatactctta acatatctgt tcctataaag gaaacataaa
    10321 aactttgtaa ataagttcca agatttttaa aaaaatacat caatactagc aaaaaaggca
    10381 ctgtataaag taaagcttca tttttttcaa cgaaaatata atttaaaata ggctctaaag
    10441 tataaaaact tccagcagtt cctccgcttg ctaaaatcat accaaaaata gctatagcaa
    10501 attgcttcca atatctttta taaaagggct taaagcgtat taaaacctct tttaaattca
    10561 tctcattatg catttatttt ctcccaaatt gttccatttg gagtatctaa aagagtgatt
    10621 tttttactat ttaattgctc tcttattgca tcagctgtgt taaaatcttt gtttttctta
    10681 gcctcagttc tttctaaaat taacttttca atctcttctc gttcttcttt gcttacaccc
    10741 cattgaaaat ataaagttgt atccataaaa ccaaagccaa aaattttagc tagctcactt
    10801 aaagcttctt tgatattttg ttttaaaatt ttatttttgt tttctttatc caactctaaa
    10861 tttgcactac tgataaaatc atccaaaaga gctaaggctt tagaaatatt taaatcatca
    10921 tttaaaatct ctaaaatttg cttagcaatt tcgcttttta tttcaatatc atttaaaaca
    10981 tcaaaatcag aaatttcacc taaatccaat ctttttttaa ggcgataaaa tttatctaaa
    11041 cgttttttag cattttctaa atccgataaa gaataattaa aatgagatct ataatgagaa
    11101 ctcaaaagat aaaatcttaa agcctcgccc ataaattctt ttaaagcatc ttttataaaa
    11161 aaactattat ttaaactttt actcattttt tcgccatcga tttttacaaa accattgtga
    11221 agccaaatat ttgctaattt tctcttacat ccacaacgac attgcgcagc ttcattttca
    11281 tgatgaggaa aaagcaaatc tatccctcca gcatgtatat caagagtatt ttcaaaaata
    11341 gaatcaatca tagcaacaca ttcagtatgc caacctggac gccctttgcc aaattcactt
    11401 tcgtaaaaat tttcatcaaa tttccaaagc acaaaatcgc tttcatttct tttttgcact
    11461 tcattactta gacgagagat attttcttct aaattgcgat ttgataggct taaatatttt
    11521 tcatctttac ttgtatcaaa ataaattcca tcttctagag tataaacaaa cccatcctta
    11581 gcaagctttt taatcaaatc aagcatagct gttatataat gcgttgcacg aggtttaaaa
    11641 tcaggatcta atacatttaa aaccctcata tcctcttcat aacttttgat ataaaattcc
    11701 gtaatttcct ctaaagtttg accactttga gccatttttt tcaaaatctt atcatcaata
    11761 tctgtataat ttctagcaaa ttttacccta ttgccttgag caagtaaaac cctacgcaaa
    11821 agatcaaaac aaacactact tcttgcatgt cctaaatgtg catcatcata aaccgtaggt
    11881 ccgcataaat aaatactaat atctttttta tcaagtttta ttttctcttt tgttacacta
    11941 tctaataatc tcattaaaaa actcctttaa aacttgtaaa aattcctata aaaaaactta
    12001 aaatataagg tttaatcaaa ataagtaaga tcgtaaaaac aatcaaagca actataacca
    12061 ataagcaaat tttaatagat attaaagcaa aaaatttctt aaaaccaaat tctttgatat
    12121 tagctccaag caaataaaaa gcactaatag agcttgaaag tgctactgca ataaccttta
    12181 aactttcatc tttaatcaaa aatataaaag ccatagaaca taaagcactg ataattaaag
    12241 attttaccgc gatccaagct gctgtttttt gtttaaattt tgcataaagc cacaaagaaa
    12301 aaagcttttg caaaccaaaa ggtaaaagcc ctataagata agcaatcaaa acataagccg
    12361 taatcacact atcttcgtga gtgaaatttc ctctttcaaa taaaagcttt gaaatttcca
    12421 aagcaaacac agaacctaca atactagaag caataagcaa aatgcttaaa agcgctaatg
    12481 ctctttgcat aaattttaag gctaaatttt cttgatcact ttttaaatgt tttaaaattt
    12541 ttggaaaaga aacttgagtt agagcgatag caaaaagtgc aagggggagt tggaagacac
    12601 gatttgcata ataaagataa gaaatactcc cgctcattaa aaaactagct atagttgtat
    12661 caagcaatga gctaaattga gtcgcggaag aacctaaaac tccatgaaaa aaattgccat
    12721 aaaaaccttg taatttcgcc ttggcttttt taaattttat acttaaagcc atagcacgta
    12781 ttacaggatt gttttttaaa acaagcaaat gtaaaataag ctgtgccacc ccacttaaaa
    12841 ccgttgcata agaaaaataa taaagtgtat tttgcggtgc atttttatcc acaaaaaagg
    12901 cagctataac aatacttaag ttaaataatg ccgcagaaaa agaggtaatg aaaaattttt
    12961 gtctataatt taaaatagct cctaaaaaag taactaaaaa aataaaaaac aaataccaaa
    13021 aattaatcgc caccaaagga gccgctaaag ctatagtatc tgcgttaaac ccaaaagcaa
    13081 aaagcttggt aaaaaaagag gaaaaaaaac ttaccaaaag acaaaataaa aaaactataa
    13141 ggctaaattg catcattaca ctaacgcaaa aagctccctt ttttttcgct tttacaaaat
    13201 taggcaaaaa actttgtcca aaagctcctt ctgcaaaaat tcttctaaaa aaagcaggca
    13261 tttttaaagc cacaaaaaaa atatcactat aaagccctgc tcctaaaaaa agcgctatta
    13321 aaacatctct agcaagccct aaaattcttg aaaataaaat tcctaaagca ttgacaataa
    13381 aatttttaaa tactaaactc ttcattaaat tttttcataa atttcaaaat ataaagagaa
    13441 ttattttaac taaaattgat taaaaattga ctataattac attcttaatt ttttacaagg
    13501 ggaaagtttt ggctttggat gaaaaaatta ttgcctatac agaaaatcca gctcgagagc
    13561 ttttaagcgt agcttcacga acaaacctta gcttaaatga gcttgatttt agtttattgg
    13621 cattttctac acaatatcgt tttggagatt tagaatggga aaaaatctct gaaaaagaat
    13681 taactctttt tgataaagat gaattttttt taaaaaatga tcttcaaatc aagcaagaat
    13741 acaaaataga aattttccac ggtataaacc aaagcaaagc atctcaagca gtcaaactag
    13801 ttgcaaataa aaatttaacc aaaataattg ctcaaattga ttttacaaat ttagactttc
    13861 atgaaaaact agcactagaa cttttgcaaa atatttataa aaagatgttg aaacttaaat
    13921 ttttaatagg tatccgcatt tttgatttta agaaaaattt aatgtctttt tgcaaccaac
    13981 ataaaaacac ccctttaaat aaaactatac aaatcaccgt tgcacaaggt attgatccta
    14041 tagaaagtca agatgaatcc ctgatcttga cttataaaga aaaaaccaaa aactacacta
    14101 tcgatgaaaa acgctcaggt attattgttg ttgatgaaaa tgaagttgtt ttaaaacacg
    14161 ccaagtttaa acaaggtaaa gaaggaaaag acttaaattt acacacctta aaagttttag
    14221 ccgcaaatga aaataaagtt aaattttctt gttcttcggc ttttaaacaa gtagagcaag
    14281 atggatacac agaatatata gctttaaaaa aaggttatgt agtacaagat ggtgaaaaat
    14341 ttgatattgc caatgaacta gattttaatg gagtagattt taaaaatata gggattataa
    14401 gagctggact agacaaaaat gtcaaaatca atataaaatt tctttcagaa gtaaaagatg
    14461 ctgtaaattc tggggttggg atagaatgtg aagaattaaa tgtagtcgga agcgtaggaa
    14521 gcaacactca acttaatgcc gctaaaatga aaattgaagg cactacacat tctaaagcca
    14581 aaattcaagc caaacaagcc tatataaaaa ctcatagagg atttgtagaa gccgaaattt
    14641 taaatataga tttgctcgaa ggtggaacaa tcaaagctaa agaagtgaga attaaaaaaa
    14701 gtttaggcgg aaatatacaa gctgataaaa tctatataga aaatttagaa agtaataatt
    14761 cttgtgtgtt ttttaaaaac accacaatag aacgcattaa cggggataac aataaatttc
    14821 atgctaaaat taaaactctt gatagtaatt atgatgaaga atttgtgatt ttaggagagc
    14881 aaatttctaa gttaaatcat aaaatgaata aaataagaca atacatttta tcaagtaaaa
    14941 atggaatttt aagcgttgaa aaaaagataa cagaacttaa aaatcaaggt caaaatgttc
    15001 ctatacaata cgaaaaagcc ctaaaagatt tctctttaca aaatcttgaa ttaaataaac
    15061 tacaaaatga agaaaaagaa cttcttgaac gcaaaaaatc tttacaatta gaattaatca
    15121 atttgcaaaa aatgcttttt gaagcaactt ttataaataa aagcggcaaa tggactgaca
    15181 tgaatgagat caaattttca cttctagaac ctaaagaaga tattttttac tcttcatttg
    15241 ttaatgaaag tgctaaattt ataggtatta aaaaagtcat acaaaacaac caagaaagta
    15301 tagaaataca taaaaaatta gattatgaag aaaaggatat agcatggttg tcggcatcga
    15361 aggaataatc acaaaaaaag aacctacttt tatcattgtt aaatgtgtta gtggtttaag
    15421 ctatgggata tttatttcgc ttttttgttc tgctaaaatt caaactcaag aaaagcatga
    15481 gttttttatt actcaaatca tcaaagaaga ttctaataaa ttttatggct tcttggataa
    15541 agatgaacaa aaaatgtttg aaatgctttt aaaagtcaat ggagtgggtg caaatactgc
    15601 tatggcggta tgctctagcc ttgatgtaaa ttctttttac aaagcgttaa gtttaagcga
    15661 tgaaagcgtg cttaaaaaag tacctggtat aggtccaaaa agtgcgaaac gcattatagt
    15721 agaactttca gatacaaaaa ccaaacttga aaatgtaagc gatgataaaa gtgaagcctt
    15781 agccgcactt cttactctag gctttaaaca agaaaaaatc ataagtgttt tagcaagcgc
    15841 tcaagcaaca ggcacaagcg aactcatcaa agaagctctt aaaaaactag gataaaggaa
    15901 taaaatgaaa tttgcaatac tttttggcgg aaattcttat gaacatgaga tcagtatagt
    15961 aagtgctgta gtacttaaaa aagttatcaa tcaaaattta gaatttattt tttgtgatga
    16021 agaaagaaga ttttatcata tcccaagtga aaaaatgaat tctaaaactt ttagcactaa
    16081 agcttataaa aaagaaaaag aacttttcat acaacaagga ggttttttta gtaaaggttt
    16141 tttaaaagaa aataaactag agtgcgagtg cgtgatcaat cttatccatg gtggagatgg
    16201 agaagatgga aaaatcgcgg ctttatttga gttttattct attaaattta taggacctag
    16261 acttgaagct agcgtattat cttttaacaa agaacttact aaactttatg caaaaagcgt
    16321 tggagtaaaa acacttgatt ataccatgct aagaaaagga caaaactcta aagaaaagct
    16381 tcgttttcct tgtattataa aacctgcaag acttggaagt agtataggca ttagcatagt
    16441 aaaagatgaa aaagatttag aatacgccaa agatgtaggt tttgaatttg acaatgatct
    16501 tgtagtggaa gaatttaaaa acaatatcaa agaatacaat cttgcaggat gtatgatcaa
    16561 tgatgagttt gttttttcca tcatagaaga gccaaagaaa aaagaatttt tagactttga
    16621 acaaaaatat cttagttttt caggacacaa tgagcttata gaagcaaatt taagcgaaga
    16681 attaaaagaa aaactcaaag acagttttaa aaagatctac aatcctttgt ttaaaggtgc
    16741 tttaatacgc tgcgattttt ttatactgga taatgaaata tatttaaatg aaatcaaccc
    16801 aaaccctggt tctttggcta attatctttt taaagatttt agtaccactt taaacgcttt
    16861 agctgatcaa atttcacttg aaaaaatgat aaaaatcagc tacaacttcc ttcactctat
    16921 caacggacaa aaaggaaaat tataagcttt taagtcaaaa tacgctaaat tatacataaa
    16981 atttagcgta ttttaggaag aaaaatgctc tcttttaaac aagatgaaat ttacactgcc
    17041 accgaagtgg taagaaattt tagccccatt atggaaaaac tcaaaaaaag cgaaagtgga
    17101 aaaatagtta ttttaaaaaa taacaaattt gaagctgtaa tgcttagtat gaaggaattt
    17161 gaacgcttac aaaacgccat gcaactttta gaaaatatct acaaaaatca aaaggcttaa
    17221 aatggctcaa acacaacttt cttataaaaa caaaacttat caaatttctt atgaaatttt
    17281 aggtgatctt tccttaccgc aaatacttat cttacacggc tggggagcta ataaagaact
    17341 tatgaagcaa agtttttgtc cttttttaaa agatttttgt caaatttata tggatttagc
    17401 aggttttgga aattcaagtg tggaagaaat tttaaacact caagattatg ccaatatcac
    17461 agaacttttt ttaaaacaaa aaaaactcaa tatctgtttt ttcatggggc attcttttgg
    17521 tggaaaagta agcaccctgc tcgcaaaaga aaaagacacc ctaatcttac tttcaagtgc
    17581 aggaattttg gctaaaaaat ccctaaaagt gcgttttaaa atccgtattt ttaaaatttt
    17641 aaaactcttt ggtttgggaa aattttatcg ctattttgct agtaaagatg gagcaaatct
    17701 tagtcctata atgtatgaaa cctttaaaaa ggttgttgat gaggatttta gtgaaatttt
    17761 tgccaagcaa aaggctaaaa gcttgatttt ttggggaaaa agcgatgaag ctacgccttt
    17821 gtattgtggt gaaaaaatgc atcaattttt aaaaaatagt actttttatc ctttagaggg
    17881 ggatcatttt ttctttttaa aacactctgc tttcatagct caaaaaatca aggaaattta
    17941 aatgcttatc aatactcttt attttatcaa ttctttattt tttaattttt gtatagcttt
    18001 ttatcttatg agtgctttac aatggtattc ttataaattt aaacgcgtgt tttttcatta
    18061 tcataaacct ttgtggcatt tgtatttttt atttattcct tattttttat tcttagcttt
    18121 tcctttatac tctttggcat attttgcatt gatccatact ccgattttgt atttttggaa
    18181 taaaggcata gataaaaagc ttgtttttac aagtaaggtt aaatggtttt ttgtttttgt
    18241 ttttgtttat aatgctattt ttaccatcct tgctttgcgt ttttcttttc tttttaatct
    18301 ttttagtctt ccttttgctt tattgagtct taaaatttat gagtttttta caaatttata
    18361 ttataaaaaa caagccaaag ccaaactaag agccaatgaa aatttaaaaa tcatactcat
    18421 taccgcaagt tttggaaaaa caagtattaa aaatttttta tacgaacttt taaaagatga
    18481 ctttaaaagc tacaaaacac cacgctctgt caataccttg ctaggtatag ttgctgatat
    18541 caatgctaat ttaagtcaag atactcaaat ttacatagct gaagcaggcg ctagacttaa
    18601 aggcgatatc gatgaaatca cgcatttttt acaacctcaa atcagcatag taggagagat
    18661 aggcaataca catttagagt attttaaaag tgttgaaaat atccgctcaa ccaaacttga
    18721 agccttaaat tccaaaagac tagaaaaggc ttttttacac tctagcaccc aaaaagaaga
    18781 agataaactc atcagccttt atgatgataa attaagtctt attcattcaa gtcttgaagg
    18841 tttagaattt aaagtcgata tagaaaataa atcctatgat tttaaaagtc aaattttagg
    18901 ggattttaat gcgcaaaatc tttgtgtttg tatactttgt gctcattatc ttggcataaa
    18961 actagaaaaa attcaaaagc aagttttaaa tataaattcc gtagaacatc gcttgcaagt
    19021 gctttcaaga gagcctaaat ttatcataga tgatggtttt aatggaaatt ttaaaggtat
    19081 gagcacaagc tataaacttt gtaaaagcta taaaggacgc aaagttttag taagtcctgg
    19141 tatagtagaa gtaagcgaag aagaaaatat aaaacttgcc aaaatcatca atgagtgttt
    19201 tgatcttgct atcattagtg cacaaatcaa tgctgaaatt ttcaaaaaag agttaaaaat
    19261 aaaaaccatt atacttaaag aaaagagtca gctagttcaa actctagcta aagaaacaaa
    19321 acacggagat ttgatactct tttcaaacga tgcacctagc tttatgtgat ttgcataagt
    19381 atttgcaaat gtcatcattt ttaatttgac ttcgtgcaaa tacttcctaa accctagttt
    19441 gtcctataag attatttaat ctatccatta tagatccaac ataagaattt atactttcac
    19501 tgcttgcttt ccaaccatta gcttttgctt gattaaactg attatcaaac aaagctccac
    19561 cataacctat gcttgtattt tgccaagcaa ctcctttttt cattgcatat atatctgcat
    19621 caagccagcc atcttgtgca taacctttta acaaacttgc aaaatcaact ttgcctgtca
    19681 taatgtcatt taaagcaatg ctatcaccat taaaactttc tttagccata gccctattgt
    19741 aagcttctac ttttggatta agtgtagttt ctgaactctc aacaggttgt ccgctaccat
    19801 atgattttaa aaaactcata aataaagctt ctttagaata acttccatct tcattttgtg
    19861 gataaactga catatcagga ttaaattgcc aatcttcacc tttagaaaca tttttgattt
    19921 cttccaaaga taaaccaaaa ctatgtccat ttatgccatc tattaaagat cctgattgta
    19981 tatataaact ttcagcttct ttcatttgtt caggggtttg ataaatattt gtaatagaag
    20041 aatttgaaaa atctcttagg tgagtgatat tcattctatt gcttggatca ttaaaatcca
    20101 tcgattttat tccatttata gcatacccct taggcataga atttatatct gcttcactaa
    20161 aacttgtttt atcatttgga aaactttgac ctaaagcatt agaaaaaaga ttataatatt
    20221 gttttatggt ttcagccata tctatattag tataatactc gcttacgcct aagtattctt
    20281 ttgtacttga aacaacagga tcattttcgg cagctttttt
//
LOCUS       DAPIWB010000032        19490 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.033, whole genome shotgun sequence.
ACCESSION   DAPIWB010000032 DAPIWB010000000
VERSION     DAPIWB010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19490)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19490)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19490
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.033"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            14..1234
                     /locus_tag="RJ266_000922"
     CDS             14..1234
                     /locus_tag="RJ266_000922"
                     /inference="COORDINATES: protein motif:HMM:NF019310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7354685.1"
                     /translation="MEKSLLFHFRRIGVEFIIFSVYAVFSISWAATGSLMPLISNDLA
                     LNTQQATLITSMIVVAKIFGASFTAFLVYKFGLKKGYFLGCILMSSGIFLSFVDSYSG
                     ILIIRFLTGLGSACSLVCLVPIAQQWFEKKALHFVISFNITSNLVGITLGLVLAESIS
                     NYFGNWRDSLSFYAWINLILLILWLFVGKDENKKEEKKNNAKDLIYALKSRVTWGMII
                     FYIGPILFLNSLFTFLPTFYAQYAGFSKELADFAKKEIPALANFAIIFGPYLGLFFKR
                     KNISFKIMLLSGGACIFICGFCMLFLQNLVLIQIFAVLSGIFYSMWFPFFFNLPSELK
                     NSNPNQTAYIMSAFWSITFVILSFNLWVVSWSVDKTHSFTLGFVYIFALIFISAILAQ
                     FVLPRRENFIQGEK"
     gene            1236..2387
                     /locus_tag="RJ266_000923"
     CDS             1236..2387
                     /locus_tag="RJ266_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDV7354686.1"
                     /translation="MNLIPEILDLQGEFEKIRHQIHENPELGFDELCTAKLVAQKLKE
                     FGYEVYEEIGKTGVVGVLKKGNSDKKIGLRADIDALPLQECTNLPYKSKKENVMHACG
                     HDGHTTSLLLAAKYLASQNFNGTLNLYFQPAEEGLGGAKAMIEDGLFEKFDSDYVFGW
                     HNMPFGSDKKFYLKKGAMMASSDSYSIEVIGRGGHGSAPEKAKDPIYAASLLVVALQS
                     IVSRNVDPQNSAVVSIGAFNAGHAFNIIPDIATIKMSVRALDNETRKLTEEKIYKICK
                     GLAQANDIEIKINKNVVAPVTMNNDEAVDFASEVAKELFGEKNCEFNHRPLMASEDFG
                     FFCEMKKCAYAFLENENDIYLHNSSYVFNDKLLARAASYYAKLALKYLK"
     gene            complement(2391..3131)
                     /gene="yaaA"
                     /locus_tag="RJ266_000924"
     CDS             complement(2391..3131)
                     /gene="yaaA"
                     /locus_tag="RJ266_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HDV7354687.1"
                     /translation="MKILFSPSESKNENCVKNPINENSFIFKELFPYRMETLKHYEEF
                     IKNASLQNLQELFGIKNENEIDKFKHDLKQAPTQEAILLYTGVSYEYLNFKILDKKSQ
                     AYILENTLIFSNLFGVVRASDTLPFYKFKQGAKIGNFAIEKFYKEHFSKALDEYLENK
                     EILDLRAGFYDKFYTPKKKFYTYKFVKNGKVISHFAKAYRGILLSISAKNQVKNNKEL
                     LANLPSNLKLKEIQIKGLKEEIVLEILD"
     gene            complement(3222..4340)
                     /locus_tag="RJ266_000925"
     CDS             complement(3222..4340)
                     /locus_tag="RJ266_000925"
                     /inference="COORDINATES: protein motif:HMM:NF027978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354688.1"
                     /translation="MKKGIFLSIGIAVLFSACGNSIDEKTVKKYENQLNQTVKQEIAS
                     LSQDSGIKIEFSDFKCNADGDFIACLSPNFKTLAKDNNDEYQELFQAKNIKIRSNEIY
                     KGEANASISIKEYYNDLFKNQKSIQSNLIFEDFKLGEKVVSDINASLFQQDPKISSLI
                     NKLSSDSYTLSFDNSINKQENNYLDNLDIKFYNAKLNFNTNLNINLKEDLLNYLDSKG
                     IKFNTQTLAMDEQAINELLNIANYEQASDFSNTIQKYIILNNFKIDSTLKTEGVFSSY
                     ITTAKENLQTLKAQSQNEEQALIFDKALAILNNTTQNDDYKLNLDLKFKNIPVSDYSA
                     QGIDSIEKLSINNQDATEALKIILPFIMFSMLMGGASF"
     gene            4561..5400
                     /locus_tag="RJ266_000926"
     CDS             4561..5400
                     /locus_tag="RJ266_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV7354689.1"
                     /translation="MKKILLSVLTAFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIG
                     VFGDKPPFGYVDEKGNNQGYDVALAKRIAKELFGDESKVQFVLVEAANRVEFLKSNKV
                     DIILANFTQTPQRAEQVDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTAD
                     AYFTQNYPNIKTLKYDQNTETFAALMDKRGDALSHDNTLLFAWVKDHPDFKMGIKELG
                     NKDVIAPAVKKGDKELKEFIDNLIIKLGQEQFFHKAYDETLKAHFGDDVKADDVVIEG
                     GKI"
     gene            5442..6689
                     /locus_tag="RJ266_000927"
     CDS             5442..6689
                     /locus_tag="RJ266_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7354690.1"
                     /translation="MQKKYKNIIYASLGGILEFYDFVLFAFFLDIFAKVFFPQNDAFW
                     MQINAYIAFGAAYLARPFGSIMMAHFADRYGRKNIFYISMLLMVLPSFALAFLPSYES
                     IGIFAILILFTIRILQGLAVGTEVSGAWIYVSEFVKGRQIPLALGFISATLTIGLLLG
                     NIATLGIRSYFTPEEVQSYAWRIPFIIGGLFGILALFLRNKLSETPEFIKVQNEKKIL
                     SFPLFEALKTHKMSMLVCFLMTMVLTSGVATLMILPKYFESLLAMSKTSALWVQNFAI
                     LAVIFGALFQGFLASKWGSYRICFIFSIAFIIFGVLFSFYDENFLFYFLLACFAQGII
                     TFAPVFMTQIFKSELKFSGLSFAYNISYAILGFLTPFIVNAFYKEYLGIYLAIVGSCS
                     LLCVFLLKRVFARSKIKELSIVF"
     gene            complement(6672..7940)
                     /locus_tag="RJ266_000928"
     CDS             complement(6672..7940)
                     /locus_tag="RJ266_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HDV7354691.1"
                     /translation="MQNVIENFKQLCKIPHCSYETEQMKEFLSSYAKDKGFKVSVDKA
                     GNIHAIKGKPKICLQSHYDMVCMGDAPNLEVYEENGFLRAKNSSLGADNGIGIAIMMS
                     AMAEFENLECLFTNDEEVGLMGVNSLEHTLESKMLLNLDHESDDEIMIGCAGGVDIEA
                     SLSFNTLRKKGKIYELCAQNFKGGHSGINIIRNEKSSIKEMAKFIQENEGEIISFEGG
                     ERINSIPKHAKALVHFKNEVKSNDWIKCEFKEEGEFEICDQSKKLLSLINSFTHGVRA
                     YDENLGIVQTSINLATLRMQDKQIKFALFARSNILDGLKQVEFETLEFFKAFDFKVRS
                     FNFYPPWEGKPNALSDMVFKALKKVSPNAKVSAIHAGLECGIIEKKQELLCASIGPNI
                     HNPHSTDEHCEIASVEKISKVVFEVLKDNA"
     gene            8008..8535
                     /locus_tag="RJ266_000929"
     CDS             8008..8535
                     /locus_tag="RJ266_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HDV7354692.1"
                     /translation="MRINYKKIFNLRKLLSDPKKLFSVLIFTLVVVFIQNYIAQNSSF
                     EGKVVRIIDGDTIEVNHENKLARIRFFGIDAPELKQSFGKQSKEALSRILSGKQVEII
                     YKNKDTYGRIVAIVKLNDVDINRFLVSKGYAWADTYYSNAYTKEQENAKKNHLGLWKE
                     SSPIEPYKWRKHNKF"
     gene            8544..8717
                     /locus_tag="RJ266_000930"
     CDS             8544..8717
                     /locus_tag="RJ266_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354693.1"
                     /translation="MKKYTLMVLLALGISGCFVNERGISNRFYDDCKEYYDGSGTYHK
                     DCPKNWVDIKMTP"
     gene            complement(8718..9296)
                     /locus_tag="RJ266_000931"
     CDS             complement(8718..9296)
                     /locus_tag="RJ266_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354694.1"
                     /translation="MAKKDNFEEYAQLEEYASAEDISRVRAELLTCPELNTSLAGTII
                     EIDKNYAKSILITTSEMVADDQGLIFDAFIFAAANYVAQASINKEFSVIIGSKCFFYA
                     PLKLGDVLELEAHALFDETSKKRDVKVVGHVKEVKMFEGTIQVVSTDEHIFKLKRPPL
                     NTVKPTENQEQGAKINNPEAVAAALMASVGGK"
     gene            complement(9369..10259)
                     /gene="cmoB"
                     /locus_tag="RJ266_000932"
     CDS             complement(9369..10259)
                     /gene="cmoB"
                     /locus_tag="RJ266_000932"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HDV7354695.1"
                     /translation="MSRIKMQENLLEKQFLNHPLYAKIQELKALNLACNFSLGDSVNL
                     STNSQAKDEILAIAKELKPWRKGPFKIDDLFIDTEWQSFIKFNILKPFMNEISQKCVA
                     DIGCNNGYYMFKMLEFNPVKLIGFDPSIKYRLQFELINALAKTPIKYELLGVEDLPSY
                     DLKFDVIFCLGVIYHRSDPIKMLKDLKAGLNKNGVVFLDTMYIEDEREIALVPNKTYS
                     KIPNIYFVPSISALKNWCERAGFKEFEVLATKKTDENEQRKTEWIDSFSLENFLDPKD
                     KNLTIEGYEAPKRVYIRIKI"
     gene            complement(10358..12101)
                     /locus_tag="RJ266_000933"
                     /pseudo
     CDS             complement(10358..12101)
                     /locus_tag="RJ266_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344370.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
     gene            complement(12847..13391)
                     /locus_tag="RJ266_000934"
                     /pseudo
     CDS             complement(12847..13391)
                     /locus_tag="RJ266_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002885186.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(14608..15060)
                     /locus_tag="RJ266_000935"
                     /pseudo
     CDS             complement(14608..15060)
                     /locus_tag="RJ266_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002853533.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
     gene            complement(15486..17807)
                     /locus_tag="RJ266_000936"
                     /pseudo
     CDS             complement(15486..17807)
                     /locus_tag="RJ266_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344364.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            17949..18323
                     /locus_tag="RJ266_000937"
     CDS             17949..18323
                     /locus_tag="RJ266_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDV7354696.1"
                     /translation="MKMRVYYEDTDAGGVVYHSNYLKFCERARSEIFFNKKVDIFDAS
                     KGYFLLAKANCNFLKPAKLGDMIEIKTKILEVKNASVEILQEIYKDEILLFKMELTLA
                     FIKNEKPARMDMQLKKLFEELF"
     gene            complement(18315..19466)
                     /locus_tag="RJ266_000938"
     CDS             complement(18315..19466)
                     /locus_tag="RJ266_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354697.1"
                     /translation="MLNAKEQKLVDVKPVENFYPKLSVQECNTNCLFDLLESRLYLSF
                     LSEFADQNDQFLSNVYAKLLNSITDFEKNVQKITSVKLAIIIPEKTIKSYSNTIINSS
                     IAYLLRQRAEIKVKVFLTGTEDSDKIRAALDAAQAQGYQYAIAGFTLKGANELKNYSG
                     NMKIFIPTIHKNNIQISNQNIIFGSIDYDAQIATLLSKSNTNIAIFSDGSALSSNLNS
                     RILAQNNNARIYTIEGEKLDFSRLLRSQGGVNNASIFFNTPLIKTALASSQLRIYNIH
                     PYALLSTQINYNPTFLSLTQQGDRENFIIANSINNHDDNLVYLNEIFNQSIDYNWIAY
                     ATSIGVDYFYTEFLNKKSESLFDEKIKNSQVDYKVRLMQGKQASFEELK"
BASE COUNT         6178 a         2761 c         2998 g         7553 t
ORIGIN      
        1 aaaggatttt aatatggaaa aatcactttt atttcatttt agacgcattg gagttgaatt
       61 tatcattttt agtgtttatg ctgtttttag tatctcttgg gcagcaacag ggtctttaat
      121 gcctttgatt tcaaatgatc ttgccctaaa tactcagcaa gctactttaa tcactagtat
      181 gatagtagtt gcgaaaattt ttggtgcttc atttactgct tttttggttt ataaattcgg
      241 attaaaaaag ggatattttt taggctgtat tttaatgagt tcgggtatct ttttaagttt
      301 tgtagatagt tatagtggta ttttgattat aagattttta acagggcttg gttcagcttg
      361 ttctttagtt tgcttagtac ctattgcaca gcaatggttt gaaaaaaaag ctttgcattt
      421 tgtaattagt tttaatataa cttcaaattt agtaggcatt accctaggac ttgttttagc
      481 tgaaagcatc tcaaattatt ttggaaattg gagagattct ttatcatttt atgcttggat
      541 taatttgatt ttattgattt tgtggctttt tgtaggtaaa gatgagaata aaaaagaaga
      601 aaaaaagaat aatgcaaaag atcttattta tgctctaaaa tctcgtgtta cttggggtat
      661 gattattttt tacatagggc ctattttatt tttaaattct ctttttactt ttttaccaac
      721 tttttatgca caatatgcag gttttagtaa agaattagct gattttgcta aaaaagaaat
      781 tccagccttg gctaattttg ctattatttt tggtccttat cttggattat tttttaaaag
      841 aaaaaatatt tcttttaaaa taatgctatt gtctggagga gcgtgtattt ttatatgcgg
      901 attttgtatg ttatttttac aaaatttagt attgatacag atttttgctg tgttatcagg
      961 cattttttat tctatgtggt ttccattttt ctttaatcta ccttcagaac taaaaaattc
     1021 caatccaaat caaactgctt atattatgag tgctttttgg agtattacct ttgttatact
     1081 atcatttaac ctatgggtag tatcttggag tgttgataaa acccatagtt ttactttggg
     1141 ttttgtttat atttttgctt tgatttttat ttcagcgatc ttagcacaat ttgttttacc
     1201 tagaagagaa aattttatac aaggagaaaa atagaatgaa tttaattcca gaaatactag
     1261 acttacaagg cgaatttgaa aaaattcgtc atcaaattca tgaaaatcct gagcttggtt
     1321 ttgatgaatt atgtactgca aaattagtgg cacaaaaatt aaaagaattt ggttatgagg
     1381 tttatgaaga aataggaaaa acaggtgttg tgggggtttt aaaaaaggga aatagcgata
     1441 aaaaaatagg acttcgtgca gatatagatg ctttgccttt gcaagaatgc acaaatttgc
     1501 cttataaaag caaaaaagaa aatgtaatgc atgcttgcgg tcatgatgga catactactt
     1561 ctttattgct tgctgcaaag tatttagcaa gtcagaattt taatggcact ctaaatcttt
     1621 attttcaacc tgctgaagag ggtttgggtg gtgctaaggc aatgatagaa gatggattgt
     1681 ttgaaaaatt tgatagtgat tatgtttttg gatggcacaa tatgcctttt ggtagcgata
     1741 agaaatttta tcttaaaaaa ggtgcgatga tggcttcttc ggatagttat agcattgaag
     1801 ttattggaag aggtggtcat ggaagcgctc cagaaaaggc aaaagatcct atttatgctg
     1861 cttctttact tgttgtggct ttacaaagca tagtatctcg caatgttgat ccccaaaatt
     1921 cagcagttgt aagcatagga gcttttaatg caggacatgc ttttaatatc attccagata
     1981 ttgcaacgat taaaatgagt gttagagcat tagataatga aactagaaag ctaactgaag
     2041 aaaaaattta taaaatttgt aaaggtcttg cacaggctaa tgatatagag attaaaatca
     2101 ataaaaatgt tgttgcacca gtgactatga ataacgatga agctgtggat tttgctagtg
     2161 aggttgcaaa agaattattt ggcgaaaaaa attgtgaatt taatcatcgt cctttaatgg
     2221 caagtgagga ttttggattt ttttgcgaaa tgaaaaaatg tgcctatgct tttttagaaa
     2281 atgaaaacga catttattta cataattcta gttatgtttt taatgataag cttttagcta
     2341 gggctgcaag ttattatgcg aagctagctt taaaatactt aaaataaaaa ctaatctaga
     2401 atttcaagca caatttcttc ctttaaacct ttgatttgaa tttctttgag ttttaggttt
     2461 gaaggaaggt ttgctaaaag ctctttattg ttttttactt ggttttttgc acttatggag
     2521 agtaaaattc ccctataagc tttagcaaaa tgactgatga ctttaccatt ttttacaaat
     2581 ttataagtat aaaatttctt ttttggggtg tagaatttat cataaaatcc tgctctaagg
     2641 tcaagtattt ctttattttc taagtattca tctaaggctt tactaaaatg ttctttataa
     2701 aatttctcta tggcaaaatt tcctatttta gccccttgct tgaatttata aaagggtagg
     2761 gtatcactag ctcttacaac gccaaaaaga ttagaaaata taagagtatt ttctaaaata
     2821 taagcttgac tttttttatc taggatttta aaattaagat attcataact taccccagta
     2881 taaagcaata tagcttcttg agtgggagct tgttttaagt cgtgtttaaa tttatcaatt
     2941 tcattttcat ttttaatgcc aaaaagttct tgtaaattct gtaaacttgc gtttttgata
     3001 aattcttcat aatgctttaa agtttccatt ctataaggaa ataattcttt aaatataaat
     3061 gagttttcat tgataggatt ttttacgcaa ttttcatttt tgctttcact aggggagaat
     3121 aaaattttca ttttagcctt ttttgttaat gttatgaaac attaagagca aagaatttaa
     3181 tcttgctttt aatgtttttg aagtttttat cattttaaaa tttaaaacga cgctccgccc
     3241 attaacatag aaaacatgat aaatggaagt ataattttta acgcttctgt ggcgtcttga
     3301 ttgttgatgc ttagtttttc gatgctgtcg attccctgtg cgctatagtc actaacagga
     3361 atgtttttaa attttaaatc aagattgagt ttataatcat cattttgagt ggtattgttt
     3421 aaaatagcta aagctttatc aaagattaat gcttgttctt cattttgact ttgagctttt
     3481 aaggtttgta aattttcctt agcagttgtt atatagctac taaatacgcc ttcggtttta
     3541 agagtggaat caattttaaa attgtttaag atgatgtatt tttggattgt attgctaaaa
     3601 tctgaagctt gttcgtagtt tgctatatta agaagttcat tgatagcttg ttcatccata
     3661 gctaaagttt gagtgttaaa ttttataccc ttagaatcaa ggtaattaag caaatcttct
     3721 tttaggttta tatttaaatt tgtattgaaa tttaattttg cgttataaaa ttttatatca
     3781 agattatcta gataattgtt ttcttgtttg tttatagagt tatcaaatga taaagtataa
     3841 gaatctgagc ttaatttatt gatcaaagag ctgatttttg gatcttgttg aaataagctt
     3901 gcattgatgt cactaacaac tttttcgcca agtttaaaat cttcaaaaat caaatttgat
     3961 tgtatgcttt tttggttttt aaaaagatcg ttgtaatatt ctttaatgct aattgatgca
     4021 tttgcttcac ctttgtaaat ttcatttgag cgaattttga tattttttgc ttgaaatagt
     4081 tcttgatact catcgttatt atcttttgca agagttttga aatttggact taaacacgct
     4141 ataaaatcac catctgcatt gcatttaaaa tcagaaaatt caatctttat tccagaatcc
     4201 tgagaaaggc ttgcaatttc ttgtttaact gtttgattta gttgattttc atatttttta
     4261 actgtttttt catctataga atttccgcaa gctgaaaaca aaacagctat tccaatagag
     4321 agaaaaatac cttttttcat agttttctcc ttaaaaattt aaaaaaaaga ttatatcttt
     4381 ttttacttaa aatttaaaca atactaaaag agagtgtgtg attaattaca tttttacaca
     4441 taggaaaatc tttttagttt gtttcaaatg cattatttat aattttaagt ataattaact
     4501 ttgcaattat tatatatttt tgcaatagct caaagcttat tttttaaaga aaggaaatgt
     4561 atgaaaaaaa tacttctaag tgttttaacg gcctttgttg cagtagtatt ggctgcttgt
     4621 ggaggaaatt ctgactctaa aactttaaat tctcttgata agatcaagca aaatggagtt
     4681 gttaggattg gggtatttgg cgataaacca ccttttggtt atgtagatga aaaaggaaat
     4741 aatcaaggct atgatgtagc tttagctaaa cgcatagcaa aagaactttt tggagatgaa
     4801 agcaaggtac aatttgttct tgttgaagct gcaaataggg ttgagttttt aaaatcaaat
     4861 aaagtagata ttattttggc taattttact caaactccgc aaagagccga gcaggttgat
     4921 ttttgcttgc cttatatgaa ggtagcttta ggtgtagctg taccaaagga tagtaatata
     4981 actagcgtag aagatttaaa agataaaacc ttgcttttaa acaaaggcac aacagcggat
     5041 gcttacttta cacaaaatta tcctaatatt aaaactttaa aatatgatca aaatactgaa
     5101 acttttgccg ctttgatgga taaaagaggt gatgctttaa gtcatgataa taccttgctt
     5161 tttgcttggg tgaaagatca tcctgatttt aaaatgggta tcaaagagtt aggcaataaa
     5221 gatgttatcg caccagcagt taaaaaaggc gataaagaac ttaaagaatt tatcgataat
     5281 ttgatcatca aactaggtca agagcagttt tttcacaagg cttatgatga aactttaaaa
     5341 gctcattttg gagatgatgt taaggctgat gatgtagtga ttgaaggtgg aaaaatttaa
     5401 taaaagggct tttttgccct ttagttgatt taggataaaa tatgcaaaaa aaatacaaaa
     5461 atattattta tgcttctttg ggtggaattt tagaatttta tgattttgtg ctttttgcct
     5521 tttttttgga tatttttgct aaggtattct ttccgcaaaa tgatgctttt tggatgcaga
     5581 taaatgctta tatagccttt ggtgctgctt atttagcgcg tccttttggt tctattatga
     5641 tggcacattt tgctgataga tatggaagaa agaatatttt ttatatttct atgcttttga
     5701 tggttttgcc tagttttgct ttagcttttt tgccaagtta tgaaagtata ggtatatttg
     5761 ctattttgat tttatttact atacgcattt tgcaaggttt agccgttgga actgaggtga
     5821 gcggagcttg gatttatgtg agcgaatttg tcaaagggcg tcaaattcct ttagctcttg
     5881 gttttatttc agcgacttta accataggtt tattgctagg aaatattgcc actttaggca
     5941 taagatctta ttttacccca gaagaagttc aaagctatgc ttggagaatt ccttttatca
     6001 taggaggact ttttggaatt ttagctttat ttttaagaaa taaactcagc gaaactccag
     6061 aatttataaa agttcaaaat gaaaagaaaa ttttaagttt tccattgttt gaagctttaa
     6121 aaactcataa aatgagtatg cttgtttgtt ttttaatgac catggtttta acaagcggtg
     6181 tggcaacttt gatgatttta cctaagtatt ttgaaagtct tttagctatg agtaaaactt
     6241 ctgctttatg ggtgcaaaat tttgctattt tagcggtgat ttttggagct ttatttcaag
     6301 gttttttagc aagcaaatgg ggaagctata ggatttgttt tatttttagt atagctttta
     6361 ttatttttgg tgtgcttttt agtttttatg atgagaattt tttattttat tttttactgg
     6421 cttgttttgc acaaggtatt attactttcg cgcctgtttt tatgacgcaa atttttaaaa
     6481 gtgaactgaa atttagcggg cttagttttg cttataatat ttcttatgcg attttaggtt
     6541 ttttaacccc ttttatagtt aatgcttttt ataaagagta tttgggtatt tatcttgcta
     6601 tagtgggatc ttgttccttg ctttgcgtgt ttttgttaaa acgcgttttt gcaagaagca
     6661 agattaaaga attaagcatt gtcttttaaa acttcaaaaa caaccttaga tattttttca
     6721 actgaagcga tttcacaatg ctcatcagtt gaatgaggat tatggatatt tgggcctata
     6781 gaagcgcata aaagctcttg ttttttctct ataatgccac actcaagccc tgcatggata
     6841 gctgaaactt tggcattagg cgatactttt ttaagcgctt taaaaaccat gtcgctaagt
     6901 gcgtttggtt tgccttccca aggtggatag aaattaaaac ttcttacttt aaaatcaaaa
     6961 gccttgaaaa attctaaagt ttcaaattct acttgcttaa gtccatcaag tatattagat
     7021 cttgcaaaaa gtgcgaattt gatttgttta tcttgcattc ttaaagtagc taggttaata
     7081 cttgtttgaa ctatacctag attttcatca taagctctaa ctccatgagt aaaagaattt
     7141 ataaggctta aaagtttttt actttgatcg caaatttcaa attcaccttc ttctttaaat
     7201 tcacatttta tccagtcgtt gctctttact tcatttttaa aatgcactaa agctttagcg
     7261 tgtttaggta tagaattgat tctttctccg ccttcaaaag aaatgatttc tccttcattt
     7321 tcttgtatga atttagccat ttctttgatg gaactttttt cattgcgtat gatatttatg
     7381 cctgagtgtc cacctttaaa attttgtgca caaagctcat aaattttacc cttttttcta
     7441 agggtattaa aagacaaact tgcttctata tctactccac ctgcacagcc tatcatgatc
     7501 tcatcatcgc tttcatgatc taaatttaaa agcattttag attctaaagt gtgctcgagt
     7561 gaattcactc ccatgagtcc tacttcttca tcgtttgtaa aaagacattc taaattttca
     7621 aattcagcca tagcactcat catgatggct atacctatgc cattatctgc accaagactt
     7681 gaatttttgg ctcttaaaaa accattttct tcataaactt ctaagtttgg tgcatcgccc
     7741 atacagacca tatcataatg gctttgtaag caaatttttg gcttgccttt tatggcatgg
     7801 atatttcctg ccttatctac actcacttta aagcctttat ctttagcata agagcttaaa
     7861 aattctttca tttgttctgt ttcataactg caatgaggaa ttttgcataa ttgtttaaaa
     7921 ttttctataa cattttgcat tttatctcct ttgttttgat aaaattatgg catatttttt
     7981 aaaatttaaa ggcaaaatga ttaaaaaatg agaataaatt ataaaaaaat atttaatctg
     8041 agaaaattac taagtgatcc aaaaaaactt ttttctgtat taatcttcac tcttgtagtt
     8101 gtttttatcc agaactatat tgcccaaaat tctagttttg aaggaaaagt agttagaatt
     8161 attgatggag atactataga agttaatcat gaaaacaaac tcgctagaat aagatttttt
     8221 ggtatagatg caccagaact taaacaaagt tttggaaagc aatcaaaaga agctttaagt
     8281 agaattttaa gcggcaaaca agttgaaatt atttataaaa ataaagatac ttatggtaga
     8341 attgttgcta ttgtaaagct taatgatgtt gatattaatc gatttttggt aagcaaaggc
     8401 tatgcttggg ctgatactta ctatagtaac gcttatacca aagaacaaga aaatgctaag
     8461 aaaaatcatt taggtctttg gaaagagagt agtcctatag agccttataa atggagaaaa
     8521 cacaataaat tctaaggaaa aacatgaaaa aatatacttt aatggtgcta ttagctttag
     8581 gaatttctgg atgttttgta aatgaaagag ggatttcaaa tcgtttttat gatgattgta
     8641 aagagtatta tgatggaagc ggaacttatc ataaggattg cccaaaaaat tgggtagata
     8701 ttaaaatgac tccttgatta ttttccaccc acagaggcca ttaatgcagc tgctacggct
     8761 tctggattgt tgattttggc accttgttct tgattttctg taggtttaac agtgttaagt
     8821 ggcggacgct tgagtttaaa tatatgctca tcggtgctaa caacttgtat cgttccttca
     8881 aacattttaa cttctttaac atgtccaacc acttttacat ctcttttttt ggaggtttcg
     8941 tcaaaaagtg catgagcttc aagttctaaa acatcgccta atttaagcgg agcataaaaa
     9001 aaacactttg atccaataat cactgaaaat tctttattga tagaggcttg tgctacatag
     9061 tttgccgcag cgaaaataaa ggcatcaaaa atcaatcctt gatcatctgc taccatttcg
     9121 cttgtggtta ttaaaattga tttggcatag tttttatcaa tttcgataat ggttccagca
     9181 agtgaggtgt ttaattcagg acaagtgagt aattctgctc taacgcgaga tatatcttct
     9241 gcagatgcgt attcttcaag ttgtgcatat tcttcaaaat tatctttttt tgccatatct
     9301 aacctttaaa ttctacttat ctacttcaaa atatctaaaa ttcaatatcg acaaaaaata
     9361 aaaagaattt atattttaat gcgtatataa actcttttgg gtgcttcata gccttcaatg
     9421 gtaagatttt tatcctttgg atctaagaaa ttttccagcg aaaaagagtc tatccattct
     9481 gtttttcttt gttcgttttc atcggttttt tttgtagcca aaacttcaaa ttctttaaat
     9541 cctgctcttt cacaccagtt ttttaatgca ctaatgcttg gtacaaaata aatatttgga
     9601 attttagaat aagttttatt aggcacaaga gcgatttctc tctcatcttc tatatacatg
     9661 gtatctaaaa aaacaactcc atttttatta agtcctgctt ttaaatcttt tagcattttt
     9721 ataggatcac ttctatgata aatcacccca agacagaaaa tcacatcaaa tttcaagtca
     9781 tagcttggaa gatcttctac gcctaaaagt tcgtatttta taggagtttt agctaaagcg
     9841 ttaatgagtt caaattgcaa acggtatttg atagaaggat caaaacctat gagttttaca
     9901 ggattaaatt caagcatttt aaacatataa taaccattat tacagcctat atcagcaacg
     9961 catttttgag aaatttcgtt catgaaaggc tttagaatgt tgaatttaat aaaactttgc
    10021 cattctgtat cgatgaaaag atcgtctatt ttaaaaggac cttttctcca tggtttaagt
    10081 tcttttgcta tagctaagat ttcatctttg gcttgagaat ttgtagataa attcacgcta
    10141 tcgcctaaag aaaaattaca agcaagattg agagctttaa gttcttgaat tttagcatat
    10201 aaagggtgat ttagaaattg tttttcaagt aaattttctt gcatttttat ccttgacatt
    10261 tgcttttaat gctaaattat aacattaaaa gcttttatgg caatataaat ctcatatgca
    10321 ttaagtattt gatcaaaaat aaatttttaa aaactaaaaa atacttccca aagcttacat
    10381 aagctttaga actataatca tcatctagtt tatatttctt taaagctcta gctaaatcaa
    10441 gcttgacata aaaattccct gttttattat aaagcagttg taaaccataa gcatccatat
    10501 agtttgtttc acttgctcta tatagtttag aatcattctc ataccaagaa taacctatat
    10561 cataaaaagg agtgatataa aaatctttta aaggagtagc cattctaagt ccaaagctag
    10621 ccactacagc attatctcct tctccatctc cattattata agcccttact ccataaggat
    10681 ctcctaaaga tatagtttca ctactatcta atgtagctcc attgacaact tgttgataat
    10741 ttaaactaaa aagatgagta aaagtatcat taaagaaata agcattgtta agattgacat
    10801 tgagtttagc aaattttcca aagccatctc catctgtttt agaactcatt cctaatatag
    10861 tagttccccc atctttaaca ttaccatagc ttacattagc actataagaa aaactatcat
    10921 tactaatgcc attataaact ccttctatac caaagcttat cgtatcagag cttttatcta
    10981 tagtcatgat atttaatctt gaattactaa gctttttatg ataataactt gaagttaaat
    11041 aaaaagaatt ataagtcgta atccccaaag gatattttaa atctatacct agattttcag
    11101 aagttcctat aaagtttgca tttttataag ctcctcctaa agcatagttt cttttagaat
    11161 aacttggagt gatttttaaa ttccctaaga aagtagtata gcttatacca tagttagttt
    11221 gtgcttcatc gcttctttgc aaataagcat taagactatc tccttgatga gctatgttat
    11281 taaaactcat actagcacca cccctattgt ctgcctgatt cttttatacc gtaattatcc
    11341 tcataaaaca atacagaaac gaagctatca ctaggggtag tttctatcac tatatctgtg
    11401 tcacctggat tatctcctgc ttttaaagaa gcaagagttt gtatcccata catttcattg
    11461 actttataaa ccgcatcttc tactaattta gtagtgatga tttcaccttt atgattaggt
    11521 aatttgcttt ctatagcata atctcttaca ctagaattgt tttgaaccac atatttacct
    11581 aaaacaccta aggtgatatt gatttaaatt tgatctttta attcttgttg tgggatataa
    11641 gctgtagcag caggataacc actaacttga acataataag aaataatatt ggctatatct
    11701 tgtaagtctt gaactgaaat actttctttt ttgtaatcgt ttaaggcttc ttgtaaaact
    11761 tgctcatcta aacccagatc tttaaagttt atgtttttat tggtaatatg aaagctaaag
    11821 ctaactttac gaatttgttt ttctttagaa gtatttttta aagaaggagt gtttgaattt
    11881 ggggttttag tttttaaagt attatcatta gacaaattag gttgattttt ttgagtgttg
    11941 ttattatctt tttgagtgtt tttctttgtg ttgatggttt ttgaattatt atcatcacta
    12001 gtattagaat gatctatgat aatcactcca tcttttactt ttaaagtgtt gttgtagttt
    12061 tttaagttag catcttcttt ataaggagat tgttctaaca tttgtatggt ttttttatta
    12121 tctttagtat cgctagcata aaggcttaag atagctaaac tagatagtaa gataatgcgt
    12181 ttcatttgtg tttttccttt ttaatgattt cataagagct tgttttatag atttagtttt
    12241 taatcttttt tattttttgc tttttctgtt tttatttttt ctttcttttt atctttttat
    12301 tttttgtatt tgcttgattg attatcaatc ttttttgatt tttaatcttt aaattttgtt
    12361 ttattaattt ttaacaagat ccaaaaggct tttaaccttt tggattttat catcttgagc
    12421 aaggatttcc tgctttaaaa ttatctgata ctatacaagt attaccactt aattgagtgc
    12481 tggcttcatc tactgtaggt tctttatcat cttcatcttg ttttaaaaca cttttatcca
    12541 tttgagtaag taaagcttca gagaaaggaa gtggagcatt tgcttcagga ttgcttgtat
    12601 ctccaccttc attatttggc ttatctaaaa cagaatctaa agaagctagt ttagtatcaa
    12661 attctccttt gatgctaaaa tgattattac tttgagataa ggcttgtgtt ttataagatt
    12721 ttaaagtatc atcaaattta taagtatcaa gatatccttg tgctttagca taaagatcat
    12781 ttactttgtt tttaagtgaa ataaattctg catctttaga acttgctgca ccttgattga
    12841 ttaaagctac gtaagcattg taagcatcaa tggctttatc aagatcttct ttggtgtttt
    12901 gaaagtcatt gtagttattt acaagattgt ttacatttct tatgagtgct tgtatgtttg
    12961 tttttgcttg aaggatattt ttaatttctg ttacaccttt attttgaaga taagtatttg
    13021 taaaatcact tcctaaagct tccatgaaat taaagctttg atttagggta ttgatatcat
    13081 tgctatctat atgcacattc ataggattgt cattgacatt aatccaagaa tctacattag
    13141 catctgctaa aatactatta atgacatctt tatcaatatc atcttgagag attttattgt
    13201 tagtttcact ggtaaccagt tcttggttag catttgggtt gatatcagga acttctactg
    13261 taaaatctgt agtaaagata agatttccat ttttatcttt tttatatctt ttaatttgtc
    13321 taaaactaca tttttaaagt tttcatttgc actagcttgt tcgatataac tgtgaatatt
    13381 aattttacca tcttgacctg catcatcaaa gccagaaact agattccaaa aaccattatc
    13441 aacatattta ttagaatctg taaaatcagt attatatttg tatatatgga tgttatcggg
    13501 tttatttaat ttatttgcat taagagtaac aaacaatcca acactaccat ctgaaccatc
    13561 tgaaataatt tctgtatttt tatttaaaaa tatatagata ttggagaaag ttgtataacc
    13621 tgagatattt ctaagatatc ctataaatcc ccctgcatag gttcccaatt tactattacc
    13681 actcatattt cctatattat ttaagctaat atttataaat ttatcatcat ctccaacttc
    13741 tccagcaaat ccacctatat aatcaccacc gtcaatatta cctatattat tcaaactaat
    13801 atttgtaaaa gtaccatagg tattcccagt aaatccacct gcattataac catttgattt
    13861 tataccgcca cccttataat ctacagttaa atcttttatt acactattat tgctattatc
    13921 gtcacctata taaccaaaca accctgcatt atttatatca tttcttactg tcgtatctat
    13981 attaatatta cttaaagtat gaccattgcc attaaaattt gcataaaaaa catgactatc
    14041 atctttccct actatcatat tcacaccttg aagctcacta tttcctgcta cattgaaatt
    14101 tgcataattt tgtcctgtgc aaactccttc tgagttacaa tttgccccaa agtcaatatc
    14161 agaaatcaga tcaaaggtat ccacagattt catacctgtt ttaccttcat ttatcccctt
    14221 tgcgaaataa gcccagtctt ctacattggc tatagtggtt tttttagtca tttgaattgt
    14281 ttgtaaatag ttcgttaaac cattgtagtt ttgagcttga actctgctat caagattgtt
    14341 cgtattgttt ttataaacat ctgtagttga ttgtcctaaa gtagctgcag tttgagctga
    14401 tacgataata ctatttgcat ttttaatgct tcctacatta accttaacct tatctcctac
    14461 aaattggact ttaccattat cttggagatt gaaatttccc actccatctg cacctacatt
    14521 gcccacctca ttcccaataa ttaaaacatc attagccttg atatttccca tattaatcac
    14581 attgccttta ttggctgtaa atttaggaga gaacacagga ctttcaaagg tacttctatc
    14641 tgcaaattct tgcatcgctt tgctatctat acttgaagta gacactccaa atttatttgc
    14701 attgatagtt ccacttttgc ctataaccac accattagga ttaataagat aaacattatt
    14761 acctgtagca ttaagtaaac catctattgt agaacttttg attccataag caatgtttag
    14821 gtagttttgg ttagtttttc cttgtccaaa atttacagtt tcacccttag ctatattaaa
    14881 accaccaccc cattggataa cagaatttac tttattacct gtaatattca tggtattacc
    14941 atttacattt atagttccac ttgttccatg agtgaactta cccccacttg gtaaagcata
    15001 gctttgggag aaaagtaaag aacttacaac aattgataaa acgattttat tgtttttcat
    15061 ggtttatcct ttcttggttt ggtttagttc taagaactta tctttgtttt tcttttttct
    15121 ttttttatct gtttgtttta ttttttcttt ttaaaaacaa aaataagttc ttaatcctag
    15181 atttctctag gattattaat tgttgataac tttgatttgt tattgttttt attgtccatc
    15241 cttatttatt ttatctttgc gtaaatgctt ttaccatctt gggatattct tacttcataa
    15301 gaaagttttt gtaaattcat cttttttaat ctatctatag aacttagttt aaaatcttct
    15361 ttgttttttt gcattttttc aataaagctt tgaagttctt cttgatttaa agtattagaa
    15421 ttttcatcta taaaaccttg ctcactttgt aagattaaga tttctttatt tttaaggtag
    15481 gggtattact ctttgagggt ataaagagcc aatactccct cgctagaaat attaatagga
    15541 gcatcgtatg tgacttcaaa aaggggagtt gtgttgattt tattggatac aataagataa
    15601 taatgctcaa agttattaat aattctagct tcaactttag tatttaaaat cagtctattg
    15661 tttttactta aactgatatc tgaaggagct atagcattag aagcactata attatcttca
    15721 taatgtacta aggctcctgc taatatatct atgaaagtgt ttttaaatat attaaattcc
    15781 cacctatata aggtattatt ataagattta gcttcactta aacctgtaat ggctgaagga
    15841 gctataaaaa tagaattgtt atttttatac tcatcaagat taagattgtt tatgattaag
    15901 gtattatcat ggccattgtt tgaaagtcca gctataatac ttaaaatccc ttctctttta
    15961 tctgaagcta cacccaataa agtatcattg ataatgattt tattataagc agcttcatta
    16021 taagccataa tcaaataagc attatcagct gcattagaag aatagttttt tatatctatg
    16081 gtattatgat tggctttatc caaagctctt atgatgattt tagaaccttt atctatatta
    16141 cttgcatcag taatgctttg aacattgttg taatttatag tattataaga agcttctttg
    16201 gcttctgtta atacagttag atttctaaaa gaagcaaagt ctttaatcat tacttcattg
    16261 ttattagcac tactaggata aaagtcttgg ttattaagaa tgtttttctt agctgtataa
    16321 atgtatacag gtaaggttga catagaatta ttaatataaa ctttattata atccgcattg
    16381 ccttccaagg ttctaccagc tacaatattt aaagcatctt tatagctttg agaaagatcg
    16441 gttgtggtaa gatcgttttt aatgttaatg gtattatgat taactccttt agttgcaaag
    16501 ccaccataaa aagaatgttg gttataacct aagaagttat tagcgatttc taaaggatgt
    16561 tttaattcta tgtttaaggt attataattt acttctccat tattagaagc tcctgcatag
    16621 aagttaaaca aagcttgagc aaaaatgttc tcattgtttt tatctttttt taggttttta
    16681 atatctttta atattgatag tattatttaa ggcttgtcct tgttcggttt ttccacccca
    16741 aaaatcagca aataaaacag aattataagc taggggttgt ttatcatggt tcatatacat
    16801 atcaagatta aaaccatcta tgtctaaaag gtttttactg gcttgaaagt ttttatctgt
    16861 tccactatct atataacctg cactaatatg agcagcagct aaactagcat aagctttgct
    16921 tggaccatgg ataatcatat tagcatcttt gaaaagattt tattgttttt tacattgcct
    16981 tgataagcta aaccacctac aaggtgagtg attctttcat caaaggtatt attaccattt
    17041 ttatcttttt taggtaagga agtaaaaaac tctacactac tacctgcttc tatatttaaa
    17101 ctattatttg tagaatctcc ataagtggct atagctccga ttaaataagg agcaccattt
    17161 aaggctaaat cataagtgtt ctcaactccc atactaatat gggcatcttt ttgaagtatg
    17221 gtttggttat agcttgcatt actataatga gtaaaggtag aactcattaa gaaattcatg
    17281 cgttgattgc ttttagaatt actagggttt tttatatgag tatctttagg tttaagataa
    17341 aaaactgaac taagttctcc ttgttctaat ataagtttat tataacttgc atcagcatga
    17401 tcggtttttg ctgtgattaa aaaaggaagc actctaactg tttttatact atgaccggct
    17461 gtattaacac catgccttgc tttaaaagaa agaacttcat cttctctcat atcaggagta
    17521 agtaaataat gtttaaaatt taaatcgttt atatttgtaa tatttggttt aggattgtta
    17581 tatattaaag taatattgtt aatatattgt ttagaactct tagcataata atttatacct
    17641 tggagttttt tataagtaga attggtttta tcataaagtt cgttatcatt aaaataatgc
    17701 tctggaatat tgaaatttcg attgtctgta gtatttgctt gagtggctgc aaaagcgttg
    17761 atgcttaaga aggtaacaat agaaagttta aaacaaaatt tctctatacc ccctccccgt
    17821 gaagttaaaa agctttatta aattaagatt ggacggaatt tttaatataa actaaaaagc
    17881 gatatcaaag aatttccgtt gtataatcta atgtttttta aatgtaaaat attttttaag
    17941 gtaaagcgat gaaaatgcgt gtgtattatg aagatactga tgcgggtgga gtggtgtatc
    18001 atagtaatta tttaaaattt tgcgagagag caagaagtga aatttttttc aataaaaaag
    18061 tagatatttt tgatgcgtct aagggatatt ttttgcttgc aaaagcaaat tgcaatttct
    18121 taaaacctgc aaaacttgga gatatgatag agattaaaac aaaaatttta gaagtcaaaa
    18181 atgcttctgt ggaaatttta caagaaattt ataaagatga aattttgctt tttaaaatgg
    18241 aattaacttt agcttttatt aaaaacgaaa aaccagctag aatggatatg cagttaaaaa
    18301 agctctttga agaattattt taattcttca aagcttgctt gcttaccttg cataagacgc
    18361 actttgtaat caacttgaga atttttgatt ttctcatcaa ataaactttc gcttttttta
    18421 tttaggaatt cggtataaaa gtaatcaact cctatgctag tagcataagc aatccagtta
    18481 taatctatac tttgattaaa aatttcatta agatagacta agttatcatc gtggttattg
    18541 atagaattag caatgataaa attttctcta tctccttgtt gtgttaaact taaaaatgtt
    18601 ggattatagt tgatttgagt ggataaaagc gcataaggat gaatgttata aattcttagt
    18661 tgagaacttg ctagagctgt tttgatcaat ggagtgttaa aaaatattga ggcattatta
    18721 actccacctt gtgatcttaa aagcctgctg aaatcaagct tctcgccttc tatggtatat
    18781 attctagcat tattattttg agcaagaatt cttgaattta gattgcttga taaggcagag
    18841 ccatcgctaa atattgcgat attagtattt gatttactta aaagtgtggc aatttgagca
    18901 tcatagtcaa tacttccaaa aataatattt tgatttgaaa tttgtatgtt gtttttatgg
    18961 atagtcggta tgaaaatttt catatttcct gagtaatttt tcaactcatt agcacctttt
    19021 agggtaaatc cagctatggc atactgatat ccttgagctt gtgctgcatc aagcgcggct
    19081 cgaattttat cactatcttc tgtgccggtt aaaaaaactt ttactttgat ttcagctctt
    19141 tgtcttaaaa gataggctat gcttgaattt attatagtat ttgagtagct ttttatggtt
    19201 ttttctggga taattatcgc aagtttaaca gaagtaattt tttgaacatt tttttcaaaa
    19261 tcagtaatgg aatttaataa ttttgcataa acattagata aaaattgatc gttttggtct
    19321 gcaaattcac ttaaaaaact gagatacaat cttgactcta aaagatcaaa aagacaattt
    19381 gtgttgcatt cttgaacgct taatttagga taaaaatttt caacgggttt tacatcgact
    19441 aatttttgct cttttgcatt aagcaaaaag caagataaga aaaatattaa
//
LOCUS       DAPIWB010000033        19399 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.034, whole genome shotgun sequence.
ACCESSION   DAPIWB010000033 DAPIWB010000000
VERSION     DAPIWB010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19399)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19399)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19399
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.034"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            83..838
                     /locus_tag="RJ266_000939"
     CDS             83..838
                     /locus_tag="RJ266_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HDV7354698.1"
                     /translation="MKKILSIALVALVGLVLGACSDSKNKESNASVELKVGTAPNYKP
                     FNYKENSKLTGFDTDLVEEIAKKNGIKIVWVETNFDGLIPALKAGKIDMIASAMSATD
                     ERRQSVDFTKPYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGTLQENTAKAIKNAQ
                     VQSNKDLNIAVLALKNNKIDAIVADQDTAKGFLAENPELVSFYQETDGGEGFSFAFDK
                     NKQKNIIEIFNKGIDEAKTDGFYDTLIKKYELE"
     gene            complement(862..1500)
                     /locus_tag="RJ266_000940"
     CDS             complement(862..1500)
                     /locus_tag="RJ266_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HDV7354699.1"
                     /translation="MKLVLFDLDDTLIQGDSAKLWLKFCVEKGFLPQEYLEKIVFYQK
                     QYQEKKFDMDEFMTFFLQSVKGKNEDRISSLVDEFIKIYIKPYEKAKELIIKYQDQRC
                     IIISATAEFLVRKIASFLGVRESIAIKCERVGDKFSGKAYGIYSFKEGKVLRLKEYLG
                     KDYEKWMKDSYFFSDSINDLPLLESVSKAFVCNGDEKILKIAKERKYEILTF"
     gene            complement(1497..2486)
                     /locus_tag="RJ266_000941"
     CDS             complement(1497..2486)
                     /locus_tag="RJ266_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7354700.1"
                     /translation="MAYLKIKNFKKAYGDKIIFEDINFSAKKGEFITLLGPSGCGKST
                     LLRCIAGLSQINGGKISLNDKDLTKLSPQKRNIGMVFQNYALFPNLNVFENVAFGLKI
                     KKMDKKDIEKRVKKMLKLVELEEYAKTYPHKLSGGQMQRVALARSLVTKPDLLLLDEP
                     LSALDAKIRKHLRVQIKEIQKELELTTIFVTHDQEEALELSDTIILMNEGKIIQNSNA
                     NNLYLLPESHFVASFIGNYNILSPKELDSLGLKHDFKKDIALRPETIEISNEGLEAKI
                     KEKSLLGNIIRYRVRVQEIEFKVDTLNFSTHSTYEAGDKIALKFNLSLAKELK"
     gene            complement(2490..3269)
                     /locus_tag="RJ266_000942"
     CDS             complement(2490..3269)
                     /locus_tag="RJ266_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7354701.1"
                     /translation="MNENLSLKAKIYHYVVLFLVFLFLALPLMATFLYSISTSWGVSV
                     LPDDLTLKWYQELFHDERFLLALWHSLLVCVGSILLSVILVFPLVFVLNYYFLKLKAF
                     VNILIIMPFTVPPIVSCVGLLQLYADNIGGTAWILIFTYFTIALPFIYRALDNAISNV
                     NLNELITSNAMLGGSLMGAIFKLILPNLRNGILVAVFLSFSFLIGEFLYANILVGSAY
                     ETLQVYLYNIKNQSGHYSSALVIVYFVLIFITTFIASLIKE"
     gene            complement(3270..4109)
                     /locus_tag="RJ266_000943"
     CDS             complement(3270..4109)
                     /locus_tag="RJ266_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDV7354702.1"
                     /translation="MKEKFLAFLSILPFFIVFTFFMIAPLIWIVFNAFYVEEDEIYSL
                     ANFIHIFESKFYLQSIINSLQISFISSIFGLLIGLLASYSLFILAPSKICKFLFSLNT
                     MISNFSGVPLAFAFIIVLGSNGVVNVFLKNLGIEPFVSVYANFGVNIVYVYFQIPLAI
                     LLLLPAFKSLENSHLNACKMLGGGNFLYWLKIALPLLAPALFGVFVILFANAFGAYAT
                     IYALSSGNFNVAPVRIAALIAGDINLDPYMASALSIIITIIMLVVTFIANFLSKKYNF
                     KVL"
     gene            complement(4106..4915)
                     /locus_tag="RJ266_000944"
     CDS             complement(4106..4915)
                     /locus_tag="RJ266_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HDV7354703.1"
                     /translation="MMSKVILVVLDGLNCKSTSINMGYLNALCKENLGKFYSLECELP
                     SMSRPLYECLLTGVKPVLSGIINNKLSFSKQTSIFDLCKEQGLKAGSAAYHWVFELYN
                     KKEFIPSLHRHIEDENLTLPYGHFYYEDDYLDSHLFADGEHLRNKYNLDFTLIHSMNI
                     DDAGHKFGSHSIEYANKTKKVDVLISEYLPTWLEQGINVIITSDHGMTEGKSHGGLSE
                     DEILVPFFTFGSAFSYENAKIKQDEICGSICEILGLKHDKRYNDEILKAKK"
     gene            complement(4912..6237)
                     /locus_tag="RJ266_000945"
     CDS             complement(4912..6237)
                     /locus_tag="RJ266_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
                     /protein_id="HDV7354704.1"
                     /translation="MKKVILTSAMLCSVLFGVQEYEANLAGHIIIDSKSTVKPPKDAP
                     DFFKTYGKFANITREEKIGTFKSKGNRETDFYLPFKNQPIQGHSGIKYIPKKDVFWVI
                     SDNGLGKKYNSYDSMLYAHEFKFDFKNSKYELLKTVFFKDSDKKYPYPITTETTKERY
                     LSGADFDTESIQVINDEFYIGDEFGPYLLHFDKNGNLKEVFDVYVEGKKLISPDNPSL
                     KFSDKPDGENEKFNIKRSKGFEAMASSKDGSKLYLLLEGSIYNNNAYENEKGKEYLRI
                     IEFDVKNKKFTGKTYKYFLEDKSHSIGDFNMIDDKYGIIIERDQKEGTKDKACKEGED
                     TKHCFNNVAQFKRIYKVKLDDKTHEAQKISYIDLLNIKDRNKISKKPLVNDKFVFPFE
                     TIEGVDIVDDSHIVIENDNNFPYSSSREPNKTDDNEFILLEVKDFLKSK"
     gene            complement(6248..7294)
                     /locus_tag="RJ266_000946"
     CDS             complement(6248..7294)
                     /locus_tag="RJ266_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HDV7354705.1"
                     /translation="MSKKFFLSLGLVALLFSNSQAIDENLIKAAQAEGRVNSLAMPDT
                     WANWKDTWADLKNLYGIEHSDTDMSSAQEIAKFKAEKKNASGDIGDVGASFGEIAVKQ
                     GVAQPFKTSYWDQIPTWAKDKDGNWLLAYTGTIAFIVNKDVVKDIPKTWQDLLKGNYK
                     ITVGDVSVAAQAVSAVLAANYALGGDEKDLSPALAFFNTLAKQGRLVNNDVSIANLEK
                     GEVEVGLVWDFNGLGYRDKVGKDRYEVLIPADGSVISGYTTIINKYAKHPNTAKLARE
                     FILSDKGQINLAKGYARPIRIDHIILPDDIKAKLLPSEQYKNARAIKDQKAWEKSAKE
                     LPQLWQEKVIVDMK"
     gene            7411..8394
                     /gene="corA"
                     /locus_tag="RJ266_000947"
     CDS             7411..8394
                     /gene="corA"
                     /locus_tag="RJ266_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HDV7354706.1"
                     /translation="MLYIYIKTQNALVQRINFNLDSQELPQNILWIDLLHPSAAEIAF
                     ISSEFNLEFPTKEEREEIELSAKYWEDNATITINAHFLVRDLKNDEEDRNLIKLRTEI
                     VTFATAKNILFTIRYNEFSTFEEIQARILASPKNFEDGFDIIDKMFEVRVEKDADLLE
                     WIDKEARRLRTSVLEKKDEYSYDEMLKDISSLQELNMRVRDSLFDKRRAMTSLLKSDK
                     IDKDIKQNLTIVLKDLNSLVEFSVSQLNILDNIQTILASQINIEQNKIIKIFTVATVA
                     MMPPTLIGTVYGMNFKFMPELELHYAYPIVLGVMVISIILPLVVFKKKGWL"
     gene            8415..8957
                     /gene="mog"
                     /locus_tag="RJ266_000948"
     CDS             8415..8957
                     /gene="mog"
                     /locus_tag="RJ266_000948"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HDV7354707.1"
                     /translation="MDTINIGILTLSDRASSGIYEDKATAEIERVLNSYIKNDIIYHK
                     ELIPDDYDLIIKKLLYLADEKKCDLIVTSGGTGPALRDVTPEATEAVCDKMMPGFGEL
                     MRLESLKYVPTAILSRQSAGIRNKSFIINLPGNPKAIKECLEPVFPAIPYCIDLIEGA
                     YIEANDEVIKVFRPKKKCQN"
     gene            complement(8954..9139)
                     /locus_tag="RJ266_000949"
     CDS             complement(8954..9139)
                     /locus_tag="RJ266_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein"
                     /protein_id="HDV7354708.1"
                     /translation="MFFKKKISQKQKEKPKIPINDVILDDRLCKFKNKVQKISKDEAS
                     ASLLARQLSRLIRANKF"
     gene            9267..10454
                     /locus_tag="RJ266_000950"
     CDS             9267..10454
                     /locus_tag="RJ266_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDV7354709.1"
                     /translation="MTLIAILCLYTALLSWISYAQIRFLEREKDKQAQILSEKDYQNA
                     ADIAIENEKFKLFSNFYNLIISIAWIGFGFLYLKELLILNNTRFENTLFLLSFLIITS
                     ILNLPLSIYESFIKDKAHGFSNMTVKLFIKDTMKSLILTLIFGFLILYALLFCYDFFG
                     TFWWIAAFIFAFCIIVIINLIYPTLIAPIFNKMEKLDDENLLKKISSLMKQCGFSANG
                     VYVIDASKRDKRLNAYFGGLFKSKRVVLFDTLLKALNERELLAVLGHELGHFVHKDII
                     KALFNGAITMFLLFFVFANLPEFVYLESHLEGVNGGMFALLFILANIFSFLISPMLNA
                     LSRKNEFAADQHGAKVTSKEDMKNALIALARENKAFIKTSKIYTFFYLSHPSISDRIK
                     ALS"
     gene            10451..11266
                     /locus_tag="RJ266_000951"
     CDS             10451..11266
                     /locus_tag="RJ266_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDV7354710.1"
                     /translation="MTIKNALMEAKSSLKGYENEAVFILCEYLKKDKAWLFLNQDIKI
                     DHESYFELIRRFKSGEPFEYIFEKVDFWGLEFKIKKGVLIPRYDSEILLFQILNLCKK
                     NTFNGILEIGFGSGILSIVLAKELGLKITACDINPKALELALENAKLHKVDHLIDFKL
                     CNFKQIKENYDFIFSNPPYIKNSYPIDIWVQKEPKEALFGGEKGYEILEEIIHFSLDK
                     KVKFLACEFGYDQKEILEKILYQNNFIVDFFKDEQGYNRAFIAKFTNMRYDKK"
     gene            11279..11749
                     /locus_tag="RJ266_000952"
     CDS             11279..11749
                     /locus_tag="RJ266_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HDV7354711.1"
                     /translation="MKAVNLFLLASIIGVELILGIVVAPTIFFPQNLIGEGVLSHFQS
                     GLMMTQIFIKMGYLLIFVSVVNFLYEIYSLIKDEMKFKIKFSKFMLSLLILILSLIFV
                     FYFTNTIIELQKLGENTTKTQEFISIHNASEVVIKIILIMQVFLYFLSFKIAKK"
     gene            11788..12537
                     /gene="flaC"
                     /locus_tag="RJ266_000953"
     CDS             11788..12537
                     /gene="flaC"
                     /locus_tag="RJ266_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin C"
                     /protein_id="HDV7354712.1"
                     /translation="MMISDATIMQQNYYLNNAQKASDKALENIAAVRAISGVDSANLA
                     IADSLRSQSSTIDQGVANAYDAIGVLQIADASLTNISQSADRLNELSVKMNNAALNDS
                     QKGMLRTEATRIQESINDSFNNATYNGKNVFQTMNFVVGSGTETTNLNPLATDGLSID
                     NQDSITNFMDQLGSLRSEIGSGINAITSNINASVQNSINSKAAENNLLNNDMAKNVND
                     FNANYLKENAAAFVAAQSNMQLQSKIANLLQ"
     gene            12572..13204
                     /locus_tag="RJ266_000954"
     CDS             12572..13204
                     /locus_tag="RJ266_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HDV7354713.1"
                     /translation="MTLEQILEKTKNVRLVAASKYVDASIIEKLFDQGIVEFGENQVQ
                     ALAQKKENLDEKKLDIKWHFIGTLQSNKINLLIKQKPILWHSCNGIKIAKAMDKRLDY
                     KLNTLLEINSANENSKSGLDPNQAVEEYLQIQEECSNLNLCGVMSIGSHSQDKENIIK
                     SFETTFKIYEILQKHGAKICSMGMSNDFEIAIKCGSNLVRLGSILFKNLK"
     gene            complement(13217..16819)
                     /gene="dnaE"
                     /locus_tag="RJ266_000955"
     CDS             complement(13217..16819)
                     /gene="dnaE"
                     /locus_tag="RJ266_000955"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HDV7354714.1"
                     /translation="MSQFTHLHLHTEYSLLDGANKLKELALTLKEQGATSVAMTDHGN
                     MFGAIDFYQTMKAQGLKPIIGMEAYLHNHDELDDKSSRQRFHLCLYAKNEIGYQNLMY
                     LSSQSYIKGLYYYPRINKKLLEDYSEGLICSSACLQGEVNWHLNTYSERNVRFGAKGY
                     EAAKEAALWYKKVFKDDFYFEIMRHGIGDQRMIDDDIIRLSKELNIKIIATNDTHYTF
                     KERAAAHEVFMCIAMGKKLNDPDRMRHSVHEFYVKSPEQMSELFADIPEAIENTQEIA
                     QKCNLELNLGNPTPPNFKFTREYAKDHNIILPEETKEFSFDNDDIVFEELCKKGLEER
                     LKFIDESKHEEYKQRLEVEINIIKNMKFSGYMLIVHDFIKVAKDKGIPVGPGRGSAAG
                     SLVSYCLRITDLDPIPYSLLFERFLNPERVSMPDIDVDFCQDRRAEVIDYVIDKYGAD
                     KVAQVITFGKLLAKGVIRDVARVCDMSIQDADELAKLVPEELKITLDAAYEKEPKIKE
                     FIDRHPKGLEVWEYARALEGLNRNAGMHAAGVVISNESLWKKTPLFRQSKNDERHLVT
                     QYSKDHLEDVDLIKFDFLGLKTLTVINNAIKLIKKRYNKDIIWETIDVNDSKVYKTIQ
                     SGNTLGIFQIESGGMQSLNARLKPERFEDIIAVLALYRPGPMESGMLDDFIDRKHGLK
                     SIEYPFDSLEKVLEPTYGVIVYQEQVMQIVQIIGGFSLGGADVVRRAMGKKDPEKMKK
                     LKTDFADGAEKQGYDRAKAEDLWELIVKFAGYGFNKSHSAAYALITFQTAYLKTYYPS
                     EFMAALLTSEENNVDKIAVYIDEMKKMNIKLLPPSINKAIREFSALEQDGKDAIIYGL
                     GAIKSVGIPAVENLLEARQDREFKDINDFLGKIDPTKINRRTLESLIKAGAFDEFGFT
                     RKALFDNMENLSEASRKMAEVRKNAVSSLFGEEELTSGVQVNFIPKNEEFEVMEKLGY
                     EKEILGIYVSGHPLDRFYEQINAIDYVKSLDFESLKNNGEILSIGKIEDFKSMMSKNN
                     KRYGRIEILDYYSSFDATVFESNVEEIENIIKDENLKNNAYGFVLGFKAEGGEKPSFF
                     LKAIKDLQSLEDGEIKAIKKFGAKKDFKNKEENHFTAEPKEFEKNIIELDLTRLNREL
                     IYEIHEIARNAHNPNEKNNKKLVLKVISAGSCLLYHTDFIISDSIVEEISNKYA"
     gene            17048..17254
                     /locus_tag="RJ266_000956"
                     /pseudo
     CDS             17048..17254
                     /locus_tag="RJ266_000956"
                     /inference="COORDINATES: protein motif:HMM:TIGR02174.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SelT/SelW/SelH family protein"
     gene            complement(17267..17596)
                     /locus_tag="RJ266_000957"
     CDS             complement(17267..17596)
                     /locus_tag="RJ266_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family transcriptional regulator"
                     /protein_id="HDV7354715.1"
                     /translation="MKLYGIKNCNSVKKAMDALTQKGIVFDFMDIKKINQDILYTWLK
                     QKSFEELINTAGLTSKKLGLNKEKVKNLNEKELEKIVLENPSCIKRPIIEYEQNIYIG
                     KEYEKML"
     gene            complement(17593..18933)
                     /locus_tag="RJ266_000958"
     CDS             complement(17593..18933)
                     /locus_tag="RJ266_000958"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase class II"
                     /protein_id="HDV7354716.1"
                     /translation="MWTKNSWKNYPIKQQPIYPDQEEMNRVLARLEKLPPLVFAGEVR
                     NLQKSLARVCKKEAFLLQGGDCAESFENFGAVNIRDMFKILLQMAIVLTFAGGCPVIK
                     IGRIAGQFAKPRSSDFEELDGISLPSYRGDIINGFEFSEQARIPDPHRMLEAYYQSAT
                     TLNLLRGFAKGGLADLHEVHRWNLGFLKKSELHKQYTDISEKISQALAFMEACGINTS
                     NTPSLREVSVYTSHEALLLPYEEALTRVDSLSGEIYDCSAHMLWIGERTRALDEAHVH
                     FLSGVKNPLGVKIGPSASADDIIALANVLNPNNEEGRLNIIIRMGADKIINNLPKIFS
                     KLKSEGLNLVYSIDPMHGNTVKAGNFKTREFDKIMQEVRSFFEIAISEGVYPGGVHLE
                     MTGKDVTECTGGASNVTAQSLEDRYETQCDPRLNADQALELAFLIADLVKKARK"
     gene            complement(18957..19370)
                     /gene="uraH"
                     /locus_tag="RJ266_000959"
     CDS             complement(18957..19370)
                     /gene="uraH"
                     /locus_tag="RJ266_000959"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HDV7354717.1"
                     /translation="MFSIKKTLLILASVPMFLSATEYQLSTHVLDITSGQPAPKVKVE
                     LYKLEANQQWKKVSEEFTEENGRIGDLLPYEKAENRAFGIYKLKFFTKDYYTSHKINT
                     FYPFVEVSFELSKDQKHYHVPITLSPFGYSTYRGS"
BASE COUNT         6846 a         3261 c         2608 g         6684 t
ORIGIN      
        1 tttctaaaaa ttgatccaga cttaattaaa tataaattta aaataagtat aattttaaaa
       61 cattttatat caaaggaaaa aaatgaaaaa aatattaagc attgctctag ttgctttagt
      121 tggtttagtt ttaggtgctt gtagtgattc taaaaataaa gaatcaaatg caagtgtaga
      181 attaaaggtt ggaactgctc caaattataa accttttaat tataaagaaa actcaaaact
      241 tacaggtttt gatactgatt tggttgaaga gattgccaaa aaaaatggta ttaaaattgt
      301 ttgggttgaa accaatttcg atggattgat tcctgcttta aaagctggca aaatcgatat
      361 gattgcctca gctatgagcg caactgacga aagaagacaa agtgttgatt ttaccaaacc
      421 ttactatatg agtaaaaatc tttatcttaa gctaaaaaac aacgactctc ttcaaacgaa
      481 aaatgattta gaaggtaaaa aaataggagt tcaactagga actttacaag aaaatactgc
      541 aaaagctatc aaaaatgcac aagtacaaag caataaagat ttaaacatag ctgttttagc
      601 actaaaaaac aacaaaatcg atgctattgt agctgatcaa gatactgcta aaggtttttt
      661 agctgaaaat ccagaattgg taagcttcta ccaagaaaca gatggagggg aaggctttag
      721 ttttgctttt gataaaaata aacaaaaaaa tattattgaa atatttaaca aaggcataga
      781 tgaagcaaaa actgatggat tttatgatac tttaattaaa aaatatgaat tagaataagc
      841 gtgaattttc acgcttatag cttaaaaagt taaaatttca tattttctct cttttgcaat
      901 ttttaaaatt ttttcatcac cattacatac aaaggctttg ctaacagact ctagtaaagg
      961 taaatcattg atagaatcac taaaaaaata agaatctttc atccattttt cataatcttt
     1021 acccaaatat tccttaagtc ttaaaacctt gccttcctta aagctataaa tcccataagc
     1081 ttttccacta aatttatcac ccacacgctc gcattttatg gctatgcttt ctctcactcc
     1141 caaaaaagag gcgatttttc taactaaaaa ttcagccgta gctgaaatta taatacacct
     1201 ttgatcttga tatttgatta taagttcttt agctttttca taaggtttta tataaatttt
     1261 tataaattca tctaccaaag atgaaattct atcttcattt ttacccttaa cactttgaag
     1321 aaaaaaagtc ataaattcat ccatatcaaa ctttttttct tgatattgtt tttgataaaa
     1381 aacgattttt tctaaatatt cttgaggtaa aaaacctttt tcaacacaaa atttaagcca
     1441 aagtttagca ctatcgcctt gtattaaagt atcatctaaa tcaaataaaa caagcttcat
     1501 tttaactctt ttgctaaaga aagattgaat tttaaagcga ttttatcacc tgcttcataa
     1561 gtactatgag tgctaaaatt taaagtatct accttaaatt caatttcttg cactctaacc
     1621 ctatagcgta tgatattgcc tagcaatgat ttttctttga ttttagcctc taagccttcg
     1681 ttagaaattt ctatggtttc aggacgcaag gctatatctt ttttaaaatc gtgttttaaa
     1741 cccaagctat caagctcttt agggcttaaa atattgtaat ttcctataaa gctagccaca
     1801 aaatgagatt ctggcaaaag ataaagatta tttgcgttgg aattttgtat gattttaccc
     1861 tcattcatta aaataatcgt atcggataac tctaaagctt cttcttgatc gtgcgttaca
     1921 aaaatagtgg tgagttcaag ttctttttga atttctttaa tttgcaccct taaatgctta
     1981 cgaattttag catcaagtgc cgataaaggc tcatcaagta aaagtaaatc aggtttagtc
     2041 accaaagatc ttgctaaagc cactctttgc atttgtccgc ctgaaagctt atgtggataa
     2101 gttttagcgt attcttcaag ctcgacgagt tttaacattt ttttcactct tttttctatg
     2161 tcctttttat ccattttttt gatctttaaa ccaaaagcta cattttcaaa aacgttaaga
     2221 tttggaaaaa gagcgtaatt ttgaaaaacc atacctatat ttcttttttg aggacttaat
     2281 ttggtaagat ctttatcatt taaagaaatt tttcctccat taatttggct aagccctgct
     2341 atacacctta aaagagtgga ttttccacag ccacttgggc ctaaaagggt tataaactca
     2401 ccctttttag cactaaaatt aatatcttca aaaataattt tatccccata agctttttta
     2461 aaatttttaa tctttaaata agccattttt cactccttaa tcaaactagc tataaaagtt
     2521 gttataaaaa ttaatacaaa ataaactatt accaaagcac tagaataatg cccactttga
     2581 tttttgatat tataaagata aacttgtaaa gtctcataag cacttcctac aagaatattt
     2641 gcgtataaaa attcacctat taaaaaagaa aaacttaaaa aaactgccac caaaattcca
     2701 tttcttaagt taggcaagat aagtttaaaa atcgctccca ttaaagaacc tccaagcata
     2761 gcattagatg tgatgagttc atttaaattg acattagata tagcattatc taaagcccta
     2821 tatataaaag gtaaagctat agtaaaataa gtaaaaatga gtatccaagc tgtgcctcct
     2881 atattgtcag cataaagttg caaaagccct acacagctaa ctataggagg tacagtaaaa
     2941 ggcatgataa taagtatatt tacaaaggct tttaatttta aaaaataata atttaacaca
     3001 aaaaccaaag ggaaaacaag aatcacagaa agtaaaatac tgcccacaca aacaagcaaa
     3061 gaatgccaaa gagcaagtaa aaatctttcg tcatgaaaaa gttcttgata ccatttaagc
     3121 gtaagatcat caggcaaaac acttacaccc caagaagtgg aaatagaata taaaaaagta
     3181 gccattaaag gcaaagctaa aaataaaaaa accaaaaaca aaactacata atgataaatt
     3241 ttagctttta aactcaaatt ttcattcatt taaagcacct taaaattata ttttttagaa
     3301 aggaaattgg ctataaaggt aacaacaagc atgataatag ttataatgat gcttaaagca
     3361 ctagccatat aaggatcaag attgatatcg cctgcgatta aagcagcgat tcttacagga
     3421 gcgacattaa aatttcccga acttaaagca taaatagtcg cataagctcc aaaagcattg
     3481 gcaaataaaa tcacaaaaac accaaacaaa gcaggagcga gcaaaggcaa agctattttt
     3541 aaccaatata aaaaattgcc tccacctaac attttacaag catttaaatg tgaattttca
     3601 agacttttaa aagctggaag caaaagcaag attgccaaag gaatttgaaa atacacataa
     3661 acaatattta ctccgaaatt agcataaaca ctaacaaaag gctctatgcc taaatttttc
     3721 aaaaacacat taactacacc attgcttcca agaactataa tgaaagcaaa agctaaagga
     3781 actcctgaaa aattacttat catagtattt aaagaaaaaa gaaatttaca tatttttgat
     3841 ggagctaaaa taaataaaga atagctcgcc aaaagcccta ttaaaagtcc aaaaatacta
     3901 gaaataaaac tgatttgtaa agaatttata atgctttgta gatagaattt ggactcaaaa
     3961 atatgtataa aattggctaa agaataaatt tcatcctctt ctacataaaa agcattaaaa
     4021 acaatccaaa tcaaaggtgc tatcataaaa aaagtaaaaa ctataaaaaa aggtaaaata
     4081 cttaaaaagg ctagaaattt ttctttcatt ttttggcctt taaaatttca tcattatatc
     4141 tcttatcgtg tttaagtcct aaaatttcac agatactgcc acaaatttca tcctgtttta
     4201 tcttggcatt ttcatacgaa aaagcactac caaaagtgaa aaaaggcact aaaatttcat
     4261 cttcgcttaa gcctccatga cttttaccct ctgtcatacc atgatcgctt gtgatgatta
     4321 cattaatacc ttgttctaac caagtgggca aatactcaga aatcaaaaca tcaacttttt
     4381 tggttttatt agcatactca atagagtgtg agccaaattt atgtcctgca tcatctatat
     4441 tcatagaatg tataagagta aaatctaaat tatatttgtt tcttaaatgc tccccatctg
     4501 caaataaatg agaatctaaa taatcatctt cataataaaa atgtccataa ggcaaagtta
     4561 aattttcatc ttctatatgg cgatgtaaag aaggaataaa ttctttttta ttataaagct
     4621 caaaaaccca atgataagcc gcacttccag cttttaagcc ttgttctttg caaaggtcaa
     4681 aaatgcttgt ttgttttgaa aaactcaatt tattattaat tatcccactt aaaacaggct
     4741 ttacgcctgt taataagcac tcgtataaag gacgagacat actaggaagt tcgcattcta
     4801 aagaataaaa tttgcccaaa ttctctttgc aaagcgcatt taaatatccc atatttatac
     4861 tagtgctttt acaatttaag ccatcaagca caactaaaat aactttggac atcatttact
     4921 ctttaaaaaa tcttttactt caagcaaaat aaactcatta tcatcagtct tattaggttc
     4981 tctacttgaa gaataaggaa agttattgtc attttctata actatatgag agtcatctac
     5041 tatatccaca ccttctatgg tttcaaaagg aaaaacaaat ttatcattta ccaaaggctt
     5101 tttagaaatt ttatttctat ccttaatatt taaaagatct atataagaaa ttttttgagc
     5161 ttcatgagtt ttatcatcta atttaacctt ataaattctt ttaaattgag ctacattatt
     5221 aaaacaatgc ttagtatctt caccttcttt gcaagcctta tctttagtgc cttctttttg
     5281 atctctttct atgatgatgc cgtatttatc atctatcata ttaaaatcac ctatggaatg
     5341 gcttttatct tctaagaaat atttataagt ttttccagtg aattttttat tttttacatc
     5401 aaattctatg attcttagat attctttacc tttttcattc tcataagcgt tgttattata
     5461 aatgcttcct tctaaaagca aataaagttt agaaccatct ttagagcttg ccatagcttc
     5521 aaagccttta gaacgcttga tattaaattt ctcattttct ccatcaggct tatcgctaaa
     5581 ttttaaactt ggattatcag gagaaataag ttttttaccc tccacataca catcaaaaac
     5641 ttctttcaaa ttcccattct tatcaaaatg aagcaaataa ggaccaaatt catcacctat
     5701 ataaaattca tcattgataa cctgtatact ctcagtatca aaatcagccc cacttaaata
     5761 cctttctttg gttgtttcgg tggttatagg ataggggtat tttttatcac tatctttaaa
     5821 aaaaactgtt tttaaaagtt cgtattttga gtttttaaaa tcaaatttaa actcgtgagc
     5881 ataaagcata gaatcataag aattatactt tttacccaag ccattatcgc taattaccca
     5941 aaaaacatct ttttttggaa tatattttat cccactatgt ccttgtatag gttgattttt
     6001 aaaaggtaaa taaaaatctg tttccctgtt tcccttagat ttaaaagttc caattttttc
     6061 ttctctagtg atatttgcaa atttcccata agttttaaaa aaatcaggag catccttagg
     6121 aggttttact gtacttttag aatctatgat aatatgccct gctaaattgg cctcatactc
     6181 ttgaactcca aataaaacac tgcaaagcat agcacttgtt aaaataacct ttttcatcca
     6241 atctccttta tttcatatcc actataactt tttcttgcca aagttgtggt aattctttag
     6301 cgcttttttc ccaagctttt tgatctttga ttgctcttgc atttttgtat tgctcacttg
     6361 gtaaaagttt ggcttttata tcatctggca agataatatg atcaattctt attggccttg
     6421 cataaccttt tgctagattg atttgtcctt tatcagaaag tataaactca cgggctaatt
     6481 tagccgtatt tggatgtttt gcgtatttat tgataatagt tgtataaccc gaaataacac
     6541 taccatcagc agggattaaa acttcataac gatctttgcc cactttatct ctatagccta
     6601 aaccattaaa atcccaaact aaacccactt caacttcacc tttttcaaga ttggctatac
     6661 ttacatcatt atttacaagt cttccttgtt tggctaaagt attaaaaaaa gctaaagcag
     6721 gacttaaatc tttttcatcc ccgcctaagg cataattagc tgctaaaact gcactcacag
     6781 cttgagctgc tacacttaca tcacccacgg taattttata atttccctta agcaaatctt
     6841 gccaagtttt aggtatatct tttactacat ctttattgac tataaaagct atggttcctg
     6901 tataagctaa aagccaattt ccatctttat ctttagccca agttggaatt tgatcccagt
     6961 agcttgtctt aaaaggctga gctactcctt gtttaactgc tatctctcca aaagaagctc
     7021 ctacatcccc tatatcaccg cttgcatttt tcttttcggc tttaaattta gcaatttctt
     7081 gagctgaact catatctgta tcgctatgtt ctatgccata aagattttta agatctgccc
     7141 aagtatcctt ccaatttgcc caagtatcag gcatagctaa agaatttacc ctaccttctg
     7201 cttgcgcagc tttaatcaaa ttctcatcaa tagcttgtga atttgaaaac aataaggcaa
     7261 caagacctaa acttaagaaa aatttcttac tcattttttt cctttcaaaa aatattttga
     7321 aaatttaatg agttttagaa acattttaga aacaagttaa tttttaagca aacaaggtta
     7381 taattttaaa gtcataaaca aggagcgatc atgctttata tttatatcaa aactcaaaat
     7441 gctttagttc aaagaatcaa ttttaatctc gatagtcaag aactaccaca aaatatttta
     7501 tggattgatt tacttcatcc aagtgcagca gaaattgctt ttatatcaag tgaatttaat
     7561 cttgagtttc ctacaaaaga agaaagggaa gaaatagagc ttagcgcaaa atattgggaa
     7621 gataatgcga caataaccat caatgctcat tttttagtaa gagatcttaa aaatgatgaa
     7681 gaggatagga atttaatcaa gcttcgcaca gaaattgtta cttttgctac cgctaaaaat
     7741 atcttattta ctataagata taacgaattt agcacttttg aagaaattca agcaaggatt
     7801 ttagctagtc caaagaattt tgaagatggt tttgatatta ttgataaaat gtttgaagtg
     7861 cgcgttgaaa aagatgcgga tttactagaa tggatagata aagaagcaag acgcttaaga
     7921 acaagtgttt tagaaaaaaa agatgaatat agttatgatg aaatgctaaa ggatatttca
     7981 agtttgcaag agcttaatat gcgcgtaaga gattctttgt ttgataagcg tcgcgctatg
     8041 acttctttgc taaaaagcga taaaatcgat aaagatataa aacaaaatct cactatagtt
     8101 ttaaaagact taaattcttt ggttgaattt agcgtttcgc aacttaatat cttagataat
     8161 atccaaacca ttttagccag ccaaatcaac atagaacaaa acaaaatcat taaaattttc
     8221 accgttgcaa ctgttgccat gatgccacct actttaatag gaactgttta tggtatgaat
     8281 tttaaattca tgcccgaact tgaacttcac tatgcttatc ccatagtgct tggcgtgatg
     8341 gtaatttcta tcattttacc tttggttgtt ttcaagaaaa aaggatggtt ataaaaattt
     8401 attaaggaga aacaatggat acaataaaca taggaatttt aaccctaagc gatagagcaa
     8461 gtagtggcat atacgaagat aaagccactg ctgaaattga aagagtgtta aattcatata
     8521 taaaaaatga tattatttat cataaagaat taatccctga tgattatgat ttgatcatta
     8581 aaaaattact ttatctagca gatgaaaaaa aatgcgattt gattgttaca agcggaggta
     8641 caggtccagc acttcgtgat gtaaccccag aagccacgga agccgtgtgt gataaaatga
     8701 tgccaggttt tggagaactt atgcgcttag aaagtttaaa atatgtccca acggctatac
     8761 tttcaagaca gagtgcagga attcgcaata aatcttttat cattaattta ccaggaaatc
     8821 ctaaggctat aaaagaatgc ctagagcctg tttttccggc tataccttac tgtatcgatt
     8881 tgatagaagg tgcttatata gaagcaaatg atgaagttat taaggttttt cgccctaaga
     8941 aaaaatgtca aaattaaaat ttattagctc tgataagtct gcttaattgt ctagcaagca
     9001 gacttgccga agcttcatct ttgcttatct tttgcacttt atttttaaac ttacaaagtc
     9061 tgtcatctaa aatcacatca ttgattggaa ttttaggctt ttctttttgt ttttgtgaaa
     9121 tctttttctt aaaaaacatt ctttaatcct ttttttataa atatacacca acttagttga
     9181 aaagaatatt attttagatt ttaaactatt aactttattt cattatttta agctagaatt
     9241 cgcaaaaaac caatcaagga aaaataatga ctttaattgc aattttatgt ctttacacag
     9301 cacttttatc ttggatttcc tatgctcaaa ttcgtttctt agaaagagaa aaagacaaac
     9361 aagctcaaat tttaagcgaa aaagactatc aaaatgcagc agatattgcc atcgaaaatg
     9421 aaaaatttaa actattttcc aatttttata atttaatcat cagtattgca tggataggtt
     9481 ttggattttt ataccttaaa gaattactca tcttaaacaa cactcgtttt gaaaatactt
     9541 tatttttatt atctttttta ataatcacaa gtattttaaa tctaccttta agtatttatg
     9601 aaagttttat caaagataaa gcccatggtt tttcaaatat gactgtaaaa ctttttatca
     9661 aagatactat gaaaagtctt attttaactt taatatttgg atttttaatc ctttatgctt
     9721 tgcttttttg ctatgatttt tttggaactt tttggtggat tgcagccttt atttttgcct
     9781 tttgtattat agtgattata aatctcatct accctacctt aatagcacct atttttaata
     9841 aaatggaaaa actagacgat gaaaatttac tgaaaaaaat cagctcttta atgaaacaat
     9901 gtgggtttag tgcaaatggg gtttatgtta ttgatgcaag caaaagagat aagcgtttaa
     9961 atgcttattt tggtggactt tttaaaagca aaagagtggt gctttttgat acattattaa
    10021 aagccttaaa tgaaagagaa cttttagctg ttttaggaca cgagcttgga cattttgttc
    10081 ataaggatat tatcaaagct ttatttaacg gcgctataac tatgttttta cttttttttg
    10141 tttttgcaaa tttacctgaa tttgtttact tagaaagtca tctagaagga gtaaatggtg
    10201 gcatgtttgc tcttttgttt atcttggcga atatttttag ctttttaatc tctcctatgc
    10261 ttaatgcctt aagtagaaaa aatgaatttg cagctgatca acatggagct aaagttacaa
    10321 gcaaagaaga tatgaaaaat gcattgatag ctctagcaag agaaaataaa gcttttatca
    10381 aaacaagtaa aatatataca tttttttatc tcagccatcc aagtattagt gatagaatca
    10441 aggctctttc ttgactataa aaaatgctct tatggaagct aaatctagct taaaaggtta
    10501 tgaaaatgaa gcagtattta tactttgcga atatctaaaa aaagataaag cttggttatt
    10561 tttaaaccaa gatataaaaa tagatcatga atcttatttt gagcttataa ggcgttttaa
    10621 atctggagaa ccttttgaat atatatttga aaaagtggat ttttggggct tagaatttaa
    10681 gataaaaaaa ggcgttctaa tccctcgcta cgatagtgaa attttacttt ttcaaatttt
    10741 aaatttatgc aaaaaaaata cttttaatgg gattttagaa ataggatttg gaagcggaat
    10801 tttaagcatt gttttagcca aagaacttgg gttaaaaatc acagcctgtg atatcaatcc
    10861 caaagcctta gaattagctt tagagaatgc caaattacac aaagtcgatc acttgattga
    10921 ctttaaactt tgtaatttta agcaaattaa agaaaattat gattttattt tttcaaatcc
    10981 accttatatt aaaaattcat atcctataga tatttgggtg caaaaagaac ccaaagaggc
    11041 tttatttggc ggagaaaaag gatatgaaat tctagaagaa atcatacatt tttcccttga
    11101 taaaaaagtt aaatttttag cttgcgaatt tggctatgat caaaaagaaa ttttggaaaa
    11161 aattttatat caaaataatt tcattgttga ttttttcaaa gatgaacaag gttataatcg
    11221 tgcttttata gctaaattta caaatatgcg ttatgataaa aaataaaagg agaaactctt
    11281 gaaagctgtt aatttatttt tacttgcctc catcataggg gttgaactca tactaggaat
    11341 agttgttgca ccaacaattt tttttcctca aaatcttata ggagaaggag tgttgagcca
    11401 ttttcaaagt ggcttaatga tgacgcaaat ttttattaaa atgggatatt tgctgatttt
    11461 tgtttcagtg gttaattttt tatatgaaat ttattctctt ataaaagatg aaatgaaatt
    11521 taaaataaaa ttttcaaaat ttatgctgag tttgcttatt ttgattttaa gcttaatatt
    11581 tgttttttat tttactaata ccataattga actccaaaaa ttaggcgaaa acactacaaa
    11641 aactcaagaa tttatcagca tccataatgc aagtgaagtg gtgattaaaa tcatcttgat
    11701 aatgcaagtt tttttatatt tcttaagctt taaaatagca aaaaaatgat aaaatattaa
    11761 ataaatccaa aagagaagga gtaggccatg atgatctctg atgcaactat aatgcaacaa
    11821 aattattatt taaataatgc acaaaaagct agcgataaag ctttagaaaa tattgcagct
    11881 gttcgcgcaa taagtggagt tgatagtgct aatttagcta ttgctgattc tttaagatct
    11941 caatcaagca ctatagatca aggtgtcgca aatgcttatg atgctatagg ggttttacaa
    12001 attgcagatg ctagccttac caatatctct caaagcgcag atagacttaa tgaactttca
    12061 gtaaaaatga acaatgctgc acttaatgat tctcaaaaag gaatgctaag aacagaagca
    12121 acacgcatac aagaatccat caatgattct tttaataatg caacttataa tggaaaaaat
    12181 gtctttcaaa ctatgaattt tgtagtaggt agcggaactg aaactacaaa tttaaatcca
    12241 ttagcaacag atggattaag catagataat caagatagta ttacaaattt tatggatcaa
    12301 cttggaagtt taagaagtga aataggctca ggtatcaatg ccatcacatc aaatattaat
    12361 gcaagtgttc aaaatagtat caactcaaaa gcagctgaaa ataatttact aaataatgac
    12421 atggcaaaaa atgtcaatga ttttaatgcc aattatctaa aagaaaatgc tgctgctttt
    12481 gttgctgcgc aatccaacat gcagcttcaa agcaaaattg ctaatttatt acaataaaat
    12541 aagccctaaa tagggcttat tttttatcaa aatgacttta gagcaaattt tagaaaaaac
    12601 caaaaacgtt cgtcttgtag ccgcaagcaa gtatgtcgat gcaagtataa ttgaaaagct
    12661 ttttgatcaa ggtatagtag aatttggaga aaatcaagtc caagctctag cacaaaaaaa
    12721 agaaaatctt gatgaaaaaa aactagacat aaagtggcat tttataggaa cgctacaaag
    12781 caacaaaatc aatctcttaa tcaaacaaaa acctatatta tggcactctt gcaatggtat
    12841 taaaatagct aaagctatgg acaaaagact tgattataaa ttaaatactt tattagaaat
    12901 caatagtgca aatgaaaata gcaaaagcgg tctagatcca aatcaagccg tagaagaata
    12961 tttacaaata caagaagaat gctctaattt aaatctttgt ggcgtaatga gcataggatc
    13021 acacagccaa gataaagaaa atattataaa aagctttgaa actacattta aaatttatga
    13081 aattcttcaa aaacatgggg ctaagatttg ctctatgggg atgagtaatg attttgaaat
    13141 tgctataaaa tgcggatcca acttggtaag actcggaagc attttattta aaaatcttaa
    13201 gtaaaacaaa tcttacttaa gcatatttat tagaaatttc ctctactata ctatcagaga
    13261 taataaaatc tgtatgataa agcaagcaag atcccgcact aataactttt aaaacaagtt
    13321 ttttattatt tttttcatta ggattatgtg catttctagc aatttcatga atttcataga
    13381 ttaattctct attcaatctt gtcaaatcta gctctatgat atttttttca aattccttag
    13441 gttctgcggt aaaatgattt tcttctttat ttttaaaatc tttttttgct ccaaattttt
    13501 ttatagcttt aatctcgcca tcttcaagac tttgcaaatc tttaattgct tttaaaaaaa
    13561 agctgggctt ctcccctcct tcagctttaa atcccaatac aaaaccatag gcattatttt
    13621 ttaaattttc atctttgatg atgttttcta tttcttctac attgctttca aatacagtag
    13681 catcaaacga agaataataa tccaaaattt caattctacc ataacgctta ttatttttac
    13741 tcatcatgga tttgaagtct tcaattttac ctatacttaa aatttctcca ttgtttttta
    13801 aactttcaaa atctaaactt ttaacataat ctatggcatt aatttgttca taaaatcgat
    13861 ctaaaggatg gcctgaaaca taaattccta aaatttcttt ttcatatcct aatttttcca
    13921 tcacttcaaa ttcttcattt ttgggaataa aatttacttg aacacctgaa gttaattcct
    13981 cttcaccaaa aagagaactt acagcatttt ttcttacttc agccatttta cgcgatgctt
    14041 cgctaagatt ttccatatta tcaaacaaag cttttctagt aaaaccaaac tcatcaaaag
    14101 cccctgcctt aataagactt tctaatgttc tacggtttat tttggtggga tctatcttac
    14161 ctaagaaatc attaatatcc ttaaattctc tatcttgtct tgcttcaagt aaattttcaa
    14221 ctgcaggaat acccacactt tttatagccc caagtccgta tataatagca tccttgccat
    14281 cttgctctaa agcactaaat tcacggatcg ctttgttaat cgatggaggt aaaagtttaa
    14341 tattcatttt tttcatctca tcaatataaa cagcaatttt atccacattg ttttcttcgc
    14401 ttgttaaaag cgctgccata aattcactag gataataagt ttttaaataa gctgtttgaa
    14461 aagtaatcaa tgcataagcc gcagagtgag atttattaaa accatatcct gcaaatttta
    14521 cgataagctc ccataaatcc tcagcttttg ctctatcata tccttgtttt tctgctccat
    14581 ctgcaaaatc agttttaagc tttttcatct tctcaggatc ttttttaccc atagcacgac
    14641 gcactacatc agcacctcct aaagaaaagc cacctataat ttgaacaatt tgcataacct
    14701 gttcttgata aacaataacc ccataagtag gctctaaaac cttttctaaa ctgtcaaaag
    14761 gatattctat actttttaaa ccatgctttc tgtcgataaa atcatcaagc attcctgatt
    14821 ccatagggcc tggacgataa agcgcaagaa ccgcaatgat atcttcaaaa cgctctggtt
    14881 ttaagcgtgc atttaagctt tgcataccgc ctgattcgat ttgaaaaatt cccaaagtat
    14941 ttccactttg tatggtttta taaactttgc tatcatttac atctatagtt tcccaaataa
    15001 tgtctttatt gtaacgcttt ttaataagct tgatcgcatt attgattact gttaaggttt
    15061 taagacctaa aaagtcaaat tttatcaaat ccacatcttc taaatgatct ttagaatact
    15121 gcgttaccaa atgtctttca tcatttttac tttgtctaaa aagcggagtt ttcttccata
    15181 aactttcatt agaaattaca acacctgctg cgtgcatacc cgcattgcga tttaatcctt
    15241 ctaaagctct tgcatactcc caaacttcaa gacctttagg atgacgatcg ataaattctt
    15301 tgattttagg ttctttttca taagcagcat caagagtgat tttaagctct tcaggcacaa
    15361 gtttagcaag ctcatcagca tcttgaatac tcatatcaca aactctagcc acatcacgaa
    15421 tcaccccttt agccaaaagt ttaccaaagg taatcacctg tgcaacctta tccgctccat
    15481 atttatcaat cacataatca atcacttcag cacgtctgtc ttgacaaaaa tccacatcaa
    15541 tatcaggcat gctcacacgc tcaggattta aaaaacgctc aaaaagtaga ctataaggaa
    15601 taggatctaa atccgtaatc cttaaacaat aagaaaccaa acttcctgca gctgatcctc
    15661 ttccagggcc tactggaata cctttatctt tagccacttt aataaaatca tgaacaataa
    15721 gcatataacc tgaaaatttc atatttttaa tgatgttaat ttctacttca agtctttgtt
    15781 tgtattcttc atgcttgctt tcatcgataa attttaatct ctcttcaagt ccctttttac
    15841 aaagttcttc aaaaactatg tcatcattat caaagctaaa ttcttttgtt tcttcaggta
    15901 agataatatt atgatcttta gcatattctc ttgtaaattt aaaattcggt ggagtgggat
    15961 tgccaagatt aagctctaaa ttacattttt gcgcgatttc ttgtgtattt tctatagctt
    16021 ctggaatatc tgcaaaaagc tcactcattt gctcagggct tttaacataa aattcatgca
    16081 cactatgacg cattctatca ggatcgttaa gtttttttcc catggctata cacataaaaa
    16141 cctcatgggc agccgctctt tctttaaaag tataatgcgt atcatttgta gcaatgattt
    16201 ttatatttaa ttctttagaa agtctgataa tatcatcatc tatcattctt tgatcgccta
    16261 taccatgacg catgatttca aaataaaaat catctttaaa aactttttta taccataatg
    16321 ccgcttcttt tgctgcttca tagccttttg caccaaaacg cacatttctt tcactataag
    16381 tatttaagtg ccaatttact tcaccttgca agcaagcaga agagcaaata agaccttcgc
    16441 tataatcttc caaaagcttt ttattgatac gcggataata atacaaacct ttaatataac
    16501 tttgagaact taaatacatt aaattttgat atccgatctc attttttgca tacaaacaaa
    16561 ggtgaaaacg ctgacgagaa cttttatcat ctaattcatc atgattatgc aaatatgctt
    16621 ccataccaat gataggtttt aaaccttgtg ctttcattgt ttgataaaaa tcaattgccc
    16681 caaacatatt tccatgatct gtcatagcaa cacttgtagc accctgctct tttaaagtca
    16741 aagctaattc tttaagttta ttggctccat caagcaaaga atattctgta tgtaaatgca
    16801 agtgtgtaaa ttgactcatt ttcttccttt aattttttaa ggcttatttt aattttgata
    16861 aaaattataa atttttctcg ctgaatttga aagaaattag ccctaaattt caacttaaat
    16921 ttgacaaaaa ggcaaaaatt cagccaaaat aaactataat aaaatctaag attttaatct
    16981 taataaaaag aacttttcaa aggatgaaat gatgaaagta aaaattgctt attgcaatct
    17041 ttgaaattat cgcccacaag ctgcaagggt tgcagaagaa ctacaaagcg atttcaaaga
    17101 tgttgaagta gaatttgaaa ttggcggcag aggtgatttt atcgttgaag tagacggaaa
    17161 agttatcttc tctaaaacac aacttattaa ttgcgaaagt gaaagatttc catatcaaaa
    17221 tgaaattaat caattaataa aaaatagagt gtaatcaaac actctatcat aacattttct
    17281 catattcctt accaatatat atgttttgct catactcgat aataggacgc ttaatacaac
    17341 ttggattttc taatacaatt ttttcaagtt ctttttcatt taaattttta actttttctt
    17401 tgtttaagcc aagtttttta gaagttaatc cagcagtatt gataagttct tcaaaagatt
    17461 tttgttttaa ccatgtgtat aaaatatctt gattaatctt tttaatatcc ataaaatcaa
    17521 acacaatacc tttttgtgtt aaagcatcca tagctttctt tacagaattg caatttttaa
    17581 taccataaag tttcattttc tagccttttt taccaaatct gcgattaaaa aagcaagttc
    17641 taatgcttga tccgcattaa gtcttggatc gcattgagtc tcataacgat cttccaagct
    17701 ttgagcagta acattgcttg caccacctgt gcattctgtt acatctttcc cagtcatttc
    17761 aagatgcact ccacctggat aaaccccttc gcttattgca atctcaaaaa aagatctcac
    17821 ttcttgcata attttatcaa actcacgtgt tttaaaattg cctgctttta ccgtatttcc
    17881 atgcatagga tctatgctat atactaaatt taaaccttca cttttaagtt tagagaaaat
    17941 ttttggcaaa ttattgataa ttttatctgc acccatgcgg ataataatat ttaatcttcc
    18001 ttcttcatta tttggattta aaacatttgc taaagctatg atatcatcag cacttgcact
    18061 aggtcctatt ttaaccccta aaggattttt tactccactt aaaaaatgca catgagcttc
    18121 atcaagcgcc cttgttcttt cacctatcca aagcatgtga gctgaacaat cgtaaatttc
    18181 tccacttaaa ctatccactc tagttaaagc ttcttcataa ggcaaaagta aagcttcatg
    18241 tgaagtataa acactaactt ctcttagact tggagtatta cttgtattaa ttccacaagc
    18301 ttccataaaa gctaaagctt gtgaaatttt ttcactgata tcagtatatt gcttatggag
    18361 ttcactcttt tttaaaaagc ccaaattcca acgatgtact tcatgtaaat ctgctaaacc
    18421 acccttagca aatccacgca acaaatttag cgttgttgcg ctttgataat aagcttcaag
    18481 cattctatgt ggatcaggaa tgcgtgcttg ttcactaaat tcaaaaccat taataatatc
    18541 accacgataa ctaggaagac ttataccatc taactcttca aaatcactac ttcttggctt
    18601 ggcaaactgc cctgcaatac gaccaatttt tataacagga catccaccag caaatgtaag
    18661 tactatagcc atttgaagta aaattttaaa catatcacgg atatttacag cgccaaaatt
    18721 ttcaaaactt tcagcacaat ctccaccttg aagtaaaaaa gcttcttttt tacaaactct
    18781 tgctaaagac ttttgaagat ttctcacttc tccagcaaaa accaaaggag gaagcttctc
    18841 aagtcttgct aaaactctat tcatttcctc ttgatctgga tagataggtt gctgttttat
    18901 aggatagttt ttccaagaat tcttagtcca catggttttt tctttcgttt tatttatcag
    18961 cttcctctat aagttgaata accaaaagga gaaagggtta ttggaacatg ataatgtttt
    19021 tgatctttag aaagctcaaa acttacctct acaaaaggat aaaaagtatt tattttgtgt
    19081 gatgtgtaat agtcttttgt gaaaaattta agcttataaa ttccaaaagc cctattttca
    19141 gctttttcat atggtaataa atctcctatt ctaccatttt cttcggtaaa ttcttcactt
    19201 acttttttcc actgttgatt tgcttccaac ttataaagct caacttttac tttaggagca
    19261 ggttgtccag aagtaatatc caaaacatga gtacttaatt gatattcagt agcactcaaa
    19321 aacattggca cgcttgctag tattaataaa gtttttttaa tagaaaacat tttctctcct
    19381 tgtataatat ttacaagga
//
LOCUS       DAPIWB010000034        18920 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.035, whole genome shotgun sequence.
ACCESSION   DAPIWB010000034 DAPIWB010000000
VERSION     DAPIWB010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18920
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.035"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(74..526)
                     /locus_tag="RJ266_000960"
     CDS             complement(74..526)
                     /locus_tag="RJ266_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HDV7354718.1"
                     /translation="MFKVYYKMPLCYLSLHSDGKFLTRVDFCDNKRSEKNCSLLDLAK
                     YELDLYFTHKLRKFSIPVLIQGTDFESKVYKALMEIPYGKIATYKDIAEKINHPKAFR
                     AVGNANSKNQIPIFIPCHRVIASNGIGGYNGGLEIKRFLLENEGVNLK"
     gene            581..3127
                     /locus_tag="RJ266_000961"
     CDS             581..3127
                     /locus_tag="RJ266_000961"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HDV7354719.1"
                     /translation="MSFIQEYNKLVEERAALGIPPLPLNANQTRELCKLLENENNEEL
                     ANLLENRVNPGVDDAALVKCEFLDSILKGKISAPNIDKKRALRMLGTMLGGYNVKVLI
                     DALKDENIAKDAAEVLKNIIFVHDNFHTIAELSKNNPHAKEVLQSWANADWFNKKEKL
                     PQVIKCIVFKVAGETNTDDLSPAGDAFTRSDIPLHANAMLKVRQTGSLEKIKELKKSG
                     REVVYVGDVVGTGSSRKSAINSIQWHLGKEIEGVPNKHSGGIVMGSTIAPIFFNTAQD
                     SGALPIICDVTNLEMGDEFEIHPYDGKIIKNGSAIAEFTLSPNTLLDEVRAGGRIPLI
                     IGRGLCTKAREFLGMESENIFTKPEQPKSSSGGYTLAQKMLGRACGVEGVRPGMYIEP
                     ITLTVGSQDTTGPMTRDEIKELASLGFNADFVMQSFCHTAAYPKVSDSNLHKTLPNFM
                     TSRGGVSLKPGDGVIHSWLNRFVLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAVTG
                     SMPLNVPESVLVRFSGELQAGVTLRDLVNAIPYYAIKQGQLTVEKKNKKNIFAGKILE
                     IEGLPNLKVEQAFELSDASAERSAAACSVDLSIESVSEYIKSNISLIEAMIEAGYENK
                     ATLARRAEKMREWLKNPTLLRADKDAKYAYIIDINLNDIKEPILACPNDPDDVATLSE
                     ILADNKRPKNIDEVFVGSCMTNIGHYRALGEILKDKGILKTRLWVVPPTKMDKAQLIN
                     EGYYSIFGAAGARIEVPGCSLCMGNQARVNDGAVVFSTSTRNFDNRMGMGAKVYLGSA
                     ELAAVCAILGKIPSKEEYLQIVSEKLSDEHKANIYRYLNFNEIENFKLEN"
     gene            3187..4425
                     /locus_tag="RJ266_000962"
     CDS             3187..4425
                     /locus_tag="RJ266_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDV7354720.1"
                     /translation="MKLLFASFCCFASLMASDAINCDNIKNNKTLLNESSNLDYLNIA
                     SSCKESLKNQDFTKKLYAISNEIRGSNSSCNGVAYLPKLQQFDFLLLKIAIDPIAYQK
                     TLDTPENLEKKYDILKSYFRYWAYQSIGNFRLYKAFWQEYNNAIEPLEKYFESNFNFD
                     KGSNIYYTSNALNEFLNWAVGETKIYKDISPLAKIMSNKNYSVSYIQDFIFSNNPSQD
                     DLTIALQAALLNQREKEILELLIRFGARIDEGYESAIFYALESYENTNFLIQNGANVN
                     QANAFGKTPLFYAIEFNRLDIIKLLLDNGANVNQKYINNNEKLALSANIGSNTPYFIT
                     FCALEHTSKNVLMHAAAYGNVEILKLLISKGANFNAVDDLGFNALDFALSAGKKENAD
                     YLKSLGLKANENLFYGGSLE"
     gene            4422..5171
                     /locus_tag="RJ266_000963"
     CDS             4422..5171
                     /locus_tag="RJ266_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HDV7354721.1"
                     /translation="MKTAFVTGASSGFGRACVEAFIQEGYKVIALARRKERLEELKNA
                     YKDKIYTLCIDVRNQKEIFEAIENLPKEFQEIDVLFNNAGLALGVDEFDKLNLEDINT
                     MVDTNIKGFLYVAKAVIPILRKQKNAYIFNLGSVAGRNPYFGGNVYCGTKAFVGQFSL
                     ALRNDLRGSNIKVTNIAPGLCKTEFSEVRFKGDIQKADAVYENTQFISANDIAKVVMS
                     IINLPSHINVNEIELMPVTQTWNGFYIERDE"
     gene            5168..6901
                     /locus_tag="RJ266_000964"
     CDS             5168..6901
                     /locus_tag="RJ266_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HDV7354722.1"
                     /translation="MNKFLVSLFLPLVAFANSSEAAANANLFGAFTLIPPLVAIALAF
                     ITKDVILSLFTGVLSGTFLLSLSTNIFKAQHLTFVNYYNTTVESFSKIISYILGSTSD
                     PVNAGIILQILCIGGLVALITKMGGAKAVALKFAKRAKSAVSAQVNTWFLGLLIFFDD
                     YANLLIVGPIMRPLADKFKISREKFAFIIDSTAAPVAGIAVISTWIGLEVSLIKTAYE
                     HIGISNISAFGIFVETIPYRFYNIFMLFFVVMTAIMGREFGSMYKAEVRARTTGQIAP
                     LPKSGTLDTTELEDQFLAPKEGIKIRAFDAIVPIFTLIILAILGFYFNGLSTLEGEEL
                     AKASTNPLSFETFRAAFGNADSSVVLFQAALFAAIVAIFIGVRRKIFNLKEAVETWIY
                     GWKTMIFTIVLLLFAWSLSSIVKDLGTSLFITSLLADKLPEFILPATIFAFASAISFA
                     IGTSYGTMGILMPLAVPLAHEIAKINDMDANAMHHYMVINISCVLTGAIFGNHCSPIS
                     DNVILSSMSAKCDHMEHVRTQIPYALFICGISLIAGYIPVSLGLSVWFVLPLNFILIA
                     LLLRLIGKKVP"
     gene            6898..7971
                     /gene="trmA"
                     /locus_tag="RJ266_000965"
     CDS             6898..7971
                     /gene="trmA"
                     /locus_tag="RJ266_000965"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HDV7354723.1"
                     /translation="MSLENFGNFLTLDEKHSFIKKYFKEFYTKDFKLFASKDKHYRTR
                     AELSFYHENDTLFYAMFDPKNKKKYIIEYLDFADEKICAFMPKLLEYLRQDNKLKEKL
                     FGVEFLTTKQELSVTLLYHKNIEDIKSNLENLSNNLHINLIARSKGKKLIFKTENLRQ
                     TLNIQGRKIFYEFNNDCFIQPNTTINEKMITWVCEILNTQKRMDLLELYCGYGNFTLA
                     LAPFFFKILATEISKSNINFALKNCELNNTTNIHFARLSSEELSLAIKKEREFFRLKD
                     IRLDDFNFSHVLVDPPRAGLDKSVIDLIKKYENIIYISCNPITLKENLKELSLTHRAE
                     EFALFDQFVNTPHLECGVFLSKV"
     gene            complement(7958..8374)
                     /locus_tag="RJ266_000966"
     CDS             complement(7958..8374)
                     /locus_tag="RJ266_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002956941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein CopD"
                     /protein_id="HDV7354724.1"
                     /translation="MEEFYPYTLTIHLLCAILFIGYLFVDVFVLGVVKKKNPNFDKSL
                     FSATGVKIMPFVVLLLFLSGGALAGFHFKPLNLLFAVKIILAFGILSLVVFSLFCHFI
                     LKKKNPLGVFIHPFVFVLCIAIVILAKLMNYFFIPC"
     gene            8493..8906
                     /locus_tag="RJ266_000967"
     CDS             8493..8906
                     /locus_tag="RJ266_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HDV7354725.1"
                     /translation="MNEKETISYIINTSKNIAIFALSPDKTKASYRVAEFLQRKNYKI
                     FPIYPKEEFILNEKVYRNLDQIEEKIDTLILFRKGEVALEILPKLVEKNIKNLWLQLG
                     ISNETAKEECKKLDINFIQNRCIMLEYPYFKTKEK"
     gene            8906..10117
                     /locus_tag="RJ266_000968"
     CDS             8906..10117
                     /locus_tag="RJ266_000968"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="HDV7354726.1"
                     /translation="MLELNKIYKAKQQISGFVNKTPFIYSSFLSDICQSEIYLKNENL
                     QITGAYKIRGAYNKIANLSAEQKQHGVIAASAGNHAQGVAISAKKFGIKAVIVMPEST
                     PLLKVSATKALGAEVILKGDNFDEAYVFATSYAKENNLSFIHPFEDEFVMAGQGTLML
                     EMLDEISDLDMIIAPVGGGGLISGIASAAKQINPNIKIIGVGAKGAPAMYESFHAKKI
                     KNAKSVRTIADGIAVRDANPINFNIILECVDDFIQVDDEEIANAVLFLLEKHKIIVEG
                     AGAASVATILHQKINTQNHKKIGVVLSGGNIDAQMLNIIIEKGLFKSYRKMQIHVTLV
                     DKPGALLHLTDSLKIANANIVKIDYDRFSTKLDYGDAMISITLETKGKEHQEEIRKIL
                     TQKAFNFYESF"
     gene            complement(10114..10839)
                     /gene="truA"
                     /locus_tag="RJ266_000969"
     CDS             complement(10114..10839)
                     /gene="truA"
                     /locus_tag="RJ266_000969"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HDV7354727.1"
                     /translation="MMKIKIIFSYDGSAFLGSATQPHKKGVQDALSGVLSHLGIFSPL
                     LMASRTDKGVHASYAVASVECGDHFTNLEYLQKQLNKFSHPFIHVKKIEKVKDDFEVR
                     FDVKSREYRYIFSHASYSPFMASYVHFYPKFDLGKANELLGFFVGKKDLKFFCKSGGD
                     NKTTLREIFIARAYAYKDFSIFHFKANGFLRGQIRLSVASVLKVLEGKMSEKELKEQI
                     EAKKQYNHFLAPPNGLYLSRICY"
     gene            complement(10836..11861)
                     /locus_tag="RJ266_000970"
     CDS             complement(10836..11861)
                     /locus_tag="RJ266_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HDV7354728.1"
                     /translation="MKLSLRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEI
                     SFLDLLKLYGFMLPRILIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKF
                     FLKIASLISAFMLVVALVMIPIVFELQDNFVNYKSTQVKFNYKTGEFGQKFLDWMIFI
                     EKQDSDKYENIIMYRPKHKADDKEQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQS
                     IFSGEFDTLVVNTQFNTDNLQTKKFYEYWNDLNENPQRAREFVIYTTIALFPLASTLF
                     ALCFGLVTYRYEKGYVYLGMFGVIAIYFGLLSFFSQPPILACLGIFSLSLFVSAYCFK
                     KMILSRY"
     gene            complement(11861..12637)
                     /locus_tag="RJ266_000971"
     CDS             complement(11861..12637)
                     /locus_tag="RJ266_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HDV7354729.1"
                     /translation="MIFFIIILGACLGSFCTSLASRIIEKKPFFISRSFCFSCDTKLK
                     YYEIIPIFSYIFLKAKCQTCKCHLPISLLINEILGIILLILVYSLSQNFYDFLFLSLF
                     LFNLFLLSLIDIKLKAVPQILLWSAFLFAFFYAFRESEILHFLIFKEFSGGFLLNAFS
                     FGGFVFLLKSLVFFLMNFHKKDEILENLGDADIIIMSCIGGILGFEYGFLVLLIASIL
                     TLPFFIFFKIKAIKEQELAMIPFLNIAFVVVLFYKNLGLF"
     gene            complement(12634..13302)
                     /gene="uppS"
                     /locus_tag="RJ266_000972"
     CDS             complement(12634..13302)
                     /gene="uppS"
                     /locus_tag="RJ266_000972"
                     /EC_number="2.5.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-trans,poly-cis-decaprenylcistransferase"
                     /protein_id="HDV7354730.1"
                     /translation="MNELKHLAVVMDGNRRWARAKGFLAKLGYSQGVKTMQKLMEVCM
                     EENISNLSLFAFSTENWKRPKDEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDLSRL
                     EDKVREKITLVEEKTKHCDALCVNLAISYGARDEIIRAAKRVIEKKLELNEENLTQNL
                     DLPLDVDLMLRVGNAKRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRER
                     TFGK"
     gene            complement(13306..13923)
                     /locus_tag="RJ266_000973"
     CDS             complement(13306..13923)
                     /locus_tag="RJ266_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354731.1"
                     /translation="MSMINSTLPIQMKVLAKSGYGHYTLLLNHKKIQTKSMIELEIGA
                     EYLAELYMQNGGVIQFKHLSKRPNFKPFEEGLALIIAILQDKISYKKFIIQNLLDCKD
                     IERYQILKEMLFASFENIYHIPFIFENKSCLFQMRKRAKYLEIYLYFSVFGALKILID
                     SQGISVFTPFAKVQKFLNEHLDFNVSQENKIEPLFVFKRLFDFKG"
     gene            complement(13920..15074)
                     /gene="coaBC"
                     /locus_tag="RJ266_000974"
     CDS             complement(13920..15074)
                     /gene="coaBC"
                     /locus_tag="RJ266_000974"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HDV7354732.1"
                     /translation="MKTILLAISGSIAFYKSYELISLFKKEGFRVKVLLSNGLLKFAS
                     KMSFEALADEVLCEENESWQNSNNHIAFSKDADLVLFAPASVNSINKLAFGIADNLFI
                     QTLIAANKPLIIAPAANTNMFHHFSTRNSLKILKENKALIIEPICKVLACKDEGVGAL
                     AEVKDIFNITKRELLKEKFWCDKSVVITGGGTKEKIDDVRCVSNFSSGKMAKAIADAF
                     YFLGARVKLLSSVEFDTPYELYKFESSKDLKELLDKNLNHDFLIMTAAVSDFIPQSVK
                     GKIKKNEHLQGLNLHLSLNEDLLKTCKFQGKKIGFKMEFDSQNALENAKKSLKDKQLD
                     MVCLNIIDQKNYFGSDQNELYFITLNNENKSTLQSKEKLAFELVKWCEKL"
     gene            complement(15071..16360)
                     /gene="glmU"
                     /locus_tag="RJ266_000975"
     CDS             complement(15071..16360)
                     /gene="glmU"
                     /locus_tag="RJ266_000975"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HDV7354733.1"
                     /translation="MKTSILILAAGLGTRIKSQKPKVLQELCQKSMILHILKKAFALS
                     DDVSVVLSHQKERVEKEILEYFPKTQILEQDLQNYPGTAGALSGFEPKNERVLILCGD
                     MPLVEQTSLEALLSNNAKLNLAVFKARDPKSYGRVVIKNDSVEKIVEFKDANTQEKEI
                     NTCNAGVYVIDSRLLKELLPLIDNNNAAKEYYLTDIVKLAKEKDVMIKAVFVDEDEFM
                     GINDKFELSIAENFMQEKIKKYWMQQGVIFHLPQSTFIGADVEFVGECEVYENVRIEG
                     KSKIINSIIKSSSVIENSIVENSDVGPLAHLRPNCELKNTHIGNFIECKNAKLNTVKA
                     GHLSYLGDCEIDSGTNIGCGTITCNYDGVKKHKTIIGKNVFVGSDTQFIAPVKIEDEV
                     IIAAGSTVSVNVEKGALFINRAGHKMIKDYYYKKFQK"
     gene            16503..17237
                     /gene="fliP"
                     /locus_tag="RJ266_000976"
     CDS             16503..17237
                     /gene="fliP"
                     /locus_tag="RJ266_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344227.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HDV7354734.1"
                     /translation="MKKILLFLLLSMSLFAAEATIPTVNLSLSAPNTPNQLVTTLNIV
                     IVLTILALAPSIVFVMTSFLRLIVVFSFLRQAMGTQSMPPNTILVTLALILTFFIMEP
                     VATKSYNEGIKPYLAEKIGYEEAFIKGAKPFKDFMLKNTREKDLALFYRIRNLPNPKT
                     IDDVPLTVLVPAFMISELKTAFEIGFLIYLPFLVIDMVVSSVLMAMGMMMLPPTMISL
                     PFKLLIFVLVDGWNLLVQRLVESFVT"
     gene            complement(17253..18023)
                     /locus_tag="RJ266_000977"
     CDS             complement(17253..18023)
                     /locus_tag="RJ266_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004315550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HDV7354735.1"
                     /translation="MKKIILIFISFFALNLSAKDLVVGMELGYPPFEMSDKTGKASGI
                     SVDFLEAFAKKNGYKLVVKNIAWDGLIPALKTAKIDLIMSSMTITDERKKVVDFSIPY
                     AKANLAILTPLNSDITNIKDLDKKGKVLALKRGSTGHLYAVKNLKNATINLFDKENAA
                     ILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILAPFQENPEFWGIAVQKGNAELKKE
                     LDEFIAESKKDGLFDSLGEKYLKDVKDTFKKNNLEFFF"
     gene            complement(18117..18899)
                     /locus_tag="RJ266_000978"
     CDS             complement(18117..18899)
                     /locus_tag="RJ266_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002860491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354736.1"
                     /translation="MADETSGNYYNSFDMASIVKSYYNSFNQVIRAFPNDKTSFSKAD
                     LEQLPKGLNYINNEDNEKIVKNIFNAEQFHEAQAIKYSTMGLDMNLMKLDFSPQSMEQ
                     DPSIEGDFNPDMSVYPQNEDGSYSKEALFMSFLKSYPPFPSSNQVVLSPEAKVLEAQR
                     KQEMKANPSFDISLDDIMTGKVDFASLLKGYAQDGWLDAGIYAMEKGVKWQNVYVGSG
                     ISFDREFHQAKANGWKASNESINSFVNNIMDRLNNLIGQTRV"
BASE COUNT         6724 a         3107 c         2749 g         6340 t
ORIGIN      
        1 atattgttta attcttgaaa attatgatat ttttgaacaa gaatttgaaa acaaagaaaa
       61 tcaaacccca agcttatttt aaattcactc cttcattttc aagcaaaaat ctttttattt
      121 caagccctcc attatatcct cctatgccat tgcttgcaat aactctatga caaggtataa
      181 aaataggaat ttgattttta gaatttgcat ttccaacagc tctaaaagct tttggatgat
      241 taattttttc tgctatatct ttataagtag ctattttgcc ataaggaatt tccattaaag
      301 ccttataaac ctttgattca aaatccgtac cttgtatcaa aacaggaatg ctaaattttc
      361 taagcttatg agtaaaatat aaatcaagtt catattttgc taagtcaagc aaactacaat
      421 ttttttctga tcttttatta tcacaaaaat cgactctagt taaaaatttt ccatcactat
      481 gtaaagatag gtaacataaa ggcattttat aataaacttt aaacattttt tatccttcaa
      541 agagctacaa ttataataaa aaatatttaa ggagtagaaa atgtctttta tacaagaata
      601 caataaactt gttgaagaaa gagccgcttt gggtatacca ccccttcctt taaatgcaaa
      661 tcaaactaga gaactttgta aattacttga aaatgaaaat aatgaagagc ttgcaaatct
      721 tttagaaaat agagtaaatc ctggtgttga tgatgcagct ttagtaaaat gtgaattttt
      781 agattccata cttaaaggca aaatcagtgc tccaaatata gacaaaaaaa gagccttaag
      841 aatgcttgga actatgctag gcggatataa tgttaaagtt ttaatcgatg ccttaaaaga
      901 tgaaaacata gccaaagatg ctgcagaagt gttgaaaaat attatttttg tacatgataa
      961 tttccatacc atagctgaac ttagcaaaaa caatccacac gctaaggaag ttttacaaag
     1021 ctgggcaaat gcagactggt ttaataaaaa agaaaaacta ccacaagtga ttaaatgtat
     1081 agtttttaaa gtagcagggg aaacaaatac cgatgatcta agccctgcag gagatgcttt
     1141 tacaagaagc gatattcctt tacatgcaaa tgccatgcta aaggtaagac aaacaggatc
     1201 cttagaaaaa atcaaagagc ttaaaaaaag cggtcgcgaa gtggtttatg taggtgatgt
     1261 tgtaggaaca ggttcaagta gaaaatcggc aataaattcc atacaatggc acttaggaaa
     1321 agaaatagaa ggtgtgccaa acaagcacag cggtggtata gtaatgggtt caactatagc
     1381 accgattttc tttaacactg ctcaagatag cggggcttta cctatcatct gtgatgtaac
     1441 aaacttagaa atgggtgatg agtttgaaat tcatccttat gatggaaaaa tcataaaaaa
     1501 tggctctgca atcgcagaat ttacactcag tccaaacact ctcttagatg aagttagagc
     1561 aggaggaaga atcccactta tcataggtcg tgggctttgt actaaggcta gagaattttt
     1621 aggaatggaa agcgaaaata tctttaccaa acctgaacaa cctaaatctt caagcggtgg
     1681 ttataccttg gctcaaaaaa tgctaggtcg tgcctgtgga gttgaaggtg tgcgtccagg
     1741 tatgtatata gaacctataa ctttaaccgt aggctctcaa gataccacag gtcctatgac
     1801 tagagatgaa attaaagaac ttgcaagcct aggttttaat gcagactttg ttatgcaaag
     1861 cttttgccat acagctgcgt atccaaaagt aagcgattca aatttacata aaaccttgcc
     1921 caatttcatg acaagtcgtg gtggggtaag tttaaaacca ggtgatggag ttatccactc
     1981 ttggcttaat cgttttgtat tgccagatac cgtaggaacg ggtggggatt ctcacacacg
     2041 ctttcctata ggaatttctt tccctgcagg aagcggactt gtagcttttg ctgcagttac
     2101 tggttctatg cctttaaatg tccctgaaag tgttttagta cgttttagtg gagaattgca
     2161 agccggagtt accttaagag atttggttaa tgctatacct tattatgcaa tcaaacaagg
     2221 acaacttacc gttgaaaaga aaaataagaa aaatattttt gcaggaaaaa ttttagaaat
     2281 agaaggcttg ccaaacttaa aagtcgaaca agcttttgaa ctcagtgatg caagtgctga
     2341 aagatctgca gctgcttgta gtgtagattt aagcatagaa agtgtaagcg aatatatcaa
     2401 atccaatatt tctttaattg aagctatgat agaagcagga tatgagaata aagctaccct
     2461 tgctagaagg gctgaaaaaa tgagagaatg gcttaaaaac cctactcttt taagagcaga
     2521 taaagatgca aaatacgctt atattataga tattaatctt aatgacatta aagagccaat
     2581 cctagcttgt ccaaatgacc ctgatgatgt ggcaacctta agcgaaattt tagccgataa
     2641 taagcgtcca aaaaatatag atgaagtttt tgtaggttct tgtatgacaa acataggaca
     2701 ttatagagct ttgggagaaa ttttaaaaga taaaggcata cttaaaacca gactttgggt
     2761 agtgcctcca acaaaaatgg ataaagcaca acttattaat gaaggttatt acagcatctt
     2821 tggcgcagca ggtgctagaa tagaagttcc tggttgttct ttgtgtatgg gtaatcaagc
     2881 tagagtaaat gatggagctg tagttttctc aacttctaca agaaattttg acaaccgtat
     2941 gggaatgggt gctaaagtat atttaggcag tgcagaactt gcggcagttt gtgcgatttt
     3001 gggtaaaatt ccaagcaagg aagaatactt acaaattgtt agcgaaaaac taagtgatga
     3061 gcataaggca aatatctata gatatttaaa ttttaatgag attgaaaatt tcaaacttga
     3121 aaattaattc aaatttaata cttatttgga ttaaataaca aaattaaaat tttcaaagga
     3181 aaaatattga agttattatt cgcttccttt tgttgttttg caagtttaat ggctagtgat
     3241 gccattaact gcgacaacat taaaaataat aaaacattgc taaatgaaag ttcaaattta
     3301 gattatttaa atatagcttc aagctgtaaa gaatctttaa aaaatcaaga ttttacaaaa
     3361 aaactctatg caatttccaa tgaaattcgc ggaagcaata gctcttgtaa tggtgtggct
     3421 tatttgccaa aattacaaca atttgatttt ttattattaa aaatagctat cgatcccatc
     3481 gcttatcaaa aaactttaga tacacccgaa aatttagaaa aaaaatatga tattttaaaa
     3541 tcttatttta gatattgggc atatcaaagc ataggaaatt ttagacttta caaagctttt
     3601 tggcaagaat acaataatgc tatagaacct ttagaaaagt attttgaaag taattttaat
     3661 tttgacaaag gtagtaatat ttactatact agcaatgcct taaacgaatt tttaaattgg
     3721 gctgttggtg aaacaaaaat ttacaaagac attagtcctt tagcaaaaat catgtcaaat
     3781 aaaaattatt cagtatctta tatacaagat tttatttttt caaataatcc aagccaagat
     3841 gaccttacta tagccttgca agcagcgctt ctaaatcaaa gagaaaaaga aattttagaa
     3901 cttttgattc gttttggcgc taggattgac gaaggttatg aaagtgctat tttttatgca
     3961 ttggaaagtt atgaaaatac aaacttttta atccaaaatg gagcaaatgt taatcaagcc
     4021 aatgcctttg gtaaaacccc acttttttat gccatagagt ttaatcgtct tgatatcata
     4081 aaactacttc ttgataatgg agcaaatgtt aatcaaaaat atattaataa caatgaaaaa
     4141 ttagcattaa gtgcgaacat aggttcaaat acgccttatt ttattacatt ttgtgctcta
     4201 gagcacactt caaaaaatgt tttaatgcat gctgcagcct atggaaatgt tgaaatttta
     4261 aaacttctta tttcaaaagg agcaaatttt aatgctgttg atgatcttgg ttttaatgca
     4321 ctcgactttg cgctatcagc aggtaaaaaa gaaaatgctg attatctaaa aagcttgggt
     4381 ttaaaagcaa acgaaaatct attttacgga ggtagtttag aatgaaaacc gcatttgtta
     4441 caggagcgag ttcaggtttt ggtagagctt gtgttgaagc ttttatacaa gaaggctaca
     4501 aagtaatcgc ccttgctaga cgcaaagagc gtctagaaga gctaaaaaat gcttacaaag
     4561 ataagattta caccctttgc atagatgtaa gaaatcaaaa agaaatcttt gaagctattg
     4621 aaaatttacc taaagaattt caagaaattg atgtgctttt taataatgca ggtttagctt
     4681 taggggtaga tgaatttgat aaattaaacc ttgaagatat taacactatg gtagatacaa
     4741 acatcaaagg atttttatat gttgcaaaag ctgttattcc tatacttcgt aaacaaaaaa
     4801 atgcttatat ttttaactta ggttcggttg cgggacgcaa tccttatttt ggaggcaatg
     4861 tgtattgtgg aaccaaagcc tttgtaggac aattttcatt ggccttaaga aatgatctta
     4921 gaggaagcaa tatcaaagta acaaacattg ctccaggact ttgcaaaact gaatttagtg
     4981 aagtgcgttt taaaggagat atccaaaaag ctgatgcagt gtatgaaaat acgcaattta
     5041 tcagtgctaa tgatattgcc aaagtggtaa tgtctatcat taacctacca agccatatta
     5101 atgttaatga aatcgagctt atgccggtaa cacaaacttg gaatggattt tatatagaaa
     5161 gagatgaatg aataaatttt tagtttcatt gtttttacct ttagttgcat ttgcaaactc
     5221 ctcagaagca gctgcaaatg ctaatttatt tggagctttt acgcttatac cacctttagt
     5281 tgctattgct ttagccttta tcacaaaaga tgttatttta tcgctcttta ctggagtttt
     5341 aagtggaact tttctactta gcctttctac aaatattttt aaagcacaac atttaacttt
     5401 tgtaaattat tacaatacta cagtagaatc tttttcaaaa attatttcct atatcttagg
     5461 ttcaacttca gatccagtaa atgcaggaat cattttacaa attctttgta taggtggtct
     5521 tgtggcactt attacaaaaa tgggaggtgc aaaagctgta gcattaaaat ttgccaaaag
     5581 agccaaatca gctgtatcag ctcaagttaa cacttggttt ttagggcttt taatattttt
     5641 tgatgactat gctaatttac taatcgtagg tccaattatg cgtcctttgg cagataaatt
     5701 taaaatttct cgtgaaaaat ttgcctttat tatcgactct accgcagctc ctgtggcagg
     5761 aatagctgta atttctactt ggataggctt agaagtttct ttaattaaaa ccgcttatga
     5821 acacataggc attagcaata ttagtgcttt tggaattttt gttgaaacca taccttatcg
     5881 tttttataat atcttcatgc ttttttttgt agtcatgact gcaatcatgg ggcgtgagtt
     5941 tggttctatg tacaaggctg aagtgcgtgc aagaaccaca ggacaaattg ctcctctacc
     6001 taaatcaggc acactagata ctactgaatt agaagatcag tttttagcac caaaagaagg
     6061 tattaaaatt cgtgcttttg atgctattgt tcctattttt actttaatca ttttagctat
     6121 attaggattt tattttaatg gacttagcac tttagaaggc gaagaacttg caaaagcaag
     6181 taccaatcct ttgtcttttg aaacttttag agctgctttt ggaaatgctg attcttctgt
     6241 ggtgttattc caagctgctt tgtttgctgc tattgtagcg atttttatcg gggtgcgtcg
     6301 taaaattttc aatcttaaag aagcggtaga aacttggata tatggctgga aaaccatgat
     6361 ttttaccata gtattgcttt tatttgcttg gtcactttca agcatagtaa aagatctagg
     6421 aacttcttta tttatcacta gtttgcttgc agacaaattg cctgagttta ttttgcctgc
     6481 tactattttt gcttttgctt cagccatttc ttttgccata ggaacaagct atggaactat
     6541 ggggatttta atgcctttgg ctgtgccttt agctcatgaa atcgccaaaa tcaatgatat
     6601 ggatgcaaac gctatgcatc attatatggt tattaatata agctgcgttt taacaggtgc
     6661 gatttttgga aaccattgct caccaatttc agataatgta atcctttcat ctatgagtgc
     6721 aaaatgcgat catatggagc atgtaagaac acaaattcct tatgctttat ttatctgtgg
     6781 catttcttta atcgctggat atattcctgt atctttagga cttagcgttt ggtttgtctt
     6841 gcctttaaat ttcatactta ttgcactttt actaagactc atcggaaaga aagttccatg
     6901 agtcttgaaa attttggaaa ttttctcact ttagatgaaa aacattcttt cataaaaaaa
     6961 tattttaaag aattttatac aaaggatttt aaactttttg cttcaaaaga taaacattat
     7021 cgtacaagag ctgaactttc attttatcat gaaaacgata cgctttttta tgcgatgttt
     7081 gatccaaaaa acaaaaaaaa gtacattata gaatatttag attttgccga tgaaaaaatt
     7141 tgtgctttta tgccaaaact tctagaatac ttgcgtcaag ataataaact aaaagaaaaa
     7201 ctttttggtg tagaattttt aaccacaaag caagaactta gcgtaacttt actctatcat
     7261 aaaaatatag aagatataaa gtcaaattta gaaaatttaa gcaataatct tcatatcaac
     7321 ctcatagcaa gaagtaaagg caaaaagctt atttttaaaa cagaaaatct aagacaaact
     7381 ttaaatattc aaggtagaaa aatattttat gaatttaaca acgattgttt tattcaacct
     7441 aacactacta taaatgaaaa aatgattact tgggtgtgtg aaattttaaa cactcaaaaa
     7501 agaatggatt tgcttgagct ttactgtgga tatggaaatt ttactttagc tttagcgcca
     7561 ttctttttta aaattttagc cactgaaatt tcaaaaagca atattaattt tgctttaaaa
     7621 aattgcgagc ttaacaatac aacaaatatc cactttgcaa gactttcaag cgaagaatta
     7681 agtcttgcta tcaaaaaaga aagagaattt tttcgtttaa aagatattcg attagatgat
     7741 tttaatttct ctcatgtttt agttgatcca ccccgtgcag gacttgataa aagcgtaatt
     7801 gacttaataa aaaaatatga aaatattatt tatatttctt gcaatcctat cactttaaaa
     7861 gaaaatttaa aagaattaag cctaacacat agagcggaag agtttgctct gtttgatcaa
     7921 tttgtcaata ctccacatct tgaatgtgga gtatttctta gcaaggtata aaaaaataat
     7981 tcattaattt agccagtatt actatcgcga tacaaagcac aaatacaaaa gggtggataa
     8041 aaacaccgag tggatttttc ttctttaata taaaatgaca aaataaagaa aaaacaacta
     8101 aagataaaat tccaaaagcc aaaataattt ttacagcaaa aagtaaattt aaaggtttaa
     8161 aatgaaaacc tgccaaagca cctccgctta aaaaaagcaa aagaaccaca aaaggcatta
     8221 ttttaacccc agtagcacta aaaagacttt tgtcaaaatt aggatttttc tttttaacta
     8281 cacccaaaac aaatacatca acaaacaaat aacctataaa caaaatagca caaagaagat
     8341 ggattgttaa agtatatgga taaaattctt ccatttttcc ctccttatta aacttcggaa
     8401 tttgctatat tataacactt ttttcatttt ttaaattcac tttagttaat tttttaatca
     8461 tttaagataa aataccaaaa caaaggttaa caatgaatga aaaagaaact atctcttata
     8521 ttataaatac aagtaaaaat attgccatat ttgctttaag tccagataag acaaaagctt
     8581 cttatagggt agcagaattt ttacaaagaa aaaattataa aatttttcct atttatccta
     8641 aagaagagtt tattttaaat gaaaaagttt atagaaattt agatcaaata gaagaaaaaa
     8701 tcgatacact tatacttttt agaaaaggcg aagtggcact agaaattctt cctaagcttg
     8761 ttgaaaaaaa tattaaaaac ctatggcttc aacttggtat tagtaatgaa acagccaaag
     8821 aagaatgtaa aaaattagat ataaatttta tacaaaatcg ttgcattatg ctagaatatc
     8881 cgtattttaa aacaaaggaa aaatagtgtt agagcttaat aaaatttaca aagcaaaaca
     8941 acaaatttca gggtttgtaa acaaaactcc tttcatatac tcttcttttt taagtgatat
     9001 ttgtcaaagt gagatttatc ttaaaaatga aaatttacaa attacaggtg cttataaaat
     9061 tcgtggagct tataataaaa tagccaatct tagcgctgaa caaaaacaac acggagtcat
     9121 tgcggcaagt gcaggaaacc atgctcaagg cgtggccatt agtgcaaaaa aatttggcat
     9181 taaagcagtt attgtaatgc cagaatccac tccgctctta aaagtttctg ctacaaaagc
     9241 cttaggagca gaggtgatac tcaaagggga caattttgat gaagcttatg tctttgcaac
     9301 ctcttatgct aaagaaaata atcttagttt tatccatcct tttgaagatg aatttgtaat
     9361 ggcaggacaa ggaactttga tgcttgaaat gcttgatgaa ataagcgatc ttgatatgat
     9421 tatcgcacct gttggaggtg gaggacttat aagtggtatc gcaagtgcag ctaaacaaat
     9481 caatccaaac attaaaatca tcggagttgg agccaaagga gctcctgcaa tgtatgaaag
     9541 ttttcatgcc aaaaaaatca aaaatgcaaa aagcgtacgc actatagccg atggtattgc
     9601 tgtgcgtgat gcaaatccta ttaattttaa tattatttta gaatgcgtag atgattttat
     9661 ccaagttgat gatgaagaaa tcgctaatgc ggtattgttt ttacttgaaa aacataaaat
     9721 catagttgaa ggcgcaggag ctgcgagtgt agccaccata cttcatcaaa aaataaatac
     9781 acaaaatcat aaaaaaattg gcgtagtttt aagcggaggc aatatcgatg cacaaatgct
     9841 aaatatcatc atagaaaaag gtttatttaa atcttacaga aaaatgcaaa ttcatgttac
     9901 tttagtagat aaacctgggg cattattaca ccttacagac agcttaaaaa tagccaatgc
     9961 aaatatagta aaaatcgact atgatagatt ttctaccaag cttgattatg gcgatgcgat
    10021 gatttcaatt accctagaaa ccaaaggtaa agaacatcaa gaagaaataa gaaaaatttt
    10081 aacccaaaag gcttttaatt tctatgaaag tttttaataa catatacggc ttaaataaag
    10141 cccatttggc ggtgctaaaa agtgattgta ttgcttttta gcctcaatct gttctttgag
    10201 ttctttttca ctcatttttc cttctaaaac ttttaaaacg cttgctacgc ttaatctaat
    10261 ttgccctctt aaaaaaccat tagctttaaa atgaaaaatg ctaaaatctt tataagcata
    10321 agctctagca ataaaaattt ctcttaaagt cgttttatta tcccctccac ttttgcaaaa
    10381 aaactttaaa tccttttttc ctacaaaaaa acccaaaagc tcattagctt tacctaggtc
    10441 aaatttagga taaaaatgta cataagaagc cataaaagga ctataagaag cgtgagaaaa
    10501 tatatagcgg tattctctac tttttacatc aaatcttact tcaaaatcat cttttacttt
    10561 ttcaattttt ttgacatgga taaaaggatg ggaaaattta ttaagttgtt tttgaagata
    10621 ttctaaattt gtaaaatgat ctccacactc cacactagct acagcatagc ttgcatgcac
    10681 tcctttatcc gtgcgtgaag ccattaaaag aggtgaaaaa atacccaaat gcgataagac
    10741 cccacttaaa gcatcttgaa cacctttttt atgaggctga gtagcagaac ctaaaaaagc
    10801 agagccatca taagaaaata taatttttat tttcatcaat aacgactcaa aatcattttc
    10861 ttaaaacaat aagccgaaac aaataaactt aaagaaaaaa ttccaagaca agccaaaatt
    10921 ggaggttgag aaaaaaaact taaaagtcca aaatatatag caatcactcc aaacatacct
    10981 aaatacacat agcctttttc ataacgataa gtaaccaaac caaaacaaag cgcaaaaagc
    11041 gtactagcaa gtggaaacaa ggctatagtt gtataaatca caaattctct tgctctttgt
    11101 ggattttcgt ttaaatcatt ccagtattca taaaatttct ttgtttgaag attgtctgta
    11161 ttaaactgag tatttactac taaagtgtca aattctccac taaaaatact ttgaccttgc
    11221 tcaaaattat acattttgcc ttgattcaag ctaaaagcaa agctatcatc ttttctttgc
    11281 acatgcgctt ctttggctat gataagttgt tctttatcat ctgctttatg tttagggcga
    11341 tacataatta tgttttcata cttatcgcta tcttgttttt ctataaaaat catccagtct
    11401 aaaaattttt gtccaaattc tcctgttttg tagttaaatt tcacttgagt gcttttatag
    11461 tttacaaagt tatcctgaag ttcaaatact ataggtatca ttaccaaagc cacaacaagc
    11521 ataaaagcac taatcaagct tgcaatttta aggaaaaatt ttgccaaaat cattggtgaa
    11581 aatcccaaag taaaaagtac tatactttca ttttccttag aaagcctaaa caaagccaaa
    11641 gttaaagaaa taaaaaaaga tataggcaag gtaaaaatta aaattctggg caacataaat
    11701 ccataaagct ttaaaagatc caaaaaacta atctctatgc ttgaagtaag ttttgcaagt
    11761 tgaataaaaa ataccataga tacaatagca aaaagtacga aaaatataga caaattcgta
    11821 cttaaaaatt gatttaaaac atatcttaaa ctaagcttca ttagaataat cctaagtttt
    11881 tataaaataa aactaccaca aaagcgatat ttaaaaaggg tatcatagca agttcttgct
    11941 cttttattgc tttaatttta aaaaaaataa aaaaaggcaa agttaaaata gaagctataa
    12001 gtaatactaa aaatccatac tcaaaaccta aaattccacc tatacaagac ataatgataa
    12061 tatcagcatc gcccaaattt tctaaaattt catctttttt gtggaaattc attagaaaaa
    12121 aaaccaaact ttttaataaa aaaacaaatc ctccaaaact aaaagcattt agtaaaaaac
    12181 ctccgctaaa ctctttaaaa atcaaaaaat gtaaaatttc actttcccta aaggcgtaaa
    12241 aaaaagcaaa taaaaaagca ctccaaagta aaatttgtgg tacggctttg agtttaatat
    12301 caattaaaga aagtaagaaa agattaaata aaaatagaga taaaaataaa aaatcataaa
    12361 aattttgact taaagaataa accaaaataa gcaaaattat gcctaaaatt tcattgatta
    12421 acaaagaaat aggcaaatga catttacaag tttgacattt tgcctttaaa aaaatataag
    12481 aaaaaatagg aataatttca tagtatttta attttgtatc acaagaaaaa caaaaagagc
    12541 gcgagataaa aaagggtttt ttttcaatta tcctacttgc caaacttgtg caaaaagaac
    12601 ccaaacaagc ccctagaatt attatgaaaa atatcatttt ccaaaagttc tttctctatt
    12661 tctaaattct ttaataatcc ttttaaattc tctcttggta agagatggaa ataaagtttc
    12721 actaaaataa atttcagcat atgaacactg ccaaagtaag aaatttgaaa gtcttttagc
    12781 gtttccaacg cgaagcatca aatccacatc taaaggtaaa tctaaatttt gcgttaaatt
    12841 ttcttcattt agctcaagtt ttttttcaat cacacgctta gcagctctta taatctcatc
    12901 tcttgcacca taacttatag ccaaattaac acaaagtgcg tcacaatgct ttgttttttc
    12961 ttcaactaag gtaatttttt ctcttacttt atcttccaag cgcgataaat cacctatagc
    13021 tcttaaacgc acattatttt tttcaaattt ttctaaagct tcatctaaac aacgatctaa
    13081 aagttcaaag ataaaatcaa tttcatcttt aggacgcttc caattttccg tactaaaagc
    13141 aaaaaggctt aaatttgaaa tattttcttc catgcaaact tccatcaatt tttgcatagt
    13201 tttgactcct tgggaatatc caagctttgc caaaaaaccc ttagctctag cccaccgcct
    13261 attgccatcc ataacaacag caaggtgttt taattcattc atttttcatc ctttaaaatc
    13321 aaaaagcctt ttgaaaacaa acaaaggttc aatcttgttt tcttgagata cattaaaatc
    13381 taaatgttcg tttaaaaatt tttgcacctt ggcaaaaggt gtaaaaacac taatgccttg
    13441 cgagtctatt aaaattttta aagctccaaa aacgctaaaa tataagtaaa tttctaaata
    13501 ttttgctctt ttacgcattt gaaacaagca agatttattt tcaaaaataa aaggaatatg
    13561 ataaatattt tcaaaacttg caaaaagcat ttcttttaat atctgataac gctctatatc
    13621 tttacaatct aaaagatttt gtatgatgaa ttttttataa gaaattttat cctgtaaaat
    13681 agcgattatc aaagccaatc cctcttcaaa aggtttaaaa ttaggacgct ttgaaagatg
    13741 tttaaattgt ataactccac cattttgcat ataaagttca gctaaatatt cagcgccaat
    13801 ttcaagctct atcatgcttt tagtttgaat ctttttgtga tttaacaaaa gcgtataatg
    13861 tccatagcct gatttagcca aaactttcat ttgtataggc aaggtagaat taatcatact
    13921 cataattttt cacaccattt tactaattca aatgccaatt tttctttgct ttgcaaagtg
    13981 cttttatttt cattgtttaa agtgataaaa taaagctcat tttgatcgct tccaaaataa
    14041 tttttttgat caatgatatt aaggcaaacc atatcaagtt gtttatcttt tagagatttt
    14101 ttcgcatttt ctaaggcatt ttgagaatca aattccatct taaaacctat ctttttgcct
    14161 tgaaatttac aagttttaag caaatcttca tttaaagata gatgcaaatt taaaccctgt
    14221 aaatgctcat tttttttaat tttccctttt acactttgag ggataaaatc actcaccgca
    14281 gccgtcataa tcaaaaagtc atgatttaaa tttttatcca aaagctcctt tagatcctta
    14341 gaactttcaa atttgtaaag ctcataaggc gtatcaaatt ccacagagct taaaagtttt
    14401 accctagctc ctaaaaaata aaaagcgtca gctatggcct ttgccatttt tccacttgaa
    14461 aaattactca cacaacgcac atcatcgatc ttttcttttg tgccgccacc tgtgataact
    14521 acacttttat cgcaccaaaa cttttctttt aaaagctctc ttttggtgat attaaaaata
    14581 tccttaactt cagctaaggc tcctacgcct tcatctttac aagctaaaac tttacaaata
    14641 ggctctataa tcaaagcttt attttcttta agtatcttta aagaatttcg cgtgctaaaa
    14701 tgatgaaaca tatttgtatt tgccgcagga gctatgataa gaggtttatt tgctgcgatt
    14761 aaggtttgga taaaaagatt atccgctata ccaaaagcaa gtttattgat agaattaaca
    14821 cttgcagggg caaacaaaac aagatctgca tccttactaa aagctatgtg attgtttgag
    14881 ttttgccaac tttcattttc ctcgcataac acttcatcag ccaaggcttc aaagctcatt
    14941 ttgctagcaa attttaacaa accattagaa agcaaaactt ttaccctaaa accttctttt
    15001 ttaaataaag aaataagctc ataagattta taaaaagcta tactgccact aatggctaaa
    15061 agtatggttt tcatttttga aatttcttat aataataatc ttttatcatt ttatgccctg
    15121 ctctattgat aaacaaagca cctttttcta cattgacact tactgtgctt cctgctgcta
    15181 tgattacttc atcttcgatt tttacaggtg cgataaattg cgtatccgaa cctacaaaaa
    15241 cattttttcc tataatggtt ttatgctttt ttaccccatc ataattacaa gtgatagtcc
    15301 cacagcctat attagttcca ctatctatct cacaatctcc taaataactc aaatgccctg
    15361 cttttacggt atttaacttc gcatttttgc attctataaa atttcctata tgagtgtttt
    15421 ttaactcaca atttggacgc aaatgtgcca aaggccctac atcgctattt tctacgatgg
    15481 aattttctat cacgcttgaa cttttaatga tagagtttat aatcttactt ttgccctcta
    15541 tccttacatt ttcatatact tcacattcac ctacaaattc aacatctgca cctataaaag
    15601 tgctttgcgg taaatgaaaa atcacaccct gttgcatcca gtatttttta attttttctt
    15661 gcatgaaatt ttcagctata ctgagttcaa atttatcatt aatccccata aattcatctt
    15721 catctacaaa aactgcttta atcatcacat ctttttcttt tgctagtttt acaatgtcgg
    15781 ttaaataata ctcttttgcc gcattattgt tatcaatcaa aggtaaaagc tcttttaaaa
    15841 gcctcgagtc aatcacataa accccagcat tgcaagtatt tatctctttt tcttgcgtat
    15901 ttgcatcttt aaattcaaca attttttcaa cgctatcgtt ttttatcacc accctaccat
    15961 aacttttagg atctcttgct ttaaaaactg ctagatttaa ttttgcatta ttactcaaca
    16021 aagcttccaa acttgtttgc tcaaccaaag gcatatcacc acaaagaatc aacactcttt
    16081 catttttagg ctcaaaccca cttaaagctc ccgcagttcc tggataattt tgcaaatctt
    16141 gctctaaaat ttgtgttttt ggaaaatatt ctaaaatttc tttttcaacg cgttcttttt
    16201 gatgcgataa aactacactt acatcatcac ttaaagcaaa agcctttttt aaaatgtgta
    16261 aaatcatact tttttgacaa agctcttgca aaacctttgg cttttgtgat tttattctag
    16321 tgcctaatcc tgccgctaaa atcaaaatag aagttttcat tttttacctt tgttattaag
    16381 aagtctaaaa gactatttta gcagtttaaa gttaaaatcc taataccctt aaactagttt
    16441 ttagtcatca aaagataaaa tttaaatttc tttaataaaa aacaaaaaaa ggtttttaaa
    16501 ttttgaaaaa aatattatta tttttacttt taagcatgag cttatttgct gctgaagcaa
    16561 ctatccctac agtaaattta agcttaagtg cacccaatac acctaatcag cttgttacta
    16621 ctttaaatat agtgattgtt ttaaccatac ttgcgctcgc tccaagtata gtttttgtta
    16681 tgacttcttt cttgcgtctt attgtagtat tttcattttt acgacaagct atggggacgc
    16741 aaagtatgcc acctaacact attttggtaa ccttggcttt aattttaact ttttttatca
    16801 tggaacctgt agctacaaaa tcctataatg aaggtataaa accttattta gcagaaaaaa
    16861 taggctatga agaggctttt ataaaaggag caaagccttt taaagatttt atgcttaaaa
    16921 atactcgcga aaaagattta gccctttttt atcgcatacg caatctacct aatcccaaaa
    16981 ccatagatga tgttcccctt acggttttag ttcctgcttt tatgatttca gagcttaaaa
    17041 ccgcttttga aatagggttt ttaatctacc tgcccttttt agtcatagat atggttgtaa
    17101 gctcagtttt aatggctatg ggtatgatga tgctacctcc tactatgatc tctttacctt
    17161 ttaaactctt aatttttgta ttagtggatg gatggaattt gctagtgcaa aggcttgtgg
    17221 aaagctttgt aacctaagaa ggaaaatcct tcttagaaaa agaattctaa attattcttt
    17281 ttaaaagtat ctttaacatc tttaagatat ttctctccta aagaatcaaa aagcccatct
    17341 tttttgcttt ctgcaataaa ttcatcaagc tcttttttaa gttctgcatt gcctttttgt
    17401 actgctatac cccaaaactc aggattttct tgaaaaggtg ccaaaatggc tctagttgta
    17461 tcttgatgtt tttgccaagt gcgataaatc gtaagttgat cataaaaaaa tccatcagcc
    17521 ttaccttgaa tcacttccaa aatagcagca ttttctttat caaataaatt aatagttgca
    17581 ttttttaaat ttttaaccgc atataaatgt cctgtagagc cacgctttaa agccaaaact
    17641 ttgccctttt tatctaaatc tttgatattt gtaatatcag agttcaaagg agttaaaata
    17701 gccaaatttg ccttagcata aggaatgcta aaatccacca ctttctttct ctcatcggta
    17761 attgtcatag aggacataat aagatctatc ttggctgttt ttaaagcagg tattaaacca
    17821 tcccaagcga tattttttac tacaagttta tagccgtttt tctttgcaaa agcttctaaa
    17881 aaatccacgc taattccact tgctttgcct gttttatcgc tcatttcaaa aggcggatat
    17941 ccaagctcca ttcctacaac caaatctttt gcactcaaat ttaaagcaaa aaaagagata
    18001 aaaatcaaaa taattttttt cataatttcc tttcaaaatt ttttgtaaaa aaattatact
    18061 aattttatct tattttgtta ttagcaattt gtttcaaact taaaaaatta aaacttctaa
    18121 accctagtct gccctataag attattaagt ctatccatta tattatttac aaaagaattt
    18181 atactttcat tacttgcttt ccaaccatta gcttttgctt gatgaaattc tctatcaaaa
    18241 gagattccac tgcctacgta tacattttgc catttaactc ctttttccat tgcatatata
    18301 cctgcatcaa gccagccatc ttgtgcatag ccttttaaca aacttgcaaa atctactttg
    18361 cctgtcatga tgtcgtctaa ggaaatatca aaagaaggat ttgctttcat ttcttgctta
    18421 cgttgtgctt ccaaaacttt tgcttcagga cttaaaacaa cttgatttga agatggaaaa
    18481 ggcggataag actttaaaaa actcataaac aaagcttctt tagaataact tccatcttca
    18541 ttttgtggat aaactgacat atcaggatta aagtcacctt caattgaagg atcttgctcc
    18601 atactttgtg gggaaaagtc aagtttcata aggttcatat ccaaacccat agtagaatat
    18661 ttaatcgctt gtgcttcgtg aaattgttct gcattgaata tattttttac aattttttca
    18721 ttgtcttcat tattaatata atttaatcct tttggtaatt gctctaaatc tgctttgcta
    18781 aaacttgttt tatcatttgg aaatgctctt attacttgat taaagctatt ataataggat
    18841 ttaacaatag aagccatatc aaaactatta taatagtttc cactagtttc atcagccata
    18901 ccattttgat taaatctttc
//
LOCUS       DAPIWB010000035        18369 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.036, whole genome shotgun sequence.
ACCESSION   DAPIWB010000035 DAPIWB010000000
VERSION     DAPIWB010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18369)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18369)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18369
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.036"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            34..468
                     /locus_tag="RJ266_000979"
     CDS             34..468
                     /locus_tag="RJ266_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002876868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7354737.1"
                     /translation="MFDFFKPKAKAIKFPKEEILPRYYKMRTWSLSGVFIGYMGYYLV
                     RNNITLSTPFIQNQLDLSKSDIGTITGSMLIAYGISKGAMSVISDKADPKKYMALGLI
                     LCALVNVLLGFSNSFYAYVGFVIALGVFQGMGVGPSFITLTN"
     gene            511..1182
                     /locus_tag="RJ266_000980"
     CDS             511..1182
                     /locus_tag="RJ266_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7354738.1"
                     /translation="MSHNIGGGIVAPIVSLSGFALAALLGVSMANFNETYWHMNHFYT
                     PAACAVIISLYALYAVKGNPKNEGLVDITEINEMRGIKTEEIKAIETPNLSSFEIFYH
                     YVLKNKNAWYVAWMDTFIYMVRFGLISWLPIYLLETKGFNKEQMGIAFWLFEWAAIPS
                     TLLAGYISDKIFKGYRMPPAIGAMVIIFFMIIGYFTSNNLYMVIFFAAMAGCLVYIPQ
                     FLASV"
     gene            1186..1404
                     /locus_tag="RJ266_000981"
     CDS             1186..1404
                     /locus_tag="RJ266_000981"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354739.1"
                     /translation="MEVVPAFAVGSCVGLRGFMSYVVGASLGTKAIGWAVDYYGSWNA
                     GLIMLLSACILCILCSTLCHFSAKKKHQ"
     gene            1546..2298
                     /gene="peb3"
                     /locus_tag="RJ266_000982"
     CDS             1546..2298
                     /gene="peb3"
                     /locus_tag="RJ266_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AcfC family glycoprotein adhesin PEB3"
                     /protein_id="HDV7354740.1"
                     /translation="MKKIITLFGACALAFSMANADVNLYGPGGPHTALKDIANKYSEK
                     TGVKVNVNFGPQATWFEKAKKDADILFGASDQSALAIASDFGKDFNVSKIKPLYFREA
                     IILTQKGNPLKIKGLKDLANKKVRIVVPEGAGKSNTSGTGVWEDMIGRTQDIKTIQNF
                     RNNIVAFVPNSGSARKLFAQDQADAWITWIDWSKSNPDIGTAVAIEKDLVVYRTFNVV
                     AKEGASKETQDFIAYLSSKEAKEIFKKYGWRE"
     gene            2395..3489
                     /locus_tag="RJ266_000983"
     CDS             2395..3489
                     /locus_tag="RJ266_000983"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HDV7354741.1"
                     /translation="MKTFLVCALEPSANLHLKEVLKAYKKDFGEFELHGIYDESLCKE
                     FDLNSKPLYSSHEFSAMGFIEVLPLIFKAKKAIKELVNLTLSQTMDAVLCIDSPAFNI
                     PFAKALKKAGSKIPRIYYILPQVWAWKKGRIPIIESHFDILASILPFDNQFFNKSTYI
                     GHPLLDEIKEFKNQEDINHTFSKKDDEKTIAFLPGSRRSEIRRLMPIFKELSQKFKGE
                     KILCVPSFNLEKLEVYGDISEFKIESNTPKVFKKADFAFICSGTATLEAALVGTPFVL
                     AYKAKAIDIFIAKLFVKLKHIGLANIFCDFAGKEALNPEFLQDKVNVLNLYEAYNKYD
                     YKAFFAKVDFLKEYLQFGSAKNLAKILNEI"
     gene            3501..3986
                     /gene="greA"
                     /locus_tag="RJ266_000984"
     CDS             3501..3986
                     /gene="greA"
                     /locus_tag="RJ266_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HDV7354742.1"
                     /translation="MQKEPMSQFGYDKLAAELKDLKDNQRPAVVIEIDTARSHGDLKE
                     NAEYHAAREKQALIESRIAELSDLLARAQVIDPSSYEHDSVKFGSSVVIMDLDTEKES
                     KYTLVGICEGNLDKGYISIASPIAKAMLGKKEGDDFKVRLPKGESEFEILSINYEPLK
                     F"
     gene            4137..4754
                     /locus_tag="RJ266_000985"
     CDS             4137..4754
                     /locus_tag="RJ266_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HDV7354743.1"
                     /translation="MLIGEISATHEFAKPYIELLEELALKIEIIYLEGNHDFNLSCFF
                     KRVKIFNLQEQPIKLNLHTSKGNNLVLNNAFIKLAHGDIFLPPLLQFTLKTLRNHYLL
                     VFLNFLNIITRNFISNKILQNQNKKNLFYQIKDFENLAKKRYEKYENLGFWVCEGHYH
                     QNHQINKENIKYLNLASFAYERSFFVVEYQQEIKFREQKLRGQNV"
     gene            4747..5703
                     /locus_tag="RJ266_000986"
     CDS             4747..5703
                     /locus_tag="RJ266_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheV"
                     /protein_id="HDV7354744.1"
                     /translation="MFDENIVKTGSNEMELVDFRIFKQGHDKVYEGIYGVNVSKVREI
                     IKIPSLTELPGVPDYIEGIFDLRGVVIPVVNLAKWMQITEPESTMLKPRVIITEFSNI
                     LIGFIVHEAKRIRRINWKDIEPATFSTGSGALDKGKITGVTRIENDEVLLILDLESVV
                     EDLGIYAPKTDIDFGKIEKFTGTALILDDSMTARKRVKEMMQQMGFQVVEAKDGVEGI
                     NKLEELSQIYGESLNDTLKIIVSDVEMPQMDGFHFAARIKEDPRFKDIPIVFNSSLSN
                     EFMNEKGVQEAGGEGYLVKFNASDFFNEIAKVIKKHQSQEQG"
     gene            5707..8016
                     /locus_tag="RJ266_000987"
     CDS             5707..8016
                     /locus_tag="RJ266_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDV7354745.1"
                     /translation="MEDMQEILEDFLVEAFELVEQIDHDLVELESNPEDLELLNRIFR
                     VAHTVKGSSSFLNFDVLTKLTHHMEDVLNKARHGELKITPDIMDVVLESIDRMKTLLN
                     SIRDNGNDTAIGMDIEPICARLTAISEGESPVVATDSNEKSTPQAELEAPKQEIATPE
                     PEVDVNQLSDSEVEAEIERLLKVRKAEDQARRAQKKQTTNAAPKPTNNTANKPTESGE
                     KKVPASGSNASSMDQTIRVEVKRLDHLMNLIGELVLGKNRLLKIYDDVEERYEGEKFL
                     EELNQVVSQLSIITTDVQLAVMKTRMQPIAKVFNKFPRVVRDLSRELGKQIELEITGE
                     ETELDKSIVEEIGDPIMHMIRNSCDHGVEDPATRAANGKPEKGIVQLKAYNEGNHIVV
                     EITDDGKGLDPNGLKAKAIEKNLITEREADQMTDKEAFALIFKPGFSTAAKVTNVSGR
                     GVGMDVVKTNIEKLNGVIEIDSELGKGSSFKLKIPLTLAIIQSLLVGTQEEFYAIPLA
                     SVLETVRVPIDDIYTIEGKNVLRLRDEVLSLVRLSDVFGVKQVLESGDQTYVVVIGVA
                     ESKLGIIVDTLVGQEEIVIKSMGDYLQNIQGIAGATIRGNGRVTLIIDVGAMMDMAKE
                     IKVDIKAQLESSAKKPKEQPSDYKVLIVDDSKMDRTLMQKALEPLGVSLIEATNGVEA
                     LNIIKSGEHDIDAMLIDIEMPRMDGYTLAGEIRKYSKYRNLPLIAVTSRTSKTDRLRG
                     VEVGMTEYITKPYSPEYLENVVRKNLKLG"
     gene            8021..8542
                     /locus_tag="RJ266_000988"
     CDS             8021..8542
                     /locus_tag="RJ266_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-binding chemotaxis protein CheW"
                     /protein_id="HDV7354746.1"
                     /translation="MSNEKLEQILQKQQTQMAGPDVDQREDDIIQLVGFVVGDEEYAI
                     PILNIQEIIKPIEYTRVPSVPDYVLGVFNMRGNVMPLIDLAQRFHLGSSKMTPQTRYI
                     VLRGETNGTGVGGNAGFVIDRLTEAIKIHRNRIDPPPETLVKDKGMIYGIGKRDENIL
                     TILKVEALLKREF"
     gene            8542..9165
                     /gene="serB"
                     /locus_tag="RJ266_000989"
     CDS             8542..9165
                     /gene="serB"
                     /locus_tag="RJ266_000989"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HDV7354747.1"
                     /translation="MIKLCVFDFDATLMDGETIDILATAHGKGNQTSEITRHAMTGEL
                     DFFESLQKRVSFLKGMSYKKVLELGSTLPLMHGAHELIQYLKSKNIQIVIFSGGFHEG
                     IDPAMQKLGISLGFANYLHHKNDILTGLVGGEMMFSNSKGLMLQRLKSFLNLKTDEVM
                     CVGDGANDLAMFNESGLKIAFCAKEILRSKADICIDIKDLKEIIKVI"
     gene            9165..10142
                     /locus_tag="RJ266_000990"
     CDS             9165..10142
                     /locus_tag="RJ266_000990"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HDV7354748.1"
                     /translation="MKNFSLWCDFIENSFLDNEFLNLLSHGINGATSNPAIFKNAILN
                     SPIYKDKILKLKGKKTKDIYEELAISDIQKAADKLAPLFYQKNDGFISIEIDPRLHDN
                     TTLSLGEAKRLYSAISKENVMIKIPATKASYEVMYELMKNGISVNATLIFSLEQSQKC
                     FEALNAGLVEFRKNNIALKEQNTRTPQAVISIFVSRFDRLLNPKAKEQNRIGILNANL
                     AYNNIYSKNEPNIRALFASTGVKGDDLPKDYYIKELLFENSVNTAPLDAIEAFKGKMH
                     FKKPLMNFEIYTELNQIISQSEREKACNDLLSDGLEQFCIAFEDILKAL"
     gene            complement(10143..10565)
                     /locus_tag="RJ266_000991"
     CDS             complement(10143..10565)
                     /locus_tag="RJ266_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5 YciO YrdC YwlC family protein"
                     /protein_id="HDV7354749.1"
                     /translation="MIYLAQTDTTVGFLSKNLEEINALKGRDKNQPCLITSAKFCELK
                     SLARIPKSFKNLVRRSKKTTFIYPNNQAIRIVKECKHANFLSKNGYFYSSSANKHGKE
                     FDEEWARSVADIILDEKFFENIPSKILKLSKNKMIKIR"
     gene            complement(10562..13831)
                     /gene="carB"
                     /locus_tag="RJ266_000992"
     CDS             complement(10562..13831)
                     /gene="carB"
                     /locus_tag="RJ266_000992"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HDV7354750.1"
                     /translation="MPKRTDIKSILLIGSGPIVIGQACEFDYSGTQAAKTLKELGYRV
                     VLINSNPATIMTDPEFADATYIEPITKESILSIIKKEKIDAILPTMGGQVALNVAMEV
                     YESGLLGDVKFLGANPEAIKKGEDRQVFKECMKKIGMDLPKSMYAYNYDEALKAADEI
                     GFPLMIRASYTLGGAGSGVVYNMDEFKELANTALALSPIHEILIEESLLGWKEYEMEV
                     IRDRADNCIIVCSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFAILREIGVD
                     TGGSNVQFAINSKNGRMIVIEMNPRVSRSSALASKATGYPIAKVATLLAVGFSLDEIK
                     NDITGTPASFEPVIDYIVTKIPRFTFEKFPGANTTLGTAMKSVGEVMAIGRTFKESIQ
                     KALCSLERSLSGFDRVKFEDRNDLVFKIRNANEKRLLYVAQAFREGFSVEELYELCKI
                     DPWFLTQIKEIVDFEEQIDMDILNNKALLRKAKTMGFSDKMIALLVNLKDNLELSQND
                     IYYARMKQKIIAEFSEVDTCAGEFEALTPYLYSSINVSELTQSKNDAKDKKEKKVMII
                     GGGPNRIGQGIEFDYACVHASFALKDMGIKTIMYNCNPETVSTDYDTSDILYFEPIDF
                     EHLRAVIEREKPDGVIVHFGGQTPLKFAKRLSAFGAKIIGTSARVIDVAEDRKKFAEF
                     ITKLGINQPKNSTATSVEEAVLKASDIGYPVLVRPSYVLGGRAMRVVNDEAELRLYMQ
                     EAVDVSDKSPVLIDQFLDNATEIDVDAICDGKDVYVAGIMEHIEEAGIHSGDSACSLP
                     PCNIDEKMQEFIAQKTADIALNLGVVGLLNIQFALHNNELYMIEVNPRASRTVPFVSK
                     ATGIPLAKVATRVMWQGNLKEALKFYDTFKVVNFDTKILRPKTPKYMSVKEAVFPFAK
                     LSGSDLELGPEMRSTGEVMGISKDFANSYAKSQIASFNHLPEQGVVFISLKDKDKKYT
                     KKIAAEYVKLGFKLMATGGTCKEILESGFECELVHKISEGRPNVEDKLKNGEIHLVIN
                     TSDSHSFKGDTKKIRENIIRFKIPYFTNLRSALAGAKSIKAIQSKSCLDVKSLQEWLK
                     S"
     gene            complement(14092..14841)
                     /gene="mreC"
                     /locus_tag="RJ266_000993"
     CDS             complement(14092..14841)
                     /gene="mreC"
                     /locus_tag="RJ266_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HDV7354751.1"
                     /translation="MKNKIFYVLVLAFLVFISFYYGGLIKQNVLRVNDFVVGNFYNIK
                     DYLGKKISEHFNQANQIQQLKTRNKELEDIAVKVTSFANQLNRILEDQNSTKYLPQVS
                     LTRVISYVQLNDYKKLWLDWSKIPVGKNRGLIYQGYTAGIAINKNGRAMALLQGDDQC
                     VFSVYIGKSKAPGLIQGEDGRIVVKFIPKWAKINTGDEILTSGLDNIFFSDIPVGIVN
                     RVNDEDMYQSVEVKPYVKISIPAYLYVVDNL"
     gene            complement(14831..15871)
                     /locus_tag="RJ266_000994"
     CDS             complement(14831..15871)
                     /locus_tag="RJ266_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HDV7354752.1"
                     /translation="MILDQLIGFFSSDMGIDLGTANTLVLVKDKGIVINEPSVVAVER
                     ERYGSKAKILAVGKEAKDMVGKTPGNIEAIRPMKDGVIADFDMTEKMIRYFIEKTHRR
                     KSFLRPRIIISVPYGLTQVERKAVRESALSAGAREVFLIEEPMAAAIGASLPIQEPKG
                     NLVVDIGGGTTEIGVISLGGLVISKSIRTAGDKLDMSIVNYVKEKYNLIIGERTGEEI
                     KITIGSAIQLPKELSMVVKGRDQVSGLLSRIELTSEDVREAMREYLKEIADALKMVLE
                     MMPPDLASDIVENGVVLTGGGALIRGFDKYLSEIVRLPVYIADEPLLAVAKGTGKALE
                     EISLLQQLTNEE"
     gene            complement(15883..17106)
                     /gene="clpX"
                     /locus_tag="RJ266_000995"
     CDS             complement(15883..17106)
                     /gene="clpX"
                     /locus_tag="RJ266_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HDV7354753.1"
                     /translation="MPRKCSFCNEVENPQRRILANENDDAFICEYCVEGAYSIIYGEE
                     KEFKEPKQSHNTEFKDITPKELKAYLDRYVIGQDRAKKVFSVGVYNHYKRLFKAELQD
                     DDTELFKSNILLVGPTGSGKTLLAQTLAKFLDVPIAICDATSLTEAGYVGEDVENILT
                     RLLQAADGDVQRAQKGIVFIDEIDKIARMSENRSITRDVSGEGVQQALLKIIEGSLVN
                     IPPKGGRKHPNQEFIQIDTSNILFVCGGAFDGLETILKRKLGDKVVGFFDDAKEENKA
                     LLEKIEPDDLVHFGLIPELIGRLHVIASLNELNEEDMVRILTEPKNAIIKQYQKLFAI
                     DGVNLKFEEDALRAIAQLALERKTGARGLRSIIEEMMVDLMFELPEYKNYDIVITKEV
                     VKDNAKALLIKRKIS"
     gene            complement(17099..17890)
                     /gene="lpxA"
                     /locus_tag="RJ266_000996"
     CDS             complement(17099..17890)
                     /gene="lpxA"
                     /locus_tag="RJ266_000996"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HDV7354754.1"
                     /translation="MKKIHPSAVIEEGAQLGDDVVIEAYAYVGKDTKIGNDVVIKQGA
                     RILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINSGTAKG
                     DGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFV
                     KVGEGCMIAGASALSQDIVPFCLAEGNRASIRSLNLVGIRRRFDKDEVDRLSRAFKTL
                     FRQGDLKENAKNLLENQESENVKKMCHFILETKRGIPVYRGKNNA"
     gene            complement(17890..18330)
                     /gene="fabZ"
                     /locus_tag="RJ266_000997"
     CDS             complement(17890..18330)
                     /gene="fabZ"
                     /locus_tag="RJ266_000997"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HDV7354755.1"
                     /translation="MIDVMQIQEILPHRYPFLLVDKITELKVKEVVRGYKNISISDHV
                     FMGHFPGHPIYPGVLILEGMAQTGGVLAFESMEDKVDPKSKVVYFTGIDGAKFRNPVR
                     PGDRLDYEMSVVKNRGNMWIFKGQAFVDGNLVAEAELKAMIVDK"
BASE COUNT         6281 a         3085 c         2876 g         6127 t
ORIGIN      
        1 taaaaatata aagttagtaa ggagggttta aatatgtttg attttttcaa acctaaagca
       61 aaagctatta aatttcctaa agaggaaatt ttacctagat attacaaaat gagaacttgg
      121 agtttaagtg gggtttttat aggatatatg ggatattatc ttgtgcgaaa taatatcact
      181 ctttcaactc catttataca aaatcaactt gatctcagta aatcagacat cggaacaatc
      241 acaggctcaa tgcttatagc ttacgggatt agcaaaggtg caatgagcgt tataagcgat
      301 aaagctgatc ctaaaaaata catggcttta ggtcttattt tatgtgctct tgtaaatgtt
      361 ttacttggtt tttcaaattc tttttacgct tatgtaggtt ttgttatcgc gcttggggtt
      421 tttcaaggta tgggggtagg tccttctttt atcactctta caaactgata tcctaaaaaa
      481 gagcggggaa tttacacggc cgtttggaat atctcacata atataggagg cgggatagtt
      541 gctcctatag tttcgctttc aggttttgct ttagcagcat tattgggtgt gagtatggca
      601 aattttaacg aaacatattg gcacatgaat catttttaca ctcctgctgc ttgtgcagtt
      661 atcattagtc tttatgcgct ttatgcagtt aaaggaaatc ctaaaaatga aggtttggtt
      721 gatattactg aaatcaatga aatgcgaggg attaaaacag aagaaatcaa agctatagaa
      781 actccaaatt taagcagttt tgaaattttt tatcattatg tacttaaaaa caaaaatgct
      841 tggtatgtgg cttggatgga tacttttatt tatatggtgc gttttgggct tatttcttgg
      901 cttcctattt acttgctaga aacaaaaggc tttaataaag aacaaatggg tattgccttt
      961 tggctttttg aatgggctgc tataccttct actttacttg caggatatat ttcagataaa
     1021 atttttaaag gctatagaat gcctcctgct ataggcgcca tggtgattat tttctttatg
     1081 attattggat attttacttc aaataatctt tatatggtta ttttctttgc agctatggcg
     1141 gggtgtttag tctatatacc acaattttta gcaagtgtgt aaactatgga agtcgttcct
     1201 gcttttgcag taggatcttg tgtaggactt cgtggcttta tgagttatgt agtcggcgct
     1261 tcacttggaa caaaagctat aggttgggct gtggattact atggtagttg gaatgctggt
     1321 cttatcatgc tccttagtgc ttgtattctt tgtatacttt gttctacttt atgtcatttt
     1381 agcgctaaaa agaagcatca ataacaattt taacttttgc ttgcaaaaat accaagcaaa
     1441 agttagattt taataatatt tttgttacat tataactatt tattaacata taatttctaa
     1501 aatcttacct tcaatcaata aaaatttatc ataaaaggaa atactatgaa aaaaattatt
     1561 actttatttg gtgcatgtgc cttagctttt agtatggcaa atgcagatgt aaatctttac
     1621 ggaccaggtg gcccacacac ggccttaaaa gatatagcaa acaaatatag cgaaaaaaca
     1681 ggcgttaaag taaatgtaaa ttttggccct caagcgactt ggtttgaaaa ggctaaaaaa
     1741 gatgcagata ttttatttgg cgcttcagat caatcggctt tagctatagc gagtgatttt
     1801 ggaaaagatt ttaatgtgag taaaatcaag cctttatatt ttagagaagc catcatactt
     1861 actcaaaaag gcaatccttt aaaaatcaaa ggtttaaaag atttggctaa taaaaaagta
     1921 agaatcgttg tgcctgaagg tgctggaaag agcaatactt ctggaactgg agtttgggaa
     1981 gatatgatag gtagaactca agatataaaa accatacaaa attttagaaa caatatcgtg
     2041 gcctttgttc caaatagtgg aagtgcaaga aagcttttcg cacaagatca agccgatgct
     2101 tggatcactt ggattgactg gtcaaaaagc aatcctgata taggaactgc cgtagctata
     2161 gaaaaagatt tggttgttta tagaactttt aatgtggtag ctaaagaagg tgcgagcaaa
     2221 gaaacacaag attttattgc ttatttaagt tctaaggaag ctaaagaaat ttttaaaaaa
     2281 tacggctgga gagaataaat cttcatacac gctttttagc gtgtattctt ccataacttc
     2341 ttttaattaa gccaaaataa gataaaatgt ttaaaatatt gataaggaaa ttttttgaaa
     2401 acctttttag tttgtgcttt agaaccttca gcaaatttgc atttaaaaga agttttaaaa
     2461 gcttataaaa aagattttgg tgaatttgaa cttcatggga tttatgatga gagtttatgt
     2521 aaggaatttg atttaaattc taaaccactt tatagctcac atgaatttag tgctatgggt
     2581 tttatagaag ttttaccttt gattttcaaa gcaaaaaaag cgatcaaaga attagtgaat
     2641 ctaactttaa gccaaacaat ggacgcagtt ttatgtatcg attctcccgc ttttaatatc
     2701 ccttttgcca aggctttaaa aaaagcaggc agtaaaattc cacgcattta ttatatcttg
     2761 cctcaagttt gggcgtggaa aaaaggtcgc atacctatca tagaaagtca ttttgatatt
     2821 ttagcttcta ttttgccctt tgataatcaa ttttttaaca aaagcaccta tataggccat
     2881 ccgcttttag atgagataaa agaatttaaa aatcaagaag atattaatca tacattttca
     2941 aaaaaagatg atgaaaaaac tatagccttt ttaccaggtt caaggcgtag tgaaattagg
     3001 cgtttaatgc ctatttttaa agaactttct caaaaattta agggtgaaaa aattctttgc
     3061 gttccctcat ttaatcttga aaaattagaa gtttatggtg atattagcga atttaagata
     3121 gaaagtaaca ctccaaaagt gtttaaaaaa gctgattttg cctttatttg tagtggaaca
     3181 gctactttag aagcagcttt agtgggaact ccttttgttc ttgcttataa ggcaaaggct
     3241 atcgatattt ttatcgcaaa actttttgta aaattaaaac atataggact tgcaaatatt
     3301 ttttgtgatt tcgctggaaa agaagcttta aatcctgaat ttttacaaga taaagtcaat
     3361 gttttaaatt tatatgaagc ttacaataaa tatgattata aggcattttt tgctaaagtt
     3421 gattttttaa aagaatattt acaatttgga agtgctaaaa atttagcaaa aatcctaaac
     3481 gaaatataaa aggataaatc atgcaaaaag aaccaatgag tcaatttggc tatgataagt
     3541 tagccgcaga attaaaagat ttaaaagaca atcaacgccc tgccgttgta atagaaatcg
     3601 atacagcaag aagtcatggg gatttgaaag aaaatgctga ataccatgct gcaagagaaa
     3661 agcaagcttt gatagaaagt cgtattgcag agcttagtga cttgctagca agagctcaag
     3721 tgatcgatcc ttcaagctat gagcacgata gtgtgaaatt tggttcaagt gttgtgatca
     3781 tggatttgga tacagaaaaa gaaagcaaat atactctagt aggaatttgc gaaggaaatt
     3841 tagataaggg ttatatttcc atcgcatctc caatagcaaa agctatgctt ggaaaaaaag
     3901 aaggagatga ttttaaagtg cgtttgccaa aaggtgaaag tgaatttgaa atcctttcta
     3961 taaattatga gcctttgaaa ttttaaggat aaaaaatttt actacaaaat ggagcgattt
     4021 taatcgcaga tgctcatgaa aatgaacaaa gaaagggatt ttgggaattt ttacaagcct
     4081 taaaaaaagg taaaatttcc acccctcaac tcatacttat gggtgatatt ttcgatttgc
     4141 ttataggcga aatctctgct acacatgaat ttgctaaacc ttacatagaa cttttagaag
     4201 aattggcctt aaaaattgaa attatctact tagaaggcaa tcatgatttt aatctttctt
     4261 gtttttttaa aagggtaaaa atttttaact tacaagagca gcccataaag cttaatttgc
     4321 atacaagtaa aggtaataat cttgttttaa ataatgcttt tataaaatta gctcacggag
     4381 atattttttt accacctctt ttacaattta ctctgaaaac attaagaaat cattatttgc
     4441 ttgtattttt gaatttttta aatattatta ctcgtaattt tatttcaaat aaaattcttc
     4501 aaaatcaaaa caaaaaaaac cttttttatc aaataaaaga ttttgaaaat ttagcgaaaa
     4561 aaagatatga aaaatatgaa aatttaggat tttgggtatg tgaaggacac tatcatcaaa
     4621 atcatcaaat caacaaagaa aacattaaat atcttaactt agctagtttt gcatatgaga
     4681 gaagtttttt tgtagtagaa tatcagcaag aaatcaaatt tcgagaacag aaattgaggg
     4741 gtcaaaatgt ttgatgaaaa tatcgtgaaa acgggttcaa atgaaatgga gcttgtcgat
     4801 ttccgtatat ttaagcaagg gcacgataaa gtctatgaag gaatttatgg tgtaaatgtt
     4861 tctaaggtaa gggagattat aaaaatccca agccttacag aacttccagg tgtacctgat
     4921 tacatcgaag gtatctttga tcttcgtgga gtggttatac ctgtagtcaa tcttgccaaa
     4981 tggatgcaaa tcactgagcc agaaagcact atgctaaaac ctagagttat tattactgaa
     5041 tttagcaata ttcttattgg ttttatagtt cacgaagcaa aaagaattcg tagaataaac
     5101 tggaaagata tagaaccagc aactttttct acaggatcag gtgctttaga taaaggtaaa
     5161 attacaggtg taacacgcat tgaaaatgat gaagtgttgc taattttaga tcttgaaagt
     5221 gttgttgaag atttaggaat ttacgctcca aaaacagata tagattttgg aaaaatagaa
     5281 aaatttactg gaacagcact tatacttgat gacagcatga ctgctagaaa acgcgtcaaa
     5341 gaaatgatgc aacagatggg ctttcaagtt gttgaagcta aggacggcgt agagggcata
     5401 aacaaattag aagaattaag ccaaatttat ggtgaaagtt taaacgatac tttaaaaatt
     5461 atagtaagcg atgtcgaaat gccacaaatg gatggtttcc actttgctgc acgcattaaa
     5521 gaagatccaa gatttaaaga tattcctata gtctttaact catctttatc aaatgaattt
     5581 atgaatgaga aaggtgttca agaagctggt ggagaaggct atcttgtcaa atttaacgct
     5641 agcgatttct tcaatgaaat tgcaaaggtt attaaaaaac atcaatctca agaacagggg
     5701 taaaatatgg aagatatgca agaaatactt gaagactttt tggttgaagc ttttgagctt
     5761 gttgagcaaa tcgaccatga tttagtagag cttgaatcaa atccagaaga tttagaatta
     5821 ttaaatagaa ttttccgtgt tgcacatacg gttaaaggat catcaagctt cttaaatttt
     5881 gatgttttaa caaagttaac tcaccacatg gaggatgttt taaacaaagc aagacatggc
     5941 gagttaaaaa taactccaga tatcatggat gtggttttag agtctattga tagaatgaaa
     6001 actttactta attccattcg tgataatggc aacgatactg ctattggtat ggatatagaa
     6061 ccaatttgcg caagattaac agctatttca gagggagagt ctcctgttgt ggcaacagat
     6121 tcaaatgaaa aatctactcc acaagcagaa ctagaagcac caaaacaaga aatagctact
     6181 ccagaacctg aagtagatgt taatcaatta agtgattctg aagttgaagc tgaaatagaa
     6241 agacttttaa aagttagaaa agctgaagat caagctcgtc gcgcacaaaa gaaacaaaca
     6301 acaaatgcgg cacctaaacc gactaacaat acagcaaata aacctacgga aagtggagag
     6361 aaaaaagttc ctgcttcagg tagtaatgct agcagtatgg atcaaaccat acgcgtggag
     6421 gtaaaaagat tagatcactt aatgaatcta attggggagc ttgttttagg caaaaaccgt
     6481 ttgcttaaaa tttacgatga tgttgaagag cgttatgaag gagaaaaatt ccttgaagaa
     6541 cttaatcagg ttgtaagtca attaagtatt attacaactg atgttcagct tgctgtgatg
     6601 aaaacaagaa tgcaacctat agcaaaagtt ttcaataaat tcccaagagt tgttcgtgat
     6661 ttaagtcgtg aattaggaaa gcaaatagaa cttgaaatta caggtgaaga aactgaactt
     6721 gataaatcta tcgtagagga aattggcgat cctatcatgc atatgattag aaattcatgt
     6781 gatcatggtg ttgaggatcc agcaactcgt gcagcgaatg gaaaacctga aaaaggtata
     6841 gtccaactta aagcttataa tgagggcaat cacatcgttg tagaaattac agatgacggt
     6901 aaaggacttg atccaaatgg cttaaaagca aaagctatag agaaaaattt gattaccgaa
     6961 agagaagcag atcaaatgac agacaaagaa gcttttgctt tgattttcaa gcccggtttt
     7021 tcaactgcgg ctaaagtaac aaatgtttca ggtcgtggtg taggaatgga tgttgttaaa
     7081 accaacatcg aaaaacttaa tggggtaatt gaaattgata gtgagttagg taaaggaagt
     7141 tcatttaaac ttaaaattcc tcttaccttg gcaatcattc aatctttact tgtaggaact
     7201 caagaggaat tctatgcaat tccacttgca agcgttcttg aaacagttag agtgccaatt
     7261 gatgatatct atactatcga aggtaaaaat gtattacgct taagagatga agtgctttct
     7321 cttgtgagac tttcagatgt atttggagtt aaacaagtcc ttgaaagcgg tgatcaaact
     7381 tatgtcgttg ttataggggt agcagaaagc aagcttggta ttatagtaga tactcttgta
     7441 ggacaagaag aaatagttat taaatctatg ggtgattatt tacaaaatat ccaaggtata
     7501 gcaggagcta caatccgtgg taatggtaga gtgacattaa tcattgatgt aggtgctatg
     7561 atggatatgg ccaaagaaat taaagttgat attaaagcgc aattagaatc aagtgccaaa
     7621 aaacctaaag aacaaccaag tgactataaa gtcttaattg tagatgattc taaaatggat
     7681 agaactttaa tgcaaaaagc tttagaaccg ctaggagtta gtttaatcga agcaacaaat
     7741 ggtgttgaag cattgaatat tataaaatct ggcgaacatg atattgatgc aatgcttata
     7801 gatatcgaaa tgccaagaat ggatggatac accttagctg gtgaaattag aaagtattct
     7861 aaatatcgca acctaccatt gatagcagtt acttcaagaa caagtaaaac tgaccgttta
     7921 agaggtgttg aagtgggtat gactgaatat atcactaaac cttattctcc agaatacttg
     7981 gaaaatgtgg ttagaaaaaa tttgaaacta ggataagaat atgagtaatg aaaaattaga
     8041 gcaaattttg caaaaacagc aaactcagat ggctggtcct gatgtcgatc aaagagaaga
     8101 tgatatcatc caacttgttg gctttgtagt tggagatgag gaatatgcga ttccaattct
     8161 taatatacaa gaaatcatca aacctataga atatactaga gttcctagtg tacctgatta
     8221 tgttctaggg gtttttaata tgcgtggtaa tgttatgccg ctcattgatc tagctcaacg
     8281 ctttcattta ggaagttcta aaatgacacc tcaaacaaga tatattgttt taagaggtga
     8341 gacaaatgga actggagttg gaggaaatgc tggttttgtt atagatagat taactgaagc
     8401 aattaaaatt cacagaaaca gaatcgatcc accacctgaa actttagtta aagacaaagg
     8461 tatgatttat ggtataggaa aaagagatga aaatatctta actatactca aagtagaagc
     8521 tttgcttaag cgcgaatttt aatgattaaa ctttgtgttt ttgactttga tgctacttta
     8581 atggatggtg aaaccattga tattttagct acagcgcatg gcaagggtaa tcaaacaagc
     8641 gaaattaccc gccatgctat gactggagaa cttgattttt tcgaaagtct tcaaaaacga
     8701 gtaagctttt taaaaggtat gtcttataaa aaagttttag aattaggtag tacacttcca
     8761 ctaatgcatg gagcacatga acttatccaa tatttaaaat ctaaaaatat acaaattgtt
     8821 atttttagcg gtggttttca tgaaggcata gatcccgcta tgcaaaaact tggaattagc
     8881 cttggttttg caaattatct gcatcataaa aatgacattt taacagggct agttggtggg
     8941 gaaatgatgt tttcaaattc aaaaggctta atgctacaac gattaaaaag ctttttaaat
     9001 ttgaaaacag atgaagtgat gtgtgttggc gatggggcaa atgatttggc aatgtttaac
     9061 gaaagtggat taaagattgc attttgtgct aaagaaattt tacgttccaa agctgatatt
     9121 tgcatagata taaaagactt aaaagaaata ataaaggtaa tataatgaaa aatttttctc
     9181 tttggtgtga ttttatagaa aatagttttt tagataatga atttttaaat ttattatcac
     9241 atggaattaa tggtgctact tcaaatcctg ctatttttaa aaatgctatt ttaaattctc
     9301 caatttataa agataaaatt cttaaattaa aaggaaaaaa aacaaaagat atttatgaag
     9361 aattagcaat ttctgatatt caaaaagcag ctgataaatt agctcctctt ttttatcaaa
     9421 aaaacgatgg atttataagt attgaaatag atccaagact tcatgataac acgactctta
     9481 gtttaggcga agctaaaaga ctttatagtg ctattagcaa agaaaatgta atgattaaaa
     9541 ttccagctac aaaagcttct tatgaagtaa tgtatgaact tatgaaaaat ggtattagcg
     9601 tcaatgctac cttaattttt tctcttgaac aaagtcaaaa atgttttgaa gctttaaatg
     9661 caggtttagt cgaatttaga aaaaacaata tagccttaaa agaacaaaat actagaacac
     9721 cacaagctgt tataagtatt tttgtaagtc gttttgatag acttttaaat cctaaagcca
     9781 aagagcaaaa tcgtattgga attttaaatg caaatttagc ttataacaat atctactcaa
     9841 aaaatgaacc taatattcgc gccttgtttg caagcaccgg agttaaagga gatgatctgc
     9901 caaaagacta ttatatcaaa gaacttcttt ttgagaattc tgttaatact gctcctcttg
     9961 atgcaataga ggcatttaaa ggaaaaatgc attttaaaaa acctttaatg aattttgaaa
    10021 tttatacaga acttaatcaa atcatttctc aaagtgaacg agaaaaagct tgcaatgatt
    10081 tattaagtga tggcctagag caattttgta ttgcttttga agatatttta aaagctcttt
    10141 aattaacgta tttttatcat tttattcttt gaaagtttta atatttttga tgggatattt
    10201 tcgaaaaatt tctcatcaag tattatatca gcaacacttc tagcccattc ttcatcaaat
    10261 tcttttccat gcttgtttgc cgaagatgaa taaaaatagc catttttact taaaaaattc
    10321 gcatgtttac actctttcac aatacgaatg gcctgattat tgggataaat aaaagttgtt
    10381 tttttagaac gacgtactaa atttttaaaa gattttggaa ttcttgctaa actttttaac
    10441 tcgcaaaatt tcgcagaagt gattaagcaa ggctgatttt tatctctacc ttttaaagca
    10501 ttaatctctt ctaaattttt acttaaaaat cctaccgtag tatctgtttg agctaaataa
    10561 atcaagattt aagccactct tgtaaactct ttacatctag gcaagattta ctctgtatag
    10621 ctttaatcga ttttgcacct gctaaagctg atcgtaaatt tgtaaaataa ggtattttaa
    10681 aacgaataat attttcacga atttttttcg tatcgccttt aaaactgtga ctatcgcttg
    10741 tattgataac taagtgaatt tccccatttt tcaatttatc ttcaacattg gggcgtcctt
    10801 ctgaaatttt atgtacaagt tcgcactcaa aaccactttc taaaatttcc ttgcaagttc
    10861 cccctgttgc cataagctta aagccaagct ttacatattc tgcagcgatt tttttggtat
    10921 attttttatc cttatctttt aaggagataa ataccacgcc ttgctctgga agatgattaa
    10981 acgatgcaat ttgacttttc gcataagaat ttgcaaaatc cttgcttata cccataactt
    11041 cacccgttga acgcatttca ggacctaatt ctaaatcact tccactaagt tttgcaaatg
    11101 gaaatactgc ttctttcacg ctcatatatt ttggagtttt agggcgtaaa attttagtat
    11161 caaaattaac cactttaaaa gtatcataaa attttaaagc ttcttttaaa tttccttgcc
    11221 acatcacacg cgttgccact tttgctaaag gaatacccgt agctttacta acaaaaggta
    11281 cggtacgact agctctagga tttacctcta tcatataaag ctcattatta tgtaaagcaa
    11341 attgtatatt taaaagtcct acaactccca aatttaaagc aatatctgcg gttttttgtg
    11401 caataaattc ttgcattttt tcatcgatat tgcaaggcgg caaagaacaa gcactgtcac
    11461 ctgaatgaat tcctgcttct tctatgtgct ccataattcc tgcaacataa acatctttac
    11521 catcacaaat cgcatcaaca tcaatttctg tagcattgtc taaaaactga tcgatcaaaa
    11581 cagggctttt atcgcttaca tccacagctt cttgcatata gagtctaagt tcagcctcat
    11641 catttaccac gcgcatcgca cgcccaccta aaacataact tggtcttaca agcacaggat
    11701 accctatatc actagcctta agaaccgctt cttctacgct tgttgcagta gaattttttg
    11761 gctgattgat acctagcttt gtaataaatt cggcaaattt ctttctatct tctgccacat
    11821 caattactct tgcgctagta cctataatct tagctccaaa agcacttaaa cgcttagcaa
    11881 atttcaaagg agtttgtcca ccaaaatgca caatcactcc atcaggtttt tcacgctcaa
    11941 tcaccgctct taaatgttcg aaatcaatag gctcgaaata caaaatatca cttgtatcat
    12001 agtcagtcga aacggtttca ggattacaat tatacataat agttttaata cccatatctt
    12061 taagcgcaaa agaagcatgt acgcaagcat agtcaaattc tataccttgt cctatacggt
    12121 ttggcccccc acctataatc atcacttttt tttctttttt atccttagca tcgtttttac
    12181 tttgagtgag ttcgcttaca ttgatacttg aataaagata aggagttaag gcttcaaatt
    12241 cacccgcaca agtatccact tcactaaatt ctgcgatgat tttttgcttc attcttgcat
    12301 aataaatatc attttggctt aattctaaat tatctttcaa atttacaagc aaggctatca
    12361 ttttatctga aaagcccata gtttttgctt ttctcaaaag agccttattg tttaaaatat
    12421 ccatatcaat ttgttcttca aaatctacaa tttctttaat ctgtgttaaa aaccaaggat
    12481 ctattttaca aagctcataa agttcttcta cgctaaaacc ttccctaaaa gcttgagcaa
    12541 cataaagtaa acgcttttca ttggcattac gaattttaaa aacaagatca tttctatctt
    12601 caaattttac cctatcaaaa ccacttaaag aacgctcaag cgaacaaagt gctttttgta
    12661 tactttcttt aaaagtgcgt cctatagcca ttacctcacc cacacttttc atagctgtac
    12721 ctaaagttgt atttgctcct ggaaattttt caaaggtaaa gcgaggaatt tttgttacaa
    12781 tataatcaat cacaggctcg aaagatgcag gagttcctgt aatatcattt ttaatctcat
    12841 ctaagctaaa acctactgcc aaaagtgtcg caacctttgc tataggataa cccgttgcct
    12901 tagaagctaa agcacttgat cttgaaactc ttggattcat ttctataact atcattcttc
    12961 cattttttga gttgatagca aattgcacat tacttccgcc tgtatctaca ccaatttcac
    13021 gcaaaatagc aaaagaagca ttacgcataa cttgatattc tttatccgtc aaagttaatg
    13081 ctggagctat tgtaatacta tctcctgtat gaactcccat aggatcgata ttttctatgc
    13141 tacaaactat gatacaatta tccgctctat cgcgtataac ttccatttca tattctttcc
    13201 aacctaacaa actttcttca atcaaaattt catggatagg tgataaagct aaagcagtat
    13261 tggcaagttc tttaaattcg tccatattgt aaaccacgcc acttccagca ccccctaaag
    13321 tataagaagc acggatcatc aaaggaaagc cgatttcatc tgcggctttt aaagcttcgt
    13381 cataattata cgcatacatc gattttggca aatccatgcc aatttttttc atacattctt
    13441 taaaaacctg acgatcttcg ccttttttaa tcgcctcagg atttgcgcct aaaaatttca
    13501 catctcctaa aagtccgctt tcataaactt ccatagcaac atttaacgct acttgtccac
    13561 ccatagttgg caaaattgca tcaatttttt cttttttaat aatacttaaa atactttctt
    13621 ttgttatggg ttctatataa gtcgcatctg caaattcggg atctgtcatg atggttgcag
    13681 gatttgagtt gattaatact acacgatatc ctaattcttt taaagtcttt gcggcttgag
    13741 ttccagaata atcaaattca caagcttgtc ctatcacaat aggaccactt cctataagta
    13801 aaatgctttt aatatctgtt cgttttggca taaattttcc taagagcata aatttgggct
    13861 gattataaca aaaattagtt ttataaactt tgaaattatc gatataattt taaaaaataa
    13921 acactctgct tttaatctag gaaataatac ataaagaaat ttaagatttt ttataaaatt
    13981 ctcattcaat tataaacatt tatttgataa tttaataaaa tttttagcat taaacaaagt
    14041 gataataatt agcaaaaata tagaaaattt ttaaaaagtc taatccttga cttataaatt
    14101 atctactaca tataaataag caggaatact aatcttaaca taaggcttta cttctacact
    14161 ttgatacata tcttcatcat taactctatt cacaatacca acaggtatat ctgaaaagaa
    14221 aatattatca agtccacttg ttaaaatttc atctccggta ttaatttttg cccattttgg
    14281 aataaattta accacaatcc tgccatcttc accctggatt aaacctggag ctttggattt
    14341 tcctatataa acagaaaaaa cacactgatc atcaccttgt aagagagcca ttgctctacc
    14401 atttttatta atagctatac ctgcagtata tccttgatat attaaaccac gatttttacc
    14461 aactggaatt ttgctccaat ctaaccataa ttttttataa tcattcaatt gaacgtaaga
    14521 aataactcta gttaaagaaa cttgaggtaa atattttgta gaattttgat cctctaaaat
    14581 acgatttaat tgatttgcaa aactagttac ctttacagca atatcttcta attctttatt
    14641 tctagttttt agttgctgaa tttgatttgc ttgattaaag tgttctgaaa ttttttttcc
    14701 caaataatct ttaatattat aaaaattacc tacaacaaaa tcattaacac ggagaacatt
    14761 ttgcttgata agtcctccat aataaaaaga tataaaaacc aaaaaggcta agacaagaac
    14821 ataaaaaatc ttattcttca ttggttaatt gttgcaataa tgaaatttcc tctaaagctt
    14881 tacccgttcc ttttgctaca gctaaaagcg gttcatctgc gatataaact ggcaaacgta
    14941 caatttcact taagtattta tcaaaaccac gaatcaatgc tccaccacct gttaaaacta
    15001 caccattttc tactatatca cttgctaaat caggcggcat catttcaaga accattttta
    15061 aagcatcagc aatttctttt aaatactcac gcattgcttc tcttacatct tcacttgtaa
    15121 gttcaatacg acttaaaagt ccacttactt gatcgcgtcc ttttaccacc atagaaagtt
    15181 cttttggaag ttgtattgct gaacctatgg tgattttgat ctcttcgcct gttctttcac
    15241 ctatgataag attgtatttt tcttttacat aattaactat actcatatca agcttatctc
    15301 cagccgtacg aatagacttt gaaatcacaa gtccacccaa agaaatcact ccgatctcag
    15361 tagttccacc ccctatatct actaccaaat ttcctttagg ttcttgtata ggtaaacttg
    15421 caccaatagc tgctgccata ggctcttcga tcaaaaatac ctctcttgca cctgcactta
    15481 aagcactttc tcttaccgct tttctttcta cttgagttaa accataagga acagaaataa
    15541 taattctagg gcgtaaaaaa ctttttctac gatgtgtttt ttctataaaa tagcggatca
    15601 ttttttcagt catatcaaaa tctgcaatca cgccatcttt cataggacga atagcttcga
    15661 tgttacctgg ggtttttccc accatatctt tagcttcttt acctacggct aaaatttttg
    15721 ctttggaacc atacctttct ctttcaactg ccacaacaga aggctcgttt atcactatac
    15781 ccttatcttt taccaaaact agcgtattag ctgttcctaa atcaatcccc atatcactag
    15841 aaaaaaatcc tataagttga tctaatatca tttctatcct ttttaactta tttttctttt
    15901 tattaataat gcctttgcat tgtctttaac aacttctttg gttattacaa tatcatagtt
    15961 tttatactct ggtaattcaa acattaaatc taccatcatt tcttctataa tacttctaag
    16021 ccccctagcc cctgtttttc tctccaatgc aagttgtgcg atagctctta gggcatcttc
    16081 ttcaaatttt aaattcactc catcaatagc aaaaagcttt tgatattgct taataatggc
    16141 atttttaggc tcagttaaaa ttcttaccat atcttcttca ttaagctcat ttaaagatgc
    16201 aatcacatgc aaacgaccta taagctcagg aatcaaacca aaatgcacca aatcatcagg
    16261 ttcaattttc tcaagtaaag ctttattttc ttcttttgca tcatcaaaaa agcccacaac
    16321 tttatcgcca agttttcttt ttaagatagt ttccaaacca tcaaaagctc caccacaaac
    16381 aaataaaata tttgaagtgt caatttgtat aaactcttga tttggatgtt ttcttccccc
    16441 ttttggtgga atatttacca aacttccttc gataatctta agtaaagctt gttgcacgcc
    16501 ctctccactt acatcacgag taatagaacg attttcactc attctagcaa ttttatcaat
    16561 ctcatcaata aaaactatac ctttttgagc tctttgcaca tctccatctg cagcttgtaa
    16621 aagacgtgtt aaaatatttt ccacatcctc acctacatat cctgcttcag ttaaagaagt
    16681 tgcatcacaa attgctatag gtacatctaa aaatttagct aaagtttgtg ccaataaagt
    16741 ttttccactt cctgttggcc caacaagtaa aatatttgac ttaaaaagct ctgtatcatc
    16801 atcttgaagt tcggctttaa aaagtctttt ataatgattg tatactccaa cactaaaaac
    16861 ttttttagct ctatcttgtc ctataacata acgatctaga taagctttta attcttttgg
    16921 agtgatatct ttaaattctg tattatggct ttgtttaggt tctttaaatt ctttttcttc
    16981 tccataaata atactataag caccttcaac gcaatattca caaataaaag catcatcatt
    17041 ttcatttgct aaaattcttc tttgtggatt ctccacttca ttgcaaaaac tacattttct
    17101 aggcattatt tttaccccta tagacaggaa ttccgcgctt tgtttctaat ataaaatggc
    17161 acattttttt aacattttca ctttcttgat tttcaagcaa atttttagca ttttctttta
    17221 aatctccttg tctaaataaa gttttaaaag ctctactaag tctatctact tcatctttat
    17281 caaaacgacg acgaatacct actaaattta aacttctaat acttgcacga tttccttctg
    17341 ctaaacaaaa cggtactata tcctgagaaa gtgcacttgc tcctgctatc atacaaccct
    17401 cacctacttt gacaaattga tgaataggtg taagcccgcc tacaaccgta aaatctccaa
    17461 gctctacatg tcctgctaaa gttgcattat tagctaaaat aatattatta cctaaaagac
    17521 aatcatgagc aatatgacaa taagccataa taaaagcatt atcgcctata cgagtaaaac
    17581 catctccttt agctgtacct gaatttatcg ttgcaaattc tctaatagtt gcattttttc
    17641 ctataacaac accgcttttt tgctcttctt tataagatat gtcctgagga atatcgccta
    17701 ctatagcata agaaaataca cgagaatgat cacctatagt tgtatctgaa agaattcgag
    17761 caccttgttt gatgacaaca tcattaccta ttttagtatc tttacctaca taagcataag
    17821 cttctattac aacatcgtca ccaagttgtg caccctcttc aatcaccgca cttggatgaa
    17881 tttttttcat tatttatcca ctatcatagc tttaagctcg gcctctgcaa ctaaatttcc
    17941 atctacaaaa gcttgccctt taaaaatcca catattacca cgatttttaa ccacgctcat
    18001 ttcataatca agcctatctc caggacgcac aggatttcta aattttgctc catctatgcc
    18061 tgtgaaataa actactttac tttttggatc cactttatct tccatacttt caaaagctaa
    18121 aactccacct gtttgagcca taccttctaa aatcaaaact ccaggataaa taggatgccc
    18181 tggaaaatgt cccataaaaa catggtcact tatactgatg tttttatatc ctcgaaccac
    18241 ttctttaact tttaattctg taattttatc tactagtaaa aaaggataac ggtgtggtaa
    18301 gatttcttga atttgcatta catctatcat tattaaatta accttgaaaa caattaaaaa
    18361 ttttattat
//
LOCUS       DAPIWB010000036        17754 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.037, whole genome shotgun sequence.
ACCESSION   DAPIWB010000036 DAPIWB010000000
VERSION     DAPIWB010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17754)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17754)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17754
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.037"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(8..418)
                     /locus_tag="RJ266_000998"
     CDS             complement(8..418)
                     /locus_tag="RJ266_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HDV7354756.1"
                     /translation="MMDLKEIVQFLDDNAPAFLATLGTCGNPRVRPIQSPLLVGDKIY
                     FCTANTKGLFKHIKNYNGIEFCSCAKDGTFLRLRANAVFEPNLEVKKMMFKKYPYLVN
                     LYETPQNPKFEVFYLDHLSARMQFVNGEFKFFKA"
     gene            complement(425..1168)
                     /gene="fabG"
                     /locus_tag="RJ266_000999"
     CDS             complement(425..1168)
                     /gene="fabG"
                     /locus_tag="RJ266_000999"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HDV7354757.1"
                     /translation="MKFSGKNVLITGASKGIGASIAKTLAGFGLKVWINYRSKPELAD
                     ALKDEIIASGGVAAVIKFDASKEDEFENGVKTIVESDGELSYLVNNAGVTNDKLALRM
                     KLEDFSSVVDTNLSSAFLGCREALKTMSKKRFGAVVNIASIVGEMGNAGQVNYSASKG
                     GMIAMTKSFAKEGASRNLRFNCVTPGFIKSDMTEVLSDEIKQTYQDNIPLKRFAEPEE
                     VANCVAFLLSDYASYVTGDVLKINGGLYM"
     gene            complement(1240..2718)
                     /locus_tag="RJ266_001000"
     CDS             complement(1240..2718)
                     /locus_tag="RJ266_001000"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HDV7354758.1"
                     /translation="MKQKCVLIITDGIGYNKNSKFNAFEAAKKPSYEKLFKEVPNSLL
                     KTSGLAVGLPEGQMGNSEVGHMCIGSGRIIYQNLVCINKAIENKELEKNENLQKLLAK
                     CKRVHIIGLYSDGGVHSMDTHFKAMLEICAKNGNEVFAHAITDGRDVSPKSGLNFIKD
                     LKEFCENLGVHFATLCGRFYAMDRDKRWDRVKEYYECLLGKAYKVPNLLEYLQKSYDE
                     NVTDEFIKAAQNENYKGMREEDGIIFINFRNDRMKQLVEVLNSKDFKEFEREKIFENL
                     LTMSVYDDKFKLPVLFEKEKIENTLAQVISKAGLSQLHTAETEKYAHVTFFFNGGKEE
                     LLENETRVLIPSPKVKTYDEKPQMSAFEVCDAVKKGIEKGEDFIVVNFANGDMVGHTG
                     DFNAAIKAVEAVDTCLGEIIECAKKHDYAFIITSDHGNCEAMQDEKGNLLTNHTTFDV
                     FVFVQAKGVSKIKDNMGLSNIAASVLKILDLEIPKEMNEALF"
     gene            2798..3859
                     /locus_tag="RJ266_001001"
     CDS             2798..3859
                     /locus_tag="RJ266_001001"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HDV7354759.1"
                     /translation="MYYLSDLSHYAFFTYISVRAGFAFFIALCLSLFLMPKFITWAKA
                     KNASQPIYEYAPETHKTKCHTPTMGGLIFISSAVIASLFCIKFDNIFAISALLCLILF
                     CLIGLIDDLGKVLKKDNHSGLSPRMKLLAQIIAGLICILPLYFSSELSTELFIPFYKH
                     PLFDMEIFAIAFWILVLISSSNAVNLTDGLDGLATVPSIFSLSTLGIFLYLSGNLNYS
                     EYLLLPKIQGLGEVVIICAALIGALMGFLWYNCYPAQVFMGDSGSLALGGFIGFLAVI
                     SKNEILLLLIGFVFVLETVSVILQVGSFKIFNKRVFKMAPIHHHFEKVGWVENKIIVR
                     FWMIALLSNLLALASIKLR"
     gene            3859..5067
                     /locus_tag="RJ266_001002"
     CDS             3859..5067
                     /locus_tag="RJ266_001002"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HDV7354760.1"
                     /translation="MKISLFGYGKTTRAIAENLVDKFGPFDIYDDHFTETKKDTLGNL
                     LLNPNDFDDNLSDIEIPSPGFPPKHKLIQEAKNLQSEYDFFYDVMPKSVWISGTNGKT
                     TTTQMATHLLSHIGAVMGGNVGTPLAELNPYAKLWILETSSFTLHYTHKAKPEIYALL
                     PISPDHLSWHGSFDNYVQDKLSVLKKMNECDVTILPKIYANTPTKAHIISYKDEKDLA
                     AKFSIDMEKISFKSPFLLDAIMALAIEKILLDTLSYELLNSFVMEKNKLEEIKDSQNR
                     LWVNDTKATNESAVMAALNRYKDKKIHLIIGGDDKGVDLSNLFDFMKGFDIELYAIGI
                     STEKMLDYAKKANLKAYKCEVLSKAVNEISNHLRVNEVALLSPACASLDQFNSYAERG
                     KVFKECVNKI"
     gene            complement(5229..5345)
                     /gene="rrf"
                     /locus_tag="RJ266_001003"
     rRNA            complement(5229..5345)
                     /gene="rrf"
                     /locus_tag="RJ266_001003"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(5601..8507)
                     /locus_tag="RJ266_001004"
     rRNA            complement(5601..8507)
                     /locus_tag="RJ266_001004"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(9043..9119)
                     /locus_tag="RJ266_001005"
     tRNA            complement(9043..9119)
                     /locus_tag="RJ266_001005"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9083..9085),aa:Ile,seq:gat)
     gene            complement(9128..9203)
                     /locus_tag="RJ266_001006"
     tRNA            complement(9128..9203)
                     /locus_tag="RJ266_001006"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9168..9170),aa:Ala,seq:tgc)
     gene            complement(9306..10818)
                     /locus_tag="RJ266_001007"
     rRNA            complement(9306..10818)
                     /locus_tag="RJ266_001007"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            complement(11299..12036)
                     /locus_tag="RJ266_001008"
     CDS             complement(11299..12036)
                     /locus_tag="RJ266_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7354761.1"
                     /translation="MIKAFSLLEFVFIILILGIVFNLGSLYLKKDNLLEGAIQILNDI
                     QYTQSLAMMQEGIRVDELTIAKREWFKSKWQIYFIKSAATGYDQTYTIFLDKNGDGNA
                     NLGKTEINIDREIAVDVINHNKLMNSGQSGVISKDDEKTTQRFNITKRFGIEKVEFKG
                     SCSRFTRLVFDEMGRVYSPLKNANYAYEKTLAKNNSDCIIRLLSKKHALCIVIDTLSG
                     YAYIPDFKTLKGQFVNIKNKNYECSKI"
     gene            complement(12029..13255)
                     /locus_tag="RJ266_001009"
     CDS             complement(12029..13255)
                     /locus_tag="RJ266_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354762.1"
                     /translation="MEKIKNYKLIIILLSLDLLALLYGISTLSISADEADIYFGEQGK
                     SLIFSHSLLYYISHFGTFIFGQNDFGLRLPFLFFHFLSCLLLYLLALKYTKTKIDAFF
                     SLLLFVLLPGTVASALLVNAASLVIFLTLAILCAYEYEKKWLFYILLIIVLFVDKSFN
                     ILFLTFFFFGIYKRNAILFTLSLVLFGASISFYGFDTGGRPRGYFLDTLGIFAACFSP
                     LVFVYFFYTIYRLTFQKYKNLLWFLMSVTFVFCLLLSLRQKLFLDDFLPFCVICTPLL
                     IKTLMQSYRVRLPVFRLRYKIFIECSIIFLIFCYFLIVSNQLLYYFINNPNRHFANNY
                     HFAKELALELKKQDVLELATAPSLQKRLRFYGIKNSNKFYLKALKQADKHDMDKKIVK
                     VKLGKYEKVYQILNYD"
     gene            13382..13966
                     /locus_tag="RJ266_001010"
     CDS             13382..13966
                     /locus_tag="RJ266_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HDV7354763.1"
                     /translation="MQTIDQIFQTQIDIKKSIFLSFLCPFKDFKFLIETLKKEHPKAV
                     HFVYAYRVLNDFNQIVEDKSDDGEPKGTSGMPTLNVLRGYDLINAALITVRYFGGIKL
                     GTGGLVRAYSDAANAVINNSSLLSFELKKNITIAIDLKNLNRFEHFLKTYSFNFTKDF
                     KDCKAILHIKLNEKEEQEFEIFCKNFAPFEIEKL"
     gene            complement(14010..14393)
                     /locus_tag="RJ266_001011"
     CDS             complement(14010..14393)
                     /locus_tag="RJ266_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354764.1"
                     /translation="MQVNYRTISSYEYDAISGQYKQVDKQVEDYSSSGDSDFMDMLNK
                     ADEKSSGDALNSSSSFQSNAQNSNSNLSNYAQMSNVYAYRFRQNEGELSMRAQSASVH
                     NDLAQQGANEQSKNNTLLNDLLNAI"
     gene            complement(14468..14803)
                     /locus_tag="RJ266_001012"
     CDS             complement(14468..14803)
                     /locus_tag="RJ266_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354765.1"
                     /translation="MMAKFRIQYSAGFGHYTQNHKGFGPTIYIEEVVEFDNGKDYFDY
                     IDFYKTYSKSDDTYFHISFLEDRPLSDKEITIRNEYRKMRDENCKKAKEEFIANNELD
                     VEHLPTHHD"
     gene            complement(14793..16370)
                     /locus_tag="RJ266_001013"
     CDS             complement(14793..16370)
                     /locus_tag="RJ266_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDV7354766.1"
                     /translation="MVEVKNLTMRFANQLLFENVNLKLVRGQRYGLIGANGAGKSTFL
                     KILSGEIESSSGEIVFDEGLKIAVLGQDQFAFENYTIKDAVMCANKRLYEALKEKEKL
                     YMSEEFTDEINERLGELEIITAEEDPNYDCETRCEKILSSLKIKDFDALMSTLQSADK
                     FKVLLAQVLFLGADVLFLDEPTNNLDLEVISWLENELLRHEGTLVVISHDRHFLNKIC
                     TRILDVDFKQIRDFAGNYDDWYMASTLLAKQAELKRDKTLKEREELENFIRRFSANAS
                     KAKQATSRAKALEKLELEEIKISSRRDPSIVFRTNREIGNEVLEIKGIGKAYDKQLFS
                     NLELKIEKNDKIALIGANGVGKSTLAKIIAHAISPDSGSIHLGATIELGYFPQDTSNL
                     ICENLKLYEWLMSEKFKDLDEIRKCLGRMLFSGSDQEKMAASLSGGEKHRLMLSRLML
                     ERPNFLLLDEPDNHLDLESIIALGEALYNFKGVVLCISHDRELVSAFANRIWHLENGK
                     LTDFRGTYQEFLGENDG"
     gene            complement(16500..16916)
                     /locus_tag="RJ266_001014"
     CDS             complement(16500..16916)
                     /locus_tag="RJ266_001014"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354767.1"
                     /translation="MFKKVILFFLMGFALLQANSLDKCDNTAVVSNLKEKIPSEIFKN
                     LYELSGLKAQGIDYEDYAKGLKEIAKHDGMVNYTDMIEINSISNFDLNFDSCMATINA
                     ALKGEQRKGLWSVVYKVSNINQVKITDITYINGDFQ"
     gene            complement(16929..17561)
                     /locus_tag="RJ266_001015"
     CDS             complement(16929..17561)
                     /locus_tag="RJ266_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HDV7354768.1"
                     /translation="MTKFLSICSLIAMLLSGCGSDFPGQPSDVARVQQNKYPNGNLKE
                     EIPYNKDSRIHGLKRAFYDNGQLRAEENYKNGKKDGISREYSRNGQLLEEVHFKDNRG
                     YGDFASYYENGNMRAKGKLLGYNEDGMPEFEGNYKEYYENGTLMCDYNFDNKGKFDGV
                     QKRYDENGALEDEENYKNGLKNGVFREYKKGEIVREEEYKDGILVAKPKN"
     gene            complement(17570..17740)
                     /locus_tag="RJ266_001016"
     CDS             complement(17570..17740)
                     /locus_tag="RJ266_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002899643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superinfection immunity protein"
                     /protein_id="HDV7354769.1"
                     /translation="MLPAIIGLSRKHSNWLIISLLNLFFGWTIIVWLVCLIWSFTGSF
                     KQTIIIKEKNEK"
BASE COUNT         5645 a         3561 c         2562 g         5986 t
ORIGIN      
        1 caaatcatta agccttaaaa aacttaaatt ctccattcac aaattgcatt ctagcgctta
       61 aatgatcaag ataaaaaact tcaaattttg gattttgcgg agtttcataa agatttacaa
      121 gataaggata ttttttaaac atcatttttt taacttctaa atttggttca aaaaccgcat
      181 tagctctaag tcttaaaaaa gtcccatctt ttgcacaaga acaaaattca ataccattat
      241 aattttttat atgcttaaaa agtccttttg tatttgctgt gcaaaaataa attttatctc
      301 ccacaagcaa tggactttgt ataggacgca ctctaggatt tccacaagtt cctaaagtgg
      361 ctaaaaatgc tggtgcatta tcatctaaaa attgtactat ttcttttaaa tccatcattt
      421 ttccttacat atataaacca ccattgatct taagcacatc gcctgtcaca taagaggcat
      481 aatcactaag taaaaacgct acacaattag ccacttcttc aggttctgca aagcgtttta
      541 aagggatatt atcttgatag gtttgtttga tttcatcact taaaacttca gtcatatcgc
      601 tttttatgaa acctggagtc acacagttaa agcgtaaatt tctacttgct ccttctttag
      661 caaaagattt agtcatagct atcattccac ctttactagc agaataattt acttgtccag
      721 cattgcccat ttctccgaca atagaagcga tatttacaac agcaccaaaa cgttttttac
      781 tcatggtttt taaagcttct ctacaaccta aaaaagctga gcttaaattt gtatctacaa
      841 cgctactaaa gtcctctaat ttcattctta aagcaagttt atcatttgta acgcctgcat
      901 tatttacaag ataacttaat tctccatcac tctcaactat agtttttaca ccgttttcaa
      961 actcatcttc tttgcttgca tcaaatttaa tcacagcagc aacgccacca cttgcaataa
     1021 tttcatcttt taaagcatct gcaagttcag gttttgaacg ataattgatc caaactttaa
     1081 gtccaaaacc cgccaaagtt tttgcgatag aagcacctat tcccttactt gctccagtaa
     1141 ttaaaacatt ttttccacta aatttcatta tctatcctta ataagtttaa ttttaaaaat
     1201 tgcaatctta acaaatttct tataaaaaag gcaaacaaac taaaataaag cctcattcat
     1261 ttcttttgga atttctaagt ctaaaatttt aagcacgctt gcagcgatat tgctaagccc
     1321 catattatct ttaatctttg aaactccctt tgcttgcaca aaaacaaaaa catcaaaagt
     1381 ggtgtgattg gtaagcaaat ttcctttttc atcttgcata gcctcgcaat ttccatgatc
     1441 acttgtaatg ataaaagcat aatcatgctt ttttgcacat tctataatct cgcccaaaca
     1501 agtatccacc gcttcgacag cctttatagc agcattaaaa tcacctgtat gtccaaccat
     1561 atctccattt gcaaaattta ccactataaa atcctcaccc ttttctatgc cttttttcac
     1621 tgcatcacac acttcaaaag cactcatttg gggtttttca tcataagttt ttaccttggg
     1681 gcttgggatt aaaacccttg tttcattttc taaaagctct tcttttccgc cattaaaaaa
     1741 gaaagttaca tgggcgtatt tttcggtttc tgcggtatga agctgactaa gccctgcttt
     1801 agaaatcact tgcgctaaag tattttcaat tttttctttt tcaaaaagca cagggagttt
     1861 aaatttatca tcataaacac tcatagtaag taaattttca aagatttttt cgcgttcaaa
     1921 ctctttaaaa tccttagaat ttaacacttc aacaagttgt ttcattctat catttctaaa
     1981 gttgataaag ataatgccat cttcttctct catgcccttg taattctcat tttgagctgc
     2041 tttgataaac tcatcagtaa cattttcatc gtaagatttt tgtaggtatt ctaataaatt
     2101 tggcacttta taagccttac ctaacaagca ctcataatac tcttttaccc tatcccaacg
     2161 cttatctcta tccatagcat aaaaacgccc acaaagcgta gcaaaatgca cgcctaagtt
     2221 ttcacaaaat tcttttaaat cttttatgaa atttaagcca ctttttggac ttacatcacg
     2281 cccatcagtg attgcgtgag caaaaacttc attgccattt ttcgcacaaa tttcaagcat
     2341 ggctttaaaa tgcgtatcca tagaatgcac cccgccatca ctataaagcc ctataatatg
     2401 cactctttta cattttgcta aaagtttttg taaattctca tttttttcaa gttctttgtt
     2461 ttcaatggct ttattaatac acactaaatt ttgataaata atacgcccac ttcctataca
     2521 catatgccct acttcactat ttcccatctg cccttctggc aaacctacag ctaaaccact
     2581 cgtttttagt aaagaatttg ggacttcctt aaaaagcttt tcataacttg gttttttagc
     2641 tgcttcaaaa gcattaaact tactattctt attataccct attccatctg taataattaa
     2701 aacgcatttt tgcttcattt ttctctcttt tataagaatt tttttggtta gattttacta
     2761 aaattaaact tttaaaaacc aaaaagaagg ctaggttttg tattatcttt cagatttaag
     2821 tcattatgct ttttttactt atattagtgt gcgtgcagga tttgcatttt ttatcgcttt
     2881 atgtttgtct ttatttttaa tgcctaaatt tattacttgg gcaaaagcta aaaatgctag
     2941 tcaacctatt tacgaatacg ccccagaaac tcataaaacc aaatgccata ctccaaccat
     3001 gggtgggctt attttcatca gttctgcagt aatcgcaagt ttattttgta tcaaatttga
     3061 taatattttt gctataagtg ctttactttg tttgatactt ttttgtttga taggactcat
     3121 agatgattta ggcaaagttc taaaaaaaga taatcattca ggacttagtc caagaatgaa
     3181 gcttttagca caaatcatcg ctggacttat ctgcatctta cctttatatt ttagttcaga
     3241 gcttagcacg gaacttttta taccttttta taaacaccct ctttttgata tggaaatttt
     3301 tgccattgct ttttggattt tggttttaat ttctagctct aatgctgtaa atttaaccga
     3361 tggacttgat ggcttagcta cagttccaag cattttttct ttatctactt tagggatatt
     3421 cttatatttg agtggaaatt taaattatag tgaatatcta cttttgccaa aaattcaagg
     3481 acttggtgaa gtagtgatta tttgtgctgc attaatcggt gctttaatgg gatttttatg
     3541 gtataactgt tatcctgcac aagtttttat gggagatagt ggaagtttag ctttaggtgg
     3601 ctttatagga tttttagccg ttattagcaa aaatgaaatt ttacttttac tcataggttt
     3661 tgtttttgtt cttgaaactg tttctgtaat tttacaagtt ggaagtttta aaatttttaa
     3721 taaaagagta tttaaaatgg cgcctattca tcatcatttt gaaaaagttg gctgggtgga
     3781 aaataaaatt atagtgcgtt tttggatgat agccttactt tcaaatttgc ttgcacttgc
     3841 atcaataaag ctaagataat gaaaatttca ctttttggat acggaaaaac cacacgtgct
     3901 attgctgaaa atttagtaga taaatttggg ccttttgata tctatgatga tcattttaca
     3961 gaaacaaaaa aagatacact aggaaattta cttttaaatc ctaatgattt tgatgataat
     4021 ttaagcgaca ttgaaattcc tagtccaggt tttccaccaa agcacaaact cattcaagaa
     4081 gcaaaaaatt tacaaagtga atatgacttt ttttacgatg tcatgccaaa atccgtttgg
     4141 ataagcggaa ccaatggcaa aaccaccacc acacaaatgg ctacacattt attatcacac
     4201 attggtgctg ttatgggtgg aaatgttgga actcctttag cagagcttaa tccttatgca
     4261 aaactttgga tacttgaaac ttcatctttt accctacact acactcataa agctaaacct
     4321 gaaatttatg cacttttacc tataagtcct gatcatcttt cttggcatgg aagttttgat
     4381 aattatgttc aagataagct aagcgtttta aaaaaaatga atgaatgtga tgtaacaata
     4441 ctgcctaaaa tttatgcaaa tactccaaca aaagctcata taataagcta taaagatgaa
     4501 aaagatctgg ctgctaaatt tagcattgat atggaaaaaa tttcctttaa aagtcctttt
     4561 ttactcgatg ctatcatggc tttagccata gaaaaaattc tacttgatac tttaagctat
     4621 gagcttttaa atagctttgt aatggaaaaa aataaacttg aagagattaa agacagtcaa
     4681 aatagacttt gggtaaatga cactaaagcc acaaatgaaa gcgcggtaat ggctgcactt
     4741 aatcgctata aagataaaaa aatccatctt atcatagggg gagatgataa gggtgtagat
     4801 cttagcaatt tatttgattt tatgaaagga tttgatatag aactctatgc tataggtatt
     4861 agtactgaaa aaatgcttga ttatgcaaaa aaagcgaatt tgaaagccta taaatgtgaa
     4921 gttttatcta aggctgtaaa tgaaatttca aatcacttaa gagtcaatga agtggctctt
     4981 ttaagtcctg cttgtgcaag tttagatcag ttcaactctt acgcagagcg tggaaaagtc
     5041 tttaaagaat gtgtgaataa aatttaattt attatacaat ccatacaaat atattaaact
     5101 ttccaaaccc ctaaaaaccc taaccagcag caaactcttt tttaaacacg attctaagta
     5161 tcatctaaaa caacaataaa aataaacata ggatttatat ataaagtaag taatgaagac
     5221 atttaacaag tccgcaatga gctactttcc ccctgccagt aaggcgtagt atcatcaccc
     5281 acgatgtgct tagcttcttg gttcgggatg gagcaaggcg tttccacatc tgtataatca
     5341 cggacattgt tatttaaata ttctttgaaa aattgaattt aagaataaaa cttaatcttt
     5401 tattccttta cttttttctt tattctcttt cttcttttct tatcttttat ctttgataag
     5461 tttttatata gaatacttaa aaaacaatgt taagagcaag ttctaataca aactctactt
     5521 gaaagatttc tattaaactc taaatattat ctatattcaa agtcttctta aaaaccttaa
     5581 caaggaagcg atgctttatt aaagataagc caaacgctct attagtactg gtcagctaaa
     5641 ggactttcat ccattacaca cccagcctat caaactagta gtcttctaga gagcttagag
     5701 aagattcatc ttagagttgg cttcacgctt agatgctttc agcgtttatc ctttccaaac
     5761 ttagctacgc tgcgatgctc ttggcagaac aacagctaca ccagtggttt gttcaacccg
     5821 gtcctctcgt actagggtca aatctcttca atcttcttac gcccacggca gatagggacc
     5881 gaactgtctc acgacgttct gaacccagct cgcgtaccgc tttaaatggc gaacagccat
     5941 acccttggga cctgctccag ccccaggatg cgatgagccg acatcgaggt gccaaacctc
     6001 cccgtcgatg tgagctcttg ggggagatca gcctgttatc cccggggtac cttttatcct
     6061 ttgagcgatg gcccttccac acagaaccac cggatcacta agaccgactt tcgtctctgc
     6121 ttgacttgta tgtcttgcag ttaagctggc ttataccttt atactctacg aacgatttcc
     6181 aaccgttctg agccaacctt tgtaagcctc cgttattatt tgggaggcga ccgccccagt
     6241 caaactaccc accagacatt gtcccacttg aggataactc aagctggtta gctacccaaa
     6301 taagaaagag tggtatctca acaatggctc atatacaact ggcgtcatat actcaaagcc
     6361 tcccacctat cctgcacatt cttatccaag tagcagtgtc aagctgtagt aaaggtccac
     6421 ggggtctttc cgtcttgccg cgggtaggag gaattttcac ctccactaca atttcactgg
     6481 atccctcttt gagacagctc ccatctcgtt acgccattca tgcaggtcgg tatttaaccg
     6541 acaaggaatt tcgctacctt aggaccgtta tagttacggc cgccgtttac tcgggcttcg
     6601 atcaagagct tcgctaatgc taaccccatc aattaacctt cgagcaccgg gcaggcgtca
     6661 caccctatac atcctcttac gagttagcag agtgctgtgt ttttggtaaa cagtcgggag
     6721 ggactctttg ttgtaagttt ccttgctttc ggagtaaatc ctaatacaaa gctaaccaca
     6781 ccttataccg aagatacggt gctattttgc agagttcctt aaagagagtt cttccacgcg
     6841 ccttagaata ctcatcccac ccacctgtgt cggtttacgg tacgggcaac attagctaaa
     6901 cttagaaact tttcttggct cgacggcatc aggggttctt ctatccatcc gaagacttca
     6961 aaaagccttt cagttctcgg agtattgtta tacggatttg cctgtataac ctcctacgac
     7021 cttagactag cacttccatc cgctagcccc cttagcccta agcgtccttc catcgcacac
     7081 taatgttggt attggaatat taaccaattt gccatcgtct acccctttcg gactcgactt
     7141 aggacccgac taaccctacg atgacgagca tcgcgtagga aaccttgggt ttacggcgtt
     7201 aatgattctc acattaatta tcgctactca tgcctgcatg ctcacttcta ttcgctccag
     7261 cactccttac cggtatacct tcgacgcaaa tagaacgctc tcctaccact tagtaaacta
     7321 agtctacagc ttcggtactt actttagccc cgttatattt tccgcgcaaa atcactagac
     7381 cagtgagcta ttacgctttc tttaaaggat ggctgcttct aagccaacct cctggttgtt
     7441 taagtaactt cacatcgttt tccacttaag taagatttag ggaccttagc tggtagtctg
     7501 ggttgtttcc ctcttgacga cggattttat cactcgccgc ctgactgctg tgattacata
     7561 taaggtattc ggagtttgat agggtttggt acattggtgt atgccctagc ccattcagtg
     7621 ctctaccccc ttatattacg acacaacgct atacctaaat atatttcgga gagaaccagc
     7681 tatcacgaag tttgattggc ctttcacccc tatccacaag tcatcccggg gcttttcaac
     7741 gcctatgggt tcagtcctcc actagttctt acactagctt caacttgctc atggatagat
     7801 cacttcgttt cgggtctgca gcatctgact aagcgcccta ttcagactcg ctttcgctac
     7861 ggcttcgcgt ttgcttaacc ttgccagaca ccacaactcg caggctcatt atgcaaaagg
     7921 cagtccatca ccctgtattg ctacataggg ctctgaatga ttgtaagcaa atggtttcag
     7981 gttctatttc actctgatca cctcagttct tttcaccttt ccctcacggt acttgtgcac
     8041 tatcgatctg gtattagtat ttagggttgg atcgtggtcg acccagattc agacaggatt
     8101 cctcgtgtcc cgccctactc aggatactgc tagctaaggt ttgtttttcg catacgggac
     8161 tatcaccctc tatggttata ctttccagaa tgttctgcta aacttacctc ttgcacattg
     8221 cagtcctaca acccccagtg caagcactgg gtttgccctc ttgcgctttc gctcgccgct
     8281 actgacgcaa tctctattga tttcttttcc tgagggtact aagatgtttc aattcccctc
     8341 gttcgctcct atataggtaa tgtatatctc tatacattgg gttgccccat tcggaaatct
     8401 acggatcaaa gcttcttgac agctccccgt agcttatcgc agtctagtac gtccttcatc
     8461 gcctttacca gtcaaggcat ccaccattcg ctcttagtag cttacctttt ttacctttta
     8521 ttattgattc taaaacgcat cacttccttg ttaaagtttt tatgataaga cttctttatc
     8581 ttaagacgga aagcattcaa acacttaata taaaactaaa tgatttagtc tcaactaagc
     8641 tgtgagtttg aaacttgtct ttaatttata atccttaaat ccaatattct ctttattcat
     8701 agaaataaag acagctaaaa gttaagttaa actaaagaaa agataaatag gttttatcct
     8761 ttaacaagtc ctgtaaaatt gtttttatta aaacttgctt gtgactctta acaatgataa
     8821 ttaaaaagaa catttaggtt taaaacctaa aggaagtata tatattaaca taatcattat
     8881 aaatataaat gcataatgta tatgctactt atatctatta aagtatattc ttttatagtt
     8941 aaagataaaa aataaatcta agtatagagt ttatatttta tatttaatct attttatata
     9001 cttgctttag attttaaagc ttctttattc aaatcttttt tatggtgggc ctaacaagac
     9061 ttgaacttgt gacctcaccc ttatcagggg tgcactctaa ccagctgagc tataggccct
     9121 taataaatgg tggagaatag cgggatcgaa ccgctgacct cctgcgtgca aagcaggcgc
     9181 tctcccagct gagctaattc cccataaaca attagcttta tcatcaatct ttgaaatcta
     9241 aacaagaatc aattgagttt atatattgaa gtaatagttg tgagacttat tactttgtac
     9301 tctagaaagg aggtgatcca accgcaggtt ctcctacggt taccttgtta cgacttcacc
     9361 ccagtcgctg attccactgt ggacggtaac tagtttagta ttccggcttc gagtgaaatc
     9421 aactcccatg gtgtgacggg cggtgagtac aagacccggg aacgtattca ccgtagcatg
     9481 gctgatctac gattactagc gattccggct tcatgctctc gagttgcaga gaacaatccg
     9541 aactgggaca tattttatag atttgctcca cctcgcggta ttgcgtctca ttgtatatgc
     9601 cattgtagca cgtgtgtcgc cctgggcata agggccatga tgacttgacg tcgtccacac
     9661 cttcctcctc cttacgaagg cagtctattt agagtgctcg gccgaaccgt tagcaactaa
     9721 atacgtgggt tgcgctcgtt gcgggactta acccaacatc tcacgacacg agctgacgac
     9781 agccgtgcag cacctgtctc taagttctag caagctagca ccctcatatc tctataaggt
     9841 tcttaggata tcaagcccag gtaaggttct tcgcgtatct tcgaattaaa ccacatgctc
     9901 caccgcttgt gcgggtcccc gtctattcct ttgagtttta atcttgcgac cgtactcccc
     9961 aggcggtaca cttaatgcgt tagctgcatt actgagatga ctagcacccc aacaactagt
    10021 gtacatcgtt tagggcgtgg actaccaggg tatctaatcc tgtttgctcc ccacgctttc
    10081 gcgccttagc gtcagttgag ttccagcaga tcgccttcgc aatgggtatt cttggtgata
    10141 tctacggatt ttacccctac accaccaatt ccatctgcct ctccctcact ctagactatc
    10201 agtttcccaa gcagtttaat ggttaagcca ttagatttca caagagactt gataatccgc
    10261 ctacgcgccc tttacgccca gtgattccga gtaacgcttg caccctccgt attaccgcgg
    10321 ctgctggcac ggagttagcc ggtgcttatt ccttaggtac cgtcagaatt cttccctaag
    10381 aaaaggagtt tacgctccga aaagtgtcat cctccacgcg gcgttgctgc gtcagggttt
    10441 cccccattgc gcaatattcc ctactgctgc ctcccgtagg agtctggacc gtgtctcagt
    10501 tccagtgtga ctgatcatcc tctcagacca gttaagcgtc atagccttgg taagccatta
    10561 ccttaccaac tagctgatac tatatagtct catcctacac cgaaaaactt tccctactca
    10621 acttgtgtta agcaggagta tagagtatta gcagtcgttt ccaactgttg tcctcttgtg
    10681 tagggcagat taactatacc ttactcaccc gtgcgccact aatccacttc tagcaagcta
    10741 gaagcttcat cgttcgactt gcatgtatta ggcacgccgc cagcgttcac tctgagccag
    10801 gatcaaactc tccataaaaa attatagata gtttaatctt tttcttcaaa gaaaaagtta
    10861 tgaaagatta aaagaaaagt ttttaatctt tttaattatt agattgaata gattttacat
    10921 aattgcttat gcctaaatct gttctggctc aatcgatcac ttatttagat ttcaaagatt
    10981 gactaataag atttgaataa caatactaat ttaaaagaac aaaacaaaaa atcattttta
    11041 aaagaaaagt ttttaaatta aaaaacaaga tttataaaaa agcttttagt ttataagata
    11101 aaaaccaaaa gagttaattt ataaaatcta ctaagctagt gaaactttat aatttaaaag
    11161 attttaagtc cttttttcaa aaaaaaggaa atgaaagtat aaccaattaa acttaaaagg
    11221 ggattaaaca aaggattaaa tagtataaat atttgtgtaa gtatttatat aagtatttgg
    11281 tgggttgaaa aatgggggct atattttaga gcactcgtaa tttttatttt ttatattaac
    11341 aaattgacct ttaagtgttt taaagtctgg aatataagca taaccgctaa gcgtatctat
    11401 aacgatacaa agagcatgct tttttgataa caaacgtata atgcaatctg aattattctt
    11461 tgctaaagtt ttttcatatg cataattggc attttttaac ggagaataca ctctgcccat
    11521 ttcatcaaat actaatctgg taaatctcga acaagatcct ttgaattcaa ccttttctat
    11581 tccgaatctt tttgtaatat taaatctttg tgtagttttt tcatcatctt tactaataac
    11641 cccactttga cctgaattca ttaatttgtt atgattgatt acatcaacag caatttctct
    11701 atctatattg atttcagttt tacctaaatt agcatttcca tcgccatttt tatccaagaa
    11761 aatagtatat gtttgatcat aacctgtagc agctgatttt ataaaataaa tctgccattt
    11821 acttttaaac cactctcttt ttgcaatagt caactcatca actcttatac cttcttgcat
    11881 catggctaaa ctttgggtat attggatatc attaagaatt tgtatcgcac cttctagtag
    11941 attgtctttt tttaagtaaa gactgcctaa attaaaaact atacctaaaa tgagaattat
    12001 aaacacaaat tccaacaaac tgaaagcttt aatcatagtt taaaatctga tatacttttt
    12061 catattttcc aagttttact ttaacaattt ttttgtccat atcatgctta tcggcttgtt
    12121 ttaaagcttt taaataaaac ttattgctat tttttattcc ataaaatcgc aatctttttt
    12181 gcaaacttgg ggctgttgca agctctaaaa catcttgttt ttttaattct agtgccaatt
    12241 ctttagcaaa atgataatta ttggcaaaat gacgatttgg attgtttata aaataataca
    12301 ataattgatt agagacgatt aaaaagtaac aaaatatcaa aaaaattata gaacattcta
    12361 taaagatttt ataccttaat cgaaaaactg gtaatctcac cctataactt tgcattaaag
    12421 tttttataag caaaggagtg caaataacac aaaaaggcaa aaaatcatct aaaaaaagtt
    12481 tttgtcttaa agaaagcaac aaacaaaata caaatgttac gctcattaaa aaccataata
    12541 aatttttata tttttgaaaa gtcaaacgat aaatagtata aaaaaaatac acaaaaacca
    12601 aaggagaaaa acatgcagca aaaattccta aggtatctaa aaaataacct cttggacgac
    12661 cacctgtatc aaaaccataa aaactgatac tcgctccaaa caaaacaaga gataaggtaa
    12721 ataaaatagc atttctttta taaatcccaa aaaagaaaaa agttaaaaat aaaatattaa
    12781 aagatttatc aacaaataat actataatca ataatatata aaaaagccat tttttttcat
    12841 attcgtaagc acataatata gcaagggtta aaaaaatcac caaagatgcg gcattaacca
    12901 gtaaagcact tgcaacagta cccggcaata aaacaaataa caataaagaa aaaaaagcat
    12961 caattttagt tttagtatat tttaaagcta gcaaatacaa aagcaaacaa cttaaaaaat
    13021 gaaaaaataa aaaaggaagc cttaaaccaa aatcattttg cccaaaaata aaagttccaa
    13081 aatgagatat ataataaagc aaactatgag aaaaaataag tgatttaccc tgctcaccaa
    13141 aataaatatc agcttcatca gcactaatac tcagtgttga aattccataa agcaaagcca
    13201 acaaatcaag actaagtaaa atgatgataa gtttataatt tttgattttt tccataatga
    13261 aaattttaca aaattaaact taaaatatca atgcaaatca tataaatatc aaatatctta
    13321 aaaattaaca tcaaattgat tttagttttt ataagtataa ttttaaacaa aaaaggcaaa
    13381 aatgcaaact attgatcaaa tttttcaaac acaaatcgat attaaaaaat ctattttctt
    13441 atcttttctt tgccctttta aagattttaa atttttaata gaaacgctaa aaaaagaaca
    13501 tccaaaagct gttcattttg tctatgctta tcgtgtttta aatgatttta atcaaattgt
    13561 agaagataaa agcgatgatg gagagcctaa aggaacttct ggaatgccaa ctttaaatgt
    13621 tctaaggggc tatgatctta tcaatgcggc tttaatcact gtaagatatt ttggtggtat
    13681 aaaacttggt acagggggac ttgtaagagc ctatagcgat gcggcaaatg ccgtgatcaa
    13741 taattcttct ttactttcat ttgaattgaa aaaaaatata accattgcta ttgatttaaa
    13801 aaatttaaat cgttttgaac attttttaaa aacttattct tttaatttca caaaagattt
    13861 taaggattgc aaagctatat tacatatcaa attaaatgaa aaagaggagc aagaatttga
    13921 aattttttgt aaaaattttg caccttttga aatagagaaa ttataaattc ttgcaagtaa
    13981 atacaaaagc tccaaaatgg agcttttgat taaattgcgt tcaataaatc atttaacaaa
    14041 gtattattct tactttgttc atttgcacct tgttgcgcaa gatcattgtg aacgctagca
    14101 ctttgagctc tcatagacaa ctcgccttca ttttgtctaa aacgataagc gtaaacattt
    14161 gacatttgag cataattact taaatttgaa tttgagtttt gcgcattact ttgaaaacta
    14221 ctgctagaat ttaaagcatc tccgcttgac ttctcatccg ccttatttaa catatccata
    14281 aaatcagaat ctccagatga agaataatct tcaacctgtt tatccacctg tttatactga
    14341 ccactaatag catcgtattc atacgagcta atcgttctat aatttacctg catagttttc
    14401 tcctttcaaa atatgcaaaa actatacaag caaaaagcgt tcctttttat gtaaaaatca
    14461 atgtttttta atcatggtga gtaggcaaat gctccacatc aagctcatta ttggctataa
    14521 attcttcctt ggctttttta cagttttcat cacgcatttt gcggtattca ttacgaatgg
    14581 tgatttcttt atcgcttaga ggtctatctt ctaaaaaact gatatgaaaa taagtatcat
    14641 cgctctttga ataagtttta taaaaatcta tatagtcaaa ataatccttg ccattatcaa
    14701 actctacgac ttcttctata taaatcgtag gcccaaaacc cttgtgattt tgtgtataat
    14761 gcccaaaacc tgcgctgtat tgaattctaa atttagccat cattttctcc taaaaattct
    14821 tgataagttc cacgaaaatc tgtaagctta ccattttcta aatgccaaat tctattagca
    14881 aaagcagaaa ctaactccct atcgtggctg atacaaagca ctacaccttt gaaattatac
    14941 aaagcttcac ctaatgcaat aatactttca agatctaaat ggttatcagg ttcgtctaaa
    15001 agcaagaaat tcggacgctc tagcattaaa cgagaaagca ttaaacgatg tttttcaccc
    15061 ccacttaaac ttgctgccat tttttcttga tcgctgccac taaaaagcat tctacctaaa
    15121 cacttgcgga tttcatctag atctttaaat ttttcactca tcagccattc ataaagtttc
    15181 aaattttcac aaattaaatt acttgtatct tgaggaaaat atccaagttc tatagttgcc
    15241 ccaagatgta tagatccact atctggactt atagcatggg cgatgatttt tgctaaagta
    15301 cttttaccca caccatttgc cccaatcaaa gcgattttat catttttttc tatttttagc
    15361 tccaaatttg aaaacaattg tttatcataa gccttgccta tacctttaat ttctaaaact
    15421 tcattaccta tttcacgatt ggttctaaat actatactag gatctctacg gcttgaaatt
    15481 ttaatctctt caagctctag tttttcaagc gccttagcac ggcttgtggc ttgttttgct
    15541 ttagaagcat ttgcactaaa acggcgaatg aaattttcta attcttctct ttcttttaag
    15601 gttttatcgc gtttaagctc agcttgtttt gccaaaagcg ttgaagccat ataccaatca
    15661 tcataatttc ccgcaaaatc acgaatttgt ttaaaatcca catctaaaat tcttgtgcaa
    15721 attttattta aaaaatgcct atcatgagag atgacaacca aagttccttc atgtcttaaa
    15781 agttcatttt caagccaaga aatcacctct aaatcaaggt tatttgtagg ctcatctaaa
    15841 aaaagtacat cggcacctaa aaacaaaact tgagctaaca aaactttaaa tttatccgca
    15901 ctttgtaagg tgctcattaa agcatcgaaa tctttaatct ttaaagaact taaaattttt
    15961 tcacaacgtg tttcacaatc ataatttgga tcttcttcag ccgttattat ctcaagctca
    16021 cctaaacgct cattgatctc atcagtaaat tcctcgctca tataaagctt ttctttttct
    16081 tttaaggcct catataaacg cttatttgca cacatcactg catctttgat ggtgtagttt
    16141 tcaaaagcaa attgatcctg tcctaaaact gcgattttca agccttcatc aaatactatt
    16201 tcaccactac ttgactcaat ttctcctgaa agaattttta aaaaagtcga ttttcccgca
    16261 ccattagcac cgataagtcc gtatctttgt cctcgaacaa gttttaaatt aacattttca
    16321 aataaaagct gatttgcaaa acgcatagta agatttttta cttcaaccat gattttcctt
    16381 aaatttttta cttataaaaa tttttaagaa attgtatcaa aaaaagactt gaaattaatt
    16441 gagtataaaa tattagtaag tcatgaaatt aattctattg acttacttta ataaaaatat
    16501 tattggaaat ctccattgat ataagttata tctgtaattt tcacttgatt tatgttagaa
    16561 accttataaa caacactcca aagacctttt ctctgttccc cttttaatgc agcattaatc
    16621 gtagccatac aagaatcaaa attaagatca aaatttgaaa tggaattaat ttcgatcata
    16681 tcagtgtaat ttaccattcc atcatgcttg gctatttcct tgaggccttt tgcataatct
    16741 tcataatcaa tcccttgggc tttaagtccg gataattcat aaagattttt aaaaatttca
    16801 ctaggaattt tttctttaag atttgaaaca actgccgtat tatcacattt gtctaatgag
    16861 ttggcctgaa gcaaggcaaa ccccattaag aaaaataaaa ttactttttt aaacatatct
    16921 aaactcctct aatttttagg ttttgctact aaaataccat ctttatattc ttcttctctt
    16981 acaatctccc cttttttata ttctctaaag actccatttt taagtccatt tttataattt
    17041 tcttcgtctt ctaaggcgcc attttcatca taacgctttt gtactccatc aaatttacct
    17101 ttattatcaa aattataatc acacattaaa gttccatttt cataatattc cttgtaatta
    17161 ccttcaaatt ctggcatacc atcttcatta tagccaagta gttttccctt tgctctcata
    17221 tttccattct cataatagct tgcaaaatca ccatatccgc gattatcttt aaaatgcacc
    17281 tcctcaagta attgcccatt tctagaatat tccctgctaa ttccatcttt ttttccattt
    17341 ttataatttt cttcagctct tagctgacca ttgtcataaa aagctctttt taacccatgt
    17401 attcttgaat ctttattata gggaatttct tcttttaaat ttccatttgg atatttgttt
    17461 tgctgaactc tagccacatc gctaggttgt ccaggaaaat cacttccaca accacttaac
    17521 aacatcgcaa ttaaactaca aatgcttaaa aattttgtca ttttttctcc tatttctcat
    17581 ttttttcttt aataataata gtttgcttaa aacttcccgt aaaagaccat attaaacaaa
    17641 caagccaaac aataatagtc caaccaaaaa acaaatttag caaagaaatt atcagccaat
    17701 tagaatgctt tctgctcaaa ccaataatag cgggcaacat gtataataca aaca
//
LOCUS       DAPIWB010000037        16954 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.038, whole genome shotgun sequence.
ACCESSION   DAPIWB010000037 DAPIWB010000000
VERSION     DAPIWB010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16954)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16954)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16954
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.038"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            134..1915
                     /locus_tag="RJ266_001017"
     CDS             134..1915
                     /locus_tag="RJ266_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoX family phosphatase"
                     /protein_id="HDV7354770.1"
                     /translation="MERRLFLKGSALGSMVAFFASSNLSAVMLKDKNLLGFKAVSAST
                     QDKVIVPQGYEAKVLISWGDPLFSKAKPYDENKIIDMNAVKNAHLVFGDDNDGMSFFP
                     LSKNRGILAVNNEYINPEIMFNHHGKNLSKEDVLYEQASVGVSILEIEKKGDDWTVVL
                     DSKYNRRIDANTKMQVSGAAKKEVLKNEKFVHGTFANCANGQTPWGTYITCEENFENF
                     FGSSDENLEFNDSLKRYGFNKTSLYGWEKFDERFDLAKNIDEANRFGWIVEINPFDAK
                     STPVKRTSLGRFKHENAEIIVEKDGSVIVYMGDDEMNEFIYKFVSKHKYKKGTDTSKI
                     LDEGTLYVGQFNGKVGDFKGQGKWIALEYGKNSLDEKNGFKSQAQVLINTRLAASIVG
                     ATPMDRCEWIASHKQSGSKEVFATLTNNKNRQEPNAANPRTKNVYGQILKWMPKNSHK
                     DDDFTWEIFALAGNPDNQQGLYKGSNNITSENKFNSPDGLKFDRDGRLWIQTDGSYSN
                     KDEYEGMGNNCMLAANPKTGEIRRFLTGPIACELTGIAFSEDYTTMFVGIQHPGEGLK
                     GSTFPYGKTPRSSVIMIRKLDGGVIGS"
     gene            complement(1953..2891)
                     /gene="trxB"
                     /locus_tag="RJ266_001018"
     CDS             complement(1953..2891)
                     /gene="trxB"
                     /locus_tag="RJ266_001018"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HDV7354771.1"
                     /translation="MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSS
                     EIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGKTE
                     LAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEA
                     LYLANICSKIYLIHRRDEFRAAPSTVEKVKKNEKIELITSASVDEVYGDKMGVAGVKV
                     KLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGL
                     FAAGDLRKDAPKQVICAAGDGAVAALSAMAYIESLH"
     gene            complement(3025..3339)
                     /gene="trxA"
                     /locus_tag="RJ266_001019"
     CDS             complement(3025..3339)
                     /gene="trxA"
                     /locus_tag="RJ266_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HDV7354772.1"
                     /translation="MGKYIELTSDNFAQAKEGVALVDFWAPWCGPCRMLAPVIDELAN
                     DFDGKAKICKVNTDEQGDLAAEFGVRSIPTLIFFKNGEVVDQLVGAQSKQAISDKLNS
                     LL"
     gene            complement(3396..3734)
                     /locus_tag="RJ266_001020"
     CDS             complement(3396..3734)
                     /locus_tag="RJ266_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HDV7354773.1"
                     /translation="MGLKAYLDGILGEDKACKFLKKQGFEILKRNFYSKFGEIDIIAK
                     KDEILHFIEVKFTQDDYEVSERLDRKKLEKILKTIEFYHLKNGISSDFQIDLICIKND
                     VIQFCENISF"
     gene            complement(3734..4981)
                     /locus_tag="RJ266_001021"
     CDS             complement(3734..4981)
                     /locus_tag="RJ266_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HDV7354774.1"
                     /translation="MKVAILGYGTVGSAVVKFLLENDKLIRARCGQSITPVIALARSP
                     KKNALIPITHSVAEILNADVDVFVELMGGVDEAFKIVSEILKKKKAVVTANKAMLAYH
                     RYELENLAKNLAFGYEASVAGGIPIIKVLKEGLSANNILAIKGILNGTSNYILSSMSQ
                     KNMSFKQALQIAQNLGYAEADPTFDIEGQDAAHKLLVLSSIAYNLKAKPEDILIEGIS
                     EIAPEDMYFANEFEFTIKLLGIAKVRENKVELRVHPTMIDKEKMLAKVDGVMNAISIN
                     GDLLGESLYYGAGAGGEATASAVISDLMDIARDQVKAPMLGFVNTLEYELLSKDEIYT
                     KYYLRVKVEDKIGVLSKITQLMSENNISIDSFLQKPKKNDENYSTLFFTTHLTYEKSI
                     QNLLEILRKQDFIKTKPFMMRIE"
     gene            complement(4985..6187)
                     /locus_tag="RJ266_001022"
     CDS             complement(4985..6187)
                     /locus_tag="RJ266_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LL-diaminopimelate aminotransferase"
                     /protein_id="HDV7354775.1"
                     /translation="MFDEIRFNTIERLPNYVFAEVNAIKMAARRAGEDIIDFSMGNPD
                     GKTPQHIIDKLCESANKDKTSGYSTSMGIYKLRLAICNWYKRKYNVNLDPENEVVATM
                     GSKEGFVNLARAIINPGDVAIVPTPAYPIHTQAFIIAGGNVAKMPLAYNEKFELDENQ
                     FFENLHKTLNESIPRPKYVVVNFPHNPTTVTCEKSFYERLIATAKKERFYIISDIAYA
                     DLTYDDYKTPSILEIEGAKDVAVETYTLSKSYNMAGWRVGFVVGNKRLVSALKKIKSW
                     FDYGMYTPIQVAATIALDGDQTCVDEIRATYDKRMHILLEAFENAGWKLQKPRASMFV
                     WAKLPESKRHLKSLEFSKQLLQRASVAVSPGVGFGEAGDEYVRIALIENENRIRQAAR
                     NIKKYLKE"
     gene            complement(6199..7005)
                     /locus_tag="RJ266_001023"
     CDS             complement(6199..7005)
                     /locus_tag="RJ266_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354776.1"
                     /translation="MVKKIIILTLWVNISFAISSLELAKNLVNNPSKNSQLELLFSNN
                     SYIDNNGNCDIAKISQILKTNSLIALTLSNPQSLKLNFKAKADEVMFFKILSDVLTDA
                     GYIYFIPTDLILREGNIDYTIQVESQYVLDPGTLYNLLKENSVYIDNIKRIGAYDYEY
                     DLNFSNAVLKTNTNVNLNTPKSLEKPLKDYVLDLKNATNLIIDANDLDNWFPKIFFLD
                     KNLNLIKAVKSENKNNHFSELIPNGAIYAIVSDMYSLDNIRRGLKITLKK"
     gene            complement(6999..7937)
                     /locus_tag="RJ266_001024"
     CDS             complement(6999..7937)
                     /locus_tag="RJ266_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354777.1"
                     /translation="MLNWKKIQELNLKEVAAKTQIELDFLEALVEKNFAVLSRFNVKG
                     FVKILSREYELDFSDFNEEYEAYLNENNPTPQTKSKMITPKLDAYSQKSFNTWPFLIV
                     LIVLVIIGSGIYYFDTLRTFFKDEQNNTSATVIDIIGQAQENLKSLGGNNVVVIDNNK
                     AQETNQTESVLPSQNISLQENDKNISIENNISENNTTLLDEEKNTQIQEDTNTPKTDS
                     LKEAHFKTSTKIWIGLIDLKSLKKTSFVKEKDFNISLDKDQLILTGAAALTMFDQENK
                     EQKFPVGISKRFLIKDGKITSISAAEFVKLNKGKEW"
     gene            complement(7930..8613)
                     /gene="rlmB"
                     /locus_tag="RJ266_001025"
     CDS             complement(7930..8613)
                     /gene="rlmB"
                     /locus_tag="RJ266_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HDV7354778.1"
                     /translation="MIVYGKQIFFYILEYHKDCINELYLAKECDKITFSKIAKSGFKI
                     KKLDFKTAQAYAKGGNHQGFLLDIKESSFANLNEIKKNDFIVMLYGISDVGNIGAITR
                     TAYALGVGALIFIGEKLAMEGVIRTSSGAALDLPIAISNDALSVINELKQVGFYFYAS
                     DGSGKEIHSVKISNGKKVLVLGSEGFGLSSKIVKKCDECVGIAMKNNFDSLNVSAAFA
                     ILCDRMLNA"
     gene            complement(8627..9451)
                     /gene="rsmI"
                     /locus_tag="RJ266_001026"
     CDS             complement(8627..9451)
                     /gene="rsmI"
                     /locus_tag="RJ266_001026"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HDV7354779.1"
                     /translation="MLYFIPTPIGNLSDISFRALELLKTCDLVFCEDTRVSKSLISLL
                     NTKFHTDIHISKFIALHSHNEKEVLASIDLKIFEKNVAYLSDAGMPGISDPGKALVEF
                     AQENNITYEILPGANAALVALVSSAFCQKEFIFIGFLANKGKERQKDIEKILNFPYPS
                     IIYESPKRILSLVEQIMILDSQREIFLIKEISKKFEKKFKGNAKELSEILKKSNLNGE
                     WVVVLQSKEQNFLQNTLCEKDIMDLELSLKAKAKLLSKINGKNAKEIYQKLLLSQD"
     gene            complement(9454..9654)
                     /gene="rpmE"
                     /locus_tag="RJ266_001027"
     CDS             complement(9454..9654)
                     /gene="rpmE"
                     /locus_tag="RJ266_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HDV7354780.1"
                     /translation="MKKEIHPEYVECKVSCACGNTFTTKSNKAELRVDICSNCHPFFT
                     GSEKIVDAAGRVEKFKKKYAMQ"
     gene            complement(9733..10389)
                     /locus_tag="RJ266_001028"
     CDS             complement(9733..10389)
                     /locus_tag="RJ266_001028"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HDV7354781.1"
                     /translation="MQFLYNKQAGEEFIQLQGENFNHLKVRRVKENSELNLRNLQDNF
                     LYNYTITNLTRNSCTLKFLNKKSQNIKQSELNLALAIIDIKILEKTLPFLNELGVKKL
                     HLVFTNFSQRNFKIDLERFEKIIISSCEQCGRNTKMDLIIHQSTQEFVQKFPNAIMVD
                     FQGEQQSHFDEKELYFIGPEGGFNNDERLLFNRKISLKSSNILKSQTAIIAIASKILL
                     "
     gene            complement(10391..10798)
                     /locus_tag="RJ266_001029"
     CDS             complement(10391..10798)
                     /locus_tag="RJ266_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354782.1"
                     /translation="MDQSYEFFLALHLYSLYASGFLMLFYLILTQGNFKTEFIFIRRI
                     RLFLPIYYLFLALIIFTGCLLSAMKQFQMNVNIWVMIFSWILIFALAIFHFVCFKKAR
                     RFRKYATFRWISCLILPFEIFLLFLPFLIERYL"
     gene            complement(10798..11223)
                     /locus_tag="RJ266_001030"
     CDS             complement(10798..11223)
                     /locus_tag="RJ266_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HDV7354783.1"
                     /translation="MQKAKILIALSFFLLVLSACSNDEKNISKTQNTDQEVVQIEQND
                     EKTELSDSNLPLPVDDEAQSSDDEHEVNPSIINSLYKQKCATCHGEKGELKPKNSTAI
                     KTLSNKIFIQKIKTIKDKNHSFLSDEQIQNLADFINKGK"
     gene            complement(11223..11804)
                     /locus_tag="RJ266_001031"
     CDS             complement(11223..11804)
                     /locus_tag="RJ266_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HDV7354784.1"
                     /translation="MIIRKLFEFENAHIVRFCSSKRCKSSIHGHSYKVEVLLESKYLD
                     NAGMVYDFGLLKTYIRQIIDSFDHAITLFKYDDAKYLEEMKKYSSRWICLPVNVSAEN
                     FCRVFFILIDALLKQTKMVNGEQGVTLQSIIVHETRTGYAQGFREDAYSELMPKISLQ
                     DIEFSNGIKVEWNDIDFYNKLKNEEIFINPKEI"
     gene            complement(11801..12544)
                     /locus_tag="RJ266_001032"
     CDS             complement(11801..12544)
                     /locus_tag="RJ266_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HDV7354785.1"
                     /translation="MQLVESFLSIQGEGKYNGKLAIFMRFAGCNFNCLGFNVKISKND
                     KTLIGCDTIRAVFTKDFKESYETLNANELLKRVIKLKQDFDPIVVITGGEPLIHYENP
                     EFIKFIQMLLKNKFEIHFESNGSIEIDFDRYPFYKECIFALSVKLQNSGIKKDKRLNF
                     KALKAFKNYAKDSFYKFVLDANTLDNSFLEINEILKEAPNQIFCMPMGENEQNLKKNA
                     QKIAEFCIKNGYNYSDRIHIRLWNDKEGV"
     gene            complement(12547..13509)
                     /gene="moaA"
                     /locus_tag="RJ266_001033"
     CDS             complement(12547..13509)
                     /gene="moaA"
                     /locus_tag="RJ266_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HDV7354786.1"
                     /translation="MLIDQFGRKINYLRISVTQRCNFRCLYCMPKIPFDYQPKENLLS
                     FEELFLFVKAAIDEGIEKIRITGGEPLLRKDLSIFIKMISDYKSDIDLAITTNGFLLK
                     DFAKDLKNAGLKRLNISLDTLDHKKAKTLAQKDVLDSVLSGIDEALNLDLKVKLNTVA
                     LKNLNDDELISLLEFAKSKKAQIRFIEFMENTHAYGKLQGLKRDEIIQILSQKYQIQL
                     IKKDEKAPVSIYKADDYEFGIIDPHSHEFCDSCNRIRLSAEGLLIPCLYFDEALSIKE
                     AVRKGDIKAAVEILQEVLRNKPEKNKWSVVDNETSSRAFYQTGG"
     gene            complement(13522..14037)
                     /locus_tag="RJ266_001034"
     CDS             complement(13522..14037)
                     /locus_tag="RJ266_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354787.1"
                     /translation="MSDDVLYLVFIIVLLISMLAYMNIKERENNAKIAKLQNVIEDIT
                     KELHYFRKELGVKDDSEEDEDYKTSLLKEEIMIELDKQISSKITPVLRTLKTMEHIIE
                     DFQNEQQNRLLNLEQKAQSMAKLTPNYDTEEQKIENLFKEGKSIEQIAKDLRIGTGNV
                     ELVLKFKKLIK"
     gene            complement(14034..14531)
                     /locus_tag="RJ266_001035"
     CDS             complement(14034..14531)
                     /locus_tag="RJ266_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354788.1"
                     /translation="MELALFKAGFEAHLECCEIENNRFLGEYLKLGAISQILKWKKLA
                     LRIDFDEGEKIIFDLLLSLKEDILRLENSLDKNKELIPLKQKGVIESLNFEYLNFLDT
                     ILEEDKEYYLRFDLNNQKIAIFIKAQSQTLAKIIKIKPEDKMAFDAFVVEIQRNMIRN
                     KKGQE"
     gene            complement(14522..15406)
                     /locus_tag="RJ266_001036"
     CDS             complement(14522..15406)
                     /locus_tag="RJ266_001036"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate polyprenyltransferase"
                     /protein_id="HDV7354789.1"
                     /translation="MNTFWIKFKDILELVVFKHSIFALPFLFSSMIVASKLANDTAWF
                     GFKALILGIICAVSARNFAMATNRLMDEDIDKDNPRCANRPNVSGKIGRKSVWIFIII
                     NALIFISCSYFINTLAFYLSFPVLLVLAIYSAFKRFSSLAHLVLGFCLGLAPIAGSVI
                     IMGEIHIYSVILCLGVTFWTAGFDLLYSLQDMEYDKKIGLHSIPAKFGSKATLFISAF
                     CHILAVLFWLLFVWEVWGVALGKIALIGVIISGIILALEHKIVHKNFAHIDRAFFTLN
                     GYLSIIFFIFIWIDLLWN"
     gene            15477..16346
                     /gene="miaA"
                     /locus_tag="RJ266_001037"
     CDS             15477..16346
                     /gene="miaA"
                     /locus_tag="RJ266_001037"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HDV7354790.1"
                     /translation="MFFEIALIGTTASGKTYIANTLAREFNAVVLSLDSLCVYKEINI
                     ASAKPSQDDLASIKYFGVNLLSVNEHFNVELFIREYQKAKEFALARNLPLIIVGGTGF
                     YLKTMIDGLSEKTLESKSSLNNDEIYALLLNIDPNYKIEKNDTYRLKKWLGIYEQTRE
                     IPSEFLKRTQKTGVLKDIEIYELAWDKEILKKRIKTRTKEMLDNGLLDEAKILFSKFD
                     HKLKALNSIGLKECKEYLDGEISFKELENLITIHTTQLAKRQRTFNKKFQSKALEFDK
                     ALATLRMKFSIEK"
     gene            complement(16332..16895)
                     /locus_tag="RJ266_001038"
     CDS             complement(16332..16895)
                     /locus_tag="RJ266_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HDV7354791.1"
                     /translation="MDFYSLIFLSCALGMDAFAVSLCKGFSVKKLHLKHYLIVGIYFG
                     GFQALMPTIGYFIGITFASFIASIDHWIAFILLSLIGLKMIKESLENENCDSNANQFG
                     FKTMLALAIATSIDALAVGVSFAFLNVNLLLAIFLIGIITFILCIIALKTGNKFGIYL
                     KNKAELLGGLVLIILGVKILIEHLFFD"
BASE COUNT         5820 a         2713 c         2242 g         6179 t
ORIGIN      
        1 taatcattta cacctagtga aaaactaggt gtaaattttt ccttcaattt aaatttttca
       61 tcaaagtttc taaaaagttt ccaaatattt ttatacttcc attgttttaa attttaatat
      121 ggagtaaaaa caaatggaaa gaagattgtt tttaaaaggt tcagctttag gttctatggt
      181 ggcttttttt gcaagttcaa atttaagtgc tgttatgctt aaggataaga atttgttagg
      241 ttttaaagct gttagtgcaa gcacacaaga taaagttata gtaccgcaag gttatgaagc
      301 aaaggtttta atttcttggg gtgatccact ttttagtaaa gcaaaacctt atgatgaaaa
      361 taaaatcatc gatatgaatg cagttaaaaa tgctcatttg gtttttggag atgacaatga
      421 tggtatgagt ttttttccac tttcaaaaaa cagaggaatt ttagccgtta ataatgaata
      481 tataaatcct gaaatcatgt ttaatcatca tggtaaaaat ttaagcaaag aagatgtttt
      541 atatgagcaa gccagtgtgg gtgtgagtat cttagaaatc gaaaaaaagg gtgatgattg
      601 gactgtggtt ttagactcta agtataaccg cagaatcgat gcaaacacta aaatgcaagt
      661 aagtggagca gctaaaaaag aagttttaaa aaatgaaaaa tttgttcatg gaacttttgc
      721 aaattgtgca aatggacaaa caccttgggg aacttatatc acctgtgaag aaaattttga
      781 aaattttttt ggaagttcag atgaaaatct agaatttaat gactctctta aacgctatgg
      841 atttaacaaa actagtcttt atggatggga gaaatttgat gaaagatttg atttagctaa
      901 aaatatcgat gaagccaatc gttttggttg gatagtggaa atcaatcctt ttgatgcaaa
      961 aagcacacct gttaaaagaa cttctttagg gcgttttaaa catgaaaatg cagaaattat
     1021 cgtagaaaaa gatggttctg ttatagttta tatgggtgat gatgagatga atgaatttat
     1081 ttataaattt gttagcaaac acaaatacaa aaaaggtact gatacaagta aaattttaga
     1141 tgaaggtact ttgtatgtag gacagtttaa tggcaaggtg ggagatttta aaggacaggg
     1201 aaaatggata gctttagaat atggcaaaaa cagcttagat gaaaaaaatg gttttaagtc
     1261 tcaagctcaa gtactcatca atacgcgtct tgctgcaagc attgtaggtg caactcctat
     1321 ggatagatgt gaatggatag caagccataa acaaagtggt tctaaagagg tatttgcaac
     1381 actaacgaac aacaaaaatc gccaagaacc taatgcagca aatccaagga ctaaaaatgt
     1441 ttatggacaa attttaaaat ggatgccaaa aaattctcat aaagacgatg attttacttg
     1501 ggaaattttt gctcttgctg gaaatcctga taaccaacaa ggcttatata aaggctcaaa
     1561 taatattaca agtgaaaata aattcaattc tcctgatgga cttaaatttg atagagatgg
     1621 aagactttgg atacaaacag atggatctta ttctaataaa gatgaatacg aaggtatggg
     1681 aaataactgc atgctagcag caaatccaaa aacaggggaa atcagacgct ttttaacagg
     1741 gcctattgct tgtgaattaa cagggattgc ttttagtgag gattatacta caatgtttgt
     1801 aggcatacaa catccaggag aaggtttaaa aggtagtact tttccttatg gaaaaacacc
     1861 aagatcgagt gtaataatga taagaaaact tgatggtgga gtgataggaa gctaaataaa
     1921 aataaagttg cttttagcaa ctttataaaa tcttaatgca agctttctat ataagccata
     1981 gcacttaatg cagctacagc tccatcacct gcagcacaaa taacttgctt aggcgcatct
     2041 tttctaaggt cccctgcggc aaaaagtcca gcaacgctag tttgcatttt aagatcaaca
     2101 cttacttgcc caccttcttc catattgcat aaaaacttac tatcgtcttg ttttaaaatt
     2161 tcatttctta cgttaagacc aacaaaagta aaaattcctg gaacatttaa atctctaata
     2221 ctaccatctt ttaattttac ttttactcca gcaacaccca ttttatcgcc atatacttca
     2281 tctacacttg cgctagtaat gagttctatt ttttcgtttt tcttaacttt ttctactgta
     2341 gatggagctg ctctaaactc atctctgcgg tggataagat aaatcttaga gcaaatattt
     2401 gctagatata aagcttcttc taaagccgta tctccaccac ctaaaactgc aacttcttta
     2461 tttttataaa aaaatccatc acaagttgca caagtgctta caccttttcc aaaaaattca
     2521 tcttcgccct taaaacctgc tttttttgga gctgagcctg tacaaactat cacagcttta
     2581 gcaagttctg ttttaccacc ttctaatttg atggtaaaac ttccatcact attttttaaa
     2641 atttgttcta ctccaaccat ttcatgtttt aaaccaaaac gcatacattg ttcactccaa
     2701 ggagccataa aagaaattcc atccataact tgggctacac ctggataatt ttctatctca
     2761 gaacttgagg taatttgtcc accaggcata cctttttcaa acattactac atttttaagg
     2821 ccacctctag ttgcataaag tccggcacta agtccagcag gacctccacc tatgattgct
     2881 acatctaaca tttatatttc ctttatattg aattttatta ttaataatga tataaaaatt
     2941 attcttaata gtagttaata aaaattatta tttagtataa atttgaaatt tttaagaaga
     3001 aggctagtta tactagcctt tagtttatag taaagagttt aatttatcgc taattgcttg
     3061 tttagattgt gcaccaacta gttgatctac aacttcacca tttttaaaga aaataagcgt
     3121 aggaatagag cgaacaccaa attcagctgc taaatcacct tgttcatctg tatttacttt
     3181 gcaaatttta gctttaccat cgaagtcatt tgcaagttca tcaataactg gagcaagcat
     3241 tctacaaggt ccgcaccatg gagcccaaaa atcaactaaa gctacacctt cttttgcttg
     3301 agcaaaatta tcacttgtta attcaatata ttttcccata atttttcctt tctttaattt
     3361 ttgtctaatt gtattttatt tttttaaata tcagcttaaa aacttatatt ttcgcaaaat
     3421 tgtatcacat catttttaat gcaaatcaga tcaatctgaa aatccgatga aattccattt
     3481 ttaagatgat aaaattctat agtttttaaa attttttcaa gtttttttct atccaaacgc
     3541 tcggaaactt cataatcatc ttgagtaaat ttaacctcta taaaatgtaa aatttcatct
     3601 tttttggcta ttatatcgat ttctccaaat ttagaataga aatttctttt taaaatttca
     3661 aagccctgtt tttttaaaaa tttacaagcc ttatcttcac ctaaaattcc atctaaataa
     3721 gcttttaaac ccattattct atacgcatca taaaaggttt ggtttttata aaatcttgtt
     3781 tgcgtaaaat ttcaagcaaa ttttgtatgc ttttttcata agttaaatgc gtagtaaaaa
     3841 acaaagtact gtaattttca tcattttttt taggtttttg taagaaacta tcgatagaaa
     3901 tattattttc actcatcaat tgtgtgattt tagataaaac ccctatttta tcttcaactt
     3961 tcacccttaa ataatatttt gtataaattt catctttgct taaaagctcg tattctaaag
     4021 tgttcacaaa accaagcatt ggtgctttta cctgatctct tgctatatcc ataagatctg
     4081 aaatcacagc acttgcagtg gcctctcctc ctgctcctgc tccataatac aaactttcac
     4141 ccaacaaatc tccattaatg cttatagcat tcatcactcc atcaactttt gcaagcattt
     4201 tttctttatc tatcatagta ggatgcaccc ttaattctac tttattttca cgcaccttag
     4261 ctatacctaa aagttttatg gtaaattcaa actcattagc aaaatacata tcttcaggtg
     4321 caatttcact aataccctcg atcaaaatat cttcaggttt agctttaaga ttataagcga
     4381 tacttgataa aacaagcagt ttatgtgctg catcttgccc ttctatgtca aaagttggat
     4441 cagcctctgc ataacctaaa ttttgagcta tttgcaaagc ttgtttaaaa ctcatatttt
     4501 tttgactcat agaacttaaa atataattac tcgtaccatt taaaatccct tttatagcca
     4561 aaatattatt tgcacttaaa ccttctttta aaaccttgat aataggaatt cctccagcca
     4621 cacttgcttc ataaccaaaa gctaaatttt tagccaaatt ttcaagttca taacgatgat
     4681 aagcaagcat agctttattt gcagtaacaa cagctttttt cttttttaaa atttcactca
     4741 ctattttaaa agcttcatcc accccaccca ttaattctac aaaaacatct acatcagcat
     4801 ttaaaatttc tgcaacgcta tgagtaattg gaattaaagc atttttttta ggacttctag
     4861 caagagcgat cacaggagtt atgctttgcc cacatcttgc acgaataagt ttatcatttt
     4921 ctaaaagaaa tttaaccacc gcacttccaa cagtgccata accaagaatc gctactttca
     4981 taacttactc ttttaaatat tttttgatat tacgtgcagc ttggcgtatg cgattttcat
     5041 tttcaattaa agcaattctt acatactcat cacctgcttc gccaaaacct accccaggac
     5101 ttactgcaac actagcacgc tgtaaaagtt gctttgaaaa ttctaaactt tttaaatgtc
     5161 ttttgctttc agggagtttt gcccaaacaa acatacttgc tcttggtttt tgaagtttcc
     5221 agcctgcatt ttcaaaagct tcaagtaaaa tgtgcattct tttatcataa gttgcacgga
     5281 tttcatctac acaagtttga tctccatcta aagctatggt agctgctact tgaataggtg
     5341 tgtacatacc ataatcaaac caagatttta tttttttaag cgcactgact aagcgtttat
     5401 ttcctactac aaaacccacg cgccagcctg ccatattgta agattttgaa agagtgtaag
     5461 tttctaccgc tacatctttt gcgccttcaa tttccaaaat agaaggagtt ttatagtcat
     5521 cataagttaa atctgcataa gcaatatctg aaataatata aaatctttct ttttttgccg
     5581 ttgctatcaa tctttcataa aaacttttct cacaagttac tgttgttgga ttatgcggga
     5641 aattaacaac gacatatttt ggacgcggga tgctttcatt taaagtttta tgtaaatttt
     5701 caaaaaattg attttcatca agctcaaatt tttcattata agctaaaggc atttttgcta
     5761 cattacctcc tgctataata aaagcttgag tatgtatagg ataagcagga gttggcacaa
     5821 tagcaacatc tccaggattt ataatcgctc ttgcaagatt tacaaaaccc tcttttgaac
     5881 ccatagtagc tacaacttca ttttcaggat ctaggttgac attatatttt cttttatacc
     5941 aattacaaat tgctaagcga agtttataaa tccccatgga tgtagaatat cccgaggttt
     6001 tatctttgtt agcactttca caaagtttat ctataatgtg ttgtggagtt ttaccatcgg
     6061 gatttcccat tgaaaagtcg atgatatcct ctccagcacg tcttgctgcc atttttatcg
     6121 catttacttc tgcgaaaaca taatttggaa gtctttctat ggtattaaaa cggatttcat
     6181 caaacatttc ttaatccttt attttttaag tgtgattttt aaacccctgc gtatattatc
     6241 taaactatac atatcgctta caatagcata tatagcacca tttggaataa gttctgaaaa
     6301 atgattattt ttattttcgc tttttactgc tttaattaga ttcagatttt tatctaaaaa
     6361 gaagatttta ggaaaccaat tgtctaaatc atttgcatca ataatcaaat ttgtagcatt
     6421 ttttaaatca agcacatagt ctttaagggg tttttctaat gattttggag tatttaaatt
     6481 aacatttgta ttggttttta atacagcatt ggaaaaattt aaatcatatt catagtcata
     6541 tgccccaatg cgcttaatat tatctatata gacagaattt tcttttaaga gattgtaaag
     6601 cgttccagga tctaaaacat attgagattc tacttgtatg gtatagtcaa tatttccttc
     6661 tcttaaaatc aaatctgtag ggataaaata tatatatccg gcatctgtta aaacatcgga
     6721 taaaatttta aaaaacataa cttcatcagc ttttgcttta aaatttagtt ttagactttg
     6781 aggatttgat agtgttaagg caattaaaga attggttttt aatatttgag atatttttgc
     6841 aatatcacaa tttccattat tatctatgta agaattattt gagaataata attctagttg
     6901 agaattttta ctaggattgt ttactaaatt ttttgctaat tcaagacttg agattgcaaa
     6961 agatatatta acccaaagag taagaataat aatttttttt accattcttt acctttattt
     7021 aattttacaa attcagcagc tgaaatactt gtaatttttc catctttaat caagaaacgt
     7081 tttgaaattc ctacaggaaa tttttgttct ttattttctt gatcaaacat tgttaaagct
     7141 gcagcccctg ttaaaattaa ctgatcttta tctaaagaaa tattaaaatc tttttcttta
     7201 acaaagcttg tttttttaag gctttttaaa tctatcaaac ctatccaaat cttggtagag
     7261 gttttaaaat gtgcttcttt taaagaatca gtttttggtg tatttgtgtc ttcttggatt
     7321 tgggtatttt tttcttcatc gagtagggtt gtgttatttt cactgatatt attttctatg
     7381 cttatgtttt tatcattttc ttgtaatgag atgttttggc ttggtaaaac gctctctgtt
     7441 tgatttgttt cttgtgcttt attgttgtct ataacaacaa cattgtttcc acctaaagat
     7501 tttaaatttt cttgtgcttg tcctatgata tctataactg ttgcactagt attattttgt
     7561 tcatctttga aaaaagttct aagtgtatca aaataataaa ttccacttcc tataatcact
     7621 aaaacaataa gaacaatcaa aaaaggccaa gtgttaaagg atttttgact ataagcatct
     7681 agttttgggg ttatcatttt tgattttgtt tgtggagtag gattgttttc gttaagataa
     7741 gcttcatact cttcgttaaa atcactaaag tcgagttcgt attctctgct caaaatttta
     7801 acaaaacctt taacattaaa acgacttaaa acagcaaaat tcttttctac taaagcttca
     7861 agaaaatcaa gttcaatttg cgtttttgct gcaacttctt ttaaatttaa ttcttgtatt
     7921 tttttccaat taagcattta acatcctatc acaaagtatt gcaaaagcag cgctgacatt
     7981 aagactatca aaattatttt tcatcgcaat gcccacacat tcatcgcatt tttttacaat
     8041 tttagagctt aaaccaaaac cctcactacc caaaactaaa acttttttac cattgcttat
     8101 ttttacactg tgaatttctt ttcccgagcc atcgctcgca taaaaataaa aacctacttg
     8161 ttttagttcg tttattacac ttaaagcatc gttgcttatt gcaataggta aatcaagagc
     8221 cgctccgctg cttgtgcgaa ttactccttc catggctaat ttttcaccaa taaaaattaa
     8281 agccccaacc cctaaagcat aagctgtacg cgtgatagcc cctatatttc ctacatcact
     8341 aattccataa agcataacaa taaaatcatt ttttttgatc tcatttaaat tcgcaaaaga
     8401 actttcttta atatctagca aaaaaccttg atgatttcca cctttcgcat aagcttgagc
     8461 agttttaaaa tcaagttttt tgattttaaa accagatttt gcgattttgg aaaaagtaat
     8521 tttatcacat tcttttgcta aataaagctc attgatacag tctttatgat attctaaaat
     8581 ataaaaaaat atttgcttcc cataaactat catattaaaa ttttacctaa tcttgactta
     8641 aaagcagttt ttgataaatt tcttttgcat tttttccatt gatctttgat aataattttg
     8701 cttttgcttt taaagacagc tctaaatcca taatatcttt ttcacaaaga gtattttgca
     8761 aaaaattttg ctcttttgat tgcagtacta caacccattc accgtttaaa ttagactttt
     8821 ttaaaatttc agaaagctct ttagcattgc ctttaaattt tttttcaaat tttttactga
     8881 tttctttaat caaaaaaatt tctctttggc tgtctagaat cataatctgt tctactaaag
     8941 ataaaatacg cttgggggat tcgtaaataa tacttggata aggaaagttt aaaatttttt
     9001 ctatatcttt ttgtctttct ttgcctttat ttgctaaaaa accaataaag ataaattctt
     9061 tttgacaaaa tgctgagctt acaagagcaa ctaaggctgc atttgcacct ggtaaaattt
     9121 cataggtgat attattttct tgtgcaaatt ctaccaaagc cttgccagga tcactaatcc
     9181 ctggcattcc tgcatcgctt aaataagcta catttttttc aaatatcttt aaatcaatac
     9241 ttgctaaaac ttctttttca ttatgggagt gtaaggctat aaatttagaa atatgtatat
     9301 cagtgtgaaa tttggtattt aataacgaaa tcaaagactt acttactctt gtatcttcgc
     9361 aaaacacaag atcgcaagtc tttaaaagtt ctaaggctct aaaagaaata tcgcttaaat
     9421 ttcctatggg agtaggaata aaataaagca taattattgc attgcgtatt ttttcttaaa
     9481 tttctctaca cgacctgcag catctacaat tttttcactg cctgtaaaaa aaggatggca
     9541 atttgaacaa atatctactc ttaattctgc tttgtttgac tttgttgtaa aagtatttcc
     9601 acaagcacaa cttactttgc attctacata ttctgggtga atttcttttt tcattagttt
     9661 tccttaaaaa ttaaaacaat aagccgtgat tataaattat ttaacataaa aaagagatta
     9721 atttaagaaa agttaaagca aaatttttga agctatagct ataatagctg tttgactttt
     9781 tagaatatta gagcttttaa gagagatttt ccggttaaac aataatctct catcattgtt
     9841 aaatccacct tcaggaccta taaaatataa ttctttttca tcgaaatgac tttgttgttc
     9901 tccttgaaaa tcaaccataa ttgcatttgg aaatttttga acaaattctt gagtgctttg
     9961 gtggataatt aaatccattt tagtatttct accgcattgt tcacaagaag aaataatgat
    10021 tttttcaaat ctttctaaat cgattttaaa atttctttgt gaaaaatttg taaaaaccaa
    10081 atgtaacttt tttactccaa gttcatttaa gaaaggtaga gttttttcta aaattttaat
    10141 atctataatg gctaaggcta agtttaattc actttgtttt atattttgtg attttttgtt
    10201 taaaaatttt aaagtgcaag aatttcttgt taaatttgtg attgtatagt tgtaaagaaa
    10261 attatcttgt aaatttctaa gatttagctc cgaattttcc tttactcttc ttacttttaa
    10321 atggttaaag ttttcacctt gaagttgtat aaactcttct ccagcttgct tgttatacaa
    10381 aaattgcatt ttatagatat ctttctatta aaaaaggcaa aaacaataaa aaaatttcaa
    10441 aaggtaaaat caaacaacta atccatctaa aagtggcata ttttctaaat cttcttgctt
    10501 ttttaaaaca aacaaagtga aaaattgcta aggcaaaaat taagatccaa gaaaaaatca
    10561 ttacccagat attgacattc atttgaaatt gtttcattgc tgataacaaa caacctgtaa
    10621 aaataatcaa agctaaaaat aaataataaa ttggtaaaaa taatcgtatt ctgcgaataa
    10681 aaatgaattc ggttttaaaa tttccttgtg ttagtataag ataaaaaagc attaaaaaac
    10741 cgctcgcata aagactataa agatgtaaag ctaaaaagaa ttcgtaactt tgatccatta
    10801 ttttcctttg tttataaaat cagctaaatt ttgaatttgt tcatcactta aaaaactatg
    10861 gtttttatct tttatcgttt ttattttttg tataaaaatt ttattgctca aggttttaat
    10921 ggccgtgctg tttttaggtt ttaattcccc tttttctcca tgacaagtgg cgcatttttg
    10981 tttatataaa gagttgataa tactaggatt gacttcatgt tcatcatctg aactttgtgc
    11041 ttcatcatct acaggtaaag gcaggttgga gtcacttaat tctgtttttt catcgttttg
    11101 ttctatttgg actacttctt gatctgtatt ttgagtctta gaaatatttt tttcatcatt
    11161 agaacaggca gataaaacta ataaaaaaaa acttaaggca attaaaattt tagctttttg
    11221 cattaaatct cctttggatt tataaaaatt tcttcatttt ttaatttgtt ataaaaatct
    11281 atatcattcc attctacttt aatgccattg gaaaattcta tgtcttgaag tgaaattttt
    11341 ggcattagct cactataggc atcttctcta aaaccttgtg catagcctgt tcttgtttca
    11401 tgaacaatga tactttgtaa agtcactcct tgttctccat ttaccatttt tgtttgtttt
    11461 aataaagcat ctataagtat gaaaaataca cgacaaaaat tttcagcact tacattaaca
    11521 ggcaggcaaa tccaacgact tgaatatttt ttcatttctt ctaaatattt tgcgtcatca
    11581 tatttaaaaa gagtgatagc atgatcaaaa ctatcaataa tttggcgtat ataggttttt
    11641 aaaagtccaa aatcatagac cattccagca ttatctaaat atttgctttc aagtaaaact
    11701 tcaactttgt aagaatgtcc atgaatgcta cttttgcaac gcttagaaga acaaaatcta
    11761 acaatgtgtg cgttttcaaa ttcaaataat tttcttataa tcatacaccc tctttatcgt
    11821 tccaaagacg aatatgaatt ctatcagaat aattataacc attcttaata caaaattcag
    11881 caattttttg agcatttttt ttaaggtttt gctcattttc acccataggc atacaaaaaa
    11941 tttgatttgg agcttctttt agaatttcat tgatttctaa aaatgaatta tcaagggtat
    12001 tggcatctaa aacaaattta taaaaactat cttttgcgta atttttaaat gcttttaaag
    12061 ctttaaaatt taatcgttta tcttttttta tcccactatt ttggagttta acgcttaaag
    12121 caaaaataca ttctttgtaa aaaggatatc tatcaaaatc aatttctata cttccattgc
    12181 tttcaaagtg tatttcaaat ttatttttta ataacatttg gataaatttt ataaattcag
    12241 gattttcata atggattaat ggctctccac ctgtgataac aactatagga tcaaagtctt
    12301 gttttaattt tatcactctt tttaaaagtt cattagcatt taaagtttca taactttctt
    12361 taaaatcttt tgtgaaaaca gctcttatcg tgtcacatcc aatgagagtt ttatcgtttt
    12421 ttgatatttt tacattaaaa cctaaacagt tgaaattgca accagcaaaa cgcataaaaa
    12481 tagctaattt tccattatat ttgccttctc cttgaatgct taagaaactt tcaacaagtt
    12541 gcaaaattaa cctccagttt gataaaaagc acgagatgag gtttcattat caacaacact
    12601 ccatttattt ttttctggtt tatttcttaa tacttcttgt aatatttcta cagcggcttt
    12661 aatatcacct tttcgaaccg cttcttttat gcttaatgct tcatcaaaat aaaggcaagg
    12721 tattaacaag ccttcagcac ttaagcgtat gcgattgcaa gaatcgcaaa attcatggct
    12781 atgaggatct ataattccaa attcataatc atctgccttg taaatactca caggtgcttt
    12841 ttcatctttt tttataagtt gaatttgata tttttgactc aaaatttgta taatttcatc
    12901 tctttttaat ccttgtaatt taccataagc atgagtattt tccataaatt ctataaagcg
    12961 aatttgagct ttttttgatt ttgcaaattc caaaagagat atcagttcat catcgtttaa
    13021 atttttaaga gctacagtat taagttttac tttcaaatct agatttaaag cttcatcaat
    13081 tccagataaa acactatcta atacatcttt ttgcgcaaga gtttttgctt ttttgtgatc
    13141 tagggtatca agtgaaatat taagtcgttt aagtccagca ttttttaggt ctttagcaaa
    13201 gtcttttagt aaaaatccat ttgtagttat agcaaggtca atatcgcttt tataatcgct
    13261 aatcattttt ataaaaatac ttaaatcttt tcttaataaa ggttctccac ctgttatacg
    13321 gattttttca attccttcgt ctatagctgc tttaacaaat aaaaaaagtt cttcgaagct
    13381 taataaattt tcttttggct gataatcgaa aggaattttt ggcatacaat aaaggcagcg
    13441 aaagttacat ctttgtgtaa ctgaaattct aagataattt atctttctac cgaattgatc
    13501 tataagcatt tattttccat tctattttat taatttctta aattttaaga caagttctac
    13561 atttccagtg ccaatgcgta aatctttagc gatttgttct atgctttttc cttctttgaa
    13621 aagattttct attttttgtt cttctgtatc gtaatttggc gtaagtttag ccatgctttg
    13681 tgctttttgt tctaaattta aaagacgatt ttgttgttca ttttgaaaat cttctatgat
    13741 atgttccata gtttttagtg ttcttaaaac aggagtgatt tttgaactga tttgtttatc
    13801 aagttcaatc ataatttctt cttttaaaag agaggtttta tagtcttcat cctcttcgct
    13861 atcatcttta actcctaatt ctttacgaaa ataatgaagt tctttggtaa tatcttctat
    13921 cacattttga agttttgcta tttttgcatt attttctctt tctttgatat tcatgtaggc
    13981 tagcattgaa attaaaagca caattataaa aactaaataa agtacatcat cactcattct
    14041 tggcctttct tatttcttat catatttctt tggatttcaa caacaaaagc atcaaaagcc
    14101 attttgtctt caggcttaat tttgataatt tttgccaatg tttgactttg agctttgata
    14161 aaaatagcta ttttttgatt atttaaatca aatcttaaat aatattcttt atcttcttct
    14221 aaaatagtat ccaaaaaatt tagatactca aaatttaaag attctattac ccctttttgc
    14281 ttaagtggta taagttcttt atttttatct aaagaattct caagccttaa aatatcttct
    14341 tttagactta aaagaagatc aaaaataatt ttttcaccct cgtcaaaatc aatgcgtaaa
    14401 gcaagttttt tccattttaa aatttgagaa attgctccaa gttttaggta ttctccaaga
    14461 aaacggttat tttctatttc acaacattct aaatgagctt caaatcctgc tttaaaaagt
    14521 gctaattcca taataaatca atccaaataa aaataaaaaa gataatactt aaataaccat
    14581 ttagagtaaa aaatgctcta tcaatatgag caaaattctt gtgaacaatt ttatgttcca
    14641 aggctaaaat aataccgctt ataattaccc caataagtgc tatttttcca agtgctacac
    14701 cccaaacttc ccacacaaaa agaagccaaa ataataccgc taaaatatgg caaaaagctg
    14761 atataaataa agtagccttt gaaccaaatt tagcaggaat agagtgaagt cctatttttt
    14821 tatcatactc catatcttgt aaagaataaa gcagatcaaa cccagctgtc caaaaagtta
    14881 cacctaaaca taaaataacg ctataaatgt gaatttcacc cataattata acacttcctg
    14941 caataggcgc aagtcctaaa caaaatccta aaactaaatg tgctaaagaa ctaaagcgct
    15001 taaaagctga ataaatagcc aataccaaaa gcacaggaaa agacaaataa aaggccaagg
    15061 tattaataaa ataagaacat gatataaaaa taagtgcatt aataatgata aaaatccata
    15121 cgctttttct acctattttt ccactgacat tagggcgatt tgcacaacga ggattatcct
    15181 tatctatatc ttcatccatt aaacgatttg tagccatggc aaaatttctt gcacttaccg
    15241 cacaaataat gcctaaaatc aacgccttaa aaccaaacca agcagtgtca tttgcaagtt
    15301 ttgatgctac aatcatagag gaaaataaaa aaggcaaagc aaaaatagaa tgcttaaata
    15361 ctacaagttc taaaatatct ttaaatttta tccagaatgt gttcattttt ctactttaaa
    15421 atattttttg ctatgatttt actaaaattt ttataaattt taggataaat attaaaatgt
    15481 tttttgaaat agcattaata ggaacaaccg cgagtggaaa aacatacata gccaatactt
    15541 tagcaagaga atttaatgct gttgttttaa gtcttgatag tctttgtgtt tataaagaga
    15601 ttaatatagc aagtgccaag ccttcacaag atgatcttgc gagtataaaa tactttgggg
    15661 taaatttatt gagcgtgaat gaacatttta atgttgagtt attcataaga gaatatcaaa
    15721 aagcaaaaga atttgcttta gctagaaatt tacctctaat tatagtaggt ggaactggat
    15781 tttatttaaa aactatgata gatggtttaa gtgaaaaaac cttagagtca aagagttctt
    15841 taaataacga tgaaatttat gctcttttat taaatattga tccaaactat aaaatagaaa
    15901 aaaatgatac ttatagatta aaaaaatggc tgggtattta tgaacaaaca agagaaattc
    15961 ctagtgaatt tttaaaaaga acacaaaaaa ctggggtgct taaagatata gaaatttatg
    16021 agcttgcgtg ggataaagaa attttaaaaa aacgtattaa aactagaaca aaagaaatgc
    16081 ttgataatgg acttttagat gaagcaaaaa ttcttttttc taaatttgat cataaactta
    16141 aagcattaaa ttctataggt ttgaaagagt gtaaagaata tttagatgga gaaatttcct
    16201 ttaaagagct tgaaaattta atcacgatac atactacaca acttgccaaa agacaaagaa
    16261 cttttaataa aaaatttcaa agtaaagcct tggaatttga taaagcttta gctactttaa
    16321 gaatgaaatt ttcaatcgaa aaataaatgt tctattagaa tttttactcc tagtataatt
    16381 aaaaccaatc cacctaaaag ttcagcttta tttttaagat aaattccaaa tttattccct
    16441 gtttttagag caatgataca taaaatgaag gtgataatac ctattaaaaa tatagctaat
    16501 aataaattta catttaaaaa tgcaaaactc acaccaactg ctagtgcatc gatactcgta
    16561 gcaattgcta aagctagcat ggttttaaag ccaaattgat tggcattact atcgcaattt
    16621 tcattttcca atgactcttt gatcattttt aatcctatta aagaaagtaa aataaaagct
    16681 atccaatgat caatactcgc aataaaagat gcaaaagtta tgcctataaa ataaccaata
    16741 gttggcatca aagcttgaaa tccaccaaaa taaattccaa caataagata atgttttaaa
    16801 tgtagttttt taacactaaa acctttgcat agtgatacag caaaagcatc cattcctaaa
    16861 gcacaggata aaaaaataag actataaaaa tccataataa atcctaaaat tttataaaaa
    16921 attgaagatg aaattataat caaacaaaga taaa
//
LOCUS       DAPIWB010000038        16938 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.039, whole genome shotgun sequence.
ACCESSION   DAPIWB010000038 DAPIWB010000000
VERSION     DAPIWB010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16938)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16938)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16938
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.039"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            33..329
                     /locus_tag="RJ266_001039"
     CDS             33..329
                     /locus_tag="RJ266_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002871941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HDV7354792.1"
                     /translation="MLLDKLIPTWNEKYSIHDTMIDIQHQKLCELASKVESAVYKFVK
                     REELKEILTELFNYMKEHFSNEEDYMQEIHYPYLNEHKIMHKISFVICLILYKT"
     gene            305..655
                     /locus_tag="RJ266_001040"
     CDS             305..655
                     /locus_tag="RJ266_001040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354793.1"
                     /translation="MSYLIQNIKTTNDLKEKLYTVSKKWLLEHILYKDVKVEQYRRSS
                     LTSEDDGEVSFEEVKEEKDDENTVYLYTCECVEQMHDVPFGIHQKIQLKGVKFKCKKC
                     KEAIQFYKKYSENF"
     gene            complement(896..1927)
                     /locus_tag="RJ266_001041"
     CDS             complement(896..1927)
                     /locus_tag="RJ266_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj0069 family protein"
                     /protein_id="HDV7354794.1"
                     /translation="MKKNIVFFEVKGGSDKGEDGYRKDTMPMVNALKAKGWNAEVIFF
                     EVGKKDEIYKYVKENFDGYVSRINPGNLKEENEYFDMLRKLCADKLVGMPHPDAMIGY
                     GAKDALTKLADTDLVPSDTYAYYDIKTFKENFPKSLAKGERVLKQNRGSTGEGIWRVS
                     VEGNVSGDSLPLNTKIKCTEAKDNHVEHRELGEFIDFCEQYIIGDNGMLVDMTFLPRI
                     KEGEIRLLMLYNTPVNVVHKKPAEDADAFSATLFSGAKYRYDKPEDWKTLVDMFLGEL
                     PKVREKLGNYDLPLIWTADFILDTDEKGNDKYVLGEINCSCVGFTSHLELADEVALNI
                     INIVSKTKA"
     gene            complement(2006..2902)
                     /gene="sppA"
                     /locus_tag="RJ266_001042"
     CDS             complement(2006..2902)
                     /gene="sppA"
                     /locus_tag="RJ266_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HDV7354795.1"
                     /translation="MQILKSFFKALGCGIKFINTYFKAFVLLLIVIWILMPSANSSSN
                     LANLERIDLKGEIFDSSAVLEKIINAKNDSNIKGVLFVIDSPGGAFAPSMELALAIKD
                     LKIKKPVLVYASGTMASGSYLAGVGANKILANPASFIGSIGVIMQGADLSGLANKLGI
                     KEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQSYDLFTGFVAKERALDLNKKDQWA
                     NARVFLAAKAKELGLIDELSNYENAKKELEKLANVSNPVWKEEDKIDKFLNRLEGQTS
                     SLISKSLIEIAYKTNSSFINAR"
     gene            complement(2890..4119)
                     /locus_tag="RJ266_001043"
     CDS             complement(2890..4119)
                     /locus_tag="RJ266_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDV7354796.1"
                     /translation="MFIVTARYLFLCDEDFTILENQAFVFEDKILELGELDNLRKKYP
                     KAKIIKTPKNSVILPAFINPHTHLEFSANSTTLHFGEFLIWLKSVINSRSMLNAQAKE
                     ELILQSIKKMQKSGIGTIGEISSFGSDLDPCLKASHKGMRIVFFNEILGTNENQVEDK
                     KQEFLKRFENSLKFKNDFFIPAISIHSPYSTHPSLAHFALDLAKKQNLLVSTHFLESK
                     AENIWLRESKGSFKKWLENFTLHPKPLYTPKDFAKLFKGVRTLFTHCVYLKEYEWLDK
                     NLHSITHCAFSNRLLSQKSLDLKTALKSGLNIHLGTDGLSSNISLSLLDEMRANLLIH
                     KNFDLLELASKLLQMVTLYPARALNLNLGELKKGKIADFSVFELGECDKKQAPLQFIL
                     NAKEVDKLFIKGKECKF"
     gene            4210..4689
                     /gene="aroQ"
                     /locus_tag="RJ266_001044"
     CDS             4210..4689
                     /gene="aroQ"
                     /locus_tag="RJ266_001044"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HDV7354797.1"
                     /translation="MKIMIIQGPNVNMLGVREVGIYGAMKMEEIHEQMKLAASQNNVE
                     LDFFQSNFEGEIVDKIQECLGTVDGIIINAAGYTHTSVAIRDAIAAVALPTIEVHISN
                     VYRREEFRQKSLIAPVCSGTIVGFGPFGYHLALMGIIQICEQIKNLRAMQQAQQTNK"
     gene            4692..5165
                     /gene="folK"
                     /locus_tag="RJ266_001045"
     CDS             4692..5165
                     /gene="folK"
                     /locus_tag="RJ266_001045"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HDV7354798.1"
                     /translation="MLKIQGVKHFEKSRFFPFFSQNIRSFKYLALIGLGSNIEPEKKR
                     FDMLFRVMMDDKRFKILSTSPMLINEAFGFKEQKDFTNAVMLIQTNLHARALLKVLLY
                     YEVKFKRKRTFKNAPRTLDLDLLYFSQKVKCDKWCEVPHKGAKERVSVILPLGMI"
     gene            5175..6629
                     /gene="flhF"
                     /locus_tag="RJ266_001046"
     CDS             5175..6629
                     /gene="flhF"
                     /locus_tag="RJ266_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhF"
                     /protein_id="HDV7354799.1"
                     /translation="MGQLIHTFTVEDTEQIIPKVKEDYGDKALIITNKQIRPKTLNRS
                     ALYEVMVAIEESDYEEHLKKQGKSLPAKKSSPKPSSTSLAEEKIRSQIPQEDEDVVLD
                     FSNTRLNTNLNTVKNNDLAKKTYQDFPQNKINPHQNKTLGFDDFKEKLSEVSNEISKV
                     TNTPLENYTPNPNYNKKIENFEKQFEKQINKLNDKIDLLTDMMWDDKAEARKNLMIPP
                     EFASIYKQAKESGMLENHLEAIMKATIENMPAAMKTNKDAVQRYFHSLLRNILPCRVE
                     SDIKKQKIMMLVGPTGVGKTTTLAKLAFRYAYGDKRYKTGIITLDTYRIGAVEQLFQY
                     AKMMKLPIIDSIEPKDLDEAIKSLNNCEVILVDTIGNSQYDQSKLAKTKEFLMHSNAE
                     IDVNLVVSANTKHEDLMEIYKNFSFLNIDTLIITKFDETKVFGNIFSLVYETNIPLSF
                     FSIGQEVPDDLEVANSDFLVHCILEGFNKGKNNE"
     gene            6622..7488
                     /gene="flhG"
                     /locus_tag="RJ266_001047"
     CDS             6622..7488
                     /gene="flhG"
                     /locus_tag="RJ266_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis ATPase FlhG"
                     /protein_id="HDV7354800.1"
                     /translation="MNNQANKLRNLMSQNGTKKSQNTHFIAITSGKGGVGKSTISANL
                     ANVLANNGYKVGLFDADIGLANLDVILNVRIQKNLLHVLRGECSLEDILIEVKPNLWL
                     IPGESGDEILKYNDKNIYERFLNQASILDELDFLIIDTGAGIGGNILNFLEMADEVIV
                     VTVPDPAAITDAYATIKTTSKTKENLLMLFNVVKNENEALKVFENIKKVADANIKNPL
                     NLEFLGHLSASKDVSGSIKKRTLFSDENTASSDEIKALASKLLYRLERKVLDNVSNRS
                     FSSFFRKIIERF"
     gene            7507..7863
                     /locus_tag="RJ266_001048"
     CDS             7507..7863
                     /locus_tag="RJ266_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354801.1"
                     /translation="MRPENYVAFFTVCGFFIGLAFSIISIDEAFDILIFTCFITFMFY
                     VFVHIAIMNFIDVKKISGRIFNKHDYEKTSNNIINDLVIREKKMDIILEKLNEEREEL
                     KKNEFKERRRNAKRAA"
     gene            7844..8536
                     /locus_tag="RJ266_001049"
     CDS             7844..8536
                     /locus_tag="RJ266_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor FliA"
                     /protein_id="HDV7354802.1"
                     /translation="MLKEPPKAYAQMLKKEQDELVLSYMPALRAMAFRLKERLPSSID
                     VNDLISIGVEEMIKLSRRYDKEQNDNFWGFARKRVNGSMLDYLRSLDVMSRNNRKIIK
                     DIDAIMDEYFLEHECEPDDEYLAKKLNLDVEKIKEVRTAHAISYTLPIDEQIELYNED
                     NTLEKIEKEELLEKIHEVLDDLKERDQLIIQLYYYEELSLKEISEILQISESRISQIH
                     KKLLKKLRERLV"
     gene            8536..9615
                     /gene="fliM"
                     /locus_tag="RJ266_001050"
     CDS             8536..9615
                     /gene="fliM"
                     /locus_tag="RJ266_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HDV7354803.1"
                     /translation="MAEILSQEEIDALLEVVDDNTDTPIASNSKDEKDERNIVVYDFK
                     RPNRVSKEQLRTIKGIHDKLARNLASQISSMMRSIVETKLHSVDQMTYGEFLMSLPSP
                     TSFNVFSIKPLDGNCVLEINPSIAFPMIDRLLGGQGDSYEASRELTDIELNLLDSILR
                     IIMQRLKESWATVTEIYPSIEAKESSPNVVQIVSQNEIVIMVVMEIIIGNSSGMVNIC
                     YPVVHLESILSRLANRDIMMGETSAKKSRNKELKTLIGRAEVVYEAILGKTLINVHEF
                     LELKQGDILRLDREADDKAIVSIDKKDVFLAQIGLHRFRKSIKILELIRTDKDEIKEI
                     LEKYEEERKAKASVYDEPEEEDEEI"
     gene            9612..10454
                     /gene="fliY"
                     /locus_tag="RJ266_001051"
     CDS             9612..10454
                     /gene="fliY"
                     /locus_tag="RJ266_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliY"
                     /protein_id="HDV7354804.1"
                     /translation="MINDFLKMFTNECISTIEGLTGKSAEFSEYKEFDVNASDTLKAP
                     LVYAIFDIANGGKIGILAGAVLMSAIGEWMMGEEEITKNDKLGPDEMDAAKEAIQNII
                     SAFSTTLGAQKDIPKMDFSIESCEFVPESVDFKDFKKLFLYDVKIGDLEEQVSLAMDQ
                     TLHNILSGKPAETGNTSTDSNHNTEEKAIMLSEELKNINLIMDVRLPVRVRIGNKKML
                     LKDVLTMDIGSVVELNQLANDPLEILIGDKRIAYGEVVIVDGNFGVQITEIGSKKERL
                     EQLR"
     gene            complement(10503..11104)
                     /locus_tag="RJ266_001052"
                     /pseudo
     CDS             complement(10503..11104)
                     /locus_tag="RJ266_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343522.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
     gene            complement(11089..11265)
                     /locus_tag="RJ266_001053"
     CDS             complement(11089..11265)
                     /locus_tag="RJ266_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005021772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-structuring protein H-NS"
                     /protein_id="HDV7354805.1"
                     /translation="MKQKINGYQNSEVRSIPTLSLGSTYSINSDTAVSVNASFGGSSA
                     SPDSIFGISLWKKF"
     gene            complement(11414..11731)
                     /locus_tag="RJ266_001054"
     CDS             complement(11414..11731)
                     /locus_tag="RJ266_001054"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354806.1"
                     /translation="MFLTQTFIYTITPKFDILISGGGSYARAEYTNFFTNEYSSKNRI
                     GFDSLWLGFIYTGDSIADLIPQITFQTAVVQREKAINQTKNFYLKSQSLQASLRGYSD
                     CSL"
     gene            complement(11732..11941)
                     /locus_tag="RJ266_001055"
     CDS             complement(11732..11941)
                     /locus_tag="RJ266_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002888957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354807.1"
                     /translation="MKKNFLAFMVLVNCVFASDELNIDSLFKKQIGLRSITSVSLLST
                     GNANSYSLYPNITIGGDPTIWNDTK"
     gene            12222..12818
                     /locus_tag="RJ266_001056"
     CDS             12222..12818
                     /locus_tag="RJ266_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354808.1"
                     /translation="MKRFSMKKIFALLALTSLLTSSVFAEDFLAKLTKGALSDTSPGV
                     KELSLEEMKQVKGGYVVEFEFFKDRRNLTSEVYAIAEITLEERKNLDKGLCGAGEDKC
                     QNPSRDRLFAWLQASANSPADYRPVYKVKRQIKHSNLGQPYVLFTYGVAVYNVNNGQI
                     YQYNSSPMLNNNRIIREIAHQYKSVIEDAMGGWNPRLF"
     gene            12839..13615
                     /locus_tag="RJ266_001057"
     CDS             12839..13615
                     /locus_tag="RJ266_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354809.1"
                     /translation="MISLNSHYPNINYPNNALSIKKDENNEYAYAKKDEPKSEEDAYW
                     EDFVQKYFGEMLSEEYANKYGYNGDPDVKEVENSLLERMRKDKLTEEEWEILNGAYDI
                     DNIEFIPRDKIARIREANLLKTLTSASEFARIWVAEKDERKKRFIDALDVKPLTQEEI
                     DRFLNKQQSSNSTQESNENGQNPDEKPFKAIQGESKNKETYKDNNISSEFLKKLLENS
                     FNKAKELELLFGMKFSDDDAGEFNKILSLNSTPKSIDIKA"
     gene            13737..14342
                     /locus_tag="RJ266_001058"
     CDS             13737..14342
                     /locus_tag="RJ266_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HDV7354810.1"
                     /translation="MNEKISQDLEKFANIPNLKNAVTFFGSARLKEDNFYYQQAKILA
                     QKCVQNGFCVISGGGGGIMRAANEGAFSQKNNTNSMSSVGFNIFLPHEQKLNDFVEYN
                     ITFESLAIRKMALIEKSLAFVIFPGGFGTLDELCEILTLKQLEFKKDVPIILFGSEFW
                     RGFDEFVRNSLLKLEVISKGDELKYKITDDLDFIINTLKEI"
     gene            14342..15358
                     /gene="mnmA"
                     /locus_tag="RJ266_001059"
     CDS             14342..15358
                     /gene="mnmA"
                     /locus_tag="RJ266_001059"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HDV7354811.1"
                     /translation="MKILVAMSGGVDSTVTAYKLKNLGHEVIGCYMKLHGKPNYHEEN
                     IKKVEKVANFLQIPYHILDLQEDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLL
                     EFAKSLGCEKLATGHYARLENNLIKTAVDESKDQSYFLASADKEALKYLIFPLGEMKK
                     EDVKKFASTIEVLKSFATQKESSEICFVEDTYVQVLDQFMDTKIPGEVLDSSGKVVGK
                     HEGYMHYTIGKRRGFEVRGAHEPHFVLKINPKQNQIIVGTKEELKISEFNLKNINLFI
                     DAKELDCEVKIRYRSKSTPCKVEIYEDKSAKIILKDPVYGLASGQMAVFYDHDKVIAS
                     GFIE"
     gene            complement(15410..15631)
                     /locus_tag="RJ266_001060"
     CDS             complement(15410..15631)
                     /locus_tag="RJ266_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDV7354812.1"
                     /translation="MFFIVQLALGAPPLFYAFIMITSGNVMMALTHYAIGTAPVIFGT
                     GCVTLKKWWSTGFVISIVDIVVMIAVGLV"
     gene            complement(15753..15992)
                     /locus_tag="RJ266_001061"
     CDS             complement(15753..15992)
                     /locus_tag="RJ266_001061"
                     /inference="COORDINATES: protein motif:HMM:NF013132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDV7354813.1"
                     /translation="MSRFYFYGLELWACFFGISLDATSVALLGLSLVLISGVLTFGEV
                     LAEKAAWNTLVWFSALVMMATLLGKLGVTQFLAEA"
     gene            complement(15931..16146)
                     /locus_tag="RJ266_001062"
     CDS             complement(15931..16146)
                     /locus_tag="RJ266_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002869943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDV7354814.1"
                     /translation="MFITATAPNPLVLYFLSPLEIKSTPNASTFAKDKLKELVKMKNS
                     EKIMLSVFVSLLLLWAGALGLFFWNFS"
     gene            complement(16089..16433)
                     /locus_tag="RJ266_001063"
     CDS             complement(16089..16433)
                     /locus_tag="RJ266_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDV7354815.1"
                     /translation="MARGVIKTGLGEHLAYHFISILGKKTLGIAYSIAFCETILAPVT
                     PSNTARAGAIINPIVQVIARSFKSTPEDGTQNKIGTYLSLVNYQEPILFHQLCLLQLQ
                     LQILWCFIFSLR"
     gene            complement(16656..16805)
                     /locus_tag="RJ266_001064"
     CDS             complement(16656..16805)
                     /locus_tag="RJ266_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDV7354816.1"
                     /translation="MEDNSWHFLGLFIAVIMAVILQVMPLGAVCMIAIAIVALSGITT
                     TQLKI"
BASE COUNT         6339 a         2576 c         2683 g         5340 t
ORIGIN      
        1 taaattaatt ttaaatacaa aaattaaaga aggtgctttt agataaacta attccaactt
       61 ggaatgaaaa atacagtatt catgacacaa tgattgacat tcaacaccaa aaactttgtg
      121 aacttgcaag caaggttgaa agtgctgttt ataaatttgt aaaacgagaa gaactcaaag
      181 aaattttaac agaacttttt aactatatga aagaacattt tagtaatgaa gaagattata
      241 tgcaagaaat tcattatcct tatttaaatg aacacaaaat catgcataaa atatcattcg
      301 tgatatgtct tatcttatac aaaacataaa aaccactaat gatttaaaag agaagcttta
      361 cacagtttct aaaaaatggc ttttagaaca tatactctat aaagatgtga aagttgaaca
      421 atacagaaga tcttctttaa cttctgaaga tgatggggaa gtaagctttg aagaagtcaa
      481 agaagaaaaa gatgatgaaa atacagttta tctttataca tgcgaatgcg tagaacaaat
      541 gcatgatgta ccatttggaa ttcatcaaaa aattcaactt aagggcgtaa aatttaaatg
      601 taaaaaatgc aaagaagcca tacagtttta taaaaaatat tcagaaaatt tctaattaac
      661 tatttatgcg ttaaaataat aaataaagta taagttagac aaagaaggaa atttaaggat
      721 aaaaaataaa atattttatt ttggataaat ttgactattc ctatcctatg ctaaccaaag
      781 atacaaaatg ctcattttgt gaaaattttt tctcgataga atatagctca aacttaaaaa
      841 caatagaaaa agaatgtcca ttttgcaata ataaaatgga cattaagctt aaagactaag
      901 ccttagtttt acttacaata ttaataatat ttaaagctac ttcatcagca agttctaaat
      961 gagaagtaaa acctacacaa gaacaattaa tctcgcctaa aacatattta tcattgccct
     1021 tttcatcagt atctaaaata aaatcagccg tccaaatcaa tggtaagtcg taattgccta
     1081 atttttccct taccttagga agctcgccta aaaacatatc caccaaagtt ttccaatctt
     1141 ctggcttatc atagcgatat tttgccccac taaaaagcgt agcagaaaaa gcatcagcat
     1201 cttcggctgg ttttttatgc actacattta caggggtgtt ataaagcatt aaaagtctga
     1261 tttcaccttc tttaatgcgc ggtaaaaaag tcatatccac aagcatacca ttatcaccta
     1321 tgatatattg ctcgcaaaaa tctataaatt ccccaagctc tctatgttct acatgattat
     1381 ccttagcttc tgtacatttg atttttgtgt ttaaaggcaa actatctcca ctaacattac
     1441 cctctacact cacacgccaa attccctctc ctgtagagcc acgattttgt tttaaaaccc
     1501 tttcaccttt agccaaactt tttggaaaat tttctttaaa agtcttaata tcatagtaag
     1561 cataagtatc gcttggaaca agatcagtat ctgctaattt tgtaagtgca tctttagcgc
     1621 cataacctat catagcatca ggatgaggca tgcctacaag cttatcggca caaagttttc
     1681 ttaacatatc aaaatactca ttttcttctt taagattgcc aggattgatg cgagaaacat
     1741 aaccatcaaa attttctttc acatatttgt aaatttcatc ttttttaccc acttcaaaaa
     1801 aaatcacctc agcattccaa cccttagctt ttaaggcatt taccataggc atggtatctt
     1861 ttctatagcc atcttcacct ttatcactcc cacctttaac ttcgaaaaaa acaatatttt
     1921 ttttcattat tttactcctt atctaagata taaataatta ttgcataaaa atattacaaa
     1981 aattaaataa aaatatttat atattttatc tagcgtttat aaaactgcta ttagttttat
     2041 aagcgatttc gattaagctt ttacttatca agcttgatgt ttgtccttct aggcggttaa
     2101 gaaatttatc aatcttatct tcttctttcc aaacaggatt tgaaacatta gcaagttttt
     2161 caagctcctt tttagcattt tcataattac taagctcatc tataagacca agctccttag
     2221 ccttggcagc taaaaacact cttgcatttg cccattgatc ttttttatta agatctaatg
     2281 ctctttcctt ggcaacaaaa cctgtaaaaa gatcataact ttgatcaatt aaaccctgta
     2341 aaaaatttct ttcattctca ttccaagctc ttgcaaaagt tccagcactt ttaaattcac
     2401 ccgcttgaat agtttgttct ttaataccga gtttattagc caatccgctt aaatcagctc
     2461 cttgcataat cacaccgata gagcctataa aacttgctgg attggctaaa attttattag
     2521 ctccaactcc tgctaaataa cttccacttg ccatagttcc gcttgcataa acaagcacag
     2581 gctttttaat ttttaaatcc tttatagcta gagctagttc catactagga gcaaaagctc
     2641 caccaggaga gtctataaca aaaagcactc ctttaatatt gctatcattt ttagcattga
     2701 taattttttc caaaaccgca gagctgtcaa aaatttcacc ctttaaatca atgcgttcta
     2761 aatttgcaag attggagctt gaatttgcac taggcattaa aatccatata acaatcaaca
     2821 ataaaacaaa ggctttaaaa taagtattga taaattttat accgcatcct aaagccttaa
     2881 aaaatgattt taaaatttgc attcttttcc ttttataaat aatttatcca cttccttagc
     2941 atttaaaata aactgcaaag gagcttgctt tttatcacat tctcctagct caaatacgct
     3001 aaaatcagca attttacctt ttttaagctc tcctaaattt aaatttaaag cccttgcagg
     3061 ataaagtgtt accatttgca aaagcttaga ggctaactcc aataaatcaa aattcttatg
     3121 tataagcaaa ttcgcgcgca tttcatcaag taaggacaat gaaatatttg agctaagtcc
     3181 atcggttcct aaatggatat ttaatccact ttttaaagcc gtttttaaat ctaagctttt
     3241 ttgacttaaa aggcgatttg aaaatgcaca atgtgtaata gaatgtaaat ttttatctaa
     3301 ccattcatat tcttttaaat aaacacaatg cgtaaaaaga gtccttactc ctttaaagag
     3361 tttagcaaaa tcctttggtg tataaagagg cttaggatga agtgtgaaat tttcaagcca
     3421 ttttttaaaa ctccctttag actctctaag ccagatattt tcagccttac tttctaaaaa
     3481 atgcgtacta actagtaaat tttgcttttt agctaaatca agagcaaaat gagccaaact
     3541 aggatgagtt gaataaggag aatgaatcga aattgctggg ataaaaaaat catttttaaa
     3601 tttcaaagaa ttttcaaatc tttttaagaa ttcttgtttt ttatcttcaa cttgattttc
     3661 atttgtaccc aaaatttcat taaaaaatac tatacgcata cccttgtgac tagcctttaa
     3721 gcaaggatct aaatcactcc caaaacttga aatttcacct atagtgccta taccgctttt
     3781 ttgcattttt ttaatacttt gaagtattaa ttcttctttg gcctgtgcat ttaacatgga
     3841 acgagaattt ataacacttt taagccaaat taaaaattct ccaaaatgta aagttgttga
     3901 atttgcacta aattctaagt gtgtgtgagg atttataaaa gcaggtaaaa taaccgaatt
     3961 tttaggtgtt ttgatgattt tagccttggg atattttttt cttaaattat ccaattcacc
     4021 caattctaaa attttatctt caaaaacaaa ggcttgattt tctagtatcg taaaatcttc
     4081 atcgcataaa aaaagatatc ttgcagtaac tataaacacg attttccttt caaaaattac
     4141 attgtagcaa aaatttattt ttaaaatgtt ataataaaag gttaaaaata aatttttaag
     4201 gttaaatcca tgaaaataat gattatccaa ggcccaaatg ttaatatgct tggcgtaaga
     4261 gaagtgggaa tttatggtgc tatgaaaatg gaagaaattc atgagcaaat gaaacttgca
     4321 gcatctcaaa acaatgtaga acttgacttt ttccaaagta attttgaagg tgaaatcgta
     4381 gataaaattc aagaatgtct tggaacagtt gatggaatta ttatcaacgc agcaggctat
     4441 actcatactt cagtagctat tcgcgatgct attgcagcag tagctttgcc tacaattgaa
     4501 gtacatatta gcaatgttta tcgcagagaa gaatttcgtc aaaaaagtct tatagcgcct
     4561 gtatgttctg gaactattgt tggttttggt ccttttggct atcacttggc tttaatgggt
     4621 ataattcaaa tttgcgaaca aataaaaaat ttgcgtgcga tgcaacaagc acaacaaacg
     4681 aataaataat aatgctaaaa attcaaggag taaaacactt tgaaaaaagt cgtttttttc
     4741 ctttttttag tcaaaatata cgatctttta aatatttagc tcttataggc ttaggaagca
     4801 atatagagcc cgaaaaaaaa agatttgata tgctttttcg agtaatgatg gatgataaaa
     4861 gatttaaaat tttatccaca tctcctatgt tgataaatga agcctttggt tttaaagagc
     4921 aaaaagattt taccaatgct gttatgttga tacaaactaa tttgcatgca cgagcacttt
     4981 tgaaagtttt actttactat gaagtaaaat ttaaacgcaa gagaactttc aaaaacgctc
     5041 ctagaacgct tgatttagat cttttatact tttcacaaaa agtcaagtgt gataagtggt
     5101 gtgaggtacc tcataaaggg gctaaagaaa gagtgagtgt aattttgcct ttaggcatga
     5161 tataaggaat ataaatggga caacttatac atacttttac tgttgaagat acagaacaaa
     5221 ttatacccaa agtaaaagaa gattacggag ataaagcttt aattataaca aataaacaaa
     5281 ttcgtcctaa aaccttaaat cgcagtgcgc tttatgaggt tatggtagcc atagaagaaa
     5341 gcgactatga agaacactta aaaaaacaag gaaaatcttt acctgcaaaa aaaagctcgc
     5401 caaaaccatc ttctacctct cttgcagaag aaaaaattag atctcaaatc cctcaagaag
     5461 atgaagatgt agtcttggat ttctcaaaca ctcgcttaaa tacaaattta aacactgtaa
     5521 aaaacaatga cttagctaaa aaaacctatc aagattttcc acaaaacaaa atcaaccctc
     5581 atcaaaataa gactctaggc tttgatgatt tcaaagaaaa actaagtgaa gttagcaatg
     5641 aaatttctaa agtcacaaac acacctttag aaaattacac ccctaatcca aattataata
     5701 aaaaaataga aaattttgaa aagcaatttg aaaaacaaat caacaagctt aatgataaaa
     5761 tagatcttct tacagatatg atgtgggacg ataaagctga agctagaaaa aatcttatga
     5821 tacctcctga atttgcaagt atttataaac aagccaaaga aagtggaatg cttgaaaatc
     5881 atctagaagc gattatgaaa gcaactatag aaaatatgcc agctgctatg aaaaccaaca
     5941 aagatgcggt tcaaagatat tttcactcac ttttaagaaa tatcttgcct tgtcgtgttg
     6001 aaagcgatat aaaaaaacaa aaaatcatga tgctagtagg cccaacagga gtcggaaaaa
     6061 caacaacctt agctaagtta gcttttcgct atgcttatgg agataagcgt tataaaacag
     6121 gtattattac gcttgatact tatagaatcg gtgcagttga gcaacttttt cagtatgcaa
     6181 aaatgatgaa acttcctatt attgatagca tagaaccaaa ggatttagat gaagcgataa
     6241 aaagcttaaa taattgcgaa gtaattttag ttgatactat aggaaattca caatacgatc
     6301 aaagcaaact tgctaaaact aaagaatttt taatgcactc aaatgcagaa attgatgtaa
     6361 atttagtggt ttctgcaaac accaaacatg aagatttaat ggaaatttat aaaaattttt
     6421 cattcttaaa tattgatact ttgattatta ctaaatttga tgaaacaaag gtttttggaa
     6481 atatcttctc tcttgtttat gaaacaaata ttcctctaag ctttttctct ataggacaag
     6541 aagtgccaga tgatttagaa gtagccaata gtgattttct agttcattgt attttagaag
     6601 ggtttaacaa aggaaaaaat aatgaataac caagcaaata aacttcgcaa tctcatgagt
     6661 caaaatggaa ccaaaaaatc ccaaaacact cattttatag ctattacaag tggaaaaggt
     6721 ggcgttggaa aaagtacgat tagcgcgaat ctagccaatg ttttagcaaa taatggctat
     6781 aaagttgggc tttttgatgc tgatattggc ttggcaaatt tggatgtcat tttaaatgta
     6841 cgcatacaaa aaaatctctt gcatgtttta cgcggagaat gctccttgga agacatttta
     6901 atagaagtta agccaaattt atggctcatc ccaggcgaaa gtggagatga gattttaaaa
     6961 tataatgata aaaatattta cgagagattt ttaaatcaag caagtatttt agatgaactt
     7021 gattttctta ttatcgacac aggcgcgggt attggtggaa atattttaaa ttttttagaa
     7081 atggctgatg aagttatagt agtaactgtt cctgatcctg cagcaatcac tgatgcgtat
     7141 gcaaccataa aaacaacttc taagacaaaa gaaaatttac taatgctctt taatgttgta
     7201 aaaaatgaaa atgaagcttt aaaagttttt gaaaatatta aaaaagttgc agatgcaaac
     7261 attaaaaatc ctttaaattt agaattctta ggtcatttaa gcgcttctaa agatgtaagt
     7321 ggtagtatta aaaaaagaac tttatttagc gatgaaaaca cagcctcaag tgatgagatt
     7381 aaagccctag cttccaagct tttatataga ttggaacgga aagtgcttga taatgtttca
     7441 aatcgtagtt tttcaagttt ttttagaaaa attattgaaa gattttagca ataaagagaa
     7501 gagattatga ggccagaaaa ttacgtagca tttttcactg tttgtggatt ttttatagga
     7561 cttgcattta gcattattag tatagatgaa gcctttgata tactgatttt tacttgtttt
     7621 attactttta tgttttatgt ttttgttcat attgctatta tgaattttat agatgtaaag
     7681 aaaattagtg gcagaatctt taataaacac gattatgaaa aaactagcaa taatattatc
     7741 aacgatttag ttattcgtga aaagaaaatg gatataattt tagaaaagct caatgaagaa
     7801 agagaagagc taaagaaaaa tgaattcaaa gaaagacgaa gaaatgctaa aagagccgcc
     7861 taaagcttat gcacaaatgc taaagaaaga gcaagatgag cttgtgcttt cttacatgcc
     7921 agctctgcgt gctatggctt ttagactaaa agaacgcttg ccttcaagta tagatgttaa
     7981 tgatcttatt agcataggcg ttgaagaaat gataaagctt tcacgccgtt acgataaaga
     8041 acaaaatgat aacttctggg gttttgcaag aaaaagagtt aacggctcta tgcttgatta
     8101 tcttagaagt cttgatgtaa tgagtcgaaa taatcgtaaa attattaaag atattgatgc
     8161 aatcatggat gaatattttt tagaacatga atgcgaacct gatgatgagt atctagccaa
     8221 aaaacttaat ttagatgtag aaaaaatcaa agaagtaaga acagctcatg ctattagcta
     8281 taccctgccc atcgatgagc aaatcgaact ttataatgaa gacaatactt tagaaaaaat
     8341 tgaaaaagaa gaacttttag aaaaaattca cgaagtgcta gatgatctta aagagcgcga
     8401 tcagttaatt attcagcttt attattatga agaattaagc ctaaaagaaa tcagtgaaat
     8461 tttacaaatc agtgaaagca gaatttcaca aattcacaaa aaacttctta aaaaacttag
     8521 agaaaggcta gtgtaatggc tgagatactt tcccaagaag aaattgatgc tctacttgaa
     8581 gttgtcgatg ataacaccga cacacccata gcctcaaatt caaaagatga aaaagatgaa
     8641 agaaatatcg ttgtatatga ttttaagcgt cccaacagag tttcaaaaga acaacttagg
     8701 acaatcaaag gcatacatga taaattagca agaaatttag cctctcaaat ttcatcgatg
     8761 atgagaagta ttgttgaaac taaacttcat tcagtcgatc agatgactta tggagagttt
     8821 ttaatgtctt tgccaagccc aacaagtttt aacgtttttt ctatcaaacc tttagatgga
     8881 aactgtgttt tagaaatcaa tccaagcata gcttttccta tgatagatag acttttgggc
     8941 ggacaaggtg atagctatga agcttcgcgt gagcttacgg atattgagct taatttactt
     9001 gattctattt tgcgtatcat tatgcaaaga cttaaagaaa gctgggctac cgtaactgaa
     9061 atttatccta gtatagaagc taaagaatca agtccaaatg ttgtgcaaat cgtatctcaa
     9121 aatgagattg ttatcatggt agtaatggaa atcatcatag gaaattcaag cggtatggta
     9181 aatatctgct atcctgtagt gcatttagaa agtatattaa gtcgtttggc aaaccgcgac
     9241 attatgatgg gtgaaacctc agccaaaaaa tcacgtaaca aagaacttaa aactttaatc
     9301 ggtcgtgctg aagtggtata tgaggcaatt ttaggaaaaa ccttaattaa tgttcatgaa
     9361 tttttagaac ttaaacaagg cgatatctta agacttgata gagaagcaga tgataaagct
     9421 atagtaagca tcgataaaaa agatgttttc ttagcacaaa ttggattgca tcgttttaga
     9481 aaatctatta aaattttaga actcatacgc acagataaag atgaaatcaa agaaattttg
     9541 gaaaaatacg aagaagaacg taaagctaaa gctagtgttt atgatgagcc tgaagaggag
     9601 gatgaagaaa tatgatcaat gattttttaa aaatgtttac aaatgaatgc atcagcacca
     9661 ttgaaggttt aacaggaaaa agtgctgaat ttagcgaata taaagaattt gatgtcaatg
     9721 caagcgatac tttaaaagca cctttagtgt atgctatatt tgatatagca aatggtggaa
     9781 aaataggaat tttagctggt gctgttttaa tgagtgctat tggtgaatgg atgatgggtg
     9841 aagaagagat caccaaaaac gataaactag gtcctgatga aatggatgca gctaaagaag
     9901 ctatccaaaa tatcatttca gcattttcta caaccttagg agcccaaaaa gacattccaa
     9961 aaatggattt tagcatagaa tcttgtgaat ttgtgcctga aagcgtagat tttaaagatt
    10021 ttaaaaaatt atttttatat gatgtaaaaa taggcgattt agaagaacaa gtttctttag
    10081 ccatggatca aacactccat aacatcctaa gcgggaaacc tgctgaaaca ggaaatacaa
    10141 gcactgattc taatcacaat actgaagaaa aagcgataat gcttagcgaa gagcttaaaa
    10201 atatcaatct tattatggat gtgcgtttgc ctgtgcgtgt gcgtataggc aataaaaaaa
    10261 tgcttttaaa agatgtttta actatggata taggttcagt tgtggagctt aatcaacttg
    10321 caaacgatcc gcttgaaatt ttaattgggg ataaaagaat tgcttatggc gaggtagtaa
    10381 ttgtcgatgg taacttcggc gttcaaatta cagaaatcgg ttctaaaaaa gaaagattag
    10441 aacaactaag ataaaaagtt ttagcctaca aattaagaat aataaatata aatgaattaa
    10501 aactaaaaca aactaaaagg gctgaaatca aaatgtaaag attttggagt gtttaactta
    10561 aaaggtttta gctctttttt aggggcaaca attaaagcat aaccaccttt attatatcta
    10621 tcccaaatgc taaaaaattg acttttagaa cttatatatt ctccatggct tggatcaagc
    10681 acttgtaaat aattaccttt atgattgata attataacaa aatgtggaaa gcgtggatca
    10741 tcttcaattt ttacaagcat tggaatattt acaagtttat ccaagttttc tctattgatt
    10801 tgatatgaat tgctttgaaa gcccagtttt ttaactacat cgcttaaatc tgcaaagctt
    10861 accatatccg tataaagttc ttgtccgctc ataatcttta aaagttcaag ttcatcaaac
    10921 tttttttgat catcaagtat attaagtaaa gttgctaaag atgaagcacc acaagattgc
    10981 tcataagttt gtcttattac tctttcgttt ttaatttctt gataagactt aacttaccca
    11041 ttcggctttt gtactcaaag caagaatggg taaaaaataa taaaattttt agaatttttt
    11101 ccataagctt atcccaaata tgctatcagg agaagcagag cttcctccaa aactagcatt
    11161 aacagaaact gcggtatctg aattaatgct ataagtagaa cctaaactta aagttggaat
    11221 agaacgcact tcagaatttt gatagccatt gattttttgt ttcatttgaa atctttgctc
    11281 tgctcctaaa tctaaagtaa ttttaggact tagaataata gataaatccc cgcccacata
    11341 aatactattt ccatactcta ttttaagggt tttaaatttt cttgattgat tataaccaaa
    11401 tcctgtataa atactataaa ctacagtcac tatatcccct taaactagct tgtaagcttt
    11461 gtgattttag ataaaagttt ttggtttgat tgattgcttt ttctctttga acaactgcag
    11521 tttgaaaggt aatttgtgga attaaatctg caatgctatc gcctgtataa ataaaaccta
    11581 gccataaact atcaaaacct attctgtttt tactagaata ctcatttgta aaaaagtttg
    11641 tatattcagc tcttgcataa cttccgcccc ctgaaataag tatgtcaaac ttaggtgtta
    11701 tggtataaat gaaagtttga gttaaaaaca cttactttgt atcattccaa attgtaggat
    11761 ctccgcctat tgttatatta ggataaagag aatacgagtt tgcatttcct gtgctaagca
    11821 aagaaacgct tgtaatgctt cttaagccta tttgcttttt aaataaacta tctatattta
    11881 attcatcgct agcaaaaaca caattaacta aaaccataaa tgctaagaaa ttttttttca
    11941 ttgtcaatcc ttacatttta aataatcagc tcaagttaat tttaaaattt aatccttgat
    12001 attgaaaagt ttattattct aagataaaat attttaaaat ctttaaatat ttttacttgc
    12061 ttaatataat ttaagataaa aatgaaaatt tgttacaaaa gcaaacaaac cgagaataaa
    12121 attttaagta tttaaagaaa attcacttaa ctttcaaagc aagattaaac ttttgctaga
    12181 ataagtcgat agtagtttta aagaacttac aaaaagaatt tatgaaaaga ttttcaatga
    12241 aaaagatttt tgctttatta gctttaactt ctttactgac tagttctgtt tttgctgagg
    12301 attttttagc taaactcaca aaaggtgcct taagcgatac aagcccgggt gtaaaagaac
    12361 tcagccttga agagatgaaa caagtgaagg gtgggtatgt agttgagttt gaatttttca
    12421 aagacagacg taatttaact tcagaagttt atgctattgc agaaattaca ctagaagaac
    12481 ggaagaatct tgataaaggt ttgtgcggtg caggagaaga taaatgtcaa aatcctagta
    12541 gagacagatt atttgcttgg ttgcaagcca gtgcgaattc ccctgctgat tatcgtcctg
    12601 tatataaggt aaaaagacaa attaaacatt caaatttagg acagccttat gttttattta
    12661 cttatggggt tgctgtttat aatgtaaata atggacaaat ctatcagtat aattcctctc
    12721 ctatgctaaa taacaataga attataagag aaatcgccca tcaatataag agcgtgatag
    12781 aagatgctat gggtggttgg aatccaagat tattttagta ttttaaaaaa ggatttttat
    12841 gataagtctt aattctcact atcctaatat caattatcca aataatgctt taagtattaa
    12901 aaaagatgaa aataacgaat atgcttatgc taaaaaagat gagccaaaaa gtgaagaaga
    12961 tgcttattgg gaagattttg tgcaaaaata ttttggagaa atgcttagtg aagaatatgc
    13021 gaacaaatac ggctataatg gagacccaga tgttaaagaa gttgaaaatt ccttgcttga
    13081 gcgaatgcga aaagataaat taactgaaga ggaatgggaa attcttaacg gagcgtatga
    13141 cattgataat attgaattta ttccaagaga taagattgcc agaatacgcg aagccaatct
    13201 tctaaaaact cttacaagtg cgagtgaatt cgcaagaata tgggttgctg aaaaagatga
    13261 aagaaaaaaa cgatttattg acgcacttga tgttaaacca cttactcaag aagagataga
    13321 taggttttta aataaacaac aaagctcaaa ttctacccaa gaaagcaacg aaaatggtca
    13381 aaacccagat gaaaaaccct tcaaagccat tcaaggcgaa agcaaaaaca aagaaactta
    13441 taaagataat aatataagca gcgaattctt aaaaaagctt ttagaaaata gttttaataa
    13501 ggctaaagaa ttagaacttc tttttggtat gaaatttagt gatgatgatg caggagaatt
    13561 taataaaatc ctttctttaa attctacacc aaaaagtata gatattaaag cttaaggatt
    13621 taaaagtctt ttaaattcct aatcttaata aaataaacct attaaaactt atataataaa
    13681 gaacttatta taaattttta gctagaatgg aatttatttt aactaaaggt tgaaaaatga
    13741 atgaaaaaat aagccaagat ttagaaaaat ttgctaacat accaaaccta aaaaatgccg
    13801 taactttttt tggttcagca agacttaaag aagataattt ttattatcag caggctaaaa
    13861 ttttggcaca aaaatgtgtt caaaatggtt tttgtgtgat aagtggtgga ggtggtggta
    13921 ttatgcgtgc agccaacgaa ggtgcttttt cacaaaaaaa taatacaaat tcaatgagtt
    13981 ctgtagggtt taatatattt ttacctcacg agcaaaaact taatgatttt gtagaatata
    14041 atattacttt tgagagctta gccatacgca aaatggctct tattgaaaag agtctagctt
    14101 ttgtgatctt cccaggcggc tttggaacac ttgatgaatt gtgtgaaatt cttacattaa
    14161 aacaattaga atttaaaaaa gatgttccta ttattttgtt tgggagtgaa ttttggcgag
    14221 gttttgatga gttcgtcaga aattctttac tcaaacttga agtgatttct aaaggagatg
    14281 agctaaagta taaaatcact gacgacttgg attttataat taatacttta aaggaaattt
    14341 aatgaaaatt ctagtcgcta tgagcggtgg agttgatagt acagtcactg cttataaact
    14401 taaaaattta ggtcatgaag ttataggttg ttatatgaaa cttcatggca aaccaaatta
    14461 tcacgaagaa aatatcaaaa aagtagaaaa agttgcaaac tttttgcaaa ttccttatca
    14521 tattttagac ttacaagaag attttaaaaa caaagtttac atgccttttg tggatactta
    14581 taaagagggt aaaacaccaa atccttgcgc tttatgtaac cgttttatca aacttggaaa
    14641 acttttagaa tttgctaaaa gtttaggttg tgaaaaactt gccacagggc attatgcaag
    14701 acttgaaaac aacttaataa aaaccgcagt agatgaaagc aaggatcaaa gctatttttt
    14761 ggccagtgca gataaagaag ctttaaaata tcttattttt ccgctaggcg aaatgaaaaa
    14821 agaagatgtg aaaaaatttg cttccactat agaggtttta aaatcttttg ccacccaaaa
    14881 ggaaagttct gaaatttgct ttgttgaaga tacttatgtg caagttttag atcagtttat
    14941 ggatacaaaa attcctggag aagtattaga tagtagcgga aaagtagtag gcaaacatga
    15001 gggctatatg cactatacca taggcaaaag aagaggtttt gaagtgcgtg gagcacatga
    15061 gccacatttt gttttaaaaa tcaatcctaa gcaaaatcaa atcatcgtag gaacaaaaga
    15121 agagcttaaa atcagtgaat ttaacctaaa aaatatcaat ctttttatag acgctaaaga
    15181 gcttgattgc gaagtaaaaa tccgctatcg ttcaaaatcc acaccttgca aggtagaaat
    15241 ttatgaagat aaaagtgcaa aaatcatcct aaaagatcct gtttatgggc ttgctagcgg
    15301 acaaatggca gtcttttatg atcatgataa agtcatagca agtggtttta tagaataatt
    15361 tctaggaatt aattcctaga aattattaat aaaatcctaa aattttccac taaacaagcc
    15421 caacagctat catcactact atatcaacta tggaaatcac aaaacctgta ctccaccatt
    15481 ttttaagagt tacacagcct gttccaaaaa taacaggagc tgttcctatt gcatagtgag
    15541 ttaatgccat cataacatta cctgaagtta tcataataaa agcataaaaa agtggtggtg
    15601 ctcctaaggc aagctgcact ataaaaaaca aaaaacattg ctgatatatg agctgtaatg
    15661 gaagcaaaga aatagtgtgt atataaaaaa gcaaggctta aaaatatcat aatagaaatt
    15721 tccccaagtc ccatagcaga agcaaattca ccttaagctt cagctaaaaa ctgtgtaacg
    15781 ccaagtttgc caagtaaagt tgccatcatt acaagagctg aaaaccatac taaagtattc
    15841 caagcagctt tttcggccaa aacttcccca aaagttaaaa ctccactaat caacaccaaa
    15901 gacaacccaa gcaaagccac actagtcgca tcaagagaaa ttccaaaaaa acaagcccaa
    15961 agctccagcc cataaaagta aaagcgagac aaaaacactg agcatgattt tttcactatt
    16021 tttcattttt acaagttctt ttaatttatc tttagcaaaa gtagaagcat taggcgtgga
    16081 tttaatttct agcggagaga gaaaataaag caccaaagga tttggagctg tagctgtaat
    16141 aaacatagct gatgaaatag gattggctct tgataattta ccaaagaaag ataagtgcct
    16201 attttatttt gtgttccatc ttcaggagtg gatttaaaac ttcttgcaat aacttgaact
    16261 ataggattta tgatagcccc tgctcttgca gtatttgaag gagtaactgg agctaaaata
    16321 gtttcacaaa aagctataga ataagcaata cctaaggttt ttttaccaag aatactgata
    16381 aaatgataag ccaaatgctc tccaagtcct gttttaataa ctccacgagc cacaataata
    16441 gaataactat aagctaaata agagaatttg aaaaaccact taaagcgtct tttatacccg
    16501 ttttagattt taaatttgat atagcagtat ttaccttttc atcttatact cttttgatat
    16561 aaaaaatcaa gtactgaagt atttaaagga aattttagtc tcatcaataa gttgttgcgt
    16621 agaagttttc gaagtagctt tggtgtaaat tttacttaga ttttcaattg ggtagtggta
    16681 atgccactaa gagctactat ggcaatagct atcatacaaa cagcccccaa aggcattact
    16741 tgtaaaatca ctgccataat cacagcaata aaaagcccaa gaaaatgcca agaattatct
    16801 tccaaaccta caaggagtag gtataggcca aaacacagct gcaattaaaa tacgcagcac
    16861 caacaaggga attttctttc tatccattgt ttatcctttg atattggtaa tgaaattcta
    16921 gttaactaat attttaat
//
LOCUS       DAPIWB010000039        16804 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.040, whole genome shotgun sequence.
ACCESSION   DAPIWB010000039 DAPIWB010000000
VERSION     DAPIWB010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16804)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16804)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16804
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.040"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            115..3078
                     /gene="cas9"
                     /locus_tag="RJ266_001065"
     CDS             115..3078
                     /gene="cas9"
                     /locus_tag="RJ266_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790896.1"
                     /note="Cas9, originally named Csn1, is the large,
                     multifunctional signature protein of type II CRISPR/Cas
                     systems. It is well known even to general audiences
                     because its RNA-guided endonuclease activity has made it a
                     popular tool for custom editing of eukaryotic genomes;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR RNA-guided endonuclease Cas9"
                     /protein_id="HDV7354817.1"
                     /translation="MARILAFDIGISSIGWAFSENDELKDCGVRIFTKAENPKTGESL
                     ALPRRLARSARKRLARRKARLNHLKHLIANEFKLNYEDYQSFDESLAKAYKGSLISPY
                     ELRFRALNELLSKQDFARVILHIAKRRGYDDIKNSDDKEKGAILKAIKQNEEKLANYQ
                     SVGEYLYKEYFQKFKENSKEFTNVRNKKESYERCIAQSFLKDELKLIFKKQREFGFSF
                     SKKFEEEVLSVAFYKRALKDFSHLVGNCSFFTDEKRAPKNSPLAFMFVALTRIINLLN
                     NLKNTEGILYTKDDLNTLLNEVLKNGTLTYKQTKKLLGLSDDYEFKGEKGTYFIEFKK
                     YKEFIKSLGDHSLSQDDLNEIAKDITLIKDEIKLKKALAKYDLNQNQIDSLSKLEFKD
                     HLNISFKALKLITPLMLEGKKYDEACNELNLKVAINEDKKDFLPAFNETYYKDEVTNP
                     VVLRAIKEYRKVLNALLKKYGKVHKINIELAREVGKNHSQRAKIEKEQNENYKAKKDA
                     ELECEKLGLKINSKNILKLRLFKEQKEFCAYSGEKIKISDLQDEKMLEIDHIYPYSRS
                     FDDSYMNKVLVFTKQNQEKLNQTPFEAFGNDSAKWQKIEVLAKNLPTKKQKRILDKNY
                     KDKEQKNFKDRNLNDTRYIARLVLNYTKDYLDFLPLSDDENTKLNDTQKGSKVHVEAK
                     SGMLTSALRHTWGFSAKDRNNHLHHAIDAVIIAYANNSIVKAFSDFKKEQESNSAELY
                     AKKISELDYKNKRKFFEPFSGFRQKVLDKIDEIFVSKPERKKPSGALHEETFRKEEEF
                     YQSYGGKEGVLKALELGKIRKVNGKIVKNGDMFRVDIFKHKKTNKFYAVPIYTMDFAL
                     KVLPNKAVARSKKGEIKDWILMDENYEFCFSLYKDSLILIQTKDMQEPEFVYYNAFTS
                     STVSLIVSKHDNKFETLSKNQKILFKNANEKEVIAKSIGIQNLKVFEKYIVSALGEVT
                     KAEFRQREDFKNELR"
     gene            3065..3955
                     /gene="cas1"
                     /locus_tag="RJ266_001066"
     CDS             3065..3955
                     /gene="cas1"
                     /locus_tag="RJ266_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR-associated endonuclease Cas1"
                     /protein_id="HDV7354818.1"
                     /translation="MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINII
                     VLESLQASLSSALFNAFARHKIILLTCDETHSINGIFTPFLGHFQSAKIAKEQMNVSA
                     QKKAILWQKIIKNKILNQAFVLKKHNKIEQSNELINLAKKVSLNDSKNIEAVAAALYF
                     KTLFGVSFSRDELCFENSALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALC
                     DDLIEVFRASVDDCVLKLKGESEFLSKDDKRALIGNLQSKINFDGQNYPLNRAINHYV
                     ANFKNALLYEDELKIVKFDD"
     gene            3948..4379
                     /gene="cas2"
                     /locus_tag="RJ266_001067"
     CDS             3948..4379
                     /gene="cas2"
                     /locus_tag="RJ266_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
                     /protein_id="HDV7354819.1"
                     /translation="MIEDKFMRVLLMFDVPTKSKKEQKLASKFRNNLIKLGYFMLQFS
                     VYMRICKGLSSAKSSIENVKKILPPYGNVRALIITEKQFDKMELLLGGIVFNEKVNNE
                     TNLTLFDIDSHGEFKYKNSNNEEIQLNKKQEKYHQQNLFEF"
     repeat_region   4525..4758
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=4525..4560
                     /rpt_unit_seq="attttaccataaagaaatttaaaaagggactaaaac"
     gene            complement(4875..6065)
                     /locus_tag="RJ266_001068"
     CDS             complement(4875..6065)
                     /locus_tag="RJ266_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HDV7354820.1"
                     /translation="MLMSYEESLKILHSHIKTYEKIEKIALTECLGRILAQDIKAPKN
                     QPEFPTSAMDGYAIKFEDQDKPLKILGLTPAGTMPQFSVQNGTCVKTFTGSLMSEGSD
                     TLVPVENIRIENDTLFIEKKVPQAFAVRAVGENYKKDEILLKKGTRLNYSEIALLAEL
                     GFFHISVFIKPIVGVLSSGSEIKDLGEALENPAQIRSSNHIAIANLAKNLNCNTRVFP
                     LLKDDEKATFSTLESALQSCDILVTTGGVSMGDFDFLKKAIKEYEIIIDKADIKPGRH
                     IKIAKANEKFIIALPGFPYSAMVMFNLYAREILNSWLLQPKDYICKAFLQGSYKKKTP
                     YLEFVACNVEFKNGRILANLEGKKEGSSAIINNLNNKAALMVVPKECEILENESLVDI
                     IFMP"
     gene            complement(6069..6515)
                     /locus_tag="RJ266_001069"
     CDS             complement(6069..6515)
                     /locus_tag="RJ266_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HDV7354821.1"
                     /translation="MEHFTLYQGSLDIPKIYSQWYEFAKDKNCGALLTFCGIVREEGG
                     IEALSFDIYEPLLKKWFDEWQKRVDFDGISLLFAHSIGDVAVHESSYFAGILSKQRKL
                     GLKLLNEFVEDFKASAPIWKYDVINKERIYAKERSTKLCGAGLLKG"
     gene            complement(6516..6737)
                     /locus_tag="RJ266_001070"
     CDS             complement(6516..6737)
                     /locus_tag="RJ266_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HDV7354822.1"
                     /translation="MVKVEFLGPINKENLELEVKNLKELKEILQKDESLKEWLELCAV
                     SLNDEIIFDENTKLKTGDKIALLPPVCGG"
     gene            complement(6739..8280)
                     /gene="cueO"
                     /locus_tag="RJ266_001071"
     CDS             complement(6739..8280)
                     /gene="cueO"
                     /locus_tag="RJ266_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase CueO"
                     /protein_id="HDV7354823.1"
                     /translation="MNRRNFLKFNALTLASMGVAYANPMHDMHSMHKNHSINHDLDTS
                     FINFAPKNLKLLDPKQFPQGEILKALPLLKNESKEKNIFRATLEIKENHIELIKGKKT
                     LFYTYNGLAPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAG
                     EERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHLKEKDLMI
                     SDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNERIRIYNATAARYLN
                     LRIQGAKFILVGTDGGLIEKAIYKEELFLSPASRVEVLIDAPKDGNFKLESAYYDRDK
                     MMVKEEPNTLFLANINLKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQMHGMMGK
                     SEGELKIALASMFLINGKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFEL
                     ISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGN
                     LEVKE"
     gene            8401..9549
                     /gene="nspC"
                     /locus_tag="RJ266_001072"
     CDS             8401..9549
                     /gene="nspC"
                     /locus_tag="RJ266_001072"
                     /EC_number="4.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxynorspermidine decarboxylase"
                     /protein_id="HDV7354824.1"
                     /translation="MFYEKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFA
                     FSGAMKIVGEYLKGCTCSGLWEAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVF
                     NSLAQFHKFQSKTQKNSLGLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAI
                     EGLHFHALCEESADALEAVLKVFEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIAL
                     CKNFSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIM
                     PYTSEVLNARILATRENEKISDLKENEFAYLLTGNTCLAGDVMGEYAFDKKLKIGDKI
                     VFLDQIHYTIVKNTTFNGIRLPNLMLLDHKNELQMIREFSYKDYSLRN"
     gene            9853..10566
                     /locus_tag="RJ266_001073"
     CDS             9853..10566
                     /locus_tag="RJ266_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD family protein"
                     /protein_id="HDV7354825.1"
                     /translation="MEALMDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTM
                     QECLFDENLKSNFDILLKHLDDENSIQAFFKEYDLLFLSLKNSIPTTFSYIEEGFENS
                     NPLLCVRQILVKSKIRRNEKFFKESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINK
                     SIDEFLGDVFMNKNANLYKEIASIAMAFMEFERLCFEVEKPAKINSKKVQNDLSRSEF
                     LRREANKQRRTREKSQGIS"
     gene            10541..10732
                     /locus_tag="RJ266_001074"
     CDS             10541..10732
                     /locus_tag="RJ266_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HDV7354826.1"
                     /translation="MKNRREFLKKSAFALGAAGVLGSTTLALAKDEERKDLVKGKSKK
                     KEVLFQRSANWENYYIKAE"
     gene            10732..11274
                     /locus_tag="RJ266_001075"
     CDS             10732..11274
                     /locus_tag="RJ266_001075"
                     /inference="COORDINATES: protein motif:HMM:NF016750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HDV7354827.1"
                     /translation="MSSVGENIKLTRRSFLKMAALSSLATPLLARSETLREASADELK
                     EAYEGSKKVKTVCTACSVGCGIIAEVQNGVWVRQEIAQDHPVSSGGHCCKGSDMIDMV
                     RSHVRLKYPMKKENGEWKRISYEQALSEIGEKLAAYRKENPESVMFLGSAKMSNEQAY
                     YVRKFAAFFGTNNVDHQARI"
     gene            11323..13536
                     /locus_tag="RJ266_001076"
     CDS             11323..13536
                     /locus_tag="RJ266_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002896872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HDV7354828.1"
                     /translation="MTNHLGDIQRSKCIIIIGANPAVNHPVGFRHFLKAKEKGAKLIV
                     VDPRFTKSAAKADIYARIRPGTDIAFMYGMLKIIFDEGLEDTKYLDERVFGIDKIREE
                     AAKWTAEEVENVTGISKELLVQITHEVAKNKPTTLIWAMGLTQHTVGTSNTRLAPIVQ
                     MVLGNIGKFGGGVNILRGHDNVQGASDMACLSENLPGYYPLNEATWRYYAKIWGVDYE
                     WLLGNFVSKDWMHKTGLSLARWWAAALNGKDGNDAIDNAGTPLKALVVMGNGITSTAQ
                     QVKVKEGLEALELLVLADPFVNEAGIIAERKDGIYLLPAATQFETSGSVTATNRSGQW
                     RFKVVDPLYESMEDQEILFELAKKLGFYEDFTKTLRDEKGEIVWPENATREIAKAVRS
                     IGLNGWSPERLKKHTLYWDKFDEVTLEGKDEVAGEYYGLPWPCWSDKHPGSPVLYNTD
                     IEVAKGGMGFRNNFGLEYEGESLLAKNAPLNSPIDTGYPQITKDNIEKVLGITLSAQE
                     KEKMGSTWSYDDSNIIATKCIEKGIVPYGNAKARAVVWTFKDKIPLHREPLHSPRNDL
                     VQKYPSFEDQKALYRVDTKFVSVQQAKDYSKEFPLNLVTARLVNLNGAGMENRASMYL
                     TRLTPEMFCEINPELAKEQDIKAGDMIWVHSPEGTKIHVRVKVNPGVAKDMIFLPFHF
                     TGVMQGVDLTHNFPKGTKPYASGESANTVTNYGYDIMCQIPETKGGLCRISKDGK"
     gene            13533..14174
                     /locus_tag="RJ266_001077"
     CDS             13533..14174
                     /locus_tag="RJ266_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HDV7354829.1"
                     /translation="MSKVNFANLEKERLKFFCDNERCIDCNGCAVACDEAHELPIHIR
                     RRRVITLNEGIQGKEVSTSISCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCG
                     YCLYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPEATNSEKERELYGQNRIAEGKVP
                     VCAAMCSTKALLVGESSKIEEIYHNRLMNRNYGIPNPSESLEWKIAYTGKERL"
     gene            14171..15103
                     /locus_tag="RJ266_001078"
     CDS             14171..15103
                     /locus_tag="RJ266_001078"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HDV7354830.1"
                     /translation="MRKVFVTLLLSVASLFAYGSERMGQDTQIWDFHRITNIPNYDTF
                     GKLWTTLQGEYIATIALIAVIAVLSAFALHYMVIGPKQFSHDGKKIYAFTLFERLFHF
                     IAAISWVILVPTGFVMMFGATFGGGLFVRVCKNLHAFATVLFIISIIPMFLWWIKRML
                     PASYDIRWMMIVGGYLSKVKRPVPAGKFNFGQKSWYYIAVFGGFLMIITGGFMYFLDF
                     NSTAIQGLFGLTQIELLRISAIVHNFLGIVCAVFFGVHIYMAVFAIKGSIHSMISGYK
                     EEEEVYILHSYWYKELSNKKQIEPSFSYDPNVKI"
     gene            15270..16052
                     /gene="fdhD"
                     /locus_tag="RJ266_001079"
     CDS             15270..16052
                     /gene="fdhD"
                     /locus_tag="RJ266_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HDV7354831.1"
                     /translation="MDPLFTTQILKYKGDDSFTCDDTLVREIKLEIFINNERVGALMA
                     TPVDEQALAIGYLMSENIIAKVSDIESIETKDDGMSVHIKAKIDKENLAKLNAEGVVI
                     SGCGRAHTANIDPEAIEASKISSDAKFSKDEILKQMSTFYTQCELYEKTGCVHTAKLF
                     VDEKTFFIGEDIAQHNTIDKALGKARLAGVDLSQCFLMVSGRLSSEMVAKAVMHKISV
                     LVSRTAPTCLGVMIARKFDLTLCGFARENKINIYSGEFRIHG"
     gene            16045..16782
                     /locus_tag="RJ266_001080"
     CDS             16045..16782
                     /locus_tag="RJ266_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HDV7354832.1"
                     /translation="MDKNQEKEIISYMRELLNSNEKLDCGTAFKIAKKFNVNIEKIGQ
                     LADENHMRIDNCELGQFGHLDFEKAKIEVLKKIEPSLDEKRRIFCKDARDIAKEGCGL
                     KSMRSALKAYKVDVKYCQLGCFKEKKGKQFIVRTKTWIENADGDLLFGRGKTELLELI
                     GQTGSLLHASKLMGINYKKAWMHLQTLQKNSQEILVSTRQGRSKESGTKLTPRALELM
                     ENYSILQKDIEEYANKRFKELFLKGKK"
BASE COUNT         5965 a         2246 c         3066 g         5527 t
ORIGIN      
        1 ttgtattata aaattaacat atatagtttg gttactgaaa agtttatgtt tgtttaaaaa
       61 atgatttttg tattataatt atacacaaat cataaatatt aaaaaggatc tagtgtggca
      121 agaattttgg catttgatat aggaataagc tctattggct gggcatttag tgaaaatgat
      181 gagttaaaag attgtggagt taggattttt acaaaggctg aaaatcccaa aacaggagaa
      241 tccttagcct tgccaagacg ccttgcaaga agtgctagaa aacgccttgc tagacgcaaa
      301 gcaaggctaa atcacttaaa acatttaatc gcaaatgaat ttaagttaaa ttacgaagat
      361 tatcaaagct ttgatgaaag tttagccaag gcttataaag gatctttaat tagcccttat
      421 gagttaagat ttagagcttt aaacgagctt ttaagtaagc aagattttgc aagagtgatt
      481 ttacatattg caaaaaggcg tggctatgat gatattaaaa atagtgatga taaagaaaaa
      541 ggtgcgattt taaaagctat caagcaaaat gaagaaaaac tagcaaatta tcaaagtgtg
      601 ggcgagtatc tttataaaga gtattttcaa aaattcaaag aaaattccaa agaatttaca
      661 aatgttagaa ataaaaaaga aagttatgaa cgctgcatag cgcaaagttt tttaaaagat
      721 gaattaaagc ttatttttaa aaaacaaaga gaatttggct tttctttttc aaaaaaattt
      781 gaagaagagg tgcttagtgt agcattttat aaaagggctt taaaagattt ttctcatttg
      841 gtgggaaatt gtagtttttt taccgatgaa aaaagagcgc caaaaaattc gcccttagct
      901 tttatgtttg tagcacttac aagaattatc aatcttttaa acaatcttaa aaatactgaa
      961 ggaattttat atacaaaaga tgatttaaac acgcttttga atgaagtttt aaaaaacggc
     1021 actctaactt ataaacaaac aaaaaagctt ttgggcttaa gcgatgatta tgaatttaaa
     1081 ggagaaaaag gaacttattt tattgagttt aaaaaataca aagaatttat aaaatcccta
     1141 ggtgatcata gtttaagcca agatgattta aatgaaatag caaaagatat tacccttata
     1201 aaagatgaga ttaaacttaa aaaggcttta gcaaaatatg atttaaatca aaatcaaatt
     1261 gatagtttaa gcaaattgga atttaaagac catttaaata taagttttaa agccttaaaa
     1321 cttattactc ctttaatgct tgaaggtaaa aaatacgatg aagcttgtaa tgagcttaat
     1381 ttaaaagtag caatcaatga agataaaaaa gattttttac ccgcatttaa tgaaacttat
     1441 tataaagatg aggtaactaa tcctgtggtt ttaagggcga ttaaagaata tagaaaggtc
     1501 ttaaatgcct tacttaaaaa atacggtaaa gtgcataaaa taaacattga attagcaaga
     1561 gaagtaggta aaaatcacag ccaaagagct aaaatagaaa aagagcaaaa cgaaaactac
     1621 aaggccaaaa aagacgccga acttgaatgt gaaaaactag gcttaaaaat aaatagcaaa
     1681 aatattttaa aattaagatt atttaaagaa caaaaagaat tttgtgctta tagtggagaa
     1741 aagattaaaa ttagtgattt gcaagatgaa aaaatgcttg aaattgatca catttaccct
     1801 tattctagaa gttttgatga ttcttatatg aataaagttt tagtttttac caagcaaaat
     1861 caagaaaaac ttaatcaaac cccctttgaa gcctttggca atgatagtgc aaaatggcag
     1921 aaaattgaag ttttagcaaa aaatttgcct actaaaaagc aaaaaagaat tttagataaa
     1981 aattacaaag acaaagagca aaaaaacttt aaagatagaa atctaaacga tactcgctac
     2041 atagcaaggc ttgttttaaa ctacactaaa gattatttag attttttacc tttaagcgat
     2101 gatgaaaata caaaattaaa cgatacacaa aaaggctcaa aagtgcatgt agaagcaaaa
     2161 agcggtatgc ttacatcggc tttaagacac acttggggct ttagcgctaa ggatagaaat
     2221 aaccatcttc atcacgccat cgatgcagta attattgctt atgcaaacaa ctctatcgta
     2281 aaggcttttt cagattttaa aaaagagcaa gaaagcaaca gtgcagaact ttatgcaaaa
     2341 aaaattagtg aattagatta taaaaacaaa aggaagtttt ttgagccttt tagtggtttt
     2401 aggcaaaagg ttttagataa aattgatgaa atttttgtct caaaacctga gagaaaaaag
     2461 ccaagtggag ctttacatga agaaacattt agaaaagaag aagaattcta tcaatcatac
     2521 ggcggaaaag aaggagtttt aaaagcccta gagcttggta aaatccgcaa agtaaatggt
     2581 aaaatagtta aaaatggcga tatgtttaga gtggatattt ttaaacacaa aaagacaaat
     2641 aaattttatg ctgtgccaat ttatactatg gattttgctt taaaagtatt accaaataaa
     2701 gctgtagcac gaagtaaaaa aggtgagata aaagactgga ttttaatgga tgaaaattat
     2761 gagttttgct tttctttata taaagatagt ttgattttaa ttcaaactaa agatatgcaa
     2821 gagccagaat ttgtttatta taatgctttt acaagctcta ctgttagttt gattgtttca
     2881 aaacacgata ataaatttga aacgctaagc aaaaatcaaa aaatattgtt taaaaatgca
     2941 aatgaaaaag aagtaatcgc aaaaagcata ggaattcaaa atctaaaagt atttgaaaaa
     3001 tacatagttt cagcacttgg agaagtgaca aaggctgagt ttagacaaag agaagatttt
     3061 aaaaatgagt tacgatgaag cttttaaaac actgcttatt agctctaatg ccaagctaaa
     3121 tttagagcta aatcatcttg tgattaagca agatgaaaat atagccaaat tgtttttaaa
     3181 agatataaat atcatcgttt tagaaagctt acaagcaagc cttagttccg cactttttaa
     3241 tgcctttgca aggcataaaa tcatcttgct aacctgcgat gaaactcata gtataaatgg
     3301 tatttttact ccttttttag ggcattttca aagtgcaaaa atcgcaaaag agcaaatgaa
     3361 tgtaagtgct caaaaaaagg ctattttatg gcaaaaaatc attaaaaata aaatcctaaa
     3421 tcaagccttt gttttgaaaa aacacaataa aatagagcaa agcaatgagc ttataaattt
     3481 ggccaaaaaa gtaagcttaa atgatagtaa aaatatcgaa gctgttgcag cggcgcttta
     3541 ttttaaaact ttgtttggcg tttctttttc aagagatgag ctttgctttg aaaattctgc
     3601 tttaaattat ggctatgcaa tcattagggc ttgtattatt agagcagttt gtataagtgg
     3661 gcttttgcct tggcttggca taaagcacga taatatttat aattcttttg cactttgtga
     3721 tgatttgata gaagtgttta gggctagtgt tgatgattgt gttttaaagc ttaagggtga
     3781 aagtgagttt ttaagcaaag atgacaaaag agcgttgatt ggcaatttac aaagcaaaat
     3841 caattttgat gggcaaaatt atcctttaaa cagagcgata aatcattatg tggcgaattt
     3901 taaaaatgct ttattgtatg aagatgagct aaagatagtg aaatttgatg attgaagata
     3961 aatttatgcg cgtgcttttg atgtttgatg tgccaactaa aagtaaaaaa gagcaaaaac
     4021 tagcaagtaa atttagaaac aatcttataa aattaggtta ttttatgctg caatttagcg
     4081 tttatatgcg tatttgcaag ggtttaagtt ctgcaaaaag ttctattgaa aatgtaaaaa
     4141 agattttgcc accttatgga aatgtaaggg ctttaatcat cactgaaaag caatttgata
     4201 aaatggagct tttgcttggt ggcatagttt ttaatgaaaa agttaataac gaaactaatt
     4261 taacgctttt tgatatagat agtcatggag aatttaaata taaaaattca aataatgaag
     4321 aaatacaact aaacaaaaaa caagaaaaat atcatcagca aaatttattt gaattttaaa
     4381 agcggtttta ggggattgta accccgcaga gtcccgcaaa ctctttattt tagtcccttt
     4441 ttaaatttct tattgagatt atagcataat ttttgctatt tttcatcaaa aaacccctaa
     4501 attttcatta tctggtaaat atctatttta ccataaagaa atttaaaaag ggactaaaac
     4561 ctgcgctaca aattcattta tttcagtgca attttaccat aaagaaattt aaaaagggac
     4621 taaaacaagt aagtttctat ctttttcagc actttgattt taccataaag aaatttaaaa
     4681 agggactaaa actgatattt gtagttaaaa aacatcagaa taattttacc ataaagaaat
     4741 ttaaaaaggg actaaaaacc ctagtggatt gaaactctgc tagggctaat tacttcacta
     4801 aaaggaggtt gcaaatttga aacttattga aatttagggt tgattaaaat cgaaataaaa
     4861 ttatttaaat aattttaagg cataaagata atatccacta aactttcatt ttctaaaatt
     4921 tcacattctt ttggtactac cataagggca gctttattgt taagattatt tataatcgca
     4981 ctagagcctt ctttcttgcc ttcaagattg gctaaaatgc gtccattttt aaattccaca
     5041 ttacaagcga caaattccaa ataaggtgtt tttttcttgt aacttccttg taaaaaggct
     5101 ttgcaaatat agtctttagg ctgaagtaac caagagttta aaatctctct tgcgtaaaga
     5161 ttaaacatta ccatagccga gtaaggaaaa cctggtaagg cgatgatgaa tttttcatta
     5221 gccttagcta ttttgatatg tctacctggt tttatgtcgg ctttatcgat gatgatttcg
     5281 tattctttga tggctttttt taaaaagtca aaatctccca tagaaacccc gcccgttgta
     5341 accaaaatat cacaactttg caaagcactt tcaagggtgg aaaaagtggc tttctcatca
     5401 tcttttaaaa gaggaaaaac ccttgtattg caatttaaat ttttagctaa attagctatg
     5461 gcgatatgat ttgaagagcg gatttgagca ggattttcca aggcttctcc tagatctttg
     5521 atctcacttc cactacttaa aacccctaca ataggcttta taaacacact aatgtgaaaa
     5581 aatccaagtt cagccaaaag agctatctcg ctataattta accttgtgcc ttttttgagt
     5641 aaaatttcat cttttttata gttttctcct accgcacgca cggcaaaagc ttgaggaact
     5701 tttttttcta taaaaagagt atcattttct atgcgtatat tttcaacagg gactaaagta
     5761 tcgcttcctt cgctcatgag tgagcctgta aaggttttta cacaagtgcc attttgcacg
     5821 ctaaattgtg gcatagtgcc cgcaggtgtg aggcctaaaa tttttaaagg cttatcttga
     5881 tcttcaaatt tgatcgcata accatccata gccgaagttg gaaattcggg ctgattttta
     5941 ggggctttta tgtcttgagc taaaatgcgt cctaaacact ctgtaagagc tattttttca
     6001 atcttttcat aggttttgat atgagaatgt aaaattttta aactttcttc ataagacatt
     6061 aacatttttt atccttttaa aagtcctgca ccgcaaagtt tggttgatct ttctttggcg
     6121 taaattcttt ctttgtttat cacatcatac ttccaaatgg gtgcacttgc tttaaaatct
     6181 tcaacaaatt cattaagaag tttaagccct aattttcttt gtttgcttaa aattcctgca
     6241 aaatacgagc tttcatgaac cgccacatcg cctatagagt gagcaaaaag caagctaata
     6301 ccatcaaaat ctactctttt ttgccactca tcaaaccatt tttttaaaag cggttcataa
     6361 atatcaaaac taagtgcctc aatgcctcct tcttcacgca caataccaca aaaagtcagt
     6421 aaagcaccgc agtttttatc cttggcaaat tcataccatt ggctataaat tttaggaata
     6481 tctaaagaac cttgataaag tgtaaaatgt tccatttaac ccccgcaaac tggcggtaaa
     6541 agtgctattt tatcaccagt ttttaactta gtgttttcat caaaaatgat ttcatcattt
     6601 aaagataccg cacaaagttc tagccattct tttaaactct catctttttg caaaatttct
     6661 tttaattctt ttaaattttt tacctcaagt tctaaatttt ctttatttat ggggcctaaa
     6721 aattccactt ttaccatttt attcctttac ttctaaattt cccatcattc ctaaatcttc
     6781 atgttctaaa atatggcaat gatacattct aagcccttta aaatcttgtt tcattctaag
     6841 tcttaactct tcattaggac gcacatttat agtatctctt aaggctctaa attcggcttt
     6901 ttgaactttg ccattgagtt ttgatgagat gagttcaaat tgcgtgccat gtatatggaa
     6961 aggatgatcc atgtgagatt tgtttatcac tatccagtct tcaactactc caagtttgga
     7021 gcttaaatca atgcgtttta aatcatagct tttgccattg attaaaaaca tagacgcaag
     7081 agcgattttt aattcacctt cactttttcc catcatacca tgcatttgca tatgatcttc
     7141 actcatgatt atttctttaa attccttagg ttcttctgaa ggtttgaaaa tttttaaatt
     7201 ttttggaagt tctacatttt ctttttttag gttaatattg gctagaaata gggtattagg
     7261 ttcttctttt accatcattt tatccctatc ataataagca ctttctagct taaaattccc
     7321 atcttttgga gcgtcgatta aaacttctac acgagaagca ggacttaaga aaagttcttc
     7381 tttataaata gctttttcta taagtccacc atcagtacca acaagtataa acttagctcc
     7441 ttgtatgcgt aaatttaaat atcttgctgc agtagcatta taaatgcgta tgcgttcgtt
     7501 tgtggcgagt ttgattttag gtttaaattg tccattgatg agtacaaatt ctccttctct
     7561 accatttagc caatcattta ggttattgtt tggaatttga gcgttttcat caagacgcaa
     7621 atcgctaatc atcaaatctt tttcttttaa atgacttaaa gcatcttttt ttgctttgat
     7681 cacaaaagcc cccgctaaac ccataaaaac ttgtttagaa gccgtataat gaggatgtgg
     7741 atgataccag taagttcctg cgctatcttg aggaatttca aaacgatata ttctttcttc
     7801 tcctgctaag ataggatcat gtgggcttcc atcttgatca ggtggcacag gaacgccatg
     7861 ccaatgtata gttgtagctt ctttgagttt gtttttgact aaaatttcaa gtttatctcc
     7921 ttcaaaaact tctatttttg gagcaggtgc taagccattg taagtataaa ataaggtttt
     7981 tttacctttg ataagttcta tgtgattttc tttgatttct agggtagcac gaaaaatatt
     8041 tttttcttta ctttcatttt tgagtaaagg caaggctttt aaaatttctc cttgggggaa
     8101 ttgttttgga tctaaaagtt ttaaattttt tggagcaaag ttgataaaag aagtatctaa
     8161 gtcatgattt atagaatgat ttttatgcat ggagtgcata tcgtgcatag gatttgcata
     8221 ggctacaccc atacttgcta gagtaagtgc attaaatttt aaaaaatttc ttctattcat
     8281 tagtttttcc ttttgcttga ttttttgtat tatagtcatt atttttttag ttttagtaaa
     8341 tatttatgaa aatttggttt aattttgtta tgattttagc aatttaatca aggaaaaata
     8401 atgttttatg aaaaaattca aactccagct tatattttag aagaagataa attaagaaaa
     8461 aactgtgagc ttttagcaag tgttggtgaa aaaagtggtg ctaaagtgct tttagcttta
     8521 aaaggttttg ctttttcagg agcgatgaaa attgttggag aatacctaaa aggttgtact
     8581 tgtagcggac tttgggaagc aaaatttgct aaagaataca tggataaaga aattcatact
     8641 tattcacctg cttttaaaga agatgaaata ggtgaaatag ccagtttatc tcatcatata
     8701 gtgtttaatt ctttagctca atttcataaa tttcaaagca aaacacaaaa aaattcctta
     8761 ggtcttcgtt gcaatgttga attttctcta gccccaaaag aactttacaa tccttgtgga
     8821 agatactcaa gacttggaat tcgtgctaaa gattttgaaa atgtggattt aaatgctata
     8881 gaaggacttc attttcacgc actttgtgaa gaaagtgctg acgctttaga agctgtttta
     8941 aaggtctttg aagagaaatt tggtaaatgg atagggcaaa tgaaatgggt gaattttgga
     9001 ggaggacatc acatcaccaa aaaaggctat gatgttgaaa aacttattgc tttgtgtaaa
     9061 aatttcagcg ataaatatgg tgtacaagtt tatcttgaac caggtgaagc ggtaggttgg
     9121 caaacaggaa atttggttgc tagtgtagta gatatcatag aaaatgaaaa acaaattgcc
     9181 attttagata cttcaagcga agcacatatg ccagatacta tcatcatgcc ttatacaagt
     9241 gaagttttaa atgctagaat tttagccaca agagaaaatg aaaaaatttc agacttaaaa
     9301 gaaaacgaat ttgcctattt acttactgga aatacttgtt tagcgggtga tgtaatggga
     9361 gagtacgctt ttgataaaaa gcttaaaatc ggcgataaaa ttgttttttt agatcaaatt
     9421 cattacacca ttgtgaaaaa cacaactttt aatggtataa gacttccaaa tctcatgctt
     9481 ttagaccata aaaatgaact tcaaatgata agagaatttt cttataagga ttattcttta
     9541 agaaattagt attatttata atttgcataa aatattaatt ttactcggaa gagaatcaaa
     9601 gatataaatt ttatgcaaag tattttattt tttcaaatat aaaatcaact caaatatcta
     9661 attttcaata ctttgatatg attttttaag attttaaatc cttgtggaat tttattgaaa
     9721 ttcagtgatt tttaaatcaa atagtattaa gataaatcga tttaaaaatc ggctttaaaa
     9781 tgaatattag gtatattttg cataatattc attcaagcaa aatttaaagc tatttttgaa
     9841 aattttgaat gcatggaggc tttaatggat ttggaaaaat taagattagc tagaagtctt
     9901 tattatcaat gtctaggaga gctttttgtt ttttcatttt ctgaagaaag attgtcaaaa
     9961 ttacaagagt atttaaagac aatgcaagaa tgtttatttg atgaaaattt aaaatcaaat
    10021 tttgatatct tgcttaagca tttagatgat gaaaattcta tacaagcatt ttttaaagaa
    10081 tacgatttgc tttttttaag tcttaaaaac agcattccaa cgactttttc ttacatagaa
    10141 gaaggttttg aaaattcaaa tcctttactt tgcgtgcgtc aaattttagt caaaagtaaa
    10201 ataagacgca atgaaaaatt ttttaaagaa agtgaagata gtgttggatt ttgtttattg
    10261 ttgatgagtg aatttttaag gcaaaatgaa gatgatttag ctaaagagct ttttgaaaaa
    10321 gtgatcaata aaagcattga tgagttttta ggcgatgttt tcatgaataa aaatgcgaat
    10381 ttatataagg aaattgcaag tattgcgatg gcttttatgg aatttgaaag actttgcttt
    10441 gaagtggaaa aacctgcaaa aataaattct aaaaaagtgc aaaatgatct atcgcgttcg
    10501 gaatttttaa gaagagaagc aaataaacaa aggaggactc gtgaaaaatc gcagggaatt
    10561 tcttaaaaaa tccgcttttg ccttaggggc tgctggagtg cttggtagca caactttagc
    10621 tctagctaaa gatgaagaaa gaaaagattt ggttaaaggt aaaagcaaga aaaaagaagt
    10681 gctttttcaa agaagtgcta attgggaaaa ttattatata aaggctgagt aatgtcaagt
    10741 gtaggtgaaa atatcaagct tacgcgtcgt tcttttctta aaatggcagc actttcaagt
    10801 ctagcaacac cgttgcttgc tagaagtgaa actttaagag aagcgagtgc tgatgagctt
    10861 aaagaagctt atgaaggtag taaaaaagta aaaacagttt gtacagcctg ttctgtaggc
    10921 tgtgggatta ttgcagaagt gcaaaatggt gtttgggtgc gtcaagaaat cgctcaagat
    10981 catcctgtga gttcaggtgg acattgctgc aagggatctg atatgatcga tatggtgcgt
    11041 tcacatgtgc gtttaaaata tcctatgaaa aaagaaaatg gagaatggaa acgcataagt
    11101 tatgagcaag ctttaagtga gatcggagaa aaactagctg cttatcgtaa agaaaatcct
    11161 gaaagtgtta tgtttttagg ttctgcaaaa atgagcaatg aacaagctta ttatgtacgt
    11221 aaatttgcag cgttttttgg aacaaacaat gtagatcatc aagctagaat ttgacacagc
    11281 gcaacagtcg ccggtgtggc gaatacattt ggttatggcg ctatgacaaa ccatcttgga
    11341 gacattcaaa gaagtaaatg tatcattatc attggggcaa atccagcggt aaatcatcct
    11401 gtgggtttta gacatttctt aaaagcaaaa gaaaaaggtg caaagcttat cgttgtagat
    11461 cctagattta caaaaagtgc agcaaaagcg gatatttatg caagaattcg tccaggaact
    11521 gacattgctt tcatgtatgg aatgctaaaa atcatctttg atgaaggttt agaagataca
    11581 aaatatcttg atgaaagagt ttttggaatc gataaaattc gtgaagaagc ggcaaaatgg
    11641 acagctgaag aggtggaaaa tgttacagga atttctaaag aacttttggt gcaaatcact
    11701 cacgaagtag ctaaaaacaa accaactacg cttatttggg ctatgggttt aactcaacac
    11761 actgtaggaa cttcaaatac acgtttagca cctattgtgc aaatggtact tggaaatata
    11821 ggtaaatttg gtggtggagt taatatctta cgcggacatg ataatgttca aggtgcttca
    11881 gatatggctt gtttgagcga aaatttacca ggttattatc ctttaaatga agcgacttgg
    11941 agatactatg ccaaaatttg gggtgtggat tatgagtggc ttttaggaaa ttttgtaagc
    12001 aaagattgga tgcataaaac cggactttca cttgctagat ggtgggcagc ggctttaaat
    12061 ggaaaagatg gaaatgatgc tatcgataac gcaggaacgc ctttaaaagc tttagtagtt
    12121 atgggaaatg gtatcacttc gactgcacaa caagtaaaag ttaaagaagg tttggaagct
    12181 ttagagcttt tagttttagc cgatcctttt gtaaatgaag caggcattat tgcagaaaga
    12241 aaagatggaa tttatctttt acctgcagca acacagtttg aaacaagcgg aagtgtaaca
    12301 gcaacaaatc gtagcggaca atggagattt aaagttgtag atccacttta tgaaagcatg
    12361 gaagatcaag aaattttatt tgagcttgct aaaaaattag gtttttatga agactttacc
    12421 aagactttac gcgatgaaaa aggtgagatt gtttggcctg aaaatgcaac aagagaaatt
    12481 gcaaaagcag ttagaagtat agggcttaat ggttggagtc ctgaaaggct taaaaagcat
    12541 actttatact gggataaatt tgatgaggta actttagaag gaaaagatga agttgctggt
    12601 gagtattacg ggcttccttg gccttgttgg agtgataagc acccaggttc tcctgtactt
    12661 tataataccg acattgaagt cgcaaaaggt ggtatgggct ttagaaataa ttttggactt
    12721 gagtatgaag gagagagttt acttgctaaa aatgcgcctt taaattcacc tattgataca
    12781 ggttatccac aaattactaa agataatata gaaaaagttt taggtattac tttaagtgcc
    12841 caagaaaaag aaaaaatggg atcaacttgg tcttatgatg atagcaatat catagcaact
    12901 aaatgtatag aaaaaggcat agttccttat ggaaatgcta aagctagagc tgtagtttgg
    12961 acttttaaag ataaaattcc actccaccgt gagcctttac attctccaag aaacgatttg
    13021 gtgcaaaaat atccaagttt tgaagatcaa aaagcgcttt accgcgtgga tactaaattt
    13081 gtgtctgtgc aacaagctaa ggattattct aaagaattcc cgcttaatct tgttactgca
    13141 agacttgtga atttaaatgg tgcaggtatg gaaaatagag catctatgta tctaacgcgt
    13201 ttaacacctg aaatgttttg tgagatcaat cctgaattag caaaagagca agacattaaa
    13261 gcaggagata tgatttgggt acattctcca gaaggtacta aaattcatgt aagagtgaag
    13321 gttaatccag gtgtagcaaa agatatgatt ttcttgcctt tccattttac aggagttatg
    13381 caaggcgtgg atttaacgca caatttccct aaaggaacaa aaccttatgc aagtggagaa
    13441 agtgctaata cggtaacaaa ttatggttat gatatcatgt gtcagattcc agagactaaa
    13501 ggtgggcttt gtagaatcag taaggatgga aaatgagtaa ggtaaatttt gcaaatttag
    13561 aaaaagaacg cttgaaattc ttttgtgata atgagcgttg tattgattgt aatggttgtg
    13621 cggtagcttg tgatgaagca catgagcttc ctattcatat tcgccgtcgc cgtgtgatta
    13681 ctttaaatga aggaattcaa ggaaaagaag tttcaacttc tatttcttgt atgcattgtg
    13741 atgatgctcc ttgttctatc gtttgtcctg tggattgttt ttacatccgt gctgatggta
    13801 ttgttttgca tgataaagaa atttgcatag gttgtggata ttgtctttat gcttgtcctt
    13861 ttggtgcacc acaatttcca aaagatagtg tttttggaaa taaaggcatt atggataaat
    13921 gtactatgtg tgcaggtggc cctgaagcaa cgaattcaga aaaagaaaga gaactttatg
    13981 ggcaaaatcg tatcgcagaa ggaaaagttc ctgtatgcgc tgcgatgtgt tcgacaaaag
    14041 cacttttagt aggtgaaagt tctaaaatag aagagattta tcataataga cttatgaata
    14101 gaaattatgg cattccaaat ccttcggaaa gtttggagtg gaagattgct tacacaggaa
    14161 aggaacgctt atgagaaaag tatttgtaac gcttttatta agcgtagcga gtttatttgc
    14221 ttatggtagc gagagaatgg gacaagatac tcaaatttgg gattttcatc gtattacaaa
    14281 tatcccaaat tatgatactt ttggcaaact ttggacaact ttacaaggtg aatatatagc
    14341 tactatagct ttaattgctg ttattgcggt attatctgca tttgctttgc attatatggt
    14401 tataggacct aagcaatttt cacacgatgg aaagaaaatt tatgctttta cattatttga
    14461 aagacttttt cattttatcg cggcaatttc ttgggtgatt ttagtgccaa ctggttttgt
    14521 gatgatgttt ggggcgactt ttggaggcgg actttttgta agggtttgta aaaatttaca
    14581 tgcttttgca acggttttat ttatcatctc tataatccct atgtttttat ggtggattaa
    14641 aagaatgctt cctgcaagtt atgatatcag atggatgatg atagtaggtg gttatttaag
    14701 caaagtaaaa cgtcctgtac ctgcaggtaa gtttaatttt ggtcaaaaat cttggtatta
    14761 tatagctgta tttggtggat ttttgatgat aatcacaggt ggatttatgt attttcttga
    14821 ttttaattcc acggcaattc aaggtctttt tggtttaact caaattgaac ttttaagaat
    14881 ttcagctata gtgcataatt tcttaggcat agtgtgtgca gtgttttttg gcgtgcatat
    14941 ttatatggca gtatttgcaa tcaaaggcag tatccattct atgattagtg gttataaaga
    15001 agaagaagag gtttatattt tacattctta ttggtataaa gaattaagca ataaaaagca
    15061 aattgaacct agtttttctt atgatcctaa tgtaaaaatt taatctttaa ccgctatgtt
    15121 attgcatagc ggtagtttta agcttttttg aaataaatag aacgaatttt attttataag
    15181 ttgaatctaa aatctatttt tccatatata aatttgttat ttatgttttt ttgatataat
    15241 attatttaaa gatatttaaa ggataaggta tggatccgtt atttacaact caaattttaa
    15301 aatataaagg tgatgattct tttacatgtg atgatacttt agtgcgtgaa attaaacttg
    15361 aaatttttat taataatgaa agagtaggtg ctttaatggc aactcctgta gatgaacagg
    15421 cattagcaat aggatattta atgagcgaaa atatcattgc gaaagtaagc gatattgaga
    15481 gcatagaaac aaaagatgat ggtatgagtg tgcatattaa agcaaagatt gataaagaaa
    15541 atttagcaaa gcttaatgct gaaggtgtag ttataagtgg ttgcggtaga gcacatactg
    15601 ccaatatcga tccagaagct attgaagcga gtaaaattag ttctgatgca aaatttagca
    15661 aagatgaaat tttaaaacaa atgagtactt tttatactca atgcgagctt tatgagaaaa
    15721 caggctgtgt acatacggct aagctttttg tagatgagaa aacttttttt ataggtgaag
    15781 atatagctca gcataatacc atagataaag ctttaggaaa agcacgttta gctggggttg
    15841 atttaagtca atgtttttta atggttagtg gaaggctaag ttctgaaatg gtagctaaag
    15901 cagttatgca taaaatttca gtgcttgttt cacgcacggc tcctacttgt ttaggagtta
    15961 tgatagcaag aaaatttgat ttaacgcttt gtggttttgc tagagaaaat aagattaata
    16021 tttatagtgg agaatttaga attcatggat aaaaatcaag aaaaagaaat catctcatat
    16081 atgagagaat tgttaaatag taatgaaaaa ttagattgtg gtacggcttt taaaattgca
    16141 aagaaattta atgtaaatat agaaaaaatc ggacaattag ccgatgaaaa tcacatgaga
    16201 attgataatt gcgagttggg gcaatttgga catttagatt ttgaaaaagc aaagattgaa
    16261 gtgcttaaaa aaatagaacc tagtttagat gaaaagcgta gaattttttg taaagatgca
    16321 agagatattg ctaaagaagg ttgtgggctt aaaagtatgc gttcagcttt aaaagcttat
    16381 aaggttgatg taaagtattg tcaacttggt tgttttaaag aaaaaaaagg taagcaattt
    16441 atagtaagaa caaaaacttg gattgaaaat gcggatggag atttgctttt tggacgagga
    16501 aaaacagaac ttttagaact tatcggacaa acaggtagtt tattgcatgc ttctaaactt
    16561 atggggatta attataaaaa agcttggatg catttacaaa ccttacaaaa aaattctcaa
    16621 gaaatcttag ttagcacaag gcaaggacgc tctaaagaat caggaacaaa acttactcct
    16681 agagctttgg aattaatgga aaattactct attttacaaa aagatataga agaatacgct
    16741 aataaacgct ttaaagaact atttttaaaa ggaaaaaaat aaatcttcta tcaaaaaata
    16801 ctaa
//
LOCUS       DAPIWB010000040        16164 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.041, whole genome shotgun sequence.
ACCESSION   DAPIWB010000040 DAPIWB010000000
VERSION     DAPIWB010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16164)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16164)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16164
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.041"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(179..1375)
                     /locus_tag="RJ266_001081"
     CDS             complement(179..1375)
                     /locus_tag="RJ266_001081"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HDV7354833.1"
                     /translation="MYLFTSEVVSAGHPDKCADIIADTIVDILLKNDKNSRVASEVFV
                     AGNKVVIGGEVKSNHKLSKADYDNLVKDVLKNIGYDGAGHFSKEQCLHPDEVDVMVFL
                     NEQSPDINQGVDQEDGETGAGDQGIMFGFASCEAEEYMPAAISYARMLCDRVYAYAKA
                     NPHELGVDIKTQVTIDYGTKANFENCKPQSIHTIVVSAPCVESMKIEDLRSLVMKLIL
                     DSNLPKELFDPNKTRILINPTGKYVNHSSLHDSGLTGRKLIVDSFGGYSPIGGGAQSS
                     KDYTKVDRSGLYAGRWLAKNIVAAGLAKKCIVQLSYAIGVAKPTSVSVDCMGTNTSVN
                     DDVLSDFVMQNFSLTPNWIRDKFHLDKPSKETFLYADVAARGQVGQKDYPWEKLDALE
                     QFKKLL"
     gene            1516..2739
                     /gene="sstT"
                     /locus_tag="RJ266_001082"
     CDS             1516..2739
                     /gene="sstT"
                     /locus_tag="RJ266_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HDV7354834.1"
                     /translation="MFSKIIQSYAKGNLIVQICIGIALGILIGISSKEISEIANLLGI
                     LFTSALKAIAPMLVFILILTSICTKDFSQSGAKIKNIIILYIVGTFFASACAVLANFF
                     FPVKLVLDGVQTATNSSPTHMSDIFKDLLFKIVDNPINALSSGNYLGILTWAIAGGIA
                     LKHCSNEAKQVFIDINEGVLKIVKFVVKLAPFGIFGLVANSVAQTGAQGLLSYVKLLI
                     LLVATMLFVTFVINALIVFFYTRKNPFPLIFICLRHSAFFAFFTRSSAANIPVNMALC
                     AKLGIDKEFYGISIPLGATINMAGAAVTIAILSLTAANTVGIEISLLQAFLLSIIATF
                     AACGASGVAGGSLLLIPLACSLFNIDYDIAMKVVAIGFIIGVIQDSVETALNSSTDVL
                     FTAICSKNELNYNIK"
     gene            2749..3636
                     /locus_tag="RJ266_001083"
     CDS             2749..3636
                     /locus_tag="RJ266_001083"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HDV7354835.1"
                     /translation="MRHLITTKDFNKVEIMELFKEASDFLDEKPRTFLKGKSITTIFF
                     ENSTRTLSSFESAARRLGARVLRLDISRSSSSKGETLYDTAANLDAMSPNAIVVRHAN
                     SGVPLILAKHMHCPVVNGGDGKHAHPTQALLDLFTIYNHFQGDVEGKKICIVGDIKNS
                     RVAASNIELLSRFNLDITLVAPPHFMPNTHLKKHYKLDENIIANSDIIMSLRTQTERH
                     NKTVYASLKDYANDFCIQKSLVKDKKLILLHPGPVNRNIDISDEMMSDERTLVLKQVK
                     NGVAIRMAVLKKLILENEG"
     gene            3640..5361
                     /locus_tag="RJ266_001084"
     CDS             3640..5361
                     /locus_tag="RJ266_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HDV7354836.1"
                     /translation="MLEWDLSALFHDKEALQNFTQDQIQQSLNFKKNYENKLYTLNAN
                     EFLQALKDYEILNQALGKIMTYTYLLFAKNTQNGSFYAQYEEECKKIEENLLFFELEF
                     CELAPEKSQKFTTFCKDYDFYLSNLLQNKRYNLSKNEERIMLYLSNTGANAFSRLFDE
                     SMSALKIPFEGKKLSEEEVLSKMYDEDRKIRKKAAKKFSKVLQKNSRLLSFIINMIKT
                     ERKNISLLRGYENAEISRHISNQISQKSVDSLIASAQKHFNLVSQFYKRKKQILGYDE
                     LKDYDRYAPIGKEASFDFKTSKNIVLEAFQAFSPQFYDIAKNAFDQGWIDVYPQENKQ
                     GGAFSHSATSDAHPFVLLNYTNKRRDLFTLAHELGHTIHQKLSYNVSYLNQNTPLTTA
                     ETASVFAEMLVFDFIKDKLKKEELLSLYANKIEDIFATFYRQINFTCFERRLHAQENE
                     LSTEEINKIWMEESQKMFQDSVKLTKNYASWWSYIPHFIHSPFYCYAYAYAQLLVLAL
                     YGLYKSKKCENFKELYIKMLSLGGSVSPKELVGMFGFDIEDENFWEIGIKEIQKLINE
                     FMELQSC"
     gene            5355..5792
                     /locus_tag="RJ266_001085"
     CDS             5355..5792
                     /locus_tag="RJ266_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354837.1"
                     /translation="MLEKILKNENFIHTMQKHCHEIISHLIEENIEFSIVANTNFIDF
                     NPELPKELDVKQNPYALFALGGYTFESIQLNKDFIQFHAGFGNDDFDSFVKVDLGAIT
                     QIQIENSILFVNFSLYKREDSKNLQKSKNIFLNNPKNKDIFKK"
     gene            5789..7864
                     /locus_tag="RJ266_001086"
     CDS             5789..7864
                     /locus_tag="RJ266_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HDV7354838.1"
                     /translation="MNLFEDLNDSQKQAVSHIDGAMLILAGAGSGKTKTITTRLAYLI
                     GEVGIPSYNTLTLTFTNKAASVMRHRALNFLQGNHNPLLCTFHKFGLLFLKLHFERLE
                     RKNSFIVIDTDDTKKIIKDLIHDKNKDNVYDIIKYISYCKNEGKRVSNVFEDLNLLKE
                     HNFEKYQNEYKFANYYRAYEEYLLKQNFVDFDDLLLLSNLILENDINFAKEQSLLYNY
                     ITVDEYQDTNTLQYKILKNLCCMHENITVVGDDDQSIYSWRGAKIENILNFQNDFKNV
                     KLVKLEQNYRSVGTILQAANNLISHNEQRLGKTLICTKDTGENIKILKNENEKDEGLY
                     IAQEVKKLLNSGVEAKEIAVLFRVNALSRAIEEAFMKEKISYKLLSGMRFYERLEIKD
                     LISYLRLILNPNDDLSFRRIINRPKRSIGEKTLKNLEEYAKKRQISLFDALCESDGGV
                     GILTTKKAQNEANIFIQNIHTLKSYDNAKKVFDNIEELFKIKDYFSEQDDGDERIRNL
                     DEFYANLREKLKEDPEASLEDLLSEISLLSDQDNLDEECVCLMSIHASKGLEFDYVFI
                     IGFDEGFFPLNSEENLEEERRLAYVAITRAKKFLTISVANSRFYHGSRANINPSRFLE
                     ESKLINEKSKNQNIQKTSFCKGDLVKHKIFGIGRVVEVNKSGKEEKLNINFGGIMRVI
                     MASFVEKAV"
     gene            7861..8679
                     /gene="truB"
                     /locus_tag="RJ266_001087"
     CDS             7861..8679
                     /gene="truB"
                     /locus_tag="RJ266_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HDV7354839.1"
                     /translation="MNKIFAAFKPRGLSSNAFLSTLKKKYKNKKAGYSGTLDPFAKGV
                     LIVAFGQYTKLFRFLKKTPKTYKATLWLGVYSLSLDDQNIKEIQNIKEFDLTNLKQII
                     NQMQGIISYTPPQFSAKRINGTRAYELAKKGIEVNLKPCQMEVFDCEILSYNHPFLNI
                     EITVSEGAYIRSYCELFARKLGINATLSSLERIKEGKFVYNNEKSLNVLKYIDLKPNF
                     IKDLNKLENGAKIFVEELEFHDEGDYYIETEKYFSIINIKENTVKYLLNKVEKC"
     gene            8673..8900
                     /gene="csrA"
                     /locus_tag="RJ266_001088"
     CDS             8673..8900
                     /gene="csrA"
                     /locus_tag="RJ266_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HDV7354840.1"
                     /translation="MLILSRKENESIIIGEGIEIKVVQTGKGYAKIGIEAPKSLMILR
                     KELVQQVKDENLHSVVQNDIKLDDLSKKLIK"
     gene            8897..9664
                     /locus_tag="RJ266_001089"
     CDS             8897..9664
                     /locus_tag="RJ266_001089"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HDV7354841.1"
                     /translation="MKAYAKANIFLKLTGFDSRKYHLLESRFILLKDVFDELELIDKE
                     SDSKKEFEIISNFKCENNIIQKAYLLLSRRYNNELKELFSKKSLKLTKNIPVCAGLGG
                     GSSDCASFLLLMNETLNLKLNLQELINLSMQLGSDIAFFLSGFHSANVSGCGEIIEEF
                     EDNIPNLKWTFPQISCQTKAVYDEFDRGIFDFQKNNNQAQIYKKLSTKELLQNFKNKE
                     LNDLFTPCATLYPKMKSYLQEDFFLSGSGSSVFKVDR"
     gene            9661..10113
                     /gene="smpB"
                     /locus_tag="RJ266_001090"
     CDS             9661..10113
                     /gene="smpB"
                     /locus_tag="RJ266_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HDV7354842.1"
                     /translation="MKIIARNKKALFDYSIIERFEAGIVLKGSEVVALRAGRANLKDS
                     FVRIIKNEIFLLNSHISLLHTTHSFYKHEERGARKLLMHRKQIDKLLGKVSIEGYTIV
                     ALDLYFNTKNKVKATLALAKGKNLHDKRETLKKKQADLEARAAMKNYK"
     gene            10124..10726
                     /locus_tag="RJ266_001091"
     CDS             10124..10726
                     /locus_tag="RJ266_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDV7354843.1"
                     /translation="MKKISALFLISLAFFLNACSKEEEIQNDFMFEEYHKGDKIVLNS
                     VNGGSKTLIRTDKGFVVEGEEGKVLMFDFFGTFCTPCKEEALDLSKLWKNNSSKFIII
                     GLTHFEDVSDETVKKFAGDYGAYYFLSNGSSNDRIIAQILKDIDYQNMEQLPFKVVLK
                     NGIYQKISDYWNNNTPTNFYLGKIPTELMQEDLNKIYKGK"
     gene            10726..11016
                     /locus_tag="RJ266_001092"
     CDS             10726..11016
                     /locus_tag="RJ266_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adaptor ClpS"
                     /protein_id="HDV7354844.1"
                     /translation="MPKTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQN
                     LEKASQTMLEIHHNGSGICGIYTQEIALSKQKKVMDAAKLANFPLQAKVEEE"
     gene            11013..13142
                     /locus_tag="RJ266_001093"
     CDS             11013..13142
                     /locus_tag="RJ266_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDV7354845.1"
                     /translation="MKYQENLQKYLDNAKNLSLINHHEFVTCEHVLFALLKLSTDFKD
                     IFEEFSDGDLELLETELKNYISQNNQVIKQEIEPTISVVLDEILLSSKNKNNEIKIID
                     FLEKLIQDSRSYSSYLLKKHNINLNKIQELQNHENIQNLNNHTSDLTLLAQNGKIDPL
                     IGRKFELERMMQILSRRKKNNPILVGEAGVGKTAIVEGLALAIAEKKVPKNLQNAKIF
                     SLDMASILAGTKYRGDFEKRIKEILSELEKIPNAILFIDEIHTIVGAGSTGESHTDFS
                     NLLKPALSNGTLKCIGATTFMEYKNTFDKNKPLSRRFAKINVDEPSQEESLQILKGLK
                     NKYEEFHHIKLNDEILQYAVIWGKKFFNDKFLPDSAIDLIDELGASFALNPRAKKNAN
                     LKDLENVLAKMTHHHKMFEFDQNKALMNLKTNLKAKIFGQDEVIDSLVSSLKQSFAGF
                     KNSNTPRGVFLFTGSSGVGKTELCKALAEFLGLNLERFDMSEYAEKHAISKLIGSPAG
                     YIGFEEGGLLSNAIRKNPFSLVLFDEIEKAHPDLSNTFLQIFDNAELTDNSGLKVDFK
                     NTIIIMTSNLGLKESNELGFLSKNEEKSNRAIKDFFAPEFINRIDKILHFNDLNDAIL
                     VKIIEKELDEISKNLNNIKLSVDDKAKIYLAKKAYNKEFGVRLLKRIISEEIGEKISD
                     EILFGKLKKGGIAKIKLGKNEKLEFIF"
     gene            13117..13764
                     /locus_tag="RJ266_001094"
     CDS             13117..13764
                     /locus_tag="RJ266_001094"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HDV7354846.1"
                     /translation="MKSSNLYSKLLNAPKNAPVFLSQNLEADFIVKAYTFGLFPWTSK
                     PVTWWCPDPRCILIPNQIHIQKNMKKFINLYQIKLDYDFLKLITLCRDTRSQSWIDDE
                     FITTYYKLFTQGYAHSLELYENNELIGGIYGLILGKVFFGESMVSIKKNASKVAMIKL
                     CDLLKPYDFIIDCQVYNQHLEFMGAHNISRKEFLNILKEKCNQESGFKNFKDLIT"
     gene            complement(13786..15074)
                     /gene="cetZ"
                     /locus_tag="RJ266_001095"
                     /pseudo
     CDS             complement(13786..15074)
                     /gene="cetZ"
                     /locus_tag="RJ266_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344503.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="energy taxis response protein CetZ"
     gene            complement(15155..15781)
                     /locus_tag="RJ266_001096"
     CDS             complement(15155..15781)
                     /locus_tag="RJ266_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HDV7354847.1"
                     /translation="MGSELYLMFFAAITLLAILNPFGNLTQFLAMSDGLPLMLRKKLF
                     RTILYTAFTIVLVFLLSGPLFMNYIFRVSLDDLRVSGGLVLIIMAIKNLLFSTKIATK
                     DFSPYQDMDDKEILRQSLIPMAFPMLVGPGTLASVIVIAEDGGLDVALGGVMIAFIFM
                     FILFHFAATIEKIVGKLILHVFSRIAQVFIVAMGFKMIIVGLKDIFNL"
     gene            complement(15796..16155)
                     /locus_tag="RJ266_001097"
     CDS             complement(15796..16155)
                     /locus_tag="RJ266_001097"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine-R-sulfoxide reductase"
                     /protein_id="HDV7354848.1"
                     /translation="MKELNEEEKKVILNKGTEAPFSGKYNDFYEKGIYQCKQCGASLY
                     KSEDKFKSGCGWPSFDDEIKGAVKRIPDKDGIRTEIVCANCNGHLGHVFEGEGFSAKN
                     VRHCVNSISLEFVKTKD"
BASE COUNT         6046 a         2472 c         2369 g         5277 t
ORIGIN      
        1 aatattttga cttagagggg tttttacccc aaagctaaat taatttagct tccttcctaa
       61 cttttatatt tatgagggat attgaaaaat atccctctaa gtcaaaaatt aatataactt
      121 tattaattct ttataattat acaagccttg tttaagcttg tataatattg ttaatttttt
      181 aaagtagctt tttaaactgt tctagagcat caagtttttc ccaaggatag tccttttgtc
      241 ctacttgccc acgagctgct acatccgcat aaagaaaagt ttctttactt ggtttatcca
      301 gatgaaattt atcacggatc caatttggcg ttaaagagaa attttgcatt acaaaatcac
      361 ttaaaacatc gtcatttaca ctggtatttg tgcccataca atccacgctt accgaagtag
      421 gttttgcaac acctatagca taactaagtt gaactataca ttttttagca agccctgctg
      481 caactatgtt tttagctaac catctacctg cataaagtcc acttctatca actttagtat
      541 aatctttgct cgattgcgca ccaccaccta ttggagaata acctccaaaa ctatctacta
      601 taagttttct tcctgttaaa ccactatcat gtaaagaaga atgattaaca tatttaccag
      661 ttggattgat taaaattcta gtcttattag gatcaaaaag ttcttttggt aaattactat
      721 ctaagataag tttcatcact aaagatctta aatcttctat tttcatactt tcaacacaag
      781 gtgcagaaac tactatagta tgaatacttt gcggtttgca attttcaaaa ttcgccttag
      841 tgccataatc tatagtcact tgagttttaa tatccactcc aagttcatgt ggatttgctt
      901 ttgcataagc ataaactcta tcacatagca ttcttgcata actaatagct gctggcatat
      961 attcctcagc ttcacaactt gcaaaaccaa acataatgcc ttgatcacct gctcctgttt
     1021 cgccatcttc ttgatcgaca ccttggttga tatcagggct ttgttcattt aaaaacacca
     1081 taacatcaac ctcatcagga tgtaaacact gctctttgct aaaatggcct gctccgtcat
     1141 aaccaatgtt ttttaaaaca tctttaacta aattatcgta atcagcttta ctaagtttgt
     1201 gatttgactt aacttcgcct cctatcacaa ccttatttcc tgcgacaaaa acctcactcg
     1261 ccacccttga atttttgtca tttttcaaga gtatatccac tatcgtatca gcgattatat
     1321 cagcgcactt gtctggatga cctgcactta cgacttctga agtgaataga tacataaaaa
     1381 gtcctttcat ttaaaatgaa ccacaattgt atccaaataa acttatcaaa gcttgataaa
     1441 ttaaaaattc tctaaaatta agcaaaagtt agttaaaatc aacttttgat ataaaaaata
     1501 tttaataagg tttttatgtt ttctaaaatc attcaaagct acgctaaagg caacctcata
     1561 gttcaaattt gcataggtat agcactagga atacttatag gcattagctc taaagaaata
     1621 tctgaaattg caaatttact tggaatactt tttacaagtg ccttaaaagc tatcgctcct
     1681 atgcttgttt ttattttaat tttaacctca atttgcacta aagatttttc tcaaagtggt
     1741 gctaagatca aaaatattat cattttatat atagtaggca ccttttttgc ttcagcttgt
     1801 gcagttcttg ctaatttttt cttccctgta aagcttgttt tagatggagt tcaaactgct
     1861 acaaactcat ctccaaccca catgagtgat attttcaaag atcttttatt taaaattgtc
     1921 gataatccca taaatgctct ttcaagcgga aattatttag gaattttaac ttgggcaata
     1981 gctggaggta tagcattaaa acactgttct aacgaagcaa aacaagtttt tatagatatc
     2041 aatgaagggg ttttaaaaat cgttaaattt gtagtaaaac ttgccccttt tggaattttt
     2101 ggacttgtgg ctaattctgt agcacaaaca ggagcacaag gtttgctaag ctatgtaaaa
     2161 cttttaattt tacttgtagc tactatgctt tttgttactt ttgttatcaa tgccttaata
     2221 gtcttttttt atacaagaaa aaatcctttt cctttaattt ttatctgctt aaggcacagt
     2281 gcattttttg ccttttttac aagaagttca gcggcaaata ttcctgtaaa tatggcactt
     2341 tgcgctaaac ttggcataga taaagaattt tatggcattt ctataccttt aggagctact
     2401 atcaacatgg caggagcagc agttactata gctattttaa gtcttactgc agccaatacc
     2461 gttggtatag aaatcagtct tttacaagcc tttttattaa gcattattgc cacctttgca
     2521 gcttgtgggg ctagcggagt tgcgggcgga tctttactgc ttataccttt ggcttgttct
     2581 ttatttaata tagactatga tattgctatg aaggtagttg ccataggttt tattataggg
     2641 gttattcaag atagtgttga aactgcttta aatagttcta cagatgttct ttttacagca
     2701 atttgttcta aaaatgaatt aaattacaat atcaaataag gtaaaaacat gcgtcatctc
     2761 atcactacaa aggattttaa taaagtcgaa attatggagc tttttaaaga agcaagtgat
     2821 ttcttagatg aaaaacctag aacttttctt aaaggaaaaa gtatcacgac aatttttttt
     2881 gaaaactcta cacgcaccct ttcatctttt gaaagcgctg caagaagatt aggtgctagg
     2941 gttttacgcc ttgatatttc aagatcaagc tctagcaaag gagaaactct ttatgatact
     3001 gctgctaatt tagatgccat gagtcctaat gctattgttg taagacacgc aaactcagga
     3061 gttcctttga tattagcaaa gcatatgcat tgtccagttg ttaatggagg agatggaaaa
     3121 cacgcccatc ctacccaagc tttgctagat ttattcacta tttataatca ttttcaaggc
     3181 gatgtcgaag gtaagaaaat ttgcatcgta ggtgatatca aaaattcccg cgttgcagcg
     3241 tccaatatag aacttttaag cagatttaat cttgatatta ccctagtagc tccaccacat
     3301 tttatgccta atacccatct taaaaaacat tataagcttg atgagaatat catagcaaat
     3361 tcagatatta tcatgagtct tagaacacaa acagaaagac ataataaaac cgtttatgct
     3421 tcacttaaag actatgcaaa tgatttttgc attcaaaaaa gcttagtaaa agataaaaag
     3481 cttattttac tacatccagg ccctgtaaat cgcaatattg acataagcga tgaaatgatg
     3541 agcgatgaaa ggactttagt tttaaaacaa gttaaaaatg gagtggccat tagaatggct
     3601 gttcttaaaa aactcatatt agaaaatgaa ggataaaaaa tgttagaatg ggatttaagt
     3661 gctttatttc acgataaaga agcgttgcaa aattttacac aagatcaaat ccaacaaagt
     3721 ttaaatttca aaaaaaacta tgaaaataaa ctttatacat taaatgctaa tgagttttta
     3781 caagctttaa aagattatga aattttaaat caagctcttg gcaaaatcat gacttatact
     3841 tatttgcttt ttgctaaaaa cactcaaaat ggttcttttt acgcacaata cgaagaagaa
     3901 tgcaaaaaaa tagaagaaaa tttactcttt ttcgagcttg aattttgcga gttagctcct
     3961 gagaaaagtc aaaaatttac aactttttgc aaagattatg atttttatct ttctaattta
     4021 ttgcaaaaca aacgctataa tcttagcaaa aacgaagaac gcattatgct ctatctttcc
     4081 aatacaggtg caaatgcttt tagtagactt tttgatgaaa gtatgagcgc tttaaaaatc
     4141 ccttttgaag gtaaaaaact tagcgaagaa gaagttctaa gcaaaatgta tgatgaagat
     4201 agaaaaatac gcaaaaaagc tgctaaaaaa ttcagtaaag ttttgcaaaa aaatagcaga
     4261 cttttaagtt ttattatcaa tatgataaaa acagaaagaa aaaacataag cttattaaga
     4321 ggttatgaaa atgctgaaat ttcaagacat atcagcaatc aaatttcaca aaaaagcgtt
     4381 gattctttga tagcaagtgc acaaaaacat tttaacttag tatcgcaatt ttacaaaaga
     4441 aaaaaacaaa ttttaggcta tgatgagctt aaagactatg acagatatgc acccatagga
     4501 aaagaagcaa gttttgattt taaaacaagt aaaaatattg ttttagaggc atttcaagct
     4561 ttttctcctc aattttatga tatagcaaaa aatgcttttg atcaaggttg gattgatgtt
     4621 tatccgcaag aaaataaaca agggggtgct ttttcgcatt ctgcaacttc tgatgcacat
     4681 ccttttgttt tattaaacta caccaataaa agacgcgatc tttttacact tgcacatgaa
     4741 ttaggacaca ctatccatca aaaactttct tataatgtaa gctatttaaa tcaaaacacg
     4801 cctttaacca ccgcagaaac agcttcagtt tttgccgaaa tgctcgtatt tgattttatt
     4861 aaagataagt taaaaaaaga agaactctta tctttatatg caaataaaat cgaagatatt
     4921 tttgcaactt tttatagaca gattaatttt acttgttttg aaagacgctt acatgctcaa
     4981 gaaaatgaac ttagcaccga agaaatcaat aaaatttgga tggaagaatc tcaaaagatg
     5041 tttcaagaca gcgtaaaact tacaaaaaat tatgcttctt ggtggagtta tattcctcat
     5101 tttatccatt ctcctttcta ctgctatgct tatgcttatg cacaactttt agttttagct
     5161 ctttatggac tttacaaaag taaaaaatgt gaaaatttta aagaacttta tatcaaaatg
     5221 ctttctttag gcggaagtgt gagtccaaaa gaactagtag gaatgtttgg ctttgatata
     5281 gaagatgaaa atttttggga aataggcata aaagaaattc aaaaactcat caatgaattt
     5341 atggagttac aatcatgcta gaaaaaattt taaaaaatga aaattttatc cataccatgc
     5401 aaaagcattg ccatgagatt atttcacatc ttatagaaga aaatatagaa ttttcaatag
     5461 ttgcaaatac aaatttcata gattttaatc ctgaacttcc caaagagctt gatgttaaac
     5521 aaaatcctta tgctcttttt gctcttggag gatacacctt tgaatccata caactaaata
     5581 aagatttcat tcaatttcac gcaggttttg gcaatgatga ttttgatagt tttgtaaagg
     5641 ttgatttagg agctatcacg caaattcaaa tagaaaatag cattttattt gttaatttta
     5701 gcctttataa acgcgaagat agcaaaaatt tacaaaaatc gaaaaatata tttttaaata
     5761 atccaaaaaa taaagatatt ttcaaaaaat gaatctattt gaagatttaa atgatagtca
     5821 aaaacaagca gtaagccaca ttgatggagc tatgcttatc ctagcaggtg caggtagtgg
     5881 aaaaaccaaa actatcacca ctcgtcttgc ttatcttatc ggtgaagtag gcatcccctc
     5941 gtataacact cttactctta cttttacaaa taaagcagct agtgttatgc gtcatagagc
     6001 attaaatttt ctacaaggca atcacaatcc tttgctttgc acctttcata aatttggact
     6061 tttattttta aaactccatt ttgaaagatt ggagcgtaaa aatagtttta ttgttatcga
     6121 tacagatgat acaaaaaaaa taattaaaga cttaatccat gataaaaaca aagataatgt
     6181 ctatgatatt atcaaataca tatcttattg caaaaatgaa ggcaaaagag taagcaatgt
     6241 ctttgaagat ttaaatttac taaaagaaca taattttgaa aaatatcaaa atgaatacaa
     6301 atttgccaac tattaccgtg cttatgaaga atacttatta aaacaaaatt ttgtagattt
     6361 tgatgatctt ttattgctaa gcaatctcat tttagaaaat gatataaatt ttgccaaaga
     6421 acaaagctta ctttataatt acattacagt tgatgagtat caagatacca ataccttgca
     6481 atataaaatt ctaaaaaatc tatgttgcat gcatgaaaat atcacagttg ttggtgatga
     6541 tgatcaaagt atttatagtt ggcgtggagc aaaaattgaa aatattttaa attttcaaaa
     6601 cgattttaaa aatgttaaac ttgtaaaact tgaacaaaat tatcgttcag tagggactat
     6661 tttacaagca gcaaataatc tcatatctca caatgaacaa cgacttggaa aaactttaat
     6721 ctgcactaaa gatactgggg aaaatattaa aatattaaaa aacgaaaacg aaaaagatga
     6781 aggtttatat atcgctcaag aagtaaaaaa attgctaaat tctggagtag aagctaaaga
     6841 gatcgccgtt ttatttcgag ttaatgcact atcaagagca atagaagaag catttatgaa
     6901 ggaaaaaatt tcttataaac tgcttagtgg tatgcgtttt tatgaaagat tagaaataaa
     6961 agatttaatc tcgtatctta gacttatctt aaatccaaat gatgatttgt cgtttaggcg
     7021 cattattaat cgccccaaaa gatccatagg agaaaaaacc ctaaaaaatt tagaagaata
     7081 tgcaaaaaaa cgtcaaattt cactttttga tgccttatgt gaaagcgatg gtggtgtagg
     7141 aattttaaca acaaaaaaag cacaaaatga agcaaatatt tttatacaaa atattcacac
     7201 tctaaaaagc tacgataatg caaaaaaagt ttttgacaat atagaagaat tatttaaaat
     7261 caaagattat ttttcagagc aagatgatgg agatgaaaga atcagaaatc ttgatgagtt
     7321 ttatgctaat ctaagagaaa aactcaaaga agatcccgaa gcttctttag aagatctact
     7381 tagtgaaatt tctttattaa gtgatcaaga taatttagat gaagaatgtg tttgcttgat
     7441 gagtattcat gctagcaaag gtttggaatt tgattatgtt tttataatag gctttgatga
     7501 aggatttttt cctttaaata gcgaagaaaa tctcgaagaa gaacgccgtc ttgcttatgt
     7561 tgccatcact cgcgccaaga aatttctcac aataagtgtt gcaaattctc gtttttatca
     7621 tggttcaaga gcaaatatca atcctagtcg cttcttagaa gaaagtaaat taatcaatga
     7681 aaaatcaaaa aatcaaaata tacaaaaaac tagtttttgc aaaggagatc tagttaaaca
     7741 taaaattttt ggcattggca gggttgttga agttaataaa agcggaaaag aggaaaagct
     7801 taatattaat tttggtggca taatgcgtgt aatcatggca agctttgtgg aaaaagcagt
     7861 atgaacaaga tctttgcagc ctttaaacca aggggtttga gctctaatgc ctttttaagc
     7921 actttaaaga aaaaatataa aaataaaaaa gcaggatatt ctggcactct tgatcctttc
     7981 gccaaagggg ttttaatcgt tgcatttgga caatacacaa aacttttccg ttttttaaaa
     8041 aaaactccaa aaacctataa agctacttta tggcttggag tttactcttt aagtcttgat
     8101 gatcaaaata taaaagaaat tcaaaatata aaagaatttg atcttacaaa tttaaaacaa
     8161 atcattaatc aaatgcaagg aattatctcc tatacaccac cgcaatttag cgccaaaaga
     8221 atcaatggaa ctcgcgccta tgaacttgca aaaaaaggta tagaagtaaa tttaaaacct
     8281 tgtcaaatgg aagtatttga ttgcgagatt ttaagctata atcatccttt tttaaatatc
     8341 gaaatcacag tcagtgaagg tgcttatata agatcttatt gtgaactttt tgctagaaaa
     8401 ctaggtatta atgcgacttt aagctcttta gagcgcatta aagaaggtaa atttgtttat
     8461 aataatgaga aaagcttaaa tgtgttaaaa tacattgacc taaagccaaa ttttatcaag
     8521 gatttaaata aactagaaaa tggtgctaaa atttttgtcg aagaattaga atttcatgat
     8581 gaaggagatt attatattga aacagagaaa tattttagca taattaatat taaagaaaat
     8641 acagtaaaat atcttctaaa taaggttgaa aaatgttaat attatcaaga aaagaaaatg
     8701 aaagtataat tatcggagaa ggtatagaaa tcaaagtcgt tcaaacaggg aaaggatatg
     8761 ccaaaatagg catagaagct ccaaaatccc ttatgatact tagaaaagaa cttgttcaac
     8821 aagtaaagga tgaaaatttg cattctgttg ttcagaatga tattaaactt gatgacttaa
     8881 gcaaaaaact aatcaaatga aagcttacgc taaagcaaat atttttttaa aacttaccgg
     8941 ttttgactca agaaaatatc atcttttaga atcacgattt atacttttaa aagatgtttt
     9001 tgatgagctt gagcttattg ataaagaatc agattctaaa aaagaatttg aaatcattag
     9061 taattttaaa tgcgaaaata atattattca aaaggcttat ttgctacttt ctagaagata
     9121 taataacgaa ttaaaagaat tatttagcaa aaaaagccta aaactcacaa aaaatatccc
     9181 agtatgtgct ggacttggcg gtggaagtag cgattgtgcg agttttttac tactaatgaa
     9241 tgaaacccta aatttaaaat taaacctgca agaacttata aatttaagca tgcaactagg
     9301 aagtgatatt gccttttttt taagtggctt tcactctgct aatgtaagtg gctgtggcga
     9361 aattatagaa gaatttgaag ataacatacc taatttaaaa tggacttttc cacaaatatc
     9421 ttgccaaact aaagctgttt atgatgaatt tgatagagga atatttgact ttcaaaaaaa
     9481 caataatcaa gcgcaaatct acaaaaaact cagcacaaaa gagttgttac aaaactttaa
     9541 aaacaaagaa ttaaatgatt tatttactcc ttgtgcaact ttatatccta aaatgaagtc
     9601 ttacttgcaa gaagattttt ttctaagcgg tagcggtagt agtgttttta aggttgatcg
     9661 atgaaaatta ttgcgagaaa taaaaaagct ttatttgatt atagcatcat agaacgcttt
     9721 gaagccggaa ttgtccttaa aggaagtgaa gttgtagcct taagagcagg aagagcaaat
     9781 cttaaagact cttttgttcg cattataaaa aatgagattt ttttacttaa ttctcatatt
     9841 tcattgcttc atactacaca ttctttctat aaacacgaag aaagaggtgc tagaaagctt
     9901 ttaatgcata gaaagcaaat tgataaatta ttaggtaaag taagtataga aggatatact
     9961 atcgttgcat tagatcttta ttttaacaca aaaaataaag taaaagctac ccttgcttta
    10021 gctaaaggga aaaatttgca cgacaagcgt gaaactttaa agaaaaagca agccgattta
    10081 gaagctagag ctgctatgaa aaattacaaa taaaggaaaa taaatgaaaa aaatttcagc
    10141 cctattttta ataagtttag cattttttct taatgcttgc tccaaggaag aagaaattca
    10201 aaatgatttt atgtttgaag agtatcacaa aggagataaa atagtcttaa atagtgtaaa
    10261 tggtggaagc aaaactttaa taagaacaga taaaggtttt gtggtggaag gagaggaagg
    10321 aaaagttcta atgtttgatt tttttggcac tttttgcacc ccatgtaaag aagaagcttt
    10381 agatcttagc aaactttgga aaaataattc tagcaaattt atcattatag gacttacaca
    10441 ttttgaagat gttagcgatg aaacagttaa aaaattcgcg ggtgattatg gtgcttacta
    10501 ttttctaagc aatggcagct ctaatgatcg tattattgct caaattttaa aagatataga
    10561 ctatcaaaat atggagcaac ttccttttaa agttgtttta aaaaatggaa tttatcaaaa
    10621 aataagcgat tactggaata ataatactcc aacaaatttt tatcttggta aaattccaac
    10681 agaactcatg caagaagatt taaataaaat ctacaaagga aaataatgcc aaaaacccaa
    10741 actctagagc aaacaaaact tagtgaacca aaaatgtata aagttatact cttaaatgat
    10801 gatgtaacaa ccatggattt tgtcatagaa attttgatga atatttttca tcaaaacctt
    10861 gagaaagcaa gtcaaacaat gttagaaatt catcacaatg gttctggaat ttgtggcatt
    10921 tacacccagg aaatagctct ttcaaaacaa aaaaaagtta tggatgcggc taaacttgct
    10981 aattttccac tacaagcaaa ggtggaagaa gaatgaaata ccaagaaaat ttacaaaaat
    11041 atcttgataa tgccaaaaat ctaagcttaa taaatcacca tgaatttgtt acctgtgagc
    11101 atgtactgtt tgcattacta aaactaagca ctgattttaa ggatatattt gaagaatttt
    11161 cagatggaga tcttgaactt ctagaaactg aattaaaaaa ttacatttct caaaacaatc
    11221 aagttattaa acaagaaata gaacctacaa tatctgttgt tttagatgaa atcttacttt
    11281 catctaaaaa taaaaataat gaaattaaaa ttatagattt tttagaaaag ctcatacagg
    11341 attcaagaag ttattctagc tatctcttaa aaaaacacaa cataaatctt aacaaaattc
    11401 aagaacttca aaatcatgaa aatatacaaa atttaaacaa ccacacaagt gatttaacac
    11461 ttttagctca aaatggcaaa attgatcctt taataggaag aaaatttgaa cttgaaagaa
    11521 tgatgcaaat tctttcacgt cgcaagaaaa ataatcctat tttagtagga gaagcaggag
    11581 ttggaaaaac agccattgta gagggattag cattggctat tgcggaaaaa aaggtgccta
    11641 aaaacttaca aaatgcaaaa atttttagtc ttgatatggc tagtatactt gcgggaacaa
    11701 aataccgtgg agattttgag aaaagaatta aagaaatttt aagtgaactt gagaaaatac
    11761 ccaatgctat tttatttatt gatgaaattc acactatagt aggagctgga agcacaggag
    11821 aatctcatac tgatttttcc aatcttttaa aaccagctct aagcaatgga actttaaaat
    11881 gcataggtgc aacaactttt atggaatata aaaatacttt tgataaaaat aaacccctaa
    11941 gtcgccgttt tgctaaaata aatgtagatg aaccaagcca agaagaaagc ttgcaaattc
    12001 ttaaaggatt aaaaaacaaa tatgaagaat ttcatcatat caaattaaac gatgaaattc
    12061 ttcaatatgc tgtaatttgg ggtaaaaaat tttttaatga taaattttta cctgatagcg
    12121 ctatagatct gatcgatgaa cttggcgctt cttttgcttt aaatccaaga gctaaaaaaa
    12181 atgccaattt aaaagattta gaaaatgttt tagcaaaaat gacccaccat cacaaaatgt
    12241 ttgaattcga tcaaaataaa gctttaatga acttaaaaac aaatttaaaa gcaaaaattt
    12301 ttggccaaga tgaagttata gatagccttg tttcatcact taagcaaagt ttcgcaggat
    12361 ttaaaaattc caatacacca cgcggagtgt ttttgtttac tggatcaagt ggagttggaa
    12421 aaacagaact ttgcaaagct ttagctgaat ttttaggttt aaatttagaa cgctttgata
    12481 tgagtgaata tgcagaaaaa catgctataa gtaaactaat aggatctcca gctggatata
    12541 taggttttga agagggtgga cttttaagca atgctattcg caaaaatcct ttcagtcttg
    12601 ttctttttga cgaaatagaa aaggctcatc ctgatttaag caataccttt ttacagattt
    12661 ttgacaatgc tgaactcacc gacaatagtg gtcttaaagt agattttaaa aatacaatca
    12721 ttattatgac atctaatcta ggacttaaag aaagcaatga gcttggtttt ttaagtaaaa
    12781 atgaagaaaa aagtaatcgt gctatcaaag acttttttgc tccagaattt attaatcgca
    12841 ttgataaaat tttacatttt aatgatttaa acgatgctat acttgttaaa attatcgaaa
    12901 aagaacttga cgaaatttct aaaaatttaa ataatataaa attatcagtg gatgataaag
    12961 ctaaaattta tttagctaaa aaagcctata ataaagaatt tggagtaagg cttttaaaac
    13021 gcataatttc tgaggaaata ggagaaaaaa tcagtgatga aattttattt ggaaagctta
    13081 aaaaaggtgg tatagctaaa atcaaacttg gtaaaaatga aaagctcgaa tttatattct
    13141 aaattactca atgcgcctaa aaatgctcct gtatttttaa gtcaaaattt agaagctgat
    13201 tttattgtaa aagcttatac ttttggtcta ttcccatgga caagtaaacc tgtaacttgg
    13261 tggtgtccag atcctagatg cattttaatt ccaaatcaaa ttcacatcca aaaaaatatg
    13321 aaaaaattta ttaatctcta tcaaattaaa cttgattatg attttttaaa attaattaca
    13381 ttatgtcgcg atacacgctc tcaaagctgg atagatgatg aatttattac cacttattat
    13441 aagttattta cccaaggcta tgcgcatagc cttgaacttt atgaaaataa tgaacttata
    13501 ggtggaattt atggtttaat tttaggcaag gttttctttg gtgaaagcat ggtaagcatt
    13561 aaaaaaaatg catctaaagt tgccatgatt aaactttgtg atttattaaa accttatgat
    13621 tttatcatag attgtcaagt ttataaccaa catttagaat ttatgggtgc tcataatatt
    13681 tctaggaaag aatttttaaa tattttaaaa gaaaaatgca atcaagaaag tggttttaaa
    13741 aattttaaag atttaattac ttaaaaataa gcgtgaaaat cacgcttatg acatcgcttt
    13801 agcaacttca gcagagcttt cacgaatttt ctccatacac tctcttgctt cttttgcaag
    13861 ttcaacactc tgattaacat cctctaaacc gcttttaata ctctcaacca cttgtgatgt
    13921 aacattgcga atagaattaa tcgtagtggt aatttcatta accgaatgcc ctgttctttc
    13981 agctaaattt cttacttcat cagcaacaac agcaaaacct ctaccatgtt caccagcacg
    14041 tgctgcctca atagcagcat ttaaagcaag cagattagtc tgatcagcaa tatcactaat
    14101 agtttgaata atagatttaa tttcatctga ttgttgattt aaagaggaaa caagatttga
    14161 actttgagac atcatatcag caatattctg aacatttgaa acagtgtttt caattacacg
    14221 atctccatct tgagtaagat tatcattttt ttctgcaagt tcgcttatga gacgaagttt
    14281 ttcttgatct tttttaactt gttcgcttat atctgtagca aatttaataa ccttgtaaat
    14341 ttttccatca tcatttttaa ccggattata acttgcttca aggtatactt ttttattatt
    14401 tcttccgtat cttatatatt tacctgattg aaatttaccc tctcttaaat cttcccaaaa
    14461 ttgaacatag tccttagagt gtctataatt agaatcacag aacatactat gatgctttcc
    14521 tttaatctca tcaatattaa aatccatagc tcttaaaaaa ttttcattag ccgtaataat
    14581 agtcccatca ggtttaaatt caataatagc catagaacga ttagcagcag caatagtatt
    14641 tctaagatca agcatttcat aatgtctttg agttatatca ttggcaaatt taataatttt
    14701 ataaacataa ccattattat cactaattgg aagataattt gcttctaaat aaacatctat
    14761 ccctccctta gctatacgtc taaaaagacc acttctagct tttccatctc ttaaatcttt
    14821 ccaaaaatca ctatatgctg aagaattaac aacttcaggc aaacaaaaca tactatgatg
    14881 cttacccttg atctctgaaa gggagtattt catagttgtt aaaaaatttt gatttgcctc
    14941 taaaataacg ccatcggtag taaattcaat taccgccatg gtattcccaa tagatcttaa
    15001 aatatctcct aaaccattac atttttttca agttgttcaa ttattttagt attatttttc
    15061 ttagcaccaa acataaaact caccttttta ataataaatt attttaaaat tatatcatat
    15121 ttatatagta ttatttactt aaaattatat taatttataa gttaaatata tcctttaaac
    15181 ctacaataat catcttaaac cccatagcaa caataaatac ttgtgctata cgagaaaaaa
    15241 catgtaaaat caattttcca actatttttt ctatagtagc tgcaaaatga aaaagtataa
    15301 acataaaaat aaaagctatc attactccgc caagagcaac atcaagccca ccatcttcgg
    15361 ctataacaat aacgctagct aaagttccag gcccaacaag cataggaaat gccataggta
    15421 ttaaactctg tcttaaaatt tccttatcat ccatatcttg ataaggacta aaatccttag
    15481 ttgcaatttt tgttgaaaaa agtaaatttt taatagccat tataataaga accaaaccac
    15541 cagaaaccct taaatcatcc aatgaaactc taaaaatata gttcataaat aaaggtcctg
    15601 ataataaaaa caccaaaact atagtaaaag ctgtatagag aatagttcta aaaagttttt
    15661 ttcgaagcat taaaggcaat ccatcactca tagccaaaaa ttgagttaaa ttaccaaaag
    15721 gatttaatat agcaagtaaa gtaattgcag caaaaaacat caaataaagc tcagaaccca
    15781 tactagaaaa cactatcaat ccttagtttt tacaaattcc aaagaaatag aatttacaca
    15841 atgtcttaca tttttagcag aaaatccttc tccttcaaaa acatgaccta aatgtccatt
    15901 gcaatttgca catacaatct cggttctaat cccatcttta tcaggaattc ttttaacagc
    15961 cccttttatt tcatcatcaa agctaggcca tccacaacct gatttaaatt tatcttcgga
    16021 tttataaagc gaagctccac attgtttgca ttgatagatt cccttttcat aaaaatcatt
    16081 atatttccca ctaaaaggag cttctgttcc tttatttaaa attacttttt tttcttcttc
    16141 atttaattct ttcatgatct accc
//
LOCUS       DAPIWB010000041        16003 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.042, whole genome shotgun sequence.
ACCESSION   DAPIWB010000041 DAPIWB010000000
VERSION     DAPIWB010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16003)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16003)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16003
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.042"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            72..2057
                     /locus_tag="RJ266_001098"
     CDS             72..2057
                     /locus_tag="RJ266_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family iron permease"
                     /protein_id="HDV7354849.1"
                     /translation="MLKQSIETYKKGDNLGAKKLSEDAYFQHFENMEGSIGRNIGRKA
                     ITMERKFLNLRRMYKDEAPLTQINALIDSLYYDLDEVTPILQNGYRLKAEASDINYDK
                     AKAEKSSLEANAKREADAEALIAQMMGVDKKDLAQSSLTTQAPIPVNNDTSKLIDDNA
                     STDLQAAAAMDVRLQFILDNISTKFSQAANAFKEKNYQTSKDFLNDALFSDYRNTKVE
                     ILVNKFTKAGNDQKIQQAIRTLIRQINDAKIDEKGLRDGLDNIEEQIFDVFLQIPNSE
                     LSSLQISGFNDETKGKDYAKVSNDIKLALDEILKNYDGFSTSMVDDLQGIYLDIFEAS
                     GMENKIGAVDSGLKLKIESLFSKGMALIKASADKKELEATFNDLEQLIASSVDKIQDS
                     TPYSLFIWALGIILREGLEALIIIVAIVSYLVQSGNKNRLNIAYSALFTGVILSFITA
                     FGVSWLFKENAGQSRELIEGITMLIAVLLLFYVGFWLLSNAQNKKWTSFIKQGAIDAI
                     SNNSAKTLWITVFLAVYREGAETVLFYQALLFDSKTSTDFGAVFGGLGLGILILIVLY
                     FLLKAGAIRIPVKQFFYITSYIIFYMVFVFTGKGIAELIEGKVIIPSLIPMNFEPILW
                     LGIYPYYETLIPQFIVLTMLIIGILITKQISKKGVKS"
     gene            2054..2593
                     /locus_tag="RJ266_001099"
     CDS             2054..2593
                     /locus_tag="RJ266_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron transporter"
                     /protein_id="HDV7354850.1"
                     /translation="MIKKVLSVVAAAAVISTNLFAGEVPIGDPKELNGMEIAAVYLQP
                     IEMEPRGIDLAASLADIHLEADIHALKNNPNGFPEGFWMPYLTIAYELKNTDTGAIKR
                     GTLMPMVADDGPHYGANIAMEKDKKGGFGVGNYELTFYISNPEKQGFGRHVDEETGVG
                     KWFEPFKVDYKFKYTGTPK"
     gene            2676..4079
                     /locus_tag="RJ266_001100"
     CDS             2676..4079
                     /locus_tag="RJ266_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2318 domain-containing protein"
                     /protein_id="HDV7354851.1"
                     /translation="MSIYFVHFLISVLPLSILMAFITPDKKYIFKSFLVVFLGFLFGY
                     FAFFIAAQFLKTENLIFNFDFVFIGLLLVSFIFYFWKKIEILNFILLGILSFCTALHY
                     YFLSQDFPIFTSSLIDSEGISSLGFIALALLVCILIFFFLKWQKNFNQKTSFMLFLLL
                     ILIESDKALANILLTLMRNSIIETHTFLVSFVGKSNYFGVFGIYVYLIFIAFLAFLSL
                     KIRKKNISKKQILDINYRKNEAKTSLINRYFSSVFISCVISFCIILYFFMVSSKPLTI
                     DEPKEILPDKNGKFIFDIALLRDNKLHRFAYISAEGKVIRFFLINKREDRDSPVAVFD
                     ACMICGDMGYIKKDGQLICISCNVRIFLPSVGKSGGCNPIPLKYEYDGKKITIDVKDV
                     IAGSNYFSQIKEIEVQDPVSKTKIINTQAPFSYSYKGITYYFSNQNNYEEFKKDPTKY
                     VEENEAQFLIQRRNDVG"
     gene            4069..5358
                     /locus_tag="RJ266_001101"
     CDS             4069..5358
                     /locus_tag="RJ266_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7354852.1"
                     /translation="MLAKMIFNSIFKNKIQKFLAFLTCFLATLLLSTMLNITLSIGDE
                     VTKQLKSYGSNILVLPKGSSLSIEIGNELYEPLKNKNYLEEKNLYMIKDIYWRNNITA
                     LAPFLEGKITIENSQQKALIYGTYFQKAIKIKDDDDFITGIKSLYPYLAVQGEWAKDD
                     SNEIMLGEDFAKNNKLKLGDTIKLIGENNRSKEAKIVGILLHANPKMSNKIIAPLNLA
                     QDLLNKQGLYSSAEVRAFTIPESALSEKVRRMGEEKLDQLEYDKWYCSAYVGSIASQI
                     SDGLPGSDAKALNAISDAQSLVVKKIQSLMGITCIICLIVASIAISSLMSSEIHRRKK
                     EIGLLKVLGANTFQIYLIFASENLIVALFAALFGFIFGTALSQIISLSIFGYFIDIAF
                     VALPLSFIFAGLIALLGCLLPIKNITQLSAAGVLYGR"
     gene            5348..6466
                     /locus_tag="RJ266_001102"
     CDS             5348..6466
                     /locus_tag="RJ266_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HDV7354853.1"
                     /translation="MVDKFFLNELFKSISFSYQRLFIIVLSVFIGALTCSAFLNIYFD
                     IDIKLSKELKAYGANVMISPKQDENFISNAECEKVKENLKARALTPFLYDFLNLGSTS
                     GVVLGTDFRALKITKPFLEVKEGSFSLNDFDENSAFLGVNLAKQLGLKAGNELQIYNP
                     NNGKSTKLTIKGILSSNDEFDSIVLAPLSVVQNLSDRAGINYANAVVYGNFDEVKAKT
                     QAISNEFIDAKPISSVSLSEGLVLGKIKALMFLIILVVLIIVTTSVNTTLSSIIFSRK
                     KEIALRLALGAKKSEIFKLFASECFIVSFFASLIGAFCGIFLANVFGYLIFNSSIDFR
                     FIAVFIALIISLIFAFLAAFFPIKRALKINVCENLKGE"
     gene            6463..7116
                     /locus_tag="RJ266_001103"
     CDS             6463..7116
                     /locus_tag="RJ266_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7354854.1"
                     /translation="MMKKELIKINNLNKEFGKVKALNNINLSVYEGEWLAIMGPSGSG
                     KSTLLNILSLMDTPSSGEYILDNENLEQMDEEQKITLRREKIGLVFQQFHLIPYLNAL
                     ENVMLSQYYHSSVDEEDAKMVLEKVGLSHRLTHLPSQLSGGEQQRVCIARALINNPEL
                     LLADEPTGNLDEANEQIVLQTLQKLKNEGKTIVLITHNPDLAKFADRTLILQHGVLK"
     gene            7113..7601
                     /locus_tag="RJ266_001104"
     CDS             7113..7601
                     /locus_tag="RJ266_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDV7354855.1"
                     /translation="MKKSLLILSILFLLNACSFENSKDTGKVGEKSAEISAKDTLGKA
                     VKLADDNTSLKVLVFFQNGCPSCLKELPSLDEFIQNHPNKISVYAINSIDNANVVKVL
                     AEQFDFKNVKVLKDDLKITNDRYAVFATPTTIIIKDGMIKDRILGEKPWEFFESKLIS
                     LL"
     gene            7562..8065
                     /gene="traF"
                     /locus_tag="RJ266_001105"
     CDS             7562..8065
                     /gene="traF"
                     /locus_tag="RJ266_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraF"
                     /protein_id="HDV7354856.1"
                     /translation="MGIFRIQAYFFALIIALFFVACDSGENFKALNSDKTYNFAYNGF
                     EKSLKLNDKAQNFALVFFTKDCGVCKEQIPILQNLAKNYDFNIFVVLGDANDANDAKA
                     WADEKGLSNLAMFYEKRAAKYLSSAIGEIYGVPVLSFFKEGKMDEKFIGLTPYSILEK
                     EIKKVKS"
     gene            complement(8075..8512)
                     /locus_tag="RJ266_001106"
     CDS             complement(8075..8512)
                     /locus_tag="RJ266_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HDV7354857.1"
                     /translation="MKKTILTILFLLTLTQAKEIQIYESPTCGCCDLWADYMKAKGYE
                     VSVHKTNDFLKIKEKMGIKDEYQSCHTGVIEGYAIEGHVPESAIAWLLENKPKDVIGI
                     SAPGMPQGSPGMEQGYSEKYPVILMKKDGSYELYGYFIGDKKL"
     gene            complement(8811..9227)
                     /locus_tag="RJ266_001107"
     CDS             complement(8811..9227)
                     /locus_tag="RJ266_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354858.1"
                     /translation="MKKLGLVLAVLVALNVSAFADLIVINKKDLVPVSASEMQNKYFQ
                     ESIKSTLTEPLFKKATFYEADIVAKVDPRTYNSTQAIIQKEYSDKSNYVYYKQVLILT
                     SDGKRARLSTLSCEIASFDKKGYLCGGTADHNYSIK"
     gene            complement(9402..9486)
                     /locus_tag="RJ266_001108"
     tRNA            complement(9402..9486)
                     /locus_tag="RJ266_001108"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9450..9452),aa:Leu,seq:tag)
     gene            complement(9491..9567)
                     /locus_tag="RJ266_001109"
     tRNA            complement(9491..9567)
                     /locus_tag="RJ266_001109"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9531..9533),aa:Arg,seq:tct)
     gene            complement(9582..9658)
                     /locus_tag="RJ266_001110"
     tRNA            complement(9582..9658)
                     /locus_tag="RJ266_001110"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9622..9624),aa:Arg,seq:tcg)
     gene            complement(9662..9738)
                     /locus_tag="RJ266_001111"
     tRNA            complement(9662..9738)
                     /locus_tag="RJ266_001111"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9702..9704),aa:His,seq:gtg)
     gene            complement(9763..9840)
                     /locus_tag="RJ266_001112"
     tRNA            complement(9763..9840)
                     /locus_tag="RJ266_001112"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9803..9805),aa:Pro,seq:tgg)
     gene            complement(9883..10731)
                     /locus_tag="RJ266_001113"
     CDS             complement(9883..10731)
                     /locus_tag="RJ266_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HDV7354859.1"
                     /translation="MRFVFLICCACLVFANEILLLSKFDKQDFNSKDFNAYLMSEKLD
                     GVRGIWDGKYLKTRQNYKIKTPDFFTKNFPPFAIDGELWIARNKFDEISALIRSGDSN
                     LTLWKEVTYNIFDVPNACEEFQISTCTLKNRLAVLEEYLQKYPSAYIKIISQIPVENQ
                     NNLNQFYESIIKNQGEGIVIRKNLSPYEKGRSKNATKLKPYDDAECELVGFRKGKGKF
                     ENQVGALLCKMPNGQIIKIGSGLKDEDRKNPPKIGSIVTYKFNGLTKNSLPRFPVFLR
                     IRDENP"
     gene            complement(10731..11393)
                     /gene="cgpA"
                     /locus_tag="RJ266_001114"
     CDS             complement(10731..11393)
                     /gene="cgpA"
                     /locus_tag="RJ266_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoprotein CgpA"
                     /protein_id="HDV7354860.1"
                     /translation="MKTRILAIFFIFTSLLYADENPFKTDQNITLVAPPEFQKEEVKF
                     NSSARILKSITFNYINLDGSEDKIDLDVNKSIDWHDTYTISRFKSPDPSKVLDVSVTI
                     PEKNSSKQESNSTANVEIPLQVAKIYDFISYAVYKNKIKLNTSDEMITDFSVGNPSKI
                     VIDFRSKMISPTKNIRLSNSIFKRIDFGSHKGYYRLVIYLDGTYNYNIQKDATGYMIN
                     LL"
     gene            complement(11383..11586)
                     /locus_tag="RJ266_001115"
     CDS             complement(11383..11586)
                     /locus_tag="RJ266_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354861.1"
                     /translation="MIFWAFLVVIGAIYFGNMFFGQYSLDTLLSLENTKEELNKKIIL
                     LKEQNAKAQKDYFELKGLYPNEN"
     gene            complement(11652..12896)
                     /gene="eno"
                     /locus_tag="RJ266_001116"
     CDS             complement(11652..12896)
                     /gene="eno"
                     /locus_tag="RJ266_001116"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HDV7354862.1"
                     /translation="MLVIEDVRAYEVLDSRGNPTVKAEVTLSDGSVGAAIVPSGASTG
                     SKEALELRDNDERFGGKGVLKAVANVNETIADEILGLDAFNQTQLDDTLRELDGTNNY
                     SNLGANATLGVSMATARAAAAALGMPLYRYLGGANASILPVPMCNIINGGAHANNNVD
                     FQEFMIMPFGFTSFKEALRSVCEIYAILKKELANSGHSTALGDEGGFAPNLANNTEPI
                     DLLMTCIKKAGYENRVKIALDVASTEFFKDGKYHMEGKAFSSEALIERYVELCAKYPI
                     CSIEDGLAENDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKPN
                     QIGTITQTMRTVRLAQRNNYKCVMSHRSGESEDAFIADFAVALNTGQIKTGALARGER
                     TAKYNRLLEIEFESDEYLGEKL"
     gene            complement(12896..13927)
                     /gene="recA"
                     /locus_tag="RJ266_001117"
     CDS             complement(12896..13927)
                     /gene="recA"
                     /locus_tag="RJ266_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HDV7354863.1"
                     /translation="MDDNKRKSLDAALKSLDKTFGKGTILRLGDKEVEQIDSIGTGSV
                     GLDLALGIGGVPKGRIIEIYGPESSGKTTLTLHIIAECQKAGGVCAFIDAEHALDVKY
                     AKNLGVNTDDLYVSQPDFGEQALEIVETIARSGAVDLIVVDSVAALTPKAEIEGDMGD
                     QHVGLQARLMSQALRKLTGIVHKMNTTVIFINQIRMKIGAMGYGTPETTTGGNALKFY
                     ASVRLDVRKVATLKQNEEPIGNRVKVKVVKNKVAPPFRQAEFDVMFGEGLSREGELID
                     YGVKLDIVDKSGAWFSYKDKKLGQGRENSKAFLKENPEIADEITKAIQNSMGIEGMIS
                     GSEDDEGEE"
     gene            14033..14893
                     /locus_tag="RJ266_001118"
     CDS             14033..14893
                     /locus_tag="RJ266_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis family protein"
                     /protein_id="HDV7354864.1"
                     /translation="MKKITIAHSPDADDIFMYMAIKFGWIGNDFAYENTALDIQTLNE
                     FALKNEFDATAISFGLYPLIASEYALLRTAVSFGEGYGPKLIKKKDTHLKRNFKVALS
                     GANTTNALIFRMKYPEARIIYKNFLDIENAVLSGEVDAGVLIHESILNFDQSLYVEAE
                     LWDIWLEFAKENLPLPLGGMALRRSLPLSDAIKIERDLTNAVKIADANRKILAPMLME
                     RKLIRVDEEKLDTYLNLYANKNSISMNQTQLLAVDTLFKLGYDYKFYDKIIHVNDFLI
                     PSEYEEARNS"
     gene            14905..15174
                     /gene="fliQ"
                     /locus_tag="RJ266_001119"
     CDS             14905..15174
                     /gene="fliQ"
                     /locus_tag="RJ266_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HDV7354865.1"
                     /translation="MDESTLVALGVQTFKITLLLSLPMLLAGLIAGLVISIFQATTQI
                     NEMTLSFVPKIILVVVILIFLMPWMTTTMIDFTENILNQIPTFIK"
     gene            15171..15947
                     /locus_tag="RJ266_001120"
     CDS             15171..15947
                     /locus_tag="RJ266_001120"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HDV7354866.1"
                     /translation="MIIDFKKYSSVRIGNEFEVLVLDQICDFDGFLIGGANNLLVSPK
                     PKNIGILGDGFNFIQILDRNKDFIHLRIGCKTKSSKMYRFAKENNLKGFEYLSKIPGT
                     LGGLLKMNAGLKGECISQNLIKIATSQGEILRANINFDYRFCPLNTHFFWAEFKLKFG
                     FDTLKDEALKNARSNQPSGASFGSIFKNPKNDFAGRLIEAVGLKGFSKGDAMLSDKHA
                     NFLINKKNASFEDAFFLIELARKKVFEEFGTNLENEVIII"
BASE COUNT         5372 a         2617 c         2533 g         5481 t
ORIGIN      
        1 gtattttttt atcaagctca gcttttgcta gggtagatga ttatattaat gaagcaaatc
       61 ttatcaaaga tatgctaaaa caaagcatag aaacttataa aaagggcgat aatctaggag
      121 ccaaaaagct tagcgaagat gcgtattttc aacattttga aaatatggaa ggctcaatag
      181 gaagaaacat aggaagaaaa gctatcacta tggagcgtaa atttttaaat ttgcgtcgca
      241 tgtataaaga tgaagctcct ttgacacaaa ttaatgcttt aattgatagt ctttattatg
      301 atcttgatga agtaactccg attttacaaa atggatatcg tttaaaagca gaagcaagcg
      361 atataaacta tgataaggct aaagctgaaa aatcaagcct agaagccaat gccaaacgcg
      421 aagctgatgc agaagcttta atcgcacaaa tgatgggtgt agataaaaaa gatttagcac
      481 aaagctcttt aaccacccaa gctcctatac ctgtaaataa tgatacaagc aaacttatag
      541 atgataatgc aagcactgat ttacaagctg ccgctgcaat ggacgtaaga ttgcaattta
      601 tactagataa tatctctacc aaattttcac aggcagctaa tgcttttaaa gaaaaaaact
      661 accaaactag taaagatttt ttaaatgatg ccttatttag tgattatcgc aataccaaag
      721 tagaaatttt agtaaataaa tttaccaaag caggaaacga tcaaaaaatt caacaagcca
      781 tacgcaccct tatacgccaa atcaacgatg caaaaataga tgaaaaaggc ttaagagatg
      841 gcttagataa catagaagaa caaatttttg atgttttctt acaaattcca aattcagaac
      901 tttcaagttt gcaaatttca ggctttaatg atgaaacaaa aggcaaagat tatgccaaag
      961 tttctaatga tatcaaactt gctttagatg aaattttaaa aaattatgat ggctttagca
     1021 cttctatggt agatgattta caaggaattt atctagatat ttttgaagca agcggtatgg
     1081 aaaataaaat cggtgctgta gatagtggct taaaacttaa aatagaaagt ttattttcca
     1141 aaggcatggc actgattaaa gcaagtgcag ataaaaaaga gcttgaagct acttttaatg
     1201 acttagaaca actcatagcc agcagcgtgg ataaaattca agattctact ccttattcgc
     1261 tgtttatatg ggctttaggt attattttgc gtgaaggctt ggaagctttg attatcattg
     1321 tagccattgt ttcttatctt gtgcaaagtg gcaacaaaaa tcgtctaaat atcgcctata
     1381 gtgctctttt tacaggagtg attttaagtt ttattaccgc ttttggagtt tcttggctat
     1441 ttaaagaaaa tgcaggtcaa agtagagagc ttatagaagg tattaccatg cttatagccg
     1501 tattactact cttttatgtg ggcttttggc tactttcaaa cgcacaaaat aaaaaatgga
     1561 caagctttat caaacaaggt gctatagatg ctatatcaaa taatagcgca aaaacccttt
     1621 ggattaccgt atttttagct gtttatagag aaggtgcaga aactgtgctt ttttatcaag
     1681 ccttgctttt tgattctaaa acaagcactg attttggtgc tgtttttggc ggacttggac
     1741 ttggaatttt aatacttatt gttttatatt ttcttttaaa agcaggagcc attcgcatac
     1801 ctgtaaaaca atttttctat atcacttctt acattatttt ttacatggtt tttgttttta
     1861 caggcaaagg catagccgaa ctcatagaag gaaaagtcat cattcctagt cttataccta
     1921 tgaattttga accgatttta tggcttggaa tttatcctta ctatgaaact ttaatccccc
     1981 aatttatagt tttgacaatg ctaattattg gcattttgat aacaaaacaa atttcaaaaa
     2041 aaggagtaaa atcatgataa aaaaagtttt atcagtagtt gctgcagctg cggttattag
     2101 tacaaattta tttgcaggcg aagtgccaat tggcgatcca aaagaactta atggtatgga
     2161 aatagccgct gtttatttac aacctattga aatggagcca agaggtattg atctagctgc
     2221 gtctttagca gatattcatc tagaagctga cattcacgca cttaaaaaca atccaaatgg
     2281 ttttccagaa ggtttttgga tgccttattt aactatagct tatgaactta aaaataccga
     2341 cacaggtgca attaaacgcg gaactttgat gcctatggtg gctgatgatg gtcctcacta
     2401 tggtgcaaat attgctatgg aaaaagataa aaaaggtggc tttggcgtag gaaattatga
     2461 acttactttt tatatctcaa atccagaaaa acaaggtttt ggacgccatg ttgatgaaga
     2521 aacaggcgtg ggtaagtggt ttgaaccttt taaagtagat tataaattca aatacacagg
     2581 cacgccaaaa taattttacg ctcggatttt ccgagtgttt gaatattttt atttttattt
     2641 gaaaaattaa aataacaatg tttaaagagt aaattatgag tatatatttt gtgcattttc
     2701 ttatcagtgt tttaccgcta agtattttaa tggcctttat cactcctgat aaaaaatata
     2761 tttttaaaag ttttttagta gtttttttgg gctttttatt tggatatttt gcttttttta
     2821 tcgcagcaca atttttaaaa accgaaaatt taatctttaa ttttgatttt gtttttatag
     2881 gtttattgct agtaagcttt atattttatt tttggaaaaa aattgaaatt ttaaatttta
     2941 ttttattggg aattttaagt ttttgcaccg ctttgcatta ttatttttta agtcaagatt
     3001 tccctatttt tactagctct ttaatcgata gcgaaggtat aagttcttta ggttttattg
     3061 ctttagcctt gcttgtttgt attttgattt tcttcttttt aaaatggcaa aaaaatttta
     3121 atcaaaaaac aagctttatg ctgtttttac tgcttatcct tatagaaagt gataaagctc
     3181 tagccaatat cttgcttact ttaatgcgaa attccatcat agaaactcat acttttttgg
     3241 tgagttttgt aggaaaaagt aattattttg gtgtttttgg aatttatgtt tatttaattt
     3301 tcatcgcttt tttagcattc ttaagcttaa aaattcgcaa aaaaaatata agtaaaaaac
     3361 aaattttaga tataaattat cgcaaaaacg aagctaaaac aagtcttatt aatcgttatt
     3421 tttccagtgt ttttatctcc tgtgttataa gtttttgcat tattttatac ttttttatgg
     3481 taagctctaa gcctttaacc atagatgagc ctaaagaaat tttacccgat aagaatggca
     3541 aatttatctt tgatatagct cttttaaggg acaacaaact tcaccgcttt gcttatatca
     3601 gtgctgaagg caaagtgata aggttttttc ttatcaacaa aagagaagat agggattctc
     3661 ctgtagctgt ttttgatgct tgtatgattt gtggagatat gggctatatc aaaaaagatg
     3721 ggcaactcat ttgcatttct tgcaatgtgc gtattttctt acctagtgta ggcaaaagcg
     3781 ggggttgcaa tcctatccca ctcaaatacg aatacgatgg taaaaaaatc accatagatg
     3841 ttaaagatgt aatagcagga tctaattatt ttagtcaaat caaggaaatt gaagtgcaag
     3901 atcctgtatc aaaaacaaaa attataaaca cccaagctcc tttttcttat agctataaag
     3961 ggattactta ttatttttca aatcaaaaca actatgaaga atttaaaaaa gatcctacaa
     4021 aatatgtaga agaaaacgaa gcccaatttt taatccaaag gagaaacgat gttggctaaa
     4081 atgattttta actctatatt taaaaacaaa attcaaaaat ttttagcctt tcttacttgt
     4141 tttttagcca cgcttttgct ctctactatg ctaaatatta ccctaagtat aggcgatgaa
     4201 gtaaccaaac aactcaaaag ctatggctct aatatccttg ttttacccaa aggctcaagt
     4261 cttagtatag aaataggtaa cgaactttat gaacccttaa aaaacaaaaa ctacctagaa
     4321 gaaaaaaatt tatacatgat taaagacatt tattggcgta acaacatcac cgcacttgct
     4381 ccttttttag aaggtaaaat cacaattgaa aactcccagc aaaaagcact tatttatggc
     4441 acttattttc aaaaagccat aaaaattaaa gatgatgatg attttatcac aggtataaaa
     4501 agtctttatc cttatttagc agtgcaagga gaatgggcaa aagatgatag caatgaaatc
     4561 atgctaggcg aagactttgc taaaaacaat aaactaaaat taggagatac catcaaactc
     4621 ataggagaaa acaatcgaag caaagaagca aaaatcgtag gcattttact tcatgccaat
     4681 cctaaaatgt cgaataaaat catcgctcct ttaaatttag ctcaagattt actcaacaaa
     4741 caagggcttt actcaagtgc agaagtaaga gcttttacca tacctgaatc agccctttct
     4801 gaaaaagtgc gtcgcatggg cgaagaaaaa ttagatcagt tagaatatga caaatggtat
     4861 tgctcagcct atgtaggctc aatcgctagt caaattagcg atggcttacc aggttctgat
     4921 gcaaaagctc taaatgctat aagcgatgct caaagcttgg tggttaaaaa gatccaatcc
     4981 ttaatgggca ttacttgcat tatttgtctt attgttgcaa gtattgcgat ttcaagcctg
     5041 atgagttctg aaattcatcg tagaaaaaaa gaaataggac ttttaaaagt gcttggtgct
     5101 aatacttttc aaatttatct catctttgct agtgaaaatt taatcgtagc tttatttgct
     5161 gctttatttg gatttatttt tggcacagca ctttctcaaa tcatcagtct tagtattttt
     5221 ggatatttta ttgatatagc ctttgtagct ttacctttaa gctttatttt tgcaggactt
     5281 attgccttac taggttgctt gcttcctatc aaaaatatca cacaactttc agctgcagga
     5341 gtgctttatg gtagataagt ttttccttaa tgagcttttt aaaagcatta gcttttctta
     5401 tcaaagactt tttataatag ttttaagtgt ttttatagga gcacttactt gctcagcttt
     5461 tttaaatatt tattttgata tcgacatcaa actttctaaa gaattaaaag cttatggagc
     5521 aaatgtaatg atcagcccta agcaggatga aaattttatc tccaatgctg agtgtgaaaa
     5581 agtaaaagaa aatttaaagg ctagagcttt aactcctttt ttgtatgatt ttttaaattt
     5641 aggcagtaca agtggggtgg ttttaggcac tgattttagg gctttaaaaa tcactaaacc
     5701 tttcttagaa gttaaagaag gaagcttttc tctaaatgat tttgatgaaa attcagcctt
     5761 tttaggagtt aatttagcca agcaactagg cctaaaagca ggcaatgaac ttcaaattta
     5821 caatccaaac aatggaaaaa gcacaaaact taccataaaa ggcatacttt caagcaatga
     5881 tgaatttgat agcattgttt tagctccttt aagcgtggtg caaaatttaa gcgatagagc
     5941 cggtattaac tatgctaatg ctgtagttta tggaaatttt gatgaagtta aagccaaaac
     6001 acaagcaatc agcaatgaat tcatcgatgc aaaacctata tcttcagtat ccttaagtga
     6061 aggtttagtg cttggaaaaa tcaaagcttt aatgttttta atcatacttg tggtattgat
     6121 catagttact actagcgtta atacaacttt aagttctatt atattttctc gcaaaaaaga
     6181 aatcgcactg cgtttagcct tgggtgcgaa aaaaagtgaa atttttaaac tttttgctag
     6241 tgaatgcttt atagtaagtt tttttgctag tttaatcgga gctttttgtg ggatattttt
     6301 agccaatgtc tttggttatt taatttttaa ttctagtatt gattttagat ttatagctgt
     6361 ttttatagcc ttaatcattt ctttgatttt tgcctttttg gctgcatttt ttcctataaa
     6421 aagagcatta aaaatcaatg tgtgtgaaaa tttgaaaggt gaatgatgaa aaaagaactt
     6481 attaaaataa acaatttaaa taaagaattt ggcaaagtta aagccttaaa caatatcaac
     6541 ttaagcgtct atgaaggaga atggcttgcc atcatgggtc catcaggaag tggaaaatca
     6601 acacttttaa acatactatc gctcatggat actccaagct ctggagagta tatcttggat
     6661 aatgaaaacc tagagcaaat ggatgaagag caaaaaatca ccttgcgtcg tgaaaaaata
     6721 gggcttgtct ttcaacaatt tcatcttatc ccctatctta acgccttaga aaatgttatg
     6781 ctctctcagt attatcactc aagtgtagat gaagaagatg ccaaaatggt tcttgaaaaa
     6841 gtaggacttt cgcatagact cactcattta cctagccaat taagtggcgg agaacaacaa
     6901 agagtttgta tagcaagagc tttaatcaac aacccagagc ttttactcgc agatgaaccc
     6961 acaggaaatt tagatgaagc caatgaacaa atcgttcttc aaaccttgca aaaattaaaa
     7021 aatgaaggta aaaccatagt tttaatcaca cacaatcctg atttagccaa attcgcagat
     7081 cgaaccctta tcttacaaca tggggtgtta aaatgaaaaa aagcctttta atcttaagta
     7141 ttttgttttt actcaatgct tgttcttttg aaaattcaaa agatactgga aaagttggag
     7201 aaaaaagcgc tgaaatttca gctaaagata ctttaggaaa agctgtaaaa cttgctgatg
     7261 ataatacaag tttaaaagtc ttagtctttt ttcaaaatgg ctgcccttct tgcttaaaag
     7321 aactcccttc tttagatgaa ttcatacaaa atcaccccaa taaaatcagt gtttatgcta
     7381 taaattccat cgataatgcc aatgtggtta aggttttagc cgaacaattt gactttaaaa
     7441 atgtaaaagt tttaaaagac gatcttaaaa tcaccaatga tcgttacgct gtgtttgcaa
     7501 cccctactac catcatcatt aaagatggga tgataaaaga tagaatttta ggagaaaaac
     7561 catgggaatt tttcgaatcc aagcttattt ctttgcttta atcatagctt tattttttgt
     7621 agcttgtgat agtggagaaa attttaaagc tttaaatagc gataaaacct ataattttgc
     7681 ctacaatggt tttgaaaaaa gcctaaaact aaatgataaa gcacaaaatt ttgccttagt
     7741 atttttcaca aaagattgcg gagtttgcaa agaacaaatt cctattttac agaatttggc
     7801 taaaaattat gattttaata tctttgtggt tttaggcgat gcaaacgatg caaacgatgc
     7861 aaaagcttgg gctgatgaaa aaggtttatc taatttagca atgttttatg aaaaaagagc
     7921 agctaaatac ctttcaagtg ccattgggga aatatatgga gtacctgtgc ttagtttttt
     7981 caaagaagga aaaatggatg aaaaattcat aggcttaact ccttatagca tacttgaaaa
     8041 agaaatcaaa aaagtaaaaa gctaaaaatt tactttaaag ctttttatcc cctataaaat
     8101 atccataaag ctcatagctt ccatcttttt tcatcaaaat tacaggatat ttttcactat
     8161 aaccttgttc cattcctgga cttccttgcg gcatgccagg agctgaaatt cctataacat
     8221 ctttaggttt gttttcaagc aaccatgcta tagcactttc aggaacatgc ccttcaatag
     8281 catagccttc aatcacacct gtatggcaac tttgatactc atcttttata cccatttttt
     8341 ctttgatttt aagaaaatca ttggttttat gaacactaac ctcataaccc ttagctttca
     8401 tataatcagc ccaaagatca caacagccac aagtaggact ttcataaatt tgtatttcct
     8461 tagcctgcgt aagagtgagt aaaaaaagaa tggttaaaat tgtttttttc ataattgcta
     8521 tcctaagtaa aaaatatata ataatacttt tataaagtta atatcatcac atttttaaca
     8581 ctaaaaatga atttacaaaa atttaatcaa gaaaagactt ttaatgagtg ttgattttgt
     8641 ctttgcagca aagatataaa agataaaacg atttaaaaaa ctagaaattt ttaacttaaa
     8701 aagcttaaaa tttagatata ttttatactt actatgtttt ttcatagtat gttctaatgg
     8761 tggatttccg ccaagagtga aaactcaagg cggattttta tttgcaatat ttacttaata
     8821 gaataattat gatcagctgt gcctccacat aaatacccct tcttatcaaa acttgcaatt
     8881 tcgcaagaaa gagtagataa tctagctctt ttaccatcac tagttaatat aagaacttgt
     8941 ttataataaa cataattgct tttatctgaa tattcttttt gtattatagc ttgagttgaa
     9001 ttataagttc ttggatcaac ttttgcaaca atatctgctt cataaaaagt tgccttttta
     9061 aaaagtggct cagttaaagt tgattttata ctctcttgga aatatttgtt ttgcatttcg
     9121 cttgctgaaa ctggaactaa atctttttta ttgataacta tcaaatctgc aaatgctgac
     9181 acatttaaag caactaaaac tgctaaaact aaacctaatt ttttcatttt atctccttga
     9241 attgaatttt gtatatttga attatttttc aaatcttttg caagataatt tttaaattta
     9301 tctaaattaa atttgcattt tatctaacaa tcataagaaa ttttaaaatg aaataaaaat
     9361 ttatgagaaa tcaactctta tttgaaaatg ataaaagtaa gtggtgcgga tgaaaggact
     9421 tgaaccttca cgcattgctg caccagatcc taagtctggc gtgtctgcca atttcaccac
     9481 atccgcaaag tggtacgccc aagaggattc gaacctctga cctacggctt agaaggccgt
     9541 tgctctatcc agctgagcta tgaacgcata taaaatcttg gtggtgcgcc cgataggaat
     9601 cgaacccata acctacagat ccgaagtctg tcgctctatc cagttgagct acgagcgcta
     9661 gtggggtgag tgatgggaat tgaacccacg accctcagga ccacaatctg atgctctaac
     9721 cgactgagct acactcacca ttttgtataa atttataaaa aatggtcggg gtgaaaggat
     9781 tcgaaccttc ggccccttgg tcccaaacca agtgcgctaa ccagactgcg ctacaccccg
     9841 aataaataaa aggaaatatt ttatcacaaa ataattttaa agtcaaggat tttcatctct
     9901 tattcttaaa aacaccggaa agcgaggtaa ggaatttttg gtcaatccat taaatttata
     9961 agtcacaata ctaccaattt ttggaggatt ttttctatct tcatctttta aaccactgcc
    10021 tattttaatg atttgtccat taggcatttt acaaagtaag gcacctactt gattttcaaa
    10081 tttacccttg cccttgcgaa atcctaccaa ctcacattct gcatcatcat agggttttaa
    10141 tttcgtggca tttttacttc tgcctttttc ataaggactt aaatttttgc gtataacaat
    10201 accttcacct tgatttttta taatgctttc gtaaaattga tttaaattat tttgattttc
    10261 aactggaatt tgagaaataa tttttatata ggcactagga tatttttgca aatactcttc
    10321 taaaacagcc aaacgatttt taagagtgca agtagaaatt tgaaattctt cgcaagcatt
    10381 tggtacatca aaaatattat aagttacttc cttccataag gtcaaattgc tatcgccact
    10441 acgaattaaa gctgaaattt catcaaattt atttcttgct atccaaagct caccatcaat
    10501 agcaaaagga gggaaatttt ttgtaaaaaa gtcaggagtt tttattttgt agttttggcg
    10561 agtttttaga tatttcccat cccaaattcc acgcactcca tcaagttttt cgctcatcaa
    10621 ataagcatta aaatctttag agttaaaatc ttgcttatcg aatttgctaa gaagtaaaat
    10681 ttcattagca aaaactaaac aagcacaaca tattaaaaaa acaaacctca tcaaagcaga
    10741 ttaatcatat atccagttgc atctttttga atattataat tataagttcc atcaagatat
    10801 attacaagtc gataatatcc tttatgagat ccaaagtcta tgcgtttaaa aatagaattg
    10861 ctaaggcgta tgttttttgt agggctaatc attttagatc taaaatctat aacgatttta
    10921 cttggatttc ctactgaaaa atctgtaatc atttcatcac tagtgttaag ttttatttta
    10981 tttttataaa ccgcataaga aataaaatca taaatctttg caacctgtaa aggtatttca
    11041 acattggctg ttgagtttga ttcttgttta gagctatttt tttcaggtat agtaactgaa
    11101 acatcaagta cttttgaagg atcagggctt ttaaatcttg atatagtata agtatcgtgc
    11161 caatcaatac ttttattgac atctaaatcg atcttatctt cacttccgtc taaattgata
    11221 taattaaaag tgatgctttt taaaattctt gcactagaat taaatttaac ttcctctttt
    11281 tgaaattcag gtggagcaac caaggttata ttttgatctg tcttgaaagg attttcatca
    11341 gcatataaaa gagaggtaaa aataaaaaat attgccaaaa ttctagtttt catttgggta
    11401 taatcctttt aattcaaaat aatctttttg tgctttagca ttttgttctt tgagcaaaat
    11461 aatcttttta ttaagctctt ctttggtatt ttctaagctt aataaagtat ctaaagaata
    11521 ctgcccaaaa aacatattgc caaaataaat cgctccaatt acaacaagaa aagcccaaaa
    11581 aatcattttt ataacatggg tataaaaact tttttttctt gtgctttcgt cgtattcttt
    11641 aagtaaatcg ctcagagctt ttctcctaaa tattcatcgc tttcaaattc aatttcaagt
    11701 aagcgattgt attttgcggt tctttcgcct cttgctaggg ctcctgtttt aatttgtcct
    11761 gtatttaaag ccacagcaaa atccgctata aaagcatctt cactttcgcc gcttctatga
    11821 ctcatcacac atttatagtt atttctttgc gctaaacgca cagttctcat agtttgggta
    11881 atagttccga tttgatttgg tttgataagt acagcatttg ccattttttt gatgatacct
    11941 tctcttaaaa tatcttcatt ggtcacaaac aaatcatcgc ctacaagctg aattttattg
    12001 cctaattttt cagtcagctt gatccagcct tcaaagtcat tttcagctaa gccatcttcg
    12061 atactgcaaa ttggatattt tgcacaaagt tctacatagc gttcgatcaa agcctcgctt
    12121 gaaaaagcct tgccttccat gtggtattta ccatctttga aaaattctgt acttgccaca
    12181 tcaagagcaa tttttacacg attttcataa cctgcttttt tgatacaagt cattaaaaga
    12241 tcgataggtt ctgtgttgtt agctaaattt ggagcaaaac cgccttcatc acctaaagcc
    12301 gtagaatgtc cagaatttgc gagttctttt tttaatatcg cataaatttc acaaactgaa
    12361 cgcaaagctt ctttaaagct agtaaaacca aaaggcatga tcataaattc ttgaaaatct
    12421 acattgttgt ttgcatgagc accgccattt atgatattac acattggcac gggtaaaatg
    12481 ctcgcatttg caccacctaa gtagcgatat aaaggcattc ccaaagcagc tgcagccgca
    12541 cgagctgttg ccatagatac gcctaaagtc gcatttgcac ctaaatttga gtaattattt
    12601 gttccatcga gctcacgcaa agtatcatca agttgagttt gattaaaagc atctagtcct
    12661 aaaatttcat ctgcaatggt ctcattgaca tttgcaacag cttttaaaac gccttttccg
    12721 ccaaatcttt catcattatc acgcaattct aaggcttctt ttgaacctgt acttgcacca
    12781 cttggaacta tggccgcacc tacacttcca tcgcttagcg taacttcggc ttttacggtt
    12841 ggatttcctc tactatcaag aacttcatag gctctaacat cttcaattac taacattatt
    12901 cttctccttc gtcatcttcg ctaccgctga tcataccttc tattcccata gaattttgaa
    12961 ttgcttttgt gatttcatct gcaatttcag ggttttcttt taagaaagct tttgaatttt
    13021 ctctaccttg tccaagtttt ttatctttat aagaaaacca cgcaccactt ttatctacga
    13081 tatcaagttt tacaccataa tcgatcaatt caccttcacg gcttaaaccc tctccaaaca
    13141 tcacatcaaa ttcagcttgt ctgaatggag gagcaacttt atttttaact acttttactt
    13201 taacgcggtt tcctataggt tcttcgtttt gttttaaggt tgctactttt ctaacatcta
    13261 aacgcacaga agcataaaat tttaatgcat ttccacctgt tgtggtttca ggagtaccat
    13321 aacccatagc accgattttc atacgaattt ggttgataaa aattactgtg gtattcattt
    13381 tatgaactat acctgtaagt tttcttagag cttgagacat aagtcttgct tgaagtccta
    13441 catgttgatc gcccatatcg ccttcaattt ctgcttttgg agtaagtgct gcaacgctat
    13501 ctactacgat aagatctact gcgccacttc ttgctatagt ttctacaatt tctaaggctt
    13561 gttctccaaa atcaggctga gaaacataca aatcatctgt atttacaccc aaatttttag
    13621 catattttac atcaagcgca tgttctgcat cgataaaagc acaaactcca cctgcttttt
    13681 ggcattctgc gataatatgt aaagttagag tggttttacc tgaactttca ggtccataaa
    13741 tttctataat tcttcctttt ggaacaccgc ctatacctaa agcaagatca agcccaactg
    13801 aacctgtgcc tatgctatcg atttgctcga cttctttatc ccctagtctt aaaatagtgc
    13861 cttttccaaa ggttttatct aaacttttta gggcagcgtc tagagatttt cttttattat
    13921 catccataac tttccttaaa aattctaaat ttttagttag aattctaaca aaataaaatt
    13981 aaataatgat ttattttgct agaattaaag caaagattta aaggaagcat agatgaaaaa
    14041 aattactatt gcacattctc ctgatgctga tgatattttt atgtatatgg caattaaatt
    14101 tgggtggata gggaatgatt ttgcttatga aaatacagct ttagatatac aaactttaaa
    14161 tgaatttgcc ttgaaaaatg aatttgatgc tacggctatt tcttttgggc tttatccttt
    14221 aatcgcttct gagtatgcac ttttacgcac agcagtgagt tttggtgaag gttatgggcc
    14281 aaaactcatc aagaaaaaag acacgcattt aaaaagaaat tttaaagtcg ctttgagtgg
    14341 agcaaatacc accaatgctt tgatttttcg catgaaatat cctgaagcaa gaattattta
    14401 taagaatttt ttagacattg aaaatgcggt tttaagtggc gaagtagatg cgggggtttt
    14461 gatccatgaa agcattttaa attttgatca aagtctttac gtggaagcag aactttggga
    14521 tatatggctt gaatttgcta aagaaaattt gcctttgcct ttaggtggaa tggctttgcg
    14581 tcgttcttta cctttaagcg acgcgattaa gatcgaaaga gatttaacca atgctgtaaa
    14641 aattgccgat gcaaatcgta aaattttagc ccctatgctt atggaaagaa aacttatccg
    14701 tgttgatgaa gaaaaacttg atacttatct taatttatat gccaataaaa actctattag
    14761 catgaatcaa actcaacttt tagctgtaga tacgcttttt aaactaggat atgattataa
    14821 attttatgat aaaatcatac atgtaaatga ttttcttatc cctagcgaat acgaagaagc
    14881 tagaaattct taaaaaggat aaaaatggat gaaagtacct tagttgctct tggagtgcaa
    14941 acctttaaaa tcacactttt actttccttg cctatgcttt tagcaggact tattgcaggg
    15001 cttgtgatca gtatttttca agcaactaca cagattaatg aaatgacact ttcttttgtt
    15061 cctaaaatca tcttggttgt agttatttta atctttttaa tgccttggat gactacaact
    15121 atgattgatt ttactgagaa tatactaaat caaattccaa cttttatcaa atgatcattg
    15181 attttaaaaa atactcttct gtgcgtatag gaaatgaatt tgaagtttta gttttggatc
    15241 aaatttgtga ttttgatggt tttttaatag gtggtgcaaa caacctttta gttagtccaa
    15301 aacctaaaaa tataggaatt ttaggagatg gttttaattt tatacaaatt ttagatcgga
    15361 ataaagattt tatacatctt cgcataggct gcaaaacaaa atcaagtaaa atgtatcgct
    15421 ttgccaaaga aaacaatctt aagggttttg agtatttaag caaaattcct ggtacacttg
    15481 gcgggctttt gaaaatgaat gcaggactta aaggagagtg tatcagtcaa aatttaatca
    15541 aaattgctac ttctcaaggc gaaattctaa gagcaaatat aaattttgat tatcgttttt
    15601 gtcctttaaa tacgcatttt ttttgggctg aatttaaact aaaatttggc tttgataccc
    15661 ttaaagatga agctttaaaa aatgcaagaa gcaaccaacc tagtggagca agctttggct
    15721 ctatctttaa aaatccgaaa aacgactttg caggacgttt aatcgaagct gtaggactta
    15781 aaggatttag caagggagat gctatgttaa gcgataaaca cgcaaatttt ttaattaata
    15841 aaaaaaatgc aagttttgaa gatgcgtttt ttcttatcga attggctaga aaaaaagtct
    15901 ttgaagaatt tggcacaaac ttagaaaatg aagtgattat aatctaaaca cacaaaacaa
    15961 taaaagtcta aaaaatttac tcttaatcta actttaaata aaa
//
LOCUS       DAPIWB010000042        15914 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.043, whole genome shotgun sequence.
ACCESSION   DAPIWB010000042 DAPIWB010000000
VERSION     DAPIWB010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15914)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15914)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15914
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.043"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(42..2408)
                     /locus_tag="RJ266_001121"
     CDS             complement(42..2408)
                     /locus_tag="RJ266_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein"
                     /protein_id="HDV7354867.1"
                     /translation="MRILFLILLSFLNAFAFELVLNTGRENNQAFAVLHASNDLEFTC
                     QKFITEAKVHFECDIVGMVDNKLKDQSFSAFDLKFIQEAQKIKMIILPKIQARMFDTS
                     QNIYIDKELSSSSSHKSKAFTFIFTPELAPIKDYDGLDFNINFPHESLPYVGALDLNS
                     DPVVIPQSADINTYLRIKKEYDKANYNQVVIDAQNAINRYRGSIFTSEFILYKLRAQN
                     KLYTQDPSMRDQQILEKMIDDAKNWTRTFTSDKNFSEVLHIMLRTYIALAQRADVEYT
                     MSILDNEQPNNYFTQLSKLDYADYIYNLNEKEKAVNIYENTYFNTKNLDLAARAAMSL
                     AKNLLSNEQVNKAIEYINTILKANPKYFGKDIPRSLELAKLFNQKGQFDISASIYEDA
                     FAKMSKLDPSYEETLKDLALVLSHANRSSDAKKYLDLYMDDYLDGKYLDEIKKASDEV
                     FFALGDNNASFLHQRYTDLMKQYANKDENIANKALDEDVALYYKEGNFSAILAYKDLI
                     ESKKIPNATQFLEKAAINDLKNAIKADNCINAANIFMRFSAYDIGQKIENKKQMLACL
                     IRTSNVEQALDYIDKNYNENSIFYGLQKASILFDNKQYPQVIKISKDIANSRILKSDD
                     ENFKAYYLQFLSLLRLNDYNQAIKILQILESFPMNFSMVEAYDALLSYANDHNMQTTI
                     LTYAPKAIDYQNFKGINLFSPNLEFIYLDALTKINKNEESLAVLTDLLKLKLSDEDRA
                     RALYIQALTYERMQNIQAEKESLKQCLEIKSASNWQNLCKSKNQILNQ"
     gene            complement(2430..3818)
                     /locus_tag="RJ266_001122"
     CDS             complement(2430..3818)
                     /locus_tag="RJ266_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HDV7354868.1"
                     /translation="MLNNFLNLELLNISLSYPFLFLITTAIVLLLCSGFWKFHRSFYI
                     GISSLSLIVSAFLILNNANAQGLDAKAFLATLNNDIVSFYASLVILCFSFLYLLMQKE
                     ENQGEFYALFLFMIASLLLMVSSSNLVLIFIGLESSSLALYTLIAMRGSDNAISSAIK
                     YFSIAAVGAGFFVMAVAFIYLKTGTLDLSANLALKNEFQKDPMLLGAGVMIFVLCAIK
                     LSLAPFHFWLKDVYYAAHTNLVAFISVVPKVAMLVVVIRLFDFLNNTGFEYIIIVLAI
                     FSMLIGAFAALSQNNIKKMFAYSSVVHSSLVLIACIPLLKEQNFDGILLAIFGYWTLF
                     AFANYAVFMILSNYENNSYESLNGLLVKKPLIAFCLSISVLSLAGIPPFGVFWGKFMI
                     LNTVILNGYWYLALFVALSSVIMLYAYLKILIHVLFMKNDRVYNIKFSFIQNFILAFC
                     VCVSTFAILLML"
     gene            complement(3808..5295)
                     /locus_tag="RJ266_001123"
     CDS             complement(3808..5295)
                     /locus_tag="RJ266_001123"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HDV7354869.1"
                     /translation="MLNYLIFFPLISAFVVLLLNRGGVKVFSVVVSFMILALNLDIFA
                     DFLQGVSFDYNLSFKILKFFSFHVGVDSIALVLMLLSSLMIFLSFLFLKLEQKALVSC
                     IFFLEFAIMGLFSAKDGLLFYVFWEFSLLPLLYIMGVYGKDFRAGVKFFIYAFAGSIL
                     MLVALIYQAYLNYQLLNIFTFDLEIWKNNASAVNFTEQLLLFGAFFIAFAIKAPLFPL
                     HTWAPKVYANSPVLVSVMLVVFKMAPFGFLLFCLPLFPDASVYFMPLIVALCIVSIVY
                     NALIAYRAENIKELIAYSSISHLGVMILGIFSLNALGISGAVFYMFAHGIVTGALFLM
                     VELLYQRYHTYDISFYHSLAKKAPLFSIFFMLILLASVSLPLTVSFVGEFLILLGIAK
                     INLFYALLAGLVIILGAIYMFAVFRKIFFMQKQSFIEGFSLRFREIVALVCIIVMIFG
                     LGLMPNILLKPIQKDVDNLIKTMNIRAVEQNTLDFLSKIGEANVK"
     gene            complement(5297..7087)
                     /gene="nuoL"
                     /locus_tag="RJ266_001124"
     CDS             complement(5297..7087)
                     /gene="nuoL"
                     /locus_tag="RJ266_001124"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HDV7354870.1"
                     /translation="MQNLALISLFSPFVAFLFASCFALSEKKQFVGIICSLLIALSAF
                     CSLYLFFCNEAFNVSLFEWFAGVNFGFDIDAISLTMMSVVGIVATCVHFYSIFYMAHD
                     EGFNKFFAYLGLFVFSMLFLVMSDNFLGLFVGWEGVGLCSWLLIGFWYKNDTYSFAAN
                     EAFIMNRIADLGMLLGIFWLYLQAGTLKYDEVFSMAQSLDHNALILIATCLFIGAMGK
                     SAQFPFHTWLADAMAGPTPVSALIHAATMVTAGVYLVIRASTLYDLVPEVSYIIALLG
                     AFVAIFAASMALVARDLKRIIAYSTLSQLGYMFVAAGLGAYGIALFHLATHAFFKSLL
                     FLGAGNVMHAMNDKLDIKKMGGLFKPLKFTAILMCIGSLALAGIYPFAGFFSKDLILG
                     YSFISFHHGIFLVLLIAAFLTAFYSFRLLMLVFFTPARHNEHPHEASKIALLAMSPLM
                     VLAIIAGFFEHSFFEYLSIKLVFIDAQNQIVMICASAAAILGVILAIFAYKNSWFKES
                     IEENKIHKLLSNDYFIPQFYHQFIVSKYESLCAILKHCDLYIFDRIVEKIALYSQIIS
                     QKMIMPNSLNLMLRFLVAAFVILLILVWMV"
     gene            complement(7089..7385)
                     /gene="nuoK"
                     /locus_tag="RJ266_001125"
     CDS             complement(7089..7385)
                     /gene="nuoK"
                     /locus_tag="RJ266_001125"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HDV7354871.1"
                     /translation="MIEKYFFVAILMFVIGLVGILKRQNLIMLFISSEILLNSANLAL
                     VAASKMHNDLNGQVFALFIMGVAACEVAVGIALCVLWYRRKGTLELKSLKEVEA"
     gene            complement(7382..7900)
                     /locus_tag="RJ266_001126"
     CDS             complement(7382..7900)
                     /locus_tag="RJ266_001126"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HDV7354872.1"
                     /translation="MIENLAFVFFSVVVLGFFGIAVLSKNMLYSLSALAGGMVFLSGF
                     YFLLDAEFLGVIQIIVYSGAVLGLYSFAMMFFDASKEFKEQLKAKKSFFTLVVLSTIL
                     LLAMLIGFKYQNISTDLPLNDPALFDFNKQLALAIFSKYLLAFEFIAILLLIALVCAI
                     TLTHKELTKEKQ"
     gene            complement(7897..8538)
                     /gene="nuoI"
                     /locus_tag="RJ266_001127"
     CDS             complement(7897..8538)
                     /gene="nuoI"
                     /locus_tag="RJ266_001127"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HDV7354873.1"
                     /translation="MKNYYLVDEKRKTPVSTWEKISQALRRSVKLELFVGLFVMMREL
                     LKRNNSATIKYPFEKVKFDNRYRAVHRLMRFIESENERCIGCGLCEKICISNCIRMET
                     SLDENGRKKVENYSINLGRCIYCGFCAEVCPELAIVHGTEYENAAEQRSYFGYKQDFL
                     TPIDKLKNQVEFEGAGSLRKDANLRVKKTPNYYDVMIERALENQNTQEQGENK"
     gene            complement(8548..9546)
                     /gene="nuoH"
                     /locus_tag="RJ266_001128"
     CDS             complement(8548..9546)
                     /gene="nuoH"
                     /locus_tag="RJ266_001128"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HDV7354874.1"
                     /translation="MSDFAFFALETLIKCIIIIAIFASLAGLATYAERKVLAYFQRRI
                     GPDMVGPFGLIQLVADMIKLFTKEDIIPSNSQKFIFAIAPLISAICAFVSLAAIPMLP
                     EFTLFGRVIQPIVADINVALLFVIGTSGLCFYAVFLGGLASNNKWSILGAARGLVSII
                     SYESVGALALIAIIMLVGSFSLVDINNYQSDGFFSWLIFKQPLAFVLFIIALFIETNR
                     TPLCLTENDAEIVAGYGTEYSGLRWGMFFIGEYTSMIAGAILVTLLFLGGFNSFWIIP
                     GWIMMIVKSSFIFFWYFWARAAFPQLRPDQVMKMCYLILIPLAVLNLLITALAVLL"
     gene            complement(9539..12001)
                     /locus_tag="RJ266_001129"
     CDS             complement(9539..12001)
                     /locus_tag="RJ266_001129"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit G"
                     /protein_id="HDV7354875.1"
                     /translation="MTVKINGIDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLAC
                     RMCMVEADGKKVYSCNTKAKEGMVVESDLQNLWDERNEIMQAYCINHPLECGVCDKSG
                     ECELQNFTHKSRVNVQKHWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESA
                     LKTVPRGGDSVDNSFKESMGKDAYAIWTKFQKSLIGPANGDTLDCSFCGECTSVCPTG
                     ALIGSKFQYTSNIWELKRIPASNPHSSDCELMYYDIKQSGISNQKEKIYRVSNDFAFA
                     SLNKAARFAFDTQNEADKDEKAFKELVELFEKNEIKNIKFNSFITNEEALILQNLKKK
                     FNLSLINEEALKFKEFLQEFIANSGEFYSANTQDITKSDFLVVAGMLLRYDAPTLSYK
                     INNALVMNKGSGLYFHPMEDMGIAKYSKNFIPHIHKNGDEEQILYFLLQKFSQDEGIK
                     THLAEFFISENKEIEESINEEVVEQVIEKDEEGNEIQKEVKKVVPKKVKKIIEVQRSI
                     FAKNLGIDEDKLEDLLLKKANFTLVVGSDFYFHKNAKKLAKLLALIQNTTPFKVFLNP
                     THTNTLGVAIICDLDKNTQEGKTLGYNEKGDFSFSYEEHANLASASLNQQEGTFLNYD
                     KRVVPTNAALEFKGYFLNDLANALGFDEEYTINYTKRLPINKGFSPIDFDHLDNFYTN
                     AGDCKRGYELNLECFKQVAKKDFISPNFENLSLKEDEILLYSANPSYQFGRFSNRASA
                     INEVIFLAVSENLAKEKNLKDKDLVKLKIKDKELSLSVRVDKDIKNGAFLPYFDEKLD
                     TLSFFDERFVVANLEKLGANHE"
     gene            complement(11998..12690)
                     /locus_tag="RJ266_001130"
     CDS             complement(11998..12690)
                     /locus_tag="RJ266_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354876.1"
                     /translation="MIYDNALCFLDMPSLKNKNLCEKIGVNSINISCLEDKNLKAKFY
                     KCEIASLSFVLALLCKLSDEGQFCDLDEGYLSAESCFGEEEAGEVLAFLKEVKYLIID
                     KNIHSYKDSENIKYFLNFLSVKYGLKILDSDEEECDFKKAKLNTLKELDNYDGLVLFR
                     ANLQDKNLHCSKQFLQIAKCKDQSEVEILAKDFSFKTKLCLDENLQGTIAFLNYENNG
                     FDFTPIRIKEAK"
     gene            complement(12687..12914)
                     /locus_tag="RJ266_001131"
     CDS             complement(12687..12914)
                     /locus_tag="RJ266_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase subunit E family
                     protein"
                     /protein_id="HDV7354877.1"
                     /translation="MRRVDLRKSKELFEDLAQIIKEAKQGEVLVVLFEIGDFSPVEKS
                     FSFVKEQGCELLNSLKFNQVDWTIVIKKERV"
     gene            complement(12911..14137)
                     /gene="nuoD"
                     /locus_tag="RJ266_001132"
     CDS             complement(12911..14137)
                     /gene="nuoD"
                     /locus_tag="RJ266_001132"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HDV7354878.1"
                     /translation="MQIPSKLKPYYENIAFEQEDSKMIINLGPQHPSAHGNLRLILEL
                     DGEQVVKARPCIGYMHRGMEKMAENMIYQEFIPTTDRMDYIAASANNYAYCAAVEKLC
                     GLEIPRRAAVIRMILLELNRITSHLLWLATHALDIGAMSVFLYCFREREYVLDLIEKY
                     CGARLTHSSMRIGGVMLDLPENYLEEMLAFCDKFPNDLKDYEDLLDDNRIWRLRTENV
                     GVVTKEQALNWGCTGVMLRGSGIKYDIRKEEPYLLYNEVEFGVPYATQGDSYARYKVY
                     MQEFRESLKILRQCAMLYKDTSPEILATHPEYVSASKEQILTQNYSLMQHFVLITQGL
                     KPPKGEVYVPTESPKGELGFFIHSDGTGRPYRLKARTPSYWHCAFFEEMLVGTYLADV
                     VAIMGNVNIVLGEIDR"
     gene            complement(14139..14933)
                     /locus_tag="RJ266_001133"
     CDS             complement(14139..14933)
                     /locus_tag="RJ266_001133"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HDV7354879.1"
                     /translation="MMRKYSDKKNAQTQNYYKDRFYHAPHTVKSDVNESVFKEDFEVL
                     KTQVEILNSFVELDFWVIEIKKEDNVKTLQMLKTLGYLSFTEASAIDFIADKNGFEVF
                     YQLLNLEKKLRVRIKTFVGVKERLQSVAHVFKGANWSEREIYDMFGIFIINHPNLKRI
                     LMPDDWFGHPLLKTYPLKGDEFARWYEIDKIFGKEYREVVGEEQRDSGFADDKDTLNF
                     ARLYHEVPKGGQKKEISFKQEYQEDEGVAFVKKVKRDEAKILEKRR"
     gene            complement(14930..15433)
                     /locus_tag="RJ266_001134"
     CDS             complement(14930..15433)
                     /locus_tag="RJ266_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HDV7354880.1"
                     /translation="MAEHQVNYASGLPVVLTSVDKLVQWGRSNSLWALSYGLACCAIE
                     MMAAGGSRYDFDRFGTIFRASPRHSEVMIIAGTLCKKHAEFTRRLYDQMPDPKWVISM
                     GSCANTGGMFNTYSTVQGVDRIIPVDIYVPGCAPRPESFQFALMILQKKIRKEKASRK
                     IAPKRLI"
     gene            complement(15415..15804)
                     /locus_tag="RJ266_001135"
     CDS             complement(15415..15804)
                     /locus_tag="RJ266_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase subunit 3"
                     /protein_id="HDV7354881.1"
                     /translation="MSHIDASHPYFGIFLMLVLASVIFFGLVFLASKIGNNFAAKNRK
                     KLGLGIYECGPIPVKQANKINSQFFIIALIFILLDIEVVFLFPWALIFKDLGWFGFLE
                     VFVFIVLLGVGFLYAYKKGAFAWQSIK"
BASE COUNT         5960 a         3017 c         1893 g         5044 t
ORIGIN      
        1 cttagataac tagccaaaaa gctagttatc tctaaattta cttattgatt taaaatttga
       61 tttttactct tacataaatt ctgccaattt gaagcacttt tgatttcaag acattgtttt
      121 aaactttctt tttcagcttg tatattttgc attctttcat aagttaaggc ttggatatat
      181 aaagctcttg ctctatcttc atctgaaagt tttaatttaa gtaaatctgt taaaacagct
      241 aaactttctt catttttatt gattttagtc aaagcatcaa gatatataaa ttctaaatta
      301 ggactaaaaa gatttatacc tttaaaattt tgatagtcaa tggccttagg tgcgtaagtt
      361 aaaatagttg tttgcatatt atgatcatta gcgtaagaaa gtaaagcatc ataagcttcc
      421 accatactaa aattcattgg aaaactttct aaaatttgca aaattttaat ggcttgatta
      481 tagtcattta aacgcaataa agataaaaat tgcaaataat aagccttaaa attctcatca
      541 tcacttttta aaattctaga attagctatg tctttagaaa ttttaatcac ctgaggatat
      601 tgtttattgt caaaaagaat agatgctttt tgaagaccat aaaatataga attttcatta
      661 taatttttat ctatataatc aagtgcttgt tcaacattag aagttctgat aagacaagct
      721 aacatttgtt ttttattctc aattttctga cctatatcat aagcactaaa acgcataaaa
      781 atatttgcag cattgataca attatcagct tttatcgcat tttttaaatc attaatggct
      841 gctttctcta aaaattgagt agcatttgga atttttttac tttctataag atctttataa
      901 gctaaaatag cactaaaatt tccctcttta taataaagtg caacatcttc atctaaagct
      961 ttatttgcaa tattctcatc tttatttgca tattgcttca ttaaatctgt ataacgctga
     1021 tgcaaaaagc ttgcattatt atcacctaaa gcaaagaata cctcatcact tgctttttta
     1081 atttcatcta aatacttacc atctaaataa tcatccatat acaaatcaag gtatttttta
     1141 gcatcactag atctgttagc atgtgataaa accaaggcta aatcttttaa agtttcttca
     1201 taacttggat caagtttgga cattttagca aaggcatctt cataaatact tgcacttata
     1261 tcaaattgtc ccttttgatt aaataattta gcaagttcta aagatcttgg aatatctttt
     1321 ccaaaatatt taggattggc ttttaaaatg gtattaatat attctatagc tttatttact
     1381 tgctcatttg aaagcaaatt ctttgccaaa ctcatagctg ctcttgcagc taaatctaaa
     1441 ttttttgtat taaaataagt attttcataa atatttacag ctttttcttt ttcatttaaa
     1501 ttataaatat agtctgcata atcaagtttt gataactgag taaaataatt attaggttgt
     1561 tcattatcca aaatcgacat tgtatactct acatcagcac gctgagctaa agcgatataa
     1621 gttcttaaca ttatatgtaa aacttctgaa aaatttttat cacttgtaaa agtacgcgtc
     1681 caatttttag catcatcaat catcttttct aaaatttgtt gatcacgcat gcttggatct
     1741 tgagtgtaaa gtttattttg agctcttaat ttataaagta taaattcact agtaaaaata
     1801 ctgccacgat atctattgat agcattttgt gcatcaatca ccacttgatt gtaattagcc
     1861 ttatcgtatt cttttttgat gcgtaaataa gtattgatat ctgcactttg aggaataaca
     1921 acaggatcag aatttaaatc caaagctcca acataaggca aactctcatg tggaaaattg
     1981 atattaaaat cgagtccatc atagtcttta ataggtgcta gttctggtgt aaaaataaaa
     2041 gtaaaagcct tacttttatg cgaacttgat gaactgagtt ctttatctat ataaatattt
     2101 tgagaagtgt caaacattct tgcttgtatt tttggcaaaa tgatcatttt aattttttga
     2161 gcttcttgta taaattttaa atcaaaagca gaaaaactct gatcttttaa tttattatca
     2221 accataccta caatatcaca ttcaaaatga acttttgctt cggtaataaa tttttgacat
     2281 gtaaattcta aatcattact cgcatgtaaa actgcaaaag cttgattatt ttcgcgaccc
     2341 gtgtttaaaa caagctcaaa agcaaaagca tttaaaaaac ttaataaaat taaaaataat
     2401 attctcataa aataattata gcaaaactct tataacatta acaatatagc aaaagtgctt
     2461 acacaaacac aaaaagctaa aataaaattt tgtataaaac taaacttaat attataaacc
     2521 ctatcatttt tcataaataa aacatgaatt aaaatcttta aatacgcata aagcataata
     2581 acagaagata aagccacaaa aagcgccaaa taccaatatc catttaaaat tactgtattt
     2641 aaaatcataa atttacccca aaatactcca aaaggcggaa tacctgctaa agaaagcaca
     2701 ctaatgctta aacaaaaagc aattaaaggt tttttaacca aaagcccatt taaactctca
     2761 taagaattat tctcataatt acttaaaatc ataaatacag cataatttgc aaaagcaaat
     2821 aaagtccaat atccaaaaat agcaagcaaa attccatcaa aattttgttc ttttaataaa
     2881 ggaatgcaag ctatcaaaac caaagaagaa tgcactacag aactataagc aaacattttt
     2941 ttgatattgt tttgacttag agccgcaaaa gcgcctataa gcatagaaaa aatcgctaga
     3001 actattatga tatattcaaa acctgtatta tttaaaaaat caaacaaacg aataaccaca
     3061 accaacatgg caacttttgg cacaactgaa ataaaagcaa ccaaatttgt atgtgctgca
     3121 taatacacat ctttaagcca aaaatgaaaa ggtgccaaag aaagcttgat tgcacaaaga
     3181 acaaaaatca tcactccagc acccaaaagc atgggatctt tttgaaactc attttttaac
     3241 gctaaattag cagataaatc taaagttcct gtttttaaat aaataaaagc tacagccata
     3301 acaaaaaacc cagctcctac agccgctata ctaaagtatt ttatcgcact tgaaatagca
     3361 ttatcacttc cacgcattgc tattaaagta taaagcgcta aagaagaact ttcaagtcct
     3421 ataaaaataa gtactaaatt tgagcttgaa accatcaaaa gcaaagatgc aatcataaat
     3481 aaaaataaag cataaaattc accttgattt tcttcttttt gcattaaaag atataaaaat
     3541 gaaaaacaca aaatcaccaa agaagcataa aatgaaacaa tatcattatt caaagtagct
     3601 aaaaaagctt ttgcatctaa accttgagca tttgcattat ttaaaatcaa aaaagcactt
     3661 acaatcaaag acaaagaact tatgccgata taaaacgatc gatgaaattt ccaaaaacca
     3721 gagcaaagca aaagaactat tgcagttgta attaaaaata aaaatggata agataagctt
     3781 atatttaaaa gttctaaatt taaaaaatta tttaacattt gcctctccta ttttagataa
     3841 aaaatctaaa gtattttgct caacagctct aatattcatt gtttttataa gattatccac
     3901 atctttttgt atcggcttta aaagtatatt tggcataagc cctagtccaa aaatcattac
     3961 tataatgcac acaagcgcta ctatttctct aaaacgtaaa gaaaaaccct ctataaagct
     4021 ttgtttttgc atgaaaaata tttttctaaa tactgcgaac atataaatcg ctcctaaaat
     4081 aatcaccaaa cctgccaaca aagcgtaaaa taaattaatc tttgctatac ctaaaagaat
     4141 taaaaactct cccacaaaag aaacagttaa aggcaaagaa acacttgcga gtaaaattaa
     4201 cataaagaaa attgaaaata aaggtgcttt tttggccaaa gaatggtaaa aagaaatatc
     4261 ataagtatga tatctttggt ataaaagttc aaccattaaa aataaagctc ccgttacaat
     4321 accgtgtgca aacatataaa aaaccgcgcc actaataccc aaagcattta aagaaaaaat
     4381 tcccaaaatc atcacaccaa gatgtgaaat agaactataa gcgatcaatt ctttaatatt
     4441 ttctgctcta taagcaatta aagcattata aacgatactc actatacata aagctacaat
     4501 taaaggcata aaatacacac tcgcatctgg aaaaagtggt aaacaaaaaa gtaaaaatcc
     4561 aaaaggagcc attttaaaaa ctacaagcat tacagaaaca agtacaggcg aatttgcata
     4621 aactttaggt gcccaagtat gaagtggaaa taaaggagct ttgatagcaa aagcgataaa
     4681 aaatgcccca aaaagtaaaa gttgctctgt aaaatttact gccgaggcat tatttttcca
     4741 aatttctaag tcaaaagtga agatatttaa aagttgataa ttcaaataag cttgataaat
     4801 caatgctaca agcattaaaa ttgaacccgc aaaagcatag ataaaaaatt tcacccctgc
     4861 tctaaaatct ttaccataaa ctcccataat atacaacaaa ggcaaaagag aaaattccca
     4921 aaaaacataa aataacaaac catcttttgc actaaaaagc cccataatag caaattctaa
     4981 aaagaatata caagatacaa gtgctttttg ttccagcttt aaaaataaaa agcttaaaaa
     5041 tatcatcaaa gaacttaaaa gcatcaatac aagtgcaata ctgtctactc ctacatgaaa
     5101 gctaaaaaat ttcaaaattt taaaagagag attataatca aagcttaccc cttgtaaaaa
     5161 atccgcaaaa atatccaaat ttaaagccaa aatcataaaa cttacaacaa cgctaaaaac
     5221 cttaacgcct ccacgattta aaagcaaaac cacaaaagca gaaattaaag gaaaaaatat
     5281 caaataattt agcattttac accatccata ccaaaatcaa caaaatcaca aaagctgcca
     5341 ccaaaaatct aagcattaag tttaagctgt ttggcataat cattttttgt gaaataattt
     5401 gagaatacaa agcaattttt tcaactattc tatcaaaaat ataaagatca caatgcttta
     5461 aaatcgcaca taaactttca tattttgaaa cgataaattg atgatagaat tgaggaataa
     5521 aataatcatt acttaaaagt ttgtgaattt tattttcttc aatactttcc ttaaaccaag
     5581 aatttttata agcaaaaata gccaaaatta cacccaaaat agctgccgca ctcgcacaaa
     5641 tcattacaat ttgattttgt gcatcaataa aaactaattt tatgcttaaa tattcaaaaa
     5701 aactatgttc aaaaaatcct gcaataatag ctaaaaccat caaaggactc atagccaaaa
     5761 gtgcgatttt acttgcttca tgtggatgtt cattgtgtct tgcaggggta aaaaatacca
     5821 acattaaaag tctaaagcta taaaatgctg ttaaaaaagc tgcgattaaa agcactaaaa
     5881 aaataccatg gtgaaaagaa atgaaagaat atcctaaaat caaatcttta gagaaaaatc
     5941 ctgcaaaagg ataaattcct gctaaagcta aagatcctat acacatcaaa atagctgtaa
     6001 attttaaagg tttaaaaagt ccacccattt ttttaatgtc taatttatca ttcatagcat
     6061 gcattacatt tccagcacct aagaaaagta aagatttaaa aaaagcatgt gtagctaagt
     6121 gaaataaagc tataccataa gccccaagtc ctgcagccac aaacatatat ccaagttgcg
     6181 ataaggtaga ataagcaata atgcgtttta aatccctagc caccaaagcc atagaggctg
     6241 caaaaatcgc tacaaaagct ccaagtaagg caataatata agaaacttca ggaactaaat
     6301 cataaagcgt acttgcacga attaccaaat aaacccccgc tgttaccatg gttgctgcat
     6361 ggattaatgc agaaacagga gttggccctg ccatagcatc agcaagccaa gtgtgaaaag
     6421 gaaattgtgc agattttccc atagccccta taaataaaca agttgcgatt aagatcaaag
     6481 cgttgtgatc taggctttgt gccatggaaa aaacttcatc atattttaaa gttcctgctt
     6541 gtaaataaag ccaaaaaatt cccaaaagca tacccaaatc cgcaatacga ttcataataa
     6601 aagcttcatt agctgcaaaa gaataagtat cgtttttata ccaaaaacct atgagcaacc
     6661 aagagcaaag cccaacgcct tcccaaccta cgaaaagtcc taagaaatta tcactcataa
     6721 ctaaaaaaag catagaaaag acaaaaagcc ccaaataagc aaaaaattta ttaaaacctt
     6781 catcatgagc catataaaaa atactataaa aatgcacaca agtagctaca atacctacaa
     6841 cactcatcat agtaagcgaa atagcatcta tatcaaagcc aaaatttact ccagcaaacc
     6901 attcaaacaa actcacatta aaagcttcat tacaaaaaaa caaatacaaa gaacaaaaag
     6961 cacttaaagc tattagaagc gaacaaatta tccctacaaa ttgttttttc tcactcaaag
     7021 caaaacaact tgcaaacaaa aaagctacaa aaggactaaa aagagaaatc aaagccaaat
     7081 tttgcatact aagcctccac ttcttttaag ctttttaatt ctaaagtgcc ttttcttcta
     7141 taccaaagca cacacaaagc tataccaaca gctacttcac aagccgctac acccatgata
     7201 aaaagcgcaa aaacctgtcc atttaaatca ttgtgcattt tagaagctgc tactaaagct
     7261 aaattagcgc tatttaataa aatttcactt gagataaaaa gcatgatgag attttgtctt
     7321 tttaaaatcc ctacaagtcc tatgacaaac attaaaatag cgacgaaaaa atacttttct
     7381 atcattgttt ttcctttgtt agctctttat gagtaagagt gatagcacag actaaagcaa
     7441 tcaaaagcaa aatagctata aactcaaaag ctaaaagata ttttgaaaaa atcgctaaag
     7501 ccagttgttt attaaaatca aacaaagcag gatcatttaa aggcaaatcc gtgctgatat
     7561 tttggtattt aaaacctata agcatggcca aaagtaaaat cgtacttaaa accaccaaag
     7621 taaaaaaact ttttttagct ttaagttgtt ctttaaattc tttagaagca tcaaaaaaca
     7681 tcatcgcaaa actataaagt ccaagtacag ctccactata aacaataatt tgtatcacgc
     7741 ctaaaaactc tgcatcaagt aaaaaataaa atcccgataa aaataccatt ccacccgcta
     7801 aagcagaaag agaataaagc atatttttac ttaaaaccgc aatgccaaaa aagcctaaaa
     7861 ccactacact aaaaaataca aaagccaaat tttctatcat ttattttctc cttgctcttg
     7921 tgtattttga ttttctaagg ctctttcaat catcacatca taataatttg gcgttttttt
     7981 aacccgcaaa tttgcatcct ttctaagact tcctgctcct tcaaattcaa cttgattttt
     8041 aagcttatca ataggagtta aaaaatcttg cttatagcca aaataagacc tttgctcggc
     8101 tgcattttca tactctgtgc catgcactat agcaagttca gggcaaacct cagcgcaaaa
     8161 accacaataa atacaacgcc ctaaattaat actataattt tctacttttt tacgcccatt
     8221 ttcatctaaa gaagtttcca ttctgataca attactaatg caaatttttt cgcaaagccc
     8281 acaacctata catctttcat tttcgctttc tataaaacgc atcaaacgat gaacagcacg
     8341 gtaacgattg tcaaacttta ccttttcaaa aggatattta atcgtagcgc tattatttct
     8401 cttaagcaat tctctcatca tcacaaaaag ccctacaaaa agctctagtt taacgcttct
     8461 acgcaaagct tgtgaaattt tctcccaagt gctaacagga gtttttcttt tctcatctac
     8521 taaataataa tttttcatat caaactccta taaaagaact gccaaagcag tgattaaaag
     8581 gtttaaaacc gctaaaggga ttaagatcaa atagcacatt ttcatcactt gatctggacg
     8641 caattgcgga aaagcagctc ttgcccaaaa ataccaaaag aaaataaaac ttgattttac
     8701 tatcatcata atccaaccag gaataatcca aaagctatta aaacccccta aaaacaaaag
     8761 agtgaccaaa atagctccag ctatcataga agtatattca cctatgaaaa acatacccca
     8821 tcttaaaccc gaatactccg ttccataacc cgctacaatt tcagcatcat tttccgtcaa
     8881 acaaagcgga gttctattag tctctataaa taaagcaatt ataaaaagca caaaagccaa
     8941 aggttgttta aaaataagcc aagaaaaaaa tccatcgctt tgataattgt taatatccac
     9001 caaagaaaaa gaacctacaa gcattataat agcaatcaaa gctaaagctc ctacgctttc
     9061 ataggaaata atcgatacaa gccctcttgc agcccctaaa atcgaccatt tattattact
     9121 tgcaagtcca cccaaaaaca ccgcataaaa gcaaagtcct gaagtgccga tgacaaaaag
     9181 caaagctaca ttgatatctg ccactatagg ctgaatcacc cttccaaata aagtaaattc
     9241 aggtagcata ggaatagctg ctaaagaaac aaaagcacaa atagcagaaa tcaaaggtgc
     9301 tatagcaaaa ataaattttt gcgaatttga agggattata tcttctttag taaaaagttt
     9361 tatcatatca gctacaagtt gaataagccc aaaaggccct accatatcag gccctatgcg
     9421 tctttgaaaa taagctaaaa cctttctttc agcataagtt gcaagacctg ctaaactcgc
     9481 aaatattgca atgataataa tacatttaat caaagtctct aaagcaaaaa aagcaaaatc
     9541 actcatggtt tgctcctaat ttttctaaat tcgccacaac aaatctttca tcaaaaaaac
     9601 ttagcgtgtc aagcttttca tcaaaatacg gcaagaaagc tccatttttt atgtccttat
     9661 ccacacgcac actaaggctt aattctttat cttttatttt aagttttaca agatctttat
     9721 cttttaaatt tttttcttta gctaaatttt cacttacagc taaaaaaatc acctcattaa
     9781 tcgcactagc acgatttgaa aatctaccaa attgatagct aggattagca ctataaagca
     9841 aaatttcatc ttcttttagg cttaaatttt caaaatttgg agagatgaaa tcttttttag
     9901 caacttgttt gaaacattct aaattaagct catatcccct tttgcaatcg cctgcattgg
     9961 tataaaaatt gtctaaatga tcaaaatcaa tcggagaaaa acctttattt atagggagtc
    10021 tcttagtata atttatagta tattcctcat caaaacctaa agcattagcc aaatcattta
    10081 aaaaatatcc cttaaattct aaagcagcgt tagttggtac cactctttta tcataattta
    10141 aaaaagttcc ttcttgctga tttaaactcg cactagctaa atttgcatgc tcttcataag
    10201 aaaaactaaa atcacctttt tcattgtagc ctaaagtctt gccttcttgc gtgtttttat
    10261 ccaaatcaca aattatagcc acacctaagg tattagtatg cgtaggattt aaaaagactt
    10321 taaaaggagt ggtattttgg atcaaagcaa gtaatttagc aagttttttc gcatttttat
    10381 gaaaataaaa atcactccct acaacaagag taaaatttgc ttttttaagc aataaatctt
    10441 ctaatttatc ttcatctatg cctaaatttt tagcaaaaat agagcgttgc acttctatga
    10501 tttttttcac tttcttaggc acgacttttt ttacttcttt ttgaatttca ttgccttctt
    10561 catctttttc tatgacttgt tctacaactt cttcgttgat actttcttct atttctttat
    10621 tttcactaat aaaaaactct gctaaatgag ttttgatacc ttcatcttgg ctaaattttt
    10681 gaagtaaaaa atataaaatt tgctcttcat cgccattttt atgaatgtgc gggataaaat
    10741 ttttagaata ttttgctata cccatatctt ccataggatg aaaataaagc cctgagcctt
    10801 tattcatcac taaagcatta ttgattttat agctaagcgt tggagcatca tatcttaaaa
    10861 gcattccagc tacaaccaaa aaatcacttt ttgttatatc ttgagtatta gcgctataaa
    10921 actcaccaga attagcgata aattcttgta aaaattcttt aaatttcaaa gcttcttcat
    10981 tgatcaaaga aagattaaat ttctttttta aattttgcaa aatcaaagct tcttcattgg
    11041 taataaaact attaaattta atgtttttaa tttcattttt ctcaaaaagt tccacaagtt
    11101 ctttaaaggc tttttcgtct ttatccgcct cattttgcgt atcaaaagca aatcttgcag
    11161 ccttatttaa actcgcaaag gcaaaatcat tactcactcg ataaattttt tctttttgat
    11221 tgctaatgcc gctttgctta atatcataat acatcaactc acaatcgctt gaatgcggat
    11281 ttgaagcagg gattctttta agttcccaaa tatttgaagt atactgaaat ttcgaaccta
    11341 tcaaagctcc tgttggacac acgcttgtac attctccaca aaatgaacaa tcaagcgtat
    11401 caccatttgc aggacctatc aaactttttt gaaatttagt ccaaatcgca taagcatctt
    11461 ttcccatgct ctctttaaag ctattatcca cactatctcc gccacgagga acagtcttta
    11521 aagcactttc tccgatttta tccttacaaa ctgtaataca acgctcacat actatgcaaa
    11581 gcgcgggatc gtaattaatc attccccaat gtttatgtgg tttatgcgtg tctttaatcc
    11641 aatgtttttg aacatttaca cgacttttat gagtaaaatt ttgcaattca cactcgcctg
    11701 atttatcgca aactccacat tctaaaggat gattgataca ataagcttgc atgatctcat
    11761 ttctttcatc ccaaagattt tgtaaatcac tttctacaac cataccctct tttgctttag
    11821 tattgcaaga atataccttt ttaccatcag cttcaaccat acacatacga caagccaaag
    11881 taggactaca gcccgaaaga tagcaaatcg ctgggataaa aatatcattt cttcttgcta
    11941 tatttaagat atattcgcct tcttcaaagg cgcaatctat accattaatc ttaactgtca
    12001 ttttgcttcc tttatgcgaa ttggagtaaa atcaaaacca ttattttcat aatttaaaaa
    12061 agctatggtg ccttgtaaat tttcatctaa acaaagctta gttttaaaac taaaatcttt
    12121 agctaaaatt tcaacttcac tttgatcttt gcattttgca atttgtaaaa attgctttga
    12181 acaatgtaaa tttttatctt gcaaatttgc tctaaaaagc actaacccgt cataattatc
    12241 gagttctttt agggtgttta attttgcctt tttaaaatcg cattcttctt catcgctatc
    12301 taaaatcttt aatccatatt ttacacttag gaaattcaaa aaatatttga tattttcact
    12361 atctttataa gaatggatat ttttatctat aattaaatac ttaacctctt ttaaaaaagc
    12421 aagcacttcg cctgcttctt cctctccaaa acaagattca gcacttaaat atccctcatc
    12481 taaatcgcaa aattgtcctt catcgcttaa tttacaaagc aaggccaaaa caaaactcaa
    12541 acttgcaatt tcgcatttgt aaaatttagc ttttaagttt ttatcttcca aacaagaaat
    12601 attaatgcta tttacaccta ttttttcaca taaatttttg tttttaaggc ttggcatatc
    12661 taaaaaacaa agagcattat cataaatcat accctctcct tttttataac aatagtccaa
    12721 tcgacttgat taaatttcaa agaatttaaa agctcacagc cttgttcttt tacaaaagaa
    12781 aaactttttt caacaggaga aaaatcgccg atttcaaaaa gcaccactaa aacctcacct
    12841 tgttttgctt cttttatgat ttgtgctaaa tcttcaaaaa gctctttgct ttttcttaaa
    12901 tctacccttc tcatcgatct atctcaccta aaactatatt tacattaccc ataatggcta
    12961 caacatcagc taaataagta cctacaagca tttcttcaaa aaacgcacaa tgccaataac
    13021 taggcgttct agcctttaaa cgataaggtc ttcctgtacc atcactatgg ataaaaaagc
    13081 caagctcacc ttttggactt tcagtaggca cataaacttc gcctttaggg ggttttaaac
    13141 cttgagtgat taaaacaaaa tgctgcatta aagaataatt ctgcgttaaa atttgttcct
    13201 ttgaagcact tacatactca ggatgcgtag ctaaaatttc aggcgaagta tctttataaa
    13261 gcatggcaca ttgtctaagg attttcaaac tttcacgaaa ttcttgcata taaactttat
    13321 atcttgcata agaatcccct tgcgtagcat aaggcacacc aaattcaact tcattataaa
    13381 gcaaataagg ctcttctttg cgtatatcgt attttatgcc acttcctctt aacatcacac
    13441 ccgtacaacc ccaatttaag gcttgttctt tagtaaccac acctacattt tcagttctta
    13501 aacgccaaat tctattatca tctaaaagat cttcataatc ttttaaatca tttggaaatt
    13561 tatcgcaaaa tgcaagcatt tcttctaaat aattctcagg taaatcaagc ataaccccgc
    13621 ctattctcat agaagaatgc gtaagccttg caccgcaata cttttctatc aaatccaaaa
    13681 catactctcg ttctctaaaa cagtataaaa atacactcat cgcaccaata tcaagcgcat
    13741 gagtagcaag ccaaagcaaa tgcgatgtga tacggtttaa ttctaaaagt atcatgcgta
    13801 tcactgcggc acggcgtgga atctctaaac cacaaagctt ttcaaccgct gcacaataag
    13861 cataattatt cgctgaagca gcgatatagt ccattctatc agtagtagga ataaattctt
    13921 gataaatcat attttcagcc attttttcca taccacgatg catataacct atacaaggac
    13981 gcgcttttac aacttgctct ccatcgagtt ctaaaataag acgcaaattt ccatgcgctg
    14041 aaggatgttg agggcctaag ttgataatca tttttgagtc ttcttgctca aaagctatat
    14101 tttcataata aggttttaac ttgctaggaa tttgcatttt aacgcctttt ctctaaaatt
    14161 tttgcttcat cacgttttac tttttttaca aaagccacac cttcatcttc ttgatattct
    14221 tgtttaaagg aaatttcctt cttttgacca ccttttggca cttcatggta aagtcttgca
    14281 aaatttagcg tatctttatc atcagcaaaa ccagaatctc tttgttcttc gcccactact
    14341 tcacgatatt ctttgccaaa aattttatca atctcatacc atcttgcaaa ctcatcgccc
    14401 tttaaaggat aagttttcaa aagcggatgt ccaaaccaat catcaggcat taaaatgcgt
    14461 tttaaattag gatgatttat gatgaaaatt ccaaacatat cataaatttc tctctcactc
    14521 caatttgccc ctttaaaaac atgagccacg ctttgcaaac gctcttttac gcctacaaaa
    14581 gtttttattc tcactcttaa ttttttttct aaatttaaaa gctgataaaa cacttcaaaa
    14641 ccatttttat ctgctataaa atcaatagca cttgcttctg taaaacttaa ataacctaaa
    14701 gttttaagca tttgcaaggt tttaacattg tcttcttttt taatttctat tacccaaaaa
    14761 tcaagctcta caaaggaatt taaaatttct acttgagttt ttaaaacttc aaaatcctct
    14821 ttaaaaacac tttcattaac atcagatttt acagtgtgtg gtgcgtgata aaatctatct
    14881 ttgtagtaat tttgagtttg agcatttttt ttatcgctat actttctcat catatcaacc
    14941 ttttaggtgc gatcttgcga cttgcttttt ctttgcgaat ctttttttgc aaaatcatca
    15001 aagcaaactg aaaactttct gggcgtggag cacagcctgg cacataaata tctacaggta
    15061 taattctatc cactccttga acagtagaat aagtattaaa cataccgcct gtattggcac
    15121 aacttcccat agaaatcacc catttaggat caggcatttg atcataaagt cttcttgtaa
    15181 attcagcgtg ctttttacac aaagttcctg cgataatcat cacttcactg tggcgtggtg
    15241 aagctctaaa aatcgttcca aatctatcaa aatcatatct tgaaccccca gccgccatca
    15301 tctcaatcgc acaacaggca agtccataag ataaagccca taaagaatta ctcctgcccc
    15361 attgaactag cttatccaca ctggttaaaa ctacgggcaa accacttgca taatttactt
    15421 gatgctctgc catgcaaacg ctcctttttt ataagcatat aaaaatccaa ctcctaaaag
    15481 tacgataaaa acaaaaactt ctaaaaatcc aaaccaacct aaatctttaa aaatcaaagc
    15541 ccaaggaaat aaaaacacaa cttctatatc caaaagtatg aagattaagg cgatgatgaa
    15601 aaattgagag ttaatcttgt tagcttgttt aacaggaata ggaccacatt cataaattcc
    15661 aagtcctaat tttttgcgat tttttgcggc aaaattatta ccgatttttg aagctaaaaa
    15721 aaccagtcca aaaaaaataa cactagcaag tactagcatt aaaaaaatac caaaataagg
    15781 atgcgaagca tctatatgag acatttattc tcctttttta aagcacttta atcactccac
    15841 aacaaaaatt aaatttacac ttttctttat tttactctaa actttctata ttgaaactta
    15901 tattaaaaaa tatt
//
LOCUS       DAPIWB010000043        14380 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.044, whole genome shotgun sequence.
ACCESSION   DAPIWB010000043 DAPIWB010000000
VERSION     DAPIWB010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14380)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14380)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14380
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.044"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            74..1498
                     /locus_tag="RJ266_001136"
     CDS             74..1498
                     /locus_tag="RJ266_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDV7354882.1"
                     /translation="MDFLTSLSEGGQFAIQIIIVLICLFYGAKKGGIALGLLGGIGIL
                     MLVFAFHIKPGKPAIDVMLTILAVVVASATLQASGGLDVMLQIAERILRRNPKFLTIL
                     APFVTCFLTILCGTGHVVYTIMPIIYDIAIKNGIRPERPMAAASISSQMGIIASPVSV
                     AVVSLTALLLNANHKLAGFDGYINLLQITIPSTLFGVLCIGIFSWFRGKDLDKDEVFQ
                     EKLKDPEFKKYVYGDSKTLLGVKLPKSNWVAMWIFLGAIALVALLGVFDFLRPNWGQV
                     VKNGIPQVDALGNPKMDVLSMVSVIQMFMLLAGSLIIIFTKTDAKKIGSNEIFKSGMI
                     ALVAVFGISWMADTMFAVHTPMMKAALGDIVKEHPWTYAVMLLLISKFVNSQAAAISA
                     FVPLALGIGVEPGVIVAFAAACYGYYILPTYPSDLATIQFDRSGTTHIGKFVINHSFI
                     LPGLIGVITSCIAGYFIAMAAGYL"
     gene            1640..1827
                     /gene="kdpF"
                     /locus_tag="RJ266_001137"
                     /pseudo
     CDS             1640..1827
                     /gene="kdpF"
                     /locus_tag="RJ266_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344095.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
     gene            1837..3528
                     /gene="kdpA"
                     /locus_tag="RJ266_001138"
     CDS             1837..3528
                     /gene="kdpA"
                     /locus_tag="RJ266_001138"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004305525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit A"
                     /protein_id="HDV7354883.1"
                     /translation="MLEILITLIIAFILALIFGNYLYKIASCKKTIFDFIFNPIDNLI
                     YKICAIDRKNMTWQKYSLHLIAFNALVAIFSFVIFYLQDKLFLNPNSINSMKGDLNLN
                     TVISFITNTNLQHYSGESALSLLSQNTGILLAMFVSSASGYSACMAFCRALCGMQMGN
                     FYEDFTRIITRLMLPLSFILAVIFISEGVVQNYHANFSVLTLENKFQSIATGPVAALE
                     SIKHLGTNGGGFFGANSSMPFENPTSLTNFLQILSMMLIPSACVVAFGLMVYHRKERQ
                     GFALMGKEGGVIFGAMGIIFIISLLLIYFSEKMSNPNLDSLGLNANLGNLEGKEIRFG
                     TDDSSLFSAVTTAFTTGSVNNMHDSLNPLSISATLLNMMLNVAFGGEGVGLMNMIIYV
                     LLTVFICALMIGRTPEFLGKKIESAQMKLIALVILIHPLLILVLSALAVVFAKDSISN
                     PSFHGLAQILYEFSSSAANNGSGLEGLKDDNLFWNLSTAFAMFCGRYLVLIAQLAIAG
                     SLLAKNTQENTANSLKTDNLTFMFVLVCIIYIFAALTFFPVLTLSSVAEYLSLWH"
     gene            3538..5583
                     /gene="kdpB"
                     /locus_tag="RJ266_001139"
     CDS             3538..5583
                     /gene="kdpB"
                     /locus_tag="RJ266_001139"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HDV7354884.1"
                     /translation="MSKKQNKLITKEILNNAIKGAFLKFDPRFMVKNPVMFMVEVGLI
                     LTLILSIFPTLFNGNSDERIYNILITFILFITLFFANFAESIAEGRGKAQAATLRQSK
                     KDSKARRIKSDGSEEMLNSSELKIGDIVLVKAGELIPNDGEIIEGAASVDESAITGES
                     APVMREAGGDFSSVTGGTTVLTDFLKIKILVGAGESFLDKMINLVEGAARQKTPNEIA
                     LNTLLIVLSLSFLVVVVSLYPFMQFLGVSLPISWLVALLVCLIPTTIGGLLSAIGIAG
                     MDRVTRFNVIALSGKAVESCGDVDTMILDKTGTITFGNRLANEFYEVQGISKEEMIKA
                     CVLSSLKDETPEGKSIVALAQKMGYELEGNDIKEFIEFSAQNRMSGVDLQDNTKIRKG
                     AFDAIRAYISKMNGKIPSDLETKVMEISNLGGTPLVVCKNEKILGVIYLKDTVKPGLK
                     ERFDELRKMGIKTLMCTGDNPLTAATIAKEAGLDGFIAECKPEDKIEAIKKEQAQGKI
                     VAMTGDGTNDAPALAQADVGIAMNSGTQAAKEAANMIDLDSNPTKILEVVEIGKGLLI
                     TRGSLTTFSMANDIAKYFAILPAMFSVVLPQMQILNIMHLATPQSAILSALIFNAIII
                     PLLIPIAMRGVKFKPMKSEHLLLRNLSIYGLGGMIAPFIGIKIIDIPTAWILRILGV"
     gene            5585..6193
                     /gene="kdpC"
                     /locus_tag="RJ266_001140"
     CDS             5585..6193
                     /gene="kdpC"
                     /locus_tag="RJ266_001140"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002861367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpC"
                     /protein_id="HDV7354885.1"
                     /translation="MLRTLLSFFVIMLILCTFVYPFALNTVAKFIFPYQSSGSLVDKE
                     GRPTLDISKAVGSKLLGQDFNKPYFLHSRASVSNYNTSDTNESSVSSGGFNYAMSNPA
                     LKERVQKDLQKFLDENPQITKEQIPLDLLSASGSGLDPHISLQAALVQIPRISQSSKI
                     TKEELEKIIQENTESKFLGIFGEEKVNVLAVNIAIVKAMKKE"
     gene            6196..8127
                     /locus_tag="RJ266_001141"
     CDS             6196..8127
                     /locus_tag="RJ266_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase KdpD"
                     /protein_id="HDV7354886.1"
                     /translation="MQRQSPEQILKKLEVKAKEEEKNKLAKLKIFLGYAAGSGKTYAM
                     LSEARTLRDNGVDVVLGYIEPHDRPETMALTQGFESIANLEIPYKNIVLKEFDLDATL
                     KRKPALVLVDELAHTNAKGLRNEKRFQDIEELLKAGIDVYTTLNIQHLESLNDLVANI
                     SKIEVKERIPDRIFDEADQVELVDIEPNKLLKRMQDGKIYKEKQAKLALENFFRQERL
                     IALREIALRRLASRVNLRASEQRLINDDLAYHTGEHILVCINASNAKVIRAAARLALA
                     FHAKLSALYIKNPNIKEEKALEENIELAKSFDAEIISVYDDDIARQIAEYSSLSNVSK
                     IVLGKNKDKKKFKEEIFEAVAKKAPNIDLYLVNENQISTPKIRSKKGFDFLGFLKITG
                     VLLLATFIAFVFHKFNTQPSNIVMIFILAVFASSFISDNKIFAFYSSLVSVLIYNFFF
                     LEPIFSLKVHDNGNIITFTTMFIVGFLTAVFTRRLKLQSKELTKRAYRTAILLENSEK
                     LARVKSKQELWEQLGNQALKLLNLPIIIYPINKNNILSKPLLFFNDDKQMLKNCFSAD
                     EIAIAQWVATNKERAGVCTNTLPNANAMYLPIEDGEKTKGVIGIVLKEKRPLQDFQYE
                     ILSALLNEAGVRTRDIFLL"
     gene            complement(8122..10095)
                     /gene="uvrB"
                     /locus_tag="RJ266_001142"
     CDS             complement(8122..10095)
                     /gene="uvrB"
                     /locus_tag="RJ266_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HDV7354887.1"
                     /translation="MLELTSEFKPSPDQQEAIKGIVKSIKKGNKYQTLLGVTGSGKTF
                     TMANVIKELNIPTLIMSHNKSLCAQLYSEFKGFFSKNHVEYFISYYDYYQPEAYIPRT
                     DVFIEKDSSTNEDLERLRLSATASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFEL
                     GMQISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDEL
                     DAMYHYNVLENKKGKDLKRFILYPTSQFSVGETRLKQAIKDIKAELNERLAYFEHENK
                     LVEYQRLKQRVEFDLEMLTSTGMCKGVENYARHLTGLKEGDTPYTLFDYFAIKDRKFL
                     VIVDESHVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKNCQFLFV
                     SATPAPLELELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDEAKKVIQRNERVL
                     VTVLTKKLAEELTRYYLELGIKVKYMHSDIDAIERNEIIRGLRSGAFDMLIGINLLRE
                     GLDLPEVSLIAIMDADKEGFLRSTTSLIQTMGRAARNVNGKVLLFCKKITKSMQEAMD
                     TTNERRKLQMAYNKKYNITPTSVKRHIEESLKNEEDLGEIYRKGKKLEKMPASERAKL
                     VKELRKQMLEAAKALEFEKAAAIRDEINKLRDL"
     gene            10249..10479
                     /locus_tag="RJ266_001143"
     CDS             10249..10479
                     /locus_tag="RJ266_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354888.1"
                     /translation="MFDEKIINTMTDKVNELIEKYNEVCEANEALRNELVSVKAQNEA
                     KSNQIMRLEEELKSRNIESEDIYKKIEAVLGR"
     gene            10469..10711
                     /locus_tag="RJ266_001144"
     CDS             10469..10711
                     /locus_tag="RJ266_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354889.1"
                     /translation="MADNLKQVIVNVNAKDFIVKCSEEFANFLEDDIALISGGTKKIE
                     LKRFVDAFVKKSYENYILERELKKLIKAINEELPAK"
     gene            10708..11145
                     /locus_tag="RJ266_001145"
     CDS             10708..11145
                     /locus_tag="RJ266_001145"
                     /inference="COORDINATES: protein motif:HMM:NF019575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDV7354890.1"
                     /translation="MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDY
                     EMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEKLFYCLNDCDYSLLDTPIYSDFK
                     SWIKIGKNRYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI"
     gene            11127..12980
                     /locus_tag="RJ266_001146"
     CDS             11127..12980
                     /locus_tag="RJ266_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HDV7354891.1"
                     /translation="MQRSDIRYYELAICGLYLDNLTFHSFDEIKPLTQVLVDLKTKKN
                     LKAIVLKECQKPDFKTVEIKEITEYFLTPLQFELANFIVYYYASKLGFVLGFFETSPK
                     YECQKMFFKDTPKLSNQQQNALSFLQKENNSLLFADTGSGKTEIYISLIKECLEQGKQ
                     ALLLMPEIALTPQMKKRLEVYFKDNFFLWHSKISKKKKQEYLERFCKGEVLLVAGARS
                     ALFLPFRNLGLIVVDEEHDNSYKASNQPFINARNLALFLGQKNNIKVVLGSATPSLTS
                     FYKQKSFRLKGTFFESKKHFLYDENELGITPMLLSELEKSLKHQKQAIVFLPTRANFR
                     QIICKDCGETIKCPFCSIAMSMHKKKNVLKCHYCNYTSLIEQNCPSCKGEMLEARKMG
                     TAELLELLQNALPLAKIAKFDSDEITSVKKLNTILKDFNENKIDILIGTSMLAKGHDY
                     HSVDLSVILGLDEYLLRPSFRASEETLALAMQVAGRAGRKGEARVLLQTKNRAFFERY
                     IENYDAFLKDELENRKDLYPPFKRLLRVLIEDKDQKSAQKLCEKFASQFRNIKQVELV
                     GYGICGVEMLYGKYRFYLLLRSENHKALVAIENYILQFKNASADIDPIDFV"
     gene            complement(12990..>14380)
                     /locus_tag="RJ266_001147"
     CDS             complement(12990..>14380)
                     /locus_tag="RJ266_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2972 domain-containing protein"
                     /protein_id="HDV7354892.1"
                     /translation="NLLLYIKNNLTPTLAQILLQALKNSNNEKFFTFVLKNIETICTW
                     LNSNEFRDRYLSTKHPYPPLINHNFIEIDSSRHCAELAWDLNLPLPKHYKFIYISPHG
                     VGAAAFLRYLNQCCDVTCFASWVLPPDSKERYCINYMCLNDNTIAQYAINISEINLPY
                     FDKYLSLLDFNSKIICGVRDPIGLLKHSWGRDWSKVLRNYPPEFNLTYDWRYYINYLT
                     HQNHKIKIDINELQQGVFIISYLLKYFNKDNVCYLDMEEIRQSKAFDTMNLLAINFNF
                     TPPHKDKLDLFKIKEFRGYIRYLFPITLYANSKDINNTFYLNTPKNNKNFNIDRTSSI
                     PIILDRKHINHEKIDIIQEIIKNDLCNDMSVYIDKNDFKQLEQNNLLFSTIKHYLYDF
                     LYQIKITIDETESKMMKEKDVIDYFIKNKSLIYTFFNIFENELNHLKQTHPHIIDSWK
                     YYKEFEKIYKDK"
BASE COUNT         4777 a         1882 c         2532 g         5189 t
ORIGIN      
        1 aatattattc tttaatttaa aaatgtgata caataataac tgtttttaaa tattaatttt
       61 caaaggagtt aaaatggact ttttaacaag ccttagtgag ggagggcaat ttgcaatcca
      121 aatcattatc gttttaattt gtctttttta cggtgcaaaa aaaggcggca tagcgcttgg
      181 tttacttggt ggtataggta ttttaatgct tgtatttgct tttcatataa agcctggaaa
      241 accagccata gatgttatgc ttacgatttt agcggtagtg gttgcgagtg caactttgca
      301 agcaagtggt ggtttggatg ttatgcttca aatagcagaa agaattttaa gacgcaatcc
      361 taagttttta acaatattag cgccttttgt aacctgcttt ttgactatac tttgtggaac
      421 aggacatgtg gtttatacta ttatgcctat tatttatgat atagcgatta aaaacggtat
      481 tcgtcctgag cgtccaatgg cggcagcttc tatatcatca caaatgggta ttattgcatc
      541 tcctgtatct gtggctgttg tgagtttgac tgctttgctt ttaaatgcta atcataaatt
      601 agcaggtttt gatggttata ttaatcttct tcaaattact atacctagta cattatttgg
      661 tgtattgtgt ataggaattt tttcttggtt tagaggaaaa gatttggata aagatgaagt
      721 atttcaagaa aaacttaaag atcctgaatt taaaaaatat gtttatgggg attctaaaac
      781 acttttaggt gttaaacttc caaaaagcaa ttgggttgca atgtggattt tcttaggagc
      841 tattgcttta gtggctttat taggtgtatt tgatttcttg cgtccaaact ggggacaagt
      901 tgtaaaaaat ggcattcctc aagtagatgc tttaggcaat cctaaaatgg atgttttatc
      961 catggtttca gttattcaga tgtttatgct tttagcaggt tctttgatta tcatctttac
     1021 taaaacagat gcaaagaaaa tcggctctaa tgaaattttt aaatcaggta tgatagcact
     1081 tgttgcggtt tttggaattt cttggatggc tgatactatg tttgcagttc acactcctat
     1141 gatgaaagca gcacttggag atatagtaaa agagcatcct tggacttatg ctgtaatgct
     1201 tcttttaatt tcaaaatttg taaactctca agcagcagct atttcggctt ttgttccttt
     1261 ggctttagga attggtgttg aacctggtgt gattgttgct tttgcggctg cttgttatgg
     1321 gtattatatt ttaccaactt atccaagcga tttagctact atacaatttg acagatcagg
     1381 tactactcat attggtaaat ttgttatcaa tcatagtttt attttaccag gtcttatagg
     1441 tgtgatcact tcttgtatag caggatattt tatcgctatg gcagcaggtt atctttaaca
     1501 atttttagca ggatttttcc tgctaaattc ttcatttgtc tttttattta atatagataa
     1561 aaattataaa taaatcataa aattagtatt aatcaaaata taagcttaac aaggatagaa
     1621 taaatcctat tttgaatcaa tgagaaaggg ctatcctatg gatgttatct ttgctttgct
     1681 tctgctttta gcttttggta gtttatggtt ttttatccgt ttttgtgaaa ttcaaactag
     1741 gacacgcgga tgatattttt actagtttta agcttaatac ttgctcttta tttattttat
     1801 gctctattat atcctgaaaa attttaaagg aaaaatatgc tagaaatttt aataacactg
     1861 attatagctt ttatattggc tttaattttt ggaaattatc tttataaaat tgcaagctgt
     1921 aaaaaaacta tttttgattt tatttttaat cctattgata acttaattta taaaatttgt
     1981 gcaattgata gaaaaaatat gacttggcaa aaatattctt tgcatttaat tgcttttaat
     2041 gccttagtgg ccattttttc tttcgtgatt ttttatttac aagataaact ttttttaaat
     2101 cccaattcga taaattctat gaaaggggat ttgaatttaa atactgtaat tagttttatt
     2161 acaaatacaa accttcagca ttatagtgga gagagtgctt taagtttgct ttctcaaaat
     2221 acaggcattt tacttgctat gtttgtttca agtgcgagtg gatattctgc ttgtatggct
     2281 ttttgtcgtg ctttatgtgg tatgcaaatg ggaaattttt atgaagattt tacgcgtatt
     2341 attacgcgtt tgatgttgcc tttaagtttt attttggctg taatttttat ctctgaaggc
     2401 gtggtgcaaa actatcacgc aaattttagc gtgcttactt tagaaaataa atttcaaagc
     2461 attgccacag gtcctgttgc agctcttgag tctataaaac atttagggac aaatgggggt
     2521 ggtttttttg gtgctaattc aagcatgcct tttgaaaatc ctacttcact tacaaatttt
     2581 ttacaaattt tatccatgat gcttattcct agtgcctgtg ttgtagcttt tggattgatg
     2641 gtttatcata gaaaagaaag acaaggtttt gctcttatgg gaaaagaagg gggagttatt
     2701 tttggtgcaa tggggattat ttttatcatt tctttgcttt taatttattt tagcgaaaaa
     2761 atgtcaaatc caaatttgga ttctttgggt ttaaatgcaa atttgggaaa tttagaaggt
     2821 aaagaaataa gatttggcac agatgattcg agtttgttta gtgctgtaac tactgctttt
     2881 actacaggaa gcgtcaataa tatgcacgat agtttaaatc ctttaagcat cagtgctact
     2941 ttgctaaata tgatgttaaa tgtagctttc ggtggcgaag gagtagggct tatgaatatg
     3001 attatttatg tgcttttaac cgtgtttatt tgtgcattaa tgataggcag aactccagaa
     3061 ttcttgggta aaaaaataga aagcgcacaa atgaagctta tagctttggt aattcttatc
     3121 catcctttat taatccttgt tttaagtgca ttagctgttg tttttgcaaa agatagtata
     3181 agcaatccta gctttcatgg cttggctcaa attttgtatg aatttagttc ttcggcagca
     3241 aataatggtt caggacttga aggtttaaaa gatgataatt tattttggaa tttaagtaca
     3301 gcttttgcta tgttttgtgg gcgttatttg gttttaatag ctcagcttgc tatagctgga
     3361 tcgcttttgg ctaaaaatac acaagaaaat actgcaaatt ctttaaaaac ggataattta
     3421 acttttatgt ttgtgcttgt ttgtattata tatatttttg ctgcacttac tttttttcca
     3481 gtgcttactt tatcaagcgt tgcagaatat ttatctttat ggcattaagg agagtcaatg
     3541 tctaaaaaac aaaataaact cattacaaaa gaaattttaa ataatgccat aaaaggagca
     3601 tttttaaaat ttgatccacg ctttatggta aaaaatcctg ttatgtttat ggtggaagtt
     3661 ggattgattc ttactttgat tttaagtatt tttcctactt tgtttaatgg aaattctgat
     3721 gaaagaattt ataacatctt aatcactttt attttattta taaccttgtt ttttgcaaat
     3781 tttgcagaaa gtattgcaga aggaaggggt aaagcccaag cagctacctt aagacaaagc
     3841 aaaaaggatt ctaaagctag acgcataaaa agtgatggca gtgaagaaat gcttaattct
     3901 agcgagttaa aaataggtga tatagtttta gttaaagcag gtgaacttat acctaatgat
     3961 ggagaaatta tagaaggtgc tgcaagtgtt gatgaatcag ctattacagg tgaaagtgct
     4021 cctgttatgc gtgaagcggg cggtgatttt tcttctgtta caggtgggac tacggtttta
     4081 actgattttt taaagattaa aattttagtt ggagctgggg aaagtttttt agataaaatg
     4141 atcaatcttg tagaaggtgc tgcgcgtcaa aaaactccaa atgaaattgc tcttaatact
     4201 cttttaattg ttcttagttt gagttttttg gtggtggttg taagtttata tccttttatg
     4261 caatttttag gcgtgagttt gcctatttcg tggttagtag cattgcttgt atgtcttatt
     4321 cctacaacta taggggggct tttatcagct ataggaatag caggtatgga cagggtaacg
     4381 cgttttaatg tgatcgcact ttcaggcaag gctgttgaaa gttgtggtga tgttgatact
     4441 atgattttgg ataaaacagg aacgattact tttggaaacc gtttggcaaa tgaattttat
     4501 gaagtccaag gtataagtaa agaagaaatg attaaagctt gtgttttatc ctctttaaaa
     4561 gatgaaactc cagaaggtaa aagcatagtt gcattggctc aaaaaatggg ttatgaatta
     4621 gaaggtaatg atattaaaga atttatcgaa tttagcgctc aaaatagaat gagtggtgtg
     4681 gatttacaag ataatacaaa aattcgcaaa ggtgcttttg atgctataag agcttatata
     4741 agcaaaatga atggaaaaat tcctagcgat ttagaaacta aggtaatgga aatttcaaat
     4801 cttggtggca ctcctttggt agtgtgtaaa aatgaaaaaa ttttaggagt gatttatcta
     4861 aaggatacag taaaaccagg acttaaagag cgctttgatg agcttagaaa aatgggcata
     4921 aaaactttaa tgtgtaccgg agataatcct ttaacggcag ctactatagc caaagaagca
     4981 gggcttgatg gatttatagc agaatgcaag cctgaagata aaatagaagc cattaaaaaa
     5041 gaacaagccc aaggtaagat agtagccatg acaggagatg gaaccaatga tgctccagct
     5101 cttgcacaag ctgatgtagg tatagctatg aactcaggaa ctcaagcggc caaagaagca
     5161 gccaatatga tagatcttga ttctaatcct actaaaattt tagaagtagt tgaaatagga
     5221 aaaggtttgc ttattactag gggtagtctt acaactttta gtatggcaaa tgatattgct
     5281 aagtattttg ctattttacc tgctatgttt agtgtggttt tacctcaaat gcaaatttta
     5341 aatattatgc atttggctac cccgcaaagc gctattttat cagcacttat ttttaatgct
     5401 attattatac ctttgctcat acctattgct atgcgtggag ttaaatttaa gcctatgaaa
     5461 agtgagcatt tgcttttaag aaatttgagt atttatggtt taggtggtat gatagcacct
     5521 tttataggga taaaaataat tgatattcct acagcttgga tacttagaat tttaggagtg
     5581 tgatatgctt agaactttgc ttagtttttt tgtgataatg ctaatattgt gtacttttgt
     5641 ttatcctttt gctttaaata cagttgcaaa atttattttt ccttatcaat caagtggaag
     5701 tttagtggat aaagaaggtc gtccgacttt ggatataagc aaagcggtag gttcaaagct
     5761 tttgggtcaa gattttaata agccttattt tctacattca agagcatctg tatcaaatta
     5821 caatacaagt gatacaaatg aaagcagtgt aagttcaggt ggatttaatt atgctatgtc
     5881 aaatcctgct ttaaaagagc gtgtgcaaaa agatttgcaa aaatttttag atgaaaatcc
     5941 gcaaattaca aaagaacaaa ttcctttgga tttgttaagc gcttcgggat caggacttga
     6001 tcctcatatc agtcttcaag cagccctagt gcaaattcct aggataagtc aatcttcaaa
     6061 aatcaccaaa gaagaattag aaaaaatcat tcaagaaaat acagagtcta aatttttagg
     6121 gatttttggg gaagaaaagg ttaatgtttt agccgttaat atagctattg ttaaagccat
     6181 gaaaaaagaa taaacatgca aagacaaagt cctgaacaaa ttcttaaaaa acttgaggtt
     6241 aaagccaagg aagaagaaaa aaacaaactt gcaaaattaa aaatattctt aggttatgct
     6301 gcaggttctg gaaaaactta tgctatgtta agtgaagcta gaactttaag ggataatgga
     6361 gttgatgttg ttttaggcta tatagagcct cacgatagac ctgaaacaat ggctttaaca
     6421 caaggttttg aaagtatagc taatcttgaa attccttata aaaatatagt attaaaagaa
     6481 tttgatttag acgctaccct taagagaaaa cctgctttgg ttttagtaga tgagcttgca
     6541 cacactaatg ctaaaggctt gcgtaatgaa aagcgttttc aagatataga agaacttcta
     6601 aaagcaggga ttgatgttta tactacttta aatatacagc atttagaaag tttaaatgat
     6661 ttagtcgcta atatcagtaa gatagaagtt aaagagcgta ttcctgatcg tatttttgat
     6721 gaggctgatc aggttgaact tgttgatatt gaacctaata agcttttaaa aagaatgcaa
     6781 gatggtaaaa tttataagga aaaacaagct aaactagcac ttgaaaattt ctttcgtcaa
     6841 gaaagactta tagctttgcg tgagattgcc ttaagaagac ttgcttcaag agtgaattta
     6901 agagcaagtg aacaaaggct tattaatgat gatttagctt atcatactgg agagcatatt
     6961 ttagtttgta ttaatgcttc aaatgcaaag gttattcgtg cagctgcaag acttgcttta
     7021 gcttttcatg ctaaattgag tgcgctttat ataaaaaatc ccaatattaa agaagaaaaa
     7081 gccttagaag aaaatataga actagctaaa agttttgatg ctgaaatcat tagcgtatat
     7141 gatgatgata tagcaagaca aattgcagag tattcaagcc ttagcaatgt ttctaaaatt
     7201 gttttaggta aaaataaaga taaaaaaaag tttaaagaag agatttttga agctgttgct
     7261 aaaaaagcac ccaatattga tttatatctt gttaatgaaa atcaaatttc tactcctaaa
     7321 atacgaagta aaaaaggttt tgatttttta ggttttttaa aaatcacagg agttttgctt
     7381 ttagcaactt ttatagcttt tgtatttcat aaatttaata ctcagccaag taatatagtt
     7441 atgattttta ttttagcagt ttttgcttct tcttttattt ctgataataa aattttcgcc
     7501 ttttattctt ctttggtaag tgttttgatt tataattttt tctttttaga acctattttt
     7561 agtcttaaag ttcatgataa tggaaatatt attactttta caactatgtt tatagttgga
     7621 tttttaacag ctgtttttac tagaagatta aaattgcaat ctaaagaact cactaaaaga
     7681 gcttatagaa cggctatttt gcttgaaaat agtgaaaagt tagcaagagt gaaaagcaaa
     7741 caagagcttt gggaacaact tggaaatcaa gctttaaaat tattaaattt acctattatt
     7801 atttatccta taaataaaaa caatatttta tcgaaacctt tgttgttttt taacgatgat
     7861 aagcaaatgt taaaaaattg ttttagtgct gatgagattg ctattgctca atgggttgca
     7921 acaaataaag aaagagcagg tgtttgtaca aataccctgc ctaatgctaa tgctatgtat
     7981 ttacctatag aagatgggga aaaaactaaa ggggttatag gtatagtttt aaaagaaaaa
     8041 cgtcccttgc aagactttca gtatgaaatt ttaagtgctt tacttaatga ggcaggagtt
     8101 agaacaaggg atatattttt attataaatc ccttaattta ttaatctcat ctctaatagc
     8161 agcagctttt tcaaactcaa gtgctttagc tgcttcaagc atttgttttc ttaactcttt
     8221 gacaagtttt gctctttcgc tagctggcat tttttctagt tttttacctt tgcgataaat
     8281 ttcgcctaaa tcctcttcat ttttcaaact ctcttcaata tggcgtttga ctgaagttgg
     8341 ggtaatattg tattttttat tataagccat ttgaagtttg cggcgttcat tggtggtatc
     8401 catagcttct tgcatggatt ttgtgatttt tttgcaaaaa agcaaaacct taccattgac
     8461 atttctagct gctcttccca tggtttggat taaacttgta gtgcttctta aaaagccttc
     8521 cttatctgca tccataatgg caatgagtga aacttcaggc aaatcaagtc cttctctaag
     8581 taagttaatg ccaattagca tatcaaaagc accgcttctt aaacctctta tgatttcatt
     8641 gcgttctata gcatcgatat ctgagtgcat gtatttgact tttataccaa gctctaaata
     8701 ataccttgta agttcttcag cgagtttttt agttagcacg gttactaaaa cccgttcgtt
     8761 tctttgtatg acttttttag cctcatcaaa taaaatttca acctgattat cactatcttt
     8821 taattctatt aaaggatcaa gcagtcctgt aggacgcatg atttgatgaa agatgttttc
     8881 tttgctaagt tcaagttcta aaggtgcagg tgtagctgaa acaaaaagaa attgacaatt
     8941 tttatggata aattcatcaa acattaaagg acggttatcc aaggctgaag gcaaacgaaa
     9001 accataatcc accaaggttt gttttctgct tctatctcct gcaaacatac ctctaaattg
     9061 tggtaaagat acatggcttt catcgactat aacaagaaat tttctatctt taatcgcaaa
     9121 ataatcaaaa agcgtataag gagtatcacc ttctttaagc cctgttaaat gccttgcata
     9181 attttcaact cctttacaca ttcctgtgct tgtaagcatt tcaagatcaa attcaactct
     9241 ttgtttaagg cgttgatatt ctacgagttt attttcatgt tcaaaataag caaggcgttc
     9301 gttaagttct gcttttatgt cttttatcgc ttgttttaat cttgtttcgc ccacgctaaa
     9361 ctggcttgta ggatagagta tgaagcgttt taaatctttg ccttttttat tttctaaaac
     9421 attgtaatga tacatagcat caagctcatc gccaaaaaat tcaagtctta ctacttcatc
     9481 ttcataataa gctggataaa tgtctataat atctccttga actctaaaat ctgcacgatc
     9541 aaaaaaatta tcatttcttt tataacccat atctacaagt ttttttaaaa gttctttttg
     9601 tgaaatttgc atacctagtt caaagattaa aaccatgcct atgtattcat ttggattacc
     9661 aagtccataa tttgccgaaa cactagctat gcaaactaca tcttcataac ttaaaagaga
     9721 agcagtagca ctcagtctta aacgctctaa gtcttcattg gtcgagctat ctttttctat
     9781 gaaaacatca gtgcgtggga tataggcttc aggttgataa taatcataat aagatataaa
     9841 atattctaca tgatttttag aaaaaaagcc tttaaattcg ctataaagtt gtgcacaaag
     9901 gcttttgttg tgactcatga taagagtggg tatattaagt tctttaatga catttgccat
     9961 ggtaaaggtt tttccacttc ctgtaacgcc tagtaaggtt tgatatttgt tgcctttttt
    10021 tatgcttttt actatgcctt ttatggcttc ttgttgatcg ggactgggtt taaattcgct
    10081 ggtaagttct aacatttttc tactttattt ttatttttga aaaaatttta aaagaaaatg
    10141 ctttaattaa aaattaattg acaataaaaa cctaaattta aatttttttc tgctacaata
    10201 tcaaataata ttttccataa attacaaatt tcttaagaag gcaaaaatat gtttgatgaa
    10261 aaaataatca atactatgac agataaagta aatgaattaa ttgaaaagta taacgaagtt
    10321 tgcgaagcca atgaggcttt aagaaatgag cttgtaagcg ttaaagcaca aaatgaagca
    10381 aaaagtaatc aaatcatgcg tttagaagaa gaacttaaat ctcgcaatat agaaagcgaa
    10441 gatatttata agaaaataga ggctgttctt ggcagataat ctaaaacaag tcattgttaa
    10501 tgttaatgca aaagatttca ttgttaagtg cagtgaagaa tttgcaaatt ttttagaaga
    10561 tgatatcgct ttgatttctg gcggtactaa aaaaatagaa cttaaacgct ttgtagatgc
    10621 gtttgttaaa aaaagttatg aaaattatat tttagaaaga gaacttaaga aactaataaa
    10681 agcaatcaat gaagaactcc cggcaaaatg aataaagctt ttactctgct tgagcttgtt
    10741 tttgtgattt tgattttggg aattttatca agcttatctt tatcttttat caatactaca
    10801 aaagatgagg ttaaaatttt aaaattaaaa atggactatg aaatgctaag ctcagctctt
    10861 gctttaatgc gtagtcaaat gagacttaaa aatttaaatt ttccagaaat tttagataat
    10921 gcgcaaaaca atcaagccaa agaaaaactc ttttattgtt taaatgattg tgattattct
    10981 ttgcttgata cacctattta ttctgatttt aaatcttgga taaaaatagg taaaaatcgc
    11041 tatagatttg cattaaacgc caaagagatg gttgaattta tttatgattc taaagaaggc
    11101 ttgttaaagt gtataggaag ttctagatgc aaagatctga tataagatat tatgaacttg
    11161 caatttgtgg tttgtatttg gataatttaa cttttcatag ttttgatgaa atcaaacctt
    11221 taacacaagt attagtggat ttaaaaacta aaaaaaacct taaagctatc gtgcttaaag
    11281 aatgtcaaaa acccgatttt aaaaccgtag aaattaaaga aattacagaa tattttctaa
    11341 ctcctttgca gtttgaattg gcaaatttta ttgtttatta ttatgcttca aaacttggtt
    11401 ttgttttggg attttttgaa actagtccta agtatgaatg tcaaaaaatg ttttttaaag
    11461 atacccctaa gctaagcaat caacaacaaa atgccttaag ttttcttcaa aaagaaaata
    11521 attccttact ttttgctgat acaggtagtg gcaagactga aatttatatt tctttgataa
    11581 aagagtgttt agaacagggt aagcaagctt tacttttaat gccagaaatc gcacttactc
    11641 cacaaatgaa aaagcgttta gaagtgtatt ttaaggataa ttttttcctg tggcattcta
    11701 aaatttcaaa gaaaaaaaag caagaatatt tagagcgttt ttgcaaggga gaagtacttt
    11761 tagtagcggg tgcaagatcg gctttgtttt tgccttttag aaatttagga cttattgtag
    11821 tagatgaaga acatgataat tcttataagg cttctaatca gccttttatc aatgcaagaa
    11881 atttagcgct ttttttgggt caaaaaaata atattaaagt ggttttaggt tctgcaaccc
    11941 catctttgac gagtttttac aaacaaaaaa gttttagact aaaaggaact ttttttgaga
    12001 gcaaaaaaca ttttttatat gatgaaaatg agcttggtat aacgcctatg cttttaagcg
    12061 aattagaaaa aagtttaaaa catcaaaaac aagctatagt gtttttacct acaagggcta
    12121 attttaggca aatcatttgt aaggattgcg gggaaacgat aaaatgtcct ttttgttcta
    12181 tcgccatgag tatgcataaa aagaaaaatg ttttaaaatg tcattattgt aattatactt
    12241 ctttaataga gcaaaattgt ccaagttgta aaggagaaat gttagaagct agaaaaatgg
    12301 ggactgctga acttttagag cttttgcaaa atgctttgcc tttagcaaaa atagcaaaat
    12361 ttgatagtga tgaaatcaca agcgttaaaa agcttaatac tattttaaaa gactttaatg
    12421 aaaataagat cgatatactt attggcacct ctatgcttgc taaagggcat gattatcata
    12481 gcgtggattt gagtgtgatt ttagggcttg atgagtattt gttgcgtcct agttttagag
    12541 cgagtgaaga aactttagct ttagctatgc aagttgctgg tagggcaggg cgtaaaggtg
    12601 aagcaagagt acttttgcaa acaaaaaata gagctttttt tgaaaggtat atagagaatt
    12661 atgatgcttt tttaaaagat gagttagaaa atagaaaaga tctttacccc ccatttaaac
    12721 gccttttaag agttcttata gaagataaag atcaaaaaag tgcacaaaaa ctttgtgaaa
    12781 aatttgcttc tcaatttaga aatatcaaac aggtagaatt ggtaggctat ggaatttgtg
    12841 gagttgaaat gctgtatgga aaatatcgtt tttatttgtt gcttagaagt gaaaatcata
    12901 aagctttagt ggcaattgaa aattatattt tgcaatttaa aaatgcaagt gcggatattg
    12961 atcctattga ttttgtgtaa gtgatatgat tatttatctt tgtatatttt ttcaaattct
    13021 ttataatatt tccaagaatc aataatatga ggatgtgttt gttttaaatg atttagttca
    13081 ttttcaaaaa tattaaaaaa agtgtaaata agtgatttat tttttataaa ataatctatt
    13141 acatcttttt ctttcatcat ttttgattct gtttcatcta tggttatttt aatttgatat
    13201 aaaaaatcat acaaataatg tttaattgtt gaaaataaaa gattgttttg ttctaattgc
    13261 ttaaaatcat ttttatcaat atatacactc atatcattac ataggtcgtt ttttataatt
    13321 tcttgtatta tgtctatttt ttcatgattg atatgttttc tgtctaaaat tatgggaatg
    13381 ctagaagttc tatcaatatt gaaattttta ttatttttag gagtattaag ataaaaggtg
    13441 ttattaatat ctttagaatt tgcataaagt gtaataggaa aaagatagcg aatataacct
    13501 ctaaattctt taattttaaa taaatctaat ttatctttat gggggggggt aaaattaaaa
    13561 tttatagcaa gtaaattcat ggtatcgaag gcctttgatt ggcggatttc ttccatatca
    13621 agatagcata cattgtcttt gttaaaatat tttaataaat aagagatgat aaaaactcct
    13681 tgttgtagtt catttatatc gattttaatt ttatgatttt gatgagtaag atagttgatg
    13741 taataacgcc aatcataagt tagattaaat tcagggggat agtttcttaa aactttactc
    13801 caatctcttc cccagctatg ctttaaaagt cctattggat ctcgaactcc gcaaataatc
    13861 ttagaattaa aatctaataa agatagatat ttatcaaaat aaggtagatt aatttctgat
    13921 atattaatag catattgagc aattgtatta tcatttagac acatgtaatt aatacaatat
    13981 ctctctttgc tatcaggtgg taaaacccag gaggcaaaac aagttacatc gcaacattga
    14041 ttaaggtatc ttaaaaatgc tgctgctcca acgccatgtg gagaaatata gataaattta
    14101 tagtgtttag gtaggggtaa atttaaatcc caagctaatt ctgcgcaatg tcgactagaa
    14161 tctatttcta taaaattatg attgattaaa ggtggataag gatgttttgt tgataaatat
    14221 ctatccctaa attcgttaga attgagccaa gtgcaaattg tttcaatatt tttcaaaaca
    14281 aaggtaaaaa atttttcatt attcgaattt tttaaagctt gtaaaagaat ttgagctagg
    14341 gttggagtta ggttattttt tatatagagt aaaagatttt
//
LOCUS       DAPIWB010000044        13714 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.045, whole genome shotgun sequence.
ACCESSION   DAPIWB010000044 DAPIWB010000000
VERSION     DAPIWB010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13714)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13714)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13714
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.045"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(39..422)
                     /gene="queF"
                     /locus_tag="RJ266_001148"
     CDS             complement(39..422)
                     /gene="queF"
                     /locus_tag="RJ266_001148"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HDV7354893.1"
                     /translation="MRYGEKEIKEFDVENMEIWPNDAKNDYIIKITLPEFMCCCPRSG
                     YPDFATIYLEYMPDKFVVELKAIKLYINTFMYRNVSHEASINEIYNTLKDKLKPKWIK
                     VVGDFNPRGNVHTVIECRSDMVVPK"
     gene            582..1181
                     /locus_tag="RJ266_001149"
     CDS             582..1181
                     /locus_tag="RJ266_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDV7354894.1"
                     /translation="MRKSIAIIGGSIAGLSAALFFASAKNKELDFDITVFDEGKADLK
                     AAAIYNVPFFPKGAKADEIYTHIKAQIASMLEVKYIDSKVVSISGEKGDFTVNDEQGL
                     GIKADYIIVATGANKSDIKELEDFVIPHELMPKPNKFCFKHHGRQIIKEGIYAAGLAS
                     GVTTMVACAMGSANEAACAILSDIKGAVSVYHDTPTTRV"
     gene            complement(1186..2067)
                     /gene="metA"
                     /locus_tag="RJ266_001150"
     CDS             complement(1186..2067)
                     /gene="metA"
                     /locus_tag="RJ266_001150"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HDV7354895.1"
                     /translation="MPLIIPENIPAYELLKEHAFIMGLRRAKHQDIRPQEILIVNLMP
                     KKIETENQILSLLANSPLQVNITLLATTSYVGKNTPFTHLEKFYKGLEEVKKHKFDGA
                     IVTGAPVEQMDFEKVAYWEELLEIFDFLKQNVTSSMYICWGAMAALKYFYGVDKISLD
                     KKIFGVYKHDKVSPDLALTNLDEKVLMPHSRHSSMDEEQILALQKQGKLKILLRNKKI
                     GSALLRDEKNIFILGHLEYFKETLHQEYVRDNFIQKAKNYYDKKGNIKYNWRSNANTI
                     FANWLNYDVYQSTPFVL"
     gene            complement(2151..3422)
                     /locus_tag="RJ266_001151"
     CDS             complement(2151..3422)
                     /locus_tag="RJ266_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase/cysteine synthase"
                     /protein_id="HDV7354896.1"
                     /translation="MNFNKETLALHGAYNFDTQRSISVPIYQNTAYNFENLDQAAARF
                     NLQELGNIYSRLSNPTSDVLGQRLANVEGGAFGIPVASGMAACFYALINLASSGDNVA
                     YSNKIYGGTQTLISHTLKNFGIEAREFDIDDLDSLEKVIDQNTKAIFFESLSNPQIAI
                     ADIEKISQIAKKHKIVSICDNTVATPFLLQPFKHGVDVIVHSLSKYVSGQGSALGGAL
                     IERKDLNDLLKNNDRYKAFNTPDPSYHGLNLNTLDLPIFSIRVIITWLRDLGASLAPQ
                     NAWLLLQGLETLAVRIEKHSQNAEKVANFLNSHPDIKGVNYPTLASNAYHNLFKKYFD
                     KNFASGLLSFEAKDYEHARRICDKTQLFLLAANLGDSKSLIIHPASTTHSQLSEEELQ
                     KAGITKATIRLSIGLENSDDLIADLKQAIES"
     gene            complement(3847..6420)
                     /gene="flgE"
                     /locus_tag="RJ266_001152"
     CDS             complement(3847..6420)
                     /gene="flgE"
                     /locus_tag="RJ266_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HDV7354897.1"
                     /translation="MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTM
                     FSQTVKIATAPTDGRGGSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFF
                     MVSDDGGLTRYLTRSGDFKLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFID
                     PGMHIPAAQSTEVAIKANLNSGLNIGTAKTPIYGLDSVHGYNKKDGTAKNENDTGITQ
                     FYTTSKNSIEVTEKGVDAGSLFNANGTGLNLRDGQGIWVSYADAKFSTAGEGAQPNQG
                     NNGVFDPNQKVLQDRVIFWGHEQKPTTLDITLNGVHIQNTSIKSLDEAIAYINTFTAP
                     TDTRDGTGVRAVKKADGSGIDFINDNADGTTDNMKNIDLQVNPQNSAGELVRVRVNNA
                     NPPDFDWQNTTLRPAGNPIVNGNGSAWIAGTAAQNQNRIQIVTAHKYVYSSTPVQLDP
                     MYNPDGGPAFNPANQGTAGTAENNYMNAIQGSLLNTTVRSFRTTEDLRELLQRDARYG
                     VDYDGSGGFEADGRDVNEGVKVTVGATGEFVISNPNEIPARPGVTPPGGGVDNRKPHD
                     ISFNVTAYTDAQGKVSTNTAFTNIFKGFDGVLTVGNSNRQSEQLFLSAFSAGLEIFDS
                     LGSKHTIEVQFVKQSTTQDGGNEWQMIIRVPEPAEINTTGEGPNNIIVGTARFNNDGS
                     LSNYTPKTINFSPNNGAAPNQQIKLSFGTSGSNDGLVSSNSASTLTGQATDGYTSGNL
                     KPDAIRVDDKGNILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGNIVV
                     GEAGTGGRGEMKTSALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLK
                     Q"
     gene            complement(6625..7107)
                     /gene="ruvC"
                     /locus_tag="RJ266_001153"
     CDS             complement(6625..7107)
                     /gene="ruvC"
                     /locus_tag="RJ266_001153"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HDV7354898.1"
                     /translation="MNLKILGIDPGSRNCGYAIIEANKGKNILIEAGLIKIKPSTLQY
                     QITELCEGLDLIFKNHSFDEVAIEDIFFAYNPKTVLKLAQFRGALSLKILQIHGDFAE
                     YTPLQVKKAVTGKAKATKEQVAFMVKRLLGLSKDIKPLDITDAIAVALTHAANLRVRV
                     "
     gene            7203..8525
                     /gene="dnaA"
                     /locus_tag="RJ266_001154"
     CDS             7203..8525
                     /gene="dnaA"
                     /locus_tag="RJ266_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HDV7354899.1"
                     /translation="MNPSQILENLKKELNENEYENYLSNLKFNEKQSKADLLVFNAPN
                     ELMAKFIQTKYGKKIAHFYEVQSGNKAIINIQAQSAKQSNKSTKIDIAHIKAQSTILN
                     PSFTFESFVVGDSNKYAYGACKAIIHKDKLGKLYNPIFVYGPTGLGKTHLLQAVGNAS
                     LEMGKKVIYATSENFINDFTSNLKNGSLDKFHEKYRNCDVLLIDDVQFLGKTDKIQEE
                     FFFIFNEIKNNDGQIIMTSDNPPNMLKGITERLKSRFAHGIIADITPPQLDTKIAIIR
                     KKCEFNDINLSNDIINYIATSLGDNIREIEGIIISLNAYATILGQEITLELAKSVMKD
                     HIKEKKENITIDDILSLVCKEFNIKPSDVKSNKKTQNIVTARRIVIYLARALTALTMP
                     QLANYFEMKDHTAISHNVKKITEMIKNDASLKAKIEELKNKILVKSQS"
     gene            8685..9752
                     /locus_tag="RJ266_001155"
     CDS             8685..9752
                     /locus_tag="RJ266_001155"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HDV7354900.1"
                     /translation="MKLSINKNTLESAVILCNAYVEKKDSSTITSHLFFHADEDKLLI
                     RASDYEIGINYKIKKIRVESSGFATANAKSIADVIKSLNNEEVVLETIDNFLFIRQKS
                     TKYKLPMFNHEDFPNFPNTEGKNQFDIDSSDLSRSLKKILPSIDTNNPKYSLNGAFLD
                     IKTDKINFVGTDTKRLAIYTLEKANNQEFSFSIPKKAIMEMQKLFYEKIEIFYDQNML
                     IAKNENFEFFTKLINDKFPDYEKVIPKTFKQELSFSTEDFIDSLKKISVVTEKMKLHF
                     NKDKIIFEGISLDNMEAKTELEIQTGVSEEFNLTIKIKYLLDFLTSIEEEKFTLSVNE
                     PNSAFIVKSQGLSMIIMPMIL"
     gene            9781..12090
                     /gene="gyrB"
                     /locus_tag="RJ266_001156"
     CDS             9781..12090
                     /gene="gyrB"
                     /locus_tag="RJ266_001156"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HDV7354901.1"
                     /translation="MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVD
                     NSIDEAMAGHCDTIDVEITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGK
                     FDKDTYKVSGGLHGVGVSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGVIGKSK
                     KTGTTIEFWPDDQIFEVTEFDYEILAKRFRELAYLNPKITINFKDNRVGKHESFHFEG
                     GISQFVIDLNKKEALTKAIFFSVDEEDVNVEVALLYNDTYSENLLSFVNNIKTPDGGT
                     HEAGFRMGLTRVISNYIEANASAREKDNKITGEDVREGLIAVVSVKVPEPQFEGQTKG
                     KLGSTYVRPIVSKASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKE
                     SLSVGTLPGKLADCQSKDPSESEIYLVEGDSAGGSAKQGRERSFQAILPLRGKILNVE
                     KARLDKILKSEQIQNMITAFGCGIGEDFDLSKLRYHKIIIMTDADVDGSHIQTLLLTF
                     FFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKDEKALSEYLIETGIEGLNYEGIGM
                     NDLKDYLKIVAAYRAILKDLEKRFNVISVIRYMIENSNLVKGNNEELFSVIKQFLETQ
                     GHNILNHYINENEIRAFVQTQNGLEELVINEELFTHPLYEEANYIFDKIKDRGLEFDK
                     DILEVLEDVETNAKKGATIQRYKGLGEMNPEQLWETTMDPSVRRLLKITIEDAQSAND
                     TFNLFMGDEVEPRRDYIQAHAKDVKHLDV"
     gene            complement(12116..12457)
                     /locus_tag="RJ266_001157"
     CDS             complement(12116..12457)
                     /locus_tag="RJ266_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monoheme cytochrome C"
                     /protein_id="HDV7354902.1"
                     /translation="MKKIILILALFLSASWAQNLEINPDTGLIIDPDSPLVEANCLAC
                     HGSNLITNMHASKKAWLAAIRWMQDSEGLWEIEPEDEEKILNYLEKYYGEKYDTRRRI
                     PLAIFLQNKTH"
     gene            complement(12460..13698)
                     /locus_tag="RJ266_001158"
     CDS             complement(12460..13698)
                     /locus_tag="RJ266_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase"
                     /protein_id="HDV7354903.1"
                     /translation="MKQNDQKENRRDFLKNIGLGLFGISVLSNFSFENFLGSKALAKE
                     LPDFKIEGKKDLIYHGEKPLTAETEIYALDSDFTKPENFFVRNNGLPPSLETIKERLH
                     KGWTLEIDGESIINKKSYTIEDLKKKFKTYTYALTVECGGNGRSEVIPSTKGTQWGYG
                     AVACGRWTGVRLKDILKDCGIKNDAVYIGYYGIDTKLNGEETSPISRGVPISKALQDE
                     TLIAWAYEGKDIPLVNGYPLRLVCGGYPASTSGKWLYKISVRNKIHDGEKMEGSYKVP
                     VNPVKPGDFNYKGEMKIIESMPIRSVITNIKNGSEIKANKKFEVRGKAWAGELEVSEV
                     YVSNDYGVTWTKAKVEKPLNRLAWQKWSAQISIPTKGYYEIWARAIDSQGNSQPMVLA
                     QWNPGGYINNACHRVNVYGV"
BASE COUNT         4735 a         2289 c         2134 g         4556 t
ORIGIN      
        1 atctttacat aaaaatatgt taatatttta cttaaatatt attttggcac taccatatcg
       61 ctacgacatt ctatcaccgt atgcacattt ccacgcgggt taaaatcccc cacaacttta
      121 atccattttg gcttgagttt gtcttttaga gtattataaa tttcattgat acttgcttca
      181 tgtgaaacat ttctatacat aaaagtattg atataaagtt ttatcgcttt aagctcaacc
      241 acaaatttat caggcatata ctcaagataa atcgttgcaa aatcaggata acctgaacgc
      301 ggacaacaac acataaattc aggcaaggtg attttaatga tatagtcatt tttagcatca
      361 tttggccaaa tttccatatt ttctacatca aattctttaa tttctttttc accataacgc
      421 atgagctttc cttattgaaa atttttagaa aattatataa aaaattactt ttagagcaat
      481 tgaaaaataa acatttttag caaattgcat aaaaaagaca aatattatat taaataaagc
      541 tttttatact agaataaggc aaatctttca aaaggaaaaa aatgagaaaa tcaattgcaa
      601 ttataggcgg tagcatcgca ggacttagcg cggctttatt tttcgcttca gctaaaaata
      661 aagaacttga ctttgatatc actgtttttg atgagggtaa agcagattta aaagcagcag
      721 caatttacaa tgttcctttt ttcccaaaag gtgcaaaagc agatgaaatt tacactcaca
      781 taaaagcaca aattgcttct atgctcgaag taaaatacat cgattcaaaa gtagtaagca
      841 taagcggaga aaaaggagat tttactgtta atgatgagca aggcttgggc ataaaagcag
      901 attatatcat cgtagcaaca ggggcaaaca aaagcgatat caaagaactt gaagattttg
      961 taataccgca tgagcttatg ccaaaaccaa acaaattttg cttcaaacat cacgggagac
     1021 agattatcaa agaaggaatt tacgcagcag gacttgcttc aggtgttacg actatggtag
     1081 cttgcgcgat gggaagtgcc aatgaagcag cttgcgcgat tttaagcgat atcaaaggtg
     1141 cagtaagcgt atatcacgat acacctacta caagagttta aatcatcaaa gcacaaaagg
     1201 tgtgctttga tacacatcat aattgagcca atttgcaaaa atggtatttg catttgaacg
     1261 ccaattgtat tttatattgc cctttttatc ataataattt ttagcttttt gtatgaaatt
     1321 atctcttaca tattcttgat gtaaagtctc tttaaaatat tccaaatgcc ctaaaataaa
     1381 aatattcttt tcatctctta ataaagccga accgattttt ttatttctaa gcaaaatttt
     1441 taatttccct tgtttttgta gtgctaaaat ttgctcttca tccatgctag aatgtcttga
     1501 atgaggcatt aaaacctttt catctaaatt tgttaaagca agatcaggcg aaactttatc
     1561 atgcttatag actccaaaaa ttttcttatc taaagagatt ttatccacac cataaaagta
     1621 ttttaaagca gccatggcac cccaacaaat atacatagaa cttgttacat tttgctttaa
     1681 aaaatcaaaa atttctagca attcttccca gtaagcaacc ttttcaaaat ccatttgttc
     1741 cacaggagct cctgtaacaa tagcaccatc aaatttatgt tttttaacct cttcaagacc
     1801 cttgtaaaat ttttccaaat gagtaaaagg agtattttta cccacatagc tagtcgtggc
     1861 taaaagtgtg atatttactt gcaaaggaga atttgcaagt aagcttagaa tttgattttc
     1921 tgtttcaatt ttttttggca taagattgac aatcaaaatt tcttgcggcc tgatatcttg
     1981 atgctttgct ctccttaatc ccatgataaa agcatgctct tttaaaagct cataagcggg
     2041 tatattttct ggaataatca gtggcatttt ttctccttta tttaataaac cttatttatg
     2101 ataaagcatg gtggaatttt tatctcattc cactcaatgc aaacacactt ttaactttct
     2161 atagcttgtt ttaaatccgc tatcaaatca tcgctatttt caagtcctat gcttaagcgt
     2221 atagtagctt tcgtaatgcc tgctttttgg agttcttctt cgcttagttg cgaatgagta
     2281 gtagaagcag gatggatgat caaagacttg ctatcaccca aatttgcagc aagtaagaaa
     2341 agttgagttt tatcacaaat tcttctagca tgctcataat ctttagcttc aaagcttaaa
     2401 agcccgctag caaaattttt atcaaaatat tttttaaata aattatgata agcattactt
     2461 gctaaagtag gataatttac gcccttgata tcaggatgag aatttaaaaa attcgcaact
     2521 ttttcagcat tttgactgtg tttttctata cgcactgcca aggtttcaag tccttgtaaa
     2581 agtaaccaag cattttgagg tgctaagcta gctcctagat ctctaagcca agtgatgatg
     2641 actctaatac taaaaatcgg caaatcaagt gtatttaaat tcagtccatg ataacttgga
     2701 tcaggagtgt taaaagcttt atatctatcg ttatttttaa gcaagtcgtt taaatctttt
     2761 ctttctataa gtgctccacc caaagcactg ccttgaccgc ttacatattt acttaaacta
     2821 tgcacgatta catccacgcc atgtttaaaa ggttggagta agaaaggagt agcaacggta
     2881 ttatcacaaa tgctaacgat tttatgtttt tttgctattt ggcttatttt ttctatatca
     2941 gctatggcaa tttgaggatt tgaaagactt tcgaaaaaaa tcgcttttgt gttttgatct
     3001 ataacttttt ccaagctatc taaatcatcg atatcaaatt ccctagcttc tatgccaaaa
     3061 tttttaagtg tgtgagaaat taaagtttga gtcccaccat aaattttgtt cgaatacgcg
     3121 acattatctc ccgaacttgc taaattgata agagcataaa aacaagctgc cataccgcta
     3181 gcaacaggaa ttccaaaagc ccctccttcg acattagcaa gtctttgtcc taaaacatcg
     3241 cttgtaggat tgctaagtct tgagtaaata ttgccaagtt cttgaagatt aaaccttgct
     3301 gcagcttgat ccaaattttc aaaattatac gcagtgtttt gatatatagg cacactaata
     3361 cttctttgag tatcaaaatt ataagctccg tgtaatgcta aagtttcttt attgaaattc
     3421 attttttatc cttattgtgt caatgaaaaa atgttaaaaa gctttttatc ggctttaaac
     3481 taggctattt gaaaatgtaa atttatagaa tatgagtata tacgagcaga ttaagcgtgc
     3541 caagcacgca tacagaaaga agaaagcatt aagttaaaac taatataaga cattttttct
     3601 cctttctaaa aaattattga ttattctatc tttaaaaaat aaaattaaaa ttaaatttta
     3661 aaaaatttat atcacattgc ttaaaatttt attgcaactc acccctagca agagtgagtt
     3721 agcaataaat tgaaggcagt tcaagcctaa gcctagtatt acaagactac caagataggc
     3781 ttgtaaagca aggcttgctc ccttaaggga gcaaaaaaca atattttata gaatactaag
     3841 cttaaattat tgtttaagct ggattagagt ttgaagcatt tgatcactcg ttgaaatggt
     3901 ttttgaattt gcttgataac ctctttgaat gataataagc tctgttaaag aacgacttaa
     3961 atccacattt gacatttcaa gagctgaggt tttcatctca ccacgacctc ctgttcctgc
     4021 ttcgcctact acgatattac cactatttgc agtgacttta aaaagatttc caccaatttc
     4081 ctcaagacct gagttatttg ccactgaagc cattgctatt tttgctacag caaaggtttt
     4141 gccattagta aattcaccta agatattacc tttgtcatcc acacgaatag catcaggttt
     4201 taagttacct gaagtataac catcagttgc ctgtcctgtt agagttgaag cagaatttga
     4261 acttacaagg ccgtcattgc ttccacttgt tccaaaggaa agtttgattt gttgatttgg
     4321 tgcggcacca ttgtttggtg agaaatttat agtttttggt gtatagtttg ataaagaacc
     4381 atcgttgtta aatcttgctg ttcctacgat gatattgttt ggtccttcgc ctgtagtgtt
     4441 aatctctgca ggttctggta cacggatgat catttgccat tcattaccac catcttgagt
     4501 tgtactttgt tttacaaatt gcacttctat agtgtgtttt gatcctaaag agtcaaatat
     4561 ttcaagtcca gcagaaaacg cacttaagaa aagttgttcg ctttggcgat ttgaatttcc
     4621 tactgttaaa actccatcaa aacctttaaa tatatttgta aatgccgtat ttgtacttac
     4681 tttgccttga gcatctgtat aagctgtaac gttaaagctt atatcatgag gttttctatt
     4741 atctacacca ccgcctggag gtgttacacc aggtctagct ggaatttcat ttggatttga
     4801 tattacaaat tcacctgttg caccaactgt tacttttaca ccttcattaa catctctacc
     4861 atcagcttca aatccaccac ttccatcata atcaacacca tatctagcat ctctttgtaa
     4921 aagttctctt aaatcttcag tggttctaaa gcttcttact gttgtattta ataaagaacc
     4981 ttgtatagcg ttcatataat tattttcagc tgttccagca gtaccttgat ttgcagggtt
     5041 aaaagcaggt ccgccatctg gattatacat aggatctagt tgaactggag ttgaactata
     5101 tacatattta tgagctgtta ctatttgtat tctattttga ttttgagcag cagttccagc
     5161 tatccaagca ctaccattac catttactat aggattacct gcaggtctaa gagtagtatt
     5221 ttgccaatca aaatcaggtg gattagcgtt gttaaccctt acccttacta attctccagc
     5281 tgaattttga ggatttactt gtaaatctat atttttcatg ttatctgtag tgccatcagc
     5341 attatcattg ataaaatcaa tcccactacc atctgctttt tttactgctc ttactcctgt
     5401 tccatccctt gtatccgttg gtgcagtaaa ggtattaata taagctatag cttcatccaa
     5461 gctttttata gaagtattct gtatatgaac tccatttaaa gtaatatcca aagttgtagg
     5521 tttttgctca tgtccccaaa atataactct atcttgcaga actttttgat taggatcaaa
     5581 aacaccatta ttaccttgat ttggttgagc tccttctcca gctgtactaa acttagcatc
     5641 tgcataagat acccaaatcc cttgtccatc tctaagattt aatcctgtgc cattagcatt
     5701 aaaaagtgat cccgcatcca cacccttttc cgtcacttct atagaatttt tggaagtcgt
     5761 gtaaaactga gtgattcctg tatcattttc attttttgct gttccatctt ttttgttata
     5821 tccatgaaca gaatcaagtc catatatagg agttttagct gttcctatat ttaaaccact
     5881 atttaaattc gctttgatgg ctacttctgt ggattgcgct gcagggatat gcatacctgg
     5941 atcgataaaa atattttgcg gagttcttga actatctata ctttgagtat cccagttgat
     6001 attccaccct tggacaacaa aacctgcatt attaacaaaa tttccataag catcgagttt
     6061 aaaatccccg ctccttgtaa gatagcgagt aagcccccca tcatcactca ccataaaaaa
     6121 accatcgcca tttatagcca catcagtgtt tttatctgtg gtttgaactg aaccttgaga
     6181 atgaattcta gttgtagaac ttactgaaac gccaagaccg atttgaagtg gattagatcc
     6241 acctcttcca tcagttggag ctgtagcgat tttcacagtt tggctaaaca tagtcccaaa
     6301 atctgcacgg gagtatttaa aaccagtggt attaacattt gaaatgttat taccttcaac
     6361 atccatcgca acttgatgtg cttgtagtcc gcttacgcca gaccaaagtg atctcatcat
     6421 cttaaatcct ttataaaata ttgctttaaa aaatttaacg ctttggcttt aaaaaacttt
     6481 tgcgtttatg tgaagtttac aagcaagttc tgttccaact tttgaaattt tttatgaaat
     6541 tttttaaaaa tttatagaaa aaatttaaag gtattttggg agtttatgaa gctttgggct
     6601 tttgtgtaat gaaaattacc aaaattacac cctaactctt aaatttgctg catgggttaa
     6661 agctactgca atagcatctg tgatatccaa aggcttgata tctttactaa gtcctaaaag
     6721 cctttttacc ataaaagcaa cttgttcttt agttgctttg gcttttcctg taacggcttt
     6781 ttttacttgt aagggagtgt attctgcaaa gtctccatga atttgaagaa tttttaaaga
     6841 tagggctccg cgaaattgtg cgagttttaa aacggttttt ggattgtaag caaaaaagat
     6901 atcttctata gccacctcat caaaagaatg atttttaaaa atcaagtcca aaccctcaca
     6961 aagctctgtg atttgatact gtaaggtgct tggctttatc tttataagtc ctgcttctat
     7021 gagaatgttt tttcctttgt tggcttctat gatagcataa ccacaatttc tcgaacctgg
     7081 atctatacct aaaattttca aattcatacc ttttgaaaaa taaaatacga aagcggattt
     7141 taaccttttt ttataaaatt taagataaaa tttatacatt atgcaaaatt taaagagaga
     7201 ttatgaatcc aagccaaata cttgaaaatt taaaaaaaga attaaacgaa aacgaatacg
     7261 aaaactattt atcaaattta aaattcaacg aaaaacaaag caaagcagat cttttagttt
     7321 ttaacgctcc aaatgaactc atggctaaat tcatacaaac aaaatacggc aaaaaaatcg
     7381 cgcattttta tgaagtgcaa agtggaaata aagccatcat aaacatacaa gcacaaagtg
     7441 ctaaacaaag caacaaaagc acaaaaatcg acatagctca tataaaggca caaagcacga
     7501 ttttaaatcc ttcttttact tttgaaagtt ttgttgtggg ggattctaac aaatacgctt
     7561 atggagcatg taaagctata atacataaag acaagcttgg aaaactttat aatcctatct
     7621 ttgtttatgg gcctacagga cttggaaaaa cacatttact tcaagcagtt ggaaatgcaa
     7681 gcttagaaat gggaaaaaaa gttatttacg ctaccagtga aaattttatc aatgatttta
     7741 cttcaaattt aaaaaatggc tctttagata aatttcatga aaaatataga aactgcgatg
     7801 ttttacttat agatgatgtg cagtttttag gaaaaaccga taaaattcaa gaagaatttt
     7861 tctttatatt taatgaaatc aaaaataacg atggacaaat catcatgact tcagacaatc
     7921 cacccaacat gctaaaaggt ataaccgaac gcttaaaaag tcgttttgca catgggatca
     7981 tagctgatat aactccacct caactagata caaaaatagc catcataaga aaaaaatgtg
     8041 aatttaacga tatcaatctt tctaatgata tcataaacta tatcgctact tctttagggg
     8101 ataatataag agaaatcgaa ggtatcatca taagtttaaa tgcttatgca accatactag
     8161 gacaagaaat cacactcgaa cttgccaaaa gtgtgatgaa agatcatatc aaagaaaaga
     8221 aagaaaatat cactatagat gatattttat ctttggtatg taaagaattt aacatcaaac
     8281 caagcgatgt gaaatccaat aaaaaaactc aaaatatagt cacagcaaga cgcattgtga
     8341 tttacctagc tagggcactt acggctttga ctatgccaca acttgcgaat tattttgaaa
     8401 tgaaagatca tacagctatt tcacataatg ttaaaaaaat cacagaaatg ataaaaaatg
     8461 atgcttcttt aaaagcaaaa atcgaagaac ttaaaaacaa aattcttgtt aaaagtcaaa
     8521 gttaagtgaa aggatgtgaa aaataaattc tagagtgtga aaaaaagaaa ttaagcaaag
     8581 tatgataaaa tacaaatttg attattttgc tttgaagaat ttcacaattt caacaagctt
     8641 attattacaa cgaatttaaa attaaaataa accaaggaga aaaaatgaag ttaagtatca
     8701 ataaaaatac tttagaatct gcagtgattt tatgtaatgc ttatgtagaa aaaaaagact
     8761 caagcaccat tacttctcat cttttttttc atgctgatga agataaactt cttattagag
     8821 ctagtgatta tgaaataggt atcaactata agataaaaaa aatccgcgta gaatcaagtg
     8881 gctttgctac tgcaaacgca aaaagtattg cagatgttat taaaagctta aacaatgaag
     8941 aagttgtttt agaaaccatt gataattttt tatttataag acaaaaaagc acaaaatata
     9001 aacttcctat gtttaatcat gaagattttc caaattttcc aaatacagaa ggaaaaaacc
     9061 aatttgacat tgattcaagt gacttaagtc gttctcttaa aaagatatta ccaagtattg
     9121 atacaaacaa cccaaaatac tccttaaatg gtgcattttt agatataaaa acagataaaa
     9181 ttaacttcgt aggaactgat acaaaacgcc ttgcaatcta tactttagaa aaagcaaata
     9241 atcaagaatt tagttttagt atccctaaaa aagctattat ggaaatgcaa aaacttttct
     9301 atgaaaaaat agaaattttt tatgatcaaa atatgcttat tgctaaaaat gaaaactttg
     9361 aattctttac aaaacttatt aacgataaat ttccagatta tgaaaaagtt ataccaaaaa
     9421 ctttcaaaca agaactcagc ttttcaactg aagattttat agatagtctt aaaaaaatca
     9481 gcgttgtaac tgaaaaaatg aaacttcatt ttaacaaaga taaaatcatc tttgaaggta
     9541 taagtttaga caatatggaa gcaaaaacag agcttgaaat tcaaacagga gtaagtgaag
     9601 aatttaatct tactataaaa atcaaatatt tacttgattt cttaacttct atagaagaag
     9661 aaaaattcac tttaagtgta aatgaaccta attcagcatt tatagtcaaa tcccaaggac
     9721 tatcaatgat tattatgcct atgattttgt aataaaacaa gtaaaagata aaggaaaaat
     9781 atgcaagaaa attacggtgc gagtaatatt aaagtcctaa aaggcctaga agctgttaga
     9841 aaacgcccag gtatgtatat aggagataca aacataggcg gacttcatca tatgatttat
     9901 gaagttgtgg ataattctat cgatgaagct atggcaggac attgtgatac tatagatgta
     9961 gaaatcacta ctgaaggaag ctgtatagtt agtgataatg gtcgtggtat tcctgttgat
    10021 atgcacccaa ctgaaaatat gccaacttta actgttgttt taactgtcct acatgcaggg
    10081 ggaaaattcg ataaagatac ttacaaagtt tcaggcggtt tgcacggtgt tggggtttca
    10141 gttgtaaatg cactctctaa aaaacttgta gctacagttg aaagaaatgg agaaatttat
    10201 cgtcaagaat tttcagaagg taaagttatc agtgaatttg gtgtgatagg aaaaagtaaa
    10261 aaaacaggaa caactataga attttggcct gatgatcaaa tttttgaagt gactgaattt
    10321 gattatgaaa ttttggctaa aagatttcgt gaacttgcat acttaaatcc aaaaatcact
    10381 ataaatttta aagataaccg cgtaggcaaa catgaaagtt ttcactttga aggtggaatt
    10441 tctcagtttg ttatagactt aaataaaaaa gaagctttaa ctaaagcaat tttctttagc
    10501 gtagatgaag aagatgtgaa tgttgaagta gctttgcttt acaatgatac ttatagtgaa
    10561 aatttactct cttttgtaaa taatatcaaa actccagatg gtggaacaca cgaagctggt
    10621 tttagaatgg gtttaactcg tgtgataagt aactatatag aagcaaatgc aagtgctaga
    10681 gaaaaggata ataaaatcac aggcgaagat gtgcgtgaag gcttgatcgc tgttgtgagt
    10741 gtaaaggtgc ctgaaccaca atttgaagga caaaccaaag gaaaacttgg ttcaacttat
    10801 gtgcgtccta tagtttcaaa agcaagtttt gaatatttga ctaaatattt tgaagaaaat
    10861 cctatcgaag ctaaagctat aatgaacaaa gccttaatgg cagctagagg aagagaagca
    10921 gcgaaaaaag ctagagaatt aacgcgtaaa aaagaaagtt taagcgtagg aactttacca
    10981 gggaaattag ctgattgtca aagtaaagat ccaagtgaaa gtgaaattta tcttgtggaa
    11041 ggggattctg caggaggttc tgcaaaacaa ggtagagaaa gatctttcca agctatactg
    11101 cctttgcgtg gtaaaatttt aaatgttgaa aaagcaagac tagataaaat tttaaaatct
    11161 gagcaaattc aaaatatgat tacagctttt ggctgtggta taggtgaaga ttttgatctt
    11221 tcaaaactta gatatcataa aatcatcatc atgacagatg cggatgttga tggatcacat
    11281 atacaaacct tgcttttaac tttcttcttc cgttttatga atgaacttgt agcaaatgga
    11341 catatttatc tagcacaacc acctttatat ctttataaaa aagctaaaaa gcaaatttat
    11401 ttaaaagatg aaaaagcttt gagcgaatac ctgatagaaa caggaataga aggtttaaac
    11461 tatgaaggta taggaatgaa tgatttaaaa gattatttaa aaatcgttgc agcttatcgt
    11521 gcgattttaa aagatcttga aaagcgtttt aatgtgattt ctgtgatacg ctatatgata
    11581 gaaaattcaa atttagttaa aggaaataat gaagaattat ttagtgtaat caaacaattt
    11641 ttagaaacac aaggacacaa tatcttaaat cattatatca acgaaaatga aattcgagct
    11701 ttcgttcaaa ctcaaaatgg cttagaagaa cttgtgatca atgaagaact tttcactcat
    11761 ccactatatg aagaagcaaa ttatattttt gataagatta aagatagagg cttggaattt
    11821 gataaagata ttttagaagt tcttgaagat gttgaaacca atgctaaaaa aggtgctact
    11881 atacaacgct ataaaggttt aggggaaatg aatcctgagc aactttggga aactacaatg
    11941 gatccaagcg taagaagact tttaaaaatc actattgaag atgcacaaag tgcaaatgat
    12001 acctttaatc tctttatggg tgatgaggtt gaaccaagac gcgattatat ccaagcacac
    12061 gctaaagatg taaagcattt ggatgtgtaa atttatcatt gaagaaatca tttcttcaat
    12121 gagttttgtt ttgtaagaat atagctagag gaattcttct tcttgtatcg tatttttctc
    12181 cataatattt ttcaagataa tttaaaattt tttcttcatc ttcaggttct atttcccaaa
    12241 gtccttcact atcttgcatc catcttatag ctgctaacca agctttttta cttgcatgca
    12301 tattagtaat gagattggat ccatgacaag ctaaacaatt tgcttccact aaaggtgaat
    12361 caggatcgat aatcaatcct gtatcagggt taatttcaag attttgagcc caacttgcac
    12421 ttaaaaacaa tgctaagatc aatataattt ttttcatact taaactccat aaacattaac
    12481 tctatggcat gcattattga tatatcctcc tggattccac tgtgctaaaa ccataggttg
    12541 actgttacct tgactatcga tagctcttgc ccaaatttca taatatcctt ttgttggtat
    12601 tgatatttga gcactccatt tttgccatgc taatctattt aatggttttt ctacctttgc
    12661 tttagtccat gttacgccat aatcattgct tacataaact tcactaactt caagttctcc
    12721 agcccaagct ttacctctaa cttcaaattt tttatttgct tttatttcag aaccattttt
    12781 gatattagta attacagatc ttataggcat tgattctatg attttcatct cgcctttata
    12841 gttaaaatct cctggtttta ccggatttac aggaacttta taagaacctt ccattttttc
    12901 accatcatga attttatttc ttactgaaat tttataaagc catttaccgc ttgtacttgc
    12961 agggtaacca ccacaaacaa gtctaagtgg atagccattg actaaaggaa tatctttgcc
    13021 ttcataagcc caagctatta gagtttcatc ttgtaaagct ttagaaatag gaactcctct
    13081 actaataggt gaagtttctt caccatttaa ttttgtatct atgccataat atccgatata
    13141 aaccgcatca tttttgatgc cacaatcttt taaaatatct tttaaacgca ctcctgtcca
    13201 tctaccgcaa gctactgcac cataacccca ttgagttcct tttgtgctag gtataacttc
    13261 ggatctacca tttccaccgc attcaactgt taaggcataa gtataggttt taaatttctt
    13321 ttttaaatct tctatggtgt aagatttttt attgataatg ctttctccat cgatttctaa
    13381 agtccaacct ttgtgaagtc tttcttttat cgtttctagg cttggtggta agccattatt
    13441 tctaacaaag aaattttcag gtttagtaaa atcagaatca agagcataaa tttcagtttc
    13501 tgctgttaat ggtttttcgc catggtagat aagatctttt ttaccttcta ttttaaaatc
    13561 aggcaattct tttgccaaag ccttacttcc taaaaaattc tcaaaagaaa aatttgacaa
    13621 tacactaatg ccaaataaac caagtcctat attttttaga aagtctctac gattttcttt
    13681 ttgatcgttc tgtttcattg aaatatcctt atat
//
LOCUS       DAPIWB010000045        13674 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.046, whole genome shotgun sequence.
ACCESSION   DAPIWB010000045 DAPIWB010000000
VERSION     DAPIWB010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13674)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13674)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13674
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.046"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            42..1292
                     /locus_tag="RJ266_001159"
     CDS             42..1292
                     /locus_tag="RJ266_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="HDV7354904.1"
                     /translation="MNTPKWTSHDARWVLSLFGTAIGAGVLLLPISAGLGGLIPLLVI
                     LVLAFPMTYLAHRNLCRFVLSSSNPKDDITFVAESYFGKGGGFLITLLYFFAILPILL
                     VYSANLTTTLLEFLINQFNFNADLTHAARWWVSFLIVGVLVLISILGENVVTKAMSFL
                     VFPFIIFLFIFSLLLIPQWNLSLFANVDFSVISTSNFWVTLWLVIPVMVFSFNHSPII
                     SSLACYCKKEYGDYAEPRARKIISLAIILMVFVVMFFVFSCALTFTPEDFASAKDQNI
                     NILTFIANKFPEVSLLAYVGPIVALVAISKSFLGHYLGSQEGLNGILYKASNGKIQGK
                     FAQTLTAIITFAIAWLVAYKNPSVIGIIEAIGGPVLAILLFLMPLYCIYRFDILARFR
                     NKFLDLFILVMGIVAISAAIHDLL"
     gene            1307..2671
                     /locus_tag="RJ266_001160"
     CDS             1307..2671
                     /locus_tag="RJ266_001160"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HDV7354905.1"
                     /translation="MSNLSIFKIGVGPSSSHTLGPMLAGNLFCKKVAKKLDEIDRVEV
                     TLYGSLSLTGKGHLSDKAVIWGLNGLEAKNLSAAIQDEVNKNAIENAQIDFCGEKKLC
                     FNYEKDLIFSKDFLPLHENGMKIKAYDCKGGLVDEETYYSVGGGFVLTAAQLEKKGKN
                     SNQNKKKKLDIELNNAKEALELCDKRDWDLAELSYRYELQFHTKEEIRAYCLEIWEVM
                     QEVYYNGTHPNEDYLPGKLHLKRRAKGLKERVAMTADPMGIIDFISLYAIAIAEENAS
                     GAKVVTAPTNGACAVIPAVMLYLKNHTIGFSDEKAIEFLLTAMLIGSFYKKNASISGA
                     EAGCQAEIGSASSMAAAAMATVLGANAFKACNAAEMAMEHHLGLTCDPVAGLVQIPCI
                     ERNAFGAIKAISAARMAMTRKSTPMVSLDEVIETMYETGKDMNYKYKETSLGGLATNL
                     KTVC"
     gene            complement(2679..3200)
                     /locus_tag="RJ266_001161"
     CDS             complement(2679..3200)
                     /locus_tag="RJ266_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354906.1"
                     /translation="MAFMNFSGFFYARNDLRLFKIEKKNELKSFFYKDYTLSSYKDAL
                     NLNNEIFFYQSLKEGLFKKNDEILVSNLGKKIILFRNFTQNCDNFNEAKLKQILLLFF
                     LLLASVFFASLAMINEFGAIDLVFLMICLLLLVMGAINLGLLFKQIRILKSFSKEEMK
                     EFLSQRMKKYTKV"
     gene            complement(3181..4191)
                     /gene="ribD"
                     /locus_tag="RJ266_001162"
     CDS             complement(3181..4191)
                     /gene="ribD"
                     /locus_tag="RJ266_001162"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HDV7354907.1"
                     /translation="MSNFKIQGRQMKEFYMNLALNEAWKYQFLTYPNPAVGCVILDKN
                     GKILAIKAHEKAGLAHAELNAITHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSI
                     AFVTLEPCSHQGKTPPCAKLFSELGFKKIFISVKDGNKIASGGAEFLKKQGIEVEFDI
                     LKEEGKKLLKPFLKWQKGQFKLFKLALSMNGSPFGKIVSNELSRTYAHKIRAVIDLLV
                     VGGETIRKDHPILDARLCKAKAPNLCILSRQNIDNFDKNIPLFKVPNRQIYTQIPSEA
                     KFLMYEGGENFLKTFKDGIDMFLIFQSSSLNDEKNVTIPLNFKPLYRNFLGSDTYGIY
                     EL"
     gene            complement(4394..4481)
                     /locus_tag="RJ266_001163"
     tRNA            complement(4394..4481)
                     /locus_tag="RJ266_001163"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4445..4447),aa:Ser,seq:tga)
     gene            complement(4503..4576)
                     /locus_tag="RJ266_001164"
     tRNA            complement(4503..4576)
                     /locus_tag="RJ266_001164"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4542..4544),aa:Cys,seq:gca)
     gene            complement(4595..4683)
                     /locus_tag="RJ266_001165"
     tRNA            complement(4595..4683)
                     /locus_tag="RJ266_001165"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4647..4649),aa:Leu,seq:taa)
     gene            complement(4693..4767)
                     /locus_tag="RJ266_001166"
     tRNA            complement(4693..4767)
                     /locus_tag="RJ266_001166"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4733..4735),aa:Gly,seq:gcc)
     gene            complement(4839..5591)
                     /locus_tag="RJ266_001167"
     CDS             complement(4839..5591)
                     /locus_tag="RJ266_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354908.1"
                     /translation="MLAFFKGLGIGFLCLLLFVAGVVFNVEFLGKKDSNHDLYFSRNI
                     EVSNTLKPDILYANINFWANENLSSKITLDNSEKAEITNTFNQILERSKKENFCSGGS
                     FSLEPNFSYKDGIQTPKGQRFDANLECEFKENQLADFNKLLNDINSIIAKNNFISVST
                     PAIQTKFSKDTLNNNKENLYKELLKTSYEYEKTYSLDLNKTCVLKNLQVNTNTNIAPR
                     MLNAKSDNIELSSPIISEKEQILSAKALFICK"
     gene            5664..6683
                     /gene="mutY"
                     /locus_tag="RJ266_001168"
     CDS             5664..6683
                     /gene="mutY"
                     /locus_tag="RJ266_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HDV7354909.1"
                     /translation="MQKKELEKLQENLLLWYKKNGRKTLPWRNLQSQNCDESLKHIDR
                     AYGVYISEIMLQQTQVKSVLERFYFPFLQKFPTLESLANANEDELLKAWQGLGYYTRA
                     RNLKKAALECVDKFEAKLPKEVEDLKKLSGIGAYTAGAIACFGYDQKVSFVDGNIRRV
                     LSRLFALENPSMKELEKRAKELLNLNHAFDHNQALLDIGALVCVSKNAKCGICPLYDF
                     CQGKFHTELYPRAKKILYESVNLNLFLFEFNKKFAIGQSQDKLYKGMYNFPFFKEGEY
                     KLSKDMGFVGEFKHSYTKYKLNIKVYHQILNNENKNYEFKTLKELESTALSALSLKAL
                     KLIKL"
     gene            complement(6669..7928)
                     /locus_tag="RJ266_001169"
     CDS             complement(6669..7928)
                     /locus_tag="RJ266_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7354910.1"
                     /translation="MQELTRTKKIRSIIAASSGNLVEWFDFYIYAFTATYFAHTFSTS
                     DNPVIQQINAFGVFAAGFFMRPIGSWLFGSLADKVGRKKSMVISVVLMALGSFMIAAL
                     PSKDTVGDLAIILLLIARLIQGLSVGGEYGIAATYLSELATEGKRGFYSSFQYVTLIG
                     GQLLAVASISIMFLFFSIDDMKDYAWRILFVIGGILALGSLFVRKMMNESATKLHQHE
                     DRGALKALCKSWKPFLMVLGVTSGGSLAFYTITTYTKTFMENTGMDKMLVNNLFLGAL
                     FILMIIQPLFGYIGDKIGHKRSLIVFCILALVGIYPIFSLIANNAQNNPSLTFMLVVL
                     LFVILSFYTSVAGIFKAKLFPEHVRALGTGLGYAISNAVFGGSAPWVALQFKNAGIEN
                     GFFIYIAIFTIIMLIATLCLPKKSELN"
     gene            8094..8951
                     /locus_tag="RJ266_001170"
     CDS             8094..8951
                     /locus_tag="RJ266_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM/SPASM domain-containing protein"
                     /protein_id="HDV7354911.1"
                     /translation="MKFKKIYIELSDICGLKCDFCPSRKGIRGVMSEEKFQNLAHEIS
                     NKAELFTFHLLGDPLLLPNLENYLKIAKSEAMKLEITTSGFYLNSKNQALLLGYENIH
                     QINISLMSFLSQSKISLEQYFKPILELCKKHLEQKSLSFINLRLWNLDANFKVPKSNL
                     KIYEFLAKEFEVKIDTNLSKNRLQRHILLHQNKLFKWPNLKDEPLYKKGKCHALKEQI
                     GILSDGSLVPCCLDTKADINLGNVFENNFDKLFKSPRIKMMKKAFEEDKRIEKLCQTC
                     EFFKARLGD"
     gene            complement(8948..9754)
                     /locus_tag="RJ266_001171"
     CDS             complement(8948..9754)
                     /locus_tag="RJ266_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDV7354912.1"
                     /translation="MKKILIIMSLFLITLNAKERLVVLDPASIETLFMLKAEDQIVGI
                     ATLQHSNIYPKDQTSKLTSVGTFSNPSLEKIVALKPSLVILSSYSLNLEEGLKNFGIK
                     SINLKAERLEDITKNITTLGQITKKEKEAELLKQEFTQNLKKLSDKPLNKSVIYLYSS
                     NPLMAFNDNSLIADILRLIGIKNLSPQSQISRPVISAEYILKQNPDILILGINAKNNL
                     LDTNALLKNTKAVKTGSIYFNKDTHILLRLSPKIIDRIQEFKTKLENNNF"
     gene            complement(9751..10527)
                     /locus_tag="RJ266_001172"
     CDS             complement(9751..10527)
                     /locus_tag="RJ266_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7354913.1"
                     /translation="MLKIHDLSFAYHQKDLLKNIHLELKNQAFIGILGPNGSGKSTLL
                     KLILKNLSPNKGEISLFNTNIKDFSLKEFAKICGFVPQKSELNTPLKVIDVLLMSKYA
                     NLKHAFSSYSKEDILEIKEFAKDLRLENFLERSILSLSGGEFQRMLLARALLKKPKIL
                     FLDEPTSALDLNYAIELLSLCEKRVKEKNIAVVAILHDLNLASMFCDKILFLKEGEIK
                     YFGTSKELFTQEILKEIYDLNCEIIYKNSKPYILALKEKK"
     gene            complement(10527..11513)
                     /locus_tag="RJ266_001173"
     CDS             complement(10527..11513)
                     /locus_tag="RJ266_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDV7354914.1"
                     /translation="MLNLNTHSKILVIIGLLVAYIIASFIALCLGDENLNPKELFSYI
                     FSQDEILRQIIIDGRLPRIIMAILIGMLLASSGAITQNVFSNPIADPYIIGIASAATF
                     GAVLAYLLKLNDYYYGILGFVCSAFFALGVFKISSKASIATLLIIGIAASSFLGAFTS
                     FFTYLIGEDSFKIVAWLMGNIGNASWFRVGILILPLIFCLFYFYAHKNELNILLSGDD
                     EARNLGVNAQKLKINLLIVSSLAVSFAVAFSGLIGFVGLIIPHTIRLLLKNYDNALVI
                     PLCTAFGGLFLLICDTLARTLLAPVQIPIGILTAFFGAPIFLYLALSARRFL"
     gene            complement(11488..13612)
                     /locus_tag="RJ266_001174"
                     /pseudo
     CDS             complement(11488..13612)
                     /locus_tag="RJ266_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344983.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
BASE COUNT         4597 a         2052 c         2180 g         4845 t
ORIGIN      
        1 ctaaaataaa agagatgtaa tcttaaattt aaggaagaat aatgaatact cctaaatgga
       61 ctagtcacga tgcaaggtgg gttttatctc tttttggaac agctattgga gccggcgtac
      121 ttttgttacc tattagtgct gggcttggtg gattgatacc tttgttagtt atacttgttt
      181 tagcttttcc tatgacttac ttagctcata gaaatttatg tcgctttgtg ctttcaagtt
      241 ctaatccaaa agatgatatt acttttgttg cagaaagtta ttttggcaag ggcggtggat
      301 ttttaattac acttttgtat ttttttgcta ttttgcctat tttattggtt tatagtgcta
      361 atcttacaac aactttgctt gagttcttaa tcaatcagtt taatttcaat gcagatctta
      421 ctcatgctgc tcgttggtgg gtgagttttt tgattgttgg agttttggtt ttgatttcta
      481 ttcttggtga aaatgttgta acaaaagcaa tgagttttct tgtttttcct tttattatat
      541 ttttatttat tttttcattg cttttaattc cacaatggaa tttatcgtta tttgcaaatg
      601 ttgatttttc cgtaatttca acaagtaatt tttgggttac tttatggctt gttattcctg
      661 tgatggtatt tagttttaat cactctccta tcatttcttc acttgcttgt tattgtaaaa
      721 aagaatatgg tgattatgct gaacctcgcg ctagaaaaat tatttctttg gcaattattc
      781 ttatggtttt tgttgtaatg ttttttgttt tttcttgtgc tttaaccttt acaccagaag
      841 attttgcatc agcaaaagat caaaatatca atattcttac ttttatagca aataaatttc
      901 ctgaagtttc tttactagct tatgttgggc ctattgttgc acttgtggct attagtaaaa
      961 gtttcttagg acattatctt ggttctcaag aaggcttaaa tggcatttta tataaagcaa
     1021 gtaatggtaa aattcaaggt aaattcgctc aaactttaac agcgatcatt acctttgcta
     1081 tcgcttggct tgttgcgtat aaaaatccaa gtgttatagg aattatcgag gctattggtg
     1141 gtcctgtttt ggctattttg cttttcttaa tgccgcttta ttgtatttat cgttttgata
     1201 ttttggcaag atttcgtaat aaatttttag atctttttat tttggtaatg gggatagttg
     1261 caatttctgc tgcaattcat gatcttttat aaattaagga taaaaaatga gtaatttaag
     1321 catttttaaa ataggtgttg gtccttcttc ttctcatact ttagggccta tgcttgctgg
     1381 aaatttattt tgtaaaaaag tcgctaaaaa gcttgatgaa attgatagag ttgaggttac
     1441 tctttatggt tctttgtcat taacaggtaa aggacacttg agtgataagg ctgtaatttg
     1501 ggggttaaat ggcctagaag ctaaaaattt aagcgcagca atacaagatg aagtaaataa
     1561 aaatgctatt gaaaatgctc aaattgattt ttgtggtgag aaaaaacttt gttttaatta
     1621 tgaaaaagat ttgatatttt ccaaagattt tttaccttta catgagaatg gtatgaagat
     1681 taaagcttat gattgtaaag gtgggttagt tgatgaagaa acttattatt ctgtaggtgg
     1741 aggctttgtt ttaacagctg cacaattaga aaaaaaaggt aaaaattcca atcaaaataa
     1801 aaagaaaaaa ctagatatag agcttaacaa tgcaaaagaa gctttagagc tttgcgataa
     1861 aagagattgg gatttagcag agctttctta tcgttatgaa ttgcaatttc acactaaaga
     1921 ggaaattcgt gcttattgtc ttgaaatttg ggaagtaatg caagaagtgt attataatgg
     1981 tacgcatcca aatgaagatt atttgcctgg aaaacttcat ttaaagcgta gagccaaagg
     2041 acttaaagaa agagtggcga tgacagctga tcctatgggc attatagatt ttatttcttt
     2101 atatgctatt gcgattgctg aagaaaatgc tagcggagca aaagttgtaa ccgcgccaac
     2161 aaatggagca tgtgctgtta tccctgctgt tatgctttat cttaaaaatc atactatagg
     2221 ttttagcgat gaaaaggcta tagagttttt attaacagca atgcttatag gttcttttta
     2281 taagaaaaat gcaagtatta gcggagcaga agcaggttgt caagcagaaa ttggtagtgc
     2341 tagttcgatg gcagctgcgg ctatggcaac agttttaggg gctaatgctt ttaaagcatg
     2401 caacgctgct gaaatggcaa tggaacatca tctaggttta acttgcgatc cagttgcagg
     2461 acttgtgcaa attccttgca tagaaagaaa tgcctttgga gctattaagg ctataagtgc
     2521 tgctagaatg gcaatgacac gtaaatctac tcctatggta agccttgatg aggttataga
     2581 aaccatgtat gaaacaggaa aagatatgaa ttataaatac aaagaaactt ctttaggtgg
     2641 tcttgctaca aatttaaaaa cagtatgcta aagtgttttt acactttagt gtattttttc
     2701 atcctttgac ttaaaaattc tttcatttct tctttggaaa aacttttaag aatacgaatt
     2761 tgcttaaaaa gcaagccaag attgattgct cccatcacta aaagcaataa gcaaatcatt
     2821 aaaaaaacaa gatctatggc tccaaattca ttaatcatag ccaaacttgc aaaaaataca
     2881 ctcgctaata ataaaaaaaa taaaagcaat atttgtttta attttgcctc attaaaatta
     2941 tcacaatttt gagtgaaatt tctaaaaagt atgatctttt tacccaaatt tgaaactaaa
     3001 atttcatcat tttttttaaa taagccttct tttaaacttt gataaaaaaa gatttcattg
     3061 tttaaattta aagcatcttt gtagcttgat aaggtgtagt ctttgtaaaa aaaggatttt
     3121 aattcatttt tcttttctat tttaaataat cttaaatcat ttctcgcata aaaaaatcca
     3181 ctaaagttca taaatgccat aagtatcact ccctaaaaaa ttcctataaa gtggcttgaa
     3241 atttaaaggt attgtaacat ttttttcatc atttaaactt gaactttgga aaatcaaaaa
     3301 catatctatt ccatctttaa aggttttgag aaaattttct ccaccctcat acattaaaaa
     3361 ttttgcttca cttggaattt gggtataaat ttggcggttt ggaactttaa ataaagggat
     3421 atttttatca aaattatcta tattttgacg gcttaagata caaagattag gcgcttttgc
     3481 tttgcaaagc ctagcatcta gtataggatg atcttttctt atggtttctc caccgactac
     3541 aagcaaatca atcaccgctc taattttatg tgcataagtg cgacttagct cattgcttac
     3601 gattttgcca aaaggcgagc cattcataga aagggctaat ttaaaaagtt taaattgccc
     3661 tttttgccat tttaaaaaag gttttaaaag tttttttcct tcttctttaa gtatgtcaaa
     3721 ttcaacctct atgccttgtt tttttaaaaa ttcagcccca ccacttgcga ttttatttcc
     3781 atctttaacg ctgatgaaaa tttttttaaa acctagctcg ctaaagagtt ttgcacaagg
     3841 aggcgttttt ccttgatgag agcaaggctc aagtgtgaca aaagctatgc tatctttaaa
     3901 tacaccttga tggtttttgc aaataaactc atgcaaggcg tttgcttctt taggcaatga
     3961 aatttcaggt cttaagcttt taaaagcatg agttatggca ttaagttctg catgagctaa
     4021 tccagctttt tcatgagctt ttatggctaa aatttttcca tttttatcta agattacaca
     4081 gcctacagcc ggatttggat aggttaaaaa ctgatatttc caagcctcat ttaaggctaa
     4141 attcatataa aattctttca tttgcctacc ttgtatttta aaatttgaca tatttttaaa
     4201 attttatatt tttgttttaa gataataaat tctaaatttt ccatttgtat ttcttatttt
     4261 tagttatatt agttatagtt tttctaagtt ttttaggata taacaaaaat agtaagactg
     4321 aagtattatt tttcatttgt agtatccttt ataatttcag gaatgatata attgataaac
     4381 tagaaagtct tggtggccgg gagaaaggga ttcgaacccc tggaggtgtg accctcaacg
     4441 gttttcaaga ccgccgcttt cgaccactca gccatctccc gataaagtaa agttttgcct
     4501 tttggaggcg acatccggat tcgaaccgga gatcaaggct ttgcaggccc atgccttacc
     4561 gcttggctat gtcgccctga taatgttgaa aaagtggtgc ccgaggccgg acttgaaccg
     4621 gcacggaaga aaaattccga gggattttaa gtcccttgtg tctaccaatt ccaccacccg
     4681 ggcgggtgat tatggagcgg gaaacgagat tcgaactcgc gaccccaacc ttggcaaggt
     4741 tgtgctctac ccctgagcta ttcccgcata aatttctgaa agaattgaag ataaaagtat
     4801 agcaaaataa acttaaaagg agtttatttt gccttaagtt atttgcaaat aaataaagct
     4861 ttcgcgctta aaatttgttc tttttcgctg ataattggag atgaaagttc tatattgtca
     4921 gattttgcat ttaacattct aggtgcgata ttggtattgg tatttacttg taaatttttc
     4981 aatacacaag ttttattaag atctaaagag taagtttttt catattcgta tgatgttttt
     5041 aaaagctctt tgtagagatt ttctttgttg ttgtttagtg tatcttttga aaattttgtt
     5101 tgtatggctg gtgttgaaac gctgatgaaa ttatttttag ctatgataga attgatgtca
     5161 tttaaaagct tgttaaaatc tgcaagttgg ttttctttaa attcacattc taaattcgca
     5221 tcaaatcttt gaccttttgg agtttgtata ccatctttat aggaaaaatt aggttctaaa
     5281 gaaaaacttc ctccgctaca aaaattttct ttttttgagc gttctaaaat ttgattgaaa
     5341 gtatttgtga tttcggcttt ttcactattg tctaatgtga tttttgagct taaattttca
     5401 tttgcccaaa aattaatatt tgcatataaa atatcgggtt ttagtgtatt gcttacttct
     5461 atatttcttg aaaaatataa atcatgatta gagtcttttt tgcctaaaaa ttctacatta
     5521 aaaactactc ctgcaacaaa aagtaataaa cataaaaaac ctatacctaa acctttaaaa
     5581 aaagctaaca tggatatcct taataattta atttgagcta attttagcaa aaaattttaa
     5641 aattttttgt tatactctca tttatgcaaa aaaaagagct tgaaaaacta caagaaaatt
     5701 tacttctttg gtataaaaaa aatggacgca aaactttacc ttggcgtaat ttacaaagtc
     5761 aaaattgtga tgaaagttta aagcatattg atagagctta tggagtttat atcagcgaaa
     5821 ttatgcttca gcaaactcaa gttaaatcag ttttggaaag gttttatttc ccctttttgc
     5881 aaaaatttcc tactttagaa agtttggcta atgctaatga agatgagctt ttaaaggctt
     5941 ggcaaggact tggttattat actcgtgcta gaaatttaaa aaaggcagct ttagaatgtg
     6001 tggataagtt tgaagctaaa ttacccaaag aagttgagga tctaaaaaaa ttaagcggta
     6061 taggagctta tacagcaggc gctatagctt gttttggtta tgatcaaaag gtttcttttg
     6121 ttgatggtaa tatacgccgt gtgctttctc gtctttttgc tttagaaaat cctagcatga
     6181 aagaacttga aaaaagagct aaagagcttt taaatttaaa tcatgctttt gatcataacc
     6241 aagccttgct tgatataggg gctttggttt gtgtgagtaa aaatgcaaag tgtgggattt
     6301 gtcctttgta tgatttttgt caaggcaaat ttcatacaga gctttatcca agagctaaaa
     6361 aaatacttta tgagagtgta aatttaaatc tttttttgtt tgaatttaat aaaaaatttg
     6421 ccatagggca aagccaagat aagctttata agggtatgta taattttcct ttttttaaag
     6481 aaggagagta taaactttct aaagatatgg gttttgtagg ggagtttaag cacagctata
     6541 ctaagtataa acttaatatc aaggtttatc atcaaatttt aaacaatgaa aataaaaatt
     6601 atgaatttaa aaccttaaaa gagttagaaa gtaccgcact ttcggcactt tctttaaaag
     6661 cgttaaaatt aattaagctc tgatttttta ggcaaacata aagtagctat aagcatgatg
     6721 attgtaaaaa tagctatata tataaaaaag ccattttcta tacctgcatt tttaaattgt
     6781 aaagcaaccc aaggagcaga tcctccaaaa acagcatttg aaatagcata acccaaacct
     6841 gtccctaaag ctcttacatg ttcaggaaaa agttttgctt taaaaatccc agcaactgaa
     6901 gtataaaaac ttaaaataac aaacaataat accaccaaca taaatgtcaa agaaggatta
     6961 ttttgtgcgt tattggctat aagtgaaaaa ataggataaa ttcctaccaa tgccaaaata
     7021 caaaatacaa ttaaagatcg tttgtgacct attttatctc ctatatatcc aaaaagaggt
     7081 tgaatgatca ttagtataaa taaagcacct aagaaaagat tattaacaag cattttatcc
     7141 atacccgtat tttccataaa agttttagta taagttgtaa tagtataaaa agctaaagaa
     7201 cctccagaag taaccccaag caccattaaa aaaggtttcc aagatttgca taatgctttt
     7261 aaagcaccac gatcttcatg ctggtgaagt tttgtagcac tttcattcat catttttctt
     7321 acaaaaagcg agcctagtgc taaaattccg cctattacaa aaagtattct ccaagcataa
     7381 tctttcatat catcaatgct aaaaaataaa aacattatac taatgcttgc aacggccaaa
     7441 agttgaccgc ctattagggt tacatactga aaagatgagt aaaaaccgcg ttttccttct
     7501 gtagcaagtt ctgaaagata agtagctgct atgccatact ccccgcctac actaagacct
     7561 tgaatgagtc ttgctattaa aagtaagata atagcaagat ctcccactgt atctttgctt
     7621 ggcaaggctg ctatcataaa agagcccaaa gccattaaaa ccactgatat aaccatagat
     7681 tttttacgac ctactttatc agctaaagag ccaaaaagcc aagagcctat aggacgcata
     7741 aaaaaccctg ctgcaaaaac cccaaaggca ttgatttgct ggataacagg attatctgaa
     7801 gttgaaaaag tatgagcaaa ataagttgct gtaaaagcgt agatataaaa gtcaaaccac
     7861 tctactaaat ttccgctact tgcagcaata atagagcgaa tttttttcgt gcgagtaagc
     7921 tcttgcataa acccttcctt aattttagat ttttatttaa gtatagtgtg atttttgttt
     7981 aatatattta aaaataaaga agagaaataa aaaagataaa aatatcgata aaaatgttac
     8041 atattttaat aaatttcata aattttggta aaatgtttac tctaggaaat ataatgaaat
     8101 ttaaaaaaat atatatagaa ttaagtgata tttgtggttt aaaatgcgat ttttgtcctt
     8161 ctcgaaaagg aattcgcggg gtaatgagtg aagaaaaatt tcaaaactta gctcatgaaa
     8221 tttctaataa ggctgagctt tttacctttc atcttttggg cgatcctttg cttttaccta
     8281 atttggaaaa ttatctaaaa atcgcaaaaa gtgaagctat gaagcttgaa atcactacaa
     8341 gtggctttta tttaaattct aaaaatcaag ctttattgtt agggtatgag aatatccatc
     8401 aaatcaatat ttctttaatg tcttttttaa gtcaaagcaa aatttcttta gaacagtatt
     8461 ttaagcctat tttagaactt tgcaaaaagc atttagagca aaaaagcctt tcttttatca
     8521 atctaagact ttggaattta gatgctaatt ttaaagtacc taagtcaaat ttaaaaattt
     8581 atgagttttt agccaaagaa tttgaagtta agattgatac aaacttaagt aaaaatcgct
     8641 tgcaaagaca tattttgctt catcaaaata aactttttaa atggccaaat ttaaaagatg
     8701 aaccccttta taaaaaagga aaatgtcatg ctttaaaaga gcaaattggg attttaagtg
     8761 atggaagttt ggtgccttgc tgtttggata ctaaagcaga tattaactta ggaaatgttt
     8821 ttgaaaataa ctttgataag ctttttaaat caccgcgtat aaagatgatg aaaaaagctt
     8881 ttgaagaaga taaacgcata gaaaaacttt gtcaaacttg cgaatttttt aaagcaagat
     8941 tgggtgatta aaaattgtta ttttctagct ttgttttaaa ttcttgaatt ctatctatta
     9001 tcttaggact aagacgtaat aatatatgtg tatctttgtt aaaataaata cttcctgttt
     9061 taactgcttt ggtatttttc aataaagcat ttgtatctaa aaggttgttt ttagcattaa
     9121 ttccaagaat gagtatgtct ggattttgtt tcagtatata ttctgctgat ataacaggtc
     9181 ttgaaatttg actttgcgga cttaaatttt taatccctat aagtcttaaa atatcagcta
     9241 ttaaagaatt gtcattaaag gccattaaag ggttgctaga ataaagataa atcacacttt
     9301 tatttagggg tttatcgctt aattttttta aattttgggt aaattcttgt tttaaaagct
     9361 ctgcttcttt ttcttttttg gtgatttggc ctaaggttgt gatatttttt gttatatctt
     9421 ctaaacgctc ggcttttaaa ttgatacttt tgataccaaa atttttaagt ccttcttcta
     9481 aatttaaaga ataagagctt aaaatcacca aacttggttt taatgctact attttttcaa
     9541 gtgaaggatt tgaaaaagtg cctacacttg taagttttga ggtttgatct ttaggataga
     9601 tatttgagtg ttgtaaagtg gcaatgccta cgatttgatc ttcagcctta agcataaaaa
     9661 gggtttctat gcttgcagga tcaagcacta caaggcgttc ttttgcattt agtgtgatta
     9721 aaaacaaact cataataatt aaaatttttt tcattttttc tcctttaaag ctaaaatata
     9781 aggtttagaa tttttataaa taatctcgca gtttaaatca taaatttctt ttaaaatttc
     9841 ttgagtaaaa agctctttac tcgttccaaa atactttatt tccccttctt ttaaaaaaag
     9901 gattttatcg caaaacatag aagctaaatt taaatcatgc aagatagcaa caacggctat
     9961 atttttttct ttaactcgtt tttcgcaaag gcttaaaagc tctatagcat agtttaaatc
    10021 aagggctgaa gtgggttcat ctaaaaaaag aatttttggc tttttaagca aagctcttgc
    10081 taaaagcatt ctttgaaatt cacccccact taaagaaagt atgcttcttt ctagaaaatt
    10141 ttcaagtctt aaatccttag caaattcttt aatttctaaa atatcttctt tagaataaga
    10201 actaaaagcg tgttttaaat tcgcatattt actcattaaa agcacatcga tgacttttaa
    10261 aggggtgttt aattctgatt tttgaggcac aaagccacaa attttggcaa attccttaag
    10321 agaaaaatct ttgatatttg tattaaaaag acttatttct cctttatttg gacttaaatt
    10381 tttaagtata agttttaaaa gagtgctttt gcctgagcca tttggcccta aaattcctat
    10441 aaaagcctga tttttaagtt ctaaatgaat gttttttagt aaatcttttt ggtgataagc
    10501 aaaacttaaa tcatgtattt ttagcattat aaaaatctcc tagcgcttaa agccaaatat
    10561 aaaaaaatag gagctccaaa aaatgcagtt aggattccaa tcggaatttg tacaggggct
    10621 aaaagagttc ttgctaaagt atcacaaata agtaaaaata atcctccaaa tgctgtacat
    10681 aaagggataa ctaaggcatt atcataattt ttaagcaaaa gtcttatagt atgaggaatg
    10741 atgagtccaa caaagcctat aagtccgcta aaagcaaccg caaaagatac agccaaggat
    10801 gagacgatga gtaaatttat ctttaatttt tgagcattta cccctagatt tctagcttca
    10861 tcatctccgc ttaaaagtat gtttaattcg tttttatgag cgtaaaaata aaacaaacaa
    10921 aaaattaaag gtaagattaa aattcccaca cgaaaccaag aagcattgcc tatatttccc
    10981 ataagccaag cgactatttt aaaagaatcc tcgcctataa gataagtgaa aaaagaagta
    11041 aaagccccta aaaaagatga agctgctatg ccgataatga gtaaagttgc tatagaagct
    11101 ttagaagaaa ttttaaaaac ccctagagca aaaaaggcag agcaaacaaa acctaaaatt
    11161 ccataataat aatcattcaa ttttaacaaa tacgccaaaa ccgctccaaa ggttgccgca
    11221 gaagctatac ctatgatata aggatcagct ataggatttg aaaatacatt ttgagtgata
    11281 gccccactac tagctaaaag cataccgatt aaaatcgcca ttataatgcg tggtaagcgt
    11341 ccatctatga tgatttgtct taaaatttca tcttggctaa agatatatga aaaaagttct
    11401 tttgggttta aattctcatc tcctaagcaa agtgctataa aagaagcgat tatataagct
    11461 accaaaagcc ctataatcac taaaatttta gaatgcgtat ttaaattcaa catagtagtt
    11521 tctgccattc ccaactaggt attgatcatt tatactgtct tgataggtgt agtatctttt
    11581 atcgaaaaga ttgcgaattc ctgctaaaat ttgtaatttt ttataattat atttcatgcc
    11641 aatatctgtt aaaaaataat cccttatcca agaattttta gacatttttc ctgtattttc
    11701 atttatagtt ccaccatctt ttgctctaga aaaataggtt aaatcaacaa aatttgagaa
    11761 atttttattc caagcgtatt caagcccagc tgtggctttg atttttgaaa cataaggaat
    11821 tctcatgccg tcattaacac ctttagaaat tttagcatca agataagtta gactttctct
    11881 aaagattaaa tcatcatcta aaaaattttg actcagactt aattctactc ctaaacggcg
    11941 agtttgatct atgttataat attgccaaaa tcctccacct tttgcatgag ggtttccaag
    12001 ataagaaatt tcatctttgc ttagggtgta aaataaagtt agattaaagc cgtaaaaatc
    12061 ccaccaaaaa tcatcaattc ctagttcaaa ggtatcaaag atctcaggat ttaaatttgc
    12121 agaataatac ttttgtgaat tttgatcctt attgacaaat tgtgctggac ttggagagac
    12181 aaaacctctt tcgtatttga tataaagctt tcctgtgtct gagtatttaa aatttggagt
    12241 gatttcaaag gcgaagttat gacttgtatc atcggttgaa aaaagttctg gagggcttgg
    12301 tttaggaacg cttgatataa tcatattgct agtataattc ctatttgtgt cataaaaact
    12361 atattcgtat cttgctccac ctgaaatact aaaaatatca ttaaattcat gagaatcaag
    12421 agcgaaaata gaatggcttt gtttatccat atccataagc gttgtcatgg tatgactcat
    12481 ttgaaatctg ccggcattta catcataatg aataatgctt gttctttttg catcatggtt
    12541 tgcaaattca taaccaaaaa taaaataaga attatttgca taatttagct tgttttttaa
    12601 acttattcct gtaagtgtgt cttcaaaacc acttccattt tgatatacag ggacgctcag
    12661 ccccatagag ctcattgtag aaatatcttt tagatagttg atcttttgat tttgccaaaa
    12721 agcctctaga ttaaattccc atatatcatc aaaatagtaa tgataatcca aagaaatttc
    12781 agggcgattg atttgtgtga tattatcact cttacctttt tgagttggat tgctttgagc
    12841 ttgtgctttt gttagataac cactgctggt atttttgctt ttaaaataat tataacccaa
    12901 agttaaatcg ctattatcat tgatatcaat ataggttttt gtgttgataa aataaccttt
    12961 ttcattataa ccttcttgat atccatcaag gttaaaactt tgtatatcaa agctaaaagc
    13021 taaattttca tttatttgtt tggcgccatt gatacctaaa tttccaccta gtccaccatg
    13081 attataggca ctgcttttta aatttatagc aaaagcatct gatttttgtt tttttgtaat
    13141 gatattaatc accccccccc ctagtaccat ttccataaag cacagaccca cccccaggta
    13201 tgatttctat gcgttctaca ttatctaaat tgatactatc tagcggggtt acaccatggg
    13261 aattatcaag aacattaata gcacgcccat cgatcataac ttttacagct atattggact
    13321 tatctccttg tccacgcatg tctatattgc gtccaagtcc aaaatttaca aaactaatgc
    13381 ccgaaattct ttctaaggct tgttctaagg aaacataacc tttattttgc agatctttgc
    13441 cttctatgct gattacattg cgtaaatttg aatctgcatc ttgctcaaaa cctgttgcac
    13501 taacaacaac tttttgtaga ttgatagctt catttgattc ttgtgcattt aaattagtta
    13561 ttagtaataa tgcaaataaa gataacttaa aatctttttt attttggtgc aaattttact
    13621 ccttaaataa aataaataat gataatttat atcataataa tttagaacga aatt
//
LOCUS       DAPIWB010000046        13490 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.047, whole genome shotgun sequence.
ACCESSION   DAPIWB010000046 DAPIWB010000000
VERSION     DAPIWB010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13490)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13490)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13490
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.047"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..2085)
                     /gene="copA"
                     /locus_tag="RJ266_001175"
     CDS             complement(<1..2085)
                     /gene="copA"
                     /locus_tag="RJ266_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase CopA"
                     /protein_id="HDV7354915.1"
                     /translation="MEELRIKIGKMTCVNCSNAIERACKKIDGVKDASVSYVNSSGVF
                     LLEDQEKRKDIIAKIQNLGFEILEDEQSLNAYKAKKHLELRKNLLLSIVLSVIIMYFE
                     MFVKSSFSQNIQMALSFFGIFYCGRDFFSHAFLGFKSKNLDMNTLVALGTLSAFVYSF
                     LVYLQIFKEEDLYFSGAMMIISFVLLGKYLESKAKFKAQDYQRILENIDTKKTKILLE
                     DESIKEISSSFVKSGDVLLVKEGESIVADGVVLLGSAELDMSFLNGEFLPVLKKEGDE
                     VQAGAVVLNGALRIKANKKAMDSTLEQIKNLVFEAGSIKSPLANLADQISKYFVGGII
                     FFAFLVFVFWVLKADLNTAFLHSCAVLLISCPCALGLATPIALVVASANAAKNFILIK
                     NPAALEKLALVKYAFFDKTGTLTKENLSIFKHNLSKDDFDKLCQIESLSSHPIAKALH
                     KDHFFDLKGEGRVIVGSGIKYKEDNDIYLAGSAKFLHENEIDTKESDIFFDTFKEYIR
                     VYFAKNKKCLGGVLLSNALKDGAKELVLNLKKQNLKTFILSGDHVKNVEKIAKELQID
                     EFHAQLKSEEKLQIIQKFKKTLFVGDGINDAAALSVASVSMSFSKANELAKKTGDFIL
                     IKDDLSAIFKCFKLAKKTRGIIKLNLFWAFIYNVLCIPIAAGFISFISLSPHIAALAM
                     CFSSITVVLNSLR"
     gene            complement(2085..2279)
                     /locus_tag="RJ266_001176"
     CDS             complement(2085..2279)
                     /locus_tag="RJ266_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal transport/detoxification protein"
                     /protein_id="HDV7354916.1"
                     /translation="MKFKVKNVNCMNCVNLIKNSLEDEFGNIEVDLEQKILSLNLEEN
                     QVSNFTKEFQDLGFEIVERL"
     gene            complement(2269..3219)
                     /gene="czcD"
                     /locus_tag="RJ266_001177"
     CDS             complement(2269..3219)
                     /gene="czcD"
                     /locus_tag="RJ266_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family cation-efflux transporter CzcD"
                     /protein_id="HDV7354917.1"
                     /translation="MYKFLSHEPLANKSCHHNHEEHSHEHHHSHADARSVDKKILKIS
                     LLMTFSMMLVQFIYSILSNSLALLSDTLHMFSDVFALALSFLAIIAVEKWQDHQKTFG
                     YFRLEVLVAFINALTIILSALFIIYEAIEKFINPKEIDAKTMIIVAILGFLVNGINAL
                     MMFKGANLENVNMKSAFLHMMSDLLGSLAVIIGGIVVYFSGIVYIDTILAIVLSILLL
                     RWAIILLKQSANVLLESSPVDIEKVRQVLLLNPSVDEVVDLHITQITNKMLVASMHLK
                     VRVCNLKEFEKLSQDLSHKLLHEFEIGHITIQPIRSENEI"
     gene            complement(3295..3558)
                     /locus_tag="RJ266_001178"
     CDS             complement(3295..3558)
                     /locus_tag="RJ266_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HDV7354918.1"
                     /translation="MLCPVCNVDLVMSDRSGVEIDYCPKCRGVWLDRGELDKIIERSV
                     PNTANFNQAPRQESRYNDSAYHQHNDYYKKKKKESWLGELFDF"
     gene            complement(3628..4122)
                     /locus_tag="RJ266_001179"
     CDS             complement(3628..4122)
                     /locus_tag="RJ266_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HDV7354919.1"
                     /translation="MIEFILRDMFFAAVAGFGFAYACNPPLKTLILSALLAAIAHGLR
                     FTLVEYFHFQTLAIATFVASFCIGCLGIVLAKIIKTPAEIIAFPALIPMIPGIYAYKA
                     ILYLISFIRSDDLKAKSEFLVQFFDYFFTTVSVTLALAIGVSVTLLIFFEQSFMMTRH
                     AKKH"
     gene            complement(4119..4895)
                     /locus_tag="RJ266_001180"
     CDS             complement(4119..4895)
                     /locus_tag="RJ266_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HDV7354920.1"
                     /translation="MEKPDIQRLTNFLIVYTKTLLGAGTYTARVAKCVGRIAEVYGYE
                     ININFFFHHITLNVVDMDDNSIQRTYVIPNHHTHVNFKLIFDLSALSWAIYDHKYDLE
                     KAKVVFEQISQQKKHSYLFNLLFVSMANLAFCRLFGGDFGAGNLVFFATFVGLLLRYI
                     LTKAKIDLRIQYILCSFVSSWFVFFGLDMGYTNTSDVALGSSILYLIPGVFFINSVID
                     ILKDHILMGLSRIISVAILICCIALGIYMTLSISDFGILR"
     gene            4962..5888
                     /locus_tag="RJ266_001181"
     CDS             4962..5888
                     /locus_tag="RJ266_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HDV7354921.1"
                     /translation="MAKIGIVGLGYVGAASAYSIVTQGICSELYLYDIKQDLALAHAR
                     DLEDMSAIHFSYTKIFHALNLENLASCDIIILAFRKESLKELPSRLVELQNNILELKD
                     IVLTLKNANFKGKYIVATNPNDTITYYTQVLSQLPKNHVFGSGTNLDSSRLKKFLAKD
                     LNINSKDIFACMIGEHGDSQFAALSNASVLGQNLLDFYKQKLGKDLDIQELEKAVISE
                     GYFIYERKGRTEFGIGTSCANLAKAILEDRKSLHPVSVVFDDIAFSMPAIIGKDGIEK
                     VFELKFNEKEKTKLENSKQQIKNAIQSVKDKI"
     gene            complement(5885..6487)
                     /locus_tag="RJ266_001182"
     CDS             complement(5885..6487)
                     /locus_tag="RJ266_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDV7354922.1"
                     /translation="MQEIISFIVETASAWGYLGIIILMTLESCFIPFPSEVVMIPAGY
                     LAHKGELGITLCILSGTLGSVLGALINYYICFFWGKNFVLKWGKYFGINEAKFAKFEE
                     FFNKHGEFSTFTCRLLPGIRQYISMPAGLVKMRLINFILFTALGSAIWVAILVFLGYY
                     IGKNEELIKTYLTQILIIIIVFVILASLIYIKIKKPFKKA"
     gene            complement(6568..6795)
                     /locus_tag="RJ266_001183"
     CDS             complement(6568..6795)
                     /locus_tag="RJ266_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354923.1"
                     /translation="MRKILFASLLPIIALADCASLMAKYEAPEPESKTMKQVERWINK
                     KVSDPADAAVLKECMIARAADNPNQVSVAGK"
     gene            complement(6806..8254)
                     /locus_tag="RJ266_001184"
     CDS             complement(6806..8254)
                     /locus_tag="RJ266_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3373 family protein"
                     /protein_id="HDV7354924.1"
                     /translation="MKTKFSLILSACLLSSSLFAKNTDDEITKLQKQLAQIQAELAEI
                     RKEREAQAKQNEAVKAELADLNDRADETEFQAALSKVKFGLEFSTAVSNTHYKVSGQD
                     YSANNKWMNELHLNMNADINDKTKFYGRLSMAKNWSQMGWSGSPYDLDAGRNTRSSGP
                     VLYVDRAYLDYYITPEWITTIGRQPGTDGPGSNLRNNALRQSTYPALAINALGDAAVI
                     TYKPESLQDHKVAIRAAYGKTYQWDEEGKVRDWMSDQKDADANLYYAAVEGELPIEGM
                     GDNLILFNIAYLSDFALPLYNGPIGLPGNSVTTTILDDDGVVNLGDLTIANLHFENYK
                     AFGTNFNYFISLGYSHGNNNQLSSTLSGILQKQGYGNGKFNEKDGYAVHVGGRYDFTK
                     ALKVGYEFFWGSRYWYTMSRPSINDPLNIRMTRGTAHDFYVIYQLDRYQFLRLSYTNI
                     QNIWGNRGLPFGGAKKDKARADNIMLMYNVKF"
     gene            complement(8419..8901)
                     /locus_tag="RJ266_001185"
     CDS             complement(8419..8901)
                     /locus_tag="RJ266_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDV7354925.1"
                     /translation="MIKTIDTSKVNEYKFALIETEKGTMKLKLFGDEAPQTVCNFATL
                     ANEGFYKDLNFHRVIPNFVIQGGCPHGNGVGGPGYEIICECDDQEHKHERGTLSMAHA
                     GRDTGGSQFFICHSPQAHLDGVHTVFGQIDPKDEESLEVLDSIRQGDKILDIKICDKI
                     "
     gene            complement(8911..9618)
                     /locus_tag="RJ266_001186"
     CDS             complement(8911..9618)
                     /locus_tag="RJ266_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDV7354926.1"
                     /translation="MGRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGIDPDMN
                     PKLRSAIATAKANNMPKDNIDAAIKRASGKDSADIKNIHYEGKAAHGALVIVECMSDN
                     PTRTVANVKAIFSKNGGEVLQNGSLGFMFTRKAVFHLEKFAGDLEELELDLIDAGLEE
                     LEQNEEELVISGDYTAFGELSSAIETKGLVLKKAGLEYIPNNPVSFSEEQLSDIEKLL
                     DKLEDDDDVQAVYTNID"
     gene            9727..10068
                     /locus_tag="RJ266_001187"
     CDS             9727..10068
                     /locus_tag="RJ266_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDV7354927.1"
                     /translation="MNIAKKELFVAWFFLIAAIVFEVLGTSFLKMENQILGYIFMALF
                     IAFSYFFMGKAIKKIQVGIAYAVWELLGIILILLVSFIVFKESLTLTQILGIILSIVG
                     IIMINIGEVKE"
     gene            10068..10376
                     /locus_tag="RJ266_001188"
     CDS             10068..10376
                     /locus_tag="RJ266_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDV7354928.1"
                     /translation="MYIFIIVLSALLDIVANLLLKKSDGFKNKIWGLAAIVNAILAFF
                     LLSFSLKYVPLSIAYSTWGAIGIIGTCLGGWILYKEKLNKIGILGIIIVIIAVFLLNY
                     "
     gene            complement(10394..11986)
                     /locus_tag="RJ266_001189"
     CDS             complement(10394..11986)
                     /locus_tag="RJ266_001189"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HDV7354929.1"
                     /translation="MKSIIFNEIKKILECDFALENPKDKNLAHFATPLAFSLAKKLKK
                     SPMLIASDLASKFQNHDCFELVEAVNGYLNFRISKTFLNELANQALTNPNDFTKGEKK
                     QESFLLEYVSANPTGPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLL
                     GLSILLSVKENILHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSEENIPSLADWAK
                     DKMLVLIKQNLEQAKIKIDSYVSERSYYDALNATLESLKEHKGIYEQEGKIWLASSQK
                     GDEKDRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFL
                     GFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCD
                     THLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQSLNQDGVNL
                     LFEALNLKAILNDAFEARALQKIPDYLKNLAANFHKFYNENKVVGSANENDLLKLFSL
                     VALSIKTAFSLMGIEAKNKMEH"
     gene            complement(11998..12237)
                     /locus_tag="RJ266_001190"
     CDS             complement(11998..12237)
                     /locus_tag="RJ266_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HDV7354930.1"
                     /translation="MGGWSSPSHWLIILLIVVLLFGAKKIPELAKGLGKGIKTFKDEM
                     NNDDEVAKNTQKIEENKNTTNNTNADASIDETKKA"
     gene            complement(12239..12862)
                     /gene="gmk"
                     /locus_tag="RJ266_001191"
     CDS             complement(12239..12862)
                     /gene="gmk"
                     /locus_tag="RJ266_001191"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDV7354931.1"
                     /translation="MKLQGFVLLISGPSGAGKSTLLKKLFDEFEDELYFSISSTTRKP
                     REGEKNGIHYHFISHEEFQKGIDSDHFLEWARVHENFYGTSLKHTQDALDNGKIVVFD
                     IDVQGFKIARQKMADKIVSVFITTKNKDELKKRLIKRNTDTIIQLEKRLQNASDEMKE
                     LSEYDYLIINDELKQSYEALRAILIAHKFRTKGQNLGQIQNIWNEGE"
     gene            complement(12859..>13490)
                     /locus_tag="RJ266_001192"
     CDS             complement(12859..>13490)
                     /locus_tag="RJ266_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="highly acidic protein"
                     /protein_id="HDV7354932.1"
                     /translation="NKELQANISDFDDLPEVEEQEKEMDFDDLPEDAEFLGQAKYNEE
                     SEENLEEFAPVVEEDVQDEIDDFTSNLSTQDQIKEELAQLDELDYGIDSDNSSKVLED
                     FKDEPILDDKELGTNEEEVVVPNLNISDFDALKESDIQEALGEEILEKNEEPIVSDAT
                     KDDNSEEIVNELSQSIAGAITSSIKDDTLKAALKGMNMNININISFKED"
BASE COUNT         4606 a         2481 c         1740 g         4663 t
ORIGIN      
        1 tcttaaagaa ttaagcacta cagtaataga actaaaacac attgcaagtg ctgctatatg
       61 aggacttaaa gagataaaag atataaatcc tgccgcgata ggaatgcaaa gcacattata
      121 aataaaagcc caaaaaagat ttagcttaat aataccgcgt gtttttttag caagtttaaa
      181 acatttaaaa atcgctgata aatcatcttt tatcaagata aaatctcctg tttttttagc
      241 aagttcattt gcctttgaaa aactcatact cacacttgca acagataaag ccgccgcatc
      301 attgatccca tctcctacaa aaagagtttt tttaaatttt tgaatgattt gtagtttttc
      361 ttcactctta agctgagcgt gaaattcgtc tatttgtaat tctttggcta ttttttctac
      421 attttttaca tgatcgccgc ttaaaataaa agttttaaga ttttgctttt ttaaatttaa
      481 cacaagctct ttggctccat cttttaaagc attgcttaac aaaacaccgc ctaaacactt
      541 tttattctta gcaaaataca ccctaatata ttctttaaaa gtatcaaaaa agatatcact
      601 ttcttttgtg tcaatttcat tttcgtgcaa aaacttcgca ctacctgcga gataaatatc
      661 attatcttct ttgtatttta taccagaacc cacaatcact cttccctcac cctttaaatc
      721 aaaaaaatga tctttatgta aagccttagc tataggatga gagcttaaac tttcaatttg
      781 acataattta tcaaaatcat ctttagaaag attgtgttta aaaatactca aattttcctt
      841 tgttaatgta cccgttttat caaaaaaagc atacttaact aaggctaatt tttctaaagc
      901 agcaggattt ttaataagaa tgaaattttt tgccgcattt gcacttgcca caaccaaagc
      961 tataggcgtt gcaagaccta aagcacaagg acaagagatc aaaagcacag cacaagagtg
     1021 taaaaaagct gtatttaaat ctgcttttag cacccaaaaa acaaaaacta aaaaagcaaa
     1081 aaatattata ccccctacaa agtatttaga aatttgatct gctaaatttg ccaaaggact
     1141 tttgatactt cctgcttcaa aaactagatt tttgatttgt tctaaagtac tatccatggc
     1201 ctttttgttt gctttgatcc ttaaagcacc atttaaaact actgctcctg cttgaacttc
     1261 atcgccttct ttttttaaaa caggcaaaaa ctccccattt aaaaaactca tatcaagctc
     1321 tgcactccct aaaagcacta ctccatctgc aacaatgctt tctccttctt ttaccaaaag
     1381 tacatcgcca cttttgacaa aagaacttga aatttctttg atactttcat cttcaagcaa
     1441 aatttttgtc ttttttgtgt ctatattttc taaaattctt tgataatctt gtgccttaaa
     1501 tttagcctta ctttcaagat attttcctaa aagcacaaag gaaataatca tcattgcacc
     1561 actaaaatac aaatcttctt ctttgaaaat ttgcaaatac accaaaaaag aatacacaaa
     1621 agcactcaaa gtccccaaag ctacaagggt attcatatct aaatttttgc ttttaaagcc
     1681 taaaaaagca tgagaaaaaa agtctctccc acaataaaat atcccaaaaa aactcaaagc
     1741 catttggata ttttgagaaa aagaactttt aacaaacatt tcaaaataca taataatcac
     1801 actcaaaact atacttaaga gcaaattttt tcttaattct aagtgttttt ttgccttgta
     1861 tgcgttcaag ctttgttcat cttctaaaat ttcaaagcct aaattttgaa tttttgcgat
     1921 gatatccttg cgtttttctt gatcttcaag taaaaaaacc ccgctagaat tcacataaga
     1981 aacactagca tctttaacac catcaatttt tttacaagct ctttctatag cattagaaca
     2041 attaacgcaa gtcattttgc ctatttttat acgcaattct tccattataa acgctctacg
     2101 atctcaaaac ctaaatcttg aaattctttt gtaaaatttg atacttgatt ttcttctaaa
     2161 tttaaactta aaattttttg ctccaaatcc acttctatat ttccaaattc atcttcaaga
     2221 gaatttttga tcaaatttac acaattcatg caattaacat tttttacttt aaatttcatt
     2281 ttcactcctt ataggttgta tggtaatatg cccgatttca aattcatgca acaacttatg
     2341 agataaatcc tgagatagtt tttcaaattc ctttagattg caaactctta cttttaaatg
     2401 catagaggct actagcattt tattagtgat ttgagtaata tgcaaatcca ctacctcatc
     2461 cacactagga tttaaaagca aaacttgtct tactttttct atatccacag gagaactttc
     2521 aagcaagaca ttagcgcttt gtttaagcaa gataatcgcc catcttaaaa gcaagattga
     2581 taatacaata gctaaaatcg tatctatata aacaataccg ctaaaataca ccacgatccc
     2641 acctataata accgctaaag aacccaataa atcgctcatc atatgcaaaa aagcggactt
     2701 catattgaca ttttctaaat ttgcaccctt aaacatcatc aaagcattaa tcccatttac
     2761 caaaaagccc aaaatagcta caattatcat ggttttagcg tcaatttctt ttggattgat
     2821 aaatttttct atagcctcat aaatgataaa taaagccgat aaaataatgg ttaaagcatt
     2881 gataaaagcc actaaaactt caagacgaaa atacccaaag gtcttttgat gatcttgcca
     2941 tttttctaca gctataatgg ctaaaaaact aagagctaag gcaaaaacat cagaaaacat
     3001 atgcaaagta tcgcttaaaa gtgccaaaga atttgaaagg attgaataaa taaattgcac
     3061 aagcatcata gaaaaagtca ttaaaagaga aatttttaaa atctttttat ccacactcct
     3121 tgcatcggca tgggaatgat gatgttcatg agaatgttct tcgtgattat gatgacaaga
     3181 tttgttagct aaaggctcgt gtgataaaaa tttatacatc ttatatcctt ttttgcttga
     3241 cattttaaga tattaagcta aaaaggatat aaatatttgt tatttttata aaaattaaaa
     3301 gtcaaaaagc tcgcctagcc aactttcttt ctttttcttt ttataatagt cattgtgctg
     3361 atgataagct gagtcattat atcttgactc ttgtcttgga gcttggttaa aatttgctgt
     3421 attagggaca ctgcgttcta tgattttgtc aagctctcca cgatcaagcc aaacgccacg
     3481 acactttgga caataatcaa tctcaactcc actcctatca ctcataacca aatctacatt
     3541 acaaactgga cataacatac aatacctttt tttaaatttt tgacttaaaa ttataaaaag
     3601 aaatattaaa caaatttaca acaagtttta atgttttttt gcatgtctag tcatcataaa
     3661 actttgttca aaaaatataa gcaaggtaac actcactcct atagctagag ccaaagtcac
     3721 agaaacagtt gtaaaaaaat aatcaaaaaa ttgaactaaa aattcagact tagccttcaa
     3781 atcatcactg cgtataaaag aaataagata caaaatcgct ttataagcat aaattccagg
     3841 tatcatagga ataagagcag ggaaagcgat aatttcagca ggagttttga tgatttttgc
     3901 taaaacaatt cctaaacatc ctatgcaaaa tgaagcaaca aaagttgcaa ttgctaaagt
     3961 ttgaaaatga aaatattcca ccaaggtaaa acgaagtcca tgtgcaattg ccgctaaaag
     4021 agcagataaa ataagggttt ttaaaggtgg attacaagca taagcaaagc caaatcccgc
     4081 cacagcagca aaaaacatat ctcttaaaat aaattcaatc atcttaaaat cccaaaatcc
     4141 gaaatactaa gcgtcatgta aattccaagt gctatacaac aaatcaaaat agccacgctg
     4201 ataatacggc taagccccat taaaatatga tcttttaata tatcaatcac agaatttata
     4261 aaaaataccc ctggtataag atacaagata ctagaaccca aagccacatc agaagtattg
     4321 gtatatccca tatccagtcc aaaaaataca aaccacgatg agacaaaaga acaaaggatg
     4381 tattgaattc ttaaatcaat ctttgcttta gttaaaatat atcttaataa caatcccaca
     4441 aaagttgcaa aaaacaccaa atttccagca ccaaaatcac caccaaaaag cctacaaaaa
     4501 gctaaatttg ccatagaaac aaataaaaga ttaaacaaat aagaatgctt tttttgttga
     4561 gaaatttgct caaaaacgac ttttgctttt tcaagatcgt atttgtgatc atatatagcc
     4621 cagcttaaag cacttaaatc aaaaataagt ttaaaattaa catgggtatg atgattgggt
     4681 ataacataag ttctttgaat ggagttatca tccatatcta caacatttaa agtaatatga
     4741 tgaaaaaaga aattgatatt tatctcatag ccataaacct cagctattct tcctacgcat
     4801 tttgccaccc tagctgtata agttccagca cctagcaaag ttttagtata tacgattaaa
     4861 aaattagtta atctttgtat atcaggtttt tccatatttt aataatcttt gattgaattt
     4921 gttataatta tagcaaattt taaaataaat aaggagaaaa aatggcaaaa atcggtatag
     4981 ttggtttagg ttatgtagga gctgctagtg cttatagtat agttactcaa ggaatttgtt
     5041 cagaacttta cttatatgat ataaaacaag atttagctct agctcatgca agagatttgg
     5101 aagatatgtc agccattcat ttttcttata caaaaatttt tcatgcacta aatttagaaa
     5161 atttagcttc ttgcgatatt atcattttag cttttagaaa agaaagctta aaagaattac
     5221 ctagtcgctt agtagaactt caaaacaata tcctcgaact taaagacatt gtcttaacct
     5281 taaaaaatgc taattttaaa ggcaaataca tcgtcgcaac aaatccaaat gacaccataa
     5341 cttactacac tcaagtatta agccaattac ctaaaaatca tgtttttggt agtggaacaa
     5401 atttagatag ttcaagactt aagaaatttt tagccaaaga tttaaacata aattcaaaag
     5461 atatttttgc ttgtatgatt ggtgaacatg gagattctca gtttgcagca ctttctaatg
     5521 caagcgtttt aggacaaaat ttattagatt tttataagca aaaattaggc aaagatttag
     5581 acatacaaga actcgaaaaa gccgtgatta gcgagggata tttcatctat gaacgcaaag
     5641 gaagaacaga atttggcata ggaacttctt gtgcaaattt agccaaagcc atcctagaag
     5701 atagaaaaag tttacatcct gtaagtgtgg tttttgatga tatagctttt tcaatgcccg
     5761 ctatcatagg aaaagatggt atagaaaagg tttttgaatt aaaattcaat gaaaaagaaa
     5821 aaacaaaatt agaaaattca aaacaacaaa tcaaaaacgc catacaaagc gtaaaagata
     5881 aaatttaagc ctttttaaaa ggctttttga ttttgatata aattaaactt gctaaaatca
     5941 caaaaacaat tataataatt aaaatttgag ttaaataagt tttaatcaac tcttcatttt
     6001 ttcctatata ataacctaaa aatacaagta tagccaccca aatagcacta ccaagcgcag
     6061 taaaaagtat aaaatttata agtctcattt ttaccaaacc tgcaggcata gaaatatact
     6121 gacgaattcc tggtaaaaga cgacaagtaa aggttgaaaa ttccccgtgt ttgttaaaaa
     6181 attcttcaaa tttagcaaat ttggcttcgt ttatgccaaa atacttaccc cattttaata
     6241 caaaattttt accccaaaaa aagcaaatat agtaattaat caaagcccct aaaacagaac
     6301 ctaaagtccc actaagtata caaagagtga taccaagttc gcctttatgt gccaaatatc
     6361 cagcaggtat cataacaact tcacttggaa aaggtataaa acaactctct aaggtcatta
     6421 agataataat acccaaatac ccccaagcac tagccgtctc aacaataaaa gaaatgattt
     6481 cttgcatatt agccttattt gaagaaaatt ttaaaaaatt gtagcttaaa agattaaaca
     6541 gtaaaaagcg gttttatacc gcttttttta tttacctgca actgaaactt gatttggatt
     6601 gtccgctgca cgagcgatca tacactcttt taaaacagca gcatcagctg gatcgctaac
     6661 ttttttatta atccagcgtt caacttgttt cattgttttt gactctggct ctggagcttc
     6721 gtattttgcc atcaaacttg cacaatcagc caaagcaatg ataggtaata aacttgcaaa
     6781 aagtattttt ctcatctttt gctccttaga attttacatt atacattaac atgatattat
     6841 cagctcttgc tttatctttt ttcgctccac caaatggtaa accacgatta ccccaaatgt
     6901 tttggatatt agtataactt aagcgtaaga attgatatct atcaagttga taaatcacat
     6961 aaaaatcatg cgccgttcct cttgtcattc ttatattaag cggatcgttg atacttggac
     7021 ggctcatagt ataccaatat ctacttcccc agaagaactc ataccctact tttaaagcct
     7081 tagtaaaatc atagcgtccg cctacatgca cagcataacc gtctttttca ttaaatttac
     7141 cattaccata accttgcttt tgaagaattc cacttaatgt agagcttaat tgattgttgt
     7201 tcccgtgaga ataacctaaa gatataaaat aattaaaatt cgttccaaaa gctttgtaat
     7261 tttcaaaatg aagatttgct atagttaaat ctcctaaatt taccacccca tcatcatcaa
     7321 gaatagtagt agtaacacta ttaccaggta aaccaattgg accattgtaa agtggtaaag
     7381 caaaatcact taaatatgca atattaaata atattaaatt atctcccata ccttctatag
     7441 gaagctctcc ttctactgca gcatagtaaa gatttgcgtc agcatctttt tgatcgctca
     7501 tccagtctct taccttgcct tcttcatccc attgataagt tttaccataa gctgcacgga
     7561 tagctacctt atgatcttgc aaactttcag gcttataagt gatcactgct gcatcaccta
     7621 gagcgttgat tgctaaggct ggataagttg attgtcttaa agcattgttt ctaagattac
     7681 ttcctggacc atcggttcct ggctgtcttc ctatggttgt aatccactca ggtgtgatat
     7741 agtagtcaag ataagctcta tctacataaa gcacaggccc acttgatctt gtgtttcttc
     7801 ctgcatctaa gtcataaggg cttccactcc aacccatttg agaccagttt ttagccatag
     7861 ataaacgacc atagaatttg gttttatcat taatatcagc attcatattt aaatgaagct
     7921 cattcatcca tttgttgtta gcactataat cttgtccact gactttatag tgtgtatttg
     7981 aaactgctgt tgaaaactca agtccaaatt taaccttgct taaagcagct tgaaattctg
     8041 tttcatcggc cctatcatta agatcagcaa gttcagcttt tacagcttca ttttgcttag
     8101 cttgagcttc cctttctttt ctgatttctg caagttcagc ttgaatttgt gcaagctgtt
     8161 tttgaagctt ggttatctca tcatctgtat ttttagcaaa aagtgaagat gaaagaagac
     8221 aagcacttaa aataagtgaa aacttagttt tcataatcat aactccttgt aattttgtta
     8281 catttagtaa attaaaattg tgattataga aaaaaaagtt ttaaaaaaaa attatacatt
     8341 aatcattttt agctagtcaa acttatgact agctttgtaa atattgtagt tttaaaaaag
     8401 ttttaaaatt ttaaattttt aaattttatc gcaaattttt atgtctaaaa ttttatctcc
     8461 ttggcgtata gagtctaaaa cttctaaact ttcttcatct tttggatcaa tttgcccaaa
     8521 aacagtatga accccatcta aatgagcttg agggctgtga caaatgaaaa attgagaacc
     8581 acccgtatcg cgtcctgcgt gtgccataga taaggttcca cgctcatgtt tatgctcttg
     8641 atcatcacat tcgcaaatga tttcatatcc aggcccacct acaccattgc cgtgtggaca
     8701 acctccttgt atgacaaaat ttgggatcac acgatgaaaa tttaaatctt tataaaatcc
     8761 ctcattagcc aaagtagcaa aattacaaac cgtttgcgga gcctcatcgc caaaaagttt
     8821 taatttcatt gtgccttttt cagtttctat aagagcaaat ttgtattcat ttactttgct
     8881 tgtgtcgatt gtttttatca ttatttctcc ttaatctata tttgtataaa cagcttgaac
     8941 atcatcatca tcttctaact tatctaaaag tttttctata tcgctaagct gttcttcgct
     9001 aaagcttaca ggattgtttg gtatatactc aagtcctgct tttttaagaa ctaaaccctt
     9061 agtctctata gcagaactta gctcaccaaa ggcagtataa tcaccgctaa ttactaactc
     9121 ttcttcattt tgttctaatt cttcaagccc tgcatcgatc aaatcaagct ctaattcttc
     9181 taaatctcct gcaaattttt caagatgaaa aaccgctttt ctagtaaaca taaagcctaa
     9241 agatccattt tgtaaaactt ctccaccatt tttgctaaaa atggctttaa cattagccac
     9301 ggtgcgcgta gggttatcgc tcatacattc aactataacc aaagctccat gtgcagcttt
     9361 tccttcataa tgaatgtttt taatatctgc gctatctttt ccactcgcac gcttaatagc
     9421 cgcatctata ttatcttttg gcatattatt tgcttttgct gtggctatag cacttcttaa
     9481 ttttggattc atatcaggat caatgccacc ttctttagca gctacttgta tggctttagc
     9541 aagcttagga aaaagcttac tcattttatc ccatctagcc tctttagaag ctcttcggta
     9601 ttcaaacgct cgtcccataa attctcactt tctttaaaga tttttaaact taaaagtata
     9661 aactaaaaag gctaattaaa gctttaaatg gtatgatttt accatttatt tttagggaga
     9721 agctttttga atatcgcaaa aaaagaactt tttgttgctt ggtttttctt gattgctgct
     9781 attgtatttg aagttttagg cactagtttt ttaaaaatgg aaaatcaaat tttaggctat
     9841 atatttatgg ctttatttat agctttttct tattttttta tgggcaaggc gattaaaaaa
     9901 attcaagtag gcatagccta tgctgtatgg gaacttttag ggattattct tatactttta
     9961 gtttctttta tagtttttaa agagagttta accttaactc aaattctagg cattattctt
    10021 tctatcgttg gaattatcat gattaatata ggcgaggtta aagaataatg tatattttta
    10081 ttattgttct atcggcattg ttagatatcg tagcaaattt attgctaaaa aaatcagatg
    10141 gttttaagaa taaaatttgg ggcttagctg cgattgtcaa tgctatactt gctttttttc
    10201 tactttcttt ttctttaaaa tatgttcctt taagcatagc ttactcaact tggggtgcta
    10261 taggcatcat aggaacttgt cttggtggat ggattttata taaagaaaaa ttaaacaaaa
    10321 taggaatttt aggtatcatt atcgtgataa tagcagtatt tttgctaaat tattaaaaca
    10381 gcaaaatgct gttttaatgt tccattttgt tttttgcttc aatacccatt aaagaaaatg
    10441 cggttttaat actaagagca accaaagaaa ataatttaag taaatcattt tcatttgcag
    10501 agcctacaac tttattttca ttgtagaatt tatgaaaatt tgcagctaaa tttttaagat
    10561 aatcaggaat tttttgcaaa gctctagcct caaaagcatc atttaaaata gcctttaaat
    10621 tcaaagcttc aaagagtaaa tttacaccat cttgatttaa actttgtaaa tcagctttca
    10681 ttacatcatc gattttttta ccagctttag caaacacttg atgaattcta gcgtgtgcat
    10741 agttgatata gtatacagga ttagagctat cttctttttg caaatcacta atatcaaatt
    10801 ccaaatgagt atcgcatttt ttactcaaaa agatataacg caaagcatca cttcctatct
    10861 catcaaccac atcgctcatc aagataaaat ttcctgctct tttactcatt ttataaggtt
    10921 ctccatcttt aagcagggaa accatttgtg ctaaaataat ctcaagatta ttagagtcaa
    10981 atcccaaaaa ttccatcgca gctttcattc tagggatata accatgatga tctgctcccc
    11041 aaatattaat acactttcca taaccacgac tcattttatc tttatgataa acaatatctg
    11101 ctgccaaata agtcccgcgt ccatcttcac ggataattac cctatctttt tcatcgcctt
    11161 tttgcgaaga agcaagccaa attttacctt cttgctcgta aattccttta tgctctttta
    11221 aagattctaa agttgcattt aaagcatcat aatacgatct ttcgcttaca tagctgtcaa
    11281 ttttaatctt tgcttgttct aaattttgtt taatcaaaac aagcatttta tcttttgccc
    11341 aatcagccaa actagggata ttttcttcgc taaaaaattc tttaccaaat ttttcaaaag
    11401 cttcttttgc caaatccgct atatactcgc ctttgtaata ttgctctgga tattcaacat
    11461 tttcatgaag tatattttct ttcacactta gtaaaataga aagccctagt aaataaattt
    11521 gattacccgc atcattgaca tagtattctg tatcgaattt atagcccaaa tgtcttgcaa
    11581 gtcttgttaa ggtgtctcca aaaacagcgc ctcttgcatg tcctatgtgt aaaggcccag
    11641 taggatttgc actcacatat tcaagcaaaa aactttcttg ttttttttct cctttagtaa
    11701 aatcatttgg atttgttaaa gcctgatttg caagttcatt taaaaaagtt ttggaaattc
    11761 taaaatttaa atacccattt acagcttcaa ctaattcaaa acaatcatga ttttgaaatt
    11821 tgctcgctaa gtcactagcg atcaacatag gggatttttt taatttctta gccagtgaaa
    11881 aagccaaagg ggtagcaaaa tgtgctaaat ttttatcctt tggattttca agtgcaaaat
    11941 cacactctaa aatcttttta atttcattaa aaataatact tttcaaaaga ctaaacctta
    12001 agcttttttt gtttcgtcta tacttgcatc agcatttgta ttattagttg tgtttttatt
    12061 ttcttctatt ttttgagtat tttttgctac ttcatcatca ttattcattt catctttaaa
    12121 agttttaata cctttgccta aaccctttgc aagttctgga attttttttg ctccaaaaag
    12181 caatacaaca atcaataaaa taatcaacca atgacttgga cttgaccaac cacccatttt
    12241 attctccttc attccaaata ttttgaattt gccctagatt ctgccctttg gttctaaatt
    12301 tatgggcgat taaaatcgct cgcaatgctt cataactttg cttcaactca tcattaatga
    12361 taagataatc atactcgcta agctctttca tttcatcact agcgttttgt aatctttttt
    12421 ctagttgtat tattgtatca gtatttcgct taataagtct tttttttagc tcatctttat
    12481 tttttgtagt aataaaaaca gaaacaatct tatcagccat tttttgtctg gctattttaa
    12541 atccttgcac atcaatatca aaaacaacta tttttccatt atctaaagca tcttgagtgt
    12601 gctttaaaga agtgccataa aaattttcat gcactctagc ccattctaaa aaatgatcac
    12661 tatctatacc tttttgaaat tcttcatggg atataaaatg ataatgtatt ccattttttt
    12721 caccctctct tggtttgcga gttgttgaag aaatagaaaa ataaagctca tcttcaaatt
    12781 catcaaaaag tttttttaaa agagttgatt ttccagcacc actaggacct gaaatcaaca
    12841 aaacaaaacc ttgcaatttc aatcctcttt aaaactaatg tttatattta tattcatatt
    12901 cataccctta agagcagctt ttaaggtatc atctttaata cttgaagtga tcgctcctgc
    12961 tatgctttgg ctaagctcat taactatctc ttcgctatta tcatctttag ttgcatcact
    13021 tactataggc tcttcatttt tttctaagat ttcctctcca agagcttctt gtatatcact
    13081 ttctttcaat gcatcaaaat cacttatatt taaatttggc acaaccactt cctcttcatt
    13141 tgttcctaat tctttatcgt ctaaaattgg ttcatcttta aaatcttcta aaaccttgct
    13201 actattgtca ctatcaatac cataatccag ctcatcaagt tgagctagtt cttctttgat
    13261 ttgatcttga gtgctcaaat ttgaagtaaa atcatctatt tcatcttgaa catcttcttc
    13321 cacaacagga gcaaattcct ctaaattttc ctctgattct tcattatatt ttgcttgacc
    13381 taaaaattca gcatcctcag gaagatcatc aaaatccatt tctttttctt gctcttcaac
    13441 ctcaggaaga tcatcaaaat cgcttatatt agcttgtaat tctttattat
//
LOCUS       DAPIWB010000047        12643 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.048, whole genome shotgun sequence.
ACCESSION   DAPIWB010000047 DAPIWB010000000
VERSION     DAPIWB010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12643
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.048"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..784)
                     /gene="purU"
                     /locus_tag="RJ266_001193"
     CDS             complement(<1..784)
                     /gene="purU"
                     /locus_tag="RJ266_001193"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HDV7354933.1"
                     /translation="MISVLKICTKDQKGLIYRISDVIFKYHINIVKNDEFVGEGMFFF
                     RALLEGEFDKEAFIGTLEAMLGQEALIELCEKRKKDIVVFATKESHCLGDLLIKHYSN
                     ELEANIKAVISNHNSLKDLVEKFEIPYHFISAENLDRKEQENQILKCLEQYKFDYLVL
                     AKYMRILSPDFVRHFEGKIINIHHSFLPAFIGANPYKQAFERGVKIIGATAHFVNNNL
                     DEGPIITQAVLPVNHEFTWQDMQQAGRNIEKDVLSKALDLAFE"
     gene            complement(781..1899)
                     /locus_tag="RJ266_001194"
     CDS             complement(781..1899)
                     /locus_tag="RJ266_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HDV7354934.1"
                     /translation="MQISKISLKNNPDLQFIAEFLKPYTKRAYLVGGSVRDLFLGLKI
                     CDYDIELYDIKPKDFEKIMQKLGAQGFGKSFFVYKFKNYDLALARTENKISYGHKGFE
                     VQICNDEKLGAKRRDFTINSMMINLFNDEFLDFYGGLKDLGAGFLRHIDKQSFQEDSL
                     RVLRAVVFASRFNFKITSESLKLMQSMDITDLSKDRINAELYKFFKSPRLDVGYRYLQ
                     ELGLEKQVFGFESVFKSLEFQNLLRQSREFVKSDALFLYLYLNFFNLEKDIFFKRTKL
                     KKEYLKYANQAFYLDDISDFELAKIAFEMPLKEWLGLWSKKRIEQAKRLGLYENKFES
                     KILAKDFINAGFCGKILGLKLQEARENELKEYIKGLAK"
     gene            complement(1868..2359)
                     /locus_tag="RJ266_001195"
     CDS             complement(1868..2359)
                     /locus_tag="RJ266_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate:acceptor oxidoreductase"
                     /protein_id="HDV7354935.1"
                     /translation="MNLEDLAKKTISEVSSIMEEQRRQNEILKEQELNRKTEIKDELP
                     PMEFVCEELDTPQDLEDKISMAKFEEEQKIQNNIEISTQENKEFKKEEPFLQSEILNP
                     SVMTEVQTLNEDIFLKHLRERILVLFEGLNSIKKDDLENRLNLTINFLEFLLANIEDK
                     LKK"
     gene            complement(2356..2604)
                     /locus_tag="RJ266_001196"
     CDS             complement(2356..2604)
                     /locus_tag="RJ266_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDV7354936.1"
                     /translation="MMKNTVTEASIYEAQGLKDEALEIYKNILKEDPDNQNAIDAVRR
                     LSGFRSKHKDLNTQMLDFFINMKSDEEINEFKRWLIKI"
     gene            complement(2683..2856)
                     /gene="tatA2"
                     /locus_tag="RJ266_001197"
     CDS             complement(2683..2856)
                     /gene="tatA2"
                     /locus_tag="RJ266_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA2"
                     /protein_id="HDV7354937.1"
                     /translation="MVFLIPLLIIIGVIFGIDYVYFKNQDLKAQVKKEQKELNSSLEK
                     EKKEYIEKLFKTK"
     gene            complement(2866..3204)
                     /locus_tag="RJ266_001198"
     CDS             complement(2866..3204)
                     /locus_tag="RJ266_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HDV7354938.1"
                     /translation="MNNLSSVLILAKEEYINDLKKAISEIPFCSVELCENEKIIVVIE
                     SENLEDELNSYKMLEKLPNIISINMVFSYQDLNDDIQKAINSGAIETIEKNENAENVR
                     YYGSVFNQFS"
     gene            complement(3197..4111)
                     /locus_tag="RJ266_001199"
     CDS             complement(3197..4111)
                     /locus_tag="RJ266_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HDV7354939.1"
                     /translation="MKKFLFILSLFCVLSYAYELKLNANITALKLDKQNLYIGTDKGE
                     ILQYNIKDKSLKELLSLPKIKNYYGDNFAKIYNIDIFKHTLLILSEGDFGAKNLSFYK
                     ENLQIKKLEENSIIKAFFINENTYLLISIGSEIELIDKSLKNIKKFNFSHSSLNDAVL
                     NEDKSRLIAGFESGEVELFDLKNWKMLKNYDKMHKDNIYQVDFKNNVILSCGTDRRIG
                     VVKNEEQNFLQKDFLIYTCALSPSGEFAVYSDNEAGVSEVFSTSDFKPVKTFNNENLM
                     SEFIIFLNNKDFIVSGFGDSIMFRSIDE"
     gene            complement(4116..4640)
                     /locus_tag="RJ266_001200"
     CDS             complement(4116..4640)
                     /locus_tag="RJ266_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HDV7354940.1"
                     /translation="MMKKKLVLLGSAAVVFFAACAMNSGVSSEQIGLRKASLENENKV
                     NLVEANFTTLQPGESTRFERSYENAPPLIPHAIEDLLPITKDNNMCLSCHDKAIAADA
                     GATPLPASHYYDFRHNKTTGDVISDSRFNCTQCHVPQSDAKPLVRNSFKPEFKNEQLK
                     SRSNLIDVINEGVK"
     gene            complement(4637..5419)
                     /gene="napH"
                     /locus_tag="RJ266_001201"
     CDS             complement(4637..5419)
                     /gene="napH"
                     /locus_tag="RJ266_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HDV7354941.1"
                     /translation="MMKYLIARRIVQLGILALFSFKATDFILQGNLSSSRLFNTIPLS
                     DPFAVLQIILASWSIDLVALIGALIIFFIYGLFLGRVFCSWVCPVNLITDFAAFVRNK
                     LTLNNKFLILPKNLRYFVLVLVLVLSFVFSLPVFESFSYIGMIHRGIIFATSSWIFVA
                     FILFCIDTFLSPRAICSHFCPLGAFYAFISRFALLKIKHDSDKCTKCYECIRICPEKQ
                     VLWMVGKESTSVKSGECIRCARCIEVCNDDALNFNIFDLRNK"
     gene            complement(5416..6156)
                     /gene="napG"
                     /locus_tag="RJ266_001202"
     CDS             complement(5416..6156)
                     /gene="napG"
                     /locus_tag="RJ266_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HDV7354942.1"
                     /translation="MKGRREFFVSAFKAACLCTGGGFLANLALKADDNYALRPPGAED
                     EARFLSKCIRCGLCVKACPYDTLKLASLLDSPKNGTPFFKAREIPCYLCKDIPCIREC
                     PTDALDKKHLEQGIESLKMGIAIVDSASCVAHWGIQCDACYRACPLIDRALKLELKRN
                     ERTAKHAFLLPSVDHEVCVGCGLCELACITERPAIRVLPREYVLGKAGSHYVKGWDEK
                     DEGRIKNADTSKHFDAKKATNYLNDGEL"
     gene            complement(6174..8948)
                     /gene="napA"
                     /locus_tag="RJ266_001203"
     CDS             complement(6174..8948)
                     /gene="napA"
                     /locus_tag="RJ266_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic nitrate reductase subunit alpha"
                     /protein_id="HDV7354943.1"
                     /translation="MNRRDFIKNTAIASAASVAGLSVPSSMLGAQEEDWKWDKAVCRF
                     CGTGCGIMIARKDGKIVATKGDPAAPVNRGLNCIKGYFNAKIMYGEDRLVMPLLRMNE
                     KGEFDKKGKFQQVSWQRAFDEMEKQFKKAYNELGVTGIGIFGSGQYTIQEGYAALKLA
                     KAGFRTNNIDPNARHCMASAVVGFMQTFGVDEPSGCYDDIELTDTIITWGANMAEMHP
                     ILWSRVSDRKLSNLDKVKVVNLSTFSNRTSNIADIEIIFKPNTDLAIWNYIAREIVYN
                     HPEAMDMKFIKDHCVFATGYADIGYGMRNNPNHPKFKESEKDTVEKENVITLDDEEAT
                     SLSYLGVKAGDKFEMKHQGVADKNWEISFDEFKKGLAPYTLEYTARVAKGDDNESLED
                     FKKKLQELANLYIEKNRKVVSFWTMGFNQHTRGSWVNEQAYMVHFLLGKQAKPGSGAF
                     SLTGQPSACGTAREVGTFSHRLPADMVVANPKHREISEKIWKVPAKTINPKPGSPYLN
                     IMRDLEDGKIKFAWVQVNNPWQNTANANHWIAAAREMDNFIVVSDCYPGISAKVADLI
                     LPSAMIYEKWGAYGNAERRTQHWKQQVLPVGAAMSDTWQILEFAKRFKLKEVWKEQKV
                     DNKLTLPSVLEEAKAMGYSEDDTLFDVLFANKEAKSFNPNDAIAKGFDNTDVKGDERK
                     IQGSDGKEFTGYGFFVQKYLWEEYRKFGLGHGHDLADFDTYHKVRGLRWPVVNGKETQ
                     WRFNTKFDYYAKKAAPNSDFAFYGDFNKMLTNGDLIAPKDEKEHSIKNKAKIFFRPFM
                     KAPERPSKEYPFWLATGRVLEHWHSGTMTMRVPELYRAVPEALCYMSEKDGEKLGLNQ
                     GDLVWVESRRGKVKARVDMRGRNKPPVGLVYVPWFDENVYINKVTLDATCPLSKQTDF
                     KKCAVKIYKA"
     gene            complement(9195..9722)
                     /gene="tpx"
                     /locus_tag="RJ266_001204"
     CDS             complement(9195..9722)
                     /gene="tpx"
                     /locus_tag="RJ266_001204"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HDV7354944.1"
                     /translation="MSTVNFKGNPVKLKGNSVEVGADAPKVNLKAKDLSVIEIGAAGK
                     TQIILSVPSLDTPVCATEAREFNKKVASYNGAEVIVVSMDLPFAMGRFCSTEGIENLS
                     VASDFVAKEFGEKYGVLINEGALEGLLARAVFVIKEGKVAYKELVNEITEMPDIAKLD
                     AFFGGSSCCGGCGCH"
     gene            complement(9821..10561)
                     /gene="peb2"
                     /locus_tag="RJ266_001205"
     CDS             complement(9821..10561)
                     /gene="peb2"
                     /locus_tag="RJ266_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AcfC family adhesin PEB2"
                     /protein_id="HDV7354945.1"
                     /translation="MKKILILSLAAASFLNAEILVYGPGGPAPVLKELALKFEEKTKE
                     KVIVTAGPTPAWIDKAKENADLIFSGNTSMMDDFAKKIPSLSLENLSVLNVRPSGIIV
                     RPNNPKNIKNFEDILKDDINVMVVDGAGQVGLYEDMALKSAKRENLVKLRKNIKIYAK
                     NSKAAVDEWNNNPNIDALIIWSHWAKALGDDKALFIKDKNAVIYRAAEIAPTKKGLEN
                     KKALEFVDFIKSKEAQKVWKKYTWKEVK"
     gene            complement(10602..12632)
                     /locus_tag="RJ266_001206"
     CDS             complement(10602..12632)
                     /locus_tag="RJ266_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HDV7354946.1"
                     /translation="MPLSKLNNEQYLAATADFGHNLVIASAGTGKTSTIVARISYLLS
                     KGVAPQKIMLLTFTNKASKEMIGRLGKFFDKNITSKILAGTFHSTAYTLLRNADKNIA
                     LKQASELKTLLKSVYEKRTFRHLSDIKPYQSSYLYDLYSLFQNKAHNQDFYTWFCQNY
                     EDQSIYAEIYEDILKEYDNEKKRFNYVDFNDLLINLKDLLKEEKYEFDEILVDEYQDT
                     NTLQSSLIEAFHSKSLFCVGDYDQSIYAFNGADINIIGGFKDRFKDAKIFSLNKNYRS
                     SRSILALANKVILNNERLYPKELIVTRNDEFKAPSLLTFEELFDQYQNIAKMILTSGV
                     SLEEIAVIFRNNSSSDGVEVALREQGIASVRKGSGSFFESLEVKAFSSMLALVVNPKD
                     IMAFIHLVQYTKGVGGVLAKEIFDALLKLGHGNLIKGFLDPDKNVNLQNHQKRNYQLG
                     LFADLEELASETRFKFESEFDAHPILKLSKINDLCARNLEKIYLFLKKAMEIKHSLTL
                     VNLICENSFYREICEELAIKRATNKAGQVDLLRKSENLEKIETKFNVLKELTKNYSDI
                     YKYYNFLTLGASEMSSGKGVNLLSVHASKGLEFDLVFVIDLAQGRFPNQKLMGMGGSL
                     EEERRLFYVAVTRAKNILYLSYAKYDKNKKTSFAPSRFLIEAGLCKGELTID"
BASE COUNT         4182 a         2462 c         1485 g         4514 t
ORIGIN      
        1 cttcaaaagc caaatcaagt gcttttgaaa gaacatcttt ttctatattt ctacctgctt
       61 gctgcatatc ttgccaagta aattcatggt ttacaggcaa aacagcttga gtgataatag
      121 gaccttcatc aagattatta tttacaaaat gtgccgtagc tccaattatt ttaacccctc
      181 tttcaaaggc ttgtttataa ggatttgctc ctataaatgc aggtaaaaaa gaatggtgaa
      241 tatttataat cttgccttca aaatgcctaa caaaatcagg agataaaatt cgcatatatt
      301 ttgctaaaac caaataatca aatttatatt gttcaagaca ttttaaaatc tgattttctt
      361 gctctttacg atctaaattt tcagcgctga taaaatgata aggaatttca aatttctcaa
      421 ctaaatcctt taaagagttg tgatttgaaa tcacagcttt gatatttgct tcaagttcgt
      481 tactataatg ctttattagc aaatctccca aacaatgact ttctttagta gcaaaaacaa
      541 caatatcttt ttttctcttc tcgcaaagct ctatcaaggc ttcttgtcca agcatagcct
      601 caagcgttcc tataaaagct tctttatcaa actcaccttc taaaagagca cgaaaaaaaa
      661 acattccttc gcctacaaat tcatcgtttt ttactatatt gatatgatat ttaaaaataa
      721 catcagaaat tctatagatt aaaccttttt gatctttggt gcaaattttt aatacagaaa
      781 tcatttagct aaacctttta tatattcttt taattcattc tctcttgctt cttgaagctt
      841 taggccaaga attttaccac aaaatccagc atttatgaaa tcttttgcta aaattttact
      901 ttcaaactta ttctcataaa gccctaatct tttagcttgc tcaatacgct ttttactcca
      961 aagtccaagc cattccttca aaggcatttc aaaagcaatt tttgctagtt caaaatcact
     1021 tatatcatca agataaaaag cttgatttgc gtattttagg tattcttttt taagtttagt
     1081 tcttttaaaa aatatatctt tttctaaatt aaaaaaattc aaatacaaat acaagaataa
     1141 agcatcgctt tttacaaatt ctctactttg tctgagtaaa ttttgaaatt ccaaactctt
     1201 aaaaacactc tcaaagccga aaacctgttt ctctaagcca agttcttgta aatatctata
     1261 gccgacatca agtctaggac ttttaaagaa tttataaagc tctgcattga tcctatcttt
     1321 gctaagatca gttatatcca tactttgcat caatttcaag ctttcgctag ttatcttaaa
     1381 gttaaacctt gaagcaaata ctaccgctct taatactctt aaactatcct cttgaaagct
     1441 ttgtttatca atatgcctta aaaagcctgc tcctagatct tttaatcctc cataaaaatc
     1501 taaaaactca tcgttaaaaa gattaatcat catagaattt atggtaaaat cgcgtctttt
     1561 ggcgccaagt ttttcatcat tacaaatttg aacttcaaaa cctttatgtc catagcttat
     1621 tttattttcg gttctagcaa gagctaaatc ataattttta aacttataca caaaaaaact
     1681 ttttccaaag ccttgtgcgc ccaatttttg cataatcttt tcaaaatctt taggttttat
     1741 atcataaagc tctatatcat agtcacaaat ttttaagcct aaaaacaaat ccctaacgct
     1801 acctccaacc aaatacgctc gtttggtata aggctttaaa aactcagcaa taaactgtaa
     1861 atcgggatta ttttttaagc ttatcttcga tatttgcaag taaaaactct aaaaaattta
     1921 tggtcaagtt taacctattt tcaagatcat ctttttttat gctatttaaa ccttcaaaaa
     1981 gaactaaaat tctctctcta agatgtttta aaaaaatatc ctcattaagc gtttgaacct
     2041 ctgtcataac actaggattt aaaatttcac tttgtaaaaa aggctcttct tttttaaact
     2101 ctttattttc ctgagtagaa atttcaatat tattttgtat tttttgctct tcttcaaatt
     2161 ttgccataga aattttatct tctaagtctt gcggagtatc aagctcttcg catacaaact
     2221 ccataggtgg taattcatct tttatttcag tttttctatt taattcttgt tcttttaaaa
     2281 tttcattttg tcttctttgc tcttccatga tagagctaac ttcgctaatg gtttttttag
     2341 ctaaatcttc caaattcata tttttatcaa ccacctttta aattcattaa tttcttcatc
     2401 gcttttcata ttaataaaaa aatccaacat ttgagtgttt aagtctttat gcttggatct
     2461 aaaaccacta agacgacgaa ccgcatcgat agcgttttga ttatccggat cttcttttaa
     2521 gatattttta taaatttcta aagcttcgtc ttttaaccct tgagcctcat agatagaagc
     2581 ttcagtgact gtatttttca tcactgtttc ctaaaatttt tctttaattc tagcaaaaag
     2641 ctttttaatt tatctttaag aaaataagat gttttttaat gtctattttg ttttaaacag
     2701 tttttctata tattcttttt tttctttctc taaactagaa tttaattctt tttgttcttt
     2761 tttaacttgc gcttttaaat cttgattttt aaaatacaca taatcaattc caaaaataac
     2821 accaattata ataagcaatg ggattaaaaa taccatcttt acactttaag aaaattgatt
     2881 aaatacacta ccatagtagc gaacattctc agcattttca tttttttcta tcgtttctat
     2941 tgcgccgcta ttgattgctt tttggatatc atcatttaaa tcttgataag aaaaaaccat
     3001 attaatactg ataatatttg gcaatttctc aagcatttta taagagttta actcatcttc
     3061 taaattttca ctttcaatca caactataat cttttcattt tcacaaagtt ctacagaaca
     3121 aaaaggaatt tcagatatag ccttttttaa atcatttata tattcttctt ttgctaaaat
     3181 caaaacacta gaaagattat tcatcaatac tcctaaacat tatactatca ccaaagcctg
     3241 aaacgataaa atctttattg tttaaaaaaa taataaactc actcatcaaa ttttcattat
     3301 taaaagtttt aacaggctta aaatcacttg tgctaaaaac ttcactaact ccagcttcat
     3361 tatcgctata aacagcgaat tctccactag gacttaaagc acaagtatat atcaaaaaat
     3421 ctttttgcaa aaaattttgc tcttcatttt ttacaactcc tatacgccta tccgttccac
     3481 aacttaaaat aacattattt ttaaaatcta cttgatagat attatcttta tgcattttat
     3541 catagttttt taacatcttc caatttttca aatcaaaaag ttctacttcg ccactctcaa
     3601 aacctgcaat tagtctactc ttatcttcat ttaaaactgc atcattaaga ctagaatggg
     3661 aaaaattaaa tttttttata ttttttaaac ttttatcaat caattctatt tcagaaccga
     3721 tagaaatcaa aagataagta ttttcattga taaaaaatgc ttttattatg ctattttctt
     3781 cgagcttttt gatttgtaaa ttttccttat aaaaacttaa atttttagca ccaaaatcac
     3841 cctcgctaag tattaaaagt gtatgtttaa aaatatcaat gttgtaaatt ttagcaaaat
     3901 tatcaccata ataattttta atctttggca aagataaaag ttctttcaaa cttttatctt
     3961 taatgttata ttgcaaaatt tcacctttat cagtgcctat atataagttt tgcttatcaa
     4021 gctttaaagc tgttatattg gcatttaatt tcagctcata agcataagac aagacacaaa
     4081 aaagactcaa aataaaaaga aattttttca tttatttact ttacaccctc attaatcaca
     4141 tcaattaaat ttgaacgact ttttaattgt tcatttttaa attcaggttt aaagctattt
     4201 ctcactaaag gttttgcatc actttgtgga acatgacact gagtgcaatt aaaacgacta
     4261 tcgctaatca catctcctgt ggttttattg tgtctaaaat cataataatg actagcagga
     4321 agtggagttg caccagcatc tgctgctata gccttatcat ggcagcttaa gcacatattg
     4381 ttatctttag ttataggtaa caaatcttca atagcatgcg gaattaatgg tggtgcattt
     4441 tcataagaac gctcaaaacg agtagattcc ccaggttgta aagttgtgaa atttgcttcc
     4501 actaaattta ctttattttc attttctaaa cttgcttttc taagtccaat ttgttccgaa
     4561 cttaccccac tattcattgc acaagcggca aaaaatacca ctgcagcact tcctaataaa
     4621 accaatttct tcttcattat ttattcctta aatcaaaaat attaaaattc aaagcatcat
     4681 cattacaaac ttctatacat cttgcacacc ttatacactc tcctgatttc acgctagtac
     4741 tttcttttcc aaccatccac aaaacctgtt tttcaggaca aatacggata cattcataac
     4801 atttagtgca tttatcacta tcatgcttta ttttaagcaa agcaaaacga gaaataaaag
     4861 cataaaaagc tcccagtgga caaaaatgtg aacaaattgc cctagggctt aaaaaagtat
     4921 caatacaaaa aagtataaag gctacaaaaa tccaagaact tgtagcaaaa ataatccctc
     4981 tatgtatcat tcctatataa gaaaaacttt caaacacagg caatgaaaat acaaaagaaa
     5041 ggactaaaac caagaccaat acaaaatagc gtaaattttt aggcaaaatt aaaaatttat
     5101 tattaagggt taatttattt cgcacaaaag cagcaaaatc tgtgattaaa ttaacaggac
     5161 aaacccaaga gcaaaaaacc cttcctaaaa acaaaccata gataaaaaat ataatcaaag
     5221 ctcctattaa agccactaaa tctatactcc agcttgctaa aatgatttgc aaaaccgcaa
     5281 aaggatcgct taaaggtatg gtattaaaaa gtctagaaga acttaaattt ccctgcaaga
     5341 taaaatctgt agctttaaaa ctaaaaagcg ctaaaattcc aagctgaacg atgcgtctag
     5401 caattaaata cttcatcaca gttctccatc atttaaataa ttggttgctt ttttagcatc
     5461 aaaatgtttt gaagtatctg cattttttat acgaccttca tctttttcat cccagccttt
     5521 tacataatga gatcctgcct ttcccaatac atactccctt ggcaaaacac gaatggccgg
     5581 tctttcagta atacaagcaa gttcacaaag cccgcaacct acacacactt catgatccac
     5641 actaggtagt aaaaaagcgt gcttggcggt gcgttcattg cgtttaagct caagttttaa
     5701 agccctatct atcaaaggac aagctctata acaagcatcg cattgaattc cccagtgtgc
     5761 cacacaagaa gcactatcaa caatagcaat acccattttc aaagattcta taccctgctc
     5821 taaatgcttt ttatctaaag catcagttgg acattctcta atgcaaggaa tatccttaca
     5881 aagatagcaa ggaatttctc ttgccttaaa aaaaggcgtg ccattttttg gactatctaa
     5941 caagctagca agctttaaag tatcataagg acaggctttt acacaaagcc cacaacgaat
     6001 acatttgctt aaaaatctag cttcatcttc agccccagga ggacgcaagg cataattatc
     6061 atcggctttt aaagccaaat tagccaaaaa tccacctcct gtacataaac atgcagcctt
     6121 aaaagcacta acaaaaaatt ctcttctacc tttcatttaa tcaaaaccct aaattaagcc
     6181 ttataaattt ttacagcgca ttttttaaag tcagtttgtt ttgaaagtgg acaagtcgca
     6241 tccaaagtaa ctttattgat atatacattc tcatcaaacc acggcacata cacaagtcct
     6301 acaggcggtt tgtttcttcc gcgcatatct actcttgctt ttactttacc gcgacgagat
     6361 tccacccaaa ccaaatcacc ttgatttaag cctaatttct ctccatcttt ctcactcata
     6421 tagcaaagtg cttcaggcac agcgcgataa agctcaggca cacgcatagt catagttcca
     6481 ctatgccaat gctctaaaac ccttcctgtt gcaagccaga atggatactc tttacttggt
     6541 ctttcaggtg ctttcataaa tggcctaaag aaaattttag ccttattttt aatactgtgc
     6601 tctttttcat ctttaggagc tattaaatcc ccatttgtaa gcattttgtt aaaatcacca
     6661 taaaaagcaa aatctgaatt tggagccgct tttttagcat aataatcaaa tttagtatta
     6721 aatctccact gtgtttcctt gccattaacc acaggccatc ttaaacctct tactttatga
     6781 taggtatcaa aatccgctaa atcatgtccg tgccctaagc caaatttacg atattcttcc
     6841 caaagatatt tttgaacgaa aaagccatag cctgtaaatt cttttccatc actgccttga
     6901 atttttctct catcaccttt aacatcggta ttatcaaagc cttttgcgat ggcatcgttt
     6961 ggattaaagc tttttgcttc tttattggca aatagcacat caaaaagtgt atcatcttcg
     7021 ctataaccca tagcttttgc ctcttctaaa acgcttggca aggtaagctt attatccact
     7081 ttttgctctt tccaaacttc tttaagctta aagcgttttg caaattctaa aatttgccaa
     7141 gtatcactca tggcagcacc tacaggtaag acttgttgtt tccaatgttg agttcttctt
     7201 tcagcattac cataagcacc ccatttttca taaatcatag cgcttggtaa aataagatca
     7261 gctacttttg ctgaaattcc aggataacaa tcacttacaa caataaaatt atccatttct
     7321 cttgctgctg cgatccagtg atttgcattt gcagtgtttt gccatggatt attcacttgc
     7381 acccatgcaa atttaatttt tccatcttct aaatctctca tgatattaag ataaggagaa
     7441 cctggttttg ggttgatagt ctttgcagga actttccaaa ttttttcaga aatttctctg
     7501 tgttttggat tggctacaac catatctgca ggcaaacgat gtgagaaagt tcctacttcc
     7561 ctagctgttc cacaggcact tggctgtcct gttaaagaaa aggctccact acctggttta
     7621 gcttgctttc ctagcaaaaa atgtaccata taagcttgtt catttaccca agaacctctt
     7681 gtgtgttgat taaagcccat agtccaaaaa cttacgactt tgcgattttt ctctatgtaa
     7741 agattagcta attcttgaag ttttttctta aaatcttcca aagactcatt atcatcacct
     7801 ttggctactc ttgcagtgta ttctaaagta taaggggcta aacctttttt aaattcgtca
     7861 aaagaaattt cccagttttt atcagccaca ccttgatgtt tcatttcaaa tttatcaccc
     7921 gctttaacgc caagataaga taaagaagta gcctcttcat cgtctaaagt gattacattt
     7981 tctttttcaa ccgtatcttt ttcactttct ttaaattttg gatgatttgg attatttctc
     8041 ataccataac caatatcagc ataaccagtt gcaaatacgc agtgatcttt gataaatttc
     8101 atatccatag cctctggatg attataaaca atctctcttg ctatgtagtt ccaaatagcc
     8161 aaatctgtat ttggtttaaa aataatttca atatcagcaa tatttgaagt acggttagaa
     8221 aaagtgctta gattaacaac tttaacctta tcaagattgc ttagttttct atcacttact
     8281 cttgaccaaa ggattgggtg catttcagcc atattagctc cccaagtgat aatagtatct
     8341 gtaagctcta tatcatcata acagcctgat ggctcatcta caccaaaagt ttgcataaaa
     8401 ccaaccactg cagaggccat acaatgtctt gcatttggat cgatattatt tgttctaaaa
     8461 cccgcttttg caagctttaa agcagcataa ccttcttgga tagtgtattg cccactacca
     8521 aaaatcccta tacctgtaac gccgagttca ttgtaggctt ttttaaattg tttttccatt
     8581 tcatcaaagg ctctctgcca agaaacttgt tgaaatttgc cttttttatc aaattcgcct
     8641 ttttcattca tgcgaagcaa aggcataaca agacgatctt caccatacat gatcttagca
     8701 ttaaaataac ctttgataca attaagtccg cgatttacgg gtgctgcagg atcacctttt
     8761 gttgctacga ttttgccatc ttttctagct atcataattc cacagccagt tccacaaaat
     8821 ctacaaacag ctttatccca tttccaatct tcttcttgcg cgccaagcat agagcttgga
     8881 acactaagcc ctgcaacact agcagcactt gcaatagcgg tatttttaat aaaatccctt
     8941 ctattcatcc ttattcctcc aaaataaaaa aatcatctta ttataaaaaa tgaagtataa
     9001 aaatctcttg aaattttaat aaaaataata attttaaagc tctattttat aggagtttta
     9061 ttgtcctttt tatattattc ttacacaaaa taaatattaa aaataatcaa cttaacaatt
     9121 aaaatataat caacttaaaa taataaaaaa atgaagatat aaaaattaag ccctaagaat
     9181 gggcttaatc aaaattaatg gcaaccacaa ccaccgcagc agctagaacc accaaaaaat
     9241 gcatcaagtt ttgcaatatc tggcatttct gtgatttcat ttacaagttc tttatatgcc
     9301 actttaccct ctttaatcac aaatacggca cgagctaaaa gcccttctaa agcaccttca
     9361 tttatcaaaa caccatattt ttcaccaaat tcttttgcca caaaatcgct tgcaacactt
     9421 aaattttcaa taccttctgt actgcaaaat cttcccatag caaaaggtaa gtccatactt
     9481 actacaatca cttcagcacc attgtaactg gctacttttt tattaaattc tctagcctct
     9541 gtagcacaaa ctggtgtatc taagcttgga acacttaaaa tgatttgagt tttacccgct
     9601 gcaccgattt caatcacgct taaatcttta gctttaagat ttaccttagg agcatctgct
     9661 ccaacttcta ctgaatttcc tttaagtttt acaggatttc ctttaaaatt tactgtactc
     9721 atttaatttc cttttttgat attttaaaca ttattgcaat taatgtttta ggagtgatta
     9781 tatcctataa atattaatta ttttttaatt tcactcaaaa ttattttact tctttccaag
     9841 tatatttttt ccacactttt tgagcttcct tactcttaat aaaatctaca aattctaaag
     9901 cttttttatt ttctaaacct ttttttgtag gagcaatttc agctgcacga taaatcactg
     9961 catttttatc tttgataaat aaagctttat catcgcctaa agcctttgcc caatgagacc
    10021 aaatgattaa agcatcaata tttggattgt tattccactc atctacagca gctttggaat
    10081 ttttagcata aatttttata tttttacgca attttaccaa attttctctt tttgcacttt
    10141 ttaaagccat atcttcataa agtccaactt gtcctgcgcc atcaaccacc ataacattta
    10201 tgtcatcttt taaaatgtct tcaaaatttt taatattttt tggattattt ggacgcacga
    10261 taatacctga tggacgcaca tttaaaacgc ttaaattttc caaacttaaa cttggaattt
    10321 ttttagcaaa atcatccatc attgaagtat tgcctgaaaa aatcaaatct gcattttctt
    10381 ttgctttgtc tatccaagct ggagttggac ctgcggttac aatcaccttt tcttttgttt
    10441 tttcttcaaa ttttaaagca agctctttta gcacaggagc gggaccacct ggaccataaa
    10501 ctaaaatttc agcatttaaa aaacttgctg ctgctaaact taaaattaat atttttttca
    10561 taaaataaac ctttctttat aataatataa aggaaatttt atcaatctat agttaactct
    10621 cccttgcaaa gccctgcttc tataagaaaa cgagaagggg cgaaagaagt ttttttattt
    10681 ttatcatatt tagcatagct taaataaagt atattttttg ccctagttac tgcaacataa
    10741 aaaagccttc tttcttcttc taagcttcca cccattccca taagcttttg attaggaaag
    10801 cgaccttgcg caagatcaat cacaaaaaca agatcaaatt ccaagccctt acttgcatgc
    10861 acactaagca aattaactcc tttgccacta ctcatttcgc ttgcacctaa agttagaaaa
    10921 ttataatact tataaatatc actataattt tttgtaagct cttttaagac attgaatttt
    10981 gtttctattt tttctaaatt ttcactcttt cttaataaat ccacctgtcc tgctttattt
    11041 gttgctcttt tgattgcaag ttcttcacaa atttctctat aaaaagaatt ttcacaaatt
    11101 aaatttacca aagtcaaaga atgttttatt tccatagctt tttttaaaaa aagataaatt
    11161 ttttctaaat ttctagcaca taaatcattg atttttgaaa gttttaaaat aggatgtgca
    11221 tcaaattcac tctcaaattt aaaacgagtt tcgctggcta attcttctaa atccgcaaaa
    11281 agcccaagtt gataatttct tttttgatga ttttgcaaat ttacattttt atcaggatct
    11341 aaaaaacctt ttattaaatt tccatgccct aattttaaaa gtgcgtcaaa aatttctttt
    11401 gctaaaactc cacccacacc tttggtatat tgaaccaaat gaataaaagc cataatatcc
    11461 ttaggattta ccacaagagc aagcatagag ctaaaagctt taacttctaa actttcaaaa
    11521 aaacttccac ttccctttct cacacttgca atgccctgct cccttaaagc tacttcaacc
    11581 ccatcagaac ttgagttgtt gcgaaaaatc acggcaattt cttccaaact tactccgctt
    11641 gtaagtatca ttttggctat attttgatac tgatcaaata attcttcaaa agtaagcaaa
    11701 gatggggctt taaactcatc atttcttgta acaataagtt cttttggata taatctttcg
    11761 ttatttaaaa tcactttatt agccaaagct aaaatacttc ttgatgaacg gtagttttta
    11821 tttaaagaaa aaatttttgc atctttaaaa cgatctttaa acccacctat gatattaata
    11881 tccgctccat taaaagcata aatactttga tcataatccc ctacgcaaaa caaactttta
    11941 ctatgaaaag cctctattaa ggaactttgc aaagtatttg tgtcttgata ttcatctact
    12001 aaaatttcat caaattcata tttttcttct tttaaaagat cttttagatt gataagcaag
    12061 tcattaaaat ctacataatt aaaacgcttt ttttcattat catattcttt taaaatatct
    12121 tcataaattt cagcataaat actttgatct tcgtagtttt ggcaaaacca agtataaaaa
    12181 tcttgattgt gcgctttgtt ttgaaacaaa gaataaagat catataaata acttgattga
    12241 taaggtttta tatcacttaa atgcctaaaa gttctttttt catagacact tttaagtaga
    12301 gtttttaact cgcttgcttg ctttaaggct atatttttat ccgcatttct aagtaaggta
    12361 taagccgtac tatgaaaagt tcctgcaagt attttactgg taatattttt atcaaaaaat
    12421 ttccctaaac gccctatcat ttctttactg gctttatttg tgaaagttaa aagcatgatt
    12481 ttttgaggtg ccactccctt gcttaaaaga taagaaattc ttgcaacaat agtagaagtt
    12541 tttcccgtcc ctgcacttgc aataacaaga ttgtgtccaa aatcagcagt agcagcaaga
    12601 tattgttcat tatttaattt tgaaagtggc attattttcc tta
//
LOCUS       DAPIWB010000048        11772 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.049, whole genome shotgun sequence.
ACCESSION   DAPIWB010000048 DAPIWB010000000
VERSION     DAPIWB010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11772)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11772)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11772
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.049"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            103..2340
                     /locus_tag="RJ266_001207"
     CDS             103..2340
                     /locus_tag="RJ266_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013463592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HDV7354947.1"
                     /translation="MDNFIKKAYDIVLKDYFDDFSPPSDNIPFCVLASKAYANNSLCF
                     NESISLIFVYKDIKAFHLKPMIKAFIEILNDAHLQIDSVILEFNGLYNASNELKTSII
                     QTRFICGSRILFKEIKIKFESIIKENKNDFAKLLLENFKEFDIPFIKQEFNILKDFGG
                     LNHLRSLESLLVLFKTSPKNYALNFIDEKKLSELRLAGDFLLSLKSAMNLLSAKDEDE
                     FLLINVHDLSELMYKKAKKHFGANELLVQKALQSMHTIGFYTHFLAKQIQDGLNHTLK
                     QEYKFKNLVEVLEYLLKLEDKHVIFDLNLVFALRRLKYGKKDIEKALILFEKIFYKRH
                     SFCVLKLLLDSGILKDLCKPFWTVRFLSDEEGNYSFDEQVFLMLSEFEKYEDELEILQ
                     KLKTDEKMILKLVILLSAIESENEISLAGIYRAYCSKFDLKNEILEWGLKIFKNNNAL
                     KDLVEKEDIYNPIVVSSLVSKLENLENLELLYTLTWLKAKALNYNAFYFRVLDKLLEN
                     AKQGFEDENLLEESARRVKKELTLKRSKIFLEQDEILQDKIIHIKSNLFIIKNTFEDI
                     VMISKLAKENDFKFWFNNETNLSLQIVAPLHFNIAIILSSLTNLNLIFMNFFELFDNK
                     IYLRFEYDNIISDEQKLKLCELLNSNLSGFNLKKIKKPIIKKDELKLDLNYSKMYAKL
                     GLNTKDQQGLMAYLMNVFNELELVLCAAKIQTIRQRTRNIFIFQKNEKLEHSEQKLVN
                     LLISE"
     gene            2345..4141
                     /gene="glmS"
                     /locus_tag="RJ266_001208"
     CDS             2345..4141
                     /gene="glmS"
                     /locus_tag="RJ266_001208"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HDV7354948.1"
                     /translation="MCGIVGYIGNNEKKQIILNGLKELEYRGYDSAGMAVMQEGELSF
                     FKAVGKLENLANKCTDFESQGYGFAIGHTRWATHGKPTEINAHPHLGQYSCVIHNGII
                     ENYKEIKDKLEKEGVSFLSQTDTEVIVQLFELYARNLGVFEAWQKTIKELRGAFATLL
                     VTKKDPNHVYFAKNAAPLIIGKNANKEWYFSSGDAPLIGSCDEVMYLEDLSLGYASKD
                     ELVVYENDILKSLCFSKLSGDKAYAKKDGFRFFMEKEIYEQSRVMSEVLMGRIQGDEV
                     VFDELNNEDLSQVDEITLCACGTSYHAAMASAYLFERIAKVKAKVEIASEFRYREAII
                     KKDSLFIVISQSGETADTLEALKIAKEQGAKTFAICNVDNSNIVRLAHLSLLTRAGIE
                     KGVASTKAFATQVLTLWMLAIFMAQKRNLNVSAEIKALLHTPNCVSVKQALHEKIHRL
                     SKRYLDGHGFFFIGRDVFYPLALEGALKLKELSYLHAEGYPAGEMKHGPIALADSKLY
                     TIALMPKHMLYEKTKSNVEELIARDSTVLSISPLEFDLSDDFIKTNEQDHYMCEFFEM
                     MVITQLLAMEISIRLGNDVDMPRNLAKSVTVE"
     gene            4144..7269
                     /locus_tag="RJ266_001209"
     CDS             4144..7269
                     /locus_tag="RJ266_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDV7354949.1"
                     /translation="MKKFFCLTLVCKLFALSEFELHHIDKVHKLGYSGDTIIIGVADD
                     AFNQDHISLKDKILKSTYPTDTAGKQLIPDLKKSTHGSHVAGIAVGAKIGDSKPYGVA
                     YGAKFYGAGVFPNGSYTQIPDIYNFFKDVSIINNSWGINFYPYFNLKASNSGLVDCTQ
                     TNQGTSYNICNTPLEYVMKADKVANDMMRLSKDKGVLNVFAAGNEGILSPALHAILPS
                     YDESLRAWLAVGALDANEITLESDGTLIIKSQGLADFSNGFKGATNFSLVAAGVNINN
                     VDSSTNDKFTKKSGTSMAAPMVSGTAALVKQNFPFLDGKQIADILLSTANKNYKAPKF
                     TVKQVTDGTNQPKFLIVYISQDPPRIEDEIKRDLKQLYNGIQVQVNGQWIDYSDYIWD
                     NRDSAQSQKLNTSTISSINGVVRVEKEELFGQGILDAQKALKGLSILDANRLSDQDVL
                     KYEQEPNTAYYTINTAGYDAEFSNDISQRKWDESTHLSSAINKPTHLTNLNIGLSKEG
                     EGILIISGQNTYEGATLIKQGELKLKGKVKNNAYVEQKAILSGNGIVGQNLNNKGIVR
                     PGNEDLNDLTVQGTYTQEGVDSKLQLDFGNYKNSKLIAKTYDIKSGNLEYIPLPKYYI
                     LNKPVKINLGDLEKSLSSFNHVLIQNTYALNFDFVLSDDLVSINKTLIKPNLKPNAYE
                     IPNTSLGNALRQLRSRADLSQTYQEFFASLDNGIDVKTKLNRIEGSGYLSTFSNHNQS
                     NLMQNNMLFTLHPLNINNFAQNNNILLASTYLPRIFSNEEYFWHLTPSYKYYKDKDFS
                     GQKTGANISLGENFSSGFLAYALSLSSAKFNFNNGSDLKSYNMDLLLNYNHDLDFIKI
                     LSGLGIGVGFNTLNRFVVEQPIEGKYKTLQTSAQLGVTKDIILGQDFIFNPLMYFTHS
                     FFYQEDFKENKSPFAKNYESLKHHSINANLGFNLAKNIEQDDYQASFSTFVIFEKRIY
                     GRTLENKASFVDFPIAFIQKYKLKDNILSQGFNSEFLYKNNVFWQFMLMNRFSHNAYE
                     LHLMSSVGKRF"
     gene            7325..8716
                     /gene="fumC"
                     /locus_tag="RJ266_001210"
     CDS             7325..8716
                     /gene="fumC"
                     /locus_tag="RJ266_001210"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HDV7354950.1"
                     /translation="MEYRVEHDTMGEVKVPNDKYWGAQTERSFENFKIGCEKMPKVLI
                     YAFANLKKSLALVNNKLGKLDDAKKNAIVQACDEIIAGKFDDNFPLAIWQTGSGTQSN
                     MNMNEVIANRATEIMGGDFRKEKLVHPNDHVNMSQSSNDTFPTAMSIVAVEQVEKKLI
                     PVLDELIATFEKKVKEFDGIIKIGRTHLQDATPLTLAQEFSGYLSMLLHSKEQIIASL
                     PTLRELAIGGTAVGTGLNAHPELSQKVSEELTQLIGTKFVSSPNKFHALTSHDAINFT
                     HGAMKGLAANLMKIANDIRWLASGPRCGLGELIIPENEPGSSIMPGKVNPTQCEAVTM
                     VAVQVMGNDAAIGFAASQGNFELNVFKPVIIYNFLQSLDLLADSMHSFNIHCAVGIEP
                     NRAKIDHNLHNSLMLVTALNPHIGYENAAKVAKNAHKKGISLKESAMELGLVSEEDFN
                     KFVDPTKMIGPKA"
     gene            complement(8746..9789)
                     /locus_tag="RJ266_001211"
     CDS             complement(8746..9789)
                     /locus_tag="RJ266_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDV7354951.1"
                     /translation="MQNGKFFLISFILVILFLLLYLFKGFLLVIIIASLMAVATSNIN
                     AKFLNLTKGHKFLASILTTTCMVLLFFAPFVYAMIELAKALKNFDINLVTQTLDYVKN
                     YQFTLPESFNFLEPKIKEFLASIDLNSISKQILSYASSFTKSGAKFLIDMVLICVFYF
                     FANLYGTELVIYLKSIIPIDKKELDDVLSEVGNVMAVVLYSMVIVAIFQGALFGLITM
                     FYGYDGILMGVIFAVSSLIPAIGGALIYVPVSLYEFASNNLNSALVIFIYSVIVISFI
                     ADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGIILGPAILTFFVST
                     LRMYVILKDKNLI"
     gene            complement(9793..10800)
                     /gene="ruvB"
                     /locus_tag="RJ266_001212"
     CDS             complement(9793..10800)
                     /gene="ruvB"
                     /locus_tag="RJ266_001212"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HDV7354952.1"
                     /translation="MDRIVEIEKYSFDETYETSLRPSNFDGYIGQESIKKNLNIFIAA
                     AKKRNECLDHILFSGPAGLGKTTLANIISYEMGANIKTTAAPMIEKSGDLAAILTNLS
                     EGDILFIDEIHRLSPAIEEVLYPAMEDYRLDIIIGSGPAAQTIKIDLPKFTLIGATTR
                     AGMLSNPLRDRFGMQFRLEFYKDSELALILQKAALKLNKTCEEKAALEIAKRSRSTPR
                     IALRLLKRVRDFADVNDEEIITEKRANEALNSLGVNELGFDAMDLRYLELLTAAKQKP
                     IGLASIAAALSEDENTIEDVIEPYLLANGYIERTAKGRIASTKSYSALKLNYEKTLFE
                     E"
     gene            10891..11301
                     /locus_tag="RJ266_001213"
     CDS             10891..11301
                     /locus_tag="RJ266_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphotransferase"
                     /protein_id="HDV7354953.1"
                     /translation="MGILTKLELDYEIDDIEKFLQFFRTMCDRFEPLIIKLGSDSVRY
                     KEAIKELETLAHNTAWAARRLNLEEVTDFCVFCEEMMAQANRFNGPASDEFTDWMLLM
                     SDQFEKYCRSYENDDSVLAVFNPLIVNVPNIISK"
     gene            11302..11660
                     /gene="ssrA"
                     /locus_tag="RJ266_001214"
     tmRNA           11302..11660
                     /gene="ssrA"
                     /locus_tag="RJ266_001214"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
BASE COUNT         4172 a         1531 c         2082 g         3987 t
ORIGIN      
        1 aaagaattag aaatttttaa aaaaaatctt agtttctata cccaaagttg tagaaaattt
       61 tttcttaagc aaggggcgtt tagcttatat cattctaaaa atatggataa tttcataaaa
      121 aaagcttatg atatagttct taaagattat tttgatgatt tttcacctcc aagtgataat
      181 atcccttttt gtgttttagc aagcaaagca tatgcaaata atagtctttg ttttaatgaa
      241 agtatttctt tgatttttgt ttataaagat attaaggctt ttcatttaaa acctatgatt
      301 aaggctttta tcgaaatttt aaatgatgcg catttgcaaa ttgattcggt tatcttagaa
      361 tttaatggac tttataatgc tagcaatgag cttaagactt ctataataca aactcgtttc
      421 atatgtggtt ctaggatttt atttaaagag attaagataa aatttgagag tattataaaa
      481 gaaaataaaa atgattttgc caagcttttg ctagaaaatt ttaaagaatt tgatattcca
      541 tttataaagc aagaatttaa tatcttaaaa gattttggcg gattaaatca tttaagatcc
      601 ttagagagtt tgcttgttct ttttaagact tctccaaaaa attatgcttt aaattttata
      661 gatgaaaaaa aattaagcga gttgcgttta gctggagatt ttttactttc tttaaaatca
      721 gcgatgaatt tattaagtgc taaagatgag gatgaatttt tacttattaa tgttcatgat
      781 ttgagtgaat taatgtataa aaaagctaaa aaacattttg gagcaaatga gttgttggtt
      841 caaaaggctt tgcaaagtat gcatactata ggtttttata cacacttttt agcaaagcaa
      901 attcaagatg gattaaatca tactcttaaa caagaatata aatttaaaaa tcttgtggaa
      961 gttttagaat acttattaaa acttgaagat aaacatgtta ttttcgatct taatttggtt
     1021 tttgccctaa gaagattgaa atacggtaaa aaagatatag aaaaagcttt aatacttttt
     1081 gagaaaattt tttataaaag gcatagtttt tgtgttttaa aacttttgct tgatagtgga
     1141 attttaaaag atttatgtaa gcctttttgg acagttcgtt ttttaagcga tgaagaagga
     1201 aattatagtt ttgatgagca agtttttctt atgttaagtg aatttgaaaa atacgaagat
     1261 gagcttgaga tactccaaaa acttaaaacc gatgaaaaaa tgattttaaa gcttgtgata
     1321 cttttaagcg ctatagaaag tgaaaatgaa atttctttag caggcatata tagagcgtat
     1381 tgctctaaat ttgatttaaa gaatgaaatt ttagaatggg gtcttaagat atttaaaaac
     1441 aataatgcct taaaagatct tgtagaaaaa gaagatatat acaatcctat tgttgtaagt
     1501 agcttggttt ctaagctaga aaatttagaa aatttagagc ttttatatac tttaacttgg
     1561 ctaaaggcta aggctttaaa ttataatgct ttttatttta gagttcttga taaactttta
     1621 gaaaatgcaa aacaaggttt tgaagatgaa aatctacttg aagaaagcgc aagaagagta
     1681 aaaaaagaat taacacttaa aagaagtaag atttttttag agcaagatga aattttgcaa
     1741 gataaaatca tacatatcaa atcaaatctt tttattataa aaaatacttt tgaagatatt
     1801 gttatgattt ctaaattagc caaagaaaat gattttaaat tttggtttaa taatgaaaca
     1861 aatcttagtt tgcaaattgt tgcaccactt cattttaata ttgccattat tttaagttct
     1921 ttaacaaatt taaatcttat tttcatgaat ttttttgaac tttttgataa taaaatttat
     1981 ttaagatttg aatatgataa tattatcagt gatgagcaaa aactaaaact ttgcgagctt
     2041 ttaaattcaa atctttctgg ttttaatttg aaaaaaatta aaaagccaat cattaaaaaa
     2101 gatgagttaa aattagactt aaactattct aaaatgtatg ccaaattagg tcttaatacc
     2161 aaagatcagc agggtttaat ggcgtatttg atgaatgttt ttaatgaact tgaacttgtt
     2221 ttatgtgcag caaaaattca aaccataaga caaaggacac gtaatatttt tatttttcaa
     2281 aagaatgaaa aattagaaca tagcgagcaa aagttagtta atttattaat aagtgagtaa
     2341 aaaaatgtgt ggaatcgtag gttatatagg aaataatgaa aaaaaacaaa ttatactaaa
     2401 tggacttaaa gaattggaat atcgtggcta tgatagtgcg ggtatggcag tgatgcaaga
     2461 aggagagctc agttttttta aagctgtagg aaagcttgaa aatttggcga ataaatgcac
     2521 ggattttgaa agtcaaggtt atggttttgc tataggtcat acaagatggg caactcatgg
     2581 taagcctact gaaatcaacg cacatcctca tttaggacag tattcttgtg tgattcacaa
     2641 tggtattata gaaaattata aagaaatcaa agataaactt gaaaaagaag gcgtgagttt
     2701 tttaagtcaa accgatacag aagttattgt ccagcttttt gaattatatg caagaaattt
     2761 gggagttttt gaagcttggc aaaaaaccat caaagaactt cgcggtgctt ttgctacttt
     2821 gttagtaaca aaaaaagatc ccaatcatgt gtattttgca aaaaatgctg ctcctttgat
     2881 tatcggtaaa aatgcaaata aagaatggta tttttcttca ggtgatgcgc ctttgatagg
     2941 aagttgtgat gaggtaatgt atcttgaaga tttaagcttg ggatacgcga gtaaagatga
     3001 gcttgtcgtt tatgaaaatg atattttaaa atcactttgt ttttctaagc tttcaggcga
     3061 taaggcttat gcaaaaaaag acggctttcg tttttttatg gaaaaagaaa tttatgaaca
     3121 aagtcgcgtg atgagtgaag ttttaatggg gcgtattcaa ggcgatgaag tcgtttttga
     3181 tgagctaaac aatgaagatt taagtcaagt agatgaaatc acgctttgtg cttgtggaac
     3241 aagctatcat gctgcaatgg caagtgctta tttgtttgaa agaattgcta aagttaaagc
     3301 taaagtagaa attgcaagtg aatttcgata ccgtgaagca attataaaaa aagattcttt
     3361 atttatcgtt atttctcaaa gtggagaaac agcagacact ttagaggctt taaagattgc
     3421 aaaagagcag ggtgctaaga cttttgcaat ttgcaatgtg gataattcta atatagtgcg
     3481 tttagcacat ctaagtcttt taactcgtgc gggcatagaa aaaggagttg cttcaactaa
     3541 agcttttgct actcaggttt taacactttg gatgcttgct atttttatgg cacaaaaaag
     3601 aaatttaaat gtttctgctg aaattaaagc acttttgcat actccaaatt gcgtgagtgt
     3661 aaaacaggct ttacatgaaa aaattcatcg tttatccaag cgttatttag atggacatgg
     3721 ctttttcttt ataggcagag atgtgtttta tcctttggct ttagaaggag ctttgaaact
     3781 taaagaatta tcttatcttc acgctgaggg ttatcctgca ggagagatga aacatggccc
     3841 tattgctttg gctgattcta agctttatac tatagcttta atgccaaagc acatgcttta
     3901 tgaaaaaaca aaatcaaatg ttgaagagct tattgctagg gattctacag tgcttagcat
     3961 ttcaccttta gaatttgatt taagtgatga ttttataaaa accaatgagc aagatcatta
     4021 tatgtgtgaa ttttttgaaa tgatggtcat tactcaactt ttggcgatgg aaatttccat
     4081 aagacttggc aatgatgtgg atatgccaag aaatttggct aaaagcgtaa cggtagaata
     4141 gaaatgaaaa aatttttttg tttaacttta gtttgtaaac tttttgcttt aagcgaattt
     4201 gaacttcatc atattgataa agtacataag ctagggtata gtggagatac tattataata
     4261 ggtgtagccg atgatgcttt taatcaagat catattagtt taaaggataa gattttaaag
     4321 tctacttatc ctactgatac agctgggaaa cagcttatac ctgatttgaa aaaatcaaca
     4381 cacggaagtc atgtagcagg tatagctgtt ggagcaaaga taggcgatag caaaccttat
     4441 ggagtggctt atggggcaaa attttatgga gctggggtgt ttccaaatgg ctcttacact
     4501 caaattcctg atatttataa ttttttcaaa gatgtgagta ttattaataa tagctggggt
     4561 attaattttt atccttattt taatcttaag gcttcaaatt ctggattagt agattgtact
     4621 caaactaatc aagggacaag ctataatatc tgtaatactc ctttggaata tgttatgaaa
     4681 gcagataagg ttgctaatga tatgatgagg cttagcaagg acaagggagt gttaaatgta
     4741 tttgctgctg gtaatgaagg aattcttagc cctgctttgc atgcgatttt accaagttat
     4801 gatgaatctt taagagcttg gttggctgtt ggagctttgg atgcaaatga gattacttta
     4861 gaatcagatg ggactttaat aattaaaagt caaggtttgg ctgattttag taatggtttt
     4921 aagggagcta cgaatttttc tttagttgct gctggagtaa atattaataa tgttgattca
     4981 agcactaatg ataagtttac aaaaaaaagt ggaacttcta tggcagcgcc tatggtaagt
     5041 ggaacagcgg cactggtcaa gcaaaatttc ccctttttgg atggtaagca aattgctgat
     5101 atactgttaa gtacagcaaa taaaaattat aaggctccaa aatttactgt taaacaagta
     5161 accgatggaa caaatcaacc taaatttctt attgtgtata tttcgcaaga tccacctagg
     5221 atagaagatg aaataaaacg ggatttaaaa cagctttaca atggaataca agttcaagtt
     5281 aatggacaat ggattgatta tagtgattat atttgggata atagagatag tgcgcagtca
     5341 caaaaactta atacttctac tattagttct attaatggag tagttagagt tgagaaagaa
     5401 gaattatttg gacaaggaat tttagatgca caaaaggcgt taaaaggact gagtatttta
     5461 gatgcaaaca gactcagtga tcaggatgta ttaaaatatg agcaagaacc taatacagct
     5521 tattatacta taaacactgc aggttatgat gctgaatttt ctaatgatat tagtcaaaga
     5581 aaatgggatg aaagtactca tttatcaagt gctattaata aacctacaca tttaactaat
     5641 cttaacatag gattatctaa agaaggtgaa ggtattttga ttatcagtgg tcaaaatact
     5701 tatgagggtg caactttaat caaacaagga gaattaaagc ttaaaggaaa agttaaaaat
     5761 aatgcttatg tagaacaaaa agcaatatta agcggtaatg gtattgtagg gcaaaattta
     5821 aacaataaag gcatagttag acctggaaat gaagatttga atgatttaac cgtgcaagga
     5881 acttatactc aagaaggagt tgactctaaa ttgcaacttg attttggtaa ttataaaaat
     5941 tctaaactga ttgcaaaaac ttatgatatt aagagcggga atttagaata tattccttta
     6001 cctaaatact atatcttaaa taagccagtg aaaattaatt taggagattt ggaaaaaagt
     6061 ttatcatctt ttaatcatgt tttgatacaa aatacctatg ctttaaattt tgattttgtt
     6121 ttaagtgatg atttagtgag tattaataaa accttaataa aacctaattt aaagccaaat
     6181 gcttacgaaa ttcctaatac aagcttggga aatgctttaa gacaattgcg atctagggca
     6241 gacttgagtc agacttatca ggaatttttt gcttctttag ataatggaat agatgtaaag
     6301 actaaattaa atagaataga aggttcaggg tatttaagca cttttagtaa tcataatcaa
     6361 tctaatttaa tgcaaaataa tatgttattt acccttcatc ctcttaatat taataatttt
     6421 gcacaaaaca ataatatctt acttgctagt acttatttac ctagaatttt tagcaatgaa
     6481 gaatattttt ggcatcttac tccaagttat aaatactata aagataaaga tttttcaggt
     6541 caaaaaacag gtgctaatat ctctttagga gaaaatttct catcaggctt tttagcttat
     6601 gctttatctc tttctagcgc taaatttaat tttaataatg gtagtgattt gaagagttat
     6661 aacatggatt tattgcttaa ttataaccat gatttagatt ttataaaaat attaagtgga
     6721 ttaggtatag gtgtaggatt taatactctt aatcgttttg tagtagagca gccaattgaa
     6781 ggcaaatata aaacattgca aacttcagcc cagcttggtg taactaaaga tattatttta
     6841 ggtcaagatt ttatttttaa tcctttaatg tattttacac atagtttttt ttatcaagaa
     6901 gattttaaag aaaataaaag tccttttgct aaaaattatg aaagtttaaa acatcatagc
     6961 ataaatgcaa atttaggttt taatcttgct aaaaatatag agcaagatga ttatcaagct
     7021 tctttttcta cttttgtaat ttttgaaaaa agaatttatg gaagaacttt agaaaataag
     7081 gctagttttg ttgattttcc tattgctttt attcaaaaat ataaattaaa agataatatt
     7141 ttaagtcaag gttttaattc agaattttta tataaaaaca atgtattttg gcagtttatg
     7201 ttaatgaata gattttctca taatgcctat gaattgcatt taatgagttc agtgggaaaa
     7261 cgtttttgaa agtatttatt tttttagctt ataataaata aaattttaat caaaggaaaa
     7321 aattatggaa tacagagttg aacatgatac catgggtgaa gttaaggttc caaatgacaa
     7381 atattgggga gctcaaactg aaagaagttt tgaaaatttc aaaatcggtt gcgagaaaat
     7441 gccaaaggtt ttaatctatg cttttgcaaa tcttaaaaaa tctttagctt tggtcaataa
     7501 caaacttggc aaacttgatg atgctaagaa aaatgctata gttcaagctt gcgatgagat
     7561 tatcgcaggt aaatttgatg ataattttcc acttgcgatt tggcaaacag gttcaggcac
     7621 acaaagtaat atgaatatga atgaagttat tgcaaatcgt gccactgaaa tcatgggcgg
     7681 ggattttcgc aaagaaaagc ttgtacatcc aaatgatcat gttaatatga gtcaaagttc
     7741 aaatgatact tttccaacag ctatgagtat cgttgcggtt gagcaagtag agaaaaagct
     7801 tatccctgtg cttgatgagc ttattgcaac ttttgaaaaa aaagtaaaag aatttgatgg
     7861 tattatcaag ataggacgca cgcatttaca agatgctact ccacttactc tagcgcaaga
     7921 atttagtgga tatctttcta tgcttttaca ttcaaaagag caaatcatcg cttctttacc
     7981 aactttaaga gaacttgcca taggaggaac cgcagtggga acagggctta atgcacatcc
     8041 agaattaagc caaaaagtaa gtgaagagct aactcaactt ataggtacaa aatttgtttc
     8101 aagtccaaat aaatttcatg ctttaacaag tcatgatgcg attaatttta ctcatggagc
     8161 tatgaaaggt ttggctgcaa atttaatgaa aattgcaaat gatataagat ggttagcttc
     8221 gggtccaaga tgtggtcttg gtgagcttat cattcctgaa aatgagccag gaagttcgat
     8281 tatgccaggt aaggtaaatc ctacccagtg cgaagctgtt actatggttg ctgtacaagt
     8341 gatgggaaat gatgcagcta tcggatttgc agcaagtcaa ggaaattttg aacttaatgt
     8401 gtttaagcct gtgattattt ataatttctt gcaaagtctt gatttgttgg ctgattctat
     8461 gcattcattc aatatccatt gtgctgtagg catagaacca aatcgtgcaa aaatcgatca
     8521 taatcttcat aattctttaa tgctagttac cgctctaaat ccacacatag gttatgaaaa
     8581 cgctgctaaa gtagccaaaa atgctcataa aaaaggtatt tctttaaaag aaagcgcaat
     8641 ggagcttggt ttggttagtg aagaagattt caataaattt gttgatccta ctaaaatgat
     8701 aggcccaaaa gcttagaaca taaaacttgc cttttttaag gcaagttaaa ttaaattctt
     8761 atcttttaaa atcacataca ttcttaaagt tgatacaaaa aaagttaaaa tcgcaggacc
     8821 tagtataata ccccaaaaac caaaggttga aattcctgct atcatggcca agaaaattaa
     8881 aagttcgttg attttggtag gggtttttac aagttttttg ttgatccatt tgatgattaa
     8941 aggtttgatt aaagtatctg ctataaaaga aattacaatt acagaataaa taaaaataac
     9001 aagagctgag ttaagattgt ttgaggcaaa ttcataaaga cttacaggca cataaattaa
     9061 agctcctcct atagcaggta tgagagaact tacagcaaaa attactccca ttaaaattcc
     9121 atcataacca taaaacattg tgattaaacc aaaaagtgca ccttgaaata ttgctacaat
     9181 taccatagag taaagcacaa cagccataac attacccact tcgcttaaaa catcatcgag
     9241 ttctttttta tcaataggaa tgatggattt aagatagata acaagttctg ttccatatag
     9301 atttgcaaag aaataaaaca cacaaattaa aaccatatct ataagaaatt tagctcctga
     9361 ttttgtaaaa cttgaagcat agcttagaat ttgtttagaa atgctattta aatctataga
     9421 agctaaaaat tctttgattt taggttctaa aaaattaaag ctttcgggca aggtaaattg
     9481 atagtttttg acataatcaa gtgtttgtgt aactaaatta atatcaaaat tctttaaagc
     9541 tttggcaagt tctatcatag cataaacaaa aggtgcaaag aaaagcaaaa ccatacaagt
     9601 tgttgtaaga atggaagcta aaaatttatg ccctttagta agatttaaaa atttcgcatt
     9661 gatatttgag gtagctaccg ccattaaact agctatgata attacaagta aaaaaccttt
     9721 aaaaaggtaa agcaaaagaa ataaaatgac taaaataaag cttataagaa agaattttcc
     9781 attttgcaaa atttactcct caaataaagt tttttcatag tttaatttta aagcactata
     9841 gcttttcgtg cttgctatac gcccttttgc agtgcgttct atatagccat tagctaataa
     9901 ataaggctcg attacatctt ctatggtatt ttcatcttca cttaaagccg cagcaatact
     9961 tgcaagcccg ataggttttt gcttagcagc ggttaaaagt tcaagatatc ttaaatccat
    10021 cgcatcaaaa ccaagctcat taacccctaa agaatttaag gcctcattag cccttttttc
    10081 tgtgataatc tcttcatcat taacatcggc aaaatctcta actcttttta aaagccttag
    10141 agctattcta ggggttgaac gacttctttt agcgatctca agtgcggctt tttcttcgca
    10201 agttttatta agttttaaag ctgctttttg caagatgagg gcaagttcgc tatctttgta
    10261 aaattctaat ctaaattgca taccaaaacg atcacgcaaa ggattgctaa gcatacctgc
    10321 acgcgttgta gcccctataa gagtaaattt tggtaaatcg atttttatgg tttgagcagc
    10381 tggaccacta cctatgataa tatcaaggcg gtaatcctcc attgcagggt aaagcacttc
    10441 ttcgatagca ggacttaagc gatgaatttc atcgataaaa agtatatctc cttcgctaag
    10501 attggttaaa atagcggcta aatctccgct tttttctatc ataggagcgg cggttgtttt
    10561 gatatttgca cccatttcat aggagatgat attagctagt gttgtttttc caagtcctgc
    10621 aggaccacta aaaagtatat gatctaaaca ttcattgcgt tttttggctg cagctataaa
    10681 gatatttaaa ttttttttaa tgctttcttg acctatataa ccatcaaaat ttgaaggacg
    10741 caatgaagtt tcataagttt catcaaagga gtatttttct atttctacta ttctatccat
    10801 atctttgctt atattttgga aaaattaaaa taagatttta gctaaaattt gctagaattt
    10861 acattaaact ttaatgatta tggtttaaaa atgggaattt taacaaaatt agaattagat
    10921 tatgaaattg acgatataga aaaattttta caatttttta gaaccatgtg cgataggttt
    10981 gaacctttaa tcatcaagct tggaagcgat agcgtgcgtt ataaagaagc cataaaagag
    11041 cttgaaactt tagcacacaa taccgcttgg gcagcaagac gcttaaatct tgaagaagtg
    11101 actgattttt gtgtattttg tgaagagatg atggcgcaag caaatcgctt taatgggcct
    11161 gctagtgatg aatttacgga ttggatgctt ttgatgagtg atcagtttga aaaatattgt
    11221 cgttcatatg aaaatgatga ttctgtttta gcggttttta atcctttaat tgttaatgtt
    11281 ccaaatatta tttctaaata agggagcgac ttggcttcga caggagtaag tctgcttaga
    11341 tggcatgtcg ctttgggcaa agcgtaaaaa gcccaaataa aattaaacgc aaacaacgtt
    11401 aaattcgctc ctgcttacgc taaagctgcg taagttcagt tgagcctgaa atttaagtca
    11461 tactatctag cttaattttc ggtcatcttt gatagtgtag ccttgcgttt gacaagcgtt
    11521 gaggtgaaat aaagtcttag ccttgctttt gagttttgga agatgagcga agtagggtga
    11581 agtagtcatc tttgctaagc atgtagaggt ctttgtggga ttatttttgg acaggggttc
    11641 gattcccctc gcttccacca tcacgctaat tttaagtaaa tcataagttt atttcaaatt
    11701 tttagaattt tttatatgaa gttaagatcg atttattacc cttaaaactt tgatatatta
    11761 agttttataa tt
//
LOCUS       DAPIWB010000049        11578 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.050, whole genome shotgun sequence.
ACCESSION   DAPIWB010000049 DAPIWB010000000
VERSION     DAPIWB010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11578)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11578)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11578
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.050"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..701)
                     /locus_tag="RJ266_001215"
     CDS             complement(<1..701)
                     /locus_tag="RJ266_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDV7354954.1"
                     /translation="MPQLSIIIPLFNSCDFILRALQSCINQTLKDIEILIIDDKSKDN
                     SLNMVLEFAKKDPRIKIFQNEENLGTFASRNLGVLHSSSDFIMFLDSDDFLTPGACEI
                     AFKEMKKGFDLLCFDAFVHRVKTKQFYRFKQDGVFNQKEFLEFLSKQRHFCWSVWAKC
                     FRKDIILKNFEKVKFEKVKIDERLSYGEDVLFCYVYFMFCEKIAVFKTCIYHYEFNPN
                     GRYENKNKEILNQNY"
     gene            760..1719
                     /gene="waaF"
                     /locus_tag="RJ266_001216"
     CDS             760..1719
                     /gene="waaF"
                     /locus_tag="RJ266_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HDV7354955.1"
                     /translation="MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTAL
                     FKEFPNSKIIIENKQSRYKQALSLRKELDKIDFSFAFRSAFSSKIILHILKTKQRYFF
                     DKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
                     SFGSAKRWDVSYFAKVALNFSQSHEILIFGTGKAEQELCNEIYQILKEQNIKVKNLCN
                     KTTIKTLCQNIAFCDLFITNDSGPMHISAVYKVKTVAIFGPTKFTQTSPWQNENARWV
                     HLNLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL"
     gene            complement(1700..2260)
                     /gene="gmhA"
                     /locus_tag="RJ266_001217"
     CDS             complement(1700..2260)
                     /gene="gmhA"
                     /locus_tag="RJ266_001217"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HDV7354956.1"
                     /translation="MINLVEKEWQEHQKIVQESEILKGQIAKIGELLCECLKKGGKIL
                     ICGNGGSAADAQHFAAELSGRYKKERKALAGIALTTDTSALSAIGNDYGFEFVFSRQV
                     EALGNENDVLIGISTSGKSPNVLEAFKKAKELNMLCLGLSGKGGGMMNKLCDHNLVVP
                     SDDTARIQEMHILIIHTLCQIIDESF"
     gene            complement(2257..3642)
                     /gene="rfaE1"
                     /locus_tag="RJ266_001218"
     CDS             complement(2257..3642)
                     /gene="rfaE1"
                     /locus_tag="RJ266_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase"
                     /protein_id="HDV7354957.1"
                     /translation="MLEFLSQQKPKILIIGDFMVDNYTWCDCSRISPEAPVLVAKTFK
                     EDKRLGGAANVYANLKSLGADVFALGVVGDDESGKFLQENLKGEFLIQKGRKTPFKNR
                     IMAHNQQVLRLDEEDTSEILLENELIALFDEKIKDFKAVVLSDYAKGILTPKVCKAVI
                     KKAKALNIPVLVDPKGSDFSKYSGATLLTPNKKEALEALKFENLEGENLEKGIKKLKE
                     DFSLRYSIITLSEVGIALFDEGLKIAPAKALEVYDVTGAGDSVIAVLAFCLANGIEIF
                     KACELANEAAAVVVSKIGSVSVSFDEIRSFKSMSFEKKIKNKEELLTLLKQNDKKIVF
                     TNGCFDIVHFGHIKYLEKAKRLGDILIVGLNSDASVKRLKGESRPVNSEFQRACMLAA
                     FYFVDFVVIFDENTPLELISFLKPDILVKGADYKDKLVVGSNLVSRVELIDFEEGFST
                     SKIIEKIKDKK"
     gene            complement(3635..4588)
                     /gene="rfaD"
                     /locus_tag="RJ266_001219"
     CDS             complement(3635..4588)
                     /gene="rfaD"
                     /locus_tag="RJ266_001219"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HDV7354958.1"
                     /translation="MRVAITGGAGFIGSQLALNLQEKHEILIIDKMRSSATFENGNLQ
                     SFGHFKNLLEFDGELFAGDINDEKVLKKIEDFKPEIIFHQAAISDTTVFDQTKVLQTN
                     LNTFKDFIELSIDLNAKLIYASSASVYGDAKSPQTVGKDEEPKNPYAFSKLMMDKLAK
                     KYYNKAHLVGLRYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSDQIYRDFT
                     YIKDVINANLIALDSKCGVYNVGSGKARTFQDIVDILQKELKTDLPCEYIPNPYVKSY
                     QFHTEAKLDQTWDYQPKFSLEEGIKDYLDEIKRLFEKEVNA"
     gene            complement(4589..5149)
                     /gene="gmhB"
                     /locus_tag="RJ266_001220"
     CDS             complement(4589..5149)
                     /gene="gmhB"
                     /locus_tag="RJ266_001220"
                     /EC_number="3.1.3.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-alpha-D-manno-heptose-1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HDV7354959.1"
                     /translation="MFIFFLKKLYYNVFMKTKALFLDRDGVINIDKKYVYKIEDFEFC
                     DGIFELCRYFLAKNYLLFIATNQSGIARGYYKESDFFKLCDYMLKEFAKQDIKIDKIY
                     HCPHLEGCECRKPKAGMLLKAKDEFNLDMKNSIFIGDNLSDMQAGLNANIGTLILVNE
                     EKKEGDFFRQFKNLKEILSFFKEKDI"
     gene            5231..5533
                     /locus_tag="RJ266_001221"
     CDS             5231..5533
                     /locus_tag="RJ266_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HDV7354960.1"
                     /translation="MKKLLVVSALACLGVSAFAADGATLFKKCAVCHGANADKVYLNK
                     VPALKTLSSAERLQYMKEYSEGKRNAYGQGAIMKLNLKGLTEEDFKAIEAHIETLK"
     gene            complement(5556..5762)
                     /gene="ccoS"
                     /locus_tag="RJ266_001222"
     CDS             complement(5556..5762)
                     /gene="ccoS"
                     /locus_tag="RJ266_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HDV7354961.1"
                     /translation="MNSIIMMMIGVSILAFFIILATLLWGIKNKQFDDDYKFTTLNDD
                     EDSLRDAIELERRKKEALDKKRLS"
     gene            complement(5759..8116)
                     /locus_tag="RJ266_001223"
     CDS             complement(5759..8116)
                     /locus_tag="RJ266_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase
                     metal-binding domain-containing protein"
                     /protein_id="HDV7354962.1"
                     /translation="MIMKCEHCKLDYKQAQMIEYKGKFFCCKGCESVWEILHESGLDE
                     FYEKLGNQTLSPVNFQNEMKNYDEFITKTKEGFSEIYLMIHGIECAACVWLNEKILTK
                     QEGILELDINHLNHKARIVFDEQSISLVQILRLIESIGYKASAYDASKASKKADLLKR
                     EFYSKLVVAIACVMNIMWIAVAKYAGFFSGMDKDTKDILNFAEFILCSPVLFYTGSHF
                     YKSAFKTLKMHSLNMDVLVISGASLAYVYSLWAMFFRVGEVYFDSVAMIICFVFIGKY
                     LEMFSKKRALDTIDGLNDFLQNEVLVFDGKEFVSKEVQKVCLGDRILLKTGDKILIDG
                     ICKSGEMSVDTSSLNGESIPKLIQKENEIFSACIVLDGSVEYEATKLYKDSKLSQIIQ
                     LLELASSKKAKLESLVNSLLAYFSRTVLLIAFICFAFWFFYKEESFEISLINAIAVLI
                     IACPCALALATPVSNLVALGRALKKHILFKSSSVIEDLSKCDCVVFDKTGILTKIELE
                     LKEVFLDKALDLNELYNFVKLSKHPISQNIASYLKQKGAKDLNLDFKKHSSIQAKGLS
                     AELNEELLLGGSSKFLQEKGIVAKEFDNTHFIFAKEGKILAFFEFDSVLREGAKELIA
                     YLKKEKKELMILSGDHQKAVEKIARKLEIQNYQASCLPEDKMKTIENLSKNYKVLFVG
                     DGVNDALALKYASVSMTLREGSDLAIESSDVLLLKNDLLSLKKAIKLSKNTFKIIKQN
                     LAFSLFYNACTIPLAFLGMINPLFAAISMSFSSIIVVLNALRIKE"
     gene            8225..9523
                     /gene="rho"
                     /locus_tag="RJ266_001224"
     CDS             8225..9523
                     /gene="rho"
                     /locus_tag="RJ266_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HDV7354963.1"
                     /translation="MEKEKKQHQRTHVPVEGYKIEELKLLDLENLVKIANECEIENPR
                     EFRRQELIFEILKAQTKKGGFILFTGILEISSEGYGFLRGMDSNLSDSVNDAYVSNSQ
                     IKKFALRVGDIVTGQVREPKDQEKYYALLKIEAINYLPLQEAKERPLFDNLTPIFPTE
                     KIKLEYDAMKLTGRVLDLFTPIGKGQRGLIVAPPRTGKTELMKELATAIAKNHPEMHL
                     IVLLVDERPEEVTDMQRCVKGEVFSSTFDLPAYNHVRVAELVIEKAKRMVETGKDVII
                     LLDSITRLARAYNTATPSSGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIVATAL
                     IDTGSRMDDVIFEEFKGTGNSEIVLDRNIADRRIYPAINIIKSGTRKEELLQGVANLQ
                     KIWAIRSAISQMDDVEALKFLYSKMLKTKDNVELLSIMNE"
     gene            9527..11056
                     /locus_tag="RJ266_001225"
     CDS             9527..11056
                     /locus_tag="RJ266_001225"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HDV7354964.1"
                     /translation="MLQALAIKYRPKTFDELIGQKTVSVSLKYALNHNRLAHAYLFSG
                     LRGSGKTSSARIFSRALVCEQGPSDTPCGTCKHCLAALEGKHIDIIEMDAASNRGLED
                     IQALIEQTKYTPSMARFKIFIIDEVHMLTPQAANALLKTLEEPPSYVKFILATTDPLK
                     LPATVLSRTQHFRFKQIPQSEILNHLKEILLKENVKFEEEALKFIARSGNGSLRDTLT
                     LLDQAIIFCQNEISISKITDMLGFLDPQKIKAFYQAILTKDKEKVFVYLEELQDYEAS
                     SVIDEMLFYLKESFFAKSTEFSTLIYERFFRILSKAKNMLCDDDGFTLCVMAFMMMEA
                     SHLKEIDAQIQEIKQENTTNIIPRITPSPIIPHLEKKTEKNAYEILLDSIYDRDFDLA
                     ECFKQSTNFISFENNTLNINSNAQGQNRDTLNKGFKLIQELFKAKFGENAKINVQKAL
                     TIDENKLQSLTQELPNNENKNIDIQSSINMLKEGAKKFDPQEDLKEALKDCFGEPSIE
                     N"
     gene            complement(11053..11148)
                     /locus_tag="RJ266_001226"
     CDS             complement(11053..11148)
                     /locus_tag="RJ266_001226"
                     /inference="COORDINATES: protein motif:HMM:NF021453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354965.1"
                     /translation="MSKVWNGLPDTTRLVTYMFLALIFISLKNDD"
     gene            complement(11259..11381)
                     /locus_tag="RJ266_001227"
     CDS             complement(11259..11381)
                     /locus_tag="RJ266_001227"
                     /inference="COORDINATES: protein motif:HMM:NF021453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2165 family protein"
                     /protein_id="HDV7354966.1"
                     /translation="MAITSPVIHHIGYIAIILFETFIALTALKKVLMICLKLEI"
     gene            complement(11395..11544)
                     /locus_tag="RJ266_001228"
     CDS             complement(11395..11544)
                     /locus_tag="RJ266_001228"
                     /inference="COORDINATES: protein motif:HMM:NF021453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2165 family protein"
                     /protein_id="HDV7354967.1"
                     /translation="MIRFSKIIILLTVASLAGIVVFGNVTDYNSNFQFVSHVMSMDTK
                     PDLFR"
BASE COUNT         4148 a         2142 c         1474 g         3814 t
ORIGIN      
        1 taataatttt gatttaaaat ttctttattt ttattctcat atcttccatt tggattaaat
       61 tcgtaatgat aaatgcaagt tttaaaaaca gctattttct cgcaaaacat aaaataaaca
      121 taacaaaaaa gcacatcttc gccgtaactc aaacgctcat cgattttaac cttttcaaat
      181 ttaacctttt caaaattttt taagatgata tcttttctaa aacacttcgc ccaaactgac
      241 cagcaaaaat gcctttgttt gcttaagaat tctaaaaatt ctttttgatt aaaaactcca
      301 tcttgtttaa aacgataaaa ttgtttggtt tttaccctat gtacaaaggc atcaaaacaa
      361 agcaaatcaa aacctttttt catctcttta aacgctattt cacaagcacc aggtgtcaaa
      421 aaatcatcac tatctaaaaa cattataaaa tcagaactag aatgcaaaac tcctaaattt
      481 ctacttgcaa aagtgcctaa attttcttca ttttgaaaga tttttatcct tggatctttt
      541 ttagcaaatt ctaaaaccat atttaaacta ttatctttac ttttatcatc gataatcaaa
      601 atttcaatat cttttaaagt ctgatttata caactttgca aagctcttaa gataaaatca
      661 caagaattaa aaagcgggat tatgatcgaa agttgtggca tatttttcct aaattttgtt
      721 aaaataataa aaacaattct atcaaagttt aggaaattta tgaaaatttt tatacatctt
      781 cccacttggc taggcgatgc agtgatggct tcgcctgctt tatacgctat aaaagaacat
      841 tttaaaaatg cccaatttat cctttatggc tctttggttt ccacagcact ttttaaagaa
      901 tttcctaatt ctaaaatcat catagaaaat aaacaatctc gctataaaca agccctatct
      961 ttacgcaaag aacttgacaa aatcgatttt agctttgctt ttaggtctgc gttttcttct
     1021 aagattatct tacatattct taaaacaaag caaagatatt tttttgacaa aaacaagcac
     1081 aaagaagaac atcaagtttt aaaatacctt tattttatag aaaactcact tagtataaaa
     1141 gctcatttta aagacttaaa gcttcccttt aagctaaaat ttcaaaaccc tcttgtctta
     1201 aaaaatggta aaaaaattct aggactcaac cctggtgcaa gctttggaag tgcaaaaaga
     1261 tgggatgtga gttattttgc taaagtggct ttaaatttca gccaaagtca tgagatttta
     1321 atctttggta caggaaaagc cgaacaagaa ctttgtaatg aaatttatca aattttaaaa
     1381 gaacaaaaca taaaagtaaa aaatctttgc aataaaacta ccatcaaaac cctttgtcaa
     1441 aatatcgctt tttgcgatct tttcatcaca aatgacagtg gacctatgca cataagtgcg
     1501 gtttataagg taaaaaccgt ggctattttt ggccctacga aatttactca aacttcacct
     1561 tggcaaaatg aaaatgcaag atgggtgcat ttaaatctag cttgtatgcc ttgtatgcaa
     1621 aaaacctgcc ctttaaaaca ccacaaatgc atgaaagatt taaagcctca aagggttata
     1681 gaagaggcta gaaatttact taaaaactct catctatgat ctgacaaagt gtgtgtatga
     1741 tcaaaatgtg catttcttga attctagccg tatcatcact tggcacgaca agattgtgat
     1801 cgcaaagctt attcatcatt ccaccaccct ttccactaag ccctaaacaa agcatattaa
     1861 gttcttttgc ttttttaaaa gcttctaaaa cattgggact ttttccactg gttgaaatgc
     1921 cgattaaaac atcattttca tttcctaaag cctccacttg tcttgaaaaa acaaactcaa
     1981 aaccatagtc atttcctata gcactaagcg ctgaagtatc ggttgtaagt gctatacctg
     2041 ctaaagcctt gcgttctttt ttataacgcc cactaagttc agctgcaaaa tgctgtgcat
     2101 cagctgcact tccaccattt ccgcaaatta aaattttacc acctttttta agacattcac
     2161 ataaaagctc gcctatttta gcgatttgtc cttttaaaat ttcactttct tgaacgattt
     2221 tttgatgttc ttgccattct ttttctacta aatttatcat tttttatcct taatcttttc
     2281 tataatctta ctcgtactaa atccttcttc aaaatcgatt aattcaactc ttgaaaccaa
     2341 atttgaacct acaacaagtt tatctttata atcagctcct ttaaccaaaa tatcaggctt
     2401 taaaaagctt ataagttcta aaggtgtgtt ttcatcaaaa atcactacaa aatctacaaa
     2461 ataaaaagct gccaacatac aagctctttg aaactctgaa tttacaggac gactctcgcc
     2521 tttgagtctt ttcacactcg catctgagtt caaacctaca atcaaaatat cgcctaatct
     2581 tttagctttc tcaagatatt ttatatgtcc aaaatgcacg atatcaaaac aaccatttgt
     2641 aaaaacaatc tttttatcat tttgtttcaa aagcgttaaa agctcttctt tatttttgat
     2701 ctttttctca aaactcatac ttttaaaact tctaatctca tcaaaactca cactcacact
     2761 acctatttta cttaccacaa cggctgcagc ttcattggca agttcacaag ctttaaaaat
     2821 ttcaatccca tttgccaaac aaaaagccaa aacggcaatc acactatcac ccgctcctgt
     2881 tacatcataa acttctaagg ctttagcagg tgcgattttt aaaccctcat caaaaagcgc
     2941 aatccccact tctgaaagag tgatgataga ataacgcaaa gaaaaatctt cttttaattt
     3001 tttaatccct ttttctaaat tttcaccctc taaattttca aatttcaaag cttctaaagc
     3061 ttctttttta ttaggcgtga gtaaggttgc accgctatat ttactaaaat cactgccttt
     3121 aggatcaact aaaacaggaa tatttaaagc cttagccttt tttatcacag ccttgcaaac
     3181 cttaggcgtt aaaataccct tagcataatc gcttaaaacc acagctttaa aatctttaat
     3241 cttttcatca aacaaagcta taagttcatt ttcaagcaaa atctcacttg tatcttcttc
     3301 atctagtctt aaaacctgct gattgtgtgc cataatgcga tttttaaaag gggttttgcg
     3361 tcctttttgg atcaaaaatt ctccttttaa attttcttgt aaaaatttcc cactctcatc
     3421 atcacccaca acaccaagcg caaaaacatc agctcccaag ctttttaaat ttgcataaac
     3481 attcgcagcc ccgcctaatc ttttatcttc tttaaaggtt ttagctacta aaacaggggc
     3541 ttcaggactg atacgcgaac aatcacacca agtataatta tccaccataa aatcccctat
     3601 aattaaaatt ttaggttttt gctggcttaa aaactcaagc atttacttcc ttttcaaaaa
     3661 gtctttttat ctcatctaaa taatctttaa tcccctcttc aagactaaat tttggttgat
     3721 aatcccaagt ttgatctagt tttgcttcag tatggaattg ataagatttt acataaggat
     3781 ttgggatata ttcacaaggc aaatcagtct ttaactcttt ttgcaaaata tcaactatat
     3841 cttgaaaggt tcttgcttta ccactgccta cattataaac tccgcatttt gaatcaaggg
     3901 cgattaaatt ggcattaata acatctttaa tataagtaaa atctctataa atttgatcac
     3961 ttccttcaaa caatcgtgga ttttttcctg ctaaaatttg atggccaaat tgcaaaacca
     4021 tagaagcggt tttgttttta taaaattcgc cttttccata aacattaaaa tatctaagtc
     4081 ctaccaaatg agctttattg taatattttt tcgctaactt atccatcatc aattttgaaa
     4141 aagcataagg attttttggt tcttcatctt tacctacagt ttgtggactt tttgcatcac
     4201 cataaaccga agctgaactt gcataaataa gctttgcatt aagatctatg ctaagttcta
     4261 taaaatcttt aaaagtattt aaattggttt gcaaaacctt agtttgatca aaaaccgtag
     4321 tgtctgaaat tgctgcttga tgaaaaataa tctctggctt aaaatcttca atctttttta
     4381 aaactttttc atcgttaata tcgcctgcaa aaagttctcc atcaaattca agtaaatttt
     4441 taaaatgtcc aaaactttgt aaatttccat tttcaaaagt cgcactgcta cgcattttat
     4501 caatgattaa aatttcatgt ttttcttgca aatttaaagc cagttgcgaa cctataaatc
     4561 ctgcaccacc tgtgattgct actctcattt aaatgtcctt ttctttaaaa aaactcaaaa
     4621 tttcttttaa atttttaaat tgtctaaaaa aatcgccttc ttttttttct tcatttacta
     4681 aaatcaaagt gccaatatta gcatttaacc ctgcttgcat atcgcttaga ttatctccga
     4741 taaaaataga atttttcata tctaaattaa actcatcttt tgcttttaaa agcattcctg
     4801 ctttaggttt gcgacattca caaccttcta aatgcggaca atgataaatt ttatcaattt
     4861 ttatatcttg cttggcaaat tctttaagca tataatcaca aagcttaaaa aaatcacttt
     4921 ctttataata tcctcttgca atgcctgatt gatttgtcgc tataaaaagc aaataatttt
     4981 tagctaaaaa atatctacaa agttcaaaaa ttccatcaca aaattcgaaa tcttctattt
     5041 tatagacata ttttttatct atattgatca caccgtctct atctaaaaat aatgcttttg
     5101 ttttcataaa aacattataa tatagctttt ttaaaaagaa aataaacatt atctttaatt
     5161 tcttaagatt tttattaaaa ataaagatat ataataccta gcaatctaat ttttactaag
     5221 gagaaaacaa atgaaaaaat tattagtagt ttctgctttg gcatgtcttg gcgtttctgc
     5281 ttttgctgca gatggtgcta cactttttaa aaaatgtgca gtatgccatg gtgcaaatgc
     5341 tgacaaagtt tacttgaaca aagttccagc tttaaaaact ctttcttctg ctgaaagact
     5401 tcaatatatg aaagaatatt cagaaggtaa aagaaatgct tatggtcaag gtgcgatcat
     5461 gaaacttaac cttaaaggtt taactgaaga agattttaaa gctatcgaag ctcatattga
     5521 aactttaaaa taatttctaa aaaaggcttt cctttttaag aaagcctttt tttatccaaa
     5581 gcttcttttt tacgcctttc taattctata gcatcacgca aagaatcctc atcatcattt
     5641 aaagtagtaa atttataatc atcatcaaat tgcttatttt taatccccca aagcaaagtt
     5701 gccaaaatga taaaaaacgc taagatagaa acccctatca tcatcatgat tatactattc
     5761 attctttgat ccttaaagca tttaaaacga ctattatact actaaaagac atagaaatag
     5821 cagcaaataa aggatttatc atacccaaaa aagccaaagg tatggtacaa gcattataaa
     5881 acaaagaaaa agcaagattt tgcttgataa ttttaaaggt atttttagat aatttgatgg
     5941 ctttttttaa agaaagcaag tcatttttta aaagcaagac atcactactc tcgatggcta
     6001 gatcacttcc ttctcttaaa gtcatcgaaa cacttgcgta ttttaaagct agtgcgtcat
     6061 ttaccccatc acctacaaat aaaactttgt aatttttgct taaattttct atagttttca
     6121 ttttatcttc aggcaaacaa gaagcttgat aattttgaat ttctaatttt ctagctattt
     6181 tttccactgc tttttgatga tcgccactga gtatcattaa ttctttcttt tcttttttaa
     6241 gataagcgat aagctctttt gcaccttctc ttaaaacact atcaaactca aaaaaagcta
     6301 aaattttacc ttccttggca aaaataaaat gcgtattatc aaattcttta gccacaatac
     6361 ccttttcttg caaaaattta gaacttccgc ctaaaagcaa ctcttcattt aactcagcac
     6421 ttaaaccttt agcttgaata ctcgaatgct ttttaaaatc caaatttaaa tccttagctc
     6481 ctttttgctt taaatacgac gcaatatttt gagatatagg atgtttagaa agttttacaa
     6541 aattataaag ctcatttaaa tcaagcgctt tatctaaaaa aacctcttta agttcaagct
     6601 ctattttggt taaaataccc gttttatcaa acaccacaca atcacatttg cttaaatcct
     6661 ctatcacgct agaactttta aacaaaatat gtttttttaa agccctacct aaagctacaa
     6721 gattgctcac tggcgttgct aaagccaaag cacaaggaca agcgataatc aaaactgcaa
     6781 tcgcattaat taaagaaatt tcaaaactct cttccttata aaaaaaccaa aaagcaaaac
     6841 aaataaaagc aatcaataaa accgttctag aaaaataagc caaaagacta ttaaccaaac
     6901 tttcaagttt tgctttttta gagcttgcaa gttctaaaag ctggataatt tgactgagtt
     6961 ttgaatcttt gtaaagcttt gttgcttcat actccacact tccatcaagc actatacaag
     7021 ctgaaaaaat ttcattttct ttttgtatga gttttggaat actttctcca tttaaagaag
     7081 aggtatccac gctcatttca ccacttttac aaatcccatc gattaaaatt ttatctccag
     7141 ttttaagtaa aattctatct cctaaacaaa ccttttgcac ttctttagaa acaaattctt
     7201 taccatcaaa aaccaaaact tcattttgca aaaaatcatt aagcccatct atagtatcta
     7261 aagcacgctt tttgctaaac atctcaagat atttacctat aaaaacaaag caaattatca
     7321 tcgccacaga gtcaaaatac acttccccta ccctaaaaaa catggcccat aaagaataaa
     7381 cataagccaa actcgctccg ctaatcacca atacatccat atttaaacta tgcattttta
     7441 aagttttaaa agcactttta taaaaatgag atcccgtata aaaaagcaca ggagaacaaa
     7501 ggataaattc agcaaaattt aaaatatcct tagtgtcctt atccataccg ctaaaaaatc
     7561 ctgcgtattt tgccactgct atccacatga tattcatcac acaagctata gccacaacaa
     7621 gcttagaata aaattccctt tttagtaaat ccgctttttt tgaagccttg ctcgcatcat
     7681 aagcactcgc tttatagcct atgctttcaa taagtcttaa aatttgcacc aaagaaatgc
     7741 tttgctcatc aaaaacaatg cgtgctttat ggtttaaatg attaatatca agttctaaaa
     7801 ttccttcttg tttggttaaa attttctcat taagccacac acaagctgca cattctatac
     7861 cgtgtatcat gagataaatt tcactaaatc cttctttggt tttagtgata aactcatcat
     7921 aatttttcat ttcattttga aaatttacag ggcttaaagt ttgatttcca agcttttcat
     7981 aaaactcatc taatccactt tcatgtaaaa tttcccaaac gctctcacaa cctttacaac
     8041 aaaaaaattt acccttatac tctatcattt gggcttgttt ataatcaagt ttgcaatgtt
     8101 cacatttcat aatcattctt taaaaaaata ttttttataa ttataaacaa atttgacaaa
     8161 aagtgcattt ttttattaaa atcacatttt acaaaaatta ttctgctaaa tcttacgagg
     8221 acttatggaa aaagaaaaaa aacaacatca aagaacccac gttccagtgg aaggttataa
     8281 aatcgaagaa ttaaaattat tagatttaga aaatctagtt aaaatcgcta atgaatgtga
     8341 aatcgaaaac ccaagagaat ttcgccgcca agaacttatt tttgaaattt taaaagcaca
     8401 aacaaaaaaa ggcggtttta tactttttac agggatttta gaaatttctt ccgaaggtta
     8461 tggcttttta agaggtatgg actctaatct tagcgatagt gttaatgacg cttatgtttc
     8521 aaattcacaa attaaaaaat ttgctctgcg tgtaggcgat atcgttacag gacaagttag
     8581 agaaccaaaa gatcaagaaa aatactacgc tcttttaaaa atcgaagcga tcaattatct
     8641 gcctttacaa gaagccaaag aaagaccttt gtttgataac ttaaccccta tttttccaac
     8701 agaaaaaatc aaactcgaat acgatgcaat gaagcttaca ggtcgtgttt tggatctttt
     8761 tactcctata ggaaaaggac aacgcgggct tatcgttgct ccaccacgca caggtaaaac
     8821 agagcttatg aaagaacttg ctactgctat tgcaaaaaac cacccagaaa tgcatttaat
     8881 cgtactttta gtcgatgaaa ggcctgaaga agttaccgat atgcaaagat gtgtaaaagg
     8941 cgaagttttt agttctactt ttgatttacc tgcttataat catgtgcgtg tagccgaact
     9001 cgtgatagaa aaagccaaaa gaatggtaga aacaggcaaa gatgttatca tcttacttga
     9061 tagtatcaca agactggcac gtgcttataa caccgcaact ccaagcagtg gaaaagtcct
     9121 aagcggcggg gtggatgcta atgccctaca caaaccaaaa cgcttctttg gtgcagctag
     9181 aaatatagaa aatggaggct ctttaaccat agttgctaca gctttaattg atacaggttc
     9241 aagaatggat gatgtgattt ttgaagaatt taaaggcaca ggaaatagcg aaatagttct
     9301 tgatagaaat atcgccgata gaagaattta tcctgcgatt aatatcatca aatcaggaac
     9361 aagaaaagaa gaattgctcc aaggcgtagc aaatcttcaa aaaatttggg caatccgttc
     9421 agcgatttct caaatggatg atgttgaagc gttgaaattt ttatattcta aaatgcttaa
     9481 aaccaaagac aatgtagaac ttttatctat aatgaacgag tagaaaatgc ttcaagcttt
     9541 agcgattaaa tacagaccaa aaacctttga tgaactcata ggacaaaaga cagttagcgt
     9601 aagtttaaaa tacgccctaa atcataatcg cttagctcat gcttatcttt tttcaggact
     9661 tagaggaagt ggaaaaactt cgagtgctag aattttttct cgtgctttag tttgcgaaca
     9721 aggaccaagt gatactccat gtggcacttg caaacactgt cttgcagcac ttgaaggcaa
     9781 acatatagac attatagaaa tggatgctgc aagcaaccgt gggcttgaag atatacaagc
     9841 cttaatcgaa caaaccaaat acaccccttc tatggcaaga tttaaaattt tcatcattga
     9901 tgaagtacat atgcttaccc cacaagctgc aaatgcgctt ttaaaaacct tagaagaacc
     9961 cccaagttat gttaaattta tacttgcaac cacagatcct ttaaaacttc cagctactgt
    10021 gctttcaaga acacaacatt ttcgctttaa acaaattcca cagagtgaaa ttttaaatca
    10081 tcttaaagaa attttactta aagaaaatgt taaatttgaa gaagaagctt taaaatttat
    10141 agcaagaagc ggcaatggat ctttaagaga tactttaacc ttgcttgacc aagctattat
    10201 tttttgtcaa aatgaaatca gcattagtaa aattacagat atgctaggat ttttagatcc
    10261 tcaaaaaatc aaagcctttt accaggctat cttaacaaaa gacaaggaaa aagtttttgt
    10321 gtatttagag gaattacaag actatgaagc ctcaagcgtg attgatgaaa tgctttttta
    10381 tttaaaagaa agtttttttg caaaaagcac agaattttct actttaattt atgaaagatt
    10441 tttccgtatt ttatcaaaag ctaagaatat gctttgcgat gatgatggct ttacgctttg
    10501 tgttatggct tttatgatga tggaagcaag tcatttaaaa gaaattgacg cacaaatcca
    10561 agaaatcaaa caagaaaata caacaaatat tatacctagg atcacacctt ctcctatcat
    10621 acctcatctt gagaaaaaaa cagaaaaaaa tgcttatgaa atcttgcttg atagtattta
    10681 tgatagggat tttgatcttg cagaatgctt taaacaaagt acaaatttta ttagttttga
    10741 aaacaatact ttaaatataa actcaaacgc acaaggacaa aatcgcgata cactcaataa
    10801 aggttttaaa ctcatacaag aactttttaa agctaaattt ggagaaaatg ctaaaattaa
    10861 tgtgcaaaaa gcactaacaa ttgatgaaaa taagcttcaa tccttaactc aagaattacc
    10921 aaacaatgaa aataaaaaca tagatattca aagttctatt aatatgctta aagaaggggc
    10981 caaaaaattt gacccacaag aagatcttaa agaggctctt aaagattgtt ttggagagcc
    11041 tagtatagaa aattaatcat catttttaag agagatgaaa atcaaagcta aaaacatata
    11101 agttaccaat cttgtagtat caggtaaacc gttccaaacc ttactcatcc acattccaaa
    11161 ccattctgca gcaacttact tggaaggcaa aaaaccataa aatacacaag ttaaagaaat
    11221 aatcccaaaa atcttagcat tatgaaagct ttgagcatct aaatttctag ctttaaacat
    11281 atcataagca ccttttttag agctgttaag gcaataaaag tttcaaaaag aataattgct
    11341 atatagccta tatgatgaat cacgggagaa gtaatagcca tataaactac agcattacct
    11401 aaataaatca ggctttgtat ccatactcat cacatgcgaa acaaattgga aattagaatt
    11461 gtaatctgtc acatttccaa aaaccactat acctgctaac gatgcaacgg taagcaaaat
    11521 aataattttt gaaaatctaa tcattttgct tatgcaaaaa catttttgtt gcatttat
//
LOCUS       DAPIWB010000050        11464 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.051, whole genome shotgun sequence.
ACCESSION   DAPIWB010000050 DAPIWB010000000
VERSION     DAPIWB010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11464)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11464)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11464
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.051"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..455)
                     /locus_tag="RJ266_001229"
     CDS             complement(<1..455)
                     /locus_tag="RJ266_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7354968.1"
                     /translation="MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNL
                     DINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNH
                     QHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCS"
     gene            complement(455..1225)
                     /gene="ptmA"
                     /locus_tag="RJ266_001230"
     CDS             complement(455..1225)
                     /gene="ptmA"
                     /locus_tag="RJ266_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin modification protein PtmA"
                     /protein_id="HDV7354969.1"
                     /translation="MLENKIIFVAGACGRIGKALCQKILLSKGIPILADINKERLNKL
                     QENLETNFKTKLLSLELDITKQESLQTALQKSQERYGKIDAFVNSSYPFGKDWGKTPY
                     YELKYEQICESLNLHLAGFMLAAQEFVKFFKQQGYGNIINLSSIMGVYAPKFENYEGT
                     SMQSSLEYSVIKAGINHMSSWLAKELFNQNIRVNTLASGGILDNQNELFLKAYRKCCA
                     SKGMLDADDVCGTLVFLLSDESRFITGQTLVVDDGWGL"
     gene            complement(1225..1932)
                     /gene="legF"
                     /locus_tag="RJ266_001231"
                     /gene_synonym="ptmB"
     CDS             complement(1225..1932)
                     /gene="legF"
                     /locus_tag="RJ266_001231"
                     /gene_synonym="ptmB"
                     /EC_number="2.7.7.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMP-N,N'-diacetyllegionaminic acid synthase"
                     /protein_id="HDV7354970.1"
                     /translation="MAEILCTICARGRSKGVKNKNIKKINELEMIAYSIIQAQNSKLF
                     KHIVISTDSDEIASVAQKYGAEVFFKREAHLANDRAAKLPVMRDALLRSEEHFKTCFE
                     TLIDLDASAPLRSSLDIKKAYESFVENDNSNLITAVPARRNPYFNLVEIQNNKVVKSK
                     EGNFTTRQSAPKCYDMNASIYIFKRDYLLENDSVFGKNTGLFVMDESTAFDVDSELDF
                     KIVEFLISLKNLSPKDF"
     gene            complement(1925..2830)
                     /gene="ptmF"
                     /locus_tag="RJ266_001232"
     CDS             complement(1925..2830)
                     /gene="ptmF"
                     /locus_tag="RJ266_001232"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glutamine-D-fructose-6-phosphate isomerase
                     subunit"
                     /protein_id="HDV7354971.1"
                     /translation="MKVLIIGFGSIGKKHFLALKNLKYEVSLLSLSAKKEEFEKTQIY
                     RSLKECHLNEFDLFIIANITTEHFNTLKALNELVKDKIILVEKPLFEKSQNFTSSKNH
                     IYVAYLLRFHPVIVALKKLLKGEKIYFASLVCNSYLPHWRALDYRQNYSAKKELGGGV
                     LLDLSHEIDLAFFLFGNLELIYSQNAKISELDITSDDFAFLVLKNSQKAKIHIELDYF
                     SKFNKREMTIHTLEKSFKADLINNKIEIYHKNQSQKILNFENDTIKTLQNLHQAVFEK
                     DKELCDLKQALKVLELCDEVRKKNG"
     gene            complement(2827..3852)
                     /locus_tag="RJ266_001233"
     CDS             complement(2827..3852)
                     /locus_tag="RJ266_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HDV7354972.1"
                     /translation="MDINKLKLTPDSSIEEALKIVGQERVRLGIIVDKKDKFLGVISD
                     SNIRKALISGKTLKDSIKDIYTKNPITIKENTSKEQLLKISAKTDIYDFPVLDEKGQI
                     LSIKSVSSLLKTNPNSIVIMAGGLGSRLKELTKDTPKPMLKVGKKPILESIIQRLKNQ
                     NFENFIFCVNYKKQIIEDYFQKGQKFGVKISYIKERKKLGTAGALSLIKQEFKESFIV
                     MNADILTELNFNDLLKAHKKSKALMSVCVREFEQQIPYGVITQKQGFIENIEEKPTQK
                     FLVSAGIYVLENEILNLIAKNEYLDMPELIKLALQKGKVNTYTINDYWIDIGRPDEFL
                     KANEDFK"
     gene            complement(3861..5015)
                     /gene="legG"
                     /locus_tag="RJ266_001234"
     CDS             complement(3861..5015)
                     /gene="legG"
                     /locus_tag="RJ266_001234"
                     /EC_number="3.2.1.184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-N,N'-diacetylbacillosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HDV7354973.1"
                     /translation="MSKRKICIVSATRAEWYLLRNLCHEIQNDKDLSLQIIATGAHLS
                     PEFGLTYKEIEKEFKITKKIPILLANDDKISLCKSMSLAFSAFSDAFEDLKPDMVVIL
                     GDRYEMLSVASVCLLMHIPLVHLCGGELTLGAIDDSIRHSISKMSHLHFVSHEIYKKR
                     LLQLGEEEKRVFNIGSLASTIIKNMNFLNKKDLEKALEMKLDKELYLITYHPLTLNVK
                     NTQKEIKTLLKKLDTLKNASLIFTKANADENGLLINEILQNYCQKNSHKAKLFDNLGS
                     QKYLSLMKIAKAMIGNSSSGISESPFFKTPCINIGDRQKGRLRTQNIIDCEINDLDQA
                     FEKLESKEFKQNLKNFKNPYDNDKNPNKFIKTCLKNANLDTILHKNFIDL"
     gene            complement(5008..6012)
                     /gene="legI"
                     /locus_tag="RJ266_001235"
     CDS             complement(5008..6012)
                     /gene="legI"
                     /locus_tag="RJ266_001235"
                     /EC_number="2.5.1.101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,N'-diacetyllegionaminate synthase"
                     /protein_id="HDV7354974.1"
                     /translation="MKKTLIIAEAGVNHNGDLNLAKKLIEIAADSGADFVKFQSFKAK
                     NCISTKAKKAPYQLKTTASDESQLQMVQKLELDIKAHKELILHAKKCNIAFLSTPFDL
                     ESVDLLNELGLKIFKIPSGEITNLPYLKKIAKLNKKIILSTGMANLGEIEEALNVLCK
                     NGAKRQNITLLHCTTEYPAPFDEVNLKAMQSLKDAFKLDVGYSDHTQGIHISLAAVAL
                     GACVIEKHFTLDKNMSGPDHKASLEPHELKTLCTQIRQIQKAMGDGIKKASKSEQKNI
                     NIVRKSLVAKKDIQKGEIFSEENLTTKRPANGISAMRYEEFLGKIATKNYKEDELIRE
                     "
     gene            complement(6052..6726)
                     /locus_tag="RJ266_001236"
     CDS             complement(6052..6726)
                     /locus_tag="RJ266_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDV7354975.1"
                     /translation="MQNSLETYTMKYNENGYGLLFPDGHVVRFYERILKYKLNKINGN
                     LLDFGCGNGVHSAYFQSKGFKTFGIDIVPSLKEIWEQNIRGGGYCKIIEPNSSIKGLF
                     DENMDIIFANQSLYYIPLKELKQNILEFYELLNTGGILFATMMSKKNYYFSHSQKEEK
                     NGLSKVEINGRLNETSFIHFIDKAQDLENLFQPFETLFLGDYDPINFYNFEGSAHHYV
                     YIGIKK"
     gene            complement(6744..7865)
                     /locus_tag="RJ266_001237"
     CDS             complement(6744..7865)
                     /locus_tag="RJ266_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl sugar amidotransferase"
                     /protein_id="HDV7354976.1"
                     /translation="MIYCDHCVMPNTRPGINFTKDKEGKNICSACINHKNKENIDYKA
                     RFKELEALCDKYRRMNGKFEYDCAIAVSGGKDSHFQVHIMKEKLGMNPILFSVEDNFT
                     MTEAGKKNLRNLSETFGCHILSLKPDIKTQKKVMLKTFEKYGKPTWFIDRLIYSYPFA
                     MALKFNTPLLVYGENVSYEYGGSDDKETPSAKEIFLNGTASDLDINEFIDNEIKEENL
                     QLFFNPNANDINKLNPIYLSYFVKWNSYSNYIFAKSRGFTDLEGEWDRTMCAENFDQV
                     DSIGYILHAWMKYPKFGHACASDYAARFVRYGLLSRKEAIELVQKRDRKLDNRCVEDF
                     CNFIGISKTTFWKIVEKHYNMDLFYKNDFGEFKLKNKLQ"
     gene            complement(7982..8374)
                     /locus_tag="RJ266_001238"
     CDS             complement(7982..8374)
                     /locus_tag="RJ266_001238"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354977.1"
                     /translation="MSMDDLNCDFIHFFNTIYIKLIELCGSNLERFTPLKDLKKLGFH
                     IICSKGNRGALANLLLFNEIASFFKIIEKYDYNFKECQTVYDLLYEKRNLLNIIDTIG
                     IELCNKICKNLKEDDENFYHPKIFKKTL"
     gene            complement(8371..8628)
                     /locus_tag="RJ266_001239"
                     /pseudo
     CDS             complement(8371..8628)
                     /locus_tag="RJ266_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788892.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase"
     gene            complement(8701..9242)
                     /locus_tag="RJ266_001240"
                     /pseudo
     CDS             complement(8701..9242)
                     /locus_tag="RJ266_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815677.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
     gene            complement(9202..9348)
                     /locus_tag="RJ266_001241"
     CDS             complement(9202..9348)
                     /locus_tag="RJ266_001241"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7354978.1"
                     /translation="MQNLIQSIKKFNKKKYENSGGGGDLIFLLLLLGEVREKCHHHRS
                     GWLC"
     gene            complement(9353..10507)
                     /gene="legC"
                     /locus_tag="RJ266_001242"
     CDS             complement(9353..10507)
                     /gene="legC"
                     /locus_tag="RJ266_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase LegC"
                     /protein_id="HDV7354979.1"
                     /translation="MFKKEISFIKSLFNKENIALHEPCFIGNEKKYLLECIDSGFVSS
                     VGEFVTRFEEALKEKTKARFVIATNTGTAALHIALLANGIDENCEVITQSISFVATAN
                     AIAYTGAKPVFLDIDENTLSLSPKALEHFLENQTYQKDNLSYNKTTHKPIKACVIMHT
                     FGLSAHIKAIKELCEKYHILLIEDAAEALGSTYENKALGTFGKCGILSFNGNKIITGG
                     CGGAILSDDENLAKLARHLSTTAKIPHPYEYDHDRIAYNYRLCNINAAILLAGLENLE
                     LFLENKRELAKIYKDFFKNHDKCKFIDEKSNEKSNFWLNTLLFKDENLRNIFLEECLK
                     NNIFVRPVWKSLPSLKAFQNCQSNELINTKKLEKRLINLPSSVRIANKKE"
     gene            complement(10500..11462)
                     /gene="legB"
                     /locus_tag="RJ266_001243"
     CDS             complement(10500..11462)
                     /gene="legB"
                     /locus_tag="RJ266_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_038816896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,6-dehydratase LegB"
                     /protein_id="HDV7354980.1"
                     /translation="MLVTGADGFIGSHLCESLVKKGFKVRALSQYNSFNFWGHLEKSP
                     FLKDMEVVSGDLRDSFFCEKITKNIDAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNM
                     LEAAKKNEISHFIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSYYNS
                     FNLNVNIARPFNTYGPRQSARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDTCEG
                     FISLLNLKHFGEVYNIGSGVEYSMQEVLDLIQKILDSKVKIIQDEQRLRPKNSEVFRL
                     CCDANKLKKATNWQSKISLEEGLRQSIEYFKENLENYKSELYNV"
BASE COUNT         3541 a         1860 c         1647 g         4416 t
ORIGIN      
        1 ctagagcaaa aattagaaaa aaattctata tccaaagaac ttgtttgcaa aatcatcaat
       61 cttgaatttt gtaattcatt tgaaaaatct aaaacatgaa acatgaccca aatgatttct
      121 atatcttttt caaaaacaat aatatgttga tgatttttat tttgcaataa agctttaaat
      181 aaaattccat ttccaaaacc ataaaaatac aatacaggat aaagtagata tttatcatta
      241 taagtgttta gcatagagtt taattcatca ataacatttt cataaagaaa agtattatca
      301 cttgtatctt ttaaattgat atctagatta tctttaccta aaacaagttc aaatttactt
      361 gatttaattt cttttaaact ttcttttaaa agaatattgc ttaaagcctc aatgtttttg
      421 ttaaagagtt ctttttgagt aggggtgaag gtcatcataa gccccatcca tcatctacta
      481 ctaaggtttg ccctgtgata aatctactct catcactaag caaaaatacc aaggttccgc
      541 acacatcatc agcatctaac atacccttgc ttgcacaaca ttttctataa gcttttaaaa
      601 aaagttcatt ttgattatcc aaaattcctc cacttgctag ggtattaacg cgtatgtttt
      661 gattaaaaag ctctttagct agccaagagc tcatgtgatt aatccctgct tttatcacac
      721 tgtattctaa agagctttgc atggaagtgc cttcatagtt ttcaaatttt ggcgcataaa
      781 ctcccatgat ggagctaaga ttgatgatat taccatagcc ttgttgttta aaaaatttca
      841 caaattcttg agcggctagc ataaagcctg ctaaatgtaa atttaaactt tcgcaaattt
      901 gttcgtattt gagttcataa taaggcgttt taccccaatc tttgccaaaa ggatagcttg
      961 agttaacaaa agcatcgatt ttgccgtatc tttcttgact tttttgaagg gcggtttgta
     1021 agctttcttg tttagtgata tcaagttcta agcttaaaag ttttgtttta aaatttgttt
     1081 ctaaattttc ttgcaattta tttaagcgtt ctttgttgat atctgcgagt atagggatac
     1141 ctttgctaag aagtattttt tgacaaagcg ctttacctat acgcccacaa gctcctgcta
     1201 caaagatgat tttattttca agcattaaaa atcctttggc gataaatttt ttaaagagat
     1261 taaaaactct acgattttaa aatcaagttc actatctaca tcaaaagctg tgctttcatc
     1321 cattacaaaa agccctgtgt ttttgccaaa aacactatca ttttctaaaa gataatccct
     1381 tttaaagata taaatactag cgttcatatc atagcatttt ggggcacttt ggcgagtggt
     1441 aaaatttcct tctttggatt ttactacctt gttattttgt atttctacga ggttaaaata
     1501 aggattgcgt ctagcaggaa ctgcggtgat gagattggaa ttatcatttt caacaaaact
     1561 ttcataagct ttttttatat caaggcttga gcgaagcggg gctgaagcat ctaagtctat
     1621 gagagtttca aaacacgttt taaaatgctc ttcacttctt agcaaggcat cacgcatgac
     1681 aggaagtttt gcagcccgat cattggcaag atgagcttct cttttgaaaa aaacttcagc
     1741 accatatttt tgggctacac ttgcgatttc atcactatca gtacttatga ctatgtgttt
     1801 aaaaagcttt gaattttgag cttgtatgat gctataagct atcatttcaa gttcgttaat
     1861 ctttttaata tttttgtttt taacgccttt gcttctacct ctagcacaaa tggtacataa
     1921 aatttcagcc attttttttc cttacttcat cacaaagttc aagtactttt aaagcttgct
     1981 taagatcgca aagttctttg tctttttcaa agactgcttg atgtaaattt tgaagggttt
     2041 ttatcgtatc attttcaaaa tttaagattt tttgactttg atttttgtga taaatttcga
     2101 ttttattgtt tattaaatcg gctttaaagc ttttttctaa agtatggatg gtcatttctc
     2161 ttttgttgaa tttagaaaaa tagtctaatt ctatatgaat tttagctttt tgtgaatttt
     2221 ttaaaaccaa aaaggcaaaa tcatcgcttg ttatgtcaag ctctgaaatt ttagcatttt
     2281 gggagtatat aagctctaag tttccaaaaa gaaaaaaggc tagatcgatt tcatgagaga
     2341 gatcgagtaa aaccccacca cctagctctt ttttagcgct gtaattttgc ctgtagtcta
     2401 aagccctcca atggggcaaa taagaattac aaaccaaact agcaaaataa attttttcac
     2461 cttttaaaag tttttttaaa gctacaatca caggatgaaa acgcagtaaa tatgctacat
     2521 aaatgtgatt ttttgagctt gtgaaatttt ggcttttttc aaataaaggt ttttctacga
     2581 gtatgatttt atcttttaca agctcattta aagcttttaa ggtgttaaaa tgctctgtgg
     2641 tgatatttgc gatgataaaa agatcaaatt catttaaatg acattctttt aaggaacgat
     2701 agatttgagt tttttcaaac tcttcttttt tagcacttaa agaaagcaaa cttacttcat
     2761 actttaaatt ttttaaggct aaaaaatgct tttttcctat gcttccaaag cctatgatta
     2821 agactttcat ttaaaatcct cattggcttt taaaaactca tctggccttc caatgtcgat
     2881 ccaataatca ttgatggtat aggtatttac cttacctttt tgtagagcga gtttgatgag
     2941 ttctggcata tctaggtatt catttttagc aattaaattt aaaatttcat tttcaagtac
     3001 ataaatcccc gcacttacta ggaatttttg ggtaggtttt tcttctatat tttctataaa
     3061 accttgtttt tgagtgatca ctccataagg aatttgttgc tcaaactcac gcacgcaaac
     3121 gctcattaaa gcttttgatt ttttatgcgc ttttaaaaga tcattaaaat taagctcggt
     3181 taaaatgtct gcattcataa cgataaaact ttctttaaat tcttgtttta taaggcttaa
     3241 agcccctgct gtacctagtt ttttacgctc tttaatataa gaaattttaa ccccaaattt
     3301 ttgccctttt tgaaaataat cttctatgat ttgtttttta taattcacac aaaagataaa
     3361 attttcaaaa ttttgatttt taagtctttg gattatgctt tctaaaatgg gttttttgcc
     3421 tacttttaac ataggttttg gagtatcttt agtcagctct tttaagcgag atcctaagcc
     3481 tccagccatg atgacaatgg agtttggatt ggtttttaaa agcgatgaga cagattttat
     3541 ggaaagaatt tgcccttttt catctaaaac aggaaaatca taaatatcgg ttttagcaga
     3601 aatttttaaa agctgttctt tgcttgtgtt ttcttttatg gtgatgggat ttttagtgta
     3661 aatatccttg atactatctt ttaaagtttt gccactaatt aaagcttttc tgatgtttga
     3721 atcactaatg actcctaaaa atttatcctt tttatcaact ataatgccta gtctaacgcg
     3781 ttcttgcccg actattttta aagcttcttc tatgcttgaa tcaggggtga gtttgagttt
     3841 gtttatatcc acgctaagcc ttataaatcg atgaaatttt tatgtaaaat tgtatctaaa
     3901 tttgcatttt ttaggcaagt ttttatgaat ttattgggat ttttatcatt atcataaggg
     3961 tttttaaaat tttttaaatt ttgtttaaat tctttgcttt ctaatttttc aaaagcttga
     4021 tcaagatcgt tgatttcgca atcaatgata ttttgagttc ttaaacgccc tttttgtcta
     4081 tcgcctatat taatgcaagg agttttaaaa aaaggacttt cactaatacc gcttgaagaa
     4141 ttgcctatca tggctttggc tattttcata agacttaggt atttttgtga gccaagatta
     4201 tcaaaaagtt tagccttgtg tgagtttttt tggcagtaat tttgcaaaat ttcattgatt
     4261 aaaagtccat tttcatcggc atttgctttg gtaaaaatca aacttgcgtt tttaagggtg
     4321 tcaagttttt taagtaaggt tttaatctct ttttgagtat tttttacatt taaggttaaa
     4381 ggatgataag tgattaagta aagttcttta tctagtttca tttctaaggc tttttctaaa
     4441 tcttttttgt ttaaaaaatt catatttttt atgatagtag aagctaaaga acctatatta
     4501 aaaacccttt tttcttcttc tccaagttgc aaaagccttt ttttataaat ttcatgactt
     4561 acaaaatgta aatgtgacat ttttgaaatg ctgtgtctta tactatcatc aatagcccct
     4621 aaagtaagct ccccgccaca taaatgcact aaaggtatgt gcatcaaaag acatacactt
     4681 gctacgctaa gcatttcata acgatcgcct aaaattacca ccatatcagg ttttaagtct
     4741 tcaaaagcat cgctaaaagc actaaaagct aaactcatgc ttttgcaaag gcttatttta
     4801 tcatcatttg caagtaggat aggaattttc ttagtgattt taaattcttt ttctatttct
     4861 ttataagtga gtccaaactc agggcttaaa tgtgctcctg tagcgatgat ttgaaggctt
     4921 agatctttat cgttttgaat ttcatgacat aaatttctta aaagatacca ttcagccctt
     4981 gttgcactga ctatacaaat ttttctttta ctcacggata agctcatctt ctttgtagtt
     5041 tttagtagca attttaccta aaaactcttc atatctcata gcacttatac catttgcggg
     5101 gcgtttggta gtaagatttt cttcgctaaa aatttctcct ttttggatgt cttttttagc
     5161 cactaaactt tttcttacta tgttgatatt tttttgttcg cttttgcttg ctttttttat
     5221 gccatcaccc atagcctttt gtatttgtct aatttgagtg caaagcgttt ttagttcatg
     5281 aggttctaga cttgctttat gatcaggtcc tgacatattt ttatctaggg taaaatgctt
     5341 ttctatcaca caagctccca aggcaaccgc agctagggaa atgtgtatgc cttgagtgtg
     5401 atcagaataa cccacatcaa gtttaaaagc atcttttaag ctttgcatgg ctttaagatt
     5461 gacttcatca aaaggggcag ggtattctgt agtgcagtgt aaaagagtga tattttggcg
     5521 tttagcgcca tttttgcaaa gcacatttaa agcttcttct atctcgccta aatttgccat
     5581 gcctgttgaa agtatgattt ttttattaag ctttgcaatt tttttaagat agggtagatt
     5641 ggtgatttct ccgcttggaa ttttaaagat ttttaagcct aactcattta aaagatctac
     5701 actttcaaga tcaaaaggag tagaaagaaa ggcaatattg catttttttg cgtgtaagat
     5761 aagctcttta tgagctttaa tatcgagttc gagtttttgt accatttgaa gctgactctc
     5821 atcactagct gtggttttaa gctgataggg tgctttttta gcctttgtgc tgatacagtt
     5881 tttggcttta aaactttgaa atttaacaaa atcagcgcct gaatctgctg cgatttctat
     5941 taacttttta gctaaattta aatcaccatt gtgattaact cctgcttctg cgatgataag
     6001 agtttttttc atagttttgc ctttattttg ccttaaaata aaggcaaaat tttatttttt
     6061 aatacctata taaacataat ggtgtgctga tccttcaaaa ttataaaaat taataggatc
     6121 ataatctcct aaaaataaag tttcaaaagg ttgaaaaaga ttttctagat cttgggcttt
     6181 atcaataaaa tgtataaagc ttgtttcatt taatcttcca ttaatttcaa ctttactcaa
     6241 gccatttttt tcttcttttt gactgtggga aaaataataa tttttcttgc tcatcattgt
     6301 agcaaaaagt attccacccg tgtttaaaag ttcgtaaaat tctaaaatat tttgtttgag
     6361 ttcttttaag ggtatatagt aaagactttg atttgcaaag atgatatcca tattttcatc
     6421 aaaaagtcct ttgatactag aatttggttc tataatttta caatatcccc cccccctaat
     6481 attttgctcc caaatttctt ttaaacttgg aactatatct attccgaagg ttttaaaccc
     6541 tttgctttga aaatacgctg aatgtacacc attgccacaa ccaaaatcaa gtaaatttcc
     6601 atttatttta tttagtttgt attttaaaat tctttcataa aaacgtacta catgaccatc
     6661 tggaaaaagt aatccgtatc cattttcatt atatttcatt gtataagttt ctaatgagtt
     6721 ttgcatttct ttcctttata tttttattgt aatttatttt ttaatttaaa ttctccaaaa
     6781 tcatttttat aaaataaatc catattgtaa tgtttttcta ctattttcca aaatgtagtt
     6841 ttactaatac ctatgaaatt gcaaaaatct tcaacgcatc tattgtcaag cttacgatct
     6901 cttttttgca caagttcaat agcttctttt ctgcttaaaa gtccataacg cacgaaacga
     6961 gctgcgtaat cactcgcaca agcatgacca aatttagggt atttcatcca agcgtgtagg
     7021 atatagccta tactatcaac ttgatcaaaa ttttctgcac acattgttct atcccattcg
     7081 ccttctagat cagtaaaacc acgactttta gcaaaaatat aattgctata agaattccat
     7141 tttacaaaat aacttagata aataggatta agtttgttga tatcatttgc attgggatta
     7201 aaaaagagtt gtagattttc ttctttgatt tcattatcta taaattcatt tatatctaaa
     7261 tcactagctg taccatttaa aaatatttct ttggcgctag gagtttcttt gtcatcacta
     7321 cctccatatt cataactaac attttctcca taaaccaata aaggtgtatt aaattttaaa
     7381 gccatagcaa aaggatagct gtaaatcagt ctatcaataa accaagtggg ttttccatat
     7441 ttttcaaagg tttttagcat aacttttttt tgagttttga tatcaggctt taagctaagt
     7501 atatgacaac caaaagtttc acttaagttt ctaagatttt tcttacctgc ttcagtcatg
     7561 gtgaaattat cttcaacgct aaaaagaata ggattcattc caagtttttc tttcatgata
     7621 tgcacttgaa aatgcgaatc tttacctcca cttacggcaa tagcgcaatc atattcaaat
     7681 tttccattca ttctgcggta tttatcgcat aaggcttcaa gctctttaaa tcttgcttta
     7741 taatcaatat tttctttatt tttatgattg atgcaagctg aacagatatt tttaccttct
     7801 ttatcttttg taaaattaat accaggtcta gtatttggca tcacgcagtg atcacaataa
     7861 atcattctcc accccttcaa tttaataaaa atattagatt gtataaaata ttaaattaat
     7921 atttgcttat tttataaaat atcacttatg tttgttttat ttttctacct aaaattcctt
     7981 tttataaggt ctttttaaag atttttggat ggtaaaaatt ttcatcatct tcttttaaat
     8041 tcttacaaat tttattacaa agttctatgc ctatagtgtc gataatattt aacaaatttc
     8101 ttttttcata aagcaaatca taaactgttt gacattcttt gaaattataa tcgtattttt
     8161 ctataatttt aaaaaatgat gcaatttcat tgaacaaaag taaatttgct aaagctcctc
     8221 gattgccttt actgcaaatg atatgaaatc ctaatttttt aagatctttc aatggggtaa
     8281 atcgttctaa attagaacca caaagttcta ttaatttgat ataaatagta ttgaaaaaat
     8341 gtataaaatc gcagtttaaa tcatccatac tcaaagaact tgaattcgaa aaactatatt
     8401 attatctcta agaatttgca tgatttcttt atgttggtaa atgtttattt ttccggcgtt
     8461 aaaattagaa aaatctattt ttctttatag aagttttatt tgtttttcaa attcgtatat
     8521 attgagcttg cttttattat aaacacctat ttcatagcct aataaataaa ataaagcact
     8581 tatttgctta cccattaaac caaagtctat gatattaatt tctttcattg ttttttcctt
     8641 gttttaatta tatttttatg aaaaataagt tgattggatg tgtagttttt gctaataata
     8701 ctacctgctt actatgcagt tatcttctaa gtttacgcaa ggcaacaggc taactctagt
     8761 agctaaaaac aattttttcc tatgcttgaa tttccattaa gtgtagcata agggcttaaa
     8821 atacttcctt ctcctacctt acaatcatga gctatgcttg aataaatatt acaaagcaca
     8881 aaatctccta tatttgaatt agcattaatg gttacaaaag gacacactat aaccccttgt
     8941 cctattttag cttcttttga aacaaaagat tgaggatgta taaaagtgat aaaattacat
     9001 gatttttttt gaaagtttta caaggatttt tttcttaaat tgatttgtcc tacacctaaa
     9061 gcaaaagatg atttttaaat caacttttta tcgaaattat cttcattgcc tagatatttt
     9121 aagtcaaaaa aattattttc ttgtatatca atatagccta taatttcgta atttgcatct
     9181 tttaaataag aataaagctc tctagcaaag ccacccgctc ctatgatgat gacatttttc
     9241 acgcacttct cctaaaagaa gaagtaaaaa aatcaaatcc ccccccccgc cgctattctc
     9301 atattttttc ttattaaatt ttttaatgct ttgaattaaa ttttgcaacg catcattcct
     9361 ttttatttgc tattctaacg ctactaggta aattaatcaa gcgtttttct aattttttag
     9421 tgtttataag ctcattgctt tgacagtttt gaaaagcttt taaactcggt aagcttttcc
     9481 atacaggacg gacgaaaata ttatttttca agcattcttc taaaaagata tttcttaaat
     9541 tttcatcttt aaaaagcaag gtattgagcc aaaaattgct tttttcattg cttttttcat
     9601 cgataaattt acatttatcg tgatttttaa aaaaatcctt gtaaatttta gcaagttctc
     9661 ttttgttttc taaaaaaagt tctaaatttt caagtcctgc aagcaagatt gctgcgttta
     9721 tattgcaaag acggtaatta taagctatcc tatcatgatc gtattcgtaa ggatggggga
     9781 ttttagctgt ggtgctaagg tgtcttgcaa gtttggctaa attttcatca tcgcttaata
     9841 tcgccccacc gcatccacct gtgatgattt tattaccatt aaagcttaaa attccacact
     9901 ttccaaaagt gcctaaggcc ttgttttcat aggtgcttcc taaggcttct gcagcatctt
     9961 caattaaaag gatgtggtat ttttcacaaa gctctttgat ggcttttata tgagcgctta
    10021 aaccaaaggt gtgcataata acacaagctt tgatgggttt gtgtgtggtt ttgttatagc
    10081 taagattatc tttttgataa gtttgatttt ctaaaaaatg ctctaaagcc ttaggactta
    10141 aacttagagt gttttcatct atatctaaaa aaacgggttt tgcacctgta taagcgatag
    10201 cattggccgt agcgacaaag cttatgcttt gagtgatgac ttcgcagttt tcatcgatac
    10261 cattagctaa taaagcgata tgaagggctg ctgtacctgt atttgtagcg atgacaaagc
    10321 gtgctttggt tttttctttt aaagcttctt caaaacgcgt tacaaattct cctacgcttg
    10381 aaacaaaacc gctatcgata cattctaaga gatatttttt ctcattgcct ataaagcaag
    10441 gctcatgtag ggcgatattt tctttattaa aaagactttt tataaaagaa atttcttttt
    10501 taaacattat aaagctcact tttataattt tctaaatttt ctttaaaata ctctatgctt
    10561 tgtctcaagc cttcttctag acttattttg ctttgccaat ttgtagcttt tttaagcttg
    10621 tttgcatcgc aacaaagtct aaaaacttcg ctatttttag gacgcaatct ttgttcatct
    10681 tggatgattt ttactttaga atctaaaatt ttttgtatga gatcaagtac ttcttgcatg
    10741 gagtattcca ctcctgagcc tatattataa acttctccaa aatgttttaa atttaaaaga
    10801 gagataaaac cctcgcaagt atctagcaca aaatttaaat cccttttagg gcttaaatct
    10861 cctagtttga tttcctttgc tccacttaaa atttgtgtga tgatggtagg tatgatagcc
    10921 cttgcgcttt gtcttggtcc ataggtgtta aaagggcgtg caatattgac atttaaatta
    10981 aaagaattat aataactcag cgccatcata tctgcagcga ttttgcttgc agaataaggg
    11041 ctttgaggtt gtaaagggtg tttttcatcg atgggcacat aaaaggccgt gccataaact
    11101 tcgcttgttg aggtgtggat aaaatgcgaa atttcgtttt ttttagctgc ttcgagcata
    11161 tttaaagtgc cattgacatt ggtatccaca tagctttgtg gggctgtgta ggagtagggg
    11221 atggcgatta aggcgccaag atgaaagatc gcatctatat ttttggtgat tttttcgcaa
    11281 aaaaaactat ctcttaaatc cccacttaca acttccatgt cttttaaaaa aggacttttt
    11341 tctaaatgtc cccaaaaatt aaaagaatta tactggctta aagctctgac tttaaaacct
    11401 tttttgacca aactttcaca aagatgagaa cctataaaac catcagcacc tgtaactaaa
    11461 atat
//
LOCUS       DAPIWB010000051        11277 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.052, whole genome shotgun sequence.
ACCESSION   DAPIWB010000051 DAPIWB010000000
VERSION     DAPIWB010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11277)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11277)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11277
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.052"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            161..472
                     /gene="rpsJ"
                     /locus_tag="RJ266_001244"
     CDS             161..472
                     /gene="rpsJ"
                     /locus_tag="RJ266_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HDV7354981.1"
                     /translation="MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKI
                     KRYTVLKSPHINKDSREQFEIRIHARMLDIVAATPDTVDSLTKLDLAPEVSVEVRAMG
                     K"
     gene            482..1057
                     /locus_tag="RJ266_001245"
     CDS             482..1057
                     /locus_tag="RJ266_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HDV7354982.1"
                     /translation="MEYIVEKIGMSRTITNPSIAVTLLRVVNAKVCEVEGGKALVAYP
                     KGKASNKCVAGQQKKYNLSAEYNRFATLEVANTEAGDLDETPLNEAKILKVSFNTKGR
                     GYSGVMKRHNFAGGPASHGSRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTVKNE
                     VVSYDAENKILVVKGAVPGYNGAMGKIRIAK"
     gene            1054..1668
                     /gene="rplD"
                     /locus_tag="RJ266_001246"
     CDS             1054..1668
                     /gene="rplD"
                     /locus_tag="RJ266_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HDV7354983.1"
                     /translation="MSKVVVLNDKLEKAGELDLPSKYAEVNPHNLYLYVKSYLASLRA
                     NTAHTKGRSDVSGGGKKPWRQKGRGGARAGSTRTNVWVGGAVAFGPTNERNYFQKVNK
                     KQKRLALERALADKAAKGVLFTADSLAIESGKTKDANAVIKKLGVKDALIVKDLLDEK
                     TLLAYRNLANCYVVDVTEVNAYLVSVFNAVIMEKSALESITKEG"
     gene            1671..1952
                     /locus_tag="RJ266_001247"
     CDS             1671..1952
                     /locus_tag="RJ266_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HDV7354984.1"
                     /translation="MADITDIKTILYTEKSLNLQEQGVVVIQTSPKMTKTGLKVVLKE
                     YFGVTPKSINSLRMDGKIKRFRGRLGQRNNYKKFYVKLPEGVSLENTEA"
     gene            1954..2784
                     /gene="rplB"
                     /locus_tag="RJ266_001248"
     CDS             1954..2784
                     /gene="rplB"
                     /locus_tag="RJ266_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012660814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HDV7354985.1"
                     /translation="MAIKTYKPYTPSRRYITGLSSEDITAKPSVRSLLVKLPAHAGRN
                     SYGRITSRHKEAGAKKLYRIIDFKRRKFGIEGKVEAIEYDPYRNCRIALIAYKDGEKR
                     YILQPRGLSVGDIVAAAESGLDIKPGNAMKLKNIPVGTIVHNVELKPGKGGQMIRSAG
                     AYAQLMGKEEKYVILRLASGEMRQVLAECMASIGEVGNEEWANVTIGKAGRNRHRGIR
                     PQTRGSAMNPVDHPHGGGEGKKNSGRHPVTPWGKPTKGAKTRRKKASDKLIISRRKGK
                     "
     gene            2786..3067
                     /gene="rpsS"
                     /locus_tag="RJ266_001249"
     CDS             2786..3067
                     /gene="rpsS"
                     /locus_tag="RJ266_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HDV7354986.1"
                     /translation="MARSLKKGPFVDDHVMKKVIAAKKANDNKPIKTWSRRSTITPDM
                     IGLTFNVHNGKSFIPVYITENHIGYKLGEFAPTRTFKGHKGSVQKKIGK"
     gene            3078..3503
                     /gene="rplV"
                     /locus_tag="RJ266_001250"
     CDS             3078..3503
                     /gene="rplV"
                     /locus_tag="RJ266_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HDV7354987.1"
                     /translation="MSKALIKFIRLSPTKARLIAREVQGMNAELAMASLKFMPNKGAK
                     YIANAISSAVANGGFEANEVIVKSCRVDAAAVLKRFRPRARGSASRIRKPTSHILVEV
                     AKAEVKSEEKKTVAKKTTTTKAPAKKTISTKKATVKKES"
     gene            3503..4204
                     /gene="rpsC"
                     /locus_tag="RJ266_001251"
     CDS             3503..4204
                     /gene="rpsC"
                     /locus_tag="RJ266_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HDV7354988.1"
                     /translation="MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLK
                     RKLYYAGISQILVERTAKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLIGKDVNIN
                     IKEERKAGASAQLAAESVATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGA
                     EMARTEWYLEGRVPLHTLRAKIDYGFAEARTTYGNIGVKVWIFKGEVLHKGMQPEKTE
                     ESAPAKKPRRTRRGK"
     gene            4207..4632
                     /gene="rplP"
                     /locus_tag="RJ266_001252"
     CDS             4207..4632
                     /gene="rplP"
                     /locus_tag="RJ266_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HDV7354989.1"
                     /translation="MLMPKRTKYRKMMKGRNRGYANRGTEFTFGEFALKATEAGRINS
                     RQIEAARIALTRFVKRQGKTWIRVFPDKPLTKKPLETRMGKGKGAVEEWVMNIKPGRI
                     IYEMAGVSEEMAREALTLAMHKLPFKTKFVTRESQNEIY"
     gene            4619..4804
                     /gene="rpmC"
                     /locus_tag="RJ266_001253"
     CDS             4619..4804
                     /gene="rpmC"
                     /locus_tag="RJ266_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HDV7354990.1"
                     /translation="MKYTEIKDKTAAELATMLKEKKVLLFTLKQKLKTMQLTNPKEIS
                     QVKKDIARINTAINALR"
     gene            4814..5065
                     /gene="rpsQ"
                     /locus_tag="RJ266_001254"
     CDS             4814..5065
                     /gene="rpsQ"
                     /locus_tag="RJ266_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HDV7354991.1"
                     /translation="MAFKREIQGVVVKIAGEKTASVLVERKVVHPRYRKIVKRFKKYL
                     IHDERNEVKVGDTVVAVECRPLSKRKSFRLKSVLATGVE"
     gene            5065..5433
                     /gene="rplN"
                     /locus_tag="RJ266_001255"
     CDS             5065..5433
                     /gene="rplN"
                     /locus_tag="RJ266_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015106543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HDV7354992.1"
                     /translation="MIQSFTRLAVADNSGAKELMCIKVLGGSKRRYATVGDVIVASVK
                     KALPNGKVKKGQVVKAVIVRTKKEIHRDNGSLIRFDENAAVILDNKREPIGTRIFGPV
                     GREVRYGGFMKIVSLAPEVL"
     gene            5433..5666
                     /locus_tag="RJ266_001256"
     CDS             5433..5666
                     /locus_tag="RJ266_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HDV7354993.1"
                     /translation="MAVKLKIKKGDSVKVITGDDKGKTGKVLAVYPKTLKVVVEGCKI
                     AKKAIKPSEKNPNGGFINKEMPMDISNVAKVQE"
     gene            5670..6215
                     /gene="rplE"
                     /locus_tag="RJ266_001257"
     CDS             5670..6215
                     /gene="rplE"
                     /locus_tag="RJ266_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HDV7354994.1"
                     /translation="MMRLKEKYNQSIKPALVKEFDIKNPMLIPVIEKVVISVGAGELA
                     KDQKVLQNVADTISLIAGQKAVITKAKKSVAGFKVREGFPVGVMVTLRKENMYAFLDK
                     LISIALPRVKDFRGLSRDGFDGRGNYNFGLDEQLMFPEVEYDKILRTHGMNISIVTTA
                     QNDKQAQKLLELIGVPFTKGK"
     gene            6217..6402
                     /locus_tag="RJ266_001258"
     CDS             6217..6402
                     /locus_tag="RJ266_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001085694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HDV7354995.1"
                     /translation="MAKKSMIAKAARKPKFKVRAYTRCQICGRPHSVYRDFGICRVCL
                     RKMGNEGLIPGLKKASW"
     gene            6412..6807
                     /gene="rpsH"
                     /locus_tag="RJ266_001259"
     CDS             6412..6807
                     /gene="rpsH"
                     /locus_tag="RJ266_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HDV7354996.1"
                     /translation="MINDIISDSLTRIRNAGMRKLETTKLLHSKVVEALVGIFQAKGY
                     IESFNVIEEDKKKFINVVLKYDEKGKSVINELKRISKPGRRVYKGKDEIKHFKNGYGT
                     IVVSTSHGVLANDEAYKAGVGGEILCTIW"
     gene            6886..7422
                     /gene="rplF"
                     /locus_tag="RJ266_001260"
     CDS             6886..7422
                     /gene="rplF"
                     /locus_tag="RJ266_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HDV7354997.1"
                     /translation="MSRIGKQPIAIPAGVEVKLEGNLLKFKKGNLAKELDTKANVNVE
                     IKDNNILFSPKGEDRQSRAYWGTYRALAYNIVVGLTQGFSKTLEINGVGYKAALKGKV
                     LELSLGFSHPINYDIPEGIEIVVDKNTIAVKGSDKQVVGQVAAQIREFRPPEPYKGKG
                     VKYSDERIIRKAGKTSKK"
     gene            7432..7788
                     /locus_tag="RJ266_001261"
     CDS             7432..7788
                     /locus_tag="RJ266_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HDV7354998.1"
                     /translation="MRANVLKRKLTLRIKRKKRIRAKISGCENFPRISVFKSNRTLYI
                     QAIDDVKAVTLAAVDGRKLGVKANKEGAKKIAAEFAKTLKAKKIEQAVFDRNGYVYHG
                     VIAALAESLRENGIRL"
     gene            7800..8243
                     /gene="rpsE"
                     /locus_tag="RJ266_001262"
     CDS             7800..8243
                     /gene="rpsE"
                     /locus_tag="RJ266_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HDV7354999.1"
                     /translation="MEKYNREEFEEVIVDIGRVTKVVKGGRRFRFTALVIVGNRKGLV
                     GVGYGKAKEVPDAIRKAVDDAFKNIVEVKTKGSTIAHDVEVKYNASRILLKPASEGTG
                     VIAGGSTRPIVELAGIKDILTKSLGSNNSANVVRATIKALTMLKG"
     gene            8248..8640
                     /locus_tag="RJ266_001263"
     CDS             8248..8640
                     /locus_tag="RJ266_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HDV7355000.1"
                     /translation="MNLTKAAGSTHKTKRIGRGQGSGMGKTATKGGKGQTARKGYNEK
                     RGFEGGQQPLQRRLPKVGFTSKIQKPYVINVEKITAVKELSEITFESIKSVHKISKSV
                     NKIKLIGASAKDLVSKIKDENISVTGSK"
     gene            8640..9905
                     /gene="secY"
                     /locus_tag="RJ266_001264"
     CDS             8640..9905
                     /gene="secY"
                     /locus_tag="RJ266_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HDV7355001.1"
                     /translation="MNRALTNKILITLAFLFAYRVLAYVPVPGVNADVIAEFFNNNQN
                     NALGLFNVFSGGAAERFSIISLGIMPYITASIIMELLAATFPNIGKMKKERDSMQKYM
                     QIIRYATIVITLVQSIGVAIGLQSLHGRGGAGAIMVEDLNMFIALCAISMLAGTMLLM
                     WLGEQITQRGIGNGISLIIFAGIVSGIPRAISGTVGQINSGEMNFLTAFAIFALILIT
                     IGVIIYIELGERRIPISYSRKVVMQNQNKRIMNYIPIKLNLSGVIPPIFASAILMFPT
                     TILQTSTNPYLQAINDFLNPNGYLFHVLTFLFVIFFAYFYASIVFNAKDIAENLKKQG
                     GFIPGIRPGEGTSSYLNEVASRLTLSGSIYLGLVATLPWVLVKFMGVPFHFGGTSVLI
                     VVQVALDTMRKIEAQIYMSKYQTLSAVGL"
     gene            complement(9933..11204)
                     /locus_tag="RJ266_001265"
     CDS             complement(9933..11204)
                     /locus_tag="RJ266_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7355002.1"
                     /translation="MNDKTYKFHPNDTKMDKKIIQITEKSGFKAAVFSMAAMTMLGSV
                     VISSALPAINRHFEELLTQSGATLASSFTLAHLDILVRLVLTIPAIFVVILSPFAGIL
                     MDKFGKLKFILPAMVVWTLSGISGFFLNDIYAILTSRAIFGMATAFIMTGASALLGDY
                     YSRGGFNRRENALSLQGFFCAVGGAVFISIAGFVSSYSWRYPFLVYGLGILITLMAII
                     YLFEPRKFKFYNHTKIETKTNYWQFFPIYFIGFFIMVVYYISPTQLPYYIEEHLGLDP
                     KYIGISMSVSALCYGFFSLSYRYIIKFLSIKTIYVLTLFIVSCSFLLLFLVDSFFTVL
                     IALALLGMGGGIMLVNNTAYLFSICPENARSRAYGILASCIFLGQFLSPIISQPIVRQ
                     MGLVDAFLIWSIVIFIVCIVFLFLKQKPRIN"
BASE COUNT         4218 a         1564 c         2267 g         3228 t
ORIGIN      
        1 ttaaattcta aaaattctat ttttatcctt tttaaaagga aaataataga aaaatttcat
       61 caaattcctt gactttgaaa acaagatttt atatactctc atttcaattt ttataaattg
      121 gttagttttt aactaacgag ttctttttaa aggaaatatt atggaaagaa ttaggcttaa
      181 gctaaaagct tatgaccatc gagtactaga cagaacagtt gcagcaatcg tagaagctgt
      241 taaaagaaca ggtgcggata tcagaggtcc gataccaatg cctactaaaa tcaaacgcta
      301 tacagtttta aaatctccac acattaacaa agattctcgt gagcagtttg aaataagaat
      361 tcacgcgcgt atgctagata tagtagcagc gactccagat acagttgatt ctttaactaa
      421 gcttgattta gcgccagaag taagcgttga agtaagagct atgggtaagt aaggataaga
      481 tatggaatat attgtagaaa aaattggaat gagcagaaca attactaatc caagtatcgc
      541 tgtaacttta ctaagagttg taaatgcaaa agtatgtgaa gttgaaggcg gaaaggcttt
      601 agtagcatat ccaaaaggta aagcaagtaa taaatgtgtc gcaggacaac aaaaaaaata
      661 caatctttct gcagaataca atagatttgc gactttagaa gtagcaaata ctgaagcagg
      721 agatttagat gaaactccat taaatgaagc aaaaatttta aaagtaagct ttaacactaa
      781 aggtagaggt tatagcggtg ttatgaagag acataacttc gcagggggtc cagcaagtca
      841 cggttctaga tttcacagac gccatggatc tattggtaat agagaatggc caggtcgtgt
      901 tcaaccaggt atgaaaatgg caggacacta tggaaatact aaagtgaccg ttaaaaacga
      961 agttgtatct tatgatgctg aaaataaaat tttagtagtt aaaggtgcag taccaggtta
     1021 taatggtgct atgggtaaaa taaggattgc aaaatgagta aagtagttgt tttaaatgat
     1081 aaattagaaa aagcaggtga acttgattta ccttcaaaat atgcggaagt aaatccacac
     1141 aatctttact tgtatgtaaa atcttacctt gcaagtttaa gagcaaatac agctcatact
     1201 aaaggtagaa gtgatgtaag tggtggtggt aaaaaacctt ggagacaaaa aggtcgtggc
     1261 ggtgctagag cgggttcaac aagaactaac gtttgggtag gcggtgcggt tgcttttggt
     1321 ccaacaaatg aaagaaacta cttccaaaaa gtaaataaaa aacaaaaaag attggcgctt
     1381 gaaagagctt tagcagataa agcagctaaa ggtgtgttat ttactgctga ttctttggct
     1441 attgaaagtg gtaaaacaaa agatgcaaac gctgtgatta aaaaacttgg cgtcaaagat
     1501 gctttaatcg ttaaagattt actagatgaa aaaacacttt tagcttacag aaatttagca
     1561 aattgctatg tagttgatgt aactgaagta aatgcttatt tagtgtctgt atttaatgct
     1621 gttattatgg aaaaatcagc gttagaatct attacaaaag agggataatt atggcagata
     1681 ttactgatat aaagactata ctttacacag aaaaaagttt gaatttgcaa gagcaaggtg
     1741 tcgtagttat tcaaacttcg ccaaaaatga ctaaaacagg cttaaaagtg gttttaaaag
     1801 agtattttgg tgtaactcca aaaagcatca attccttaag aatggatgga aaaattaagc
     1861 gttttagagg tcgtttaggt caaagaaaca attacaaaaa attctatgtt aagctacctg
     1921 aaggtgttag cttagaaaat acggaggctt aagatggcaa ttaaaactta taaaccatat
     1981 actccaagta gaagatatat cacaggttta agttctgaag atattacagc taaaccaagt
     2041 gtacgctcac tacttgttaa acttccagca cacgcgggtc gtaacagcta tggaagaatt
     2101 acaagtcgtc ataaagaagc gggtgctaaa aaactttaca gaattattga ttttaaacgt
     2161 cgtaaattcg gtatagaagg caaagtagaa gcaatcgagt atgatccata cagaaattgt
     2221 agaattgctt tgattgctta taaagatggg gaaaaaagat atattcttca accacgtgga
     2281 ttaagcgttg gtgatatcgt tgcagctgct gaaagcggac ttgatattaa accaggtaat
     2341 gcaatgaaac ttaaaaacat tcctgtgggt actattgttc ataatgttga gttaaaacca
     2401 ggtaaaggcg gtcaaatgat tcgttctgcg ggtgcttatg cacaacttat gggtaaagaa
     2461 gaaaaatatg ttattttaag acttgcaagt ggcgaaatga gacaagtttt agctgaatgt
     2521 atggcaagta tcggcgaagt tggaaatgaa gaatgggcta atgtaactat cggtaaagca
     2581 ggtagaaatc gccatagagg tatccgcccg caaactcgtg gttctgcaat gaacccagta
     2641 gatcacccgc acggtggagg tgaaggtaag aaaaattcag gccgtcatcc agtaactccg
     2701 tggggtaaac caaccaaagg tgcgaaaact cgtcgtaaaa aggctagcga taagctaata
     2761 atttcaagaa gaaaaggaaa gtaagatggc tagatcacta aaaaaaggtc cttttgttga
     2821 tgatcatgta atgaaaaaag tcatcgctgc taaaaaggct aatgataata aaccaattaa
     2881 aacttggtca agaagaagca caattactcc tgatatgata ggacttacat ttaatgttca
     2941 taatggcaaa agcttcattc cggtttatat tactgaaaat cacatcggtt ataaacttgg
     3001 tgaatttgct ccaacacgca catttaaagg gcataaaggc tctgtgcaaa agaaaattgg
     3061 taagtaaggg ataagatatg agtaaagcat taattaaatt cataagatta tctccaacta
     3121 aagcaagatt gattgctaga gaagttcagg ggatgaatgc agaattagct atggctagtt
     3181 taaaatttat gccaaataaa ggtgcaaaat acattgcaaa cgcaatttca agcgcagtag
     3241 caaatggtgg ctttgaagca aacgaagtga ttgtaaaaag ttgtcgtgtt gacgcagctg
     3301 cggtattaaa aagatttaga ccaagagcta gaggaagtgc aagtcgtatt agaaaaccaa
     3361 cttcacatat tttagtagaa gtggcaaaag cggaagtgaa atctgaagag aaaaaaacag
     3421 tagctaaaaa aactactaca acaaaagctc cagctaaaaa aacaataagc actaaaaaag
     3481 caacagtgaa aaaggaaagc taatgggaca aaaagttaat ccaattggtc taagactagg
     3541 aatcaataga aactgggaat caagatggtt tccaactaaa gcaaatttag tagaaaatat
     3601 cggtgaagat tacaaaatca gagctttctt aaaaagaaaa ctttattacg caggaattag
     3661 ccaaatttta gtagaaagaa ctgctaaaaa acttcgcgtt actgtagttg ctgcaagacc
     3721 aggtatcatc atcggtaaaa aaggtagtga tgttgataat ttaagaaaag aattgcaaga
     3781 tttaatcggt aaagatgtaa atatcaatat caaagaagaa agaaaagcag gagcttcagc
     3841 tcaacttgct gctgaaagtg ttgcaactca acttgaaaaa agaattgctt ttagaagagc
     3901 aatgaaaaaa gtaatccaag gtgcgcaaaa agcaggtgct aaaggaatta aagtttcagt
     3961 ttccggtcgt ttaggcggtg ctgaaatggc aagaacagaa tggtatcttg aaggacgcgt
     4021 tccacttcat actttaagag caaaaatcga ttatggtttt gcagaagcta gaactactta
     4081 tggaaacata ggagttaaag tatggatctt taaaggtgaa gtattgcaca aaggtatgca
     4141 acctgaaaaa actgaagaaa gtgctccagc taaaaagcca agacgcacaa gaaggggtaa
     4201 ataatcatgt taatgccaaa aagaactaaa tatcgcaaaa tgatgaaagg gcgtaacaga
     4261 ggttatgcta atcgtggaac agaatttact tttggtgaat ttgcattaaa agcaactgaa
     4321 gcaggacgca ttaactcacg ccaaatcgaa gcagcgcgta tcgctttaac tcgttttgtt
     4381 aaaagacaag gaaaaacttg gattagagtt tttccagata agcctttgac aaaaaaacct
     4441 ttagaaactc gtatgggtaa aggtaaaggt gctgttgagg aatgggtaat gaatatcaag
     4501 ccaggtcgta tcatttatga aatggcagga gtaagcgaag aaatggcaag agaagcattg
     4561 actttagcta tgcataaact tccatttaaa actaagtttg ttacaagaga gagccaaaat
     4621 gaaatatact gagattaaag ataaaacagc agctgagctt gcaacaatgc taaaagaaaa
     4681 aaaggtgctt ttattcactt taaaacaaaa gctaaaaaca atgcaactta ctaatccaaa
     4741 agagattagc caagtaaaaa aagacattgc tagaataaat acagcaatta acgctttaag
     4801 ataaggatag aaaatggcat ttaaaagaga aattcaaggc gttgttgtta aaatcgctgg
     4861 tgaaaaaacc gcaagtgttt tggttgaaag aaaagtggtt catccaagat atagaaaaat
     4921 tgttaaacgc tttaaaaaat atctaattca tgatgagaga aatgaagtta aagtgggtga
     4981 tactgttgtt gcagtagaat gcagaccact ttcaaaaaga aaatcatttc gcttaaaatc
     5041 tgtattagct acaggagttg agtaatgatt caaagtttta caagacttgc agttgctgat
     5101 aatagcggtg caaaagaatt aatgtgtatc aaggttttag ggggtagcaa aagaagatac
     5161 gctaccgtag gtgatgtaat cgttgcatct gttaaaaaag ctttaccaaa tggaaaagtt
     5221 aaaaaaggtc aagtggtaaa agcggttatc gttagaacta aaaaagaaat tcatagagat
     5281 aatggttctt tgattcgttt tgatgaaaat gctgcggtta ttcttgacaa caaaagagag
     5341 cctatcggaa ctcgtatctt tgggccagtg ggcagagaag ttagatatgg tggctttatg
     5401 aaaatcgttt cactagcacc ggaggtatta taatggcggt taaattaaaa atcaaaaaag
     5461 gtgatagcgt taaggttatc acaggtgatg ataaaggtaa aacaggtaaa gttttagcgg
     5521 tatatccaaa aacacttaaa gtggtagttg aaggatgtaa aatcgctaaa aaagctatta
     5581 agccgagtga gaaaaaccca aatggtggtt ttatcaataa agaaatgcca atggatattt
     5641 ccaatgtggc aaaagttcag gagtaagcga tgatgagatt aaaagaaaaa tataatcaaa
     5701 gcattaaacc tgcattggtt aaagaatttg atattaaaaa tcctatgctt atccctgtga
     5761 tcgaaaaagt agttatcagc gtaggtgctg gtgagttggc taaagatcaa aaagtattgc
     5821 aaaatgttgc agatactatt tctttaattg caggacaaaa ggctgtgatt actaaagcta
     5881 aaaaatcagt tgcaggattt aaagttcgcg aaggttttcc tgtgggtgta atggtaactt
     5941 taagaaaaga aaatatgtat gcttttcttg ataaattaat ttctattgct ttgccaaggg
     6001 tgaaagactt tagaggttta agtagagatg gttttgatgg acgcggaaac tataacttcg
     6061 gtcttgatga gcagttgatg ttcccagaag tggagtatga taaaatttta agaactcatg
     6121 gtatgaacat ttctatagtt acaacagcac aaaatgacaa acaggcacaa aagttattag
     6181 aacttatcgg tgtgccattt acaaaaggaa agtaagatgg ctaaaaaatc aatgattgca
     6241 aaagcggcac gcaagcctaa atttaaagtt agagcttata caagatgcca aatttgtggg
     6301 cgtccgcatt cggtttatag agattttgga atttgcagag tttgcttaag aaaaatgggc
     6361 aacgaaggtt tgattccagg tcttaagaaa gcaagttggt aaggataaaa tatgataaat
     6421 gatattattt cagattcact cactcgtatc agaaatgcag gaatgagaaa gcttgaaaca
     6481 accaagcttt tacattctaa agttgtagaa gctttagttg gaatttttca agctaagggc
     6541 tatattgaga gttttaatgt tattgaagaa gataaaaaga aatttatcaa tgtagtttta
     6601 aaatacgatg aaaaaggtaa gagtgttatc aatgagctta aaagaatttc taagcctggt
     6661 cgtcgtgttt ataaaggtaa agatgaaatc aagcatttta aaaatggtta tggtactatc
     6721 gtagttagca caagtcatgg tgttttagct aatgatgaag cttataaagc aggtgttggc
     6781 ggcgaaattt tatgtaccat ttggtaaaaa atctgctttt tatggcattg ggtatccatt
     6841 cttttaaaaa agtagaaata tcctagacaa ataaaaagga aaaatatgtc tcgtataggt
     6901 aaacaaccga ttgctattcc agcaggagta gaagtaaaat tagaaggaaa tttgcttaaa
     6961 tttaaaaaag gaaatttagc aaaagaactt gatactaaag caaatgtaaa tgttgagatt
     7021 aaagataata atattctttt ttctccaaaa ggtgaagaca gacaaagtag agcttattgg
     7081 ggaacttaca gagctttagc ttacaatatt gttgtaggtt taactcaagg tttttcaaaa
     7141 actcttgaaa tcaatggagt tggttataaa gcagctttaa aaggtaaagt tttagaacta
     7201 agccttggtt tttctcatcc tattaattat gatattccag aaggaattga aattgtagtg
     7261 gataaaaata ctattgcagt taaaggaagt gataaacaag ttgtaggtca agttgctgct
     7321 caaattcgtg aatttagacc accagaacca tataaaggaa aaggcgttaa gtattctgat
     7381 gaacgcatta tccgcaaagc tggtaagaca tctaagaagt aagggtagaa tatgagagca
     7441 aatgtattaa aaagaaaact aactttaaga atcaaaagaa aaaaaagaat tagagcgaaa
     7501 atttcaggtt gtgaaaattt tccaagaatt tctgtattta aatcgaacag aactctatat
     7561 atccaagcga ttgatgatgt aaaagctgta actttagcag cagttgatgg acgcaaactt
     7621 ggcgttaaag caaataaaga aggtgctaaa aaaatcgctg ctgaatttgc taaaacttta
     7681 aaagctaaaa agatagaaca agctgttttt gatagaaatg gttatgtata tcatggtgtt
     7741 atcgcagcat tggctgaatc tttaagagaa aatggcatta ggctataagg ggtaaatcga
     7801 tggaaaaata taatagagaa gaatttgaag aagtaatcgt cgatatcggc agagttacta
     7861 aggttgttaa aggtggtaga agatttagat ttactgcttt agttatcgtt ggaaaccgca
     7921 aaggtttagt aggtgttggt tatggtaaag ctaaggaagt tccagatgct atccgtaaag
     7981 ctgttgacga tgcgtttaaa aatatcgttg aagttaaaac taaaggctca actatcgctc
     8041 acgatgtaga ggtaaaatat aacgcaagta gaattttgct taaaccagct agtgaaggta
     8101 caggagttat cgcaggtggt tctacacgcc ctatcgtgga acttgcaggt attaaagaca
     8161 tcttaaccaa gtctttgggt tcaaataatt cagctaatgt ggttcgtgct acaatcaaag
     8221 ctttaacaat gttaaaagga taagaagatg aatttaacaa aagcagcggg ttcaacgcat
     8281 aaaactaaaa gaattggccg tggtcaaggt tctggcatgg gtaagactgc tactaaaggg
     8341 ggtaaaggtc aaactgctag aaaaggttat aatgaaaaaa gaggttttga agggggtcaa
     8401 caaccacttc aaagaagact accaaaagta ggttttactt ctaaaattca aaaaccttat
     8461 gtgatcaatg ttgaaaaaat cacagctgta aaagagctta gtgaaattac atttgagagc
     8521 attaaaagtg ttcacaaaat ttcaaaatct gtgaataaaa tcaaattaat tggtgcaagt
     8581 gcaaaagact tagtatcaaa aattaaagac gagaatatta gcgtcaccgg atcaaaataa
     8641 tgaatagagc attgacgaat aagattttaa tcaccttagc atttttattt gcttataggg
     8701 ttctggctta tgtgccagtt cctggcgtca atgctgatgt gattgcggaa ttttttaata
     8761 acaatcaaaa caatgctttg ggtttattta atgtttttag tggtggagcg gctgaacgct
     8821 tttctatcat ttctttaggt attatgcctt atattactgc ttctattatt atggagcttc
     8881 ttgcagcaac ttttccaaat attggtaaga tgaaaaaaga gcgtgatagt atgcaaaaat
     8941 atatgcaaat tatccgttat gcgactattg tgattacttt ggttcaaagt ataggcgttg
     9001 ctataggttt gcaaagcttg cacggtcgtg gtggtgcagg ggctataatg gtggaagatt
     9061 taaatatgtt tatcgcactt tgtgctattt ctatgcttgc tggaactatg cttttaatgt
     9121 ggcttggcga acaaatcaca caaagaggta taggaaatgg tatttcttta atcatttttg
     9181 caggtattgt ttcaggtatt ccaagagcga tttcaggaac tgtaggacaa atcaattcag
     9241 gcgagatgaa tttcttaacc gcttttgcaa tttttgcttt gattttaatc accatagggg
     9301 tgattattta tatagaactt ggagaaagaa gaattcctat ttcttattct cgtaaagttg
     9361 taatgcaaaa tcaaaacaaa cgcattatga attatattcc tattaaactc aatcttagtg
     9421 gggttattcc accgattttt gctagtgcga ttttgatgtt tccaacaaca attttacaaa
     9481 ctagtacaaa tccttatcta caagccatta atgacttttt aaatccaaat ggttatttgt
     9541 ttcatgttct aactttcttg tttgtaattt tctttgctta tttttatgct tctatcgtat
     9601 ttaacgctaa agacatagca gaaaatttga aaaaacaagg cggttttatc cctggaattc
     9661 gtccaggtga aggaacttca agttatctta acgaagtggc ttctcgttta actttatcag
     9721 gttctattta tttagggctt gttgcaacct taccttgggt tttggtgaaa tttatgggtg
     9781 tgccttttca ttttggcggc acttctgtac ttattgtagt tcaagtagca cttgatacga
     9841 tgagaaaaat tgaagctcaa atttatatga gtaaatacca aactttaagt gcggtaggtt
     9901 tgtaataaat aaaattagca agatttttct tgctaattta ttctaggttt ttgctttaaa
     9961 aataaaaaca caatgcacac tataaaaatt actattgacc atattaaaaa agcatctaca
    10021 agacccattt gtctaacgat aggttgagag ataataggac ttaaaaattg tcctaaaaat
    10081 atacaacttg ctaaaattcc ataagcccta gagcgagcat tttcaggaca gattgaaaaa
    10141 agataagccg tattatttac aagcataata cctccaccca ttccaagcaa agctaaggcg
    10201 attaaaactg tgaaaaagct atctactaaa aaaagcagca aaaaagaaca agatacgata
    10261 aaaagagtta aaacataaat agttttaata cttaagaatt ttataatata tctatagctt
    10321 agagagaaaa aaccataaca tagtgcagat acagacatcg aaatacctat atatttagga
    10381 tccaatccca aatgttcttc tatatagtaa ggaagttgag ttggtgaaat ataataaact
    10441 accatgataa aaaaacctat aaaatagata gggaaaaatt gccaataatt tgtttttgtt
    10501 tctatttttg tatgattata gaatttaaat tttctaggtt caaaaagata aatgatagcc
    10561 attaaggtaa ttaaaattcc aagtccatat accaaaaaag gataacgcca agaataactt
    10621 gaaacaaatc ccgcaataga aataaaaaca gcacccccta ctgcacaaaa aaatccttga
    10681 agacttaaag cattttctct gcgattaaag ccaccacgac tataataatc cccaagcaaa
    10741 gccgaagcgc ctgtcattat aaaagcagtt gccataccaa aaatagctct tgaagtcagt
    10801 atagcataaa tatcatttaa gaaaaagcca cttatcccag aaagagtcca aaccaccata
    10861 gctggaagaa tgaattttaa tttgccaaat ttatccatta aaataccagc aaatggagat
    10921 aaaatgacaa caaaaatagc agggatggtt aaaactaagc gaacaagtat atcaagatga
    10981 gctaatgtga aacttgaagc aagagtagcg ccactttggg ttaaaagttc ttcaaaatgt
    11041 ctgttgatag caggcagagc agatgaaatg accacacttc ctagcatagt catagcagcc
    11101 atagaaaaca cagctgcttt aaatccggac ttttcagtaa tttgaattat ttttttatcc
    11161 atttttgtgt catttggatg aaatttataa gttttgtcat tcataatttt tacctttttt
    11221 attttattat actccaaaaa ttatggtttg tatttaaaat tacttaaaat tatattt
//
LOCUS       DAPIWB010000052        10969 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.053, whole genome shotgun sequence.
ACCESSION   DAPIWB010000052 DAPIWB010000000
VERSION     DAPIWB010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10969)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10969)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10969
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.053"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(20..676)
                     /locus_tag="RJ266_001266"
     CDS             complement(20..676)
                     /locus_tag="RJ266_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HDV7355003.1"
                     /translation="MSKIDEISSKSKANILEHLKKAYKETTFTRIESIDPVEHIQTTQ
                     DMLTEMKQKMSDNKYIVENATKDTLEEKINEIVAKYGFKSMIYGADLNLNLEQIKAEK
                     KICFDKEIENLRSEVFHSDFSIIHARAGVSSHGVALIPSSKTQPRMLSLAPKLCIVLL
                     KKENVVKSLSEALNLVKKENEILPTNILFIAGPSRTADIELITVFGVHGPQIAHIIIY
                     "
     gene            complement(669..2108)
                     /locus_tag="RJ266_001267"
     CDS             complement(669..2108)
                     /locus_tag="RJ266_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HDV7355004.1"
                     /translation="MSQKIPHEQIVQIKLNDKQMQENLMTAMHTLQKNRLNVIDARFK
                     DWQGLRAKAKQAKNNALMSLEERLLEFEKNATKNGIKVHWASSDEDACEIVYEIMKEK
                     NITKLLKGKSMASEEIGLNHYLEKKGLKAIETDLGELILQLNEEPPLHIVVPAIHRNR
                     HEIGEIFKEKLGANLENDEPESLNAVAREHLRKDFEGLKLGLSGVNFAMSREGAFWLI
                     ENEGNGRMCTTAPDIHIALCGIEKVMESFEDAATMVSLLTPSATGQFIPTYNNIITGP
                     RKNGDLDGPKEVHVILFDHNRSKMLAHEDYYEALRCIRCGACMNFCPVYDQIGGHAYQ
                     TTYPGPIGEVISPNIFGIDHTGDILNFCSLCGRCSEVCPVQIPLADLIRKLRCDKIGQ
                     GKNPPLGANNVHHNALEAFAFKQFKNIATNGDKWRFSLSKAHYFNWTVQNFASILPVI
                     KKWYAFKELPQIKMDLYKEVQKLEGVSYE"
     gene            complement(2105..2845)
                     /locus_tag="RJ266_001268"
     CDS             complement(2105..2845)
                     /locus_tag="RJ266_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HDV7355005.1"
                     /translation="MMKKVYFYATCLGSAAMQQSVLNAIKLLRREGIEVIFKKNQTCC
                     AQPSFNSGYFDESREIALYNVDLFDKDYPIVVPSGSCAGMMSHDYKELFKNRPEFSKI
                     KTFSSRVIELSQYLDEVLKVDYEDKGAPIKVTWHSNCHALRVQKSIQASKNLIKKLKN
                     VELVELQYEEECCGFGGTFSVKEPEISNAMVRSKIKDIQNSGAKYLISGDGGCLLNID
                     GTMKRMGLDIKGIHLYDFLLKRLEGERL"
     gene            complement(2969..4651)
                     /locus_tag="RJ266_001269"
     CDS             complement(2969..4651)
                     /locus_tag="RJ266_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HDV7355006.1"
                     /translation="MEQILTWQQIYDPFSNIWLSALVAFLPILCFLVCLVVLKLKGYQ
                     AGFLTVILATLVALFAYKMPWNLVGASFIQGFTNGMWPIAWIIIAAIFLYKLSIKSGS
                     FEIIKKSVMSITPDHRIQVILIGFCFGSFLEGAIGFGGPVAITAALLVGLGLRPLQAA
                     GLCLIANTAPVAFGAVGIPIIAMANLVGIEQHSVSAMVGRMLVPLSLTIPFFIVFLMD
                     GFKGIKETFPAILVAALSFTTTQFLSSNHLGAELPDIISAVVSLAVTTVFLKFWKPKN
                     IFRFDNESNFTQDNTLSFNQILKAWSPFILLIVCIIIWTQPWFKALFDKDGILSYTSI
                     TLQFSNITTGILSPSITGIGEAKPLSLALGVDLINGKTVAQAGTAILLAAFLTIAILK
                     IKAEDAAECFWVTLKEMAIPCITIGLVVAFAFISKNSGMSTTLGLAFAHTGDAFSFFS
                     PIIGWIGVFLTGSDTSANLLFGTLQQVSAQKLGISEALFLAANSVGGVVGKMISPQSI
                     AIACAAVGLVGKESDLFKFTLKYSVAFIILIGIWTCIIAFFLQGIIPEVIVK"
     gene            complement(4823..5392)
                     /gene="cdtC"
                     /locus_tag="RJ266_001270"
     CDS             complement(4823..5392)
                     /gene="cdtC"
                     /locus_tag="RJ266_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit Cj-CdtC"
                     /protein_id="HDV7355007.1"
                     /translation="MKKIITLFFMFITLAFATPTGDLKDFTEMVSIRSLETGIFLSAF
                     RDTSKDPIDQNWNIKEIVLSDELKQKDKLADELPFGYVQFTNPKESDLCLAILEDGTF
                     GAKSCQDDLKDGKLETVFSIMPTTTSAVQIRSLVLESDECIVTFFNPNIPIQKRFGIA
                     PCTLDPIFFAEVNELMIITPPLTAATPLE"
     gene            complement(5403..6200)
                     /gene="cdtB"
                     /locus_tag="RJ266_001271"
     CDS             complement(5403..6200)
                     /gene="cdtB"
                     /locus_tag="RJ266_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin nuclease subunit
                     Cj-CdtB"
                     /protein_id="HDV7355008.1"
                     /translation="MKKIICLFLSFNLAFANLENFNVGTWNLQGSSAATESKWSVSVR
                     QLVSGANPLDILMIQEAGTLPRTATPTGRHVQQGGTPIDEYEWNLGTLSRPDRVFIYY
                     SRVDVGANRVNLAIVSRMQAEEVIVLPPPTTVSRPIIGIRNGNDAFFNIHALANGGTD
                     VGAIITAVDAHFANMPQVNWMIAGDFNRDPSTITSTVDRELANRIRVVFPTSATQASG
                     GTLDYAITGNSNRQQTYTPPLLAAILMLASLRSHIVSDHFPVNFRKF"
     gene            complement(6197..7003)
                     /gene="cdtA"
                     /locus_tag="RJ266_001272"
     CDS             complement(6197..7003)
                     /gene="cdtA"
                     /locus_tag="RJ266_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit Cj-CdtA"
                     /protein_id="HDV7355009.1"
                     /translation="MQKIIVFILCCFMTFFLYACSSKFENVNPLGRSFGEFEDTDPLK
                     LGLEPTFPTNQEIPSLISGADLVPITPITPPLTRTSNSANNNAVNGINPRFKDEAFND
                     VLIFENRPAVSDFLTILGPSGAALTVWALAQGNWIWGYTLIDSKGFGDARVWQLLLYP
                     NDFAMIKNAKTNTCLNAYGNGIIHYPCDASNHAQMWKLIPMSNTAVQIKNLGNGKCIQ
                     APITNLYGDFHKVFKIFTVECAKKDNFDQQWFLTTPPFTAKPLYRQGEVR"
     gene            7116..7349
                     /locus_tag="RJ266_001273"
     CDS             7116..7349
                     /locus_tag="RJ266_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002928786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4492 domain-containing protein"
                     /protein_id="HDV7355010.1"
                     /translation="MYLKHLYFNISQIFNFYKEGFKNLTLGKTLWKIIFIKLFVMFVI
                     LKLFVFDVNFNSIFKSDKEKSTFVLKNLTLEGK"
     gene            7350..8912
                     /locus_tag="RJ266_001274"
     CDS             7350..8912
                     /locus_tag="RJ266_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HDV7355011.1"
                     /translation="MNELSSVDWSRAQFALTALYHFLFVPLTLGLSFMIAIMETIYVK
                     TKNERWKKITKFWLSLFAINFAIGVATGIIMEFEFGTNWANYSWFVGDIFGAPLAVEG
                     IMAFFLEATFFAVMFFGWDKVSKGFHLLSTWCVAIGSNLSAFWILVANGWMQYPVGMS
                     FNPDTARNEMQSFFEVALSPVAISKFLHTIGSGYVISALFVMGISAWFMLKGRHIIEA
                     KKSLVVGASFGLVCSIFLFFSGDESAYRVTQTQPMKLAAMEGVYQGEHRAGLVPFGIL
                     NPKKTIDNNESVFLFDITIPYALSILGNRDPNSFVPGIEDLIYGNESKGIEPMQNRID
                     RGKIAIQALKDYKLAKESNDTIAMANHKFILETHFKDFGYGYLEKPSDTIPPVALTFY
                     SFHIMVALGSFFFLLFIVTLYLTMANDIEKFRKVLWVCLLSIPLGYIAAEAGWIVAEV
                     GRQPWAIQDLLPVHIAATQLGKVNVQISFWIFAVLFTALLIAEVKIMLTQIKKGFDAH
                     AGHTPLMGKGEK"
     gene            8912..10036
                     /gene="cydB"
                     /locus_tag="RJ266_001275"
     CDS             8912..10036
                     /gene="cydB"
                     /locus_tag="RJ266_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HDV7355012.1"
                     /translation="MFFGLELEGLQIYWWLILSLLGGLLVFMFFVQGGQTLIDELSKD
                     ELEKTMLVNSLGRKWELGFTTLVLFGGAAFAAFPLFYSTSFGGAYWAWLCILFCFILQ
                     AVAYEYRKKENNVYGSKTYEIFLKINGYLGVFLIGVAVSSFFSGSEFILNEHNFVSWQ
                     NPLHGLELLLNPFNYLLGLALVFLARLLGAAYFINNINDENIKIRAMKKLMINSILFL
                     PFFLGFLVWIFLKDGFSVDANGVVSMSANLYLYNFLNQMIFAVLLAIGVILVLLGMFQ
                     GAKGCSKAIFTLGLGTVLTVFALLSSIGLGQSAFYPSLSDLQSSLTLKNASSSYYTLS
                     VMAYVSLLVPFVLAYIIYVWNAMDKVKITREEIANDDHAY"
     gene            complement(10230..10925)
                     /locus_tag="RJ266_001276"
     CDS             complement(10230..10925)
                     /locus_tag="RJ266_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HDV7355013.1"
                     /translation="MKTIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVN
                     FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPIL
                     HIAKSSAKALKQENIQKIGLLGTKYTMTQDFYKKMLIEENISVITPSDEDIKIVNDII
                     FNELCKGEIKQDSKEKYLNIIKKLQEKGAKGVLLACTEIGLLISKNDTNIKIFDTSLI
                     HALDAANEALKDL"
BASE COUNT         3502 a         1790 c         1769 g         3908 t
ORIGIN      
        1 tactgattct agtatagaat cagtaaataa taatatgtgc aatttgtggc ccatgaacac
       61 caaaaacagt gataagttct atatctgctg ttcttgaagg ccctgctata aataagatat
      121 tagtaggtaa aatttcattt tcttttttta ctaaatttaa agcttcgcta agacttttaa
      181 caacattttc ttttttaagc aatactatgc aaagtttagg tgcaaggctt agcattctag
      241 gttgggtttt acttgaaggt ataagtgcaa ctccgtgaga gcttacccct gctcttgcgt
      301 gaatgatgga aaaatcacta tgaaaaactt cagatcttaa attttcgatt tctttatcaa
      361 agcaaatctt tttttctgct ttgatttgtt ctaaatttaa atttaaatcc gctccataaa
      421 tcatactttt aaagccatat tttgcgacaa tttcattgat tttttcttct aaggtatctt
      481 ttgtagcatt ttcaacgatg tatttgttat cgctcatttt ttgcttcatt tctgtaagca
      541 tatcttgggt tgtctggata tgttctacag gatctatact ttcaatgcgt gtgaaagttg
      601 tttctttgta agctttttta agatgttcta aaatatttgc tttgcttttg cttgaaattt
      661 catcgatttt actcatagct tactccttct agtttttgca cttctttata aagatccatt
      721 ttaatttgag gtaattcttt aaaagcgtac cattttttaa tcacaggcaa aatgcttgcg
      781 aaattttgta ccgtccagtt gaaataatgt gcttttgaaa gtgaaaaacg ccatttatcg
      841 ccattggttg cgatattttt aaattgttta aaagcaaagg cttctagggc attgtgatga
      901 acattatttg ctcctaaagg tggattttta ccttgtccta ttttatcaca tcttaatttg
      961 cgaataagat cagccaaagg aatttggact ggacaaactt cagaacaacg cccacaaagt
     1021 gaacagaaat tcaaaatatc tcctgtatga tctataccaa aaatattagg actgattact
     1081 tctcctatag gtcctggata agtggtttga taagcatgtc cgccgatttg atcataaaca
     1141 gggcaaaaat tcatacaagc cccgcatcga atacaacgca aagcctcata ataatcctca
     1201 tgagctaaca ttttagagcg attgtgatca aataaaatca catgtacttc tttaggacca
     1261 tctaaatctc cattttttct agggcctgta atgatattgt tataagttgg tataaattgt
     1321 cctgtggctg aaggagtaag taaagaaacc atagtagccg catcttcaaa gctttccatg
     1381 actttttcta taccacaaag tgcgatatga atatcaggtg ctgtagtgca cattctacca
     1441 tttccttcat tttctataag ccaaaaagct ccttctcttg acatggcaaa attgacccca
     1501 ctaagtccaa gttttaagcc ttcaaaatct tttcttaaat gttctctagc caccgcattt
     1561 aaactttcgg gttcatcgtt ttctaaattt gctcctaatt tttctttgaa aatttctccg
     1621 atttcatggc ggtttctatg tatggcaggt acaactatgt gtaaaggggg ttcttcatta
     1681 agctgtaaaa taagctctcc aagatcggtt tctatagctt ttaaaccttt tttttctagg
     1741 tagtgattta ggcctatttc ttcacttgcc atagacttgc cttttaaaag cttggtgata
     1801 tttttttctt tcatgatttc atagacgatt tcacaggcat cttcatcact acttgcccaa
     1861 tgcaccttaa tgccattttt tgtagcattt ttttcaaatt ctaaaagtct ttcttctaag
     1921 ctcattaagg cattattttt agcttgctta gctttagctc ttaagccctg ccagtcttta
     1981 aatctagcat caataacatt gagtctattt ttttgcaaag tatgcatggc agtcattaaa
     2041 ttttcttgca tttgtttgtc attgagttta atttgaacga tttgttcgtg aggaattttt
     2101 tgactcatag tctctctcct tctaagcgtt taagtaaaaa gtcatataaa tgtatgcctt
     2161 ttatatccaa acccattctt ttcattgtgc catctatatt taaaagacaa cctccatcac
     2221 cactgatgag atattttgca ccgctatttt gtatatcttt gattttgctt cttaccatag
     2281 catttgaaat ttcaggctct tttactgaaa aggttcctcc aaaaccacag cattcttctt
     2341 cgtattgaag ttctactaat tctacgtttt ttagtttttt gataagattt ttactcgctt
     2401 gtatgctttt ttgcactctt aaagcatggc aattagaatg ccaagttact tttataggtg
     2461 cacctttatc ttcataatct acttttaaaa cttcatcaag gtattgtgaa agttctatca
     2521 ctctagagct aaaagttttt attttggaaa attcaggtct gtttttaaaa agctctttat
     2581 agtcatgact catcataccc gcacaagaac cactgggtac aacgatggga taatctttat
     2641 caaataaatc tacattatat aaagcgatct cacgactttc atcgaaataa cctgagttaa
     2701 aagaaggttg ggcgcaacag gtttgatttt ttttgaaaat cacttcaata ccctcacgcc
     2761 ttaaaagttt tatcgcattt aaaacgcttt gttgcatagc agcacttcct aagcatgtgg
     2821 cgtaaaaata cacttttttc atcatttttc tccttttagg ataatttagg ataaatattc
     2881 taatcctgta aaaataaaag caaagtaaaa tttctaacaa atattctaaa aacgaatatt
     2941 tgttgaaata aaacttaaat ttttttaatt atttcactat aacttcaggg atgattcctt
     3001 gtaagaaaaa agctataatg caagtccaaa ttcctattaa aataataaaa gctacagaat
     3061 attttaatgt gaatttgaaa agatcagatt cttttcccac aagtccaacc gctgcacaag
     3121 ctatagcaat gctttgtgga ctgatcatct ttccaacaac cccacctact gaattagctg
     3181 ctaaaaataa agcttcgcta atacctagtt tttgagcgct tacttgttgc aaggttccaa
     3241 aaagtaaatt agcacttgta tcagagcctg ttaaaaatac ccctatccag ccaatgattg
     3301 gtgaaaagaa agaaaaagca tcacctgtgt gtgcaaaagc aagtcctaaa gtagtgctca
     3361 taccactatt tttagagata aaagcaaagg ccacaaccaa acctatggtg atacaaggta
     3421 tagccatttc ttttaaggta acccaaaagc attctgcagc atcttcggct ttgattttta
     3481 aaatagctat agttagaaaa gcggcaagta aaatcgctgt tcctgcttga gctacggttt
     3541 ttccattgat taaatctaca cccaaggcca aagataaagg cttagcttct cctatgcctg
     3601 tgatagaagg gcttaaaatt ccagttgtga tattgctaaa ttgtaaagta atacttgtat
     3661 agcttaaaat tccgtcctta tcaaagagag ctttaaacca aggttgtgtc caaatgataa
     3721 tacaaacaat gagtaaaata aaaggtgacc aagcttttaa aatttgatta aaacttaagg
     3781 tgttatcttg agtgaaattg ctttcattgt caaatctaaa aatatttttt ggtttccaaa
     3841 atttcaaaaa tacagtcgta actgctaaag aaaccacagc tgaaataata tcaggtaatt
     3901 ccgctcctag gtgatttgag cttaaaaatt gagtagttgt aaaacttagc gccgcaacta
     3961 aaatagctgg aaaagtttct ttaatacctt taaatccatc cattaaaaaa actatgaaaa
     4021 aaggtatagt aaggcttaaa ggaactagca ttctacctac catggcagaa actgaatgct
     4081 gttctatgcc gacaagattt gccatagcaa taataggaat tcccaccgca ccaaaagcaa
     4141 caggagcggt atttgcgata agacaaagcc ctgcagcttg taaaggacgc aagccaagtc
     4201 ctactaaaag tgcagcggtt atagccacag ggccaccaaa acctatagca ccctctaaaa
     4261 atgaaccaaa acaaaaacct attaaaatca cttgaattct atgatctgga gtaatgctca
     4321 tcacgctttt tttaatgatt tcaaaagaac ctgacttgat agaaagtttg taaagaaaga
     4381 ttgccgcgat gataatccaa gctataggcc acataccatt tgtaaagcct tgaataaaac
     4441 ttgcacccac taaattccaa ggcattttat aggcaaataa agctaccaaa gtagcaagta
     4501 taacagttaa aaaacctgct tgatagcctt taagttttaa aacaaccaaa caaactaaaa
     4561 aacatagtat aggtaaaaat gccactaaag cacttagcca aatgtttgaa aaagggtcat
     4621 aaatttgttg ccatgttaaa atttgttcca atttttcctc cttgataatt attatgtata
     4681 aatttattgt aacaaaaaat taaattaaaa taaaagaatt atagagtaag gtaaattaca
     4741 ttgtattatt attaattatt ttgtgtattt tagtaatatc ataaatatta aataaatata
     4801 aaaatagaac aagataaaaa tcttattcta aaggggtagc agctgttaaa ggtggggtta
     4861 taatcattag ttcatttact tcagcaaaaa aaataggatc tagggtgcaa ggggctattc
     4921 caaagcgttt ttgtatagga atatttggat taaaaaaagt tactatacat tcatcagatt
     4981 ccaaaactaa agaacgaatt tgcacagctg aagttgttgt tggcattata gaaaatacag
     5041 tttctaattt accatctttt agatcatctt gacaagattt tgctccaaag gttccatctt
     5101 ctaagatggc taaacaaaga tcgctttctt ttggatttgt aaattgcaca taaccaaaag
     5161 gaagttcatc agctaattta tctttttgtt ttaactcatc gcttaaaaca atttctttaa
     5221 tattccaatt ttgatcaata ggatcttttg aggtatccct aaaggcgctc aaaaaaattc
     5281 ccgtttctaa gcttcttata gaaaccattt cggtaaaatc tttcaaatct ccagtaggag
     5341 ttgcaaaggc taaagttata aacataaaaa acaaagtaat aatttttttc atattaaatg
     5401 tcctaaaatt ttctaaaatt tactggaaaa tgatctgaaa ctatatgaga tcttaaactt
     5461 gcaagcatta aaatcgcagc taaaagcggt ggagtatagg tttgttgtct atttgaattt
     5521 cctgtaattg cataatcaag agtccctccg cttgcttgag ttgcgctagt tggaaaaacc
     5581 actctaattc tatttgctaa ttctctatcc actgtacttg ttatagtaga aggatcacgg
     5641 ttaaaatccc ctgctatcat ccagttaact tgaggcatat ttgcaaaatg tgcatctaca
     5701 gctgtgataa ttgctcctac atctgttcct ccattagcta aagcatggat attgaaaaaa
     5761 gcatcatttc cattgcgaat tcctataatg ggtcttgaaa ctgtagtagg tggaggtaaa
     5821 acaatcactt cttcagcttg cattcttgaa actatagcta aatttacacg attagctcct
     5881 acatcaacgc gagaataata aataaaaacc ctatcaggcc ttgaaagagt tcctaaattc
     5941 cactcatatt catcaatagg tgttccacct tgttgcacat ggcgtcctgt tggagtggct
     6001 gttcttggta aagttcctgc ttcttgtatc attaagatat ctaaggggtt tgctccactt
     6061 acaagttgtc ttacgctaac actccatttg ctttctgtgg ctgcggatga gccttgcaaa
     6121 ttccaagtgc caacattaaa attttctaaa tttgcaaaag caaggttaaa agataaaaat
     6181 aaacatataa tttttttcat cgtacctctc cttggcgata taaaggtttt gcggtaaaag
     6241 gtggagtagt taaaaaccat tgttgatcaa aattatcttt ttttgcacac tctacggtaa
     6301 aaattttaaa aaccttgtga aaatcaccat aaagatttgt aataggtgct tgtatgcatt
     6361 ttccatttcc taaattttta atttgaaccg ctgtattgct catagggata agtttccaca
     6421 tttgtgcgtg attgcttgca tcgcaaggat aatggataat tccattacca taagcattaa
     6481 gacaagtatt ggttttggca tttttaatca ttgcaaaatc attaggataa agcaaaagtt
     6541 gccaaactct agcatcgcca aatcctttac tatcgattaa agtatagccc caaatccaat
     6601 ttccttgtgc taaagcccaa accgttaaag ctgctccgct agggcctaaa atggttaaaa
     6661 aatcagaaac cgcagggcga ttttcaaaaa ttaaaacatc attaaaagct tcgtctttaa
     6721 agcgaggatt gatcccattt actgcattat tgttggcact attgcttgtt ctagttaaag
     6781 gtggggtaat aggagtaata ggtactaaat cagcaccgct aattaaactt ggaatttctt
     6841 gattggtggg aaaagtaggt tcaagtccta gttttaaagg atcagtatct tcaaattctc
     6901 caaatgaacg ccccaaagga tttacatttt caaatttaga agaacatgca taaagaaaaa
     6961 aagtcataaa acaacataaa ataaaaacta taattttttg cattaaaaac cttgatatgt
     7021 atttaaattt ttaagaaaat aataacataa atttcattat aattttccgc tttttaaaaa
     7081 tgttttattt tgttgttttt aaaggtagaa tttacatgta tcttaaacac ttatatttta
     7141 atatctctca aatttttaat ttttacaaag aaggttttaa aaatttaact cttggaaaga
     7201 ccctttggaa aattatcttt atcaaacttt ttgttatgtt tgtgatttta aaactttttg
     7261 tttttgatgt aaattttaat tctattttta aaagcgacaa agaaaaaagc acttttgtac
     7321 tcaaaaatct tacactcgaa ggaaaataaa tgaacgaact tagtagcgtt gattggtcaa
     7381 gagcgcagtt tgccttaact gcactttatc attttttgtt tgtgccttta accttaggct
     7441 tgtcttttat gatcgctatc atggaaacca tctatgtaaa aactaaaaat gaaagatgga
     7501 aaaaaatcac caaattttgg ctttcattat ttgctataaa ttttgctatc ggtgtagcta
     7561 caggcattat aatggaattt gaatttggaa caaactgggc aaattatagc tggtttgtgg
     7621 gtgatatttt tggtgcacct ttggcggttg aaggtattat ggcatttttt ttagaggcta
     7681 ctttttttgc agttatgttt tttggctggg ataaagtaag caagggtttt cacttacttt
     7741 caacttggtg tgtggctata ggaagtaatc tttctgcttt ttggatttta gtggcaaatg
     7801 gttggatgca atatcctgta ggaatgagct ttaaccctga cacagcaaga aatgaaatgc
     7861 aaagcttttt tgaagtagca ctttctcctg tagctatttc aaaattttta cataccatag
     7921 gcagtggtta tgtgatttca gctttatttg taatgggaat ttcagcttgg tttatgttaa
     7981 aaggacgcca tattatcgag gctaaaaaaa gcttagttgt aggagctagt tttggtttgg
     8041 tttgttcaat ctttttgttt ttcagcggag atgaaagcgc ttaccgtgta actcaaactc
     8101 aacctatgaa acttgcagct atggaagggg tttatcaagg tgaacatcgt gcaggacttg
     8161 taccttttgg aattttaaat cctaaaaaaa ccatagataa taacgaaagt gtgtttttat
     8221 ttgacattac tataccttac gctctttcta tattaggaaa ccgtgatcca aattcttttg
     8281 ttccaggaat tgaagatttg atctatggaa atgaaagcaa aggtatagaa cctatgcaaa
     8341 atcgtatcga tagaggaaaa atcgctatac aagctctaaa agactataaa cttgctaaag
     8401 aaagcaatga tacaatagct atggcaaatc acaaattcat tttagaaact cattttaaag
     8461 attttggtta tggatattta gaaaaaccaa gcgatactat tccacctgtg gctttaactt
     8521 tttatagctt tcatatcatg gttgctttag gaagtttttt ctttttactt ttcatcgtta
     8581 cgctttatct taccatggca aatgatattg agaaatttag aaaagtactt tgggtgtgtt
     8641 tgttatccat tccattgggt tatattgccg ctgaagcagg ttggattgtt gctgaagtag
     8701 gcagacaacc ttgggcaatt caagacttgc ttcctgtaca tatcgcagca acacaacttg
     8761 gaaaagtcaa tgttcaaatt tcattttgga tttttgcagt actttttaca gccttattga
     8821 ttgcagaagt taaaatcatg cttactcaga ttaaaaaagg ttttgacgca catgcaggac
     8881 atactccact tatgggcaaa ggagaaaaat aatgtttttt ggtttagaac ttgaaggttt
     8941 gcaaatttat tggtggttga ttttaagttt gctcggcgga cttttggttt ttatgttttt
     9001 tgtccaaggt ggacagactt taatcgatga gcttagcaag gatgagcttg aaaaaaccat
     9061 gctagtcaat tctttagggc gtaaatggga gcttggtttt acaactctcg tactttttgg
     9121 cggagcagct tttgcagctt ttccactttt ttatagtaca agttttggcg gagcttattg
     9181 ggcttggctt tgtattttat tttgttttat tttacaagct gtggcttatg agtatcgtaa
     9241 aaaagaaaat aatgtttatg gctctaaaac ctatgaaatt tttcttaaaa tcaatggtta
     9301 tttaggtgta tttttaatcg gagttgcagt aagtagcttt tttagcggtt ctgaatttat
     9361 cttaaatgag cataattttg tttcttggca aaaccctttg cacggcttag aacttttact
     9421 taatcctttt aattatctct taggcttagc tttagtattt ttagcaaggc ttttaggcgc
     9481 agcgtatttt ataaacaata tcaatgatga gaatatcaaa ataagagcta tgaaaaaact
     9541 tatgatcaat agtattttat ttttaccttt tttcttaggt tttttagtgt ggattttctt
     9601 aaaagatggt tttagtgtag atgcaaatgg agttgtaagc atgagtgcga atttatattt
     9661 atataatttc ttaaatcaaa tgatttttgc tgttttgctt gctatcggtg tgattttagt
     9721 gcttttaggt atgtttcaag gagcaaaagg ttgctctaaa gctattttta ccctaggact
     9781 tggaacggtt ttaacagttt ttgctttatt atcaagcatt ggtttaggtc aaagtgcttt
     9841 ttacccatct ttaagtgatt tgcaaagttc tttaacttta aaaaatgcaa gttcaagcta
     9901 ttatactcta agcgtcatgg cttatgtgtc tttacttgta ccttttgttt tagcttatat
     9961 tatctatgtt tggaatgcaa tggataaagt aaaaatcaca cgcgaagaaa tcgcaaacga
    10021 tgatcacgca tattaaggag aaaaaatgtt acatgctttg tttttattgg cttggccttt
    10081 agtaatttat ctgagctata aatttataat gctaaatatc aatcaattag aaaaagatag
    10141 caaactataa agcaagataa gatttaaacc gatataagta taaatctttt caaaatattg
    10201 caatttgccc atttttgggc atcttttaat cataaatctt ttaaagcttc attagcagca
    10261 tcaagggcgt gaataaggct tgtgtcaaaa attttgatat ttgtatcatt tttagatatt
    10321 aataaaccaa tttcagtgca agctaaaagc actccttttg cccctttttc ttgtaatttt
    10381 tttataatat ttaaatattt ttctttagaa tcttgcttga tttcaccttt gcaaagctca
    10441 ttaaaaatga tatcattaac gatttttata tcttcatcac taggagtaat aacgctaata
    10501 ttttcttcaa tcagcatttt tttataaaaa tcctgcgtca ttgtgtattt agtacccaat
    10561 aaaccaattt tttgtatgtt ttcttgtttt aaagccttag cagaactttt tgcaatatgt
    10621 aaaataggga tatttatatt ttgttgaatt tcatcaaaaa ccttatgcat agtattagtt
    10681 gcaattatta taaaattagc ccctgcaagt tctaattttt tagcacattg agtcaaaatt
    10741 tgtgcagctt cttgccattt atcttggctt tgtaaatttt ctatttcttc aaaattaaca
    10801 ctgtaaagta aaatttttgc agaatttaaa gattttaatt tatcatttat agcttgattt
    10861 attgttttat aataagtaat agtgctttca aaactcattc cgcctataat accaatggtt
    10921 ttcatttttc tccttaagaa ttaatttttg agtcgtttta ttacaatat
//
LOCUS       DAPIWB010000053        10905 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.054, whole genome shotgun sequence.
ACCESSION   DAPIWB010000053 DAPIWB010000000
VERSION     DAPIWB010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10905)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10905)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10905
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.054"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..1069
                     /locus_tag="RJ266_001277"
     CDS             <1..1069
                     /locus_tag="RJ266_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF5644 domain-containing protein"
                     /protein_id="HDV7355014.1"
                     /translation="KLELRIFRFDKTKDYEAYYKPYIYDNYENFASFYDLLLQVQNDD
                     IYFDFDKDEDTYIVVNKQIIPLFTPLEKIAKEFDFSLCIEPLNTKRAIKDLIIDKNDF
                     LDKYKYLEKFGDEEDKKLYAKYDYLYYASEILDYLPEYMGDGVFYLASKMIEKYPEKK
                     IEILKTLADKEKGIFYHLESKNEILETTIKNLQNEILNLGLFDKNILHFDLPKTNAFD
                     NEIKELKEIKHNFKDFNIAFYGFNACDTLKSKLKAKFISYENSIKNNGFSLLNLNPTL
                     SYKIAADIVLDAYDSGADFMVVKEEKDFYLFDTCAKKLMQTSGREFEDFYILSRFEFL
                     ALIKGIQAPSLKNHTLKVSLI"
     gene            1066..1449
                     /locus_tag="RJ266_001278"
     CDS             1066..1449
                     /locus_tag="RJ266_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDV7355015.1"
                     /translation="MKISLECKDLIIEKTLELFLKDHLVMKKNCDFIISDEKIHTAKP
                     LFIISKNSPFLSIPFSKEALFESLNEFDNALKAAALQLALEQKRLLEEKIDAIALEFK
                     KDYENKIDLAIKDLKNKLVKALNDE"
     gene            1442..2125
                     /gene="rsmD"
                     /locus_tag="RJ266_001279"
     CDS             1442..2125
                     /gene="rsmD"
                     /locus_tag="RJ266_001279"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HDV7355016.1"
                     /translation="MNDEFISVKDFFNHNEKRKKFLQKQEIKPPKEKTKKTKETKLYT
                     NIESGKYKGKKLLLPSLTTTRSTKSIVKSCVFNVIREDLRSKIFIEAFGGSALMAAEA
                     LSNHALKAYAIELDAKAYKIALENAKNIDPNLEVIHANTFEILPKLIENSKNEIILYL
                     DPPFDIREGFSDIYEKIYHFLENLDLKTLNLIIFEYHSTIKTPEKIQNFQKVKEKKFG
                     STSLSFYSS"
     gene            2184..3230
                     /locus_tag="RJ266_001280"
     CDS             2184..3230
                     /locus_tag="RJ266_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HDV7355017.1"
                     /translation="MRVLTIFLLFMTSIFAVQIKDVANTVGVRDNQLIGYGLVVGLNG
                     SGDGTSSKFTLQSISNLLQGMNIKVDPNDIKSKNTAAVMVTAKLPAFAKSGDKLDITV
                     SSMGDAKSLQGGTLLLTALRGIDGEIYAIAQGSISTGGLTPRPGGAGSHSTAATVMGG
                     ANVEREIPQNFSQNNDLTLSLKVADFKTANDIERVLNTVFGEEVAKAIDSRTVKLKKP
                     EDLSNVDFMARVLEQDIAYKPQSKVIIDERTGTVIAGVDVEVEPVLITHKDITIKIDP
                     NNNAVANQNEIDMKDGGFVDPSSNTLRINNAKSTVANIARMLNKLGATPNDIIAIMEN
                     LKRAGAINADLEII"
     gene            3230..3571
                     /locus_tag="RJ266_001281"
     CDS             3230..3571
                     /locus_tag="RJ266_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355018.1"
                     /translation="MKVDNFLNTYSMNSALLDRAAKARSLESSIKINDNDIVTKSKED
                     EALKEQTDAFEAFFLKQVLDVSLKSQNSLFGKDASDEIYSSMYNDTMSKALSGGMGFS
                     KLLYDFLKERG"
     gene            3634..3831
                     /gene="flgM"
                     /locus_tag="RJ266_001282"
     CDS             3634..3831
                     /gene="flgM"
                     /locus_tag="RJ266_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis anti-sigma factor FlgM"
                     /protein_id="HDV7355019.1"
                     /translation="MINPIQQSYVANTALNTNRIDKETKTNDTQKTENDKASKIAEQI
                     KNGTYKIDTKATAAAIADSLI"
     gene            3874..4308
                     /locus_tag="RJ266_001283"
     CDS             3874..4308
                     /locus_tag="RJ266_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlgN"
                     /protein_id="HDV7355020.1"
                     /translation="MLKQRLDEVNAILAKLIALTEEDIENIKVAKHESVTPSVEEKNK
                     LIAEFITAKKQLDVALVELNNSSTKGLSELLDDEDKQKLDLLKKNLQNLHSKNKEYAK
                     FVLIVKDFLDGLVNKMFDINDGTNNAYGDKKTNPESIFKINV"
     gene            4318..6144
                     /gene="flgK"
                     /locus_tag="RJ266_001284"
     CDS             4318..6144
                     /gene="flgK"
                     /locus_tag="RJ266_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HDV7355021.1"
                     /translation="MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQT
                     TNGYITTGGVQVGTGTAVESIVRLHDEYSYYKLKGASTQLEYTKYMASTLQEIAQRFP
                     DLQNTGILKDLENYNKAWNDFASNPNENATKIALVKASQTLTESVNNTFATLDKIQKK
                     VNDDIKNTVDEINRIGEEIATINKQIYGQEALPTEHANELRDRRDELELTLSKLVSAV
                     ASKNEINQDNRLDTTITDPGHQYNLSIEGFSIVDGINFHPLKLDYDDKNKSYSIYYET
                     PDEKVRDLTAKINGGQLGAQLDLRGRNYSKSEGKYEDGIIQGYMDSLDTFAKTMINET
                     NNLYASSAKSSVTSDYLSGLKGDIPLVNYDRTIQPGSFDIVIYDDKGDKKLTKTITID
                     VNTTMNDIMRQINANTDDNNDHNANNDVDDHINASFSYDAKTGDGLFQINAKSGFKVA
                     IEDKGTNFAGAFSIGGFFSGTDASDMKVKDSILNDPSTVRASLSGVDSGNDMANKIIQ
                     LQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYNSVYSEYQS
                     KSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLLGLKS"
     gene            6161..6925
                     /locus_tag="RJ266_001285"
     CDS             6161..6925
                     /locus_tag="RJ266_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02757 family protein"
                     /protein_id="HDV7355022.1"
                     /translation="MKNFIHLKAKLDFLANQKNTNHSLFETPDPLQIAKIHNDEFIAL
                     ICALFAYGNAKNIVNFLKKLDFSLLNLQEKQIKKELKNLKYRFQNEKDIQEIFITLSR
                     LKNEISLYELFYQAYQERENTTDAILAFMQKIKTLNSYSSYGYDFFFGKIWQNTPTSP
                     LKRYNMYLRWMVRKDELDLGLFTKIHTKDLLIPLDTHAHKISLTLGLLKRKIYDYKSV
                     LELTQNLKKLDANDPIKYDFALYRLGQSKEIDKFKE"
     gene            6929..7693
                     /locus_tag="RJ266_001286"
     CDS             6929..7693
                     /locus_tag="RJ266_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HDV7355023.1"
                     /translation="MGFEHLNTIYYFILFFVALFAGFIDSIVGGGGLITLPALIACGI
                     PAHLSLATNKLQSVFGSFTATLTYFKSTTLPHLAWGVFFTALGAAIGSYSVLFVKDEQ
                     LKLIILIFLTLTFLYTALRPNLGKHESEPKIKNIKIFHLICGLTLGFYDGFLGPGTGS
                     FWIFACVMLLGFNMKKASINTKILNFTSNIIALAIFLWQYELLWAVGLLMGVGQVLGA
                     YLGSKLVLKTNGKFIKTLFLIVVGATIIKVAWDYFS"
     gene            complement(7686..8867)
                     /locus_tag="RJ266_001287"
     CDS             complement(7686..8867)
                     /locus_tag="RJ266_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002880441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HDV7355024.1"
                     /translation="MKFYEVEFLKNNQNYTKTIKAENLNTAQAKALSKNWKIIDIKEI
                     QKSNFQRLKDENFILFFKELALLCEVGLSVQEAIRELYLMHSCKIMKKILDNLILAQN
                     LNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKSLESQKQLKKAFRYPT
                     LVFLSIIGAFLFLMLFVVPNFKDLFENLGTSLPFITHVMLEIYNFLDDYGIFCIFLFV
                     IFIVMLILAYKNFHSFAFSCDFLFLKIPLISRLIIYNQNYYFFMVFSLLLKNGISISK
                     AFDLAIIGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIFDSLVFSMLSVAMKSGRL
                     EVLSEEIAKYYQQKSENLMDRFLVFLEPMMTLFVAFLVLFLALGIFLPMWELSSGVNF
                     N"
     gene            complement(8864..10423)
                     /locus_tag="RJ266_001288"
     CDS             complement(8864..10423)
                     /locus_tag="RJ266_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HDV7355025.1"
                     /translation="MESRMDKIFQAYIDNEISLDEICTKFNITSWDFFKKLANFCNLH
                     FVDLDEDNDFIYEGIPFSLLLKFKFLLIKNNDGFMIIRSKPCSLELLEQVKTFMICEK
                     IDTAIADELKIAKILNQIRIQEEIKRLSIKLRLEWQENHKRDDQSCISQIFDFLLHEI
                     LSFHASDIHIEARNDDALIRFRVDGILREFAIFEKDIYEALVFHVKFLACLNLAESRK
                     TQDGSFELDFENERYDFRVSCLPLIYGESVVIRILKHDKEILDLYKLNLGNKNLEILK
                     KILHRPNGMILLTGPTGSGKSTTLYACLNELKSIEKKIISAEDPIEYKIPLVQQILLN
                     SKVGVEFNSVLRAILRQDPDIIMIGEIRDEESLDIALKASLTGHLLLSTLHTNDALST
                     IDRLLDMQAKSYLIASALSLVIAQRLVRKLCPWCKQKSKKHYIEFEGEFFEPKGCERC
                     HHSGFFGRELIAECLEINEDLACAIRENQDKTILMELAKKYGFQTMFEQGLKKAKEGL
                     TSIDELLRVVR"
     gene            complement(10413..10880)
                     /locus_tag="RJ266_001289"
     CDS             complement(10413..10880)
                     /locus_tag="RJ266_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009882975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transformation system protein"
                     /protein_id="HDV7355026.1"
                     /translation="MQKYNKQKNIYLQAIEHKKHLEQKILQAQILQEKNKISRDKLYK
                     ELEEVKAVQENTHISKIEIDSKILNISDLKKSFYQNPSYEKALNLAKKYFDIKAYQKT
                     IFWALKANELDKQKQDSWLIFAQAKRALGEEKEAQSALDTYINYYGLMELDGK"
BASE COUNT         4134 a         1697 c         1580 g         3494 t
ORIGIN      
        1 aaaattagaa ttaagaattt ttagatttga taaaactaag gattatgagg cttattataa
       61 accttatatt tatgataatt atgaaaattt tgcaagtttt tatgatctgc ttttgcaagt
      121 tcaaaatgat gatatttatt ttgattttga taaagatgaa gatacttaca tagttgtaaa
      181 taagcaaatc ataccacttt ttacaccttt agaaaaaata gcaaaagaat ttgattttag
      241 tctttgtatc gagcctttaa acacaaaaag agccattaaa gatcttatca tcgataaaaa
      301 tgatttttta gacaaataca aatatcttga aaaatttggt gatgaagagg ataaaaaact
      361 ttatgcaaaa tatgattatt tatattatgc aagtgaaatt ttagactatc ttcctgaata
      421 tatgggcgat ggagtgtttt atttggcttc aaaaatgata gaaaaatatc ctgaaaaaaa
      481 gatagaaatt ttaaaaactc tagcagataa agaaaagggt attttttatc atcttgaaag
      541 caaaaatgaa attttagaaa caacgatcaa aaacctacaa aatgaaattt taaatttagg
      601 gctttttgat aaaaatattt tacactttga tttacctaaa accaatgctt ttgataatga
      661 gatcaaagaa cttaaagaaa ttaaacataa ttttaaagat ttcaatatag ctttttatgg
      721 ttttaatgct tgcgatactt taaaatccaa acttaaggct aaatttattt cctatgaaaa
      781 cagtataaaa aataatggct ttagcttgct taatctaaat cctacgctaa gctataaaat
      841 agccgcagat attgttttgg acgcttatga tagcggggct gattttatgg tagtaaaaga
      901 agaaaaagat ttttatcttt ttgatacttg tgctaaaaaa cttatgcaaa caagtggaag
      961 ggaatttgaa gacttttata ttttgagccg ttttgagttt ttagccctta tcaaaggcat
     1021 acaagctcca tcattaaaaa atcacacttt aaaggttagt ttgatatgaa aatctcttta
     1081 gaatgcaaag atctcatcat agaaaaaact ttagaacttt ttttaaaaga tcatttggta
     1141 atgaaaaaaa attgtgattt catcattagc gatgaaaaaa ttcataccgc aaaaccctta
     1201 tttatcatct ctaaaaactc tccattttta agcataccat ttagcaaaga agccttgttt
     1261 gagtctttaa atgaatttga taatgcctta aaagcagcag ctttgcaact tgcacttgaa
     1321 caaaaaagac tgcttgaaga aaaaattgac gctattgctt tggaatttaa aaaagattat
     1381 gaaaataaaa tcgatcttgc cataaaagat cttaaaaaca aactcgtaaa agcacttaat
     1441 gatgaatgat gaatttataa gcgttaaaga cttttttaat cacaatgaaa aaagaaaaaa
     1501 atttcttcaa aaacaagaaa ttaaacctcc caaagaaaaa acaaaaaaaa ccaaagaaac
     1561 aaagctttat acaaatatag aaagtggtaa atacaaaggg aaaaaactac ttttacctag
     1621 tcttacaaca acaagaagta ctaaaagcat agtcaaaagt tgtgttttta atgtaataag
     1681 agaagattta agaagtaaaa ttttcattga agcctttgga ggaagtgctt taatggcggc
     1741 tgaagcacta agtaatcatg ctttaaaagc ttatgctata gaacttgatg caaaagctta
     1801 taaaattgct ttagaaaatg ctaaaaatat agatccaaat ttagaagtga tccatgcaaa
     1861 tacttttgaa attttaccta aactcataga aaattcaaaa aatgaaatca tcttatatct
     1921 tgacccacct tttgatatca gagaaggttt tagtgatatt tatgaaaaaa tttatcattt
     1981 tttagaaaat ttagatttaa agactttaaa tttaatcatt tttgaatacc actcaaccat
     2041 aaaaactccc gaaaaaatcc aaaattttca aaaagttaaa gaaaagaaat ttggatcaac
     2101 tagcttaagt ttttactctt cttaactcac ttggaacact ttttgcttga tctatcatca
     2161 acaatagatt aaaggaagaa tccatgagag ttttaacgat atttttactc tttatgacaa
     2221 gcatttttgc agtgcaaatc aaggatgtag caaatactgt aggtgtaaga gataaccaac
     2281 ttataggtta tggacttgtt gtagggctta atggaagcgg cgatggaaca agctctaaat
     2341 ttacactaca atccatctca aaccttttgc aaggtatgaa tatcaaagta gatcctaatg
     2401 atatcaaatc aaaaaatacc gcagctgtta tggttacagc caaacttcca gcctttgcaa
     2461 aaagcggaga taaacttgat attaccgttt catctatggg tgatgcaaaa tctttacaag
     2521 gtggaacact tttactgact gcacttcgtg ggattgatgg tgaaatttat gctatagcac
     2581 aaggctctat ctcaacagga ggtttaacac ctagaccagg aggagcaggt tctcactcaa
     2641 ctgctgcaac tgtaatgggc ggagctaatg tagaaagaga aattccacaa aattttagcc
     2701 aaaacaatga tctaacctta agtttaaaag tagcggattt taaaaccgca aacgatatag
     2761 aaagagtttt aaatactgtc tttggcgaag aagtagctaa agccatcgac tctcgcacag
     2821 taaaactcaa aaaacctgaa gatctttcaa atgttgattt tatggcaaga gttttagaac
     2881 aagatatagc ttataaacca caaagcaaag ttatcatcga tgaaagaaca ggaacagtga
     2941 ttgctggagt tgatgtggag gtagaacctg ttttaatcac tcataaagat atcactataa
     3001 aaatagatcc aaacaataac gcagtagcta atcaaaatga aatcgatatg aaagatggtg
     3061 gttttgtaga tccaagttca aataccttaa gaatcaacaa tgcaaaaagc acagttgcaa
     3121 atatagctag aatgcttaac aaacttggag caaccccaaa tgacattatc gctattatgg
     3181 aaaatttaaa gcgcgcaggt gcaattaacg cggatttgga gatcatctaa tgaaagtgga
     3241 taatttttta aatacttata gtatgaatag cgctttactt gatcgtgcag ccaaagcaag
     3301 aagtttagaa tcaagcatca aaataaatga caatgatata gttacaaaga gcaaagaaga
     3361 tgaagcctta aaagaacaaa cggatgcttt tgaggcattt tttttaaagc aagttttaga
     3421 tgtatcttta aaaagtcaaa attcactctt tggaaaagat gccagcgatg aaatatactc
     3481 ttccatgtat aatgatacca tgagtaaagc tttaagtgga ggtatgggtt tttcaaaatt
     3541 attatacgat tttttaaaag aaaggggtta agttttttaa atttaggtcg atatggtttg
     3601 tagaggatta taactaagat caaggaggca gaaatgatca atcctataca acaaagttat
     3661 gtggcaaata ccgcattaaa tacaaataga atagataaag aaactaaaac aaacgatact
     3721 caaaaaacgg aaaatgataa agcgagtaaa atcgcagagc agattaaaaa tggtacttat
     3781 aaaatcgata caaaagctac ggctgctgcg attgctgact ctttaatcta aaaactttca
     3841 ttctcctttt tttgagagag aaaaggagaa aatatgctta aacaaagact tgatgaagta
     3901 aatgctatct tagcaaaact tattgcttta accgaagaag atatagaaaa tatcaaagtg
     3961 gctaaacatg agagtgtaac gccaagtgta gaagaaaaaa acaaacttat cgcggaattt
     4021 attacagcta aaaaacaact tgatgttgcc ttggttgagc taaataatag ctctacaaaa
     4081 gggcttagtg aactcttaga tgatgaagat aaacaaaaac tagatctact taaaaaaaat
     4141 cttcaaaacc ttcatagtaa aaacaaagag tatgctaaat ttgttcttat tgtcaaagat
     4201 tttcttgatg gcttagtaaa taaaatgttt gatatcaatg atggaacaaa taatgcttat
     4261 ggagataaaa agacaaatcc agagtcaatt ttcaagatca atgtataagg atttataatg
     4321 ggtatttttg gaacattata cacaggtgtt acaggcttaa aggcaagcga agttcaaatc
     4381 gcaacaactg gaaataatat ctcaaatgct aatgcaactt tttatacacg ccaaagagtg
     4441 gtgcaaacta caaatggata tattacaaca ggtggagttc aagtaggcac aggaactgct
     4501 gtagaaagta tagtgcgttt gcatgatgag tattcttact ataaattaaa aggtgcatct
     4561 actcaactag aatatactaa atatatggct tccactttac aagaaattgc gcagcgtttt
     4621 cccgacttac aaaatactgg aattttgaaa gatttagaaa attataacaa agcttggaat
     4681 gattttgcat ctaaccccaa tgaaaatgcc acaaaaatag cccttgtaaa agcttctcaa
     4741 accttaacag aaagcgttaa taacactttt gcaaccttgg ataaaatcca aaaaaaagta
     4801 aatgatgata ttaaaaatac ggttgatgag attaatagaa tcggtgaaga aattgctact
     4861 ataaataaac aaatttatgg acaagaagcc ttaccaacag aacacgcaaa tgagcttagg
     4921 gatagaagag atgaacttga acttaccctt tcaaagctag ttagtgcagt tgcaagcaaa
     4981 aatgaaatca atcaagacaa tcgccttgat acaaccatca ctgatccagg acatcaatac
     5041 aatctaagta tagaaggttt tagtatagta gatgggataa attttcatcc tttaaagctt
     5101 gattatgatg ataaaaataa atcttatagc atttattatg aaactcctga tgaaaaagtt
     5161 cgcgatctta ctgcaaagat taacggtgga cagcttggtg ctcaacttga cttacgcggt
     5221 agaaactata gcaaaagcga aggaaaatat gaagatggaa ttatccaagg ttatatggat
     5281 tctttagata cttttgctaa gaccatgatc aatgaaacta acaatcttta tgcgagttct
     5341 gcgaaaagtt ctgttacttc tgattatcta tctggactta agggagatat tcctttagtt
     5401 aattacgaca gaaccataca accaggaagt tttgatatag tcatttatga tgataaaggc
     5461 gataaaaaac tcaccaaaac catcaccata gatgtaaata caaccatgaa tgatatcatg
     5521 cgtcaaatca atgctaatac agatgataat aacgatcaca atgcaaataa tgatgttgat
     5581 gatcatatca atgcaagttt tagctacgat gcaaaaactg gagatggttt attccaaatc
     5641 aatgcaaaat caggctttaa ggtagccatt gaagataaag gcacaaattt cgcaggtgcg
     5701 tttagcatag gtggtttttt cagcggaacc gatgcaagcg acatgaaagt aaaagattcc
     5761 atcttaaatg atccaagcac agtaagagca agtttaagtg gggttgatag tggcaatgac
     5821 atggcaaata aaatcatcca acttcaatat gaaaaagtta atttttataa tgaagatggc
     5881 actatcgata atcttaccat ggaagaatat taccgcaaac ttacaggtaa aatagcctca
     5941 gatggtgaaa ataacaatgt cgtcaattca agcaatgaaa ctctttataa ttctgtttat
     6001 agcgagtacc aatctaaaag tggcgtaaat acaaatgaag aattagccgc ccttatacaa
     6061 tatcaatcaa gttacggtgc agcagcaaaa atcgtctcaa ccgtagatca aatgcttgat
     6121 accttactag ggcttaaatc ttaagctcta gtaatatcaa atgaaaaatt ttatccatct
     6181 taaagctaag ctcgattttt tagccaatca aaaaaatacc aatcattccc tttttgaaac
     6241 tccagatcct ttgcaaattg ctaaaattca caatgatgaa tttattgcct taatttgtgc
     6301 tttatttgcc tatggaaatg ctaaaaatat agtaaatttt ctaaagaaac ttgatttttc
     6361 tttattaaac cttcaagaaa aacaaataaa aaaagaactt aaaaatttaa aataccgctt
     6421 ccaaaatgaa aaagatatac aagaaatttt tatcactctt tcaaggctga aaaatgaaat
     6481 ttcactctac gaactttttt atcaagccta tcaagaaaga gaaaatacca cagatgccat
     6541 cttagctttt atgcaaaaaa tcaaaacctt aaattcatat tcaagttatg gatatgattt
     6601 tttctttgga aaaatttggc aaaacacccc tacttcacct cttaaacgct ataatatgta
     6661 tctaagatgg atggttagaa aagatgaact tgatcttgga ctttttacca aaattcacac
     6721 caaagatctt ttaattccac ttgatacaca tgcacataaa atttccttga ctttaggact
     6781 tctaaagcgt aaaatatatg attataaaag tgttttagaa ctcacacaaa atttaaaaaa
     6841 attagatgca aatgatccca taaaatatga ctttgcactc tatcgtttag ggcaaagtaa
     6901 ggaaattgac aaatttaagg agtgaagaat gggttttgag cacttaaata cgatttatta
     6961 tttcatactt ttttttgtag ctctttttgc tggttttata gattctattg taggtggagg
     7021 agggcttatt actctaccag cactcatagc ctgtggaatt cctgcgcatt tatccttagc
     7081 aacaaacaaa ctccaaagcg tctttggttc ttttacggct actttaactt attttaaatc
     7141 caccactcta cctcatcttg cttggggtgt ttttttcaca gccttaggag cagctatagg
     7201 aagttatagt gttctttttg taaaagatga gcaattaaag cttattatct taatcttttt
     7261 aactcttacc ttcttatata cagccttacg tcccaactta ggcaaacacg aaagcgaacc
     7321 taaaataaaa aatatcaaaa tttttcattt aatttgtggc ttaactttag gattttatga
     7381 tggattttta gggcctggaa cgggttcatt ttggattttt gcttgtgtga tgctactagg
     7441 ttttaatatg aaaaaagcaa gcattaatac taaaatttta aattttacaa gcaatattat
     7501 tgcccttgct atatttttat ggcaatacga acttttatgg gctgtaggct tgcttatggg
     7561 tgtaggacaa gttttaggag cttatttagg ctcaaaactt gtattaaaaa ctaatggaaa
     7621 atttataaaa actttatttt taatcgttgt aggagctact atcattaaag tagcttggga
     7681 ttattttagt taaaattgac ccctgagcta agctcccaca taggtaaaaa tatacctaaa
     7741 gccaaaaaca aaactaaaaa cgccacaaat aaagtcatca taggctctaa aaaaaccaaa
     7801 aatctatcca ttaaattttc acttttttgt tgataatatt tggcaatttc ttcacttagc
     7861 acttcaagtc ttccgctttt catcgcaaca ctaagcatag aaaataccaa agaatcaaaa
     7921 atatcaatct ttttaaaagc ctgacttaac tcaagaccag aatctataaa actaaaaagt
     7981 tttttatact gaaaaattaa aaatttattt tcaagcccta taatagctaa atcaaaagct
     8041 ttagatattg aaattccatt ttttaaaagc aaagaaaaaa ccataaaaaa ataataattt
     8101 tgattataaa taatcaaacg agaaatcaaa ggtattttta aaaataaaaa atcgcaagaa
     8161 aaagcaaaag aatgaaaatt tttataagct aaaataagca taacaataaa aataacaaac
     8221 aaaaatatgc aaaaaattcc atagtcatct aaaaaattat aaatttctaa cattacatgc
     8281 gtgataaaag gcaaactcgt gcctaaattt tcaaataaat ctttaaaatt aggcactaca
     8341 aaaagcatta aaaacaaaaa tgctccgata atacttaaaa aaaccaaagt aggatatcta
     8401 aaagcctttt tcaattgttt ttgactctct aagctttttt ctcgaagttt agaaatttga
     8461 ctaaacactt cactgatttt tcctgtcttt tcagccgttt taatcaaagc taactccgca
     8521 cgatttaatc caaaattagc attttcaaaa gcttgattta gattttgggc taaaattaaa
     8581 ttgtctaata tctttttcat aatcttgcaa gagtgcataa gatataattc tctaatcgct
     8641 tcttgaacac ttaatccaac ttcacacaac aaagctagct ctttaaaaaa gagtataaaa
     8701 ttttcatcct ttaatctctg aaaattagat ttttgaattt cttttatatc aatgattttc
     8761 caattctttg acaaggcttt tgcttgtgct gtatttaaat tttcagcttt tatagttttt
     8821 gtataatttt gattgttttt aagaaattct acttcataaa atttcacctt acaaccctta
     8881 aaagctcatc tatacttgta agaccttctt tggctttttt taaaccttgt tcaaacatag
     8941 tttgaaagcc atattttttt gcaagctcca ttaaaatcgt tttatcttga ttttccctaa
     9001 ttgcacaagc taaatcttca ttgatctcta agcactcagc gattaattct ctgccaaaaa
     9061 atccactatg atgacaacgc tcacatcctt ttggttcaaa aaattcacct tcaaattcaa
     9121 tataatgttt tttgcttttt tgcttacacc aaggacaaag ttttctaacc aaacgctgtg
     9181 ctataacaag actcaaagcc gatgctatca agtaactttt tgcttgcata tccaaaagcc
     9241 tatcaatggt actaagagca tcattagtat gcaaggtgct taaaagcaaa tgacctgtta
     9301 aagaagcttt aagtgcaata tctaaacttt cttcatcgcg aatttctcct atcatgataa
     9361 tatcaggatc ttgccttaaa attgctctta aaacactatt aaactcgact ccaacttttg
     9421 aattgagcaa aatttgctgc actaaaggaa ttttatattc tataggatct tctgcggaaa
     9481 taatcttttt ttcaatactt ttcaactcat ttaaacacgc gtataaagtt gtgcttttac
     9541 cactacctgt aggaccggtt aataaaatca ttccattggg acgatgtaaa atctttttta
     9601 aaatttctaa atttttattt ccaagattta gtttatacaa atccaaaatt tctttatcat
     9661 gttttaaaat tcttataaca acactttcgc cataaatcaa aggcaaacat gaaacacgaa
     9721 aatcatatct ttcattttca aaatctaatt caaaacttcc atcttgtgtt tttcttgatt
     9781 cagctaaatt caaacaagct aaaaatttga catgaaaaac caaagcttca taaatatcct
     9841 tctcaaaaat agcaaattca cgcaaaattc catcaaccct aaacctaatc aaagcatcat
     9901 catttcttgc ctctatatga atatcactcg catgaaaaga taaaatttca tgtaataaaa
     9961 aatcaaaaat ttgactgatg caactttgat catctctttt gtgattttct tgccattcaa
    10021 gtctaagctt aatgcttaat cttttaatct cctcttgaat gcgaatttga tttaaaattt
    10081 tagctatctt taattcatcg gcaattgcag tgtcgatttt ttcacaaatc ataaaagtct
    10141 taacttgctc taaaagctct aaagaacaag gtttggatct aataatcata aagccgtcat
    10201 tgtttttaat aagcagaaat ttaaatttta aaagtaaaga aaaaggtata ccttcataaa
    10261 taaaatcatt atcttcatct aaatcaacaa aatgcaaatt acaaaaattt gctaattttt
    10321 taaaaaaatc ccaagaagtg atattaaatt tagtgcaaat ttcatcaaga cttatttcat
    10381 tatcaatata agcttgaaaa attttatcca ttctactttc catctaattc cattaaacca
    10441 taataattta tataagtatc taaagcactt tgagcttctt tttcttcgcc taaagctctt
    10501 ttagcctgag caaaaatcag ccaagaatct tgtttttgct tgtcaagttc attggctttt
    10561 aaagcccaaa atattgtctt ttgataagct ttaatatcaa aatacttctt agctaaattt
    10621 aatgcctttt catagcttgg attttgataa aaagattttt ttaaatcaga aatatttaaa
    10681 attttagaat caatttctat cttgctaata tgtgtatttt cctgcaccgc tttaacttct
    10741 tctagttctt tatataactt gtccctagaa atcttatttt tttcttgtaa aatttgcgct
    10801 tgaagaatct tttgctccaa atgcttttta tgttcaatag cctgcaaata aatatttttt
    10861 tgcttattat atttttgcat tagcacaaaa aaacaaaatg ctatt
//
LOCUS       DAPIWB010000054        10693 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.055, whole genome shotgun sequence.
ACCESSION   DAPIWB010000054 DAPIWB010000000
VERSION     DAPIWB010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10693)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10693)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10693
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.055"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            7..693
                     /gene="ung"
                     /locus_tag="RJ266_001290"
     CDS             7..693
                     /gene="ung"
                     /locus_tag="RJ266_001290"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012660877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HDV7355027.1"
                     /translation="MTINIDKIKINDDWKEFLRDEFQKKYFLEIKKQYLNAINQNIVI
                     YPPANLIFNAFNLCPLKEIKIIILGQDPYHQPNQAMGLSFSVPKNVKIPPSLNNIFKE
                     LQNDLNITPAKSGDLSSWAKQGVLLLNSILSVEANKAASHSSWGWQEFSDAIIHKLSN
                     EKSGLVFMLWGNYAKNKEILIDNTKHLILKAAHPSPLARTGFLGCKHFSKANEFLKKV
                     GKIPIDWKIV"
     gene            complement(703..1869)
                     /locus_tag="RJ266_001291"
     CDS             complement(703..1869)
                     /locus_tag="RJ266_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355028.1"
                     /translation="MTINSANPYQNLTLSNPLQNSSALNLIKDSKALDQEGNENSLEQ
                     LSYIFNNTTYASEFGFRINEEGFFDKDLNKIANIPESYNINIKSVRSIAKELAKQDEN
                     LNYNKIDLPYLLNSYHSSLKSINSEFLQDDNAYLSRDLISKLSSGFSTDNGEFLSQIS
                     RIYNNQEEIDLALSNITNLNTLMLDNKITNFHFDKAIENTSSNEILKPYLTKNAEVSK
                     SGLLMNFIYHDIKTQNEKEFNFFMKPATLELSSHQNLQKILKGETDIEDYIKKENEKK
                     MSFDLYLYVNGVDKKTSTQDKLSVFFQQYINYQKDMDLREFANSSSIFQIYIDQNRND
                     FDALKKQYQNQSQDTQRLEEANQLRSSSIENFLDRRQKQANINKILNSYMSVMV"
     gene            2025..2216
                     /gene="rpmI"
                     /locus_tag="RJ266_001292"
     CDS             2025..2216
                     /gene="rpmI"
                     /locus_tag="RJ266_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HDV7355029.1"
                     /translation="MPKMKSVKSAVKRFKVGKNKIKRGSAFRSHILTKKPAKRMRDLR
                     TAKYVHSTNVKAVEKMLGI"
     gene            2310..2663
                     /gene="rplT"
                     /locus_tag="RJ266_001293"
     CDS             2310..2663
                     /gene="rplT"
                     /locus_tag="RJ266_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HDV7355030.1"
                     /translation="MARVKTGVVRRRRHKKVLKLARGFYSGRRKHFRKAKEQLERSLV
                     YAYRDRRRKKRDFRRLWIVRINAACRLNDLSYSRFINGLKKAGIELDRKILADLAMND
                     AAAFAKIAEAAKKAL"
     gene            complement(2715..3358)
                     /locus_tag="RJ266_001294"
                     /pseudo
     CDS             complement(2715..3358)
                     /locus_tag="RJ266_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109080.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
     gene            complement(3355..3507)
                     /locus_tag="RJ266_001295"
     CDS             complement(3355..3507)
                     /locus_tag="RJ266_001295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355031.1"
                     /translation="MAIFFYEVENFNDFKPRYLKTFIQKYSDFKYYYLNIRAQKLEIT
                     NEIKIK"
     gene            complement(3711..3842)
                     /locus_tag="RJ266_001296"
                     /pseudo
     CDS             complement(3711..3842)
                     /locus_tag="RJ266_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857339.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
     gene            complement(4021..4386)
                     /locus_tag="RJ266_001297"
     CDS             complement(4021..4386)
                     /locus_tag="RJ266_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355032.1"
                     /translation="MMLFSEDMIENLCTNKIKLFSNIKDYTERKKLIEKEVLSINVPF
                     EAHCINTLHYLIYDGLSQSESSLLELLYKHNPYPCALVGGGSSGNMDFSGTFIFYNGE
                     ILKNQALSLHIQFKPKISF"
     gene            4869..5726
                     /gene="cheP"
                     /locus_tag="RJ266_001298"
     CDS             4869..5726
                     /gene="cheP"
                     /locus_tag="RJ266_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cheVAW transcriptional regulator CheP"
                     /protein_id="HDV7355033.1"
                     /translation="MIGDMNELLLKSVEVLPPLPDTVSKLRKYVSEANLNIETMKVAE
                     IISSDPLMTAKLLQLANSPYYGFTREITTINQVITLLGVGNIINIVTADSIRDNFKID
                     VSPYGLNTQNFLKTCNEEATFIANWLNDEDKKLSHLLVPCAMLLRLGIVIFSNFLIQN
                     HKDKDFLAFLNKNENLALAENEFLGVDHISFLGFLLHRWNFDDVLIESICFVRTPHAA
                     REEVKKSAYALAITDHLFAPHDGSSPFNAKAAVALLEEAKTQGINFDLNNLLSKLPSK
                     AKENLNKED"
     gene            5754..6233
                     /gene="cheQ"
                     /locus_tag="RJ266_001299"
     CDS             5754..6233
                     /gene="cheQ"
                     /locus_tag="RJ266_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cheVAW transcriptional regulator CheQ"
                     /protein_id="HDV7355034.1"
                     /translation="MMKSLILPPNEFLDHYILNTEFHRFAGISKNAYKFWKNVEIGRY
                     QGTRIIFLHRNCILEKHQQALRQCSGLNGFVLASAFCSFTGLAPSHLVEKNNSSIYKL
                     LELKEICGIKFVNLKKFYDFLGLNYHQHIYIEKCHFFSPAPFEKRIKITESMCVGYY"
     gene            complement(6202..7512)
                     /locus_tag="RJ266_001300"
     CDS             complement(6202..7512)
                     /locus_tag="RJ266_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7355035.1"
                     /translation="MSKTLNQKDIKVLGLSSLGGTLEFYDFIIFVFFANYISTNFFPK
                     DLSSFWQMFNTYGIFAAGYLARPLGGVILAHFGDKFGRKRMFMISILLMVIPTFTLAF
                     IPNYESIGFLCIVLLVFIRICQGIAIGGELPGAWVFVYEHAPQGQKRTYLGILTASVV
                     GGILLGSLVFLIMNKIYTQEELHEWAWRIPFFLGGIFGIISAYLRKFLRETPVFEQMK
                     KDKALEKFPLKEVFKKAKMGIVLSMMITWVLTGCIIVMILLMPSYMAKILQINTSIQT
                     YLQIGGILLICLGCIISGILADKIGIIKSCVFFSVFFGIASLLYFNTLYRQNTDFNLV
                     ACLYLLVCFFSGVMNFCPLIMSEVFDAKIKFSGLSFSYNIAYAIAGGLTPQLAFFLHS
                     FALNNLSNFWRFSLGVYVFFLAIIALLCAFIFSYLNNTQRTYSQ"
     gene            complement(7515..7670)
                     /locus_tag="RJ266_001301"
     CDS             complement(7515..7670)
                     /locus_tag="RJ266_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="highly acidic protein"
                     /protein_id="HDV7355036.1"
                     /translation="MAYEDEEDLNYDDYENEDEEYPQNHHKNYNYDDDDYEYDDDNND
                     DDFYEMD"
     gene            7763..8236
                     /gene="moaC"
                     /locus_tag="RJ266_001302"
     CDS             7763..8236
                     /gene="moaC"
                     /locus_tag="RJ266_001302"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HDV7355037.1"
                     /translation="MKLSHLDEKNHPKMVDVSDKNITSRIATASGMIYMSQEAFDAIK
                     NNTAKKGPVLQTAIIAAIMGAKKTSEIIPMCHPLMLSKVETDIMEFVKECAFKLIVTV
                     KCEGKTGVEMEALSGVSIGLLTIYDMIKAIDKSMRITDIVLESKEGGKSGKFVRS"
     gene            8214..8477
                     /locus_tag="RJ266_001303"
     CDS             8214..8477
                     /locus_tag="RJ266_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF493 domain-containing protein"
                     /protein_id="HDV7355038.1"
                     /translation="MVNLCDLKKEPQINYPTFWDYKVIFEVHVRASEIFQEILGQREY
                     KFEHSNSSASGKYQSYLLNVYVDSKKDRLDIFDKLKAKAKFVL"
     gene            8467..9627
                     /locus_tag="RJ266_001304"
     CDS             8467..9627
                     /locus_tag="RJ266_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355039.1"
                     /translation="MYFKKEGKMKNTLIIFENSLSNLGKDEASDLLEDLSFNLAYKQI
                     SHNPHETKKVLNSLLVEFLTILKKLDFFDDENVTKVIKALVKASIVDAQNSLYEYISE
                     AELLNKQIENQKNLIKNQISDNFFEFENILQECSFCDEFSGGLNDAILFDIEMLGILK
                     ETAESAFLTTLEKAEDIELTSSEIAKNLVYNAICEAHFEKERILKISSIILNTAFEIA
                     NESMAYAKDLCLGVIKGTRDGIVLAMEKFKASLTYANFEEDVSLKSKELIGIEDDFIA
                     LLKKEIQLQNDPCKSIVENLLEHELDNLFAKFRRLAGESREQLILVLNDIKKNPKIND
                     FNKLTQRKLNRFKQEIFELEKIASEKYKDLNSKKAKKLGIRLWEKAKKFVKK"
     gene            complement(9647..10405)
                     /gene="xth"
                     /locus_tag="RJ266_001305"
     CDS             complement(9647..10405)
                     /gene="xth"
                     /locus_tag="RJ266_001305"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HDV7355040.1"
                     /translation="MKLLSWNVNGLRAICDKNALDWIAQEKIDFIGFQEIKAHEDKFP
                     KKIYEYPFKHMYFNSAKRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALF
                     NIYFPNGQKDEERLNFKMKFYADFLVYLNKLLKDGFEIIICGDVNTAHKEIDLTHPKA
                     NANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDY
                     FFISKGLKDKLKNAFIRDDIFGSDHAPVGIEIDI"
     gene            10523..>10693
                     /locus_tag="RJ266_001306"
     CDS             10523..>10693
                     /locus_tag="RJ266_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A/FlgG phosphoethanolamine transferase
                     EptC"
                     /protein_id="HDV7355041.1"
                     /translation="MLRLTWFQFTFFNSLMIVLLNFNLFYFVYEKNTQNWFITFVFIV
                     AYFALVHVICSLL"
BASE COUNT         3829 a         1429 c         1548 g         3887 t
ORIGIN      
        1 gaagaaatta caataaacat agataagatt aaaataaatg atgactggaa agaattttta
       61 agagacgaat ttcaaaaaaa atattttcta gaaatcaaaa aacaatacct aaatgcgatt
      121 aatcaaaata tagttattta tccgcctgca aatttaatct ttaatgcttt taatttatgt
      181 cctttaaaag aaattaaaat tattatccta ggacaagatc cttatcatca accaaatcaa
      241 gcaatggggc ttagtttttc ggttccaaaa aatgtaaaaa tcccaccaag tcttaataat
      301 atttttaaag aattgcaaaa tgatttaaac atcactccag caaaaagcgg agatttaagc
      361 tcttgggcaa aacaaggagt tttgctctta aattctattc ttagcgttga agcaaataaa
      421 gcagctagcc atagttcatg gggttggcaa gaatttagtg atgctataat acataaatta
      481 agtaatgaaa aatcagggct tgtttttatg ctttggggaa attacgcaaa aaacaaggag
      541 attttgattg ataatactaa gcatttgatt ttaaaagcag ctcacccaag ccctttagct
      601 agaacaggat ttttaggttg taagcatttt tcaaaggcta atgaattttt aaaaaaagtt
      661 ggtaaaattc ctatagattg gaaaatagtt taaaaaatta ttttaaacca tcacagacat
      721 ataagagttt aaaattttat ttatatttgc ttgtttttga cgacgatcta aaaaattttc
      781 tatagagcta gaacgtagtt gatttgcttc ttctaatctt tgcgtatctt gactttggtt
      841 ttgatattgt tttttaagag catcaaaatc attgcgattt tgatcgatat aaatttgaaa
      901 tattgaactt gaatttgcaa attctcttaa atccatatct ttttggtagt taatatattg
      961 ttgaaaaaat acagatagtt tgtcttgagt gcttgttttt ttatctacgc cattaacata
     1021 gagataaaga tcaaaactca tctttttttc attttctttt ttgatgtaat cttctatatc
     1081 tgtttcgccc ttgagaattt tttgtaaatt ttgatgagag cttagttcta aagtggcagg
     1141 tttcataaaa aagttaaatt ctttttcgtt ttgagttttt atatcatggt agataaaatt
     1201 cattaaaaga ccagattttg atacttctgc atttttagtt aaataaggtt ttaaaatttc
     1261 attagaagaa gtattttcta tggctttatc aaaatgaaaa ttagttattt tattatctaa
     1321 cattaaagta tttaaatttg tgatattgct taatgccaaa tcaatttctt cttgattgtt
     1381 gtaaattctt gaaatttggc ttaaaaattc tccattatct gttgaaaaac ctgatgatag
     1441 ttttgaaata agatcgcgac ttaaataagc attatcatct tgtaaaaatt ctgaatttat
     1501 agattttaat gaactatgat agctatttaa aagataaggt agatcaattt tattgtagtt
     1561 taaattttca tcttgttttg cgagttcttt tgctatgctt ctaacgcttt taatgttgat
     1621 attataagat tctggtatat ttgcaatttt atttaaatct ttatcaaaaa aaccttcttc
     1681 attgattcta aatccaaatt cactagcata agtggtgttg ttaaaaatat agcttaattg
     1741 ttctaagcta ttttcatttc cttcttgatc taaggctttg ctatctttaa tcaaatttag
     1801 agcagagcta ttctgcaaag gattagataa ggttaaattt tgatatggat ttgccgaatt
     1861 tatagtcatt ttaaatcttt ccaaaatatt gctgattttt tataagcaaa aggtgtgcca
     1921 agttttttaa aaattaaatt cagtcaaaaa ttagaaaaaa tttgatagta tttagctttt
     1981 cttttaattt gaaaaataaa aatttatcta aataaggaaa gcgtatgcca aagatgaaaa
     2041 gcgttaaaag cgcagttaaa cgcttcaaag taggtaaaaa taaaatcaaa agaggctcag
     2101 cttttagaag tcatattttg actaaaaaac ctgcaaaaag aatgcgtgat cttcgcacag
     2161 ctaaatatgt gcatagcaca aatgtaaaag ctgttgaaaa aatgctagga atttaagttt
     2221 ttgactaaaa gtcattcaaa ctcccctctg agataaaatt tcaagggcaa gctccaaatt
     2281 tggacgccac tttatgaaag gaaataaaaa tggcaagagt aaaaacaggt gttgttagac
     2341 gccgcagaca taaaaaagtt ttaaaattag cgcgtggttt ttatagtgga cgccgcaaac
     2401 attttagaaa agcaaaagaa caattagaaa gaagtcttgt ctatgcttat cgtgatagac
     2461 gtcgtaaaaa aagagacttc cgtcgtcttt ggattgtgcg tatcaatgct gcttgcagac
     2521 tcaatgattt aagttattca agatttatca atggtcttaa aaaagcaggc attgaacttg
     2581 atagaaaaat tctagcagat ttagctatga atgatgctgc tgcttttgca aaaattgcag
     2641 aggccgcaaa aaaagcactt tgatttttta gtgtaagaat ttcaagattt ttgattcttg
     2701 aaattcttaa ttttttagta ttgatttaat ttagctagaa catcttcata acatttgagt
     2761 ttatttacat ttttttcaaa atcttcgctg acattgcttc tttgttctaa tttatctgaa
     2821 atttctttac ctgaatttat aagatttgaa atgattttgg aaaattcatt agatttatct
     2881 cttataaaat tcatttcttg agtactagaa ttggagcttt ttgcaatgga ttgtatggtc
     2941 tgaataacta atttgatagc tccttccatt tcacctagac ccatttgggt attttctgaa
     3001 agttttctaa cttcatcagc tacaactgca aatccacgac caagttttcc agctctagca
     3061 gcttctatac ttgtatttaa agataaaagg ctagtttgtt cagcaatccc tgaaataaga
     3121 tctaaaatac tatttaattg atctatattt tcaaagaaga ttgtacttct ttttctaaat
     3181 tcattttttc ttcgctttgg taaaggttgt attctaggta gttagtgaaa ttagtaaaac
     3241 tttcactaat ggttgtaaga cttcttctta tattttcaag tttttcaaaa atttctttaa
     3301 atatgcttgt atttttatca atttctgatg tattttgttt gagttgattt aagattattt
     3361 tattttaatc tcatttgtaa tttctagttt ttgagctctt atattaagat aatagtattt
     3421 aaaatcgctg tatttttgta tgaaagtttt taaatatcta ggtttgaaat cattaaaatt
     3481 ttcaacttca taaaaaaata ttgccactaa actttttgca attcccactc cataaatttc
     3541 tccaaaacta gaaaaaccaa ctataggaaa atcattaaaa tggatttgat ttaaatgttc
     3601 tttgttgtga agccttctta agatacaatc gttaaaaatt gctcctagtg attttggttt
     3661 attaagagaa aatttttcat aatctttttt atagcttcaa taaaatttgt ttttttaagc
     3721 aagcataatt cttgagcgct ttctatatca caataactaa ataatgtttt atctgggttg
     3781 atttccatag gggaaataag atagtcttct ccaattttta aagcaaaagt atattcttgc
     3841 attttatttt taagttcttc aaaagtgcag ttaaaataat tacataaagc ttcaaccgcg
     3901 ttgatggatt gaaaggtttt tttatcaata aattcatgta tggttttatc atataaactt
     3961 gcatcaagta tggtaaaggt gatattgctt tgaggattaa aattttgaga cttcattaaa
     4021 tcaaaacgat attttaggtt taaattgaat atgtaagctt aaagcttgat tttttaatat
     4081 ttctccatta taaaatataa atgttccgct aaagtccatg tttccgctag atccaccccc
     4141 tactaaagca caaggatagg gattgtgttt gtataaaagt tctaaaagag aactttcgct
     4201 ttgacttaaa ccatcataaa ttaaataatg caaagtattt atgcagtgtg cttcaaaagg
     4261 tacatttata gataaaactt ctttttctat cagttttttt ctttctgtat aatcttttat
     4321 attgctaaaa agcttgattt tgtttgtgca aagattttct atcatatctt cactaaaaag
     4381 catcaaactt attccttgga tattttgttt ataaggactg ttttcaatgt ttgagttaga
     4441 atcaaggttg cataataaat cagtagcact gcttaagatg atatcacatt gatcatttat
     4501 agaattttga atcttatttc ctatgatcgc tagattaagt tgatcgacac aaagcctata
     4561 attaattttg gcttgatatt tatttttttt aatttttatt caagttcatt ttcttgaaga
     4621 tatagagctt ctaaaacttt tttactttct tctttttttg ttgagctttt atttttaaaa
     4681 ttaaaaaaca tcaatttaac tccattaaaa ctatttttta attactagtt aactaaatca
     4741 agacaccata aattcggcat ttatttgtaa tttttattat accttaagta ataaaaaaat
     4801 gcaataagta aattaaaatt tagatataat tccaaattat aataatatta attaaggata
     4861 aatcaaatat gattggagat atgaatgagc ttttattaaa aagcgttgaa gtattgccac
     4921 ctttacctga tactgtaagt aagttaagaa aatatgtgag cgaggctaat ttaaatatag
     4981 aaactatgaa agttgctgaa atcatttcaa gcgatccgtt gatgacggct aagcttttgc
     5041 aattagcaaa ttctccttat tatggtttta caagagaaat tacaaccata aatcaagtga
     5101 ttactttatt aggcgttggt aatatcatca atatagttac ggctgattcc attagagata
     5161 attttaaaat agacgtttca ccttatggtt taaatactca aaatttttta aaaacgtgca
     5221 atgaagaggc aacttttatc gcaaattggc ttaatgatga agataaaaaa ctttctcatc
     5281 ttttagttcc ttgtgcaatg cttttaaggc ttggtattgt tattttttca aattttctta
     5341 tacaaaatca taaggataag gattttttag cttttttaaa taaaaatgaa aatcttgctt
     5401 tagcggagaa tgaattttta ggcgtagatc atatttcttt cttgggattt ttgttacatc
     5461 gttggaattt tgatgatgtt ttgattgaaa gtatatgttt tgttcgcact cctcatgctg
     5521 ctcgcgaaga agtgaaaaaa tccgcttatg ctttagcaat aacagatcat ctttttgctc
     5581 cgcatgatgg ctcttctcca tttaacgcaa aagctgcagt tgctttactt gaagaggcaa
     5641 aaactcaagg aattaatttt gatttaaaca atcttttatc taagcttcct agcaaagcta
     5701 aggaaaattt aaacaaagaa gattaaagag cctttttaag gctctaaatt gtagtgatga
     5761 aaagtttaat cttacctcct aatgaatttt tagatcacta tattttaaac accgaatttc
     5821 atcgttttgc tggaatttca aaaaatgctt ataaattttg gaaaaatgta gaaataggta
     5881 gatatcaagg aacaagaatt atatttttgc atagaaattg cattttagaa aaacatcagc
     5941 aagctttaag gcaatgtagt ggtttaaatg gttttgtatt ggcaagtgct ttttgttctt
     6001 ttactggatt agccccctct catttagtgg aaaaaaataa ttcttctatt tataaacttt
     6061 tagagcttaa ggaaatttgt gggattaaat ttgttaatct aaaaaaattt tatgattttt
     6121 tagggctaaa ttatcatcag catatttata tagaaaaatg ccattttttt agcccagctc
     6181 cttttgaaaa gcgtattaaa atcactgaga gtatgtgcgt tgggtattat taagataaga
     6241 aaaaataaat gcacatagca aagctataat agccaaaaag aaaacataaa ctcccaaaga
     6301 aaaacgccaa aaattactta aattatttaa ggcaaaacta tgcaagaaaa aagcaagttg
     6361 cggagttaaa cctccagcta tagcataagc aatattatat gaaaaggaaa gtcctgaaaa
     6421 tttaattttt gcatcaaata cttcactcat tattaaaggg caaaaattca tcactccgct
     6481 aaaaaaacat acaagtaaat ataagcaagc tactaggtta aaatcagtat tttgtctata
     6541 tagagtatta aaataaagca agctcgcaat tccaaaaaaa acactaaaaa atacacaaga
     6601 tttgataatg cctattttat ccgctaaaat tccacttata atacacccta ggcaaataag
     6661 taaaattcca cctatttgaa gataggtttg tatagaagtg ttaatttgaa gtatttttgc
     6721 catatagcta ggcataagca aaatcattac aataatacaa cctgtcaaaa cccaagtaat
     6781 catcatagaa agaacaattc ccattttagc ttttttaaac acttctttta aaggaaattt
     6841 ttctaaagcc ttgtcttttt tcatttgttc aaaaacagga gtttctctta aaaattttct
     6901 caaataagca gaaataatcc caaaaattcc acctaaaaag aatggaattc tccaagccca
     6961 ttcatgaagt tcttcttggg tataaatttt attcataatt aaaaaaacta aactacctaa
     7021 taaaattcca cctacaaccg aagcggttaa aattcccaaa taagttcttt tttgaccttg
     7081 tggtgcgtgt tcgtatacaa aaacccaagc tccaggaagt tccccaccta tagctatacc
     7141 ttgacaaatg cgtataaaaa ctaaaagcac aatacaaaga aaacctatgc tttcataatt
     7201 tggaataaaa gctagagtaa aagttggaat aaccattaac aaaatactaa tcataaacat
     7261 tcttttgcgt ccaaatttat ctccaaaatg tgccagtatc acacccccta agggacgcgc
     7321 taaatatcca gccgcaaata ttccataagt attaaacatt tgccaaaaac tacttaaatc
     7381 ttttggaaaa aagtttgttg aaatataatt tgcaaaaaat acaaaaataa taaaatcata
     7441 aaattctaaa gttccaccta atgatgaaag tcctaaaact tttatatctt tttggttaag
     7501 ggttttgctc attcttaatc catctcataa aaatcatcat cattgttatc atcatcgtat
     7561 tcataatcat catcatcgta attataattt ttatgatgat tttgtggata ttcttcatct
     7621 tcgttttcat aatcatcgta atttaaatct tcttcatctt cataagccat tgttttctcc
     7681 ttaaataaaa atacaaagct tattttatct taaatttgtt tggttttgct ataattttta
     7741 taatttttta aaaggtgaat ttatgaaatt aagtcattta gatgaaaaaa atcatcctaa
     7801 aatggtagat gtaagcgata aaaatattac ttcaagaata gccacagcta gtggtatgat
     7861 atatatgagt caagaagctt ttgatgcaat taaaaacaat accgcaaaaa aaggtcctgt
     7921 tcttcaaaca gctattattg cggctataat gggagctaaa aaaacaagtg aaattattcc
     7981 tatgtgtcat cctttgatgc tttctaaagt cgaaactgat attatggaat ttgttaaaga
     8041 atgtgcattt aagcttattg taacagttaa gtgtgaaggt aaaacagggg ttgaaatgga
     8101 agctttaagt ggagttagta taggactttt aactatatat gatatgatca aggctataga
     8161 taaatcaatg aggattacgg atatagtgct tgaaagcaaa gaaggaggta aaagtggtaa
     8221 atttgtgcga tcttaaaaaa gaacctcaga tcaattatcc tactttttgg gattataagg
     8281 tgatttttga ggtgcatgtt agggcaagtg aaatttttca agaaatttta ggccaaagag
     8341 aatataaatt tgaacattcg aattcaagtg cgagtggaaa atatcaaagt tatttattaa
     8401 atgtttatgt tgatagcaaa aaagatcgtt tggatatatt tgataaatta aaagctaaag
     8461 caaaatttgt actttaagaa agaaggaaaa atgaaaaata ctttaattat ttttgaaaat
     8521 tctttatcaa atctcggtaa agatgaagca agtgatttgc ttgaagactt gagttttaat
     8581 cttgcgtata agcaaatttc acataatcct catgaaacaa aaaaagtttt aaattctctt
     8641 ttggttgaat ttttaactat tttgaaaaaa cttgattttt ttgatgatga aaatgttaca
     8701 aaggttatca aagctttggt taaggcgagt attgtagatg ctcaaaattc gctttatgag
     8761 tatattagcg aagctgaatt attaaataag cagattgaaa atcaaaagaa tttgattaaa
     8821 aatcaaatca gtgataattt ttttgaattc gagaatattt tacaagaatg ttctttttgt
     8881 gatgaattta gcggtggttt aaatgatgct attttatttg atatagaaat gcttggaatt
     8941 ttaaaagaaa ccgctgaaag tgctttttta actacattag aaaaggctga agatatagaa
     9001 cttacaagta gtgaaatagc taaaaatctc gtatataatg ccatttgtga agctcatttt
     9061 gaaaaagaaa gaattttaaa aatttcaagt attattttaa ataccgcttt tgaaatagct
     9121 aatgaatcta tggcttatgc aaaagatctt tgtttaggcg tgattaaagg cacaagagat
     9181 ggtattgttt tagcaatgga aaaatttaaa gcttcattaa cttatgcaaa ttttgaagaa
     9241 gatgttagtt taaaaagcaa agaactaata ggtatagaag atgattttat tgctcttttg
     9301 aaaaaagaga ttcaactaca aaatgatcct tgtaagagta tagttgagaa tttgctagaa
     9361 catgaacttg ataatctttt tgctaaattt agacgtcttg caggtgaaag cagagagcag
     9421 ctaatattag ttttaaatga tattaagaaa aatccaaaga ttaatgattt taacaaactt
     9481 actcaaagaa aattaaatcg ttttaaacaa gaaatttttg aattagaaaa aattgctagc
     9541 gaaaaataca aagatttaaa ttccaaaaaa gctaaaaagc tcggtataag actttgggaa
     9601 aaagcaaaaa aatttgttaa aaaataatat cccatttttt gggatattaa atatctattt
     9661 ctatacctac aggtgcgtga tcagagccaa aaatatcatc tcttatgaaa gcgtttttaa
     9721 gtttatcttt taaacccttt gaaatgaaaa aataatcaat cctccagcct acatttcttt
     9781 ctcttgcttt cattctatag ctccaccacg agtatttttc tttgatttca ccattaattt
     9841 ctctaaaagt atctataaaa ccaagtttta gcaaatcatc aatccaagct ctttctatag
     9901 gtaaaaaacc tgaagtgttg gcattggctt ttgggtgggt aagatcgatt tctttatgag
     9961 cggtgttgac atcaccacaa atgataattt caaatccatc ttttaaaagc ttatttaaat
    10021 acactaaaaa atctgcataa aatttcattt taaaatttaa acgctcttca tctttttgac
    10081 catttggaaa atagatatta aaaagcgcga tatttttaaa gcggtgttcc aaaaccctgc
    10141 cttcttcatc atcaaaaaat tcacattttt ttacttcgct atcaaaatta caaagactca
    10201 ttaccccaga ataccctgct cttttagcag aattaaaata catgtgttta aaaggatatt
    10261 cataaatttt tttaggaaat ttatcttcat gtgctttgat ttcttgaaaa cctataaaat
    10321 caattttttc ttgtgctatc caatcaagtg catttttatc acaaatagct cttaagccat
    10381 tgacattcca tgaaagtagt ttcattattt tccttaaaat tttcattaaa agtgtaaatc
    10441 ataacataaa aagatttaaa actacaatcc atttaaaaaa attcaataaa attaaaagct
    10501 taaatttgaa ggtgggattt atatgcttag attaacttgg tttcagttta ctttttttaa
    10561 ttctttgatg attgtattat tgaattttaa tttattttat tttgtgtatg aaaaaaatac
    10621 acaaaattgg tttataactt ttgtttttat tgtggcctat tttgcacttg ttcacgtgat
    10681 ttgctctttg ctt
//
LOCUS       DAPIWB010000055        10486 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.056, whole genome shotgun sequence.
ACCESSION   DAPIWB010000055 DAPIWB010000000
VERSION     DAPIWB010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10486)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10486)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10486
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.056"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            231..503
                     /locus_tag="RJ266_001307"
     CDS             231..503
                     /locus_tag="RJ266_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HDV7355042.1"
                     /translation="MMPFSDEELINPVKASLEKSLPMLERDGGGLEFLGIKNGIVYVH
                     LIGACKGCASSGTTLKYGLERQLKIDIHPEITIINLNGGADEFAKL"
     gene            490..1041
                     /locus_tag="RJ266_001308"
     CDS             490..1041
                     /locus_tag="RJ266_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HDV7355043.1"
                     /translation="MQNYKKLGIEHFYKKDFKTAKMYFSMAYEKRKNKRLLNFICLCD
                     LALKSPKEASLLFDFYIEHYKISSIDKDLEEILSTIEFKKQENKQENEFEDGHALNYQ
                     DFLKSEEELGFQKSFENIINSTKLVIDNRDDFLDFLEKLLDNGYKDMTLNYIENVMPH
                     FWANDRFIKLQEKLMGFKSEIKT"
     gene            1025..2308
                     /locus_tag="RJ266_001309"
     CDS             1025..2308
                     /locus_tag="RJ266_001309"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HDV7355044.1"
                     /translation="MKLKLENSFITDNTLECEKECFFLQTTQNAKFHAQALEKGAKII
                     DVNECKKLLKIDEKIQIIGITGTNGKTTTAAAIYSILLDLGYKCGLCGTRGAFINDEQ
                     IDEKSLTTSPILKTLEYLQIATQKKCDFFIMEVSSHALVQNRIEGLNFAAKIFTNITQ
                     DHLDFHGTFENYKEAKELFFTDESLKFINKDALAIKFNVRNAFTYGIENPALYQIKAY
                     SLEEGISAIVTNKNQTFHIDSPLLGLFNLYNLLVASACVNELVKPDLKDLEKAISGFG
                     GVCGRVEQVAKGVIVDFAHTPDGIEKVLDTLKNKKLIVVFGAGGDRDKTKRPLMGKIV
                     EHFAKIAIITSDNPRSEEPKTIIEEILSGFTKKEKVLMIEDRKEAIKKALELKENDDL
                     VVILGKGDETTQEIKGIKYPFSDKVVVNEILKNQG"
     gene            2312..2623
                     /locus_tag="RJ266_001310"
     CDS             2312..2623
                     /locus_tag="RJ266_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HDV7355045.1"
                     /translation="MFENMDFSKMGELLNQVQEKAKNIELELANREFSAKSGAGLVKV
                     SANGKGEIIDVSIDDSLLEDKESLQILLISAINDVLAMVAQNRSSMANDVLGGFGGMK
                     L"
     gene            2620..3714
                     /locus_tag="RJ266_001311"
     CDS             2620..3714
                     /locus_tag="RJ266_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HDV7355046.1"
                     /translation="MKKILIICMLFTLSFGIERPKFEDFLAGYERNKASMLNYEGMPA
                     FALSENLLAVLKQPNAKLNKYVKYDPFLNLYLVRTDFSLIPTPMGDEEKLTRNDWVGI
                     WDPNKPYIGHIKYLAQNIDEKDQLDFNSKIGLLGTPCCEMMGIALNNSSFIGNRYLKH
                     FMKYNDVYWGDIGVDFVVRENKIYVNNVRKNPQFLINDQVISVDGLPANDLRKLNEKI
                     LFADRGSTLYFQVLRDNMDLNISTEVFAKDLSKFNLPDSKPKPKITNFTSNLGLTVNT
                     SLVVTKIDPKSKASNAGFMVGDKILRVNNIILNNFKELQNILSAGNDFSILIERKSTK
                     LPLSNFNNELGGNANSGGDGKFQFFIRLTK"
     gene            3711..4556
                     /locus_tag="RJ266_001312"
     CDS             3711..4556
                     /locus_tag="RJ266_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HDV7355047.1"
                     /translation="MNLKELFIHHLEKNLPKVESFHPFFNEALALMLKAGGKHFRAQL
                     LLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDET
                     TAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDCFFEDKRL
                     SLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDDIIDV
                     TTSQEQSGKPTNNDIHKNSFVNLLGLEQAIKTKENLLSECEQDLEKLNEKLAQMIQNL
                     IIQYL"
     gene            4567..6465
                     /gene="tkt"
                     /locus_tag="RJ266_001313"
     CDS             4567..6465
                     /gene="tkt"
                     /locus_tag="RJ266_001313"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HDV7355048.1"
                     /translation="MNIQILQEQANTLRFLSADMVQKANSGHPGAPLGLADILSVLSY
                     HLKHNPKNPTWLNRDRLVFSGGHASALLYSFLHLSGYDLSLEDLKNFRQLHSKTPGHP
                     EISTLGVEIATGPLGQGVANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGIS
                     YEACSLAGLHKLDNFILIYDSNNISIEGDVGLAFNENVKMRFEAQGFEVLSINGHDYE
                     EINKALEQAKKSTKPCLIIAKTTIAKGAGELEGSHKSHGAPLGEEVIKKAKEQAGFDP
                     NISFHIPQASKIRFESAVELGDLEEAKWKDKLEKSAKKELLERLLNPDFNKIAYPDFK
                     GKDLATRDSNGEILNVLAKNLEGFLGGSADLGPSNKTELHSMGDFVEGKNIHFGIREH
                     AMAAINNAFARYGIFLPFSATFFIFSEYLKPAARIAALMKIKHFFIFTHDSIGVGEDG
                     PTHQPIEQLSTFRAMPNFLTFRPADGVENVKAWQIALNADIPSAFVLSRQKLKALNEP
                     VFGDVKNGAYLLKESKEAKFTLLASGSEVWLCLESANELEKQGFACNVVSMPCFELFE
                     KQDKAYQERLLKGEVIGVEAAHSNELYKFCHKVYGIESFGESGKDKDVFERFGFSVSK
                     LVNFILSK"
     gene            6467..7576
                     /locus_tag="RJ266_001314"
     CDS             6467..7576
                     /locus_tag="RJ266_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7355049.1"
                     /translation="MNTNFKFQNNTLFIFGIWDKTSIYKLKIKDFLALIQSKEVIFDF
                     KDLKAIDTAGVRFFLALENDLKNKNIKITKEGLNSRFQTLFELCEKNYQRLGKTKKSH
                     KNFSEYFIDLGKLSLELLKILRKFINFTGAFFTSLFLCLKNPKNFRFIAFLYHIENSA
                     FKALPIVILTALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAG
                     RSASSYTAQIGVMKITDEIAAMNTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISII
                     GGMMVAKLNLDISFAEFLRRFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNT
                     TQSIGIYTTKSVVNAIFWVIAFDALFSVILTSTGI"
     gene            7577..8299
                     /locus_tag="RJ266_001315"
     CDS             7577..8299
                     /locus_tag="RJ266_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDV7355050.1"
                     /translation="MVIKAQNIITKFGEKIVHDGVSFEIKKNEIFGILGGSGSGKSVL
                     LKQMLMLEHFDGGEYEILGYKLKNINEEDALALRKKWGVVFQFAALFSFFNIYENIAI
                     PLKEYTHLDENSIQELVLMKLKMVGLNESVLKQFPSELSGGMQKRVAIARALALDSKL
                     LFLDEPTSGLDPHSSREFDDLVLELKKSFDLNIILVTHDKESMKNLLDRFIILENKKV
                     GFCGTYEELRLQNERLFKRFME"
     gene            8302..9192
                     /locus_tag="RJ266_001316"
     CDS             8302..9192
                     /locus_tag="RJ266_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCE family protein"
                     /protein_id="HDV7355051.1"
                     /translation="MENRANYFFVGLFVFGVFFASLGFILWLGGYSKEESFKYYEIHT
                     QESVAGLGIKAPVRLLGVEVGSVEEISIYNQDELGVNIRIKVKNNTPIKEDTFATLQL
                     QGITGLKFVQLQGGSKNSKDLVSIQGKLPVIPFKESFLATIDRQSEHIFSLVKTADDK
                     SKELLSEKNLKNLEILLQNLAELSANLNANSKNLSLNLSNTSLKIGKMADNISLSAQN
                     FNSSLKNIKESTMILKNFIKKADEKLNTYDDIKASLMQNLELFKRVLIESNILIENLQ
                     NSPADLIFKETKPKLGPGEK"
     gene            9192..9791
                     /locus_tag="RJ266_001317"
     CDS             9192..9791
                     /locus_tag="RJ266_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HDV7355052.1"
                     /translation="MLKQLFCILTFIFMLCGCSLRHETINKNENIILKDEGIDSNIFF
                     KKTGKILKIRNTNAPLYLNSRAIVYIDNGFSNKYAHYFWGDLPSNLYSFLILSKFEQS
                     NIFTTLLSSTSSLSADYALESRINSFEQILNNNENYAQISISVNFINLENNQIIAHKI
                     FNTKEKIEKKDIRSTYNAFQKALNKIGNEIVFWVNSNLS"
     gene            9847..10347
                     /locus_tag="RJ266_001318"
     CDS             9847..10347
                     /locus_tag="RJ266_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355053.1"
                     /translation="MKSDLDIFKKHLGEIQGVNEFKANQICSQINDANDFIGALQVLD
                     MSLKKIEKSILERIDENSDDMQKRTLDATASQLIQNCSFMGTALFGNIFNVYVGKKLF
                     EFEIANPLLILQTSNYEGVLAYIQDKRDEIKIILSELATAITMGETMDNAGIYNSTMD
                     FKNLFK"
BASE COUNT         3880 a         1511 c         1777 g         3318 t
ORIGIN      
        1 taaaagaata tttaagcttc ttaaaatatg aaaaaaacga agaaattctg caacaatcat
       61 ttagaaactt aaatggaatt tttggtaaca aaaactttac agcttatgat ttaggattta
      121 gcatacaaaa taatgacgaa cctttttaat ttatttaaat ttcaagcctt aatttacctt
      181 tttttaaaca caatcacgct aaagtatata aaaattttta aggataaatt atgatgcctt
      241 ttagtgatga agagcttata aatcctgtta aagcaagttt agaaaagagc ttgcctatgc
      301 ttgaacgtga tggcggaggg cttgaatttt taggaattaa aaatgggatc gtttatgtcc
      361 atttaatagg agcttgtaaa ggctgtgcat cgagtggaac aacgctaaaa tacggtcttg
      421 aaaggcaact taagattgat attcatccgg aaatcactat aatcaattta aacggcggag
      481 cagacgaatt tgcaaaatta taaaaaactt ggaattgaac atttttacaa gaaagatttt
      541 aaaactgcaa aaatgtattt ttctatggct tatgaaaaac gcaaaaataa acgcttgcta
      601 aattttatct gcctttgtga tcttgcttta aaatctccta aagaagcttc tttacttttt
      661 gatttttata tagaacatta caaaatctct agcattgata aagacttaga agaaatttta
      721 agtacaattg aatttaaaaa acaagaaaac aaacaggaaa acgaatttga agatgggcat
      781 gcgttaaatt atcaagattt tttaaaaagc gaagaagaac ttggctttca aaaaagtttt
      841 gaaaatatca ttaacagcac taaattagtt attgataatc gtgatgattt tttagatttt
      901 ttggaaaaat tacttgataa tggctataaa gatatgactt taaattatat agaaaatgtt
      961 atgcctcatt tttgggcaaa tgatagattt atcaaactcc aagaaaaact catgggattt
     1021 aaaagtgaaa ttaaaacttg aaaattcatt cattacagat aacaccttag agtgtgaaaa
     1081 agaatgcttt tttttgcaaa ccacacaaaa tgctaaattt cacgctcaag ccttagaaaa
     1141 aggtgcaaaa atcattgatg taaatgagtg taaaaaactt ttaaaaatcg atgaaaagat
     1201 tcaaatcata ggaatcacag gaaccaatgg caaaaccaca accgcagcag cgatttattc
     1261 tatcttattg gatttaggtt ataagtgtgg gctttgtggg acaagaggag cttttatcaa
     1321 cgatgaacaa atcgatgaaa aatccttaac cacctcccct attcttaaaa ccttagaata
     1381 cctacaaata gccactcaaa aaaaatgtga ttttttcatc atggaagtaa gctcacacgc
     1441 actcgttcaa aaccgcatcg aaggcttaaa ttttgctgct aaaattttta ccaatatcac
     1501 tcaagatcat ttagattttc acggtacttt tgaaaattat aaagaagcaa aagaactttt
     1561 ttttaccgat gagagtttaa aatttatcaa caaagatgct ttggctatta aatttaatgt
     1621 gcgtaatgct tttacttatg gcatagaaaa tcctgcttta tatcaaatca aagcttattc
     1681 tttagaagaa ggcattagtg ctattgtaac aaataaaaat caaacttttc acatagactc
     1741 gcccttgcta ggacttttta atctttacaa tcttctagtt gctagtgctt gtgtgaatga
     1801 actcgtaaag cctgatttaa aagacttgga aaaagctatc agtggatttg gcggggtttg
     1861 tggcagggta gaacaagtag caaaaggtgt gattgtagat tttgctcata cgcctgatgg
     1921 cattgaaaaa gtgcttgaca ctcttaaaaa taaaaaactc atcgttgttt ttggagcagg
     1981 tggagataga gataaaacca aacgcccttt aatgggaaaa atcgtcgaac attttgcaaa
     2041 aattgctatc attacaagtg acaatccacg cagcgaagaa ccaaaaacca tcatagaaga
     2101 aattttatca ggctttacta aaaaagaaaa agttttaatg atagaagata gaaaagaagc
     2161 tataaaaaaa gctttagaac taaaagaaaa tgacgattta gtcgttattt taggcaaagg
     2221 tgatgaaact actcaagaaa ttaaagggat aaaatatcct tttagtgata aagtagttgt
     2281 taatgaaatt ttaaaaaatc aaggataatc aatgtttgaa aatatggatt tttctaaaat
     2341 gggagaactt ttaaatcaag ttcaagaaaa agcaaaaaat atagaactag aacttgcaaa
     2401 tcgtgaattt agtgccaaaa gcggagcagg acttgttaaa gtaagtgcca atggaaaggg
     2461 tgaaattatc gatgttagca ttgatgattc tttacttgaa gataaagaat ccttgcaaat
     2521 tttacttatt tctgcaatta atgatgtttt ggctatggtt gcacaaaatc gttcaagtat
     2581 ggcaaatgat gttttaggcg gttttggagg tatgaaatta tgaaaaaaat tttaattatt
     2641 tgcatgcttt ttactttgtc ttttggtata gaaagaccta aatttgaaga ttttttagca
     2701 ggttatgaaa gaaataaggc aagcatgctc aactatgaag gaatgccagc ttttgcactc
     2761 agtgaaaatt tacttgctgt gttaaaacag cctaatgcta agcttaacaa atatgtaaaa
     2821 tacgatccat ttttaaattt atatcttgta agaactgact ttagcctaat ccctactcct
     2881 atgggtgatg aagaaaaact tactcgtaat gattgggttg gaatttggga tcctaataaa
     2941 ccttatatag ggcatattaa gtatttagct caaaatattg atgaaaaaga tcaacttgat
     3001 tttaattcta aaataggact tttagggact ccatgctgtg aaatgatggg gattgcttta
     3061 aataatagct cttttatagg caatcgctat ttaaaacatt ttatgaaata taacgatgtt
     3121 tattgggggg atattggcgt tgattttgtt gttcgagaaa ataaaattta tgttaacaat
     3181 gtaagaaaaa atccacaatt tttaatcaat gatcaagtta taagtgttga tggcttaccc
     3241 gccaatgatt taagaaaact caatgaaaaa attctttttg cagatcgcgg aagcactctt
     3301 tattttcaag tgttgcgtga taatatggat ttaaatattt ctactgaagt ttttgcaaaa
     3361 gatttgagca aatttaacct tcctgattct aaaccaaaac caaaaattac aaatttcaca
     3421 agcaatcttg gtttaacggt taatactagt cttgttgtaa ctaaaataga tccaaaatca
     3481 aaagcatcaa atgcaggatt tatggtagga gataaaattt tacgcgttaa taatattatt
     3541 ttaaataatt ttaaagaatt acaaaatatt ttaagtgctg gtaatgactt tagcatctta
     3601 attgaacgca aaagtactaa attaccttta tcaaatttca acaatgaact aggcggaaat
     3661 gccaactcag gtggcgatgg taaatttcaa tttttcataa ggcttactaa gtgaatttaa
     3721 aagaactttt tatccatcac ttagaaaaaa atctacccaa agttgaaagc tttcatcctt
     3781 ttttcaatga agctttagca cttatgttaa aagcaggagg aaagcatttt cgcgcacaat
     3841 tgcttttaag cgtagtgcaa agcaataaac ctgaactttt aaatcaagct ttagatgtag
     3901 ctttagcttt ggaatttatc catacttatt cactcataca cgatgattta cccgctatgg
     3961 ataatgcgga ctttagacga ggaattccaa ccttacacaa aagctacgat gaaactacag
     4021 ccatcttagt aggtgatgct ttaaataccg aagctttttt agttctaagt catgctcatt
     4081 taaaagatga aatcaaaatc aaactcatca aaacccttgc ctttaatgca ggacttaatg
     4141 gaatggtcat aggacaagct attgattgtt tttttgaaga caaaagactg agtttaaatg
     4201 aacttgagtt tttgcataca cataaaaccg caagattgat cgctgcagct ttaaaaatgg
     4261 gttgtgaaat ttgcgaactt aacaacgaag aaagcaatca aatttacaaa cttggtttaa
     4321 aactaggact gatttttcaa atcaatgatg atattatcga tgtaactaca agtcaagaac
     4381 aaagcggaaa gcctaccaac aacgatattc ataaaaattc ttttgtcaat ttgcttggac
     4441 ttgaacaagc cataaaaaca aaagaaaatc ttcttagtga atgcgaacaa gacttagaaa
     4501 aacttaatga aaaactcgca caaatgatac aaaatttaat aattcaatac ttataaaggc
     4561 aaaataatga acattcaaat tttacaagaa caggcaaata ctctaagatt tttaagtgct
     4621 gatatggtgc aaaaagcaaa ctcaggacac ccaggtgcac ctttgggctt agcagatatt
     4681 ttaagtgttt taagttatca tttaaaacac aatcccaaaa atccaacttg gctaaaccga
     4741 gatagacttg tattttcagg cggacatgca agtgctttgc tttatagttt tttacattta
     4801 agcggctatg acttaagctt agaagatctt aaaaatttcc gccaacttca ttctaaaacc
     4861 cctggacacc ctgaaatttc aactcttgga gtagaaatcg ctacaggccc tttaggacaa
     4921 ggcgttgcca atgctgtagg ctttgctatg gcagcaaaaa aagcacaaaa tttgctaggc
     4981 agtgatttaa tcgatcataa aatttattgt ctttgcggag atggggattt acaagaaggc
     5041 atttcttatg aagcttgttc tttagcagga cttcacaaac ttgataactt catacttatt
     5101 tatgatagca acaatatctc catagaaggc gatgtaggtt tagcctttaa cgaaaatgta
     5161 aaaatgcgtt ttgaagcaca aggatttgaa gttttaagta taaatggaca cgattatgaa
     5221 gaaatcaata aagccttaga acaagctaaa aaatccacaa aaccttgtct tatcatcgca
     5281 aaaacaacta tagcaaaggg tgcaggagag cttgaaggca gtcataaaag ccatggcgca
     5341 cctttgggtg aagaagtgat taaaaaagcc aaagaacaag caggctttga tccaaatatc
     5401 agttttcata tcccacaagc aagcaaaatc cgctttgaaa gtgctgtaga acttggggat
     5461 ttagaagaag caaaatggaa agataagctt gaaaaaagtg ctaaaaaaga acttttagaa
     5521 aggctattaa atcctgattt taacaagata gcttatcctg attttaaagg aaaagatctt
     5581 gctacaagag atagtaatgg tgaaatttta aatgttttag ctaaaaattt agaaggattt
     5641 ttaggtggaa gtgcagactt aggcccttcg aataaaacag aacttcacag tatgggagac
     5701 tttgtagaag gtaaaaatat ccattttggt atcagagaac acgctatggc agcgattaac
     5761 aatgcttttg caagatatgg aattttctta ccattttcgg caactttttt catctttagc
     5821 gagtacttaa aacctgccgc aagaatagca gctctaatga aaatcaaaca ttttttcatt
     5881 ttcacacacg atagcatagg cgtgggcgaa gatggaccaa cacaccaacc tatagaacaa
     5941 cttagcactt ttagagctat gccaaatttt ttaaccttta gacctgctga tggggtggaa
     6001 aatgtcaaag cttggcaaat agccctaaat gctgatattc cgagtgcttt tgtgctttca
     6061 cgccaaaaac tcaaagctct aaatgaacct gtttttggag atgtaaaaaa cggagcgtat
     6121 ttactcaaag aaagcaaaga ggctaaattt acacttctag caagtggaag tgaagtttgg
     6181 ctttgtctag aaagtgcaaa cgaacttgaa aaacaaggtt ttgcttgtaa tgttgtttcc
     6241 atgccttgtt ttgaactttt tgaaaaacaa gataaagctt atcaagaaag attgttaaaa
     6301 ggtgaagtta taggtgttga agcagcacat tctaatgaac tttataaatt ttgccataaa
     6361 gtatatggca tagaaagttt tggagaaagt ggtaaagaca aagatgtgtt tgaacgcttt
     6421 ggatttagcg tttcaaagct tgtaaatttt atccttagca aataaaatga atacaaattt
     6481 caaatttcaa aataatactc tttttatctt tggaatttgg gataaaacaa gtatttataa
     6541 gttaaaaata aaagattttt tagctttgat ccaaagcaag gaagtgattt ttgattttaa
     6601 agatctaaaa gcaatcgata ccgctggagt gagatttttc cttgctttgg aaaatgacct
     6661 taaaaataaa aatattaaaa tcaccaaaga aggcttaaat tcacgctttc aaaccctttt
     6721 tgaactttgt gaaaaaaact accaaagact aggcaaaaca aaaaaatcac ataaaaattt
     6781 cagtgaatac tttatcgatc ttggaaaatt aagtttagaa cttttaaaaa ttttaagaaa
     6841 attcatcaat ttcacaggag cttttttcac aagtcttttt ttatgcctca aaaatcctaa
     6901 aaattttcgc tttattgctt ttttatatca tatagaaaat tctgctttta aagccttgcc
     6961 tatagttatt ttaaccgctc ttttagtagg agtggtttta gcctatcagg ctgcttatca
     7021 actcgcacaa tttggagcca atattttcat agtggatttg atgggaattt cagccactag
     7081 agaacttgca cctttaatcg ctgccatagt gatcgcagga agaagtgcaa gctcttatac
     7141 cgcacaaatt ggggtgatga aaattactga tgaaattgca gctatgaata ctatgggttt
     7201 tcgttctttt gaatttatta ttattccacg tgtcatggct ttggtagtag ctatgccttt
     7261 aatcgttgcc attagcgatg caatcagtat tataggtgga atgatggttg caaaattaaa
     7321 tcttgatatt tcttttgccg aatttttaag acgctttaga gaagctgtag atataaaaca
     7381 tatctttata ggacttgcaa aagcacctat ttttggattt ttgataggac ttattgcttg
     7441 ttttcgtggt tttgaggtaa aaaacactac acaaagtata ggaatttata caacaaaaag
     7501 cgttgtaaat gctatttttt gggtaatagc ctttgatgct ttattctccg ttattttaac
     7561 ttctacagga atttaaatgg ttattaaagc gcaaaatatc attacaaaat ttggagaaaa
     7621 aatcgtccat gatggcgtaa gttttgaaat caaaaaaaac gaaatttttg gtattttagg
     7681 aggtagtgga agtggaaaat ctgtcctttt aaaacaaatg cttatgcttg aacattttga
     7741 tggtggagaa tatgaaattt taggctataa gcttaaaaat atcaacgagg aagatgcgct
     7801 tgctttgcgt aaaaaatggg gtgtggtttt tcagtttgct gcacttttta gcttttttaa
     7861 tatttatgaa aatatcgcta ttcctttaaa agaatacact catttagatg aaaatagcat
     7921 acaagaactg gttttaatga aactaaaaat ggtaggttta aacgaaagtg ttttaaaaca
     7981 atttcccagt gaacttagtg gcggcatgca aaaaagagtg gcaattgcta gagctttagc
     8041 acttgatagt aaattgcttt ttttagatga acctacttca ggacttgacc ctcatagtag
     8101 ccgtgaattt gacgatttgg ttttagagtt aaaaaaaagt tttgatttaa atatcatttt
     8161 ggttacacat gataaagaaa gtatgaaaaa tttactcgat cgttttatca ttttagaaaa
     8221 taaaaaagtt ggattttgcg gtacttatga agaattacgc ctgcaaaatg aacgactttt
     8281 taaaagattt atggagtaaa agtggaaaat agagcaaatt atttttttgt aggacttttt
     8341 gtttttggag tattttttgc aagccttggt ttcatacttt ggcttggtgg atactctaaa
     8401 gaagaaagtt ttaagtatta tgaaattcac acacaagaat ccgttgcagg acttggcata
     8461 aaagcacccg taaggctttt gggcgtggaa gtaggtagcg tagaagaaat cagcatttac
     8521 aatcaagatg aactcggcgt taacatacgc atcaaggtca aaaacaatac ccctataaaa
     8581 gaagatactt ttgctacttt gcaacttcaa ggtatcacag gacttaaatt tgtccaactt
     8641 caaggcggaa gtaaaaatag taaagatcta gtatctatac agggaaaact tccagtcatt
     8701 ccttttaaag aaagtttttt agcaaccata gatagacaaa gtgaacatat tttttcttta
     8761 gttaaaacgg ccgatgataa atcaaaagag cttttaagcg aaaaaaatct taaaaatcta
     8821 gaaatccttt tgcaaaatct agcagaatta agcgcaaatt taaacgctaa ttctaaaaat
     8881 ttaagcctta atctttcaaa cacaagttta aaaataggaa aaatggctga taatataagc
     8941 cttagtgcgc aaaatttcaa ctccagtctt aaaaacataa aagaaagtac gatgatttta
     9001 aaaaatttca taaaaaaagc tgatgaaaaa ttaaacactt atgatgatat taaagcatct
     9061 ttgatgcaaa atttagaact ttttaaacgg gttttaattg aaagcaatat tctaatagaa
     9121 aatttacaaa acagccctgc tgatttgatt tttaaagaaa ctaaacctaa acttggacca
     9181 ggagaaaaat aatgctaaag caattattct gtattttgac ttttattttt atgttatgcg
     9241 gatgctcttt aagacacgaa accatcaata aaaatgaaaa tatcatatta aaagacgaag
     9301 gaatagactc aaatattttt tttaaaaaaa ccggtaaaat tcttaaaatt cgcaatacaa
     9361 atgcaccttt gtatttaaac tcgcgagcta ttgtttatat agataatggt tttagcaaca
     9421 aatacgcaca ttatttctgg ggagatttgc caagcaatct ttattctttt ttaattttat
     9481 caaaatttga acaaagcaat atttttacaa ccttactttc ttcaacaagc tctttaagtg
     9541 cggattatgc tcttgaaagc aggattaact cttttgagca aattcttaat aacaatgaaa
     9601 actacgctca aatttctata agcgtaaatt tcataaatct tgaaaacaat caaataatag
     9661 ctcataaaat tttcaatacc aaagaaaaaa tagaaaaaaa agatatccgc tctacctata
     9721 atgcttttca aaaagccttg aataaaattg gcaatgagat tgttttttgg gtaaattcta
     9781 acttatccta atttaggaac actttttgct ttttaaatat ttagcaatat ttttgaaagg
     9841 taaacaatga aaagtgattt agatatattt aaaaaacact taggtgaaat tcagggcgtg
     9901 aatgaattta aagcaaatca aatttgctct caaatcaatg atgcaaatga ttttatagga
     9961 gcacttcaag tgcttgatat gtctttaaaa aaaatagaaa aaagcattct agaaagaata
    10021 gatgaaaatt cagatgatat gcaaaaaaga actcttgatg ccacagcgtc acaacttata
    10081 caaaactgct ctttcatggg aacagctctt tttggaaata ttttcaatgt ttatgttggt
    10141 aaaaaacttt ttgaatttga aattgctaat ccacttttaa ttcttcaaac aagcaattat
    10201 gaaggtgtat tggcctatat acaagataaa agagatgaaa taaaaatcat tctatcagaa
    10261 ttagcaaccg caattaccat gggcgaaact atggataatg ctggaattta taactctaca
    10321 atggatttta aaaatttatt taaataagaa tagtaatcgt ttgttctctt taagcaaata
    10381 taatatattt tagcttaaag agattttcca aactctaaaa gagagttagg ctacgaataa
    10441 aaagggggag ggaaatagcc taacccaaac gagatcttaa aagatc
//
LOCUS       DAPIWB010000056        10361 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.057, whole genome shotgun sequence.
ACCESSION   DAPIWB010000056 DAPIWB010000000
VERSION     DAPIWB010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10361)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10361)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10361
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.057"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(158..715)
                     /locus_tag="RJ266_001319"
     CDS             complement(158..715)
                     /locus_tag="RJ266_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HDV7355054.1"
                     /translation="MKYQLRFGGEGGQGVITAGEILAEAAIKEGRQAFKASTYTSQVR
                     GGPTKVDIIIDDKEILFPYAVEGEVDFMLSTADKGYKGFRGGVKEGGIIVVEPNLVHP
                     ESEDYKKWQIFEIPIITIAKDEVGNVATQSVVALAIAAYMSKCIDLDVLKDTMLHMVP
                     AKTRDANAKAFDLGVKYATQAKPHS"
     gene            complement(712..1557)
                     /locus_tag="RJ266_001320"
     CDS             complement(712..1557)
                     /locus_tag="RJ266_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HDV7355055.1"
                     /translation="MAFNYDEYLRVDKMPTQWCWGCGDGVVLKCIIRAIEKLGWNMDD
                     VCLVSGIGCSGRMSSYVNCNTVHTTHGRAIAYATGIKLANPSKHVIVVSGDGDTLAIG
                     GNHTIHGCRRNIDLTHIVINNFIYGLTNSQTSPTTPKGFYTVTAQFGNIDPNFDACEL
                     TKAAGASFVARGNVIEANKLENLIYKALAHKGYSFVDVFSNCHINLGRKNKMGEAVAM
                     LDWIKNRVVDKAKFESMDFEERKDKFPTGILHEDNSQPEYCHAYEEVRRAAKEKRMVD
                     LGALK"
     gene            complement(1558..2682)
                     /locus_tag="RJ266_001321"
     CDS             complement(1558..2682)
                     /locus_tag="RJ266_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate synthase subunit alpha"
                     /protein_id="HDV7355056.1"
                     /translation="MREVIATGNVLIAKAAIDCGCKFFGGYPITPSSEIAHELSHMLP
                     ANDGTFIQMEDEISGISVAIGAAMSGVKSMTASSGPGISLKAEQIGLAFIAEIPLVIV
                     NVMRGGPSTGLPTRVAQGDLFQAKAPTHGDFASIAIAPASLEEAYTETIRAFNLAEKY
                     MTPVFLLMDETVGHMNGKAVLPDLKDIKVYNRKKFEGDKKDYKPYAAGENEPATLNPF
                     FTGYRYHVTGLHHGDIGFPTEDGVIVKKNMERLIGKIKNNQEDICTYEEYMLDDAEFL
                     IITYGSVSRSAKEAIQRLREQGIKVGLFRPITLYPVAEKKIAEVVSKFKKVMVSELNM
                     GQYLEEIERVTSRRDFISLHRANGRPITPSEIIAKVKENI"
     gene            complement(2691..3002)
                     /locus_tag="RJ266_001322"
     CDS             complement(2691..3002)
                     /locus_tag="RJ266_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HDV7355057.1"
                     /translation="MSMTAPKDTPVWVDEHRCKACNICVSYCPAGVLAMRDDVHAVLG
                     QMIEVVHPESCIGCTECETHCPDFAIMVAKRDEFKFAKLTAEAKDRAVAVKNNKYKKL
                     A"
     gene            complement(3017..3886)
                     /gene="sucD"
                     /locus_tag="RJ266_001323"
     CDS             complement(3017..3886)
                     /gene="sucD"
                     /locus_tag="RJ266_001323"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HDV7355058.1"
                     /translation="MSILVNKNTKVIVQGFTGKEATFHAEQCMAYGTNIVGGVTPHKG
                     GQTHLGKPVFDTVADAVKATKTDVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPV
                     KDMMFAKQYANKKGMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYE
                     AANQVVQGGYGISTAVGIGGDPIIGLAYKELLSEFQKDDETKVIVMIGEIGGSLEVEA
                     AKFIKENISKPVVAFIAGATAPKGKRMGHAGAIVGSADESAAAKKEALKSYGIHVVDS
                     PALIGEEIQKILG"
     gene            complement(3896..5059)
                     /gene="sucC"
                     /locus_tag="RJ266_001324"
     CDS             complement(3896..5059)
                     /gene="sucC"
                     /locus_tag="RJ266_001324"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HDV7355059.1"
                     /translation="MNIHEYQAKAIFVDNGIPTLKGKVAFSVDEAVANAKELGGSVWA
                     VKAQIHAGGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGA
                     NIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHG
                     LEVARVLGLDKDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSF
                     DDSALYRHPEIAELRDTTEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDII
                     NYSGAKPANFLDVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILE
                     ATKNVEVNIPIVVRLDGTNAAEAKTILDNSNLKNIKAATNLKNGAELVKSLVG"
     gene            complement(5060..5962)
                     /locus_tag="RJ266_001325"
     CDS             complement(5060..5962)
                     /locus_tag="RJ266_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDV7355060.1"
                     /translation="MKITVIGAGNVGSSVAYALILREIANEIVLVDINEDLLYAKELE
                     LTQSIAALNLNIDLLCTKDYTHTKNSDIVLFSAGFARKDGQSREELLQLNISIMLDCA
                     KKIKDFTEDPLFIILTNPVDFLLNTLYESGIFSSKKIIAMAGVLDNARFKYELAKKLN
                     VKMSSVDTRLIGFHNDDMVLVKSYASVKNKNISEFLNEEEFEDLENEVKTGGAKVIKH
                     LKTSAYLAPASACIRMLESIRSGEFLPMSVILHGEFGVQNKALGVMARLGLEGVIEIM
                     KMDLSLQEKDKLEKSLIKYQYKGE"
     gene            complement(5959..8163)
                     /locus_tag="RJ266_001326"
     CDS             complement(5959..8163)
                     /locus_tag="RJ266_001326"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HDV7355061.1"
                     /translation="MQITYTLTDESPALATYSFLPIVKAFLSRAHIGVKTSDISLSGR
                     ILATFSEYLKEEQRCEDALELLGELVKRSDANLIKTPNISASIPQLKAAIKELQDKGY
                     MLPNYPDEPKNDEELQIKTKYQKVLGSAVNPVLRQGNSDRRSTKAVKDYAKNNPYRVV
                     EFNPNSKTRVSYMKEGDFFSNEKAVLIDQDCVANIEFTSIDGKNEILKEGLELEKNEI
                     LDATFMDVQKLQEFYAKEIKASKDDDVLFSLHLKATMMKVSDPILFGYAVKVFFKELF
                     IEFQDEFEKLGINPNNGLSELLSKIENSSKKDEILKKYNEILAKSADISMVNSDKGIT
                     NLHVPSDVIVDASMPAMLKNGARLWDKEGKEKDTNAVIPDQTYATIYEAVIEDLHKNG
                     TLNPSKLGSVSNVGLMAKKAQEYGSHDKTFVAKEEGTFKIVSNGKVLLEHKVRKGDIY
                     RANQAKFDAVLNWIDLGIERSELSGAEAIFWLDSKRASNKIMITLVQNRLKEKGKNIA
                     ILTPKEACLRSLELIREGKDVISITGNVLRDYLTDLFPILELGTSAKMLSVVPMLKGG
                     AMFETGAGGSAPKQVEQLVEENHLRWDSLGEFLALQASLEFYANKCSNHKAKVLAECL
                     DEAIGEWLENNKAPSRKVKEDDNRTSHFYLAMYFANHLARQASDMELQSFFKDIALEL
                     SSNEEKIRAEFNNAQGVKVDLGGYYKFDDEKANKIMRPSATFNAILEKIGQR"
     gene            complement(8280..>10361)
                     /locus_tag="RJ266_001327"
     CDS             complement(8280..>10361)
                     /locus_tag="RJ266_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA-like C-terminal domain-containing protein"
                     /protein_id="HDV7355062.1"
                     /translation="KSEFYYFQGRASGELLDFNASISYKDKNLAYKIEDLNIRNITEI
                     FKRVNKRIELPQSLNLWVAYRAKGEFYHLDYLQGFIDFTKDNYYLDNISASGYVNNVK
                     VRLDDKMNAIEIPKLDLNLNKQKLDFVFNKAFYNGADLSSSKVYLYDLFDEKKVGIYL
                     RIKSDNLKFDEKLAKALEDYHFSLPFYQKSGKIKSDLELKIDFHDKGEISYSGILALE
                     NASISLADFNITKAFVKLNQNDLNIENASVKNGFLEADFNAKFDLQKQQGNFNTQISR
                     LYFDNAELLDLKNQNVEVKLDYSQNVNISIPQWNLILNFKDGLEANLNNPKILFSFSP
                     LLKKLGFINAKNVYYKTLNFEDFNASVNDAYFKNNLLINGQTPYENDSFDIVKNKGIM
                     EIHTQSDTASAKISSDNKEIHLKNLSYIYRKGSNSSNSTFDISTNTQNISFGGANVAL
                     ILPDSNKTLAFDRVEADLKGNALDLKGSRGNAKFDLYYSSNDLNLNVSNIDDNYLNEF
                     LQKQAVQDGVFNLSIKGSGLEYFDGQIDFKNTYVKDLRGINQLISFIDTVPSLLMFKS
                     PTFNQKGLSLHDGKIIFNRKKDLLSVSAINLNGDSVDIYGLGSANLRLNTVDFSLELK
                     TLKSVSEAISKVPILNYVILGKNQEISTNLKIDGSIDDPKFHTEILTDTLKTPFNLIK
                     NIIQLPANLLN"
BASE COUNT         3295 a         2075 c         1281 g         3710 t
ORIGIN      
        1 tttcatcaaa aaaatccatt aattttcctt gaaaatataa gtttttgatt ataaaatttt
       61 aatcgttaaa agtagctaaa ttaaaataat taaaatttaa attttatttg caatatgtaa
      121 aattttagaa gttaaattcc gcatgatgcg gaatttatta tgaatgtggt tttgcttgag
      181 tggcgtattt tacacccaga tcaaaagctt tagcatttgc atcacgagtt tttgcaggaa
      241 ccatatgaag catagtgtct tttaaaacat ctaaatctat acatttactc atataagcag
      301 caattgcaag tgctacaact gattgagtag ccacatttcc tacctcatct ttagctatgg
      361 taataatagg aatttcaaaa atttgccatt ttttataatc ttcactttca ggatgtacta
      421 aatttggctc tacaactatg atacctcctt cttttacacc cccacgaaaa cctttataac
      481 ccttatctgc agtcgaaagc ataaaatcta cttccccttc tacagcataa ggaaataaaa
      541 tttctttatc atcgatgata atatccacct tagtagggcc accacgcact tgtgaagtgt
      601 aagtagaagc cttaaaagct tgacgacctt ctttaatggc tgcttctgct aaaatttctc
      661 ctgcggtgat aacaccttgt ccgccttcac cgccaaatct taattgatat ttcattttaa
      721 agctcctaaa tccaccattc ttttttcttt ggctgcacga cgtacttctt cataagcgtg
      781 gcagtattct ggctgagaat tatcttcatg taaaattcct gttggaaatt tatcttttct
      841 ttcttcaaaa tccatgcttt caaatttagc tttatccaca acgcgatttt taatccaatc
      901 aagcatagct acagcttcac ccattttgtt ttttctgcct agattgatat gacaatttga
      961 aaaaacatct acaaaactat aacccttatg cgctaaagcc ttataaatta aattttcaag
     1021 cttattagct tcgatcacat taccccttgc cacaaaagaa gctcctgcag ctttagttaa
     1081 ttcacacgca tcaaaattag ggtcaatatt tccaaattga gctgttactg tataaaaacc
     1141 ttttggagtg gttgggcttg tttgggaatt cgtaagtcca tagataaagt tattgatcac
     1201 aatgtgggtt aaatcaatat ttctgcgaca accatgtata gtatgatttc caccaattgc
     1261 caaagtatcc ccatctccgc ttactacaat aacatgttta ctaggattgg ctagtttaat
     1321 gcctgttgca taagctattg ctctaccatg agttgtatga actgtattac aatttacata
     1381 agaactcatt ctgccactac aacctatacc cgaaacaaga caaacatcat ccatattcca
     1441 accaagtttt tctatcgcgc ggataataca ttttaaaaca acaccatcgc cacatcccca
     1501 acaccattga gtaggcattt tatctactct tagatattca tcataattaa aagccattta
     1561 tatattctcc tttaccttag caataatttc acttggagtg ataggacgac catttgcacg
     1621 gtgcaaacta ataaaatcgc gacgcgaagt tactctttca atctcttcaa gatattgtcc
     1681 catattaagc tcgcttacca ttactttttt aaatttgctt acaacttcag cgattttttt
     1741 ctcagccact ggataaagag taatcggacg gaaaagcccc actttaatcc cttgctctct
     1801 taatctttgt atagcttctt ttgctgaacg actcacgctt ccataagtaa tgattaaaaa
     1861 ttcagcatca tcaagcatat actcttcata agtacaaata tcttcttgat tgttttttat
     1921 tttacctatg agtctttcca tatttttttt cactataact ccatcttcag ttggaaaacc
     1981 tatatctcca tgatgaagtc ctgtaacatg ataacgataa cctgtaaaga aaggatttaa
     2041 agttgcaggc tcattttctc ctgctgcata aggtttataa tcctttttat cgccttcaaa
     2101 ttttttacgg ttatatactt taatatcttt taaatcaggt aaaaccgctt taccattcat
     2161 gtgccctaca gtttcatcca taagtaaaaa tactggagtc atatattttt cagctaaatt
     2221 aaacgctcta atggtttctg tataagcttc ttcaagactt gcaggagcaa tagcaatact
     2281 tgcaaaatcc ccatgagttg gtgctttagc ttgaaacaaa tctccttgtg ctacacgagt
     2341 tggaagacct gttgaaggac cacctctcat aacatttaca atcacaagtg gaatttcagc
     2401 aataaatgca agtcctattt gctctgcttt taaagaaatt ccaggaccgc tacttgcagt
     2461 catggatttt accccactca ttgccgcacc aatagccacg ctaatacctg aaatttcatc
     2521 ttccatttgt ataaaagttc catcatttgc aggaagcata tggcttaatt catgagctat
     2581 ctcactacta ggagtaatag gataacctcc aaaaaattta catccacaat caatcgcagc
     2641 tttggcgatt aaaacattac ctgttgctat aacttctctc attatttttc ctatgctaat
     2701 tttttgtatt tgttattttt tacggctaca gctctatctt tagcctcagc agtaagtttg
     2761 gcaaatttaa attcatctct ttttgccacc ataatagcaa aatcagggca atgtgtctca
     2821 cactcggtac agcctataca ggattcaggg tgtaccacct ctatcatttg tcctaaaacc
     2881 gcatgcacat catcgcgcat agctaaaacc ccagcggggc aatagctaac acaaatatta
     2941 catgctttac atctatgctc atctacccaa acaggggtat cttttggagc tgtcatactc
     3001 atgttttttt cctttattaa cctaatattt tttgaatttc ttcaccaatt aaagccggag
     3061 aatccaccac atgaattcca tagcttttta aagcttcttt tttagctgca gcactttcat
     3121 cagcacttcc tactatggca cctgcatgcc ccattctttt gcctttagga gcagttgcac
     3181 ctgcaatgaa tgctaccaca ggtttgctaa tattttcttt aataaattta gccgcttcca
     3241 cttccaaact accaccaatt tcacctatca ttacaataac tttagtttca tcatcttttt
     3301 gaaattcact taaaagttct ttataagcaa gacctatgat aggatcacca ccaattccta
     3361 ctgcagtaga aattccataa ccaccttgaa ctacctgatt agcagcttca taagttaaag
     3421 ttccactttt tgaaataagc cccacgcaac cttttttaaa aataaaacct ggcataatac
     3481 ctaacttaca ttcttcagaa gtaataatac ctggacaatt tggtccaatg attttcatac
     3541 cctttttatt agcatattgc ttagcaaaca tcatatcctt tacaggcgta tgctcggtga
     3601 ttacaactgc aagcttaata cccgcatcag ctgcttcaat cacgctatca cccacagcaa
     3661 aagcagggac aaagatcaag ctcacatcag tctttgttgc tttaaccgca tctgcaacgg
     3721 tatcaaaaac tggtttacct aaatgagttt gtccgccttt atgaggggtg acacctccaa
     3781 ctatatttgt accataagcc atgcattgct cagcgtgaaa agttgcttct ttacctgtaa
     3841 aaccttgaac tattactttt gtatttttat taaccaatat actcattttc catccttatc
     3901 ctactaaact ttttacaagc tctgcaccgt ttttaagatt ggttgctgct ttgatatttt
     3961 taagatttga attatctaaa attgtctttg cttctgctgc gttagtgcca tcaagacgca
     4021 ctacaattgg aatatttacc tcaacattct tagtagcttc taaaattcca tttgctatcc
     4081 tatcacaacg aacaatacca ccaaagatat tgataaatat aacttttaca tttttatctc
     4141 ttaaaataat ttcaaaagcc tttgcaacag tttctggaga agctccccca cctacatcta
     4201 agaaatttgc aggttttgca ccactataat taataatatc catagttgcc attgctagac
     4261 ccgcaccatt taccatacaa gctacatctc catctaattt cacatagctt aagccaaatt
     4321 cagccgcttc tctttcagca ggattttctt cagtagtatc tctaagttca gcaatttcag
     4381 gatgacgata aagcgcacta tcatcaaaac tgcattttgc atcaagggca taaaaatccc
     4441 cttctgcagt tttaattaaa ggattaattt caagcatatt catatcttta tccatgtaaa
     4501 gcttataaag tttagctatc atagaaatga gttttttgcc ttcatcttta tcaagtccca
     4561 aaactctcgc tacttcaagt ccatgaaaca ttttaaatcc aatttgtgga tcaataccta
     4621 cttttgcaat tttttcagga ctttctttgg ctactttttc tatatccatc cctccttcac
     4681 ttgaagcgat aatggtaatt tgctctgcca ttctattaaa caaaatagcc aaataatact
     4741 cttttactat attagcacca ctttctatat aaagtttttg cacaagtttg ccttcaggtc
     4801 ctgtttgatg agttactaaa ttcattccta aaattttact tgcataatct tttacctcat
     4861 ctaaattctt agcgatttta acaccaccac caagaccacg gcctcctgca tgaatttgag
     4921 ctttaactgc ccaaacacta ccgcctaatt ctttagcatt agccacagct tcatctacgc
     4981 taaatgcaac ttttcccttt aaggtaggga tgccattgtc tacaaaaatt gcttttgctt
     5041 gatactcatg tatgttcatt tattctcctt tatattgata tttgattaaa gatttttcta
     5101 atttgtcttt ttcttgcaaa ctaagatcca ttttcatgat ttcaatcaca ccttcaagtc
     5161 ctaatcttgc cataactccc aaggctttgt tttgcactcc aaattctcca tgtaaaatca
     5221 cactcatagg taaaaactcg ccacttctta tagactcaag cattcttata caagcactag
     5281 caggggctaa ataagctgaa gttttaagat gtttgattac tttagctcca cctgttttaa
     5341 cttcattttc taaatcctca aattcttctt catttaaaaa ttcgcttata tttttatttt
     5401 taacacttgc gtaagatttt accaaaacca tatcatcatt atgaaaacca ataagtcttg
     5461 tatccacgct tgacattttg acattaagtt ttttggcaag ttcatactta aatcttgcat
     5521 tgtctaaaac acccgccatg gctataattt tctttgatga aaaaatcccg ctttcataaa
     5581 gagtattaag tagaaaatcc acaggattag ttaaaataat aaaaagcgga tcttctgtaa
     5641 aatctttaat ttttttagca caatcaagca taatgcttat atttaactga agcaattctt
     5701 ctctactttg cccatctttt ctagcaaaac ctgcactaaa aagcactata tctgaatttt
     5761 tggtatgagt ataatcttta gtgcaaagta aatctatatt taaatttaaa gcagctatgc
     5821 tttgagtaag ctctagttct tttgcgtaaa gcaaatcctc attaatatct actaaaacaa
     5881 tttcatttgc tatttctctt aaaatcaaag cataagctac gcttgaacct acattgccag
     5941 cccctataac agtgattttc atctttgtcc tattttttct aaaatagcgt taaaagttgc
     6001 acttggacgc atgattttat ttgctttttc atcatcaaat ttataatacc cacccaaatc
     6061 cactttcaca ccttgtgcat tgttaaattc ggctctgatt ttttcttcat tagaagaaag
     6121 ctctagggca atatctttaa aaaagctttg aagctccata tcacttgcct gtcttgctaa
     6181 atgatttgca aaatacattg ctaaataaaa atgacttgtt ctattatcat cttctttgac
     6241 ttttcttgat ggagctttat tattttcaag ccattcgcct atagcctcat caagacattc
     6301 tgctaaaacc ttagctttat gattgctaca cttatttgca taaaattcca aacttgcttg
     6361 caaagccaaa aattcaccca aactatccca acgcagatga ttttcttcga ctaattgttc
     6421 tacttgttta ggtgctgaac cccctgctcc tgtttcaaac atagctccac cctttaacat
     6481 aggcacaaca gaaagcattt ttgcacttgt tccaagctct aaaataggaa aaagatcagt
     6541 taaataatcc cttaaaacat tacccgtgat agaaataaca tctttacctt ctcggattaa
     6601 ctctaaactt cttaaacaag cttcttttgg agttaaaatg gctatatttt tacccttttc
     6661 ttttaaacga ttttgtacca aagttatcat gattttatta ctagctcttt tgctatctaa
     6721 ccaaaaaata gcttcggctc cactaagttc tgatctttct atacctaaat caatccaatt
     6781 taacaccgca tcaaatttag cctgattagc tctataaata tcaccttttc taaccttatg
     6841 ttctaataaa actttaccgt tagaaactat tttaaaagtt ccttcttctt tagccacaaa
     6901 ggttttatcg tgcgatccat attcttgagc ctttttagcc attaaaccta cattagatac
     6961 actgccaagt tttgaaggat ttaaagtacc atttttatgc aaatcttcaa taaccgcctc
     7021 ataaatagtt gcgtaagttt gatcaggaat tacggcattt gtgtcctttt ccttaccttc
     7081 cttatcccac aatcttgcgc catttttaag cattgcaggc atagaagcat caacaataac
     7141 atcacttgga acatgaagat ttgtaatgcc tttatcggaa tttaccatag aaatatctgc
     7201 agatttagct aaaatttcat tgtatttttt taaaatttca tcttttttgc ttgaattttc
     7261 gatcttactt aaaagctcac ttaaaccatt atttggatta atgcctaatt tttcaaattc
     7321 atcttgaaat tcaataaata attctttaaa aaatactttt accgcataac caaaaagtat
     7381 aggatcactt actttcatca ttgtagcttt taaatgcaaa gaaaaaagca catcatcatc
     7441 tttgcttgct ttaatttctt ttgcataaaa ttcctgaagt ttttgcacat ccataaaagt
     7501 agcgtctaaa atttcatttt tttcaagttc taagccctct tttaaaattt catttttacc
     7561 atcaatgctt gtaaattcta tattagccac acaatcttga tcgattaaaa ccgctttttc
     7621 attagagaaa aaatcccctt ctttcatgta agaaacacga gtttttgagt ttgggttaaa
     7681 ctcaaccaca cgataaggat tgttttttgc ataatctttt accgcttttg ttgaacgacg
     7741 atctgaattt ccttgtctta atacaggatt aaccgctgaa cctaaaactt tttgatattt
     7801 tgttttaatt tgcaattctt catcattttt tggctcatct gggtaatttg gtaacatata
     7861 acccttatct tgcaattctt taatcgccgc cttaagctga ggaatagaag ctgaaatatt
     7921 tggggtttta ataagatttg catccgatct tttgacaagc tcgcctaaaa gctctaaagc
     7981 atcttcacat ctttgctcct cttttaaata ctcactaaaa gtagctaaaa tccttccaga
     8041 caaagaaata tccgaggttt ttactcctat atgtgcccta cttaaaaaag ctttcactat
     8101 aggcaaaaac gaataagtcg caagagctgg agactcatct gttaaggtat aagtaatttg
     8161 catttttagt cctttaaaat acttattttt attttcattt ttaagtatat tacaaataaa
     8221 aaaaaatgca agagtaagtt taaagtttgt tttagttttc aaacaaactt taaatatttt
     8281 taattaagta aattagcagg aagttgtatg atatttttaa taagattaaa aggggttttt
     8341 agagtatctg ttaaaatttc ggtatgaaat ttagggtcat ctatacttcc atctattttt
     8401 aagtttgtgc taatttcttg atttttacct aaaattacat aatttaaaat tggaaccttg
     8461 gatatagctt ctgaaactga ttttaaagtt ttaagctcta aactaaaatc cactgtattt
     8521 aatcttaaat ttgctgatcc taaaccatat atatctacac tatcgccgtt taaattaata
     8581 gctgaaacac ttaaaagatc tttttttcta ttaaaaataa tctttccatc atgtaggctt
     8641 aaaccttttt gattaaaagt tggagattta aacatcaata aacttggtac agtatcgata
     8701 aaggaaataa gctgatttat acctcttaaa tccttcacat aagtattttt aaaatcgatc
     8761 tgtccatcaa aatactccaa tccacttcct tttatactta agttaaacac tccatcttga
     8821 acagcttgtt tttgtaaaaa ctcatttaaa taattatcat caatattgct aacgtttaaa
     8881 tttaaatcat tagaagaata ataaagatca aattttgcat ttcctctaga acctttaaga
     8941 tccaaagcat tgccttttaa atcagcctct accctatcaa aagccaaagt tttattagaa
     9001 tctggcaaaa ttaaagctac atttgctcca ccaaaactaa tattttgggt attagtagaa
     9061 atatcaaatg ttgaatttga agagttggaa ccttttctat aaatataact taaatttttt
     9121 aaatgaattt ctttattatc agaacttatt ttagcacttg ctgtatcact ttgagtatga
     9181 atttccataa tgcccttatt ttttacaata tcaaagctat cattttcata aggagtttga
     9241 ccgttgataa gtaaattatt tttaaaataa gcatcattaa cacttgcatt aaaatcttca
     9301 aaatttaaag ttttataata aacattttta gcattgataa acccaagctt tttaagtaat
     9361 ggagaaaatg aaaataaaat cttaggatta ttaagattag cctcaagtcc atctttaaaa
     9421 tttaaaatca aattccactg aggaatgcta atgttaacat tttgcgaata atctaatttt
     9481 acttctacat tttgattttt taaatctaaa agctctgcat tgtcaaaata aagccttgaa
     9541 atctgagtat tgaaatttcc ttgctgtttt tgtaagtcaa atttagcatt aaaatcagct
     9601 tctaaaaagc catttttaac actggcattt tctatattta aatcattttg atttaatttt
     9661 acaaatgctt ttgtaatatt aaaatcagcc aaagaaatac tagcattctc taaagctaaa
     9721 ataccactat aagaaatttc acccttatca tgaaaatcaa ttttaagctc caaatcactt
     9781 ttaatttttc cgcttttttg ataaaaaggt agtgaaaaat gataatcctc taaagcttta
     9841 gcaagttttt cgtcaaattt tagattatca gacttaatgc gcaaataaat cccaactttt
     9901 ttttcatcaa acaaatcata tagataaacc ttactagaac ttaaatcagc accattatag
     9961 aaagctttat taaagacaaa atcgagcttt tgtttgttta aatttaaatc gagttttgga
    10021 atttcaatag cattcatttt atcatccaag cgaactttga cattattaac ataacctgat
    10081 gcactaatat tgtctaaata ataattatct ttagtaaaat ctataaagcc ctgcaaataa
    10141 tctaaatgat aaaattctcc cttagcccta tatgctaccc aaagatttaa actctgcgga
    10201 agttctattc ttttattaac tcttttaaaa atttccgtaa tatttctaat gtttaaatct
    10261 tctattttat aagctaaatt tttatctttg taagagatgc ttgcgttaaa gtcaagcaat
    10321 tctccacttg ctctaccttg aaaataataa aactcgctct t
//
LOCUS       DAPIWB010000057         9577 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.058, whole genome shotgun sequence.
ACCESSION   DAPIWB010000057 DAPIWB010000000
VERSION     DAPIWB010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9577)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9577)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9577
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.058"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..376)
                     /locus_tag="RJ266_001328"
     CDS             complement(<1..376)
                     /locus_tag="RJ266_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EI24 domain-containing protein"
                     /protein_id="HDV7355063.1"
                     /translation="MDILKLAIKDFLSLKFLKFALIPLIFSLILMLFLGVLGFSALLD
                     YFNSLFSVGEDSFWAWFYALHFVQILITIISFLFSGFIVVFASVFLALFITSFLTPFI
                     AKEINQKYYHYDNTNEVSTLKII"
     gene            complement(378..1067)
                     /gene="dut"
                     /locus_tag="RJ266_001329"
     CDS             complement(378..1067)
                     /gene="dut"
                     /locus_tag="RJ266_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTPase"
                     /protein_id="HDV7355064.1"
                     /translation="MTNIEILENMLKLQQKLNDETNGLNWENGYTKEGKLISWRRCIY
                     MECAELIDSFAWKHWKNISNPTNWENVRIEIVDIWHFILSLLLEEYRDKNNKDFKAIA
                     TEVNAVSVFQDFCKEEEYPNEGDIYGILNDIELIIHKCSGFGFNLGELLSTYFTLAIK
                     CGLNLEILYKTYIGKNVLNIFRQNNGYKDGSYKKTWNGKEDNEVLAQILEQELDFDTI
                     YKKLEECYKKA"
     gene            complement(1103..1666)
                     /gene="ciaI"
                     /locus_tag="RJ266_001330"
     CDS             complement(1103..1666)
                     /gene="ciaI"
                     /locus_tag="RJ266_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular survival protein CiaI"
                     /protein_id="HDV7355065.1"
                     /translation="MQIDASKNQSFSMDYTTKSGKHLALSMYDNQSISYANNEEGKTL
                     NLKRQYGFSFTFEGSKLTQNDLDEIKNAMKEVEPMIKDFLANSKVGELKPKEIIESAM
                     QMANVLPTPNDKNHQNAIMNNFTNKLSDLLKQNQTNDKDINTSMLEDSKKLLDEVLEQ
                     MKKQLEKQQEKAKENQDKTDDSLNLYA"
     gene            1741..2148
                     /locus_tag="RJ266_001331"
     CDS             1741..2148
                     /locus_tag="RJ266_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355066.1"
                     /translation="MDERILEFIKNEQLLSWAMIDEKGVYTASAFYAFDEKNLAFIIA
                     SHEDTKHIRLASENSSIALNIAKESKIAFLKGVQAKAEFKMASKEQKKIYFSKFPFAI
                     LDKSAKIYALELFWLKFTNNALGLSKKLEFCKK"
     gene            2220..3002
                     /locus_tag="RJ266_001332"
     CDS             2220..3002
                     /locus_tag="RJ266_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7355067.1"
                     /translation="MLNVIHALFFRELKTRFGANRHLGYLWVVGEPMSITLAITVIVT
                     IIREYHHQVMPEGISIFMFLISGIMPYFMFRSIVTQLMNGTQANLALFAYKPVKPIHV
                     FIARTLLEFCIYFVIFITVLFFAGWFFRFDVFPVHLLGVLFCIFLLMCSAFALGICFA
                     IIWHFVEPLRTLLAYFSIVFYWSSGIIFPTWLMPRPLLDIFYYNPLLHIMELLRFNFF
                     ENYPLQDEYSYFYAIFWILLVLFIGLFIYYYNRQALTAAKKE"
     gene            2999..3661
                     /locus_tag="RJ266_001333"
     CDS             2999..3661
                     /locus_tag="RJ266_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7355068.1"
                     /translation="MIKLINLTKSYPLFSGGRHYVFKNFTFEFPENCSIGLMGGNGAG
                     KSTLMRLLSGAELPDSGKIITNKKLSWPLGLNGAFQGSLTARDNAKFVARVYGYKGQE
                     LQEKVKFVEDFAELGKFFDEPMKTYSSGMSARIAFGLSMAFDFDYYLIDEAGAVGDPA
                     FREKSVKLYRERLSKSKVIMVSHDVAEIKEWCDKIIYMKNGQIAVYDDVDEGIAVYQG
                     KA"
     gene            3661..4779
                     /locus_tag="RJ266_001334"
     CDS             3661..4779
                     /locus_tag="RJ266_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HDV7355069.1"
                     /translation="MEENKTLLEKIKDLSIFDSFKIVWFIMIFVVIYYTLIAAPRYVS
                     TMILDVRSTSGESAQTSGILSLLSSTSTANEDLNYLKGYIESSDMLRILDEKIKLKDL
                     YQEQHIDLPFKIWDSSSIESYLKYYQARVKVHTDETTKLLQVEVEGFTPKSAHLIAQT
                     IMQESEKFINEISHKAAREQMAFAENEVQKYKERYQKAQNGLIAFQNKYGVFDPLKQA
                     EAKASLVAQIETNLAQKEAKLLTLQSYMNDAAPEVVALKAEIEAIKKQLLREKSKISA
                     NNSSQKLNDLAAKFQDLTIEATFAQKAYEAALKAYESARIEALRKIKQLVIIQSPDIP
                     ESAKYPERIYDILTAFIVLSLIFGIVKFIKMIIEEHKY"
     gene            4781..6439
                     /locus_tag="RJ266_001335"
     CDS             4781..6439
                     /locus_tag="RJ266_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLBB domain-containing protein"
                     /protein_id="HDV7355070.1"
                     /translation="MKKILILLFSCILCFGAVDVSQIISAEDQGSTTTSIDQNLSSNY
                     DIANKENNLTKIHQILVFGAHLFNGNFKNYNQRVYNPDYKIAVGDQISLKIWGAVEFS
                     QVLVVDSQGNIFIPKVGAVNLLGVKNSALVSVIKARVNKIYKSNVFVYADMNAYQNVS
                     VFVTGNVNAPGLYQGLSSDSVIQYLDKAGGINLEYGSFRDIQILRNNSVIKNIDLYDF
                     LLKGQMDLFPFRSGDVILVGNVQNYAFVNGDVQRPFRFELSNDIKTLADLARVSGAKP
                     IVTNAIVKSYGEDHKLDVSAYNKMQFSKVLLRTGDEVEFHPEYVSENITISVNGEHNG
                     LKTLVVGKGTTLEDISKLIKANPQSNMQALQVFRKSVARTQKELINAQLKELETLALT
                     SGSVTAQGAAIRAQQAKTILEFIQRAKQVEPKGQIVIDNPKSYNSVILEDGDTINVPS
                     KNNLIIVQGEVSLPGAFVYDKGKDLRYYINLAGGYGERADTSKVLVIRSNGKAEKYHS
                     GIDMKRGDSVLVLPKVDSENLQIFSMLTQILYQIAIATNVVLNL"
     gene            6449..7396
                     /locus_tag="RJ266_001336"
     CDS             6449..7396
                     /locus_tag="RJ266_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HDV7355071.1"
                     /translation="MNTLEIAKEVFEKEAQAILDLAKNLDENFNQAVNLMLNTKGRCI
                     VSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHGDLGMLTPEDVLIAISNSGETEE
                     ILKIIPAIKKRKIPLIVMCGKKNSTLVKQSDIFLNIAVEKEACPLQLAPMSSTTATLV
                     MGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDL
                     VDVMTSGKLGLCVVLENEKLVGIITDGDLRRALKTSDKPRFDFRAKEIMSTNPKVVDA
                     DAMASEAEEIMLKHKIKEIIVGKEERVIGIIQLYAIGNV"
     gene            7396..9024
                     /locus_tag="RJ266_001337"
     CDS             7396..9024
                     /locus_tag="RJ266_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019260274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDV7355072.1"
                     /translation="MALLSVIIPFGLSKERPYIEERVIEKAKYFKSDENIEFIFVEGY
                     SSKNHELKNFIQANHHIYLKDMEQKAFSQGKCRNLGASCAHSNVLLFLDVDCYISLDN
                     FGKILKLIQIKNISQNINALIVLPVVYLNKEANEKLKQYNDKFWDILIQEDLFTARNT
                     WVKFFAPSSTSSIVINKHQFLRLGGNDENFIGHGYEDFDLFARILKACVSFEKMPTNL
                     SYDARNWNFFNFKGFRSWFSLLGYEACFYGIYMYHFYHIEPNQNAYMQNKDKNHQFFY
                     KHLKNIKKHDLKPLQVFKAKGEKVLMLFKDQNYDFKDISVYVGEIIYKNISDFFIDKE
                     LKYELLLNFLQQEKITKIFLDASIKLQFDDIDYCDIFYFQKGILPHSWFFTKNLDLDY
                     KQDLNLSEQKLYQVKKYFLTLKEDEKKVILDLLGQNNDDKCDLYEMLYYLINELYSFE
                     HEGIFYQIIIDKEKILMAQKHDKSFYPLRSFVYKPYLHELKSIRPFSFLMKILGLEYL
                     GAMISHTKFYRLARKLFFNPKGFFEDLRIKKARN"
     gene            9026..>9577
                     /locus_tag="RJ266_001338"
     CDS             9026..>9577
                     /locus_tag="RJ266_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002894130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDV7355073.1"
                     /translation="MLLKAKYKKNISFFFKSLLISLQNFLKQFKPKKYKAYNKYVIVS
                     AVYNVEKYLDDFFKSIINQRLDFKNNIHLICVDDGSTDNSANIIKKYQKKYPKNIIYL
                     YKENGGQASARNLGLKYLKENDLNIPWVTFTDPDDFLDRDYFYEVDSFLKNQNNIAMV
                     ATNIIFYREKRKILYKDTHALNFK"
BASE COUNT         3365 a         1169 c         1631 g         3412 t
ORIGIN      
        1 agataatttt taaggttgaa acttcgtttg tattatcata atggtaatat ttttggttga
       61 tttctttagc gataaaagga gtaagaaaag aagtgataaa aagggctaaa aaaaccgaag
      121 caaaaacaac aataaaacct gaaaataaaa aacttatgat ggtgattaaa atttgtacaa
      181 aatgaagagc ataaaaccac gcccaaaacg aatcttctcc aacgctaaat aaagaattaa
      241 aataatcaag caaggccgaa aagccaagta ctcctaaaaa aagcatcagt ataaggctaa
      301 aaatcaaagg aattaaggca aattttaaaa atttaagact taaaaaatct ttgattgcaa
      361 gttttaaaat atccaaatta tgcctttttg tagcattctt ctagtttttt ataaatagta
      421 tcaaaatcaa gctcttgttc taaaatttga gctaaaactt cattgtcttc tttgccattc
      481 caagtttttt tatagctacc atctttgtaa ccattgtttt gtctaaaaat atttaaaaca
      541 tttttaccta tgtaggtctt ataaagaatt tcaagattta gcccacattt aatagctaga
      601 gtaaaatagg ttgaaagtaa ttctccaaga ttaaatccaa aaccactgca tttatggata
      661 ataagctcta tatcatttaa aatgccataa atatcaccct cattagggta ttcttcttct
      721 ttgcaaaaat cttgaaacac gcttacagca ttaacttctg tggctatagc tttgaaatct
      781 ttattgtttt tatcgcgata ctcttcaagt aaaagactta aaataaaatg ccaaatatcg
      841 acaatctcta tacgcacatt ttcccaattt gtcggatttg aaatgttttt ccaatgtttc
      901 catgcaaaag agtctataag ttctgcacat tccatataaa tacagcgtct ccaactgatc
      961 agttttcctt ctttggtgta gccattttcc caatttaagc cgtttgtttc atcgttgagt
     1021 ttttgttgga gtttgagcat attttctaaa atttcgatat ttgtcattta aaactccttg
     1081 ataattttta atattatatg atttaagcgt aaagatttaa actatcatct gtcttatctt
     1141 gattttcctt ggctttttct tgttgttttt caagttgttt tttcatttgt tctaaaactt
     1201 catcaagaag ttttttgcta tcttcaagca tagaagtatt gatatcttta tcatttgttt
     1261 gattttgttt tagcaaatca ctgagtttat ttgtaaaatt attcataata gcattttgat
     1321 ggtttttatc atttggagtt ggtagaacat ttgccatttg catagctgat tcgataattt
     1381 cctttggctt taactctcca actttagaat ttgctaaaaa atctttgatc ataggttcaa
     1441 cttctttcat agcattttta atctcatcaa gatcattttg tgtgagttta gagccttcaa
     1501 aagtaaagct aaaaccatac tgacgcttaa gattaagagt tttaccttct tcattatttg
     1561 cataacttat gctttgattg tcatacatag ataaggctaa gtgtttgcca ctttttgttg
     1621 tataatccat cgaaaaactt tggtttttac tagcatcaat ttgcatttct tccccttata
     1681 tttatagttt aaatcaaaaa tcggttattt ttaaaaatat tttagtataa tttttataat
     1741 atggatgaaa gaattttaga atttataaaa aatgagcagc ttttatcttg ggctatgatt
     1801 gatgaaaaag gtgtttatac ggctagtgct ttttatgctt ttgatgaaaa gaatttagct
     1861 tttattatcg cttctcatga agatactaag catataagat tagccagtga aaattcaagt
     1921 atagcactta atatagccaa agaaagtaaa atagcctttt taaaaggtgt gcaagctaag
     1981 gccgagttta aaatggcaag taaggagcaa aagaaaattt atttttctaa atttcccttt
     2041 gctatacttg ataaaagtgc aaaaatttat gctttagagc ttttttggct taaatttact
     2101 aacaatgctt taggacttag taaaaagctt gagttttgta aaaaataaat ttttatgatt
     2161 ttgtttaaaa aaatgagtta tgattatagt ttatgtaaat tgttaggtat agaaaataaa
     2221 tgttaaatgt aattcacgct ttatttttta gagagttaaa aactagattt ggtgctaata
     2281 ggcatttggg ttatctttgg gtagttggag aaccaatgtc aataacactt gctattacag
     2341 taattgttac cattataaga gaatatcatc atcaagttat gcctgaagga atttctattt
     2401 ttatgttttt aatttcaggt attatgcctt attttatgtt tagaagtata gtaactcagc
     2461 ttatgaatgg tactcaggca aatttggctc tttttgctta taaacctgta aagcctatac
     2521 atgtatttat tgctagaact ttgcttgaat tttgtattta ttttgtgatt tttatcactg
     2581 tgcttttttt tgcaggatgg ttttttagat ttgatgtatt ccccgttcat ttactcggag
     2641 ttttattttg tattttttta cttatgtgct cagcttttgc tttggggatt tgttttgcta
     2701 ttatttggca ttttgtagag cctttaagaa ctttattagc ttattttagt atagtatttt
     2761 attggagttc tgggattata tttcctactt ggcttatgcc aagaccttta cttgatatat
     2821 tttattataa tcctttgctt cacataatgg agcttttaag atttaatttt tttgagaatt
     2881 atcctttgca agatgaatat agttattttt atgctatatt ttggatttta cttgttttat
     2941 ttataggact ttttatttac tactataata gacaagctct aacggcggca aaaaaagaat
     3001 gataaagcta attaatctaa ctaaatctta tcctttattt agcggtggaa gacattatgt
     3061 ttttaaaaat tttacttttg aatttcctga aaattgtagc ataggattga tggggggtaa
     3121 tggtgcaggt aagtccactc tcatgagact tttaagcggg gcagagcttc ctgatagtgg
     3181 taagataatt actaataaaa aattatcctg gcctttgggt ttaaatggag cttttcaagg
     3241 ttctttaacc gctagggata atgctaaatt tgtagctaga gtatatggtt ataaaggaca
     3301 agaacttcaa gaaaaagtaa aattcgtaga agattttgca gagcttggga aattttttga
     3361 tgagcctatg aagacttatt cttcgggaat gagtgctagg atagcttttg gacttagtat
     3421 ggcctttgat tttgattatt atttaatcga tgaagctgga gctgttggag atcctgcttt
     3481 tagggaaaaa agcgtaaaat tatataggga aagattaagc aaatcaaaag tgattatggt
     3541 atctcatgat gtagctgaaa ttaaagaatg gtgtgataaa ataatttata tgaaaaatgg
     3601 acaaattgcg gtttatgatg atgtagatga aggaatagct gtatatcaag gaaaagctta
     3661 atggaagaaa ataaaacttt attagaaaaa atcaaagatt taagcatatt tgattctttt
     3721 aaaattgttt ggtttataat gatttttgtt gtgatttatt atacattgat tgcagcacca
     3781 agatatgtaa gcacgatgat tttagatgtt agatcaacaa gtggagaaag tgctcaaaca
     3841 agtggaattt tgtctttgct tagtagcact tctacagcaa acgaagattt aaattatcta
     3901 aaaggttata tagaatcaag tgatatgtta agaattttag atgagaaaat caaacttaaa
     3961 gatctttacc aagaacaaca tatagatttg ccttttaaaa tttgggattc aagctcaata
     4021 gaatcttatc ttaaatatta ccaagcaaga gttaaggtgc atacggatga aactactaag
     4081 cttttgcagg tagaagtaga aggttttaca cctaaatcag ctcatttgat tgctcaaact
     4141 attatgcaag aaagcgaaaa gtttatcaac gaaatctctc ataaagcagc tagagaacaa
     4201 atggcttttg ctgaaaatga agtacaaaaa tacaaagaac gatatcaaaa agcacaaaat
     4261 ggtttgattg cttttcaaaa taaatatggg gtttttgatc ccttgaaaca agctgaagct
     4321 aaagcaagtt tggttgcgca aattgagact aatttagctc aaaaagaagc taaactttta
     4381 actttacaaa gctatatgaa tgatgcagca cctgaagtag tagcacttaa agcagaaatt
     4441 gaagcgatta aaaaacagct tttaagggaa aaatctaaaa tttcagctaa caattcttct
     4501 caaaagctta atgatttggc tgctaaattt caagatctaa ctatagaagc tacttttgcg
     4561 caaaaagctt atgaagcagc tttaaaagct tatgaaagtg ctagaataga agcattaaga
     4621 aaaataaaac aacttgtcat cattcaaagt ccagatattc cagaaagcgc aaaatatcct
     4681 gaaagaattt atgatatttt aacagcattt attgtattat ctttgatttt tgggattgtt
     4741 aaatttatta aaatgataat agaggagcat aagtattaaa atgaaaaaaa tattaatttt
     4801 actttttagt tgtattttat gttttggagc tgtggatgtt tcacaaatca tttcagcaga
     4861 ggatcaaggt tctactacaa ctagcataga tcaaaattta agctcaaatt atgatatagc
     4921 aaataaagaa aataatctta caaaaattca tcaaatttta gtatttggcg ctcatctttt
     4981 taatggaaat tttaaaaatt acaatcaaag agtttataac ccagattata agatcgcagt
     5041 tggtgatcaa atcagtctta aaatttgggg agctgttgag ttttcgcaag ttttagtggt
     5101 ggattctcaa ggaaatattt ttatccctaa agtaggagct gtaaatttac taggtgtgaa
     5161 aaatagcgcc cttgtaagtg ttataaaagc acgtgttaat aaaatctata aaagcaatgt
     5221 ttttgtttat gcagatatga atgcttatca aaatgtcagt gtttttgtaa caggaaacgt
     5281 taatgctcca ggactttatc aaggacttag ttcggattca gtgatccagt atcttgataa
     5341 agcagggggt ataaatttag aatatggaag ttttagagat attcaaattt tgcgtaataa
     5401 cagcgtgata aaaaatattg atttatatga ttttttacta aaggggcaaa tggatctttt
     5461 tccttttaga agtggagatg ttattttagt aggaaatgtt caaaattacg cttttgttaa
     5521 cggtgatgtg caaagacctt ttcgttttga actttcaaat gatattaaaa ctttagctga
     5581 cttagctaga gtatcaggtg ctaaacctat cgtaactaat gctatcgtaa aaagttatgg
     5641 tgaagatcat aaacttgatg tcagtgctta taataaaatg caattttcaa aagttttact
     5701 tagaacggga gatgaggtag aatttcaccc tgagtatgtt tctgaaaata taactataag
     5761 tgtaaatggc gagcataatg gtttaaaaac tttagttgtg ggtaaaggaa cgactttaga
     5821 agatatttct aaattaatta aagctaatcc acaatcaaac atgcaagctt tacaagtgtt
     5881 tagaaaaagt gtagctagaa ctcaaaaaga acttatcaat gctcagctta aagagcttga
     5941 aactctagct ttaactagtg gttctgttac agctcaaggt gcagctataa gagctcaaca
     6001 agcaaaaacg attttagaat ttatccaaag agctaagcaa gtagagccta agggtcaaat
     6061 tgtcattgat aatccaaagt cttataattc ggttatttta gaagatggtg atactattaa
     6121 tgtaccaagt aagaataatc tcatcatagt tcaaggtgag gtttctttac ctggagcttt
     6181 tgtgtatgat aagggcaaag atttaagata ttatatcaat cttgcaggag gttatggaga
     6241 aagagcggat acttcaaaag ttttggtgat acgaagcaat ggaaaagctg aaaaatatca
     6301 tagtggtata gatatgaaac gaggcgattc tgtgttggta ttgccaaaag tagatagtga
     6361 gaatttgcaa attttttcaa tgttaactca aattctttat caaattgcta ttgcaaccaa
     6421 tgttgtactt aatctttaag gtttaaaaat gaatactctt gaaatagcca aagaagtctt
     6481 tgaaaaagaa gcacaagcta ttttggattt ggctaaaaat ttagatgaaa attttaatca
     6541 agctgtgaat ttgatgctaa ataccaaagg gcgttgcata gtcagtggaa tgggtaaatc
     6601 aggtcatata ggtgctaaga tagcagctac tttagcaagt acaggaacgc caagcttttt
     6661 catccatcca ggagaggctt tgcatggaga tcttggaatg ctaactcctg aagatgtttt
     6721 aattgctatt tcaaattcag gagaaactga agaaatttta aaaatcattc cagctataaa
     6781 aaagcgtaaa attccactta tagtaatgtg tggtaaaaaa aattccaccc ttgtaaagca
     6841 aagcgatata tttttaaata tagctgtgga aaaggaagct tgtcctttgc agcttgctcc
     6901 tatgtcttcg acaaccgcaa ctttggttat gggggatgct ttagctgctg ctttgatgaa
     6961 ggtaagaaat ttcaagcctg atgattttgc tctttttcat ccagggggaa gtttgggacg
     7021 taagctttta accaaggtaa aagatcttat ggtttcaagt aaccttccta tagtgcatcc
     7081 tgataccgaa tttaacgatc ttgttgatgt gatgactagt ggaaaactag ggctttgtgt
     7141 ggtacttgag aatgaaaaat tagtgggtat catcactgat ggggatttgc gtcgtgcttt
     7201 aaagacaagc gataaaccaa gatttgattt tagagctaaa gaaatcatga gtacaaatcc
     7261 taaagtagtc gatgctgatg ctatggcaag tgaagcagag gagatcatgc taaaacataa
     7321 aatcaaagaa attatagtag ggaaagaaga aagggttata gggattatcc agctttatgc
     7381 tataggaaat gtttaatggc tcttttatct gttattattc cttttggctt aagtaaggag
     7441 cgtccttata tagaagaaag ggttattgag aaagcaaaat attttaaaag tgatgagaat
     7501 atagaattta tttttgttga aggatattca tctaaaaatc acgagcttaa aaattttatc
     7561 caagcaaacc atcatattta tcttaaagat atggagcaaa aagctttttc tcaaggaaaa
     7621 tgcagaaatt taggagcaag ttgtgcgcat tcaaatgttc ttttgttttt ggatgtggat
     7681 tgttatattt ccttggataa ttttggaaaa attttaaaac taattcaaat taaaaatatt
     7741 tctcaaaata tcaatgcttt aatagtttta cctgtagtgt atcttaataa agaagctaat
     7801 gaaaaattaa aacaatacaa tgataaattt tgggatattt tgatacaaga ggatttattt
     7861 acagcaagaa atacttgggt aaaatttttt gccccaagtt ctacttcaag tattgtgata
     7921 aataaacatc agtttttaag attaggcgga aatgatgaaa attttattgg acatggttat
     7981 gaagattttg atctttttgc tagaatttta aaagcttgtg tgagttttga aaaaatgcct
     8041 actaatttaa gttatgatgc tagaaattgg aattttttta actttaaagg ttttagatct
     8101 tggttttcat tacttggtta tgaggcttgt ttttatggaa tttatatgta tcatttttat
     8161 catatagaac ccaatcaaaa tgcttatatg caaaataaag ataagaacca tcagtttttt
     8221 tataagcatt taaaaaacat caaaaaacac gatttaaaac ctttgcaagt ttttaaagcc
     8281 aaaggtgaaa aagttttaat gctttttaaa gatcaaaatt atgattttaa ggatattagt
     8341 gtttatgtgg gagaaatcat ttataaaaat ataagtgatt ttttcataga taaagagtta
     8401 aaatatgaac ttttgttgaa ttttttacaa caagaaaaaa tcactaaaat atttttagat
     8461 gcaagtataa aactacaatt tgatgatata gattattgtg atatttttta ttttcaaaaa
     8521 ggcattttac ctcattcttg gttttttaca aaaaatttag atttagatta taaacaagat
     8581 ttgaatttaa gtgagcaaaa actttatcaa gttaaaaaat attttttaac tttaaaagag
     8641 gatgaaaaaa aagtcatttt ggatctttta ggccaaaata atgatgataa gtgtgatttg
     8701 tatgaaatgc tttattattt gattaacgag ctttatagtt ttgagcatga gggaattttt
     8761 tatcaaatca tcattgataa agaaaaaata ctgatggcac aaaaacatga taaaagcttt
     8821 tatcctttaa gatcttttgt ttataaacct tatttacatg agcttaagag cataaggcct
     8881 ttttcatttt tgatgaaaat tttaggttta gagtatcttg gtgctatgat ttcacatact
     8941 aaattttatc gcttggcaag aaaattgttt tttaatccta agggattttt tgaggattta
     9001 agaattaaaa aggctagaaa ttgatatgtt gttaaaagca aagtataaaa aaaatatatc
     9061 tttcttcttt aaaagtttgt taatttccct acaaaatttt ttaaaacaat ttaaacctaa
     9121 aaaatacaaa gcctataata aatatgtcat agtttcagcg gtttataatg tggaaaaata
     9181 tttagatgat ttttttaaat ctataattaa tcaaagattg gattttaaaa ataatattca
     9241 tctaatttgc gttgatgatg gttctactga taattcagct aatatcatta aaaaatatca
     9301 aaaaaaatac ccaaaaaata ttatctatct atacaaagaa aatggtggtc aagcaagtgc
     9361 gaggaatttg ggtttaaaat atttaaagga aaatgattta aatattcctt gggtaacctt
     9421 tactgatcct gatgattttt tagataggga ttatttttat gaggtagata gttttttaaa
     9481 aaatcaaaat aatatagcta tggtggctac aaatattatt ttttataggg aaaaaagaaa
     9541 gattttatat aaagatactc atgctttaaa ttttaaa
//
LOCUS       DAPIWB010000058         9130 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.059, whole genome shotgun sequence.
ACCESSION   DAPIWB010000058 DAPIWB010000000
VERSION     DAPIWB010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9130)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9130)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9130
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.059"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            170..613
                     /locus_tag="RJ266_001339"
     CDS             170..613
                     /locus_tag="RJ266_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDV7355074.1"
                     /translation="MFDFLYNDISYLGLFMVCFLSSTLLPLASEAFVLGFIKLDFNPN
                     LVLIVATLGNTLGSLSTYALAYFGKEKILEKYFSKSLKKLENFNANFAKFGSIFAFFT
                     FLPLVGDLFALGLGFAKYSFLKTIFFILLGKLSRYTFIIFIANSF"
     gene            complement(569..1576)
                     /locus_tag="RJ266_001340"
     CDS             complement(569..1576)
                     /locus_tag="RJ266_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HDV7355075.1"
                     /translation="MRLILDTDIGNAIAGANTDDGLALALILSSKEIKLEMLSTVCGN
                     VPSLVAYSVAKDLFKRLNLNIPVYLGANEALKEPSKAWRQRLDESVKNFKLEYLWENI
                     KSPEILENINPDAIFKMGELVGKNPKEISICAIGPLTNIAMTMKIFKDFDINLKELFI
                     MGGSFDMPYYTKDTNFGFDPEAASIVLNSRAKITLVPYNATMQTLLTHEDLKELQGKN
                     ILCDFIVETLGVWIDYASKTRGTKGTWIHDALTIACALDSSIADFDECYADVICDSSL
                     ARGMSWRCFREPKMSMGVDLSTKNCVKILKNVDNARLLKLIKERLLKGVCYENYESIT
                     T"
     gene            complement(1573..2934)
                     /locus_tag="RJ266_001341"
                     /pseudo
     CDS             complement(1573..2934)
                     /locus_tag="RJ266_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343777.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MHS family MFS transporter"
     gene            3098..5737
                     /gene="polA"
                     /locus_tag="RJ266_001342"
     CDS             3098..5737
                     /gene="polA"
                     /locus_tag="RJ266_001342"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HDV7355076.1"
                     /translation="MKTLTIIDTFGFFFRLYYALKGFKNSQGQASGMISGFANFIYSL
                     KNEYKSDYIVFALDSKGKTFRSEIDPNYKQNRTPPPPELLEQIPICIKMIEKMGFISV
                     SQEGYEADDIIASFVKTCENRDIFVRIITQDKDLYQLIKDGKTSIYSPISKNDYDEAA
                     CLEKYGVKPNQIRDFLALCGDSSDNIPGVKGIGAKGAKTLLDEFGSIEGIYENLTLIR
                     NERSRNLLLEGKENAFLSKKLASLYENLEVQDLIEKAIYPDEEPLLKILEILEHYELN
                     TLLKKLRQNPDNKDKNLGFKATLIQDENKLFEILNTLDKESIIAFDTETTGLDTKEAK
                     IVGFSFCMNENEAFYVPLTHNYLGVGEQISLQNAKKAIEVIFNHFVIGHNLKYDFKII
                     QNNFDLNLPQKYADTMILAWLKNPSLRVNMDDLALRLFNYETLHFESLVKKGENFASV
                     ELEKACKYAAEDAYITLRFYLYFLKNLETPLLELAKNCEFDFIKIIIMMEENGIKLDT
                     NALEILMKKFENEIKNLSEEIYTLCEDRFNLNSPKQMGDILFEKLKLPSGKKGKTGYS
                     TDEKVLNILLDKHPVIAKILDYRELAKLYSTYCEPLLKLALKDKNSRIYSSFLQTGTA
                     TGRLSSKDPNLQNIPAHGQYAKDYKSCFVAKDGFSFISLDYSQIELRMLAHFSEDEKL
                     LNAFANDEDIHARTAIMIFGESNYETRSVAKSINFGLIYGMGYKTLSQNLKIEANLAK
                     SYIEKYFENFTSIKKYFEKVKNEAKQNGFITTLSGRKRYFDFENAKPMQIAMYERESI
                     NSILQGSAADVIKLAMLEINKELNEDKKLILQIHDELIFEVKDDLCENFVKKTRDIME
                     NIVKLKVKLKTSSSIAKNWGDLK"
     gene            5753..6529
                     /gene="motA"
                     /locus_tag="RJ266_001343"
     CDS             5753..6529
                     /gene="motA"
                     /locus_tag="RJ266_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HDV7355077.1"
                     /translation="MDLSTILGMVLAVTSISVGDILEGGNPLHVVHLSSFLIVMPTAA
                     FCAMTSTHKKIVKAAYKELKVVFKGSGVNLPERIAQLIEFAIIARRDGLLALESRTSE
                     IENEFLKNAMMMLVDGKSFEEIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVG
                     AVFGLILALKLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGKKLKANGMDLVKEQ
                     IVITEAIKGIAEGANPRDLEAKLFNFLSHDDPRISQFDKG"
     gene            6532..7275
                     /gene="motB"
                     /locus_tag="RJ266_001344"
     CDS             6532..7275
                     /gene="motB"
                     /locus_tag="RJ266_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HDV7355078.1"
                     /translation="MVKKHKCPECPAGEKWAVPYADFLSLLLALFIALWAISKTNPAK
                     VEALKTEFVKIFDYTSTQTVKEEAKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRL
                     QAALDQSDNQVALNLPSKVEFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGY
                     TDNSDSIIRSYELAYQRAENVLKYFIEGGANLKNISIKSYGLNNPINGNPQALENNRV
                     EIYFKVDTADTSTQKSVLELINKIGTKAP"
     gene            complement(7281..8369)
                     /gene="flhB"
                     /locus_tag="RJ266_001345"
     CDS             complement(7281..8369)
                     /gene="flhB"
                     /locus_tag="RJ266_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhB"
                     /protein_id="HDV7355079.1"
                     /translation="MAGEDQEKTEEPTSKKIEDARKEGNVPKSQDAAAIVTLIIGVTI
                     TLFMMSFMGERIVNLYRYYQSFIGVEFDLRIIQAIMIKSIFEVLIILAPIVLSIMIAG
                     VLGNIMQFGFIFTTKPIMPNLGKINPLKGLKNLFSLKKIVESIKIILKVGIVFTIAFI
                     VLLKFMQELPRVELYTMVAQLTWLRDRAIVLAAIVIVAFLIIAVLDVFLVRFQYFKGL
                     RMSKQEIKDEYKQMEGDPQVKGRIRRLQMEAARRRMVQDVAGADVVITNPTHYAVAIR
                     YDTSKEQAPRVVAKGVDFLALRIKQVAYENNVVVYENPPLARELYKACDVNDLIPREM
                     FKAVAEVLGFVYNTNNKSRLAGQVKKGN"
     gene            complement(8488..9084)
                     /locus_tag="RJ266_001346"
     CDS             complement(8488..9084)
                     /locus_tag="RJ266_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HDV7355080.1"
                     /translation="MIVTKKALDFTAPAVLGNNEIVQDFNLYKNIGPKGAVVFFYPKD
                     FTFVCPSEIIAFDKRYQEFKNRGIEVIGISGDNEFSHFAWKNTPVNQGGIGQVKFPLV
                     ADLTKQIARNFDVLYAEAVALRGSFLLDADGTVRHAVVNDLPLGRNIDEMLRMVDTML
                     FTNEHGEVCPAGWNKGDEGMKANPKGVAEYLGKNEAKL"
BASE COUNT         3323 a         1568 c         1311 g         2928 t
ORIGIN      
        1 tttttcaaag ccatcttttc aaaatttatt ttatttttat cattgtaggt gctatttttt
       61 taagattaga tcttggaatt ttaaatttgt attttgaaat tatcaaatct tttttatttc
      121 ctatccatct ttttattttg tttattttaa tgcgtaaaaa agagttttaa tgtttgattt
      181 tttatataat gatattagct atttagggct tttcatggtg tgttttcttt caagcacact
      241 attaccctta gcaagtgaag cctttgtttt aggctttata aaacttgatt ttaatccgaa
      301 tttggtactt atcgtagcca ctttgggtaa taccttagga agtttaagta cttatgcttt
      361 agcgtatttt ggaaaagaaa aaattttaga aaaatacttt agcaaatcct tgaaaaaatt
      421 agaaaatttc aatgctaatt ttgctaaatt tggaagtata tttgcttttt ttactttttt
      481 acctttagtg ggagatcttt ttgccttggg acttggtttt gcgaaatatt cttttttaaa
      541 aactatattt tttatcttac ttggaaaatt aagtcgttat actttcataa ttttcatagc
      601 aaactccttt taaaagcctc tcttttataa gttttaaaag ccttgcatta tctacatttt
      661 ttaaaatttt aacacaattt ttagtgctta aatccacccc catactcatt tttggttctc
      721 taaaacaacg ccaactcata cctcttgcca aagaactatc gcaaataaca tcagcataac
      781 actcatcaaa atctgcaata ctagaatcta atgcgcaagc tatcgttaaa gcatcatgta
      841 tccaagttcc ctttgtacca cgtgttttag aggcataatc aatccaaaca cctaaagttt
      901 caacgataaa atcacataaa atattcttac cttgcaactc ttttaaatcc tcgtgtgtta
      961 ataaagtctg catggttgca ttataaggta caagtgtaat tttagctctt gaatttagca
     1021 ctatactagc cgcctcagga tcaaaaccaa aatttgtatc tttagtgtaa taaggcatat
     1081 caaaactgcc gcccataata aaaagctctt taagatttat atcaaaatct ttaaaaattt
     1141 tcatagtcat agcgatattt gtcaaaggtc ctatcgcaca aatagaaatt tctttaggat
     1201 ttttacccac caactcaccc attttaaaaa tcgcatcagg atttatattt tctaaaattt
     1261 caggactttt tatattttcc caaagatatt caagtttaaa atttttaaca ctttcatcaa
     1321 gtctttgacg ccaagcttta cttggttctt ttagggcttc attcgctccc aaataaactg
     1381 ggatatttaa atttaaacgt ttaaataaat ccttagccac actataggca acaaggcttg
     1441 gaacattacc gcaaactgtg cttagcattt caagtttgat ttctttagat gacaaaatca
     1501 aagcaagtgc taaaccatca tcagtatttg ctcctgcaat agcattgcct atgtccgtgt
     1561 ctaagataag tctcatatcg catcttctat tttatttaaa tctctacctc tagtttctgg
     1621 cgcaaaaaat gtagtcacaa aacctatacc tgcagttaat acaaaatatg tcgcgatagg
     1681 ccaccaagtg ccataatatg caagcaaagc agaagccacc ataggcgctg ttcctcctga
     1741 aagaataaaa cctagctcct tagcaaaagc catttttgta taacggtttt ttaccccaaa
     1801 aagctccaca ccccaagccg cttgcacacc aaaaatccct aaagatgcta aagacatacc
     1861 tacaataata gttaaaatca caataatttc atttttacta tctaaaagca taaaagcagg
     1921 aaaagcataa atcattaaaa gcaaacaaaa cattctataa gtaatacatc ttccaaattt
     1981 atcacttaaa taacctgcca aaggaataac taaaaaccct accaatgaag ctatcatcac
     2041 tgctgtagta gctactgatt tgtctaaaag taaaatttta gtcacataac ctacaataaa
     2101 accttgcgca agataagaag gtccattttc gcctattctt aagcccacca tagtccaaaa
     2161 agcacgactt ctttgccaaa aacttctttc atcttttttc atatgctttt cgttattaag
     2221 acgcaatttc atcatttcat ttttttgctt ttcaaaaaca ggggtttctt tgacatgaaa
     2281 acgaatatat acagcaaaaa gagcgattaa aatacttccc ataaaaggaa ctctccagcc
     2341 ccattcttta aaacttgctt catccatttg taccatcaaa agccatacaa aagacgcaag
     2401 caaagttcca ctatttgatc ctaaagcaat cacagaagaa acaagccctc ttctcttgct
     2461 aggagcatat tctcctagca taactgttcc acctgaaagt tcagctcctg cgccaaaacc
     2521 ctacataaaa cgtaatgcaa ccaaacaaat aggcgcccaa acaccaatca ctgcataact
     2581 tgggataaaa cctatcagag tagttgaaat tcccattaaa gctattgtag ccatcataac
     2641 attttttctt ccgtgtttat cacctaaata accaaaaaac aaagccccaa taggtcttgc
     2701 aataaaacct atgccataag ttacaaaact aagcaaaagt gcaattactg gagtttgctc
     2761 aggaaaaaat acttctgaaa aaattgttgc agctgctaaa ccataaagtg caaaatctgc
     2821 atattccata gcagttccca accagcaaga aaaaactgcc tttttaaaaa cttttctacc
     2881 ttcaggtgtg ttaaaattct tatctgcaat tccatcaatt tgctgatttg tcattacatt
     2941 ttccttacat tattcatata aaatttttac tctactcgat attatgacta aaaattgaag
     3001 tattttcgct taaatatctt taaatttcga gacattttaa gcaaaatttt gaaataatat
     3061 aaccaaaaaa tatattttat caaaagaaga aattattatg aaaactttaa ctattattga
     3121 tacttttgga ttttttttca gactttacta cgcattaaaa ggttttaaaa attcacaagg
     3181 acaagctagt ggaatgatta gcggttttgc aaattttatt tatagcttaa aaaatgaata
     3241 taaaagtgat tatattgttt ttgcattaga ttccaaagga aaaacttttc gtagcgaaat
     3301 tgatccaaac tataaacaaa atcgcactcc accgccacct gaacttctag aacaaattcc
     3361 aatttgcata aagatgatag aaaaaatggg tttcataagc gtttctcaag aaggttatga
     3421 agctgatgat atcattgctt cttttgtaaa aacttgtgaa aatagagata tttttgtacg
     3481 tattatcact caagataaag atctttatca actcataaaa gatggcaaaa caagcattta
     3541 cagtcctatt tctaaaaacg actatgatga agcagcgtgt ttagaaaaat acggagtaaa
     3601 acctaatcaa atcagagatt ttttagctct ttgcggagat agttctgata atattccagg
     3661 cgttaaaggt ataggcgcaa aaggagccaa aaccttactt gatgaatttg gcagcataga
     3721 aggaatttat gaaaatttaa ctctaatacg caacgaaaga agtcgtaact tgcttttaga
     3781 gggtaaggaa aatgcatttt taagcaaaaa attagcttct ttatacgaaa atttagaagt
     3841 gcaagatctt atagaaaaag caatttatcc tgatgaagaa cctcttttaa aaatacttga
     3901 aattttagaa cattacgaac ttaatacttt gcttaaaaag ctgcgtcaaa atcctgataa
     3961 taaagataaa aatttaggtt ttaaagccac tttaatacaa gatgaaaaca aactttttga
     4021 aattttaaat acccttgata aagaaagtat tattgctttt gataccgaaa ccacaggact
     4081 tgatactaaa gaagcaaaaa ttgttggttt tagtttttgc atgaatgaaa atgaagcctt
     4141 ttacgtgcct ttaactcata attatcttgg agtaggtgag caaatctcat tgcaaaatgc
     4201 caaaaaagct atagaagtaa tctttaatca ttttgttata gggcacaatc tcaaatatga
     4261 ttttaaaatc attcaaaaca attttgactt aaatttacct caaaaatacg cagatacaat
     4321 gattttagca tggcttaaaa atccttcttt aagagtaaat atggatgatt tagccttaag
     4381 actttttaat tacgaaacct tgcattttga aagccttgtt aaaaaaggag aaaattttgc
     4441 aagtgtagaa cttgaaaaag cttgtaaata cgctgcagaa gatgcttata tcactttaag
     4501 attttatctt tattttttaa aaaatcttga aactccttta ttagaacttg ctaaaaactg
     4561 tgaatttgat ttcattaaaa tcattataat gatggaagaa aatggcataa agcttgatac
     4621 aaatgcactt gaaatcctta tgaaaaaatt tgaaaatgaa atcaaaaatt taagtgaaga
     4681 aatttatact ctttgtgagg atagatttaa tctaaattca cctaaacaaa tgggtgatat
     4741 actttttgaa aaactcaaac tcccaagcgg aaaaaaagga aaaacaggat attctaccga
     4801 tgaaaaagtt ttaaatatac ttttagataa acatcctgta attgctaaaa ttttagatta
     4861 tagagaactt gccaaacttt attccactta ttgcgaacct ttgttaaaac tagcgttaaa
     4921 agataaaaat tcacgcattt attcaagttt tttacaaact ggaaccgcta caggacgtct
     4981 ttcatctaag gatccaaatt tgcaaaacat ccctgcacac ggacaatatg caaaagatta
     5041 taaatcttgc tttgtagcta aagatggatt tagttttatc tctcttgatt attctcaaat
     5101 cgaactgaga atgcttgcac attttagcga agatgaaaaa cttttaaatg cttttgccaa
     5161 tgatgaagat atacacgcaa gaacagcaat aatgattttt ggtgaaagca attatgaaac
     5221 cagaagtgtt gcaaaaagta taaattttgg acttatttat ggtatgggtt ataaaacctt
     5281 aagtcaaaat ttaaaaatag aagctaattt agccaaatct tacatagaaa aatattttga
     5341 aaattttact agcattaaga aatattttga aaaagttaaa aacgaagcta aacaaaatgg
     5401 ttttatcact actttaagcg gtcgcaagcg ttattttgat tttgaaaacg caaaacctat
     5461 gcaaattgcc atgtatgaaa gagaaagcat taattcaatc ttgcaaggct cagcagcaga
     5521 tgtaatcaaa cttgcaatgc tagaaatcaa taaagaatta aatgaagaca aaaagcttat
     5581 tttgcaaatt cacgatgaat taatttttga agtaaaagac gatttgtgtg aaaattttgt
     5641 aaaaaaaact agagatatta tggaaaatat agtaaaatta aaagtaaaat taaaaacaag
     5701 ttcaagtatc gccaaaaatt ggggcgattt aaaataatca aggagataat taatggatct
     5761 ttcaaccata ttaggaatgg tgcttgcagt tactagtatt tcggtaggag atatactaga
     5821 aggtggtaat cctttacatg ttgtgcatct ttcttccttt ctcatagtta tgccaacagc
     5881 tgcattttgc gcaatgactt ctacgcataa aaaaattgta aaagcagcct acaaagaact
     5941 caaagttgtt tttaaaggtt ctggagtaaa tttacccgaa aggatagccc agttaataga
     6001 atttgctatt attgcaagac gagatggtct tttagcgtta gaatcaagaa ccagtgagat
     6061 tgaaaatgaa tttttaaaaa atgctatgat gatgcttgta gatggtaaaa gctttgaaga
     6121 aattcatgaa agcatggaaa tacaaactga acaacttgaa gagcattata aagaatgtgc
     6181 agaatattgg atagtatttg gagagacttg tcctaccatg gggcttgttg gagcggtttt
     6241 tggacttatt ttagctctta aattactaga caatcctcaa gcaatggcag caggtatttc
     6301 aggtgctttc acagctacag ttacgggaat ttttggcgct tatgcacttt ttgctccttg
     6361 gggaaaaaaa ttaaaagcta atggaatgga tcttgtaaaa gagcaaattg ttattactga
     6421 agctataaaa ggaattgcag aaggtgctaa tcctagagat ttagaagcta aactttttaa
     6481 cttcttaagt cacgatgatc caagaatttc acaatttgac aaaggttaaa aatggttaaa
     6541 aaacataaat gcccagaatg tccagcaggt gaaaaatggg ctgtgcctta tgcagacttt
     6601 ctaagtttgc ttttagcact ctttattgct ctttgggcaa tttctaaaac aaatccagct
     6661 aaagtagaag cattaaaaac agaatttgta aaaatttttg attacacctc tacccaaaca
     6721 gtcaaagaag aagctaaaac tcaagaaaag tacaaaggcg cagcaaaaga agaaagcgat
     6781 gaactcaaat cgttaaaaca aatgactatg acacagcaag aaactatcaa acgtcttcaa
     6841 gcagctctag atcaaagcga taatcaggtt gctcttaacc ttccatctaa agttgaattt
     6901 gaaagaggta gtgctcaaat cgtttcagct gatatacaag attatttaaa acgtatggct
     6961 gagctaacaa catatttgcc acctcaagca aaaatagaaa ttagaggcta tacagacaat
     7021 agcgactcta ttataagaag ttatgaactc gcctaccaaa gagcggaaaa tgtattaaaa
     7081 tattttatag aaggtggagc aaatttgaaa aatattagca ttaaaagcta cgggcttaat
     7141 aatcccatca atggaaatcc gcaagcccta gaaaataata gagtagaaat atattttaaa
     7201 gtcgatacgg cagatacaag cactcaaaaa tcagttcttg aacttatcaa taaaatagga
     7261 actaaagcac cttaaaagtt ttagtttcct ttttttactt gaccagctaa acgactctta
     7321 ttatttgtat tataaacaaa tcctagtacc tcagctacag ctttaaacat ttccctagga
     7381 atgagatcat taacatcgca agctttataa agctcccttg ctaaaggagg attttcataa
     7441 actacaacat tattttcata ggctacttgt tttatacgaa gtgcgagaaa atccactcct
     7501 ttggcaacaa ctctaggagc ttgttcttta cttgtatcat aacgaatagc tacggcataa
     7561 tgagttggat ttgtaatcac tacatccgca cctgcaacat cttgaaccat gcggcgacgc
     7621 gcagcttcca tttgaagtct acgaattcta cctttaacct gaggatctcc ttccatttgt
     7681 ttatattcat cttttatttc ttgtttgctc atacgcaaac ctttaaaata ctgaaaacgc
     7741 accaaaaaaa catctaaaac agcaataatt aaaaaagcaa ctataacaat agctgctaaa
     7801 acaatagctc tgtctcttag ccaagtaagc tgtgcaacca tagtataaag ctcaactctt
     7861 ggaagctctt gcataaattt aagtaaaact ataaaagcta tagtaaaaac aatgcccact
     7921 tttaaaataa tttttatact ttcaacaatt tttttcaatg aaaaaaggtt ttttaaacct
     7981 tttagaggat tgatttttcc taaatttggc ataataggtt tagttgtaaa aataaaacca
     8041 aattgcataa tatttcccaa aaccccagca atcataatac ttaaaacaat aggcgcaaga
     8101 ataattaaaa cctcaaaaat gcttttaatc ataatggctt gaataatacg caaatcaaat
     8161 tcaacaccaa taaaactttg atagtatcta tataaattta caattctctc gcccataaaa
     8221 ctcatcataa ataaagttat agttactcca attatcaaag ttacaatagc tgccgcatct
     8281 tgagactttg gaacattacc ttctttacgc gcatcttcta tctttttgga cgtgggttct
     8341 tctgtttttt cttgatcttc gcctgccata ttttagccta agtaaaaatt ttaatatgtg
     8401 tgtaaaatta tagtagaaaa tttatgaatt tcaattaaag aataaaaatg aagaaaaagc
     8461 ctcgtaaaga ggctttatac taagaaatta aagtttagct tcgtttttgc caagatattc
     8521 agccacgcct ttagggttag ctttcatacc ttcatcgccc ttattccatc ctgcaggaca
     8581 aacttcacca tgctcatttg taaaaagcat agtatcaacc attcttaaca tttcatctat
     8641 atttctacct agtggcaaat cattaaccac agcatggcga actgttccat cagcatcaag
     8701 caagaacgaa ccacgaaggg caactgcttc tgcataaagt acatcaaaat ttctagcaat
     8761 ctgcttagtt aagtcagcaa caagcggaaa tttaacctga ccaataccac cttgatttac
     8821 tggagtattt ttccaagcaa aatgtgaaaa ttcattatct cctgaaattc caattacttc
     8881 aatgccacga tttttaaatt cttgatatct tttgtcaaaa gctataattt ctgaaggaca
     8941 aacaaaagta aaatcttttg gataaaagaa tactaccgct ccttttggac ctatgttttt
     9001 ataaagatta aaatcttgaa caatttcatt gtttcccaat actgctggag cagtaaaatc
     9061 taaagctttt ttagtaacta tcatattttc tcctaaataa taaattttat tgataacgaa
     9121 attatatcgt
//
LOCUS       DAPIWB010000059         9045 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.060, whole genome shotgun sequence.
ACCESSION   DAPIWB010000059 DAPIWB010000000
VERSION     DAPIWB010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9045)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9045)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9045
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.060"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            63..1817
                     /locus_tag="RJ266_001347"
     CDS             63..1817
                     /locus_tag="RJ266_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355081.1"
                     /translation="MFDKIHYYHFNANYEKCLNLSEQFLKESPKFALEFATLSSYKLS
                     LFQKALYYAQELFSLNPTSFNGLMLAKSYIENLRLDEALNLLQTLLTRKDDLEDELKL
                     ELAFIYKLSNKLEESEQIFKELLSKDMYNLNLWKNYAEIYFKHDFTKALNAHEHLCHF
                     MQDLIDKLQKGIIAEQTNLNLVKLEDRLHSKTKENLTISKIEDFLTHQILPQKAYLLF
                     KLFRISDSLELFQSLQEANQHHAQFWQNYAKVLEFNSNYQEAYHAYKKCLSLDSHATY
                     QFDLAYLLMRMGVDDNFEEGKKYYESRLFYAHNETFSTYHYNESLKAFNKFGVDAFKN
                     KEVLVFCEQGFGDTIMYARCLEKLCKIASKVLFAPQSAMYEMFKNQIKFLNQNDDIFK
                     NVKVLKNLPTNFDYAIPICSLPFFIDIKLDEILRLKTPILPQKKRIIKEKKLGIFYAT
                     PNAENSDLLRNVKFEFLFDVLRDLDYEIISFQMQLKEELPKVIEDRSKLIKNWNDTLN
                     YLYDIDCMLSIDSAIAHLSLAMDIPTIVLLHPRFDWRWGKFENPKSYFWPKAKCFIIK
                     EQEETKRNLQKLIKDILN"
     gene            complement(1821..2588)
                     /locus_tag="RJ266_001348"
     CDS             complement(1821..2588)
                     /locus_tag="RJ266_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355082.1"
                     /translation="MKMRYCFILFLSLVLSSNLLANNFSQKKVIKIEKSADSFEVIDL
                     NQNVANPNLNQQKALFDSSTLIEKKSQITKDKDIDFAIVLTSRKNFGYFLDGFRVSDK
                     EFSTLFAKNLIQSLKLNWVNSAANGIYQSPKTLSYFSPKDAKLINVSPFLTQEKDKAK
                     MYAKFTDYVVVVNLQDFYVNITNYFITTSKEGVASVNFKIISTSNGKILAAKNAELNL
                     TLKDQDAKQNYQDIINQMPKMLADVIKNQIFHLKLLN"
     gene            complement(2629..3393)
                     /locus_tag="RJ266_001349"
     CDS             complement(2629..3393)
                     /locus_tag="RJ266_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HDV7355083.1"
                     /translation="MLNLDKFLEIAINASNQASKAILEERKNFKTWEKEDKSPLTSAD
                     LASNKILNDILGSTDIKILSEEKLLSKEECEELKTFWLIDPLDGTSGFLKGSDEFCVM
                     ISLVHDNRPVLSLIQNPSKGDIFYAHAKTKVYKNDKPLQIDQQEYEKNKYKALLSVNH
                     LSKEDEDFAKEHQLEAINIGSGLKFCAILEARAGVYKRFEKLNIWDIVAGDFLINQNG
                     GFMGDFSKKYILYNPLSYKSSPFICVSSRNFLQDFL"
     gene            complement(3473..4741)
                     /locus_tag="RJ266_001350"
     CDS             complement(3473..4741)
                     /locus_tag="RJ266_001350"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HDV7355084.1"
                     /translation="MSNSVTITDNRNGKSYEFPIYDGTTGPSVVDMSSFYKQTGMFSY
                     DEGLTSTATCKSKITYIDGENGILMHRGYPIEWLAENKLYLDVVHLLLYKELPDATRL
                     EAFRYEMKKRSFIHEGMHRLFDSFPDNAHPMAVLQGAVSSLSAFYPDHLNMNVKEEYM
                     EMAARIVAKIPTIVATAYRYKHGFPMAYPNLDRGFTENFLYMLRTYPYDHVELKPIEV
                     KALDTVFMLHADHEQNASTSTVRAVGSTHAHPYACIAAGIGALWGHAHGGANEGVIRM
                     LEQIGSVDRVDEFIKRAKDKNDPFRLMGFGHRVYKNFDPRAKVLKKLRDQLIDELGID
                     TNLIKVATRIEEIALSDDYFVQRGLYPNVDFHSGLILKALGIPNEMFATLFVIGRTPG
                     WIAQWIEQKEQESLKIVRPRQLYLGETSKI"
     gene            complement(4856..6031)
                     /locus_tag="RJ266_001351"
     CDS             complement(4856..6031)
                     /locus_tag="RJ266_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDV7355085.1"
                     /translation="MHQSVIDTQALIDLKILIVIALCLLFSPHIAKILRLPLSATEII
                     LGAIIAHFGFIGKSENFALLANVGFYYLMFIAGMEVNLRAFFNMDKEIAKKSFFYIFL
                     LYALSSFIVWIFGLSLVFVIIIPVMSVGLLSLLFKDFGKECYWLNIAMIVATLAEVIS
                     IVLLTIAGAFLREGTGIIDVAQSILYLNIFLGLCLLGFKMLGVLFWWYPQLKVVLMPW
                     EDKNEKDIRFCMAIFILIIVAMVITKLEIVLGSFIAGSFIATFFDHKKDLEHKLSTFG
                     HGFLIPIFFIHIGSTFDLKMILDYKIVLQAFLLMFVMVGLRILCASVFLKRIGFKNMI
                     LFSLSHSMPLTLLIATATLGYSGKVIDEKLYSALILTALFEAIIVMSMIKFLSNSKK"
     gene            complement(6012..6848)
                     /locus_tag="RJ266_001352"
     CDS             complement(6012..6848)
                     /locus_tag="RJ266_001352"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase"
                     /protein_id="HDV7355086.1"
                     /translation="MQIMLCAISNIASGNCSEDCKYCTQSAHVKTDIQKYRRKELSQI
                     VLEAKMAKKNEALGFCLVTAGLGLDDEKLEYVCEAAKAVQKEVPNLLLIACNGMASVE
                     QLKELKKAGIFSYNHNLETSKEFFPQICTTHTWESRFQTNLNAKEAGLMLCCGGIYGM
                     GESEEDRLSFRKSLQELQPFSTPINFFIANENLKLQVPRLSADEALKIVRDTKEALPQ
                     SVVMVAGGREVVLRERQYEIFQAGAGAIVIGDYLTTKGEEPSQDIIKLKEMGFTFASE
                     CH"
     gene            complement(6850..8952)
                     /gene="topA"
                     /locus_tag="RJ266_001353"
     CDS             complement(6850..8952)
                     /gene="topA"
                     /locus_tag="RJ266_001353"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HDV7355087.1"
                     /translation="MKKNLIIVESPAKAKTIGNFLGKDYEVIASKGHIRDLPKSSFGI
                     KIEDDEFIPEYRITSDHSALVKELKSKAKDAKEVYLATDEDREGEAIAYHIAKAIGKD
                     ENTLPRIVFHEITKSAIENALKNPRKLNMHSVNAQQTRRLLDRIVGYKLSPLLGQKIQ
                     RGLSAGRVQSAALKIIVDREKEIRAFVPLEYFSIDMIFQKDLDAELVEFDKAKIEKLT
                     ITNKDRAKLILEACKNEVYSISDIESKERKIAPPPPFMTSTLQQSASNRLGFNPKKTM
                     MIAQKLYEGVNTHEGVMGVITYMRTDSLNLAKEAVENARKFIQANFDKDYLPSKANVY
                     TTKTKGAQEAHEAIRPTNLSFTPEIAAKFLDKDELKLYTLIYNRFLACQMSPAISQTQ
                     NVFVKNDRAVFKISGRKILFDGYYKIYGDMDKDKILPNFKIGQNLKVQNLEMNSHFTE
                     PPSRYSEAGLVKKLESLGIGRPSTYAPTISILTSRDYVTIDKKQLIPSDVAFNVTEVL
                     EKNFSDIVDSKFTSNLENTLDEIAEDKADWQETLKEFYYPFMRKIEEGKTKIASQKTV
                     TKLGESCPDCGGELAIRKGRFGEFVACLNFPKCKYSRNLKSESKNESENTAAKAKANG
                     TGITCPSCQKGEIVERFSKRGKFYGCSAYPKCNFISKYKPSEEKCEECGETLVIKELK
                     KGTFLECLKCKIKKEMKD"
BASE COUNT         3042 a         1533 c         1249 g         3221 t
ORIGIN      
        1 aattatcttt ttatgcaact tataagataa tattggattt aatgtaacca tcaaggaaaa
       61 atatgtttga taaaattcat tattatcatt ttaatgctaa ttatgaaaaa tgtttaaact
      121 tgagtgagca atttttaaaa gaaagtccaa aatttgcttt agaatttgct acgctttctt
      181 cttataaact ttctcttttt caaaaagctt tatattatgc tcaagagctt ttttctttaa
      241 atcctacaag ttttaatggt cttatgcttg ctaaaagcta tattgaaaat ttaagacttg
      301 atgaagcctt gaatttatta caaacacttt taactcgcaa agatgattta gaggatgaac
      361 ttaagttaga attggctttt atttataaac tgagtaataa actagaagaa tctgaacaaa
      421 ttttcaaaga attgctttct aaagatatgt ataatcttaa tctatggaaa aattatgcag
      481 aaatttattt taaacatgat tttactaagg cattaaatgc acatgagcac ttgtgtcatt
      541 ttatgcaaga tttgattgat aaactacaaa aaggaatcat tgctgaacaa accaatctta
      601 atttagtcaa actcgaagat aggcttcata gtaaaaccaa agaaaatctt accatttcta
      661 aaatagaaga ttttttaact catcaaattt taccccaaaa agcatacttg ctttttaagc
      721 tttttagaat atctgattct ttagaacttt ttcaatcact acaagaagcc aatcaacacc
      781 atgcacagtt ttggcaaaac tatgctaagg tattagaatt taactcaaac tatcaagaag
      841 cttatcatgc ttataaaaaa tgtcttagct tggattctca tgcaacctat caatttgatt
      901 tggcttatct tttgatgcgt atgggagtgg atgataattt tgaagagggc aagaaatatt
      961 atgaaagcag attattttat gctcataatg aaactttttc tacttatcat tataatgaaa
     1021 gcctaaaagc ttttaataaa tttggcgttg atgcttttaa aaataaagaa gttttagtat
     1081 tttgcgagca aggctttggc gatactataa tgtatgcaag atgcttagaa aaactttgca
     1141 aaatcgcttc aaaggtttta tttgctcctc aaagtgccat gtatgaaatg tttaaaaatc
     1201 aaatcaaatt tttaaatcaa aatgatgata tttttaaaaa tgtaaaggtt ttaaaaaatc
     1261 tacctacaaa ttttgattat gctattccta tttgttcttt gccttttttt attgatatta
     1321 agcttgatga gattttacga ttaaaaacac ctatattgcc acagaaaaaa cgcataatca
     1381 aagaaaaaaa acttggtatt ttttatgcta ctcctaatgc tgaaaattct gatttattaa
     1441 gaaatgtaaa atttgaattt ttatttgatg tattaagaga cttagattat gagatcattt
     1501 cttttcaaat gcaattaaaa gaagaattgc ctaaggtaat agaagataga agcaagctta
     1561 taaaaaattg gaatgatact ctaaattatt tatatgatat tgactgtatg cttagtattg
     1621 atagtgctat agcgcattta agtttagcta tggatattcc tactatagtt cttttacatc
     1681 ctaggtttga ttggcgttgg ggaaaatttg aaaatcctaa aagttatttt tggccaaaag
     1741 caaaatgttt tatcataaaa gaacaagaag aaacaaaaag aaatttgcaa aaactgatta
     1801 aagatatttt aaactaaagc ttagtttaag agctttaggt ggaaaatttg gtttttgata
     1861 acatcagcta gcatttttgg catttggttt ataatatctt gataattttg ctttgcatct
     1921 tgatctttta atgtcaaatt taattctgca ttttttgctg caagaatttt tccattgctt
     1981 gtagaaataa ttttaaaatt aacactagcc acaccctctt tactagttgt gataaaataa
     2041 tttgtaatat ttacataaaa atcttgcaaa tttaccacca caacataatc tgtaaatttg
     2101 gcatacattt tagccttatc tttttcttgt gttaaaaaag gacttacatt tataagtttt
     2161 gcatccttag ggctaaaata tgacaaagtt ttaggacttt gataaatacc atttgcagca
     2221 gaattaaccc aattaagctt taaactttga atcaaatttt tagcaaataa tgtagaaaat
     2281 tccttatcac tcaccctaaa accatctaaa aaataaccaa aatttttcct agaagttaat
     2341 acaatggcaa aatcaatatc tttatctttg gtgatttgcg attttttttc aatcaaggta
     2401 gaactatcaa acaatgcttt ttgttgattt agatttggat ttgcaacatt ttgatttaga
     2461 tctattactt caaaactatc tgcgcttttt tcaattttaa taactttttt ctgagaaaaa
     2521 ttattcgcta aaagattaga acttaaaact aaacttaaaa acaaaatgaa acaatacctc
     2581 atcttcatcc ttataaacta tttaaatata aaaattatac tctttatttt ataaaaaatc
     2641 ttgtaaaaaa ttcctagatg aaacacaaat aaaaggactg gatttataac ttaaagggtt
     2701 atataaaatg tattttttag aaaaatcgcc cataaatcct ccattttgat taatcaaaaa
     2761 atctcctgct acaatatccc aaatattaag cttttcaaat cttttataaa ctcctgccct
     2821 agcctctaaa atagcacaaa atttcaatcc agagcctata ttaatagctt ctaattgatg
     2881 ctcttttgca aagtcttcat cttctttgct aagatgatta acactcaata aggctttata
     2941 tttatttttc tcgtattctt gctggtcaat ttgcaaaggt ttatcgtttt tataaacctt
     3001 ggtttttgca tgagcataga atatatcacc ttttgatgga ttttgtatga gtgataaaac
     3061 agggcgattg tcatgaacca aacttatcat aacgcaaaat tcatcactgc cttttaaaaa
     3121 accacttgtt ccatcaagag gatcgataag ccaaaaagtt tttaattctt cacactcttc
     3181 tttgctgagt aatttttctt ctgatagaat tttaatatcc gtagaaccca aaatatcatt
     3241 tagaatttta ttagaagcaa gatctgctga tgtaagcggg cttttatctt ctttttccca
     3301 agttttgaaa ttttttctct cttctaaaat agctttagaa gcttgattgc tagcatttat
     3361 agcaatttct aaaaatttat caagattaag catgattata aactttctat aagatttttt
     3421 aaaattatac aagaagattt tgtggaattt ttaatttcca caaaaatttt aattatattt
     3481 tactagtttc acccaaataa agttgtcttg gacggactat tttaagactt tcttgctctt
     3541 tttgttctat ccactgagct atccatcctg gggtgcgtcc tataacaaat aaagtagcaa
     3601 acatttcatt tggaatacct aaggctttta aaataagtcc actatgaaaa tcaacattcg
     3661 gatatagccc tctttgaaca aaataatcat cacttaaagc aatctcttct atacgcgttg
     3721 ctactttaat aagattggta tcaataccca actcatcaat aagttgatca cgaagttttt
     3781 taagtacttt tgctctagga tcaaaatttt tatacaccct atgcccaaag cccatcaagc
     3841 ggaaaggatc gtttttatcc ttagctcttt tgatgaattc atctacccta tcaacactac
     3901 ctatttgctc aagcattcta ataacacctt cattagctcc accatgtgca tgaccccaaa
     3961 gcgcaccaat acctgctgct atacaggcat aaggatgagc gtgagttgaa cccacagcac
     4021 gaactgttga agttgaagca ttttgctcat gatctgcatg aagcataaaa actgtatcaa
     4081 gtgcttttac ttctataggt ttaagctcta catgatcgta aggataggtt cttaacatat
     4141 ataagaaatt ttctgtaaaa ccacgatcta aatttggata agccatagga aagccgtgtt
     4201 tatatctata agcagtggcc actatagtag ggattttagc tactattcta gctgccattt
     4261 ccatatattc ttcttttaca ttcatgttta aatgatcagg ataaaaagca ctaagcgatg
     4321 aaacagcacc ttgtaaaact gccataggat gagcattatc agggaaagaa tcaaaaagac
     4381 gatgcatacc ttcatggata aaagaacgct ttttcatttc ataacgaaat gcttcaagac
     4441 gcgtagcatc aggtaattct ttataaagta aaagatgaac cacatctaaa taaagtttgt
     4501 tttcagcaag ccactctata ggatagccac ggtgcattaa aattccgttt tctccatcaa
     4561 tataagtgat ttttgattta caagtagctg tagaagtcaa gccctcatca taagaaaaca
     4621 ttcctgtttg tttataaaaa cttgacatat ctacaacgct tggcccagtt gtaccgtcat
     4681 atataggaaa ttcatagctt tttccatttc tattatcggt tatagtaacg gaatttgaca
     4741 ttttcgctcc ttttattgtt acttttatta attctaacaa aaaagggcga ttatgagttt
     4801 ttttattatt aaatttttaa gattttgttt gcttttttga gtaaaaaagt aactttcatt
     4861 ttttagaatt agaaagaaat ttgatcatac tcataacaat aatagcctca aacaacgctg
     4921 ttaaaataag tgctgaataa agcttctcat caataacctt gcccgaataa cccaaagtag
     4981 ctgttgctat aagcaaggtt aaaggcatag aatgactaag actaaataaa atcatatttt
     5041 taaaaccaat tctttttaaa aaaacacttg cacataaaat tcttaaaccc accataacaa
     5101 acataagtaa aaatgcttgt aaaacgattt tataatctaa aatcatttta agatcaaagg
     5161 ttgaacctat atggataaaa aaaataggga tcaaaaaccc atgtccaaaa gtagaaagct
     5221 tatgctcaag atctttttta tgatcaaaaa aagtagctat aaatgagcct gctataaaag
     5281 aaccaagaac gatttcaagt tttgtaataa ccatagcaac aatgatcagt ataaaaatgg
     5341 ccatacaaaa tcttatatct ttttcatttt tatcttccca tggcataagc acaactttaa
     5401 gctgaggata ccaccaaaaa agcacaccaa gcattttaaa tccaagcaaa caaagcccca
     5461 aaaagatatt aagatataaa atactttgcg ctacatcaat aatacctgtt ccttcgcgca
     5521 aaaaagctcc cgctatagtc aaaagcacaa tagaaatcac ctcagctaaa gtagctacta
     5581 tcatagcaat atttaaccag taacactctt ttccaaaatc cttaaaaagt aaagataaaa
     5641 gccctacact catcacaggt ataatgataa caaatactaa agaaagtcca aaaatccata
     5701 ctataaaaga agataaagca taaagtaaaa aaatataaaa aaaacttttt ttagcaattt
     5761 ctttatccat attaaagaag gctcttaaat ttacctccat acccgctata aacattagat
     5821 aataaaaacc tacatttgcc aaaagtgcaa aattttcact ttttcctatg aaaccaaaat
     5881 gcgctattat cgctcctaaa ataatttcag tagccgaaag aggcaagcgt aaaatttttg
     5941 caatatgcgg agaaaaaagt aagcataaag ctataacgat aagaattttt aaatcaatta
     6001 aagcctgtgt atcaatgaca ctctgatgca aaagtaaatc ccatttcttt taattttatt
     6061 atatcttgac ttggttcttc acctttagtg gttaaataat cccctataac aatagcccca
     6121 gcacctgctt gaaaaatttc atattgtctt tctcgtaata ccacttcacg cccacctgct
     6181 accattacca cgctttgcgg taaagcctct ttggtatcac gaacaatttt taaggcttca
     6241 tcagcgctaa gtcttggaac ttgtagtttt aaattttcat ttgctataaa aaaattaata
     6301 ggcgttgaaa aaggttgtaa ttcttgcaaa gattttctaa aacttagcct atcttcttca
     6361 ctctcaccca taccatagat tccaccacaa caaagcataa gccctgcttc tttagcgttt
     6421 aaattggttt gaaatctact ttcccaagta tgcgtggtgc aaatttgtgg aaaaaattcc
     6481 ttagaagttt caagattgtg attataagaa aaaattcctg cttttttaag ttctttgagt
     6541 tgttccacgc ttgccatgcc attacaggca attaaaagca ggttaggcac ttctttttgc
     6601 acggccttag cagcttcgca aacatactca agcttttcat catcaagccc aagtcctgct
     6661 gtaaccaaac aaaaacccaa ggcttcattt ttctttgcca tttttgcttc taaaacgatt
     6721 tgtgaaagtt ctttacgacg atatttttga atatctgttt ttacatgagc gctttgggtg
     6781 cagtatttac agtcttctga acaatttcca ctcgctatat ttgaaatagc acaaagcatg
     6841 atttgcattc taatccttca tttctttttt gattttacat tttaaacatt ctaagaatgt
     6901 acctttttta agctctttta tcactaaagt ttcgccacac tcttcgcatt tttcttcact
     6961 tggtttgtat ttgcttataa aattgcattt tggataagca ctacagccat aaaatttacc
     7021 acgttttgaa aagcgttcta cgatttcacc tttttgacaa cttggacaag taatgcctgt
     7081 accattagct ttagcttttg cggctgtatt ttcgctttcg tttttgcttt cactttttaa
     7141 atttcttgaa tacttgcatt ttgggaaatt taaacacgct acaaattctc caaaacgccc
     7201 ttttctaata gcaagctctc cgccacaatc aggacaactt tcgcctagtt ttgtgacagt
     7261 tttttgacta gctatttttg tttttccttc ttcgattttt ctcataaaag gatagtaaaa
     7321 ttcttttaaa gtttcttgcc aatctgcctt atcttctgcg atttcatcta gggtattttc
     7381 aaggtttgaa gtaaatttac tatctactat atcactaaaa tttttctcaa gcacttcggt
     7441 tacattaaaa gcaacatcgc taggaatgag ttgtttttta tctattgtta cataatcacg
     7501 gcttgtaagt atagaaatgg ttggtgcata agtagaaggg cgacctatgc ctaaactttc
     7561 aagttttttt acaagtcctg cttctgaata ccttgaaggt ggttcggtaa aatgtgagtt
     7621 catttctaaa ttttgcactt ttaaattttg gcctatttta aaatttggca aaattttatc
     7681 cttatccata tcaccataaa ttttataata tccatcaaaa aggatttttc taccgcttat
     7741 tttaaaaact gctctatcat tttttacaaa tacattttga gtttgagaga tagcaggact
     7801 catctgacag gctaaaaagc gattgtaaat aagtgtgtaa agttttaact catctttgtc
     7861 taaaaattta gccgcaattt ctggagtaaa acttaaattt gtagggcgta tagcttcatg
     7921 agcttcttga gcgcctttag tctttgtagt atatacattt gctttgcttg gaagatagtc
     7981 cttgtcaaaa tttgcttgta tgaattttct tgcattttct actgcttctt tggctaaatt
     8041 taaactatcg gttctcatat aagtaataac ccccatcacg ccttcatggg tatttactcc
     8101 ttcatagagc ttttgagcta tcatcatggt ttttttaggg ttaaaaccaa ggcgattgct
     8161 ggcactttgt tgtaaagttg aagtcataaa aggaggcggc ggagcgattt ttctttcttt
     8221 gctttcaatg tcacttatac tataaacttc atttttacaa gcttctagta taagtttagc
     8281 acgatctttg ttggtaatgg taagtttttc tatcttggct ttatcaaact caactagttc
     8341 tgcatctaaa tctttttgaa aaatcatatc aatactaaag tattctaggg gtacaaaggc
     8401 acgaatttct ttttcacgat cgactatgat ctttaaagcc gcactttgaa cacgcccagc
     8461 actaagtcct ctttgaattt tttgtcctaa taaagggctg agcttatacc ctacaatgcg
     8521 atctaaaaga cgtctggttt gctgagcatt tacagagtgc atgtttaatt ttcttggatt
     8581 ttttaaagca ttttctatag cgcttttagt gatttcatga aaaacaatgc gtggtaaggt
     8641 gttttcatct tttcctatag cttttgcaat atgataggct atagcctctc cttctctatc
     8701 ttcatccgtt gcaagataga cttctttggc atctttggct ttgcttttaa gttctttaac
     8761 taaggcgcta tgatcacttg tgattctata ctcagggata aattcatcat cttctatttt
     8821 aatcccaaag cttgatttag gcaaatctct aatatgtcct ttagaagcga taacttcata
     8881 atcttttccc aaaaaatttc ctatggtttt agcttttgca ggagattcta ctatgattaa
     8941 atttttcttc attttgcacc cttgttaaat aaaaagctga atttagctaa aaatatttaa
     9001 aattctactt ataaaatata ttttaatcaa gctaaaatat tttaa
//
LOCUS       DAPIWB010000060         8571 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.061, whole genome shotgun sequence.
ACCESSION   DAPIWB010000060 DAPIWB010000000
VERSION     DAPIWB010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8571)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8571)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8571
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.061"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            21..446
                     /gene="exbB"
                     /locus_tag="RJ266_001354"
     CDS             21..446
                     /gene="exbB"
                     /locus_tag="RJ266_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HDV7355088.1"
                     /translation="MEFLKDYIDLIIFLILGIMAFIAFWCVVERMLFFRKINFKNYEN
                     QEQFDDAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLAGNIDVKSIIVGLSL
                     ALKATALGLLVAIPALMAYNALLRKVSLLSNAYKANKNA"
     gene            439..828
                     /gene="exbD"
                     /locus_tag="RJ266_001355"
     CDS             439..828
                     /gene="exbD"
                     /locus_tag="RJ266_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HDV7355089.1"
                     /translation="MLKLPKNEGLNIVPFIDIMLVLLAIVLSISTFIAHGKIQISLPS
                     SENATNISNNEKKLLITIDEKNTFYLNDKLADLNEVQNAIFSLDKKTIVELKSDKNAK
                     FESFVKIIDFLKAKEHENFQILTEKNK"
     gene            825..1509
                     /locus_tag="RJ266_001356"
                     /pseudo
     CDS             825..1509
                     /locus_tag="RJ266_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344999.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
     gene            complement(1522..2391)
                     /locus_tag="RJ266_001357"
     CDS             complement(1522..2391)
                     /locus_tag="RJ266_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355090.1"
                     /translation="MKIDTSASLTHSLTNNVDKKELSVLKKEDQDKIPVQDLSSLNSD
                     GVKVVFENKQGELIALNLSDENYSSLQKNFGSYTNYVARNDDSIRLNGEANQFVSNWF
                     ESVKDNFGSLNSNLNNKQQSVKLNFNTNTLQQSMQNLGFKTSDEKISDDANIEEKLNF
                     FIDKDVNKDGKVDDSDVKEPSMREILSDIKEASGSGASAMKTIDPQKINKKDDKENNI
                     KEKEDEDLLQKAQEKGLNALSADEQAKLEASNPEEFEKLKQKSLQELSQNLSKDFQNK
                     IENQEAQIVDKRV"
     gene            complement(2395..2556)
                     /locus_tag="RJ266_001358"
     CDS             complement(2395..2556)
                     /locus_tag="RJ266_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355091.1"
                     /translation="MLKIILVLSILSSFAFANSCVNYEQELKKCNSLKNSHERKMCRL
                     GLFAKCKKG"
     gene            2651..3634
                     /locus_tag="RJ266_001359"
     CDS             2651..3634
                     /locus_tag="RJ266_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MnmA/TRMU family protein"
                     /protein_id="HDV7355092.1"
                     /translation="MKALALFSGGLDSMLAMKLITAQGIEVKALNINIGFGSTSDKSE
                     IMKKRAAMVSADFEMIDVRNSYLQEVLFNPQYGYGKHFNPCIDCHAFMFKTALAMLKE
                     ENASFIITGEVLGQRPMSQRSDAMAKVKKLALDEEDLILRPMCAKNLPLTKPEREGWV
                     DREKLEGIIGRSRKRQLELAAKFGLEDFESPGGGCLLTLDSFAKKIRDFIEFDKDMQV
                     NDAQLLKYGRHLRLPNGAKMIIGRNELENTLLKGLKTPKYEAIEIGDLIGAYSLVDKK
                     ISEKDLELALKIALTYTKHEAGKSYELKFKNQAYTSIAFENKADINQFFIS"
     gene            complement(3720..4808)
                     /gene="aroC"
                     /locus_tag="RJ266_001360"
     CDS             complement(3720..4808)
                     /gene="aroC"
                     /locus_tag="RJ266_001360"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HDV7355093.1"
                     /translation="MNTFGTRLKFTSFGESHGVAVGCIIDGIPAGVKFDEEFLQNELD
                     KRKGGSKFATPRKESDKAQVLSGVFEGYTTGHPIAIVVFNENAHSKDYDNLKDLFRPA
                     HADFTYFYKYGIRDHRGGGRSSARESVARVAGGAVAAMLLREFGICVQSGVFGIGTFV
                     SNLKEKEFDFEFAKKSEIFCLDPKLESDFKNEILNARNSKDSVGAAVFTKVSGMLIGL
                     GEVLYDKLDSKLAHALMGINAVKAVEIGEGINASKMRGSCNNDALKDGKFLSNHSGGI
                     LGGISNGENLILKTYFKPTPSIFSKQESIDKFGNNLEFELKGRHDPCVGVRGSVVASA
                     MVRLVLADCLLLNASANLNNLKNAYGLK"
     gene            complement(4808..5482)
                     /locus_tag="RJ266_001361"
     CDS             complement(4808..5482)
                     /locus_tag="RJ266_001361"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HDV7355094.1"
                     /translation="MKNIEKLEQSLTYEFKDKNLLIHALTHKSFKKSYNNERLEFLGD
                     AVLDLVVGEYLFHKFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFILMSVAEENN
                     GGKEKPSILSDALEAIIGAIHLEAGFEFAKTIALRLIEKNFPQIDAKILIKDYKTKLQ
                     EITQGKIGQTPQYETVRAFGPDHLKQFEIALMLDGKELARAIAGSKKEAQQMAAKIAL
                     EKLGAL"
     gene            complement(5469..5909)
                     /gene="rnhA"
                     /locus_tag="RJ266_001362"
     CDS             complement(5469..5909)
                     /gene="rnhA"
                     /locus_tag="RJ266_001362"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HDV7355095.1"
                     /translation="MKHIEIYTDGSCLNNPGFGGWAYILRYKEYQKEGFGAEANTTNN
                     RMELMAIIESLKALKEPCEISLFTDSNLMVQSINEWLEGWIKKDFKGKKNIDLWKEYI
                     KVAKSHKIKAFWVKAHNGHLENERCDTLAREAALKIARENDEKH"
     gene            complement(5896..6882)
                     /locus_tag="RJ266_001363"
     CDS             complement(5896..6882)
                     /locus_tag="RJ266_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355096.1"
                     /translation="MDFFFVEYRDPLVGLIILTILVFVVAVANYIWKIFANKDEEQKL
                     EKFIKKFEMDNAHKELLRNSSLSFGNLSFLAEIFTKSGEFEKATQIYLIALEKCKDKQ
                     EREFIFLSLAKVYFKAGFLERAKEVLLQALKLRPRNIQALKLLKIVYLKLRSYKENLE
                     LLECLFELNEDVQKERDFIKALELCTFNITDEEKKKKLLEFKIEDNPMLGRLVFEKYH
                     MFLGQNFFDICDLLYRENEAFNLENQDFLEFFYALGKISKHDDTHQFVFKNSNFKMLK
                     ILKDNSFNAGLEFSYRCSECKNVMPLFFYHCPVCYEFNACKIIYEVKNNETH"
     gene            6952..>8571
                     /locus_tag="RJ266_001364"
     CDS             6952..>8571
                     /locus_tag="RJ266_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDV7355097.1"
                     /translation="MITKESIENLSQRLNIVDIIENYIEVKKQGSSFVCICPFHADKN
                     PSMHINPIKGFYHCFACKAGGDAFKFVMDYEKLSFADAVEKVASLSNFTLSYTKEKQE
                     NKKELKSILPSLNAYFKDNLKHHKEVLTYLYQRALNDKDIAKFELGFAGASEDSIRLL
                     QNQKIPLEDAMSVGALKKDENNEFYASFIWRITFPIYDHKDLLVGFGGRTLNPNVPAK
                     YVNSPQNILFDKSRIFYAFNIAKENIAKKKEIIVCEGYMDAIAFHKAGFNNAVAVLGT
                     ALTEHHLPLIRRYDAKVILCFDNDEAGLKAATRSAFLLSTNKIDGKVAILQGGKDPAE
                     LVAKNESTKLHNILDEGIELGEFYIRRLISTHSIISALDKQKALETIQKFTFNLEPLV
                     ANSYTSLVSNLLKVDEKFIVLSQNSKKTIQTPLISQNKYNFPKEKIHIAELELIAFLK
                     QHPDICNDFKQISDSVCFKHKILLDKILEKKGYEDSDIREFESKNIRKNLNYSEFLLG
                     ICKVNLAFLNNVKIKNSTLALKKQLFTLIDKN"
BASE COUNT         3087 a         1450 c         1110 g         2924 t
ORIGIN      
        1 gtatattttt ggagaaaaat atggaatttt taaaagatta catcgattta attatctttt
       61 taattctagg aattatggca tttatagctt tttggtgtgt tgtagaaaga atgctatttt
      121 ttagaaaaat taactttaaa aattatgaga atcaagagca atttgatgat gcgattagtg
      181 aaaatttaac cactatatat atcatctatt ccaatgcccc ttatatagga cttttaggca
      241 ctgtaatagg catcatggtt acattttacg aaatgggctt ggcgggcaat atagatgtca
      301 aatctataat cgtggggctt tctttagctc ttaaagctac agccttagga cttttggttg
      361 ctattcctgc tttaatggct tataatgcct tacttagaaa agtttccctc ttaagcaatg
      421 cttataaggc aaataaaaat gcttaaacta ccaaaaaatg aaggtttaaa tatagtccca
      481 tttatagaca ttatgcttgt tttgcttgct atagtgctta gtatttcaac ctttattgcg
      541 catggaaaaa ttcaaatctc acttccttca agtgaaaatg ctaccaatat aagcaataat
      601 gaaaaaaaac ttcttataac catagacgaa aaaaatactt tttatttaaa tgataaatta
      661 gctgatttaa atgaagttca aaatgctatt ttttcacttg ataaaaaaac catagtagaa
      721 ctaaaaagcg ataaaaatgc taaatttgaa agctttgtaa aaattataga ttttttaaaa
      781 gccaaagaac atgaaaattt tcagattctt actgagaaaa acaaatgaaa actttatttt
      841 taaattataa ataccaagct tcttatataa cttttatagt ctttatacct ttactttttg
      901 tcatttttta ctcaaatgac ttttttaaaa tggaaattaa aaatgaagat tctttttctt
      961 tagcaataaa acaatttacc caaactaatc caacaaatga gaccaaacca acagaatcca
     1021 ttatagaacc tatcaaacca aaacctcagc caaaagttat taaaaaaact cctgaaaaaa
     1081 tgcaaaaaaa agataaaaaa aacacctcca cacccaatac caaataaaac cccaatagca
     1141 ccaactcaag aagttaaaac ttttgcaaaa acaactgata caaatgtcaa acctaagatc
     1201 actcaattaa cacaaggaaa agataatcac cctgtattaa aagaaatcca aaaagctata
     1261 caacaagcac aattttatcc aaggcaagca aaaaaaatgc gtatgcaagg aactgtaaaa
     1321 gtagaatttt tatggaaaga aaacaaaact ttagcagatt taaaaatcat agaaagctca
     1381 ggatatgatt tattagataa aagtgcttta gaaagcataa gaaaagcttc tttaaatttt
     1441 ccatactata acggggattt aagaattaca ctacctatta tatatgattt taaaacccta
     1501 agagggtaaa attataattt gctacactct cttatctaca atttgtgctt cttgattttc
     1561 aattttattt tgaaaatctt tacttaaatt ctgacttaat tcttgcaaag atttttgctt
     1621 cagtttttca aattcttcag gattgctagc ctcaagcttt gcctgctcat cagcacttaa
     1681 agcatttaaa cctttttctt gggctttttg aagcaaatct tcgtcttctt tttctttgat
     1741 attattttcc ttatcatctt ttttattgat tttttgcgga tctatggttt tcatagcact
     1801 agctccacta cctgatgctt ctttaatgtc gcttaaaatt tctctcatgc taggttcttt
     1861 aacatcacta tcatcaactt taccatcttt atttacatct ttatcaataa aaaaatttaa
     1921 tttttcttct atatttgcat catcagatat tttttcatcg cttgttttaa agcctaaatt
     1981 ttgcatactt tgttgaaggg tatttgtatt aaaatttaat tttacacttt gttgtttatt
     2041 atttaaattt gaatttaaag aaccaaaatt atcttttaca ctttcaaacc aatttgaaac
     2101 aaattggttt gcttcgccat taagccttat actatcatca tttctagcaa cataattcgt
     2161 ataagaaccg aaattttttt gtaaactact ataattttca tcgcttaaat ttaaagctat
     2221 aagttcacct tgcttatttt caaaaacaac cttaacacca tcgctattta aactcgaaag
     2281 atcttgcacg ggaattttat cttgatcttc tttttttaat acgctaagct cttttttatc
     2341 aacattatta gttaaagaat gggttaaact agcagaagta tcgattttca ttatttatcc
     2401 ttttttacat tttgcaaata agcctaaacg acacattttt ctctcatgtg aattttttaa
     2461 agaattacac tttttaagtt cttgctcgta gttaacacaa gaatttgcaa aagcaaaaga
     2521 actcaaaatg cttaaaacca aaattatttt taacactttc caatccttat tttaaagatt
     2581 ttttagttaa aattatatct tttataatcg acaaaatctt aaaaaatttt atattcttag
     2641 aaaggaatca atgaaagcat tagctctttt tagcggtggg cttgatagta tgcttgcaat
     2701 gaaactcatc actgcacaag gcatagaagt taaagctcta aatatcaaca taggttttgg
     2761 aagtacaagc gataaaagcg aaatcatgaa aaagcgtgca gcgatggtaa gtgcggattt
     2821 tgaaatgata gatgtaagaa attcctatct tcaagaagtg ctttttaatc cacaatatgg
     2881 ctatggcaaa cattttaatc cttgtataga ttgtcatgct tttatgttta aaactgctct
     2941 tgctatgtta aaagaagaaa atgcaagttt tatcatcaca ggagaagttt taggacaacg
     3001 ccctatgagt caaagaagtg atgcaatggc aaaggttaaa aaacttgctc ttgatgaaga
     3061 agatttaatc ttgcgtccta tgtgcgcaaa aaacctacct ctaaccaaac ctgaaagaga
     3121 aggttgggta gatagagaaa aactcgaagg tattattgga agaagtcgta aaagacaact
     3181 tgaacttgca gctaaatttg gcttagaaga ctttgaaagc ccaggtggag gttgtttgct
     3241 aactcttgat agttttgcta aaaaaattcg agatttcata gaatttgaca aagatatgca
     3301 ggttaatgac gcacaacttt taaaatatgg tcgtcattta agattaccca atggagctaa
     3361 aatgatcata ggtagaaatg aacttgaaaa tactctttta aaaggtttaa aaactcctaa
     3421 atatgaagca atagaaattg gggatttaat cggagcttac tctttggtag ataaaaaaat
     3481 ttcagaaaaa gacttagaac ttgccttaaa aatagccctt acctatacta aacacgaagc
     3541 aggaaaaagc tatgaactta aatttaaaaa tcaagcttat acaagcatag cttttgaaaa
     3601 taaggctgat attaatcaat tttttattag ttaaagtata aagtatttag caaaacaagc
     3661 gatatagtat ttgaatcttt tcaaaatatt gcaatcaagc ccatgaaaat gggctttttt
     3721 tattttaatc cataagcatt ttttaaattg tttaaattcg cactcgcatt caaaagcaaa
     3781 caatcagcca aaactaaacg caccatagca ctagctacaa cacttcctct aacacctaca
     3841 caaggatcat gcctaccttt gagttcaaat tccaaattat tgccaaattt atctatactt
     3901 tcttgcttgg aaaaaataga aggagtaggt ttaaaataag tttttaaaat aagattttct
     3961 ccatttgaaa ttcctcctaa aattcctccg ctatgattgc ttaaaaactt gccatctttt
     4021 aaagcatcat tattacacga tccgcgcatt ttgcttgcat taataccttc gcctatttca
     4081 actgctttaa cagcattaat tcccattaaa gcatgagcta atttagagtc taacttatca
     4141 taaagaactt ctccaagtcc tataagcata ccactaactt ttgtaaaaac agcagcgcct
     4201 acgctatctt ttgaatttct agcatttaaa atttcatttt taaagtcact ttctagtttt
     4261 ggatcaaggc aaaaaatttc acttttctta gcaaattcaa aatcaaattc tttttctttc
     4321 aaatttgata caaaagttcc tattccaaaa acaccacttt gaacacaaat gccaaattca
     4381 cgcaaaagca tcgctgcaac tgcaccacca gccactctag caacactttc cctagcactt
     4441 gatctacccc cacccctatg atctcttatg ccatatttat aaaaataagt aaaatccgca
     4501 tgagcaggac gaaatagatc ttttaaatta tcataatcct tagaatgggc attttcatta
     4561 aaaaccacta tagctatggg atgacccgtt gtatatcctt caaaaacccc gcttaaaacc
     4621 tgagctttat cgctttcttt tcttggtgtt gcaaatttac ttccgccttt gcgtttatca
     4681 agctcatttt gcaaaaattc ttcatcaaat ttaactccag caggtattcc atcaataata
     4741 catccaacag ccacaccatg agactcacca aaacttgtaa atttcaatct cgtaccaaag
     4801 gtattcacta taaagctcct aatttctcaa gtgcaatttt tgctgccatt tgctgtgctt
     4861 cttttttgct tcctgcaata gctcttgcaa gttctttacc atcaagcatt aaagcaattt
     4921 caaattgctt taaatgatca gggccaaaag cacgcactgt ttcatactgc ggagtttgtc
     4981 cgatttttcc ctgtgtaatc tcttgtaatt ttgttttata atcttttata agaatttttg
     5041 catcaatttg agggaaattt ttttctataa gccttaaagc aatagttttt gcaaactcga
     5101 acccagcttc taaatgtata gcacctataa tggcttctaa cgcatctgaa agtatagaag
     5161 gcttttcttt tcctccattg ttttcctcag caacactcat aagaataaaa tcgcccaaat
     5221 ttaaactatt tgcaattttt gcaaaagact tttcattcac taaagctgct ctaagcttag
     5281 ataaatctcc ttcagcatct ttggcgaatt tatgaaaaag gtattcaccc acaactaaat
     5341 caagcacagc atcacctaaa aattccaagc gttcgttgtt gtaagatttt ttaaaacttt
     5401 tatgggttaa agcatgtata agaagatttt tatctttaaa ttcataagtt aaactctgct
     5461 ctagtttttc aatgtttttc atcattttcc cttgcaattt tcaaagcagc ttcacgcgcc
     5521 aatgtatcac acctttcatt ttccaaatgt ccattatgtg cttttaccca aaaagcctta
     5581 atcttatgag attttgccac tttaatatat tccttccata aatctatatt ttttttacct
     5641 ttaaaatcct tttttatcca tccttctagc cattcattaa tactttgaac cattaggtta
     5701 gaatctgtaa aaagcgaaat ttcacaaggc tcttttaaag ccttcaaaga ttcaataatt
     5761 gccattagct ccattctatt gttagtggta ttagcctcag ctccaaaacc ttccttttga
     5821 tactccttat aacgcaaaat ataagcccat ccgccaaaac ctggattatt aagacatgag
     5881 ccatctgtat aaatttcaat gtgtttcatt gtttttcact tcataaataa ttttacaagc
     5941 attaaactca taacaaacag gacagtgata aaaaaacaaa ggcattacat ttttacactc
     6001 agaacaacga tatgaaaatt ctaaccccgc attaaaagaa ttatctttta aaatttttaa
     6061 cattttaaag ttagaatttt taaaaacaaa ctggtgcgta tcatcatgct ttgaaatttt
     6121 acccaaagca taaaagaatt ctaaaaaatc ttgattttct aaattaaacg cttcattttc
     6181 tctataaagc aaatcacaaa tatcaaaaaa attttgccct aaaaacatat gatatttttc
     6241 aaaaactaaa cgccccaaca taggattatc ttctatttta aattctaaaa gttttttctt
     6301 tttttcttca tcagtaatat taaaagtaca aagttctaaa gctttgataa aatcacgctc
     6361 tttttgtaca tcttcattaa gctcaaaaag acattctaaa agttctaaat tttctttata
     6421 agaacgaagt tttaaataaa caatttttaa aagttttaag gcttgtatat ttcttggacg
     6481 cagttttaaa gcttgtaata aaacttcttt tgcacgctct aaaaatcctg ctttaaaata
     6541 aacttttgct aaagaaagga aaataaattc tctttcttgt ttatctttac atttttcaag
     6601 agcaatcaaa taaatttgag ttgctttttc aaattccccg cttttagtaa aaatttcagc
     6661 caaaaaactt aaatttccaa aactcaagct actatttctt aataactctt tatgagcgtt
     6721 atccatttca aattttttta taaatttttc aagcttttgt tcttcatctt tgttagcaaa
     6781 tattttccaa atataatttg caacagctac aacaaatact aaaatggtta aaattataag
     6841 ccctactaaa gggtctctgt attctacaaa gaaaaaatcc atagtctcgc tctaaaaatt
     6901 ttatgccaaa ttatagccaa atctttgtat aattttaaca aggtttgtaa aatgataact
     6961 aaagaaagta tagaaaattt atcccaaaga cttaatattg ttgatattat agaaaattat
     7021 attgaagtaa aaaaacaagg ctctagtttt gtatgtatct gtccttttca tgcagataaa
     7081 aacccgtcta tgcatatcaa tcctatcaaa ggtttttatc attgttttgc ctgcaaggct
     7141 ggtggagatg cttttaaatt tgtaatggat tatgaaaaat taagttttgc tgatgcagtt
     7201 gaaaaagttg caagccttag taattttact ttgagttata caaaagaaaa acaagaaaat
     7261 aaaaaagagc taaagtctat actaccaagc ttaaatgcgt attttaaaga taatctcaaa
     7321 caccacaaag aagttttaac ctatctttac cagagagctt taaatgacaa agatatagcc
     7381 aaattcgaat taggttttgc aggagcaagt gaagatagta taagattatt gcaaaatcaa
     7441 aaaattcctt tagaagatgc tatgagtgtt ggagctttaa aaaaagatga aaataatgaa
     7501 ttttacgcaa gttttatatg gcgtatcacc tttccaatct acgatcataa agacttattg
     7561 gtagggtttg gagggcgcac tttaaatccc aatgtaccgg caaagtatgt aaattcaccc
     7621 caaaatatac tttttgataa aagtagaatt ttttatgctt ttaacatcgc taaagaaaat
     7681 atagccaaaa aaaaagaaat aatagtatgt gaaggctaca tggatgcaat agcttttcac
     7741 aaagcagggt ttaacaatgc tgtagcagtt cttggaacag cattaaccga acatcatcta
     7801 cccttaatcc gccgttatga tgcaaaagtg attttatgtt ttgacaatga tgaagcagga
     7861 ttaaaagctg cgacacgatc tgcattttta ttaagcacaa acaaaataga cggtaaagtg
     7921 gcaattttgc aaggcggaaa agatcctgct gagctcgtag caaaaaatga aagcacaaaa
     7981 ctccataata tactcgatga aggaatagag cttggtgaat tttatatcag acgcttaata
     8041 tccactcatt ccataatttc tgctcttgat aaacaaaaag ctttagaaac tatacaaaaa
     8101 ttcaccttta atcttgaacc tttagtggca aattcttaca ctagtctagt ttcaaattta
     8161 ttaaaagtgg atgaaaaatt tattgtctta tcacaaaatt caaaaaaaac catacaaacc
     8221 cctttaattt ctcaaaataa atacaatttt cctaaagaaa aaattcacat tgcagaatta
     8281 gaacttatag cttttttaaa acagcatcca gatatatgta acgattttaa gcaaattagt
     8341 gatagtgttt gttttaaaca taagatttta ttggataaaa ttttagaaaa aaaaggttat
     8401 gaagatagtg atattagaga atttgaaagt aaaaatattc gaaaaaattt aaactatagc
     8461 gaattcttgt taggtatttg caaggttaat ttagcttttt taaacaatgt aaaaattaaa
     8521 aattctacac tcgcattaaa aaaacaactt tttacgctta ttgataaaaa t
//
LOCUS       DAPIWB010000061         8526 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.062, whole genome shotgun sequence.
ACCESSION   DAPIWB010000061 DAPIWB010000000
VERSION     DAPIWB010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8526)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8526)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8526
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.062"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            128..1203
                     /locus_tag="RJ266_001365"
                     /pseudo
     CDS             128..1203
                     /locus_tag="RJ266_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344920.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
     gene            complement(1205..1654)
                     /locus_tag="RJ266_001366"
     CDS             complement(1205..1654)
                     /locus_tag="RJ266_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HDV7355098.1"
                     /translation="MLELIGELSLQNYMGEWLEIARKPAFFQKSCLNSKAKYELKYKN
                     GIPYVEIENFCSKKNEISSIKGKAKIVSNRQLAVRFNIFMNLFNKVNYEIIFVDSEYK
                     VAIVGSPDKKYLWILARNIIDEKNIKELLNIAKQRGFDISDVVFDKY"
     gene            complement(1642..1989)
                     /locus_tag="RJ266_001367"
     CDS             complement(1642..1989)
                     /locus_tag="RJ266_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV7355099.1"
                     /translation="MTKENSPCNFEECGFNYTLALINGKYKMSILYCLFRYEIVRYNE
                     LKRFLSSISFKTLTNTLRELENDGLIIRKEYAQIPPKVEYSLSKRGQSLIPILQAMSK
                     WGKKDKKGKKCLN"
     gene            2089..2667
                     /locus_tag="RJ266_001368"
     CDS             2089..2667
                     /locus_tag="RJ266_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDV7355100.1"
                     /translation="MKNILLLNGAKEFGNSKGQLNLTLHNHALEILKTLGYEVDQTHI
                     DQGYDPKEEIQKFIKADAVIYQMPAWWMGEPWIVKKYIDEVFGLGAGVLFKNDGRTHE
                     NPSKNYGKGGLDHGKKYMFSLTWNAPLEAFNDKNEFFEGKGVDMVYWHLHKAHEFIGM
                     KALPTFMCNDVVKNPQVEKYLNEYELHLKKIF"
     gene            2700..3596
                     /locus_tag="RJ266_001369"
     CDS             2700..3596
                     /locus_tag="RJ266_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDV7355101.1"
                     /translation="MTRTKYLYILLVIAMFLWGSSWPTSKILANYTDTSIITFWRFFF
                     VVLGSFFVLNFLKIPLKIEKNALKWVLIAGVLNGLYAFVFFIAIKHGLAGKGGVLVTT
                     MIPIFSYLIFMIAIFFQKNKKSTHKITKSEILGLFLGLLSGFCLLNLGSLEDLFGKFN
                     ILFLTCSFIWALIAVFNHKAKGAHPLAINFYINLISVLMFSWVLFDVKSYEIFHFEFK
                     FWISMFVVAFLSTIIGTSIYYYGIHILGSVKANSFVLITPASALICSYFILDEVPNAL
                     TLLGCALAIGAIYFINIYGKKA"
     gene            complement(3593..4558)
                     /locus_tag="RJ266_001370"
     CDS             complement(3593..4558)
                     /locus_tag="RJ266_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HDV7355102.1"
                     /translation="MSIKIIEASINSSLQDFGRKKFAKFGIARSGAMDEDALRMANIL
                     LGNKQDEAGIELCLKGGKYEFLDENYFVLSGAEFEAKLDNQKIKTCKVYQANKGDILE
                     LDLAKIGFRGYLCVAGGFEVKSFLNSKSSDAKMGAGVFEGRALQKDDILNTHNTFIPF
                     NLEARECENPLFKSPKEPIIRVILGTNEDAFTQKGIETFLNTTYKVGLKSDRMAIYAE
                     SSESIEHKNSADIISDPAVFGSIQVPKSGIPIVLMAGRQSTGGYTKIATVIENDLSLL
                     AQAKLGSSFKFQSISMQEALELYKQREMKFKAMNQKINLDFENLI"
     gene            complement(4539..5279)
                     /gene="pxpB"
                     /locus_tag="RJ266_001371"
     CDS             complement(4539..5279)
                     /gene="pxpB"
                     /locus_tag="RJ266_001371"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HDV7355103.1"
                     /translation="MFSVHFSGSKALLLRFEQEISPQINAYVLSTEQRIQKALKEGEI
                     YGIDELVSTYASLLIYFNPCVLSLNSLLDFLEKIKKDIKLTEQNSSLCIEVPLCYDEE
                     FGLDLEFVCKHNQISKEELISLHTKPYYLVFMLGFMAGFPYLGGLDERLFTPRLSSPR
                     AKIEAGSVGIADKQTGVYPISSPGGWQIIARTPLEFFDKEDEKNPTLLKAGMFLKFKA
                     ISKDEFFDIQEQVAKKVYQKEIYEYKNH"
     gene            complement(5289..6056)
                     /locus_tag="RJ266_001372"
     CDS             complement(5289..6056)
                     /locus_tag="RJ266_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamB/YcsF family protein"
                     /protein_id="HDV7355104.1"
                     /translation="MFKVDLNSDLGESFGAYKMGMDEEILKFVSSVNVACGFHAGDPC
                     VMDETLNLAKQNGVCIGAHPSYPDLLGFGRRNMQISFEEAKNYALYQLGALFGFAKAK
                     GMEIQHFKAHGALYNMAAIDENLALALCEAVASFDENIIFLGLSNSAMNEAAKKKGLR
                     YANEVFADRAYNDDGTLVSRKLEGALIHDENLAIKRVIKMIKESKVTSINGKEIDLKA
                     DSICVHGDNAKALEFVKKIKENLKKEQIQICALENFI"
     gene            complement(6198..7007)
                     /locus_tag="RJ266_001373"
     CDS             complement(6198..7007)
                     /locus_tag="RJ266_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDV7355105.1"
                     /translation="MKKIISLALALALSASAAELKMATTTSTDNTGLLDALKPLYEKE
                     SGNTLKWVAVGTGAALKMGEDCNADVLFVHSPKAEKEFMKKGFGVDRTPVMYNDFIII
                     ADKSLASKFKGKNLKESLELIKNEKLTFISRGDKSGTDNKEKSLWKNLGGVPEKQSWY
                     QQSGQGMLASIKITEEKKGVILTDRGTYIKYEANEKGKPNLVIVNEGDDSLKNFYSVI
                     ATNPKHCKNVNYTEASKFIKWVTSDKTLNFIADFKLLNKPLFVIDAKTRKD"
     gene            7086..7772
                     /locus_tag="RJ266_001374"
     CDS             7086..7772
                     /locus_tag="RJ266_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002874119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7355106.1"
                     /translation="MDYIFDGFKQALFLLFNADESVISAIKTTLLSSSISIVLALLIG
                     FPLGFILGFFDFKFKCFIKLIIDTSLSFPTVAVGLILYALISSRGPLGEFGLLFTIKA
                     LILGQFILALPIVIALFSNLIENMNKKHFLLIKSFHLSPLKLVLTMIYELRFALISVV
                     ALAYGRIVAEVGVAMIVGGNIKYDTRTITTAISLETNKGEFASGIALALVLILIAFCL
                     NFITHKLKRT"
     gene            7774..>8526
                     /locus_tag="RJ266_001375"
     CDS             7774..>8526
                     /locus_tag="RJ266_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7355107.1"
                     /translation="MIEISNLFFNYQNKEVLKIKNLKLDTSKISILMGANGSGKSTFL
                     RILKFLEGDFSKNISYFGNFKPNNKQKREIYLLFPEPILLNRSVRANFLFTLKTYGIK
                     EDIEERIKESLMFLNLDESLLSKHPNELSSGQSQKIAFAIALSVRAKYYLLDEPSAFL
                     DKNTTLLFKKAILKMHENFNTGFLIASHDKHFLDSLAQKKLYLHSGEILEFENTNVFE
                     LENQGVKFCNFIDFSNCKKYKDFKKPPSKIAID"
BASE COUNT         2756 a         1358 c         1306 g         3106 t
ORIGIN      
        1 tacgttaaaa aatcaaaaaa ttttaacaca tcaagtattt attctaattt ttaaaaaatt
       61 attttctctc ttgacttata gctactctaa tgttttataa ttataaaaaa tcaaaaaagg
      121 agcaaaaatg caatacaaaa ttttagaaaa caatcgcatc gcaagtaaag gctatgcaat
      181 gcttagcaag gatgcgaatt tacacccttt gaatttagcc gccacgctat tggcgataat
      241 gatattttga ttaaaatcct atatgcaggc atttgtcata gtgatattca caccgcaaga
      301 agcgagtggg gagaagctac ttatccttgt gtgcctgggc atgagatagc aggagaagtt
      361 attgctatgg gtaaaaatgt gggtaaattt aaagtaggag attacgcagg ggttggttgt
      421 atggtaaatt catgcggtga gtgcgatgct tgcaaacgct cacaagagca gttttgcgaa
      481 aatggcaaaa ccatctttac ttacaatagt tgtgatgtat ttcacggcaa tgaaaacact
      541 tatgggggct actcaaacaa catagttgta agtgaaaaat ttgccatttg tgtgtcaaaa
      601 aatgcaccga tggataaggt tgcgcctttg ctttgtgcgg gcattaccac ttactcgcct
      661 ttaagatttt ctaagataaa agaaggctca agcgttgcta tagcaggatt tggcggactt
      721 ggtatgatgg cggttaaata tgctgtgaaa atgggtgcaa aggttagcgt ttttgctaga
      781 aatgaaaaca aaaaagccga tgctttggct atgggtgtaa gctcatttta cacaagctgc
      841 gataaaaacg ctgtaaaaga acgttttgat ttaatcatct caaccattcc aacgccttat
      901 aatcctgcta tttatttgga tttgcttaaa tttggcggtg aaatggcgat agtgggtttg
      961 ccacctcacg aagttgctcc aagtatcagc gtgataacct ttgtacataa ggcaggtaaa
     1021 aaggtttatg gctcgttaat tggtggtatt gctgaaactc aagaaatgct tgatttttct
     1081 ttaaaacacg gaatttatcc agaaaccgag cttattaccc cacaagaaat cgataaagct
     1141 tatgaaaatc taacctcagg aaaggctaaa tttcgctatg tcattgatat gacaaaagaa
     1201 taatttaata cttatcaaaa accacatcgc taatgtcaaa tcccctttgc ttagcgatgt
     1261 ttaaaagctc ttttatattt ttttcatcta ttatatttct tgctaaaatc caaagatatt
     1321 ttttatcagg actacccaca atggcaactt tatactcgct atcaacaaaa atgatttcat
     1381 aatttacttt attaaaaagg ttcataaaga tgttaaatct cactgctaat tgcctatttg
     1441 aaacgatttt tgccttaccc tttatacttg aaatttcatt ttttttactg caaaaattct
     1501 caatttctac ataaggaatg ccatttttgt atttaagctc gtattttgcc tttgaattta
     1561 ggcaagattt ttgaaaaaag gccggttttc tagctatttc aagccattct cccatataat
     1621 tttgcaaaga aagttcgcca attaattcaa gcattttttc ccttttttgt ctttcttgcc
     1681 ccatttgctc atagcttgta aaatgggaat taaactttgt ccacgtttgg ataagctata
     1741 ttctaccttg ggtggaattt gagcgtattc ttttctgata attaaaccat cgttttctag
     1801 ttctcttaag gtattggtta aagttttaaa agatatggag cttaaaaagc gtttgagttc
     1861 attataacgc acgatttcat agcgaaataa gcagtataaa atactcattt tatattttcc
     1921 attaattaat gctagagtat agttaaatcc acattcttcg aaattgcacg gagaattctc
     1981 tttagtcatt taacattcct ttagtatagt atattacttt attttctgta ttgaaaatga
     2041 tattatgcta agttataatt gtatcataaa atttaaaaaa ggataaaaat gaaaaatata
     2101 ctcttactta atggcgctaa agaatttgga aattcaaaag gacaacttaa tttgacattg
     2161 cataatcatg ctttagaaat tttaaaaaca ctaggatacg aggtagatca aactcacata
     2221 gatcaaggat atgatcctaa agaagagata caaaaattta taaaagctga tgctgtgatc
     2281 tatcaaatgc cagcttggtg gatgggggag ccttggatag ttaaaaaata tatcgatgaa
     2341 gtgtttggtt tgggtgctgg agtgcttttt aaaaatgatg gaagaactca tgaaaatcct
     2401 agtaaaaact acggaaaagg tggtttagat catggtaaaa aatacatgtt ttctctcact
     2461 tggaatgcac ctcttgaagc ctttaatgat aaaaatgaat tttttgaagg aaagggtgta
     2521 gatatggtgt attggcattt gcataaggct catgaattta taggtatgaa agctttacca
     2581 acttttatgt gtaatgatgt ggtaaaaaat cctcaagtgg aaaaatatct aaacgagtat
     2641 gaactacact tgaaaaaaat tttttaaaaa atttgactta aaaatttcaa ggtgtaacat
     2701 tgactcgaac aaagtatttg tatatcttgc ttgttattgc tatgttttta tggggctcat
     2761 cttggccaac atctaagatt ttagcaaatt atacggatac ttctattatt accttttggc
     2821 gttttttctt tgttgtattg ggttcatttt ttgttttaaa cttcttaaaa attcctctta
     2881 aaatcgaaaa aaatgcctta aaatgggtat tgatagcagg agttttaaat gggctttatg
     2941 cctttgtatt ttttatcgct ataaagcacg gcttggcagg caaaggagga gttttagtaa
     3001 ccactatgat tcctattttt tcttatttga tatttatgat agcgatattt tttcaaaaaa
     3061 acaaaaaatc aactcacaag atcacaaaga gtgaaattct aggcttattt ttaggtttat
     3121 tatctggatt ttgtttgcta aatttaggga gtttagaaga tttatttggt aaatttaata
     3181 ttttattttt aacttgttct tttatttggg ctttgatagc agtgtttaat cataaagcca
     3241 aaggagctca ccctttggcg attaactttt atattaatct catttctgtt ttaatgtttt
     3301 cttgggtatt gtttgatgta aaaagttatg aaatttttca ttttgaattt aaattttgga
     3361 tcagtatgtt tgtcgtggct tttttatcaa ctattatagg aactagtatt tattattatg
     3421 ggattcacat tttaggaagc gttaaggcaa attcttttgt tttaatcact cctgctagtg
     3481 ctttaatttg cagttatttt atactagacg aggtgccaaa tgcacttacc ttgttaggtt
     3541 gtgccttggc tataggtgct atatatttta tcaatattta tggtaaaaaa gcttagatta
     3601 aattttcaaa atcaagattg attttttgat tcatagcttt aaatttcatt tctctttgtt
     3661 tataaagttc taaggcttct tgcatgctaa tgctttgaaa tttaaagcta gaacctaact
     3721 tagcttgtgc gagtaagctt agatcatttt ctataaccgt ggctattttt gtatagcctc
     3781 ctgtgctttg tcttcctgcc attaaaacga taggaatgcc actttttggc acttgtatac
     3841 ttccaaaaac cgcaggatct gagatgatat ctgctgagtt tttatgctct atactttcac
     3901 tagattctgc ataaattgcc attctatcgc tttttaaacc tactttataa gtagtattta
     3961 aaaaggtttc tatgcctttt tgggtaaaag catcttcatt tgttcctaaa ataacgcgta
     4021 taataggctc tttagggctt ttaaaaagag ggttttcaca ttctctagct tctaaattaa
     4081 aaggtataaa agtattatga gtatttaaaa tatcatcttt ttgcaaagct cttccttcaa
     4141 aaactccagc tcccatttta gcatcactgg atttagagtt taaaaaactt tttacttcaa
     4201 agccacccgc tacgcataaa tacccacgaa aacctatttt tgctaaatca agttctaaaa
     4261 tatcgccttt atttgcttga tatactttgc aagttttgat tttttgatta tcaagctttg
     4321 cctcaaattc agctccactt aaaacaaaat aattctcatc taaaaattcg tattttccac
     4381 cctttaaaca aagctcaatt cctgcttcat cttgtttgtt tccaagcaag atatttgcca
     4441 ttcttaaagc atcttcatcc atagctccac ttcttgctat gccaaattta gcaaattttt
     4501 ttctaccaaa gtcttgcaaa cttgaattta tagacgcttc aatgattttt atactcataa
     4561 atttcctttt gatagacttt tttagcaact tgctcttgga tatcgaaaaa ttcatctttt
     4621 gaaatggctt taaattttaa aaacataccc gcttttaaaa gagtgggatt tttttcatct
     4681 tctttatcaa aaaattccaa aggtgttcta gcaatgattt gccaaccccc tgggcttgat
     4741 ataggataaa ctcctgtttg cttatcagct atgcctacac ttccagcttc tatttttgct
     4801 ctagggcttg aaaggcgtgg ggtaaaaagt ctttcatcta aacctccaag ataaggaaaa
     4861 cctgccataa aacctagcat aaaaacaaga taataaggtt tagtgtgaag agatataagc
     4921 tcttcttttg aaatttgatt gtgtttgcac acaaattcta aatccagccc aaattcttca
     4981 tcataacaaa gtggaacttc tatacaaaga cttgagtttt gctccgtaag tttgatatcc
     5041 tttttaattt tttccaaaaa atcaagcaaa gaatttaaag aaagcacgca aggattaaag
     5101 tatatcaaca aacttgcata agtacttacc aactcatcaa taccataaat ttcaccttct
     5161 tttagggctt tttgtatcct ttgttctgtg cttaaaacat aggcattgat ttgaggtgaa
     5221 atttcttgct caaaacgcaa aagcaaagct ttacttccac taaaatgcac actaaacatt
     5281 gctaaaactt atataaaatt ttccaaagca caaatttgaa tttgctcttt ttttaaattt
     5341 tctttgattt ttttaacaaa ttctaaagct tttgcattat ccccatgaac acaaatacta
     5401 tcggctttta aatcaatttc tttgccattt atgcttgtaa ctttgctttc ttttatcatt
     5461 tttatcacgc gtttgatagc taaattttca tcgtgtatta acgccccttc taattttctt
     5521 gaaactaaag tgccatcatc attataggca cgatctgcaa aaacttcatt agcatatctt
     5581 aaaccctttt tcttagctgc ttcattcata gcagaattac taagccctag aaaaataata
     5641 ttttcatcga aactcgccac tgcctcacaa agtgctaagg ctaaattttc atcaatggct
     5701 gccatattat aaagcgcccc atgggcttta aaatgctgta tttccatacc ttttgcctta
     5761 gcaaagccaa ataaagctcc tagttgatac aaggcatagt ttttagcctc ttcaaagctt
     5821 atttgcatat tgcgtcttcc aaaacccaaa agatcaggat aagatggatg tgctcctatg
     5881 caaacaccat tttgcttggc taaatttaag gtttcatcca tcacacaagg atcacccgca
     5941 tgaaagccac aagcgacatt tactgaactt acaaatttta aaatttcttc atccattccc
     6001 attttatagg cgccaaaact ttcccctaaa tcactattta aatccacttt gaacattatt
     6061 tgaccttgta tatttaatta ttgattttat tatatctaaa gaagaatttt aaataagcta
     6121 aaagttttga aaaataaata aaaaagttac aataagtaaa aaatgatatt ttaagcaggt
     6181 taaaacctgc ttaattttta gtcttttctt gtttttgcat caattacaaa taaaggttta
     6241 ttaagaagtt taaaatcagc aatgaaattt aaagtcttat cacttgttac ccatttgata
     6301 aatttactag cttctgtata atttacattt ttacaatgct taggatttgt cgctataaca
     6361 gaataaaaat ttttaagact atcatcgcct tcatttacaa tgactaagtt tggtttgcct
     6421 ttttcattgg cttcatattt gatataagta ccacgatcgg ttaaaatcac accttttttt
     6481 tcttcagtga ttttaatgct tgctaacata ccttgtccgc tttgttgata ccagctttgc
     6541 ttttcaggaa caccaccaag atttttccaa aggctttttt ctttattgtc agtgcctgat
     6601 ttatcgcctc ttgagatgaa agtaagcttt tcatttttga taagctctaa gctttctttt
     6661 aaatttttac ctttaaattt agaagctaaa gatttatctg cgatgatgat aaaatcatta
     6721 tacatcacag gagttctatc tacaccaaag ccttttttca taaattcttt ttcagccttt
     6781 ggagaatgca caaaaagcac atcagcattg caatcttcac ccatttttaa agccgcacct
     6841 gttcctacgg caacccattt taaggtattg ccactttctt tttcataaag aggttttaga
     6901 gcatctaaaa gtcctgtatt gtcagtgctt gttgtagttg ccattttaag ttctgctgca
     6961 cttgcactta aagctaaagc aagggctaaa gaaatgattt ttttcatttt ttttccttat
     7021 aaatttacat aaaaaaatat tttagcataa ttatgctaaa attacttatt ttaaaaagga
     7081 tatttttgga ttatattttt gatggtttta aacaggcttt atttttactt ttcaatgctg
     7141 atgaaagcgt aatttcagct ataaaaacta cacttttaag ctcaagtatt tctatagttt
     7201 tagctttgct tataggtttt cctttgggat ttatcttagg tttttttgat tttaaattca
     7261 aatgctttat aaaacttatc atagatacta gcctttcttt tccaacagtt gcagtaggac
     7321 ttatacttta tgcactgatt tcaagtcgag gacctttggg agaatttgga ctgcttttta
     7381 ctataaaggc tttaatttta gggcagttta tcttagcgct tcctatagtg atcgcacttt
     7441 tttcaaattt gatagaaaat atgaataaaa aacatttttt acttataaaa tcttttcacc
     7501 taagtccttt aaaacttgtt ttaacgatga tttatgaatt acgctttgct ttgattagcg
     7561 tcgttgcact agcttatgga cgcattgtag cagaagtagg agtagcgatg atagtaggtg
     7621 gaaatatcaa atacgatact agaaccataa ccacagctat ttctcttgaa acaaacaaag
     7681 gcgaatttgc tagcggtata gctttggctt tggttttaat tctcattgcc ttttgtttaa
     7741 atttcatcac gcacaaactc aaaagaacat aaaatgatag aaatttctaa tctttttttc
     7801 aactatcaaa acaaagaagt tttaaaaatc aaaaatttaa aacttgatac aagtaaaatt
     7861 agcatcttaa tgggagcgaa tggaagtgga aaatctacat ttttaagaat attaaaattt
     7921 ttagaaggag atttttcaaa aaatatttct tattttggaa attttaaacc taataataaa
     7981 caaaagcgtg aaatttattt gctttttcca gagcctattt tgttaaatcg tagtgtaagg
     8041 gcaaattttt tatttacctt aaaaacttat gggattaaag aagatattga agaacgcata
     8101 aaagaaagtt tgatgttttt aaatttagat gaaagtcttt taagtaaaca tcctaatgaa
     8161 ctttcatcag gacaaagtca aaaaatagct tttgctatag ctttaagcgt aagagcgaag
     8221 tattatttac ttgatgaacc aagtgctttt ttggataaaa atactacact tttatttaaa
     8281 aaagctattc ttaaaatgca tgaaaatttc aatacaggtt ttttaatcgc aagtcatgat
     8341 aaacattttt tagattcttt ggcgcaaaaa aaactttatt tgcacagtgg agaaatttta
     8401 gaatttgaaa atactaatgt ttttgaacta gaaaatcaag gtgtgaaatt ttgtaatttt
     8461 atagatttta gtaattgtaa aaaatataaa gattttaaaa aacctccaag caaaattgct
     8521 attgat
//
LOCUS       DAPIWB010000062         8407 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.063, whole genome shotgun sequence.
ACCESSION   DAPIWB010000062 DAPIWB010000000
VERSION     DAPIWB010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8407)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8407)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8407
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.063"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(280..1032)
                     /locus_tag="RJ266_001376"
                     /pseudo
     CDS             complement(280..1032)
                     /locus_tag="RJ266_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344804.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
     gene            complement(1045..1719)
                     /locus_tag="RJ266_001377"
     CDS             complement(1045..1719)
                     /locus_tag="RJ266_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HDV7355108.1"
                     /translation="MQAIILCGGLGTRLKSVIKDIPKPMAPINNKPFLEFIFEYLKKQ
                     GIKEIILAVSYKYEVIKEYFKDEFLGIKIKYSIEKEPLGTGGAIKEALKFIKNEAYVL
                     NGDTFFDIDLSKLKLNRSKICLALKQMNDFDRYGMINIDKHGLVISFEEKVFKKQGLI
                     NGGIYLLTKDIFNDFALQEKFSFEEFLQENYKKLKARACIFDDYFIDIGVPEDYYNFT
                     SNQSYF"
     gene            complement(1707..2312)
                     /gene="gmhA2"
                     /locus_tag="RJ266_001378"
     CDS             complement(1707..2312)
                     /gene="gmhA2"
                     /locus_tag="RJ266_001378"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HDV7355109.1"
                     /translation="MEVINLYIKEHFQESILVKEQILKDENLITLIKNASLEVIKAYK
                     NGNKTLLAGNGGSAADAQHIAGEFVSRFYFDRPGIASIALTTDTSILTAIGNDYGYEN
                     LFARQVQAQGVKGDVFIGISTSGNSKNILKALELCKQKEIISIGLSGVSGGAMNELCD
                     YCIKVPSTCTPRIQEAHILIGHIICAIVEEELFGKGFFCKQ"
     gene            complement(2318..3409)
                     /locus_tag="RJ266_001379"
     CDS             complement(2318..3409)
                     /locus_tag="RJ266_001379"
                     /inference="COORDINATES: protein
                     motif:HMM:NF020073.1,HMM:NF024880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDV7355110.1"
                     /translation="MLEGGGSIKLSQCDKCGYIENLAFNKNEMQKMYSSAGYYQTKNF
                     TSRLNKHIIEIKNTIMKYAKNTDIFLEIAPGRGDLALALSREVSFIYTIDPSKSSSNY
                     DKTKNMKHIQGFFSKKFLDEQVDNKINFIVFRHLLEHIDNPKIFLKDIVEYLDENGMI
                     YLEVPNAHDILRYKRFIDIYHDHCGYYQEATLVNIMNHLGCKLIEKVKYFDEQHIGLF
                     FLKKQIRKYQEPFVFYNNIKDSFDIEIKYINDVLSRYKNIGIYGAGVQGHTLINHLNY
                     KNLLKIVCAFEINRDKVGKYMVNSNILINYPDRKSLEKLDCLIMAIPSHEVYAYENEI
                     LDFIRKKYFQGDVIRTAKGIECFKFSKGK"
     gene            complement(3533..4552)
                     /gene="hddA"
                     /locus_tag="RJ266_001380"
     CDS             complement(3533..4552)
                     /gene="hddA"
                     /locus_tag="RJ266_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-D-manno-heptose 7-phosphate kinase"
                     /protein_id="HDV7355111.1"
                     /translation="MKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCT
                     LIEREDGKIIFDSPDTNSYSEHESKEFLKNDGKLDIFKSIYNRIVKDFTKKPLSFSLH
                     TYSDVPSGSGLGGSSTLVVGVIKAFVEWLNLPLGEYEIARLAYEIEREDLGIVGGAQD
                     QYAATFGGFNFMEFYDNKRVIVNPLRIKNWIASELEARTVLYFTNITREAKDIEEHKK
                     GKLGDEKSLEAMHAIKQDAIKMKEALFKADFDTLAQILGKSWQSKKIISEIVSNDELE
                     RIYKLAIDNGAYSGKTSGAGAGGFMFFFVDPTKKYNLIKALRKEQGYVQDFSFTKEGV
                     KSWRI"
     gene            complement(4628..5566)
                     /locus_tag="RJ266_001381"
     CDS             complement(4628..5566)
                     /locus_tag="RJ266_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase"
                     /protein_id="HDV7355112.1"
                     /translation="MSKKVLITGGAGYIGSVLTPILLEKGYEVCVIDNLMFDQISLLS
                     CSHNKNFTFINGDAMDENLIRQEVAKADIIIPLAALVGAPLCKRNPKLAKMINYEAVK
                     MISDFASSSQIFIYPNTNSGYGIGEKDAMCTEESPLRPISEYGIDKVHAEQYLLDKGN
                     CVTFRLATVFGISPRMRLDLLVNDFTYRAYKDKFIVLFEEHFRRNYIHVRDVVKGFIH
                     GIENYNKMKGQAYNMGLSSANLTKRQLAETIKKYIPDFYIHSASIGEDPDKRDYLVSN
                     AKLEATGWKPDNTLEDGIEELLRAFKMMKVNCFANV"
     gene            complement(5590..6624)
                     /locus_tag="RJ266_001382"
     CDS             complement(5590..6624)
                     /locus_tag="RJ266_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002830388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HDV7355113.1"
                     /translation="MKKTALITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIY
                     HLSDRINKKDRISIFYADLNDYSSLQKLFESQRPDAIFHLAAQSYPKTSFDIPIETLQ
                     TNIIGTANILENIRILKAKDGYDPVVHICSSSEVYGKAKAGVKLNEETAFHGASPYSI
                     SKIGTDYLGRFYGEAYNIRTFVTRMGTHSGPRRSDVFFESTVAKQIALIEAGYQEPVV
                     KVGNLSSVRTFQDARDAIRAYYLLSLESQKGNIPCGEAFNIAGEEAFKLPEVIDILLN
                     FSDMGGGIEVRQVEDRMRPIDADYQMFDNSKIKSFIDWKAEIPVRQMLKDLLNHWRNE
                     IKRGRIPLNR"
     gene            complement(6633..7673)
                     /locus_tag="RJ266_001383"
     CDS             complement(6633..7673)
                     /locus_tag="RJ266_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002923011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HDV7355114.1"
                     /translation="MQKNSKIYIAGHGGTLGKTLYNTLIDEGFNNIIVKTRKELDLVD
                     QKAVTDFFAKEKPEYVFLCAAKLDTLGLFTPADVIYENSVLQANIIHSSYQNNVKKLI
                     FYGSAWAYPQKAINPIKEENLLDGKLDLKAVAYGLPKIIGTKMCESYNLQYGTNFITL
                     YLANLYGETTEFDLQKAKVLPALLRKFHLAKLLDENKIDEVLKDLQMNSLEQAMEYLQ
                     KFGVSKDSVEIWGGGSVIREFIHAKDLADASIYVMKNIDFKNIVSSNEPHLNVGSGEF
                     LSIKELAFLIKNIVGFKGEIVFNNSKPDSTMDRMLDSSRLQNLGWKAKIKLEDGIKMM
                     YEWYLKEQNIRQ"
     gene            complement(7673..8218)
                     /locus_tag="RJ266_001384"
     CDS             complement(7673..8218)
                     /locus_tag="RJ266_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase family
                     protein"
                     /protein_id="HDV7355115.1"
                     /translation="MAIEFDIQESKILKGVYIITPNKFRDLRGEIWTAFTSEAVDKLL
                     PNGLKFIHDKFIHSKHNVIRGIHGDVKTYKLATCVYGEVHQVVVDCRKDSPTYLKHER
                     FIINQDNQKIILVPAGFGNAHYVSSETAVYYYKCAYLGEYMDAPDQFTYAWNDERIGI
                     DWPTNNPILSERDILAMSKDK"
BASE COUNT         2751 a         1527 c          984 g         3145 t
ORIGIN      
        1 aaaatttggg tttctaattt tagcattaat ataagtttct aaaatacaaa taggatctcg
       61 agtgaaataa atacatttgg attttttagc tatcattaat aaatatttat cacatccttc
      121 aaatccataa tcaaatatat ctaaaaaaaa tattttttta gataaaaaag ttacataagc
      181 ttgataatat cggaatttac cttcggcctc atggtttaaa taactaggat tatgatatcc
      241 taaaaatttt aaaattgcca acacgctctt cattccgaca ccatgactac caaaaatcac
      301 aaactcatac ctatccggta agggcaaatt catctcccaa gcaagttcag caggtatatt
      361 tttataatta attttttcgt tttcatcatt tagtttcttg ggatcaagta aagaaggata
      421 aggatgactt ccttttttat atctttcatt aaaatcatct gataacaacc attcttctat
      481 aagatcaaaa ttttgtataa aataattaaa gttgtgaaag atattatcta gtattgcttt
      541 atagtcttga tgaattttta atatattttt tattcttgga aattctttta ggaatagttg
      601 tttattattt atcaatcctt caagaatgct agagttaatc tgatcaaatt ctttaaaaat
      661 ttctctaaaa atttgaaatt ctttatttgc ttttttaata tcatttttta gtttaaatcc
      721 acttccttta tgccaagttt tatcagcctt gattaaaact tcacccagca tataggacaa
      781 atgaaattta tatcttaaag cttgttcata atcaccacat gtttctaaac ttggatattt
      841 gagctgagga aagatttgta tagtttgttg ataaattttt tgttcttttt tatgttgttt
      901 tttgatttta tagagttttt taaataatgc tatatacccc cccccattgt ttgtaaagtc
      961 aatcatagct tgacctagtt tataagcaag atgatttttt actctttcta tagctgagtt
     1021 tgggttatac atagggtttc tcctttaaaa atagctttgg ttgcttgtaa aattataata
     1081 atcctcaggc acgccaatat ctataaaata atcatcaaaa atacaagctc tagcctttag
     1141 ctttttataa ttttcttgta aaaactcttc aaaagaaaat ttttcctgca aagcaaaatc
     1201 attaaaaata tctttagtta aaagataaat tccaccattg attaaacctt gctttttaaa
     1261 taccttttcc tcaaaggaaa tcacaagccc atgcttatca atatttatca tgccgtatct
     1321 atcaaaatca ttcatttgtt ttaaagcgag gcaaatttta cttctattta gctttaattt
     1381 acttaaatct atgtcaaaaa aagtatcgcc atttaaaaca taagcctcgt tttttataaa
     1441 tttcaaagcc tcttttatgg ctccgcctgt tcctagaggc tctttttcga tactgtattt
     1501 tatttttata cctaaaaact catctttaaa atactctttt atcacttcat atttgtatga
     1561 tactgctaag ataatctctt ttatgccttg ttttttaaga tactcaaaaa taaattctaa
     1621 aaaaggttta ttatttatcg gtgccatagg ctttggaatg tcctttataa cacttttaag
     1681 tcttgttcct aagccgccac aaagtattat tgcttgcaaa aaaaaccttt accgaaaagc
     1741 tcttcttcga caatagcaca aataatatgt cctattaaaa tatgtgcttc ttgaattctt
     1801 ggcgtgcaag ttgaaggcac ttttatacaa taatcacaaa gttcattcat cgctccacca
     1861 ctaactccac ttaagcctat acttatgatt tctttttgtt tgcaaagctc taaagctttt
     1921 aagatatttt tactatttcc gcttgttgaa atgcctataa aaacatctcc tttaacacct
     1981 tgagcttgca cttgtctagc aaataaattt tcataaccat aatcattccc gatagctgtt
     2041 aaaatacttg tatctgtcgt aagtgcgata cttgcaatac cgggcctatc aaaataaaac
     2101 ctacttacaa attcccctgc aatatgctgt gcatctgctg cgctaccacc gtttcctgct
     2161 aataaagttt tgttaccatt tttataagct tttatgactt ctaatgaagc atttttaata
     2221 agagttatca aattctcatc ttttaaaatt tgctctttta ctaaaattga ttcttgaaaa
     2281 tgttctttta tatataaatt tataacttcc atgattttta tttacccttt gaaaatttga
     2341 aacattcgat cccttttgca gttcttataa catctccttg aaaatatttc ttccttataa
     2401 aatctagaat ttcattttca tatgcatata cttcatgaga tggtatagcc ataattaaac
     2461 aatccaattt ttctaaactt ttccgatctg gatagtttat taaaatattt gaattaacca
     2521 tatatttacc aactttatct ctattaattt cgaaagcaca aacaattttc aataaatttt
     2581 tataattcaa atgattgatt aatgtatgcc cttgcacacc agcgccataa atacctatat
     2641 tcttataccg agataaaaca tcatttatat attttatttc aatatcaaaa ctatctttta
     2701 tgttattata gaaaacaaat ggttcttgat atttcctaat ttgttttttt aaaaaaaata
     2761 aacctatgtg ttgttcatca aaatatttca ctttttcaat aagtttacac cctaaatgat
     2821 tcataatatt tactaaagta gcctcttgat aataaccaca atgatcatga taaatatcaa
     2881 taaatctttt atatcttaaa atatcatgtg cattcggaac ctccaagtaa atcataccat
     2941 tttcatctaa atactctaca atatctttta aaaaaatttt agggttatca atgtgttcta
     3001 ataaatgtct aaatactata aaattaattt tattatcaac ctgctcatct aaaaatttct
     3061 tactaaaaaa tccttgtata tgtttcatat ttttcgtttt gtcataattt gaacttgatt
     3121 tagaaggatc tatagtataa ataaaactaa cttctctaga taatgctaaa gcaagatcac
     3181 ctctgcctgg tgcaatttcc aaaaaaatat cagtattttt ggcgtatttc attatagtat
     3241 ttttaatttc tattatatgt ttattcaaac gagaggtaaa attttttgtt tgataatacc
     3301 cagcactcga atacattttc tgcatctcat ttttattaaa agcaagattt tctatataac
     3361 cacatttgtc gcactgcgat aattttatac tccccccccc ctctagcata attatgtaaa
     3421 tgcatgctag gtttttcttg taaattttca gcagaaataa aaatattatt ggctttaaat
     3481 ataatattct catgatatac ttggccgcat aaactacatt tttgtaaatt attcatattc
     3541 tccatgattt aaccccctct tttgtaaatg aaaaatcttg tacataacct tgttcctttc
     3601 ttaaagcttt gattaagttg tattttttag taggatctac gaagaaaaac ataaatccac
     3661 ctgctcctgc tccactggtt ttaccactat aagctccgtt atctatagcg agtttataaa
     3721 ttctttcaag ctcatcattg ctaacgattt cagaaatgat tttttttgac tgccaagact
     3781 tacctaaaat ttgtgccaaa gtatcaaaat cagccttaaa taaagcttct ttcatcttta
     3841 tagcatcttg ctttatggca tgcatggctt caagggattt ttcatcccca agcttccctt
     3901 ttttatgctc ttctatatct tttgcttctc ttgtgatatt tgtaaaataa agcacggttc
     3961 tagcttcaag ttcactagct atccagtttt taatacgcaa aggattgaca atgactcttt
     4021 tattatcata aaattccata aaattaaatc ctccaaaagt tgcagcgtat tgatcttgtg
     4081 ctccacccac tatgcctaaa tcttctcttt ctatctcata agcaagccta gctatttcat
     4141 attctcctaa gggtaaatta agccactcta caaaagcctt tataacacct acaaccaaag
     4201 ttgagcttcc acctagtcca ctaccacttg gcacatcaga ataagtgtgc aaagaaaaac
     4261 tcaaaggttt ttttgtaaaa tcttttacaa tgcgattata aatactttta aaaatatcta
     4321 attttccatc attttttaag aattctttac tttcatgctc agagtaagaa tttgtatcag
     4381 gagaatcaaa gatgattttt ccatcttctc tttcgatcaa agtgcaatgt atatataaag
     4441 atatagttgc atttaaaaca taacctgtat atttatcaca atatagattt atatcagttc
     4501 ctccacctgc taaaccaaga cgaagcgggg tttgtgtacg tatagttttc attaaatcac
     4561 tacttatttt gctataattt attataaaaa ttatagcaaa attatactta acttatgtta
     4621 atatcattta aacatttgca aagcaattaa ctttcatcat tttaaacgcc cttaaaagct
     4681 cttcaatgcc atcttctaaa gtattatctg gtttccaacc tgtagcctct aatttagcat
     4741 ttgaaaccaa ataatctctt ttatccggat cttcacctat gctggctgaa tggatataaa
     4801 aatcaggaat atacttttta atcgtttcag caagctgtct tttagtcaaa tttgcagaac
     4861 ttaatcccat attataagcc tgacccttca tcttattata attctcaatt ccatgaataa
     4921 atcctttaac cacatcacga acatgaatat aattgcgtct aaaatgctct tcaaaaagca
     4981 ctataaattt atccttatat gcacgatagg taaaatcatt aacaagtaaa tcaagtctca
     5041 ttctaggtga aattccaaaa acagtagcca aacgaaaagt tacacaattt cctttatcaa
     5101 gcaaatattg ctccgcatgc actttatcga tcccatattc tgagatagga cgcaagggag
     5161 attcttcagt acacattgca tctttttctc ctataccata accgctattt gtattaggat
     5221 aaataaatat ttgagaagag cttgcaaaat cactgatcat tttcacagct tcataattga
     5281 tcattttggc taattttgga tttcttttgc aaagtggagc tccaaccaaa gcagctaggg
     5341 gaataataat atcagctttt gctacctctt gtctgataag attttcatcc atagcatcac
     5401 catttataaa agtaaaattt ttattatgag aacaagataa aagagagatt tgatcaaaca
     5461 tcaaattatc aatcacacaa acttcataac ctttttcaag taaaatcggt gttaaaaccg
     5521 aacctatata acctgcacca cctgtaatta aaactttttt tgacatattt ttcctttaaa
     5581 tcgatggttt tatcgattta aaggaattct gcctctctta atttcatttc tccaatgatt
     5641 tagcaaatct ttaagcattt gtctaacagg aatttcagct ttccaatcga taaaactctt
     5701 tattttacta ttatcaaaca tttgatagtc agcatcaata ggacgcatcc tatcttcaac
     5761 ttgtcttacc tcaatacccc cccccatatc actaaaattt agcaatatat ctataacttc
     5821 aggaagttta aaagcttctt ctcctgctat attaaaagct tccccacaag gaatattacc
     5881 cttttgactc tcaagcgaaa gtagataata agcccttata gcatctctgg catcttgaaa
     5941 ggttcttaca cttgaaagat ttccaacctt gacaacaggc tcttgatagc ccgcttcaat
     6001 caaagcaatt tgttttgcaa ccgtgctttc aaaaaacaca tcagaacgtc ttgggccact
     6061 atgtgttccc attcttgtaa caaaggtgcg aatgttataa gcttcgccat aaaatcttcc
     6121 caaataatcc gtgccaattt tgcttatact gtaaggactt gcaccgtgaa aagctgtttc
     6181 ttcattaagt ttaacacctg cttttgcttt accataaact tcacttgaag agcagatatg
     6241 cactacagga tcatatccat cttttgcctt taaaattcta atgttttcca aaatatttgc
     6301 tgtgcctatt atgttagttt gtagggtttc tataggtata tcaaaagaag tttttggata
     6361 agattgagct gctaggtgaa aaatcgcatc aggtctttgg ctttcaaaaa gtttttgaag
     6421 actagagtaa tcatttaaat ctgcgtaaaa aatgctgatt ctatcttttt tattaatcct
     6481 atcacttaaa tgatagatat tgtccatagg ttcttgccaa cgcatcattc ctataacatc
     6541 atagtctgta ttttctagca aaaaatccgc catttgcgag ccaacttgcc ctgtaaatcc
     6601 tgtaattaat gctgtttttt tcatgatttt tcctattgtc ttatattttg ctcttttaaa
     6661 taccattcat acatcatctt aatgccatct tcaagcttga tttttgcctt ccagcctaaa
     6721 ttttgcaatc ttgaactgtc taacattcta tccattgtag aatctggttt tgaattgtta
     6781 aacacaattt cacccttaaa tccaacaata tttttaatca aaaaagcaag ttctttgata
     6841 cttaaaaatt ccccacttcc tacattaaga tgcggttcat tagatgaaac aatattttta
     6901 aaatctatat ttttcatcac ataaatagaa gcatcagcta aatcttttgc atgaataaat
     6961 tccctaatta cactaccacc accccaaatt tctacgctat ctttacttac accaaatttt
     7021 tgtaaatatt ccattgcttg ctctaaggaa ttcatttgca aatcctttaa aacctcatca
     7081 attttatttt catctaaaag ttttgctaaa tgaaatttgc gaagcaaagc tggtaaaact
     7141 tttgcttttt gtaaatcaaa ctcggttgtc tctccataca aatttgcaag atacaaagtg
     7201 ataaaatttg ttccatattg caaattataa ctttcgcaca tttttgttcc tataattttt
     7261 ggtaaaccat atgcaacggc ttttaaatct agctttccat ctaataaatt ctcttcttta
     7321 atgggattta tagctttttg agggtaagcc caagcagaac cataaaaaat tagcttttta
     7381 acattatttt gataagatga atgaatgata tttgcttgaa gtacgctatt ttcatagatt
     7441 acatcggctg gagtaaaaag ccctaaagta tcaagcttgg cagcacataa aaaaacatat
     7501 tctggttttt cttttgcaaa aaaatcagtc acagcttttt gatctactaa atctaattct
     7561 tttcttgttt ttacgataat attattaaaa ccctcatcta taagtgtatt ataaagagtt
     7621 tttcctaagg taccaccatg tcctgctatg taaattttgg aatttttttg cattatttat
     7681 ccttactcat agctaaaata tcacgctccg aaagaatagg attattagta ggccaatcta
     7741 tgcctattct ttcatcattc catgcataag taaattgatc aggagcatcc atatactctc
     7801 ctaaataagc acatttataa taataaactg cagtttcact actaacataa tgagcatttc
     7861 caaaacccgc tggaactaag ataatttttt gattatcttg atttatgatg aatctttcat
     7921 gctttaaata agttggggaa tcttttctgc aatcaaccac aacttgatgc acttctccat
     7981 agacacaagt ggctaactta taagttttta catcaccatg gataccgcga ataacattat
     8041 gtttagaatg tatgaattta tcgtgtataa attttaatcc atttggcaag agtttatcta
     8101 cagcctcgct tgtaaaagct gtccaaattt cacctcttaa atctctaaat ttgttaggag
     8161 ttatgatata cactcctttt aaaatttttg attcttgtat atcaaattct attgccatta
     8221 ttttcctttt ttgtatttaa aattcttata aagcatgtat attttataag gcaaaataaa
     8281 ataagctcct ttataccaag actggtgagc ttgaatcatt attttaccta tattataaga
     8341 taaatagtgc tcaattcttt ttgcattgct ataatcataa cattgttcaa atgatggaat
     8401 attaata
//
LOCUS       DAPIWB010000063         7954 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.064, whole genome shotgun sequence.
ACCESSION   DAPIWB010000063 DAPIWB010000000
VERSION     DAPIWB010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7954)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7954)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7954
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.064"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            96..3608
                     /locus_tag="RJ266_001385"
     CDS             96..3608
                     /locus_tag="RJ266_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-[ACP]--phospholipid O-acyltransferase"
                     /protein_id="HDV7355116.1"
                     /translation="MQKKSFLKIYGLIPFLLIAFINAFVDLGHKIIIQNTIYKAYEGS
                     DQLFLNAIVNALILLPFILMLSPSGFLADKYPKNIVMKISAIFNVILTLIICICYYSG
                     AFWMAFIFTFIMGAQAALYSPSKYGFIKELVGKDFLAMGNGVINAVSIMAILAGMALF
                     SLSFESLYSSAYNQTDEILKEVAPLGIVLILFSCIEVFFACRLPKLKQINKDLVFNKK
                     DYIRGKLLINNLKLVFKNKTIWLCIIGISFFWAISQLYLVSFPVFAKNELFIENTFYV
                     QISLAFSGIGVILGSLVAGKFSKNYIELGLIPLGALGMFLMAFLMPYFISLLSYSFLF
                     FFFGFCGALFIIPLNTLIQFHTKENELGQILAGNNFFQNIAMLGFLLLATLFAKFEIN
                     VVYLFYFITLVTFIGSFYILLKLPFSLVRILLSIAFLQRYRLLVEGFENIPEKGGALL
                     LGNHISFIDWAVVQMAIPRKIYFVMERSIYSKWYIKFFLDKFGIIPVSSTGSKTSLEL
                     IAKHIKEGNLVCLFPEGTLSRHGQLNEFKAGFELACECLSEDDGKIIPFYIRGLWGSA
                     FSRSDEEFSARNRTLNKRKIAIAFGKAMPLHSKKDEVKAKVFELSFMAWKSQCEAMHT
                     IARSWIDTAKKNLNQIAIIDTLAGDISYRKMLTLSLFLNFFIKRKSKELNINLQRGSY
                     APKEEAIGILLPASFASSLTNLSVLIAEKIAVNLNFTAGEKALKTAIKNAQISQIYTS
                     KTFLEKLSNKGINLNFDTNIHLIYFEDIVEDFKMQKTKIFSMMLAVSIIPSFILKTIF
                     TPSKNNLAIAAILFSSGSEGSPKGVMLNNRNILSNIAQISDVLCTRNNDVILSSLPPF
                     HAFGLTVTTFLPLLEGIKSITFSDPTDALGIAKAVAKNNVTIMCGTSTFLGIYARNKK
                     LDALMFESLRIVVSGAEKLKNEVRTAFEMKFKKSIFEGYGATETTPVASVNLPNRFDA
                     DYWLIHRANKEGSVGMPLPGTAVRIVDPNNYENLKTNEDGLILIGGHQVMVGYLNDKE
                     KTDEVVKEIDGIRWYNTGDKGHLDEDGFLYIVDRYSRFAKIGGEMISLGAIEEEIAKF
                     IDTEVVKFCATSLEDEKKGEQIVLLIECNNEIFEGVCEAIKNSNIPTLFKPRYYFQIE
                     KIPLLGSGKVDLKKVKELAKNLAI"
     gene            complement(3616..4527)
                     /locus_tag="RJ266_001386"
     CDS             complement(3616..4527)
                     /locus_tag="RJ266_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HDV7355117.1"
                     /translation="MFVFIPLFTIFILLAGGYFAKRIGVLKQKQARTFLDFAIIFALP
                     CLIFDKAYHLNFNFSLIIFIFIGLFSCILAAFFAIFIGKVFHFSKVTLVSMFLLSCFG
                     NTIFVGMPIVAGVFNDPQFSAEVIFYDALATTLPISLFGPFILSLGNGEKVSLLTNVK
                     KILSFPPFLALLFGFLCKLIALPEFIFSPIRLFGASATPVALFAIGLGLGFMAIKTSY
                     KPTVVVIFAKMILAPLFFVFCLKIFNLELKDSTIVAIIESAAPTMTLAGAMVMKAKLD
                     SNLAVSAVAFGVLFAFVSMPILIWTLL"
     gene            complement(4724..4809)
                     /locus_tag="RJ266_001387"
     tRNA            complement(4724..4809)
                     /locus_tag="RJ266_001387"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4773..4775),aa:Leu,seq:gag)
     gene            complement(4844..5182)
                     /locus_tag="RJ266_001388"
     CDS             complement(4844..5182)
                     /locus_tag="RJ266_001388"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HDV7355118.1"
                     /translation="MKKVLFLLLACAAVAFAAETNTPVEQEAINVWIKAFSVLAAGLG
                     LGVAALGGAIGMGNTAAATIAGTARNPGLGPKLMTTMFIALAMIEAQVIYALVIALIA
                     LYANPFIVLQ"
     gene            5416..6750
                     /locus_tag="RJ266_001389"
     CDS             5416..6750
                     /locus_tag="RJ266_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDV7355119.1"
                     /translation="MSSKFSKIGFILAVAGSAVGLGNAWKFPTLVGQSGGSAFILLYI
                     ILTLGVGFVIFLAELSIGKISEKDPVNAYEKLAPSNKKAWSYVGFTMVGAILIVSFYT
                     LVIGWIVKYVFLSITGNLPMDLEVSKAQFGFFISEDFLSQFICFTLVFLCVFYIVSKG
                     VKNGIEKLNVWMMPSLFILLILMLVYAMSKDGFIMAVKFLFVPDFSKINTSNVLEALG
                     LAFFSLSLGVGTIITYSASLPDKTNFITSTLNIIFINLLVGLLMGLVVFTFIFEFGYN
                     PNQQGPGLVFISLATLFEKIGVIGCIFGAAFFISLIFAGITSAVSMIEPFAFYLINTF
                     GMSRKKALILIGIVVYILGMLCILSSLKSTQFGFFGMSFFDLLDSVSSKVIMPLGGIL
                     AAIFVGFVMKKEALKILFEPYMRGIFFELWYVFLRFISPLAVVIVMIAAFLK"
     gene            6763..>7954
                     /locus_tag="RJ266_001390"
     CDS             6763..>7954
                     /locus_tag="RJ266_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDV7355120.1"
                     /translation="MRTYFSKIGFVLAVAGGAVGLGNAWKFPTLSAENGGFVFVLLYL
                     FFTLTIGFSIFLAEVAMGRLSKSDLANAYSNLAIKYGNRWRYGGVFMLGGIFVLSFYL
                     VIMGWVLKYTVVSLYYLPKTLDEAASNFQNLITTNLTSSVFFFTLSFFLTLLIVSKGL
                     IKGIEKLNVVIMPSLFLMLVFMLFYCMGFKQGFANAFSYLFYPDFLHFKFSSIAEALG
                     LAFFTLCLGIGCIVTYSSALDKKTNFIKSSVYIVLINLLISFIMGLIVFTFIFEFGAD
                     PHTQGAGIVFISLMSLFNQLGALGYIFAFCFFLALFFAGITSAVSMIEPLTFYMINNY
                     QISRVKALFLIGLFVFVFGICCILSLNLNFFSMFSFFGKDFFTLLDKLTSNFLLPLGA
                     IVCSI"
BASE COUNT         2585 a         1033 c         1328 g         3008 t
ORIGIN      
        1 atcgatggaa ttattttaaa agataatata gataattttc ctaaaaactg ataaattctt
       61 ttgtaaaata agtgctaatt gacgaggttt aaataatgca aaaaaaatct tttttgaaaa
      121 tttacggatt aattcctttt ttacttatag cattcatcaa tgcttttgtg gatttgggac
      181 ataaaattat tattcaaaat actatttata aggcctatga aggaagtgat cagttatttt
      241 taaatgctat agttaatgct ttgattttac ttccttttat tcttatgctt tctccttcgg
      301 gttttttagc ggataaatat ccaaaaaata ttgtaatgaa aatttcagca attttcaatg
      361 ttatactcac tttaataatt tgcatttgtt actatagcgg tgctttttgg atggctttta
      421 tttttacttt tataatggga gcacaagcag cactttattc accaagtaaa tacggtttta
      481 ttaaagaact cgtaggaaaa gactttcttg ctatgggtaa tggtgtaatt aatgcagtaa
      541 gcattatggc aatcttagca ggaatggctt tgttttcttt aagttttgaa agtctttata
      601 gttctgcata taatcaaaca gatgaaattt taaaagaagt agcgccttta ggaattgtgc
      661 taattttatt ttcttgtatc gaagtatttt ttgcgtgtcg tttacctaag ctcaaacaaa
      721 taaataaaga tttagttttt aataaaaaag attatatccg tggaaaactt ctaataaata
      781 atcttaagct tgtttttaaa aataaaacta tttggctttg cataatagga atttcatttt
      841 tttgggctat atctcaactt tatcttgtca gctttcctgt ctttgctaaa aatgaacttt
      901 ttatagaaaa tactttttat gtgcaaattt cactcgcttt ttctggtata ggagtgattt
      961 taggctcttt agtagctggt aaattttcaa aaaattatat agaacttgga cttattccac
     1021 ttggtgcatt gggtatgttt ttaatggctt ttttaatgcc ttattttata agtttattaa
     1081 gttatagttt tttatttttc ttttttggat tttgcggagc tctttttatc attcctttaa
     1141 atactttaat ccaatttcat accaaagaaa atgaattggg acaaattctt gcaggaaata
     1201 atttttttca aaatattgcc atgttaggat ttttactctt agcaacttta tttgcaaaat
     1261 ttgaaatcaa tgtggtttat ttgttttatt ttattacttt agtaaccttt ataggaagtt
     1321 tttatatact tttaaaactt cccttttctt tagtgcgtat acttttaagc atagcttttt
     1381 tgcaacgata ccgcttgctt gtagaaggtt ttgaaaatat accagaaaaa ggtggagctt
     1441 tgcttttggg taatcatatt tcttttattg attgggctgt tgtacaaatg gcaattccaa
     1501 gaaaaattta ttttgttatg gaaagaagta tttattctaa atggtatatt aaattttttc
     1561 ttgataaatt tggcattatt cccgtatcaa gcacgggaag taagacgagt ttagaactga
     1621 tagcaaagca tattaaagaa ggtaatttgg tttgcttatt tcctgaaggt acgctttcaa
     1681 gacatggaca attaaatgaa tttaaagcag gatttgaatt agcttgtgaa tgtttaagtg
     1741 aagatgatgg aaaaattatt cctttttata taagagggct ttggggtagc gctttttcaa
     1801 gaagcgatga agaattttca gcaagaaacc gcactttaaa taaaagaaaa attgctatag
     1861 cttttggtaa agccatgcct ttgcattcta aaaaagatga agttaaagct aaagtttttg
     1921 aactttcttt tatggcttgg aaatcacaat gcgaagctat gcatactata gcaagatctt
     1981 ggatagatac agctaaaaaa aatctaaatc aaatagctat tatcgataca ctagctggag
     2041 atatttctta tagaaaaatg ttgactctta gtttatttct taattttttt attaaaagaa
     2101 aatccaaaga attaaacatt aaccttcagc gtggaagtta cgctcctaaa gaggaagcta
     2161 taggaatttt actacctgct tcttttgcaa gttctttaac caatctatct gttttaatcg
     2221 cagaaaaaat tgcagtaaat cttaatttca ctgctggaga aaaagcttta aaaacagcta
     2281 taaaaaatgc gcaaatttca caaatttata cttctaaaac ttttttagaa aaattatcaa
     2341 ataaaggtat aaacctaaat ttcgatacaa atatacattt aatttatttt gaagatattg
     2401 tagaagattt taaaatgcaa aaaactaaaa tttttagcat gatgctagca gttagtatta
     2461 tacctagttt tatactcaaa accattttca ctccttcaaa aaacaatctt gccatagcag
     2521 ctattttatt tagtagtgga agcgaaggtt ctccaaaagg tgttatgcta aataaccgta
     2581 atattttaag caatatagca caaatttctg atgtgctttg cacaagaaat aatgatgtca
     2641 ttctctcatc tttgccacct tttcatgctt ttggacttac agtaactacg tttttgcctt
     2701 tgcttgaagg tattaaaagc atcacttttt cagatccaac cgatgcctta gggattgcca
     2761 aagctgttgc taaaaataat gtcactatta tgtgtggaac ttcaaccttt ttaggaattt
     2821 atgcaagaaa taaaaagctt gatgctttaa tgtttgaaag cttaagaata gttgtatcag
     2881 gtgctgaaaa actaaaaaat gaagtaagaa ctgcttttga aatgaagttt aaaaaaagca
     2941 tttttgaagg ttatggggct acggaaacca cacctgtagc gagtgtaaat ttgccgaatc
     3001 gttttgatgc ggattattgg cttatacatc gtgccaataa agaaggaagc gtaggaatgc
     3061 ctctacctgg aactgcggta cgtattgttg atccaaataa ttatgaaaat ttaaaaacaa
     3121 atgaagatgg actcatactt ataggcggtc atcaagttat ggtaggctat cttaatgaca
     3181 aagaaaaaac cgatgaagtg gttaaagaaa ttgatggcat aagatggtac aacacgggag
     3241 ataagggaca tttggatgaa gatggttttt tatatattgt cgatcgttat tctcgctttg
     3301 caaaaattgg cggagagatg atttctttgg gtgcaataga agaagaaatt gccaaattta
     3361 tagacactga agtggttaaa ttttgtgcca catctttaga agatgagaaa aaaggggaac
     3421 aaattgtttt actcatagaa tgcaataatg aaatttttga aggagtatgt gaggctataa
     3481 aaaattctaa tatacctaca ctttttaaac ctagatatta ttttcaaata gaaaaaattc
     3541 ccctcctagg ttcaggaaaa gttgatctta aaaaagttaa agaattagct aaaaatttag
     3601 ccatataatt tgagcttata acaaagtcca aattaaaatt ggcatagaaa caaaagcaaa
     3661 aagaactcca aaggctacag cacttacggc taaattgcta tctagtttag ctttcattac
     3721 catagctcct gctaaggtca tagtaggagc tgcgctttct ataatagcaa cgatggtaga
     3781 atcttttaat tctaaattaa atattttcaa acaaaataca aaaaataaag gagctaaaat
     3841 cattttagca aagatgacaa ctactgtagg tttgtaagag gttttaatcg ccataaagcc
     3901 aagtcctaaa cctatagcaa aaagtgcaac aggggttgca gaggcaccaa ataaacgaat
     3961 aggagagaaa ataaattcag gtaaagcaat taatttacac aaaaaaccaa aaagcaaagc
     4021 taaaaaaggt ggaaaactaa gaattttttt aacattagta agcaaactga ctttttctcc
     4081 atttcccaaa gaaagtataa aaggtccaaa aagtgatata ggtaaagttg tagctaaagc
     4141 atcgtaaaat ataacttcag cgctaaattg tgggtcatta aatacaccag caacaatagg
     4201 catacccaca aatatagtat ttccaaaaca agaaagcaaa aacatactga ctaaagttac
     4261 tttagaaaaa tgaaaaactt ttccaataaa aatagcaaaa aaggctgcta atatacagct
     4321 aaacaatcca ataaaaataa aaataatcaa tgaaaaatta aaatttaaat gatatgcttt
     4381 atcgaaaatc aaacaaggta aagcaaaaat aatagcaaaa tctaaaaaag tcctagcttg
     4441 tttttgcttt aaaacgccaa ttcttttggc aaaatatccg cctgcaagta aaataaaaat
     4501 tgtaaataat ggtataaaaa caaacattga ataatccttt ttaagggata ttttttgaaa
     4561 acggatagaa ttatattctt tatacttaaa aaaaatctta atatttttta agttttttaa
     4621 aaaaccaata tttttttatt ttttgtaact ttaagaaatt gtaagttgaa atttgatttt
     4681 gaatagttag tattttaagc tgaatgatta taattttaaa taatggtgcg gttagcgaga
     4741 tttgaactcg cacacgcgga gcgcaccacc ccctcaagat ggcgtgtcta ccaattccac
     4801 cataaccgca tagaaaaaag cccaaaaagg gctttgataa gttttattgt aaaactataa
     4861 aaggatttgc ataaagtgct attagagcga taacaagagc atagatcact tgtgcttcaa
     4921 tcatcgctaa agcgataaac atagttgtca ttaattttgg tccaaggcca gggtttctag
     4981 ctgttcctgc aattgttgcc gctgcagtat tacccatacc gatagcacca ccaagtgctg
     5041 caacaccaag acctaagcct gctgcaagaa ctgaaaatgc tttaatccat acattaatag
     5101 cttcttgctc tactggagta ttagtttcag ctgcaaaagc tactgctgca catgctaata
     5161 ataaaaaaag aacttttttc attatcttaa cctttctata aaaaatattt ttcaattttt
     5221 aaatcagttc ggcttgcgta tccctactta agacttaaaa ataaatccga attataacca
     5281 aaaatatctt tatttttatt gaaaattaca aaaattcaca tttttgattt aaatttgatt
     5341 gttttcaata aagcttaaaa gtttttttgc tttaataata ttttaaaata attttttaag
     5401 tttaaggttg taacattgag ttctaaattt tcaaaaatag gtttcatttt agcggtagca
     5461 ggttcagcag tgggtttggg taatgcttgg aaatttccaa cactagtagg tcaaagtggt
     5521 ggatctgctt ttatcttgct ttatataatt cttactttgg gtgtaggttt tgtgatattt
     5581 ttagctgagc ttagcatagg aaaaattagt gaaaaagatc cggttaatgc ctatgaaaag
     5641 ttagcacctt caaataaaaa agcttggtct tatgttggtt ttactatggt gggggcgatt
     5701 ttaatagttt ctttttatac cttggtgatt ggctggatag ttaaatatgt gtttttaagt
     5761 atcactggaa atttgcctat ggatctagaa gtaagtaaag cgcagtttgg attttttata
     5821 agtgaggatt ttttaagtca gtttatttgt tttactttgg tttttttatg tgttttttat
     5881 attgtttcta aaggtgttaa gaatgggatt gaaaagttaa atgtttggat gatgccttca
     5941 ttgtttattt tacttatttt gatgcttgtt tatgctatga gcaaagatgg ttttataatg
     6001 gcggttaaat ttctttttgt acctgatttt tccaaaatca acacttcaaa tgttcttgaa
     6061 gccttaggac ttgctttttt tagtctttct ttgggcgttg gaacgattat tacttattct
     6121 gctagtctgc ctgataaaac taattttatt accagtactt taaatattat ttttatcaat
     6181 cttttagttg gtttattaat gggtttggtt gtttttactt ttatctttga atttggttac
     6241 aatcctaatc agcaaggacc aggacttgtt tttatttcct tggctacttt atttgaaaaa
     6301 attggggtga ttggttgtat ttttggagca gcatttttta tttctttaat ctttgctggt
     6361 attacttcag ctgtttcaat gatagagcct tttgcttttt atcttattaa tacttttggc
     6421 atgagccgta aaaaagcttt gattttaata ggaattgttg tttatatttt aggaatgttg
     6481 tgtattttat cttctttaaa aagtactcag tttggatttt ttggaatgag tttttttgat
     6541 ttgcttgata gtgtttcaag caaggttatt atgcctttag gtggaatttt ggcagctatt
     6601 tttgtgggat ttgtgatgaa aaaagaagct ttaaaaattt tatttgaacc ttatatgagg
     6661 ggtatatttt ttgaactttg gtatgtgttt ttgagattta tttccccttt ggctgttgtt
     6721 atagttatga tagccgcttt tttaaagtga gtttgaaaaa taatgagaac atatttttca
     6781 aaaatcggtt ttgtattggc tgttgctggt ggagccgttg gtttaggtaa tgcttggaaa
     6841 tttccaactt taagcgcaga aaatggtggt tttgtttttg tgcttttata tttgtttttt
     6901 actttaacta taggatttag tatttttttg gctgaagtgg ctatgggacg tttaagtaaa
     6961 agtgatcttg caaatgctta ttcaaatctt gccataaaat atggcaatag atggcgatat
     7021 ggcggcgttt ttatgttagg tggtattttt gtcctctctt tttatctagt tatcatggga
     7081 tgggttttaa aatatactgt agtgagtctt tattatcttc ctaaaacttt agatgaagca
     7141 gcaagtaatt ttcagaattt aattactaca aatttgacaa gttctgtttt tttcttcact
     7201 ttatcttttt ttcttacttt attgatagta tctaaaggtt taatcaaagg gattgaaaaa
     7261 ttaaacgttg ttataatgcc tagcttattt ttaatgcttg tttttatgtt gttttattgc
     7321 atgggattta agcaaggttt tgcaaatgct ttttcttatt tattttatcc cgatttttta
     7381 cattttaaat tcagctctat tgccgaagct ttagggcttg cattttttac cttatgcttg
     7441 ggaataggtt gtatagttac atattcatcg gccttggata aaaaaacaaa ttttataaaa
     7501 agttcagtgt atattgtttt gattaattta ttgatttctt ttatcatggg acttattgtt
     7561 tttactttta tctttgaatt tggagccgat ccgcatactc aaggagcagg aattgttttt
     7621 atatccttga tgagtttgtt taatcaactt ggagctttag gctatatttt tgcattttgt
     7681 tttttcttag cacttttttt tgctggtatt acttcagctg tttcaatgat agagccttta
     7741 actttttata tgattaataa ctatcaaatt tctcgtgtta aagctctatt tttaataggt
     7801 ttatttgttt ttgtttttgg aatttgttgt atcttgtcat taaatttaaa ttttttttct
     7861 atgtttagtt tttttggtaa agattttttt actttattag ataaattaac ttcaaatttt
     7921 ttacttccac ttggtgctat agtatgctct atat
//
LOCUS       DAPIWB010000064         7704 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.065, whole genome shotgun sequence.
ACCESSION   DAPIWB010000064 DAPIWB010000000
VERSION     DAPIWB010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7704)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7704)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7704
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.065"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            19..2694
                     /locus_tag="RJ266_001391"
     CDS             19..2694
                     /locus_tag="RJ266_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsK"
                     /protein_id="HDV7355121.1"
                     /translation="MAFFSTLLLFSVFYREFGYILEIVYGFFSIILGRTGSGIFALLL
                     LLFSLVLLFPKFAKEILKIELDFTYLLKVEQAFKSLLMRVFGGENEKEDVGKSEPIAP
                     KLNILQDSIYGNLQINKKGETNNLGQIIKDSNINASKNSITTAKENFEKLKNQILDET
                     IEIDKQSLKESRSFVHEHSQQVRNFAQKASKMSISLDEDFNFISEEEVDMIPERFLKP
                     KKLEDIKQIDTNKNLDEPSYKRKNIEIPVSNQEVKPKIFTKELELRENLIKKEKLEQE
                     YKAYQNEILENKVKQEIKKLEEYDAINSSDIIEGNKYSFNSPKTIKTETEESDKINEN
                     KNLDKADNIFEFAPIVEELNHPYIEPTPIKNINEIVIEEKNTLDFIQNTETKIDNEKT
                     NDQEIKLQKAVLAKEIAINQALLREIEQGEVEKPKDFTLPPLDFLANPKEHKQEINES
                     EIDKKIYNLLEKLRRFKIGGDVISTYVGPVVTTFEFRPSADVKVSRILNLQDDLTMAL
                     MAKSIRIQAPIPGKDVVGIEVPNDEIQTIYLREILQSEVFKNAKSPLTIALGKDIVGN
                     AFVTDLKKLPHLLIAGTTGSGKSVGINSMLLSLLYRNSPKTLRLMMIDPKMLEFSIYN
                     DIPHLLTPVITDPKKAVNALSNMVAEMERRYRLMADAKTKNIENYNEKMKELGGEELP
                     FIVVIIDELADLMMTAGKDVEFYIGRLAQMARASGIHLIVATQRPSVDVVTGLIKANL
                     PSRISYKVGQKIDSKVILDAMGAESLLGRGDCLFTPPGTSSIVRLHAPFASEFEIEKI
                     VDFLKDQQSVEYDESFLKDQQSVGVTTNESFDGEVDELYEEAKRVILEDGKTSISYLQ
                     RRLKIGYNRSANIIEQLTQNGILSEPDAKGQREIL"
     gene            complement(2780..3052)
                     /gene="rpsO"
                     /locus_tag="RJ266_001392"
     CDS             complement(2780..3052)
                     /gene="rpsO"
                     /locus_tag="RJ266_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HDV7355122.1"
                     /translation="MALDSAKKAEIVAKFAKKPGDTGSTEVQVALLTARIAELTEHLK
                     IYKKDFSSRLGLLKLVGQRKRLLSYLKRKDYNSYSKLITELNLRDK"
     gene            3227..3637
                     /locus_tag="RJ266_001393"
     CDS             3227..3637
                     /locus_tag="RJ266_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RrF2 family transcriptional regulator"
                     /protein_id="HDV7355123.1"
                     /translation="MLFTKASEYALLSLIYISQKETPQDVDSLALELDIPKSFLAKIL
                     QTLAKDGLLKSFKGAKGGFVLIKEPSQYTIKEIVNSAEKKDISVFECSGGTCPNNKEE
                     NCTLMPMLVNLQNKVDEFLDSITLEDIMKNNGKK"
     gene            3624..5798
                     /gene="flhA"
                     /locus_tag="RJ266_001394"
     CDS             3624..5798
                     /gene="flhA"
                     /locus_tag="RJ266_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HDV7355124.1"
                     /translation="MAKNKIVDLVFPFLGPLIAPVLKAKSLTIVGFLVCILAIIIVPL
                     PSPILDFFLALSIALSVLIILISIYIPKPTDLTTFPTLILIITLFRLSLNIATTRMIL
                     SEGQNGPEAVSEIIAAFGEFVVGGNMVIGVIVFCILVLINFMVVTKGSTRVSEVQARF
                     TLDAMPGKQMAIDADLNAGLIDEQTARARRQEVIAEANFYGAMDGSSKFIKGDAVAGI
                     IITIINIIGGFLIGSFQHDMALSDAASTYTILTIGDGLVSQIPGLITSTATAIIITRA
                     SKDEENFAEGTLTQLLSEYRTLLIVGFVLFIFALVPGLPTLSLGFMALVFLSLGYLTK
                     QVKEGKIDITTVKKSKPSAAVASQSGAGGTTAAPAKKSEEEILKEEEHKINDILKVEI
                     LELELGYGLIKLAENELTERIRSMRRSIAESLGFLMPKIRIRDNLRLKPNEYSFKLKG
                     VSIASAEIYPDKYLAMDSGFITEEIEGIATKEPAFNSDALWIDANLKDEATLNGYIVI
                     DPASVISTHMSELIKAHASELLTRQEVQNLLDKVKNDYPIIVEGALGVAPVSLIQKIL
                     KDLLKHHIPIKDMLTILESVSDIAEVSKSFDMIIEHVRASLARMITNMYLDDKGNLDI
                     FILDSASSAVLMENVQFRDGSYHLPLSVAQTGTLVDTLRAEVAAVANGRIKPFILCVE
                     PQLRKFIADICYNFSINIVVLSFAEIAENTNFNTEGIIRIEL"
     gene            5807..6853
                     /locus_tag="RJ266_001395"
     CDS             5807..6853
                     /locus_tag="RJ266_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HDV7355125.1"
                     /translation="MKIYHLSHTDLDGYACQFIVNFYFKNVKFYNSNYGKEINENFNS
                     IIGDIEKDENFGKAIILITDLNLNLNQCEEFEKICKEKNTKIFLLDHHQSGEECAQKY
                     SWYLLDSKRCATKIVYDFFSKICTPVLELSKFVDVVNAVDIWLSEDENFELGKVFLGL
                     IANAKEINRVMFKESQIDYMFFLLDKAWKFIGKENANILLDNATHFIKKDYFARKNDD
                     TLSNLISYFVVEKLSELKENFSIEYEGHKGILTSNIGNTSVIGNDFLVKNPDYDFFID
                     VSSRKTLSFRANGKIDVSLMAKNLVGGGGHKNASGGLFATFKDGANYNYIKAQIIDLI
                     KSKELKKENNESKQ"
     gene            6837..7079
                     /locus_tag="RJ266_001396"
     CDS             6837..7079
                     /locus_tag="RJ266_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355126.1"
                     /translation="MNQNNNKTLKNELEDLQYELSIVLEAMLLYAGVKREKLENAIEA
                     YIDNIDNVLENSNKEGVDEILEVVEFLKNKYKDFFQ"
     gene            7076..>7704
                     /locus_tag="RJ266_001397"
     CDS             7076..>7704
                     /locus_tag="RJ266_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355127.1"
                     /translation="MKKCILIFFSLYSLSFANIYEKLNDFAYEKKPNKDFKIQEVKLV
                     QFSQENKDCLELLIEASQVRILNSYNSCQKLSKDESFQKFLNEDFLKLYKNNGYLINE
                     NLQNLKNTMQDIMIYYKLRYSFSKDVKDMSKNKNLDILNIDEKDGGTLLYKINNQACV
                     GIELTRHDSRMAMKIYGIENLDKECKLFIQSPSFKDLSYTKKDFKWYYL"
BASE COUNT         2882 a          976 c         1321 g         2525 t
ORIGIN      
        1 gagctttttg gtttttcttt ggcctttttt tctaccttgc ttttattttc tgtcttttat
       61 agagagtttg ggtatatttt agaaattgta tatggatttt tttctataat cttagggcgt
      121 acagggagtg gaatttttgc tcttttactt ctactatttt ctttggtttt attgtttcca
      181 aaatttgcaa aagaaatttt aaaaatagaa ttagatttta cttatttatt aaaagtagag
      241 caagctttta aatctttact tatgcgtgta tttggtggag aaaacgagaa agaagatgta
      301 ggtaaatcag aacctatagc tccaaaatta aatattttgc aagatagtat ttatggaaat
      361 ttacaaataa acaaaaaagg ggaaaccaat aacttaggac agataattaa agatagcaat
      421 atcaatgcaa gtaaaaattc aattaccacg gccaaggaaa attttgaaaa actaaaaaat
      481 caaattttag atgaaaccat agagattgat aaacaaagtt taaaagaatc aagaagtttt
      541 gttcatgagc attctcaaca agtgcgaaat ttcgcacaaa aggctagtaa aatgagcatt
      601 agtcttgatg aagattttaa ttttatttca gaagaagagg tagatatgat tcctgaacgt
      661 tttttaaaac ctaaaaaact tgaagatata aagcaaatag atacaaataa aaatttagat
      721 gagccaagtt ataaacgtaa aaatattgaa attccagttt ctaatcaaga agttaaacca
      781 aaaattttta caaaagagct tgaacttaga gagaatttga taaaaaaaga aaaactagaa
      841 caagaataca aagcctatca aaatgaaatt ttagaaaata aagtaaaaca agaaattaaa
      901 aaattagaag aatatgatgc gataaattca agcgatatta tagaagggaa taaatatagt
      961 tttaatagcc caaaaacaat taaaacagaa acagaagaat cagacaaaat aaatgaaaat
     1021 aaaaatctag ataaagcaga caatatcttt gaatttgctc ccattgtaga agagttaaat
     1081 catccttata tagaacctac tcctataaaa aatataaatg aaatagttat agaagaaaaa
     1141 aatacactcg attttatcca aaatacagaa actaaaatcg ataatgaaaa aacaaatgat
     1201 caagaaatta aacttcaaaa agcagtttta gccaaagaaa ttgctattaa ccaagcttta
     1261 ttgcgtgaaa tagagcaggg cgaagtagaa aaaccaaaag atttcacctt gccgccatta
     1321 gattttttag ctaatccaaa agaacacaaa caagaaatca atgaaagtga aatagataaa
     1381 aaaatttata atcttcttga aaaattgcgt cgttttaaaa taggcggcga tgttataagc
     1441 acttatgttg gtcctgtggt aactactttt gaatttcgtc ctagtgcaga tgtgaaagta
     1501 agtcgtattt taaatttaca agatgattta actatggctt taatggcaaa atcaatccgt
     1561 attcaagctc caataccagg aaaagatgtt gtaggtatag aagttccaaa tgatgaaatt
     1621 caaaccattt atttaagaga aattttacaa agtgaagttt ttaaaaacgc taaaagtcct
     1681 ttaaccatag ctttaggtaa agatatagta ggcaatgctt ttgtaaccga tcttaaaaaa
     1741 cttccgcatt tactcatcgc aggaacgaca ggtagtggta aaagtgtggg gataaattct
     1801 atgcttttaa gtcttttata tcgcaactct ccaaaaacct tgcgtttgat gatgatagat
     1861 cctaagatgc ttgaatttag catttataat gacattcctc atcttttaac tcctgttatc
     1921 acagatccaa aaaaagcagt caatgcgctt tcaaatatgg tagctgaaat ggaaagacgc
     1981 tatcgcttaa tggctgatgc aaaaaccaaa aatatagaaa attacaatga aaaaatgaaa
     2041 gaattaggcg gagaagaact tccttttatt gtagtaatta tcgatgaact tgctgatttg
     2101 atgatgactg cgggtaaaga tgtagaattt tatataggaa gacttgcgca aatggcaaga
     2161 gcaagtggaa tccacttgat tgtagctaca caacgacctt ctgttgatgt tgtaacagga
     2221 ctaattaaag cgaatttacc aagtagaatt tcttataaag tagggcaaaa aattgactct
     2281 aaagttattt tagatgctat gggtgctgaa agtttacttg gaagagggga ttgtttattt
     2341 actcctcctg gaacaagctc tatagtgcgt ttgcatgcgc cttttgcaag cgaatttgaa
     2401 atagaaaaaa tcgtggattt tctaaaggat caacaaagcg tagaatatga tgaaagcttt
     2461 ttaaaggatc agcaaagcgt aggtgttaca acaaatgaaa gctttgatgg ggaagtagat
     2521 gagctttatg aagaagctaa aagagtaatc ttagaagatg gaaaaacaag catttcttat
     2581 ttacaacgcc gtttaaaaat cggctataac cgctctgcaa atattattga acaacttacg
     2641 caaaacggga ttttaagcga acctgatgcc aaaggacaaa gggaaatctt gtaagatttt
     2701 tcttgtgttt ttgatatata aaactgatta caaaagaaga aatttaaaag gcaaaagccc
     2761 cgtaaaaagg gcttaaaaat tatttatctc taagatttaa ttcagtaatt aacttactat
     2821 aagaattata atcttttctt ttaagataag ataaaagtct ttttctttga cctacaagtt
     2881 ttagaagtcc taatcttgat gaaaagtctt ttttgtagat ttttaaatgt tctgtaagtt
     2941 ctgcaattct tgcagttaaa agagctactt gaacttctgt tgaaccagta tcacctggtt
     3001 ttttagcgaa tttcgcaact atttctgctt ttttggccga atccaaagcc atgatagacc
     3061 tcctgattgg taaaataata aaattaaaga actgtaattt tatcttaaaa agcaaaaaat
     3121 aaactgaatt tatctttttt agaaggtttt gtcaaaattt aagtcttttt ctaagaatta
     3181 tttattataa ttacagctat ttctgtagtt ataacaagga gaatctgtgc tatttaccaa
     3241 agctagcgaa tacgctttac tttctttaat ttatatttct caaaaagaaa cacctcaaga
     3301 tgtagattct ttagctttag agcttgatat tcctaaaagt tttttagcta aaattttaca
     3361 aactttagct aaagatggct tgttaaaatc ctttaaaggg gcaaaaggtg gttttgtttt
     3421 aatcaaagaa ccaagtcaat atactataaa agaaattgtt aatagtgctg aaaaaaagga
     3481 tatcagtgta tttgaatgca gtggtggcac ttgtccaaat aataaagaag aaaattgcac
     3541 cttaatgcct atgttagtaa atttacaaaa taaagtagat gaatttttag attctattac
     3601 tttagaagat attatgaaaa ataatggcaa aaaataaaat agtcgattta gtttttcctt
     3661 tcttggggcc tttaatcgct cctgttttaa aagctaaaag cttgactatt gttggttttt
     3721 tagtttgtat tttagctatt attatagttc ctttaccaag tcctattttg gactttttct
     3781 tggctttaag tatagcttta tcggtattaa ttattttaat ttctatttat atacccaaac
     3841 cgacagattt aacaactttt ccaactttaa tcttgattat cactttattt aggctttcat
     3901 taaatatagc taccacaagg atgattttaa gcgaagggca aaacggccct gaagctgtga
     3961 gtgagattat agcagcattt ggagaatttg ttgttggtgg aaatatggtc attggcgtga
     4021 ttgtattttg tattttagta ttgattaatt tcatggttgt aacaaaaggt agtacaaggg
     4081 tttctgaagt acaagcaaga tttacacttg atgcgatgcc gggtaaacaa atggctattg
     4141 atgcggattt aaatgcagga cttattgatg aacaaaccgc tagagcaaga cgtcaagaag
     4201 ttattgctga ggcaaacttc tatggtgcaa tggatggttc ttctaaattt atcaaaggag
     4261 atgctgttgc aggaattatc ataactatta taaatatcat aggtggtttt ttaataggat
     4321 cttttcagca cgatatggct ttaagcgatg ctgcatctac ttatactatt ttaaccatag
     4381 gtgatggact tgtatctcaa attccagggc ttattacttc tactgcaacc gctataatta
     4441 tcactcgtgc aagcaaagat gaggaaaatt ttgcagaagg aactttaact caacttttaa
     4501 gcgaatatcg cacgctttta atagtaggtt ttgtactttt tatctttgcg ttagtgcctg
     4561 gtttgccaac tttatccttg ggctttatgg ctttagtatt tttaagcctt ggctatctta
     4621 ccaagcaggt taaggaaggt aaaattgata taactacagt taaaaaaagc aaaccaagtg
     4681 ccgcagttgc atctcaaagt ggagcaggtg ggacaacggc agcgcctgct aagaaaagcg
     4741 aagaagaaat tctcaaagaa gaagagcaca agattaacga tatactcaaa gttgaaattt
     4801 tagaacttga acttggatac ggacttatta agcttgctga aaacgaactt acagaaagaa
     4861 ttcgctcaat gagaagaagt attgctgaaa gtttaggatt tttaatgcca aaaataagaa
     4921 taagagataa tttaagactt aaaccaaatg agtatagttt taaactcaag ggcgtgtcta
     4981 tagcaagtgc tgaaatttat ccggataaat atttagccat ggatagtggt tttatcacag
     5041 aagagataga agggattgct acaaaagaac ccgcttttaa ctctgatgca ctttggattg
     5101 atgcgaattt aaaagatgaa gcaacattaa atggctatat agtaatagat cctgcaagtg
     5161 ttatttcaac acatatgagc gaacttatca aagcgcacgc aagcgaactt ctcacacgcc
     5221 aagaggtaca aaatcttctt gataaggtta aaaatgatta tccaatcatc gtagaaggtg
     5281 ctttaggtgt tgcacctgta agtcttattc aaaaaattct caaagacttg cttaagcatc
     5341 acataccaat taaagatatg cttactattt tagaatctgt aagcgatata gcagaagtaa
     5401 gcaagagttt tgatatgatt attgaacatg taagggcgtc cttagctagg atgattacaa
     5461 atatgtattt agatgataaa ggaaatttgg atatttttat cttagactct gctagttctg
     5521 cggttttaat ggaaaatgta caatttagag atggaagtta tcacttgcct ttaagtgtag
     5581 ctcaaacagg tactttagta gatactctaa gggctgaagt tgccgcagta gcaaatggtc
     5641 gtatcaagcc ttttatactt tgcgttgaac cgcagcttag aaaattcatt gctgatattt
     5701 gttataattt tagcattaat atagtagtgt taagttttgc agaaattgca gaaaatacaa
     5761 attttaatac cgagggtatt attaggatag aactttaagg aatataatga aaatttatca
     5821 tctttcacat acagatcttg atggctatgc ttgtcaattt atagtaaatt tttattttaa
     5881 aaatgtgaaa ttttataatt ctaattatgg caaagaaatt aatgaaaatt ttaactctat
     5941 tataggcgat atagaaaaag atgaaaattt cggaaaagct attattctaa taacagattt
     6001 aaatttaaat ttaaatcaat gcgaagaatt tgaaaaaatt tgcaaagaga aaaatactaa
     6061 aatttttctt cttgatcatc atcaaagtgg cgaagaatgt gctcaaaaat attcttggta
     6121 tttacttgat tctaaaagat gtgcaactaa aatcgtttat gattttttct ctaaaatctg
     6181 tactcctgtt ttagaacttt caaaatttgt tgatgtggtt aatgctgttg atatttggct
     6241 aagcgaggat gaaaattttg aacttggaaa ggttttttta ggcttgattg ccaatgcaaa
     6301 agaaataaat cgtgtaatgt ttaaagaatc tcaaattgat tatatgtttt tcttgcttga
     6361 taaggcttgg aaatttatag gaaaagaaaa tgcaaatatt ttactcgata atgctactca
     6421 ttttataaaa aaggattatt ttgccagaaa aaatgatgat actctttcta atttaatttc
     6481 ttattttgta gttgaaaaac taagtgagct aaaagaaaat ttcagcatag aatatgaagg
     6541 ccataaaggc atcttaactt caaatatagg caatacttct gttattggaa atgatttttt
     6601 agtaaaaaat cctgattatg acttttttat tgatgttagt tctagaaaaa ccttaagttt
     6661 tcgtgcaaat ggaaaaatag atgtaagttt aatggctaaa aatttagtag gtggtggcgg
     6721 acataaaaat gctagtggtg gactttttgc gacatttaaa gatggagcaa attataatta
     6781 tattaaggct caaattattg atttaattaa aagcaaagaa cttaaaaagg aaaacaatga
     6841 atcaaaacaa taataaaacc ttaaaaaatg aattagaaga tttacaatat gagcttagca
     6901 tagttttaga agctatgctt ttatacgctg gagttaaaag agaaaaatta gaaaatgcaa
     6961 tagaagctta tattgataat atagataatg tactcgaaaa ttccaacaaa gaaggggttg
     7021 atgaaatttt agaagtggtg gaatttctaa aaaataaata caaagatttt tttcaatgaa
     7081 aaagtgtatt ttaatttttt ttagtttata ttctttaagt tttgctaata tttatgaaaa
     7141 attaaatgat tttgcttatg aaaaaaaacc gaataaagat tttaagattc aagaagttaa
     7201 attagtacaa ttttcacaag aaaataaaga ttgccttgaa cttttaatag aagccagtca
     7261 agttagaatt ttaaatagct ataattcttg tcaaaaatta tctaaagatg aaagttttca
     7321 aaaatttctt aatgaagatt ttttaaaact ttataaaaat aatggatatt tgattaatga
     7381 aaatttacaa aatttgaaaa ataccatgca ggatattatg atatattata aactccgata
     7441 ttcttttagt aaagatgtaa aagatatgag taaaaataag aatttggata ttttaaatat
     7501 agatgaaaaa gatggtggca ctttacttta caaaatcaac aatcaagctt gtgttggaat
     7561 agaacttaca agacatgact caagaatggc tatgaaaata tacgggatag aaaatttgga
     7621 taaagagtgc aaactattta tccaatcacc ttcttttaaa gatctttcct acacaaaaaa
     7681 ggattttaag tggtattatt taga
//
LOCUS       DAPIWB010000065         7480 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.066, whole genome shotgun sequence.
ACCESSION   DAPIWB010000065 DAPIWB010000000
VERSION     DAPIWB010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7480)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7480)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7480
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.066"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(33..1283)
                     /locus_tag="RJ266_001398"
     CDS             complement(33..1283)
                     /locus_tag="RJ266_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HDV7355128.1"
                     /translation="MLKQKITQAPKTKISQTLRSWLPILQANIEDLKENLDKFAEDNP
                     FLNVQDSIQTHDKGKNYFDSFYKHNVNSAFVDSKGLAKKSVYELLNEQILPPLFPTSK
                     SQELAKKIIECLNEEGYFEHDEEFLKEYSLEEIERVRARFKFLDPVGVGAKDYKEAFL
                     FALENMELDEDIDEFCRMLIMDFENIQNYTKEPLYKEALAVLKRFSTPPFLEYFEDSR
                     IIVPDIFVYKENGEIKVKINDDYYPEISIQTDGLEHDFLSHYIKEAKNLVDALAMRKA
                     TLYKIGLMIVEYQYDFFMGKEIKPMTFKDLALDLERNASTISRAVANKYLSCERGLIP
                     LRDFFAFALDEEGETSNVGVKEFVANLVKNEDRNKPLSDSKILELIKEEFKVDIGRRT
                     ITKYRKHLNIASSTDRKKLYELEG"
     gene            complement(1283..2011)
                     /gene="lptB"
                     /locus_tag="RJ266_001399"
     CDS             complement(1283..2011)
                     /gene="lptB"
                     /locus_tag="RJ266_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HDV7355129.1"
                     /translation="MSKLEIVNLEKIIKKTKIIHGISLEVNSGEVVGLLGPNGAGKTT
                     TFYMICGLISPSSGKVLLDGLDVTKDPLNKRARSGIGYLPQESSIFKDLSVEDNLLLA
                     AQIFYKDKKILHDKVEQMLELLSIEPIRLRKGLSLSGGERRRCEIARSLMCEPKFLLL
                     DEPFAGVDPIAVAEIQTLIKELKRLGIGVLITDHNVRETLAICDRAYVIRSGSLLASG
                     NADEIATNKDVKKYYLGAEFKLLD"
     gene            complement(2004..2411)
                     /gene="tsaE"
                     /locus_tag="RJ266_001400"
     CDS             complement(2004..2411)
                     /gene="tsaE"
                     /locus_tag="RJ266_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HDV7355130.1"
                     /translation="MKEFILAKNEIKTMLQIMPKEGVVLLQGDLASGKTSLVQAWVKF
                     LGLDARVDSPTFSIMQRYENHDICIYHYDIYQEGLEGLLANGLFENFFEKGLHLVEWG
                     GENLKKTLMKFGISTIQIKISIKDDKRKYEIYE"
     gene            complement(2408..2653)
                     /locus_tag="RJ266_001401"
     CDS             complement(2408..2653)
                     /locus_tag="RJ266_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HDV7355131.1"
                     /translation="MRVDKFLNVVNITKRRAISEDMCKSGVVGINGVIVKASKEVKVG
                     DIITLHFTEYTQKYKVLALPSTKSIPKNAQNEYVVKL"
     gene            2809..4029
                     /locus_tag="RJ266_001402"
     CDS             2809..4029
                     /locus_tag="RJ266_001402"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HDV7355132.1"
                     /translation="MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGE
                     ELEPARKKALSLGIKEENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIARPLI
                     AKTQAQIALQTGADGVSHGATGKGNDQVRFELGYLAFNPDLKIIAPWREWDLNSREKL
                     LAYAQKHGIDISKKKGKSPYSMDANLLHISYEGLVLEDPAHAPEEDMWRWSKSPKDAP
                     NESEIIELDFQKGDLVAINGEKLSPAGLLTKLNELGCKHGIGRLDIVENRYVGMKSRG
                     CYETPGGTILLKAHRALESITLDREAAHLKDELMPKYASLIYNGYWFSPERMMLQALI
                     DESQIHANGRVKLELYKGNVMIIGRESSNDSLFNAAYCTFEEDEVYNQKDAAGFIKLN
                     ALRFIIAGKNGRKF"
     gene            4042..4485
                     /locus_tag="RJ266_001403"
     CDS             4042..4485
                     /locus_tag="RJ266_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HDV7355133.1"
                     /translation="MKVLLIKDVKALGKAGEIKEVKDGYGQNFLIAKGFAKAATNEVL
                     RKYESDKKKEAENLRFEIANLEKLKEELSKITLEISKPVGANGSLFGGVTKDEIAHAL
                     KEQSHIEIDKKSLECDTLKSLGIHEVSVKLGHAIHAKFNINIKAE"
     gene            4485..5027
                     /gene="hslV"
                     /locus_tag="RJ266_001404"
     CDS             4485..5027
                     /gene="hslV"
                     /locus_tag="RJ266_001404"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HDV7355134.1"
                     /translation="MFHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNG
                     KVLAGFAGSTADAFNLFDMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVL
                     DRNHIFLLSGTGDVVEPEDGQIAAIGSGGNYALSAARALAKHANLDEEELVKSSLQIA
                     GEICIYTNTNIKTYVIEDEK"
     gene            5024..6343
                     /gene="hslU"
                     /locus_tag="RJ266_001405"
     CDS             5024..6343
                     /gene="hslU"
                     /locus_tag="RJ266_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HDV7355135.1"
                     /translation="MNLTPKEIVKFLDDYVIGQKKAKKIIAIALRNRYRRMQLSPELQ
                     DDIVPKNILMIGSTGVGKTEIARRLAKMMGFPFIKIEASKYTEVGFVGRDVESMVRDL
                     ANAALNLVKNEQREKNKDKIDEFIENKILEKLLPPLPKGISDEKQEEYKNSLEKMRTK
                     LRNGDLDESTIEIEISQNMFDTNPNLPPEMGAMQDIVKVIGVGSKKVKKEMKIKDAKN
                     ALKNEAGEKILDQESIKSEALKRAENEGIIFIDEIDKIAVSSGNSNRQDPSKEGVQRD
                     LLPIVEGSSVQTKIGTLKTDHILFIAAGAFHLSKPSDLIPELQGRFPLRVELDSLDDK
                     ALYEILTRPKNSLLKQYSQLLKTENLELEFDDEAIKEIAKIASRANEEMQDIGARRLH
                     TVIEKLLEDLSFEADEYAGKKFVVDKKIVEEKLGDIIENKDLARYIL"
     gene            6340..7215
                     /gene="era"
                     /locus_tag="RJ266_001406"
     CDS             6340..7215
                     /gene="era"
                     /locus_tag="RJ266_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HDV7355136.1"
                     /translation="MKSGFVSIIGRTNAGKSTLINSLLEEKIALVSHKQNATRRKIKA
                     IVMHEKNQIIFIDTPGLHESGATLNQLLVQSAIKSMGDCDVILFVASVFDSTKDYENF
                     LSLNPQVPHIIALNKVDLTDNATLLKKLSEYAKFSQHFKAIIPYSSKKKSYKKGLLDE
                     IVKYLDEHEYFYDPEFLSASSEKELYRDFILESIYENLSDELPYSSEVLINRTKDTPN
                     LLILEANIITDTNSHKGMLIGKEGATLKRIGKDARFKISKLAQKKVLLKLFVTVKKNW
                     QKDEEFLKKLLNDEN"
     gene            7202..>7480
                     /locus_tag="RJ266_001407"
     CDS             7202..>7480
                     /locus_tag="RJ266_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355137.1"
                     /translation="MMKINSLNKINFIKSTDLLYAQRTGISKEDELFNNLTADFKLSK
                     PFDYQIAFFKHNEIYHCFLAPVYKLKKSRFCFPEPLIFQALFDERFIKE"
BASE COUNT         2756 a         1245 c         1178 g         2301 t
ORIGIN      
        1 aagtgtaatg ggtttgatag attgatagaa ttttatcctt caagttcata taattttttt
       61 ctatctgtag aacttgctat attaagatgt ttgcgatatt ttgtaatagt tcttcgccct
      121 atatcgactt taaattcttc tttgattaat tctaaaattt tactatcact taaaggttta
      181 tttcgatctt cattctttac caaatttgct acaaattctt taacacctac atttgaagtc
      241 tctccctctt catcaagagc aaaagcaaaa aaatcacgca aggggataag tcctctttca
      301 caacttaaat atttatttgc cacagctctt gatatagtcg aagcattgcg ttctaaatca
      361 agtgctaaat ccttaaaagt cataggtttt atctcttttc ccataaaaaa atcatattga
      421 tattctacta tcataagccc tattttataa agagtagctt ttctcatcgc tagagcatcg
      481 actaaatttt ttgcttcttt gatgtaatga cttaaaaaat catgctctaa accatcagtt
      541 tggattgaaa tttcaggata ataatcatca ttgattttta ctttaatttc accattttct
      601 ttataaacaa aaatatcagg aacaattata cgagaatctt caaaatattc caaaaaagga
      661 ggagtgctaa aacgcttaag tacagccaat gcttctttat ataaaggctc tttggtatag
      721 ttttgtatat tttcaaaatc cataatcaac attctacaaa actcatcaat atcttcatct
      781 aactccatat tttcaagagc aaataaaaat gcttctttat aatctttagc tcccactcct
      841 acaggatcta aaaatttaaa tcttgctctt actcgctcaa tttcttccaa agaatactct
      901 tttaaaaatt cttcatcgtg ttcaaaatat ccttcctcat ttaagcattc tataattttt
      961 tttgcaagtt cttgagattt gcttgtagga aacaaaggag gaagaatctg ttcatttaaa
     1021 agctcataaa cacttttttt ggcaagtcct ttactatcca caaaagccga atttacatta
     1081 tgtttataaa atgaatcaaa ataattctta cccttatcat gagtttgtat cgaatcttga
     1141 acatttaaga aaggattatc ctcagcaaat ttatctaaat tttcttttaa atcctctata
     1201 tttgcttgta aaatcggcaa ccaagagcgt aaagtttgag aaattttagt cttaggtgct
     1261 tgggtgattt tttgctttaa catcaatcaa ggagtttaaa ctccgctcct aaataatact
     1321 ttttcacgtc tttattggtt gcaatttcat cagcattccc actagcaagc aaagagcccg
     1381 atcttataac ataagctcta tcacaaatag ccaaagtctc acgcacatta tgatcggtaa
     1441 ttaaaacccc aatccccaat cttttaagct ctttaattaa agtttgaatt tcagccactg
     1501 ctataggatc aacacctgca aaaggctcat caagaagcaa aaacttaggt tcacacatca
     1561 agcttctagc gatctcacaa cgccttcttt cacctccact taaacttaaa cctttcctta
     1621 aacgaatagg ctctatactt aagagttcaa gcatttgctc aactttatca tgtaaaattt
     1681 ttttatcttt ataaaaaatc tgagccgcta aaagcaggtt atcttctaca cttaaatcct
     1741 taaaaatact actttcttga ggtaaataac ctatccctga tctagctctt ttgtttaaag
     1801 gatcttttgt cacatctaaa ccgtctaaaa gaacttttcc actacttggg gaaataagtc
     1861 cacatatcat ataaaaagtt gtcgtttttc ctgcaccatt tggccctaaa agtcctacaa
     1921 cttctccgct attaacctct aaagaaattc catgtataat cttagttttt ttaataattt
     1981 tttctaaatt tacaatttct aatttactca taaatttcat actttctttt gtcatcttta
     2041 atgctaattt taatctggat agtagaaatt ccaaatttca ttaaagtttt tttcaaattt
     2101 tcaccgcccc attcaaccaa atgcaaacct ttttcaaaaa aattttcaaa taaaccattc
     2161 gctaaaagtc cttctaaacc ttcttgataa atatcataat gataaatgca aatatcatga
     2221 ttttcatatc tttgcataat ggaaaaagtt ggagaatcca cccttgcatc aagaccaaga
     2281 aatttaaccc aagcttgcac taagcttgtt tttccgctag ccaaatctcc ttgaagcaaa
     2341 acaacacctt ctttaggcat tatttgaagc atcgttttga tctcattttt tgctaaaata
     2401 aattctttca taattttacc acatattcat tttgtgcgtt tttaggaatg cttttcgtac
     2461 taggtagagc tagcacttta tatttttgag tgtattcagt aaaatgtaaa gtgataatat
     2521 cacctacctt aacctcttta ctcgccttaa caataacgcc attaatcccc actacaccac
     2581 ttttacacat atcttcagaa atagctcttc ttttcgtgat attaactaca tttaaaaatt
     2641 tatctactct cataaaagca attttagcaa aaaaaatcaa tttttggaac aaaatttgct
     2701 tacgcctttg ctttattttt ttaagaaaat agcaagtaaa aacttttctt taatgaaatt
     2761 tggatacaat tttataattt tcaaatctat tttaacaaag gatatcttat gaaaaatgaa
     2821 gtaaaaaaag tagttttagc gtattctgga gggcttgata cgagcattat tttaaaatgg
     2881 cttcaagatg aatataattg tgaagttgta acttttacag cagatattgg tcaaggtgaa
     2941 gaactcgaac ctgcaagaaa aaaagccctt tctttaggca taaaagaaga aaatattttc
     3001 attaaagatt taagagatga atttgttaaa gattatgtat ttcctatgtt tagagccaat
     3061 gcgatttatg aaggagaata tcttttagga acaagtatag caagaccact tatagcaaaa
     3121 actcaagcac aaatcgccct gcaaacaggt gctgatggag taagtcatgg tgccacaggt
     3181 aaaggaaatg atcaagtgcg ttttgaactt ggttatcttg cttttaatcc cgatttaaaa
     3241 atcatcgctc catggcgtga gtgggattta aacagtcgtg aaaaactcct tgcttatgca
     3301 caaaaacacg gtattgatat ttctaagaaa aaaggaaaat ctccttattc tatggacgca
     3361 aatttacttc atatttctta cgaaggactt gtcttagaag atcctgcaca cgcacctgaa
     3421 gaagatatgt ggagatggag taaaagccca aaagatgctc caaatgaaag tgaaattata
     3481 gaacttgatt tccaaaaagg agatttagta gcgataaatg gagaaaaact aagtcctgca
     3541 ggacttttaa ccaaacttaa cgaactaggc tgcaaacacg gtataggacg ccttgatata
     3601 gtagaaaatc gctatgtagg tatgaaaagc cgtggttgtt acgaaactcc aggcggtacc
     3661 atacttttaa aagcacacag ggcacttgaa agcatcacgc ttgatagaga agcagcacac
     3721 ttaaaagatg aactcatgcc aaaatacgca agtttaattt acaatggcta ttggttctcg
     3781 cctgaaagaa tgatgcttca agccttaatc gatgagtctc aaattcacgc caatggcaga
     3841 gtaaaactcg agctttataa aggcaatgtg atgattatag gacgagaaag ttcgaacgat
     3901 agcttgttta acgcagctta ttgtactttt gaagaagatg aagtgtataa tcaaaaagac
     3961 gcagcaggct ttatcaagct taatgctttg cgttttatca tcgcaggaaa aaatggaaga
     4021 aaattttaat aaaggaataa aatgaaagta ttattaatca aagatgtaaa agcacttgga
     4081 aaagcaggag aaataaaaga agtaaaagac ggctacggac aaaatttctt aatcgctaaa
     4141 ggctttgcta aagcagctac taatgaagtt ttaagaaaat acgaaagcga caagaaaaaa
     4201 gaggctgaaa atttacgctt tgaaatcgca aatttagaaa aactcaaaga agaacttagc
     4261 aaaatcactc ttgaaatttc aaaacccgta ggtgcaaatg gaagtttgtt tggtggtgta
     4321 accaaagatg aaatcgctca cgctctaaaa gaacaaagcc atatagaaat cgataaaaaa
     4381 agtttagaat gcgatacctt aaaaagctta ggaatccacg aagtaagcgt aaaacttgga
     4441 cacgcaatcc atgctaaatt taacataaac ataaaggcag aataatgttt cacgcaacaa
     4501 cgattttagc ttacaaaggt aaaaataaat ccgtaatcgg tggagatgga caagtaagct
     4561 ttggaaatac agtgctaaaa ggcaatgctg taaagattag aaaactcaac aatggcaaag
     4621 ttttagcagg ttttgcagga tcaacagctg atgcttttaa tctttttgat atgtttgaaa
     4681 atctccttca aagttctaaa ggcgatcttt taaaagcagc aattgatttt tctaaagaat
     4741 ggagaaaaga caaataccta agaaaacttg aagccatgat gcttgtactt gatagaaatc
     4801 acatttttct actttctggt acaggcgatg tggtcgaacc tgaagatggg caaatcgcag
     4861 ccataggaag tggtggaaac tatgcacttt cagctgctag agccttagca aaacatgcca
     4921 atttagatga agaagaactt gtaaaatcaa gtcttcaaat cgcaggtgaa atttgcattt
     4981 ataccaatac caatatcaaa acttatgtaa ttgaggatga gaaatgaatc taactccaaa
     5041 agaaattgtt aaatttttag atgattatgt tataggacaa aaaaaagcta aaaaaatcat
     5101 agctatagct ttaagaaatc gctaccgcag aatgcaactt agccctgaat tacaagatga
     5161 tatcgtgcct aaaaatatct tgatgatagg ttctacaggt gtgggaaaaa cagaaatcgc
     5221 taggcgttta gctaaaatga tgggctttcc tttcatcaaa atcgaagcga gtaaatatac
     5281 tgaagtaggt tttgtaggtc gtgatgtaga aagtatggta agagatcttg ccaatgcggc
     5341 tttaaattta gtaaaaaacg aacaaaggga aaaaaacaaa gataaaatcg atgaatttat
     5401 agaaaataaa attttagaaa aacttttgcc acctttacca aagggtatca gcgatgaaaa
     5461 acaagaagaa tataaaaaca gtcttgaaaa aatgagaact aaactaagaa atggcgatct
     5521 tgatgaaagc actatagaga tagaaatttc acaaaatatg ttcgatacca atcctaacct
     5581 acctcctgaa atgggtgcaa tgcaagatat agttaaggtt ataggcgttg gcagtaaaaa
     5641 agtcaaaaaa gaaatgaaaa tcaaagacgc taaaaatgct ttaaaaaacg aagcaggaga
     5701 aaaaatccta gatcaagaaa gtatcaaaag tgaagcctta aaaagagcgg aaaatgaagg
     5761 gattattttt attgatgaaa tcgataaaat cgctgtttca agtggaaatt caaaccgcca
     5821 agatccaagt aaagaagggg tgcaaagaga cttacttcct atagtagaag gttcaagcgt
     5881 gcaaacaaaa ataggtactt taaaaaccga tcatattctt tttatcgctg caggagcttt
     5941 tcatcttagc aaaccaagtg atcttatccc tgaacttcaa ggacgctttc ctttaagagt
     6001 ggaattagat agtcttgatg ataaagctct ttatgaaatt ttaacacgcc ctaaaaattc
     6061 acttttaaaa caatactctc agcttttaaa aactgaaaat ttagaacttg aatttgatga
     6121 tgaagctatt aaagaaatag cgaaaatagc ttcaagagcc aatgaagaaa tgcaagatat
     6181 aggtgctaga cgcttacata ctgtgataga aaaattactt gaagatctaa gctttgaagc
     6241 tgatgagtat gcgggtaaaa aattcgtagt ggataaaaaa atagtagaag aaaaactcgg
     6301 agacatcata gaaaataaag atcttgcaag gtatattttg tgaaaagtgg ctttgttagc
     6361 atcatagggc gtactaatgc aggaaaaagt actttaatca attccttatt agaagaaaaa
     6421 atcgccctag tttctcacaa acaaaacgcc acaaggcgta aaatcaaagc catagtgatg
     6481 catgaaaaaa atcaaatcat tttcatcgat accccaggac ttcacgaaag cggcgctacg
     6541 cttaatcaac tgcttgtcca aagtgctatt aaatccatgg gagattgtga tgtgatttta
     6601 tttgtggcaa gtgtttttga tagtacaaaa gactatgaaa attttcttag tctaaaccca
     6661 caagtaccac atatcatcgc tttaaataaa gtagatttaa ccgacaatgc tacgctttta
     6721 aaaaaactta gcgaatatgc aaaatttagc caacatttta aggctatcat tccttattct
     6781 tctaagaaaa aaagctataa aaaaggcttg ttagatgaga tagtaaaata ccttgatgaa
     6841 catgagtatt tttatgatcc tgaattttta agtgcgagta gcgaaaaaga actttataga
     6901 gatttcatac ttgaaagtat ttatgaaaat ttaagcgatg agcttcctta tagtagcgaa
     6961 gtgcttatca atcgcaccaa agacacacct aatcttttaa tcctagaagc caatatcatc
     7021 acagatacaa actctcacaa gggtatgctt ataggaaaag aaggggcaac tttaaaaaga
     7081 ataggcaaag atgcacgctt taaaatttca aaacttgcac aaaaaaaagt acttttaaag
     7141 cttttcgtaa cagtgaaaaa aaactggcaa aaagatgaag aatttttaaa aaaactttta
     7201 aatgatgaaa attaattcat taaataaaat aaattttata aaatctacag atttgcttta
     7261 tgctcaaaga acaggaatat ccaaagaaga tgaacttttt aacaatttaa ctgcagattt
     7321 taagctaagc aaaccctttg actatcaaat agcttttttt aaacataatg aaatttatca
     7381 ttgtttttta gcacctgttt acaaattgaa aaaaagtcgt ttttgctttc ccgagccttt
     7441 aatttttcaa gctttatttg atgaaagatt tattaaggaa
//
LOCUS       DAPIWB010000066         7440 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.067, whole genome shotgun sequence.
ACCESSION   DAPIWB010000066 DAPIWB010000000
VERSION     DAPIWB010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7440
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.067"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..588)
                     /locus_tag="RJ266_001408"
     CDS             complement(<1..588)
                     /locus_tag="RJ266_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDV7355138.1"
                     /translation="MLKVCNLSKFYELKKHWYLKKERHIIFDNVNFSLNENDNLIILG
                     KSGAGKSTLARILCFLEDPSEGEVWYENLNLHKLDKNKQRLLRKQIQYCFQDQKMALN
                     PYKKIKNLIQDGLENFNLQKNDDLILEFFDFFSLKKQILEQKPYELSGGEATRVGLIR
                     ALVLNPKLLILDEITSAFDIKTSKEILTFLYDYQQK"
     gene            complement(581..1291)
                     /locus_tag="RJ266_001409"
     CDS             complement(581..1291)
                     /locus_tag="RJ266_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7355139.1"
                     /translation="MKVRNLNISLKNNLLLKDINLDIKTGKTLMILGQSGVGKSLLGK
                     ALVRLLDSNFTISFDELSFHNSCIFNFNKEELRNFRSKVALVLQDAELSLYPYLDIGN
                     LCHLVLKTHTKLKQKEIKDYAFSYFQKLGFENLDRLWHSYANELSLGMARRVSLALAL
                     LNQPQILICDEITASLDKENASKIISILKELKNTTALVCITHDLNLVNSLADEILMLE
                     KNSSNLYSLDEFLRYYNA"
     gene            complement(1288..2082)
                     /locus_tag="RJ266_001410"
     CDS             complement(1288..2082)
                     /locus_tag="RJ266_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7355140.1"
                     /translation="MILFKFLIILAPLIFLFLCALFAPFLASFDILSTHLENLHQAPN
                     FTYILGTDFLGRDLFSRLLFALRNSLIIGVGGSLLSIIFALCYLFLARCFFYVFWMRI
                     LEFFLALPAFLLMMFFQSMITSDVFLMIFLIALIHWCFIARIIESELKRLENLDFYKA
                     NIVLGRTKFRAFLKDLIPALKTLIFTLFIFNIVHAIATEATLSFFGLGLGFEIPTLGT
                     LLSESSKAVFIGAWWMILFPLLSLLLLFLPLLWLGNFLQKIWGIRS"
     gene            complement(2069..3013)
                     /locus_tag="RJ266_001411"
     CDS             complement(2069..3013)
                     /locus_tag="RJ266_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7355141.1"
                     /translation="MLKRLVFSIFIAFFSTFLCFVLLHFSKGSIAYANGVNSQSKEFV
                     QRIEQNLGLDKPLLEQYKIWLFKALKGDLRVSFLSGESVLKLIKERIFNTFILGFSAL
                     MLLFLLSVFLALLGYYYKESFIDKIITFLAFNFFALPPFVLALLFVLIFGIFWKILPV
                     MGSSDIGFEDDFLNRLEHLILPVLVLVLSHLALFLRIARNFINESFSQIFIQNLYARA
                     LREKDIYFLVLKYSLSPIVAYFGGSALSFMMGTYVVESVFAYKGLGSLLFKSIIFKDY
                     PIVLALIFFSVLLAAFFTFLSDIVARILNPRLRRLDFV"
     gene            complement(3013..4548)
                     /locus_tag="RJ266_001412"
     CDS             complement(3013..4548)
                     /locus_tag="RJ266_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDV7355142.1"
                     /translation="MLRWFVLLFLLFLNLEAKIPKDTLIIAVENEIARINPAYSEDHD
                     AVINLVFSGLTRFDENMSLKPDLAKSWDISKDGLVYDIFLRDDVLWHDGVKFSADDVK
                     FSIEAFKNPKNNSSIYVNFEDIKSVEILNPSHVKITLFKPYPAFLDALSIGMLPKHLL
                     ENENLNTSSFNQNPIGTGPYKFVKWKKGEYVEFKANEHFYLDKVKTPRLIIKHIFDPS
                     IASAELKNGKIDAALIDVSLLNIFKNDENFGILREKSADYRALMFNLDNEFLKDLKVR
                     QALNYAVDKESIVKNLLHDYAFVANHPLERSWANSKNFKIYKYDPKKAEDLLVSAGFK
                     KNKDGNFEKDGKILEFEIWAMSNDPLRVSLAGILQSEFRKIGVVSKVVAKPAGSFDYS
                     KVDSFLIGWGSPLDPDFHTFRVFESSQDSALNDEGWNFGHYHDKKVDIALQKARNTSN
                     LEERKKYYKDFIDALYENPPFIFLAYLDFALVYNKDLKGIKTRTLGHHGVGFTWNVYE
                     WSK"
     gene            complement(4658..7429)
                     /locus_tag="RJ266_001413"
     CDS             complement(4658..7429)
                     /locus_tag="RJ266_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HDV7355143.1"
                     /translation="MANFKAFYNEAKYIFKDRIFNDYARCYAYGIDASCYFYIPKIVI
                     IAKNEDEIKQIIQLANTYKTPITFRAAGTSLSGQSSCDGVLVVIKFAFKKIKINKDAN
                     EITLGCGVVGIHANESLAFLKKKIGPDPATINSALIGGIINNNSSGMCCGTKDNSYKT
                     LRSIRVILANGSMLDTSDALSVARFKDENKKLINELREIKEEINANKELKDLIIKKFK
                     IKNTTGYSLNAFVDYDDEIDILAHLLIGSEGTLGFVSEVKLAVLDDLEFKACALLFFD
                     NINNAANTIKEFAKVDFVSSAEIMDYASLKAASTYDELRDILADIKEGNTCVLIQSEH
                     SNELKLDENINKIKEISKLAYKSYFSKNKAEYDLWWKIRKALLPIAASLRKAGSTVIT
                     EDVCFNIEDLADGIKSIQELFYKYGFGDNGIIFGHALAGNIHFIITPDLNNKLEFDNF
                     SNLVKEMSNIVASYGGSIKAEHGTGRMVAPFVEVEWGKQAYLINKKIKSIFDKDGLFN
                     PDVIISDDKDIYKKNIKQVSWIDEKLNTCMECGFCERFCPSNEYTITPRQRIAILREI
                     KRLESLNDDESKAKLKDIKKYYNHLVDSSCAACGVCSFSCPLGINFADFSLKYRKNNI
                     GFISKILGNLAYKNHEKTLKIAKFSLSIANKFDNLSLDNKLEKASNFLSIIPRTRAYL
                     PKVNDYELKSHKRVCNVVYFTSCLNKSFKPNEKMHDKRSLQEVFESLCKKANIGIIYA
                     PNDLCCGKAYENFQDIQDKNIQKINDFLSNIDSPIVLDHSACSAKLISDHSKYEIYDL
                     SEYLLKFIAPKLRIDKINENVGLYIMCAARKLGLNENIIKLTKLCTNGKVLIDNDTYC
                     CGFAGYKGFFKPQLNISATKGFKKFYAKTNIKRGFSTSSTCEIGLSDATGISWQHIAY
                     LLDECSEAI"
BASE COUNT         2746 a         1343 c          825 g         2526 t
ORIGIN      
        1 tttttgctga tagtcatata aaaaagttaa aatttcttta gaagttttaa tatcaaacgc
       61 tgaagtaatt tcatctaaaa tcaacaattt aggatttaaa accaaagcac ggataagacc
      121 tacacgtgtg gcttctcctc cgcttaactc atagggtttt tgttctaaaa tttgtttttt
      181 tagactaaaa aaatcaaaaa attctaaaat caagtcatca ttcttttgta aattaaaatt
      241 ttccaaacca tcttgtataa gatttttgat ttttttataa gggtttaaag ccattttttg
      301 atcttgaaag caatattgaa tttgctttct taaaagtctt tgtttgtttt tatcaagctt
      361 gtgtaagtta agattttcat accatacctc accctcactt ggatcttcta aaaaacaaag
      421 aattctagct aatgtgcttt tacctgcacc acttttacct aaaattatta aattgtcatt
      481 ttcatttaaa gaaaaattga cattatcaaa aataatatgt ctttcttttt ttaaatacca
      541 atgcttttta agctcataaa acttacttaa attacaaact ttaagcatta taatacctta
      601 aaaactcatc taagctatat aaatttgaac tatttttttc tagcataaga atttcatctg
      661 ctaaagaatt taccaaattt aaatcatgag tgatacaaac taaggctgta gtatttttta
      721 attcttttaa aatcgatata atcttagaag cgttttcttt atccaaagaa gctgtgattt
      781 catcacaaat taaaatttgg ggttgattta ataatgccaa agctaggctc acccttcttg
      841 ccatacccaa acttaattca ttagcataag aatgccacaa acgatcaaga ttttcaaatc
      901 ctaatttttg aaaataagaa aaagcgtaat cttttatttc tttttgtttt aattttgtat
      961 gagtttttaa aacaagatga cataaatttc caatatccaa ataaggataa agactaagct
     1021 ctgcatcttg caaaacaagt gccactttag aacgaaaatt tctaagctct tctttattaa
     1081 aattaaaaat acaagaatta tgaaaactta attcatcaaa acttattgtg aaattagaat
     1141 ctaaaagtct taccaaagct tttcctaaca aacttttgcc cactccactt tgtcctagta
     1201 tcattaaagt tttgcctgtt tttatatcta aattaatatc cttaagtaat aaattattct
     1261 tcaaactgat atttaaattt cttaccttca agatcttata ccccaaattt tttgtaaaaa
     1321 attacccaac cataaaagag gtaaaaacaa caaaagcaag cttaaaagtg gaaaaagtat
     1381 catccaccaa gcgcctataa aaactgcttt tgaagactca ctcaaaagag tacctaaagt
     1441 tggaatttca aatcctaaac ccagtccaaa aaaactcaaa gtagcttctg tggctatagc
     1501 atgaacgata ttaaatataa aaagtgtaaa aatcagtgtt tttaaagcag gtattaaatc
     1561 tttaagaaaa gctctaaatt tagttcttcc aagcactata tttgctttgt aaaaatctaa
     1621 attttcaagt ctttttaatt cactttctat aattcttgct atgaaacacc aatgaattaa
     1681 agcgattaaa aaaatcatca aaaacacatc agaagttatc atactttgaa aaaacatcat
     1741 aagtaaaaaa gcaggcaagg ctaaaaaaaa ctctaaaata cgcatccaaa aaacataaaa
     1801 aaaacatcgc gctaaaaaca aatagcacaa agcaaagata atagacaata aagatccacc
     1861 aacacctata atcaaagaat ttctcaaagc aaaaagcaaa cgagaaaaca aatctctgcc
     1921 taaaaaatca gtccctaaaa tataagtaaa attaggagct tgatgcaaat tttctaaatg
     1981 agtgcttaaa atatcaaaag aagctaaaaa aggtgcaaac aaggcacata aaaacaaaaa
     2041 aattaaaggc gcaagaatga taagaaattt aaacaaaatc aagccttctt aatctaggat
     2101 ttaaaatcct agctacaata tcacttaaaa atgtaaaaaa tgctgcaagc aaaacactaa
     2161 aaaatataag cgcaagcaca ataggataat ctttaaaaat aatactttta aaaagtaaag
     2221 atccaagccc cttgtaagca aagacacttt ctaccacata agttcccatc ataaaactta
     2281 aagcacttcc cccaaaataa gccacaatag gacttaaaga atatttcaaa actaaaaaat
     2341 aaatatcttt ctcccttaaa gccctagcgt ataaattttg aataaaaatt tgagaaaaac
     2401 tttcattgat aaaatttcta gcaatcctta aaaataacgc caaatgtgat aaaacgagca
     2461 ccaaaacagg caaaatcaaa tgctctaaac gatttaaaaa atcatcttca aagcctatat
     2521 cactacttcc cataacaggc aaaattttcc aaaaaattcc aaaaatcaaa acaaacaata
     2581 aagccaaaac aaaaggaggt aaagcaaaaa aattaaaagc taaaaaagtg atgattttat
     2641 ctataaaact ttctttataa taatatccca aaagtgccaa aaaaacactg agcaaaaata
     2701 aaagcattaa ggcactaaaa cccaaaataa aagtattaaa aattctttct tttataagct
     2761 ttaaaacact ttctccactt aaaaaagaaa cccttaagtc cccttttaga gccttaaaaa
     2821 gccaaatttt atactgctct agcaaaggct tatcaagccc taaattttgt tctattcttt
     2881 gaacaaattc tttactttgt gaattaactc cattagcata agctatactg cctttactaa
     2941 aatgaagtaa aacaaaacat aaaaaagtgc taaaaaatgc tatgaaaata ctaaaaacta
     3001 agcgttttag cactatttac tccactcata aacattccaa gtaaaaccca ctccatgatg
     3061 acctaaagtc cttgttttga taccttttaa atctttatta taaactaaag caaaatcaag
     3121 ataggctaag aaaataaaag gaggattttc atacaaagca tctataaaat ctttataata
     3181 tttttttctc tcttctaaat ttgaagtatt tcttgctttt tgcaaggcta tatccacttt
     3241 tttatcatga taatgtccaa aattccaacc ctcatcattt aaagcactat cttgcgaact
     3301 ttcaaatacc ctaaaagtgt gaaaatcagg atctaaagga cttccccagc ctattaaaaa
     3361 actatctact ttagaataat caaaacttcc agcaggttta gccaccacct tgcttacaac
     3421 tcctattttt ctaaattcgc tttgcaaaat tccagctaaa cttaccctta aaggatcatt
     3481 gctcatcgcc caaatttcaa attctaaaat tttcccatct ttttcaaaat ttccatcttt
     3541 atttttctta aaacctgcac tcacaagcaa atcctcggct tttttaggat catatttgta
     3601 aattttaaaa ttcttagaat ttgcccaaga acgctctaaa gggtgattag ctacaaaagc
     3661 ataatcatgt aaaagatttt ttactatact ttctttatcg actgcgtaat ttaaagcttg
     3721 tcttactttt agatctttta aaaattcatt atctaaatta aacattaaag cccgataatc
     3781 agccgatttt tcacgcaaaa ttccaaaatt ttcatcattt ttaaaaatat ttagcaaaga
     3841 aacatcgatt aaagctgcgt ctatcttgcc atttttaagc tcagcactag ctatagaagg
     3901 atcaaaaatg tgttttataa taagtcttgg agtttttacc ttatcaagat aaaaatgttc
     3961 attggcttta aattcaacat attcaccttt tttccatttt acaaatttat aaggacctgt
     4021 acctatagga ttttgattaa aagagcttgt gtttaaattc tcattttcaa gcaaatgttt
     4081 aggaagcatt cctatgctta aagcatctaa aaatgcagga taaggtttaa agagtgtgat
     4141 ttttacatga gaaggattta aaatttccac acttttaatg tcttcaaaat tgacataaat
     4201 agaagaattg tttttaggat ttttaaaggc ttctatacta aatttcacat catcagcact
     4261 aaatttgact ccatcatgcc ataaaacatc atctcttaaa aaaatatcat aaacaagccc
     4321 gtctttacta atatcccaag acttagccaa atcaggtttt aaactcatat tttcatcaaa
     4381 acgcgtaagc cctgaaaata caagattaat cactgcatca tgatcctcgc tataagcagg
     4441 atttatcctt gcgatttcat tttcaactgc tataataagt gtatcttttg gaattttagc
     4501 ctcaagattc aaaaacaata aaaatagtaa aacaaaccat ctaagcactt gtaactcctc
     4561 aaatttaaaa ttttaaagaa ttataaaata aaaaataaga agccacaagc tctatggggg
     4621 gataatttgc tttaaattat ggagttttat ttatcaatta aattgcttca ctgcattcat
     4681 ccaataaata cgctatatgc tgccaagata tacccgtagc atcgcttaat cctatctcgc
     4741 aagtgcttga tgtactaaac ccgcgcttaa tatttgtttt ggcataaaat tttttaaagc
     4801 cttttgtagc actaatattt aattgaggct tgaaaaagcc cttgtatcca gcaaacccac
     4861 aacaataggt atcattatct attaatactt ttccattcgt acatagcttt gtaagcttaa
     4921 ttatattttc atttaaacca agctttctag cagcacacat gatatataat cctacattct
     4981 cattgatttt atcaatgcgt aacttgggag caataaattt taataaatac tcgcttaaat
     5041 cataaatttc gtactttgaa tgatcactaa ttaacttagc actacaagca ctatgatcta
     5101 acactatggg tgagtctata ttgcttaaaa agtcattgat tttttgtata tttttatctt
     5161 gaatatcttg aaaattctca taagccttac cacaacataa atcattgggt gcataaataa
     5221 tgcctatatt tgctttttta cacaagctct caaatacttc ttgcaaactt cttttatcat
     5281 gcattttttc atttggttta aagcttttat taagacagct tgtaaaataa accacattgc
     5341 aaactctttt atgacttttt agctcataat cattcacctt aggcaaatac gccctagttc
     5401 ttggtataat gctaagaaaa ttgcttgctt tttcaagctt attatcaaga cttaaattat
     5461 caaatttatt tgcgatactt aatgaaaatt tagcaatttt tagagttttt tcatgatttt
     5521 tatatgctag atttcctaaa attttagata taaatcctat attatttttt ctatatttta
     5581 atgaaaaatc agcaaaatta atccccaaag gacatgaaaa agagcacacc ccacaagcag
     5641 cacaagagct gtctactaaa tgattgtaat attttttaat atcctttaat tttgcttttg
     5701 actcatcatc atttaagctt tcaaggcgtt taatctctcg taagatcgca attctttgtc
     5761 ttggagtaat tgtatattca tttgatggac aaaatctttc gcaaaatcca cattccatac
     5821 aggtatttaa tttctcatca atccaactga cttgtttgat atttttctta taaatatctt
     5881 tatcatcgct aatgattaca tcgggattaa ataaaccatc cttatcaaag atacttttga
     5941 tttttttatt gatcaaataa gcttgcttac cccactctac ctccacaaaa ggtgccacca
     6001 tacgccctgt gccgtgttca gcttttatac ttccaccata agaagctact atattagaca
     6061 tttctttaac tagatttgaa aaattatcaa attcaagctt attgtttaaa tccggtgtga
     6121 taataaaatg gatattgcct gctaatgcat ggccaaaaat gattccatta tcaccaaagc
     6181 catatttata aaacaattct tgaatgcttt taattccatc ggctaaatcc tcgatattaa
     6241 aacacacatc ttcagtaatt accgttgaac ctgcctttct aagactagct gctataggca
     6301 agagtgcttt tctaatcttc caccataaat catattcggc cttattcttg ctaaaatatg
     6361 acttataagc cagtttggaa atttctttta ttttatttat attttcatca agcttaagct
     6421 cattactatg ctcactttgg atcaatacac aagtattgcc ctctttaata tcagctaaaa
     6481 tatctcttaa ctcatcataa gttgatgcag cttttaaact tgcatagtcc attatttcag
     6541 cagaacttac aaaatcaact ttagcaaatt cttttatagt gtttgcagca ttattgatat
     6601 tatcaaaaaa caataaagca caggccttaa attccaaatc atccaaaaca gcaagcttaa
     6661 cttcgcttac aaatcccaaa gtcccttcag agccaataag caagtgtgct aaaatatcta
     6721 tttcatcatc ataatcaaca aaggcattaa ggctataacc tgtggtgttt ttgattttaa
     6781 attttttgat tattaaatct tttaattctt tattggcatt aatctcttct ttgatctctc
     6841 taagttcatt aattaatttt ttattttcat ctttaaatcg agccacactt aaagcatcgc
     6901 tggtatcaag catactacca tttgccaaaa tcaccctaat acttcttaag gttttatagc
     6961 tattatcctt agttccacag cacattccgc ttgaattgtt atttataatc cctccaatta
     7021 aagctgaatt tatagtagct ggatcaggtc ctattttttt cttcaaaaaa gcaagacttt
     7081 cattagcatg aatgcctact acaccgcatc ctaaagtaat ttcgttagcg tctttgttaa
     7141 tttttatttt tttaaaggca aatttaatca ctacaagcac tccatcacaa gagctttgtc
     7201 cacttaaact tgtacctgct gctctaaatg ttataggagt tttataagta tttgctaatt
     7261 gaataatttg cttaatttca tcttcatttt tagcaataat cactattttt ggaatataaa
     7321 aataacacga cgcatcaatg ccataagcat agcatctagc ataatcatta aaaattctat
     7381 ccttaaaaat atacttagcc tcattataaa aagctttaaa atttgccata gtccctcttt
//
LOCUS       DAPIWB010000067         7403 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.068, whole genome shotgun sequence.
ACCESSION   DAPIWB010000067 DAPIWB010000000
VERSION     DAPIWB010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7403
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.068"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            105..1595
                     /locus_tag="RJ266_001414"
     CDS             105..1595
                     /locus_tag="RJ266_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDV7355144.1"
                     /translation="MLTWMQHHKKYLVVTIWVSTIAFVGAGFLGWGAYDFNLNRSSSV
                     ATVGNEKIGFSEFDTRYRQILSYYNQISNGALTPENAEQLGIKNIALSSLVEDKLLLN
                     FAKDLGIGVNENQILQKLANTREFQDPTGDFNKTIYYELLNANNLAPKDYETQLANEV
                     ITDKLNQIFNIPSKDEELKMLASSYFMQDALSIAKIDYDKKNIKINEEDLKKLWNEHK
                     EDYKTKKIYEISTYFLPVSNEKIDDKELEKFYNQDENKLKYKDFAGKVMDFQSAKNEV
                     AKDYALMQLKNVANAKFLDLKNGKDNFQKDQNISESDVYYPIDLLNKAKNGDVLRPAP
                     YNNGYIIVKLNKVDPIRNKTFEEAREEVLPMYLSEQARKNLEEKAKNSLVNFKGDDIG
                     FVSRDSSRESVKVSDKILNDSEFAYFLMNVFNTDQNSSYVVINDNKAILYKINKQKLD
                     MNSDKFEQYKTMLEQNLQNLKANELKQELVDELKKIYPIKIYYKGN"
     gene            1592..2980
                     /gene="ftsA"
                     /locus_tag="RJ266_001415"
     CDS             1592..2980
                     /gene="ftsA"
                     /locus_tag="RJ266_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HDV7355145.1"
                     /translation="MILNILGIDLGSTQTCAIIAQKDEDGLKIIGFSKSKTNGVKKGA
                     ITNIELASKSIEEAVRSAEMMSGVHYDRVVVSISGAYTKSVDSIGVVNIPNHEIGIKE
                     IHRAVSTAKHTANLPSGYEIIHVLPYNFKVNDLEHVDDPLGMSGNRLEVSTHIVISQE
                     SHIKNLKKAVELADLRVDNIVLSGYASAIACLDDSEKELGAVLIDMGGAICDMVVHTG
                     NSIRYNDCLQIGSINITQDLSMALHTPLKEAEKIKLNYAALSQQPNTLIQIPSMGDER
                     KVNEVSLDIISNVIYARAEETLMILAKILSDNRYANAIGGGVVLTGGMTKLAGIDELA
                     PATFDNRSVRLATARKDLITGFSEIFNDPENTCAIGLCLYGAGYFTPYELDSNEKLRY
                     KGEIENFNRQIKQDIVLQKDTESEIKSDFFDENLQENDTIAIQEQLDFKEPKEKKPSV
                     FSNIWHKIMNQF"
     gene            2996..4108
                     /gene="ftsZ"
                     /locus_tag="RJ266_001416"
     CDS             2996..4108
                     /gene="ftsZ"
                     /locus_tag="RJ266_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HDV7355146.1"
                     /translation="MSEFLVEEMQHNKGAKIKVIGCGGGGGNMINHMVKMGLNDLDLI
                     AANTDAQAISISLAKTKIQLGEKKTKGLGAGMLPEVGAESARESFEEIKASLSQSDIV
                     FIASGFGGGTGTGATPVIAQAAKEIGALTVSVVTMPFAFEGKQRKKLAESGLLELKKE
                     SDSILVIQNEKLLSIIDKKAGIKDAFRLVDDILARAVKGMVSILLDNGDINVDFADVR
                     TIMSHRGLALMGVGSASGENAIEEALSNAIESPLLDGMDIKGAKGVILHFKTSSNCSL
                     FEISAAANSIQEIVDENAKIIFGSTTDDSMEDRVEVTIIATGFEDKDTVAKKSTEEAQ
                     ASKKNPYLSLKKVSGGYDEEIMAQIETPTFLRRQMD"
     gene            4264..5076
                     /locus_tag="RJ266_001417"
     CDS             4264..5076
                     /locus_tag="RJ266_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body protein"
                     /protein_id="HDV7355147.1"
                     /translation="MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADF
                     KRIFKETQDELPIENHTRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMT
                     REDAFYLVQTKDGEVRLTKDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNG
                     AVQISVDKNGSIEVDGAQNARLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAI
                     RQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTAHMDDLNQEAINKLAAVK"
     gene            5105..5896
                     /gene="flgG"
                     /locus_tag="RJ266_001418"
     CDS             5105..5896
                     /gene="flgG"
                     /locus_tag="RJ266_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HDV7355148.1"
                     /translation="MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFADL
                     MYQVMKYAGTSTSATTLSPSGIEVGVGVRPTAVTKVFTEGNLKSTSTDGLDMAIAGNG
                     FFQIQLPDGTIGYTRNGQFTKDNEGNIVNSDGYRLLPEMTIPEGTTAINVATDGTVSV
                     MLPGEQQETQIGQVELVQFINPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHG
                     FIELSNVQLVEEMTDLITGQRAYEAGSKAITTSDDMLGIVNQLKR"
     gene            complement(5963..7393)
                     /gene="glnA"
                     /locus_tag="RJ266_001419"
     CDS             complement(5963..7393)
                     /gene="glnA"
                     /locus_tag="RJ266_001419"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HDV7355149.1"
                     /translation="MGKFVNNIDDFFKFCKQNEVLFVDFRFTDMIGTWHHITYNLHAI
                     NEETFQTGIPFDGSSIHGWQPIEKSDMILKPDAQSAFLDPFTADPTIIVFCDVYDIYK
                     GQMYEKCPRSIAKKAIEHLKNSGIADTAYFGPENEFFVFDSVKIVDTTHCSKYEVDTE
                     EGEWNDDREFTDSYNTGHRPRNKGGYFPVQPIDSLVDIRSEMVQTLEKVGLKTFVHHH
                     EVAQGQAEIGVNFGTLVEAADNVQIYKYVVKMVAHLNGKTATFMPKPLYGDNGNGMHV
                     HMSLWKNGVNLFYDKDGYSGLSQTAINYIGGILKNARSVAAFTNPSSNSYKRIVPGFE
                     APCILTYSCQNRSASCRVPYGIGKNSARIEIRFPDSTANPYLAFVSLLMAGLDGIKNK
                     TIPVGPMDENLFDLTLDEIREKGIEQLPHTLRGSLEALIRHNSYLKPVMSDIFIDDYQ
                     HLKFETQVWPVEARPTAYEFKTCYSC"
BASE COUNT         2644 a         1007 c         1368 g         2384 t
ORIGIN      
        1 taaaatttaa agaacaaata ttttttggta aaaattttat aattaaactc cacttaaaca
       61 cttctacgat acaatatctg gtttaaattt aatcaaggaa tgatatgctt acttggatgc
      121 aacatcacaa aaaatatctt gttgttacta tatgggttag tactatagct tttgttggcg
      181 ctggcttttt aggttggggt gcttatgatt ttaatctcaa tagaagttcg agtgttgcaa
      241 ctgtaggaaa tgaaaagata ggttttagcg aatttgatac tagatataga caaattttaa
      301 gttattataa tcaaattagc aatggtgctt taactccaga aaatgctgag caactaggca
      361 ttaaaaatat agctttaagc tctcttgttg aagataagct tttgttaaat tttgccaaag
      421 atttgggtat tggtgtgaac gagaatcaaa ttttacaaaa acttgcaaat actagagaat
      481 ttcaagatcc tacaggggat tttaacaaaa caatttatta tgaactttta aatgccaata
      541 atttagctcc aaaagattat gaaacacaac ttgcaaatga agtaattacc gataaactta
      601 atcaaatttt taatattcct agcaaagatg aggaattaaa aatgttagct tctagttatt
      661 tcatgcaaga tgctttaagt attgcaaaaa ttgattatga caaaaaaaat attaagatta
      721 acgaagagga tttaaaaaag ctttggaatg aacataaaga agattataaa actaaaaaaa
      781 tatatgaaat ttcaacttat tttttgccag ttagcaatga gaaaattgac gataaagaat
      841 tagaaaaatt ttataatcaa gatgaaaata aactaaaata taaagatttt gcaggtaaag
      901 tgatggattt tcagtctgct aaaaatgaag ttgctaaaga ttacgcctta atgcaactaa
      961 agaatgtggc taatgctaaa tttttagatt taaaaaatgg gaaagataat tttcaaaaag
     1021 atcaaaatat tagtgaatct gatgtttatt atccaattga tcttttgaat aaagctaaaa
     1081 atggagatgt tttacggcca gcaccttata ataacggata tatcatagtt aaactaaata
     1141 aagtagatcc tataagaaat aaaacttttg aagaagctag agaagaagtt ttacctatgt
     1201 atttaagcga acaagctaga aaaaatttag aagaaaaagc taaaaatagt ttagtaaatt
     1261 ttaaaggcga tgatataggc tttgtaagtc gagatagttc tcgcgagagt gtaaaggtta
     1321 gcgataaaat attaaacgat tctgaatttg cttatttttt aatgaatgta tttaatactg
     1381 atcaaaatag ttcttatgtg gtcattaatg acaataaagc aatattatat aaaataaata
     1441 aacaaaaatt agatatgaac tccgataaat ttgaacaata caaaactatg cttgaacaaa
     1501 atttgcaaaa tttaaaagca aatgagctta agcaagaact tgttgatgaa cttaaaaaga
     1561 tatatccgat aaaaatttat tataaaggga attgattttg aatatattag gaattgactt
     1621 aggctcaacc cagacttgtg ccattattgc tcaaaaagat gaagatggat taaaaattat
     1681 tggtttttcc aagtcgaaaa ccaacggggt taaaaaaggt gccattacca atatagagct
     1741 tgcttctaaa tctattgaag aggctgttag aagtgctgag atgatgagcg gagttcatta
     1801 tgatagggtt gtggtgtcta tatcaggtgc ttatactaaa agcgttgata gcataggtgt
     1861 tgttaatatt ccaaatcatg aaataggcat taaagaaatt catcgtgctg taagtacagc
     1921 taagcatact gccaatctac caagtggtta tgaaattatc catgttttgc cttataattt
     1981 taaggttaat gatcttgaac atgtcgatga tcctttggga atgagtggta atcgtttaga
     2041 agtttcaacc catatagtga tttcacaaga atctcatatt aaaaatctta agaaagcagt
     2101 tgaattagct gatttaagag tggataatat agttctttca ggatatgctt cagctatagc
     2161 ttgtttagat gatagcgaaa aggaattagg tgctgttttg attgatatgg gtggagcgat
     2221 ttgtgatatg gttgttcata ctggaaattc aattagatat aatgattgtt tgcaaattgg
     2281 ctcgattaat atcactcaag atttatcaat ggcattgcat acacctttaa aagaagcaga
     2341 aaaaatcaag cttaattatg cagctctttc acaacagcct aataccctta tacaaattcc
     2401 ttcaatgggt gatgaaagaa aggttaatga agtttctttg gatattattt caaacgtaat
     2461 ttatgcaaga gcggaagaaa ctttgatgat tttggcaaaa atcttaagtg ataatcgtta
     2521 tgccaatgct ataggtggcg gagttgtttt aacaggtgga atgactaagt tagcaggtat
     2581 tgatgagcta gctcctgcaa catttgataa tcgctcagtt agactggcta ctgcaagaaa
     2641 agatttgatt actggtttta gtgaaatttt taatgatcct gaaaatactt gtgctatagg
     2701 actttgttta tatggagcgg gatattttac gccttatgaa cttgattcta atgagaaatt
     2761 aagatataaa ggggaaattg aaaattttaa tcgtcaaatt aaacaagata ttgttttgca
     2821 aaaagataca gaaagtgaaa taaaatctga tttttttgat gaaaatttgc aagaaaatga
     2881 tacaattgca atacaagaac aattagattt taaagagcca aaagaaaaaa aacctagtgt
     2941 tttttcaaat atctggcata aaattatgaa tcaattttaa caaggagaaa tttttatgag
     3001 tgaattttta gtagaagaaa tgcaacataa taaaggtgca aaaattaagg ttataggctg
     3061 cggtggcggt ggcggtaata tgattaacca tatggttaaa atgggattaa atgatcttga
     3121 tttaattgca gcgaatactg atgcacaagc tatttcaatt tcattagcaa aaactaaaat
     3181 tcaacttggc gagaaaaaaa ctaaaggttt gggcgctggt atgcttcctg aagtaggtgc
     3241 agaaagtgct agagaaagtt ttgaagaaat aaaagcaagt cttagtcaaa gtgatattgt
     3301 atttattgct tcaggttttg gtggaggtac tggaacgggt gccactccag ttattgcaca
     3361 agcagctaaa gagattggag ctttaactgt ttctgttgta actatgcctt ttgcattcga
     3421 aggaaaacaa agaaaaaaac ttgctgaaag cggtctcctt gagcttaaaa aagaaagtga
     3481 ttctattctt gtaattcaaa atgaaaaatt attgagcatt attgataaaa aagcaggtat
     3541 taaagatgct tttaggttgg ttgatgatat tttagctcgt gctgtaaaag gtatggtgtc
     3601 tatcttactt gataatggag atattaatgt tgactttgcg gatgtaagaa ccatcatgag
     3661 tcatcgcgga ctcgcgctta tgggtgttgg tagtgctagc ggtgaaaatg ctatagaaga
     3721 ggctctttca aacgctatag aatctccttt gcttgatgga atggatatta aaggtgccaa
     3781 gggagttatt ttacatttta aaacaagttc taattgctct ttgtttgaaa tttcggcagc
     3841 agcaaatagt atacaagaaa ttgttgatga aaatgctaag attatttttg gttctactac
     3901 agatgatagc atggaagata gagttgaagt aactattatt gcgacagggt ttgaagataa
     3961 agatacagta gctaaaaaat ctaccgaaga agctcaagct tctaagaaaa atccttattt
     4021 aagtcttaaa aaggtaagcg gtggttacga tgaagagata atggcgcaaa ttgaaacacc
     4081 aactttcttg cgtcgtcaaa tggattaaaa ttgattttta aagcaagatt gagtcaaatc
     4141 ttgcttttta tagtttaaaa ttctctccta ataatctttc aaatatttat ttttctttgt
     4201 ttttaaaagt tggaacactc tttgctttta tagttataaa atcttaaatt tataggtgaa
     4261 aatatgcaaa atggatatta tcaagcaact ggcggaatgg taactcagtt taataaactt
     4321 gatgtgatta ctaataatct tgccaatatc aatacaagtg gatataaaag agatgatgtg
     4381 gttattgcag attttaaaag gatttttaaa gaaactcagg atgagttgcc tatagaaaat
     4441 cacacaagag atgcatctcg ttttgtaaat actacaatag atggaatccc acaagtttct
     4501 caagaatata cggattttag cctaggttct ttaaaggcca caaacaatcc tttggatttg
     4561 gcaatgacta gagaagatgc tttttatttg gttcagacca aagatggaga agtaagatta
     4621 accaaagatg gaaattttca acttgatgat gagggttatt tggtaaataa gcaaggatac
     4681 aaggtattaa gtagtgatta ttttaataat cctcagaatg ctggcatacg cattcctaat
     4741 ggtgctgttc aaattagcgt tgataaaaac ggaagcattg aagttgatgg agctcaaaat
     4801 gcaagattat ttgtagcaca agtagatgat ataagagctt tgcaaaaaga tggggataat
     4861 gtctataaaa tagatgatct aacccgtatt agagatttga aaaactccaa tgctattcgc
     4921 caaggttttt ctcagggatc aaatgttaat ccagttactg aaatggtagg actgattgaa
     4981 gcaaacagaa tggtagaaat gtatcaaaaa gttatgacag ctcatatgga tgacttaaat
     5041 caagaagcta tcaataagct tgcagctgtt aaataattta aaataaaata aaaaaggatt
     5101 aaaaatgatg agatcacttc atactgctgc tacaggaatg gtagcgcagc aaacacaaat
     5161 tgatgttact tcaaataaca tcgccaatgt taatacagca ggttttaaga aaagtcgcgc
     5221 agaatttgct gatcttatgt atcaagttat gaagtatgca ggaacttcaa cttcagctac
     5281 tactctttct ccttcgggta tagaagtggg tgtgggtgtg cgtccaacag cggtaactaa
     5341 agtttttact gaaggaaatt taaaatcaac aagtactgat ggtcttgata tggctattgc
     5401 aggtaatggg ttttttcaaa tacaacttcc tgatggcact ataggatata ctagaaatgg
     5461 gcaatttaca aaagataatg aaggtaatat tgtaaattca gatggttata gacttttacc
     5521 tgaaatgaca atacctgaag gcacaacagc aattaatgtt gctacagatg gaaccgtttc
     5581 tgtaatgcta ccaggggagc aacaagaaac tcaaattggc caagtggagc tagttcagtt
     5641 tataaatcca gcgggtcttc attctatggg tgataatctt tatcttgaaa caggagcaag
     5701 tggtgcacct gttgcgggta tagcaggaca agatgggctt ggaacaataa gacatggatt
     5761 tatagaactt agtaatgttc agcttgttga agaaatgaca gatcttatca caggacaaag
     5821 agcttatgaa gcgggttcta aggccattac aacaagtgat gatatgctag gaattgtaaa
     5881 tcagcttaag cgatagttga tataaaataa ataattttta attctttttt gtttaatggc
     5941 gtgttaaacg ccattaaatt ttttagcaag agtagcaagt tttaaattca taagcagttg
     6001 gacgagcttc tactggccaa acttgtgttt caaattttaa atgctgatag tcatcgataa
     6061 aaatatcgct cattacaggt tttaaataag aattatgtcg gattaaagct tccaaacttc
     6121 ctcttagagt atgtggtaat tgctctatcc ctttttcacg tatttcatcc aaagtaagat
     6181 caaataaatt ttcatccata ggacccacag gaatggtttt atttttgatt ccatcaagac
     6241 ctgccattaa aagactaaca aaagctaaat aaggattagc agtgctatca gggaagcgaa
     6301 tttctatacg agctgaattt ttacctatgc cataaggaac gcgacaactt gctgatctgt
     6361 tttggcaaga ataagttaaa atacaaggag cttcaaagcc aggaactatt cttttgtaag
     6421 agttggaact tggatttgta aaagctgcaa cacttctagc attttttaaa attccaccta
     6481 tataatttat agcagtttga ctaagtccac tgtatccatc tttatcgtaa aataaattta
     6541 ctccattttt ccataagctc atatgaacat gcataccatt gccattatct ccgtataaag
     6601 gttttggcat aaaagtggca gttttgccat ttaaatgagc taccattttt acaacatatt
     6661 tataaatttg aacattgtca gctgcttcta caagcgtgcc aaaatttact cctatttcag
     6721 cttgtccttg tgcaacttca tgatgatgaa caaaagtttt aagacctact ttttcaaggg
     6781 tttgaaccat ttcagaacga atatctacta aagaatcaat tggctgaact ggaaaatatc
     6841 cacctttgtt tcttggcctg tgtccagtat tgtagctatc ggtaaattct ctatcatcat
     6901 tccactctcc ttcttcggta tcaacttcat acttagaaca atgagtagta tcaactattt
     6961 ttacactatc aaaaacaaag aattcatttt ctggtccaaa gtaagcagta tcagctatgc
     7021 cactattttt aaggtgttct attgcttttt ttgctatgct tcttggacat ttttcataca
     7081 tttgtccttt gtaaatatca tacacatcac aaaatactat gatagtagga tcagccgtaa
     7141 aaggatctaa aaaagcactt tgagcatcag gttttaaaat catatctgat ttttctatag
     7201 gttgccatcc atgaattgag cttccatcaa atggaatgcc agtttgaaat gtttcttcat
     7261 tgattgcatg aagattatag gtaatatgat gccaagttcc tatcatatct gtaaaacgaa
     7321 aatcaacaaa aagcacttca ttttgtttgc aaaatttgaa aaaatcatct atattattaa
     7381 caaattttcc catattttta ctc
//
LOCUS       DAPIWB010000068         7311 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.069, whole genome shotgun sequence.
ACCESSION   DAPIWB010000068 DAPIWB010000000
VERSION     DAPIWB010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7311)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7311)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7311
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.069"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            77..1150
                     /gene="ispG"
                     /locus_tag="RJ266_001420"
                     /gene_synonym="gcpE"
     CDS             77..1150
                     /gene="ispG"
                     /locus_tag="RJ266_001420"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HDV7355150.1"
                     /translation="MEYKRFKTRQIKVGNVLIGGDAPISVQSMLFTKTRDIEGSLEQI
                     NRLYFAGANIVRLACLDMADARALKEIKAKSPLPLIVDIHFNHNLAVYCAEFIDGVRI
                     NPGNIGSKENIKEVVKACKERGIPIRIGVNHGSIEKQFSDKFGYGVDAMLESAMYNIK
                     LLEDLDFFDIKISMKTSDAQKTIEAYERLRPLCDYPFHLGVTEAGTKFHSTVKSSIAL
                     GNLLLKGIGDTMRVSMTGELEEEIRVARAILQDSGVQKSGVNIISCPTCGRIQSDLLS
                     AIKIVEEKTKHIKEPLNISVMGCVVNALGEAKGADVAIAFGKNQGLVIRHGEVVAKLK
                     ESELVDRFLAEVEDEVKSRAVKE"
     gene            complement(1180..1878)
                     /gene="flgH"
                     /locus_tag="RJ266_001421"
     CDS             complement(1180..1878)
                     /gene="flgH"
                     /locus_tag="RJ266_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HDV7355151.1"
                     /translation="MKKVLFYVLPFVFFGCSATVDPQISMKPPAYVEELAPKQSNNIE
                     SAPGSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQANKATSRTNTSNLGGGAL
                     TGSSGVVANALNKVNAYSNIGFQTNSSNNYTGTGSQSRNESFNTTISTRVIKILSNGN
                     YFIEGSRELLINGEKQIIQLSGVIRPYDIGQDNTIDSKYIADAKILYKTEGEVDRSTR
                     KPWGSKVIEAIWPF"
     gene            1968..3473
                     /gene="pta"
                     /locus_tag="RJ266_001422"
     CDS             1968..3473
                     /gene="pta"
                     /locus_tag="RJ266_001422"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HDV7355152.1"
                     /translation="MMANLYLMRSRSDELNTIISTNLLKNYSKIYKNIAIYCPVIYIH
                     RVPVLQGWLEEFNINQTVKSAYGFTFREAMEEFSKDPHNFFNVILEEYEELKRKYDFV
                     LVNSFCEFGILDGFDLSIKLAKNLNTPIAAIINDEDKLIAQKYFDHALDGRNYVLINE
                     NFNFEEVQKLKEYDFITPHRFKYELIKQSIKNKKTVVLPESNDERILKAAEILLKSKV
                     VDLILLGDEEKIKQDSAKLSLDLNTIRIINPLKSEYNQEFASILYEARKSKGMSLEEA
                     RKLVQDKTYFGTLLIHTGKADAMVSGASTTTAETIRPALQLIKTKEGISSVSGIFFMG
                     LEDQVLAFADCAVNPSPSAEQLATSAYVSAMTAKSFGLEPRIALLSYSSGDSGKGESV
                     DLVKEALKIAKEKYPELNIDGPMQFDCAYDPKTAAKKMPNSKIAGHANVYIFPDLNAA
                     NICYKAVQRTANALAIGPILQGLKKPVNDLSRGCLVDDIVDTVILSAIQAQ"
     gene            3487..4677
                     /locus_tag="RJ266_001423"
     CDS             3487..4677
                     /locus_tag="RJ266_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HDV7355153.1"
                     /translation="MKILVLNSGSSSIKFKFFDNKIVKASGLVEKIGEQNSKVVLKNT
                     LNNESFERELTINNHEEGLSIVNELFKESGILADLNALDGCGHRIVHGGRNLSEHCLV
                     DDYVLKEIDRVSIFAPLHNPAHLAGIKTMIKAAPSVANAAIFDTAFHRTMPDFAYMYA
                     LPYDFYDKHNIRRYGFHGTSHAYVSSRAAKFLQKDQNELNVISAHLGNGASVCAIEKG
                     KSMDTSMGFTPLEGLIMGTRCGDLDPAILPFVSHLKGLTIEEIDTLMNKKSGVYGICG
                     YNDFRDIEREIEQGNDKARLALDMFCYRLVKYIGSYFAVLPKTDAIIFTGGIGENDSL
                     VRQKVCERLAHLGIELDFELNKQRISGERMINHANSKVKVLVIPTDEELEIARITEEL
                     IGKN"
     gene            complement(4705..>7311)
                     /locus_tag="RJ266_001424"
     CDS             complement(4705..>7311)
                     /locus_tag="RJ266_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent DNA methyltransferase"
                     /protein_id="HDV7355154.1"
                     /translation="SFKRDYKTLSVEHLGTIYEGLLSYFFEIANEDIYYVSYKEKSKE
                     IECYFDNYDFKILEKSKKVEKYTFYKKGQIYLKNSSNSRKSTASFYTPQSIANFLIQS
                     ALKDKLNNENILKFKILDNACGSGHFLVGVLNAITHIVLSDFDHFTNLKELYEEEKEN
                     ILNYIKDFVQDYEVDESDILKRLLLKRIIYGVDLNPFSIELTKLSLWIDSFIFGTPLS
                     FIEHHIKCGNALINSNLSDFKDLIKQNSSNLFTNSITQEFEILQEVFEKLDNLKDTNE
                     EQIKQSKQIYQNEITPKLNKLNLYLNYINTLHFVNKEELQILKALSQDDIQNLSQNEQ
                     AKAIISKYQKEFNFFNYELEFPEIVENQVFKGFDIIIGNPPWDKTKFSDSDFFPQYKS
                     DYRSLIASKKKEIQDNLLAKDYIKQNYEKQKAYINDLSEYYKKAYPLNKGSGDGNLFR
                     LFVEKNLSLLKQDGNLAYVLPSALMFEDGSLTLRKEILENKTLEYFYSFENRQAIFAD
                     VDSRYKFALMLIKNTQANHTHKIKMMFYKTDINSLKNKDEILTLNLKDIKKLSPTHLA
                     LMELKDKQALEILRKSYNAFQNLSFDYIDFRRELDMTNDKDLFIEEFREGLLPLYEGK
                     MIHQFDANFSQTTYFLEKAKFDERLKSKELYRAKKATGKELNPKLIKYDREFFRLGYR
                     KISRDTDERTLIASLLPKNCGGADSTYSNIPKQYVLKDDVICMDIVPYERILFVLALF
                     NSLVVDFIIRNMVQINVSKSYLERIPLPQPSDEEIQNNEIYKTLAKNALLLQLYNDQN
                     HHFDELKQEFNIKNEEIPKTKKAYDILRAKNDLLVKELYGLSDDEFSYMISTFKVLNE
                     KQSEYITLLKTI"
BASE COUNT         2441 a          998 c         1216 g         2656 t
ORIGIN      
        1 tattatcaaa aataaacttt aattaaagca ataaaaagtt aaaatttgat attaaaattt
       61 ttcaaagagt gaagttatgg agtataaaag atttaaaacc agacaaatca aagtaggaaa
      121 tgttttaata ggcggtgatg cacccatttc agttcaatct atgcttttta ctaaaacaag
      181 agatatagaa ggttctttag aacaaatcaa tcgtctttat tttgcaggag caaacatagt
      241 gcgtttggcg tgcttggata tggctgatgc aagggcttta aaagagatta aagctaaaag
      301 tcctctacct ttaatcgtag atattcattt taatcataat ttggctgtat attgtgctga
      361 atttatcgat ggcgtgcgta taaatcctgg caatataggc tctaaagaaa atattaaaga
      421 agtggtaaaa gcatgtaaag aacggggtat ccctatacgc atcggtgtaa atcacggctc
      481 catagaaaaa caatttagtg ataaatttgg ttatggtgtc gatgccatgc tagaaagtgc
      541 gatgtataat atcaagcttt tagaggattt agactttttt gatattaaaa tttccatgaa
      601 gacttcagat gctcaaaaaa ctatagaagc ttatgagaga ttaagaccgc tttgtgatta
      661 tccttttcac ttaggggtaa ctgaagcagg aactaaattt catagcactg taaaaagttc
      721 tatagcttta ggaaatttac ttcttaaagg tataggcgat actatgcgtg tttctatgac
      781 tggcgaactt gaagaagaaa ttcgtgtagc aagggcgatt ttacaagata gcggagtgca
      841 aaaaagcgga gtaaatatca tctcttgtcc aacttgcggt aggattcaaa gtgatttgtt
      901 aagtgcgatt aaaatcgtag aggaaaaaac caagcatata aaagaacctt taaatatcag
      961 tgtcatgggt tgcgtggtaa atgctttagg tgaagctaag ggcgctgatg tggctatagc
     1021 ctttgggaaa aatcaaggac ttgttataag acatggtgaa gttgtagcta aactgaaaga
     1081 aagtgaactt gtagatagat ttttagctga agttgaagat gaggttaaaa gtagggctgt
     1141 aaaagaataa aagccaagaa gcaaggttta accttgcttt tagaatggcc atatcgcttc
     1201 tataactttg ctaccccaag gttttcttgt gcttctatcc acttcacctt ctgttttata
     1261 aagaatttta gcatctgcta tatatttact atctatagta ttgtcttgac cgatgtcata
     1321 aggacgaata acaccgctta attgtatgat ttgcttctct ccgttgatta aaagctctct
     1381 tgaaccttcg ataaaataat taccatttga taaaatttta attacacgtg ttgaaattgt
     1441 agtattgaaa ctttcatttc tgctttgcga gcctgttcct gtgtagttgt ttgaactatt
     1501 ggtttgaaag cctatattag aataagcatt gactttatta agagcattag ctaccactcc
     1561 tgaacttcct gttaaagcac ctccgcctaa atttgaggta ttagttctgc ttgttgcttt
     1621 attagcttgt gtgctttgag tggtactttc ttgtataaca actgtaacta aatcatttac
     1681 attcatagct tttttatctg aaaataaagg attatctcct ttgccaaaaa gcgatcctgg
     1741 cgcactttct atattattac tttgttttgg tgcaagttct tctacataag caggtggttt
     1801 cattgaaatt tgcggatcaa ccgttgcaga acaaccaaaa aacacaaacg gtaacacata
     1861 aaataaaact tttttcattt tcgtccttta aaatatgaat ttttattttt ctttgttaaa
     1921 attagaaaaa gcaaagagtg ttccacattt ataaattcaa ggagaaaatg atggcaaatc
     1981 tttatttgat gagatctaga agtgatgagt taaatactat tattagtaca aatttgctta
     2041 aaaattatag caaaatttac aaaaatatcg caatttattg ccctgtgata tacatacatc
     2101 gcgttcctgt tttgcagggt tggttggaag aatttaatat caatcaaacc gtaaaaagcg
     2161 cctatggttt tacctttaga gaggcaatgg aagaatttag caaagatcct cataattttt
     2221 ttaatgttat tttagaagaa tacgaagagt taaaacgcaa atacgatttt gttcttgtaa
     2281 atagtttttg cgaatttgga atacttgatg gatttgatct tagtataaaa ttagctaaaa
     2341 atcttaatac ccctattgct gctattatca atgatgaaga taaacttata gctcaaaaat
     2401 atttcgatca tgctctagat ggtcgtaatt atgttttgat taatgaaaat tttaattttg
     2461 aagaagtgca aaaacttaaa gaatatgatt ttataactcc tcatcgtttt aaatatgaat
     2521 tgattaaaca aagtataaaa aataaaaaaa ccgttgtttt gccagaaagt aatgatgaga
     2581 gaattttaaa agctgctgaa attttattga aaagtaaagt tgttgatctt attttattgg
     2641 gtgatgaaga aaaaatcaag caagatagtg ctaaattaag tcttgattta aatactatac
     2701 ggattataaa tccactcaaa tcagaatata atcaagaatt tgcttctatt ctttatgaag
     2761 caagaaaatc taaaggtatg agtttagaag aggctaggaa gctagttcaa gataaaactt
     2821 attttggaac tttacttata cacactggaa aagctgatgc tatggttagt ggagcatcaa
     2881 ctactacggc tgaaacgatt cgccctgcat tacagcttat taaaactaaa gaaggtatta
     2941 gttccgtttc aggaattttc tttatgggac ttgaagatca agttttagct tttgctgatt
     3001 gtgctgtaaa tccaagccca agtgctgagc aacttgcaac tagtgcctat gtaagtgcta
     3061 tgactgctaa atcttttgga cttgaaccaa gaatagcttt gctttcttat tctagtggtg
     3121 atagtggtaa aggagaaagc gtagatcttg taaaagaagc attaaagatt gctaaagaaa
     3181 aatatcctga gttgaatata gatggtccta tgcagtttga ctgcgcttat gatccaaaaa
     3241 ctgcagcaaa gaaaatgcca aattctaaga tagcaggtca tgcaaatgtg tatatttttc
     3301 ctgatcttaa cgcagcaaat atttgttaca aagcagttca aagaactgct aatgctttag
     3361 caatcggtcc tattttgcaa ggtcttaaaa aacctgttaa tgatttaagt cgtggatgtt
     3421 tagtagatga tattgtagat accgtaattt taagtgcaat acaagctcaa tagaaaggaa
     3481 tgataaatga aaattttggt tttaaattca ggttcttcat cgattaaatt taaatttttt
     3541 gataataaaa tcgttaaagc cagtggattg gtagaaaaaa ttggagagca aaattcaaag
     3601 gttgtattaa aaaatacttt aaataatgaa agttttgaaa gagaattaac aataaataat
     3661 cacgaagaag gccttagtat agttaatgag ctttttaaag aatcaggaat tttagcagat
     3721 ttaaatgcac ttgatggctg cggtcatcgt atagttcatg ggggaagaaa tttaagcgag
     3781 cattgtttag tggatgatta tgttcttaaa gagatagata gggttagtat ttttgctcct
     3841 ttgcataatc ctgcgcattt agcaggtata aaaacaatga tcaaagctgc acctagtgtt
     3901 gctaatgcag ctatttttga tacagctttt catcgcacta tgcctgattt tgcttatatg
     3961 tatgctttgc cttatgattt ttatgataag cataatatta gaagatatgg ttttcatggg
     4021 acttctcatg cttatgttag ttctagagcg gcaaaatttc ttcaaaaaga tcaaaatgaa
     4081 ttaaatgtca tctctgctca tcttggaaat ggtgcaagtg tatgtgctat agaaaaaggt
     4141 aagagtatgg atacttctat gggctttact ccacttgaag gacttattat gggaacgcgt
     4201 tgtggagatt tagaccctgc tattttacct tttgttagtc atcttaaggg tttaactata
     4261 gaagaaatag atacactgat gaataaaaaa agtggagtat atggaatttg cggttataat
     4321 gattttagag atatagaaag agagatagaa caaggtaatg ataaagcacg cttggctctt
     4381 gatatgtttt gttatcgtct tgttaaatat ataggatcct actttgctgt gttgccaaaa
     4441 accgatgcta ttatttttac aggtggtata ggagaaaatg atagtttggt tcgacaaaaa
     4501 gtatgcgaga gattagctca tcttggtatc gagttagatt ttgaacttaa caaacaaagg
     4561 atttcgggcg aaagaatgat aaatcatgca aattctaaag ttaaagtgct tgttattcct
     4621 acagatgaag aattagaaat cgctagaatt acagaagaac ttatcggtaa aaattaaatt
     4681 ttaaaaacta tataaatctt tcatttatat agtttttagc aaggttatat attcactttg
     4741 cttttcattt aaaactttaa aagtgcttat catgtaagaa aattcatcat cacttaaacc
     4801 ataaagttct ttaaccaata aatcattttt tgctcttaag atatcataag cttttttagt
     4861 ttttggaatt tcttcatttt ttatattaaa ttcttgtttt agctcatcaa aatgatgatt
     4921 ttgatcattg taaagctgta aaagcaaagc atttttagcg agggttttat aaatttcatt
     4981 gttttgaatt tcttcatcac ttggttgagg caggggaatt ctttctaaat aagatttgct
     5041 tacattgatt tgtaccatat ttcttatgat aaaatcaacc actaaagaat taaacaaagc
     5101 taaaacaaat aaaattcttt cataaggcac tatatccatg caaattacat catcttttaa
     5161 aacatattgt tttggaatgt tactataagt actatcagct ccaccgcaat tttttggcaa
     5221 taaagaagct atcaaagttc tctcatcggt atctcttgaa atttttctat atccaagtct
     5281 aaaaaattct ctatcgtatt ttatcaattt aggatttaat tctttcccag tagctttttt
     5341 agctctataa agttctttac tttttaatcg ctcgtcaaat ttagcctttt ctaaaaaata
     5401 agtagtttgg ctaaaatttg catcaaattg atgtatcatt ttaccttcat ataagggtaa
     5461 aagtccttcc ctaaactctt ctataaacaa atctttatcg tttgtcatat caagttctct
     5521 tctaaaatct atataatcaa aagacaagtt ttgaaaagca ttataagatt ttcttagaat
     5581 ttctaaagct tgtttgtctt ttaactccat taaggctagg tgagttgggc ttagcttttt
     5641 gatatctttt aaatttagag ttaaaatttc atctttgttt tttaatgagt ttatatctgt
     5701 tttataaaac atcattttga ttttatgagt gtgatttgct tgcgtgtttt ttataagcat
     5761 aagagcaaat ttataccttg aatccacatc agcaaatata gcttgtctat tttcaaaact
     5821 ataaaaatac tctaaagttt tattttctaa aatttctttt cttaaagtta agcttccatc
     5881 ttcaaacatc aaagcactag gaagcacata agctaaattt ccatcttgtt ttaaaagaga
     5941 aagatttttt tctacaaaaa gacgaaacaa atttccatct ccactgcctt tatttaaagg
     6001 ataggctttt ttataatact cgcttaaatc atttatatat gctttttgtt tttcgtaatt
     6061 ttgctttata taatctttcg ctagcaaatt atcttgaatt tcttttttct tgctagcgat
     6121 taagcttcta taatcgcttt tatattgcgg aaagaaatca ctatcactaa atttagtttt
     6181 atcccaaggt ggattaccta tgatgatatc aaagccttta aagacttgat tttctacgat
     6241 ttcaggaaat tctaactcat agttaaagaa attaaattct ttttgatatt tgctaatgat
     6301 agcttttgct tgttcatttt ggcttaaatt ttgtatatca tcttgactta gggcttttag
     6361 aatttgtaat tcttctttgt tgacaaaatg aagcgtgttg atatagttta gatataaatt
     6421 tagtttatta agttttggtg tgatttcatt ttgatagatt tgtttagatt gtttgatttg
     6481 ttcttcgttg gtatctttta ggttgtcaag tttttcaaat acttcttgta aaatttcaaa
     6541 ttcttgtgtt atggaatttg taaaaaggtt gcttgagttt tgttttatca aatctttaaa
     6601 atcacttaga ttagaattta tcaaagcatt gccgcacttt atgtggtgtt ctataaaaga
     6661 aagtggggtt ccaaagataa aactatctat ccaaaggcta agtttagtaa gctctatgct
     6721 aaaagggttt aaatccaccc cataaataat gcgttttagt aaaagtcgtt ttaaaatatc
     6781 actctcatct acttcatagt cttgcacaaa atcttttata tagtttaaaa tattttcttt
     6841 ttcttcttcg taaagttctt ttaaatttgt aaaatgatca aaatctgata aaacaatgtg
     6901 tgtaatagca tttaaaactc caactaaaaa atgtccacta ccgcaagcat tgtctagtat
     6961 tttaaatttc aaaatatttt cattgtttag tttgtctttt aaagcacttt ggattaaaaa
     7021 attagctatg gattgaggtg tgtaaaagct tgctgttgat tttcttgaat tactagaatt
     7081 tttaagataa atttgtcctt ttttgtaaaa ggtgtatttt tctacttttt ttgatttttc
     7141 taaaatttta aaatcataat tatcaaaata acattctatt tcttttgatt tttctttata
     7201 acttacatag taaatatctt catttgctat ttcaaaaaaa taagaaagca agccttcata
     7261 aatcgtgcct aaatgttcta cacttaaagt tttgtaatct cttttaaagc t
//
LOCUS       DAPIWB010000069         7274 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.070, whole genome shotgun sequence.
ACCESSION   DAPIWB010000069 DAPIWB010000000
VERSION     DAPIWB010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7274)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7274)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7274
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.070"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..563
                     /locus_tag="RJ266_001425"
     CDS             <1..563
                     /locus_tag="RJ266_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355155.1"
                     /translation="LVSVLSSCLLASALSAVSFKEDSLKVSFEGYKTKDMIGTKGEFK
                     NVEYKFSKNIKDLASYLKGAKATIKPSNAFMGEGNDIITNNITKVFFPALLGDTDIKV
                     VFQDVIAGENKGVISAKITMDKKSTIVPLTYTIKDNKFEAKGQFDLHTFKNGSKALKA
                     LSDVAAGHGGISWPLVDISFNADLAE"
     gene            complement(579..1145)
                     /gene="rsmG"
                     /locus_tag="RJ266_001426"
     CDS             complement(579..1145)
                     /gene="rsmG"
                     /locus_tag="RJ266_001426"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HDV7355156.1"
                     /translation="MIFKDYDFLQNYDLKNFEEKVRIYKELLSKFNRIHNLTHLKNID
                     ENIFDSIKILDFYDFSKAKNIADIGSGAGFPAVFLAFLLQSNFHLFEPNPKKAAFLRT
                     LKIECELPNLHIYKEKVQEYKNTFKADIITSRALMDVKPLLEICKNLKDENTVFILWK
                     GSEIYQELENIKDYEIFENNLRRYCILK"
     gene            complement(1146..1706)
                     /gene="ribA"
                     /locus_tag="RJ266_001427"
     CDS             complement(1146..1706)
                     /gene="ribA"
                     /locus_tag="RJ266_001427"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HDV7355157.1"
                     /translation="MKIKISEIANLPSKWGNFQIQSFKENDKEHLCIFKNTPKDTLNL
                     RIHSECLTGDALGSLKCDCGEQLEFSLKYIEKNGGMVIYLRQEGRGIGLFNKVNAYAL
                     QDKGFDTIKANHQLGFKADERTYEIVEFILKHYEISKVNLLTNNPEKLDSIKEKIITR
                     IPILIEPNRFNVEYLNIKQTQMGHLK"
     gene            1764..2747
                     /gene="hemB"
                     /locus_tag="RJ266_001428"
     CDS             1764..2747
                     /gene="hemB"
                     /locus_tag="RJ266_001428"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HDV7355158.1"
                     /translation="MFKRFRRLRLNENLRAMVRENSLSVNDLIYPLFVVNGTGIKKEI
                     SSMPDVFQMSLDEILKECQNVVNLGIKAIILFGVLENEKKDSCGSDALDDEGLVARSI
                     REIKKNFPDLFIISDLCFCEYTDHGHCGIIDPKTKSVDNDATLEISAKQALVHARAGV
                     DMVAPSGMMDGVITTLRKALDKEGFENLPIMAYSTKFASSYYGPFRDVAESAPSYGDR
                     KSYQMDFANGKEALEESLEDEAQGADILMVKPALAYLDVVKEISLHSNLPLCVYNVSG
                     EYAMLKAAKNAGVIDYEKVLYETIIAFKRAGAKLIITYHAKELAKTLKGEK"
     gene            2744..3664
                     /gene="argF"
                     /locus_tag="RJ266_001429"
     CDS             2744..3664
                     /gene="argF"
                     /locus_tag="RJ266_001429"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDV7355159.1"
                     /translation="MKHFLTLRDFSKEEILSLVNHASELKKEPKKLLQDKTLAMIFEK
                     NSTRTRMAFELAITELGGKALFLSSNDLQLSRGEPVKDTARVIGAMVDFVMMRVNKHE
                     TLLEFARYSKAPVINALSELYHPTQVLGDLFTIKEWNKMQNGIAKVAFIGDSNNMCNS
                     WLIAAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGHDKFEALKDKDVVI
                     TDTWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCLPAYRGYEVSEEIFEK
                     HADVIFEEARNRLYMVKALLCFLDNQRGRE"
     gene            3661..4152
                     /locus_tag="RJ266_001430"
     CDS             3661..4152
                     /locus_tag="RJ266_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2603 domain-containing protein"
                     /protein_id="HDV7355160.1"
                     /translation="MKELEKYSTCLKRIDEFSQNLGIKKKDRTIFKMKQSENENEKCL
                     VLENGSFDSPEPWFVIDENDEIHTLLSLQSLKNILESLKQSQKENFELRLEKAIYQQI
                     PVDFNDVWTVAMDEIKQKAQNGTMEVSIDLEKLISKIKQEHPNLFVDMQAMIERVNQN
                     ERL"
     gene            4139..5494
                     /gene="hemN"
                     /locus_tag="RJ266_001431"
     CDS             4139..5494
                     /gene="hemN"
                     /locus_tag="RJ266_001431"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HDV7355161.1"
                     /translation="MRDYKAFVKYSKAGPRYTSYPTAVEFNANFKYEEYIEILKKQDR
                     SLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVVQM
                     HFGGGTPTFFSAKQLQNLILKIRSVFGNFSKDVEISCEIDPRFLNEEQATVLTQNGFN
                     RISFGVQDFDEKVQKEIHRIQPFELTQNALNLVRNKGIKSVNMDLIYGLPYQNLQSFT
                     QTLEKVMLLNPDRLAIFNYAHVPWLKKNMRKFDENTLPSPDVKLEILEFCEKFLSKNG
                     YKMIGMDHFAKENDELFKALENGTLHRNFQGYTTKGGADLVGIGLTSIGEGQRHYAQN
                     FKDMSSYEAALDRGVLPFERGVALSDDDELRKAVIMELMANFKLDIKSIEKEFCIDFQ
                     EYFKEDLKALEEYKDFINFDENFIKVNETGVLLIRNIAMCFDAYMKNISEDKKVFSKT
                     V"
     gene            5496..6761
                     /locus_tag="RJ266_001432"
     CDS             5496..6761
                     /locus_tag="RJ266_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HDV7355162.1"
                     /translation="MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLAAYK
                     EGSLELDKEAKKVFESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKKFGIAWYKKLIF
                     FFLRRRKILDLVAKLGYVFQSCAFRIQNENENTGMKARFSMPFVKKGRLLTSFNKKSF
                     LNSNPKFINNDGEKTIGFFVGCLANYFYIDTANAVLKIAKELKINVDLMKEQVCCGAP
                     QFFTGDFKSVEVLAKKNIEYFEKKLEKLDAIIVPEATCSAMLKIDYEHFFIMQNDLDW
                     AKRAKCVSSKIYMASEYFYKFTSLEEILKTKNKFNYSITYHDPCHARKMQGVFKEPRE
                     LLKTNYHFVEMSNSNTCCGFGGVSMQTDYYDRALSVGLKKAQMIDESKASVVSAECSA
                     CRMQISNALEQNSSKVVFASPLELIAKAL"
     gene            6758..>7274
                     /locus_tag="RJ266_001433"
     CDS             6758..>7274
                     /locus_tag="RJ266_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355163.1"
                     /translation="MMMKIVFKGKSSEYEIQRSCFCVDAFVIKDKIEERDGVDFITSN
                     VDLLEFSDDSFTFEEIVKHFNICDTEDMIIVEDFDMKSNKDNQNQEDDIEHNILKSEK
                     IIHENTKQTSMQFKNLKFFSRIFKNENFLSDFKESKQEVVTIKKHEKLEIFKNLSQED
                     QEISFVKIEILN"
BASE COUNT         2607 a          871 c         1355 g         2441 t
ORIGIN      
        1 ttcttgtaag tgttttaagt tcttgcttgt tagcttcggc tttaagtgct gtatctttta
       61 aagaagatag tttaaaggtt tcttttgaag gatataaaac taaagatatg ataggaacaa
      121 aaggtgaatt taaaaatgta gaatataaat tttctaaaaa tataaaggat ttggcaagtt
      181 atcttaaagg cgctaaagct accataaagc caagcaatgc ttttatgggt gaaggcaatg
      241 atattataac caataatatc acaaaagtat ttttccctgc tttattggga gatacggata
      301 ttaaagttgt ttttcaagat gtgattgcgg gtgaaaataa aggcgttatt tcagcaaaaa
      361 ttactatgga taaaaaaagt actattgtac ctttaactta taccatcaaa gataataaat
      421 ttgaagctaa aggacaattt gatttgcata cttttaaaaa tggttctaaa gcattaaaag
      481 cattaagcga tgttgctgca ggacatggtg gaatttcttg gcctttagtg gatatcagtt
      541 ttaatgctga tttagcagaa taaaaagtag ccttagggct actttaaaat acaatatctt
      601 cttaaattat tttcaaaaat ttcataatct tttatatttt caagttcttg ataaatttca
      661 ctacctttcc ataaaataaa aactgtattt tcatctttta gatttttgca aatttcaagc
      721 aaaggcttga catccattaa ggctcttgaa gtgatgatat cagctttaaa ggtattcttg
      781 tattcttgaa ctttttcttt gtaaatatgt aaatttggaa gttcacattc tatttttaat
      841 gtccgcaaaa aggcagcttt tttgggattg ggttcgaaaa gatgaaaatt gctttgcagt
      901 aaaaaagcta aaaatacagc tggaaatcct gcgccacttc ctatatcggc aatatttttt
      961 gctttagaaa aatcataaaa atctaaaatt ttaatactat caaagatatt ttcatctata
     1021 ttttttaaat gagtaagatt gtgaatgcgg ttaaatttag ataataattc tttataaatt
     1081 cttacctttt cttcaaagtt ttttaaatcg tagttttgca aaaaatcata atctttaaaa
     1141 atcatttatt taagatgtcc catttgagtt tgttttatgt ttaaatactc tacattaaaa
     1201 cgattaggtt ctattaaaat cggtatgcgt gtgatgattt tttctttgat agaatctagc
     1261 ttttcagggt tatttgtgag taaattaacc ttagaaattt catagtgttt gagtataaat
     1321 tctacaattt cataagttct ctcatcggct ttaaagccaa gctgatgatt ggctttaatc
     1381 gtatcaaaac ctttatcttg taaagcataa gcattaacct tgttaaaaag ccctataccc
     1441 cttccttctt gcctaagata aatcaccatt ccgccattct tttctatata ttttagtgaa
     1501 aattcaagct gttccccaca atcacacttt aaacttccta aagcatctcc tgttaagcac
     1561 tctgaatgaa ttcttagatt gagtgtgtct tttggagtat ttttaaatat acataaatgt
     1621 tctttatcat tttctttgaa actttgtatt tggaaatttc cccatttgct aggtaaattc
     1681 gcaatttctg aaatttttat tttcatttac tactctctat aatcaaattt atgttaagat
     1741 tttagcaaaa aaaggacaaa aaaatgttta aaagatttag aagattaagg cttaatgaaa
     1801 acttaagagc catggtaaga gaaaattctt taagtgtaaa tgatttgatt tatccgcttt
     1861 ttgtggttaa tggaacgggg ataaaaaaag aaatttcttc tatgcctgat gtgtttcaaa
     1921 tgagtttaga tgaaatttta aaagagtgtc aaaatgtagt taatttaggc attaaagcca
     1981 ttatactttt tggtgtttta gaaaatgaga aaaaagacag ttgtggaagc gatgctttag
     2041 atgatgaagg gcttgttgca agaagtataa gagagattaa gaaaaatttt ccagatcttt
     2101 ttataatcag tgatctttgt ttttgtgaat acacagatca cgggcattgt gggattatcg
     2161 atccaaaaac aaaaagcgta gataatgatg caactttaga aatttcagcc aagcaagcct
     2221 tagttcatgc aagagcaggg gtagatatgg tagcacctag tggaatgatg gatggtgtta
     2281 tcactacttt gcgcaaagct ttagataagg aaggttttga aaatttgcct ataatggcgt
     2341 attctactaa atttgcatca agttattatg ggccatttcg agatgtagca gagtcagctc
     2401 caagttatgg agatagaaaa agctatcaaa tggattttgc taatggtaaa gaagctttag
     2461 aagaaagctt ggaggatgaa gcacaaggag ctgatatttt aatggtaaaa cctgctcttg
     2521 cttatcttga tgtggttaaa gaaatatccc ttcattctaa cttgcctttg tgtgtttata
     2581 atgtaagcgg agagtatgct atgttaaagg cagctaaaaa tgcaggagtg attgattatg
     2641 aaaaagtttt gtatgaaact ataatagctt ttaaaagagc aggggcaaag cttatcatca
     2701 cttatcatgc taaagaatta gctaaaacgt taaaaggaga aaaatgaaac attttttaac
     2761 tttaagagat ttttctaagg aggaaatttt aagccttgta aatcatgcta gcgagcttaa
     2821 aaaagagcct aaaaaacttt tacaagataa aactttagca atgatttttg agaaaaactc
     2881 tacaagaaca agaatggcat ttgaattagc cataacagag cttggcggaa aggctttgtt
     2941 tttaagcagc aatgatttac aacttagtcg tggtgagcct gtaaaggata cagctagggt
     3001 gataggggcg atggttgatt ttgtgatgat gagggtcaat aaacatgaaa ctttactcga
     3061 atttgcaaga tattctaaag ctcctgtgat caatgcttta agcgagcttt atcatcctac
     3121 tcaggtttta ggggatttgt ttactatcaa agaatggaat aaaatgcaaa atggtatagc
     3181 aaaagttgct tttatcggag atagtaataa tatgtgcaat tcttggctta ttgcggctgc
     3241 gattttgggc tttgaaatta gtatagctat gccaaaaaac tataaaatta gccctgaaat
     3301 ttgggaattt gctatgaaac aggctttgat ttcaggagct aaaatttcct taggccatga
     3361 taaatttgaa gccttaaagg ataaagatgt agtcattacc gatacttggg tttccatggg
     3421 cgaagagaat gaaaaagaac gcaagattaa agaatttgaa ggatttatga tcgatgaaaa
     3481 ggctatgagc gttgccaata aagacgcgat attgcttcat tgtttgcctg cttatagagg
     3541 ttatgaagtg agtgaagaaa tttttgaaaa acatgcagat gtgatttttg aagaagcaag
     3601 aaatcgcctt tatatggtaa aagccttgct ttgctttttg gataatcaga gaggaagaga
     3661 atgaaagagc tagaaaagta tagcacttgc ttaaaacgca ttgatgaatt tagtcaaaat
     3721 ctaggaataa agaaaaaaga tagaacgatt tttaaaatga agcaaagcga gaatgaaaac
     3781 gaaaaatgtt tagttcttga aaatggaagt tttgattctc ctgagccttg gtttgtgatc
     3841 gatgaaaacg atgaaattca cactttgctt tctttgcaaa gtcttaagaa tatacttgaa
     3901 agtttaaaac aaagtcaaaa agagaatttt gaattgcgtt tagaaaaggc gatttatcaa
     3961 caaattcctg tagattttaa cgatgtttgg acggttgcta tggatgagat caagcaaaag
     4021 gcgcaaaatg gcaccatgga agttagtatt gatcttgaaa aattaatttc taaaatcaaa
     4081 caagagcatc caaatttatt tgtagatatg caagcgatga tagaaagggt aaaccaaaat
     4141 gagagattat aaagcttttg taaaatactc taaagcagga ccacgctaca cttcttatcc
     4201 tacagcagta gagtttaatg caaatttcaa atacgaagaa tatatagaaa ttttaaaaaa
     4261 gcaagataga tctttatcgc tttattttca tttaccattt tgtaggagtg cttgttattt
     4321 ttgtggttgc aatgttattt atacagccaa agaagagagt aaagaaaggt atttaactta
     4381 tatttttaaa gagcttgata ttttaagtac tattttagat actaaaagag aagtggtgca
     4441 aatgcacttt gggggcggaa ctccaacttt ttttagtgct aaacaacttc aaaatttgat
     4501 tttaaaaatc agatctgttt ttggaaattt ttctaaagat gtagagatta gctgtgagat
     4561 cgatccgcgt tttttaaatg aggaacaagc cacagtttta acgcaaaatg gctttaatcg
     4621 tatcagcttt ggagtgcagg attttgatga aaaagttcaa aaagaaattc atcgcatcca
     4681 gccttttgaa ttaacacaaa atgctttaaa tcttgtaaga aataaaggca taaagtctgt
     4741 aaatatggat ttaatttatg gtttgcctta tcaaaattta caaagcttta cacaaacttt
     4801 agaaaaagtt atgcttttaa accctgatcg tttggcgatt tttaattacg ctcatgtgcc
     4861 ttggcttaag aaaaatatga gaaaatttga tgaaaatacc ttgccaagtc ctgatgttaa
     4921 gcttgaaatt ttagaatttt gtgagaaatt tttaagcaaa aatggttata aaatgatagg
     4981 aatggatcat tttgcaaaag aaaatgatga gctttttaaa gctttagaaa atggaacttt
     5041 gcatagaaat ttccaaggtt atactaccaa aggcggtgct gatttagtcg gtattgggct
     5101 tacaagtata ggcgaagggc aaagacatta tgcgcaaaat tttaaagata tgtcaagtta
     5161 tgaagctgca ttagatagag gagttttgcc ttttgaaaga ggcgtagctt taagcgatga
     5221 tgatgagctt agaaaagcag tgattatgga gttaatggca aattttaagc ttgatatcaa
     5281 gtcaatagaa aaagaatttt gcattgattt tcaggagtat tttaaagagg atttaaaagc
     5341 tttagaagaa tacaaagatt ttattaattt tgatgaaaat tttatcaaag tcaatgaaac
     5401 aggcgttttg cttataagaa atattgccat gtgttttgat gcttatatga aaaacattag
     5461 tgaagataaa aaagtattct caaaaacggt gtaagatgaa atttagtcaa ataagtgatg
     5521 cttgtgttaa atgtggcaaa tgtatacctg tttgtactat acacgaagaa aatcgcgatg
     5581 aaattactag tccaagagga tttttagatc ttttagctgc ttataaagag ggaagtctag
     5641 aacttgataa agaagctaag aaagtttttg aatcttgttt tttatgcacc aattgtgttg
     5701 aagtatgtcc aagtaaatta agagtagata atgccataga agaagttcgt tatgatatag
     5761 ctaaaaaatt tggtatagct tggtataaaa aacttatttt tttcttttta agaagacgca
     5821 aaattttaga tttggtagct aagcttggct atgtgtttca aagttgtgcg tttagaattc
     5881 aaaatgagaa tgaaaataca ggtatgaagg caagattttc catgcctttt gttaaaaagg
     5941 gaagattgct tacaagtttt aataaaaaaa gtttcttaaa ttctaatcca aaatttatca
     6001 ataatgatgg agaaaaaaca ataggttttt ttgtaggttg tttggcgaat tatttttaca
     6061 tagatacggc taatgcagtg cttaaaatcg ctaaggaatt aaaaatcaat gtggatttga
     6121 tgaaagaaca agtgtgttgt ggagcgccgc aattttttac gggtgatttt aaaagtgttg
     6181 aagttttggc taaaaaaaat attgagtatt ttgaaaaaaa attagaaaaa ttagatgcta
     6241 ttatagttcc tgaggccact tgttcggcta tgttaaagat agattatgaa cattttttta
     6301 taatgcaaaa tgatttagac tgggcaaaac gcgcaaaatg tgtgtcatct aagatatata
     6361 tggctagcga gtatttttat aaatttactt ctttggaaga aattttaaaa acaaaaaata
     6421 aatttaatta tagcattact tatcacgatc cttgccatgc aagaaaaatg caaggagttt
     6481 ttaaagagcc aagagaactt ttaaaaacaa attatcattt tgtagaaatg agtaattcta
     6541 atacttgttg cggttttggc ggggtgagta tgcaaacgga ttattatgat agagctttaa
     6601 gtgtagggct taaaaaagca caaatgatcg atgaaagtaa ggctagtgtg gtaagtgccg
     6661 agtgttcagc ttgtagaatg caaatttcaa atgcattaga acaaaattca agtaaggttg
     6721 tttttgccag tcctttagaa cttatagcaa aagctttgtg atgatgaaga tagtatttaa
     6781 aggcaaaagt tctgaatatg aaattcaaag atcgtgcttt tgtgttgatg cttttgtgat
     6841 taaagataag attgaagaac gagatggtgt tgattttatc acttcaaatg tagatctttt
     6901 ggaatttagt gatgacagtt ttacttttga agaaattgta aaacatttta atatttgtga
     6961 tactgaagat atgattatcg ttgaagattt tgacatgaaa tcaaacaaag ataatcaaaa
     7021 ccaagaagat gatatagaac acaacatctt aaaatccgaa aaaataatac atgaaaacac
     7081 aaaacaaaca agtatgcaat ttaaaaattt aaaatttttt tcaagaattt ttaaaaatga
     7141 aaattttctt tctgatttta aagaaagtaa gcaagaagtt gttactatca aaaaacatga
     7201 aaaacttgaa atttttaaaa atttatctca agaagatcaa gaaattagct ttgttaaaat
     7261 tgaaatttta aatt
//
LOCUS       DAPIWB010000070         7032 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.071, whole genome shotgun sequence.
ACCESSION   DAPIWB010000070 DAPIWB010000000
VERSION     DAPIWB010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7032)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7032)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7032
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.071"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            219..749
                     /locus_tag="RJ266_001434"
     CDS             219..749
                     /locus_tag="RJ266_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV7355164.1"
                     /translation="MQNTIIQKAVNKDLNSILEITKDALNAMKTMNFHQWDENYPNEI
                     VFQEDIQAQELYVFKENDEILGFICINEKFEPEFYKQVIFNKNYDDKAFYLHRLAVKQ
                     NAKGKGVAQKLLNFCENFALENHKASLRADTHSKNFPMNSLFKKLDFNFCGNFDIPNY
                     QDPFLAYEKILNQKAF"
     gene            complement(729..1331)
                     /gene="leuD"
                     /locus_tag="RJ266_001435"
     CDS             complement(729..1331)
                     /gene="leuD"
                     /locus_tag="RJ266_001435"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HDV7355165.1"
                     /translation="MQKFIIHKGIACPLEYANIDTDQIIPKQFLLAVSKQGFGKHLFH
                     DLRYLDDKESVLNMDFNLNKKEYQNSSILVSFENFGSGSSREHAPWALVDYGIRAIIA
                     PSFADIFKNNALGNGLLTIELAKDEVLEIVDELKKSQDKNIEISLLEKRVFFKDKIFS
                     FDLDDFHRICLLEGLDNIALTLKHEAQIKAYEKNSKSFLV"
     gene            complement(1333..2745)
                     /gene="leuC"
                     /locus_tag="RJ266_001436"
     CDS             complement(1333..2745)
                     /gene="leuC"
                     /locus_tag="RJ266_001436"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HDV7355166.1"
                     /translation="MTMAKTLYEKVFDAHVVYEGKNELPILYIDRHLIHEVTSPQAFS
                     GLKMAKRRMARADLTLATIDHDVSTKSMDLNACSDMAKEQITTLMQNTKEFGVRLLGL
                     GDKNQGIVHIVGPELGFTLPGVTLVCGDSHTATHGAFGALAFGIGTSEVEHVMATQTL
                     KQAKLKTMKIECKGQFQKGVYTKDLILYLIAQYGTAKGTGYAIEFCGELIRNLSMEAR
                     MTLCNMAIEFGAKVGMIAPDEITFEYIKGKEFAPKGEEFQKYCEYWKSLRSDEGAKYD
                     ESITLDVSKIKPQISYGTNPSQVIGIDEKIPKISDFKNQSEQKSLLDALYYVNLEQDQ
                     VIEGVKIDIVFIGSCTNGRLEDLKIAADILKGRKIHKNVKALIVPGSMQVRKEAENLG
                     LDKIFIEAGCEWRYAGCSMCLGMNDDKANSGQRVASTSNRNFVGRQGKGSITHLMSPA
                     SAAACAIEGVICDNRKYLGV"
     gene            complement(2732..3808)
                     /gene="leuB"
                     /locus_tag="RJ266_001437"
     CDS             complement(2732..3808)
                     /gene="leuB"
                     /locus_tag="RJ266_001437"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HDV7355167.1"
                     /translation="MKTYKVAVLAGDGIGPLVMKEALKILTFIAQKYNFSFEFNEAKI
                     GGASIDAYGVALSDETLKLCEQSDAILFGSVGGPKWDNLPIDQRPERASLLPLRKHFN
                     LFANLRPCKIYESLTHASPLKNEIIQKGVDILCVRELTGGIYFGKQDLGKESAYDTEI
                     YTKKEIERIARIAFESARIRKKKVHLIDKANVLASSILWREVVANVAKDYQDINLEYM
                     YVDNAAMQIVKNPSIFDVMLCSNLFGDILSDELAAINGSLGLLSSASLNDKGFGLYEP
                     AGGSAPDIAHLNIANPIAQILSAALMLKYSFKEEQAAQDIENAISLALAQGKMTKDLN
                     AKSYLNTDEMGDCILEILKENDNG"
     gene            complement(3805..5340)
                     /gene="leuA"
                     /locus_tag="RJ266_001438"
     CDS             complement(3805..5340)
                     /gene="leuA"
                     /locus_tag="RJ266_001438"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HDV7355168.1"
                     /translation="MKDNKIIIFDTTLRDGEQALGSSLGINQKLQIALALENLGVDVI
                     EAGFPVSSQGDFKAVQKIASKVKNSTICALSRALDKDIDMAYEALKVAKHFRIHTFIA
                     TSTLHMQDKLKKDFDEILSMAKRAIIRARSYTDDVEFSCEDAGRTPIDNLCFMVENAI
                     KAGAKTINIPDTVGYTLPSEFANIIKILFNKVPNIDKAIISVHCHNDLGVATGNSLSA
                     ILQGARQIECTINGLGERAGNCALEEVVMAIKTRKDYLKGFYTDIKCENIFKTSKLVS
                     AITNESIPSHKAIVGSNAFSHSSGIHQDGVLKNRQTYEIISPSAIGIHENRMLMTARS
                     GRAMIKTCLENLGYDENTYNLDDVYERFLRLADKKGQVYDYDLEALMFLSYESEEENE
                     FVLEKLSVISGNIPTACVCMRIKEELKTEACTGNGPVEAVFNCIARITNLKPVLKAYS
                     INAKSSGVDAQGQVDVDLEFKGRKFHGKGLSTDVIEASAQAFVSAYNAIYRSLKVEER
                     KMA"
     gene            5660..6289
                     /locus_tag="RJ266_001439"
     CDS             5660..6289
                     /locus_tag="RJ266_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355169.1"
                     /translation="MLKELLEIKKEMEPVIHEANVKLNVLAREVIVRKKEYEIYGPMV
                     DRVYLDNAIYVKVMSSGRDVKTDNVTIKNGFYMVFVAPEKESTKDIKNKLKVAYEGLD
                     NKFIATLIRSCQRFKEIINKTQATLAKASKMNVVVKTNLGEASAALKFNITIEYTKEN
                     QKLTRENSKSAGSFRDTKTYINLVVEKNTDSQICEKLLDDVEKYFIGGG"
     gene            complement(6325..6969)
                     /locus_tag="RJ266_001440"
     CDS             complement(6325..6969)
                     /locus_tag="RJ266_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002890434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HDV7355170.1"
                     /translation="MNKKLLSIIASATLFSNLALADENSGFFIGADAAWMHAQVKSEL
                     KHKNTKQNFNGDISGNIPSFGLKLGYRLNENHRIYAGYNYSDEFSDFIKTPKIQIEGD
                     FATHKFLTGYDFTPKLFEKTRAVLGVYGGYARTDLTLKTSFLSLSQNFDGYFYGAKIG
                     ALYDLTPHNEIELGFKAEQIHYNSRNFYQNKVGSNFYDPKQTNYGVYLGYNYKF"
BASE COUNT         2377 a         1325 c          912 g         2418 t
ORIGIN      
        1 ttcctttttt tgttaaatta ttagaataaa aagctataat aatctcgcta aaaagaggaa
       61 aagataaagg tatattcaag tgaccctccc ctttttatat tttaaatagg gttctttttg
      121 gagttctttg aaaaaatata aaaagctata aatacctaaa aataagtatc tatagatatt
      181 agttaaaact caatcggatc cttatacaaa ggattatcat gcaaaacact atcatacaaa
      241 aagccgtcaa taaagattta aattctatac ttgaaatcac aaaagatgct ttaaatgcta
      301 tgaaaactat gaattttcac caatgggatg agaattatcc caatgaaata gtttttcaag
      361 aagatataca agcacaagaa ctttatgtgt ttaaagaaaa tgatgaaatt ttaggcttta
      421 tctgtatcaa tgaaaaattt gaacctgaat tttacaaaca agttattttt aacaaaaatt
      481 atgatgataa agccttttat ctacaccgtt tagctgtcaa acaaaatgca aaaggcaaag
      541 gcgtggcaca aaaactttta aatttttgcg aaaattttgc cttggaaaat cacaaggcaa
      601 gtttaagagc agatactcat agtaaaaatt ttcctatgaa ttcgcttttt aaaaagcttg
      661 attttaattt ttgtggaaac tttgacatac ctaattacca agatcctttt ttagcttatg
      721 aaaaaattct aaaccaaaaa gctttttgag tttttttcat aggctttgat ttgtgcttca
      781 tgttttaaag ttaaagctat attatcaagt ccttccaaaa gacaaattct gtgaaaatca
      841 tctaaatcaa aagaaaaaat cttatcttta aaaaatactc ttttttccaa caaagaaatt
      901 tctatatttt tatcttggga tttttttaac tcatcaacta tttccaaaac ctcatcttta
      961 gcaagttcta tagtgagcaa accgtttcct aaggcattgt ttttaaaaat atccgcaaaa
     1021 gaaggtgcga taatagctct aataccataa tcaaccaaag cccaaggcgc atgctctctt
     1081 gaagagccac taccaaaatt ttcaaaactc accaaaatag agctattttg atattctttt
     1141 ttattgagat taaaatccat atttaaaaca ctttctttat catctaaata acgcaaatca
     1201 tggaacaaat gcttgccaaa accttgctta gacactgcaa gtaaaaattg cttaggtata
     1261 atttgatctg tgtctatatt ggcatattct aaaggacaag ctataccttt gtgtataata
     1321 aatttttgca tattaaactc ctaaatactt tctattatca caaataacac cttctatggc
     1381 acaagctgct gcacttgcag gactcatcaa atgagtgata gaacctttgc cttgtctgcc
     1441 tacaaagtta cgatttgaag ttgaagcaac tctttgacct gaatttgctt tgtcatcatt
     1501 cataccaaga cacatagaac accctgcata tctccactca caccctgcct cgataaaaat
     1561 cttatcaagt cctaaatttt cagcttcttt tcttacttgc attgaaccag gcacgattaa
     1621 agctttaaca tttttatgaa ttttgcgccc ttttaagata tcagcagcta ttttaagatc
     1681 ttctaaacgc ccatttgtgc aagatcctat aaatacaatg tcgattttta ccccttctat
     1741 aacttggtct tgctctaaat ttacataata taaagcatca agcaaagatt tttgctcgct
     1801 ttgattttta aaatcactta tttttggaat tttttcatct atgccaatca cttgcgaagg
     1861 atttgttcca tagctaattt gtggttttat cttgcttaca tctagagtaa tactctcatc
     1921 atattttgct ccttcatcac ttcttaaact cttccaatac tcacaatact tttgaaattc
     1981 ttctccttta ggtgcaaatt cctttccctt aatatactca aaagtgatct catcaggagc
     2041 tatcatacct actttcgctc caaattctat agccatatta caaagagtca ttctagcttc
     2101 catgcttaga tttcttataa gttctccgca aaattctata gcatagcctg tgccttttgc
     2161 tgtgccgtat tgtgcgatca aatacaaaat caaatcctta gtataaacgc ctttttgaaa
     2221 ctgcccttta cattcgattt tcatagtttt aagtttggct tgttttaaag tttgcgttgc
     2281 catgacatgc tctacttcac tcgtgcctat accaaaggct aaagctccaa aagccccatg
     2341 tgttgccgta tgagaatccc cgcaaactaa agtaacccca ggtaaagtaa agccaagctc
     2401 aggacctact atatgaacta tgccttgatt tttatctcca agtcctaaaa gccttactcc
     2461 aaattcctta gtattttgca tcaaagttgt aatttgctct tttgccatat cagaacaagc
     2521 atttaaatcc atacttttag ttgaaacatc atgatctata gtagccaaag ttaaatccgc
     2581 tcttgccatt ctacgcttag ccattttaag ccctgaaaat gcttgagggc ttgttacttc
     2641 atggattaaa tgtctatcga tataaagtat aggaagttcg tttttgcctt cataaaccac
     2701 atgagcatca aagacttttt catataaagt tttagccatt gtcattctcc tttaaaattt
     2761 ctaaaataca atcccccatt tcatcggtat ttaaatacga cttagcattt aaatccttag
     2821 tcatttttcc ttgtgccaat gccaaagata tagcattttc tatatcctgt gcggcttgtt
     2881 cttctttgaa actatacttt aacatcaaag ccgcacttaa aatttgagct atgggattgg
     2941 ctatatttaa atgagctata tcaggcgcac ttccacctgc tggctcataa agtccaaaac
     3001 ctttatcatt caaacttgct gaacttaaca aacccaaaga tccattaatg gcagctaact
     3061 catcactcaa aatatcacca aaaagatttg aacaaagcat aacatcaaaa atgctaggat
     3121 tttttacaat ctgcatcgca gcattatcca catacatgta ctctaagttt atatcttgat
     3181 aatcttttgc aacatttgcc accacttctc gccacaaaat agaacttgct aaaacattcg
     3241 ccttgtcgat taaatggact tttttctttc ttattcttgc actttcaaaa gcgatacgag
     3301 ctatcctttc tatctctttt ttagtgtaaa tttcagtatc atacgcactt tctttaccta
     3361 aatcctgctt accaaaataa atcccacctg taagctctct aacacataaa atatccactc
     3421 ctttttggat aatctcattt tttaaaggtg aagcatgggt taaactttca taaattttac
     3481 aaggacgcaa atttgcaaac aaattaaaat gctttcttaa aggcaaaagc gaggctcttt
     3541 caggtctttg atctatgggc aaattatccc atttaggccc acccacagaa ccaaataaaa
     3601 tcgcatcact ttgctcacaa agctttaaag tttcatcact taaagccact ccataagcat
     3661 ctatacttgc accacctatt ttagcttcat taaattcaaa actaaaattg tatttttgtg
     3721 cgataaaagt taaaattttt aaagcctctt tcatcaccaa aggccctatg ccatctcctg
     3781 ctaaaacagc tactttataa gttttcatgc cattttcctt tcttctactt ttaaagagcg
     3841 ataaatcgca ttgtaagcac tcacaaaagc ttgtgctgaa gcttctatca catctgttga
     3901 aagtcctttt ccatggaatt ttctcccttt aaattccaaa tctacatcca cttgcccttg
     3961 agcatctact cctgaacttt ttgcattgat actataagct tttaacacag gctttaaatt
     4021 tgttatccta gcaatgcagt taaaaactgc ttcaacagga ccatttcctg tgcaagcttc
     4081 agtttttagc tcttctttga tacgcataca aacacaagca gttgggatat ttccactgat
     4141 cacacttaat ttttcaagca caaattcatt ttcttcttca ctctcataac ttaaaaacat
     4201 caaagcttct aaatcataat catatacttg acccttttta tccgcaaggc gtaaaaaacg
     4261 ctcataaaca tcatctaaat tataagtatt ttcatcatag cctaaatttt caaggcaagt
     4321 ttttatcata gcccttccac ttcttgctgt cattaacata cgattttcat gaattcctat
     4381 ggcactaggg cttatgatct cgtaagtttg cctattttta agcactccat cttgatgaat
     4441 gcctgaacta tgagaaaacg cattgctacc cactatagct ttatgtgaag gtatgctttc
     4501 attagtgata gctgaaacta attttgaagt tttaaagata ttttcacatt taatatcagt
     4561 ataaaaacct tttaaataat cttttctagt ttttatcgcc ataaccactt cttctaaagc
     4621 acaattgccc gccctttcgc caagtccatt tatagtgcac tctatctgtc ttgcaccttg
     4681 taaaatagca cttaaactat tgcccgttgc cacacctaag tcattgtgac aatgcacaga
     4741 aatgatagct ttgtctatat ttggcacttt gttaaataaa attttgatga tattagcaaa
     4801 ttcgcttggc agagtatagc ctacggtatc tgggatattt atagttttag cacctgcttt
     4861 tatcgcattt tccaccataa aacaaagatt atctataggc gttcttcctg catcttcgca
     4921 tgaaaattct acatcatcag tataagatct tgctcttata atcgctcttt ttgccataga
     4981 caaaatttca tcaaaatctt tttttaattt atcttgcata tgcaaagtcg aagtggctat
     5041 aaaagtatga attctaaaat gctttgccac ttttaaagct tcataagcca tatctatatc
     5101 tttatccaat gctctagaaa gtgcacaaat agttgagttt ttaaccttag aagcgatctt
     5161 ttgcaccgct ttaaaatccc cttgtgaaga taccggaaaa cctgcttcta taacatctac
     5221 gcctaaattt tcaagcgcta aagcgatttg taatttttga ttgataccca aagaactgcc
     5281 taaagcttgt tctccatctc gcaaagtggt atcaaagatt atgattttat tatctttcat
     5341 gatttaatcc tttaaaacca aacagactga atgaattaaa aattcaaaaa cttaacaaca
     5401 acaataaaaa attaaaaatg taaaaaatga ttaaaaataa aattgagttt tagagtgaaa
     5461 gttgcagtag cagattaaaa gtattgtctt tacttttttg ttggactgaa tttgaaattt
     5521 caaaaatttg tttcatcttt tcctcctttg ttaaaattaa tacttaatgt atcatatttt
     5581 tagtaaatgt gtttgtaaaa ttcttaaatt aagaaaatta ttgatataat tgtaatttta
     5641 agtaacaaaa aggaagttga tgttaaaaga actcttagag attaaaaaag aaatggaacc
     5701 tgttatccac gaagccaatg tgaaattaaa tgtcctagct cgtgaagtca tagtccgaaa
     5761 aaaagaatac gaaatttatg ggcctatggt agatcgtgtt tatcttgata atgccattta
     5821 tgttaaagtt atgtcaagtg gacgcgatgt aaaaacagac aatgtgacta taaaaaatgg
     5881 tttttatatg gtttttgttg cccctgaaaa agaaagtaca aaagatatca aaaataaact
     5941 caaagtagct tatgaaggac ttgataacaa atttatcgct acacttatac gatcttgcca
     6001 acgctttaaa gagatcataa acaaaaccca agctacactt gctaaagctt ctaaaatgaa
     6061 tgtggtagta aaaacgaatt taggtgaagc aagtgctgct ctaaaattta acatcactat
     6121 agaatatact aaagagaatc aaaaactcac tcgtgaaaat tcaaaatcag caggaagttt
     6181 cagagatact aaaacttata tcaatcttgt agtagaaaaa aatacagatt ctcaaatttg
     6241 tgaaaaacta cttgatgatg ttgaaaaata ctttatcggt ggaggttgat ttcattaatg
     6301 caagttataa aaacttgcat tagattaaaa tttataatta tatcctaaat atacaccata
     6361 atttgtttgt ttaggatcgt aaaagtttga acccacttta ttttgataaa aatttctaga
     6421 attataatga atttgctctg ctttaaagcc taattctatt tcattatgtg gtgtcaaatc
     6481 atataaagca cctattttcg ctccataaaa ataaccgtca aaattttgcg acaaagataa
     6541 aaagcttgtt tttaaggtaa gatctgttct tgcatatcct ccatacacac ctaaaacagc
     6601 tctggttttt tcaaaaagct taggagtaaa atcataacct gttaaaaatt tatgtgtagc
     6661 aaaatcacct tcgatttgaa ttttaggagt tttgataaaa tcactaaatt catcagaata
     6721 attataacca gcataaattc tatgattttc atttaaacga tatccaagtt ttagaccaaa
     6781 cgatggtata ttacctgaaa tatctccatt aaaattttgc tttgtattct tatgttttaa
     6841 ctcacttttt acttgagcat gcatccaagc tgcatcagca cctataaaaa aaccagaatt
     6901 ctcatctgct aaagccaaat ttgaaaacaa agtagcactt gcgataatgc ttaataattt
     6961 tttattcata acctaactcc ttataataaa attcgatcta aaaaatttag atctttttat
     7021 attatatatt ct
//
LOCUS       DAPIWB010000071         6881 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.072, whole genome shotgun sequence.
ACCESSION   DAPIWB010000071 DAPIWB010000000
VERSION     DAPIWB010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6881)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6881)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6881
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.072"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..651
                     /locus_tag="RJ266_001441"
     CDS             <1..651
                     /locus_tag="RJ266_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355171.1"
                     /translation="CSVVLSSSVCFAAVQAASKDGKIFYISEHSFKDNQVYDPQAEIF
                     KKINGKNFYASKSKYPISNLTMIYNNPKSGNKNLSKLEILTPDTSKEEIITAFSTLGT
                     VSSDTQAVPSSFMPFIVTAYAQNTNATNNKLILENGELSSVYFCKPSIGDCGVPNNSQ
                     KGDRFKYLITAAFTDRGEGFNNQTILKENSYINNGCRKYLHLALKWSSLYFRICSF"
     gene            581..2509
                     /locus_tag="RJ266_001442"
     CDS             581..2509
                     /locus_tag="RJ266_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355172.1"
                     /translation="MGVENIYTLPLNGVPYISGSVAFDGEAKDNKLILESNTKIDLHN
                     SQYFSDEEGKDIYDERITRLMGAFGINSNLQNNKVLIDSANIVLHGPDGEYTARSTFE
                     ILGALADVNNLKKYNVSKNSVIIKNLNLDLMVNSQNKITFYDAVLFGEIYGGRTLQGN
                     AEKNSIEVYHFNSLDHLNKNIKTHASLNLYGGYSNDGEANGNKIVFRLKKPLKISDNF
                     YGKNYYNLYGGFATEGANFNVFDIQNDLTYEKVPQNYSDKFTVYAARTLSGKANNNTL
                     SIKDSVISLPLYAFITSETTLDGIDYIADESNNNEVNFENIKSSKNLSLMINAKNVSN
                     NKINYNLIQSLTEASSLGKGSKIILKATQNANNNLIKLKDCSSAAVESSCIIKADKES
                     AFNKIIINNTAFSTASDKRQGYVGLIAGVSANSHDNIMELVNLNIDEYKNQDAIFLAP
                     SGTSDISNFKSYNNTLYLGGELNFFKDVNIDLLSGSVFHEVNKKGKIITQILPHQEDF
                     SKNNHLIIDTQDVKSEVVNNFENFTFILPNKIKNPILTIEKLINLPANGSMEILTKNK
                     PTKGKYILIQSDVGIYDGDNGLLNQQELKNLLEKMKNNKNKFNYNKIEKLAKSTLKNV
                     NFSFEVSDDAKIIYINIL"
     gene            2521..4170
                     /locus_tag="RJ266_001443"
     CDS             2521..4170
                     /locus_tag="RJ266_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HDV7355173.1"
                     /translation="MKKMSKHIVLSFAVSSLLFSQAYALPSGGKFTHGTSGAIHTSGN
                     TVMITEKGQNHVIQWGGGFNIAQGKSVNFTTSGKNYLNIAYHKDASKIDGALNGGNNN
                     IFLVNPMGVLIGQTGTITAGKFVASTTPLNDENVKTFLKQGASFSPAFDVSKQGNIIN
                     LGKINADNIVLIGNKVEINKGKITLDVLKLEGNKVYVDAGVVKDTKNIVAKAEQEAII
                     QQSITSFEENGALLGNSSSKFSFDDSSKVKNWTKYGSIADATEWNKFADFWNVNKEKF
                     RTAFDHFRLIDDIDFSGVKTYIVGDNTSNAFAKSFDGSGYALKNVNINSSNQYVGIFG
                     VVQNSYIRNLNIQGLKIASTGYDAYVGGIVGQNIANSYTGFENVTVNDLVINTAVNTK
                     VGGIIGWGNGSGGNNTINFTNVAINNISIVAKEGSYVGGIGRQIDGGNFNNVVVNDIE
                     KLITSGNDSKTGGFTGKVGNLKINNAYLFYKNGAILSAGNYKTQAGKVIGDPGISVNN
                     NFSNIYVYHNLENGYIDEGQNFFKSVQYNNEVTGKKILIVL"
     gene            4167..5069
                     /locus_tag="RJ266_001444"
                     /pseudo
     CDS             4167..5069
                     /locus_tag="RJ266_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002869418.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5165..6856
                     /locus_tag="RJ266_001445"
                     /pseudo
     CDS             5165..6856
                     /locus_tag="RJ266_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002893445.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
BASE COUNT         2643 a          815 c         1226 g         2197 t
ORIGIN      
        1 tgtagtgtgg ttttatcttc ttcggtttgt tttgcggcgg ttcaggctgc aagcaaggat
       61 ggaaaaattt tttatatttc tgaacattct tttaaggata atcaagttta tgatcctcaa
      121 gcagaaattt ttaaaaaaat taatggaaaa aatttctatg cttctaagtc aaaataccct
      181 atatcaaatt taactatgat ttataataac cctaaatctg gaaataaaaa tttatccaag
      241 cttgaaattt taactccgga tacttcaaaa gaagagatca taacagcttt tagcacttta
      301 ggaaccgtat cttcagatac tcaagccgtt cctagttctt ttatgccttt tattgtaaca
      361 gcttatgcgc aaaatacaaa tgcaacaaat aataaactta tattagaaaa tggagaatta
      421 tcttctgtgt atttttgcaa accaagcata ggggattgtg gagtacctaa taattctcaa
      481 aaaggcgatc gttttaagta tttaattact gcggcgttta ctgacagggg ggagggattt
      541 aacaatcaaa ccattttaaa agaaaactcc tatatcaata atgggtgtag aaaatatcta
      601 caccttgccc ttaaatggag ttccttatat ttcaggatct gtagcttttg atggtgaagc
      661 taaagacaat aaattaatct tagagtcaaa tacaaaaatt gaccttcata attcccagta
      721 tttttcagat gaagaaggta aggatattta tgatgaaaga attactcgtt taatgggagc
      781 ttttggcata aattctaatt tacaaaacaa taaagttctt atcgattcag ccaatatcgt
      841 ccttcatggg ccagatggtg agtatacagc tcgttcgacc tttgaaattt taggtgcttt
      901 agctgatgta aataatctta aaaaatacaa tgtaagtaaa aattctgtaa taattaaaaa
      961 tttaaattta gatttaatgg taaattcgca aaataaaata actttttatg atgctgtttt
     1021 atttggagaa atttacggtg gaagaacatt acagggtaat gcagagaaaa attctataga
     1081 agtttatcat tttaactcat tagatcatct taataaaaac attaaaacac atgcatcgtt
     1141 aaacctctat ggtgggtatt ctaatgatgg tgaagctaat ggaaataaaa ttgtatttcg
     1201 tcttaaaaaa cctttaaaaa tcagtgataa tttttatgga aaaaattatt acaatcttta
     1261 cggaggtttt gctacagagg gtgcgaattt taatgttttt gatatacaaa atgatttaac
     1321 ctatgaaaaa gttccacaaa attattctga taaatttacc gtatatgcgg caagaacttt
     1381 aagtggaaaa gcaaataata ataccttaag tataaaagat tctgttattt cattgccttt
     1441 atatgctttt attacaagtg aaactacgct agatggtata gactatatcg ccgatgaatc
     1501 aaacaataat gaagtaaatt ttgaaaatat taaatcatct aaaaatttaa gtttgatgat
     1561 caatgctaaa aatgtttcaa ataataaaat aaattataat ctcattcaga gtttaaccga
     1621 agcgagttct ttaggaaagg gctcaaaaat tattttaaaa gcaactcaaa atgcaaacaa
     1681 caatcttata aagcttaaag attgttcttc ggctgccgtg gaaagttcgt gcatcataaa
     1741 agcagataaa gaaagtgctt ttaataaaat catcatcaac aacacagctt ttagtactgc
     1801 ctcagataaa agacaaggtt atgtggggtt gatagctgga gtgtctgcaa attctcatga
     1861 taatatcatg gagcttgtta atttaaatat agatgagtat aaaaatcaag atgctatatt
     1921 tttagctcca tctggaactt cggatatttc aaattttaaa tcttataaca atactttata
     1981 tttaggtgga gagttgaatt tctttaaaga tgtaaatatc gatttgcttt ctggttctgt
     2041 ttttcatgaa gtaaataaaa aaggtaaaat aatcactcaa attctaccgc atcaagaaga
     2101 tttttctaaa aacaatcatt tgattataga tactcaagat gtcaaatcag aagtggtaaa
     2161 taactttgaa aattttactt ttattttacc aaataaaata aaaaatccta tcttgactat
     2221 agaaaaactt atcaatcttc ctgcaaatgg aagtatggaa attcttacta aaaataaacc
     2281 aacaaaagga aaatatattc tcatacaaag tgatgttgga atttatgatg gtgacaatgg
     2341 attgttaaat caacaagaat taaaaaattt gttagaaaaa atgaaaaata ataaaaataa
     2401 atttaattac aacaagatag aaaagttggc taaaagtaca ttgaaaaatg taaattttag
     2461 ctttgaagtt tcagatgatg caaaaataat ttatatcaac atactttaaa ggagagtaac
     2521 atgaaaaaga tgagtaaaca tatagtttta tcatttgcgg tgagttcttt gctcttttct
     2581 caagcttatg ctttaccaag tgggggtaaa tttactcatg gtacaagtgg ggctatccac
     2641 acctctggaa atactgtaat gattacagaa aaaggacaaa atcatgttat ccaatggggt
     2701 ggtggtttta atatagctca ggggaaaagt gtaaatttta caacttctgg taaaaactac
     2761 ctaaacattg cttatcataa agatgcttct aaaatagatg gagctttaaa tggcgggaat
     2821 aacaatatct ttttagttaa tcctatggga gttttgattg gtcaaacagg aactatcact
     2881 gcgggaaaat ttgtagctag cacgacacct ttaaatgatg agaatgttaa aactttttta
     2941 aagcaaggag ctagtttttc tccagcattt gatgtaagca agcaaggaaa tattatcaat
     3001 cttggaaaga ttaatgcaga taatattgtt ttaataggaa ataaggttga aatcaataaa
     3061 ggaaaaatta ctttggatgt attaaaactt gaaggtaata aagtttatgt tgatgctgga
     3121 gtggtaaaag atacaaaaaa tatcgtagcc aaagcagagc aagaagctat cattcaacaa
     3181 agcataacaa gttttgaaga aaatggagct ttattgggta attctagtag taaatttagt
     3241 tttgatgata gtagtaaagt taaaaactgg actaaatatg gaagtattgc ggatgcaaca
     3301 gaatggaata aatttgctga tttttggaat gtaaataaag aaaaatttag aacagctttt
     3361 gatcattttc gtttgattga tgatattgat tttagtggcg tgaaaacata catagtaggt
     3421 gataatacaa gcaatgcttt tgctaaatct ttcgatggtt ctggttatgc tttaaaaaat
     3481 gttaatatta attcatcaaa tcaatatgta ggaatttttg gagttgttca aaatagctat
     3541 ataagaaacc ttaatattca aggattgaaa attgcttcaa ctggttatga tgcttatgtt
     3601 ggaggtatag tagggcaaaa tattgcaaac agttatacgg gttttgaaaa tgtgactgtt
     3661 aatgatctcg ttattaatac agctgtaaat actaaagttg gcggaataat aggctgggga
     3721 aatggtagtg gagggaataa cactatcaat tttacaaatg ttgctattaa taatataagt
     3781 atagtagcaa aagaaggttc ttatgtgggt ggcataggca gacaaattga tggtggtaat
     3841 tttaataatg ttgtggttaa tgacatagaa aaacttataa cttctgggaa tgatagtaaa
     3901 acaggaggat ttactggaaa agttggaaat ttaaagatta ataatgctta cttattttat
     3961 aaaaatggag caattttgag tgctggaaac tataaaacac aagctggaaa agttattggt
     4021 gatcctggaa ttagtgtaaa taataatttt agtaatattt atgtttatca taatttagaa
     4081 aatggttata ttgatgaagg acagaatttt tttaagtctg tgcaatataa taatgaagta
     4141 acaggaaaaa agattttgat agtgctgtaa gaaagaaatt taacgatata aaatatcttg
     4201 ataataattc ttatgctttt gctgattctt ttaccaaggc aacagatgct gtgaaattat
     4261 ccaaagacga ctttgaccct aaattgcttc aaagaatttt agatgatttg atgaatggaa
     4321 aatacactta tgattttgat accaaaactt ggatttacgc agatagcaag ggtgtggcag
     4381 gggaaaatga agccagtgag atcactcaaa gtttaaattt cttaaataca tttaaagata
     4441 ctggagtaga acaagaattt ttaaagttat ggcaaggttc gcaagaacaa agttataaaa
     4501 attataccaa tctttatgaa aaatggacgc aaaagaaaac tgctatggat aaaatcaaaa
     4561 ccggcaaagg ttgtttcgct agttttaaag aagaattaca aaaataccaa gaagccttag
     4621 ctcaacttga caaagaaaat aaaaactatg aaaaaatcaa agaatcaggc ttagttagcg
     4681 atgaaacgct tagagttatg tatgcaaaac ttttagaaca aaaagaagct cttgaaaagc
     4741 agtttgcgga tcttagtgga aatgaaggat ttcactataa gcttgaaaat gagattctaa
     4801 attctcaagg ttttgctata aatggaagcg atgtagatgg taaagtgtac actggaaaat
     4861 ataattttga aggaaaatta gcctcattgc cagaaaaatc aaatatatct atctatgagc
     4921 cagataaaca aaaaaagagg gagggggtga agatccagac aaaccttctg tattgccgcc
     4981 tgaaattcct gaaaaggttg tagaagctcc tataaaaatt caaactaaag tagacacaaa
     5041 aaaagaagat gatgatcaag tggacatagg aaaagcagat gctagaagta gtggtttgcg
     5101 ttgtattgta agtgataatt ttaagacaat gaacatttgt gtaaatgcaa aataggaaat
     5161 aaaaatgaga aaaattttag ttgttttaat cttattgtaa gtattttcac atgctgaaga
     5221 gctaaataat aataaaataa gagagcttat agaaagctct tctgaagcaa atggaccata
     5281 aaataaaaat taaaaaatac attaaaaaat caaaaaagcc ctgtaaattt taaagagcaa
     5341 aatactacaa atattgcaaa tttacaaact gatcaaaatg aagctaaggt ttttgtaaga
     5401 gagtatgttt tgcatatcga taataaagat ttgacattta aaaaattaag aattagcgaa
     5461 aaataaattc aagatgcaat agctgaatat cgcaaccaag aattaagctt acaaaattta
     5521 aaagatataa caaacattat agcttattat tgtcaattaa gtggctatcc ttcggcaact
     5581 gcttatatac caccgcaaga tttaagttct aacaaagtgc aaattaacat agcttttgga
     5641 acttttagga aaagtaatta ttaaaaacaa ctcaggtgtc agagattatg ctttagagag
     5701 taaattgaac aaaaatctta aagggaaagt tatcacaact aaaaatgtgg aaaatgaaat
     5761 ttataaaatc aatgaaatat acggaatcca aaccaatgct aatttacaat caggtgatgg
     5821 ttgtggagaa agcgatgtta ttatagaagt aaacaaaggt gagatagtgt aactttaact
     5881 ttatattcta acaactatag gactaaagaa acaggtcgtt ttagagcagg aatgagtcaa
     5941 agtttaaaca atatagcaag ataaggggat aacttaaatt tttatcttca agatagtgat
     6001 gaaaatcaaa cagattatgg gattaattat agtactttta tagggaattt aaaaattact
     6061 ccattttgca actcaaggac attatgttcc tggcagaatt tatagaaatc ttagttttta
     6121 tagggactct atgaatgttg gagtaaattt ttcttatcct gtgtttttat atactgagta
     6181 ttctttatat cttgtttcgg gttttactca taaaaagatt aaagattatt atcttgatgg
     6241 tttagtaagc aatgaaaaag cgagaaatag tgtaaatttg ggcatagaaa gaacttataa
     6301 aggtttggag aataatgtcc taggttatac tttaaatttt atatatggta atgttgaaaa
     6361 tgatggtgat ttttctggat ttaatggagt aaatttagga aattttggaa aaatgaattt
     6421 aaatttaagc aacaaatatc aattctaaga acgcttaact cacatttttc aacttaatta
     6481 tcaaaaagtt atcagcgatg ctgttttaga tagtagtgaa tccgtatctt taggtagacc
     6541 ttgtggtgta tgtgtttgtt tagaaggtga gggaagtgcg gataatgttg tttctggcgc
     6601 cttgggaata agatttcaaa cacctttaga agggctttac tcgactcctt tttatgatat
     6661 agggtattct tggtatgaaa ataaagaata tcaaagtgaa aatcattatc ttatggatgc
     6721 aatgggtata caaatactct atacaagaag tgctaatttt tatgtaaaaa tggatgctgc
     6781 aagagctgtt catcggttta aacacgatgg agaacatcga gcaagagttt atgcaagcct
     6841 agaaaaatac ttttaacttt ggggtgattg gaaaatcccc c
//
LOCUS       DAPIWB010000072         6859 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.073, whole genome shotgun sequence.
ACCESSION   DAPIWB010000072 DAPIWB010000000
VERSION     DAPIWB010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6859)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6859)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6859
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.073"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            96..380
                     /locus_tag="RJ266_001446"
     CDS             96..380
                     /locus_tag="RJ266_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HDV7355174.1"
                     /translation="MAVKITDICIVCGSCIDECPVSAIVDDANNPEGEDRYYVYANKC
                     VECVGHNDQPACASACPTDGCIVWSAVESGQPSRDNIGADMRSGDTPVFA"
     gene            493..906
                     /gene="ndk"
                     /locus_tag="RJ266_001447"
     CDS             493..906
                     /gene="ndk"
                     /locus_tag="RJ266_001447"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HDV7355175.1"
                     /translation="MEKTLSIIKPDAVKKGVIGKILDRFESNGLRIAAMKKVQLSKEQ
                     AENFYAVHKERPFFKDLVEFMISGPVVVSVLEGEGAVLKNRDLMGATNPKEAKAGTIR
                     ADFAESIDANAVHGSDSLENAKIEIDFFFKPNEIC"
     gene            907..1260
                     /locus_tag="RJ266_001448"
     CDS             907..1260
                     /locus_tag="RJ266_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355176.1"
                     /translation="MKIPFSKINTKEYPFKLNLENMIFEGNLVKINPKLVKINAIMQG
                     FIYRPCDSCGTELELEIKENLELFASDGIFKDEANELSNTIEFFDGHIDLIEVAISEL
                     EAYLSDYFYCINCNN"
     gene            1284..1430
                     /gene="rpmF"
                     /locus_tag="RJ266_001449"
     CDS             1284..1430
                     /gene="rpmF"
                     /locus_tag="RJ266_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HDV7355177.1"
                     /translation="MAVPKRRVSKTRAAKRRTHYKVSLPMPIKDKDGSYKMPHRANPT
                     TKEY"
     gene            1436..2422
                     /gene="plsX"
                     /locus_tag="RJ266_001450"
     CDS             1436..2422
                     /gene="plsX"
                     /locus_tag="RJ266_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HDV7355178.1"
                     /translation="MINIAIDAMGGDFGEKPIIEGVLKALEAKPFNAILVGNSKILKP
                     LIPKKLEQYIQYEEASEIFSMNENATDALKNKETTIYKAINLLKEKKVDAVVSAGHSG
                     ASMSLATLRLGRLKGISRPAIATLMPNIVNKTLLLDVGANTDCKAENLFQFAIMGEVY
                     AREIMQIQKPRLALLSNGEEECKGNELTKESHQLMKKIPNFIGNAEGRDIFNGEIDVL
                     VCDGFDGNVILKACEGVATAIFQLLKNEVKQSFISKIGALLMKPSFKKLKKHTDWQEY
                     GGAPLLGVNGCVIISHGKSDSRAIKNAIFQAINFSQSHINKLIENELGKYNA"
     gene            2415..3389
                     /locus_tag="RJ266_001451"
     CDS             2415..3389
                     /locus_tag="RJ266_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HDV7355179.1"
                     /translation="MLKASLKSIASYIPEKILSNADLEKMVDTTDEWITRRTGIKERR
                     IASENENSSDLGTKAALKAIERANLKPEDIDAILVATLSPDYFTMPSTACKIASNLGL
                     VNISAFDISAACSGFIYLLEQAKALVESGLKKNVLIVGAEKTSSIMDYNDRSICILFG
                     DGAGAGVVSLDNENHILDVHTASNGNYGDLLMTQRSQKSSLCQTLSMQMKGNEVFKIA
                     VNTLSNDVVEILAKNNILAQEIDLFIPHQANLRIIKAVQEKLNLSDEKCVITVQKYGN
                     TSAASIPMAMNDAYEEGRLKKGNLILLDAFGGGFTWGSALLKFGGENF"
     gene            complement(3386..3736)
                     /locus_tag="RJ266_001452"
     CDS             complement(3386..3736)
                     /locus_tag="RJ266_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDV7355180.1"
                     /translation="MIKRFDECDRMSQIIVFDKYFKTAGQVAFEPSGDIKKQTKEALA
                     ELDALFEKIGASKGDLIQIQIWLANMQDFDAMNEIYDAWIKNYPKPVRACVGSALAEG
                     YLVEIQAFGKLREN"
     gene            complement(3733..4809)
                     /gene="serC"
                     /locus_tag="RJ266_001453"
     CDS             complement(3733..4809)
                     /gene="serC"
                     /locus_tag="RJ266_001453"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HDV7355181.1"
                     /translation="MRKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKV
                     FEEVHFGAQEKAKKLYGLNDDYEVLFLQGGASLQFAMIPMNLALNGVCEYANTGVWTK
                     KAIKEAQILGVNVKTVASSEESNFNHIPRVEFRDNADYAYICSNNTIYGTQYQNYPKT
                     KTPLIVDASSDFFSRKVDFSHIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPS
                     MLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKAAMLYECIDL
                     SNGFYKGHADKKDRSLMNVSFNIAKNKDLEPLFVKEAEEAGMIGLKGHRILGGIRASI
                     YNALNLDQVKTLCEFMKEFQGKYA"
     gene            complement(4819..5982)
                     /locus_tag="RJ266_001454"
     CDS             complement(4819..5982)
                     /locus_tag="RJ266_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HDV7355182.1"
                     /translation="MTPTELNLKAKALLETHFDDIVLSGEISKITLHGSGHWYFDLKD
                     ERSSIACAMFKGANLKVGFKPAVGNFLELCGSVSLYPESGRYQFIATSMKKAGFGDLE
                     AQFLALKERLQKEGLFDPRFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAK
                     IYIFDALTQGNNAPFSLIQALKKADDMDLDVLIIARGGGSREDLFCFNDENLAREIFK
                     AKTPIISAIGHEIDYVISDFVADFRAPTPSAAIDTLFYSKLDIEQSLDLMEEKLMQLW
                     NYKIQNYENLLLNLSKFFKFNSLPKIIDEKIKQSHNIEKQLNHLLANQMRYNELKLDK
                     LQNAYLQHENFFNKSKKFICIRKNGKIANLEDLKSDDIVILSSQTSQKEAKIL"
     gene            complement(5979..6686)
                     /gene="ubiE"
                     /locus_tag="RJ266_001455"
     CDS             complement(5979..6686)
                     /gene="ubiE"
                     /locus_tag="RJ266_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HDV7355183.1"
                     /translation="MQKQEKIIEMFNQIAPTYDKANRILSFGADVAWRKKACQRVMSL
                     YLKKDLKIADIACGTGDMIEIWQESALKMEKNILNIKGIDPSSGMLNVAKEKFPNVEF
                     IEAGAQNLPLESQSLDILSISYGIRNVVERQKALSEFARVLQKDGILVVLEFTKREKG
                     GFIAACRDFYLKNILPSIGGIISKNKSAYEYLPNSIEGFLSKEEFILELKNAGFEILD
                     YKSFSFGVSSMFIAKKL"
BASE COUNT         2392 a         1097 c         1009 g         2361 t
ORIGIN      
        1 tatcaaataa tgtaaatttt tgattatcaa aatttacatt atttaagaat tttatgctaa
       61 aatcttttaa atcttaatat taaaaaggag aaaaaatggc tgtaaaaatt acagatatat
      121 gtattgtttg tggttcttgt attgatgagt gtccagtgag tgctatcgtt gatgatgcta
      181 ataatccaga aggtgaagat agatattatg tttatgcaaa caaatgcgtt gaatgcgtag
      241 gacataatga tcaaccagct tgtgccagtg cttgcccaac agatggatgt atagtttgga
      301 gtgctgtaga atcaggacaa ccaagtcgtg ataatattgg cgctgatatg agaagtgggg
      361 acactccagt ttttgcataa ttttaaaaaa ttaaaaagct agagattcct agctttttct
      421 tttaatttaa ctttctttaa acaaattcaa gtataatttt aagctttatt aaaataagga
      481 gttattacaa agatggaaaa aactttatct ataattaaac ctgatgctgt taaaaaaggt
      541 gttataggaa aaattttaga tcgttttgaa agcaatggat taagaatcgc tgcaatgaaa
      601 aaagttcaac ttagtaaaga acaagctgaa aatttttatg ctgttcataa agaaagacct
      661 ttttttaaag acttggttga atttatgatt agcggtcctg ttgttgtttc tgtactagaa
      721 ggagaaggtg ctgtattaaa aaatagagat ttaatgggag cgacaaatcc taaagaagct
      781 aaagcaggaa caattagagc cgattttgct gagagtattg atgctaatgc tgttcatgga
      841 agtgacagct tggaaaatgc aaaaatagaa attgattttt tctttaaacc aaatgaaatt
      901 tgctaaatga aaatcccttt ttctaagatt aatacaaagg aatatccttt taaacttaat
      961 cttgaaaata tgatttttga gggaaattta gtaaaaataa atcctaagct tgttaaaata
     1021 aatgctatta tgcaaggttt tatctataga ccttgtgata gttgtggaac tgagttagaa
     1081 cttgaaatta aagaaaattt agaacttttt gcaagtgatg gtatttttaa agatgaagca
     1141 aacgaattga gcaatactat agaatttttc gatggacata ttgatttaat agaagttgct
     1201 attagcgagc ttgaagctta tttgagtgat tatttttatt gcataaattg caataattaa
     1261 ttaaatttta taaaggagaa aaaatggcag taccaaagag aagagtgagc aaaactcgtg
     1321 cagctaaacg cagaactcac tataaagtta gtcttcctat gcctataaaa gacaaagatg
     1381 gaagctacaa aatgcctcac cgtgcgaatc caacaactaa ggaatattaa aatcaatgat
     1441 taacattgcc attgatgcaa tgggtggtga ttttggagaa aaacccatta tagaaggcgt
     1501 tttaaaggca ctagaagcaa aaccttttaa cgctatctta gtgggaaatt ctaaaattct
     1561 aaaaccttta ataccaaaaa aattagaaca atatatacaa tacgaagaag ctagtgaaat
     1621 tttttcgatg aatgaaaatg ccacagatgc tttaaaaaat aaagaaacaa ccatatacaa
     1681 agctattaat ttattaaaag aaaaaaaagt agatgctgta gtttcagcgg gtcatagtgg
     1741 agcaagtatg tctttggcta ccttaaggct tggaagactt aaaggtattt caagacctgc
     1801 tattgccact ttaatgccaa atatcgttaa caaaacttta cttttggatg ttggagctaa
     1861 tacagattgt aaagctgaaa atttatttca atttgccata atgggtgaag tttatgctag
     1921 agaaatcatg caaattcaaa aaccacgcct tgctttactt tctaatggtg aagaagaatg
     1981 caaaggtaat gaacttacca aagaaagtca tcagcttatg aaaaaaattc caaattttat
     2041 aggtaatgct gaaggtagag atattttcaa tggtgaaata gatgttttag tctgcgatgg
     2101 ttttgatgga aatgttatct taaaggcttg tgaaggtgtg gcaacagcta tttttcaact
     2161 tctaaaaaac gaagtaaagc aatcttttat ttctaaaata ggtgctttac ttatgaagcc
     2221 atcttttaaa aaattaaaaa aacacacaga ttggcaagaa tatggcggag caccccttct
     2281 tggagttaat ggctgcgtga tcataagtca tggaaaaagc gattctagag ctattaaaaa
     2341 tgcaattttt caagctataa attttagcca atctcatatc aataaactta tagaaaatga
     2401 acttgggaaa tacaatgctt aaagccagtc ttaaaagtat agcttcttat attccagaaa
     2461 aaattttaag caatgctgat cttgaaaaaa tggtagatac caccgatgaa tggatcacta
     2521 gacgcacagg tattaaagaa aggcgcattg ctagtgaaaa tgaaaattct agcgatttgg
     2581 gcacaaaagc tgcattaaaa gccatagaaa gagcaaattt aaaacctgaa gatattgatg
     2641 cgattcttgt agccacttta agtcctgatt attttactat gccttcaacg gcttgtaaaa
     2701 ttgcttcaaa tttaggactt gtaaatatta gtgcttttga tatttcagca gcttgttctg
     2761 gttttatcta tttgcttgaa caagctaaag ccttagtaga aagtggtttg aaaaaaaatg
     2821 ttttaatcgt aggagctgaa aaaacaagtt caattatgga ttacaatgac agaagcattt
     2881 gcatactctt tggagacggt gcgggtgctg gagttgtaag tttggacaat gaaaatcata
     2941 tccttgatgt acatactgca agcaatggta attatggaga tcttttaatg actcaaagat
     3001 cgcaaaaatc aagtctatgt caaacacttt ctatgcaaat gaaaggcaat gaagttttta
     3061 aaatagcagt aaacacgctt agcaatgatg ttgtagaaat tttagctaaa aataacattt
     3121 tagcacaaga aattgatctt tttattcctc atcaagctaa tctacgcatc attaaagccg
     3181 tccaagaaaa actcaatcta agcgatgaaa aatgtgtgat taccgtacaa aaatatggca
     3241 atacttcagc tgcttctata cctatggcaa tgaatgatgc ctatgaagaa ggacgactta
     3301 aaaaaggaaa tctgatctta ctagatgctt ttggcggtgg ttttacttgg ggatctgcgc
     3361 ttttaaaatt tggaggagag aatttttaat tctctcttag ctttccaaaa gcttgaattt
     3421 ctaccaaata accctctgct aaagcacttc ctacacaagc tctaacaggt ttaggataat
     3481 ttttaatcca agcatcataa atttcattca ttgcatcaaa atcttgcata ttagctaacc
     3541 aaatttgaat ttgaatcaaa tctcctttgc ttgcgcctat tttttcaaac aaagcatcaa
     3601 gttctgcaag tgcttctttg gtttgttttt taatatctcc gctaggttca aaagccactt
     3661 gtcctgcagt cttaaaatat ttatcaaaaa caataatttg cgacattcta tcgcactcat
     3721 caaaacgctt tatcatgcat attttccttg aaattctttc ataaattcac acaaggtttt
     3781 tacctgatcc aaattaagcg cattataaat acttgcacga attcctccta aaattctatg
     3841 tcctttaagt cctatcattc cagcttcttc ggcttccttt acaaaaagag gctctaaatc
     3901 tttattttta gcaatattaa aactcacatt cattaaagat ctgtcctttt tatctgcatg
     3961 tcctttataa aatccattac ttaaatcaat acactcataa agcatagcag ctttttgaga
     4021 atttttctca tgtactttat caagtccgcc ttgatttaaa agccaatcca tttcaagatt
     4081 aaacatataa atggcaaagg ttggaggcgt attaaacaag gactgattct cagcatgagt
     4141 caaataattt aacatactag gaatttgttt atttttagat ctttctaaca tatctttacg
     4201 gataaaaata caacttaaac ccgaaattcc agcatttttt tgcactccgc cataaaaaag
     4261 agcaatatgt gaaaaatcta cttttctaga aaaaaaatca ctcgatgcat ccacaatcaa
     4321 aggagtttta gttttaggat aattttgata ttgagtgccg taaatagtat tgttagaaca
     4381 aatataagca taatcagcat tatctctaaa ttccactcta ggaatatgat taaaattact
     4441 ttcctcgcta cttgctacgg ttttaacatt gacacctaaa atttgtgctt ctttaattgc
     4501 tttttttgtc caaactcctg tatttgcata ttcacaaacc ccatttaaag ccaaattcat
     4561 aggaatcata gcaaattgta aacttgctcc accttgtaaa aataatactt cataatcatc
     4621 atttaacccg taaagttttt tagctttctc ttgtgctcca aaatgcactt cttcaaatac
     4681 ttttgtgcgg tgagaaattt ccattataga ataaccccta ccctgataat cacagagttc
     4741 tttttgagct tgctctaaaa tttctaaagg taaagtcgat ggccctgcac tgaaattgat
     4801 ttttctcata atctatcctt ataaaatttt tgcttctttt tgagaagttt gagaacttaa
     4861 aataacgata tcatcactct taagatcttc taaatttgct attttaccat tttttctgat
     4921 acaaataaac tttttgcttt tattaaaaaa attctcatgt tgcaaataag cattttgcaa
     4981 tttatctaat tttaattcat tataacgcat ttgatttgcc aatagatgat ttaattgctt
     5041 ttctatatta tggctttgtt ttattttttc atctattatt tttggcaaag aattaaattt
     5101 gaaaaatttg cttaaattta aaagcaaatt ttcataattt tgtattttat aattccaaag
     5161 ttgcattaat ttttcttcca ttaaatccaa actttgctct atatccaact tagaataaaa
     5221 caaagtatct atagcagctg aaggcgttgg agctctaaaa tctgcaacaa aatcactaat
     5281 aacataatca atctcatgtc ctatggctga aataatagga gtttttgctt taaaaatctc
     5341 tcttgctaaa ttttcatcat taaaacaaaa aagatcttct ctgcttcctc caccacgtgc
     5401 tataataaga acatctaaat ccatatcatc ggcttttttt aaagcttgta taagagaaaa
     5461 aggagcatta tttccttgag ttaaagcatc aaaaatataa atttttgcca aaaaatattc
     5521 tttttggtga ataagtttta acatatcttg caaagcagca gaagtttttg aagtgataat
     5581 gcctactttt ttaggaaatt ttggcaaaga ttttttaaag cgtggatcaa aaagtccttc
     5641 tttttgcaaa cgctctttta aagccaaaaa ctgtgcttcc aaatccccaa aacctgcttt
     5701 tttcatacta gtagcgataa attgataacg accactttca ggatataaac ttacacttcc
     5761 acaaagctct aaaaaattcc ccacagctgg tttaaatccg acttttaaat tagctccttt
     5821 aaacatagca caagcaatgc ttgatctttc atcttttaaa tcaaaatacc aatgccctga
     5881 accatgcaaa gtaatttttg aaatttctcc acttaaaact atatcatcaa aatgtgtttc
     5941 taataaagcc tttgctttaa gatttaattc tgttggtgtc atagtttttt tgctataaac
     6001 attgaactca cgccaaagct aaaactttta taatcaagta tttcaaaacc agcattttta
     6061 agttctaaga tgaactcttc cttacttaaa aatccttcaa tagagtttgg caaatactca
     6121 taagcacttt tatttttact gattatccca cctatacttg gtaaaatatt tttaagataa
     6181 aaatctctac aagctgctat aaatccaccc ttttctcttt ttgtaaattc caaaactacc
     6241 aaaataccat ctttttgaag tactctagca aattcactta aggctttttg tctttctaca
     6301 acattgcgaa tgccataact aatgcttaaa atatctaaac tttgactttc taaaggtaaa
     6361 ttttgcgccc ctgcttctat aaattcgaca tttggaaatt tttcttttgc aacatttagc
     6421 atgccactac ttggatcaat acctttaata tttagaatat ttttttccat ttttaaagca
     6481 ctctcttgcc aaatctctat catatcccct gtgccacagg caatatcagc gatttttaaa
     6541 tcttttttta aatacaaact catcactctt tgacaagctt ttttgcgcca cgctacatca
     6601 gctccaaagc ttaaaattct attcgcctta tcataagtag gtgcaatttg attaaacatt
     6661 tctataattt tttcttgttt ttgcattttt atcctttgta aattttcaaa tttttacttg
     6721 attttttaag caatttgcaa aatttatttt tattattgat tattttcgaa aaaatatttt
     6781 tatccctatc tttgcaatat ttttcataaa gtttgtttaa attttttatc tctaaaaaac
     6841 gataaaaata ttctaaaaa
//
LOCUS       DAPIWB010000073         6253 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.074, whole genome shotgun sequence.
ACCESSION   DAPIWB010000073 DAPIWB010000000
VERSION     DAPIWB010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6253)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6253)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6253
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.074"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..294
                     /locus_tag="RJ266_001456"
     CDS             <1..294
                     /locus_tag="RJ266_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355184.1"
                     /translation="LCTLALFLPFINIFVYYLAFYYLFHKLLMIDVTSTILDKESFKN
                     FHSDFSPLEFKFSTLCFYLLSSVPLLGLFLQVFFVIFLTHLGYQRILKLEAKA"
     gene            complement(277..1242)
                     /gene="tilS"
                     /locus_tag="RJ266_001457"
     CDS             complement(277..1242)
                     /gene="tilS"
                     /locus_tag="RJ266_001457"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HDV7355185.1"
                     /translation="MQIKDEILALLKRGKNLLAFSYGSDSSVLFYLLMQEKIDFDLVM
                     INYKTRKNSDLEELKAKELALKFHKKIFIKHSPKFQSNFEKKARDFRYDFFEKICLEQ
                     GYDHLILAHHLNDQFEWFLMQLSRGAGLAEILGMQECEKRPNYTLLRPLLFISKDEIS
                     SFLKEKDIFYFHDESNENEKYFRNYIRKNFSNAFVSEFHQGLKRSFSYLDEDRKKLYD
                     FKNIKEIQGLLICPKNESLIARAVKMKGLLLSTAQRKELLKGDCVLGGKIALAYKNEQ
                     AIVFEYETCQKLPKNFKEECRIAKIPRLLRAYLYNHKIDISSLSF"
     gene            complement(1232..2551)
                     /gene="rimO"
                     /locus_tag="RJ266_001458"
     CDS             complement(1232..2551)
                     /gene="rimO"
                     /locus_tag="RJ266_001458"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HDV7355186.1"
                     /translation="MSKLYLMSLGCNKNLVDSEIMLGRLSAYELCDEPSKADVLIVNT
                     CGFIDSAKKESINAILDLHEQRKKDSLLVVTGCLMQRYREELMKELPEVDLFTGVGDY
                     ERIDEMILKKTNLFSNSTYLQSENSKRIITGSNSHAFIKIAEGCNQKCSFCAIPSFKG
                     KLKSREISSIIAELKDLVARGYKDFSFIAQDTSSYLFDKGEKDGLIRLIDEVEKIKGI
                     RAARILYLYPTSASEALIKRIIASEIFVNYFDMPLQHISDNMLKIMKRGANSTRLKEM
                     LNLMKSTPNSFLRTGFIVGHPGESEADFEELCEFVKDFGFDRVSVFAYSKEEDTAAFD
                     MEQVPFKVINKRLKIIEKIVDEVIEKSFEKEVGQKRLVVCTGESSEGEFFIAAKDLRW
                     DREIDGEILINESECGNLEMGQIYECEILQNLDKKLLAKALRKVDAN"
     gene            2625..3722
                     /gene="prfB"
                     /locus_tag="RJ266_001459"
     CDS             2625..3722
                     /gene="prfB"
                     /locus_tag="RJ266_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HDV7355187.1"
                     /translation="MDNYEFSELLKTLKNKVGNIASIIKPENIQTRLKEIEELENSPS
                     FWSDVKQAGIIGKEKTKITNLLKNYENAFNALNDASELFDLANSENDTETLEALFNDA
                     PKLEDTITSLEISMLLSGENDGKNAIVSIHPGAGGTESNDWASILYRMYLRFCEREGF
                     KVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFSS
                     VMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQND
                     RSQHKNKATAFKMLKSRLYELELMKQQDSANTGEKSEIGWGHQIRSYVLFPYQQVKDN
                     RSGEAFSQVDNILDGDIKKMIEGVLIALKAE"
     gene            complement(3880..4086)
                     /locus_tag="RJ266_001460"
     CDS             complement(3880..4086)
                     /locus_tag="RJ266_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002927569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355188.1"
                     /translation="MFDLGNQEIMKKYPNYKLYDYTSVRTISDINNPEGKIKEMKRDL
                     EIDKTPYSNYVFLLNPNDKKTIKL"
     gene            complement(4316..5434)
                     /gene="truD"
                     /locus_tag="RJ266_001461"
     CDS             complement(4316..5434)
                     /gene="truD"
                     /locus_tag="RJ266_001461"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HDV7355189.1"
                     /translation="MNLEEENTIFKPLYSLKHSPINAYFSKNSDDFVVRERPLYEFSG
                     KGEHLILHINKKDLTTNEALKILSATSGVKIRDFGYAGLKDKQGSTFQYLSMPKKFES
                     FLSNFSHPKLKILEIFTHENKLRIGHLKGNTFFIRLKKVLPSDALKLEQALMNLDKQG
                     FANYFGYQRFGKFGDNYKEGLEILRGKKMKNVKMKEFLISAFQSELFNRYLSKRVELS
                     HFANDFSEKELIQIYKISKEEAKELKKQEQFFKLLKGEVLGHYPFGKCFLCEDLSAEL
                     RRFKARDISAMGLLIGAKAYETGEGLALNLENEIFKDTLEFKAKMQGSRRFMWGYLEE
                     LKWRYDEEKAHFCIEFFLQKGSYATVVLEEILHKNLFE"
     gene            complement(5403..6224)
                     /locus_tag="RJ266_001462"
     CDS             complement(5403..6224)
                     /locus_tag="RJ266_001462"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HDV7355190.1"
                     /translation="MNKEDFIIKAFLNEKNGDDGAIIDDWCFSKDLFFENVHFKREWF
                     SLEQIATKAMLVNISDAISMNAVPKYALLGLALPKNLSENEIKALQKGFLKTARKFNI
                     KIIGGDTISNDKIDISLTIISKINDKAVFRKGLKKGHLLAYTGKLGRSLKGLEILQNG
                     GTLKPNHVFIKPKLRASFFYEIAPLISCAMDISDGLSKDLSRLLALNKCGISWFKKLD
                     DYALYSGEEYEILFAFDEKERQNIETIAKKHGVKLNIFGKAVKGKYEFRGREHHF"
BASE COUNT         2089 a         1146 c          806 g         2212 t
ORIGIN      
        1 ctttgcacct tggctttatt tttacctttt ataaatattt ttgtatatta tcttgctttt
       61 tattatctct ttcacaaact tttaatgatt gatgttacaa gcacgatttt agacaaagaa
      121 agttttaaaa attttcattc tgatttttcg cctttagaat ttaaatttag cactctttgt
      181 ttttatctac tctcatcagt accactttta ggactttttt tgcaagtgtt ttttgtgatt
      241 tttcttacac atttaggcta tcaaagaatt ttaaaattag aagctaaggc ttgaaatatc
      301 gattttgtga ttgtataaat aagctcttaa aagtcttgga attttagcta ttctacactc
      361 ttctttgaaa tttttaggta atttttgaca agtttcatac tcaaaaacaa tagcttgttc
      421 gtttttatat gcaagtgcta ttttaccacc taaaacacaa tcacccttta aaagctcttt
      481 tctttgtgcc gtgcttaaaa gcaaaccttt cattttcacc gctctagcaa tcaagctttc
      541 atttttaggg caaataagaa gtccttgaat ttctttgata tttttaaaat cataaagttt
      601 tttcctgtct tcatcaagat aagaaaaact tctttttaaa ccctgatgaa attcactcac
      661 aaaggcatta gagaaatttt ttcttatata atttctaaaa tatttttcat tttcattact
      721 ttcatcatgg aaataaaaaa tatctttttc ttttaaaaaa gatgaaattt catctttact
      781 tataaagagt aaagggcgta aaagtgtata atttgggcgt ttttcacact cttgcatacc
      841 taaaatttca gccaaacctg cgcctcgtga aagttgcatc aaaaaccatt caaattgatc
      901 gtttaaatga tgggctaaga taagatggtc ataaccttgc tcaagacaaa ttttttcaaa
      961 aaaatcatag cgaaaatctc tggctttttt ttcaaagtta ctttgaaatt taggagagtg
     1021 ttttatgaaa atttttttat gaaattttaa agcaagttct ttggctttta actcttctaa
     1081 atcactattt tttctagttt tgtaatttat catcacaaga tcaaagtcga tcttttcttg
     1141 cattaaaaga taaaaaagca cactagaatc acttccataa gaaaaagcga gtaaattttt
     1201 accccttttt aaaagggcta aaatttcatc tttaatttgc atctactttt cttaaagcct
     1261 tagcaaggag ttttttatca aggttttgta aaatttcaca ttcataaatt tgccccattt
     1321 ccaaatttcc acattcgctt tcattaataa gaatttcccc atcaatctct ctatcccatc
     1381 ttaaatcttt agctgcgata aaaaactctc cctcgctact ttctcctgtg caaactacta
     1441 aacgcttttg ccctacttct ttttcaaaac ttttttctat cacttcatca acaatttttt
     1501 ctatgatttt aagcctttta ttgatcactt taaaaggcac ttgctccata tcaaaagcgg
     1561 ctgtatcttc ttccttagaa tacgcaaaaa cactcaccct atcaaaacca aagtctttaa
     1621 caaactcaca aagctcttca aaatctgcct cactttcacc tggatgccct acgataaagc
     1681 ccgtgcgtaa aaagctattt ggcgtacttt tcattaaatt tagcatttct ttaagtcttg
     1741 tgctatttgc cccacgcttc atgattttaa gcatattatc acttatgtgc tgcaaaggca
     1801 tatcaaaata atttacaaaa atttcagaag ctataatgcg tttgatcaaa gcttcactcg
     1861 cgctcgtagg ataaagatat aaaattctag ccgctcttat gcctttgatt ttttccacct
     1921 catcgattaa gcgtataagc ccatcttttt cacccttatc aaacaaataa gaactcgtat
     1981 cttgtgcaat aaaagaaaag tccttataac ctctagctac caaatcttta agctcagcta
     2041 taatgctact tatctcgcga gattttaact tgcctttaaa acttgggata gcacaaaaag
     2101 agcatttttg attacaacct tcggcaattt ttataaaagc atgggaattt gaacctgtga
     2161 taatacgttt agaattttca ctttgcaaat aagtcgaatt tgaaaataaa tttgtttttt
     2221 taagtatcat ttcatcgatt ctttcataat cacccacacc tgtgaaaaga tcaacctcag
     2281 gaagttcttt cataagttct tcgcggtaac gctgcatcaa acaacccgta accaccaaaa
     2341 gagaatcttt ttttctttgt tcgtgcaaat ccaaaatcgc attaatactt tctttttttg
     2401 cactatcgat aaaaccacaa gtatttacga ttaaaacatc agctttgctt ggttcatcgc
     2461 aaagttcata agcactaagg cgccctagca tgatctcact atcgactaaa tttttattac
     2521 aacctaaaga cataagataa agttttgaca tttttttcct atattaaagt tttcttttga
     2581 tataattttt gactttaaaa atataattat agcaaagaaa ttttatggat aattacgaat
     2641 ttagcgaact tttaaaaact ttaaaaaaca aagtcggcaa catagcctcc atcatcaagc
     2701 ctgaaaatat ccaaacaagg cttaaagaaa tcgaagagct tgaaaattct ccttcttttt
     2761 ggagtgatgt taaacaagca ggaatcatag gtaaagaaaa aactaaaatc accaatctac
     2821 ttaaaaacta tgaaaatgct tttaatgctc taaatgacgc aagcgaactt ttcgatctgg
     2881 ccaatagcga aaacgataca gaaacacttg aagctttatt taatgacgca ccaaaacttg
     2941 aagataccat cacaagtctt gaaatttcca tgcttttaag cggggaaaat gatggtaaaa
     3001 atgccattgt ttccattcac ccaggtgcag gtggaacgga aagtaatgac tgggcaagca
     3061 tactttatag aatgtattta agattttgtg aaagagaagg ttttaaagtc gaaactttag
     3121 actttcaaga aggcgaagaa gcaggactta aagatgtgag ctttttagtt aaaggagaaa
     3181 atgcttatgg ttatttaaaa gctgaaaatg gtatccatcg tttggtaaga acttctcctt
     3241 ttgatagtgc aggacgccgt catacaagct tttcaagtgt tatggtaagc cctgaacttg
     3301 atgatgatat agaaattgaa atcgaagaaa aagacataag aatagattat tacagagcaa
     3361 gcggtgcagg cggacaacat gtcaataaaa cagaatcggc tgtgagaatc acgcattttc
     3421 caaccggcat agtcgtacaa tgccaaaatg acagaagtca gcacaaaaac aaagccaccg
     3481 cttttaaaat gctaaaatct cgcctttatg aacttgaact catgaaacaa caagatagtg
     3541 ctaatactgg agaaaaaagc gagataggtt gggggcatca aatccgttct tatgtgcttt
     3601 tcccttatca gcaagtcaaa gacaatcgca gcggagaagc tttttctcaa gtggataata
     3661 tccttgatgg ggatatcaaa aaaatgatag aaggcgtttt aattgcctta aaagcggagt
     3721 aacaggctta aaaataagta atttctgcaa aatgtcggta taaaaaaatt agaaagatag
     3781 cgggattttc ccgcttgttt tattatcttg cataaaacct aagagcatca ttcacagaat
     3841 aataaactct tttcttaaaa tctttatcgc aataaacact cacaacttta tagtcttttt
     3901 atcgtttgga tttaataaga aaacatagtt tgagtatgga gttttatcta tttctaaatc
     3961 acgcttcatt tctttaattt tgccttctgg attgttaata tcactaattg ttctgactga
     4021 agtataatca taaagtttat aatttggata ttttttcata atctcttgat tacctaaatc
     4081 aaacatagct tgatcgttgc cattgttttt ttactcgact aaatcgccat cgccacaatc
     4141 tacaatcaaa gtcatagctc ctaaagccaa agcacttgtt aaaatctttt tcattatttt
     4201 tgctcctagt tttaaaatta aattaatata actataccta aatttaaaat ttaaatatca
     4261 tttttgcaat aaattctaaa gtaaaaatca cgtaaaaatt taactcataa ttatttcact
     4321 caaacaaatt tttatgcaaa atttcttcta aaaccacagt agcataagag cctttttgca
     4381 agaaaaactc tatacaaaaa tgagcttttt cttcatcata acgccatttt aactcttcta
     4441 aatatcccca cataaagcgt cttgaacctt gcattttagc cttaaactcc aaagtatctt
     4501 taaaaatttc attttctaaa tttaaggcca aaccttctcc tgtttcataa gccttagcac
     4561 cgattaaaag ccccatggcg cttatatctc ttgccttaaa acgcctaagc tcagcactta
     4621 aatcctcgca taaaaaacac tttccaaaag gataatgccc taaaacctca ccttttaaaa
     4681 gcttaaaaaa ttgttcttgt tttttaagtt ccttagcttc ttctttagaa attttataaa
     4741 tttggatcaa ttctttttcg ctaaaatcat ttgcaaaatg tgataactcc actcttttac
     4801 tcaaatagcg attaaaaagc tcactttgaa aagctgaaat taaaaactct ttcattttta
     4861 catttttcat ttttttgcca cgcaaaattt caagcccttc tttataatta tccccaaatt
     4921 ttccaaaacg ctgataacca aaataattcg caaaaccttg cttatccaaa ttcatcaaag
     4981 cttgttctag ttttaaagca tcgcttggta aaactttttt taagcgtatg aaaaaagtat
     5041 ttccttttaa atgccctatt cttagcttgt tttcatgggt aaaaatttct aaaattttaa
     5101 gtttaggatg agaaaaattt gacaaaaaac tctcaaattt tttaggcata gaaaggtatt
     5161 gaaaggttga tccttgctta tctttaagcc ctgcataacc aaaatctctt attttaaccc
     5221 cgcttgttgc gcttaaaatt tttaaagctt catttgtggt taaatctttt ttattgatat
     5281 gcaaaataag atgttcaccc ttaccgctaa attcatacaa aggcctttca cgcactacaa
     5341 aatcatcgct atttttacta aaatacgcat taataggact gtgttttaaa ctatacaaag
     5401 gcttaaaaat ggtgttctct tcctctaaat tcatattttc ctttcaccgc ttttccaaag
     5461 atatttaatt tcacgccgtg ttttttggct attgtttcta tattttgccg ttctttttca
     5521 tcaaaagcaa acaaaatttc atattcttct ccgctataaa gcgcataatc atcaagtttt
     5581 ttaaaccaag aaataccgca tttatttaaa gctaaaagcc ttgataaatc cttgcttaaa
     5641 ccatctgaaa tatccatagc acaagaaatt aaaggtgcga tttcataaaa aaaactagct
     5701 cttaattttg gctttataaa tacatggttt ggttttaaag tgcccccatt ttgtaaaatt
     5761 tcaagccctt ttaaacttcg tcctaatttt cccgtataag caagtaaatg tccctttttt
     5821 aaaccttttc taaaaacagc tttatcgtta atctttgaaa tgatagtaag actaatgtct
     5881 attttatcat tgcttatagt atcaccgcct atgattttta tattaaattt cctagctgtt
     5941 tttaaaaaac ctttttgcaa ggctttgatc tcattttcgc ttaaattttt tggtaaagca
     6001 agtcctaaaa gtgcgtattt tggtacagca ttcattgaaa tagcatctga gatattaaca
     6061 agcattgctt ttgtagcaat ttgctctaag ctaaaccact ctcttttaaa atgcacattt
     6121 tcaaaaaaca aatccttact aaaacaccaa tcatcaataa tagctccatc atcaccattt
     6181 ttttcattta aaaaagcttt gataataaaa tcttctttgt tcataatgcg tgattttata
     6241 aaatttcctt tta
//
LOCUS       DAPIWB010000074         6155 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.075, whole genome shotgun sequence.
ACCESSION   DAPIWB010000074 DAPIWB010000000
VERSION     DAPIWB010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6155)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6155)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6155
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.075"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(5..808)
                     /locus_tag="RJ266_001463"
     CDS             complement(5..808)
                     /locus_tag="RJ266_001463"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HDV7355191.1"
                     /translation="MENLYALILGIIEGLTEFLPISSTGHMILGTTILGIDIDEFWKS
                     FLIIIQLGSILAVIFVFWRKLFQGLDIWLKLAVGFFPTGVIGLFVAKYLNALFNGWVV
                     VGMLIFGGVVLILIELAHKNKQYRINFLEEISFKQAFCIGIFQSLAMIPGTSRSGASI
                     IGGLLLGFNRKVAAEFSFLLAIPTMIIATAYSIYKEPELLSNANSLIPLAIGFITAFV
                     VAVLVIKFFLKFISKFDFIPFGIYRIILGFLFFYLYYSGILNAGSEFKL"
     gene            complement(882..2879)
                     /locus_tag="RJ266_001464"
     CDS             complement(882..2879)
                     /locus_tag="RJ266_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HDV7355192.1"
                     /translation="MMYKKQNLPELTLRGLILGSILTIIFTASNVYLGLKVGLTFSSS
                     IPAVVISMAVLSLFKTSNILENNMVQTQASAAGTLSSVIFVIPGLFMCGYWSEFPLWQ
                     TFMICLCGGGLGVLFTIPLRRTMVVESKLAYPEGRAAAEILKVANKDQSSKKGKQGIK
                     EIALGSFIAAIFSLLSNGFKLAASESNFAFIWNKMAFGFSMGYSLALLGAGYLVGLAG
                     AIALFVGMFLAWGIFTPYLSNFEFDSAKNAVDLASSVWSSKVRLIGTGAIAIAALWTL
                     IELLKPVIEGIKEIVKNVKITNQEKNERTNIDLSLKSIFILFVLMVVGLFITFYSFVE
                     DANLSIYYQMLFSFVGTLVSVLIGFFVAAACGYMAGLVGSSSSPISGIGLIGVIISSI
                     VFLVLGVELFQDPMLSKFAVALAIFTTSVILATAAISNDNLQDLKTGHLVGATPWKQQ
                     VALLVGCVFGALAIVPVLNLLYQAYGFVGAMPREGMDASSALAAPQANLMSTIAQGIF
                     HHNIEWGYMAFGVFVGILMIIIDKILRRTQKMSLPPLAVGIGIYLPPAVNIPLVIGGI
                     LKYIVMQHLTKKYAKNSHKEEKLASCEQRGTLFASGLIVGESIFGVIIAGITVFSVSM
                     GGSENPLALNLANFHDSELFALIFFVGVVLYFIKRIVKKDA"
     gene            complement(3062..4408)
                     /locus_tag="RJ266_001465"
     CDS             complement(3062..4408)
                     /locus_tag="RJ266_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate transporter"
                     /protein_id="HDV7355193.1"
                     /translation="MEIFLALLGFFSLGLIVWLLLKDYTTPALAFISVSISVACILLI
                     LERLGFGVGVALGVKGGVFDIKTLVVFIKDGVKSVTDTAALFVFSILFFSVLNASGFF
                     TKILNAFLSKMKANVYQVCILTVFIAAAVHLDGSGASTFLIVIPALLPIYERLGIRKT
                     SMLLIITSAMGVMNVIPWGGPTLRAATNIGMDANLLWHHIIPIQIVGLVLSLLLAIWI
                     AKIEIKRGAGAGNLSGINLNIEKSEHHNEKWFWLNLLVAIGVIGLLISGIIPSYICFM
                     IGLAIILPLNYPNLKTAKKVLDRASAGAMLMYITLIGAGILIGVFDKSGIMEKMGVLI
                     LNFVPDYLGAYIPLMVGILAVPMAIIFCTDSYFYGVMPIVLSVTKAFGAEPLTIAIIM
                     VIARNCATFISPVVPATLLGCGLAEVNIKDHIKRSFFYIWGISIICLIFAEVVGII"
     gene            4651..4992
                     /locus_tag="RJ266_001466"
                     /pseudo
     CDS             4651..4992
                     /locus_tag="RJ266_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851872.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4878 domain-containing protein"
     gene            4976..5548
                     /locus_tag="RJ266_001467"
     CDS             4976..5548
                     /locus_tag="RJ266_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355194.1"
                     /translation="MFYLNKILYFFLILFLLIGILGFFINSNPSNQIIKKPYLPFLEI
                     GDLVFRAGIGSESFLIENLSQSPYSHIAMVVKTSPTILIHATTDDDKNAKNQVILSSM
                     DDFLKLSHKIAIKRLKFDEKTKQKIVAKALEHLGRKFIISTDKDAFYCTTFLEQSINS
                     ITPFHLQYTLIKAPFNEGLYLFPQAFFENN"
     gene            5647..5994
                     /locus_tag="RJ266_001468"
     CDS             5647..5994
                     /locus_tag="RJ266_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355195.1"
                     /translation="MKKSILFASALLTGSMLFADSLKLEGTIAQIYDNNKTLLIDSIY
                     GGQMAIKVLPNTEIEMDDCGIFGTDKDGTFKDLQVGNFLESKISYGAPATPNTQAIPV
                     ARKIEIQCYKKAY"
BASE COUNT         2424 a         1104 c          748 g         1879 t
ORIGIN      
        1 ttatttatag cttaaattca cttccagcat ttaaaatccc gctataatac aaataaaaga
       61 aaagaaatcc caaaataatg cgataaattc caaaaggaat aaagtcgaat ttagaaataa
      121 attttaagaa aaattttata actaaaaccg caacaacaaa agcagtaata aaacctatgg
      181 ctaaagggat taaagaattt gcattgctaa gaagctcagg ctctttataa atgctataag
      241 ctgtagcgat aatcatcgtt ggaatggcaa gcaaaaaact aaactcagcc gcaacttttc
      301 tattaaatcc tagcaaaagc ccaccaataa tacttgctcc acttcttgaa gtgccaggaa
      361 tcatggctaa agattgaaaa atacctatac aaaaagcttg tttaaaactt atttcttcta
      421 agaaattgat acgatattgt ttatttttgt gcgcaagttc tataagaata agcacaacac
      481 caccaaaaat gagcattcca accacaaccc aaccattaaa taaagcattt aagtattttg
      541 ccacaaaaag ccctataact ccagtaggaa aaaatcccac tgcaagtttt aaccaaatat
      601 caagcccttg aaacaattta cgccaaaata caaaaatgac cgccaaaata gaaccaagct
      661 ggatgataat caaaaagctt ttccaaaact catctatatc gatacctaaa atagtcgtac
      721 ctaaaatcat atgtcctgtt gaagaaatag gtaaaaactc agtcagacct tctataattc
      781 caagtattaa agcatataaa ttttccattt taatccttga atgataattg caaaagaaaa
      841 attatatcag aatggattaa atggggtttt aaccccaaaa attaagcatc ttttttaaca
      901 atacgcttaa tgaaatataa tacaactccc acaaaaaaga taagtgcgaa aagctcgcta
      961 tcatgaaaat ttgctaaatt taaagctaaa ggattttcac taccacccat acttactgaa
     1021 aatacagtaa ttcctgcgat aattacccca aaaatacttt cacccactat aagccctgaa
     1081 gcaaaaagcg tgcctctttg ctcacaactt gcaagttttt cttctttatg agaatttttt
     1141 gcatattttt tagtcaagtg ttgcattaca atatatttta aaattccgcc tataactaaa
     1201 ggtatattta cagcaggggg aaggtaaata cctattccaa cggctaaagg cggcaaagac
     1261 attttctgtg ttcttcttaa aattttatct ataataatca ttaaaattcc tacaaataca
     1321 ccaaaagcca tataacccca ctctatattg tgatgaaaaa ttccttgggc gatagtgctc
     1381 attaaatttg cttgcggtgc tgctaaagct gatgaagcat ccataccttc tcttggcatt
     1441 gctccgacaa aaccataggc ttgataaagc aaatttaaaa caggaactat agccaaagca
     1501 ccaaaaacac agcctacaag taaagcaact tgttgtttcc aaggagtagc tccgactaaa
     1561 tgtcctgtct ttaaatcttg taaattatca ttcgaaatag cagctgtagc taaaataaca
     1621 ctagtagtaa aaatagctaa tgctactgca aatttagaaa gcataggatc ttgaaaaagt
     1681 tccacaccta aaaccaaaaa aacaatagaa gaaataataa caccaataag tccgattcca
     1741 gaaataggac tagaagaaga tcctacaagt cctgccatat atccgcaagc tgctgcaaca
     1801 aaaaaaccta ttaaaacaga aactaaagtt ccaacaaatg aaaatagcat ttgataataa
     1861 atacttaagt tagcatcttc aacaaaacta taaaaagtaa taaataaacc cacaaccatt
     1921 aaaacaaaaa gtataaaaat actttttaaa gaaaggtcta tatttgttct ttcatttttt
     1981 tcttgattag taattttaac atttttaaca atttctttaa taccctcaat aacgggtttt
     2041 aaaagttcta ttaaagtcca aagcgctgct atagcaatag ctcctgttcc tataagcctt
     2101 actttagaac tccatacact agaagctaaa tctacggcat tttttgcact atcgaattca
     2161 aaatttgaaa gatagggagt aaaaataccc caagctaaaa acatacctac aaaaagagct
     2221 atagcacctg ctaaaccaac taaataacct gcccctaaaa gtgccaaaga atatcccata
     2281 gaaaaaccaa aagccatttt attccaaata aaagcaaaat tactctcact tgcagcgagc
     2341 ttgaaaccat tgcttaacaa actaaaaata gcagctataa aagagcctaa tgctatttct
     2401 ttaatgcctt gttttccttt tttactactc tgatctttat tggctacttt taaaatttca
     2461 gctgcggctc taccttcagg ataagcaagc ttgctttcaa ccaccatagt ccttcttaat
     2521 ggtatagtaa aaagcactcc aagtccgcca ccacaaagac atatcataaa agtttgccaa
     2581 agtggaaatt cactccaata cccacacata aaaagccctg ggataacaaa aataactgat
     2641 gataaagttc ctgctgctga agcttgagtt tgaaccatat tattttctaa aatatttgaa
     2701 gtcttaaaaa gactcaaaac cgccatggag atgaccacag ctggaattga tgatgaaaaa
     2761 gtaagtccca cttttaaccc caaatataca tttgaagctg taaaaataat agttaaaata
     2821 cttcccaaaa tcaaacccct taaggtaagt tctggtaaat tttgtttttt gtacatcatt
     2881 tctccgtttt aaaatttact ttcaacttaa aaaatattct tataagttta aatttataat
     2941 ttttctctaa agcaaaataa aataatacaa aaaaacgctt atatttttat aaatttttga
     3001 ctcaaaaata tcataaaaca atgaaccaat cattgaaaaa tcaaaagttc ttttatttta
     3061 attatattat cccaactacc tcagcaaaaa tcaagcaaat aatacttata ccccatatat
     3121 aaaaaaagct tcttttgata tgatctttaa tattaacctc tgctaaacca caacctagca
     3181 aagttgcagg cacaacagga gaaataaatg tcgcacaatt tcttgctatc accatgataa
     3241 tagctatagt caaaggttca gcgccaaaag ccttagttac actcaaaact ataggcatca
     3301 ctccataaaa ataagaatct gtacaaaaaa taattgccat tggaacagcc aatatcccta
     3361 ccatcaaagg aatataagcg cctaaataat ctggaacaaa atttaaaatc aaaacaccca
     3421 ttttctccat aataccactt ttatcaaata cgcctattaa tatcccagca ccaattaaag
     3481 taatatacat aagcattgca ccagcacttg cacgatctaa aactttttta gctgttttta
     3541 aattaggata attaagcggt aaaattattg caagtcctat cataaagcaa atataactag
     3601 gaataatacc gctaattaaa agcccaataa ctccaatagc tacaagtaaa tttaaccaaa
     3661 accatttttc attatggtgt tcgctttttt ctatatttaa atttattcca gacaagttac
     3721 ctgcgcctgc acctcttttt atttctatct tagcaatcca aattgccaaa agaagggata
     3781 ataccaaacc tacaatctga ataggtataa tatggtgcca aagcaaattt gcatccattc
     3841 ctatattagt agccgctctt aaagtaggac caccccaagg aataacattc ataaccccca
     3901 tagccgaagt aataatcaat aacattgaag tctttcttat acctaaacgc tcataaatag
     3961 gtaataatgc aggtattaca ataagaaaag tagaagcacc tgaaccatct aaatgcacag
     4021 cagcagcaat aaaaacagta agaatgcaaa cttgatatac attagctttc atttttgata
     4081 aaaatgcatt taaaatttta gtaaaaaaac cacttgcatt taaaacacta aaaaagagta
     4141 tagaaaaaac aaacaaagct gccgtatccg ttacgctttt gactccatct ttaataaaaa
     4201 caaccaatgt tttaatatca aaaacacctc ctttaacccc taaagctaca cccacgccaa
     4261 aaccaagccg ttcaagaata agtaaaatac aagctacact aatacttaca cttataaaag
     4321 ctaatgctgg agtagtataa tcttttagca aaagccaaac tatcaatcct aacgagaaaa
     4381 aacccaataa agctaaaaaa atttccatat cctatccttt tgtatcattt ttattcgata
     4441 ataaaatagg atattttaac tccaacttat atgtgtttaa atttatagct ttttaaaaaa
     4501 atatattttc taatgtaacc attataaaca agaataaaaa aataattttg aattattttg
     4561 ctataattat gaatatttta atttatacta tcaaaagaaa aaaatgaaat tttttaaact
     4621 ttctttcttg gctttagttg ccttttttta gtggcttgag gttcttcaaa tcctgaagat
     4681 ttagctaaaa attttacaaa agatctttac agtggtgata ctaaatctgt tatgagttac
     4741 attgatctta gcgaagctaa aagcgatgaa gaaaaaacat ttgttagtga taaaatcact
     4801 caagttgttg ctgaaaatgc agccaaagca aaaagaatgg gtggtgttaa agatattcaa
     4861 attgaagaaa aaacaatcaa taaagattct gctaaaatca gagttttagt gttatttaac
     4921 aatgataata atcaaagcag caatgttttt cttgctaaaa aagatagaaa atggcttgtt
     4981 ttacttaaat aaaattttat attttttctt aattttattt ttattgattg gaattttggg
     5041 tttctttata aattccaatc cttcaaatca aatcatcaaa aaaccctatc taccttttct
     5101 tgaaataggt gatcttgtct ttcgtgcagg aataggaagt gaaagttttt taatagaaaa
     5161 tttaagtcaa agcccttatt ctcatatcgc tatggtagtt aaaacttctc caactatact
     5221 catacatgct acaacagatg atgacaaaaa tgctaaaaac caagttatct taagctctat
     5281 ggatgatttt ttaaaactga gtcataaaat tgctattaaa agattaaaat ttgatgaaaa
     5341 aaccaaacaa aaaatagttg ctaaagcttt ggaacattta ggcagaaaat ttatcataag
     5401 tacagataaa gatgcttttt actgcactac ttttttagaa caatctatta actccattac
     5461 cccatttcat cttcaatata ctctaatcaa agctcctttt aatgaaggtt tatatctttt
     5521 tccacaagct ttttttgaaa ataattaaag cgtattaatt ttatgaaagt caaaaatttt
     5581 taatttcaca ttcacttcac ttaaaaattt tataatgtca tcactttaca ttaaggagaa
     5641 ataattatga aaaaaagtat tttattcgca tcagcacttt taactggctc aatgcttttt
     5701 gcagatagtc taaaacttga aggtactatt gcacaaattt atgataacaa taaaacctta
     5761 cttattgact caatttatgg cggacaaatg gctataaaag ttctaccaaa taccgaaata
     5821 gaaatggatg attgtggtat ttttggaaca gataaagatg gaacttttaa agatttacag
     5881 gttggaaatt ttttagaaag taaaatttct tatggagcac ctgctacacc aaatactcaa
     5941 gctattccag tagctagaaa aattgaaatt caatgttata aaaaagctta ttaatataaa
     6001 tcccttaaca agggatttat aaaaatcatt ctttactaaa ctacttcatt actcttaaat
     6061 aaaaatttaa actctttttt aacaagcaat ttataaaata acacttatat tttcatccaa
     6121 ggcaaataat gaaaaaatgg atttttattg ttttt
//
LOCUS       DAPIWB010000075         6150 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.076, whole genome shotgun sequence.
ACCESSION   DAPIWB010000075 DAPIWB010000000
VERSION     DAPIWB010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6150)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6150)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6150
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.076"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            27..476
                     /locus_tag="RJ266_001469"
     CDS             27..476
                     /locus_tag="RJ266_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HDV7355196.1"
                     /translation="MSVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAY
                     EEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYL
                     LAEFKKLNEAAEKESDTTTAAFAQENIAKYEKSLWMIGATLQGACKM"
     gene            541..1578
                     /locus_tag="RJ266_001470"
     CDS             541..1578
                     /locus_tag="RJ266_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7355197.1"
                     /translation="MKVLNFFYENHPKFEVSYERKNQISKPNIIIKGPRFCGKKILIF
                     NFLSQFKASEILFLDLYDTRFEKQSLERLADFLNENLQIKILCLYNLDFIPNLEKIKI
                     PIILSTNIKDLNVNGFEELELDYFDFEEFISVSKKNLPINNLVGLFLQSGRSKFGEKN
                     ILLRQSFTLLELEILKYLALNLGQQISISKIFIELKKRLKTSKDSVYQAIKKLENTYV
                     IYTLKHDEKKLQKIYFKDFGLRNNLCISKDFSHLFENLVLSELFKFKEEFFYNKYFNF
                     YSQISKIAYISSPTLDIDLIKLRAKKILPKALELGIFHVIFITLSSEDSFFEQGVKFE
                     VISFDKFSLGF"
     gene            complement(1575..2306)
                     /locus_tag="RJ266_001471"
     CDS             complement(1575..2306)
                     /locus_tag="RJ266_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HDV7355198.1"
                     /translation="MKPIIIFFSLFLIPLFADDLKSGFGEEYYKLDIDQKRQIFFIKM
                     NEMFDQSFKKIEQERAFIEAFFKDAYKTGFRTSNQINLEKLITIKNKYRIENLYDFAE
                     YKKRIQKIPKSMGIAQALVESATGTSRFAREANNLFGEWTWGEKGLIPDLRHPDKKHK
                     IKIFDSLQDSVDSYVLNLNRHFAYEKFRDARAKFESEGKEITGLEAIKTLDSYSERKG
                     YYINLITKIIKRYNLEKYDTNSNNT"
     gene            complement(2281..3030)
                     /locus_tag="RJ266_001472"
     CDS             complement(2281..3030)
                     /locus_tag="RJ266_001472"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HDV7355199.1"
                     /translation="MKFYKYCASGNDFVITNADRKEDRSALAKELCNRYEGIGADGFI
                     VILPHEKYDFEWEFYNNDGSRAAMCGNGSRAAAHFAHHINKINPNMSFLTGAGIIKAK
                     VNQDKVEVSLGKIKSVQNTFEELGKTWQLCNTGVPHLVHFCQNLDEFDTMLCQKMRQK
                     YNANVNFVKILDENHLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNKVKITPK
                     SGEEVGFAYKNEELFFEGKVKYCFEANYNFF"
     gene            complement(3027..3632)
                     /locus_tag="RJ266_001473"
     CDS             complement(3027..3632)
                     /locus_tag="RJ266_001473"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HDV7355200.1"
                     /translation="MKNAFFVTASIACGKSTFIEIANSLGFKSISADKIAHKILDENA
                     LELEKIFSPFSLKNLLKKEKKIDRKILGEIVFNNKEAKKILENFTHPKIRAKILEQMQ
                     ILDKENKAFFVEIPLFFESGAYENLGKVIVIYTPKELSLKRIMQRDKLSLEAAKARLD
                     SQIDIEEKLKKADFIIKNTNSYADFRQECVKVIQEISKGNM"
     gene            3693..4682
                     /locus_tag="RJ266_001474"
     CDS             3693..4682
                     /locus_tag="RJ266_001474"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HDV7355201.1"
                     /translation="MKISYEDAGVSIDNGNTFVEAIKPLVKETFNDNVVGGIGSFAGA
                     FRMPSGFKKPVILGATDGVGTKLRLAIDAKKYDTIGQDLVAMCVNDLICNFATPLFFL
                     DYYATAKLEVEVAKAVVSGITKGCKMANCALIGGETAEMPGMYAKDDFDLAGFAVGMA
                     EEDEIDRSKFVKNGDILLALPSSGLHSNGYSLARKVLFESLKLKFDDKIEGKNLIDIL
                     LEPTRIYVRDFLTLKPYISALAHITGGGLVENLPRVLPRGMGATIRKHHLKTPEIFYT
                     IGQAVEESEMYRSFNMGVGLVMVVDPSNVSKVLENSDAFIIGEICINEGIVLE"
     gene            complement(4703..5947)
                     /gene="dcuC"
                     /locus_tag="RJ266_001475"
     CDS             complement(4703..5947)
                     /gene="dcuC"
                     /locus_tag="RJ266_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DcuC"
                     /protein_id="HDV7355202.1"
                     /translation="MTATFKSQLSGVGLIIMSVAGFAAYMKHINASAKLAFLANKPLG
                     KIKNKYLILSGTFVVGMALKIVISSYAGLLLLLLACIYPVLISLKIRPITAVCVLSLI
                     ALDYGPKDGNSINMADMVGQSDNVVGLFLNYQIYSVIAYVVVIAILIPFYFAWIDKRD
                     KEKGVLNDEVEIPQIIDPKCPTFYILFPWLPVVFLFIAYFFTIKLDVVTANFVSISLV
                     FLVEFARHRNARKLGEDMMVILKAMAEIFISVVSIIIAAGVFAEGIKALGGVNILANA
                     VSSLGTGNFAWFGILLSIAILSFLVYFATVIMGSGIAAFNAFGKLAPDIATKLGVAPI
                     TLVLPIEIASCLGRAASPIAGGIIALAGFAKVAPMDIIKRTTPLLLIAMLVNVLVAFY
                     LAQTNPLPKEQNTTKIELKIQK"
BASE COUNT         2119 a          902 c          956 g         2173 t
ORIGIN      
        1 ttaaaaatta aaaaaaggag tcaatcatgt cagttacaaa acaattatta caaatgcaag
       61 cagatgctca tcatctatgg gttaaatttc ataattatca ctggaatgta aaaggtttgc
      121 aatttttttc tatacacgag tacacagaaa aagcttatga agaaatggca gaactttttg
      181 atagttgtgc tgaaagagtt ttacagcttg gcgaaaaagc tatcacttgc caaaaagttt
      241 taatggaaaa tgcaaaaagt ccaaaagttg caaaagattg ctttactccg cttgaagtca
      301 tagaactgat caaacaagat tatgaatatc ttttagcaga atttaaaaaa ctcaatgaag
      361 cagcagaaaa agaaagtgat accacaacag ctgcttttgc gcaagaaaat atcgcaaaat
      421 atgaaaaaag tctttggatg ataggtgcta ctttacaggg tgcttgcaaa atgtaattta
      481 aggggcttta tgccccaatt atacaaacta ggttataata tcctttttta aaggataaaa
      541 ttgaaagtac ttaatttttt ttatgaaaat caccctaaat ttgaagtaag ttatgaaaga
      601 aaaaatcaaa tttcaaaacc aaatattatc ataaaaggcc cacgattttg tggtaaaaaa
      661 atacttattt ttaatttttt atctcaattt aaagcaagtg aaattttgtt tttagattta
      721 tatgatacac gctttgaaaa acaaagttta gaaagacttg ctgattttct gaatgaaaat
      781 ttacaaatta aaattctttg cctttataat ttggatttta tccctaattt agaaaaaatt
      841 aaaattccca tcatcttaag tacaaatata aaagatttaa atgtaaatgg gtttgaggag
      901 cttgaacttg attattttga ttttgaagaa tttattagtg taagtaagaa aaatttacct
      961 ataaataatt tagtaggtct ttttttacaa agtggacgca gtaaatttgg agaaaaaaac
     1021 atacttctaa gacaaagctt tactctttta gaattagaaa ttttaaagta tttagcttta
     1081 aatttgggtc agcaaatcag tatttctaag atatttatag aactcaaaaa aagattaaaa
     1141 acttcaaaag atagtgttta tcaggctata aaaaaattag aaaatactta tgtgatctat
     1201 actttaaaac atgatgaaaa aaaacttcaa aagatttatt ttaaagattt tggcctaaga
     1261 aataatcttt gtatttcaaa ggatttttca catttatttg aaaatttagt tttaagcgag
     1321 ttatttaaat ttaaagaaga atttttttat aacaaatact ttaactttta tagccaaata
     1381 tctaaaattg cttatatttc aagtccaact ttagatattg atttgattaa attacgtgct
     1441 aagaaaattt taccaaaggc tttagaactt ggaatttttc atgtgatttt tatcactctt
     1501 tcaagtgagg atagtttttt tgaacaaggg gttaaatttg aagtcatatc ttttgataaa
     1561 ttttcacttg gattttaggt gttgtttgag tttgtatcgt atttttcaag gttgtatcgt
     1621 ttgatgattt ttgtaataag attgatataa tatcccttgc gttcagaata agaatctaaa
     1681 gttttaatag cctctagccc tgttatctct ttgccttcgc tttcaaattt agctcttgca
     1741 tcgcgaaact tttcataagc aaaatgacga tttaaattta aaacataaga gtcaacacta
     1801 tcttgcagac tatcaaaaat tttaattttg tgttttttat ctggatgtct taaatcagga
     1861 attaaacctt tctcacccca agtccattct ccaaaaagat tgtttgcttc tcttgcgaag
     1921 cgactggtac ctgtagcact ttcaactaaa gcttgggcta tacccatgga ttttggaatt
     1981 ttttgaatac gttttttata ttctgcaaaa tcataaagat tttcaatgcg atatttgttt
     2041 tttatcgtga taagtttttc aagatttatt tggtttgaag tcctaaagcc tgttttgtaa
     2101 gcatctttaa aaaaggcttc gataaaagct ctttcttgtt caattttttt aaagctttga
     2161 tcaaacattt cattcatttt tataaaaaaa atttgtcttt tttgatctat atcaagtttg
     2221 taatattctt ctccaaatcc actctttaga tcatcagcaa aaagtgggat tagaaaaaga
     2281 ctaaaaaaaa ttataattgg cttcaaaaca atactttacc tttccttcaa aaaacaattc
     2341 ttcattttta tatgcaaacc ctacctcttc accactttta ggagttattt taactttatt
     2401 ttgtactttt ttatttaaaa atgccagata aaaacaagcc cccattcctg tgccacaagc
     2461 taaggtttca tcttcaactc cgcgttcata ggtgcgaact tttaaatgat tttcatctaa
     2521 aatttttaca aaattaacat tggcattata tttttgtctc attttttgac aaagcattgt
     2581 atcaaattca tctaaatttt gacaaaaatg tactagatgt ggaactccag tgttgcaaag
     2641 ttgccaagtt tttcctaatt cttcaaaagt attttgcacg ctttttattt tgcctaaaga
     2701 tacttcaact ttatcttgat ttacctttgc ttttattatt cctgcaccgg ttaaaaaact
     2761 catgttagga tttattttgt taatatgatg tgcaaaatgt gccgcagccc ttgagccatt
     2821 gccacacata gcagcccttg agccatcgtt attataaaat tcccattcaa agtcgtattt
     2881 ttcatgaggc aatattacga taaagccatc cgcacctata ccctcataac gattacaaag
     2941 ttctttagct aaagcacttc tatcttcttt tctatcagca tttgttatga caaaatcatt
     3001 cccacttgca caatatttat aaaatttcac atgtttcctt tagaaatttc ttgtattact
     3061 ttaacacatt cttgcctaaa atcggcataa gaattagtat ttttaatgat aaaatctgct
     3121 tttttaagtt tttcttcaat atctatttga gaatcaagtc ttgcttttgc agcttctaag
     3181 ctaagcttat ctctttgcat gattctttta aggcttaatt ctttaggtgt gtaaattaca
     3241 atgactttgc ctaaattttc ataagcaccg ctttcaaaaa aaagaggaat ttctacaaaa
     3301 aaagctttat tttctttatc tagaatttgc atttgttcta aaattttagc tcgaatttta
     3361 ggatgagtga aattttctaa gattttttta gcttctttat tgttaaaaac aatttctcca
     3421 aggatttttc tatcgatttt cttttctttt ttgagtaaat tttttaaact aaagggagaa
     3481 aaaatctttt caagttctaa agcattttca tctaaaattt tatgagcgat tttgtctgcg
     3541 ctaatgcttt taaagcctaa agaattcgct atttctataa aagtgctttt accacaagca
     3601 attgaagcgg ttacaaaaaa agcatttttc atcttatgcc ttattaaaac ttttttcgtt
     3661 aaaatacctt tttagttctt aaaggaaaat aaatgaaaat ttcatatgaa gatgcaggcg
     3721 taagtataga taatggaaat acctttgtag aggctataaa acctttggtt aaagaaactt
     3781 ttaatgataa tgttgtaggt ggaattggtt cttttgctgg tgcttttaga atgccaagtg
     3841 gttttaaaaa gcctgtgatt ttaggtgcaa cagatggggt tggtaccaag cttcgcttgg
     3901 caattgatgc taaaaaatat gatactatag ggcaagattt agtagcaatg tgtgtgaatg
     3961 atttgatttg taattttgct acgcctttgt ttttcttaga ttattatgct acagctaagc
     4021 ttgaagtaga agtagcaaag gctgttgtat caggcattac caagggatgt aagatggcaa
     4081 attgtgcatt aattggcgga gaaactgctg aaatgcctgg aatgtatgca aaagatgatt
     4141 ttgatcttgc gggttttgct gtgggtatgg ctgaagaaga tgagattgat agaagtaaat
     4201 ttgttaaaaa tggtgatatt ttattggcac ttcctagttc aggacttcat tcaaacggtt
     4261 attctttagc tagaaaagta ctttttgaaa gtttaaaatt aaaatttgat gacaagatag
     4321 agggtaaaaa tttaattgat attttgttag aacctacaag gatttatgtg cgtgattttc
     4381 ttacactaaa gccttatatc agtgctctag cacatattac agggggtggt ttagtagaaa
     4441 atttaccacg cgttttacct cgtggtatgg gtgcaactat acgcaaacat catcttaaaa
     4501 ctcctgaaat tttttatact ataggacagg ctgtagaaga aagcgaaatg tatagaagct
     4561 ttaacatggg agtgggttta gtaatggttg tagatccttc taatgtaagt aaggttttag
     4621 aaaattcaga tgcctttatt atcggcgaaa tttgcattaa tgaaggtatt gttttagaat
     4681 gaaaataaag cgttaatacg ctttattttt gtattttaag ttctattttt gtagtgtttt
     4741 gttcttttgg caaaggattg gtttgtgcta gataaaaggc tacaagtaca tttacaagca
     4801 tagcgataag taaaagagga gtggttcgtt ttataatatc cattggagct acttttgcaa
     4861 atccagctaa agctatgatt ccgcctgcta ttggtgaagc tgcacgacct aaacaagatg
     4921 caatttctat aggtaaaact agagtaatag gtgcaacgcc taattttgta gctatatcag
     4981 gagctagttt tccaaaagca ttaaaagcgg caattccact tcccataatc actgtggcaa
     5041 aataaactaa aaagcttaaa atagctatac tcaaaagaat tccaaaccat gcaaaatttc
     5101 ctgttccaag acttgaaacc gcgttggcaa ggatattaac tccaccaagt gctttaatgc
     5161 cttcagcaaa tactccagcg gcgatgatta tgcttacgac tgagataaaa atttcagcca
     5221 tagcttttaa aatcaccatc atgtcttcgc ctaattttct agcatttctg tgtcttgcaa
     5281 attcaacaag aaaaactaaa gaaatgctta caaaatttgc tgttacaaca tcgagcttga
     5341 tagtaaaaaa atacgctata aataaaaata caacaggtaa ccaaggaaag agtatgtaaa
     5401 aagtagggca tttaggatca atgatttgcg gaatttcaac ttcatcattt aaaacacctt
     5461 tttctttatc tcttttatca atccaagcaa aataaaaagg aatcaagatg gcaataacta
     5521 caacataggc aatcacacta taaatttggt aatttaaaaa aagccctacg acattatcac
     5581 tttgtcctac catatctgcc atattgattg aatttccatc ttttggacca taatcaagcg
     5641 caattaaaga aagcacacat acggctgtaa taggacggat tttaagtgag attaaaacag
     5701 gataaataca tgctaacaaa agcaaaagca atccagcata gctagaaatg acgattttta
     5761 aagccattcc aacaacaaaa gttccactta aaatcaagta tttatttttg atttttccta
     5821 agggtttatt tgctaaaaaa gcaagttttg ccgaagcatt gatatgtttc atataagcag
     5881 caaaacctgc cacactcatg ataataagtc ctactccaga aagctgactt ttaaaagttg
     5941 ctgtgataaa agataactat caagtaaaac atttaaaagc ttgtatactc tctacttgga
     6001 gcttttggta taggtgttcc tgtgatataa aaagcaaaaa taagcaagat aatatttgaa
     6061 agaaaaatac aaaaatggga tcgtattttt ttgagtatat cataaaaatt agcatagggt
     6121 ctattgaatt tacaataaat tggattttat
//
LOCUS       DAPIWB010000076         5952 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.077, whole genome shotgun sequence.
ACCESSION   DAPIWB010000076 DAPIWB010000000
VERSION     DAPIWB010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5952)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5952)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5952
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.077"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            47..766
                     /locus_tag="RJ266_001476"
     CDS             47..766
                     /locus_tag="RJ266_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HDV7355203.1"
                     /translation="MKVKWSRDFSIKNMQLDKQHELIFEITNLANDLALKIQENNTQY
                     KDDLKQILAKLFQYIKIHFKDEEKFMKSIDFPLIEEHKKSHQILVEKTKELLEHSDNI
                     VKMSQELSILTKDWILDHFANEDLWIANFTKKTLHLQEIHYTLEQYIKLKSIKQDLRA
                     EKTHDYICNCSLRIHAVPQTIHQELVSKENTLKCEKCGQILVHLDYFDLNQNFEKFNA
                     IFEDALQNHHFTTQKNDMGGG"
     gene            767..2638
                     /locus_tag="RJ266_001477"
     CDS             767..2638
                     /locus_tag="RJ266_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF342 domain-containing protein"
                     /protein_id="HDV7355204.1"
                     /translation="MNFQVKTLETFNPFESLNHEQANTEQILDFRVIDFKLLCSSVKP
                     AKTKTYERKDFDLFYADDFFVKNYNTIVQKFLIEIYPKTQSFPFTVKLRSNSNLTHLK
                     ASINLTENFKYYPNLKFDILQNIYKIMIKQKFLILRLDKNLFDKIDDFILSIQKSPSI
                     KEIELEIAKGVDKIEHKSDEIIYHRDVNEECFDENINYDEGNYCKPIEKNELLFEYIY
                     RILGKEGRNLRGEILHLNPIAFLDNPFIIKDESIYTEELEDRIKYFSANYGFLNKDHT
                     GYCIANNLKLSQIGLKTTGSIKTNIDENINLEITNFDISDDAIKSGIVNVQASNIKVN
                     GNVGATKLYGKNISIKGLTHAKSEIFAQDIFITTHKGTLQADTVYIKNLENGTIIAKN
                     VFVENCMGGKIEAENIYICNLLTDNTLYPRKNLIITNNIKFKNNIVVSPLVSIENNSD
                     TECENLKNLSLKIKSKLDDTISKMQNYYDYLIKNQIKIIKLQKTKNPNAIEMKFSNLY
                     HDIIKKYNHLSISYKKFIKLKYQIDAKLNFLNEMVYNVKIYIKAENIGEDNFLKFYPN
                     TNTNLELKHHINLKDYEKVLYLEKGQQVSYIKSSHNYSESDIEEIKIIFEKLEKDNS"
     gene            complement(2642..4279)
                     /locus_tag="RJ266_001478"
     CDS             complement(2642..4279)
                     /locus_tag="RJ266_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HDV7355205.1"
                     /translation="MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDI
                     FYTTITTQSTNPAQGGYGSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGN
                     AYYTRNGSFRRDANGYLVDSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNN
                     GFTVNSNNSFSIGTTASQGAIKVPVNMYLPPQVTQNVKWSGSLNTNTTTEVVKVDLDP
                     SKFNITKTEDGKYVVSGSVSKEDVFSAKAGDRIILNFTDDNGVKTSFEATLDENLNFK
                     SNELDLKGLDENSIKLDTAQISTEQQKANKDILESPIYNADGSKSTLRVTLERVLPQE
                     GDNIQYKAIAQIYDSNGNAVGNPTEGNMVFDKNGALLQNNITSIANPNGGTINIDLGS
                     PYDANKPGSGYSGIYIKEGVEKNVVTQQDGVAEGFFEQYNISDDGSIVAQFSNGKNAI
                     VGKLALYNFINEQGLVAMGDNIFAATANSGDASFIMKDGQVVNTAKFKGGFLEQSNVD
                     LSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR"
     gene            complement(4283..5167)
                     /locus_tag="RJ266_001479"
     CDS             complement(4283..5167)
                     /locus_tag="RJ266_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod modification protein"
                     /protein_id="HDV7355206.1"
                     /translation="MISSSDWNLNTTATTSGTTSSGSTSGTTRTDSSSSSGIVSNPNA
                     TLDKDAFLKLLLIELQHQDPTDPMDSDKMLTQTSQLSALEMQQNTNTTMQKMVETMQK
                     LSDSFSTSMSTSALGAIGKMATVSDNKIKLTGADELIALKMYLPEDSDENGVTLEIYD
                     SNNKLVFSEKSDAKSISQGLFTMEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKITANY
                     GTYPIEGVVFKDGVAYAKMAGQEVPFDAIQEITDYKLGSSSSTGGSGSSGDSSGGSSD
                     GDSSGSGSTEDGDKEEKA"
     gene            complement(5221..>5952)
                     /locus_tag="RJ266_001480"
     CDS             complement(5221..>5952)
                     /locus_tag="RJ266_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HDV7355207.1"
                     /translation="KEIVKDTQKLVSNLTQKDFNLNKEPKNNNKENKDIKQNFFDQKL
                     NFENLNKTQVAQNKENNANFNNNTTNKETFTQEQTKTHSENVDKNSLDELNSLVKDLN
                     KVTQNNARNITPKETLQYFSQDLKEAVDQYKAPITKLSITLNPNNLGEVEVTLIQRGN
                     NLHINFNSNANAMNLFIQNQAEFKNSLVNMGFTGLEMNFSDQGKREQNQNQGKNRSGY
                     GFKDALDGKNESEKVNLELVLAKYF"
BASE COUNT         2142 a          984 c          794 g         2032 t
ORIGIN      
        1 ctctaaaaat acgatataaa aataatttat atcgcaagga aaaaatatga aagttaaatg
       61 gagtagagat tttagcatta aaaatatgca attggacaaa caacatgaac taatttttga
      121 aattaccaat cttgcaaatg atttagctct caaaattcaa gaaaacaata cacagtataa
      181 agatgatcta aaacaaattc ttgcaaaact atttcaatac atcaaaattc attttaaaga
      241 tgaagaaaaa tttatgaaaa gcattgattt tcctttgatt gaagaacata aaaaatctca
      301 tcaaatatta gtagaaaaaa ctaaagagct tttagagcat tcagataata ttgtaaaaat
      361 gtctcaagaa ctttccatat taaccaaaga ttggatttta gatcattttg ctaatgaaga
      421 tttatggata gctaatttta caaaaaaaac cctacacctt caagaaatcc attatacctt
      481 ggaacaatac ataaaactaa aatcaatcaa acaagaccta agagctgaaa aaactcatga
      541 ttatatttgc aattgttctt tgcgtatcca tgcagttcca cagactatac atcaagagct
      601 tgttagcaaa gaaaatacct taaagtgcga aaaatgtggg caaattttag ttcatttgga
      661 ttattttgat ttgaatcaaa atttcgaaaa attcaatgct atttttgaag atgcactaca
      721 aaatcaccat ttcacgactc aaaaaaatga tatggggggg ggatagatga attttcaagt
      781 aaaaacctta gaaactttca atccttttga aagtttaaat catgaacaag caaacacaga
      841 acaaattctt gattttagag ttatagattt taaacttctg tgttctagtg taaaaccagc
      901 aaaaacaaaa acttatgaaa gaaaggattt tgacttattt tatgcagatg atttttttgt
      961 aaaaaactac aataccatag tgcaaaaatt tcttatagaa atttacccaa aaacccaaag
     1021 ttttcctttt acagtcaaac ttagatccaa ctccaaccta acccatctaa aagccagtat
     1081 caaccttaca gaaaatttta aatattatcc taatttaaaa tttgatattt tacaaaatat
     1141 ctacaaaata atgatcaaac aaaaattttt aatcttaaga cttgataaaa atttatttga
     1201 caagattgat gattttatct tatcaataca aaaaagtcca tctattaaag aaatagagct
     1261 tgaaattgcc aaaggtgtag ataagattga acataaaagt gatgaaatta tttatcatag
     1321 agatgttaac gaagaatgtt ttgacgaaaa tattaactat gatgaaggaa actactgtaa
     1381 acctattgaa aaaaatgagc tactttttga atacatttat agaattcttg gaaaagaagg
     1441 acgaaattta agaggagaga tacttcattt aaatccaata gcctttcttg ataatccttt
     1501 tatcataaaa gatgaaagca tttacacaga agaattagaa gatagaatta aatattttag
     1561 cgccaattat ggatttttaa acaaagatca tacaggatat tgtatcgcaa ataatttaaa
     1621 attatcacaa atagggctta aaacaaccgg ttcaatcaaa acaaatatcg atgaaaatat
     1681 aaacttagaa atcactaatt ttgatataag tgatgatgct attaaatcag gtattgtaaa
     1741 tgttcaagct tcaaatataa aagtaaatgg gaatgttgga gcaacaaaac tttatggaaa
     1801 aaatatcagt atcaaaggct taactcatgc aaaaagcgaa atttttgcac aagatatttt
     1861 tattacaaca cacaaaggaa ctttgcaagc tgacactgta tatataaaaa atttagaaaa
     1921 tgggacaatt atagctaaaa atgtatttgt tgaaaactgc atgggtggaa aaatagaagc
     1981 agaaaatatt tatatttgca atttactaac ggataatact ttatatccaa gaaaaaatct
     2041 aatcataaca aacaatataa aatttaaaaa caatatcgta gtttcaccac tagtttctat
     2101 tgaaaacaac tcagatacag aatgcgaaaa tcttaaaaat ctaagcctta aaataaaaag
     2161 taagcttgat gacaccataa gcaaaatgca aaattactat gattatctaa tcaaaaatca
     2221 aatcaaaatc atcaaacttc aaaagactaa aaatcctaac gccatagaaa tgaaattttc
     2281 aaatctttat cacgatatca taaaaaaata caatcatctt agcatttcgt ataaaaaatt
     2341 tataaaatta aaatatcaaa ttgatgcgaa attaaatttc ttaaatgaaa tggtttacaa
     2401 tgtaaaaata tacataaaag ccgaaaatat cggagaggat aattttttaa aattttatcc
     2461 taacacaaac accaaccttg aactaaaaca tcatataaat ttaaaagact atgaaaaggt
     2521 tttatatctt gaaaaaggac agcaagtaag ttatattaaa tcaagccata attatagcga
     2581 aagcgacata gaagaaatta aaattatttt tgaaaaatta gaaaaagata attcctaaga
     2641 attatctttt catattaatg gctttttgta tcatctgatc acttgtagtg atactttttg
     2701 agcttgcatc aaaggctttt tgagttacga taaggtttga aagctctgcg cttaaatcaa
     2761 catttgattg ttctaagaat ccgcctttaa atttagctgt attaacaact tgaccatctt
     2821 tcataataaa acttgcatca ccgctatttg ccgttgctgc aaaaatatta tctcccatag
     2881 caactaatcc ttgctcattg ataaaattat ataaagcaag ctttccaact atggcatttt
     2941 taccattgct aaattgcgca acaatacttc catcatcgga tatattatat tgttcaaaaa
     3001 acccttcagc tacaccatct tgttgtgtaa ctacattttt ttcgacgcct tctttaatat
     3061 aaatcccact ataacccgaa ccaggcttgt tagcatcata aggagaacct aaatcaatat
     3121 taattgttcc accatttgga tttgcaatgc ttgtaatatt gttttgaagc aaagcaccat
     3181 ttttatcaaa aaccatattt ccttcagtcg gattgcctac ggcattgcca ttagaatcat
     3241 aaatttgtgc aatagcttta tattgtatat tatcgccttc ttgcggtaaa actctttcaa
     3301 gtgtaaccct taaagtgctt ttacttccat ctgcattata aataggggat tctaaaatat
     3361 ctttattggc tttttgttgc tctgttgaaa tttgagctgt atcaagcttg atgctatttt
     3421 catccaatcc ttttaaatca agctcgttac ttttaaaatt tagattttca tctaaagtcg
     3481 cttcaaagct tgtttttacg ccattatcat cagtgaaatt taaaataatc ctatcacccg
     3541 ctttagcact aaacacatct tctttgctaa cactaccact aactacatat tttccatctt
     3601 cagtttttgt aatgttaaat ttactaggat caagatctac tttaactact tctgttgttg
     3661 tgttagtatt taaacttcca ctccatttta cattttgagt tacttgagga ggtaaataca
     3721 tattcacagg tactttaata gccccttgag aagcggttgt gcctatactg aaagaattat
     3781 ttgaatttac agtaaaacca ttatttaccg gagttcctgt gttaagataa tcccccataa
     3841 gcccagcaac tctatcgcta tagttaatac cagtaaaagc aggattcatt gttcctaaaa
     3901 caaaatttcc ataagaatct accaaatatc cattggcatc tcttctaaat gatccatttc
     3961 tagtatagta agcattgcca tcagccccta aaaccccaaa aaatcctttt ccttgcaaag
     4021 ccacatcaaa ttcgccatca cttgcaacag gagaaccctg ttcgaaaaca acttgagaag
     4081 atgctgcacc gctaccataa ccaccttgag cagggttggt tgattgggtt gttatggtag
     4141 tataaaaaat atctttaaat tgagcatcag agtatttaaa gcccgtggta ttgacatttg
     4201 ctatgttatt agcagtgata tcaataccaa agctattgct ttttactcca gaaatcccat
     4261 tataaaatga attcatcatg gcttatgcct tttcctcttt gtcgccatct tctgtagatc
     4321 cagacccaga agaatctcca tcgcttgaac caccacttga gtctccactt gaaccgcttc
     4381 ctccagtaga tgaagatgaa ccaagcttat aatctgttat ttcttgtatt gcatcaaaag
     4441 gaacttcttg tccagccatt tttgcatagg caacaccatc tttaaaaaca acaccttcga
     4501 taggataagt tccgtaattt gcagtgattt tttcaccatt tttattatta taaaccattt
     4561 taacagtgta ctcaccatca cctgcataaa ccccatcgtt atttcttcct ggccactcca
     4621 tagtaaataa accttgagaa atagatttag catcgctttt ttcactgaaa acaagtttat
     4681 tattgctatc ataaatttct agcgtaacac cgttttcatc agaatcttca ggcaaataca
     4741 ttttaagagc gataagctca tctgcacctg taagtttgat tttattatct gaaacagttg
     4801 ccattttacc aatagcccct aaagctgaag tactcatact tgtactaaaa gaatcagaaa
     4861 gcttttgcat agtttcaacc attttttgca tagttgtatt ggtattttgc tgcatttcaa
     4921 gtgcgctaag ctgcgaagtt tgagtaagca ttttatcgct atccatagga tctgttggat
     4981 cttgatgttg aagctctatc aaaagaagtt ttaaaaacgc atccttatct aaggtagcgt
     5041 ttggattgct cactattcct gagctactgc ttgaatctgt tctagttgtt ccactagtac
     5101 ttcctgaaga agtagtacct gaagttgtag cagtggtatt taaattccaa tccgatgatg
     5161 atatcattat aaactccttt ttatttagtt ttttattatt taagcaataa gtgttccaat
     5221 ttaaaaatac ttcgctaaaa caagctctag attgactttt tcactttcat tttttccatc
     5281 taaagcatct ttaaaaccat atccactacg attttttcct tgattttgat tttgctctct
     5341 tttaccttga tcactaaaat tcatttcaag tccagtaaat cccatattta caagagaatt
     5401 tttaaactcg gcttgatttt ggataaacaa attcattgca ttggcattgg agttgaaatt
     5461 gatatgaagg ttattacctc tttgtatcaa agttacctcc acttctccaa gattattagg
     5521 atttagagtg atactaagtt tagtaatagg cgctttgtat tgatccacag cctcttttaa
     5581 atcttgtgaa aaatactgca aagtttcttt aggagtgata ttgcgagcat tgttttgtgt
     5641 tactttattt aaatctttga ctaaagaatt taactcatct aagctatttt tatctacatt
     5701 ttcactgtgc gtttttgttt gctcttgagt aaaagtttct ttattagtag tattattatt
     5761 aaaatttgca ttattctctt tgttttgagc tacttgagtt ttatttaaat tttcaaaatt
     5821 taatttttga tcaaagaaat tttgttttat atctttattt tctttgttgt tgtttttagg
     5881 ctctttattt agattaaaat ctttttgtgt taaatttgaa actaatttct gagtatcttt
     5941 aacaatttct tt
//
LOCUS       DAPIWB010000077         5922 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.078, whole genome shotgun sequence.
ACCESSION   DAPIWB010000077 DAPIWB010000000
VERSION     DAPIWB010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5922)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5922)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5922
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.078"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            74..769
                     /locus_tag="RJ266_001481"
     CDS             74..769
                     /locus_tag="RJ266_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HDV7355208.1"
                     /translation="MTQEELDALMNGDVDLDSETEAEVKTEESNTEEDALMLQDVKIA
                     DYKPNPSVVWPPPPPNQEHKVVHQLDDVTKDSELKATEMMDKLESINNFFADSESLLK
                     EINKAIEKNIDIFSKLNEKFPNVESFSEALELNNQAKKSSKEIVGNLQSGQDEVMMAM
                     DAMQYQDIHRQKIERVINVMRALSRYMSSLFEGKIDDKKRVSSAVHIEGDSTADVVSN
                     DDIEALIASLGQK"
     gene            766..2019
                     /locus_tag="RJ266_001482"
     CDS             766..2019
                     /locus_tag="RJ266_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HDV7355209.1"
                     /translation="MIIPEIVAPAGNFTKLKIALAYGADAVYAGVNNFSLRSRTAREF
                     NYESFEEAIKYTHERGKKIYVTLNGFHLSSQIEGLKRHILKLREMKPDAFIVASVGAM
                     RLVKELAPEISLHVSTQANILNYLDAQVYKDMGAKRVVIARELGLKDAKALKENCDIE
                     LEAFVHGSMCFAYSGRCLISSVQSGRMSNRGSCANDCRFNYELYAKNPENGTLFRLEE
                     DENGTHIFNSKDLNLCSYIEKIMQENCISAFKIEGRTKSEYYVALTTRTYKMAIQDAL
                     EGKFESSKYEKEIATLKNRGFTDGYLVSRPLEKTDTQNHNTSIEEGSHQVHAISEDGR
                     FFKCKGKIVLNTPYEILTPLGDVIQTCDNELGKIYQKEGKYFIEFKKLIAKNNKEFSE
                     IHSGNEHEIQLPNKISALSFLRKEI"
     gene            2020..2514
                     /gene="purE"
                     /locus_tag="RJ266_001483"
     CDS             2020..2514
                     /gene="purE"
                     /locus_tag="RJ266_001483"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HDV7355210.1"
                     /translation="MNFVSILMGSKSDYETMKEAAKTLESFGVKYELIISSAHRSPKR
                     TKEYIANAEEKGVKVFIAAAGMAAHLAGAVAAYTTKPVLGVPMPGSNLASMDSLFSTV
                     QMPSGIPVGTLAIGKAGAINAAYLAMQILAIYDVDLAQKLKEDRLEKEKKLVSDSKEV
                     EVLL"
     gene            2524..3060
                     /locus_tag="RJ266_001484"
     CDS             2524..3060
                     /locus_tag="RJ266_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3972 domain-containing protein"
                     /protein_id="HDV7355211.1"
                     /translation="MQTYLELEEFCKLVHLNEDVVKGMMANGALNFKEEEGKIYIEAH
                     QGTFSVVPSSAKSQTAMVNSMTLAGESFVEKTIGTILNLHEKVLDAKDETLEALKNEN
                     KFLKDALYSMQELYDEDRKTIETLNNELKHAREEIEFLKRKYKLMWSKTAEIFGAKTE
                     PDLEMNKNLEKPIENMEQ"
     gene            3072..3935
                     /gene="glyQ"
                     /locus_tag="RJ266_001485"
     CDS             3072..3935
                     /gene="glyQ"
                     /locus_tag="RJ266_001485"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HDV7355212.1"
                     /translation="MTFSQMILNLQNYWQEQGCAIMQPYDMPAGAGTFHPATFLRSLG
                     KKPWAAAYVAPSRRPTDGRYGENPNRLGAYYQFQVLIKPSPDNIQELYLKSLENLGFD
                     LKSHDIRFVEDNWESPSLGAWGLGWEVWLDGMEVTQFTYFQQVGGIAVDLVSAEITYG
                     LERIAMYLQNVDNVYDIVWSEFNGEKIKYADVHKQSEYEFSKYNFEVSDVKILNEQFE
                     NSYKECKNILEQGLALPAYDYCMLAAHTFNLLDARGAISVAQRQDYMLKIRELSKNCA
                     EIYKKNLNEAE"
     gene            3922..4647
                     /locus_tag="RJ266_001486"
     CDS             3922..4647
                     /locus_tag="RJ266_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HDV7355213.1"
                     /translation="MKLSEIYNFLDQLSPFNIQESWDNSGILLGDRDSEISTVYLSLD
                     IDENIIKEASENSLIITHHPLIFKGLKDLYDKTYPRAFIKEMIYKNISLISMHTNYDL
                     SHLNTYFTEEILGFKISFKDEFLIYVENSMSFEALCDWVKKKLNLQILRVSDCGKKDI
                     KRIAICTGSGGDLISKVDADCFLSGDFKYHQALEALSNQISLIDLGHFESERYFSQCL
                     AKDLKNLPLQVIITVSKNPFQYF"
     gene            4657..5373
                     /locus_tag="RJ266_001487"
     CDS             4657..5373
                     /locus_tag="RJ266_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HDV7355214.1"
                     /translation="MNKYLEQLVLLSKIDQEIDSYEPKIDSINKTLKDAELKIEKINA
                     DLEKIDEEIKDIENQKIQNNAHISEFSAKIKDLSKKSGVVKTEKEANALKIEEDIAKE
                     QLDAANDEIVRLDKILENKETYKKELEEEKIKQEQNINEIRVSIKSEMEVLEKDRMSV
                     YDKKTKLVSEMNQKVLSFYEKIRKWAKNTAVVPVKKQACYGCFMKIYDKTYLSVVKGE
                     EIVTCPHCGRILYKEQEEQN"
     gene            5370..>5922
                     /locus_tag="RJ266_001488"
     CDS             5370..>5922
                     /locus_tag="RJ266_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HDV7355215.1"
                     /translation="MIFFYYFLTWTAFLFCAVFILLLSFLKSKYKISLKSRFFLYKNL
                     HQEKADVHFHACSYGEVRSIKALVLKFDSRITTITQTGFECAKEFCKKVNYLAFENFL
                     PFWLKPCKVLVIFEAEYWLMLVFMARIYKAKIILLNARISDKSYHSYQRFSFFYKKIF
                     SYIDEVFAQSDLDKARLESLGAKN"
BASE COUNT         2196 a          676 c         1120 g         1930 t
ORIGIN      
        1 atttttgttt tagataaaat tgattataat tttgagcaat tattgaaaat ctagatttaa
       61 aaaagggaaa aaaatgactc aagaagagct tgatgctttg atgaatggtg atgttgatct
      121 tgattcagag acagaagcag aggtaaaaac cgaagaatcg aataccgaag aagatgcttt
      181 gatgttacaa gatgtcaaaa tagctgatta caaacctaat cctagtgtag tatggccacc
      241 acccccacca aatcaggagc ataaagttgt acatcagtta gatgatgtta caaaagatag
      301 cgagcttaaa gcaacggaaa tgatggataa gcttgaaagt attaataatt tttttgcgga
      361 ttctgaaagt ttactcaaag aaataaataa agcaatagaa aaaaatattg atattttttc
      421 taaacttaat gaaaaatttc ctaatgtgga aagtttcagt gaagctttag aattaaacaa
      481 tcaagctaaa aaaagttcta aggagattgt cggaaatctt caaagcggac aagatgaagt
      541 gatgatggca atggatgcaa tgcagtatca agatatacat cgtcaaaaaa tcgaacgtgt
      601 tattaatgta atgcgtgctt taagccgtta tatgagttcc ttatttgaag gtaaaattga
      661 tgataaaaaa cgtgtaagtt ctgcagtgca tattgaaggt gatagtactg ctgatgttgt
      721 aagtaatgat gatatagaag ctttaattgc aagtttaggg caaaaatgat cattcctgaa
      781 atagtagctc ctgcaggaaa tttcacaaaa ttaaaaattg ctttagctta tggcgcagat
      841 gcggtttatg cgggtgtgaa taatttttct ttaagatcac gcactgcaag agaatttaat
      901 tatgaaagtt ttgaagaagc tatcaaatat actcatgagc gtggtaagaa aatttatgtt
      961 actttaaatg gttttcattt gagttctcaa attgaaggtt taaaaagaca tattttaaaa
     1021 ttgcgtgaga tgaaacctga tgcttttatt gtagcttctg ttggagctat gcgtcttgtt
     1081 aaagaacttg cacctgaaat ttctttacat gtttctactc aggcaaatat tttaaattat
     1141 ttagatgctc aagtttataa ggatatgggt gctaaaaggg ttgtaattgc cagagaatta
     1201 gggcttaaag acgctaaagc tttaaaggaa aattgcgata ttgaacttga agcttttgtg
     1261 catggttcta tgtgttttgc ttattcaggg cgttgtttaa taagctctgt gcaaagtgga
     1321 agaatgagca atcgtggatc ttgtgcaaat gattgtagat ttaattatga gctttatgct
     1381 aaaaatccag aaaatggcac tttatttcgt ttagaagaag atgaaaatgg tactcatatt
     1441 tttaattcta aagatttaaa tctttgttct tatatagaaa aaatcatgca agaaaattgt
     1501 atcagtgctt ttaaaataga agggcgtact aaaagcgaat attatgttgc gcttacaaca
     1561 aggacttata aaatggccat acaagatgct ttagagggta aatttgagtc aagtaagtat
     1621 gaaaaagaga ttgctacact taaaaatcgt ggttttacag atggctatct tgtttcgcgt
     1681 cctttagaaa aaaccgacac acaaaatcat aatacaagca tagaagaagg ttctcatcaa
     1741 gtgcatgcta taagcgaaga tggaagattt tttaaatgta aagggaaaat cgttttaaac
     1801 acgccttatg aaattttaac ccctttaggc gatgtgattc aaacttgcga taatgaacta
     1861 ggtaaaattt atcaaaaaga gggtaaatat tttatagagt ttaaaaaact tattgctaaa
     1921 aacaataaag aatttagcga aattcatagc ggtaatgaac atgaaatcca attaccaaat
     1981 aaaatcagtg cattaagttt tttaagaaag gaaatataga tgaattttgt ttctatttta
     2041 atgggaagca agagtgatta tgagactatg aaagaggctg ctaaaacttt agaaagtttt
     2101 ggtgtaaagt atgaacttat catctcatca gctcatcgta gtccaaaaag aacaaaagag
     2161 tatattgcaa atgctgaaga aaaaggtgtg aaggttttta tagcagcagc tggaatggca
     2221 gcgcatttag ctggagctgt tgcagcttat acaacaaaac ctgttttagg agtgcctatg
     2281 ccaggaagta atcttgcaag tatggattct ttgttttcta cggtgcaaat gcctagtgga
     2341 attcctgtag gaactttagc tattggtaag gctggagcaa tcaatgctgc ttatttggct
     2401 atgcaaattt tagctattta tgatgttgat ttagcacaaa agcttaaaga agatcgtctt
     2461 gaaaaagaaa aaaaacttgt atctgattca aaagaagtag aagttttatt ataagggata
     2521 aaaatgcaaa cctatcttga acttgaagaa ttttgtaaac ttgtgcattt aaatgaagat
     2581 gtggttaagg gtatgatggc caatggggct ttaaatttta aagaagaaga gggtaaaatt
     2641 tacatcgaag cccatcaagg tacttttagt gtagtgccta gttctgcaaa atctcaaact
     2701 gcaatggtaa attcaatgac tttagcagga gaaagttttg ttgaaaaaac aataggaact
     2761 attttaaatt tacatgaaaa agttttagat gctaaagatg aaacacttga agcattaaaa
     2821 aatgaaaata aatttttaaa agatgccctt tattctatgc aagagcttta tgatgaagat
     2881 agaaaaacta tagaaacctt aaacaatgag ttaaaacatg cgcgtgaaga gatagaattt
     2941 ctcaagcgta aatataaatt aatgtggagt aaaactgcag aaatttttgg agctaagaca
     3001 gagcctgatt tggaaatgaa taaaaattta gaaaaaccta ttgaaaatat ggaacaataa
     3061 agagagatac aatgactttt tcacaaatga tacttaattt acaaaattat tggcaagagc
     3121 aaggttgtgc gattatgcaa ccttatgata tgccagcagg tgcaggaacc tttcatccag
     3181 caactttttt aagaagttta ggaaaaaaac cttgggcagc tgcttatgtg gctccaagta
     3241 gaaggcctac tgatggacgt tatggtgaaa atcctaatcg cttaggtgct tattatcaat
     3301 ttcaagtttt aattaaacct agtcctgata atatccaaga attatatctt aaaagtcttg
     3361 aaaatttggg ttttgattta aaaagtcatg atattcgttt tgttgaagat aattgggaga
     3421 gtccaagttt gggtgcttgg ggtttaggct gggaagtatg gcttgatggt atggaagtta
     3481 ctcaatttac ttattttcag caagttggcg gtatagcagt agatttagta agtgctgaaa
     3541 ttacctatgg tcttgaaaga atagccatgt atcttcaaaa tgttgataat gtttatgata
     3601 tagtttggag tgaatttaat ggagaaaaaa ttaaatacgc agatgtgcat aagcaaagtg
     3661 aatatgaatt tagtaaatac aattttgaag taagtgatgt taaaatctta aatgagcagt
     3721 ttgaaaattc ttacaaagaa tgtaaaaata ttttagaaca aggactagct ttacctgctt
     3781 atgattattg tatgcttgct gcacatactt ttaatctttt agatgcaaga ggagcaattt
     3841 ctgtagcaca aagacaagat tatatgttaa aaattcgtga actttcaaaa aattgtgctg
     3901 aaatttataa gaaaaattta aatgaagctg agtgaaattt ataatttttt agatcaatta
     3961 agtcccttta atatccaaga atcatgggat aatagtggaa ttttgcttgg agatagggat
     4021 agtgaaattt caactgttta tttaagctta gatattgatg aaaatatcat taaagaagcg
     4081 agtgaaaatt ctttaattat cacacaccat cctttgatat ttaaaggttt aaaagattta
     4141 tatgacaaga cttatcctag ggcttttatc aaagaaatga tttataaaaa tatttcttta
     4201 atcagtatgc atacaaatta cgatttaagt catttaaata cttattttac ggaagaaatt
     4261 ttaggtttta aaatttcttt taaagatgaa tttttaattt atgtggaaaa ttctatgtct
     4321 tttgaagctt tgtgtgactg ggtgaaaaaa aagttaaatt tgcaaatttt acgtgtaagt
     4381 gattgtggca aaaaagacat taagcgcatt gctatatgta ctggaagtgg cggggattta
     4441 atttctaaag tagatgcgga ttgtttttta agtggagatt ttaaatatca tcaagcttta
     4501 gaggcgctta gtaatcaaat cagtcttatt gatttgggtc attttgaaag tgagagatat
     4561 ttttctcaat gtttagcaaa agacttgaaa aatttgccgc tacaagttat aataacagtt
     4621 tcaaaaaatc catttcaata tttttaagga aaataaatga ataaatatct cgaacaatta
     4681 gtgcttttat caaaaataga tcaagaaatt gatagttatg aaccaaaaat agacagtatt
     4741 aataagactt taaaagatgc tgagttaaaa atagaaaaaa tcaacgcaga tttagaaaaa
     4801 atcgatgaag aaatcaaaga tatagaaaat caaaaaatac aaaataatgc tcatatttcc
     4861 gagttttcag caaaaattaa agatctttct aaaaaaagtg gtgtggtaaa aacagaaaaa
     4921 gaagctaatg ctttaaaaat tgaagaagat attgcaaaag agcaattaga cgctgcaaat
     4981 gatgagattg taagactaga taaaatttta gagaataaag aaacttataa aaaagaactt
     5041 gaagaagaaa aaatcaaaca agagcaaaat attaacgaga ttagagtaag cattaaatct
     5101 gaaatggaag ttcttgaaaa agatagaatg agtgtttatg ataaaaaaac taaacttgtg
     5161 agtgagatga atcaaaaagt tttaagtttt tatgagaaaa ttcgcaaatg ggcgaagaat
     5221 actgctgtag ttcctgttaa aaaacaagca tgctatggat gttttatgaa aatttacgat
     5281 aagacttatc tgtccgttgt aaaaggtgaa gagattgtaa cttgtcctca ttgcggaaga
     5341 attctttata aagagcaaga agaacaaaat tgatcttttt ttattatttt ttaacttgga
     5401 cggcattttt attttgtgcc gtctttattc ttttactttc ttttttaaaa tccaaataca
     5461 aaattagttt aaaatctcga ttttttcttt ataaaaattt acatcaagaa aaagctgatg
     5521 tacattttca tgcttgttct tacggggagg taagaagtat taaagctttg gttttgaaat
     5581 ttgattcaag aataactact attactcaaa caggttttga atgtgcaaaa gaattttgta
     5641 aaaaggtaaa ttatcttgct tttgaaaatt ttttgccttt ttggcttaag ccttgtaagg
     5701 ttttggtaat ttttgaagca gaatattggc ttatgcttgt ttttatggca cgtatttata
     5761 aggctaagat tattttgctt aatgcgagaa tatctgataa gtcttatcat tcttatcaaa
     5821 gattttcttt tttttataaa aaaatttttt cttatattga tgaagttttt gctcaaagtg
     5881 atttagataa agcaagactt gaaagtttgg gagctaaaaa tg
//
LOCUS       DAPIWB010000078         5750 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.079, whole genome shotgun sequence.
ACCESSION   DAPIWB010000078 DAPIWB010000000
VERSION     DAPIWB010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5750)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5750)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5750
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.079"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            62..2167
                     /locus_tag="RJ266_001489"
     CDS             62..2167
                     /locus_tag="RJ266_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDV7355216.1"
                     /translation="MKKICLSVCAIGCLLSSNAISQNVELDSSIVSASGFTQDIKEAP
                     ATINVISKKELQSKPYRDVAEAIADIPGVDLYASKGKTGSYNITMRGITGYTLILIDG
                     RRQGIGGEVGPNGFNEISNSFLPPISSIERIEVIKGPMSTLYGSEALGGVVNIITKKV
                     SDKWETSVSLDALLNENKDWGNTYGTSIYSSGPLMNDKLGLTLRFREFYRQQSNVEFT
                     NGSGQRVPGDQAQSPTKANNFNIGTRISYLANDYNTFIFDIDFSRNHYDNKKGQLGTI
                     TKPGDTKDSLIGGYTDIMEVDKFVTYLSHEGVYENFSITSGLQYNRVSNNGREVVGQA
                     TQPFLGENRDIVAEDIILDTKSVIPLGQSHILSVGGEYRLEKMQDKIANPTNFDQYLL
                     AIFAEDEYSIKDDLRFTFGARYNHHEIFGNNVSPRAYLVYNPTDELTFKGGISTGFRT
                     PYANRLINGTYNYSGQGKFPIYGNPDLKEETSLNYEVAAIYNNDLFYVSATGFLTNFK
                     DKISTQRYGKNNMIPGIGACGADRCFKAINHGKVEYKGVELGAGISPLDNLNVNFAYT
                     YLDSEVKEAQDKSVIGKPEQDSLKHNIMLKTEYSFYNKITPWIKGEWQIDRYMGDTNI
                     NREYYKDIFLASMGVRYDINKQWSINAAIYNLFDKSFTNSWESYEITNKNSTKTAWVN
                     TYNRIEEGRRIYISINGSF"
     gene            2468..3262
                     /locus_tag="RJ266_001490"
     CDS             2468..3262
                     /locus_tag="RJ266_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HrcA family transcriptional regulator"
                     /protein_id="HDV7355217.1"
                     /translation="MMKSRDKKDLILESIIQTYLLDNAPIGSNELNSNLCIPASTIRV
                     YLKRLSDEGLITQLHISSGRIPTILTMQNYWQSFWEKEQDKNIHIKNESFLKELSKEF
                     EIYCLVYGGRSLVLKEVLDLNTKFIVLDFEDEELVLKYEKEAWNFLQSLIGLDLSSIE
                     KIALRVHFIDLVEKIASLRQNLICYRSNEERAYQIYQNDEFVKLLDCQIHRHFKESLE
                     FEPLFKEGFMGLKVDAQFLGEDVNIILAGSVYTDYKKILQYIKEAA"
     gene            3259..3786
                     /gene="grpE"
                     /locus_tag="RJ266_001491"
     CDS             3259..3786
                     /gene="grpE"
                     /locus_tag="RJ266_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HDV7355218.1"
                     /translation="MSEQKQEIENENAQNSENLQDDLQDNEKNETNELQKELEELKDK
                     YMRANAEFENIKKRMEKEKLSAMAYANESFAKDLLDVLDALEAAVNVECQDEISLKIK
                     EGVQNTLDLFLKKLEKHGVALIKDEKEFDPNLHEAMFHVDSENHQSGEVVQVLQKGYK
                     IADRVIRPTKVSVAK"
     gene            3808..5679
                     /gene="dnaK"
                     /locus_tag="RJ266_001492"
     CDS             3808..5679
                     /gene="dnaK"
                     /locus_tag="RJ266_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HDV7355219.1"
                     /translation="MSKVIGIDLGTTNSCVAVYERGESKVIPNKEGKNTTPSVVAFTD
                     KGEVLVGDSAKRQAVTNPEKTIYSIKRIMGLMINEDAAKEAKNRLPYHITERNGACAI
                     EIAGKIYTPQEISAKVLMKLKEDAEAFLGESVVDAVITVPAYFNDAQRKATKEAGTIA
                     GLNVLRIINEPTSAALAYGLDKKDSEKIVVYDLGGGTFDVTVLETGDNVVEVLATGGN
                     AFLGGDDFDNKLIDFLANEFKDETGIDLKNDVMALQRLKEAAENAKKELSSANETEIN
                     LPFITADASGPKHLVKKLTRAKFEGMIDSLVAETITKINEVVSDAGLKKDEIKEIVMV
                     GGSTRVPLVQEEVKKAFNKDLNKSVNPDEVVAIGAAIQGAVIKGDVKDVLLLDVTPLS
                     LGIETLGGVMTKIIEKGTTIPTKKEQVFSTAEDNQSAVTINVLQGEREFSRDNKSLGN
                     FNLEGIPPAPRGMPQIEVTFDIDANGILTVSAKDKATGKAQEIKITGSSGLSEEEINN
                     MVKDAELHKEEDKKRKEAVDARNAADSLAHQVEKSLSELGEKVATADKENIQKALDDL
                     RETLKNQNANKEEIESKMKALSEVSHKLAENMYKKDEPNTANDKKKKDDDVIDAEVE"
BASE COUNT         2158 a          746 c         1116 g         1730 t
ORIGIN      
        1 aattaataat tattatcata atattttgat ttctaaatca atatttaaca aaaggagaaa
       61 aatgaaaaaa atatgtctat cagtttgcgc cattgggtgt ctcttaagct ccaatgccat
      121 atcgcaaaat gtagaactag atagctcaat cgttagtgct tctggcttta cccaagatat
      181 taaagaagct cctgctacta tcaatgttat tagtaaaaaa gaattacaaa gtaagcctta
      241 tagagatgtt gcagaggcta tcgcagatat cccaggcgtt gatttatatg ctagcaaggg
      301 aaaaacaggt tcttataata ttactatgag aggtattact ggatatactt tgattttgat
      361 cgatggacgt cgtcaaggaa tcggtggaga ggttggcccc aatggtttta atgaaatttc
      421 aaattctttc ttgcccccga tttctagtat agaaaggata gaagttataa aaggtcctat
      481 gagtacttta tacggatccg aagctttagg tggggtggta aatatcatta ccaaaaaagt
      541 gagtgataaa tgggaaactt ctgtaagttt ggatgctctt ttaaatgaaa ataaagactg
      601 gggcaatact tatggaacaa gtatttattc tagtggtcct ttgatgaatg ataaattagg
      661 tctaacgctt cgttttagag aattttacag acagcaatcc aatgttgaat ttacaaatgg
      721 aagtggacaa agagttccag gagatcaagc tcaaagtcct acaaaggcaa ataattttaa
      781 cataggaaca agaattagtt atttagctaa tgattataat acctttatat ttgatataga
      841 tttttcaaga aatcattatg ataataaaaa aggtcaatta ggaactatta caaaaccagg
      901 tgatacaaaa gatagtttaa taggtggtta tactgatata atggaagttg ataaatttgt
      961 gacttattta agtcatgagg gtgtttatga aaacttttct atcacttctg gtttgcagta
     1021 taatagagta agcaataatg gacgcgaagt tgtaggacaa gctacacagc cgtttttggg
     1081 agaaaataga gatatagtcg cagaagatat tatcttagat actaagtctg ttattcctct
     1141 aggacaaagt catattttaa gcgtaggcgg tgaatatagg cttgaaaaaa tgcaagataa
     1201 aatagctaat cctactaatt ttgatcagta tttattggca atatttgcag aggatgagta
     1261 tagtataaaa gatgatttaa gatttacttt tggagcaaga tataatcatc atgaaatttt
     1321 tggaaacaat gtttcaccaa gagcttattt ggtttataat cctaccgatg aacttacttt
     1381 caaaggtggt atatctacag gctttagaac cccttatgca aatcgtttga taaatggaac
     1441 ttataattat agcggtcaag gtaaatttcc tatatatgga aatcctgatt taaaagaaga
     1501 aacatcttta aattatgaag tagcagctat ttataataat gatttatttt atgtttcagc
     1561 aacaggtttt ttaacaaatt ttaaagataa aatttcaacc caaagatatg gcaaaaataa
     1621 tatgattcca ggaattggtg cttgtggtgc tgatagatgt tttaaggcaa tcaaccatgg
     1681 taaggttgag tacaaaggtg tagagcttgg agcagggata agccctcttg ataatttaaa
     1741 tgtaaatttt gcttatactt atcttgatag cgaggttaaa gaagcacaag ataaaagtgt
     1801 gataggtaaa cctgagcagg atagtttaaa acataatatt atgttgaaaa ctgaatacag
     1861 cttctataat aaaattaccc cttggataaa aggcgaatgg caaatagatc gctatatggg
     1921 tgatacgaac atcaatagag agtattataa agatatcttt ttagcttcca tgggtgtgcg
     1981 ttatgatatc aacaaacaat ggagtatcaa tgcagctatt tataatcttt ttgacaaaag
     2041 ctttacaaat agttgggaat cttatgaaat tactaataaa aactctacta aaactgcttg
     2101 ggtaaatacc tacaatcgca tagaagaagg aagaagaata tatatttcca ttaatggtag
     2161 tttttaagct ttgatagaaa agtcaaagag cttgtaaagg cttctttgat tttttgttta
     2221 tagcatcttg tgcttttaaa aaagttaaat tatcgaatct atttaaaatt tcttatctaa
     2281 ttatcaccct gtttaccaat cttgaaatat atcctatcct tataaaaaag taactaataa
     2341 aactttagtt atatagacta aataaaatta agtatatttt tttatattta tacttgacaa
     2401 aataacactc aatgttgtat aatatatcta gcaatcaaaa aatagagtgc tagctttaaa
     2461 ggaaaacatg atgaaaagtc gagataaaaa ggatttgatt ttagagtcta ttatccaaac
     2521 ttatcttttg gataatgcac ctattggttc taatgaatta aattcaaacc tttgtatacc
     2581 tgcttcgact atacgcgttt atcttaaaag acttagcgat gagggtttga tcactcagct
     2641 tcatataagt agtggtagaa ttcctactat tttaacgatg caaaattatt ggcaaagttt
     2701 ttgggaaaaa gaacaagata aaaatatcca tatcaaaaac gaaagctttt tgaaagagtt
     2761 aagtaaagaa tttgaaattt attgtcttgt ttatggaggt agaagtttag tacttaaaga
     2821 agtgctagat cttaatacta aatttatagt gcttgatttt gaagatgaag agctggtttt
     2881 aaaatacgaa aaagaagcgt ggaatttttt acaaagtctt atagggcttg atctttctag
     2941 tatagaaaaa atagctttga gagttcattt tatagatctt gtagaaaaaa tagctagctt
     3001 aagacaaaat ttgatttgct atagaagcaa tgaagaaaga gcttatcaaa tttatcaaaa
     3061 tgatgaattt gttaagctct tagattgtca aattcaccgt cattttaaag aaagtcttga
     3121 atttgaacct ttatttaaag aaggttttat ggggcttaag gtagatgcgc agtttttggg
     3181 cgaagatgta aatattatct tagcaggtag tgtttatacg gattataaaa agatattaca
     3241 atacataaag gaggcggcat gagcgaacaa aagcaagaaa ttgaaaatga aaatgcacaa
     3301 aattctgaaa atttgcagga tgatttgcaa gataatgaaa aaaacgaaac aaatgaatta
     3361 caaaaagaat tagaggaatt aaaagataaa tatatgcgtg caaacgctga atttgaaaat
     3421 attaaaaaaa gaatggaaaa agaaaagcta agtgctatgg cttatgcaaa tgaaagcttt
     3481 gcaaaggatt tgcttgatgt tttagatgct ttagaagcag ctgttaatgt cgaatgccaa
     3541 gatgaaatta gcttaaaaat caaagaagga gtgcaaaata ctttagattt atttcttaag
     3601 aaacttgaaa aacatggggt ggctcttatc aaagatgaaa aagagtttga tcctaattta
     3661 cacgaagcaa tgtttcatgt agatagtgaa aaccatcaaa gtggtgaagt ggttcaagtg
     3721 cttcaaaaag gttataaaat agccgatcgc gtgatccgcc caaccaaagt tagtgtagca
     3781 aaataaattt taataaaagg ataaaaaatg agtaaagtta taggtataga tttaggaaca
     3841 accaattctt gtgttgctgt gtatgaacgc ggcgagagca aagtaatccc aaacaaagaa
     3901 ggaaaaaaca caactccttc agtggtagct tttacagata aaggcgaagt tttagtaggc
     3961 gatagtgcaa aacgccaagc ggtaaccaac cctgaaaaaa ccatttattc tatcaaaaga
     4021 attatgggtt taatgatcaa tgaagatgcg gctaaagaag ctaaaaatag acttccttac
     4081 cacatcaccg aaagaaatgg tgcgtgcgca atagaaatcg caggtaaaat ttacacccca
     4141 caagaaattt cagcaaaagt tttgatgaaa ttaaaagaag atgcagaagc ttttttgggt
     4201 gaaagtgttg tagatgcggt gattactgtg cctgcttatt ttaacgatgc acaaagaaaa
     4261 gcgacaaaag aagcgggaac gatagcagga cttaatgtat taagaattat caatgagcct
     4321 acttcagcag ctctagctta cggacttgat aaaaaagata gtgaaaaaat tgtggtttat
     4381 gatctaggtg ggggaacttt tgacgttact gtgcttgaaa ctggcgataa tgtagtagaa
     4441 gttttagcaa caggtggtaa tgctttctta gggggcgatg attttgataa taaacttatt
     4501 gattttctag ctaatgaatt taaagatgaa acaggcatag atcttaaaaa tgatgttatg
     4561 gctctacaac gcttgaaaga agcagcagaa aatgctaaaa aagaattaag ctcagctaat
     4621 gaaactgaaa ttaatttacc atttatcaca gcagatgcaa gtgggccaaa acatttggtt
     4681 aaaaaactta ctagagctaa atttgaaggt atgattgatt ctttagtagc tgaaaccatc
     4741 actaaaatca atgaagtagt aagcgacgca ggtcttaaaa aagatgagat taaagaaatt
     4801 gttatggtag ggggctctac tcgtgttcct ttagtgcaag aagaagtgaa aaaagccttt
     4861 aataaagatc ttaacaagtc cgtaaatcct gatgaagttg tggctattgg tgcggcgatt
     4921 caaggtgcgg ttataaaagg cgatgttaaa gatgtgcttt tacttgatgt tactccgctc
     4981 tctttgggta tagaaactct aggcggggta atgactaaga ttatcgaaaa aggtacaact
     5041 attccaacta aaaaagagca agttttctca accgctgaag ataatcaaag tgctgtaact
     5101 atcaatgttt tacaagggga aagagaattt agtcgtgata ataaatcttt aggaaatttt
     5161 aatcttgaag gaattccacc agcaccacgc ggtatgccac aaatcgaagt tacttttgat
     5221 atcgatgcaa atggtatttt aaccgttagc gcaaaagata aagcaacagg taaggctcaa
     5281 gagatcaaaa tcacaggttc aagcggactt agcgaggaag agattaataa catggtaaaa
     5341 gatgctgaac ttcacaaaga agaagacaaa aaacgcaaag aagctgtaga tgctagaaat
     5401 gcagctgata gcttggcgca tcaagtagaa aaatctttaa gtgagttggg tgaaaaagtt
     5461 gccactgctg ataaagaaaa tattcaaaaa gctcttgatg atttgcgtga gactttgaaa
     5521 aatcaaaatg caaacaaaga agagattgaa agcaaaatga aagctttaag tgaagtttct
     5581 cataagttag ctgaaaatat gtataaaaaa gatgagccaa acacagcaaa cgataaaaag
     5641 aaaaaagatg acgatgtaat cgacgctgaa gttgagtaat cttctaaaat ctccattcaa
     5701 gcctttttaa aaggcttgaa ctcaattcta ttttatctta tttaattttt
//
LOCUS       DAPIWB010000079         5692 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.080, whole genome shotgun sequence.
ACCESSION   DAPIWB010000079 DAPIWB010000000
VERSION     DAPIWB010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5692)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5692)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5692
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.080"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            27..158
                     /locus_tag="RJ266_001493"
     CDS             27..158
                     /locus_tag="RJ266_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7355220.1"
                     /translation="MSMKKIILFLLCVGFAFACSEHSHTDFKDLNKTEYNSQLKDKI"
     gene            155..1159
                     /locus_tag="RJ266_001494"
     CDS             155..1159
                     /locus_tag="RJ266_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV7355221.1"
                     /translation="MKKIFFMFLTAVSFLGASELNIYSARHYNADFEIIKKFEEKTGI
                     KVNHTQAKASELIKRLSLEGSNSPADIFITADISNLTEAKNLGLLSPVSSKYLEEFIP
                     AHLRDKDKEWFAITKRARIIAYNKNANIDISKMKNYEDLAKAEFKGEIVMRSATAPYS
                     KTLLASIIANDGNKEAKAWAKGVLENLATNPKGGDRDQARQVFAGEAKFAVMNTYYIG
                     LLKNSKNPKDVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQDAAKKFMEFMLSP
                     EIQKILTDSNYEFPIRNDVELSQTVKDFGTFKEDQIPVSKIAENIKEAVKIYDEVGFR
                     "
     gene            1159..2775
                     /locus_tag="RJ266_001495"
     CDS             1159..2775
                     /locus_tag="RJ266_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDV7355222.1"
                     /translation="MYKTLKYYKLGAILLALFLALPIFGIFAELFYILFQNFNTSNLT
                     QFSSIKENLSHFFDYLFLKFIKDTFIISVGVLCLSLILGVSSAYLIANYDFYFCKILE
                     KLLILPLAIPAYILAFVYVGIMDFQGFFHENFGFRMDFFNHYGVIFVLAISLYPYIYL
                     FAKTAFKSEAKEAYEVAKIMKYSEFRIFTRVALLSARPAIFSGALLVLMETLSDYGAS
                     AYLGVDTFSAGIFKLWYDLNDSYSSSVLSGILMLFVFLIMYVDYYYKNKHHYSFNQNL
                     TLFIKKRKLNPIKQILSCIYCFMIAFVGFILPFIWLVYWGLKDHKLFESQFYIISFQT
                     IILALVTALITTFLAYFLMFSSRIVKNHFFNLFILKISSLGYSIPAAALGISIIVLFV
                     FLDKIFHMSLLGNSLLVLIFAYIIRFLASAIYSLEGGYNKIHLNIDEASLNLRASYFI
                     LFFKIHTPLMKHFLFLAFIIVFIDTIKELPLSRILAPFGFETLSVKAFWFASDERIYD
                     AALPSLFIVFLSLMVVVWMDKITRKDDVRN"
     gene            2759..3667
                     /locus_tag="RJ266_001496"
     CDS             2759..3667
                     /locus_tag="RJ266_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7355223.1"
                     /translation="MMLEIKNLSKNFEKIQALENINLHVKEGEFLSILGGSGSGKSTL
                     LRIIAKLEQASSYDLFSCKGEVALMFQNYALFPHLNVEKNILFALYDKKDKNQILNHL
                     LKTFEIEDLRYKKIDEISGGQAQRVAFARAIARGCQLLLLDEPFSNLDQNLKQDLRRE
                     LKKMIENQGITAIMVTHDIEDAYCMSDQIAFLEKGKILAHANPKELYFKPDFKSAQIL
                     PDLNIIEEKLDLEDEFFAWIASKNYIFGYAELKIGNRFEAKILQKEFLGAFYRLKLRY
                     KNIEFFMLLSSNYNLEEKINFDIINF"
     gene            3703..4908
                     /locus_tag="RJ266_001497"
     CDS             3703..4908
                     /locus_tag="RJ266_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase family protein"
                     /protein_id="HDV7355224.1"
                     /translation="MKNLLIIGAGGVSRVATVKCAMNSDTFSKITLASRTKSKCDEIA
                     TFIKERLGVQIKTAQIDADDSNAVVELIKKTGAQILLNVALPYQDLSLMDACIKAGID
                     YIDTANYEHPDLAKFEYKEQWARNDEFKQARILGLLGSGFDPGVTNVFCAYAQQNLFD
                     EISYIDILDCNAGDHGYAFATNFNPEINLREVSAKGRYWENGKWIETQPMEIKMEWDY
                     PEVGVKDSYLLYHEELESLVKNIKGLKRIRFFMTFGQSYLTHMKCLENVGMLGIKPVI
                     HQGKEIIPIEFLKTLLPDPASLGPRTKGYTNIGCVIRGKKDGKDKQVYIYNVCNHEEC
                     YKETGAQAVSYTTGVPAMIGTKLIAKGIWQGKGVFNMEEFDAKPFMEELNSQGLPWKI
                     IEMTPSLGE"
     gene            complement(4936..5598)
                     /gene="sodB"
                     /locus_tag="RJ266_001498"
     CDS             complement(4936..5598)
                     /gene="sodB"
                     /locus_tag="RJ266_001498"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Fe]"
                     /protein_id="HDV7355225.1"
                     /translation="MFELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIKD
                     TEFAGKDLVSIIKTSNGGVFNNAAQVYNHDFYFDCIKPSTGCGCGGSCQSIDANLQVA
                     LEKEFGSLENFKAEFIKGATGVFGSGWFWLVYNTKNQKLEFVGTSNAATPITEDKVPL
                     LVVDVWEHAYYVDHRNARPAYLEKFYAHINWGFVAKAYEWALKEGMGSVSFYANELHP
                     VK"
BASE COUNT         1951 a          722 c          965 g         2054 t
ORIGIN      
        1 cttatcaaaa tatctaaaag gaattaatgt ctatgaaaaa aataatttta tttttactat
       61 gcgttggctt tgcttttgct tgctctgaac attctcatac cgactttaaa gatcttaata
      121 aaaccgagta taattctcaa ttaaaggata aaatatgaaa aaaatcttct ttatgttttt
      181 aacggctgtt tcatttttag gtgctagtga gcttaatatt tactcagcaa gacattataa
      241 tgctgatttt gaaatcataa aaaaattcga agaaaaaaca ggtattaagg tcaatcatac
      301 tcaagctaaa gcttcagaac ttattaaaag actttctctt gaaggaagta attctcctgc
      361 tgatattttc atcacagctg atatttcaaa tcttacagaa gctaagaatt taggactttt
      421 atcccctgtt tcatcaaaat atttagaaga atttataccc gctcatttaa gagataagga
      481 taaagaatgg tttgcgatta caaaaagagc aagaattatt gcttacaaca aaaacgcaaa
      541 tatcgatatt agcaaaatga aaaattatga agatttagca aaagctgaat ttaaaggaga
      601 aattgttatg agaagtgcta cagctcctta tagcaaaact cttttagcat ctattatagc
      661 taatgacgga aataaagagg ctaaagcatg ggctaaaggt gtgcttgaaa atcttgcgac
      721 aaatccaaag ggtggggata gagatcaagc cagacaagta tttgcaggcg aagctaaatt
      781 tgcagttatg aatacttatt atatagggct tttaaagaat tctaaaaatc caaaagatgt
      841 agaagtgggg aattctttgg gtattatttt tcctaatcaa gacaatagag gaacgcatat
      901 taacattagc ggtattgcta tgacaaaatc aagtaaaaat caagatgcgg ctaaaaaatt
      961 tatggaattt atgttaagtc ctgaaattca aaaaattctt actgatagta attatgaatt
     1021 tcctataaga aatgatgtag aattaagcca aacggtaaaa gattttggaa ctttcaaaga
     1081 agatcaaatc cctgtgagta agatagcaga aaatattaaa gaagctgtta aaatttacga
     1141 tgaagtcggt tttagataat gtataaaacc ttaaaatact ataaactcgg ggcaatttta
     1201 cttgcccttt ttcttgcttt gcctattttt ggtatttttg ctgaactttt ttatatttta
     1261 tttcaaaatt ttaatacaag taatttaacc caattttcat ctattaaaga aaatttgagt
     1321 catttttttg attatttatt tttaaaattc atcaaagata cttttataat tagcgtggga
     1381 gtattgtgtt taagcttgat tttgggtgta agttctgctt atttgatcgc aaattatgat
     1441 ttttatttct gtaaaatttt agaaaaatta ctcattttac ccttggccat acctgcttat
     1501 attttagcct ttgtttatgt tggaattatg gattttcaag gattttttca tgaaaatttt
     1561 ggctttagga tggatttttt caatcattat ggtgttattt ttgttttggc tatttcttta
     1621 tatccttata tttatttatt tgctaaaaca gcttttaaaa gtgaagccaa agaggcttat
     1681 gaagtagcta aaatcatgaa atattctgaa tttagaattt ttacacgcgt ggcacttttg
     1741 agcgcaaggc ctgccatttt ttctggagct ttattggttt taatggaaac tttaagtgat
     1801 tatggcgcaa gtgcttattt gggagtggat actttttcgg ctggaatttt taaactctgg
     1861 tatgatttga atgattctta ttcttctagt gttttatcgg gtattttaat gctttttgta
     1921 tttttgatta tgtatgtgga ttattattat aaaaataaac atcattatag ttttaatcaa
     1981 aatttaactc tttttatcaa aaaaagaaaa ttaaatccta ttaaacaaat tctatcctgt
     2041 atttattgtt ttatgattgc ttttgtaggt tttattttac cttttatttg gctagtttat
     2101 tgggggttaa aagatcataa gctttttgaa tcacaatttt atattatcag ttttcaaact
     2161 ataatcttag ctttagtcac tgctttaatt accacttttt tagcttattt tttgatgttt
     2221 agttctagga tagttaaaaa tcattttttt aatttattta ttttaaaaat aagttctttg
     2281 ggttattcta tacctgctgc tgctttaggg attagcatta tagtgctttt tgtatttttg
     2341 gataaaattt ttcacatgag tttattggga aattctttac ttgttcttat ttttgcttat
     2401 ataattcgtt ttttagcgag tgcaatttat tctttagaag gaggatataa taaaattcat
     2461 ctaaatattg atgaggcaag tttaaattta agagcgagtt attttatttt attttttaaa
     2521 attcacacac ctttaatgaa acatttttta tttttggctt ttattattgt ttttattgat
     2581 acgattaaag aacttccttt aagtagaatt ttagcgcctt ttggctttga aactttaagt
     2641 gttaaagctt tctggtttgc aagtgatgaa agaatttatg atgcagcttt gccttccttg
     2701 tttatcgttt ttctttcttt aatggttgtt gtttggatgg ataaaatcac aaggaaagat
     2761 gatgttagaa attaaaaatt tatctaaaaa ttttgaaaaa atacaagctt tagaaaatat
     2821 caatcttcat gtcaaagaag gagaattttt aagcatttta ggaggtagtg gaagtggaaa
     2881 aagcacgctt ttaaggatta ttgctaagct tgaacaagct agttcttatg atttgttttc
     2941 ttgcaaaggt gaagtggctt tgatgtttca aaattatgct ttatttcctc atttaaatgt
     3001 tgagaaaaac atactttttg cactttacga taaaaaagat aaaaatcaaa ttttaaatca
     3061 tttgcttaaa acttttgaaa ttgaagattt aagatataaa aaaatcgatg aaatttcagg
     3121 agggcaagcg caaagagtgg cttttgctag agctatagca agaggatgtc agcttttgct
     3181 tttagatgaa cctttttcta atttggatca aaatttaaaa caggatttaa gaagagaatt
     3241 gaaaaaaatg atagaaaatc aaggcattac ggctattatg gtaactcatg atattgaaga
     3301 tgcttattgt atgtctgatc aaatcgcttt tttagaaaaa ggaaaaattt tagctcatgc
     3361 aaatcctaaa gagctttatt ttaagcccga ttttaaaagt gcgcaaattt tacctgattt
     3421 aaatatcata gaagaaaaac ttgatttaga agatgaattt tttgcttgga tagcttcaaa
     3481 aaattatatt tttggttatg cagaacttaa aataggaaat cgctttgagg ctaaaatttt
     3541 acaaaaagaa tttttagggg ctttttatag acttaagtta agatataaaa atatagaatt
     3601 ttttatgtta ttaagctcaa attataactt agaagaaaaa ataaattttg atattatcaa
     3661 tttttagtta aaattcctaa aaatctttta aggacaaatt tcatgaaaaa tcttttaatc
     3721 ataggcgcag gtggagtaag tcgtgtggct actgtaaaat gcgcaatgaa ttctgatact
     3781 tttagcaaaa tcactttagc tagtagaaca aaaagcaaat gtgatgaaat cgctactttt
     3841 atcaaagagc gtttaggggt tcaaattaaa acagcgcaaa ttgatgctga tgatagcaat
     3901 gcggttgtag aacttatcaa gaaaacagga gcgcaaattt tactcaatgt tgctttgcct
     3961 tatcaagatt tgagtttaat ggatgcttgt ataaaagcag ggattgatta tatagatacg
     4021 gcaaattatg aacatcctga tttagctaaa tttgaataca aagagcaatg ggcgagaaat
     4081 gatgagttta aacaagcaag aattttagga cttttaggaa gtggatttga tcctggtgta
     4141 actaatgttt tttgtgctta tgcacagcaa aatttatttg atgaaatttc ttatatagat
     4201 attttagatt gcaatgcagg tgatcatggc tatgcttttg cgacgaattt taaccctgaa
     4261 atcaatctgc gtgaggtttc tgctaaaggg cgttattggg aaaatggcaa gtggatagaa
     4321 acgcagccta tggaaataaa aatggagtgg gattatccag aagtaggagt gaaagatagc
     4381 tatttgcttt atcatgaaga acttgaaagc ttggtaaaaa atatcaaagg tttaaaaaga
     4441 atacgctttt ttatgacttt tggacaaagt tatttaactc acatgaaatg tcttgaaaat
     4501 gttggaatgc tagggattaa acctgtgata caccaaggta aagaaatcat tcctatagaa
     4561 tttttaaaaa ccttgcttcc tgatcctgca agtttaggac cacgcactaa aggttatacc
     4621 aatataggtt gtgtgattcg tggtaaaaaa gatggaaaag acaaacaagt ttatatttat
     4681 aatgtttgca atcatgaaga atgttacaaa gaaactggcg cgcaagctgt gagctatact
     4741 acaggtgttc ctgctatgat aggtacgaaa ttaatcgcta aaggaatttg gcaaggaaaa
     4801 ggcgtgttta atatggaaga atttgacgct aagcctttta tggaagagct gaattctcaa
     4861 ggacttcctt ggaagattat cgaaatgact ccaagcttag gagagtaaag aaggcatcgt
     4921 tttgatgcct ttaaattatt ttacagggtg aagttcattt gcataaaagc taactgatcc
     4981 catgccttct tttaaagccc attcgtaagc ttttgcaaca aatccccagt taatatgagc
     5041 atagaatttt tctaaataag cagggcgtgc attacgatga tctacataat aagcatgttc
     5101 ccaaacatct acaacaagta aaggaacttt atcttcagta attggtgtag ctgcgtttga
     5161 agtacctaca aattctagtt tttgattttt agtattataa actaaccaaa accatcctga
     5221 accaaaaact cctgtagcgc ctttgataaa ttcagctttg aaattttcta aagatccaaa
     5281 ttctttttct agtgccactt gtaaattagc atctatactt tgacatgaac cgccacagcc
     5341 acagcctgta cttggcttaa tgcaatcaaa ataaaaatca tgattataaa cttgagctgc
     5401 gttattaaat acgcccccat ttgaagtttt gataatactt acaagatctt tacctgcaaa
     5461 ttcagtatct ttaataagat tatttagatt tgtaacataa gtattgtgat gttttccatg
     5521 atgatagcta aaagtttcag cactcaaaaa atcaccaaaa gcattggtat cataaggtaa
     5581 ttttcttaat tcaaacataa tttctccttt atttttagtt tgatattgaa aatattacca
     5641 taataatatt aaaaagagta aaaatatctt aaaagcttag tgggtaaaat tt
//
LOCUS       DAPIWB010000080         5545 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.081, whole genome shotgun sequence.
ACCESSION   DAPIWB010000080 DAPIWB010000000
VERSION     DAPIWB010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5545)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5545)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5545
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.081"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            130..1623
                     /locus_tag="RJ266_001499"
                     /pseudo
     CDS             130..1623
                     /locus_tag="RJ266_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002894998.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
     gene            1616..2947
                     /locus_tag="RJ266_001500"
     CDS             1616..2947
                     /locus_tag="RJ266_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="McrC family protein"
                     /protein_id="HDV7355226.1"
                     /translation="MNSIFSIIEYQAFSKEDLKEIFKEKAEGFYKELEDFAKNNENLL
                     GFKNKNSLKAKNYVGIIQTKSGVLEILPKCTNLDSYKKEDSSSNHDKEKLRRCYELDN
                     ISKNNDFYEKDFKFNPKNLLINMLKTLKNSPFKKSQISSLQSSKIPLFEVFITMFLDE
                     FDSVYKKGLMRSYLSCEENRAFLKGKLLFNEHIKRNLIHKERFFTSNDEFVLDIAPNR
                     LIKSTLNFLKSKTSLNKFRLIKSMQILDEVEFSKNYEKDFSYKISRHFDYYENLLLWC
                     KIFLKNESFMPYHGKNEAFALLFPMEKIFEDYVAYMLKKVNPAQDIKVQNNGKYLISK
                     NDENCFMLKPDLYIENKMILDTKWKIPNDSEDEKKQGIEQSDLYQMFAYACKFKIYDI
                     KLVYPLCEKTQDLQRKIAEKFFVFKASEHLYFKEQGQKDIKVQVLFAPLPF"
     gene            complement(2936..3739)
                     /locus_tag="RJ266_001501"
     CDS             complement(2936..3739)
                     /locus_tag="RJ266_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDV7355227.1"
                     /translation="MLEILNFTFFQNALLGAILVSIACGIIGTLVMINRLFSMAGGIT
                     HGAFGGIGIAFYFSLPILLSTGIFTLFLAFLVAFLAKHYEHRSDSIIAVIWAFGMAVG
                     IILIDLSPSYNTDLMAYLFGSILAVGTQDLWLMALVDSVVVLLIFLFYRQFEALSFDA
                     EFAKVRGINTSFFHYLLIALMAFCIVISIRLVGLILVMALLSIPSFIAENFTKRLGFI
                     MILASFLSMIFCVLGLILSYYLNLSSGACIIAVACFGFLVHLIGKFLKR"
     gene            complement(3732..4586)
                     /locus_tag="RJ266_001502"
     CDS             complement(3732..4586)
                     /locus_tag="RJ266_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HDV7355228.1"
                     /translation="MLFFEISNLNYAYNNEIILKNINLSYDNKDFLSIIGPNGAGKST
                     LVKLILGLLKSKNEIHFKALQRKEIGYVPQHTLANPNFCPRVLEIVLMGLVSKKIFGF
                     YGKKDKEKAIQALKSVGMEKFWNKTIDSLSGGQRQRVFIARALASECKMLILDEPTAS
                     VDNKSAIQIFELLSSLHQKGMGILLICHDINLVLAYSDKIAHLNKELFLHTNTKEKEK
                     SSFLKHLYENHSHFCDVEMSLNTCFCDEENCDSKKLCEQEFTRRNLKKTEFKKENFCL
                     KFSKENNA"
     gene            complement(4599..5489)
                     /locus_tag="RJ266_001503"
     CDS             complement(4599..5489)
                     /locus_tag="RJ266_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HDV7355229.1"
                     /translation="MKKIILFILSLGIFYTFTQAKNLEQEQNTSSNLVSVSIAPQAFF
                     VKKIAANTLDINVILPPNSNEHNFEFKPSTMKKLEKSDIYFTIGLEFEKVFTDKFKQN
                     FPKLQVVNMQKNIALIQTHDTHEHSHEHEHHEHEHFDPHTWLDPILVQTMALNIYDTL
                     IQKYPQNENLYKENLDKFLAELDSLNLQIASKLEKLKNREFVVYHPSWTYFAKRYNLT
                     QIPVEILGKEPKSKDLQKLITLMKNKNLKVIFVQNGFPENAAKTLAKECDAKIYKIDH
                     LSYDWENELLKTADTFSHNL"
BASE COUNT         2157 a          689 c          822 g         1877 t
ORIGIN      
        1 gatgaatttc acacaaaaag tcaaggtgat aaatggactt cttctattct taattattta
       61 aaaactatga gtaaagatgg agaaatattt tatagatatt ataaaaattg caaatttttt
      121 gctataccaa aaaatacatt ttctaaagat gattttaaaa ttataaagga taatataaat
      181 aataatatat ccttaaacca aattctttat gggtctccag ggacaggaaa aacttatcat
      241 actatagata aggctttgga aatcttgggt gaaaatttag aaagtagaga tgagaaaaaa
      301 gctaaatttg atgagtatgt aaaaaatgga caaatagtat ttactacttt tcatcaaagc
      361 tacggatatg aagaatttgt agaaggtata aagcctagtt taaatagtga tgaaaattcg
      421 caaattaatt ataaggttaa agatggaatt tttaaagagc tttgcaagaa agctttggag
      481 aatagagatg acatagaaag ttttaatttt tatataaatg acttgaaaga aaaaacaaaa
      541 gaagatgcca ataatcctga aaaatatttt caattgccaa atacaaaata ttctattcaa
      601 tatagaggtg gaaaaacatt tagaattaaa tttgatgata tgagcaaaaa tcataaagac
      661 tatccagtaa gtatagataa tatagaaaaa ttatataaaa cttctaatat agatgaaata
      721 tataattcag catatgttaa agctatctta aactatttga aatcacaagg tttaaaagat
      781 tataaagaaa aagatgaaaa aataaattta ccttatataa tcattataga tgaaatcaat
      841 cgtggtaatg taagtaagat ttttggtgag cttataacct tgatagagcc tagtaagaga
      901 ttaggaaatg aagaagcatt agaattaact ttgccttata gtggtgaaaa attcggagtg
      961 cctaaaaatg tttatatcat aggcactatg aatacagccg atagaagcat aacttctctt
     1021 gatacagctt taagaagaag atttgaattt gttgagatga tgcctaattc tgatttactt
     1081 aataatgttt ttatttgtaa agatgtagaa aatccaaatg aagacgaaga ttatttagga
     1141 gatgatgcta aaacagaggg ttatgcagag atacttcaaa atattttaat aagtataaat
     1201 aaaagaattg aatttttatt agatagagaa aaaactatag ggcatgcatt ttttatgagt
     1261 gaagctgtta aatttaataa aaataattgg attaagccag atgaatatga agaagattgg
     1321 tatgttttaa gtatctcaaa gttaaaaaaa gtttttcaaa acaaaattat cccgcttttg
     1381 caagagtatt tttataatga ttatgctttg attaatgcgg ttttaaatga taatggtatg
     1441 atttttgaag ataaaaaaga cgataaatat cttcaaaaaa taaaaaatct agatagtgtt
     1501 aatagcgaga gaagtattta taatattgct tcatttgatg ataaaatttg ggataaaata
     1561 gaaatatatc aagcaattta taatgatgaa atagcaaata aattaaaaaa cgaaaatgaa
     1621 tagtattttt tccatcatcg aataccaagc tttttctaaa gaagatttaa aagaaatttt
     1681 caaagaaaag gccgaagggt tttataaaga gctagaagac tttgcaaaaa ataatgaaaa
     1741 tcttctaggc tttaaaaaca aaaattcctt aaaagctaaa aattatgtcg gcattataca
     1801 gactaaaagc ggggttttgg agattttgcc aaaatgcacg aatttagata gttataaaaa
     1861 agaagatagt tcttcaaatc atgacaaaga aaaactaaga agatgttatg aattagacaa
     1921 tatttctaaa aataatgatt tttatgaaaa agattttaaa tttaatccta aaaatctttt
     1981 gataaatatg ctaaaaacct taaaaaactc cccctttaaa aaatcgcaaa tttcatcttt
     2041 gcaaagttct aaaattcctt tatttgaagt gtttatcact atgtttttag atgaatttga
     2101 tagcgtatat aaaaaaggct tgatgagatc ttatctaagt tgcgaagaaa atagggcttt
     2161 tttaaaggga aaattactat ttaacgagca tatcaagcga aatttgatac acaaagaaag
     2221 attttttaca agcaatgatg agtttgtttt agatatagca cccaatcgtt tgataaaatc
     2281 aacgctaaat tttttaaaat caaaaacaag tttgaataaa tttagactta taaaatctat
     2341 gcaaattctc gatgaggtag aattttctaa aaattatgaa aaagatttta gttataaaat
     2401 ttcaagacat tttgattatt atgaaaactt gcttttgtgg tgtaaaattt tcttaaaaaa
     2461 tgaaagtttt atgccttatc atggtaaaaa tgaagctttt gctttgcttt ttcctatgga
     2521 gaaaattttt gaagattatg tagcttatat gctaaaaaaa gtaaatccag ctcaagatat
     2581 taaagttcaa aacaatggaa agtatttaat ctcaaaaaat gatgaaaatt gtttcatgtt
     2641 aaagcctgat ttatatatag aaaataaaat gatcctagat accaaatgga aaattccaaa
     2701 tgatagtgaa gatgagaaaa aacagggtat agaacaaagc gatttgtatc aaatgtttgc
     2761 ttatgcttgc aaatttaaaa tttatgatat taaacttgtg tatcctttat gtgaaaaaac
     2821 tcaagattta caaagaaaaa tcgcagaaaa attttttgtt tttaaggcaa gcgaacattt
     2881 gtattttaaa gaacaagggc aaaaagatat aaaagtgcaa gtgctattcg cacctttacc
     2941 tttttaaaaa tttgcctatc aaatgcacta aaaaaccaaa acaagctaca gctatgatgc
     3001 aagcaccgct tgagagatta agataatagc taagtataag tcctaaaaca caaaaaatca
     3061 tacttaaaaa acttgccaaa atcatgataa agccaagtct tttagtaaaa ttttcagcaa
     3121 taaagcttgg gatactaagt aaagccataa ctaaaataag ccctacaagg cgtatagaaa
     3181 taactataca aaaagccata agggcgatta aaagataatg aaaaaaactt gtattgatac
     3241 cacgaacttt tgcaaattcc gcatcaaagc ttaatgcttc aaattgtcta taaaataaaa
     3301 agatcaaaag taccaccacg ctatcaacca aagccataag ccataaatct tgtgttccta
     3361 cagccaaaat gctcccaaaa agataagcca ttaaatctgt gttataacta gggcttaaat
     3421 cgattaaaat aatcccaaca gccattccaa aagcccagat tacagcgata atactatcac
     3481 ttctgtgttc atagtgttta gctaaaaaag ctactaaaaa agccaaaaat aaagtaaata
     3541 ttcccgtgct taataaaata ggtaaagaga aataaaaagc tatacctata ccaccaaaag
     3601 ccccatgtgt tatacctcca gccatagaaa aaaggcgatt tatcatcacc aaagtaccta
     3661 tgatcccaca agctatactg actaaaatcg ctcctagtaa agcgttttga aaaaaggtga
     3721 aatttaaaat ttcaagcatt attttccttt gaaaatttta aacaaaaatt ttctttttta
     3781 aattctgttt ttttcaaatt tcttcttgta aattcttgtt cgcatagttt tttactatcg
     3841 caattttctt catcgcaaaa acaagtattt aaactcattt ctacatcaca aaaatgagag
     3901 tggttttcgt ataagtgttt taaaaatgaa cttttttctt tttctttagt attggtatgc
     3961 aagaaaagtt ctttgtttaa atgtgcaatt ttatcgctat aagctaatac aaggttgata
     4021 tcgtgacaaa tgagtaaaat tcccatacct ttttggtgca aggagcttag aagttcaaaa
     4081 atttgtatag cagacttgtt atcaacgctt gcggtaggtt catctaaaat aagcatctta
     4141 cattcactag ctaaggctct tgcgataaaa acacgttgtc tttgtccccc gcttagagaa
     4201 tcaattgttt tgttccaaaa tttttccatt cctacgcttt ttaaagcttg tatagctttt
     4261 tctttatctt ttttcccata aaaaccaaaa atttttttac ttacaagtcc cataagaacg
     4321 atttcaagta ctcttggaca aaaattagga ttggctagag tgtgttgagg aacatagcct
     4381 atttcttttc tttgaagagc tttgaagtgg atttcatttt tggattttaa aagtcctaag
     4441 ataagtttta cgagtgttga ttttcctgcg ccatttggac ctatgataga gagaaagtct
     4501 ttattgtcat agctaagatt gatgtttttt aagatgattt cattattata agcgtagttt
     4561 agattagaaa tttcaaaaaa aagcatcaaa aaacctgatt ataaattatg agaaaaggta
     4621 tcagcagttt ttaaaagctc attttcccaa tcataagata aatgatctat tttgtaaatt
     4681 tttgcatcac attctttagc aagtgttttt gctgcatttt cagggaaacc attttgaaca
     4741 aaaatgactt ttaaattttt atttttcatt agagtgataa gtttttgcaa atctttgctt
     4801 tttggttcct tgcctaaaat ttctacagga atttgcgtaa gattatagcg ttttgcaaaa
     4861 tatgtccaag aaggatgata aactacaaat tctctatttt ttaatttttc taattttgag
     4921 gcaatttgta aatttaaact atctaattct gctaaaaatt tatctaaatt ttctttatat
     4981 aaattttcat tttgtggata tttttgaatt aaggtgtcat aaatatttaa agccatagtt
     5041 tggactaaaa taggatctag ccaagtatga ggatcaaaat gctcatgttc gtggtgttca
     5101 tgctcatgag agtgttcgtg tgtatcatga gtttgaatca aagctatgtt tttttgcata
     5161 tttacaactt gaagttttgg aaaattttgt ttaaatttat ccgtaaaaac tttttcaaat
     5221 tctaagccta tagtgaaata aatatcactt ttttcaagtt ttttcatagt acttggttta
     5281 aattcaaaat tatgctcatt gctatttggg ggcaaaataa cattgatatc tagagtattt
     5341 gcagctattt ttttaacaaa aaatgcttga ggtgctatac tgacactaac taaattgcta
     5401 ctagtatttt gttcttgctc taaattttta gcttgtgtga aagtataaaa tatccctaaa
     5461 gataagataa ataatataat ttttttcaaa atatttcctt tcgatataaa tttttaaatt
     5521 ataacgatat taagcttaat acata
//
LOCUS       DAPIWB010000081         5510 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.082, whole genome shotgun sequence.
ACCESSION   DAPIWB010000081 DAPIWB010000000
VERSION     DAPIWB010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5510)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5510)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5510
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.082"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            290..832
                     /locus_tag="RJ266_001504"
                     /pseudo
     CDS             290..832
                     /locus_tag="RJ266_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873064.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase Cbb3"
     gene            1063..1275
                     /locus_tag="RJ266_001505"
     CDS             1063..1275
                     /locus_tag="RJ266_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C"
                     /protein_id="HDV7355230.1"
                     /translation="MPQGAPDLSLEDAYDVAAYMNSQARPIKANRDEDFPNRKVKPLD
                     MDVGPYDDSFSTTQHRYGPYTNMIKK"
     gene            complement(1309..1950)
                     /locus_tag="RJ266_001506"
     CDS             complement(1309..1950)
                     /locus_tag="RJ266_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HDV7355231.1"
                     /translation="MRNFFCKFVLALVFYSSFALANNSFITLNPSLPNSENSVIEAFS
                     YKCIHCYNHHKFGTLEKLREAFPNLHFKLYPVSLMNGEFSKEMNELFAFAQYKDKQNG
                     KDASYSDSLSHKLADVYFASYFLNKQRNFSNLDEFYDIGLKAMNVNKNEVLNFLNTPK
                     AKEILSEFQRANDIAKTYGTPAFVVNGKYQINPSVINSMQDLEDLVKKLSNMK"
     gene            complement(2036..3898)
                     /locus_tag="RJ266_001507"
     CDS             complement(2036..3898)
                     /locus_tag="RJ266_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004315485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
                     /protein_id="HDV7355232.1"
                     /translation="MRLSKTLCMALLAGSTLLAPNALMAMGGPSGAKIDWQIQGQIGA
                     IKMNPYGLSPLTAIIMDNGYVLSDIKVTIVPKPNGQTISYNVNSKMAKTYGGIPIFGL
                     YPSYLNTVKVSYTKTANGKSQKVIDEIYKITTPGVSIEPSGSTDQRGTPFENVKVLKM
                     DPKFSDRLYLVNNAPGKQSGKGSQSVWNNPVGGDMEWDENSNVFIIDIKGEIRWYFDN
                     DKLMNWDNIYNRGIMMGFHQNKDGALTWGFGQRYVKYDILGREIFNRKLPAAYIDFSH
                     AMDNMQNGHYLLRVASANTLRPDGKHVRTVRDTIVEVDENGNVVDDWRLYEILDPYRS
                     TIIKALDQGAVCLNIDASKAGKTLSDEELAKMDESDKFGDIAGAGIGRNWAHVNSVDY
                     DPSDDSIIISSRHQSAVVKIGRDKKIKWILGAHKGWNKEFQKYLLQPVDKNGKKIVCD
                     DDYSKCPGYENENGGFDFTWTQHTGWRIDSKSNKRYIYISVFDNGDARGAEQPAFASQ
                     KYSRAVIYKIDQQNKTVEQIWEYGKNRGNEWFSPVTSLTQYEPDKDSIVVYSATAGMA
                     FDLSKGVSLGEPKPEIDEFNWGAKEPSVQIQFSGSGTGYQAMPFSVDQAFNPKK"
     gene            complement(3998..4795)
                     /gene="dsbI"
                     /locus_tag="RJ266_001508"
     CDS             complement(3998..4795)
                     /gene="dsbI"
                     /locus_tag="RJ266_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide oxidoreductase DsbI"
                     /protein_id="HDV7355233.1"
                     /translation="MSCIKMKDKCRNFSLSKWQDTRKPWLILIIVTIGLTCIAHFLFQ
                     EYLFMEPCEQCVYIRFDMLVMAIGGMIALINPTNNIIKIFSYSLAFYGIWLGLEHCLT
                     LNHIHEVVHSENPFAGVDGCREIPIYPFNLPLHEWAPSWFLPTGECGMDTPVVPENAY
                     NHLNAFQKFFIGTLPDFENGLYSNGWYLIPNLKFMNMAICCLIAFLCCFIVLFAMFIA
                     YVLDKNKPNAKIFALVIVILVLVLKFIGEPKNPNQNIASLNHLNQVV"
     gene            complement(4792..5454)
                     /locus_tag="RJ266_001509"
     CDS             complement(4792..5454)
                     /locus_tag="RJ266_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HDV7355234.1"
                     /translation="MKFPVKLTRSIVVCAFLAGISASALSEGKEYVILKNPIANADNS
                     LIEIFSYHCTHCYDHHKINTMGKVKEKLPNLTYKFYPVSSMGDYGRQANEIFAFAAFK
                     DGVNKIDPTDKNSLTHKVAEAYFNAYFKKKQRWENGKNPEAFYSVGLKAMNVSKADLE
                     NFLKTPEAAELLKSYEIANPISQNYGTPAFVVNGKYQIIPSAINSPETLIEITKELSK
                     QK"
BASE COUNT         1891 a          945 c          787 g         1887 t
ORIGIN      
        1 aagtaaaagt atcttgcctt ccaagatttt gaaaaacgca gttgtctaag tctttttttt
       61 cttgaatgct taaatttttc attaacctaa cctttaaaaa tattgcaaga ttttattata
      121 gcgaaaaaac tttatttttg ctttaaatat ataagctcta ttttaaatat aaacgaatat
      181 tattttaagg tttaaagctt ttttcttaaa atgtaattag gttttattga ctttttctaa
      241 ataaagtctt atactgaatt taaattacgc aaaataagga gggaaattga tgaataaatt
      301 ttctatagtt ttaactttgt tgttatgtgg aagttgtgct ttagccttag atccaaattt
      361 ggaaaaaact aagagtgcaa caggtattga tctgcctact gccaaatgga atttacctaa
      421 ggaattaaat gaagatggca ctatagatga aactaaaatg ccaaaaaatt cagaatatag
      481 caaaatggtt attttgggaa ataaaattct taatgaaaca agcaagtatg tgggtccaca
      541 agccaaagat cctaaaaaaa gatttgcggg aaataatctt tcttgttcaa gctgtcatgc
      601 taatggtgga agtgtgcaaa atcaatcggg ttttgtagga atttgggcaa gatttccaca
      661 atataatgca agaggagata aagtaattac cttagcagat aggatcaatg gctgttttga
      721 acgctctatg aatggcaaaa gaatgcctag tgatacacct gaaatgaaag ccatgctaac
      781 ttatatgcaa tggttatctc aaggagttcc agtaggagct aagatagaag gacagggact
      841 taagaaaata gatttcatct caagagcagc tgatcctaaa aaaggtaagg caatttatat
      901 ggataaatgt gccgtttgtc atcaagaaaa tggcttgggg cttaaaaatg aggatagtgc
      961 agggcgtatt atctttatcc accactttgg ggtgatgata gttataacac aggagctgga
     1021 atgtatcgtc ttatcaaagc tgcttcttat attaaagaaa atatgcctca aggtgcacct
     1081 gacttaagtc ttgaagatgc ttatgatgta gcagcttaca tgaattcaca agctcgccct
     1141 attaaagcaa atagagatga agactttcca aatagaaagg ttaagccttt agatatggat
     1201 gtgggacctt atgacgatag cttttctaca acccaacatc gctatggacc ttatacaaat
     1261 atgatcaaaa aataatttta aggcaatttt tattgcctta aaaatttatt atttcatatt
     1321 acttaatttt ttaactagat cttctaaatc ttgcattgaa ttgattacgc ttgggttaat
     1381 ttgatatttt ccattaacaa caaaagcagg ggtgccatag gttttagcta tatcattagc
     1441 tctttgaaac tcgcttaaaa tttctttagc ttttggggta tttaaaaaat ttaatacttc
     1501 atttttattt acattcatag cctttaaacc tatgtcgtaa aattcatcta aatttgaaaa
     1561 atttctttgc ttgtttaaaa aataagaagc aaaataaaca tcagcaagtt tatgagataa
     1621 actatcagaa taactcgcat ctttaccatt ttgcttatct ttgtattgag caaaggcaaa
     1681 aagctcattc atttctttgg aaaattcccc attcattaaa cttacaggat agagtttaaa
     1741 atgtaaattt ggaaaagctt ctctcagttt ttcaagagtt ccaaatttat gatgattata
     1801 acaatgtata catttataag aaaatgcttc tattacacta ttttcagagt tgggtaaact
     1861 tggattaagg gtaataaaac tattatttgc taatgcaaaa cttgaataaa atacaagagc
     1921 taaaacaaat ttgcaaaaaa aattacgcat attatatcct tggttaaata aaattttcaa
     1981 agataatttt atttaaaaaa aataaataag cccaaattta tttttgggct tattgttatt
     2041 ttttaggatt gaatgcttga tcaacactaa aaggcattgc ttgataaccc gtgcctgaac
     2101 cgctaaattg aatttgaacc gaaggttcct tagcacccca gttaaattca tcaatttcag
     2161 gttttggttc cccaagactt acacctttgc taaggtcaaa agccattcca gctgttgcac
     2221 tataaaccac aatagaatct ttatctggtt catattgagt taaagaagtt acaggagaaa
     2281 accattcatt tccacgattt ttaccatatt cccaaatttg ttccacggtt ttattttgct
     2341 gatcgatttt ataaattaca gcacgagaat atttttgact tgcaaatgca ggttgttcag
     2401 ctcctcttgc atcaccatta tcaaaaacac ttatataaat ataacgcttg tttgatttac
     2461 tatcaattct ccagcctgta tgctgcgtcc aagtgaaatc aaatccacca ttttcatttt
     2521 cataacctgg gcatttgcta taatcatcat cgcaaacaat ttttttgcca tttttatcta
     2581 caggttgcaa taaatatttt tgaaattctt tattccaccc tttatgtgcc cctaaaatcc
     2641 attttatttt tttatcacga ccaattttaa caacagcact ttgatggcga ctagaaataa
     2701 taatactatc atcacttgga tcataatcaa cgctatttac atgagcccaa ttcctaccta
     2761 tacctgcacc tgctatatct ccaaatttgt cgctttcatc cattttggca agctcttcat
     2821 cgcttaaggt tttacccgct ttgcttgcat ctatatttaa acacactgca ccttgatcta
     2881 aagctttgat aatggtactt ctataaggat ctaaaatctc atacaatctc caatcatcaa
     2941 caacattacc attctcatct acttctacaa tagtatcacg cactgtgcgt acatgcttac
     3001 catctggacg caaagtattt gctgaagcta ctcttaataa ataatgccca ttttgcatat
     3061 tgtccatagc atgagaaaaa tctatatagg cagcaggtaa tttgcgattg aaaatttctc
     3121 ttcctaagat atcgtatttt acatatcttt gaccaaatcc ccaagttaaa gctccatctt
     3181 tgttttgatg aaagcccatc ataattccac gattataaat attgtcccag ttcattagtt
     3241 tatcgttatc aaaataccat ctgatttcac ccttgatatc tatgataaag acatttgaat
     3301 tttcatccca ttccatatca ccacctacag gattattcca tacagattgt gagcctttgc
     3361 cagactgttt tccaggagca ttatttacta aatatagcct atctgaaaat tttggatcca
     3421 tttttaatac tttcacattt tcaaaaggag ttcctctttg atcagtactt ccacttggtt
     3481 ctatgctaac ccctggagtt gtaattttat aaatctcatc aatgactttt tgacttttac
     3541 catttgcagt tttagtataa cttaccttta ctgtatttaa ataagaagga taaagtccaa
     3601 aaataggaat tccaccataa gtcttagcca ttttagaatt cacattataa gagatagttt
     3661 ggccatttgg tttaggaaca atggttactt ttatatcact taaaacatag ccattatcca
     3721 tgataatagc ggtcaaagga gacaatccat aaggattcat tttaatcgca cctatttgcc
     3781 cttgaatttg ccaatctatc ttcgctccac taggaccacc catggccatt aaagcattag
     3841 gtgcaagtag ggtagaaccc gccaaaagtg ccatgcaaag agttttgcta agtctcatga
     3901 tcaatccttt aaaattattt aagccatcct aagatagctt aataaaattt taataataca
     3961 caacaaaaat aatttgttgt gtattttaag agtatcttta aacaacttga tttaaatggt
     4021 ttaaactagc tatattttga tttggatttt ttggttcgcc tataaattta agcactaaaa
     4081 ccaaaataac aatcaccaat gcaaaaattt tagcattagg tttattttta tctaaaacat
     4141 aggctataaa cattgcaaaa agcacaataa aacaacataa aaatgctata agacagcaaa
     4201 ttgccatatt cataaacttt aaattaggaa tcaaatacca accattgcta taaagcccat
     4261 tttcaaaatc aggtagagtt cctataaaaa atttttgaaa agcattgaga tgattataag
     4321 cattttctgg aactacaggg gtatccatcc cacattctcc tgttggtaaa aaccaactag
     4381 gagcccattc atgcaaaggt aaattaaatg gatagatagg aatttcacga catccatcta
     4441 cacctgcaaa aggattttca gaatgaacca cttcatgaat atgatttaaa gttagacaat
     4501 gctccaagcc aagccaaatt ccataaaaag ctaagctata agaaaaaatt tttataatat
     4561 tatttgtagg gttgattaat gcaatcatac cacctatagc cataacaagc atatcaaatc
     4621 ttatatacac acattgttcg caaggttcca taaaaagata ttcttgaaat aaaaaatgtg
     4681 ctatacaagt aagtcctata gtaactataa tcaaaatcaa ccaaggttta cgcgtatctt
     4741 gccatttaga aagtgaaaaa tttctgcatt tatctttcat ttttatacaa ctcatttttg
     4801 cttgctaagt tctttagtaa tttcaatcaa agtctctgga gagttgattg cacttggaat
     4861 gatttgatat tttccattaa caacaaaagc aggggtgcca taattttgcg aaataggatt
     4921 ggcaatttca taacttttta aaagctctgc agcctctgga gtttttaaga aattttccaa
     4981 atcagcttta cttacattca ttgcttttaa accgacacta taaaaagctt caggattttt
     5041 accattttcc catctttgtt ttttcttaaa atatgcatta aaataagctt cagcgacttt
     5101 atgagttaaa ctatttttat ccgtaggatc aattttattt acaccatcct taaatgccgc
     5161 aaaagcaaaa atttcattag cttgccttcc ataatctccc atagaactta caggataaaa
     5221 tttataagtt aaattaggta atttttcttt aactttaccc atggtattaa ttttgtgatg
     5281 atcataacaa tgagtacagt gataagaaaa aatttcaatc aatgaattat cagcgttagc
     5341 aataggattt ttaagaatta catattcttt accttcactt aatgcgctag cacttatacc
     5401 tgctaaaaaa gcacatacaa caatagatct tgttaatttt actggaaatt tcattaccct
     5461 ctccttgaaa tttggttttg ataaaacttt ttattaagtt tttatgtaat
//
LOCUS       DAPIWB010000082         5482 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.083, whole genome shotgun sequence.
ACCESSION   DAPIWB010000082 DAPIWB010000000
VERSION     DAPIWB010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5482)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5482)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5482
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.083"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(12..773)
                     /locus_tag="RJ266_001510"
     CDS             complement(12..773)
                     /locus_tag="RJ266_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HDV7355235.1"
                     /translation="MRINKFISHNTRYSRREADELIKQGLVKINNKIALLSDEVKFDD
                     KVFVKGKRVQKRTQFSVIIYHKQKGEIVSKKDDRGRKTIYDTLPRQFSTWLSVGRLDY
                     ASEGLLLLTDSPVIADALMHSDLEREYYLKVKGTVSKQVIEAMQNGLEIKNEKKGAHA
                     KTKITSMSFAPFIDFEIFGSSGGYTKLRVVINEGKNRELRRFFGHFDLEVMDLKRVAF
                     GALDLGMLKAGKHRYLENGEYEKLRDFLKFNEIRY"
     gene            complement(809..2803)
                     /locus_tag="RJ266_001511"
     CDS             complement(809..2803)
                     /locus_tag="RJ266_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HDV7355236.1"
                     /translation="MNMDENKEINKNEQNPNSNSKNNKRYKYKNRRKKLADSLQNEND
                     TPKIDQNSNKEISENSENKTEKKKKKNRNLPSKLTGNEDWQIALAECIEANRVSHENR
                     LHPLKYNNSSEHKIRITPLGGLGEIGGNISVFETNKDAIIVDIGMSFPDGTMHGVDII
                     IPDFDYVRKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEH
                     GLKAERKWFRPVEKRKVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKID
                     QTPIDGYPTDLGRLAYYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFARTKGR
                     VIMSTFSSNIHRVYQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDAD
                     EVSKYKDNEVLIVTTGSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASV
                     SAVLDYLLKAGAKVAYQEFSEIHVSGHASIEEQKLMLTLTKPKFFLPVHGEYNHITKH
                     KETAMKCGIPERNIYLMSDGDQVELCQKYVKRIKTVKTGKVFVDNQINKQIADDVVID
                     RQKLADSGIVVIIAQIDKATKTLINKPRVFSYGLVADKHDHAFSKDMAEVLGQFFINV
                     KDEVLNDPRFLENQIRQVLRKHIFRKIKKYPTIVPTIFVM"
     gene            complement(2772..3572)
                     /gene="rsmA"
                     /locus_tag="RJ266_001512"
     CDS             complement(2772..3572)
                     /gene="rsmA"
                     /locus_tag="RJ266_001512"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HDV7355237.1"
                     /translation="MVKAKKQYGQNFLIDKSVLAKIIQAIPKEMNNIIEIGPGLGDLT
                     QELLKISQVKAYEIDNDLIPILKKKFQKELECGKFNLIHQDASEAFNPSLDEKPYFLV
                     ANLPYYVASHIILKALEDKNCLGLIVMAQREMAEKFCAKEGNSEFSSLGVLSAMICER
                     KILFDVDPQCFNPPPKVMSAVMSLIKTKDFDELCEIENFKNFLKDCFKAPRKQLLGNL
                     KTYKAKVLEVLSTLGLKENIRPHEICVDLYLKIYDKLKDEYGRKQRDK"
     gene            3652..4188
                     /locus_tag="RJ266_001513"
     CDS             3652..4188
                     /locus_tag="RJ266_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDV7355238.1"
                     /translation="MIVCAGGNENFSFAKAIGIGLVESAFHLSQLCFKEKPSKLIFIG
                     TCGLYDKGEILEIYRSSHAFNVEFSKISHAFYTPAKYEICLEKENVSRETIKINSSNY
                     ICQNSKAAKEFSKLGFFAENMEAFSVLSVAKNLNIDAECILCATNFCNENAHEDFIKN
                     HQKAKENLEEYLKKYHYI"
     gene            4211..5281
                     /gene="rlmN"
                     /locus_tag="RJ266_001514"
     CDS             4211..5281
                     /gene="rlmN"
                     /locus_tag="RJ266_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HDV7355239.1"
                     /translation="MKELVNILDFLPEELGEKIKPMFRVKQIYQWIYQKYANNFSDMS
                     SLPKDLRLELAQNFHFSPVKCVKNEQSKDGSIKYLFELIDGLRVESVLLPMKEEKIDA
                     EGKRISHARYTICVSSQVGCKSGCSFCLTAKGGLKRNLSAGEIVGQILWIKKQNNIPY
                     ERRVNIVYMGMGEPLDNLKNVSKAVKILAQNEGLAISPRRQTISTSGLAKQIKELGQM
                     NLGVLLAISLHAVNDELRTELMPINKAYNIAAIMDAVREFPIDQRKRVMFEYLLIDGI
                     NDKLEHAKELVKLLNGIKAKVNLILFNPHEGSLYKRPSLENAIKFQDLLSNKGVTCTI
                     RESKGLDISAACGQLKERAKEQ"
     gene            5278..5376
                     /locus_tag="RJ266_001515"
     CDS             5278..5376
                     /locus_tag="RJ266_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355240.1"
                     /translation="MTMLDIFEIIFITTVVIIGFGGIVFVVTKEKK"
     gene            complement(5390..5466)
                     /locus_tag="RJ266_001516"
     tRNA            complement(5390..5466)
                     /locus_tag="RJ266_001516"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5430..5432),aa:Met,seq:cat)
BASE COUNT         1729 a          888 c          880 g         1985 t
ORIGIN      
        1 atatataatg gtcaatatct tatttcatta aattttaaaa aatctcttaa tttttcatat
       61 tcgccatttt ctaaataacg atgttttccc gccttcaaca taccaagatc taaagcccca
      121 aaagcaacac gcttaagatc catgacttca agatcaaaat gtccaaaaaa gcgtctaagc
      181 tctctatttt taccttcatt tataaccact ctaagcttag tataacctcc acttgatcca
      241 aaaatttcaa agtctataaa aggagcaaaa ctcatagagg taattttagt ttttgcatgt
      301 gcgccttttt tttcgttttt aatctcaagt ccattttgca tcgcttcaat gacttgtttg
      361 ctcaccgtac ctttaacttt aaggtagtat tctctttcta aatcgctatg cattaaagca
      421 tcggcaatca caggagaatc tgtaagcaaa agcaagccct cgcttgcata atctagtctg
      481 cctacactaa gccaagtact aaattgtctt ggcaaggtat catatatagt ttttcttcca
      541 cgatcgtctt ttttactgac aatttcgcct ttttgtttat ggtagattat cacgctaaat
      601 tgcgttcttt tttgcactct tttaccttta acaaagactt tatcatcaaa tttaacttca
      661 tcgcttaaaa gggcgatttt gttgtttatt tttactaagc cttgtttgat aagttcatca
      721 gcttcacggc gtgaataacg ggtgttatgg gatataaatt tattaattct catttgatct
      781 tccttaaaaa gggcattttt gccctttttt acattacaaa aatagttgga actatggttg
      841 ggtatttttt aatctttcta aagatgtgtt ttcttaaaac ttggcggatt tgattttcta
      901 aaaatcttgg atcattgagt acttcatctt taacattgat gaaaaattgt cctaaaactt
      961 cagccatatc tttgctaaaa gcatgatcgt gtttgtcagc tactagccca tagctaaata
     1021 ctcttggttt gttgatcagt gtttttgtag ctttgtcaat ttgtgcgata ataactacta
     1081 taccactatc tgcaagtttt tggcgatcta taactacatc atcggcgatt tgtttgttga
     1141 tttgattatc tacaaaaact ttacctgttt ttacggtttt tatgcgtttg acatattttt
     1201 ggcaaagttc tacttgatcg ccatcactca taagataaat atttctttca gggataccgc
     1261 acttcatcgc tgtttctttg tgtttggtga tgtgattgta ttctccatga actggtagga
     1321 aaaatttagg cttagtaagg gttagcataa gcttttgctc ttctatacta gcgtgtccgc
     1381 ttacatgaat ttcactaaat tcttgatacg ctactttagc tcctgctttt aaaagatagt
     1441 caagcaccgc agaaacactt gcttcatttc ctggtatggc tttagctgaa ataatcactt
     1501 gatctgtagg tttgattttt ataaatttat gctcatcagt tgccattcta taaagcgcac
     1561 tcatagtttc gccttgactt cctgtagtta cgataagcac ttcattgtct ttatatttgc
     1621 ttacttcatc agcatcgatg aaaatttttc tatcaagttt aatatagcct aattccatag
     1681 tagtataaag atttctttcc atagaacgac caataacaca aacttttctg ccgtatttta
     1741 aaccataagt gatagcctga taaacacggt ggatattaga actaaaagta ctcataatca
     1801 ccctaccctt agtacgcgca aaaatttgat caaaagttgg ccctacagag ctttcacttt
     1861 ttgtataacc ttctttataa gaatttgtac tatcacttaa aagacataaa accccttctt
     1921 ctccataata cgctaaacgt cctaagtctg ttggatagcc atcgattgga gtttgatcga
     1981 ttttaaaatc acctgtgtgg ataatcgttc ctgcttttgt tttgatcgca agtgctgaag
     2041 catcaatgat agaatgcgtg atgtggatcc actctatatc aaattcacct atttcataaa
     2101 ctttgcgttt ttctacagga cgaaaccatt tgcgttctgc ttttaagcca tgttcttcaa
     2161 atttgtttga aatcattcct aaagccaaag gtgtagcgta gataggaaat tgaaattctt
     2221 taaagaaata aggcaccgca ccgatatgat cttcgtgtgc atgagtgatc actataccac
     2281 gaattttatc tttaattttt cttacatagt caaaatcagg gatgataata tctaccccat
     2341 gcatagttcc atcaggaaaa ctcataccta tatctactat aattgcgtct ttattggttt
     2401 caaaaacact gatatttcca ccaatttctc ctaagccccc taaaggagtg atgcggattt
     2461 tatgttcgct agaattgtta tattttaaag ggtgtaagcg gttttcatgt gaaacacggt
     2521 tagcttctat acattctgca agagcgattt gccaatcttc attacctgtg agttttgaag
     2581 gaagattgcg attttttttc ttttttttct cagttttatt ttctgagttt tcagaaattt
     2641 ccttgttgga attttgatcg atttttggag tatcattttc attttgcaaa gaatcagcta
     2701 atttttttct acgattttta tatttatagc gtttattgtt ttttgaattt gagttcggat
     2761 tttgttcgtt tttatttatc tctttgtttt cgtccatatt catcctttaa tttgtcataa
     2821 attttaaggt ataaatcaac gcaaatttca tgtggtctga tgttttcttt taagccaaga
     2881 gtgcttaaaa cttctaaaac ttttgcttta tatgttttta aatttcctaa gagttgtttt
     2941 ctaggagctt taaaacaatc ttttagaaaa tttttgaaat tttctatttc gcaaagttca
     3001 tcaaaatcct tagttttaat caaactcatc accgctgaca taacttttgg tggaggatta
     3061 aaacattgcg gatcaacatc aaaaagtatt tttctttcgc aaatcattgc acttaaaaca
     3121 cctaaggaag aaaactcact atttccttct ttagcgcaga atttttcagc catttccctt
     3181 tgtgccatta caataagccc tagacaattt ttatcttcta aagcttttaa tataatgtga
     3241 cttgcaacat aataaggcaa atttgcaacc aaaaaatatg gtttttcatc aagactagga
     3301 ttaaaagctt cgcttgcgtc ttgatggatc aagttaaatt ttccacattc aagttctttt
     3361 tgaaatttct tttttaaaat aggtatgaga tcattatcga tttcataagc ttttacttga
     3421 gaaattttta aaagttcttg cgttaaatca cctaagccag gcccaatctc aatgatattg
     3481 ttcatctctt tgggtatggc ttggatgatt tttgctaata cgcttttatc gattaaaaaa
     3541 ttttgtccgt attgtttttt tgctttaacc ataagaaata attttatcta aaaattctta
     3601 attaagtctt tttaggtaga attatttttt gtaaaattta taaggatcaa aatgattgtt
     3661 tgtgcgggtg gaaatgaaaa tttttctttt gcaaaagcta taggcatagg tttggttgaa
     3721 tcagcttttc atttgagtca actttgcttc aaagaaaaac catcaaaact tatatttata
     3781 ggaacttgtg ggctttatga taagggagag attttagaaa tttatagaag ttcgcacgct
     3841 tttaatgtag aattttctaa aatttcacat gcattttata ctcctgcaaa atatgaaatt
     3901 tgcttagaaa aagaaaatgt ttctcgtgaa acaataaaaa tcaattcttc aaattatatt
     3961 tgtcaaaatt caaaagcggc aaaagaattt tcaaaattag gtttttttgc agaaaatatg
     4021 gaagcctttt ctgttttgag cgtagctaaa aatttaaata ttgatgcaga gtgtattttg
     4081 tgtgcaacaa atttttgtaa tgaaaacgct cacgaagatt ttataaaaaa tcatcaaaag
     4141 gcaaaagaaa acttagaaga atacttaaaa aaatatcatt atatttaaaa attcaaaaag
     4201 gaaaataatt ttgaaagagc ttgttaatat tttagatttt ttacctgaag aattaggaga
     4261 aaaaatcaaa ccgatgtttc gcgtgaaaca aatttatcaa tggatttatc aaaaatatgc
     4321 caataatttt tccgatatgt caagtttgcc aaaagatttg cgtttagaac ttgcgcaaaa
     4381 ttttcatttt tctcctgtaa aatgcgttaa aaatgagcaa agtaaagatg gaagtataaa
     4441 atatcttttt gaacttatcg atggtttaag ggtagaaagt gtgcttttgc ctatgaaaga
     4501 agaaaaaata gacgcagaag gcaaaagaat ttctcatgcg agatatacta tctgtgtttc
     4561 ttctcaagta ggttgtaaaa gtggatgtag tttttgtctt actgccaagg gtggtttgaa
     4621 aagaaattta agtgcaggtg agatagtcgg acaaatttta tggatcaaaa aacaaaacaa
     4681 tatcccttat gaacgccgtg taaatatagt atatatgggt atgggcgagc ctttggataa
     4741 tcttaaaaat gtttctaaag cggtaaaaat tttagcgcaa aatgagggac ttgctataag
     4801 tcctcgccgt caaaccatca gtactagcgg tttggcaaaa caaatcaaag aattaggtca
     4861 aatgaattta ggtgttttac ttgctatatc attgcatgcg gttaatgatg agcttcgaac
     4921 cgaacttatg cctatcaata aagcttataa tatcgctgcg attatggatg cggtgcgtga
     4981 atttcctata gatcaaagaa aaagagtgat gtttgaatat cttttaattg atggtatcaa
     5041 tgataagctt gaacacgcta aagaattagt caagctttta aatggcatta aagccaaagt
     5101 gaatttaata ctctttaatc cacatgaagg aagtttatat aaacgcccta gtttagaaaa
     5161 tgcgattaaa ttccaagatt tactaagtaa taaaggtgta acttgtacta taagagaaag
     5221 taaaggactt gatatctcag ctgcttgcgg acagcttaaa gaaagggcaa aagaacaatg
     5281 acgatgttag atattttcga aatcattttt ataacaactg ttgtaattat aggttttggt
     5341 ggaattgttt ttgtagtaac aaaagaaaaa aaataattat tacatttaat ggtgtcaagg
     5401 gggagacttg aactcccgac ctccggctta tgagaccagc gctctaacca gctgagctac
     5461 cctgactaaa aataaaaata ta
//
LOCUS       DAPIWB010000083         5453 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.084, whole genome shotgun sequence.
ACCESSION   DAPIWB010000083 DAPIWB010000000
VERSION     DAPIWB010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5453)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5453)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5453
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.084"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(368..1075)
                     /locus_tag="RJ266_001517"
     CDS             complement(368..1075)
                     /locus_tag="RJ266_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002894535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355241.1"
                     /translation="MSNLNFHQMFEIRRQNDFKSVKKFAWIVFISFLLSICFYFLPIV
                     LDFIYDLKLYNFDSIANILTIIFCVIFLISYSIMILKLYFTSKSKVLLISFFIAASTQ
                     FIALFNLILIMSAYPLSQTRIALYSFSFLCLIVAIFCTFIFFKTLRALCENQIYFLLC
                     FIFKSMILIIVFIFMLFLIHSKPSLALAITLFMFFFFTGLLFVIYYALFAFALSKNQN
                     IKFIPNLKLLSNEKENI"
     gene            complement(1095..1646)
                     /locus_tag="RJ266_001518"
     CDS             complement(1095..1646)
                     /locus_tag="RJ266_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355242.1"
                     /translation="MTHEQKIAFFKIKRLSVYIFFCALYNFYYFFSYEGVTSSYEAGN
                     EILYIGGIFLCFFSCIYIVLAFIFMVIRIHFLFSSNKILIYFLLAIINLGASFFLLEN
                     KILFLGLLALFFVFYFLFSLTLALLFKEVKMSFLFAFLCMLLAFLSFIFIYKLSLLFL
                     FLTLHFLSFAYAFERYKILKKLD"
     gene            complement(1648..4470)
                     /gene="uvrA"
                     /locus_tag="RJ266_001519"
     CDS             complement(1648..4470)
                     /gene="uvrA"
                     /locus_tag="RJ266_001519"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HDV7355243.1"
                     /translation="MNDTIKIIGARENNLKNIHLEIPKNKLIVFTGLSGSGKSTLAFG
                     TLYAEGQRRYIESLSAYARQFLDKVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTI
                     TEIYDYLRLLYARVGIQHCHQCGQKISSMSASDIVSEILKFPKGAKIIIYAPLIREKK
                     GTYADLLENLRNKGYVRAQIDGVLVRLDEEIELAKTKKHTIKLVIDRLEIQEDLLSRL
                     ASDIEKGLQESFGEIEIEVLNHEEINLNKHYHFSEHSACFDCKISFVPLEPLSFSFNS
                     PKGACEACDGLGIRYTLDMKKIIDENLSLENGAVKIMYGFNKSYYYKFLIAFCEQNEI
                     PIKIPFMQLNEEQKRLVLYGNAKTIEFLWKRNRLKRTFEGVVKMAYEMLKDEKDLAEY
                     MSEKICKDCGGHRLKPESLAVKVAKKSLGEILDMSIEDSTAFFADEKNFSYLSEQQKL
                     ISKPILKEINERLFFLYDVGLGYLSLGRDARTISGGEAQRIRIASQIGSGLSGVMYVL
                     DEPSIGLHERDTAKLIKTLRNLQQKGNTLIVVEHDKMTIEEADFIVDIGPKAGKFGGE
                     VVFSGTYKELLKSKSETALYMNGKKQISQLQNRTQKEWLELKNVNINNIQDLSVKFPL
                     QNLVAITGVSGSGKSSLILQTLLPFAQEELNRAKKVKKLGGVQIEGLEKLDKVIYLDQ
                     SPIGRTPRSNPATYTGAMDEIRNLFAATKEAKMRGYKAGRFSFNVKGGRCEKCSGDGE
                     IKIEMHFLPDVMVVCDTCEGKRYNDATLEIKYKGKNISEILNMSVLEASEFFTAVPKI
                     KQKLDTLVKVGLDYLTLGQNATTLSGGEAQRIKLAKELSRSDTGKTLYILDEPTTGLH
                     FEDVNKLILVLQHLVDLKNSVFVIEHNLDVIKNADYIIDMGPEGGVKGGKVISTGSVE
                     KVAKEHKKTKSYTGYYLDLELKNARS"
     gene            complement(4543..5328)
                     /locus_tag="RJ266_001520"
     CDS             complement(4543..5328)
                     /locus_tag="RJ266_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDV7355244.1"
                     /translation="MEITDLPYLIIGIISGIASGLFGIGGGMIIVPSMFALGASAHHA
                     IGISVLQMIFAAVFGSYINYKKKNLNLKDGIMIGFGGLIGASFSGMLLKALSDVALTS
                     VFLAVSCIFFIKYAFGIKENIVQNQRSVWVKNVILFIAGAFTGIFAISLGIGGGLLIA
                     PILAYFLGYDSKKVVSLSLFFVIFASVSGIISFSNSGVIDSEVIHKGILVGIASMVGV
                     FIGIKIIEKMHISAHRKILLCVYALSILGTTHSLLNKLNLINF"
BASE COUNT         1994 a          890 c          742 g         1827 t
ORIGIN      
        1 agctaaataa atgaaaaatt gccataagtt agcgttttct agatgaaaat acatatcaat
       61 acaacaaaca aacattatat aaataaaaca aaaagccaaa ggaaatatca atttttcttt
      121 tctaaaaata aaaaaataaa ataaatgtat aaaacaaaat aaaattagca gtaaaaaagt
      181 taaaatagaa tttaaaaaac gcaaattttc tcttagatga taaagctttt gatcggctaa
      241 atttagcatt tgaaggtttt gcggtggtaa ttcataaagg ctataatcaa tggttaaata
      301 gtgattaaaa acaaaaacta aggtgatttg acttaggctt aaaaagataa caaataaaat
      361 actatagtta aatattttct ttttcattgg ataaaagctt taaatttggg ataaatttga
      421 tattttggtt tttactaagt gcgaaagcaa atagggcgta ataaatgaca aacaataagc
      481 ctgtaaagaa aaaaaacata aacaaagtta tggctaaagc aagtgaaggc ttgctatgaa
      541 ttaaaaaaag cataaatata aaaacaatta tcaaaatcat acttttaaaa ataaaacata
      601 agagaaaata aatttgattt tcacataaag ctcttagtgt tttaaaaaat ataaaagtac
      661 aaaaaatggc tactataaga cataaaaaag aaaagctata tagagcaata cgcgtctgac
      721 tgagaggata agcactcata ataagaatta agttaaacaa agcgataaat tgagtgcttg
      781 cagctataaa aaaacttatc aacaaaactt tacttttact tgtaaaataa agttttaaaa
      841 tcataattga ataagaaatt aaaaaaatca cacaaaaaat tatagttaaa atgttagcga
      901 tagaatcaaa attatacaat tttaaatcat agataaaatc aagaacgata ggtaaaaaat
      961 aaaaacaaat tgaaagtaaa aaacttataa aaactatcca agcaaacttt ttaacgcttt
     1021 taaaatcatt ttgtcttcga atttcaaaca tttgatgaaa gtttaaattt gacacttttc
     1081 ttctttaaaa tatttcaatc tagctttttt aaaattttat acctttcaaa ggcataagca
     1141 aaactcaaaa aatgcaaagt aaggaaaaga aataaaaggc ttaatttata gataaatata
     1201 aaagataaaa atgccaaaag catgcacaaa aatgcaaata aaaaagacat tttcacttct
     1261 ttaaaaagca aagcaagggt aagtgaaaat aaaaaataaa aaacgaaaaa taaagctaaa
     1321 agccctaaaa ataaaatttt attttccaaa agaaaaaaag atgcaccaag gtttataatg
     1381 gcaagcaaaa aataaattaa aatcttatta gaagaaaata aaaaatgaat tctgatcacc
     1441 ataaaaataa aagcaagaac tatgtaaata caagaaaaga agcataaaaa tataccgcca
     1501 atataaagaa tttcgttccc agcttcatat gaactcgtca ccccttcata agaaaaaaag
     1561 taataaaaat tatataaagc acagaaaaat atataaacac ttaatctttt aatcttaaaa
     1621 aatgcaattt tttgttcgtg tgtcatttca actccttgcg tttttaagct ctagatctaa
     1681 ataatatcct gtataggatt ttgttttctt atgctcttta gcgacttttt ccacgcttcc
     1741 tgtgcttata acttttccac ctttaactcc gccttcaggc cccatatcga tgatataatc
     1801 agcattttta atcacatcta aattatgttc tatcacaaaa acagaatttt taagatcaac
     1861 caaatgttgt aaaactaaga tgagtttatt gacatcttca aaatgcagtc ctgttgtagg
     1921 ttcatcaagt atataaagcg tttttcctgt atcgctacgg cttagttctt tagcaagttt
     1981 gattctttgt gcttcacctc cacttaaggt ggtggcattt tgtcctagag ttagataatc
     2041 taaacccact tttactagag tatctaattt ttgtttgatt ttaggaacgg ctgtaaaaaa
     2101 ttcactcgct tctaaaacac tcatatttaa aatttcactg atatttttgc ctttatattt
     2161 gatttctagc gtggcatcat tgtagcgttt gccctcgcaa gtatcacaaa ctaccataac
     2221 atcaggtaaa aaatgcattt ctattttgat ttctccatct ccgctacatt tctcacatct
     2281 tccacccttg acattaaaag aaaagcgtcc agctttataa ccacgcattt tggcttcttt
     2341 agtggcggca aaaagatttc tgatttcatc catagcacct gtataggtgg caggatttga
     2401 acgtggtgtg cgcccaattg ggctttgatc aagataaatg actttatcaa gtttttcaag
     2461 tccttctatt tgtactccgc caagtttttt aacttttttc gcacggttta attcctcttg
     2521 tgcaaaagga agtagggttt gaagtatcaa agagcttttt ccagaacctg aaactcctgt
     2581 tatagcgact aaattttgca aaggaaattt tacgcttaaa tcttggatat tgttaatatt
     2641 tacattttta agctcaagcc attctttctg tgttctgttt tgaagttgtg aaatttgttt
     2701 tttaccattc atataaagtg cagtttcgct tttgcttttt aaaagttctt tataagttcc
     2761 actaaataca acctcacccc caaattttcc tgcttttgga ccaatatcta caataaaatc
     2821 tgcttcttct atggtcattt tatcatgctc tacgacaatt agggtattgc ccttttgttg
     2881 taaatttctt aaagttttaa tcagttttgc agtatctctt tcatgaagtc ctatgctagg
     2941 ctcatctaag acatacatca ctccgcttaa accactgcca atttgtgaag ctatgcggat
     3001 tctttgtgct tcacccccac taatcgttct tgcatcgcgc cctaaagaaa gataacctag
     3061 ccccacatca tacaagaaaa acaatctttc gttgatttct tttaggatag gtttagaaat
     3121 aagtttttgt tgctcgctta aataagaaaa atttttctca tctgcaaaaa aagccgtact
     3181 atcttctatg ctcatatcta aaatttcacc caagcttttt ttggctactt tcacggctaa
     3241 actttcgggt tttaaacgat gcccaccgca gtctttacaa attttttcac tcatatattc
     3301 agctaaatct ttttcatctt ttagcatttc ataagccatt ttaaccacgc cttcaaaagt
     3361 gcgttttagg cgatttcttt tccaaagaaa ttctatagtt ttggcattac catacaatac
     3421 aagacgtttt tgttcttcgt ttaattgcat aaaaggtatt ttgataggaa tttcattttg
     3481 ttcgcaaaag gcgattagga atttataata ataactttta ttaaaaccat acatgatttt
     3541 aacagcaccg ttttcgagac ttaaattttc atcgatgatt tttttcatat ctaaagtata
     3601 acgaattcca agtccatcgc aagcttcaca tgctcctttt ggagaattaa aagaaaagct
     3661 taaaggctcg agtggaacaa aggaaatttt acaatcaaaa caagctgaat gctcgctaaa
     3721 atgatagtgt ttattaaggt ttatttcttc atgatttaaa acttctattt ctatttctcc
     3781 aaagctttct tgtaaacctt tttctatatc gcttgcaagg cgagaaagta aatcttcttg
     3841 aatttcaagt ctatctatga caagtttaat ggtgtgtttt ttggttttag ccagttcaat
     3901 ttcttcatca agtcttacta aaactccatc gatttgagct cttacatagc ctttgttgcg
     3961 taaattttca agtaaatctg cataagttcc ttttttttct cgtatgagtg gagcgtagat
     4021 gatgattttt gcaccttttg gaaattttaa aatttcactg actatatcac ttgcactcat
     4081 agatgagatt ttttgtccac attgatgaca atgttgaata cctactcttg catataaaag
     4141 tcttagataa tcataaattt cagtgatggt tcctacggta gagcgtgggt ttttagaagt
     4201 ggttttttga tctatagcaa tggctggggt taaaccttcg attttatcaa catcaggttt
     4261 gcctacctta tctaaaaatt gtctagcata agcgcttaaa ctttctatat aacggcgttg
     4321 tccttcagca taaagagttc caaaagcaag ggttgatttt ccactcccac tcagtcctgt
     4381 aaaaacaatg agtttgtttt tgggaatttc aaggtggata ttttttaggt tattttctct
     4441 tgcaccaatg atttttatgg tatcgttcat agtctttcct aaacattaaa taaatttaag
     4501 attttagcat aataatatta aaagaacttg gataaatcca agttaaaaat ttataagatt
     4561 tagcttatta agtaaagagt gggtggttcc aagtattgat aaggcatata cgcaaagtaa
     4621 aatttttcta tgagctgaaa tatgcatttt ttctatgatt ttaattccta taaaaactcc
     4681 aaccatagaa gctataccta ctagtattcc tttatgaata acttcagagt ctataactcc
     4741 agaatttgaa aaagatataa taccagagac tgaagcaaaa ataacaaaaa acaaggataa
     4801 agaaacaact tttttactat catagcctaa aaaataagct aaaatcggag caattaaaag
     4861 tccaccacca attcccaaag aaatagcaaa aataccagta aaagctccag caataaataa
     4921 aatgacattc tttacccaaa cgcttctttg attttgcaca atgttttctt taattccaaa
     4981 agcatatttg ataaaaaata tacaacttac cgccaaaaat acgctagtaa gagctacatc
     5041 acttaaagct tttaaaagca ttccgctaaa gcttgcccct atgagtcctc caaaacctat
     5101 cataatacca tctttaagat ttagattttt tttcttataa ttaatataag agccaaaaac
     5161 tgctgcaaaa atcatttgca atactgaaat tccgatagca tggtgagcac ttgctccaag
     5221 tgcaaacata gaaggaacga taatcatacc tccaccaatg ccaaaaagtc cagaagcaat
     5281 acctgaaatg attcctatga ttagataagg taaatctgtg atttccatag cttttcctaa
     5341 aaaatattaa atatttcaaa tacggaataa ttttatctta ttaagctaag tattatctta
     5401 gttttttata acaatagaat attttttggt aactttaagc atcgtaaaaa tgt
//
LOCUS       DAPIWB010000084         5446 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.085, whole genome shotgun sequence.
ACCESSION   DAPIWB010000084 DAPIWB010000000
VERSION     DAPIWB010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5446)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5446)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5446
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.085"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..906
                     /locus_tag="RJ266_001521"
     CDS             <1..906
                     /locus_tag="RJ266_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002792331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355245.1"
                     /translation="IVSGRKMLDFTLWSDCVLLQVYRNTSNHHTNFLKILNFTILMIS
                     LYAFMGFVFSKTINFILSFNSVSIIIASYIILLVFALMLVNVKKQLYQYGVILIFMLC
                     GAFTISMILFLSSEYISIFCFLIYFLGVLIFYLFFICKIKLFIFLVRFFAYMIFIATI
                     ITKPQFINPFTGVFSSDKLYESQFEKSLNDLNASAIVNLASILQNDFNLHLKDQNISF
                     TELNSAKALIIANKENLLKLNDANLNITKEVLGEKYTELLKIINQDKITENTIKSTSV
                     LYSIILLLCIFSLQKTARKNSIVPS"
     gene            complement(936..1637)
                     /locus_tag="RJ266_001522"
     CDS             complement(936..1637)
                     /locus_tag="RJ266_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HDV7355246.1"
                     /translation="MKTNNIFMALAIVLASLILAFGFNKALSDFKTLERSVSVKGLSQ
                     KEVEADTLILPIKFTRSNNNLTNLYEELEQDKENIIKFLEKQGIKEDEISYNSPNIID
                     RLSDPYGNDTQATYRYIGTANLLIYTQNVKLGKSILENISSLAKFGIVTKIDDYDIEY
                     LYTKLNEIKPQMIEEATLNARNAAIKFAQDSNSHLGKIKKASQGQFSISNRDKNTPYI
                     KTIRVVSTIEYYLKD"
     gene            complement(1634..2836)
                     /locus_tag="RJ266_001523"
     CDS             complement(1634..2836)
                     /locus_tag="RJ266_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HDV7355247.1"
                     /translation="MQKYTKIHGFAKFKLIVILALMSSIAPLSTDMYLPALSHVEQSF
                     QTNSFLTQLSIASFFIAFALGQLIYGPLSDIFGRKIPALVGIFFFIISSLFCVIIDDI
                     YAFIALRFFEALGGCAGVVIARAIVNDLFEIKEAAGIFALMMVFSSLAPMLSPTFGGI
                     LLEYFSWHSIFATLFALGILLFLMILFGLKESAPHLKNKKFSHHEAMKSYKFVLSDKH
                     FLVYILCASFALAAMFAYITGSSFVFTQFFSLSEQKFALLFGANALGFVICANINARL
                     VLKYESEKILAKALMIMFISTVILLVNAFFHPNFLLFELSIFTSIAMLGFIAPNTTTL
                     AMARFKEHSGTASAVLGTMQFGFAGFISFIVGAIDANTPIILAFVMCACVLVANMIYF
                     LIKIKEKK"
     gene            2940..4289
                     /locus_tag="RJ266_001524"
     CDS             2940..4289
                     /locus_tag="RJ266_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2130 domain-containing protein"
                     /protein_id="HDV7355248.1"
                     /translation="MLNLNQNEQIKCPSCGSFIDISTALYTQILDKAKQEMLKQKKEF
                     DDEVNAKRAEYIKALNDLKTQKIEQEKLINEQVSQKLLLEKQKFEQELLIQKQNFQKE
                     FSEKFNKEHENEMKIMQEELEKKSKELSEFLSIKAENERLKREQKENEERLKFQAKEE
                     AFKEFKEQESKNLEFEREKMRLEFQKSTQEQDLKYKELETNFKSVAQKLEDAQRRIEQ
                     GSQQLQGEAAELLIEEYIQSEYLSDEVKEVPKGVNGADCLHIVKDNFGNICGSILYES
                     KRTKEFNKEWLDKLKLDSIAAKSDIAVLITKTMPKDKEKTHFKEGILICTFNEFKGVL
                     AVLRESIINAYKLKNALQNKDEKNHILYEYLNSKEFNTQITFILKTYQNMKEELEAEK
                     RALQNIWKKRERAIENLSFNSTAIVSSLNAIFSDLQGGNLIGEEGIKSLENLAKDED"
     gene            complement(4313..5356)
                     /locus_tag="RJ266_001525"
     CDS             complement(4313..5356)
                     /locus_tag="RJ266_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDV7355249.1"
                     /translation="MKKHILLLGLCLSLSLSAKSVSDYKVGEELSDKEGVEYFKELSK
                     RPVQEWPNKNLSINDVPKGKQGDLIRYGIELLSKTESTLGPYSKLKKTSNEVNCISCH
                     MDNDGNGLPGTKKYVIPFLNILNNYPRLDIETMKIISVEDRIRGMGGTDSHRFPNDSK
                     EMKAILAYFKWLKEAYGIKDGVKLEGDFFAKMNFPNRPADPVRGKKLFEENCVACHGE
                     RGLGVKNDNYEQGSGHLYPSLLIYPDGGHMAMIPFLARFLKSAMPFGASADNPILSDE
                     DALDIAAYVNTGFVRMPITTTENRAGLDTAYSKSPSLKPEYFASPQQNLDPKEYIKVK
                     YGPWKNPNHFPGE"
BASE COUNT         1947 a          844 c          867 g         1788 t
ORIGIN      
        1 atagtttccg gaagaaagat gctagatttt actttgtggt ccgattgtgt tttgttacaa
       61 gtttatagga atactagcaa tcaccataca aatttcttaa aaattttaaa ttttacaatt
      121 ttaatgattt cattgtatgc ttttatgggt tttgtatttt caaaaaccat aaattttata
      181 ttatccttta attcagtatc gataattata gcaagctata ttattttgct tgtatttgct
      241 ttaatgcttg ttaatgttaa aaaacaattg tatcaatatg gcgttatttt gatttttatg
      301 ctttgtggtg cttttacaat atctatgata ttgtttttat catcagagta tatttcaatt
      361 ttttgctttt tgatttattt tttaggcgta ttgatttttt atcttttttt tatttgtaaa
      421 attaaattat ttatttttct tgtgagattt tttgcttata tgatttttat tgcaacgatt
      481 ataacaaaac cacaatttat aaatcctttt acaggtgtat tttcatcaga taagctttat
      541 gaaagtcaat ttgaaaaaag tttaaatgat ttaaatgcga gtgctattgt aaatctagca
      601 agcatattgc aaaatgattt taatctccat ttaaaagatc aaaatatttc ttttacagag
      661 ttaaattcag ctaaagcttt gataatagca aataaagaaa atcttttaaa attaaacgat
      721 gcgaatttaa atataaccaa ggaagtttta ggagaaaaat atacagaact tttaaagatt
      781 ataaatcaag acaagattac agaaaatacc ataaaatcca ctagtgtttt atatagcatt
      841 atacttttgc tttgtatatt ctcactccaa aaaaccgcac gaaaaaattc catagtccca
      901 agctaggcct taaagcttag cttgaaattt tatcatcagt cttttaagta gtattctata
      961 gtagaaacca ctcttatggt tttgatgtaa ggggtgtttt tatccctgtt gctgatgcta
     1021 aattgtcctt gagaagcctt ttttatcttg cctagatggc tgtttgaatc ttgtgcaaat
     1081 tttatcgctg catttctagc attgagtgtt gcttcttcta tcatttgtgg ttttatctca
     1141 tttagcttcg tataaaggta ttctatgtca taatcatcga ttttcgttac tatgccaaat
     1201 tttgcaagac ttgaaatgtt ttctagtatg ctttttccaa gctttacatt ttgagtatag
     1261 atgagtaaat tcgcagtgcc tatgtatcgg tatgtagctt gagtgtcgtt gccataagga
     1321 tcgcttaaac gatctatgat atttggcgag ttgtagctga tctcatcttc ttttatgcct
     1381 tgtttttcta aaaatttgat gatattttct ttatcttgtt ctagttcttc gtataaattt
     1441 gtaagattgt tgtttgatct tgtgaatttt ataggaagta tcaaagtatc cgcttcgact
     1501 tctttttgac ttaaaccctt tacacttaca cttctttcaa gtgttttaaa atcacttaaa
     1561 gccttgttaa atccaaaagc tagaatcaaa cttgccaaaa ctatggctaa agccataaag
     1621 atattatttg ttttcatttt ttctccttta ttttgattag aaaatatatc atatttgcaa
     1681 ccaatacgca agcacacatt acaaaagcaa ggattatcgg cgtatttgca tcgatagctc
     1741 caactatgaa ggagataaaa cctgcaaaac caaattgcat cgttccaagt acagcagaag
     1801 cagttccact atgttcttta aaccttgcca tagccaaagt cgtggtattg ggcgcgatga
     1861 aaccaagcat agcgatactt gtaaaaatac taagttcaaa aagcaagaaa tttgggtgaa
     1921 aaaaagcatt tacaagtaaa atcacagttg atataaacat tatcatcaaa gcttttgcta
     1981 agattttttc gctttcgtat tttaaaacca atcttgcatt gatatttgca cagatgacaa
     2041 aacctaaagc atttgcccca aaaagcaggg caaatttttg ctcacttaag ctaaaaaact
     2101 gcgtaaaaac aaagcttgat cctgtgatat aagcaaacat cgccgccaaa gcaaaagaag
     2161 cacatagtat ataaactaaa aagtgtttat cgcttaaaac aaatttgtag cttttcatcg
     2221 cttcatgatg ggaaaatttt ttgtttttaa gatgaggtgc ggattctttt aaaccaaaaa
     2281 gtatcatcaa aaaaagcaaa attcccaaag caaacaaagt cgcaaaaata ctatgccatg
     2341 aaaaatactc tagcaaaatt cccccaaaag ttggcgaaag cataggagca agagaactaa
     2401 aaaccatcat caaagcaaaa atccctgcag cttctttgat ctcaaataag tcattgacaa
     2461 tagcccttgc gataaccaca cctgcacaac ccccaagtgc ttcaaaaaat ctcaaagcga
     2521 taaaagcata aatatcatcg ataatcacac aaaacaaact cgaaatgatg aagaaaaata
     2581 tccctaccaa agctggaatt ttacgcccaa aaatatcact taaaggccca tatataagct
     2641 gtcctaaagc aaaagcgata aaaaaacttg caatactaag ttgggttaaa aaagaattag
     2701 tttgaaagct ttgttctaca tgagaaagtg cgggtaaata catatctgta gaaagtggcg
     2761 ctatgcttga catcaaagca aggataacga tgagtttaaa tttagcaaag ccgtgaattt
     2821 tggtgtattt ttgcatttgt aatcctaatt attctaaaag aatgatttta acaagtcaat
     2881 cttagaataa tctttgtttt tctatgttaa atttagagaa aaattctaag gaaattttta
     2941 tgctaaattt aaatcaaaat gaacaaatca aatgcccaag ttgcggaagt tttatcgata
     3001 tcagcactgc tttatatact caaattttag ataaagctaa gcaagaaatg ctaaaacaaa
     3061 aaaaagaatt tgatgatgag gtaaatgcta aaagagctga atatatcaaa gctttaaatg
     3121 atttaaaaac tcaaaagata gaacaagaaa aactcataaa cgagcaagta agccaaaagc
     3181 ttcttttaga aaagcaaaaa tttgaacaag aacttcttat acaaaagcaa aatttccaaa
     3241 aagaattcag cgagaaattt aacaaagagc atgaaaatga aatgaaaatc atgcaagaag
     3301 aactcgagaa aaaaagcaaa gaacttagcg agtttttaag cataaaggct gaaaatgaaa
     3361 gactcaaaag agagcaaaaa gaaaatgaag aaagattgaa atttcaagcc aaagaagagg
     3421 cttttaaaga atttaaagaa caagaaagca aaaatttgga atttgaaaga gaaaaaatgc
     3481 gtcttgaatt tcaaaaaagt actcaagagc aagatcttaa atacaaagaa ctagaaacga
     3541 attttaaaag tgtagctcaa aagctagaag acgcacaacg caggatagaa caaggttcac
     3601 agcaactcca aggcgaagca gccgaactac tcatagaaga atacatacaa agtgagtatt
     3661 taagcgatga agtaaaagaa gtgccaaagg gcgtaaatgg agctgattgt ctgcatatag
     3721 taaaggataa ttttggaaat atttgtggaa gtattttgta tgagagcaaa cgcactaaag
     3781 aatttaataa agaatggctt gataagctta agctagacag catagccgca aaaagtgata
     3841 tagcggtttt gatcacaaaa actatgccaa aagataaaga aaaaacgcat tttaaagaag
     3901 gaattttgat ttgtactttt aatgaattca aaggtgtttt agcagtgctt agagaaagca
     3961 ttataaacgc ttataaactc aaaaatgctt tacaaaacaa agatgaaaaa aatcacattt
     4021 tatacgaata cttaaattcc aaggaattta atacgcaaat cacttttata cttaaaactt
     4081 atcaaaatat gaaagaagaa ttagaagctg aaaaaagagc tttgcaaaat atatggaaaa
     4141 aaagagaaag agctatagaa aatctaagtt ttaattccac tgccatagtg agttctttaa
     4201 atgcgatatt tagcgactta caaggtggaa atttgatagg cgaagaaggg attaaaagtc
     4261 ttgaaaattt agccaaagat gaggattaat tttgggctaa gcccaaaatt aatcattctc
     4321 ctgggaagtg atttggattt ttccaaggtc cgtattttac ttttatgtat tctttagggt
     4381 ctaaattttg ttgtggtgaa gcaaaatact caggttttaa tgatggggat ttgctataag
     4441 ctgtatcaag tcctgcacga ttttctgtag tggttatagg cattcttaca aaacctgtat
     4501 tgacataagc tgctatatcc agtgcatctt catcgcttaa tataggatta tctgcactcg
     4561 caccaaaagg catggctgat tttaaaaatc ttgctaaaaa tggtatcata gccatgtgtc
     4621 caccatcagg atagataagt aaagatggat ataaatgtcc gctaccttgt tcgtaattat
     4681 cattttttac cccaagtcct ctttcgccat ggcaagcaac gcaattttct tcaaagagtt
     4741 tttttccacg cacagggtca gctgggcgat ttggaaaatt catcttagcg aaaaaatctc
     4801 cttcaagctt tacgccgtct ttgatgccat aagcttcttt tagccattta aaataagcta
     4861 aaattgcttt catttcttta gaatcattag gaaatctatg agagtcagtt ccgcccattc
     4921 cgcgaattct atcttcaaca gagatgattt tcatcgtttc tatgtcaagt cttggataat
     4981 tgtttaggat atttaaaaat ggaataacat atttttttgt ccctggcaaa ccattgccgt
     5041 cattgtccat gtgacaggaa atacaattta cttcgttgct tgtctttttt agcttgctat
     5101 agggtcctag agtactttct gtcttgctta aaagctctat gccataacgg attaaatccc
     5161 cttgcttgcc ttttggaaca tcattgatgc ttaaattttt atttggccat tcttgcacag
     5221 gtcttttgga aagttcctta aaatactcta ctccttcctt gtcgcttaat tcttctccta
     5281 ctttgtaatc actcacgctt ttagcactaa gacttaaact aagacataag ccaagtaata
     5341 aaatgtgttt tttcatgatt ttcctccttt ttatttgcag ttcaaattga ttttaatgta
     5401 ttttttctta aatattaagc ataataagaa taatttaaat aaaatt
//
LOCUS       DAPIWB010000085         5332 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.086, whole genome shotgun sequence.
ACCESSION   DAPIWB010000085 DAPIWB010000000
VERSION     DAPIWB010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5332)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5332)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5332
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.086"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..1233
                     /locus_tag="RJ266_001526"
     CDS             <1..1233
                     /locus_tag="RJ266_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HDV7355250.1"
                     /translation="NFYYRQILEKFENSYFAEDLTKVIIGIDCDYLDANELSFSEFKA
                     KYYEALSKNKICDFAGFFGVFSANFVSLFEKIPLSSKKNYDFPLFLFANAKAYLIYEK
                     NSKMFFKFGASKYFKYLKDDIEPMKKKQKNDFEILNSLEDEKNDFLKMCEKAKEYLLS
                     GDIFQVVLSKQLCIKHQVNAFDYYESLSTLNPSAYMFYFPSKYGVVLGSSPEFLLKIK
                     KREIYLAPIAGTRNLENNCDLLALEKDLLSDEKELSEHKMLVDLARNDASKFGTQTRV
                     ENLFSIIKNKFVMHIVSEVYANMKEDASIFDVIEAVFPAGTLSGAPKIRALEIISELE
                     DCDRGVYGGAVGFLNFNEDITLAILIRCAFFTQDKAYLASGAGIVLQSESQKEYAEIC
                     AKRRALLVAFENLKKENQ"
     gene            1230..2831
                     /gene="trpD"
                     /locus_tag="RJ266_001527"
     CDS             1230..2831
                     /gene="trpD"
                     /locus_tag="RJ266_001527"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HDV7355251.1"
                     /translation="MILLIDNYDSFVFNVKSMLEQLSNDEILVRRNDEISLSEIKNLN
                     PTHIILSPGPKHPSQSGICLEIFKARLNIPVLGICLGHQALALAFDSLVVKMQEPMHA
                     KNSLIKQCKENELFSNLPSNFSVMRYHSLEVKQLSDELEILALDEKGVIMALGHKNLP
                     YYGVQFHPESYFSEYGLQLFSNFLKQDIKKSQKQENPLSFYLQKMSENHFLQSDDFEQ
                     ICKIIMSKDYEILQVAALLILITEKSLNEKSLSAFVRQILRYSQTFSDESEMIDICGT
                     GGDGFKSINVSTTSAFILAALGVKVAKHGNRAISSSSGSTDVLEALNITTPNTLESAL
                     KQLNNQGLSFLHAPFFHPLVGELKEIRSRLGVRTVFNVLGPLLHPNLKLKYQLMGNYH
                     APVHRLLIEVLKNLGRKKALVVRGNDGMDELSICDESKIYELCEGEILEYSICPEQFG
                     FKRAFHSEIIGSSAYENAKDLKDILSGKMQGAKFDLVVLNAMFALYTANKASSPLVAK
                     DIILEAIYSGKVIEYFKEYQAYAKA"
     gene            2818..3417
                     /locus_tag="RJ266_001528"
     CDS             2818..3417
                     /locus_tag="RJ266_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HDV7355252.1"
                     /translation="MLKLKICGIKDEKNAKDLAFLNIDFFGLIFAKSPRRVSLEQARN
                     LSAIFHEKDKKVVGVFVDENLEQILRCIQEVKLDGVQIYRTITKEEFEILKVQNVFVW
                     QVISVEDSLDLKSEIFADLVLFDAKGILKGGNGISFNWTLLSSYTKDFVLAGGIGLDN
                     IHKAVKTGAKILDLNSKLEDEKGLKDINKIKQILKELKK"
     gene            3414..4592
                     /gene="trpB"
                     /locus_tag="RJ266_001529"
     CDS             3414..4592
                     /gene="trpB"
                     /locus_tag="RJ266_001529"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HDV7355253.1"
                     /translation="MKKAYYGDFGGQFLPESAMFALNELESAFLKFSKDKLFKKELNE
                     LLKTYVGRPTPLYFARNLSKKYQHEIYLKREDLNHTGAHKINNAIAQALLAKKMGKKK
                     IIAETGAGQHGLATATAAALLGLECEIYMGATDVQRQALNVYKMELLGAKIHAVQSGL
                     KTLKEATTAAIQAWVGDIKNIFYVVGSAVGPYPYPKMVTHFQSIIGKECKMQLQKLNK
                     KVDYIIAAVGGGSNAAGIFYDFIKDENVKLIGIEAGGLGIDTPYHAATLNKGKTGIIH
                     GMKTKVLQDDLGNILPVHSVSAGLDYPGIGPLHAFLFESKRAQYHAISDEECMQALKL
                     LCKEEGIIAAIESSHALAFLEKLCPTLKKKSVIVVNLSGRGDKDMQMIRDYKKGVIYG
                     "
     gene            4585..>5332
                     /locus_tag="RJ266_001530"
     CDS             4585..>5332
                     /locus_tag="RJ266_001530"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HDV7355254.1"
                     /translation="MVDFRKFYKENANVAYTVLGYPNLQTSEAFLQRLDQSPIDILEL
                     GVAYSDPIADGEIIADAAKIALDQGVDIYNVFELLARIKTKKALVFMVYYNLIFSYGL
                     EKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKH
                     AKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRKVA
                     DGVIVGTSIVKCFKQGNLDIIMKDIEEIFKK"
BASE COUNT         1888 a          589 c         1045 g         1810 t
ORIGIN      
        1 aatttttatt acagacaaat ccttgaaaaa tttgaaaatt cttattttgc agaggatttg
       61 actaaggtaa ttatagggat tgattgtgat tatttagatg ctaatgaatt atcctttagc
      121 gagtttaaag caaaatatta tgaagcttta agcaagaata aaatttgcga ctttgctgga
      181 ttttttggag tttttagtgc aaattttgta tctttgtttg aaaaaattcc actttcttct
      241 aagaaaaatt atgattttcc tttattttta tttgccaatg ctaaagctta tttgatttat
      301 gagaaaaata gcaagatgtt ttttaaattt ggtgcttcaa aatattttaa atatttaaaa
      361 gatgatattg aaccaatgaa aaagaagcaa aaaaatgatt ttgaaatttt aaactcttta
      421 gaagatgaga aaaatgattt tttaaaaatg tgtgaaaaag ctaaagaata tcttttaagt
      481 ggagatattt ttcaagtggt cttaagtaag caactttgca tcaagcatca agtaaatgct
      541 tttgattatt atgagagttt aagtacttta aatccaagtg cttatatgtt ttattttcca
      601 agcaaatatg gcgttgtttt aggttcttct ccagagtttt tattaaaaat taaaaaaaga
      661 gagatttatt tagcccctat tgcaggaact agaaatttgg aaaataactg tgatctttta
      721 gctttagaaa aagatctttt aagtgatgaa aaagaactta gtgaacataa gatgcttgta
      781 gatttagcaa gaaatgatgc ttctaaattt ggcactcaaa caagagtgga aaatcttttt
      841 tctattatta aaaataaatt tgtaatgcac atagtgagtg aagtgtatgc caatatgaaa
      901 gaagatgcga gtattttcga tgtgattgag gcagtttttc cagcgggaac tttaagcgga
      961 gctcctaaaa taagagcttt agagatcatt agtgagcttg aggattgtga tcgtggagtt
     1021 tatggtggtg cggtaggatt tttaaatttt aacgaagaca taactttagc gattttaatt
     1081 cgttgcgctt tttttactca agataaggct tatttggcaa gtggggcggg tattgttttg
     1141 caaagtgaga gtcaaaaaga atatgcagaa atttgtgcta aacgtagggc gcttttggta
     1201 gcttttgaaa atttaaaaaa ggaaaatcaa tgatactttt aattgataat tatgattctt
     1261 ttgtttttaa tgttaaaagc atgttagagc aactcagcaa tgatgaaatt ttagtaagaa
     1321 gaaatgatga aatttctctg agtgaaatta aaaatttaaa tcctactcat attattttaa
     1381 gtcctggtcc aaagcatcca agtcaaagtg ggatttgtct tgaaattttt aaagcaaggc
     1441 ttaatatccc tgttttgggc atttgtttag gacatcaagc tttagcttta gcttttgatt
     1501 ctttagtggt taagatgcaa gagcctatgc atgcaaaaaa ttctttgata aaacaatgca
     1561 aggaaaatga attattttct aatttgcctt caaattttag cgtgatgcgt tatcattctt
     1621 tagaggttaa acagcttagt gatgagcttg aaattttagc ccttgatgaa aagggtgtga
     1681 ttatggcttt gggacataaa aatttacctt attatggtgt gcaatttcat cctgaaagct
     1741 attttagtga atatggctta cagctttttt ctaatttttt aaaacaagat ataaaaaaat
     1801 cacaaaaaca agaaaatcct ttaagttttt atttgcaaaa aatgagtgaa aatcattttt
     1861 tacaaagcga tgattttgag caaatttgta agattattat gtctaaagat tatgaaattt
     1921 tgcaagtggc ggctttgttg attttaatca ctgaaaagtc tttaaatgaa aaatctttaa
     1981 gtgcttttgt aagacaaatt ttaagatatt ctcaaacttt tagtgatgag agtgagatga
     2041 ttgatatttg tggaacaggt ggagatggtt ttaaaagtat caatgtttct acgactagtg
     2101 cttttatttt agcagcttta ggagtaaaag tagccaaaca cggaaatcgt gccatttcaa
     2161 gttctagcgg aagtacagat gtgttagaag ctttaaatat aactactcca aacactttag
     2221 aatcagcttt aaaacaacta aacaatcaag ggcttagttt tttacatgct ccatttttcc
     2281 atcctttagt aggagaactt aaagagatca gatcaagact tggagtaaga acggttttta
     2341 atgttttagg tcctttattg caccctaatt taaagttaaa atatcaactt atgggaaatt
     2401 atcacgcacc tgtgcatagg cttttgatag aggttttaaa aaatttagga cgcaaaaaag
     2461 ctttagtggt aagaggaaat gatggtatgg atgagcttag tatttgcgat gaaagtaaaa
     2521 tttatgagct ttgtgaagga gaaattttag agtattctat ctgtcctgaa caatttggtt
     2581 ttaaaagagc ttttcatagt gaaatcatag gatctagtgc atatgaaaac gctaaggatt
     2641 taaaagatat tttaagtggt aaaatgcaag gagcaaaatt tgatttagta gttttaaatg
     2701 ctatgtttgc actttataca gccaataaag caagttcgcc tttagtggct aaagatataa
     2761 ttttagaagc catttattca ggtaaagtta tagagtattt taaggagtat caagcttatg
     2821 ctaaagctta aaatttgtgg cattaaagat gaaaaaaatg ctaaagattt agctttttta
     2881 aatattgatt tttttggact tatttttgct aaaagtccaa gaagagtgag tttagaacaa
     2941 gcaagaaatt taagtgcaat ttttcatgaa aaagataaaa aagttgtcgg tgtttttgta
     3001 gatgaaaatt tggaacaaat tttaagatgt attcaagaag ttaagcttga tggagtacaa
     3061 atttatcgca ctattaccaa agaagaattt gaaattttaa aggtgcaaaa tgtttttgta
     3121 tggcaggtga taagtgtgga agatagttta gatttaaaaa gtgaaatttt tgctgattta
     3181 gtgctttttg atgctaaggg aattttaaag ggcggtaatg gaataagttt taattggact
     3241 ttattaagtt cttatactaa agattttgta ttagctggag gcataggttt ggataatatt
     3301 cataaggccg taaaaacagg agctaaaatt ttagatctta attcgaagct tgaagatgaa
     3361 aaaggcttaa aagatatcaa caaaataaaa caaattttaa aggagttgaa aaaatgaaaa
     3421 aagcatatta tggggatttt ggtgggcagt ttttgcctga aagtgcaatg tttgctttaa
     3481 atgagctaga aagtgctttt ttgaaatttt ctaaagataa actctttaaa aaagaattaa
     3541 acgagctttt aaaaacttat gtggggcgtc ctactccgct ttattttgct agaaatttaa
     3601 gcaaaaaata tcagcatgaa atttatttaa aacgcgagga tttaaatcat actggagcac
     3661 ataaaatcaa taatgccatc gctcaagccc ttttagcaaa aaaaatggga aagaaaaaaa
     3721 tcatagcaga aacaggagca ggtcaacacg gacttgcaac agccactgca gcagcacttt
     3781 taggacttga atgtgaaatt tatatggggg caactgatgt acaaagacag gctttaaatg
     3841 tttataaaat ggagcttttg ggtgctaaaa ttcatgcagt acaaagtggg cttaaaactc
     3901 taaaagaagc tactactgcg gctattcaag cttgggttgg agatattaaa aatatttttt
     3961 atgtggttgg aagtgcggta ggtccttatc cttatcctaa aatggtaacg cattttcaaa
     4021 gcattatagg aaaagaatgc aaaatgcaac ttcaaaaact caataaaaaa gtagattata
     4081 ttatcgcagc tgttgggggt ggaagcaatg cagctgggat tttttatgat tttatcaaag
     4141 atgaaaatgt taaacttata ggtattgaag caggggggct tggcattgat acgccttatc
     4201 atgcagcgac tttaaataag ggaaaaacag gcattattca cggtatgaaa accaaggttt
     4261 tacaagatga tttaggcaat atcttgcctg tgcatagtgt ttctgcaggg cttgattatc
     4321 caggaattgg ccctttgcat gcttttttat ttgaaagtaa aagagcgcaa tatcatgcta
     4381 taagtgatga agaatgtatg caagctttaa aattactttg caaagaggaa ggtattattg
     4441 cagcgattga aagttcgcat gctttagcgt ttttagaaaa actttgtcca actttaaaaa
     4501 agaaaagcgt gatagtagta aatctttcag gtaggggaga taaggatatg caaatgatta
     4561 gagattataa aaaaggggtg atttatggtt gattttagaa aattttataa agaaaatgca
     4621 aatgtggctt atacggtttt aggttatcca aatcttcaaa caagtgaagc ttttttgcaa
     4681 agattagatc aaagccctat tgatatttta gaacttggtg ttgcttatag tgatcctatt
     4741 gccgatggtg agattattgc agatgcggca aaaatagctc ttgatcaagg tgtagatatt
     4801 tacaatgttt ttgagctttt agctaggatc aaaactaaaa aagctttggt ttttatggtt
     4861 tattataatt taattttttc ttatggcttg gaaaaatttg tgaaaaaagc aaaatcttta
     4921 gggatttgtg ctttgattgt acctgaatta agttttgaag aaagtgatga tttaattaaa
     4981 gagtgtgaaa gatataatat agctttaatc acacttgtaa gcgttacaac ccctaaagaa
     5041 agggttaaaa agttggtaaa acatgctaaa ggttttattt atttattagc aagtataggt
     5101 attacaggta caaaaagtgt cgaagaagca atcttacaag ataaagtaaa agaaatcaga
     5161 tcttttacaa atttgcctat ttttgtaggt tttggcattc aaaataatca agatgtaaaa
     5221 agaatgagaa aagttgctga tggagtgatt gtgggaacta gcatagtaaa gtgttttaaa
     5281 caaggaaatt tggatataat aatgaaagat attgaagaaa ttttcaaaaa at
//
LOCUS       DAPIWB010000086         5055 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.087, whole genome shotgun sequence.
ACCESSION   DAPIWB010000086 DAPIWB010000000
VERSION     DAPIWB010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5055)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5055)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5055
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.087"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            40..648
                     /gene="plsY"
                     /locus_tag="RJ266_001531"
     CDS             40..648
                     /gene="plsY"
                     /locus_tag="RJ266_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HDV7355255.1"
                     /translation="MENLIIYAFIYLLGSIPFGLILAKFFAKTDIKKEGSKSIGATNV
                     LRVVKEKNPKLAKKLAIATIILDFAKAAIPLLTLKFLHYDQALLWSVAVLAILGHCFS
                     IYLLFEGGKGIATGAGAMIVLLPLEVLTAFIVWVVIGKIFKISSLASLAALLAFVVSS
                     FIFNYDLEIHTHAPVFIIAFIIVYKHLPNIKRLIFKEECKVI"
     gene            633..950
                     /locus_tag="RJ266_001532"
     CDS             633..950
                     /locus_tag="RJ266_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HDV7355256.1"
                     /translation="MQSHIKIKFHFKCIIGILDFERRKKQKIIIKLKAKANEFLNYAE
                     VITKIKTWYKKEEFYTLEESLDFVSLNLKKDFPNLTNLNIKIFKPHIIKNATVGVKLK
                     KKY"
     gene            1029..1700
                     /gene="hsrA"
                     /locus_tag="RJ266_001533"
     CDS             1029..1700
                     /gene="hsrA"
                     /locus_tag="RJ266_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homeostatic response regulator transcription
                     factor HsrA"
                     /protein_id="HDV7355257.1"
                     /translation="MRILVIEDEISLNKTIIDNLNEFGYQTDSSENFKDGEYFIGIRH
                     YDLVLANWTLPDGDGAELVNTIKHKSPRTSVMIMSSKTDKETEIKALKAGADDFVTKP
                     LDFDILLARIEARLRLGGTNVIKIEDLVIDPDEEKITYKDQDIELKGKPFEVLTHLAR
                     HSDQIVSKEQLLDAIWEEPELVTPNVIEVAINQIRQKMDKPLNISTIETVRRRGYRFC
                     FPKKS"
     gene            1813..2058
                     /locus_tag="RJ266_001534"
     CDS             1813..2058
                     /locus_tag="RJ266_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HDV7355258.1"
                     /translation="MSLLITKDCVCCDACREECPDEAIYENSPIYVIDPDLCSECIND
                     FSEPACIVACPYECIIPDPDNVETIEELKLKHRDREF"
     gene            2058..3518
                     /locus_tag="RJ266_001535"
     CDS             2058..3518
                     /locus_tag="RJ266_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HDV7355259.1"
                     /translation="MAKKTAVVDLGSNSIRMVIFEKTSRYGFYTTCEYKRKVRLGENA
                     YNNGKILQEEAMQRAEDALAFFKQCALKHKCKKIFIVGTSALRDAPNSKNFIKRIKDN
                     LSLNIRCIDGKSESYLGGLAALNLLSPFKDGTTLDIGGGSSELCLIKNNRIISCISLD
                     IGTVRLKELFYDTGKMDSLEEFIKPILEQIPKEFYNQNLIAIGGSLRAISNSIMQKNS
                     YPLKNLHDFRYMLDEEKGHILKIFNSNLDSLINFGIKKDRFDTIKEGIFIFLKIAEKI
                     KAKQVITSGVGIREGVYLQDLLRPKITFPPNFNPSLKCLQDKFLQSKQKNKTPHFALQ
                     IFTTLKNLHKLNDNYKHTLLNAAKLCHIGEYLNFYFANEHSAHFVLGGLNYGFSHKEK
                     ALIASIIKLNGKKVNPYNLEPYKQLLPNIHTISWLNFILCLAKTLSTNEDKIDFAFAN
                     NTLYIYQENKILNLPKDELKKIAKPATIALAINQKI"
     gene            complement(3515..4312)
                     /locus_tag="RJ266_001536"
     CDS             complement(3515..4312)
                     /locus_tag="RJ266_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355260.1"
                     /translation="MRLLVLFFLILPLYSVELISFNIYDRNDRVDLMLSFDNAYNGKI
                     SQKKEKNLTLLTFSDLTYSKDELKELNSQLVDKISISSKNNNTYIMLQNKQNINLELS
                     SINDKFGVRIRAIEQGKANIESVPTTTVNNSQELMPKPKSTSLEGYDYTNYILVMLIL
                     VILLIVLWWFKKTMVYKNNNVSRDFTMIFQRFLDKNNQLVIFDHANKRYTMIIGNSNV
                     LLESVEIPEEQTIKHTEKTEKNFDSFFEENKKRIQNLIEQRQKGKKS"
     gene            complement(4313..4621)
                     /gene="fliN"
                     /locus_tag="RJ266_001537"
     CDS             complement(4313..4621)
                     /gene="fliN"
                     /locus_tag="RJ266_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HDV7355261.1"
                     /translation="MSDDIEFSIHHGLLQSYEDILDITVDFVSELGTTNMSVAELLKL
                     EVGSVIDLEKPAGESVELYINKRIFGKGEVMVYEKNLAIRINEILDSKTVLQYFKKEI
                     "
     gene            complement(4621..5043)
                     /locus_tag="RJ266_001538"
     CDS             complement(4621..5043)
                     /locus_tag="RJ266_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheX"
                     /protein_id="HDV7355262.1"
                     /translation="MLKILEYSITHFCEHILRLRIEAAQDISGELYGASIPIMGKSEG
                     ECNFYLFFPKEFLKKIAEILINDEKFKEDDWCDLTKECANQIIGYAKNLLNDAKGDDE
                     YKLGIPEYLGKVDFSEIVLDEALTYKFENCYFRIGYCK"
BASE COUNT         1850 a          750 c          687 g         1768 t
ORIGIN      
        1 ataaatctta aaattttaag atgatttgaa aaggatatta tggaaaattt aataatttac
       61 gcttttatat atcttttagg ttcaatccct tttgggctaa tcctagctaa attttttgct
      121 aaaactgata tcaaaaaaga aggttcaaaa agtataggag caaccaatgt tttaagagta
      181 gtaaaagaaa aaaatcccaa actagcaaaa aaacttgcca ttgctacaat aattttagat
      241 tttgcaaaag cagctattcc tttattaacc ttgaaatttc ttcattatga tcaagctttg
      301 ctttggagcg tggcagtttt ggctattttg ggacactgtt tttcaattta cttgttattt
      361 gaaggaggga aaggcatagc aacaggagca ggtgctatga tagttttgct tccattggaa
      421 gtgcttacag catttattgt atgggtagtt ataggaaaaa tttttaaaat atcttcgtta
      481 gcttctttag cagcgttact tgcttttgtt gtaagttctt ttatatttaa ttatgactta
      541 gaaattcata cacatgcacc cgttttcatt atcgctttta ttatagtata taaacatcta
      601 cctaatatta aaagattgat ttttaaagaa gaatgcaaag tcatataaaa ataaaatttc
      661 actttaagtg tatcattggt atattagatt tcgaaagaag gaaaaaacaa aaaattatta
      721 tcaagcttaa agctaaagca aatgaatttt taaattatgc agaagtaatt accaaaatta
      781 aaacatggta taaaaaagaa gaattttaca cccttgaaga gtctttagac tttgtaagct
      841 taaatttaaa aaaagatttt cctaatttaa ccaatcttaa cataaaaatt ttcaaacccc
      901 atataataaa aaatgctaca gttggggtta aattgaaaaa aaaatattaa ttttttttta
      961 aagatatcta aacatttact taagctatga tataattctt taaatttttc ttaataagga
     1021 tagaacaaat gagaatttta gttatagaag atgagattag cctaaataaa acaattatag
     1081 acaatcttaa tgaatttggt tatcaaactg attcttctga aaattttaaa gatggagaat
     1141 actttatcgg cattagacat tatgatttag ttttagcaaa ctggacttta cctgatggag
     1201 atggagcgga acttgttaac actattaagc ataaatctcc aagaacttca gttatgatta
     1261 tgtcttcaaa aacagacaaa gaaacagaaa tcaaagcttt gaaagctgga gctgatgatt
     1321 ttgttacaaa acctttagat tttgatattc tactcgcaag aattgaagca agactaagac
     1381 ttggcggaac caatgttatt aaaattgaag acttagttat tgatccagat gaggaaaaaa
     1441 ttacttataa agatcaagat atagaactta aaggaaaacc ttttgaagtt ttaacgcact
     1501 tagcaagaca ttcggatcaa attgtatcca aagaacaact tttagatgcc atctgggaag
     1561 aacctgagct agtaactcca aatgttatcg aagtagctat caatcaaatt cgtcaaaaaa
     1621 tggataaacc attaaatata tctaccatag aaacagttcg tcgtagagga taccgtttct
     1681 gcttccctaa aaaatcttaa caattttgca ccttcggtgc aaaaaattta tctttatttc
     1741 tatttttata ttttatttaa gtttggttat tgtataaact aaaattattt tttaaatttt
     1801 tgaaaggtta tgatgtctct tttaattaca aaagactgcg tatgttgtga tgcttgcaga
     1861 gaagaatgtc ctgatgaagc tatttatgaa aatagtccaa tttatgtaat agaccctgat
     1921 ctttgttcag agtgcattaa tgatttttca gagcctgcct gtattgttgc ttgcccatat
     1981 gaatgtatca ttcctgatcc tgataatgta gaaactatag aagaattaaa actcaaacat
     2041 agagatagag aattttaatg gcaaaaaaaa cagccgttgt tgatcttggc tcaaactcca
     2101 ttagaatggt gatttttgaa aaaacttcta gatatggttt ttatacaact tgcgaataca
     2161 aacgcaaagt aagacttgga gaaaatgctt ataataatgg caaaattctc caagaagaag
     2221 ccatgcaaag agccgaagat gccttagctt ttttcaaaca atgcgcttta aagcataagt
     2281 gcaaaaaaat atttatagta ggcacatcag ccttaagaga tgccccaaat tcaaaaaatt
     2341 tcattaaaag aatcaaagat aatctgtctt taaatatacg ctgtatagat ggaaaaagcg
     2401 aaagttactt aggtggtctt gcagctctaa atttattaag tccttttaag gatggaacca
     2461 ctttagacat aggtggtggt tctagtgaat tgtgtttaat aaaaaataat agaattattt
     2521 cttgcatatc tcttgatatt ggcactgtta ggctaaaaga attgttctat gatactggaa
     2581 aaatggattc tttagaagaa tttataaaac caattttaga acaaattcct aaagaatttt
     2641 acaatcaaaa ccttattgca ataggtggaa gcttaagagc aatatctaat tccatcatgc
     2701 aaaaaaattc ctatccactg aaaaatttac atgattttcg ctatatgcta gatgaagaaa
     2761 aaggacatat tttaaaaatt tttaattcaa acttagactc tttaatcaat tttggcataa
     2821 aaaaggatcg ttttgatacc attaaagagg gtatatttat ttttttaaag attgcggaaa
     2881 aaataaaagc caaacaagtt atcacgagtg gggttggaat cagagaagga gtttatttgc
     2941 aagatttact tcgtcctaaa atcacatttc caccaaattt caatcccagt ttaaaatgtt
     3001 tgcaagataa atttttacaa tcaaaacaaa aaaataaaac tccacatttt gctctgcaaa
     3061 tttttacaac ccttaaaaat cttcataaac ttaacgataa ctataagcat actttactaa
     3121 atgctgccaa attatgccat attggagaat atttaaattt ctattttgct aatgaacact
     3181 ctgctcattt tgtactaggt ggattaaatt atggattttc gcataaagaa aaagctttaa
     3241 ttgctagtat tattaagctt aatggaaaaa aagttaatcc ttataatctt gaaccctata
     3301 aacaactttt acccaatatt cataccattt catggcttaa ttttattttg tgcttagcta
     3361 aaactttaag cacaaatgaa gataagattg attttgcttt tgcaaacaat actctttata
     3421 tatatcaaga aaacaaaatt cttaatttac ccaaagatga gctcaaaaaa attgcaaaac
     3481 cagctaccat agcattagca atcaatcaaa aaatttaaga ttttttacct ttttgacgct
     3541 gctctataag attttgaatt ctttttttat tctcttcaaa aaaagaatca aaatttttct
     3601 ctgttttttc tgtatgtttt attgtttgtt cctctggaat ttcaacactt tctaaaagca
     3661 cattggaatt acctattatc attgtataac gtttattagc gtgatcaaaa ataacaagtt
     3721 gattattttt atctaaaaat ctttggaaaa tcatagtaaa atctctagaa acattgttat
     3781 ttttataaac catagtcttt ttaaaccacc aaagcactat taacaaaata actaaaatta
     3841 gcattactaa gatataattt gtataatcat acccttctaa acttgtactt tttggtttag
     3901 gcattaattc ttgagaatta ttcacagtag ttgtaggtac agattcgata tttgcttttc
     3961 cttgctctat agctcgtatc cttactccaa atttatcatt gatagagcta agttctaaat
     4021 taatattttg tttgttttgt agcataatat aggtattatt atttttagaa ctaatactaa
     4081 ttttatctac aagttgagag ttaagttctt ttaattcatc tttagaatac gttaaatcac
     4141 taaaagttaa aagagttaaa tttttttctt ttttttgaga aatcttgcca ttataggcat
     4201 tatcaaaaga aagcattaaa tctactcgat catttctatc gtagatatta aaactaatca
     4261 gctcaacact atataaaggt aaaattaaaa aaaataatac tagcaatctc atttaaattt
     4321 cttttttaaa gtattgaagc acagtcttag aatccaaaat ttcattaatt cttatagcga
     4381 gatttttttc ataaaccata acctcgcctt tgccaaaaat tcttttattg atataaagct
     4441 caacgctttc tccagcaggc ttttcaagat caataaccga acctacttca agttttaaaa
     4501 gctccgctac actcatattt gtagttccaa gctcgcttac aaaatctact gtaatatcta
     4561 agatatcttc ataagattgt aaaagcccat gatgaatgct aaactctata tcatcgctca
     4621 ttatttgcaa tatcctattc taaaataaca attttcaaat ttataagtta aagcttcatc
     4681 tagaactatt tcagaaaaat caacttttcc taaatattcc ggaattccga gtttatactc
     4741 gtcatcaccc ttggcatcat ttaacaaatt tttagcataa cctataatct gattggcaca
     4801 ttctttagtt aaatcgcacc agtcatcttc tttaaatttt tcatcattaa ttaaaatttc
     4861 tgcaattttt tttaaaaatt cttttggaaa aaataaataa aaattacatt ctccttcgct
     4921 tttgcccatg ataggaatac tcgctccata aagttcaccg cttatatctt gagctgcttc
     4981 aatgcgaagt cttaagatat gctcgcaaaa atgagtgatg gaatactcaa gaatctttaa
     5041 catagctacc acctt
//
LOCUS       DAPIWB010000087         5047 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.088, whole genome shotgun sequence.
ACCESSION   DAPIWB010000087 DAPIWB010000000
VERSION     DAPIWB010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5047)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5047)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5047
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.088"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(64..573)
                     /locus_tag="RJ266_001539"
     CDS             complement(64..573)
                     /locus_tag="RJ266_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2393 family protein"
                     /protein_id="HDV7355263.1"
                     /translation="MHFTIFHIIVFIILLICFALICILIFLKVKQKEMALISYTIATI
                     FTALLIYSIFLTINQFTTQADLSKLTYTRDLRHESVIVNGKVQNLTKFEIKKCYLILS
                     ILNQQQVGGEIFNDKNIRNAKMQNTSVSYTIEIIDTLPGNTYKEFRASVPFPPTFNNP
                     EFYHTLKCI"
     gene            complement(573..1103)
                     /locus_tag="RJ266_001540"
     CDS             complement(573..1103)
                     /locus_tag="RJ266_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2393 domain-containing protein"
                     /protein_id="HDV7355264.1"
                     /translation="MEKLREIVLFYTTHLYLVDYMLILLVFFLFTCVLLLCVFLRHRP
                     IAALFIIAFDIIICFLVYIYGYKLIDNEVRTRKTAITDQKMIQSSNDLIVDFNITNNS
                     KNNFKECKITAKIFADKIPNDNIIEEYKKKFIPFRQKSREIKDLKKNATQFQRIAFEN
                     FNYENNYTIRLVSECF"
     gene            complement(1115..2203)
                     /locus_tag="RJ266_001541"
     CDS             complement(1115..2203)
                     /locus_tag="RJ266_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prohibitin family protein"
                     /protein_id="HDV7355265.1"
                     /translation="MPADLNDYFNKKNGNSNNNGNNNRQNFNFKAPEFNFKGFGKFSP
                     FVYGVIIIILFLIVAKPFMVINSGEMGIKSTTGKYDPNPLEPGLHFFLPFVQKITIID
                     TRVRQINYASIEGSNENLSSGSGVINKNSISVLDSRGLPVSIDVTVQYRLNPLQVPQT
                     IATWSLNWENKIIDPVVRDVVRSVVGKYTAEELPTNRNTIAAQIEEGIRKTIEAQPNE
                     PVELRAVQLREIILPSKVKEQIERVQIAKQEAERTKYEVERANQEALKKAALAEGEAN
                     ATIISAKGKAMAVKIEADAQAYSNKEIANSLNTPLLNLKQIETQKEFNEALKVNQDAK
                     IFLTPGGAVPNIWVDTKDAKKQSAANMN"
     gene            complement(2216..3130)
                     /gene="ilvE"
                     /locus_tag="RJ266_001542"
     CDS             complement(2216..3130)
                     /gene="ilvE"
                     /locus_tag="RJ266_001542"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HDV7355266.1"
                     /translation="MISADKIWMDGKLVDFKDATLHFLTHSLHYGNAVFEGTRAYKTD
                     KGLAIFRLEDHTKRLLESAKITLLKCPFSQKELENAQIELLKANNFKSNVYIRPLIFL
                     GDGVMGLYHIKAPVRVGIAAWEWGAYLGEEGLEKGIKVKISSFARNSVKSCMGKAKAS
                     ANYLNSQIAKFEAIEAGYEEALMLDEEGFIAEGTGECFFIIKDGVLITPPNDFSLKSI
                     TQDTVLKIAHDLGITVLRQRISRDEVYTADEAFFTGTAAEITPINNIDARIIGNGLRG
                     SVTKKLQDAYFDVVYGRNEKYASMLTYI"
     gene            3306..3512
                     /locus_tag="RJ266_001543"
     CDS             3306..3512
                     /locus_tag="RJ266_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HDV7355267.1"
                     /translation="MPLVNIKLAKPSLSKEQKAELIADITELLSTKYNKSKERVVVVL
                     EDVENYDIGFGGESVEAIKAKASK"
     gene            3509..3964
                     /gene="bcp"
                     /locus_tag="RJ266_001544"
     CDS             3509..3964
                     /gene="bcp"
                     /locus_tag="RJ266_001544"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HDV7355268.1"
                     /translation="MSLNIGDKAPQFELLNQDGVKIALKDFIGKKVILYFYPKDNTPG
                     CTTEACDFSANYDKFGGKNAVIIGISPDSVASHEKFISKFDLKHILLSDSEKEVAKAY
                     GAWGLKKNYGKEYEGLIRSTFVIDETGKIAQIYSNVRVKDHALKVLESL"
     gene            3964..>5047
                     /locus_tag="RJ266_001545"
     CDS             3964..>5047
                     /locus_tag="RJ266_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HDV7355269.1"
                     /translation="MLVHICCSVDSHYFIEELRKTYPDEKIIGYFYDPNIHPLSEYEL
                     RFLDVKRSCDKLGIKLHKGEYEYEKWLNAVSGYEDEPEKGARCEICFDVRMGSSVKFA
                     AKIGEKKLTTTLLTSPKKDLEQLKNALQKECEPYGVEFLAPDFRKNGGTQRQFALAKK
                     EMLYHQNYCGCIYGLKKQKQDKNFIDELMSPVNKQILPASIEARIALYKKVVLWEKKG
                     IKFEILREKFLNYRLLSALIKLDKKPVKSHILFYSHFKNTYTRFSLNEESLKQNLKEG
                     FYRSTKDEMVFVEFWRFNTFFKNKWKNFEDFLKRPLSVQAEIKWRNKLFGAYNLSPII
                     ILENILPSRYEVIAKSEIYHDNQEVLV"
BASE COUNT         1706 a          690 c          832 g         1819 t
ORIGIN      
        1 attattgttt tattatgtga ataattaatg tattttagaa tttttactag ttgatttctt
       61 gaatcaaata cattttaaag tgtgataaaa ttcaggatta ttaaaagttg gaggaaaagg
      121 aacgctagct ctaaattctt tataggtatt acccgggagt gtgtctatga tttctatagt
      181 ataagaaaca cttgtatttt gcattttagc gttacggata tttttatcat tgaaaatttc
      241 acctcctact tgttgttggt ttaatatgct aagtatcaaa tagcattttt tgatttcaaa
      301 tttagtaaga ttttgaactt ttccatttac tataacgctt tcatgtctta gatctcttgt
      361 ataggttagt ttgctaagat cggcttgagt ggtgaattga ttgattgtca gaaaaataga
      421 atatatcaaa agtgcggtaa aaatagtagc tatggtataa gaaatcaaag ccatttcttt
      481 ttgtttgact tttagaaaga ttaaaataca aatcaaggca aagcaaataa gtaaaatgat
      541 aaaaactata atatgaaaaa ttgtaaaatg cattaaaaac actccgaaac taagcgtatg
      601 gtatagttat tttcatagtt aaaattttca aaagcaattc tttgaaattg ggttgcgttt
      661 ttctttagat ctttaatttc tctacttttt tgtctaaaag ggataaattt ctttttatat
      721 tcttctatga tattatcatt aggtatttta tctgcaaaaa ttttagctgt aattttacat
      781 tctttaaaat tattttttga attatttgta atgttaaaat caacaattaa atcatttgag
      841 ctttgtatca ttttttgatc tgtaatagcg gtttttcgag ttcttacttc attgtctatt
      901 agtttatacc catagatata aactaaaaaa caaataataa tatcaaatgc aataataaaa
      961 agtgctgcta taggtctatg gcgtaaaaat acgcaaagaa gtaaaacaca agtgaagaga
     1021 aaaaaaacta ataaaatcag catataatct actaaatata aatgagtagt gtaaaaaagc
     1081 acgatttctc ttagtttctc cacttgtgta tcctttagtt catgttggca gcactttgct
     1141 ttttagcatc tttggtatca acccaaatgt ttggcactgc tccacctgga gttaagaaaa
     1201 ttttagcatc ttgattaact tttaaggctt cattaaattc tttttgagtt tcaatttgtt
     1261 ttaaatttag caaaggggtg tttaggctgt ttgcgatttc tttgttagaa taagcttgtg
     1321 catctgcttc tattttaaca gccatagctt tacctttggc gctgattatg gttgcatttg
     1381 cttccccttc agctaaagca gcttttttta aggcttcttg attagctctt tctacttcat
     1441 atttagttct ttcagcctct tgttttgcaa tttgcacgcg ttcgatttgt tcttttactt
     1501 ttgaaggtaa aataatttct ctaagttgta cagcgcgaag ttctacaggt tcgtttggtt
     1561 gggcttctat ggtttttctt ataccttctt ctatttgagc ggctattgtg ttacgattag
     1621 taggaagttc ttcggctgta tattttccta caacacttcg cactacatca cgaacaactg
     1681 gatcgataat tttattttcc caatttaagc tccaagtagc tatggtttga ggaacttgca
     1741 aaggatttaa acggtattgc actgtaacat caatagatac aggcaatcca cgagaatcaa
     1801 gtacagaaat actattttta ttaataacac ctgaacctga agataaattt tcattacttc
     1861 cctctataga agcatagttg atttgtctta ctctagtatc gattatggtt attttttgta
     1921 caaaaggtaa gaaaaagtga agtcctggtt ctaatggatt tgggtcatat ttacctgttg
     1981 ttgatttaat ccccatttcc ccagaattta tcaccataaa aggttttgca acgattaaaa
     2041 ataagataat aataatcacc ccataaacaa atggagagaa tttcccaaaa cctttaaaat
     2101 taaattctgg tgctttgaaa ttgaaatttt gacggttgtt gtttccgtta ttgttagaat
     2161 ttccattttt tttgttgaaa taatcattca aatcagctgg catttatttc cttttttaaa
     2221 tataagttag catagatgcg tatttttcat tgcgtccata aactacatca aaataagcat
     2281 cttgaagttt tttagttaca gatcctctta aaccatttcc tattattctt gcatcaatat
     2341 tgttaatagg tgtgatttca gcggctgttc cggtaaaaaa tgcttcatca gcagtataaa
     2401 cttcatctct tgaaattctt tggcgaagca cggtgatacc aagatcatga gcgattttaa
     2461 gcactgtatc ttgagtaatg ctttttaaag aaaaatcatt cggaggtgtg attaaaaccc
     2521 catcttttat aataaagaaa cattctcctg ttccttctgc gataaaacct tcttcatcaa
     2581 gcattaaagc ttcttcatag cctgcttcaa tagcttcaaa ttttgcaatt tgagagttaa
     2641 ggtaatttgc gcttgcttta gcttttccca tgcatgattt aacactattt cttgcaaaag
     2701 acgaaatttt tacttttatg cctttttcta aaccttcttc tccaaggtaa gcaccccatt
     2761 cccaagctgc aattccaact cttacaggag cttttatatg ataaagtccc ataactccat
     2821 ctcctaagaa aatcaaaggg cggatataga cattgctttt aaaattgttt gcttttaaga
     2881 gttcaatttg tgcattttca agctcttttt gagaaaaagg acattttaaa agagtaattt
     2941 ttgcagactc taaaagtctt ttggtgtgat cttcaagtct gaaaattgct aagcctttat
     3001 ctgttttata ggctctagtt ccttcaaaaa cagcattgcc ataatgcaaa gaatgggtta
     3061 aaaagtgcaa agttgcatct ttaaaatcaa ctaattttcc atccatccaa attttatctg
     3121 ctgagatcat ttttttacct tttatagctg tttatttctt aaaaaatatt attttaagaa
     3181 taaatcggga ttttatcaaa aatatactaa taataagctt ttattaaatt aaggtttttt
     3241 gttaaaaaaa atattaggta ttttttgaaa taattatgaa aaattatcgt taaaaaggag
     3301 aaattatgcc attggtaaat atcaaattag caaagccgtc tttaagcaag gaacaaaaag
     3361 cggaacttat agctgatatt accgaacttt taagcacgaa atataataaa agtaaagaaa
     3421 gagttgttgt ggttttagaa gatgtggaaa attatgacat aggctttggc ggagaaagtg
     3481 tagaagctat caaagcaaag gcaagtaaat gagtttaaat ataggagata aggcacctca
     3541 atttgagctt ttaaatcaag atggggtaaa aatagcatta aaagatttta ttggcaaaaa
     3601 ggtgattttg tatttttatc caaaagataa taccccaggt tgcactacag aagcttgtga
     3661 ttttagtgca aattatgata aatttggtgg taaaaatgcg gtgattattg gtatcagtcc
     3721 tgatagcgtg gcaagtcatg aaaaatttat ctctaaattt gatttaaaac atattttact
     3781 tagcgatagt gaaaaagaag ttgctaaagc ttatggagct tgggggctta agaaaaatta
     3841 cggaaaagaa tatgaaggtc ttattcgttc tacttttgtt atcgatgaaa caggtaagat
     3901 tgctcaaatt tatagtaatg ttcgtgtaaa agatcatgct ttaaaagtgc ttgaaagtct
     3961 ttaatgctag tacatatttg ttgtagcgta gatagtcatt attttattga agaacttaga
     4021 aagacttatc ctgatgaaaa aatcatagga tatttttatg atccaaatat ccatccttta
     4081 agcgaatacg aactaagatt tttagacgta aaaagatctt gtgataaact tggcattaag
     4141 cttcataaag gtgagtatga gtatgaaaaa tggcttaatg ctgtgagtgg ttatgaagat
     4201 gagcctgaaa aaggtgcaag gtgtgaaatt tgctttgatg taagaatggg atctagtgtt
     4261 aaatttgctg ctaaaatagg agaaaaaaag cttactacta cgcttttaac cagccctaaa
     4321 aaagatttag aacagttaaa aaatgcttta caaaaagaat gtgagcctta tggggtagag
     4381 tttttagctc ctgattttcg taaaaatggc ggcactcaaa ggcagtttgc tttagcaaaa
     4441 aaagaaatgc tttatcatca aaactattgt ggttgtattt atgggcttaa aaaacaaaaa
     4501 caagataaga atttcattga tgaattaatg tctcctgtaa ataagcaaat tttacctgca
     4561 agtatagaag caagaatagc tctttataaa aaagtagttt tatgggaaaa aaagggtata
     4621 aaatttgaaa ttttaagaga gaaattttta aattatcgtc ttttaagcgc tttgataaaa
     4681 ttagataaaa agcccgttaa atctcatatt ttattttatt cgcattttaa aaacacttat
     4741 acaagatttt ctttaaatga agaaagctta aaacagaatt taaaagaagg tttttataga
     4801 agcaccaaag atgaaatggt ttttgtagaa ttttggcgtt ttaatacatt ttttaaaaat
     4861 aaatggaaaa attttgaaga ttttttaaaa agacctttga gtgtgcaagc agaaattaaa
     4921 tggcgcaata aattgtttgg agcttataat cttagcccta ttatcatcct tgaaaatatt
     4981 ttaccttcaa gatatgaagt gatagcaaaa agtgaaattt atcatgataa tcaagaggtg
     5041 cttgtag
//
LOCUS       DAPIWB010000088         4970 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.089, whole genome shotgun sequence.
ACCESSION   DAPIWB010000088 DAPIWB010000000
VERSION     DAPIWB010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4970)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4970)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4970
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.089"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(148..651)
                     /gene="ctf"
                     /locus_tag="RJ266_001546"
     CDS             complement(148..651)
                     /gene="ctf"
                     /locus_tag="RJ266_001546"
                     /EC_number="1.16.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin"
                     /protein_id="HDV7355270.1"
                     /translation="MLSKEIVKLLNEQINKEMYAANLYLSMSSWCYENSLDGAGAFLF
                     AHASEESDHAKKLITYLNETDSHVELQEVKQPEQNFKSLLDVFEKTYEHEQFITKSIN
                     TLVEHMLTHKDYSTFNFLQWYVSEQHEEEALFRGIVDKIKLIGEHGNGLYLADQYIKN
                     IALSRKK"
     gene            831..1826
                     /locus_tag="RJ266_001547"
     CDS             831..1826
                     /locus_tag="RJ266_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDV7355271.1"
                     /translation="MKKILSLSVASLALCGALNAADLKIAGSSTVYPFTSFVAEEYAS
                     IKNTKTPIVESLGTGGGFKVFCEGTTDISNASRPMKLSEFETCKKAGVTDIVGIMIGY
                     DGIVLAQNKTNAPLNITKKELFLALAKEIPQNGKLMPNPYTNWNQINKNLPNRKISVY
                     GPPSSSGTRDTIEELVMSDVSKKIPEYKGEYKTIRQDGAYIPSGENDNLIVSKLTIDK
                     DAFGIFGYSFLVSNSDKINAANIDGVTPSEESIADEKYELARSLFIYINAKKNPKEAF
                     EFAKIYMSDDLAKSGGELEKIGLIPLSDDKLKASQKHVEDRKILNDELVKAGKVF"
     gene            1836..2750
                     /gene="pstC"
                     /locus_tag="RJ266_001548"
     CDS             1836..2750
                     /gene="pstC"
                     /locus_tag="RJ266_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HDV7355272.1"
                     /translation="MLKEKIIKFALFLCAFVSVIVSFAIMLTILIEALKFFQKESVVT
                     FLFSSQWAADAAFMNADGTSKQGVFGALSLFWGTFYISLIAMLTALPLGVMCAIYLGV
                     FAGKKSKNYLKPILEIIAGIPTVVFGFFAAIVVAPFIVWFFSLFGIQASFQSALGAGF
                     IMGIMIVPIVASLSQDCIEAVSEKRINGAYALGMTKKEVVFAVILPEAIPGIVAACLL
                     GLSRALGETMIVVMAASLRPNLTLNFLEDMTTVTVKIVEALSGDQAFDSSLALSAFSL
                     GLVLFVITLIINMFSVYLINRFHKRKNL"
     gene            2747..3835
                     /gene="pstA"
                     /locus_tag="RJ266_001549"
     CDS             2747..3835
                     /gene="pstA"
                     /locus_tag="RJ266_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012857620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HDV7355273.1"
                     /translation="MKKLFKKRQKASKSFKRLCKMGLYINLIFLCIFLGSVAYLGFPA
                     FKQTYIFVEANRNSPAYDLLSRAEQRKIRTGQIAEKSWLLANSEVDQYMKQKYNRLSE
                     KQRTLVDDLMQKGEIELKFNSNFFLNGDSKSPENSGILSSVVGTLLVMLVCMVVSVPI
                     GVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFINLFGMPRSSALVG
                     GLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIMLPLAMPMILTGS
                     ILTLAGAIGETAPLMIIGMIAFIPDVASSIFDSTSVLPAQIYSWSAMPERAFLERTAA
                     GIIVLLGLLVVLNLSAILLRKYFQGKLK"
     gene            3832..4572
                     /locus_tag="RJ266_001550"
     CDS             3832..4572
                     /locus_tag="RJ266_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HDV7355274.1"
                     /translation="MIAKTTNLNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTF
                     LRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFVKSIYENISYA
                     PKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARALAIK
                     PKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGK
                     LIEFGESKEFFENPKQEKTKAYLSGAFG"
     gene            4633..>4970
                     /locus_tag="RJ266_001551"
     CDS             4633..>4970
                     /locus_tag="RJ266_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002852291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HDV7355275.1"
                     /translation="MIINQIYSIDSCDDVELNIKRESKLEFRLTYDDSKEIEAIVCII
                     PGGAEDMNSYIYIDDYLTRNYKVAVININYHCIGNRPHLGSSFYLDDIDKFILDTSLK
                     AINLKCINVY"
BASE COUNT         1670 a          670 c          904 g         1726 t
ORIGIN      
        1 aattaaaatt aaaatatttt gtattttgta atcattttta aaagtccaat aaatagcaaa
       61 aaaagctatc attaaaatac taaattctag agaaaaataa gtcatacctt caatccaaag
      121 cgagatttgc ccatagtagg gcaaagatta tttttttctg cttaatgcaa tatttttgat
      181 gtattgatca gctaaataaa gtccatttcc gtgttctccg attaacttaa tcttgtcaac
      241 tataccgcgg aaaagtgctt cttcttcgtg ttgttcgctt acataccatt gtaagaaatt
      301 aaaagtagaa taatctttat gtgttagcat gtgttcaact aaagtattga ttgattttgt
      361 gataaattgc tcatgttcat aggttttttc aaaaacatca agtaaagatt tgaaattttg
      421 ttcaggctgt tttacttctt gaagctctac atgagaatct gtctcattaa gataagtgat
      481 aagcttttta gcatgatcgc tttcttcgct tgcatgtgca aacaagaagg ctccagctcc
      541 atcaagactg ttttcatagc accaagaact catactaaga tataagtttg ctgcatacat
      601 ttctttgttt atttgttcat tgagtaattt tacaatttct ttagaaagca ttcttatctc
      661 cttattaaaa tttaaaatgt tttataatga tatattattt ttttaaaaac aagctaaatt
      721 ttttgatagt taaaaattat atttaagaaa aatacaaaat aaaaaatgtt tccaaaatgt
      781 ttccaagttt ttttaaactt ccattacttt tttaaagtta aggagaaaaa atgaaaaaaa
      841 ttctatcttt aagtgtggca agtcttgcac tttgtggtgc tttaaatgca gcagatttaa
      901 aaatcgcagg ttcatcgact gtgtatcctt ttacttcttt tgtagctgaa gaatatgctt
      961 cgattaaaaa tacaaaaact cctatagtag agagcttggg aacagggggt ggatttaagg
     1021 tattttgtga aggaactact gatatttcta atgcttcaag acctatgaaa ttaagcgaat
     1081 ttgaaacttg caaaaaagca ggggtaactg atatagtagg gattatgata ggttatgatg
     1141 gtatagtttt agctcaaaat aaaaccaatg ctccattaaa tatcacaaaa aaagaacttt
     1201 tcttagcatt agcaaaagaa attccacaaa atggaaaact tatgccaaat ccttatacaa
     1261 actggaatca aatcaataaa aatttaccaa atcgtaaaat tagtgtttat ggtccaccat
     1321 caagttcagg aacaagagat actatagaag agcttgtaat gagtgatgtg tctaaaaaaa
     1381 ttcctgagta taaaggcgag tataaaacca tacgccaaga tggtgcttat atcccaagtg
     1441 gtgaaaatga taatctaatc gtttcaaaac ttactattga taaggatgct tttggaattt
     1501 ttggttatag ctttttagtg agcaattcag acaaaatcaa tgctgctaat atagatggtg
     1561 ttacgccaag cgaagaaagc atcgcagatg aaaaatacga acttgcaaga agtttgttta
     1621 tttatatcaa tgctaagaaa aatccaaaag aagcctttga atttgcaaaa atttatatga
     1681 gtgatgattt ggcaaaaagt ggtggagagc ttgaaaaaat aggacttatt cctttgagtg
     1741 atgataaatt aaaagcttct caaaaacacg tagaagatag aaaaatttta aatgatgagc
     1801 ttgtaaaagc tggaaaagtt ttttaaggaa aaactttgtt aaaagaaaaa ataatcaaat
     1861 ttgcactttt tttatgtgct tttgtaagcg tgatagtaag ttttgctatc atgcttacaa
     1921 ttttaattga agctttaaaa ttctttcaaa aagaaagcgt tgttaccttt ttattctcaa
     1981 gtcagtgggc agctgatgca gcttttatga atgcagatgg cacgagtaaa caaggtgttt
     2041 ttggggcgct atcgcttttt tggggaactt tttatatttc attgattgct atgctaacgg
     2101 ctttaccttt aggggttatg tgtgctatat atttaggtgt ttttgctggc aaaaaatcta
     2161 aaaattactt aaaacctatt ttagaaatca ttgcagggat tcctactgtt gtttttggat
     2221 tttttgcggc tatagttgta gcgcctttta tagtgtggtt tttttcttta tttggcatac
     2281 aagcaagctt tcaaagtgct ttaggcgcag gttttattat ggggatcatg atagtaccta
     2341 tagtggcttc tttatctcaa gattgcattg aagcagtaag cgagaaaagg attaatggcg
     2401 cttatgcttt aggtatgaca aaaaaagaag tggtttttgc cgtgatttta cctgaggcta
     2461 ttcctggtat agttgcagct tgtcttttag gactttcaag agccttaggc gaaactatga
     2521 tagtggtgat ggcagcttct ttgcgtccaa atttaacttt aaatttttta gaagatatga
     2581 caacggtaac ggtaaaaatc gtagaagctt taagtggaga tcaagctttt gatagttctt
     2641 tggctttaag tgctttttct ttaggtttgg tgctttttgt catcacttta atcatcaata
     2701 tgtttagcgt ttatcttatc aatcgctttc acaaaaggaa aaatttatga aaaaactttt
     2761 taaaaaaaga caaaaagctt caaagtcttt taaaagactt tgtaaaatgg ggctttatat
     2821 taatttaatt tttctttgta tctttttagg aagtgtggct tatcttggat ttcctgcttt
     2881 taagcaaacc tatatttttg tagaggctaa tagaaattct cctgcttatg atcttttatc
     2941 tcgtgctgag caaagaaaga taagaacagg acaaatcgct gaaaaatctt ggcttttggc
     3001 aaattcagaa gtagatcaat atatgaagca aaaatataat cgccttagtg aaaaacaaag
     3061 aactttagtc gatgatctta tgcaaaaagg cgagatagag cttaaattta atagcaattt
     3121 ctttttaaat ggggactcaa aatctcctga aaattcagga attttatctt cagttgtagg
     3181 gactttgctt gttatgcttg tttgtatggt tgtgagtgtt cctataggcg ttgcagcggc
     3241 aatttactta gaagaatttg cgccacaaaa tatccttaca cattttatag aagtgtgtat
     3301 taacaacctt gcaagtattc caagtatctt gtttggactt ttaggacttg gagtgtttat
     3361 caatcttttt ggaatgcctc gctcaagtgc tttagtgggt gggcttactt tggcgatcat
     3421 gagtttacct attatcattg tttcaactaa ggcagcttta aaaagtgtgg acattaacat
     3481 gaaaaatgcc gcttatgcct taggtatgac taaggttcaa atggtaaaag gtattatgtt
     3541 acctttggct atgcctatga ttttaacagg ttctattttg actttagcag gggctatagg
     3601 cgagactgca cctttgatga ttatcggtat gatagccttt atccctgatg tagctagttc
     3661 gatttttgat tcaactagcg ttttgcctgc tcaaatttac tcatggtcgg ctatgccaga
     3721 gcgtgcattt ttagaaagaa ccgcagcggg tattattgtg cttttaggac ttttagtcgt
     3781 attaaatctt agtgcaatat tattaagaaa atattttcaa ggaaaattaa agtgatagca
     3841 aaaacaacaa atttaaattt attttatgga aaaaaacaag ctttatttga tatcaatatg
     3901 caaatagaac aaaacaaaat taccgcactc atcggtgctt caggatgtgg taaatccact
     3961 tttttgcgtt gttttaacag aatgaatgat aaaatcgcaa aaatcgatgg tttagtagaa
     4021 attgaaggaa aagatgttaa aaatcaagat gtagtagcct tacgcaaaaa tgtaggcatg
     4081 gtttttcaac aacctaatgt ttttgtaaaa agcatttatg aaaatatctc ttatgcacca
     4141 aagcttcatg gtatgattaa aaacaaagat gaagaagaag ctttagtggt ggattgctta
     4201 caaaaagtag ggctttttga agaggttaaa gacaaattaa agcaaaatgc cctagctctt
     4261 tcaggcggac aacaacaacg cctttgtatc gcaagagctt tggcgataaa acctaagctt
     4321 ttacttttag atgagccaac ttccgcactt gatcctatta gctcaggtgt tatagaagag
     4381 cttttaaaag aattaagtca taatctttct atgattatgg taacgcacaa catgcaacaa
     4441 ggcaaacgtg tggctgatta tactgcattt tttcacctag gtaagcttat agaatttggt
     4501 gaaagtaaag aattttttga aaatccaaaa caagaaaaaa ccaaggctta cttaagcggt
     4561 gcttttgggt gagatttatt ttttggaaat ttgatgatat aattaattaa aaatttccaa
     4621 aaaaggttta gtatgattat aaaccaaatt tattctatag attcttgtga tgatgtagaa
     4681 ttaaatatca aaagggaaag taaattagaa tttagattaa cttacgatga tagtaaagaa
     4741 atagaagcta ttgtttgtat tattccaggc ggtgctgaag atatgaatag ttatatttat
     4801 attgatgatt atttgactag aaattataaa gtcgctgtta ttaatattaa ctatcattgc
     4861 ataggaaata gacctcattt gggttccagt ttttatttgg atgatataga taaattcatt
     4921 ttagatacta gtttaaaggc tataaattta aaatgtataa atgtttatga
//
LOCUS       DAPIWB010000089         4830 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.090, whole genome shotgun sequence.
ACCESSION   DAPIWB010000089 DAPIWB010000000
VERSION     DAPIWB010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4830)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4830)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4830
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.090"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..561
                     /locus_tag="RJ266_001552"
     CDS             <1..561
                     /locus_tag="RJ266_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HDV7355276.1"
                     /translation="NKIYTKPKEKLIIFASTHKDEEELLLDHFKLEENEKLIIAPRHP
                     ERFKEVENLLLNKGLEFEKFSSLKDENKKFSKKILLLDALGELVNFYAISDVVVLGGS
                     FIEGIGGHNPIEAAYFDNVLISGKFIHNQKVLFEEVENVYFCEKLKDLNDKVHYLNLK
                     AKISKKENLDLIIQTIQKGIDARKSL"
     gene            542..1294
                     /locus_tag="RJ266_001553"
     CDS             542..1294
                     /locus_tag="RJ266_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDV7355277.1"
                     /translation="MQEKAYKLLALQEKISNREAKDLIDKGCVFSYGKKVVVARALMS
                     DKARFNVIKAKNPQIIFEDDKIIAINKPYAYVSEDLEKKFNAKLLNRLDKETSGVILL
                     CKDEDFRKLCIEEFKKHRVYKSYIAVLDGVLAEEVEVNEPIFTIKVKGGALSKVSKDG
                     LSALSIITPIMMQSKKTLAKIVIQTGRTHQIRVHAKFIKHGVVGDEKYAKISSDRMYL
                     HSYEIKIFNYHFRANLDSGFAKFGFDIKNLDF"
     gene            1362..2699
                     /gene="ffh"
                     /locus_tag="RJ266_001554"
     CDS             1362..2699
                     /gene="ffh"
                     /locus_tag="RJ266_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HDV7355278.1"
                     /translation="MFELVSESFKSAINKLRFVDDEKALKNALETLKKALLKADVHHK
                     VTKELLTLIEEDAKQNGIGQKQFLNAIKINLENILSVNGKNQGFVFASKPPTVVLMAG
                     LQGGGKTTSTIKLANYLKLRNKKVLVAACDLQRLAAVEQLRQLCEANEIELFFIENEK
                     DPIRVAKEALKKAESSMVDVLLVDTAGRLAIDEALMDELRAVKDVLNPDEIFYVADAM
                     SGQDGVKTAASFNEVLGISGVILSKFDADTKGGVALGIAKQIGIPLRFIGVGEKVADL
                     EVFIPDRIVSRIMGEGDLATLAEKTAAIIDEKEAKKLNQKIKKGEFNFNDFLNQMESI
                     KKLGSMKSLIGMIPGLGGMANAVKDIDLDNSKEIIRIKAMISSMTPKERENPDLLNNA
                     RKRRIAEGAGLSQVEVNRFLKQFSNAAKLAKRFSGKKGMESLTQMMSQARRQF"
     gene            2764..2991
                     /gene="rpsP"
                     /locus_tag="RJ266_001555"
     CDS             2764..2991
                     /gene="rpsP"
                     /locus_tag="RJ266_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HDV7355279.1"
                     /translation="MTVIRLTRMGRTKRPFYRIVVTDSRKRRDGGWIESIGYYNPMVE
                     PEVIKVDAERLAYWKSVGAKLSDKVASITSK"
     gene            2994..3236
                     /locus_tag="RJ266_001556"
     CDS             2994..3236
                     /locus_tag="RJ266_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HDV7355280.1"
                     /translation="MVENFLREYAKLIADYPEQIDTQKIELSENFFEIVLFAHKVDTG
                     KLIGKNGKMINAIKTVISAYKSKDASSYRVTVKALE"
     gene            3229..3768
                     /gene="rimM"
                     /locus_tag="RJ266_001557"
     CDS             3229..3768
                     /gene="rimM"
                     /locus_tag="RJ266_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA processing protein RimM"
                     /protein_id="HDV7355281.1"
                     /translation="MSEKDFVQVAKLGKTVGLKGYVKLHNLSDFSSQFKKDATFFIKN
                     TKEMLKIKHYNTSNSTVLFENYEDIEKAKELTNLILFQSIEKSRQTCKLKKDEFFYFD
                     ILECEVFEEDKRLGKVVDILETGASYLFEIQSDEKWVEKKYPKIFFIPYLDKFVKNID
                     IEKRQIFCTQDAFLILENS"
     gene            3765..4469
                     /gene="trmD"
                     /locus_tag="RJ266_001558"
     CDS             3765..4469
                     /gene="trmD"
                     /locus_tag="RJ266_001558"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HDV7355282.1"
                     /translation="MKFSFVSLFPNLMEFYFQDSILARAKEKKLFKLNFYNPRDFSKN
                     SYHKVDDYKIGGGAGLLMQAEPMYEVLRSIQEKKENPYFIFLNPSGKTFNQKDAKRLS
                     KKEHIVFVCGRYEGIDERVLEIFANEVFSIGDFILTGGELPALVMCDAILRNVNGVLG
                     NMESLEEESFENNLLEAPAFSKPFIFEKKNKKFYTPSEFLKGNHARIASLKTTLASCK
                     TKFFRPDLFLEHERKK"
     gene            4480..>4830
                     /gene="rplS"
                     /locus_tag="RJ266_001559"
     CDS             4480..>4830
                     /gene="rplS"
                     /locus_tag="RJ266_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HDV7355283.1"
                     /translation="MKNKYIEQFEAKQIEGKNVPDFRAGDTLKLAIRIKEGDKTRIQN
                     FEGICIARRGNGVSETFIVRKIGANNVGVERIFPIYSESLESITVLRRGRVRRARLFY
                     LRDRRGKAARIKELK"
BASE COUNT         1800 a          523 c          933 g         1574 t
ORIGIN      
        1 aataaaattt ataccaaacc taaggaaaaa cttatcattt ttgccagtac gcataaagat
       61 gaagaagagc ttttgcttga tcattttaaa ctagaagaaa atgaaaaact cattatcgcc
      121 ccacgacacc ctgaacgttt taaagaagtt gaaaatttgc ttttaaacaa aggtttagaa
      181 tttgaaaaat ttagttcttt aaaagatgaa aataagaaat tttctaaaaa aattttgctt
      241 ttagatgctt taggggagct tgtaaatttt tatgcaattt ctgatgttgt tgtgcttgga
      301 ggttctttca tagaaggcat aggaggacac aatcctatag aagcggcata ttttgacaat
      361 gtattaatca gtgggaaatt tattcacaat caaaaggttt tgtttgaaga agtggaaaat
      421 gtatattttt gtgaaaaatt aaaggattta aatgataaag ttcattattt aaatttaaaa
      481 gctaaaattt ccaaaaaaga aaatttagat cttatcatac aaactataca aaagggaatt
      541 gatgcaagaa aaagcttata aactcttagc tttgcaagaa aaaatttcaa atcgtgaagc
      601 taaagatttg attgataagg gttgtgtttt ttcatatgga aaaaaagttg tggttgctag
      661 agctttgatg agcgataagg caagatttaa tgtgataaaa gctaaaaatc ctcaaattat
      721 ttttgaagat gataagatta ttgctattaa taaaccttat gcttatgtga gtgaagattt
      781 agagaaaaaa tttaatgcca agcttttaaa tcgtttagac aaagaaacaa gtggtgtgat
      841 tttgctttgt aaagatgaag attttagaaa gctttgtata gaagaattta aaaaacacag
      901 ggtttataaa agttatattg cggttttaga tggggttttg gctgaagagg ttgaagtgaa
      961 tgaacctatt tttactataa aagtaaaagg cggggcgtta agtaaagttt caaaagatgg
     1021 tttaagtgcc ttaagtatca ttactcctat catgatgcag tcaaaaaaaa ccttagcaaa
     1081 aatagttatt caaacaggta gaactcatca aatcagagtg catgctaaat ttataaaaca
     1141 tggcgttgta ggtgatgaaa aatatgctaa aatttcaagc gatagaatgt atttgcatag
     1201 ctatgaaatt aaaattttta attatcattt tagggctaat ttagatagtg gttttgcaaa
     1261 atttggcttt gatataaaaa atttagattt ttaaagccat ttaagaaaaa attttgtata
     1321 atgcaaggtt taatttaaaa attttataga aaggtgataa agtgtttgag ttagtcagcg
     1381 aatcttttaa atcagcgatt aataaattac gttttgttga tgatgaaaaa gcacttaaga
     1441 acgctttaga aaccttaaaa aaagctcttt taaaagcaga tgttcaccat aaggtaacta
     1501 aagagctttt gactttgata gaagaagatg caaagcaaaa cggaataggt caaaaacaat
     1561 ttttaaatgc cattaaaata aatttagaaa atattttaag tgtcaatggc aaaaatcaag
     1621 gttttgtttt tgcttctaaa cccccaacag tagttctaat ggcaggtttg caagggggcg
     1681 gtaagactac aagcactatc aaacttgcaa attatttaaa attacgcaat aaaaaagttt
     1741 tagttgcagc ttgtgattta cagcgtttag cggcagtgga gcagctaaga caactttgtg
     1801 aagctaatga aattgaactt ttcttcatag aaaatgaaaa agatcctatt agggttgcta
     1861 aagaggcttt aaaaaaggct gaaagttcta tggtggatgt tttgcttgtg gatactgctg
     1921 gacgtttggc tatagatgaa gctttgatgg atgagttaag agcagttaag gatgtcttaa
     1981 atcctgatga gattttttat gttgctgatg caatgagtgg tcaagatggg gttaagactg
     2041 ctgctagttt taatgaagtt ttaggtatca gtggggtaat tttatcaaaa tttgatgcag
     2101 atactaaagg tggagtagcc ttaggtatag caaaacaaat cggtattcct ttaagattta
     2161 ttggtgtggg tgaaaaagta gcagatttag aagtttttat accagatcgt atagtaagtc
     2221 gtattatggg tgagggtgat ttggcaactt tagctgaaaa aactgctgcg attattgatg
     2281 aaaaagaggc taaaaaactc aatcaaaaaa ttaaaaaagg tgaatttaat tttaatgatt
     2341 ttcttaacca aatggaaagt attaaaaaat taggaagtat gaagtcttta atcggtatga
     2401 taccaggact tggtggaatg gcaaatgcgg taaaagatat agatttggat aattctaaag
     2461 aaatcatacg cattaaagca atgatttctt caatgactcc aaaagaaaga gaaaatcctg
     2521 atttattaaa taatgctaga aagcgtcgta tagcagaggg agcaggtctt tctcaggtag
     2581 aagtcaatcg ttttttaaaa caatttagca atgcagcaaa acttgcaaaa agattttcag
     2641 gtaaaaaagg aatggagagt ttgacacaaa tgatgagtca agctagaaga cagttttaaa
     2701 ttttatttat aaatactttt tatagtatct ataaataaaa tttttaattt ttaaggagtg
     2761 taaatgacag ttattagact tacaagaatg ggtagaacca aaagaccatt ttatcgtatt
     2821 gtagttacgg acagtagaaa acgtcgtgat ggtggttgga tagaaagtat tgggtattat
     2881 aatcctatgg tagaacctga agtaattaaa gttgatgcag agcgtttagc ttattggaaa
     2941 agcgttggtg caaaacttag cgataaagtt gcttctatca ctagcaaata atcatggtag
     3001 agaattttct tagagaatac gcaaaattaa ttgcagatta tcctgaacag attgatactc
     3061 aaaaaattga attaagtgaa aatttttttg agattgttct ttttgcacat aaggttgata
     3121 caggtaagct tataggtaaa aatggaaaaa tgatcaatgc tataaaaact gtaatctctg
     3181 cttataagag caaggatgca agttcttata gagtaacggt aaaagcactt gagtgaaaaa
     3241 gattttgttc aagttgcaaa acttggtaaa actgtgggtc ttaagggtta tgtaaaattg
     3301 cataacctga gcgacttttc ttctcaattt aaaaaagatg ctactttttt tataaaaaac
     3361 actaaagaaa tgttaaagat taagcattat aatacaagca attctactgt tttatttgaa
     3421 aattatgaag atatagaaaa ggccaaagaa ttaactaatc ttattctttt tcagagtatc
     3481 gagaaaagta gacaaacttg taaattaaaa aaagatgagt ttttttattt tgatatttta
     3541 gagtgtgaag tttttgaaga agataaaaga ttaggtaaag tggttgatat cttggaaact
     3601 ggagcttctt atttatttga aattcaaagt gatgaaaaat gggttgaaaa aaaatatcct
     3661 aaaatatttt ttattccata tttggataaa tttgttaaaa atatagatat agaaaaacga
     3721 cagatttttt gcacgcaaga tgctttttta attttagaaa attcatgaaa tttagtttcg
     3781 tttctttgtt ccctaatctt atggaatttt actttcaaga ttctatactt gcaagagcaa
     3841 aagaaaaaaa acttttcaaa cttaattttt ataatccaag agatttttct aaaaattctt
     3901 atcataaagt cgatgattat aaaataggtg gtggagctgg acttttgatg caagctgaac
     3961 ctatgtatga ggtgctaaga agtattcaag aaaaaaaaga aaatccctat tttatttttt
     4021 taaatccaag tggtaaaacc tttaatcaaa aagacgccaa acgcttaagt aaaaaagaac
     4081 atatagtttt tgtatgtggg cgctatgaag gtatagatga aagagtgctt gaaatttttg
     4141 cgaatgaagt ttttagtata ggggatttta ttttaactgg aggagaatta cctgcgcttg
     4201 taatgtgtga tgcaatttta agaaatgtta acggggtttt aggaaatatg gaaagtttgg
     4261 aagaagaaag ctttgaaaat aatttactcg aagcgcctgc tttttcaaaa ccttttattt
     4321 ttgagaaaaa aaataaaaaa ttttatactc cttcagagtt tttaaagggt aatcacgcta
     4381 gaattgcaag tttaaaaact actttggcgt cttgcaaaac gaaatttttt cgtccagatt
     4441 tatttttaga gcatgaacgc aaaaaataag ggatttttta tgaaaaataa atatatagaa
     4501 caatttgaag caaaacaaat tgaaggtaaa aatgttccag attttcgtgc tggtgatact
     4561 ttaaagcttg caattcgcat caaagaagga gataaaacaa gaatccaaaa ttttgagggt
     4621 atttgtattg ctagaagagg taatggcgta agtgaaactt ttatcgtgcg taaaattggc
     4681 gctaataatg ttggcgttga gagaattttc cctatttata gtgaaagttt agaaagtatt
     4741 actgttttgc gtcgtggtcg tgtacgccgt gcaagattat tctacttaag agatagacgc
     4801 ggtaaagcag cgcgtattaa agagcttaaa
//
LOCUS       DAPIWB010000090         4818 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.091, whole genome shotgun sequence.
ACCESSION   DAPIWB010000090 DAPIWB010000000
VERSION     DAPIWB010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4818
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.091"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..753)
                     /gene="map"
                     /locus_tag="RJ266_001560"
     CDS             complement(<1..753)
                     /gene="map"
                     /locus_tag="RJ266_001560"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HDV7355284.1"
                     /translation="MIELKKPDEIEKLRIANQIVAKTLNFLENEIKIGMSLKQIDKIA
                     EDYILSLGAKPSFKGLYGFPGAICTSLNQVCIHGIPDDKIIKEGDILGLDVGSLIDGY
                     YGDAARTIAIGEVSPADKALISCAKDALYHAIDIIRDGMRFKELSAALGEFIHARGFV
                     PLRGYCGHGIGRKPHGEPEILNYLEKGASAKSGPKIKNGMVFCIEPMICQKDGTPKHY
                     NGKWDAGSIDGLNAAHYEHCVAVINGRAEILSM"
     gene            complement(763..1506)
                     /locus_tag="RJ266_001561"
     CDS             complement(763..1506)
                     /locus_tag="RJ266_001561"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HDV7355285.1"
                     /translation="MKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDK
                     DTIIKFCLEALEFFEQFQIDMLIIACNTASAYTLDALRTKAHFPVYGVIDAGVEATIK
                     ALHDKNKEILVIATKATIKSEEYQKRLLSQGYTNINALATGLFVPMVEEGIFEGNFLQ
                     SAMEYYFKNITTPDALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLKERENID
                     LKNHKAKLHFYASSDVESLKNTAKIWLNL"
     gene            complement(1508..1966)
                     /locus_tag="RJ266_001562"
     CDS             complement(1508..1966)
                     /locus_tag="RJ266_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDV7355286.1"
                     /translation="MRHIFFIITIIFFISGCSFYQNLNYRPSYNTNKEARLKVIANEW
                     KKTPYVLGGTSKKGADCSGFTQSALAQLNIRIPRTTKTQLGSGRKVSKSKLQTGDLVF
                     FKTGRGPNGMHVGIYMSKGKFIHLSTKGGVKEVELNSSYWKARYIGARRY"
     gene            complement(1975..3144)
                     /gene="nhaA"
                     /locus_tag="RJ266_001563"
     CDS             complement(1975..3144)
                     /gene="nhaA"
                     /locus_tag="RJ266_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HDV7355287.1"
                     /translation="MNNIVHKLKTLVLNEAFGGVLLIVCTLLALLVQNGSFSEHYREF
                     LNLKVGFSVGEFELNKPFLLWINDGLISIFFFAIGLELKKEFLHGDFKNPKNIVLPFM
                     AALGGILIPAMLFALVNIGDAYTLKGWAIPTATDTAFALAILMMCGKHIPSSLKIFLL
                     SLAIFDDVGAILIIAIFYTTKLSIVAFVVAGLAILVMLILNLLGITRKSFYFICSVIL
                     WISVLKSGVHATLAGIVTAFFIPMQTKNGEAFLEEIYESLKFWIAFIILPLFAFANAG
                     VNLSNIDIGAIFSGVSIGIFLGLFVGKQVGVFLFSYLAIRFKFAALPQGSNLKQLYGV
                     CILTGIGFTMSLFIDGLAYEVSDIFNYADNLAILIASFCSGIWGFIYLKFFTTRS"
     gene            complement(3141..4289)
                     /gene="nhaA"
                     /locus_tag="RJ266_001564"
     CDS             complement(3141..4289)
                     /gene="nhaA"
                     /locus_tag="RJ266_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HDV7355288.1"
                     /translation="MQMIKKMVLSETFPGILLIFFTFLALLCKNSSLSVIYTDFFHAN
                     FTVGFDHFQISKSLDLWINDGLITIFFLCIGLELKYEILRGQLKNIRAVSLPIFGALG
                     GMITPALIFAAINYSHDFAMKGWAIPTATDIAFAVGILMLLGNKIPTSLKLFLLSLAI
                     FDDLGAIVIIALFYTDQLSALAIIICLFCIFALLLLNYYHITHLSLYVLVGVVLWIAM
                     LKSGVHATLAGVIISLFIPLDTKNKKPYLHEVLKDLNPWVVYFILPLFAFANAGIDIR
                     DMHLGSVFSPVSLGIILGLFLGKQLGVFTFCFIAIKLKLAKLPENIKYGKFYGICILT
                     GIGFTMSLFIDGLAYKNSDIFEHADKLAILIASFLSAIVGFIYLKIVK"
     gene            complement(4432..4614)
                     /locus_tag="RJ266_001565"
     CDS             complement(4432..4614)
                     /locus_tag="RJ266_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjfB family protein"
                     /protein_id="HDV7355289.1"
                     /translation="MVSDVSMGNVNLMTAVNTSVLKKSMDTNEALMNELIEGMEGVSQ
                     ASAPQASSSSGLDIYA"
BASE COUNT         1824 a          914 c          587 g         1493 t
ORIGIN      
        1 catagaaaga atttcagcac gcccattaat cacggcaaca caatgttcat aatgagccgc
       61 attaagccca tcaatacttc cagcatccca ttttccatta taatgctttg gtgttccatc
      121 tttttggcat atcataggct ctatgcaaaa caccattcca tttttaattt tagggccact
      181 ttttgcactc gcaccttttt ctaaatagtt taaaatttca ggttctccat ggggctttcg
      241 tcctatacca tgcccgcaat atccacgaag cgggacaaaa cctcttgcat ggataaattc
      301 gcctaaagca gctgaaagtt ccttaaaacg cattccatca cgaataatat ctatagcatg
      361 atataacgcg tctttagcac aagagattaa agctttatca gcgggtgaaa cttctcctat
      421 agcaatagtt cttgctgcat ccccataata cccatcaatc aaacttccca catcaagacc
      481 taaaatatca ccctctttga taattttatc atctggaatt ccatggatac aaacttgatt
      541 taaagatgtg caaatggcac ctggaaaacc ataaagtccc ttaaatgatg gcttggcgcc
      601 aaggcttaaa atataatctt ctgctatttt atcgatttgt tttaagctca ttcctatttt
      661 aatttcattc tctaaaaaat ttaaagtttt tgctacaatt tgatttgcta ttcttaattt
      721 ttctatttca tctggttttt tcaattctat cattttattt ccttataaat ttagccaaat
      781 tttagcagta ttttttaaag attcaacatc gcttgaagca taaaaatgta attttgcttt
      841 atgatttttc aaatctatat tttctctttc tttaagaaat tcaactatag catctcctga
      901 atgaattaat tttgttttat caccaaaata cttacttaaa gaacgaccta gtaaagggaa
      961 atgagtgcaa gcgagtatca aagcatctgg agttgtgata tttttaaaat aatactccat
     1021 agcactttgc aaaaaatttc cttcaaaaat accttcttca accataggca caaaaagccc
     1081 tgtagctaaa gcatttatat ttgtatatcc ttgggataat aaacgctttt ggtattcttc
     1141 tgatttaatg gttgcttttg ttgcaatgac taaaatttct ttatttttat catgcaaagc
     1201 ttttatcgtt gcttcaaccc ctgcatcaat tacaccatat actggaaaat gtgcttttgt
     1261 ccttaaagca tctaaagtat aagcactagc agtattacat gcaatgataa gcatatcaat
     1321 ttgaaattgt tcaaaaaatt ccaatgcttc aagacagaac tttataatag tatctttatc
     1381 ttttactcca taaggaactc ttgcggtatc tccataatag ataatttcat caaaaagtct
     1441 agcttcataa agagatttta aaacgctaag cccccctacc ccgctatcaa atacacctat
     1501 tttcacttta ataccttctt gctcctatat aacgagcctt ccaataagaa ctatttagct
     1561 cgacttcttt tactccacct ttagtagata aatgtataaa ttttcccttg ctcatataaa
     1621 taccaacatg cataccattt ggccctctac ctgtcttaaa aaataccaaa tctcctgttt
     1681 gcaattttga tttagaaact tttcttccag aacctaattg agtttttgta gtgcgaggta
     1741 tgcgtatatt aagctgagct aatgcgctct gtgtaaatcc tgaacaatca gcaccttttt
     1801 tactagttcc acctaaaaca taaggggttt ttttccattc atttgcaata accttgagcc
     1861 ttgcttcttt atttgtgttg taactaggac gatagtttag attctgataa aaactacatc
     1921 cacttataaa aaatataatc gtaataataa aaaaaatatg cctcatcaat ccccttaaga
     1981 tcgagtagta aagaatttaa gataaataaa accccaaatc ccagaacaaa atgaggctat
     2041 aagaatagct aagttatctg cataattaaa aatatcacta acttcatacg ccaatccatc
     2101 aataaacaaa ctcattgtaa aaccaattcc tgtaagtatg caaaccccat aaagttgttt
     2161 caaatttgaa ccttggggca aagctgcaaa tttaaagcgg attgccaaat aagaaaataa
     2221 aaatacaccc acttgtttac ccacaaaaag ccctaagaaa atacctatac ttacacctga
     2281 aaaaattgct cctatatcga tattggataa atttacccca gcgttagcaa aagcaaataa
     2341 aggtaaaata ataaaagcaa tccaaaattt taagctttca taaatttctt ctaaaaatgc
     2401 ttccccattt ttagtttgca tcggtataaa aaatgctgtt acaattccag ctaaagttgc
     2461 atgtactcca ctttttaaaa cactaatcca aagaataact gagcaaataa aataaaaaga
     2521 ctttcttgtt atccctaaaa gatttaaaat aagcattacc aaaatagcaa gtcctgcaac
     2581 gacaaaagca actattgata attttgtcgt ataaaaaata gctataatta aaatagcacc
     2641 cacatcatca aaaatagcca aagaaagtaa gaaaattttt aaacttgatg gaatgtgctt
     2701 gccacacatc attaaaatcg ctaaggcaaa cgctgtatct gtggctgtag gtatagccca
     2761 accttttaaa gtataagcat ctcctatatt taccaaagca aacaacatcg caggtataag
     2821 tataccccct aaagcagcca taaaaggtaa aacaatattt ttaggatttt taaaatcccc
     2881 atgcaaaaat tcctttttaa gctcaagccc tatagcaaag aaaaatatag atataagccc
     2941 atcatttatc caaagtaaaa aaggcttatt aagctcaaat tcacctacac taaatccgac
     3001 ttttaaattt agaaattctc gataatgttc gctaaaagat ccattttgca caagcaaagc
     3061 aagcaaagta caaactataa gtaaaacacc accaaaagcc tcgtttaaaa ctaaagtttt
     3121 taatttatgt actatattat tcatttaaca atcttaagat aaataaaacc aacaatggca
     3181 cttaaaaaac tagctattaa aatagcaagt ttatccgcat gttcaaaaat atcactattt
     3241 ttataagcca aaccatcaat aaacaaactc atcgtaaaac caatgcctgt taaaatacat
     3301 ataccataaa attttccata tttaatattt tcaggtagtt ttgcaagctt aagtttgata
     3361 gcaataaaac aaaaagtaaa aacacctagt tgctttccta aaaataatcc tagaataatt
     3421 ccaaggctta caggcgaaaa taccgaacca agatgcatat ctcggatatc aatcccagca
     3481 ttagcaaaag caaataaagg caagataaaa taaaccaccc aaggatttaa atccttaaga
     3541 acttcatgca aataaggttt tttatttttt gtatcaagcg gtataaataa agaaataatc
     3601 acaccagcca aagtcgcatg tactccactt ttaagcatag ctatccacaa tacaacacct
     3661 actaacacat acaaagaaag atgggtgatg tgataataat ttaacaaaag cagagcaaat
     3721 atacaaaaca aacaaataat aatcgccaaa gctgaaagct gatctgtata aaataaagca
     3781 ataataacaa tagcgcccaa atcatcaaaa atagctaaag aaagtaaaaa aagctttaaa
     3841 cttgtaggaa ttttatttcc taaaagcatc aaaataccca ctgcaaaagc tatatcggtt
     3901 gccgtaggta ttgcccaacc tttcatagca aagtcatgag aataattaat agcagcaaaa
     3961 attaaagcag gagtaatcat accccccaaa gctccaaata taggtaaaga tacagctctt
     4021 atatttttaa gctgtccgcg taaaatttca tattttaact caagccctat acatagaaaa
     4081 aatatagtta tcaaaccatc atttatccat aaatccaacg actttgaaat ttgaaaatga
     4141 tcaaatccta ctgtaaaatt agcatgaaaa aaatctgtat aaataacact taaagaagaa
     4201 tttttacata ataaggctaa aaatgtaaaa aatataagca aaataccagg gaaagtttca
     4261 cttaaaacca tcttctttat catttgcatc cttgctccta agtaaatatt tgtaaaaatt
     4321 taatacgata aataaaatgg taaaattata acgaaaaaat actaaagaaa taattattta
     4381 aaaaaacaag cccaagatac caaaaagttc ttaagcttgt tcttaagata tttaagcgta
     4441 aatatccaaa ccactagagc tagacgcttg tggagcggag gcttgagaga caccttccat
     4501 accttcgatg agttcattca tcaatgcctc gtttgtgtcc atagattttt tcaaaactga
     4561 agtattaaca gcagtcatta aattaacatt acccatagaa acatctgaaa ccatacatcc
     4621 tccttttaga ttgagtctta agactttatt taaatcggat gatattttta aaacttaata
     4681 ttttttacta aactttttaa aatttttcaa gggaaccaat atctgaaatt aaaaatcata
     4741 aattttttaa gataaaatcc tattttaaaa atttttacac tatgaaacaa taagcaaaat
     4801 ataaatgatt gatgcttt
//
LOCUS       DAPIWB010000091         4464 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.092, whole genome shotgun sequence.
ACCESSION   DAPIWB010000091 DAPIWB010000000
VERSION     DAPIWB010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4464)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4464)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4464
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.092"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            39..263
                     /locus_tag="RJ266_001566"
     CDS             39..263
                     /locus_tag="RJ266_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012001260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV7355290.1"
                     /translation="MKLSQIIHKIHKLIEAKELKNITKREMANRLGISERTYIEWLRE
                     TNEPIAMKAVLDMLSQLKDDDVIQVVREWK"
     gene            290..1306
                     /locus_tag="RJ266_001567"
     CDS             290..1306
                     /locus_tag="RJ266_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001210996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HDV7355291.1"
                     /translation="MRYIGSKILLLDKISNFIPKNTQTLCDIFAGTASIGKYFKKSYN
                     LISNDILYFSFILQKAYLQLYEEPKFSKFIAYFNDHPIDYFNKKTSSYNFLDKPFIYE
                     NYSPNENCQRTYFSVENALKIDYIRQSIEQFLKDEIINQGEYYYLLASLIEAVSLVSN
                     TTGTYGAYLKIWDKRSLKPLTLSLLDIDFYKKTNNLCFNENSNSLIDKISGDVLYIDP
                     PYNSRQYAPNYHILETIARYDYPKISGVTGVRDYTSLKSNFCIKAKARLELDNLVNRA
                     DFKHIILSYNSEGIISEMDIENTLKKYGKETTYKCEKIPYRRYKSNKEAKNDVNELLF
                     YIEK"
     gene            1322..2470
                     /locus_tag="RJ266_001568"
     CDS             1322..2470
                     /locus_tag="RJ266_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001049131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HDV7355292.1"
                     /translation="MFYNYIDEKFITNLLKKKKIENCNKILSEIEKSVKDIVAIKIKE
                     YQNKNRIKKNDETKIKYRAIEVLSKEQIKTLPSWVKDDIEKAYVLGESKNVVITSDGK
                     KYSLQNKLNDLSGGEWTYFLNSVISTKYLTNGDDSYAHHIRKIHPSPKPPQLMRDIIK
                     FFTKENELVFDFFAGVGGTLLGASLCNRKAVGIDLNQKYINAYQEANKYLNLEEQIFI
                     CGDSLKILKDEKQINKIFNNNKASLILIDPPYGDMMAKNKTGEAMKKGKDISPTPFTN
                     MEVDLGNMDWDKFILNFKESVKDSLKFLKEKGHVVVFIKDMQPNKENANLLHADVINE
                     LNSLNNLKYLGVKIWADLNVNLYPYGYPFAFVANQIHQYIMVFRKEKA"
     gene            2467..3915
                     /locus_tag="RJ266_001569"
     CDS             2467..3915
                     /locus_tag="RJ266_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001202746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355293.1"
                     /translation="MKSSNLWILTEERPKRDVLFNIIKKFADDNGISFFVEQNLFIVP
                     VLNINGDFSFGYKILGVHSAVIKNVFLFVVSGNSSFMDFLIFYQDNIPNPLQDIPLYA
                     IEETKTSDYESRNTGVFQRASKFVFIDLYYKDIKKIMLYSIRIGQDKNPTLTNKFGSK
                     CLATLGVQILGKSLDDCAISPFDSIDDLINFKNTMRQPSRGNIPIKISKSENKITISG
                     RLEKDGSLSHDPNIGALSLISATLRALGYVGKIEITSHNLSQNQIGRGNKFISIANLL
                     GISLENIDLPAIQNNDSYWHYEMQGEKIATIFLHLVIEEFTRARAIYENHAGCERGYF
                     ITQDNKNLTVEKYKNKDEYKNGNKNARIFIPDLVLADFDRKQIINIEGKKFIKVQCGI
                     DELENYDAFENLYIKKHYEDYEIIRTVVLFGGEIDEISNLSFPKINFNDIPKIGFVLT
                     KNGKTILQIHSPKIFGEAIFHLRAYYGLNKSG"
     gene            complement(4107..4430)
                     /locus_tag="RJ266_001570"
     CDS             complement(4107..4430)
                     /locus_tag="RJ266_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355294.1"
                     /translation="MAYPLLGTRIVLDEEKILKEGKYNLEDMYKMIDEYAKESGMIKI
                     DKETYHCKGDKYDLGCMTLFIYKYLIDSEWFTKNAKEWIWISEKEGNSDLISASKAEG
                     EGIWE"
BASE COUNT         1774 a          544 c          681 g         1465 t
ORIGIN      
        1 atttataatg tacaatatca cactagaaaa ggaaaaatat gaaactatca caaataattc
       61 ataaaattca taaactaatt gaagcaaaag agttaaaaaa tattaccaaa agagagatgg
      121 caaataggct aggcatatca gagcgaacct atatagagtg gcttagagaa acaaatgagc
      181 ctatcgctat gaaagcagtg cttgatatgt tatcgcaact aaaagatgat gatgtaattc
      241 aggttgttag agagtggaaa taaggaataa aaattaagag tggtgtttaa tgagatatat
      301 aggttcaaaa atacttttgt tagacaaaat atctaatttt attccaaaaa acacacagac
      361 cttatgtgat atttttgcag gaactgccag tattggtaaa tattttaaaa aaagctacaa
      421 tttaatatca aatgatatat tatatttttc tttcatattg caaaaggctt acttgcaatt
      481 atatgaagag ccaaaatttt caaaatttat agcttatttt aatgaccacc ccattgacta
      541 ctttaataag aaaactagct cttacaattt tttagataag ccatttatat atgaaaatta
      601 ttcgccaaat gaaaattgtc aaaggacata ttttagcgtt gaaaatgctt taaaaattga
      661 ttatattaga caatcaatag agcaattttt aaaagatgaa ataataaatc aaggcgaata
      721 ttattattta cttgcttcgc ttattgaagc tgtttcattg gtttcaaaca caacaggaac
      781 ttatggtgca tatcttaaaa tttgggataa gcgtagtcta aaaccattaa cgctgtcttt
      841 attagatata gatttttaca aaaaaacaaa caatttatgt tttaatgaaa atagtaattc
      901 cttaatagat aaaataagtg gcgatgtcct atacatagac ccaccctaca attcaagaca
      961 atacgcacca aattatcata ttttagaaac tattgctaga tatgattatc ctaaaataag
     1021 tggtgttaca ggtgtgcgag attatacgag tttaaaatcc aatttttgta taaaagcaaa
     1081 agctagattg gagttagata atttggtcaa tagggctgac tttaaacaca taatattaag
     1141 ctataacagt gagggtatta taagtgagat ggatatagag aatacattaa aaaagtatgg
     1201 caaagagaca acttataagt gcgaaaaaat accatataga cgatataaaa gcaataaaga
     1261 agcaaaaaat gatgtcaatg aattactttt ttacattgag aaataaacat gaaggtataa
     1321 gatgttttat aactacatag atgaaaaatt tattacaaat cttttaaaaa agaaaaagat
     1381 tgaaaattgc aataaaattt taagtgaaat tgagaaatcg gtaaaagata ttgttgcaat
     1441 aaaaataaaa gaatatcaaa ataaaaatag aattaaaaaa aatgatgaaa caaaaataaa
     1501 atatagagca atagaagttc taagcaaaga acaaatcaag acactcccaa gttgggtaaa
     1561 agatgatata gaaaaagctt atgttctagg cgaaagtaaa aatgtagtta taacaagcga
     1621 tggtaaaaaa tatagcttac aaaataaatt aaacgacctt agtggtggcg aatggactta
     1681 tttcttaaat tcagtaatct caacaaaata tttaacaaat ggcgatgata gttatgccca
     1741 tcatataaga aaaatacacc catcaccaaa accaccacag ttaatgagag atataattaa
     1801 gttttttaca aaagaaaatg aacttgtttt tgattttttt gcaggtgtgg gtggaacatt
     1861 gcttggagct agcctatgca atagaaaagc tgttggaatt gatttgaacc aaaaatatat
     1921 caacgcatat caagaagcaa ataaatatct taatttagaa gagcaaatat ttatttgtgg
     1981 agatagttta aaaattttaa aagatgaaaa acagataaat aaaattttta ataacaataa
     2041 agcttcgtta atattgattg acccgcctta tggcgatatg atggctaaaa ataaaactgg
     2101 tgaagctatg aaaaaaggca aggatatttc cccaacaccc tttactaata tggaagtgga
     2161 tttaggaaat atggattggg acaaatttat attgaatttt aaggaaagtg taaaagatag
     2221 tttaaaattt ttgaaagaaa aaggacatgt tgttgttttt ataaaagata tgcaaccaaa
     2281 caaagaaaac gcaaatttac ttcacgcaga tgtgataaat gaattaaatt ctctaaataa
     2341 ccttaaatat ttaggagtta aaatttgggc agatttaaat gtaaatctat atccttatgg
     2401 ctatccattt gcattcgttg caaatcaaat tcatcaatat attatggttt tcagaaagga
     2461 aaaagcgtga aaagtagtaa tttatggata ttaacagaag aaagaccaaa acgagatgtg
     2521 ttgtttaaca taattaagaa atttgctgat gataatggaa tttctttttt tgtagaacaa
     2581 aatctattta ttgtgcctgt tttaaatata aatggagatt tcagctttgg atataaaata
     2641 ttaggagttc attctgctgt tataaaaaat gtatttttat ttgtagtatc tggaaattct
     2701 agctttatgg attttttaat tttttaccaa gataatatac ctaatccctt gcaagatata
     2761 ccgctttatg ctattgagga aacaaaaacg agcgattatg agagtagaaa tacaggtgtt
     2821 tttcaaagag cttctaagtt tgtgtttatt gatttgtatt ataaagatat taaaaaaata
     2881 atgctctatt ccataaggat aggtcaagat aaaaatccaa cgcttacaaa caaatttggc
     2941 tcaaaatgct tagcaacact tggtgttcaa attttaggaa agtcattaga tgattgtgca
     3001 atatcgccat ttgatagtat tgatgatctc ataaatttta aaaatactat gagacaaccg
     3061 tcaagaggta atatacctat taaaattagc aaatcagaaa ataaaatcac aatttcaggt
     3121 aggttggaaa aagatggttc attgtctcat gaccctaata taggtgcttt aagtttaata
     3181 tcggctacac ttagagcttt gggttatgtg ggtaaaatag aaataacttc gcacaatctt
     3241 tcacaaaatc aaattggcag aggtaataag tttatttcaa tagcaaattt gcttggtatt
     3301 tcgctagaga acattgattt gccagcaata caaaacaacg atagttattg gcactatgaa
     3361 atgcaaggtg aaaaaatagc tacaatattt ttgcatttag ttatagagga atttacaaga
     3421 gcaagagcta tatatgaaaa tcacgcaggt tgcgaaaggg gttattttat aactcaagat
     3481 aataaaaatt taactgttga aaaatataaa aataaagatg aatacaaaaa tggtaataaa
     3541 aatgcaagaa tttttatacc tgatttggta ttggcagatt ttgataggaa acagataata
     3601 aatattgaag gcaaaaaatt cataaaagtt caatgcggta tagatgagct agaaaactat
     3661 gatgcttttg aaaatttata catcaaaaag cattatgaag attatgaaat tataagaaca
     3721 gttgtattat ttggtggaga aattgatgaa atatcaaatt tgagttttcc taagataaac
     3781 tttaatgata taccaaaaat aggctttgtt ctaacaaaaa atggcaagac aattttacaa
     3841 atacactctc caaaaatttt tggagaagcg atttttcatt tgcgtgcata ttatggatta
     3901 aataagtcag gttaattttt aggtgcgttt gctacataat atcgcaaaag aattataaat
     3961 tttctctttt tggtttcttt ttactatctt tttaattttg taaaaagata gtaaatatct
     4021 attttattga tactgatcaa ggctataaaa aactcttttt aaaaatattt atttgtgtga
     4081 atcaaaatta attgctttgt gattatttat tcccaaattc cttctccttc agctttgctt
     4141 gcagaaatca aatcgctatt tccttctttt tcactaatcc aaatccattc ttttgcattt
     4201 tttgtaaacc attcagaatc aatcaaatat ttatatataa ataaagtcat acaacccaaa
     4261 tcatacttat cccctttaca atgataagtt tctttgtcta tttttatcat tcctgattct
     4321 ttagcatatt cgtctatcat tttatacata tcttctaaat tatatttgcc ttcttttaaa
     4381 attttttctt catctaaaac tattcttgtg cctaaaagtg ggtatgccat tttttatcct
     4441 ttcatcaaaa atctaacaaa ttct
//
LOCUS       DAPIWB010000092         4284 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.093, whole genome shotgun sequence.
ACCESSION   DAPIWB010000092 DAPIWB010000000
VERSION     DAPIWB010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4284)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4284)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4284
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.093"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            28..3803
                     /locus_tag="RJ266_001571"
                     /pseudo
     CDS             28..3803
                     /locus_tag="RJ266_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343503.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
     gene            3803..>4284
                     /locus_tag="RJ266_001572"
     CDS             3803..>4284
                     /locus_tag="RJ266_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002928619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355295.1"
                     /translation="MKRNIYEIELEIPNSGIFIMSLENENLIISLNVVKFIEINAEKI
                     ATLDGKLDAGELAKPLNPYIIYKTLEENHKNNFNGVKIIDKIEEENNIVYYFNFGLTL
                     NTFIEQIKENIDETLLKKINKMKNFISFCCFSCEIAGDTTSISLSELENLKNSYGYEG
                     "
BASE COUNT         1733 a          584 c          671 g         1296 t
ORIGIN      
        1 acaaaatatt ttttataaag gttaaaaatg catttcactt tgctaaatga aaaagatttt
       61 ttcaacccat actaccgcaa aaagcaaatc atgcaaaatg aatttgatat atttaacaag
      121 gctttaatgc aatatctaga aagacttgaa agttcgcaaa gtgaaaatga agattatctt
      181 gtagctaatg cacttagtcc atttttaacc atgttaaatt tcaaaactca catcaaaacc
      241 aagcaaaaag gcaaaagtga gattgactta tccatctcta aagatgagtt tagtaaagac
      301 ttagaagttc ttattgaggc taaaaagcca aattcaaaag aatttatcac tcatacaaag
      361 gtaaattcta aagccttaca cgagactatt ttatattatt ttagaaatag agagtatagt
      421 tttagcttaa aatttattat catcacagat ttttataaat tttacatttt taaaattagt
      481 gagtttgaag agctttttta taaaaatcca agttttaaaa aactttttga agaattttgc
      541 aacccaaatt cacttttcaa aggcaatacc gaagagtttt ataaagaagt agctaaactc
      601 atagaaaatt ccaaagaaaa tttaaaaggc tttttgattg acttgacatt tttaaaagac
      661 aaacaaaaat caaattttaa aaagctagca agtatttata aaacttttca tagagacttt
      721 ttgttaagtg agtttaaccc caacgatgca aattcactca acaacgcttt ttacaaagaa
      781 cttttataca tcttagggct ttgcgaaagt aaacaaaact caaaactcat catcgcaaaa
      841 agcgaagaaa gcaaagaaga gcaaggaact ttctacaccg ctataaactc taagcttaaa
      901 gaagaaaatt ttgaaaccat cttaaaactt ttgatcttat ggcttaatcg cattttgttt
      961 ttaaagctta tagagtcaaa tttggtgcgt tttaatgatg ataaaaattt gaaattttta
     1021 aatttcaaaa aaatccctga ttttgacaag cttagcgaac ttttctttga agttttagcc
     1081 aaagaaaaaa gcacaagaaa gaaaagcgaa tttgcctatc tgccttatct aaattcttct
     1141 ttgtttgaaa aacaaagcat agaaaacaca cttgaaattt caagcttaag caatgattta
     1201 aagctttttt actataaaaa caccgtgcta aaagatgata aatgcaaggc taaaaaagga
     1261 caagtggggc ttttggaata cttgtttgaa tttttggata gctttgattt tggtagcgat
     1321 gatgagcaaa gcgaaatttt aagccaaaaa gaactcataa gttcaagtgt tttaggaaat
     1381 gtgtttgaaa aactcaatgg ctacaaagaa ggaagctttt acacgccaag ctttatcact
     1441 tcttatatgt gtaaagaaag catcacaaaa gttgtgcttg ataaattcaa cgctcaattt
     1501 gatcttgatg ctaaagatat aagcgaacta agaaagtctt taagaaaaga agacaaaaaa
     1561 gcacaaaaag agcttttaaa ttccataaaa atttgcgatc ctgcggtggg aagtgggcat
     1621 tttttggttt ctgctttaaa tgttatgctg agtatctatg atgagctaaa tctttttgat
     1681 gaagagtttt acctagaagt gcaaaacgat gaaattctca tcacgggtag aaaaggcgag
     1741 tttatagagt ataaacgccc aaaaacacct aaagataaag cccatcttat ccagcaagaa
     1801 ctttttcaca ctaaaaaaga catcatagaa aacaaccttt ttggagtcga tatcaaccct
     1861 aactcatgcg agatcaccaa gttaaggctt tggatagagc ttttaaaaca tagtttttat
     1921 caaagctttg atgatgggaa ttatcacgat cttaaaacat tgccaaatat cgatataaac
     1981 ataaaatgcg gaaattcttt agtatcttac tttgaaacag gcaaaagcct aaaccactat
     2041 cctaacatca aagaacgtat gagcaaatac aaacgcatag taaaagacta taaagagggc
     2101 ttttacacag ataaaagcca catcaaccaa gagataaaaa atctcaaaat ttcttttaaa
     2161 aatttctgct ttgcagataa atttaaaaaa gaaatgaaaa gctttaacga taaatgtgaa
     2221 aaatactcta aaaaatacgg aaatttctta gccatagatg atgaaaattt gaaattcttt
     2281 gttagtgcga atttgactct ttttgacttt gatgaaaaag aagccacaaa agaatttgca
     2341 aatcttaaaa aagaatacga caatatcttt aacctagaaa gcaatcatcc ttttgaatgg
     2401 cgttttgaat tccctgaaat tttggacgat gatggaaatt tcaaaggctt tgatctcatc
     2461 atcggcaatc cgccttatat aagacaagag gaacttaaag aactcaagcc ccatttagct
     2521 aaaaattata aggtttataa aggcacgagt gatatttata cttattttta tgaactagga
     2581 tttaatgttt taaaagatag gggggggtat tgagctatat cacttctaac aaatacacgc
     2641 gtgcaggata tggggaagct ttgcgtgaat ttttacttaa aaatgttaag tttttagaat
     2701 acactgattt aaacggcata aaagtttttg atagtgctac ggtagatact tccatacttt
     2761 gttttgaaaa atcaaaaagc aaagataata aattcaaata ccttgcccta agcaatgaaa
     2821 ttttaaaaac ttgtgcttat gacattggct tatataagga ctttgcagaa ttttcgcaaa
     2881 attctttaag caaagaaagc ttcactttta gcgatgagaa tactagtgct ttaaaggcta
     2941 agatagaacg cataggaact ccgcttaaag aatggtatgg gcttaatatc aactatggga
     3001 taaaaacagg ctataacgaa gcctttatca tcaccactga aaaaagaaat gaaattttag
     3061 caaattgcaa agatgaagcc gaaaaagaac gcaccgctaa actcatacgc aaaatgctac
     3121 gcggacgcga tataaaaaga tatagttacg agtgggcggg actttgggtg atatttatac
     3181 cttggcattt tccaaatgtt gaaaaaccaa agacaatgct agaaaatgaa caagatttaa
     3241 aagaacaata tccgagctta tataagcact tgttatctca taaagaaaga ttatctaaaa
     3301 gaaataaaga agaaacagga attcgttatg aatggtattg tttgcaaaga tggggagcaa
     3361 attattatca agaatttgaa aaagaaaaga tagtgtatag cgaaattgta agaaagccac
     3421 aattttattt agatgtaaat ttaaattttt atgcagaagc tacaagtttt attttaacag
     3481 gtgaaaattt aaaatatctt attgcctttt taaataatga ctttgttgct ttcatcttta
     3541 aaacatttta tgcaggtgga aatttaggag aaaatggttt tagatataaa aaagcatttt
     3601 tagaaaaact tcctatacca aaaataaatt ctaaaaatca aaaattagca aatgagcttg
     3661 taaatttagt tgatgaaatt ttaaaagcca aagagcaaga caaaaacgca aatacccaag
     3721 aactagaaaa caaaatcaat tctttggttt ataaacttta caatctcacc gaagaagaaa
     3781 taaaaatcat agaagggaaa taatgaaaag aaatatatat gaaatcgaac tagagatacc
     3841 aaatagcggt atttttataa tgagtttgga aaatgaaaat ttaattattt ctttaaatgt
     3901 tgtgaaattt atagaaatca atgcagaaaa aattgcaact ttagatggaa agttagatgc
     3961 tggagaattg gctaaaccat taaatccgta tattatctat aaaactttag aagaaaatca
     4021 taaaaataat tttaatggcg ttaaaattat agacaaaata gaagaagaaa ataacattgt
     4081 ttattatttt aatttcggat taacattaaa cacttttata gaacaaataa aagaaaatat
     4141 agatgaaact ttattaaaaa aaataaataa aatgaaaaat tttatatcat tttgttgttt
     4201 ttcttgtgaa atagcaggag atactacttc aatttcccta agtgaacttg aaaatttaaa
     4261 aaatagttat ggctatgaag gaaa
//
LOCUS       DAPIWB010000093         4214 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.094, whole genome shotgun sequence.
ACCESSION   DAPIWB010000093 DAPIWB010000000
VERSION     DAPIWB010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4214)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4214)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4214
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.094"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            205..780
                     /locus_tag="RJ266_001573"
     CDS             205..780
                     /locus_tag="RJ266_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HDV7355296.1"
                     /translation="MKKIFISFVVLATCLWAKNTAYTDEVVSLYLNKDDTKVIGRLLP
                     TNPFEVLKSENNKVLLKIDGYVNPKAPSVIYFNDSQRIIVAAFSKNTKLNFSQRVAGK
                     DGKWDKVSLEIWADKKEFAKDNKEMLNRAKELFVNNCGICHAIHKEKEFTANAWPAIF
                     RSMADRTGIDKKDRWLVIEYLQKNAKDFKTK"
     gene            791..3307
                     /locus_tag="RJ266_001574"
     CDS             791..3307
                     /locus_tag="RJ266_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin guanine dinucleotide-containing
                     S/N-oxide reductase"
                     /protein_id="HDV7355297.1"
                     /translation="MLDRRKFLKIGASLSALPLIPSLSAGKTVEASKVSLGLVKNGEV
                     ITAAHWGILKLTIKDGKIVKSEPWEKVTKMDNPLQHYTADMVYKSRVKYPYVRKSYLE
                     NPDNPKPELRGKDEFVRVSYDEAIKLIAKELKKTRDSKGASAIFGGSYGWKSSGNMQN
                     SRILLHRFLNVTGGFVGATGDYSTGASQVIMPYVVGSIEVYEQQTSWENILSDSKYVV
                     IWGADPLSTLRIAWTSNEQRGLAYFEKLKNSKIKVICIDPVKTTTAKFLNAKWIAPRP
                     NTDVALMMGMASHLIAKKKVNYEFLDTYTTGFDKFKDYLEGKEDGVKKDTKWASKICG
                     IDEKTIKNLAETFYDNPTMIMSGWGMQRAHHGEQPHWMLVTLCAMLGQIGTKGGGFGL
                     SYHYSNGGVPTCKGGVIGGMTAGSLGIWKNGKFKGLSKAEASSEGAEWLQNAASYSFP
                     VARIADALLHPGKTIDHNGAKITYPDIDFIYWVGGNPLVHHQDTNTNVKAWRKPRTVV
                     VNEIYWTPTAKMADIIMPVTSSYERDDITMTGDYSNMHIAPMKQAVEPVGESKDDYVI
                     FSDICKIYGKDVFNAYTENGKKAKDFIKEYYNSALKQTQSFGEAFATPMPSFEEFWAK
                     NEPITFEPTAESLEWTRFSEFIEDPILNALGTDSGLIEIYSETIKNYNYDDCKAHPTW
                     FEPIEWLGNASKEAPFHLLTNHPRDRLHSQLCHTSLRDTYAIKDREPILINSKDAKKL
                     GIKNGDVVRVFNKRGEVLAGAVVSDEIMQGVVRLCEGAWYDPNENGLCKCGNANVLTM
                     DIPTSKLANGNISHTGLVNIEKFKGELPKLTAFSAPKGAN"
     gene            complement(3331..4206)
                     /gene="zupT"
                     /locus_tag="RJ266_001575"
     CDS             complement(3331..4206)
                     /gene="zupT"
                     /locus_tag="RJ266_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HDV7355298.1"
                     /translation="MQFTFEQIFIAMLLTLFAGFSTAIGSIIAFFSRKDDLRVLSLGL
                     GFSAGVMIYISFMEILPTALKDFKNHYDSHWAELLGLACFFGGILISLLIDKLIPEDV
                     NPHEPKEDLSELKICPLPQKGQNPPKFHPGEKLHQINTKALKRTGIFTALAIAIHNFP
                     EGFATFISSLDNLTLGIAIAIAVAIHNIPEGLAVSLPIYHATGDKKKAFIYSALSGFA
                     EPLGAFVGALILLPFIGDLTLAISFAVIAGIMVFISLDELLPAAKTYDKAHDSLYGLI
                     AGMMIMALSLNLLGQ"
BASE COUNT         1555 a          701 c          771 g         1187 t
ORIGIN      
        1 aacaaacttt ttttataatt gaagttttat cttttctaaa aaacaataag taaaatataa
       61 ttaactcaaa ttcattatat caataaagaa taatattaaa gcaccaaaaa taagtaatct
      121 tagtaaaaat tatacaatta agtaataatt aaattgcata atattaaaat acatttacat
      181 caaatttata ttaaggaatt agtgatgaaa aaaattttca tttcttttgt tgtcctagcg
      241 acatgtttat gggcaaaaaa taccgcctat actgatgaag ttgtatcgct ttatcttaac
      301 aaagatgata ctaaagttat aggaagactt ttacctacaa atccttttga agtcttaaag
      361 tctgagaaca ataaggtttt actaaaaatc gatggttatg taaatcctaa agcaccttct
      421 gtgatttatt tcaatgactc tcaaagaatt attgttgcag ctttttccaa aaacacaaaa
      481 ttaaatttct ctcaaagagt agctggaaaa gatggaaaat gggataaagt aagccttgaa
      541 atttgggcag ataaaaaaga atttgccaaa gacaataaag aaatgctaaa tcgtgccaaa
      601 gagctttttg taaataactg cggaatttgc cacgctatcc acaaagaaaa agaatttaca
      661 gctaacgctt ggcctgcaat tttccgttct atggctgata gaacaggtat tgataaaaaa
      721 gacagatggc tagttataga atacttacaa aaaaacgcaa aagattttaa aacaaaataa
      781 ggagaaaagc atgctagata gaagaaaatt tttaaaaatt ggagcaagct taagtgcttt
      841 acctctcatt ccaagcttaa gtgcaggaaa aaccgtagaa gcttcaaaag ttagcctcgg
      901 acttgtaaaa aatggagaag tgatcaccgc agcacactgg gggattttaa aactcactat
      961 aaaagatggc aaaatagtaa aaagcgaacc ttgggaaaaa gttacaaaaa tggataatcc
     1021 tttacagcac tacactgctg atatggttta taaatctcgt gtgaaatacc cttatgtgcg
     1081 taaatcctac cttgaaaatc ctgacaatcc taaacctgaa cttcgtggta aagatgagtt
     1141 tgttcgcgta agttatgatg aagcgatcaa acttatcgcc aaagaactta aaaaaacaag
     1201 agatagcaaa ggtgcaagtg caatttttgg tggaagttat ggctggaaat caagtggaaa
     1261 tatgcaaaac tcacgcatct tgcttcatag atttttaaat gtaacaggtg gatttgtagg
     1321 agctacaggg gactattcta caggagcttc tcaagtgatt atgccttatg ttgtaggatc
     1381 gattgaagtt tatgagcaac aaacctcatg ggaaaatatc ttaagcgatt ctaaatatgt
     1441 tgtgatttgg ggtgctgatc cgctttctac tttacgcata gcttggactt caaacgaaca
     1501 aagagggttg gcgtattttg aaaaacttaa aaacagtaaa atcaaagtga tttgtataga
     1561 tcctgtaaaa accactacag cgaaattttt aaatgccaaa tggatagctc cacgcccaaa
     1621 taccgatgtg gctttaatga tgggtatggc aagccattta atcgctaaga aaaaagtcaa
     1681 ttacgagttt ttagacactt acaccactgg ctttgataaa tttaaagact atttagaagg
     1741 caaagaagat ggagttaaaa aagataccaa atgggcaagt aaaatttgtg gtatcgatga
     1801 aaaaactatc aaaaatttag ctgaaacttt ttatgataat cctactatga ttatgagtgg
     1861 ttggggtatg caaagagcac atcatggaga acagcctcac tggatgctag ttactctttg
     1921 tgcgatgtta ggacaaatcg gcacaaaagg aggtggtttt ggactaagct accattatag
     1981 caatggcggt gttccaactt gcaaaggcgg agtgatcggt ggtatgacag caggtagctt
     2041 aggaatttgg aaaaatggta aatttaaagg cttaagcaaa gcagaagctt caagcgaagg
     2101 tgcagaatgg cttcaaaatg cagcgagtta ttctttccct gtagcaagaa tcgctgatgc
     2161 tttacttcat cctggaaaaa ccatagatca taatggtgct aaaatcactt atcctgatat
     2221 tgattttatc tactgggtag gtggaaatcc tttagtgcat catcaagata ccaacactaa
     2281 tgtaaaagca tggagaaaac cacgcaccgt tgtggtaaat gaaatttact ggactccaac
     2341 agctaaaatg gcagatatta tcatgcctgt aacttcatct tacgaaagag atgatattac
     2401 catgacagga gattattcaa atatgcatat agctcctatg aaacaagccg ttgagcctgt
     2461 gggtgagagc aaagatgatt atgtaatttt ctctgatatt tgcaaaattt atggaaaaga
     2521 tgtctttaat gcctacacag aaaatggcaa aaaagctaaa gatttcatca aagaatacta
     2581 caacagcgcc ctaaaacaaa ctcaaagttt tggtgaagct tttgctactc ctatgccaag
     2641 ttttgaagaa ttttgggcta aaaatgaacc aatcactttt gaaccaacag ctgaaagttt
     2701 agaatggact cgtttttcag aatttataga agatcctatc ttaaatgctc tgggtacaga
     2761 ttcaggactc attgaaattt actcagaaac gattaaaaat tataattatg atgattgcaa
     2821 agcccaccct acttggtttg agcctattga atggcttgga aatgcaagca aagaagcacc
     2881 tttccactta cttacaaatc acccaagaga tcgcttgcac tctcaacttt gccacacaag
     2941 cttaagagat acttatgcaa taaaagatag agagccaatt ttaatcaatt ccaaagatgc
     3001 aaaaaaactt ggtataaaaa atggcgatgt agtgcgtgtg tttaataaac gcggtgaagt
     3061 tttagcaggg gcagttgtaa gtgatgaaat catgcaaggg gttgtaagac tttgcgaagg
     3121 tgcttggtac gatcctaatg aaaacggact ttgcaaatgt ggaaatgcaa atgttttaac
     3181 catggatata ccaacttcaa aacttgccaa tggcaatatc tctcacacag ggctcgtaaa
     3241 catagaaaaa tttaaaggtg aattaccaaa acttactgcc tttagcgccc caaaaggtgc
     3301 gaactaaatt taagaaagcc gcaaggcttt ctattgtcca agtaaattta aacttaaagc
     3361 cattatcatc attcctgcga taagtccata taaactatca tgagccttat cataagtttt
     3421 tgcagcgggc aaaagctcat caagagatat aaaaaccata attcctgcaa tcacagcaaa
     3481 acttatagct aaagtaagat cgcctataaa aggcaataaa atcaaagctc caacaaaagc
     3541 acccaaaggc tctgcaaaac ccgaaagagc tgaataaata aaagcttttt tcttatctcc
     3601 tgtagcatgg taaattggca aactcacagc caaaccttct gggatattgt gtatagccac
     3661 agctatagct atagcaattc ctaaagtaag attatcaaga cttgaaataa aagtagcaaa
     3721 accttctggg aaattatgta tagcaatagc caaagctgta aaaatccctg tgcgttttaa
     3781 agctttagta ttgatctgat gcaacttttc tccaggatga aatttcggag gattttgtcc
     3841 tttttgaggc aagggacaaa tttttaactc gcttaaatcc tctttaggct cgtgaggatt
     3901 gacatcttcg gggattaatt tatcaatcaa taaagatatt aaaattccac caaaaaaaca
     3961 agccaatcct aaaagttcgg cccaatgcga atcatagtga tttttaaaat ctttaagtgc
     4021 agtaggtaaa atttccatga aagaaatgta tatcattact ccagctgaaa aaccaagccc
     4081 caaagaaagc actcttaaat catcttttct ggaaaaaaag gctattatag aacctatagc
     4141 cgtagaaaaa cctgcaaaaa gagtcaatag cattgcgata aaaatttgtt caaatgtaaa
     4201 ttgcattaat attc
//
LOCUS       DAPIWB010000094         4156 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.095, whole genome shotgun sequence.
ACCESSION   DAPIWB010000094 DAPIWB010000000
VERSION     DAPIWB010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4156)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4156)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4156
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.095"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(6..1226)
                     /locus_tag="RJ266_001576"
     CDS             complement(6..1226)
                     /locus_tag="RJ266_001576"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HDV7355299.1"
                     /translation="MLNNTLFFKQSEIHTISSYANRINDEVKSGDIGYYHLIDTSLNL
                     IDESLAFIKDKEHIKNIVLVGMGGSSCGVKALRDMLFNEKSNQRELFILDNTSSHSFN
                     KTLEKIKLEESLFLIISKTGSTIEVVSLFKLLIEHFKLDMQELKKYFVFITDKDSKLH
                     QEGENLGIKCFFIPANVGGRFSILSAVGIVPLCFCGYNAKALLEGAKACFEDFFTHKK
                     DEILQKAYHYCTHKNANINVLFSYSDAFKGFNEWYIQLIAESLGKKQGYKRIGLTPIA
                     LIGARDQHSFLQLIMDGPKNKTVTFLKIKDAQKAPIIPDIHFKFLDSLSNKVNLHELL
                     NAQCNATMHALIAENLSVDVIELEKLDAWHAGYLMYYYELFTSTCGVMLGINTYDQPG
                     VEVGKLILKNILNS"
     gene            complement(1220..2044)
                     /gene="galU"
                     /locus_tag="RJ266_001577"
     CDS             complement(1220..2044)
                     /gene="galU"
                     /locus_tag="RJ266_001577"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HDV7355300.1"
                     /translation="MLQTCIFPAAGYGTRFLPATKTLPKEMLPILTKPLIHYGVDEAL
                     EAGMENMGFVTGRGKRALEDYFDISYELEHQISGTKKEYLLDEIRSLINRCTFTFTRQ
                     NQMKGLGDAVLKGRPLIGDEAFGVILADDLCVNEEGLNVMAQMVKIYEKYRCTIIAVM
                     EVPKEQVSNYGVISGNFVEENLIMVNSMIEKPSPDEAPSNLAIIGRYILTPDIFGILE
                     NTKAGKNGEVQLTDALLTQATNGMVLAYKFQGKRFDCGSVEGFVEATNYFYEKSKC"
     gene            complement(2126..4099)
                     /gene="acs"
                     /locus_tag="RJ266_001578"
     CDS             complement(2126..4099)
                     /gene="acs"
                     /locus_tag="RJ266_001578"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HDV7355301.1"
                     /translation="MLNQNNQELFKPSKEFSRNARIKNLCEYYDLCDEAKEDFEGFWK
                     RQAFEKIEWFSPFSRVLNEDKAPFYKWFEGGTLNVSYQCLDRHMKTRRNKAALIFEGE
                     MGDYEVYTYRRLLHETCKAANLLKKFGVKKGDRVVIYMPMIPETAIVMLACARIGAIH
                     SVVFGGFSPEALRDRIIDAGAKLVVTADGAFRRGKPYMLKPAVDKALSEGCESVEKVL
                     IVIRNNEPIEYIKGRDYVYNELVKNESYKCEPEIMDSEDLLFLLYTSGSTGKPKGVMH
                     ASAGYILWAQMTMEWVFDIKDYDNYWCSADVGWITGHTYVVYGPLACGATTIMHEGTP
                     TYPNSGRWWRMIEEYQISKFYTSPTAIRMLHADAPNEPRKYDLSTLEVLGTVGEPINP
                     SAWKWFYDEIGGTKSPIVDTWWQTETGGHMITPLPGATPLKPGCATLPLPGIFAEVID
                     EEGNKKDEGEDGLLCITKPWPSMIRGIWGNDERYIESYFSQAKKDGKAVYFSGDGAFY
                     DKNGYITITGRIDDVVNVAGHRIGTAEIESAIAKHPSVAESAVVSILDTIKGESLFAF
                     VVLSPASSCDLGGAIETLKELNDILRVEIGPIAKIEKILYTPGLPKTRSGKIMRRILR
                     TIARGEEIKQDISTLEDSKVVETIVKLAKAEFE"
BASE COUNT         1322 a          852 c          548 g         1434 t
ORIGIN      
        1 tttgattaag aatttaatat attttttaag atcaactttc caacttccac accaggttga
       61 tcataggtgt taatccctag cataacaccg caagttgaag taaaaagttc ataataatac
      121 atcaaatatc ccgcatgcca agcatcaagt ttttcaagtt ctatcacatc aacactcaaa
      181 ttttcagcga ttaaagcgtg catagttgca ttacattgag cgtttaaaag ttcgtgaaga
      241 ttgactttat tacttaaaga atctaaaaat ttaaaatgaa tatcagggat aataggtgct
      301 ttttgagcgt ctttgatttt taaaaaagtt acagttttat ttttaggtcc atccataatg
      361 agttgtaaaa aactatgctg atctcttgct ccaatgagtg caataggagt taaacctata
      421 cgtttatagc cttgcttttt acctaaactt tcagcaataa gctggatata ccattcatta
      481 aagcctttaa aagcatcact atatgaaaaa agtacattga tattggcatt tttgtgtgtg
      541 caataatgat aggctttttg taaaatttca tcttttttat gagtaaaaaa atcttcaaaa
      601 caagctttag ctccttctaa aagagctttg gcattatagc cacaaaaaca aagcggaact
      661 atacctacgg ctgaaagtat gctaaaacga cctcctacat ttgcagggat aaaaaagcat
      721 ttaataccta aattttcacc ttcttgatga agttttgaat ccttatcggt aataaaaaca
      781 aagtattttt ttaattcttg catatcaagt ttaaaatgtt caataagaag tttaaaaagc
      841 gatacaactt ctatagtact acctgttttg ctgatgatta aaaacaaact ttcctcaagc
      901 ttgatttttt ctaaagtctt attaaaagaa tgtgaacttg tgttatcgag tataaaaagt
      961 tctctttggt tgcttttttc attaaaaagc atatcacgca aggcttttac accacaactt
     1021 gaaccaccca ttcccactaa aacgatattt tttatgtgtt ctttgtcttt gataaaagcc
     1081 aaactctcat caattaaatt caaacttgta tcaataagat gataataccc tatatctcca
     1141 ctttttacct catcattaat acgatttgca taagaactta tagtgtgaat ttcactttgc
     1201 ttaaaaaaaa gtgtattgtt taacatttac ttttctcgta aaaataattt gtcgcttcta
     1261 caaagccttc tacacttcca caatcaaagc gttttccttg aaatttataa gctaaaacca
     1321 taccattggt tgcttgagtt aaaagcgcgt cggtaagttg gacttcacca ttttttcccg
     1381 ctttagtatt ttctaaaatt ccaaaaatat caggagttaa aatatatctt cctatgatag
     1441 caagattact tggagcttca tcaggacttg gtttttctat catagaatta accatgataa
     1501 gattttcttc tacaaaattt ccagaaatta ctccatagtt tgaaacttgc tcttttggta
     1561 cttccatcac agctatgatg gtgcagcgat atttttcata aatttttacc atttgagcca
     1621 taacatttaa gccttcttca ttaacacaca aatcatcagc caaaattacg ccaaaagctt
     1681 catcgccaat caaaggtcta ccttttaaaa ccgcatcacc taagcctttc atttgatttt
     1741 gtcttgtaaa agtaaaggta caacgattga tcaaagagcg aatttcatca agtaagtatt
     1801 ctttttttgt acctgaaatt tgatgttcaa gttcataaga aatatcaaaa taatcctcca
     1861 aagctctttt tccacgccct gtgacaaatc ccatattttc cattcctgct tctaaagctt
     1921 catcaactcc ataatggatc aaaggcttgg ttaagatagg taacatctct ttaggtaaag
     1981 tttttgttgc aggtaaaaat ctcgtcccat aacctgccgc agggaaaata caagtttgaa
     2041 gcataaaaat ttccttttat ttttttatca ttatagctta tttttatgaa ttttcatgca
     2101 acaaggcaaa gttctttttg ccttgttatt caaactctgc cttagctaat ttaacaatgg
     2161 tttctactac tttagaatct tcaagtgttg aaatatcctg tttgatttct tcgcctcttg
     2221 ctatagttct taaaattctt ctcattattt taccacttct agtttttggc aaacctggag
     2281 tataaagaat tttttctatt ttagctatag gtcctatttc tactcttaaa atgtcattaa
     2341 gttcttttaa agtttctata gctccgccaa gatcacaact ggatgcagga cttaaaacca
     2401 caaaagcaaa caatgactcg cccttaatcg tatccaaaat actcactaca gctgattctg
     2461 ctacacttgg atgtttagca atagcgcttt caatttcagc cgttcctata cgatgtcctg
     2521 caacattaac cacatcatct attcttcctg tgatggtaat ataaccattt ttatcataaa
     2581 aagcaccatc gccactaaaa tatacagctt ttccatcttt tttagcttga gaaaaataac
     2641 tttctatata gcgttcatca ttgccccaaa ttccacgaat catcgaaggc caaggtttag
     2701 ttatacaaag caacccatct tcaccttcat cttttttatt gccttcttca tcaataactt
     2761 ctgcaaaaat ccctggcaaa ggcaaggtgg cacaacctgg ttttaaagga gtggcgcctg
     2821 gtaaaggcgt gatcatatgc ccacctgttt ctgtttgcca ccaagtatcg actataggac
     2881 ttttagttcc ccctatttca tcataaaacc acttccaagc actaggattg ataggctctc
     2941 caaccgttcc aagcacttca agcgtactta aatcatattt tcttggctca ttaggtgcat
     3001 cagcatgaag cattcttatg gcagttggcg aagtgtagaa tttgcttatt tgatactctt
     3061 ctatcattct ccaccaacgc ccagaatttg gataagtagg agttccttca tgcattatag
     3121 tcgttgctcc acatgctaaa ggcccataaa ctacataagt atgtcctgta atccaaccca
     3181 catcagcact acaccaataa ttatcataat ctttaatatc aaaaacccat tccatagtca
     3241 tttgtgccca aagtatatat cctgcacttg catgcataac tccttttggc ttgcccgttg
     3301 atcctgaagt gtaaagcaaa aacaacaaat cctcactatc cataatttcg ggttcacact
     3361 tataagactc atttttcaca agttcgttat aaacatagtc ccttccttta atatattcta
     3421 taggctcatt attgcgtata actataagta ctttttctac actttcacac ccttcactta
     3481 aagccttatc tactgcaggt tttaacatat aaggtttgcc acgacgaaaa gcaccatcag
     3541 ccgttactac aagtttagct cctgcatcta taattctatc tcttaaggct tcaggagaaa
     3601 accctccaaa tactacacta tgaatagccc caatccttgc acaagctaac attactatag
     3661 ctgtttctgg aatcataggc atataaatta caaccctatc gccttttttt actccgaatt
     3721 ttttaagcaa attggccgcc ttgcaagttt catgcaataa tcttctataa gtataaactt
     3781 cataatcccc catttcacct tcaaaaatca aagcagcttt attgcgtctt gttttcatat
     3841 gacgatcaag acattgataa cttacattta aagttccacc ttcaaaccat ttataaaatg
     3901 gagctttatc ctcatttagc actcttgaaa aaggcgaaaa ccactcaatc ttctcaaatg
     3961 cttgtctttt ccaaaaacct tcaaaatctt ccttggcttc atcgcataaa tcatagtatt
     4021 cacataaatt ttttatacga gcattacgag aaaattcttt acttggctta aaaagctctt
     4081 gattattttg attaagcata aaaactcctt tatggttgtt tttaaacatt atataagagt
     4141 ttatttgtat taaata
//
LOCUS       DAPIWB010000095         3977 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.096, whole genome shotgun sequence.
ACCESSION   DAPIWB010000095 DAPIWB010000000
VERSION     DAPIWB010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3977)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3977)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3977
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.096"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..1302
                     /gene="eptC"
                     /locus_tag="RJ266_001579"
     CDS             <1..1302
                     /gene="eptC"
                     /locus_tag="RJ266_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A/FlgG phosphoethanolamine transferase
                     EptC"
                     /protein_id="HDV7355302.1"
                     /translation="FISFYGVLIDSDMIQNVVQTDIKEVKDLLNLKLILFIVLALLLV
                     FYVVKVKIDYYGSFKSHIKIKIINIISGLIVVCAVLIPLSKTFLPFFRNYNEIRMYNT
                     PFYQIYAVYRYYVRFVKAKPEFKTIANDAYRENNHTKKLLVLVVGETARAANYSLGGY
                     TKNDTNFYTKKDNVVFFDNFSSCGTATAVSLPCMFSISKRENYSSSEFQENAMDVLYK
                     TGVDAAWFDNNSGGCKGVCDRLAYKQKLSSDLDENLLIPFKEKLNHLSDQNIIVLHLQ
                     GSHGPTYYKRYPSEFKKFTPTCDTNELSKCDSEALINTYDNTLLYTDYLLSEIIKLLK
                     EQKSYESSLFYLSDHGESLGENGIYLHGMPYAIAPSYQTHIPAIFWSNDEKLMNLAKE
                     HKGLKLSQDNLFSTLLGYFNVKTSVYEPEYDLLNPKLKANP"
     gene            1299..1655
                     /locus_tag="RJ266_001580"
     CDS             1299..1655
                     /locus_tag="RJ266_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HDV7355303.1"
                     /translation="MKPKYHFLNNARYALEGLFALFKNEMAFRIELCIIIPAIVFSFF
                     LKVSFLEHLLLVSVLILILIVEALNSAIEACVDLITNKWHEKAKIAKDCASAAVFFSV
                     LLALFVWGFILYSIYL"
     gene            1652..1897
                     /locus_tag="RJ266_001581"
     CDS             1652..1897
                     /locus_tag="RJ266_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication/maintenance protein RepL"
                     /protein_id="HDV7355304.1"
                     /translation="MKFENLIREILGKKRFELLKFLCENADENGFIMIKISDLEEKLH
                     QSKPTIIATFKFLEEKKLFKRLKNGFYQLNIGGKNDT"
     gene            1887..2894
                     /gene="pyrC"
                     /locus_tag="RJ266_001582"
     CDS             1887..2894
                     /gene="pyrC"
                     /locus_tag="RJ266_001582"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HDV7355305.1"
                     /translation="MILKNPLDMHLHLRDNQMLELIAPLSARDFCAAVIMPNLIPPLC
                     NLEDLKAYKMRILKACKDENFTPLMTLFFKNYDEKFLYSAKDEIFGIKLYPAGITTNS
                     NGGVSSFDIEYLKPTLEAMSDLNIPLLVHGETNDFVMDRESNFAKIYEKLAKHFPRLK
                     IVMEHITTKTLCELLKDYENLYATITLHHLIITLDDVIGGKMNPHLFCKPIAKRYEDK
                     EALCELAFSGYEKVMFGSDSAPHPRDTKECCGCAAGIFSAPVILPVLAELFKQNSSEE
                     NLQKFLSDNACKIYDLKFKEDKILTLEEKEWQVPNVYEDKYNQVVPYMAGEILKFQLK
                     H"
     gene            complement(2919..3140)
                     /locus_tag="RJ266_001583"
     CDS             complement(2919..3140)
                     /locus_tag="RJ266_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355306.1"
                     /translation="MVKNLIIKFGRLILDAIAAISFVVALLYSLFMMFSIGFLAGLLS
                     LIVSFIALFLSFFVIYLVIDIRDALVNKA"
     gene            complement(3196..3906)
                     /locus_tag="RJ266_001584"
     CDS             complement(3196..3906)
                     /locus_tag="RJ266_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDV7355307.1"
                     /translation="MNLWDKKAKTYARYQNTLNTIQKQTFEYLQNLNISFQNKSIIDI
                     GCGTGVWTLHLAKEILALDSANTMLEILQEDAKKLNLNNIKCENLSFETWMQNNPNVK
                     FDLAFLSMSPALQNEKDYTNFLNLAKIKIYLGWADYRKSDFLDPIFKYFNTEFKGFYK
                     KDLENYLLEKNIFFHKIVFDETRKVQRTKEEAIENALWHLSMNKITTSKEAVSSFVEN
                     DIIETIESKIKLLIINNL"
BASE COUNT         1397 a          500 c          610 g         1470 t
ORIGIN      
        1 tttattagtt tttatggggt acttatagat tctgatatga tacaaaatgt tgttcaaaca
       61 gacattaaag aagtaaaaga tttgttaaat ttaaaattga tcttatttat tgttttggct
      121 ttattattgg ttttttatgt tgttaaagta aaaattgatt attatggtag ttttaaatcc
      181 catataaaaa ttaaaattat caatataata tcaggtttga ttgttgtttg tgcagtttta
      241 atccctttaa gtaaaacttt cttgcctttt tttagaaact ataatgaaat aagaatgtat
      301 aatactcctt tttatcaaat ttatgccgta tatcgctatt atgttcgttt tgtgaaagct
      361 aagccagaat ttaaaaccat agctaatgat gcttatagag aaaacaatca cactaaaaaa
      421 cttttagttt tggtagtggg tgaaaccgct agagcggcaa actactcttt gggtggatat
      481 actaaaaatg ataccaattt ttataccaaa aaagataatg tagtcttttt tgataatttt
      541 tcatcatgtg gaacagcaac agcggtaagt ttaccttgta tgttttctat ttctaagcgt
      601 gaaaattatt caagttcaga atttcaagaa aatgcgatgg atgtgcttta taaaacaggt
      661 gtagatgctg catggtttga taataattct ggtggttgta aaggggtttg tgatagatta
      721 gcttataagc aaaagctttc tagtgatttg gatgaaaatt tactcattcc ttttaaagaa
      781 aaattaaatc atttaagtga tcaaaatata atagttcttc atttgcaagg ttctcatggg
      841 ccaacttatt ataaacgcta tccaagtgaa tttaaaaaat ttactccaac ttgtgatact
      901 aatgaacttt caaaatgtga tagcgaggct ttaatcaaca cttatgacaa tactttgctt
      961 tatacagatt atcttttaag tgagattata aaactattaa aagagcaaaa aagctatgaa
     1021 agttctttgt tttatctttc agatcatggc gaaagtttgg gtgaaaatgg tatttatctt
     1081 catggtatgc cttatgctat agcgccaagt tatcaaactc atattcctgc tattttttgg
     1141 agcaatgatg aaaaattaat gaatttagct aaagagcata aaggtttaaa actttctcaa
     1201 gataatcttt ttagcactct tttaggatat tttaatgtaa aaacaagtgt ttatgagcca
     1261 gaatatgatt tattaaatcc taaacttaag gcaaatccat gaaacctaaa tatcattttt
     1321 taaataacgc aagatatgct ttagaagggc tttttgcttt atttaaaaat gaaatggcgt
     1381 ttagaattga actttgcatt attatccctg cgatagtttt tagttttttc ttaaaagtta
     1441 gttttttgga gcatttgtta ttggtaagtg tcttaatact tatcttaatt gtagaagctt
     1501 taaattcggc tattgaagct tgtgttgatt tgattacaaa taaatggcat gaaaaggcaa
     1561 aaatcgctaa agattgtgcg agtgcggcag tgttttttag tgtgctttta gctctttttg
     1621 tttggggctt tattttatat agtatttact tgtgaaattt gaaaatttaa tacgagaaat
     1681 tttaggaaaa aagcgttttg aattgttaaa atttttatgt gaaaatgccg atgagaatgg
     1741 ttttattatg attaaaatca gtgatcttga agaaaaatta catcaaagta aacctaccat
     1801 catcgctact tttaagtttt tagaagaaaa aaaacttttt aagcgtctta aaaatggatt
     1861 ttatcagcta aatataggag gcaaaaatga tacttaaaaa tcctttggat atgcatttgc
     1921 atttaagaga taatcaaatg ttagaactta ttgcaccttt gagtgcaaga gatttttgtg
     1981 cagctgtgat tatgccaaat ttaatccctc cgctttgcaa tttagaagat ctaaaagctt
     2041 ataaaatgcg tatccttaag gcttgtaaag atgaaaattt cactccttta atgacacttt
     2101 tttttaaaaa ttatgatgag aaatttcttt acagtgctaa agatgaaatt tttggcatta
     2161 agctttatcc agcaggaatt acaacaaatt caaatggtgg agtttcaagt tttgatatag
     2221 agtatttaaa acctacttta gaggctatga gtgatttaaa tattcctttg ttagtgcatg
     2281 gagaaaccaa tgattttgta atggacaggg aaagtaattt tgctaaaatt tatgaaaaat
     2341 tagccaaaca ttttccacga cttaagattg ttatggagca tattaccact aaaactttat
     2401 gtgaactttt aaaagattat gaaaatttat acgcgacaat cactttacat catttaatca
     2461 tcactttaga tgatgttatt ggaggtaaaa tgaatcctca tcttttttgt aagcctatag
     2521 ccaagcgtta cgaagataaa gaagcccttt gcgaacttgc ttttagtggt tatgaaaaag
     2581 ttatgtttgg aagtgatagt gcgcctcacc caagagatac taaagagtgt tgtggttgtg
     2641 ccgcaggtat atttagcgcc ccagtgattt tacctgtttt agctgaatta tttaagcaaa
     2701 atagctcaga agaaaatttg caaaaatttt taagcgataa tgcttgtaaa atttatgatt
     2761 taaaatttaa agaagataaa attttaactt tagaagaaaa agaatggcaa gtgccaaatg
     2821 tttatgaaga taaatacaat caagtcgtgc cttatatggc tggagaaatt ttaaaatttc
     2881 aattaaaaca ttgatttccc accttaaagg tggaaaattt aagctttatt tacaagagca
     2941 tctctgatat ctataacaag atagattaca aaaaaactta aaaataaagc aataaaactg
     3001 actatcagcg ataataaacc agctaaaaat ccaatgctaa acatcataaa aagagaataa
     3061 agcaaagcta caacaaaact tatcgctgca attgcatcaa gaatcaagcg tccaaatttg
     3121 atgattaaat ttttaaccat taaaaactcc tttgaaataa tgagtgaaat tgtaataaat
     3181 atcagcttaa tatttttata agttatttat aattaaaagt tttattttag attctatagt
     3241 ttcaataata tcattttcaa caaaagaact tacagcttct ttagaagttg tgattttgtt
     3301 catgcttaaa tgccatagag cattttctat agcctcttct tttgttcttt ggactttgcg
     3361 tgtttcatca aaaacaatct tatgaaaaaa tatatttttt tctagtaaat aattttctaa
     3421 atctttttta taaaaacctt taaattcagt attaaaatat ttaaaaatcg gatctaaaaa
     3481 atcacttttt ctataatcag cccaaccaag ataaattttt attttggcta gatttaagaa
     3541 atttgtataa tctttttcat tttgtaaagc aggagacata cttaaaaatg caagatcaaa
     3601 tttaacatta ggattgtttt gcatccaagt ttcaaagctc aaattttcgc attttatatt
     3661 gttaagattt agttttttag catcttcttg taaaatttca agcatagtat ttgcactatc
     3721 tagggctaaa atttctttag ctaagtgtaa agtccaaacc ccagttccac atcctatgtc
     3781 tataatactt ttattttgaa aagaaatatt taaattttgt aaatattcaa aagtttgctt
     3841 ttgtatggtg tttaaagtgt tttgatatct tgcgtaagtt ttggcctttt tatcccataa
     3901 attcatatat tttccttgat aaaatatata aaatcatagc ataaattttt aaaattcaag
     3961 cccttttttt tgggctt
//
LOCUS       DAPIWB010000096         3920 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.097, whole genome shotgun sequence.
ACCESSION   DAPIWB010000096 DAPIWB010000000
VERSION     DAPIWB010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3920
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.097"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..607)
                     /locus_tag="RJ266_001585"
     CDS             complement(<1..607)
                     /locus_tag="RJ266_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(A) polymerase"
                     /protein_id="HDV7355308.1"
                     /translation="MDLKSLKNNRLYILKRLGVLKFLSIIEALLVGFLAFVFIRDALI
                     AVILAVFVGVFFFRFTAKKLKLAQKELQINALNLFLRRFGAKFKKQSLSQKDFLKLGL
                     TKDLKEFKSQNCFEFKDFKIYDIQFLDENKRFFCGILLEILSANKNPSFENEEQIYIK
                     LQDKNFTLNHVFSKENHYLIATLSNPFFIDIKKDLESNFKDL"
     gene            complement(607..2415)
                     /gene="typA"
                     /locus_tag="RJ266_001586"
     CDS             complement(607..2415)
                     /gene="typA"
                     /locus_tag="RJ266_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HDV7355309.1"
                     /translation="MENIRNIAVIAHVDHGKTTMVDELLKQSGTFSEREQISERVMDS
                     NDIEKERGITILSKNTAINYKGTKINIIDTPGHADFGGEVERVLKMIDGVLLLVDAQE
                     GVMPQTKFVVKKALSLGLKPIVVINKIDKPAADPERVINEIFDLFVALDANDEQLDFA
                     IVYAAAKNGYAKLDLNDESDNMEPLFKTILERVPAPSGSDENPLQLQVFTLGYDNFVG
                     KIGIARIFNGVVKKNQSVMLAKADGTKVNGRISKLIGFMGLEKMDIEEAGSGDIVAIA
                     GFEALDVGDSVVDPNNPMPLDPLHIEEPTLSIVFSVNDGPLAGTEGKHVTSNKIAERL
                     EAEMKTNIAMKYESTGEGKFKVSGRGELQITILAENMRREGFEFCMGRPEVIVKVEDG
                     VKTEPFEHLVIDVPEEFSGAVIEKLGKRKAEMKTMAPTGDGQTRLEFEIPARGLIGFR
                     SQFLTDTKGEGVMNHSFLEFRPFSGAVEKRNNGALISMENGVALGYSLFNLQERGVLF
                     IEPQTKVYTGMIIGEHSRPNDLDVNPIKGKNLTNVRASGSDDAIKLVPPRKLSLERAL
                     EWIEEDELVEVTPVNVRVRKRYLDPTQRKRMEKAKS"
     gene            2550..2873
                     /locus_tag="RJ266_001587"
     CDS             2550..2873
                     /locus_tag="RJ266_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355310.1"
                     /translation="MSKPLNEEIFVEFKSDLAERKNEVLLQVLELLETFRSDENEKMA
                     RISSELTEILENEENLEKILNAKNLEELLNILTALNEDKMIKVYEDSYLKEKFPNVMV
                     DKFLK"
     gene            2889..>3920
                     /locus_tag="RJ266_001588"
     CDS             2889..>3920
                     /locus_tag="RJ266_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HDV7355311.1"
                     /translation="MMSNLAPQNDVLNLTPSKTSTTSSSFSKTSKNKEHESSDSKNST
                     QDDTESFLNSLLNSINETNEFLPDHMKISQKEVVNEAMSRLQKGAFDESDKISIFESA
                     SFMQILSLLDKLKTDTADVKLANLSTQLSSLIKTEANFNALKGASNLSELLDIAKDLG
                     LNVKNIKVDRLLDLKATFPNLDKADFFKGAVDNVFKEIINNKISNVSKNLNHNLENTT
                     HTTSTHSMQKTNSKDSGSLLSQTLKNLDSILSSKESKHEKNDKVKSKIEEDTTDAKNT
                     LKNIKNDEFAKNLTEELNIKDKKNQDNLNKESKDLNKDFNKELNKNQEKNNLNQENIQ
                     DQNKNLKNND"
BASE COUNT         1383 a          655 c          555 g         1327 t
ORIGIN      
        1 ctaaatcttt gaaattgctt tctaaatctt tttttatatc tataaagaaa ggattgctta
       61 aagtagcgat aagataatga ttttctttag aaaaaacatg atttaaagtg aaatttttat
      121 cttgaagttt gatataaatt tgctcttcat tttcaaagct aggatttttg tttgcactta
      181 aaatttcgag caaaattccg caaaaaaagc gtttattttc gtccaaaaac tgaatatcat
      241 aaattttaaa atccttaaat tcaaagcagt tttgactttt aaattctttc aaatcctttg
      301 taagtcctaa ttttaaaaag tctttttggc ttaaactttg ctttttaaat tttgccccaa
      361 aacgacgtaa aaataaattt aaagcattaa tttgtaattc tttttgtgcg agttttagtt
      421 ttttagctgt aaaacgaaag aaaaaaacac ctacaaaaac agctaaaatt actgcgatta
      481 aggcatctct tataaaaaca aaggctaaaa aacctacaag taaggcttcg ataatgctta
      541 ggaattttaa gactcctaag cgtttaagta tataaagtct attatttttt aagcttttta
      601 aatccattaa gattttgctt tttccattct ttttctttga gttgggtcaa gatagcgttt
      661 gcgaacacgc acatttacag gcgtaacttc tacaagttca tcttcttcta tccactctaa
      721 agctctttca agacttaatt ttctaggtgg cacaagcttg attgcatcat cgcttccact
      781 tgctcttaca ttggtaagat tctttccttt gataggatta acatctaaat catttggacg
      841 agagtgctca cctataatca taccggtata aactttagtt tgaggctcta tgaaaagtac
      901 tccacgctct tgaaggttaa acaaagaata ccctaaagcc acgccatttt ccatagaaat
      961 taacgctcca ttattacgct tttcaaccgc accgctaaaa ggacggaatt ctaaaaagct
     1021 atgattcatc acgccttcgc ctttggtatc agttaaaaac tgacttctaa aacctataag
     1081 tccgcgtgct ggaatttcaa actcaagtct tgtttgtcca tcgcctgttg gtgccatggt
     1141 tttcatttca gcttttcttt tgccaagttt ttctattacc gcaccactaa attcttcagg
     1201 cacatcgata actaaatgtt caaaaggttc tgttttaact ccatcttcaa cttttacgat
     1261 aacttcaggt cttcccatgc aaaactcaaa accttcacga cgcatatttt cagctaaaat
     1321 agtgatttga agttcgcccc taccgcttac tttaaattta ccttctcctg tgctttcgta
     1381 tttcatagca atattagttt tcatttcagc ttctaaacgt tcagcgattt tatttgaagt
     1441 tacatgtttt ccttcagttc ctgctaatgg tccatcattt acagaaaata ctatgcttaa
     1501 agtcggctct tcaatgtgta aaggatcaag tggcatagga ttgtttggat ctacaacgct
     1561 atcacccaca tctaaagctt caaaacctgc tatagctacg atatctccac ttcctgcttc
     1621 ttcgatgtcc attttttcta agcccataaa gccaatgagt tttgaaattc taccatttac
     1681 cttggtacca tcagcttttg caagcattac gctttggttt ttcttcacaa ccccattgaa
     1741 aattctagca atgcctattt tacctacgaa attatcatac cccaaagtga aaacttgaag
     1801 ctgcaaagga ttttcatcac taccacttgg agctggaacg cgttcaagta tggttttaaa
     1861 aagtggctcc atattatcac tttcatcgtt tagatcaagc ttagcataac cattttttgc
     1921 tgcagcataa actatagcaa agtcaagttg ctcatcgttt gcatctaggg ctacaaaaag
     1981 atcaaaaatt tcattgatca ctctttcagg atcagcagct ggtttgtcta ttttgttgat
     2041 tacaactata ggtttaagcc ctaaagataa agctttttta accacgaatt tagtttgtgg
     2101 cataacgcct tcttgagcat ctactaaaag caaaactcca tcaatcattt ttaaaacacg
     2161 ttctacttct ccgccaaaat cagcatgccc tggagtatct atgatgttga tttttgtacc
     2221 tttgtaattg atcgctgtgt tttttgaaag tatggtaata ccgcgttctt tttctatatc
     2281 gttgctatcc ataacgcgtt ctgaaatttg ttctctttcg ctaaaggtgc ctgattgttt
     2341 taacaattca tctaccatag tggttttacc atggtcaacg tgagctataa ctgctatatt
     2401 tctaatgttt tccaaatttt cttctccaaa gctaaatttt taaaagctta aattatacaa
     2461 aaatttaact taaactacaa agtatcaaaa cttggaacac ttcttgcttt aaaaacttat
     2521 gaaattaaaa ttttaaaaag gaagttaaaa tgtcaaaacc attaaatgaa gagatttttg
     2581 ttgaatttaa aagtgattta gctgaaagaa aaaatgaagt tttgcttcaa gttttagagc
     2641 ttttagaaac ttttagatca gatgaaaacg aaaaaatggc aagaatttca agtgagctta
     2701 cagaaatttt agaaaatgaa gaaaatttag agaaaatttt aaatgctaaa aatttagaag
     2761 agcttttaaa tatcttaact gctttaaatg aagataagat gattaaagta tatgaagatt
     2821 cttatttgaa agaaaaattt cctaatgtaa tggtagataa atttttaaaa taattttttg
     2881 aaggaaaagt gatgtcaaat ttagctccgc aaaatgatgt tttaaatctt acgccgagta
     2941 aaacttctac tactagcagt tcttttagta aaactagtaa aaataaagaa catgaaagta
     3001 gtgatagtaa aaattcaact caagatgata cggaaagttt tttaaattct ttgcttaatt
     3061 ctatcaatga aaccaatgaa tttttacctg atcatatgaa gatcagtcaa aaagaagttg
     3121 ttaatgaagc gatgagcaga cttcaaaaag gagcttttga tgagagcgat aagataagca
     3181 ttttcgaatc tgcttctttt atgcaaattc tttctttgtt agataagcta aaaacagata
     3241 cagcagatgt taaactagca aatctttcta ctcaactttc aagtcttatt aaaacagagg
     3301 ctaattttaa tgctttaaaa ggtgcatcaa atcttagtga gcttttggac atagctaaag
     3361 atctgggctt aaatgtaaaa aatattaaag tagatcgtct tcttgatctt aaagcaactt
     3421 ttccaaattt agataaggct gattttttta agggtgctgt ggataatgtt tttaaagaaa
     3481 tcatcaataa taaaatttcc aatgtgagta aaaatttaaa tcacaattta gaaaatacaa
     3541 ctcatactac aagcactcat tctatgcaaa aaacaaattc taaagatagc ggttctttgc
     3601 tttctcaaac tttaaaaaat ttagattcca tactttcatc caaagaaagc aaacacgaaa
     3661 aaaacgataa agttaaatca aaaatagaag aagataccac agatgctaaa aatactttaa
     3721 aaaatatcaa aaatgatgag tttgcaaaaa atttaacaga agagttaaat ataaaagata
     3781 aaaaaaacca agataattta aataaagaaa gcaaagactt aaacaaagat tttaataaag
     3841 agttaaataa aaatcaagaa aaaaacaatt taaatcaaga aaatatacaa gatcaaaata
     3901 aaaatttaaa gaacaatgat
//
LOCUS       DAPIWB010000097         3852 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.098, whole genome shotgun sequence.
ACCESSION   DAPIWB010000097 DAPIWB010000000
VERSION     DAPIWB010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3852)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3852)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3852
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.098"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(5..1027)
                     /gene="selD"
                     /locus_tag="RJ266_001589"
     CDS             complement(5..1027)
                     /gene="selD"
                     /locus_tag="RJ266_001589"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(977..979),aa:Sec)
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HDV7355312.1"
                     /translation="MQYKNQNLTHFVKAAGUAAKLSPGGLKTILNFMQKTPALLSDIG
                     NNEDASVYQISPDLALVQTLDFITPIVDSAYHFGAIAAANALSDVFAMGAEVINALNI
                     VGFDTCNHDLNILKELLEGANDKVKECNALVVGGHTIESTELFFGLSVTGKVHPSKFI
                     ANNTSKIGDCIILTKPLGIGILSTALKAQMLNQKHLDIMLKNMMELNYKASQIALKFH
                     PSAMSDVTGFGLLGHLKEMLNKNISFEIFESELPFLDGVKEYFNMGLIPAGAYKNLEF
                     IKELTPDLNEEKLLLCDPQTSGGLLISISEKDSLECLKKLEDENIQAKIIAKVVNKQE
                     NDIIIS"
     gene            complement(1037..1609)
                     /gene="yedF"
                     /locus_tag="RJ266_001590"
     CDS             complement(1037..1609)
                     /gene="yedF"
                     /locus_tag="RJ266_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HDV7355313.1"
                     /translation="MKIDCRNLSCPQPIVETKNALEKLQENEILEIVLNSIISKNNVV
                     KFLNSLNLNPVVDENAQEFCIKVQKKNFDSSEVNIHDYNVLFLKTDKVGEGELGQNLL
                     VGFLSTLKNLDHAPSKILCVNESVLINVDENHKAHLAMKELENLGIEIISCGACLEFF
                     NKSKELKIGNIGNAYEILNELFGKAKIITL"
     gene            complement(1720..3822)
                     /gene="ccaA"
                     /locus_tag="RJ266_001591"
     CDS             complement(1720..3822)
                     /gene="ccaA"
                     /locus_tag="RJ266_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate chemotaxis receptor CcaA"
                     /protein_id="HDV7355314.1"
                     /translation="MFKSLNIGLKLIFSVAAVVVIGLVILISLITKQVSQNITKNTED
                     ILASITKEYATQTQGIFGEMIALNKSISGTLTEMFRSTSKEDLDIDNITNIITNTFDN
                     SAYSNFTYLYLIDPPEYFKEESKFFNTQSGKFVMLYADEEKDNKGGIKAIQASDEIAN
                     LQVVQDILKKAKYGENKVYIGRPIKMNLEGQDFDAVNVAMPIFDRKNQVVGVIGMTLD
                     FSDIATYLLDPKGQKYDGELRVLLNSDGFMAIHPNKNLVLKNLKDINPNKGAQETYKA
                     ISEGKNGVFNYIASDGDDSYAAINSFKVQDSSWAVLVTAPKYSVFKPLKKLQLIILGA
                     SFIFIFVVLGVVYYCVRKIVASRLPVILSSLESFFRFLNHEKIEPKAIEIRANDELGA
                     MGRIINENIEKIQISLEQDQNAVDESVQTAREIEKGNLTARITKNPINPQLVELKDVL
                     NRMLDVLQSKIGSNMNEINRVFDSYKALDFSTEVFNAKGEVEITTNILGKEIKKMLLA
                     SSNFAKDLANQSEELKNSMQKLADGSNAQASSLEQSAAAVEEINSSMQNVSGKTVEVA
                     SQADDIKNIVNVIKDIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRQLAERTGKS
                     LSEIEANINILVQSVNEVAESVKEQTAGITQINDAIAQLETVTKENVEVANVTNNITN
                     EVNQIAAAILEDVNKKRF"
BASE COUNT         1284 a          661 c          464 g         1443 t
ORIGIN      
        1 aaaattaaga aatgataata tcattttctt gcttatttac aaccttagca ataattttag
       61 cttgaatatt ttcatcttct agttttttta aacattctaa ggaatctttt tcacttatag
      121 aaattaaaag tcctcctgaa gtttgtggat cacaaagtaa taatttttct tcatttaaat
      181 caggggtaag ttcttttata aattctaaat ttttataagc tccagcagga attaaaccca
      241 tattaaaata ctcttttact ccatctaaaa aaggaagttc actttcaaaa atttcaaaag
      301 aaatattttt atttagcatt tcttttaaat gtcctaaaag tccaaaacct gtaacatcac
      361 tcatggcact tggatgaaat ttaagagcaa tttgactggc tttataattt aactccatca
      421 tgtttttaag cattatatct aaatgttttt gatttaacat ttgcgccttt aaagctgtac
      481 ttaaaattcc tattcctaaa ggcttggtta aaatgataca atctccgatt ttagaagtat
      541 tattagcaat aaatttacta ggatgtactt ttcctgtaac actaagtcca aaaaaaagct
      601 cggtgctttc tatagtatgg ccacccacga ctaaagcatt acattcttta actttatcat
      661 ttgcaccttc taaaagctct tttaagatgt ttaaatcatg attacaagta tcaaaaccta
      721 ctatatttaa ggcattaatt acctctgcac ccatagcaaa aacatcgctt aaagcatttg
      781 ctgcagcaat agcaccaaaa tgataagcac tatctactat aggagtgata aaatcaagcg
      841 tttgcaccaa agctaaatcg gggctgattt gatatacgct tgcatcttca ttatttccga
      901 tatcactaag taaagcagga gttttttgca tgaaatttaa aattgtttta agaccacccg
      961 ggcttaattt cgctgctcag cctgctgctt taacaaaatg cgttaaattt tgatttttat
     1021 attgcagtgt ttttccttat agagtaatga tttttgcttt accaaaaagc tcgtttaaaa
     1081 tttcataagc attgcctata tttcctattt taagttcttt gcttttatta aaaaattcta
     1141 gacaagctcc acaacttatg atctcaatac ctaaattctc aagttctttc atagctaaat
     1201 gtgctttatg attttcatca acattgatta aaacactttc atttacgcaa agaattttac
     1261 ttggagcatg atctaaattt tttaaggtac ttaaaaatcc tacaagtaaa ttttgtccca
     1321 attcaccctc acccactttg tcggttttta aaaataaaac attataatcg tgaatattta
     1381 cttcactaga atcaaaattc tttttttgta ctttgatgca aaactcttgt gcattttcat
     1441 ctacaacagg gtttaaattt aaagagttaa gaaattttac aacattattt tttgaaataa
     1501 tagaatttaa aacaatttct aaaatttcat tttcttgaag tttttcaaga gcgttttttg
     1561 tttcaactat aggctgagga caagatagat tgcgacaatc aattttcatt atttttcctt
     1621 gatattagct ttgaaaaata atattatttt attacttgtt ttgtgtttaa aaattttaaa
     1681 taatatagaa aaaatttaaa agctcaaaaa tgagcttttt taaaatcttt ttttattcac
     1741 atcttcaaga attgccgcag caatttgatt gacttcattt gttatattat tggtgacatt
     1801 tgcaacttcg acattttcct tagttacagt ttcaagttgt gctatagcat cgttaatctg
     1861 tgtgattcct gctgtttgtt cttttacaga ttctgctact tcatttacac tttgaacaag
     1921 tatattaata tttgcctcga tttcagataa ggattttcct gttctttccg caagctgtct
     1981 tacctcatct gcaacaactg caaaaccacg cccatgttct ccagcacgtg cagcttcaat
     2041 agctgcattt aaagcaagaa gattcgtttg ctcagcgata tctttaatca cattgacaat
     2101 attttttata tcatcagctt gtgaagcaac ctcaactgtt tttccactta cattttgcat
     2161 agaagaatta atctcctcca cagctgcagc cgattgttct aaagaactcg cttgtgcatt
     2221 agagccatca gcaagttttt gcatagaatt ttttaactct tctgactgat tggctaaatc
     2281 tttagcaaaa tttgaagaag ccaaaagcat ctttttaatt tctttgccta aaatattagt
     2341 tgtaatctca acttcacctt tagcattaaa tacttctgta ctaaaatcaa gagccttata
     2401 actatcaaaa actctattaa tttcattcat attagaacca attttacttt gtaaaacatc
     2461 aagcatccta ttaagaacat ctttaagttc tactaattga ggatttatag gatttttagt
     2521 aattcttgca gttaaattac ccttttcgat ttctctagca gtttgcaccg attcatctac
     2581 agcattttga tcttgttcta aagatatttg aatcttttca atattttcat ttatgattct
     2641 tcccattgct cctagctcat cattagcacg aatttcaata gccttaggtt caattttttc
     2701 atgatttaaa aaacggaaaa atgattctaa agaactaaga atcacaggca atctagatgc
     2761 gacaattttt cttacgcaat aataaaccac tcctaaaaca acaaaaataa aaataaaaga
     2821 tgcaccaaga ataattaatt gtaatttttt taagggttta aatactgaat atttaggagc
     2881 agttaccaaa actgcccaag aactatcttg cactttaaaa ctattaatcg cagcataaga
     2941 atcatcacca tcagaagcta tatagttaaa aactccattt tttccttcac ttatggcctt
     3001 ataagtttct tgtgcacctt tattaggatt gatatctttt aaatttttta aaactagatt
     3061 tttatttgga tgtatcgcca taaaaccatc tgaatttaaa agaactctta attcaccatc
     3121 atatttttga cctttagggt ctaaaagata agtagcaata tctgaaaaat ctaaagtcat
     3181 gcctatgaca cctacaactt gattttttcg atcaaaaata ggcatagcaa catttacagc
     3241 atcaaaatct tgaccttcta aattcatctt aataggacgg cctatatata ctttattttc
     3301 cccatatttt gcttttttta atatatcttg cacaacttgc agattagcta tttcatcact
     3361 agcttgtatt gcttttattc cgcctttatt atccttttct tcatcagcgt aaagcataac
     3421 aaattttcca ctttgagtat taaaaaattt actctcttct ttaaagtatt ctggcggatc
     3481 aataagatat aaataagtaa aattagaata agcactatta tcaaaagtat tggttataat
     3541 atttgttata ttgtctatat ctaaatcttc tttagaggtt gatctaaaca tttctgttaa
     3601 agtacctgaa atacttttat ttaaagcgat catttcccca aaaattcctt gagtttgagt
     3661 agcatattct ttcgtgatag aagcaagaat atcttctgta tttttggtaa tattttgact
     3721 tacttgtttt gtgattaatg aaattaaaat aacaagtcca ataacaacaa cagctgccac
     3781 agaaaaaata agttttaaac ctatatttaa agatttaaac atcttataac tcctaaaaaa
     3841 taaaaaattt ag
//
LOCUS       DAPIWB010000098         3833 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.099, whole genome shotgun sequence.
ACCESSION   DAPIWB010000098 DAPIWB010000000
VERSION     DAPIWB010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3833)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3833)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3833
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.099"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            15..881
                     /locus_tag="RJ266_001592"
     CDS             15..881
                     /locus_tag="RJ266_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV7355315.1"
                     /translation="MEIFLDLLNTQSPTHTANNFSITQPNVSIVIKNLENKFDGILFE
                     RLGKKLLPTPKALELGKNWLKIIQAYYQSLEKLNDESMLLGEIKIASTQSISEHFLAP
                     ILFDFKAEFKNIEIRSQTQNSKECLNLLKNGNIEFAIIEAELDPALVEYENLEINFWQ
                     DDELIVATSDKKLNEKEFYIDELLEQKWILREVGSGLRDKFLNEIGASSKKLNIFLEL
                     DRMAAIKELVLQKKAISIFSKKSIEKELKNSTLYEIKLKNIDLKRKFYTLKRKNYNFN
                     RALEKFEKIFKS"
     gene            961..2829
                     /gene="rpoD"
                     /locus_tag="RJ266_001593"
     CDS             961..2829
                     /gene="rpoD"
                     /locus_tag="RJ266_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HDV7355316.1"
                     /translation="MNAKTQEAELEELFQENAKDYITYEKLVKYLTKQPSASTAKKVQ
                     ALMKKHKVQLFSAAEIAQMKNIEDAKRLQEEKQKLQDTSLENEFDLANENDLLEWSRS
                     DSPVRMYLREMGQIALLNKDEEIEISKKIELGEDIIIDAFCSVPYLIDFILDYKEPLI
                     NRERRVKELFKSFDDEEKSDDKLDELDIDEDEENETELESDEENTKKNSKKEDERTLK
                     VIEKFKALEKAKKDWLKTSKDKESGDELLDKLSIAFKKNILKEKLMDLGPTSKLISEI
                     VKSMETALKSDEEFDKELKRLEYRLPMFSDELKKRHADILKDITKLSKEEITERALET
                     TMVSTYMEIKKLFQTKEASEKSFDLEKSRLKEILEQIKRGKKISDEAKGRMAKSNLRL
                     VVSIAKRYTNRGLPFLDLIQEGNIGLMKAVDKFEYKRGYKFSTYATWWIRQAISRAIA
                     DQARTIRIPIHMIETINQINKIIREHLQKDGKEPDVSVIAKEVGLSVDKVKQVIKITK
                     EPISLEAPIGNEDDGKFGDFVEDRNSLSPMDHILKDDLKEQIDEVLDQLNDREKAVIR
                     MRFGLMDDESDRTLEEIGKELNVTRERVRQIESSAIKKLKHPKVGRKLKNYIEGWK"
     gene            complement(2845..3357)
                     /locus_tag="RJ266_001594"
     CDS             complement(2845..3357)
                     /locus_tag="RJ266_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HDV7355317.1"
                     /translation="MKKIYIIRHAKASKSEDIDDFERKLTKSGKEDLKKLFKNLASHE
                     IHPDLVLSSPAVRTAKTAKKIAKFYNFDKNRICFDERLYLCNVENLLKILQDIDDEFN
                     EVFLVGHNPSLMELGELLSSLCLASFPTSSILCLEFDIKEFKNLKKHSGKLVFFEHVR
                     KLKEEKDLGF"
     gene            complement(3354..3827)
                     /locus_tag="RJ266_001595"
     CDS             complement(3354..3827)
                     /locus_tag="RJ266_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HDV7355318.1"
                     /translation="MISYDYYNILGLNILFFNGAYWQLLSLMFLHGNLTHLILNMIVL
                     FQFGRMLETYLGALCFIFIYFIGGLLCSLLSVFYVYFDFKYFGENINVIGASGAICVL
                     MGFYAVIDKNSTKGLIVAILLMSFVPLLMGVNVAWYGHIFGFMCGYILAKIKEVK"
BASE COUNT         1655 a          555 c          544 g         1079 t
ORIGIN      
        1 tgaaaatcaa agatatggaa atatttttag atcttttaaa cactcaaagt ccaactcata
       61 cagccaacaa tttttccata actcaaccta atgtttcaat agtaattaaa aatttagaaa
      121 ataaatttga tggcatttta tttgaaagac ttggaaaaaa actcttacct acaccaaaag
      181 ctttagaact aggaaaaaat tggttaaaaa ttatacaagc ctactaccaa agcttagaaa
      241 aattaaacga cgaaagtatg ctcttagggg aaataaaaat agcctcaact caaagcattt
      301 ctgaacattt tttagctcct attttatttg attttaaggc agaatttaaa aacatagaaa
      361 ttcgctctca aacgcagaat tcaaaagaat gtttaaattt actaaaaaac ggaaatatag
      421 aatttgcaat cattgaagca gaacttgatc cagctttagt ggagtatgaa aatttagaaa
      481 taaatttttg gcaagatgat gaacttatag tagctacaag tgataaaaaa ctcaatgaaa
      541 aagaatttta tatcgatgaa cttttggaac aaaagtggat tttaagagaa gtaggctcag
      601 gcttaaggga taaattttta aacgaaattg gtgcaagctc aaaaaaactt aatatttttc
      661 ttgaacttga tagaatggct gcgattaaag aacttgtttt acaaaaaaaa gcaatctcta
      721 ttttttccaa aaaaagcata gaaaaagaat taaaaaattc aacactttat gaaattaaat
      781 taaaaaatat cgacctaaag cgtaaatttt ataccttaaa aagaaaaaat tataatttta
      841 acagagcttt agaaaaattt gaaaaaatat tcaaatcata aacataataa ccgatttata
      901 tagaaagtta agcaattttt agataaaatc caaagcttat ataaatttca aggataatca
      961 atgaacgcca aaactcaaga agctgaatta gaagaattat ttcaagaaaa tgcaaaagat
     1021 tatatcacat atgaaaaatt ggtaaaatat cttacaaaac aaccaagtgc atcaaccgct
     1081 aaaaaagtgc aagcattaat gaaaaaacac aaagtgcaac ttttttcagc agccgaaatt
     1141 gcacaaatga aaaacataga agatgcaaaa agacttcaag aagaaaaaca aaaactccaa
     1201 gatacaagcc ttgagaacga atttgattta gccaatgaaa acgatttatt agaatggagc
     1261 agatcagact ctcctgttcg tatgtattta agagaaatgg gacaaattgc tttattaaac
     1321 aaagatgaag aaattgaaat ttccaaaaaa atagaacttg gcgaagatat tatcattgat
     1381 gctttttgtt ctgtacctta tttgatagat tttattttag attataaaga acctttaata
     1441 aacagagaaa gaagggtaaa agaactattt aaaagctttg acgatgaaga aaaaagtgat
     1501 gataaacttg atgaacttga tatagatgaa gatgaagaaa acgaaacaga attagaatca
     1561 gatgaagaaa ataccaaaaa aaacagcaaa aaagaagatg aaagaacttt aaaagttata
     1621 gaaaaattta aagctctaga aaaagctaaa aaagattggc taaaaacatc caaagacaaa
     1681 gaaagcggag atgaactttt agataaatta agcattgcgt tcaaaaaaaa tattttaaaa
     1741 gaaaaattaa tggatctagg ccctacttca aaacttatta gtgaaatcgt aaaatcaatg
     1801 gaaactgcac taaaaagcga tgaagaattt gacaaagaac ttaagcgttt agaataccgc
     1861 ttacctatgt tttctgatga acttaaaaaa cgccatgcag atattttaaa agatattaca
     1921 aaattgagca aagaagaaat cacagagcga gctttagaaa caaccatggt aagcacttat
     1981 atggaaatta aaaaactatt tcaaactaaa gaagctagtg aaaaaagctt tgatcttgaa
     2041 aaatcacgtt taaaagaaat tttagagcaa attaaacgcg gtaaaaaaat ctctgatgaa
     2101 gcaaaaggaa gaatggcaaa atcaaacttg cgtcttgttg taagcatagc taaacgctac
     2161 acaaatcgtg gcctaccttt cttagacctt atccaagaag gaaatatagg tttgatgaaa
     2221 gctgtggata aatttgaata caaaaggggt tataaatttt ccacttatgc aacttggtgg
     2281 atcaggcaag ctatttcaag agctatagct gatcaagcaa gaaccataag aattccaatc
     2341 catatgatag aaaccatcaa tcaaattaac aaaattatcc gcgaacatct acaaaaagat
     2401 ggaaaagaac ctgatgtcag tgttatagct aaagaagtag gtttaagcgt agataaggtt
     2461 aaacaagtta ttaaaatcac aaaagaacca atttctcttg aagctccaat aggaaatgaa
     2521 gatgatggta aatttggaga ttttgttgaa gatagaaatt cactttctcc aatggatcat
     2581 atcttaaagg atgatttaaa agaacaaatt gatgaagttt tagatcaatt aaacgataga
     2641 gaaaaagcgg taattcgtat gcgttttggt ttaatggatg atgaaagtga tagaacttta
     2701 gaggaaattg gaaaggaact taatgtcact cgagaaagag tgagacaaat agaaagctca
     2761 gctataaaaa aactcaaaca ccctaaagta ggaagaaaac taaaaaatta tatagaaggt
     2821 tggaagtaag agtcaatctc cttactaaaa acccagatct ttttcttctt ttaacttgcg
     2881 tacatgttca aaaaaaacta attttccgct atgttttttt aaatttttaa attccttaat
     2941 atcaaattct aaacacaaga tagaagaagt tggaaaagaa gctaaacata gcgaacttaa
     3001 taactctcca agctccatta aactaggatt atgacccact aaaaatactt cattaaactc
     3061 atcatcaata tcttgcagaa tttttagcaa attttcaaca ttgcaaagat acaatctttc
     3121 atcaaaacaa attctatttt tatcaaaatt ataaaatttg gctatttttt tcgctgtttt
     3181 agcggttcta acagcaggac ttgatagcac caaatcagga tgaatttcat gcgaagcaag
     3241 atttttaaaa agttttttta aatcttcctt tccactctta gtaagttttc tttcaaaatc
     3301 atcgatgtct tcactcttac ttgcttttgc atgtcttata atataaattt ttttcatttt
     3361 acctctttta ttttagctaa aatataacca cacataaacc cgaaaatatg accataccaa
     3421 gcaacattta cccccataag caatggcaca aaactcataa gtaaaattgc cactataagt
     3481 ccttttgtac tatttttatc aataacagca taaaagccca ttaaaacaca aattgcacca
     3541 ctagcgccta tgacatttat attttctcca aaatatttaa aatcaaaata cacataaaaa
     3601 acacttaaaa gtgagcacaa caatccgcca ataaaataaa taaaaataaa acacaaagca
     3661 cccaaataag tttctaacat acgcccaaat tgaaacaaaa ctatcatatt taatataaga
     3721 tgagttaaat ttccatgtaa aaacattaaa cttaaaagct gccaataagc tccattaaaa
     3781 aataaaatat tcaaaccaag gatattgtaa taatcataag aaatcaaaaa ata
//
LOCUS       DAPIWB010000099         3828 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.100, whole genome shotgun sequence.
ACCESSION   DAPIWB010000099 DAPIWB010000000
VERSION     DAPIWB010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3828)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3828)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3828
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.100"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            46..133
                     /locus_tag="RJ266_001596"
     tRNA            46..133
                     /locus_tag="RJ266_001596"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:80..82,aa:Ser,seq:gga)
     gene            180..255
                     /locus_tag="RJ266_001597"
     tRNA            180..255
                     /locus_tag="RJ266_001597"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:213..215,aa:Ala,seq:ggc)
     gene            259..334
                     /locus_tag="RJ266_001598"
     tRNA            259..334
                     /locus_tag="RJ266_001598"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:292..294,aa:Val,seq:gac)
     gene            509..1774
                     /locus_tag="RJ266_001599"
     CDS             509..1774
                     /locus_tag="RJ266_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002871902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDV7355319.1"
                     /translation="MANIAKQSLQDKDIRNLKPSDKRYKKAVGNPKELYIFVYPSGQK
                     TFSIKINDKYTKLKEFRENIYSVAEARKEAIQFLKEFEKCKDIRLLKNGNDKYKFKNL
                     FILYIDQKQKKCLSNSYVKKIIQMVEKYLMPSLGNLDVKNIKYSDLLSIFNAIYNPNN
                     PYTSRLETIHRLINHVQGIFRIALKDRYIDFDPSNGLKDNFASPKRFQNNHNIDTRYP
                     ALIQSEDLKEFIQDLKQDNRMEKQTKRALYLQILSINRPFNTASAKWANIDFEKQIWT
                     IPANETKTKIAHEIPLTKTMIKVLKEQFLFSGEISDFIFLARTIQGHINRDSIGKAIK
                     NLGAKNKWHKKASSHGFRATFRTICSQHKAELLKLNISEEVIESVLAHKELNQIKFSY
                     EREKATIAQKRELLQWYENYLNNLEHLGL"
     gene            complement(1961..2254)
                     /locus_tag="RJ266_001600"
     CDS             complement(1961..2254)
                     /locus_tag="RJ266_001600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355320.1"
                     /translation="MKKKIRFVNNQKDFMDKEIEKHLDNPNLRGMVTTQEMLSFPKAA
                     KGVEANNEARGYTWQVKANDGNTLVYGSRKYETNNEKIHRLATSHSKTEKNEK"
     gene            complement(2342..2818)
                     /locus_tag="RJ266_001601"
     CDS             complement(2342..2818)
                     /locus_tag="RJ266_001601"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355321.1"
                     /translation="MSNKIENYPNIEKLQTILNELAFHQIRQAWIDKKIPQYSLIILE
                     RWAEFYPNTIKNLGMSDLMTLALPQAQMELAILESKEANKKRDQGLTDMEILAEEQIN
                     LNQYIAIEPQIYSPLFQEMMMKDKEQIQEETINNQYWKLQQEMMDMKEEASNLDKN"
     gene            complement(3170..3820)
                     /locus_tag="RJ266_001602"
     CDS             complement(3170..3820)
                     /locus_tag="RJ266_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002871903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV7355322.1"
                     /translation="MIGKKLKDLRNAYGISQREFGEKVGITKGSINSYENNVNPITQG
                     AKWKILQATGIGFDYFDTDMTLAEAFEKYNINPSKIAFKEIEESICTIYEGVKNYIDG
                     KCLEPFNVKSWVLNHLFSDLGNFDLCFIKVKHNELEPYAKNDEILVVLNNKYVENGDK
                     IIIEYKNTILVVQYFDEFDTIRLKSIGGEEIKLTSDEFKKKVKIVANIKGKYYFEI"
BASE COUNT         1259 a          619 c          522 g         1428 t
ORIGIN      
        1 tttattttta aagcttttat agatataatg aacgctttat ttcatagaca ggtgtccgag
       61 cggttgaagg agcacgcctg gaacgcgtgt aaagtgcaag ctttcgaggg ttcgaatccc
      121 ttcctgtctg ccatcaaata aactttaagg caaactaagt tataatacaa acttcatttg
      181 gggcattagc tcagctggga gagcacaacg ctggcagcgt tggggtcagc ggttcgaacc
      241 cgctatgctc caccatatgg ttccgtagct cagctggtag agcactacct tgacatggta
      301 gtggccgttg gttcaagtcc aatcggagcc accatattat atttcattac ttttctcttg
      361 tttttaaaaa tatctcttaa ttaccataaa taagttattc taatgtattt tgatttcaat
      421 taacttcttt tgtgttataa ttatttctaa ttaattaggg ttattattaa ggttctcaaa
      481 gtccaatagg gttctttaaa ggaaaatgat ggcaaacata gcaaaacaaa gcttacaaga
      541 taaagacatt agaaatttaa aacctagcga taaacgatat aaaaaagctg taggtaatcc
      601 aaaagaactt tatatttttg tatatcctag cggtcaaaaa acttttagta ttaaaattaa
      661 tgacaaatac acaaaactta aagaatttag agaaaacatt tatagcgtag ctgaagctag
      721 aaaagaagct attcaatttt taaaagaatt tgaaaaatgt aaagatatac ggttattaaa
      781 aaatgggaat gataaatata agtttaaaaa cttatttatt ctttatatag atcaaaaaca
      841 aaaaaaatgt cttagcaata gctatgttaa aaaaattata caaatggtag aaaaatatct
      901 catgccaagt ttaggaaatt tggatgtaaa aaacataaaa tatagtgatt tattatctat
      961 atttaatgct atttataatc caaacaatcc ttatacaagc aggttagaaa ccatacaccg
     1021 tttaatcaat catgttcaag gtatttttag aatagcctta aaagatagat atattgattt
     1081 tgatcctagc aatggcttaa aagataactt tgcttcccct aaaagatttc aaaacaatca
     1141 taatatagat acaagatatc ccgctttaat tcaatcagaa gatttaaaag aatttattca
     1201 ggatctaaag caagataata gaatggaaaa acaaacaaaa agggctttgt atttacaaat
     1261 tcttagtatc aatagacctt ttaacactgc tagtgcaaaa tgggctaata tagattttga
     1321 aaaacaaatt tggactatac cagcaaatga aacaaaaaca aaaattgcac atgaaattcc
     1381 acttaccaaa acaatgatta aggtattaaa agaacaattt ttatttagcg gagaaattag
     1441 tgattttatt tttctagcta gaaccataca aggacatata aatagggata gtataggaaa
     1501 agcaattaaa aatttaggag caaaaaataa atggcacaaa aaagcaagtt ctcacggatt
     1561 tagagcgact tttagaacta tctgttctca acacaaagca gagcttttaa aactaaatat
     1621 tagcgaagaa gttattgaaa gtgttttagc gcacaaagaa cttaatcaaa taaaattttc
     1681 ttatgagaga gaaaaagcta caatagcaca aaaacgagag ttattgcaat ggtatgaaaa
     1741 ttatctcaat aatctagagc atttagggct ataaaactct cttaactcct tttctttggt
     1801 ttgaaatata gttcttattt ttggtgctaa attcttctaa ttttgcttta aaatcattta
     1861 cggatttgtt ttgttgtgat ataatatttt cagcggattt gcgaaaattg aagtcgttaa
     1921 atatgggatg gtggggatga ctacgcccac ccacttccgc ttatttttca ttcttctctg
     1981 ttttactatg gcttgtcgct aacctatgaa ttttttcgtt attagtttca tattttctac
     2041 ttccataaac taaagtattt ccatcgtttg cttttacttg ccaagtatag cctcttgctt
     2101 cgttgttagc ttccacacct ttagccgcct taggaaaaga taacatctct tgtgtagtaa
     2161 ccattcctct taaatttgga ttatctaaat gtttttcaat ttctttatcc ataaaatctt
     2221 tttggttatt tacaaagcgg attttcttct tcaatagttt ttgaaagttt aatggcttga
     2281 aggttttttt gaaatctatc ttttaaagag ccaagataga tttcatcatc gcttacaaaa
     2341 tctaattttt gtctagattt gaggcttctt ctttcatatc catcatttct tgttgcagtt
     2401 tccaatactg attgttgatt gtttcttctt gtatctgctc cttatctttc atcatcattt
     2461 cttgaaataa aggagaataa atttggggtt ctattgctat gtattgattg agatttatct
     2521 gttcttccgc tagtatctcc atatctgtta gcccctgatc tctcttcttg ttcgcttctt
     2581 tgctctccaa aattgctaat tccatttgag cttgtggtaa tgctagtgtc atgagatctg
     2641 acattcctag attcttgatt gtgttcggat aaaactctgc ccatctctct agtattatca
     2701 aactgtattg cggaattttc ttgtctatcc acgcttggcg tatttgatga aatgctagtt
     2761 cgttcaatat tgtctgtaac ttctctatgt tcggataatt ctctattttg ttgctcattt
     2821 tctcctcctt gtgaaatctt aactttataa atctgctttt tataacatcc aattatctct
     2881 ttttgatttc tttttactct ctttttgatt ttgttaaaaa gagagtaaat ctctattttc
     2941 tagcatttat aatctcaaaa aaatcttact ttttattttt gcatgtcaaa aacttttata
     3001 aaatcagaaa tctttttgaa attatcaaat ttttcaggat gttttttata aagatctttt
     3061 aaatttttca ctaattcttc atcttataag agtttttcta actcatcata aagttcaaga
     3121 atcttcattc ccttgtcctt tttaaaccct ttgcattctt agtctaaaat cagatttcaa
     3181 aataatactt accttttatg ttagctacaa tctttacttt ctttttaaat tcatcacttg
     3241 tgagttttat ttcttctcca ccaatgcttt taagtcttat tgtatcaaac tcatcaaaat
     3301 attgaacaac caaaatggta tttttgtatt caataattat tttatctcca ttttctacat
     3361 atttattatt taaaacaact aaaatttcat catttttagc ataaggctct aattcattat
     3421 gttttacttt aataaaacat aaatcaaaat tacctagatc gctaaacaag tgatttaaaa
     3481 cccacgattt aacattaaaa ggctccaaac attttccatc tatgtaattt ttaacacctt
     3541 cataaatagt gcaaatactt tcttctattt ctttaaatgc aattttgctt ggatttatat
     3601 tatatttttc aaaggcttct gcaagtgtca tatctgtatc aaaataatca aatcctatgc
     3661 cagtagcttg taaaattttc cattttgcac cttgcgtaat tggatttaca ttattttcat
     3721 aggaattaat gctgcctttt gtaatgccaa ctttttcgcc aaactctctc tgactaatac
     3781 cataagcatt gcgtaaatct tttaacttct tacctattat attcttca
//
LOCUS       DAPIWB010000100         3583 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.101, whole genome shotgun sequence.
ACCESSION   DAPIWB010000100 DAPIWB010000000
VERSION     DAPIWB010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3583)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3583)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3583
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.101"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            147..1211
                     /locus_tag="RJ266_001603"
     CDS             147..1211
                     /locus_tag="RJ266_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDV7355323.1"
                     /translation="MKYPLDCEENFEKSFLFWLAKYVKFKLNSLSNKELKNPQALAEV
                     NFALTKGVKNIDELDALAKKARNAGLSGVNTYFNPLKKVFEYLNFYKLYSLKQIDEEL
                     IVEVLASITGALSDASKKNYRIAVINFFDFLDKQNEEDEKAHIFDINLKNWAGIAGSK
                     GVKLPEFMSEEELKKFLDAIENADFKNNTIRNKLIIKIIIFTGIRVSEAINIKMGDIS
                     EENDLYIIRIRAKGNKYRVVMIKKELIYDLLKNVSINYMSKDALLFVNKKGTPLTQSY
                     VSRIVEQLLFRAGIRKQKNGAHMLRHTFATLLYKKQKDLVLVQEALGHASLNTSRIYT
                     HFDNDKLKLAAQVAKELSDS"
     gene            1201..2985
                     /locus_tag="RJ266_001604"
     CDS             1201..2985
                     /locus_tag="RJ266_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HDV7355324.1"
                     /translation="MTLENYAVFGKYFYHDLKHTLKAFNHKESKKCFKFIEKYKNDFY
                     ILMLADYELYRYFQDKNFTSKKAYLSVFAFKKRKKFQKEDIDEEKFIPEFINFLDQDN
                     YKENFIKVKEAISKGRVYQINLTQNFKFHSKMDSFELFKLLLSRQDTEFKAFIKDEAR
                     EILSFSPELFFKTKKRKIFTKPMKGTIKRDKDPIKDEENKIFLQNDTKNLSENVMICD
                     LLRNDLSKIITKKSLKTKLFEIQSHPTLHQMTSRAQGKLKKNISLYQIFKALFPCGSI
                     TGAPKLESIKFIEELEQRERGIYCGTIGLIHKNKNKFSVAIRTLEKQDEIYTYSTGSG
                     LVWDSKFKDEFEELKLKSAILNPCDFHLFETMYFKNSQILFLKEHLLRLINSALKFNF
                     NTHKLFKDFYNILNQKSSYKEYQNFTLFKLDEKIFHKKHSLFYNFPLPFKNPHKEGIL
                     KLILYKDGRYEFQQSALKQNSNDILLLSDDKINSKSDNLYHKSSLRTFYNQHSYKWQQ
                     NLCYDIAFFNEKDELCEGSRTNLILEKNARFYTPQIQSGMLNGVYRNFLINLGLIKEK
                     ALFKQDLFEAENIYCINSVRGLKKVKLQ"
     gene            2982..3548
                     /locus_tag="RJ266_001605"
     CDS             2982..3548
                     /locus_tag="RJ266_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HDV7355325.1"
                     /translation="MKKILFIDNYDSFSYTIIYYLKELGFECKVIKNDAFKKAKELEK
                     FDFTHLIISPGPHSPKESKLSLKAIKYFKKNKKILGICLGHQCIAEIFGGRVSKMQNP
                     MHGKISQLYFKKDPIFKGIKKEIEICLYHSLHISSMPKKCKILAHNSENIIMAIKHKK
                     YPIYGLQFHPEAVLTQKGKKILKNFMKL"
BASE COUNT         1440 a          484 c          468 g         1191 t
ORIGIN      
        1 aagatttatt taataaaaat attttaatct tttttcctcg catgcaaaaa caaacttttt
       61 cctaaaaaag ctttttttta ctaagttaat actaaaatac cttttatagt taaaaagcta
      121 aaattttaga tttaggaaaa gtttttatga aatacccttt agattgtgaa gaaaattttg
      181 aaaaatcatt cttattttgg ttagcaaaat atgtaaaatt taaactcaac tcactatcta
      241 acaaagagtt aaaaaatcca caagctttag cagaagttaa ttttgctctt acaaaaggtg
      301 taaaaaatat tgatgaactt gacgctctag caaaaaaagc aagaaatgct ggtttaagtg
      361 gagttaatac ttattttaat cctttaaaaa aagtatttga atatttaaat ttttataagc
      421 tttactcttt aaaacagatt gatgaagaac tcattgtaga agttttagca agtataacag
      481 gtgctttatc agatgcaagc aaaaaaaatt accgtattgc tgtgattaat ttttttgatt
      541 ttttagacaa gcaaaatgaa gaagatgaaa aagcacatat tttcgatatc aatcttaaaa
      601 actgggcagg tatagcaggt tctaaagggg taaaattacc tgaatttatg agcgaagaag
      661 agcttaaaaa atttcttgat gctattgaaa atgcagattt taaaaacaat accatacgca
      721 ataaacttat tattaaaatc atcattttta caggcatacg ggtaagtgaa gctatcaata
      781 tcaaaatggg tgatattagc gaagaaaacg atctttatat cataagaata agagctaaag
      841 gcaataaata tcgtgttgta atgataaaaa aagaacttat ttacgatttg cttaaaaatg
      901 taagtattaa ttatatgagt aaagacgccc tactttttgt caataaaaaa ggcactccac
      961 tgactcaatc ttatgtcagt cgcatagtag aacagctttt atttcgtgca ggaattcgca
     1021 aacaaaaaaa tggtgctcat atgttgcgtc atacttttgc caccctgctt tataaaaagc
     1081 aaaaagattt agttttagtt caagaagctt tagggcatgc aagtttaaat acctcaagaa
     1141 tttacactca ttttgataat gataaattaa aacttgccgc acaggttgca aaggaattaa
     1201 gtgactcttg aaaactatgc tgtttttggt aaatattttt accatgattt aaaacacact
     1261 ttaaaagcct ttaaccacaa agaaagtaaa aaatgcttta aatttataga aaaatataaa
     1321 aatgattttt atattttaat gcttgctgat tatgagctat atagatattt tcaagataaa
     1381 aatttcacaa gcaaaaaggc ttatttgtct gtatttgctt ttaaaaaaag aaaaaaattt
     1441 caaaaagaag atatcgatga agaaaaattt attcctgaat ttataaattt tttagatcaa
     1501 gataattaca aggaaaattt catcaaggtt aaagaggcaa tctccaaagg aagagtttat
     1561 caaatcaacc tcactcaaaa ttttaaattt catagcaaaa tggattcttt tgaacttttt
     1621 aaacttttgc tttctagaca agatactgaa tttaaagctt ttataaaaga tgaagcaaga
     1681 gaaattttgt ccttctctcc tgaacttttc ttcaagacca aaaaaagaaa aatatttaca
     1741 aaacctatga aaggtacaat taagcgtgat aaagatccta taaaagatga agaaaataaa
     1801 attttcttgc aaaatgatac aaaaaatcta agtgaaaatg ttatgatttg tgatctttta
     1861 cgcaacgatc tttcaaaaat catcacaaaa aaaagcttaa aaaccaaact ttttgaaatt
     1921 caaagtcacc ctactttaca tcaaatgact tcaagagcac aaggaaaact taaaaaaaat
     1981 atttctttat atcaaatttt taaagctctc tttccttgtg gttctattac aggtgctcca
     2041 aagcttgaaa gcattaaatt tattgaagaa ttagaacaaa gagaacgtgg tatttactgc
     2101 ggaactatag gtttaataca caaaaataaa aataaattta gcgtagccat acgcacctta
     2161 gaaaaacaag atgaaattta tacttatagc accggtagcg gcttggtttg ggactcaaaa
     2221 tttaaagatg aatttgaaga attaaaactt aaaagtgcga tcttaaatcc ttgtgatttt
     2281 catctttttg aaaccatgta ttttaaaaat tctcaaattt tatttttaaa agaacattta
     2341 ttaaggctta taaattcagc tcttaaattt aattttaata ctcacaagct ctttaaagat
     2401 ttttataata ttttaaatca aaaaagttct tataaagaat atcaaaattt tacacttttt
     2461 aaactcgatg aaaaaatttt ccacaaaaaa cactctttat tttataattt tcccctaccc
     2521 tttaaaaatc cacataaaga aggaatttta aagcttattt tatacaaaga cggaagatac
     2581 gaatttcaac aaagtgcctt aaaacaaaat tcaaacgata ttttgctttt aagtgatgat
     2641 aaaattaact caaaaagtga caatctctat cacaaaagct ctttacgtac tttttataat
     2701 caacactcat acaaatggca acaaaacttg tgttatgaca tagctttttt taacgaaaaa
     2761 gatgaacttt gcgaaggctc aagaaccaat ctcatcttag aaaaaaacgc tcgattttat
     2821 actccacaaa ttcaaagcgg tatgttaaat ggcgtatata gaaatttctt aatcaatctt
     2881 ggcttgataa aagaaaaagc attatttaaa caagatttat ttgaagcaga aaatatttat
     2941 tgcattaatt ccgtgcgtgg tttaaaaaag gtaaaattac aatgaagaaa attttattta
     3001 tagataatta tgattctttt agttatacca tcatctatta tcttaaagaa cttggttttg
     3061 aatgtaaagt gataaaaaat gatgccttta aaaaagctaa agaattagaa aaatttgatt
     3121 ttactcatct tatcatctct cctggccctc attctcctaa ggaatctaaa ttaagcttaa
     3181 aagcaatcaa atattttaaa aaaaataaaa aaattttagg tatatgttta ggacatcagt
     3241 gtatagccga aatttttggc ggtagggttt ctaaaatgca aaatcccatg catggtaaaa
     3301 tttctcaact ttattttaaa aaagatccta tttttaaggg tattaaaaaa gaaattgaaa
     3361 tttgcttata tcattcttta cacatcagtt ctatgcctaa aaaatgcaaa attttagctc
     3421 ataattcaga aaatatcatt atggcaatta aacataaaaa gtatcctatt tatggattgc
     3481 aatttcaccc cgaagcggtt ttaactcaaa aaggcaaaaa aatacttaaa aactttatga
     3541 aactttagtc ttttttgcat ttaaaatata aatatgaaaa tct
//
LOCUS       DAPIWB010000101         3495 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.102, whole genome shotgun sequence.
ACCESSION   DAPIWB010000101 DAPIWB010000000
VERSION     DAPIWB010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3495
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.102"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(107..3471)
                     /locus_tag="RJ266_001606"
                     /pseudo
     CDS             complement(107..3471)
                     /locus_tag="RJ266_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345045.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         1073 a          664 c          456 g         1302 t
ORIGIN      
        1 taaatacaat aaaaacatcc atcctaataa ttttaaaatt atcaggatga aatttttaac
       61 aagtaggaga gtaaactaat taaactaagt attatctttt ataagattac caaagataat
      121 taaactgagc aaatcctgta tgggtattgc catctttatc aaacattcca ttatagttta
      181 aactaaaata gaaagcttca ttaacaggaa cgataaaaga agtgcttaca aatttttgta
      241 ctcttggtaa atcaaactca tcacttactt ttatattacc aaatctagcc tcagcttcta
      301 ctttaggatt gatattaaac ttagctccaa gttctactga agtttttaaa ttaggcaacc
      361 aatctctaaa ccaagtaaga cttgttttag tagagaaaag atttaaatag tttgcatagg
      421 ttctttctcc acctttaact gttgcttgtc ctatggtgtc tttcatagaa aaagcttcag
      481 tataacctcc ttcataagca agacctattt caggagagaa tatatcttta ttagaaataa
      541 aattcatacc taaggctgta ttgactccat aagcataaga attaggttca gctttagctt
      601 cattatttcc tattttttta gttaaatcat ttttaatcaa agcagcttta ccttgagctt
      661 tgatataaac ttcttgacct ttttctgtag taaataaggt attaaagtat tttaaacctg
      721 cataataggt tctattatta atatcaaaat aagttgaacc catttttgta tcttcataac
      781 ctgcatacac accatatatt ccactgtctt ttaaagtaga ataacctata atggttcctt
      841 tagtgtgtcc tttactttct tcatttaaag aaagttcaac attctgtgaa gaagtataag
      901 gaaggatgaa taaagaatgt tctttattag aaccatagct tccattattt aaatcactct
      961 ttatataatc acttgcatct gcatataaat tacccttttc agacatagcg atgctttgag
     1021 atttacttga agaagctaaa gcaaagcttt gcatagaatt acccataaca ttatctataa
     1081 aggttgatct tcttgaagta gtagagatta aagatctaaa ggttgcacct gatatggaag
     1141 cattaagatt aaaatctgta gtaagctttc ctgttattgg atcatagctt aaagatattt
     1201 ctccacttcc attggttcct atattgccaa tattgttttg attaacacct gagatgatgt
     1261 tgtttatatc gtttagctct tcaagatcaa cattgctttg atctacggtg atgttttcta
     1321 cttttacatt aaaagctcta cttccaccta taaccacagt gtttaattta cctgtgtttt
     1381 tatctgtaga aacaagccaa tctttgattc caacactacc actaccattg ttagttactg
     1441 tattaccatt ttcatcttta cctactgagc cttgattgga gatttcaact tgtgctgatc
     1501 ctgaaacagt gatgccgtta tttatggttg agccttgtga attggaaata ctagtgcttc
     1561 cacttcctga agaactaata ccgccactaa tagttccacc attactattg ctaatcacca
     1621 tatcagcact acctgtactt tcaatcttac caccgatatt acctgaatta gaaatttcaa
     1681 gtttattatc actattgtta gtaatagaac cacttatacc tgtagatgat gtagaagtgt
     1741 tagtgataga atcaagttta ctatttttat ctacagtaat tgaaccagaa atagctccat
     1801 taccctcatt ggtaatggaa tcaatactac taccaccact tacttgaaca cttcctgaga
     1861 tacttccatt accttgatta acaagaccac cttctacctt agctccacct tctatcttga
     1921 tatcactacc tatagaagca ttacctgtat tgattatatt tccttcaagt ttagtgtttt
     1981 tcccactaac agtaatacca cctgttatac ttcctgagcc agagttagct atggctcgat
     2041 tcgaagtagc tgtaacagtt gctccatctt ttatggttat agagccttct atttttccac
     2101 ttcgattcaa tataccaaca cctcttccac cttctaccct agaaccttcg ccagataaaa
     2161 tcatttctcc acttaaagag gccgagttta tcaatcttat accatcgatc ttacctttta
     2221 taatgccacc gtttttaagt tctatttttt gagtttgtga gttattctct aataaaattc
     2281 catgttcctc actataaatt ccacttactg tgccattatt tgaacgtcca tctatatata
     2341 aatctcctag agtttgcgat cgacccactc ctattcccac gtattttcca taaaccatac
     2401 ctccattttt tatggtaagt gttccaaata ctccataagc tgaacctata ccaacattat
     2461 tactacttat ggttccagta ttgattatat gctctataaa accaccatat tctaataata
     2521 tactagaacc ccattctcct tcagcatgta taattcctgt attttcaaca gtttttatat
     2581 gctgagatgt taccattata gcagaatgtc ctccttttat tgtgccattg ttaacaagct
     2641 tttctatggt agcattgcta cttatccata taccattatt ccattgtcca ctaccagggg
     2701 aattaataaa accattatta gtaaaagtat ctatttttgt atttatagcc actcccactt
     2761 ctgagccttg tatagttccg ttgttattaa aattttttat ggttcctatg ttgcctatat
     2821 ctacaccctt atttgcacta ataaaaccac tgttattaaa ggtttgtatg ttggtattct
     2881 ttccttcaaa aaaactcctt tattgttgtc aattatggtt ccactattgt caaatttatc
     2941 tatattaaga gttcctgagt tgttacccca aattcccatg taaatttgtc cattaatttg
     3001 acctgtattt tcaaaggtgt tgacagcaat agttcctgta aaattaccat tgttttctat
     3061 accaatctta ccattaatag ttctattatt agtaagattt gcaagagtaa gagtgttgct
     3121 accattagca tgggcataga tgattttacc tgtattgcct atgctaccta gagttccact
     3181 tgatccgatt gttaaagaat ttgatgttcc atttccagta atagttactt gttgattgtg
     3241 taaagaattt atagtcgtat tgatcttagc ttgagggcta taaacacttg ctgatctagt
     3301 tttaacattt ttattaactt catcataagt ttttatttca gaatttaatt tagcattagc
     3361 acaacttgcc aaaaaagaaa tagtagctaa agataaaact atctttttag aatttaaaca
     3421 gggttctttg ccctctccta taggtatttt agttaatgtg atatttttca taagattttc
     3481 ctccctttat aattt
//
LOCUS       DAPIWB010000102         3299 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.103, whole genome shotgun sequence.
ACCESSION   DAPIWB010000102 DAPIWB010000000
VERSION     DAPIWB010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3299)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3299)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3299
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.103"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            10..1920
                     /locus_tag="RJ266_001607"
     CDS             10..1920
                     /locus_tag="RJ266_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HDV7355326.1"
                     /translation="MEQSQFQPIVNFIWSVADDLLRDVYVKGKYRDVILPMTIIRRID
                     AVLEPTKDKVLKTYNTYKDEFENLESLLGGKQGNKLGFFNYSRFNLQTLLNDPKNIRI
                     NFENYLDCFSENIKDIILKFKFKNQLDTLEESNILFGVIERFCSPKVNFGIEDILDEK
                     GNVIHKGLSNLGMGYVFEELIRKFNEENNEEAGEHFTPREIIELMTHLVFLPVKEQIK
                     QGTWLIYDNACGSGGMLTESKEFITDPEGLIQSKANIYLYGQEINPETYAICKADMLI
                     KGENPERIKFGSTLSNDQQNLQFDFMLSNPPYGKSWENDQKILGVEKKGSNSTCNDPR
                     FSVGITSKSDGQMMFLLNMLSKMKFDTPLGSRIASVHNGSSLFNSDSGMVAIRKHIIE
                     NDYLEAIVALPTNMFYNTGIPTFIWIITNKKSEHKKGKVQLINTTNEEYFSKMKKSLG
                     SKQNEMTKEHIEKITKLFLENASNKDCKILDNEDFGYTKIIIEKPKSIEALKDDEKFA
                     KLKDKDKILEKLQELEQNPQDFKNREEFIKFLGVKLKKSEENLIIDSDKTNNTEKIPL
                     KTNIQGYYDTEVKPYVANSWIAWESASVGYEILFSKYFYTYTPPRKLEEINNELEKLE
                     KEVQDLLREIVQ"
     gene            1917..3194
                     /locus_tag="RJ266_001608"
     CDS             1917..3194
                     /locus_tag="RJ266_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002914515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDV7355327.1"
                     /translation="MKNFKESGIEWLGEIPEHWEVVKINKIVTFVNGYAFENFDFNPI
                     FEIPVIRIGDMQKEKILYDNCLKTKEKEKLKQFLISNNDILIALSGATTGKIAFCDTD
                     NKAYINQRVAIVRSKLKLVKYYFLTRGFSLLIELACNGSAQPNISTKEIGEFKIPLPP
                     LKEQEQIANFLDEKCKKIANFIEKKEKLITLLKEQKQALINETITKGLDKNINFKDSG
                     IEWLGEIPQHWRIVKLKYVAFTNIGLVYTPDDIIENPDEGYPVLRANNIQNGKIDYQD
                     LIYIKSKQIGKKQIISSGDLLMCVRNGSENLLGKTAKIQDGYFSFGAFTAIIKSQFND
                     YFYWIFQTNMLRKSIASFSASNGIGQISQDDIKNFIISFPPLKEQEQIAQFLDSEISK
                     IDKIIEKTKKQIKLIKEYKTTLINQAVCGRIDL"
BASE COUNT         1353 a          456 c          537 g          953 t
ORIGIN      
        1 gaacacatca tggaacaaag ccaattccag cccattgtca actttatatg gagtgtggca
       61 gatgatttgc ttcgtgatgt ttatgtaaag ggcaaatacc gcgatgttat cttacccatg
      121 acaatcataa gaagaattga tgcggtttta gagcctacaa aagataaagt tcttaaaacc
      181 tacaatacct ataaagatga atttgaaaat ttagaatctt tgctaggtgg aaaacaaggg
      241 aataaactag gcttttttaa ttattctcga tttaatctac aaacccttct aaacgatcca
      301 aaaaacataa gaataaattt tgaaaattat cttgattgtt ttagtgaaaa tatcaaagat
      361 atcattttaa aatttaaatt caaaaaccaa ctcgataccc tagaagaatc caatatactt
      421 tttggtgtta tagaaagatt ttgctcgcct aaggtaaatt tcggtataga agatatttta
      481 gatgaaaaag gtaatgttat ccataaaggc ttgagtaatc ttggcatggg gtatgttttt
      541 gaagagctta tccgtaaatt taacgaagaa aataatgaag aagccggaga gcactttacc
      601 ccaagagaga ttatagagct tatgactcat cttgtatttt tgcctgtaaa agagcagatc
      661 aaacaaggaa catggcttat ttatgataat gcttgtggaa gtggtggtat gctaacagaa
      721 tcaaaagaat tcatcacaga tcctgaagga cttatacagt caaaggcaaa tatttatctt
      781 tacggacaag aaatcaaccc tgaaacttat gctatatgca aagcagatat gctgataaaa
      841 ggcgaaaatc cagagcgcat aaaatttggt tctaccttaa gcaatgatca acaaaactta
      901 caatttgatt tcatgcttag caatccacct tatggtaagt cttgggaaaa tgatcaaaaa
      961 attctaggcg tggaaaagaa aggttcaaat tcaacttgta atgatccaag atttagtgta
     1021 ggcattacaa gcaaaagcga tggacaaatg atgtttttgc tcaatatgct tagcaagatg
     1081 aaatttgaca cccctttggg ttctcgtatc gcaagcgtgc ataatggaag ctcacttttt
     1141 aactcagata gcggtatggt agctataaga aagcatatca tagaaaacga ctatcttgaa
     1201 gctatagtcg ccctacctac taatatgttt tataatacag gaattcccac ttttatatgg
     1261 atcatcacca acaaaaagtc agaacacaaa aaaggcaaag tccagcttat aaacactaca
     1321 aatgaagaat atttttcaaa aatgaaaaag tctttaggct ctaaacaaaa tgaaatgact
     1381 aaagaacata tagaaaaaat cactaaatta tttttagaaa atgcaagtaa taaagattgc
     1441 aagattttgg ataatgaaga ctttggctat actaaaatca tcatagaaaa accaaaaagc
     1501 atagaagctt taaaagatga tgaaaaattt gcaaaactaa aagacaaaga taaaatctta
     1561 gaaaaattac aagaattaga acaaaatcca caagacttta aaaacagaga agaatttatc
     1621 aaatttttag gcgtaaagct caaaaaaagc gaagaaaatc tcatcattga tagtgataaa
     1681 actaacaata ctgaaaaaat tccactcaaa acaaatatac aaggctatta tgacacagaa
     1741 gtaaagcctt atgtagcaaa ctcttggata gcgtgggaga gtgcaagtgt gggctatgaa
     1801 atacttttta gcaaatattt ttatacctac acaccaccaa gaaagctaga agagataaat
     1861 aacgaattag aaaagctaga aaaagaagtg caagatcttt taagagagat tgtgcaatga
     1921 aaaatttcaa agagagtggc atagaatggc ttggggaaat tccggagcat tgggaagtgg
     1981 tgaaaatcaa caagatagta acttttgtaa atggatatgc ttttgaaaac tttgatttta
     2041 atccaatttt tgaaattcct gtgattcgta tcggagatat gcaaaaggaa aaaattttat
     2101 atgacaattg cctaaaaaca aaagaaaaag aaaaattgaa acaattttta attagtaata
     2161 atgatatttt aattgcttta agtggagcaa ccacaggaaa aatagcattt tgtgatactg
     2221 ataataaagc ttatatcaat caaagagttg ccattgttag aagtaaatta aaacttgtaa
     2281 aatattattt tttaactaga ggattttcat tacttattga gcttgcttgt aatggatctg
     2341 cacaaccaaa tatttcaacc aaagaaatag gggaatttaa aattccactt ccacccctaa
     2401 aagaacaaga gcaaattgca aattttttag atgaaaaatg caaaaaaata gcaaatttca
     2461 tagagaaaaa agaaaaactc atcacacttt taaaagaaca aaaacaagcc ctgataaatg
     2521 aaactatcac aaaaggactt gataaaaata taaatttcaa agatagtggc atagaatggc
     2581 ttggagaaat tccacaacat tggaggattg tgaaacttaa atatgtagct tttacaaaca
     2641 taggattggt ttatactcca gatgatatta ttgaaaatcc tgatgaagga tatccagttt
     2701 tgcgtgccaa taatattcaa aatggaaaaa tagattatca agatttaatt tatataaagt
     2761 ctaaacaaat tggaaaaaaa caaattatct ccagtggaga tttattaatg tgcgtcagaa
     2821 atggtagtga aaatctttta ggaaaaacag caaaaattca agatggatat ttttcttttg
     2881 gagcttttac agcaattatc aaaagtcaat ttaatgatta tttttattgg atttttcaaa
     2941 caaatatgtt aagaaaatct attgctagtt tttctgcttc aaatggaatt gggcaaattt
     3001 cacaagacga tattaaaaat tttattatat cttttccacc cctaaaagaa caagagcaaa
     3061 tcgcacaatt tttagattct gaaatttcta aaatagataa aattatagaa aaaaccaaaa
     3121 aacaaataaa actcataaaa gaatacaaaa ccacactcat aaaccaagcg gtttgtggta
     3181 ggattgattt ataaaaggag aaatatggaa gaaaataatt tagaatatat aaaacaaaat
     3241 tttcaaattc attattattt tgatgataac tctcattcaa tgaatgcttt tgttcgtaa
//
LOCUS       DAPIWB010000103         3273 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.104, whole genome shotgun sequence.
ACCESSION   DAPIWB010000103 DAPIWB010000000
VERSION     DAPIWB010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3273)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3273)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3273
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.104"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            185..868
                     /locus_tag="RJ266_001609"
     CDS             185..868
                     /locus_tag="RJ266_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDV7355328.1"
                     /translation="MKTFISNHKNQSSFITLFVFTPLFFVFLYSKDFLHIQPNETIKE
                     NKFNMAIKHFVQNSSDMKPTQPTQTIQEPSNVQPKEPVQEIKKIKPRKEKPIAKPKKI
                     IPPANAKAISQPKKDTNMQQQTPQASSYQSVSLTSNSELLKEIKSAIDEALIYPRQAR
                     KMRMSGEVLVEFTWTKEKKLENLKILKPSKYDFLNKSALETIRIASKKFPQYEKTFHI
                     KIPLVYKLS"
     gene            complement(940..1386)
                     /locus_tag="RJ266_001610"
     CDS             complement(940..1386)
                     /locus_tag="RJ266_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDV7355329.1"
                     /translation="MKKDSYHKITSKLIQEFDLLAVEDLQIKNMCKRAKLKNIKAKSG
                     LNKSILNTSFYQFSQYLEYKAKHNGKFFIKVNPQYTSKTCSVCGNIKKNLMFKDRVYL
                     CEKCGNTLHRDINAANNILKRGLKSFGLGISLEDYKLKAFRIVSFS"
     gene            complement(1506..1769)
                     /locus_tag="RJ266_001611"
     CDS             complement(1506..1769)
                     /locus_tag="RJ266_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002890613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDV7355330.1"
                     /translation="MNTFFKMRYHRDLPNTYKFNQITIIKNHNKYYLAFSIIYDESNV
                     SLISSKDFDIKKAVDIDLNINEITLSSGELIATNSKLLSRAEY"
     gene            complement(2177..2293)
                     /locus_tag="RJ266_001612"
     CDS             complement(2177..2293)
                     /locus_tag="RJ266_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355331.1"
                     /translation="MLETLKKYAENQGIEDNYPKKKYITQKKKSPNGTKQCK"
BASE COUNT         1263 a          533 c          355 g         1122 t
ORIGIN      
        1 aagttttttt agagaagtaa atagcaaaaa ttaaatatct tttagataca agcttgatta
       61 tttgattgtt atttttctct gtgaaatttg tttcaaaatt tatcttttta aacaatttac
      121 catagaatgt gtttaagaaa taaagatatt taaatcaaaa aataaaatca taacggagta
      181 aaagatgaaa acatttataa gcaatcataa aaaccaatct tcttttatca ctttatttgt
      241 ttttacacct ttattttttg tttttcttta ttctaaagat tttttacaca tacaacccaa
      301 tgaaactatt aaagaaaata aatttaatat ggcaatcaaa cattttgtac aaaattcctc
      361 cgatatgaaa ccgacacaac ccacacaaac tatacaagag ccttcgaatg tgcaacccaa
      421 agaacctgtg caagaaataa aaaaaataaa accgagaaaa gaaaaaccta tcgctaaacc
      481 taaaaaaata atccctccag caaatgcaaa ggcaataagt caacccaaaa aagatacaaa
      541 catgcagcaa caaactccac aagccagctc ttaccaaagc gtatctttaa ctagcaatag
      601 tgagctttta aaagaaataa aatcagcaat cgatgaagcc ctaatctacc ctagacaagc
      661 tagaaaaatg cgtatgagtg gggaggttct tgtagaattt acctggacaa aagaaaagaa
      721 attagaaaat ttaaaaatac ttaagccttc aaaatatgat tttctaaata aaagtgcttt
      781 agaaactata cgcatagctt ctaaaaaatt tccacaatat gaaaaaactt ttcatataaa
      841 aataccattg gtatataaat taagctaaat ctttcacaat atactctatt tttaatacaa
      901 atcactccag ctttgctaac gcttagaagt agaagcttcc tagctaaagc taactattcg
      961 aaaggctttg agtttatagt cctcaaggct aattcctaac ccaaacgact ttaatccacg
     1021 ctttaagata ttatttgcag cattaatatc tctatgtaaa gtattgccac atttttcaca
     1081 aagatacact ctatctttaa acataagatt ttttttgata tttccacata cactacaagt
     1141 tttgcttgta tattgtggat tgacttttat aaagaatttg ccattatgct ttgctttata
     1201 ctctagatat tgagagaatt gatagaatga agtattaaga atagatttat ttaaaccact
     1261 tttagctttt atattcttta atttagctct tttacacata ttcttaattt gcaaatcttc
     1321 aactgctagc aagtcaaatt cttgtatgag ttttgaagtt atcttgtgat aactatcctt
     1381 tttgatattt gaactttttt catagatttt atttaatttt aattgtgttt tttgaaatta
     1441 tggcttaact ttgttttctc ttttttgttt ttaatattct cctgctttgt tttctttgca
     1501 atcttttaat attcagctct actaagtagc tttgagttag tagctattaa ctctccactg
     1561 cttaaggtaa tctcattgat atttaaatca atgtcaactg cttttttaat atcaaaatct
     1621 ttgctagata ttaaagaaac atttgattca tcataaatga tactaaaagc taaatagtat
     1681 ttattgtgat ttttgataat agtgatttga ttaaacttat aagtatttgg taaatctctg
     1741 tgataacgca ttttaaaaaa tgtattcata agtctaaata tcttaaactt agtagtatca
     1801 ctatctttga ttttgtaggc ttgattattc caattaaagc tttgctttgc aaatttagag
     1861 tttttaaatt tgggaaagcc tttgttttta tctctaattg cttgctctaa ggcacgagaa
     1921 gattaatcct tgcttgttgg gttacaacac ttttatagct taattctctt gcttttataa
     1981 ggctagtttt attgattatc tatcttactt gcctttaaat aactcctatc ttttttatct
     2041 aaattcttat ttttatccca ctgctcttgc tgtaaattta aacaaatatt ataggcttga
     2101 tatagatgaa acattgatga ttaataagct tttgttgttc tttgtttagg tagaattcta
     2161 tatttaaaac ctttggttat ttgcattgct ttgttccatt agggcttttt ttcttttggg
     2221 ttatatattt tttcttaggg taattatctt ctatgccttg attttctgca tattttttaa
     2281 gagtttctag cattattccg cataggtatt ctataaaaaa ttactgatta tgtcaaatac
     2341 ctaactagag ccgtacaact aacactgtaa gcaattcatc tcccacttaa gaagtgagag
     2401 ttttattgaa taaaaaaaga taaatttaaa gcaagtaatc tttttttaga caacactaaa
     2461 cccttgcatg tatttacagc aatatttatt tcatcataaa caacccccaa cccataaaac
     2521 ctcaataaac actataaaat aaaagtattg gtaaagaaca agcaaacaat aaatctcaat
     2581 cacccagaca aaaacaatct caaccgaccc ataaagcaat aaatcaagca agcataatta
     2641 atttaattga ttaaactaat aaatttaatt tataagatta acaataaaaa accataaatt
     2701 aaccaagcta atcccaccca aacccaaaca agccataaat tacacacact tttttacaaa
     2761 catcaattaa atagcaagac tatcgatgat aaaaaattta tctcaagtat aacattcatt
     2821 ctcgccaaca agaatagaca atcatagtct atccacccta acccaacatt aacccctaac
     2881 ccaaccaaga agtgtataac aaccccaacc cataaacctc aataaacact ataaaataaa
     2941 cttgagtgat taaaaatcca acccaattat tgaataaacc caacctacat aataaaatat
     3001 aaactagaca tataaagaac aattgacaca taaaaataga ttgaataaat aaacctatac
     3061 aagtaaacat aaagattaat tattgataca aaagattcaa taaataaaaa gaataattga
     3121 gatataaaaa catataaact aaacaactca aacaaccatt aaatcaaccc aagctaatta
     3181 aacctataaa cataaaaaaa taattaaata caaaaacaac gattgacata taaaaactaa
     3241 gattttaaat ctataagaat aagataaagt aga
//
LOCUS       DAPIWB010000104         2746 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.105, whole genome shotgun sequence.
ACCESSION   DAPIWB010000104 DAPIWB010000000
VERSION     DAPIWB010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2746
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.105"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(156..911)
                     /locus_tag="RJ266_001613"
     CDS             complement(156..911)
                     /locus_tag="RJ266_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002928145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HDV7355332.1"
                     /translation="MQLRQKAREIFEKLLGEVKKDQLFASDKEYFINHINFTFGESFV
                     KANLDTQKYFLIALASTLAVGGKIEFKALLQGAIKNDISPIVIKEVIYQATPYVGFAR
                     VCDFLSLCNKVFKKLNIALVLTPQGTTTQENRKIKGREIQNAIFSEANITKMIETTPE
                     DKAFINDFLSANCFGDYYTRMGLDLKTRELLTLVYLISLGGLDNQVKAHIQGNLNMGQ
                     SRKDLLNVIAALIPYIGYLKALNAIAVLDSLTL"
     gene            complement(1019..1438)
                     /locus_tag="RJ266_001614"
     CDS             complement(1019..1438)
                     /locus_tag="RJ266_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HDV7355333.1"
                     /translation="MQELEKAGIHGSFKGDSKFFSKNVKVSMMFKSNEWRNFSGALVE
                     FEVSARSAWHTHPQGQTLIVTEGEIITKVPGQKAFIAKKGDVISCPIGVKHFHGATNT
                     SSGAHIALTGEKEGKNVEWLELVSDEEYENALKEARE"
     gene            complement(1496..2671)
                     /locus_tag="RJ266_001615"
     CDS             complement(1496..2671)
                     /locus_tag="RJ266_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7355334.1"
                     /translation="MKNLNKASNAQIILVFCLGVFGILSTELGMMGIIPIVSQNFSVS
                     ISDAGWCVSIFALVITFCAPIVPLLCANFNPKKLMLICLAVFILSSLTSAFVGEFWQL
                     LILRAIPAFFHPIYIALALSMVTNLVEDKKEIPKATAKIFAAVSAGMVLGVPMTSYFG
                     GNFSFKMAMLFFVFLNTLSFIATLFFVPDFKKVNSVKISKQLLILRYPLLWISILCVI
                     CINAGIWGFYSYFSDFLHSVGKMNFTLISIVLAIYGFSNIIGNYIAGKTLVKNANFTL
                     ILTPLIMIGFYILLFSFYSEIILIIFAFILGILAGVMNNGTHFMISYPFPKAANFSNG
                     LFISVANIGLSTGTAICGFVISLSDTRYIIVNTIVLLILGIIMIFVRSRIEKMKLRF"
BASE COUNT          981 a          487 c          336 g          942 t
ORIGIN      
        1 gcaatttcat aattgcttct ttccttttca agctttttta tcaattcttg gcattcttgt
       61 aatctttttt cttttatatt caataaagtt ttaaagtcca ttttttaatc ctttcattca
      121 ataaaaatgc aacataaatt tttaacataa aaaaattata aagtcaagct atctaacaca
      181 gcaattgcat ttaaagcctt tagataaccg atatatggaa taagagctgc aataacattt
      241 agcaaatctt ttctactttg ccccatgtta agattgcctt gtatgtgagc ttttacttga
      301 ttgtctagcc caccaagtga gataagatat acaagggtta aaagctctct agtttttaga
      361 tcaagtccca tgcgtgtata gtagtctcca aaacaattcg cactcaaaaa atcatttata
      421 aaagctttat cttctggtgt agtttctatc attttagtga tattggcttc actaaaaata
      481 gcattttgta tttccctgcc ttttattttg cgattttctt gcgtagtagt accttgtgga
      541 gttaaaacta aggcgatatt tagtttttta aacactttat tgcaaaggct taaaaaatca
      601 catactctag caaaacccac ataaggcgta gcttgataaa tcacttcttt aatgacaata
      661 ggacttatat cgttcttgat tgcaccttga agtaaagctt taaactctat ttttccacct
      721 actgctaaag tagaagcaag ggcgattaaa aaatattttt gtgtatccaa atttgctttt
      781 acaaaactct cgccaaaagt aaaatttatg tgattgataa aatactcctt atcacttgca
      841 aaaagttgat ccttttttac ttctcctaag agtttttcaa aaatttctct tgctttttgt
      901 cttaattgca tggttttatc ctttgtgatt tttaaagttt ataaaaaaga gcatttaaaa
      961 tactccaaaa aaacataaaa gtttttataa aatttttatg ttttatttac aaatttcttt
     1021 actctcttgc ttcttttaag gcattttcat attcttcatc gctaacaagc tcaagccatt
     1081 ctacattttt accctctttc tcgcctgtaa gtgctatgtg tgctccacta cttgtattag
     1141 ttgcaccatg aaaatgcttt actcctatag gacagcttat gacatcgcct tttttagcta
     1201 taaaggcttt ttggcctgga acttttgtga tgatttcacc ctctgttacg attaaggttt
     1261 gtccttgagg atgagtatgc catgcacttc tagcactgac ttcaaattca actaaagccc
     1321 cactaaaatt tctccactca tttgatttaa acatcataga aacttttaca tttttgctaa
     1381 aaaatttact atcaccttta aaacttccat gaattcctgc tttttctaat tcttgcattt
     1441 tacctccttt tttagtatta taaaacatga gagctactct aagtcaagta aaaatttaaa
     1501 atcttaattt cattttttct atcctacttc ttacaaaaat catgataatt cctaaaatca
     1561 acaaaacaat agtatttacg ataatataac gcgtatcgct caaagaaatc acaaatccac
     1621 aaatagcagt tccggtgctt aatcctatat tggctacact tataaaaagt ccattgctaa
     1681 aattagcagc ctttggaaag ggataactta tcataaaatg cgtgccgtta ttcatcacac
     1741 ctgctaaaat tcctaatata aaggcaaata ttataagtat aatttcacta taaaaactaa
     1801 aaagtaaaat ataaaatcct atcataatta aaggtgttaa aatcaaagta aaatttgcgt
     1861 ttttaacaag ggtctttccg gctatataat tgcctataat atttgaaaaa ccataaatag
     1921 ccaatacaat actaattaaa gtaaaattca tctttcctac actatgtaag aaatcagaaa
     1981 aataagagta aaaaccccaa attccagcgt ttatacaaat aacacaaagt atgctaatcc
     2041 ataaaagcgg gtatcttaaa ataagcaatt gtttgcttat ttttacagaa tttacttttt
     2101 taaaatcagg aacaaaaaat aaagttgcta taaaagataa ggtatttaaa aatacaaaaa
     2161 ataacattgc cattttaaaa ctaaaatttc caccaaaata actagtcata ggtacaccca
     2221 aaaccattcc agcactaact gctgcaaaaa tcttagctgt agcttttgga atttctttct
     2281 tatcttcgac caaatttgta accatactta gagcaagagc tatataaata ggatgaaaaa
     2341 aagcaggaat agctcttaaa ataagcaatt gccaaaattc acccacaaaa gcggaagtta
     2401 acgagcttaa gataaacaca gctaaacaaa taagcataag ttttttagga ttgaaatttg
     2461 cacaaagtag cgggacaata ggggcgcaaa aagttatcac gagtgcaaaa atactcacac
     2521 accaacccgc atctgaaata cttacactga aattttgaga aacaatagga attataccca
     2581 tcatccctag ttctgtgctc aaaatcccaa atacccctaa acaaaatact agaataattt
     2641 gagcatttga agctttattt aaatttttca ttttatcctt tcaattaata tttttaaaag
     2701 tataaaagat gagagtaggt ctaagtcaat aacctaaaat aaaaat
//
LOCUS       DAPIWB010000105         2634 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.106, whole genome shotgun sequence.
ACCESSION   DAPIWB010000105 DAPIWB010000000
VERSION     DAPIWB010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2634)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2634)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2634
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.106"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            16..1440
                     /locus_tag="RJ266_001616"
     CDS             16..1440
                     /locus_tag="RJ266_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HDV7355335.1"
                     /translation="MKKLTNDFGNIIADNQNSLSAGAKGPLLMQDYLLLEKLAHQNRE
                     RIPERTVHAKGSGAYGEIKITADLSAYTKAKIFQKGEVTPLFLRFSTVAGEAGAADAE
                     RDVRGFAIKFYTKEGNWDLVGNNTPTFFIRDAYKFPDFIHTQKRDPRTHLRSNNAAWD
                     FWSLCPESLHQVTILMSDRGIPASYRHMHGFGSHTYSFINDKNERFWVKFHFKTQQGI
                     KNLTNQEAAELIAKDRESHQRDLYNAIENKDFPKWKVQVQILAEKDIEKLGFNPFDLT
                     KIWPHSFVPLMDIGEMILNKNPQNYFNEVEQAAFSPSNIVPGIGFSPDKMLQARIFSY
                     PDAQRYRIGTNYHLLPVNRAKSEVNTYNVAGAMNFDSYKNDAAYYEPNSYDNSPKEDK
                     SYLEPDLVLEGVAQRYAPLDNDFYTQPRALFNLMNDDQKTQLFHNIAASMEGVDEKII
                     TRALKHFEKISPDYAKGIKKALEK"
     gene            1497..1967
                     /locus_tag="RJ266_001617"
     CDS             1497..1967
                     /locus_tag="RJ266_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj1386 family hemin-binding protein"
                     /protein_id="HDV7355336.1"
                     /translation="MTTLSLEEEKRFEELCKMAFNFARNNEYENLKIMIEAGLNVNLK
                     THKGDSLLMLAAYNNSYESAKMLLEKGAKVDEKNDRGQTPLAGVCFKGYLPMCELLVK
                     YGANIDENNGLGMTPYTFAIMFGRKDVAEFLLKKSKNNFLKKMSLKILKFIKKF"
     gene            complement(1968..2624)
                     /locus_tag="RJ266_001618"
     CDS             complement(1968..2624)
                     /locus_tag="RJ266_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDV7355337.1"
                     /translation="MDEGQKQQFIKLTYFLGEVLGEQYEIVFHVITEDGAYIAAIANN
                     HISGRSLDSPLTAFASELMQNKKYLEKDFLCDYKALVGKSKLIRGSTFFIKNHDKLVG
                     ILCINHDTSIMRDLICKMIDLEKIGDMGDILGNISFSQNDSSIETLSHSIEDILVQSV
                     DSSYLNSDYQLSIAQKEEIAEKLYEKGIFNIKGAVPIVAKFLKISEPSVYRYLKKFKK
                     "
BASE COUNT          986 a          409 c          401 g          838 t
ORIGIN      
        1 atttaggaga aaacaatgaa aaaattgact aacgattttg gaaacattat agctgataac
       61 caaaattcat taagcgcagg cgcaaaagga cctttactta tgcaagatta tcttttgctt
      121 gaaaaacttg ctcatcaaaa tagagaaaga attccagaaa gaaccgttca tgctaaggga
      181 agtggagctt atggcgaaat aaaaattaca gcagacttaa gtgcttatac caaagctaaa
      241 atttttcaaa aaggcgaagt tactccatta tttttacgct tttcaacagt agcaggtgaa
      301 gcaggtgcag cagatgctga acgcgatgtg agaggttttg ctattaaatt ttacactaaa
      361 gaaggaaact gggacttggt aggaaataac actccgacat tcttcatccg cgatgcttat
      421 aaattccctg atttcatcca tactcaaaaa agagatccaa gaactcatct aagaagtaat
      481 aatgctgctt gggatttttg gagtttatgt cctgaaagtt tacatcaagt aaccattctt
      541 atgagcgata gaggaattcc tgcaagttat cgtcatatgc atggatttgg aagccatact
      601 tatagtttta ttaatgataa aaatgaaaga ttttgggtga aattccattt taaaacccaa
      661 caagggatta aaaatcttac caaccaagaa gctgccgagc ttatagcaaa agatagagaa
      721 agtcatcaaa gagatctcta taatgctata gaaaataaag attttccaaa atggaaagtt
      781 caagttcaaa ttcttgctga aaaagatata gaaaaacttg gatttaatcc ttttgattta
      841 acaaaaattt ggcctcatag ttttgtacct ttgatggata taggcgaaat gattctaaac
      901 aaaaatcctc aaaattattt taatgaagtt gaacaagctg cctttagtcc aagcaatatc
      961 gttcctggaa ttggctttag ccctgataaa atgttgcaag ctagaatttt ttcatatcct
     1021 gatgcacaaa gatatagaat aggaactaat tatcatcttt taccagtaaa tcgtgcaaaa
     1081 agcgaagtga atacttacaa tgtcgctggt gctatgaatt ttgatagtta taaaaatgat
     1141 gctgcttatt atgaaccaaa cagctatgat aatagcccaa aagaagacaa aagctatctt
     1201 gaacctgatt tagtcttaga aggcgtagca caaagatatg ctccactaga taatgacttt
     1261 tatactcaac caagagcttt atttaatctt atgaatgatg atcaaaaaac tcaacttttt
     1321 cataatatcg ccgcttctat ggaaggagtt gatgaaaaaa ttatcactag agctttaaaa
     1381 cattttgaaa aaatttcacc tgattatgca aaaggaatta aaaaagcttt agaaaaataa
     1441 tttttacttg ccacttttgg tggcaaacta aagattataa taattaagga aaaacaatga
     1501 caactcttag tttagaagaa gaaaaaagat ttgaagagct ttgtaaaatg gcttttaatt
     1561 ttgcaagaaa taatgaatat gaaaatctta aaatcatgat agaagcaggt ttaaatgtaa
     1621 atttaaaaac ccataaaggc gatagcttgc ttatgcttgc agcttataat aattcttatg
     1681 aaagcgctaa aatgctttta gaaaaaggtg caaaagtaga tgaaaaaaac gatcgtggac
     1741 aaaccccatt agcgggagtt tgttttaaag gatacttacc tatgtgtgaa cttttagtta
     1801 aatatggagc aaatattgac gaaaacaatg gtttaggaat gacaccttat acctttgcta
     1861 ttatgtttgg acgcaaagat gtggcagaat ttttactcaa aaaatctaaa aataattttt
     1921 taaagaaaat gagcctaaaa atactaaaat ttatcaaaaa attttagtta ttttttaaat
     1981 ttcttcagat acctataaac actaggttct gaaattttta aaaattttgc tacgatagga
     2041 accgctcctt ttatattaaa aatacctttt tcatatagct tttcagcaat ttcttctttt
     2101 tgagcaatgc ttaattgata atcagaattt aaataactag aatctacact ttgaactaaa
     2161 atatcctcta tcgagtgact taatgtttct atgcttgaat cattttgaga aaaactaata
     2221 tttcctaaaa tatcacccat atctccaatt ttttctaaat caatcatctt gcatattaaa
     2281 tctctcataa tgctagtatc atgattgata cacaaaatac ctactaattt gtcatgattt
     2341 ttaataaaaa aagtagatcc tctaattaat tttgattttc caacaagagc cttataatca
     2401 cataaaaaat ctttttctaa atatttttta ttttgcataa gctcacttgc aaaagcagtc
     2461 aagggagaat ctaaacttct cccactaatg tgattgttag caattgccgc aatataggcc
     2521 ccatcttcag taattacatg aaaaactatc tcatattgct cacctaaaac ttctcctaaa
     2581 aaatatgtca actttataaa ttgttgtttt tgtccctcat ccataaaact gcct
//
LOCUS       DAPIWB010000106         2622 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.107, whole genome shotgun sequence.
ACCESSION   DAPIWB010000106 DAPIWB010000000
VERSION     DAPIWB010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2622)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2622)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2622
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.107"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(202..1554)
                     /locus_tag="RJ266_001619"
     CDS             complement(202..1554)
                     /locus_tag="RJ266_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002870914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HDV7355338.1"
                     /translation="MHNLNFSHPFLNKLIAYKDLNCLVYKDKTYSYLELLLEVEKYIG
                     QLNNLKGIIGILGDYNLKSIALLLACIEKRLIVAPFLKLKNQDFKELEDKIYEGQIDY
                     LYDEGRFIPYQSKQLKHNLIYTLQNHSSSGLILFSSGSTGKPKAMVHNLDVILNVYQG
                     KKPKVMNIVLFLMFDHIGGLNTLFNVLGMGACGIALEDRKNIEALAQNIQKYQVSLLP
                     ASPSLLNLILMSGVKEKYDLNSLKLITYGTEKMSDSLLNRLKLEFPKVRFHQTFGTSE
                     VGIAQTKTKDNMIKLEGMAYKIINNELYLKSKTQSLGYLNADNSVFDEEGYFATGDLV
                     ELYKENGEEYIKIIGRSKELINVGGEKVVPQEVEGVILELDYIQDCLVYAKANTITGQ
                     SVCVEVLLKPNIEFTNLELKKQLRMYCKDKLANYKIPTQVEIVDGLELSQRFKKVRKG
                     "
     gene            complement(1547..2278)
                     /locus_tag="RJ266_001620"
     CDS             complement(1547..2278)
                     /locus_tag="RJ266_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002909439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDV7355339.1"
                     /translation="MQKVILITGTRKGIGKQLSEHYLSLGHTVCGCSRGASSINHINY
                     RHFELDVSDEEKVVSMVRAVRKEFSRIDVLLNNAGIASMNHILTTPYKSVNNIFNTNV
                     FGTFLFTREVAKVMGNIYKKNYKNTKTMPFRIVNFTTVATPLRLEGEAIYAASKAALV
                     NLTQVCAKELSEFGITVNAVGPTPVPTDLIKNVPQNKLDVLLNQQAIKRFGEFEDVLN
                     VIEFFLNEKSGFITSQVVYLGGVNA"
     gene            complement(2280..2573)
                     /locus_tag="RJ266_001621"
     CDS             complement(2280..2573)
                     /locus_tag="RJ266_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002870916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355340.1"
                     /translation="MEEKIISIILNVLKNSADDYEIEELKSANKDTKLYSGLGGLLDS
                     LALVSLITDLEESLATELNIEITLADEKMMSLRNSPFKDVQTLAQYIASQIKA"
BASE COUNT          909 a          440 c          290 g          983 t
ORIGIN      
        1 ccttatttaa aacccttgcc tttagttttt tgcatagatt atatcgaagc actaaaaatt
       61 aaaaagcatt tatcatatag atatggtaag attgtgctct attgttttaa atattggtat
      121 aaaggtaaaa tatttgctat tccttatctt ttgttaaaag aatataaaga atttaaaaaa
      181 aataaaaaat aatcttacat tttaaccctt cctcaccttc ttaaaccttt ggcttaattc
      241 taatccatct acaatctcaa cttgagttgg gattttataa ttagccaatt tatctttaca
      301 atacattctt aattgttttt tgagttcaag gtttgtaaat tctatatttg gttttaaaag
      361 cacctctaca caaacacttt gtcctgtaat agtattagct tttgcataca ctaagcaatc
      421 ttgtatatag tcaagttcta aaatcacccc ttcaacttct tgagggacaa ctttctctcc
      481 tcctacattt ataagctctt tgcttcttcc tatgattttt atatattctt ctccattttc
      541 tttataaagc tcaactaaat ctcctgttgc aaaatacccc tcttcatcaa atacactatt
      601 atcagcattt aaataaccta agctttgggt tttacttttt aagtaaagct cattattaat
      661 aatcttataa gccatacctt ctaatttaat catattatct ttagttttag tttgagctat
      721 accaacttca cttgtgccaa atgtttgatg aaatctaact ttaggaaatt ccaattttaa
      781 gcgattaagt aaagaatcac tcattttttc tgtcccatat gtaataagtt ttaaagaatt
      841 taaatcatac ttttctttta ctccactcat tagtataaga tttagtaaac ttggacttgc
      901 aggcagtaaa gaaacttggt atttttgtat attttgcgct aaagcttcaa tattctttct
      961 gtcttctaaa gctataccac aagcacccat acctaaaaca ttaaataaag tatttaaacc
     1021 accaatatga tcaaacatta aaaacaaaac aatattcata accttaggtt ttttaccttg
     1081 ataaacattt aaaataacat caagattatg aaccatagct ttaggttttc cagtgcttcc
     1141 acttgaaaaa agaatcaaac cactagatga atgattttga agagtataga taagattatg
     1201 ttttaactgc ttactttgat aaggtataaa cctaccttca tcataaagat aatctatttg
     1261 cccctcatag attttatctt ctaattcttt aaaatcttga ttttttaatt ttaaaaaagg
     1321 agcaacaatt aatctttttt ctatacaagc taacaataaa gctatacttt ttaagttgta
     1381 atctcctaaa attccaataa tgccttttaa attatttaat tgaccaatat atttctcaac
     1441 ttctagtaaa agttccaaat aagaataagt tttatcttta taaactaaac aatttaaatc
     1501 tttataagct ataagtttgt ttaaaaaagg atgagaaaaa tttaaattat gcattaactc
     1561 cacccaaata aactacttgc gaggttataa aaccactttt ttcattaaga aaaaactcaa
     1621 tgacatttaa cacatcttca aattccccaa agcgtttaat ggcttgctga tttaataaaa
     1681 catcgagttt attttgagga acatttttaa ttaaatccgt tggaacaggt gtaggaccaa
     1741 cagcatttac agtaatacca aattcactta attctttagc gcacacttga gttaaattaa
     1801 ctaaagcagc tttagatgct gcatatatgg cttcaccttc gagtcttaaa ggagtggcaa
     1861 cagtagtaaa attaactata cgaaaaggca tggtttttgt gtttttataa ttttttttat
     1921 aaatattgcc cataacttta gcaacttctc ttgtaaataa aaaagtacca aaaacattgg
     1981 tattgaaaat attattaacg cttttataag gcgtggttaa aatatgattc atagaagcaa
     2041 tgcctgcatt atttaacaat acatctatac gagaaaattc tttacgcaca gcacgaacca
     2101 tagaaactac tttttcttca tcgcttacat caagctcaaa atgtctataa tttatatgat
     2161 ttatacttga agcacctcta gaacatccac aaactgtatg acctaaagaa agataatgct
     2221 cgcttaattg tttacctata ccttttcttg ttcctgttat aagaatgact ttttgcattc
     2281 tatgccttaa tttgacttgc tatatattga gctagtgttt gaacatcttt aaaaggagag
     2341 tttctcaaac tcatcatttt ttcatctgca agagttattt ctatattaag ttctgtagct
     2401 aaactttcct ctaaatctgt aattaagcta acaagagcta aagagtctaa aagacctcct
     2461 aatccgctat aaagtttagt atccttattg gctgatttta attcttctat ttcataatca
     2521 tcagctgaat tttttaaaac atttaaaatt atagaaatta ttttttcttc cataaaaatt
     2581 ttctccttga tatcaaagat aatttctata ttatagatct at
//
LOCUS       DAPIWB010000107         2576 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.108, whole genome shotgun sequence.
ACCESSION   DAPIWB010000107 DAPIWB010000000
VERSION     DAPIWB010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2576)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2576)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2576
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.108"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..1353
                     /locus_tag="RJ266_001622"
     CDS             <1..1353
                     /locus_tag="RJ266_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002909437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HDV7355341.1"
                     /translation="FNSFLFLHKMGFLHCFKKEKVLIDKVFIEQIDDKNDEILIKFYT
                     ADVNDEIKMLFDDRLAKIICSKIRQYDFLNRVFIYERRIWLKFFIDAKNMICFINDKK
                     VDIIYQEKRCTSYNISYEIKKLKKRRAKNKSLWLFADMPFRADDNAEHLYRYVMKNYP
                     EKNIAFVLRKNSHDYKRLKKEGFKLVDPKSFKFKYLVFKADKLISSHIERYFFEALGE
                     NTLKTKDFVFLQHGITQNDLSSWLNQRKIDLFITGMQDEYDSIAGDFNRYKFTPKEVK
                     LTGFPRWDALLKNNKIKTKQILIMPTWREYIVGSYSKKLMKRRFNPKFYESEYFYRWD
                     SFLHSKKLQELHEKYNYKIVFSPHPQIRPYLEGFNLPNYIIIPSVEMSMQKLFCESSL
                     MITDYSSVAFEMAVLKKPVIYYQFDKDEFFAKHTVQKKYFDYKKDKFGKVFTNKVNIC
                     "
     gene            1394..>2576
                     /locus_tag="RJ266_001623"
     CDS             1394..>2576
                     /locus_tag="RJ266_001623"
                     /inference="COORDINATES: protein motif:HMM:NF013652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HDV7355342.1"
                     /translation="MFHIVFGCNESYVKYLSVLITSIMKNINSQKTFLDVYKEANILP
                     KIDINSLESREGFIFHILIDSIQEKTSIKLDQMIKHLSRENDYPAEIKLHIMDAELFK
                     EMDVPIWVKHYATYFRLYLGSILPENCEKCLYLDVDMLVFSDLRELFCLDLQDYIIAA
                     SPDIKQWPGSLFVGKSKKDNVRDLIIEKGPLYFNAGFMLINLKQWRLESLEKRMVNVA
                     NSYTFEVGDQDILNYVINKKVIILPCKWNFIAGHFILDRKGIFNDFKGEGNQPYWYYT
                     REEMKKNLQNLSILHYTHYVVKPWESYYTEFDVNYYPVHYDYYDEWWYVAFNTPFFNK
                     ELIKLNKMIKNKELENYSKTLAFVLNYKMGNIASIRIRNHLAYKIGNLILDTKQFNKI
                     LK"
BASE COUNT          976 a          235 c          408 g          957 t
ORIGIN      
        1 tttaattctt ttttgttttt acacaaaatg ggatttttgc attgttttaa aaaagaaaaa
       61 gtgcttatag acaaagtttt tatcgagcaa atagatgata aaaatgatga aattttaatt
      121 aaattttata cggcagatgt taacgatgaa attaaaatgc tttttgacga tagattagcc
      181 aaaatcattt gttcaaaaat cagacagtat gattttttaa accgagtttt tatctatgaa
      241 agaagaattt ggcttaaatt ttttatagat gctaaaaata tgatttgttt tattaacgat
      301 aaaaaggttg atataatcta tcaagaaaaa agatgtactt cttataatat ttcttatgag
      361 attaaaaaat taaaaaaaag aagggctaag aataaatcat tatggctttt tgctgatatg
      421 ccttttagag ccgatgataa tgctgaacat ttatatcgct atgttatgaa aaattatcct
      481 gagaaaaata tcgcctttgt ccttagaaaa aattctcatg attataaaag actaaaaaaa
      541 gaaggtttta aactggttga tccaaaaagt tttaaattta aatatttggt ttttaaggct
      601 gataaactca tttcatcgca tattgagagg tatttttttg aagccttggg ggaaaatact
      661 ttaaaaacta aagattttgt atttttgcaa catggaatta ctcagaatga tttatcttct
      721 tggttgaatc aaagaaaaat tgatttattt attactggaa tgcaagatga atatgattct
      781 atagcaggag attttaatcg ttataaattt actcctaaag aggtaaaatt aacgggattt
      841 cctagatggg atgctttgct taaaaataat aaaataaaga ctaaacaaat tcttattatg
      901 cctacttgga gagaatatat agtaggttct tatagtaaaa aattaatgaa aagaagattt
      961 aatccaaaat tttatgaaag tgagtatttt tatagatggg attctttttt acacagtaaa
     1021 aaattacaag aattacatga aaaatataat tacaaaatag tttttagtcc tcatccacaa
     1081 attagacctt atttggaagg ttttaattta ccaaattaca ttataatacc ttctgttgaa
     1141 atgagtatgc aaaagctttt ttgtgaatca tctttaatga taacggatta ttcaagtgtg
     1201 gcttttgaga tggctgtttt aaaaaagccc gtgatttatt atcaatttga taaagatgaa
     1261 ttttttgcaa agcatactgt gcaaaaaaaa tattttgatt ataagaaaga taagtttggg
     1321 aaagttttta ctaataaggt taatatttgt taatttttag agttttaaat atataaattg
     1381 tgagggttta tttatgtttc atattgtttt tggttgtaat gaatcttatg tgaaatattt
     1441 gtcagtttta attacaagta tcatgaaaaa tattaatagt caaaaaactt ttcttgatgt
     1501 ttataaagaa gctaatatat tgccaaagat tgatataaat tctctcgagt caagagaagg
     1561 gtttatattt catattttaa ttgattctat acaagaaaaa acttctataa agcttgatca
     1621 aatgattaaa catttaagta gagaaaatga ttatcctgcg gaaattaaat tacacataat
     1681 ggatgctgag ttgtttaaag agatggatgt tcctatttgg gtaaagcatt atgctaccta
     1741 ttttaggtta tatttaggga gtattttgcc tgaaaattgt gaaaaatgtt tgtacttaga
     1801 tgtagatatg cttgtttttt ctgatttgag agaattattt tgtttggatt tacaagatta
     1861 tattattgca gcatctccag atataaaaca atggccagga agtttatttg tagggaaatc
     1921 aaaaaaagat aatgttagag atttgattat tgaaaaaggt cctctttatt ttaatgctgg
     1981 ttttatgtta atcaatttaa aacagtggag attagaatct ttagaaaaaa gaatggtaaa
     2041 tgttgcaaat tcatacacat ttgaagttgg agatcaggat attttaaatt atgttattaa
     2101 taaaaaagta ataatacttc cttgtaaatg gaattttata gctggtcatt ttattttaga
     2161 tagaaaaggt atttttaatg attttaaagg agaaggaaat cagccatatt ggtattatac
     2221 aagagaagaa atgaaaaaaa atttacaaaa tttatctatt cttcattata ctcattatgt
     2281 tgtaaagcct tgggagagct attatacgga atttgatgta aattactatc cggtacatta
     2341 tgattactat gatgaatggt ggtatgttgc ttttaatact ccttttttta ataaagagct
     2401 aattaaatta aataaaatga ttaaaaataa agagcttgaa aattattcca aaacattagc
     2461 ttttgtatta aattataaga tgggaaatat agcttcaatt aggattcgaa atcacttggc
     2521 ttataaaatt ggaaatttaa tattggatac taaacaattt aataaaatat taaaat
//
LOCUS       DAPIWB010000108         2381 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.109, whole genome shotgun sequence.
ACCESSION   DAPIWB010000108 DAPIWB010000000
VERSION     DAPIWB010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2381)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2381)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2381
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.109"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            2..940
                     /gene="rsmH"
                     /locus_tag="RJ266_001624"
     CDS             2..940
                     /gene="rsmH"
                     /locus_tag="RJ266_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HDV7355343.1"
                     /translation="MILEIPHIPVLLNEVQEIFKNLKTGYFLDCTLGFGGHSEALLKN
                     HPDLKFIACDQDQQALKFSKKRLKDFRNRITFMQSNFSEVLEKISHKEELKGILADIG
                     VSSFQLDNNERGFSVNSDFLDMRMNQNSKISAYEIINTYTKEQLTSIFKDYGELHDAH
                     FIAEKIFLERSKNPIKSAKELYQIIGKGKQNHRKISKATLAFQAIRIEVNQELKVLKD
                     FLEHLENLKPKNCILAIISFHSLEDRIVKQFFKKWSKNCICNEKIMRCECGNNHSLGQ
                     IITKKAISASKEELLKNSRSSCAKMRAFYFNNLDNK"
     gene            940..1878
                     /locus_tag="RJ266_001625"
     CDS             940..1878
                     /locus_tag="RJ266_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355344.1"
                     /translation="MLEDDFIKERQNIRQKMLKFSRAINQGKPLDDDLRDEISSDDIL
                     RRRFKKKTPNKFLEELDEEYESKHTKKSNIYLKEDLINVKLEEKQSLAKKIFSKMKER
                     RKEENKKTKKNFLFSRKKANEIKNIQTKTQIQTKSNQATTQTKQEKKELTNSIEKIQK
                     TETKIQKPLIIEKKLDVKNQPNIKKSLENLQKKITPQENKQELPKPSNQAQEKQQNDE
                     DAQKAKNILLEGFSNATKEDRNLNFNHLLFAALLVSFALFLFAPQIYIRNQIYYLSRE
                     IATLRTEESVLNEENKDLKRRLENMRFQNQILDYLE"
     gene            complement(1866..2357)
                     /locus_tag="RJ266_001626"
     CDS             complement(1866..2357)
                     /locus_tag="RJ266_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355345.1"
                     /translation="MKKFKEFSLRFLFKVSEQPVLIRDLLEANALFNDGMLVDPSKLN
                     FNFKILNSYIYFGVFCAVILLPLLLITHYFLTKLDFHISIVSAVMVTACVFIGYDIFK
                     VYTRKIISKKIIQKAWALHFPYFAYEKYSTMAGEFYKEALKEEIPKANLEQYVLDKII
                     HSK"
BASE COUNT         1032 a          329 c          310 g          710 t
ORIGIN      
        1 attgattttg gaaattcctc atatcccagt tttacttaat gaagttcaag agatttttaa
       61 aaatcttaaa acaggttatt ttttagactg cactttagga tttggcggac atagtgaagc
      121 tttgcttaaa aatcatcctg atcttaaatt cattgcttgt gatcaagatc aacaagcttt
      181 aaaattttct aaaaaacgtc ttaaagattt tcgcaatagg ataactttta tgcaaagtaa
      241 ttttagtgaa gttttagaaa aaatttcaca taaagaagaa ttaaaaggta ttttagcaga
      301 cattggagtt tcttcatttc agcttgataa taacgaaaga ggttttagtg taaattctga
      361 ctttttggat atgagaatga atcaaaactc caaaatatca gcttatgaga ttattaatac
      421 ttatacaaaa gagcaattaa cttccatttt taaagattat ggagaattac atgatgcaca
      481 ttttattgct gaaaaaattt tcctagaaag aagtaaaaat ccaatcaaaa gcgccaaaga
      541 gctttatcaa atcataggaa aaggtaaaca aaatcataga aaaatttcca aagctacttt
      601 agcatttcaa gccattagaa tagaagtaaa tcaagaactt aaagtgctta aagattttct
      661 tgaacattta gaaaatttaa aaccaaaaaa ttgcatttta gctatcatta gctttcattc
      721 tttagaagat agaatagtaa aacaattttt caaaaaatgg tcaaaaaact gcatttgtaa
      781 tgaaaaaata atgcgttgcg aatgtggaaa taaccatagc ctaggacaaa taataactaa
      841 aaaagctata agtgcgagca aggaagaact tttaaaaaat tctcgctcta gttgtgctaa
      901 aatgcgggct ttttatttta ataatttgga caataaataa tgctagaaga tgattttata
      961 aaagaacgcc aaaacatacg ccaaaaaatg ctgaaatttt ctcgcgccat aaatcaaggc
     1021 aaaccgcttg atgatgattt aagagatgaa atttctagcg atgatatttt aagacgtcgt
     1081 tttaaaaaaa agactcctaa taaattctta gaagaactcg atgaagagta tgagtcaaaa
     1141 catactaaaa aatcaaatat atatttaaaa gaagatctaa tcaatgttaa attagaagaa
     1201 aagcaatctc ttgctaaaaa aattttttcc aaaatgaaag aaagaagaaa agaagaaaat
     1261 aaaaaaacta aaaaaaattt tttatttagc agaaaaaaag caaacgaaat aaaaaatatc
     1321 caaaccaaaa cacaaattca aacaaaaagc aatcaagcta ccactcaaac aaaacaagaa
     1381 aaaaaggaac ttacaaattc tatagaaaaa attcaaaaaa cagaaactaa aatacaaaaa
     1441 cctctaatta tagaaaaaaa actagatgtt aaaaatcaac ctaatatcaa gaaaagttta
     1501 gaaaatttac aaaaaaaaat aacaccacaa gaaaataaac aagaacttcc aaaaccatct
     1561 aatcaagctc aagaaaaaca acaaaatgat gaagatgctc aaaaggcaaa aaatatttta
     1621 ctagaaggct tctctaatgc taccaaagaa gatagaaacc taaacttcaa tcatcttctt
     1681 tttgcagctt tacttgttag ttttgcatta tttttatttg ccccacaaat ttatattaga
     1741 aatcaaattt attatcttag tagagagatt gctacattaa gaacagaaga aagtgtttta
     1801 aacgaggaaa ataaagactt aaaaagaaga cttgaaaata tgcgattcca aaatcaaatt
     1861 ttagattatt tagaatgaat aatcttatct aaaacatact gctctaaatt tgcttttgga
     1921 atttcttctt ttaaagcttc tttataaaat tcacccgcca ttgtagagta cttttcataa
     1981 gcaaaataag gaaagtgtaa agcccaggct ttttgtatta ttttttttga gattattttg
     2041 cgagtataaa ctttaaaaat atcatatcct ataaatacac aagcagtaac cataacagcg
     2101 ctcactatgc ttatatgaaa gtcaagcttt gttaaaaaat aatgagtaat caaaagcaat
     2161 ggcaataaaa tcacagcgca aaaaacacca aaataaatat aagaatttag aattttgaaa
     2221 ttaaaattta gcttagaagg atctacaagc attccatcgt taaaaagtgc atttgcctct
     2281 aataaatctc ttataagaac aggttgctct gatactttaa ataaaaaacg aaggctaaat
     2341 tctttaaatt ttttcataat ccacgcttta ttttttaatt a
//
LOCUS       DAPIWB010000109         2124 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.110, whole genome shotgun sequence.
ACCESSION   DAPIWB010000109 DAPIWB010000000
VERSION     DAPIWB010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2124)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2124)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2124
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.110"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            9..313
                     /locus_tag="RJ266_001627"
                     /pseudo
     CDS             9..313
                     /locus_tag="RJ266_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013326239.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
     gene            complement(321..752)
                     /locus_tag="RJ266_001628"
     CDS             complement(321..752)
                     /locus_tag="RJ266_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDV7355346.1"
                     /translation="MAYTIKKVEKETKISAHTLRFWAKKGLFPFVQKDENSVKYFSKS
                     DIEWVKWIEWLRISGMPIEQIKHYIKLCSLGIKTAKERQEMLKQTKKKLQNQIKTLKE
                     SEKVLSKKIKIYEEMLANEVDGFNPESKDYQPCDKLYKFKG"
     gene            832..>2124
                     /locus_tag="RJ266_001629"
     CDS             832..>2124
                     /locus_tag="RJ266_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HDV7355347.1"
                     /translation="MLKITKIKRKIMNSIKIKLSLIANLIAIFALIVLGIVSFYFTKT
                     SLYESTLKNQTDLLKVTQSTVEDFRSTNQSFTRALEKDIANLPYQSLITEENIINNVG
                     PILKYYRHSINALNVYLGLNNGKVLLSQKSNDAKMPELRDDLDIKTKDWYQEALKTND
                     IFVTPAYLDTVLKQYVITYSKAIYKDGKIIGVLGVDIPSEDLQNLVAKTPGNTFLFDQ
                     KNKIFAATNKELLNPSIDHSPVLNAYKLNGDNNFFSYKLNNEERLGACTKVFAYTACI
                     TESADIINKPIYKAAFIQAIVVIIVVVFSVILLYFIVSKYLSPLAAIQTGLTSFFDFI
                     NHKTKNVSTIEVKSNDEFGQISNAINENILATKRGLEQDNQAVKESVQTVSVVEGGNL
                     TARITANPRNPQLIELKNVLNKLLDVLQARVGSDMNAIH"
BASE COUNT          762 a          327 c          267 g          768 t
ORIGIN      
        1 ttttaaccat tatttcagca atcaatgatg aaagtaggat tttgatttta catcatcttt
       61 taagatacaa agaactttgt gtttgtgatc tacaagagct cttaaacatg ggtcaatcaa
      121 gactttcaag acatttaaaa attttaaaag atgccggttt ttgtatgtaa ggcgtcaagg
      181 aacttgggcg tattatggga ttaataatga gcttttaaag ctgcatttag atctttttga
      241 aaatatcaaa aatttagagc ttaaaaatgt tattaaaaaa aatgaaaata ttattaccca
      301 aatttgccct taatataaaa tcaaccctta aacttataca atttatcaca aggttgatag
      361 tccttgcttt ctggattaaa cccatcgact tcatttgcaa gcatttcttc ataaattttt
      421 atctttttgc ttaaaacttt ttcactttct tttaatgttt taatctggtt ttgtaatttt
      481 ttctttgttt gctttaacat ctcttgtctt tctttagcag tttttatacc caaagagcaa
      541 agttttatat aatgtttgat ttgttctatt ggcatacctg aaattctaag ccattctatc
      601 cattttaccc attctatatc gctttttgaa aaatatttca cactattttc atctttttga
      661 acaaaaggaa acaaaccttt tttagcccaa aatcttaaag tatgagcact aatttttgtt
      721 tctttttcta ctttttttat agtataagcc atattttctc ctttatttaa gataaaaata
      781 aaaatttatt ttattttttt gtgataaaat aatagccaaa ttattagttt tatgctaaaa
      841 ataacaaaga ttaaaaggaa aataatgaat agtattaaaa tcaaactttc cctcattgca
      901 aatttaattg caatttttgc cttaattgtt ctaggtattg taagttttta ttttacaaaa
      961 acctcactat atgaaagcac tcttaaaaat caaactgacc tacttaaagt cacacaatct
     1021 accgttgaag atttccgttc cacaaatcaa tcttttacta gagctttaga aaaagatatc
     1081 gcgaacttac cttatcaatc tttaatcact gaagaaaata ttattaacaa tgttggtcca
     1141 atattgaaat attatcgtca tagtataaat gcactaaatg tttatttagg tttaaacaat
     1201 ggaaaagttt tacttagtca aaaatctaat gatgcaaaaa tgcctgaatt acgtgatgat
     1261 ttagatataa agacaaaaga ttggtatcaa gaagctttaa aaacaaatga tatttttgtt
     1321 acaccagcat atttagatac agttttaaaa caatatgtaa taacgtattc taaagctatt
     1381 tataaagatg gtaaaatcat aggggtactg ggtgtcgata taccatcaga agatttgcaa
     1441 aatttagttg caaaaacccc tggaaatact tttttatttg atcaaaaaaa taaaatattt
     1501 gcagcaacca ataaagaatt attaaatcca tccattgatc actctcctgt tctaaatgca
     1561 tataaactca atggtgataa caacttcttc tcttataaat taaataatga agaaagactt
     1621 ggagcttgta ctaaagtctt tgcttataca gcttgtatta ccgaaagcgc tgatattata
     1681 aataaaccta tttataaagc tgcatttatt caagccattg ttgtcattat tgtagtagta
     1741 tttagcgtca tcctccttta tttcatcgta tcaaaatacc tctccccact tgcagctatc
     1801 caaacaggtt taacttcatt ctttgacttt atcaaccata aaacaaaaaa tgtttctact
     1861 atagaagtaa aaagcaatga tgaatttgga caaatctcaa atgctatcaa cgaaaacatt
     1921 cttgctacta aaagaggctt agaacaagac aatcaagccg ttaaagaatc agttcaaacc
     1981 gtatcagttg tagaaggtgg taatttaaca gcaagaatta ctgctaatcc aagaaaccca
     2041 cagcttattg aacttaaaaa tgttctaaat aaacttcttg atgttttaca agctagagta
     2101 ggttctgata tgaatgctat tcat
//
LOCUS       DAPIWB010000110         2061 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.111, whole genome shotgun sequence.
ACCESSION   DAPIWB010000110 DAPIWB010000000
VERSION     DAPIWB010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2061)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2061)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.111"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..156
                     /locus_tag="RJ266_001630"
     CDS             <1..156
                     /locus_tag="RJ266_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDV7355348.1"
                     /translation="VNVKAAESTIRDVDFAAESANFSKYNILAQSGSYAMSQANAVQQ
                     NVLKLLQ"
     gene            complement(187..>2061)
                     /locus_tag="RJ266_001631"
     CDS             complement(187..>2061)
                     /locus_tag="RJ266_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7355349.1"
                     /translation="NNFNKNLKALSGFEYNNLRKKLEDLKELREFTFTQGKDNLDINI
                     IKKRNLKKMYQDPIKELEKNLEYFKDFTRYPVLFFYGFGNGILYKILLQNQALKRIII
                     FEKELELIFLALNFIDFSKDLSLGRLIILHHDDINLPKMDKVFRLIGDLFYRSYNLHI
                     ANDFYEHYKEDILKLNKLNMQIIKNHNLMRGNDPKDALQGIEQFVYNLPQMITHPSYK
                     ELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYV
                     CMLERDEIVAECFNNDFKDFDKDIIFLVASLVHKKTISYLKKNKRKYILIIKGQPFAR
                     CLGLDDYGYINAGMSVSHMAYELAENLGHNNIILIGQDLAYAKDGQTHSQGFIHANLH
                     NGDYERDLDRFSTTAYGGNGKVQSSEIWTLFRQIFENFIAFSKSKTYNCTEGGARIES
                     AIEKPFKELCENLLENKKDKKFKKLQVLNTKEQVKLGLKIYQKIKKNMNLSLNFKKEC
                     KKVQKQIHNLTHGKNKLSLEQINQNIDKIKEKLSNKKYLFLQEILGPTLHHEQSILTP
                     LYLKDIKDESDKQNKLFAWIYAHESLIENIIELLEAQDKRLKIAILPLQDFLEKKKAL
                     "
BASE COUNT          667 a          295 c          290 g          809 t
ORIGIN      
        1 gtaaacgtta aagcagctga atcaaccata agagatgtag actttgcagc tgaaagtgca
       61 aatttttcta aatataacat ccttgcgcaa tcaggttctt atgctatgag tcaggctaat
      121 gcagtgcagc aaaatgtttt aaaacttctt caataatttc ttagatgctt ttatgcatct
      181 aagcttttaa agtgcttttt tcttttctaa aaagtcttgc aaaggtaaaa tagcgatttt
      241 aagtcttttg tcttgagctt ctaaaagttc tatgatattt tctatcaaag attcatgcgc
      301 ataaatccaa gcaaaaagtt tattttgttt atcagattca tctttgatat ctttaagata
      361 taaaggcgtt aatatacttt gttcatgatg taaagtaggg cctaaaattt cttgtaaaaa
      421 gagatatttt ttatttgaaa gtttttcttt gattttgtct atattctggt ttatttgttc
      481 aagagagagc ttgttttttc catgggtaag attgtgaatt tgtttttgaa cttttttaca
      541 ctctttttta aaatttaagg ataaattcat atttttttta attttttgat agatttttaa
      601 tccgagtttt acttgttctt tagtatttaa aacttgtaat tttttaaatt ttttatcttt
      661 tttattttcg agtaaatttt cgcaaagttc tttaaaaggt ttttctatag cgctttctat
      721 cctagcacct ccttcagtgc aattataagt tttacttttg ctaaaagcaa tgaaattttc
      781 aaaaatttgt ctaaaaagtg tccaaatttc agaactttga acttttccat ttcctccata
      841 agctgtagtg ctaaatctat ctaagtccct ttcatagtct ccattgtgta aattagcatg
      901 gatgaaacct tgagaatgtg tttgcccatc tttggcataa gctaaatcct gacctatgag
      961 aatgatgttg ttatgtccta aattttcagc cagttcataa gccatatgag atacactcat
     1021 gcctgcgtta atatatccat aatcgtctag ccccaagcat ctcgcaaaag gctggccttt
     1081 tatgattaaa atgtattttc ttttattttt tttaagataa gaaatggttt ttttatgcac
     1141 caaagaagct actagaaaaa tgatgtcttt atcaaaatct ttaaaatcat tgttaaaaca
     1201 ttcagctact atttcatcgc gttccaacat acaaacataa tcaggcttta taccatgttt
     1261 agctaaaata ggataagaag aatccgcaca aaaaatcgta gctttattag catacttttt
     1321 taataaagga agttgtttag taagagatgg tcccgtagaa acaatgatag ctgtatcact
     1381 tatacccttt cttttagaaa gtaattcttt ataactagga tgagtaatca tttgaggaag
     1441 attataaaca aattgttcta taccttgaag agcatcttta ggatcattac cacgcataag
     1501 attgtgattt ttgatgattt gcatgttgag tttattaagt tttaaaatat cttctttata
     1561 gtgttcataa aaatcattag caatgtgtag attataagaa cgataaaaca aatcccctat
     1621 caaacgaaaa actttatcca ttttaggaag attaatatca tcatgatgta aaataatgag
     1681 tcgccctaag cttaaatctt tgctaaaatc tatgaaattt aaggccaaaa agataagctc
     1741 taattctttt tcaaagatga ttattctttt aagtgcttga ttttgaagta gaattttata
     1801 taaaattcca tttccaaaac cataaaaaaa aagcacagga tagcgtgtaa aatctttaaa
     1861 atattctaaa tttttttcaa gctctttgat gggatcttga tacatttttt ttaaatttct
     1921 tttttttatg atattgatat caagattatc ttttccttga gtgaaagtaa attctctaag
     1981 ctcttttaga tcctcaagtt ttttgcgtaa gttgttatac tcaaaaccgc ttaaagcttt
     2041 taaatttttg ttaaaattat t
//
LOCUS       DAPIWB010000111         1973 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.112, whole genome shotgun sequence.
ACCESSION   DAPIWB010000111 DAPIWB010000000
VERSION     DAPIWB010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1973)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1973)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1973
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.112"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..687)
                     /locus_tag="RJ266_001632"
     CDS             complement(<1..687)
                     /locus_tag="RJ266_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7355350.1"
                     /translation="MLYKRKNIKFKNFVDLHKNLSLSKLFDFYSVFEGFEKLNILNFE
                     DDVFTNIERILFDDYLKIKSYFALDETSSYALTLLAKNNRKRFSINRKIQHFKALSTL
                     KYLLETGIIKLEYSKEAKKIKDKRQKIKKELRSYVVQDKIIFSNQFTRFFFYFLKPNE
                     KLILQNRYKEVLECIKEKFELYQSFCFEQLSRELLEKKFNINGVQSYWDKNLELDLYY
                     RDENLCFVGEV"
     gene            723..>1973
                     /locus_tag="RJ266_001633"
     CDS             723..>1973
                     /locus_tag="RJ266_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HDV7355351.1"
                     /translation="MYLQISDLKKELILKKGILHFDFTASALALKCVEKEISKILPTY
                     ANTHSDSSLNSFKTQQIYEQARKDIKKSLSLDENFALIACGTGSSSAIKKFQELIGIY
                     IPPLVKERYFTQIDKNTLPLVIVGPYEHHSNELSFREGLCECIRIPLDKNGEIDFDFL
                     EKTLQKNKKRKIIASFSLASNVTGILSDYKRISEMVRKFKGIVAFDASSFIPYKNISC
                     QYYDALFISSHKLIGGIGGSGLLAIKKDLCGNKPSFAAGGTVGYVSRTSQCYLCNEEA
                     LEEGGTPGILQLIRASLAFKIKDSIGIKNIEKKEEILKDYFFEKLKTIPNLILYAKNL
                     KTRLPIFAFNIKGISPFDIAYELSKKYHIETRAGCACAGPYGHDLLGLKDNQKLKTKP
                     GWLRISLHYTHEKEDIDYFFNALNK"
BASE COUNT          720 a          292 c          274 g          687 t
ORIGIN      
        1 aacttctccg acaaaacaca aattttcatc tcgataataa agatcaagtt ctaaattctt
       61 atcccagtaa ctttgcactc cattgatatt gaattttttc tcaagcaatt ctctagaaag
      121 ctgttcaaaa caaaaacttt gataaagttc aaatttttct ttaatgcatt ctaaaacttc
      181 tttataacga ttttgcaaaa taagcttttc attgggcttt aaaaaataaa aaaagaaacg
      241 agtaaattgg ttgctaaata taatcttatc ttggacaaca taagatctta gttctttttt
      301 gattttttgt cttttatctt ttattttttt agcttcctta ctatactcaa gttttattat
      361 acctgtttct aaaagatatt taagtgtaga taaagcttta aaatgctgaa tttttctatt
      421 gatagaaaaa cgcttgcgat tgtttttagc tagtaaagta agagcgtaag aacttgtttc
      481 atccaaggcg aaataacttt taatttttag ataatcatca aacaaaattc gctctatatt
      541 tgtaaataca tcgtcttcaa aatttaaaat gtttaatttt tcaaaacctt caaacacact
      601 ataaaaatca aaaagcttac ttaaagacaa attcttatgc aaatctacaa agttcttaaa
      661 ttttatattt ttccttttat aaagcatttt tatagtataa ttttagcaaa tttttataag
      721 gattgtattt gcaaatttca gatttaaaaa aagaattgat cttaaaaaaa ggtattttgc
      781 attttgactt cacagcaagt gctttagctc taaaatgtgt agaaaaagaa atttcaaaaa
      841 ttctcccaac ctatgcaaac acacattctg atagctcttt gaattctttt aaaactcaac
      901 aaatttacga acaagcaaga aaagatataa aaaaaagttt atcattagat gaaaattttg
      961 cccttatagc ctgcggaaca ggatcaagca gtgctattaa aaaatttcaa gaattgatcg
     1021 gcatttacat tccccctctt gtaaaagaaa gatattttac gcaaattgat aaaaatacct
     1081 tacctttagt tatcgtaggg ccttatgagc atcattctaa tgaactttca tttcgagaag
     1141 gcttgtgcga atgtattaga attcccttgg ataaaaatgg ggaaattgat tttgattttc
     1201 tagaaaaaac tttacaaaaa aacaaaaaaa gaaaaataat cgctagcttt tctttagctt
     1261 caaatgttac tgggatatta agtgattaca aacgcatttc tgaaatggtt cgtaaattta
     1321 aagggatagt tgcttttgat gcatctagtt tcattcccta taaaaacata tcttgtcaat
     1381 actatgatgc gttgtttata agttctcata aattaatcgg tggtattggc ggttctggac
     1441 ttttagctat caaaaaagat ctttgtggaa acaagcctag ctttgcagca ggtggaactg
     1501 tgggctatgt ttctcgcact tcacaatgct acctttgcaa tgaagaagct ttagaagaag
     1561 gaggaacacc tggaatttta caactcattc gcgctagctt agcttttaaa atcaaagatt
     1621 ctataggaat taaaaatata gaaaaaaaag aagaaattct aaaagattat ttttttgaaa
     1681 aactaaaaac tatacctaat ttaattttat acgcaaagaa tttaaaaacc cgattgccta
     1741 tttttgcttt caatatcaaa ggaatttctc cttttgatat cgcttacgaa cttagtaaaa
     1801 aataccacat agaaacacgc gctggatgtg cttgtgctgg gccttatggt catgatttgc
     1861 taggcttaaa agataatcaa aaacttaaaa caaaaccagg ttggttaaga ataagcttgc
     1921 attatacgca tgaaaaagag gatattgatt atttttttaa tgctttaaat aaa
//
LOCUS       DAPIWB010000112         1890 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.113, whole genome shotgun sequence.
ACCESSION   DAPIWB010000112 DAPIWB010000000
VERSION     DAPIWB010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1890)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1890)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.113"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            23..1882
                     /locus_tag="RJ266_001634"
     CDS             23..1882
                     /locus_tag="RJ266_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7355352.1"
                     /translation="MREELFLKNTQALFEVDEFLACTLRSLKYLTFALIQDENGINFK
                     KDDIFLYENPNKELLENLTLFKTEYNKYPVLFFYGFGNGMFYKTLCKNKQHKHIIIFE
                     DNLEILTLAFHLFDFSEELKKEQLILFYTPNINTAQLTTLFTYEIIQKSVKIFNLFIH
                     NDFYQQFYSTQIQNINTQLIEIIRFIVLNKGNDPHDSLVGIKHTLDNLPKMLNHGIFQ
                     EFLKERRAKVENAIIVSTGPSLIKQLPLLKKYANKATIFCADSAYVILGKYGIKPDYV
                     CMLERDDIVSKCFDNDFGDFNKGILFILASVVHKEVLDFLEKDQRTYMLVHRPLNFAA
                     SLKLDEYGYLGVGHSVSNMIYELAGALRFENIIFIGQDLAYGEDGSSHPKEHIHGSQG
                     EEIRGEKYTLAYGGKGKVRTQLTWNLFRQAFEKDIFWAKEKLNITTYNCTEGGARIEG
                     TIEKPFLWACENLLDKDLNKPFDFPKFLDKKLAKEKLEKIKKYLQKSILESKEFIKKT
                     QTQLQKLRYTLEKNDKNFQTLEKIKNDLLNLFKEFKKLKLFNELCQAIYFHNECEILK
                     FEVLNTNKQKENLIDFLKIQHNWFIQGLGYLDTQNKTIEKSLENWNFDDIIKK"
BASE COUNT          755 a          246 c          274 g          615 t
ORIGIN      
        1 aatggatgga aagggtgaga aggtgagaga agagcttttt ttaaaaaata ctcaagcttt
       61 gtttgaggtc gatgagtttt tagcttgtac actaagatca cttaaatact taacttttgc
      121 acttatccaa gatgaaaatg gaataaattt taaaaaagat gatatttttc tttatgaaaa
      181 tcccaataaa gagcttttag aaaaccttac tctgtttaaa accgaatata acaaatatcc
      241 tgttttgttt ttttatggct ttggaaatgg aatgttttat aaaactttat gtaaaaacaa
      301 acaacataaa cacattatca tttttgaaga caatcttgaa attttaactt tagcttttca
      361 tttatttgat tttagcgaag aattaaaaaa agaacaacta atactttttt atactccaaa
      421 tattaataca gcacaactca ccacactttt tacttatgaa atcattcaaa aaagtgtaaa
      481 aatttttaat ctttttattc ataatgattt ttatcaacaa ttttatagca ctcaaataca
      541 aaatataaat actcaactga tagaaataat acgatttatc gttttaaaca aaggtaatga
      601 tccacatgat tctttagttg gaatcaaaca taccctagat aatctcccta aaatgttaaa
      661 tcatggaatt tttcaagaat ttctcaaaga aagaagagct aaggttgaaa atgctatcat
      721 tgtttctaca ggaccaagtc ttataaaaca acttccttta ttaaaaaagt atgctaataa
      781 agctacgatt ttttgtgcag atagtgctta tgttatcctt ggaaaatacg gtataaagcc
      841 tgattatgtt tgcatgctag aacgtgatga tatagtttct aaatgttttg ataatgattt
      901 tggcgatttt aacaaaggca tacttttcat acttgcttct gtggttcaca aagaagtatt
      961 agatttttta gaaaaagatc aaagaactta tatgcttgta catcgccctt taaattttgc
     1021 ggctagttta aaacttgatg aatatggata tcttggagta ggacacagtg tttcaaatat
     1081 gatctatgaa ctagcaggag ctttaagatt tgaaaatatc atttttatag gacaggattt
     1141 agcttatggc gaggatggaa gttcacatcc taaagagcat atacatggaa gtcaaggtga
     1201 agaaatcaga ggagaaaaat atacactagc ttatggggga aaaggcaaag taagaacaca
     1261 acttacttgg aatttatttc gtcaagcttt tgaaaaagat atattttggg caaaagaaaa
     1321 actcaatatc accacctaca actgcaccga aggtggagca aggatagaag gaaccataga
     1381 aaaacctttt ctatgggctt gtgagaattt acttgataaa gatttaaata aaccttttga
     1441 ttttccaaaa tttctagata aaaaactagc caaagaaaaa ttagaaaaaa taaaaaaata
     1501 tctccaaaaa agcattttag aatctaaaga atttataaaa aaaactcaaa ctcagcttca
     1561 aaagcttaga tacactttag aaaaaaatga caagaatttt caaactcttg aaaaaatcaa
     1621 aaatgatctt ttaaatcttt ttaaagaatt taaaaaactc aagcttttta atgaactttg
     1681 tcaagctatt tattttcata acgaatgtga aattttaaaa tttgaagttt taaacacaaa
     1741 taagcaaaaa gaaaatttaa tagacttttt gaaaatacaa cacaattggt ttatccaagg
     1801 tttaggatat cttgatactc aaaacaaaac catagaaaaa agtttagaaa attggaattt
     1861 tgacgatata atcaaaaaat aattaggatt
//
LOCUS       DAPIWB010000113         1890 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.114, whole genome shotgun sequence.
ACCESSION   DAPIWB010000113 DAPIWB010000000
VERSION     DAPIWB010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1890)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1890)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.114"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            24..596
                     /locus_tag="RJ266_001635"
     CDS             24..596
                     /locus_tag="RJ266_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HDV7355353.1"
                     /translation="MKKVLLSSLVAVSLLSTGLFAKEYTLDKAHTDVGFKIKHLQISN
                     VKGNFKDYSAVIDFDPASAEFKKLDATVKIASVNTENQTRDNHLQQDDFFKAKKYPDM
                     TFTMKKYEKIDNEKGKMTGTLTIAGVSKDIVLDTEIGGVAKGKDGKEKIGFSLNGKIK
                     RSDFKFAASTSTITLSDDINLNIEVEANEK"
     gene            complement(601..1557)
                     /locus_tag="RJ266_001636"
     CDS             complement(601..1557)
                     /locus_tag="RJ266_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355354.1"
                     /translation="MFLLDFLISLSFIFEISALVLSFYFKNSRIFFLTLVLLGAKLPY
                     FYTSFFQANLFVALFLPMVFTLFCLGKHHTLILSKKNIASVTTLIFIGILSIILPRNT
                     TFNSAGLEFHFITLNFFKPVSELGFLFFLVGLMLVFIKTFKTKEYYLIIAFFAAYFQF
                     LFQEGAGIRYFEFASLVFCFYLLNHAYRLAFFDTLTKLPNEKSLTRFTKGKNNYIIAL
                     LHFNELKDTKESYAKLILKQIAKILKRFRAKIFIVDNDFILIFNDKNQALNHLAFLES
                     TLKNTEFNLENENFKPDFKLIWQESEENLDKNLQSLRARLLD"
     gene            complement(1618..1827)
                     /locus_tag="RJ266_001637"
     CDS             complement(1618..1827)
                     /locus_tag="RJ266_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDV7355355.1"
                     /translation="MTKKSKRDMAYELDIDVSTLYNWRKYKPNLYRIVMLGFKFDELL
                     ENSKKTHEELLYIEQTIQDEIAKFK"
BASE COUNT          761 a          230 c          255 g          644 t
ORIGIN      
        1 aattactata aaaaaggaaa aaaatgaaaa aagttttatt aagttcattg gttgcggtgt
       61 ctttgttaag cacaggtttg tttgctaaag aatatacttt agataaagca catacagatg
      121 taggttttaa aatcaaacat ttacaaatta gcaatgtaaa aggaaatttc aaagattatt
      181 ctgcggtgat tgattttgat cctgcgagtg ctgaatttaa aaagcttgat gcaactgtaa
      241 aaatcgcatc tgtaaataca gaaaatcaaa caagagataa tcacttacaa caagatgatt
      301 ttttcaaagc aaaaaaatat cctgatatga cttttacaat gaaaaaatat gaaaaaatcg
      361 ataatgaaaa aggcaaaatg acaggaactt taactatagc tggagtttct aaagatatcg
      421 ttttagatac tgaaatcggc ggtgtagcta aaggcaaaga tggaaaagaa aaaataggct
      481 tttctttaaa tggaaaaatc aaacgctctg attttaaatt tgcagcaagt acttcaacta
      541 ttactttaag tgatgatatt aatttaaata tcgaagttga agcaaacgaa aaataatttt
      601 ttagtctaag agtcttgctc ttagactttg taaattttta tccaaatttt cttcactttc
      661 ttgccaaatc aatttaaaat ctggtttaaa attttcattt tctaaattaa attctgtgtt
      721 tttcaaggtg gattctaaaa aagcaagatg atttaaagct tgatttttat cattaaaaat
      781 taaaataaaa tcattgtcta cgatgaaaat ttttgctcta aagcgtttta aaatttttgc
      841 aatttgtttt aagatgagtt tggcatagct ttctttagta tcttttagtt cattaaaatg
      901 aagcaaggca atgatatagt tgttttttcc ctttgtaaag cgtgtaaggc ttttttcatt
      961 aggtagtttt gttaaggtgt caaaaaaagc caatctataa gcgtgattta aaagataaaa
     1021 acaaaaaacc aaacttgcaa attcaaaata tcttattcct gctccttctt gaaataaaaa
     1081 ctgaaaatat gcagcaaaaa atgcgataat aagataatat tctttagttt taaaggtttt
     1141 gataaaaaca agcattaatc cgactaaaaa aaataaaaat cctaattcac tcacaggctt
     1201 aaaaaaattt aatgtaataa aatgaaattc taaaccagca ctattaaaag tagtatttct
     1261 aggtaaaatg atacttaaaa tgcctataaa aataagggtt gtaactgaag cgatattttt
     1321 tttacttaaa attaaagtat gatgttttcc aaggcaaaat agagtaaaaa ccataggtaa
     1381 aaacaaagct acaaataaat tagcttgaaa aaaacttgta taaaaataag gcaacttggc
     1441 tcctaacaat actaaagtca aaaagaaaat tcttgaattt ttaaagtaaa aggataatac
     1501 aagtgctgaa atttcaaaaa taaaactcaa tgatattaaa aaatctaata aaaacatttc
     1561 aaatccttga ttttaataaa agtgataatt gtatagaaaa aagcttaaaa gtggatttta
     1621 tttaaattta gcaatctcat cttgtatagt ttgttctata taaagcaatt cttcatgagt
     1681 ttttttgcta ttttctaaaa gttcatcaaa tttaaagcca agcataacaa tacgatataa
     1741 attgggttta tattttctcc aattatataa agtgctaaca tcaatgtcta gttcatatgc
     1801 catatcacgc ttgctctttt ttgtcatttt ttaccttaaa aatttagcct ttgaaaaatt
     1861 ttacattaaa atttctttat taaaaacact
//
LOCUS       DAPIWB010000114         1890 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.115, whole genome shotgun sequence.
ACCESSION   DAPIWB010000114 DAPIWB010000000
VERSION     DAPIWB010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1890)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1890)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.115"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..185
                     /locus_tag="RJ266_001638"
     CDS             <1..185
                     /locus_tag="RJ266_001638"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355356.1"
                     /translation="QQMEPKNKNFLTPKQLEDEFGISISKQNKMRMQKNQNSTNSLPF
                     IKIGKTILYKRSEIEI"
     gene            215..1195
                     /locus_tag="RJ266_001639"
     CDS             215..1195
                     /locus_tag="RJ266_001639"
                     /inference="COORDINATES: protein motif:HMM:NF024872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDV7355357.1"
                     /translation="MNNKNDELLLEIIQNKQFKQANIKELENLEFEWLIDDFLVKQTL
                     VMIYAGAGSGKSYFMLYLSKYLLDSNKINRIIYFDADNSIKTLKERKGNEFLKTPNFY
                     YYFSNNIQKFTLFKDMQKAKDLNNTLIVIDSIRNFIQDDFNKDFTMIKIFDELQRARD
                     NGATIIFLHHQPKQNQDENNKAYKGATTFLDSVDEGYFLHKKDTNKNEEFIILLEPQK
                     KRFATKSQAFKINTLNLEFDFANYLEYGENNKAQITLNLVKEILNEHINGICQQELAS
                     KIKKKIEQDYIEIVGRNALWKLLDKYENIYWNIFYETQEKGGKKKIFKII"
     gene            1206..1745
                     /locus_tag="RJ266_001640"
     CDS             1206..1745
                     /locus_tag="RJ266_001640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355358.1"
                     /translation="MTNKSFLIKINQEDKIMLERIKKATNIPFSKILRYLLNLHFEDE
                     NTNNSPIIQKYKFYSNNEKHTISIKLTQEEYESLKILCKENGFKSVTKQIKYLLLNSI
                     HKEKFFNNDAIEHFIKIRSEMAKDYSNLYQLLKALRGKNLVKINDGALNNMIKNINAN
                     TQIILESFGKIVEKNKERI"
     gene            1747..>1890
                     /locus_tag="RJ266_001641"
     CDS             1747..>1890
                     /locus_tag="RJ266_001641"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355359.1"
                     /translation="MISKFKKERKKVKDLNKKLENIIYKIQNDKNINEIDLNKQLENI
                     FKAL"
BASE COUNT          895 a          196 c          243 g          556 t
ORIGIN      
        1 tgcaacaaat ggaaccaaaa aataaaaatt ttttaacacc aaaacaatta gaggatgaat
       61 ttggtattag cattagcaaa caaaataaaa tgcgtatgca aaaaaatcaa aatagcacaa
      121 attctctacc tttcataaaa ataggaaaaa ctattttata taaaagaagc gagattgaaa
      181 tatgactaga taaaaatacg attaaaggtg tcttatgaac aataaaaacg atgaattatt
      241 gcttgaaatt atacaaaata agcaatttaa acaagcaaat attaaagaat tagaaaattt
      301 agaatttgaa tggctaattg atgatttcct tgttaaacaa actttagtaa tgatttatgc
      361 tggtgcagga agtggaaaaa gttattttat gctttaccta agcaaatact tactagattc
      421 caataagata aatcgtataa tatattttga tgctgataat agcataaaaa ccctaaaaga
      481 acgcaagggt aatgaatttt taaaaactcc aaatttttat tactatttct caaataatat
      541 tcaaaaattc acactcttta aagatatgca aaaagcaaaa gatctgaata atactttaat
      601 agtaattgat agtattagaa acttcattca agatgatttt aataaagatt ttacaatgat
      661 taaaattttt gatgaattgc aaagagccag agacaatggt gctacaatta tttttctaca
      721 ccatcaaccc aaacaaaatc aagatgaaaa caataaagcc tacaaaggag caacaacttt
      781 tttagatagt gtggatgaag gttattttct gcataaaaaa gatactaata aaaatgagga
      841 atttattatt ttactagaac cacaaaaaaa gagatttgct acaaaatcac aagcttttaa
      901 aatcaataca ttaaatttag aatttgattt tgctaattat ttggaatatg gagaaaataa
      961 taaagcacaa attacactaa atcttgttaa agaaatttta aacgagcata taaatgggat
     1021 ttgtcaacaa gaattggcaa gtaaaattaa aaagaaaata gaacaagact atattgaaat
     1081 tgtaggaaga aatgccttgt ggaaactact agataaatat gaaaatattt attggaatat
     1141 tttttatgaa acacaagaaa aaggcggaaa gaaaaaaatt ttcaaaatca tttaaggaaa
     1201 tctaaatgac aaataaaagt tttttgatta aaatcaatca agaggataaa ataatgcttg
     1261 agagaataaa aaaagcgact aacattccat ttagcaaaat cttaagatat ttgctaaatt
     1321 tacattttga agatgaaaat acaaacaatt ctccaataat acaaaaatat aaattttatt
     1381 caaacaatga aaaacatact ataagtatta aattaacgca agaagaatat gagagcttaa
     1441 aaattctttg taaagaaaat ggctttaaga gtgttacaaa acaaataaaa tacttacttt
     1501 taaactctat acacaaagaa aaatttttta ataatgatgc aatagagcat tttataaaaa
     1561 taaggtcaga aatggcaaag gattattcaa atctatatca acttttaaaa gctcttagag
     1621 gtaaaaattt agtaaaaata aatgatggag ctttaaacaa tatgattaaa aatataaatg
     1681 caaatactca aattatttta gaaagctttg gaaaaatagt agaaaaaaac aaagaaagga
     1741 tttaagatga taagtaaatt taaaaaagaa agaaaaaaag taaaagattt aaataaaaag
     1801 ttagaaaaca tcatttataa aatccaaaat gataaaaata ttaatgaaat agatttaaac
     1861 aaacaattag aaaatatttt taaagctctt
//
LOCUS       DAPIWB010000115         1859 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.116, whole genome shotgun sequence.
ACCESSION   DAPIWB010000115 DAPIWB010000000
VERSION     DAPIWB010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1859)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1859)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.116"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            2..1087
                     /locus_tag="RJ266_001642"
     CDS             2..1087
                     /locus_tag="RJ266_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002876187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HDV7355360.1"
                     /translation="MIKFLDLKQINDRFNTEFITKFKEILESGWYILGKQCEKFENNF
                     AKYCGVKHCIGVANGLDALRLIIKAYNFKENDEIIVPANTYIASILAITDNKCKPILI
                     EPDINTYNINPDLIEEKITKKTKAIMVVHLYGQVCDMEKIQLLANKYNLKIIEDCAQA
                     HGAIYKDKRVGNLGDAAGFSFYPGKNLGALGDAGCICTNDDNFASKIRALANYGSHKK
                     YENLYIGLNSRLDEIQAAFLDIKLKYLDEDNNKRKNIANFYLQNIKNENIILPSNKFD
                     HVWHLFIVKTKLRDELQHYLNNHDIQTIIHYPIPPHKQKCYKDLNHLQLPVTENIHQE
                     VLSLPISPTMKENDFKKVADILNKWKV"
     gene            complement(1119..1859)
                     /locus_tag="RJ266_001643"
                     /pseudo
     CDS             complement(1119..1859)
                     /locus_tag="RJ266_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866158.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2972 domain-containing protein"
BASE COUNT          700 a          241 c          222 g          696 t
ORIGIN      
        1 aatgataaaa tttttagact taaaacaaat aaatgataga tttaatactg aatttataac
       61 aaaatttaaa gaaattctag aaagtggttg gtatatactt ggaaagcaat gtgaaaaatt
      121 tgaaaataat tttgcaaaat attgtggggt taaacattgc ataggcgttg caaatgggct
      181 tgatgcttta agattgatca taaaagctta taattttaaa gaaaatgacg aaatcatagt
      241 tcccgcaaat acatacatag catcaatttt agctataact gataataaat gcaaacctat
      301 actgatagag cctgatatca atacttacaa cataaatcct gatttaatag aagaaaagat
      361 cacaaaaaaa actaaagcta tcatggttgt tcatctttat ggtcaagttt gtgatatgga
      421 aaaaattcag ttgttagcta ataaatacaa tttaaaaatt atagaagatt gtgctcaagc
      481 acatggcgct atttataaag ataaacgagt tggaaatttg ggagatgccg ccggtttttc
      541 tttttaccct ggtaaaaatt taggtgcttt aggggatgct gggtgtattt gcaccaatga
      601 tgataatttt gcatctaaaa ttagagcttt agcaaactat ggctctcata aaaaatatga
      661 aaatttatat ataggattaa attctagatt agatgagata caagctgctt ttttggatat
      721 aaaattaaaa tatttagatg aagacaataa taaaagaaaa aatatagcaa atttttatct
      781 acaaaatata aaaaatgaaa atattatatt acctagtaat aaatttgatc atgtttggca
      841 tctatttata gtcaaaacaa agcttagaga tgaattacaa cactatctaa ataatcatga
      901 tattcaaact attatacact atcctatccc tcctcataag caaaaatgct ataaagattt
      961 aaatcattta caactacccg taacagaaaa catccatcaa gaagttttgt cattacctat
     1021 atcgccaaca atgaaagaaa atgattttaa aaaagtggct gatatattaa acaaatggaa
     1081 agtctgatag atcgctctcc attttattcg cttattcttt aaaaaatttc aagaaatttt
     1141 ttatagtatt cccaactatt aataatatct ggtctatgct cttttatatg ttgtaattca
     1201 taatccaaaa tatttttaat tttttttcct aaatcttgat gctcccttaa ataatttaaa
     1261 acatcttctt cttttaccat attttcaagt ctttcattcg cttttttctc taaaataatc
     1321 ataaattttt caaaatattc tctaagatca ttgattaaag ctttatcatc tttaataatg
     1381 atccaatttt tattttctat attaattgaa attttatcaa ataacttgct ttttgtattt
     1441 acaagttctt ttttttatat caattaaatc atcttttatc tcattataat gcttatcatt
     1501 gtctaaaaat actttatttt catcagatac tattatcaaa atatcattat tgacaataag
     1561 tctataaggt agtaaataat acaattcgtt ccaaaatttc tgcgtaaatt tatattcatc
     1621 attatcattt ggttctttaa aattaagctc tttagcaaga gtttttatag tggcaaatgc
     1681 attatctttt gaaattgatt tcgtgtctac atataatata tttttgtttt taatcaaatt
     1741 tatatttgaa aaatagctaa aacttagctc ttcgtttacg ataaaataga tagatgataa
     1801 atcaggtttt ttaagattag cattatgtcc atttttatct gtatatctta ttctatcta
//
LOCUS       DAPIWB010000116         1539 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.117, whole genome shotgun sequence.
ACCESSION   DAPIWB010000116 DAPIWB010000000
VERSION     DAPIWB010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1539)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1539)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1539
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.117"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            30..1061
                     /gene="pseI"
                     /locus_tag="RJ266_001644"
     CDS             30..1061
                     /gene="pseI"
                     /locus_tag="RJ266_001644"
                     /EC_number="2.5.1.97"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid synthase"
                     /protein_id="HDV7355361.1"
                     /translation="MQIGNFNTDKKVFIIAELSANHAGSLEMALQSIKAAKEAGADAI
                     KIQTYTPDSMTLNSNKEDFIIKGGLWDKRKLYELYQSAKTPYEWHSQIFETAQNEGIL
                     CFSSPFAKEDLEFLKRFDPIAYKIASFEANDENFVRLIAKEKKPTIVSTGIATEEELF
                     KICEIFKEEKNPDLIFLKCTSAYPTAIEDMNLKGIASLKEKFNVEVGLSDHSFGFLAP
                     VMAVALGARVIEKHFMLDKSIESEDSKFSLDFDEFKAMVDAVRQAESALGDGKLDLDE
                     KALKNRVFARSLYASKDIKKGEMFSEENVKSVRPSFGLHPKFYQELLGKKATKDIEFG
                     DALKQGDFQ"
     gene            1058..>1539
                     /locus_tag="RJ266_001645"
     CDS             1058..>1539
                     /locus_tag="RJ266_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7355362.1"
                     /translation="MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNL
                     DINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFK
                     ALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMILENDKLQAQDYTELCSS
                     "
BASE COUNT          592 a          204 c          266 g          477 t
ORIGIN      
        1 gtcaggaaat ttaccaaaga aagaaaagta tgcaaatagg aaattttaac accgataaaa
       61 aggtttttat catagcagaa cttagtgcaa atcacgcagg aagtcttgag atggcacttc
      121 aaagtataaa agctgccaaa gaagcaggtg ctgatgcgat aaaaattcaa acttacactc
      181 cagatagcat gactctaaat agcaacaaag aagattttat tattaagggt gggctttggg
      241 ataaaagaaa actttatgag ctttatcaaa gtgcaaaaac cccttatgaa tggcattctc
      301 aaatctttga aaccgcacaa aatgaaggca tactttgttt ttcaagtcct tttgccaaag
      361 aagatttaga atttctaaaa cgctttgatc ctatagccta taaaatcgct tcttttgaag
      421 ctaatgatga aaatttcgtg cgtttaatcg ccaaagaaaa aaaacctact atcgtttcaa
      481 cgggcattgc tacagaagaa gaacttttta aaatctgtga aatttttaaa gaagaaaaaa
      541 atcctgattt aatcttttta aaatgcactt cggcttatcc tactgccata gaagatatga
      601 atttaaaagg catagcaagt ttaaaagaaa aatttaatgt tgaagtgggg ctaagtgatc
      661 atagctttgg ttttttagcc cctgttatgg cagtagcact tggagctaga gtgatagaaa
      721 agcattttat gttagataaa agcatagaaa gtgaagacag taaatttagt cttgattttg
      781 atgaatttaa agctatggta gatgcagtaa gacaagctga aagtgcttta ggcgatggta
      841 agttagatct agatgaaaag gcgcttaaaa accgtgtttt tgcaagaagc ttatatgcaa
      901 gtaaggatat caaaaaaggt gaaatgttca gcgaagaaaa tgtaaaatcc gtgcgtcctt
      961 cttttggact acatcctaaa ttttatcaag aacttttagg aaaaaaagct actaaagata
     1021 tagaatttgg tgatgcttta aaacaaggag atttccaatg accttcaccc ctactcaaaa
     1081 agagctcttt aacaaaaaca ttgaggcttt aagtaatatt cttttaaaag aaagtttaaa
     1141 agaaattaaa tcaagtaaat ttgaacttat cttaggtaaa gataatctag atatcaatct
     1201 aaaagataca agtataaaaa ataatggggg ggggtataat gaaaatttac tttatcaaga
     1261 tcccattaaa gaattgcaaa ctatgctaaa tacttataat gataaatatc tactttatcc
     1321 tgtattatat ttttatggtt ttggaaatgg aattttattt aaagctttat tgcaaaataa
     1381 aaatcatcaa catattgttg tttttgaaaa agatatagaa atcatttgga taatgtttca
     1441 tatcttagat ttttcacatg aattacaaag tgcaagattg atgattttag aaaatgataa
     1501 attacaagct caagattata ctgaactttg ttcttctaa
//
LOCUS       DAPIWB010000117         1473 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.118, whole genome shotgun sequence.
ACCESSION   DAPIWB010000117 DAPIWB010000000
VERSION     DAPIWB010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1473
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.118"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..1383)
                     /locus_tag="RJ266_001646"
     CDS             complement(<1..1383)
                     /locus_tag="RJ266_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HDV7355363.1"
                     /translation="MKSVKLKVSLIANLIAVVCLIILGVVTFIFVKQAIFHEVVNAEI
                     NYVKTAKNSIESFKARNSLALESLAKSILKHPIEQLDSQDALMHYVGKDLKNFRDAGR
                     FLAVYIAQPNGELVVSDPDSDAKNLDFGTYGKADNYDARTREYYIEAVKTNKLYITPS
                     YIDVTTNLPCFTYSIPLYKDGKFIGVLAVDILAADLQAEFENLPGRTFVFDEENKVFV
                     STDKTLLQQGYDISTIANLAKTKEDLEPFEYTRPKDGNERFAVCTKVSGIYTACVGEP
                     IEQIEAPVYKIAFIQTVIVVFASILSVILLYFIVSKYLSPLAAIQTGLTSFFDFINYK
                     TKNVSTIEVKSNDEFGQISNAINENILATKRGLEQDNQAVKESVETVHVVESGNLTAR
                     ITANPRNPQLIELKNVLNRLLDALQARVGSDMNEIQRVFNSYKSLDFTTEVKDANGAV
                     EVTTNALGQEI"
BASE COUNT          490 a          247 c          199 g          537 t
ORIGIN      
        1 gatttcttgt cctagtgcat tagtagttac ctctacagct ccattggcat cttttacttc
       61 agtagtaaag tcaagagatt tataactatt aaatactctt tgaatttcat tcatatcaga
      121 acctactcta gcttgtaaag catcaagaag tctatttaga acatttttta attctattaa
      181 ttgtgggttt cttggattag cagtaattct tgctgttaaa ttaccacttt ctactacatg
      241 aacagtttca actgattctt taacggcttg attgtcttgt tctaagcctc ttttagtagc
      301 aaggatgttt tcattgatag catttgagat ttgtccaaat tcatcattgc tttttacttc
      361 tatagtagaa acattttttg ttttatagtt gataaaatca aagaatgaag ttaaacctgt
      421 ttggatagct gcaagtgggg agaggtattt tgatacgatg aaataaagga ggatgacgct
      481 aagaatgctt gcaaaaacaa caatcacagt ttgtataaat gcaattttat aaactggagc
      541 ttctatttgt tctattggct ctccaacgca agcagtataa attccagaaa cctttgtgca
      601 tacagcaaat ctttcattac catcttttgg tctagtatac tcaaaaggtt caagatcctc
      661 tttagtttta gcaagatttg caatagtact aatatcataa ccttgttgca aaagagtttt
      721 gtctgtagaa acaaatactt tattttcttc atcaaataca aaagttctac ctggtaaatt
      781 ttcaaattca gcttgcaaat ctgccgcaag aatatctaca gccaaaaccc ctataaattt
      841 accatcttta taaagcggaa tagaatatgt aaagcaaggt aaatttgtag ttacatcaat
      901 ataagatggg gtaatataaa gtttatttgt tttaactgct tctatataat actctcttgt
      961 tctagcatca taattatcag cttttccata agttccaaaa tctaaatttt tagcatcaga
     1021 gtctggatcg cttacaacaa gttcgccatt tggttgagca atataaactg ctaagaatct
     1081 tccagcatct ctaaaattct ttaaatcttt tccaacataa tgcattaaag catcttgact
     1141 atctaactgt tctataggat gctttaaaat actcttagct aaactttcaa gagctaaaga
     1201 atttcttgcc ttaaaagact ctatagaatt tttagccgtt ttaacataat ttatttcagc
     1261 attcacaact tcatgaaaaa ttgcttgctt tacaaatata aatgttacaa cacctaaaat
     1321 tatcaaacac actactgcga ttaaatttgc aatcagtgaa accttcaatt ttacgctttt
     1381 cataatttaa gcgctccttt ctaatattat tttatagaga tatctacata aagttttaga
     1441 attaaaaatt aaaaaatcta gatttttact taa
//
LOCUS       DAPIWB010000118         1417 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.120, whole genome shotgun sequence.
ACCESSION   DAPIWB010000118 DAPIWB010000000
VERSION     DAPIWB010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1417)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1417)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1417
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.120"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..>1417
                     /locus_tag="RJ266_001647"
     CDS             <1..>1417
                     /locus_tag="RJ266_001647"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355364.1"
                     /translation="NLSLGGASIIFSLYCTLREKNKDIVNKADLVILESNIIDMIHGI
                     DLYGKIHLILRNIFLTYNELSKLNKKFLVLLLPYIKNDFKKNETINNAHRMCCNQYGF
                     NCVDVQSVYLKNNVMDFYMTMMPDVRHQLQRIMYEFGKNIANENFSLFKFSLPSSIDL
                     DFKICSPKNDFKIENKMKEFIVSDLFHNEYCYRITEIDKYLFPTFLIGYKILATHSWT
                     HGKKGLKTWKQYENTLSSIMIQNNQGKFICGTSSHYNSFTCIYDNILIDNHTIISLSD
                     VNNHVDYYDLVNLMLYKDEGKIQVAVDDIKETVIKQEYNFSHLFPDVVFIKEILEEYL
                     NSTSNISIQISSLTQQLNHFKTFSTAKQRIQNQLPYRLGQAMIINSKNFLGYIFLPYI
                     LLSIVILYKQEQKNYKHKIKLNPESTLPPLETYPDYNEALKEKRCFTYKLGLALIEAN
                     KKWYGGGYIKLWFKIKKLKYEF"
BASE COUNT          556 a          154 c          188 g          519 t
ORIGIN      
        1 gaatttatct ttgggtggag catctataat attttcttta tattgcacct taagagaaaa
       61 aaacaaagat atagtaaata aggcagattt agttattttg gaatcaaata ttatagatat
      121 gatacatggt atagatctct atggaaaaat tcacttaata ctcagaaata tttttttaac
      181 atataatgaa ttatctaaat taaataaaaa atttttagtt ttactgttgc cttacatcaa
      241 aaatgatttt aaaaaaaatg aaactattaa caatgcccat agaatgtgtt gcaaccaata
      301 tggatttaat tgtgttgatg ttcaatcggt ttatttgaag aataatgtta tggattttta
      361 tatgaccatg atgcctgatg ttagacatca attacaaaga attatgtatg aatttggtaa
      421 aaatatagca aatgaaaatt tttctttatt taaattttct cttccttcat ccatagattt
      481 ggattttaaa atttgttctc ctaaaaatga ttttaaaata gaaaataaga tgaaagaatt
      541 tattgtatct gatttatttc ataatgagta ttgttataga attacagaaa tagataaata
      601 tctttttcct acttttttaa taggttataa gatattggct actcattctt ggactcatgg
      661 aaaaaaaggt ttaaaaacat ggaaacaata tgaaaatacc ttatctagta taatgataca
      721 gaataatcaa gggaaattta tttgtggcac atcttcacat tataatagtt ttacttgtat
      781 ttatgataat atattaattg ataaccatac aataatttct ttgagtgatg taaataacca
      841 tgttgattat tacgacttgg ttaacttaat gctttataaa gatgagggaa aaatacaagt
      901 agctgtagat gatattaagg aaacagtaat taagcaagaa tataattttt ctcatttatt
      961 tccagatgtg gtttttatta aggaaatttt ggaggaatat ttaaattcta catctaatat
     1021 ttcgattcag atttcctcac taactcaaca actcaatcat tttaaaactt tttcaacagc
     1081 taaacaaagg attcaaaacc aacttccata tagattaggc caagcaatga taataaattc
     1141 taaaaatttt ttaggttata tatttttacc gtatatttta ttaagtattg ttatactata
     1201 taaacaagag caaaaaaatt ataaacataa aattaaatta aacccagaat caaccttacc
     1261 tccattagaa acttatcctg attataatga agctttaaaa gaaaaaagat gcttcactta
     1321 taaattagga cttgctttaa ttgaagctaa taaaaaatgg tatggggggg ggtatatcaa
     1381 attgtggttt aagattaaaa aattaaaata tgaattt
//
LOCUS       DAPIWB010000119         1400 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.121, whole genome shotgun sequence.
ACCESSION   DAPIWB010000119 DAPIWB010000000
VERSION     DAPIWB010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1400)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1400)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1400
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.121"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..1298)
                     /locus_tag="RJ266_001648"
     CDS             complement(<1..1298)
                     /locus_tag="RJ266_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDC sensor domain-containing protein"
                     /protein_id="HDV7355365.1"
                     /translation="MQSINSGKSVGISAKLTLWAGISVVLILAITSAVSYFDSRNNTH
                     KLLKDNQLKTMQDVGAFFESYSMSKRNGIQILANELNKHPDVSDEELINLAKIFKEIN
                     GYDLVYVGFDNTGKNYQSDGQILDLSKGYDTKNRPWYKAAKEAKKLIVTEPYKSVNRG
                     KVGLTYAAPFYDRNGNFRGVVGGNYDLAKFSSDVLTVGKSYNTFTEVLDPEGTILFNN
                     EVAKILTKTELSINIANAIKADPALIDPKTDTLFTAKDHQGVDYAIMCNSAFNPLFRI
                     CTITENKVYTEAVNSILMKQVIVSIIAIIIALILIRFLISRSLSPLAAIQTGLTSFFD
                     FINHKTKNVSTIEVKSNDEFGQISNAINENILATKRGLEQDNQAVKESVQTVSVVEGG
                     NLTARITANPRNPQLIELKNVLNKLLDVLQARVGSDMNAI"
BASE COUNT          451 a          221 c          210 g          518 t
ORIGIN      
        1 tgaatagcat tcatatcaga acctactcta gcttgtaaaa catcaagaag tttatttaga
       61 acatttttaa gttcaataag ctgtgggttt cttggattag cagtaattct tgctgttaaa
      121 ttaccacctt ctacaactga tacggtttga actgattctt taacggcttg attgtcttgt
      181 tctaagcctc ttttagtagc aagaatgttt tcgttgatag catttgagat ttgtccaaat
      241 tcatcattgc tttttacttc tatagtagaa acattttttg ttttatggtt gataaagtca
      301 aagaatgaag ttaaacctgt ttggatagct gcaagtgggg agaggcttct gctgattaaa
      361 aatctaatca agattaaagc tatgattata gctataatac taactataac ttgtttcatt
      421 aaaatagaat taacagcttc ggtataaact ttgttttctg ttattgtaca aatcctaaat
      481 aaaggattaa aagcagaatt acacataatc gcataatcta cgccttggtg atctttagcg
      541 gtaaataaag tatctgtttt tggatcaata agagcaggat ctgctttgat tgcattggcg
      601 atattgatac ttaattctgt ttttgttagt attttagcaa cttcattatt aaaaagtatt
      661 gttccttctg gatcaagtac ttcagtaaag gtattgtatg attttcctac agttaaaaca
      721 tcgcttgaaa attttgctag atcataattt ccacctacaa cacctctaaa atttccattt
      781 ctatcataaa atggagcagc gtaagttaaa ccaacctttc ctctattgac ggatttataa
      841 ggttctgtta ctataagctt ttttgcttct ttggcagctt tataccaagg acgattttta
      901 gtatcataac cttttgatag atctaaaatt tgaccatcag attgataatt ttttcctgta
      961 ttatcaaatc ctacataaac tagatcatag ccattaattt ctttgaatat tttggcaaga
     1021 ttgatcagct cttcatcgct cacatcagga tgtttgttaa gctcattggc tagtatttga
     1081 ataccatttc tttttgacat actatagctt tcaaagaaag cacccacatc ttgcatagtt
     1141 tttaactgat tgtcttttag caatttatgt gtgttgtttc tcgaatcaaa gtaactaaca
     1201 gcacttgtga ttgctaaaat taatacaact gaaattccag cccatagcgt aagcttggct
     1261 gaaattccaa cggatttgcc tgaatttatt gattgcatta taactcctat atttatattg
     1321 acaatgaaat aaaaatatta ttctagcaaa aaacaagaga ataaagtata aaaaatgaac
     1381 ttttttacat aaaaaatcaa
//
LOCUS       DAPIWB010000120         1364 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.122, whole genome shotgun sequence.
ACCESSION   DAPIWB010000120 DAPIWB010000000
VERSION     DAPIWB010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1364
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.122"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            89..493
                     /locus_tag="RJ266_001649"
     CDS             89..493
                     /locus_tag="RJ266_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002860228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WxcM-like domain-containing protein"
                     /protein_id="HDV7355366.1"
                     /translation="MKNYKILKLDAIKDDRGKLVALESNKEIPFEIKRVYYIFDTDPN
                     FPRGAHAHKNLEQVLIMMSGSCDIILNDGKNCEKICLNRPDMGLYIGKNMWREMKNFS
                     YGAKLLVLASDFYDEKEYIRNYNEFLRNINDT"
     gene            483..926
                     /locus_tag="RJ266_001650"
     CDS             483..926
                     /locus_tag="RJ266_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDV7355367.1"
                     /translation="MIHKMSDVQSSNIGKNTNIWQFCVVLPNAKIGDNCNICSHCFIE
                     NDVVIGDNVTIKCGVQIWDGITIEDNVFIGPNVTFCNDKYPKSKQYPKEFLKTVIKKG
                     ASIGANATILPGVIIGENAVIGGGAIVTKDIAANTTYYCKIISKQ"
     gene            948..>1364
                     /locus_tag="RJ266_001651"
     CDS             948..>1364
                     /locus_tag="RJ266_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002876185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV7355368.1"
                     /translation="MSDFCIIGKNINMYLVDDEDAGFIFELRSDVVKNKFLNKIDNDI
                     KKQREWIRLYKKREKNKKEFYFTIRNKNNEKLGLVRLYDFIDDSFCWGSFIIKHGVAF
                     YISIEVVMNVYEFAFYNLGFNASHFDVRKDNDRVVAF"
BASE COUNT          547 a          109 c          258 g          450 t
ORIGIN      
        1 agaatatatt tatgattata agtatttttg tgaattaaaa aataatatgg gggggggtat
       61 gctataaaaa tcatgcctta aaagtggcat gaaaaattat aaaattttaa agttagatgc
      121 cataaaagat gatagaggta aattagtagc tttagaaagc aataaagaaa ttccatttga
      181 gataaaaagg gtgtattata tatttgatac agatccaaat tttccaagag gagcacatgc
      241 acataaaaat ttagagcaag tgcttataat gatgagtggt tcttgtgata taatactaaa
      301 tgatggaaaa aattgtgaaa aaatttgttt aaatcgtcct gatatgggtc tttatatagg
      361 taaaaatatg tggagagaaa tgaaaaattt ttcttatgga gcaaaattgc tagttttggc
      421 aagtgatttt tatgatgaaa aagagtatat aagaaattat aatgaatttt taaggaatat
      481 taatgataca taaaatgtca gatgtacaaa gtagtaatat aggtaaaaat acaaatatat
      541 ggcaattttg cgtagtttta cctaatgcta aaataggaga taattgcaat atatgttctc
      601 attgctttat agaaaatgat gttgtgattg gagataatgt tacgattaag tgcggggttc
      661 aaatatggga tggtataaca atagaagata atgtttttat agggccaaat gtaacatttt
      721 gcaacgataa atatccaaaa tcaaaacaat atccaaaaga atttttaaaa actgtaatta
      781 aaaaaggcgc tagtattggt gctaatgcga caattttacc aggtgtaatt ataggagaaa
      841 atgcagtgat aggggggggg gctatcgtta caaaagatat tgcagccaat acaacttatt
      901 attgcaaaat tatttcaaaa caataatttt ttacaaggat tatacaaatg agtgattttt
      961 gcataattgg aaaaaatatt aatatgtatt tagttgatga cgaagatgct ggatttattt
     1021 ttgaactcag aagtgatgtt gtaaaaaata aatttttaaa caaaatagat aatgatataa
     1081 aaaagcaaag agaatggatt agattatata agaagagaga aaaaaataaa aaagaatttt
     1141 attttacaat cagaaataaa aataatgaaa agttaggcct agttagattg tatgacttta
     1201 ttgacgattc tttttgctgg ggaagtttta taataaaaca tggggttgcc ttttatatat
     1261 ccatagaggt tgttatgaat gtgtatgaat tcgcatttta taatttaggt tttaatgcta
     1321 gtcattttga tgtaagaaaa gataacgata gagttgtagc cttt
//
LOCUS       DAPIWB010000121         1356 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.123, whole genome shotgun sequence.
ACCESSION   DAPIWB010000121 DAPIWB010000000
VERSION     DAPIWB010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1356)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1356)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.123"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            13..756
                     /locus_tag="RJ266_001652"
     CDS             13..756
                     /locus_tag="RJ266_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4261 domain-containing protein"
                     /protein_id="HDV7355369.1"
                     /translation="MTIELNHNFTSFVLLDEVDFNFSELKSILEDKFNIKIADENFTK
                     EGVIFSYENMLVTLNLIKNPIPNHEAEYYANFNFMWKDALEQTKKHKAHLLIAVLSQD
                     QSKLEQAKMFTKIAALCLENKHALGFYTGAVVLEPSFYIENAKMLDDNRLPVYNWIYV
                     SVYPSENGVNAYTYGLRNFDKLELEVCDLNIEEKELFFCIYDIVLHILTYDINLKDKD
                     ILKFEDGKEIKFIKSQGISVENESLKIIF"
     gene            820..1236
                     /locus_tag="RJ266_001653"
     CDS             820..1236
                     /locus_tag="RJ266_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HDV7355370.1"
                     /translation="MKAKLTLLALLGTTVLLAKDMVVPASELPNNAKEFISKNFKTAQ
                     IGLVKKDIDSYDVILNDGTEIDFMINGEWKEVDGKYKALPHTILPNVMKKVSATQSNA
                     QILEVDKEINGYKFKFNNNMEVYTDMQGNILGQKLD"
BASE COUNT          517 a          146 c          218 g          475 t
ORIGIN      
        1 atagggttta acatgactat agaattaaat cacaatttta cctcttttgt tcttcttgat
       61 gaagttgatt ttaatttttc ggagttaaaa agcattttag aagataaatt taatataaaa
      121 atagctgatg aaaattttac caaagagggc gtgatttttt catatgaaaa tatgttagtt
      181 actctaaatt tgattaaaaa tcctatacct aatcacgaag cagaatacta tgcaaatttt
      241 aattttatgt ggaaagatgc cttagagcaa actaaaaaac ataaagctca tcttcttata
      301 gcggtgctaa gtcaagatca aagcaaatta gaacaagcta aaatgtttac gaaaattgca
      361 gctttatgtt tggaaaataa acatgcttta ggtttttata caggtgcagt tgttttagag
      421 cccagttttt atatagaaaa tgcaaaaatg ttagatgata atcgcttgcc ggtatataat
      481 tggatatatg ttagtgttta tcctagtgaa aatggagtta atgcttatac ttatgggctt
      541 agaaattttg ataaattaga acttgaagtt tgtgatttaa acatagaaga aaaagaactt
      601 ttcttttgta tttatgatat tgttttgcat attttaactt atgatattaa tctaaaagat
      661 aaagatattt taaaatttga agatggaaaa gaaataaaat ttataaaaag tcaaggtata
      721 agtgttgaga atgaaagctt gaaaattatt ttttaagttt cacattcact tcacagtttt
      781 gagttaaact ttcgccaacc aagaaaaaaa ggagaaatta tgaaagcaaa actaacttta
      841 cttgctttgt tgggtactac ggtgctttta gctaaagata tggttgttcc tgctagcgaa
      901 cttccaaata atgccaaaga atttatttct aaaaatttta aaaccgctca aattggtttg
      961 gtgaaaaaag atatagattc ttatgatgtg attttaaatg atggaactga aattgatttt
     1021 atgatcaatg gagagtggaa agaagttgat ggaaaatata aggctttgcc acatactatc
     1081 ttacctaatg ttatgaaaaa agtgagtgca actcaatcaa atgctcaaat tcttgaagta
     1141 gacaaagaaa ttaatggtta taaatttaag tttaataaca atatggaagt ttatacagat
     1201 atgcaaggaa atatcctagg tcaaaaatta gattaatttt tgaaaattta actcccttag
     1261 aaaatttgat gcaaaaattt ggaagcatag tcttccaaat ttttattttt tgattgcaaa
     1321 acccaaaata tatttagttt taaaataata ctttat
//
LOCUS       DAPIWB010000122         1302 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.124, whole genome shotgun sequence.
ACCESSION   DAPIWB010000122 DAPIWB010000000
VERSION     DAPIWB010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1302)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1302)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1302
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.124"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..>1302
                     /locus_tag="RJ266_001654"
     CDS             <1..>1302
                     /locus_tag="RJ266_001654"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355371.1"
                     /translation="NMKILVTKFLGLIVSNRPDGFASRIWAFLNAMYIAKKTGFKFGF
                     VWPRFDDVGGMISKKYITIDFEENIFDKNFIQNHSYTCSRLPQTHSYDNCLGPLSLKN
                     IQKLPFYEDYGHLVTCCIPLYELIFDIDIQEYQYKLRQIWNKLQFSYKYLNIKNIVEN
                     IYHKLNNHFVAIHIRGGDIVNGEHRLFIMSSLWTYLYPLELVTQLIKMLLGQKIKIIV
                     FSDDDEAVEMIKKNLIYNQYNLENLYFSKDLTPKYLSIEENIFFNFQLLSKSRYIYGS
                     QWSTFRILAGFLGECKKQEAILDTFTYDEQYQILSDNLRSVKTNRSYKAASCMYLYVI
                     GRNIDKDKECLIKILRKGFRYDPKNLSFKIKIIDLLFELDVVKAECEIKNIFFEKKYG
                     FIELLFSKFYKMEFEMEWRNYLKFANKNYPYISLIASYIAFY"
BASE COUNT          492 a          122 c          194 g          494 t
ORIGIN      
        1 aatatgaaaa ttctagtaac aaaattttta ggcttgattg tatccaacag accagatgga
       61 tttgcttcaa gaatatgggc ttttttaaat gctatgtata ttgcaaaaaa aactggattt
      121 aaattcggtt ttgtatggcc aagatttgat gatgttggtg gcatgatttc taaaaaatat
      181 ataactattg attttgagga aaatatattt gataaaaatt ttattcaaaa tcactcttat
      241 acttgtagtc gtttgccaca aactcatagt tatgataact gtttaggccc cttgtcttta
      301 aaaaatattc aaaaattacc tttttatgaa gattatggtc atttggttac atgttgtatt
      361 ccgctttatg aattaatttt tgatattgat atacaagaat atcaatataa actacgacaa
      421 atttggaata aattacaatt ttcctacaag tatttaaata taaaaaatat tgttgagaat
      481 atttatcata aattgaataa tcattttgtg gctatacata taagaggtgg agatattgtt
      541 aatggagaac atagattgtt cataatgagt agcttatgga cttatttata tcctttggag
      601 ttggtaacac aattgattaa aatgctttta ggtcaaaaaa ttaaaattat cgtattttca
      661 gatgatgatg aagctgttga aatgattaaa aaaaatctta tctataatca gtataattta
      721 gaaaatcttt atttttctaa agatttgacc ccgaaatatt tatctataga agaaaatatt
      781 ttttttaatt ttcaactatt atctaaatca agatatatct atggttctca atggtctact
      841 tttaggatat tagctggatt tttaggagaa tgtaagaagc aagaggcaat tttagatacc
      901 tttacatatg atgaacaata tcagatttta agcgataatt taagaagcgt aaaaactaat
      961 agaagttata aagcagcaag ttgtatgtat ttatatgtta ttggacgaaa tatagataaa
     1021 gataaggaat gtttaataaa aattttaaga aagggtttta gatatgatcc aaaaaatctc
     1081 tcgtttaaga ttaaaataat tgatttacta tttgaacttg atgttgttaa agccgaatgt
     1141 gaaattaaaa atattttttt tgaaaaaaaa tatggattta tagaattgtt attttctaaa
     1201 ttttataaaa tggaatttga gatggaatgg agaaattatc ttaaatttgc aaataaaaat
     1261 tatccttaca tttctttaat tgcaagttat atagcatttt at
//
LOCUS       DAPIWB010000123         1238 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.125, whole genome shotgun sequence.
ACCESSION   DAPIWB010000123 DAPIWB010000000
VERSION     DAPIWB010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1238)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1238)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.125"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..>1238)
                     /locus_tag="RJ266_001655"
     CDS             complement(<1..>1238)
                     /locus_tag="RJ266_001655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HDV7355372.1"
                     /translation="TLQLGEKPYIISAKPDGFGMRLSSMLIGMYLAEKLGFNFGFVWD
                     NSIDLDRFDIRTKISEDIYYFANDMENVSSIFSYFFLKKYYITDYKIQKNHGFKLHSK
                     IRTFDEIKSPPFENEWGWYSTDIPPYYWLKDCKKEEFLCIVRDIYNNKFIFSSDYQQI
                     FDNVNVINEKINNFIALHIRGGDIVYSSLRKHAGRKVLEERFFPYEIALEIIKRHTNA
                     NVKIIIFGQDVKSNMKLLNYIVENKILPKNKIFTVDEFINQTFSSLQRVFFEINLMSK
                     AYAIYSPKVSAFSRAAMMISGKDILIAYEDIFNVQERFDIIQRNLFSLGLNDLQIARS
                     LFYQYTLSLKLKMPLNICLEILKKALYFDRDNDAYRIYIIDNLFQTYQHELINRYLKI
                     ILNNRYDCFLKTLCDNSLNV"
BASE COUNT          491 a          185 c          120 g          442 t
ORIGIN      
        1 aacattcaaa gaattatcac ataaagtttt taaaaaacaa tcatatctat tatttaaaat
       61 tatttttaaa taacgattta taagttcatg ttgataagtt tgaaataagt tatctattat
      121 atagatccta taagcatcat tatctctatc aaaataaagt gcttttttca aaatttccaa
      181 gcatatattt aaaggcattt tcaattttaa agataaagta tattgataaa agagagatct
      241 agctatttgc aaatcattta atcccaaaga aaataaattc ctttgaatta tatcaaatcg
      301 ttcttgtacg ttaaatatat cttcatacgc aatcaatata tctttcccag aaatcatcat
      361 agcagctcta gaaaaggctg atactttagg agaataaata gcataagctt tagacattaa
      421 atttatctca aaaaaaactc tttgaagtga agaaaaagtc tgatttataa attcatcaac
      481 ggtaaaaatt ttatttttag gtaaaatttt attctcaaca atatagttta ataatttcat
      541 atttgattta acatcctgcc caaaaataat aatttttaca tttgcattag tatgtctttt
      601 aataatttct aatgcaattt cataagggaa aaatctttct tctaaaactt tgcgaccagc
      661 atgctttctc aaactagaat atacgatatc tccacccctg atatgcaaag caataaaatt
      721 attaattttt tcattaatca cattaacatt atcaaaaatt tgctgataat cagaagaaaa
      781 aataaattta ttattataaa tatctcgaac tatacataga aattcttctt ttttacaatc
      841 tttcaaccaa taatacggag gaatatcagt tgaataccat ccccattcgt tctcaaaagg
      901 aggagattta atttcatcaa aagttctaat cttggaatgc aacttaaaac catgattttt
      961 ttgtatttta taatcagtta tataatactt cttgagaaaa aaataagaaa aaatagaaga
     1021 aacattttcc atatcattag caaaataata tatatcttca gatatttttg ttctaatatc
     1081 aaacctatcc aaatcaatag aattatccca tacaaaacca aaattaaatc ctagtttttc
     1141 agccaaatac atacctataa gcatgctcga taatctcatt ccaaatccat ctggttttgc
     1201 agatataata taaggctttt ctccaagttg taatgtaa
//
LOCUS       DAPIWB010000124         1237 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.126, whole genome shotgun sequence.
ACCESSION   DAPIWB010000124 DAPIWB010000000
VERSION     DAPIWB010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1237)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1237)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1237
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.126"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..867)
                     /locus_tag="RJ266_001656"
     CDS             complement(<1..867)
                     /locus_tag="RJ266_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002876186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDV7355373.1"
                     /translation="MAKISILTPCFNHEKYVSYFLQSVLEQSFSDFELIIVDDCSSDN
                     STKEIQKFKDPKIKLIKHEFNKGINATLNTAFENSNGEYIVFCASDDILEKNALEIIY
                     KTFKDNDIIAVYPNLICIDENNEILGNLYPLKQRNKVELLYYLFMRYNCLTSVGLSLK
                     RDVFEKLYPLPNSMCNYQDMKMHIDILNIGEIKILETQLIRYRRTRDKTNISAHNSIT
                     TTRENLETEMLLDTYLKFDNIFLLEQIFHKEVNKTNIKPYQETLPFFLGIMALESDNI
                     YKKYWGYHKIMEF"
BASE COUNT          415 a          149 c          129 g          544 t
ORIGIN      
        1 aaattccatt attttatgat aaccccaata ttttttatat atgttgtcag attctaaagc
       61 cattattcct aaaaaaaaag gcaatgtctc ttgataaggt tttatatttg ttttatttac
      121 ttctttatga aaaatttgct ctaataaaaa tatattatca aattttaagt aagtatctaa
      181 gagcatttct gtttctaggt tttctcgagt tgttgtgatg ctattatgag cacttatatt
      241 tgttttgtcc ctagttcttc tgtatcttat aagttgtgtt tcaagtattt taatttcgcc
      301 aatatttaat atatcaatat gcatcttcat atcttgatag ttgcacattg aatttggtaa
      361 aggatataat ttttcaaaaa catctctttt taaagataat ccaactgatg ttaagcagtt
      421 gtatcgcata aataaataat ataataattc taccttattt ctttgtttta atggatataa
      481 gttccctaaa atttcattat tttcatctat acaaatcaaa tttggatata cagctataat
      541 atcattatct ttaaatgttt tatagataat ttctaaagca tttttttcta atatatcatc
      601 acttgcgcaa aatactatgt attctccatt tgagttttca aaagctgtat ttaatgtcgc
      661 atttatacct ttgttaaatt catgttttat aagttttatt tttggatctt taaatttttg
      721 aatttctttt gtgctattat cacttgaaca atcatctact ataatgagct caaaatcact
      781 aaaactttgc tctagaacac tttgtaaaaa ataactcaca tatttttcat gattaaaaca
      841 tggggttaga atggaaattt ttgccattac tttatccttg taatattata acttatttaa
      901 tttttgagcg ataattttaa atccatcaat acctgaaatt ataaaatagt tttcaaattc
      961 ttgaaagaca ttatatccta taaattcgtt tactaaaata gatttaataa ttttactatt
     1021 attgataatg ggaagttgat attcttgaaa aataaatgct cgaatttaat tatgtgtttc
     1081 aaaacttgtt ttttaaaatt aatttctatg atcaaggttt atatcttttt ttgaaaaatg
     1141 attttaataa tattttagac tatttataga tatttcttat atttttcttt tgcaatttca
     1201 tattcttgtt ttgaaatgtt aaaataaaaa ttatcaa
//
LOCUS       DAPIWB010000125         1209 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.127, whole genome shotgun sequence.
ACCESSION   DAPIWB010000125 DAPIWB010000000
VERSION     DAPIWB010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1209)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1209)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1209
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.127"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            102..>1209
                     /locus_tag="RJ266_001657"
     CDS             102..>1209
                     /locus_tag="RJ266_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HDV7355374.1"
                     /translation="MNYYQELKKYLNNNLFTSYSLEIDFPKIYNFNANQKAFRDILTK
                     ITKIYDKNKFIKQNEHQFEDEFISKVLEILGWCFVRQDEKIIQGKLEKPDFLLFSNDK
                     LKSKYENLDKETKKSSNDFTIILESKAYNIEIDNKKVKDNPHFQILRYLGNLKKNYGF
                     LTNGRFWRFYDNSILNSNKVFYEINLEKIIEDQNIEAFAYFYSVFSAFNFTEKEDHLE
                     ITLQNNKLSKIKIEDDLKSIIYGTNGNESLFEFIGSRIYNKTKADLKLIYENSLYFIF
                     RLLFIAYFEDKFEIILEKHKYFKSKISLRTLLENLQEDENSSGGFGELENIFNIYNKG
                     KGNFDMPVFNGGLFDESKTALLSTPKIFNDKDLKF"
BASE COUNT          518 a          152 c          148 g          391 t
ORIGIN      
        1 tccaactaaa aaatcatttt cataaataag cacaagtctt taaagttttt tagatataat
       61 ttaaaatgtc aaatttttaa aaatacttta gaaagaaagc catgaattac tatcaagaac
      121 ttaaaaaata cctcaacaat aatcttttta caagctattc tttagaaatt gactttccta
      181 agatttataa tttcaacgca aatcaaaaag cctttagaga tattttaact aaaattacaa
      241 aaatttacga caaaaataaa tttataaaac aaaacgaaca tcaatttgaa gatgaattta
      301 tatcaaaagt attagaaatt ttagggtggt gctttgtaag acaagatgaa aaaatcatac
      361 aaggaaaatt ggaaaaacct gattttctac tttttagcaa tgacaaatta aaatcaaaat
      421 acgaaaattt agacaaagaa acaaaaaaat caagcaatga tttcacaatc attttagagt
      481 caaaagctta taatatagaa atagacaata aaaaagtaaa agacaaccct cactttcaaa
      541 ttctaagata tctaggcaat cttaagaaaa attatggttt tttaaccaat ggtagatttt
      601 ggcgttttta tgataattct atactgaatt caaacaaagt tttttacgaa atcaatctag
      661 aaaaaatcat tgaagatcaa aatattgaag cttttgcgta tttttatagt gtgtttagcg
      721 cttttaattt cacagaaaaa gaagatcatt tagaaataac tctacaaaac aataaacttt
      781 caaaaatcaa aatagaagat gatttaaaat ctatcattta cggaaccaat ggaaatgaat
      841 ctttatttga attcataggc tctagaattt acaataaaac aaaggcggat ttaaaactaa
      901 tctatgaaaa ttctttatat tttatcttta ggcttttatt tattgcttat tttgaagata
      961 aatttgaaat tatactagaa aaacataagt attttaaaag taaaatcagt cttagaacct
     1021 tacttgaaaa tttacaagaa gatgaaaact caagtggtgg ctttggagaa cttgaaaata
     1081 ttttcaacat ttacaacaaa ggcaaaggca attttgacat gcctgttttt aatggcggtt
     1141 tgtttgatga gagcaaaacc gctcttttaa gcacgccaaa aatctttaac gataaagatt
     1201 taaaattca
//
LOCUS       DAPIWB010000126         1201 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.128, whole genome shotgun sequence.
ACCESSION   DAPIWB010000126 DAPIWB010000000
VERSION     DAPIWB010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1201)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1201)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1201
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.128"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..164
                     /locus_tag="RJ266_001658"
     CDS             <1..164
                     /locus_tag="RJ266_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7355375.1"
                     /translation="ILNLLKSKAKSLNLALNYYIIISKNGFSKEFDKICEQNLLLLDL
                     NDFKILLEE"
     gene            168..1187
                     /gene="flgS"
                     /locus_tag="RJ266_001659"
     CDS             168..1187
                     /gene="flgS"
                     /locus_tag="RJ266_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fla regulon two-component system sensor
                     histidine kinase FlgS"
                     /protein_id="HDV7355376.1"
                     /translation="MNESILKSLDSNEKETLQKGLESLIEQTYVIENEYKTLNENYNS
                     LRAMVDEIIEVLPSALWILDKEKNIILQNQEALKNPKLLSIISLDKIRDELEFEGRFY
                     AVKIIAHNEKTIVSATDISDEKRNERLASMGSVAAHLAHEIRNPIGSISLLASTLFAR
                     SELKNKHIVLEIQKAIARVERIVNSTLLFTKGVHINALNFNLLELKEECESAINSYNF
                     TSQIDFEISFLDKQICADKALLGLVLQNLIYNAIDAIEESECEKPMIKILASYDNEKI
                     CIRVYDNGCEIKDEKLVFEAFKTTKLKGNGLGLSLSKEIINAHKGELSFQSDPKNFYF
                     TLPLV"
BASE COUNT          444 a          145 c          209 g          403 t
ORIGIN      
        1 atattttaaa tcttttaaaa tcaaaagcaa agtctttaaa tttggctcta aattattaca
       61 ttataatctc aaaaaatggt tttagcaagg aatttgataa aatatgcgaa cagaatttgc
      121 ttttacttga tttgaatgat tttaagattt tattagagga atgataaatg aatgaaagta
      181 ttttaaaaag tttagactca aatgaaaaag aaaccctaca aaaaggctta gaaagtctta
      241 tagaacaaac ttatgtaata gaaaatgaat acaaaacttt aaatgaaaac tataactcct
      301 tacgcgcaat ggttgatgag attatagagg tgttgcctag tgcgctttgg attttagata
      361 aagaaaaaaa tattatttta caaaatcaag aagccttgaa aaatccaaaa ttacttagta
      421 tcattagtct tgataaaatt cgtgatgagc ttgaatttga aggtaggttt tatgcggtaa
      481 aaatcatagc gcataatgaa aaaactatag tttcagctac agatattagc gatgaaaaac
      541 gcaatgaaag gcttgcaagc atgggtagtg tagcggctca tttggcacat gagataagaa
      601 atcctattgg atctatatct ttacttgctt caaccctttt tgctcgtagt gagcttaaaa
      661 ataagcatat agttcttgaa atccaaaagg ctattgctag agtggagcgt atcgtaaatt
      721 caactctact ttttactaag ggtgtacaca tcaatgcttt aaattttaat cttttagagt
      781 taaaagaaga gtgtgaaagt gccattaact cttataattt cacttctcaa atagactttg
      841 aaatatcttt tttggataag cagatttgcg ctgataaagc tcttcttggt ttggttttgc
      901 aaaatttgat ttataatgct attgatgcga tagaagaaag cgaatgtgaa aagcctatga
      961 ttaaaatttt agcaagttat gataatgaaa aaatatgcat cagagtgtat gataatggtt
     1021 gtgaaataaa agatgagaaa ttggtttttg aagcttttaa aacaacaaaa cttaaaggca
     1081 atggacttgg cttgtctctt tctaaagaaa tcataaacgc tcataaggga gagttaagtt
     1141 ttcaaagtga tcctaagaat ttttatttta ccttaccttt ggtgtgataa atattttctt
     1201 t
//
LOCUS       DAPIWB010000127         1163 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.129, whole genome shotgun sequence.
ACCESSION   DAPIWB010000127 DAPIWB010000000
VERSION     DAPIWB010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1163)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1163)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.129"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..>1163
                     /locus_tag="RJ266_001660"
     CDS             <1..>1163
                     /locus_tag="RJ266_001660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355377.1"
                     /translation="SNSRIPGGLQAGLNQKNINLYNLSIGGTDSIHKIYELKRKENKD
                     LIQNADLIILEVNLMDVTMSFCYKNLDFKIIKYINYLYEQLYLLKKKILVLLLFDLRC
                     INDNKNKSANFITKIHKQLSLFYDFNLIDLHQKMIDTKCFKFYTASLDPYHLLATIMY
                     QLGKNISENLNYFKFSERKLIFETNAIFKVLSPSDLISNPCLKAYKDLIYNDKYVEIL
                     DKDLISFPKPYIGYKILGVHTFLPTKKGVLSSYQSMCENYFSMVFKNSKKEIVKSFRC
                     YNNFDWLYDDFVIDSDTIVMYNKDNLPITEISYETTIINNLSNTSDKASIVNFLLVKD
                     DPNFIQIKNNFSQYKYTKDFSYLIPPIEMYRDIIEEYTLKTSKLIEITSLNQQ"
BASE COUNT          475 a          140 c          131 g          417 t
ORIGIN      
        1 agcaattcaa gaattcctgg tggacttcaa gctggcttaa atcaaaaaaa tattaacttg
       61 tataatctat ctataggtgg gacagattct atacataaaa tttatgaact taaaaggaaa
      121 gaaaataaag atttgattca aaatgctgat ttgattatac ttgaagtaaa tctaatggat
      181 gtaacgatga gtttttgtta caaaaatctt gattttaaga taattaaata tatcaattat
      241 ctttatgagc aattatactt attaaaaaag aaaattttag ttttattact ttttgactta
      301 agatgcataa acgataataa aaacaaaagt gctaatttta ttacaaaaat tcataaacaa
      361 ttaagtttat tttatgattt taatctgatt gatttgcatc aaaaaatgat tgatacaaaa
      421 tgttttaagt tttatactgc atccctagat ccctaccatc tcctagctac tataatgtac
      481 caacttggaa aaaatatttc tgaaaactta aattatttta aattttcaga aaggaaatta
      541 atttttgaga caaatgcaat ttttaaagtt cttagtccat ctgatttaat atctaatcct
      601 tgccttaaag catataaaga tctaatttac aatgataaat atgttgaaat tttagataaa
      661 gatttaattt cttttccaaa accatatata ggctataaaa ttttaggagt acatactttt
      721 cttccaacta aaaaaggagt attatcttct tatcaatcaa tgtgtgaaaa ctactttagc
      781 atggttttta aaaattcaaa aaaagaaata gtaaaaagtt ttagatgtta caacaatttt
      841 gattggctat atgatgattt tgtaatcgat agtgatacta tcgttatgta taataaagac
      901 aatctgccta taacagaaat ttcttatgag acaactataa ttaataatct atccaataca
      961 tcagataaag catctatagt caatttttta cttgttaaag atgatccgaa tttcattcaa
     1021 ataaaaaata atttttcgca atataaatat acaaaagatt tttcatattt aattccacct
     1081 atcgaaatgt atagagatat tatagaagaa tatacactaa aaacaagtaa attaattgaa
     1141 ataacttcac taaaccaaca aat
//
LOCUS       DAPIWB010000128         1128 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.130, whole genome shotgun sequence.
ACCESSION   DAPIWB010000128 DAPIWB010000000
VERSION     DAPIWB010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.130"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..1096)
                     /locus_tag="RJ266_001661"
     CDS             complement(<1..1096)
                     /locus_tag="RJ266_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HDV7355378.1"
                     /translation="MKTSFLAHSVAIVRSNFKGLLFTACIVIFAMYLSSVQSIKDTTH
                     LAATAFAIIIGVLLSPWFFKYQHHFQAGVHFSAKKLLRLGIVLYGFNITLTELLSVGL
                     KGFLLSAIVIFFVFIIALFVGTKIFKLDKETSMLVGAGSAICGAAAVLALESSLKSDP
                     FKGILAVGTVVIFGLVFMFLYPIAFSLNLFPFFDQNAMGVFMGATLHEVANVAGAAEM
                     AKDMAGFEQGASNVAVIIKMMRVILLVPFLLIVTYFFAKNQHSSSGKTAKSITIPYFA
                     FAFLGMIVLNTYLASKESILGIATSDIISLGKTLCTLCIVFAMAALGLQIDFKKFLKS
                     GSRVFGLAFVLGLVLIFGGYFLTLAFKGILW"
BASE COUNT          448 a          229 c          145 g          306 t
ORIGIN      
        1 accaaagtat acctttaaaa gctaaggtta aaaaatatcc tccaaaaatc aaaacaagcc
       61 ctaaaacaaa agccaagcca aataccctag agccactttt taaaaatttt ttaaagtcaa
      121 tttgcaagcc taaagctgcc atagcaaaaa cgatacataa agtacaaagt gttttaccta
      181 aagagatgat atcactcgta gcaataccta aaatactttc tttgcttgct aaataagtat
      241 ttaaaactat catgcctaaa aatgcaaaag caaaataagg tatagtgata ctttttgcag
      301 tttttccact gcttgaatgt tgatttttag cgaaaaaata agtcactata agcaaaaaag
      361 gcacaagtaa aatcactctc atcattttta taatcactgc aacattagaa gcaccttgct
      421 caaatcctgc catatccttt gccatttcag cagcacctgc gacatttgcc acctcatgca
      481 acgtagctcc cataaaaaca cccatagcat tttgatcaaa aaaaggaaaa agatttaaag
      541 aaaaagctat gggatataag aacataaata caagtccaaa aatcaccacc gtacctacag
      601 ctaaaattcc cttaaaagga tcacttttca aacttgactc tagtgctaaa accgctgccg
      661 caccgcaaat cgcacttcca gctccaacaa gcatagaagt ttctttatcg agtttaaaaa
      721 ttttcgttcc cacaaataaa gcaataataa aaacaaaaaa tatcactata gcagaaagca
      781 aaaatccttt caatcctacg cttaaaagct cagttaaagt gatattaaaa ccatataaaa
      841 caatgccaag tcttaaaagt tttttcgcac taaaatgcac tccggcttga aaatgatgtt
      901 ggtatttaaa aaaccaagga gaaagcaaca ctcctatgat aatagcaaaa gcagtcgctg
      961 ctaaatgagt ggtatctttg atactttgaa cactagaaag atacatagca aaaatcacta
     1021 tacaagcagt aaaaagcaaa cccttaaaat ttgatcgcac tatagccacg ctatgtgcta
     1081 aaaaacttgt tttcatttat tttccttttt gtaaattttg tgttatta
//
LOCUS       DAPIWB010000129         1083 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.131, whole genome shotgun sequence.
ACCESSION   DAPIWB010000129 DAPIWB010000000
VERSION     DAPIWB010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1083)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.131"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..766
                     /locus_tag="RJ266_001662"
     CDS             <1..766
                     /locus_tag="RJ266_001662"
                     /inference="COORDINATES: protein motif:HMM:NF013882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HDV7355379.1"
                     /translation="FIINLKIAKDRKEYMQNLCLKHNLDYEIIQAVDGKELDSDFVKN
                     ISDFSLSEKYLGRTLSLGEIGCALSHKKCFERMFELNLNECLILEDDAYFDEKLNYIL
                     SLKDKFPKDLELFLLGHYRQVYLDDGFRIESPFSLRYDYKIDDFYHAKRLVGGGNGTH
                     GYYINKNGALKMYKYLEKIIFPYDHCTSNDNIINVYALYPVVITTDEIFGAQTYVQDD
                     NKRRYRKRSKISKYIKKIKNKIIFFIPSLKKLRKYE"
     gene            759..>1083
                     /locus_tag="RJ266_001663"
     CDS             759..>1083
                     /locus_tag="RJ266_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002869613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular biosynthesis protein"
                     /protein_id="HDV7355380.1"
                     /translation="MNNFVLYSLYFIYSAFFLNKHRRIIKGKILHQKEHENIANYLEN
                     AYIKKYFENKLDDIQIKKTRNINGKKIIWQFWYQGIDNAPCIIKKCFKSVQKYKGNYE
                     VVLLDK"
BASE COUNT          455 a           85 c          165 g          378 t
ORIGIN      
        1 ttttataatc aatttaaaaa tagccaaaga tagaaaagaa tatatgcaga atttatgttt
       61 aaagcataac ttagattatg aaatcataca agctgttgat ggaaaagagt tggatagtga
      121 ttttgtaaaa aatattagtg atttttcttt atcggaaaaa tatttaggta gaactttaag
      181 tcttggtgag atagggtgtg ctttatccca taaaaaatgt tttgaaagaa tgtttgagtt
      241 aaatttaaat gagtgtttga tattggaaga tgatgcttat tttgatgaaa aattaaatta
      301 tattttaagt ttaaaagata aatttccaaa agatttagaa ttattcctac ttggtcatta
      361 taggcaagtt tatttagacg atggatttcg tatagaaagc ccattttctt taagatatga
      421 ttataaaata gatgattttt atcatgcaaa aagattagtt ggtggtggca atggaaccca
      481 tggatattat atcaataaaa atggtgcctt aaaaatgtat aaatacttag aaaaaataat
      541 atttccatat gatcattgta ctagtaatga taacataata aatgtatatg ctttatatcc
      601 tgttgttata actactgatg agatatttgg agcccaaact tatgtgcaag atgataataa
      661 aagaagatat agaaaaagaa gtaaaatttc aaaatatata aaaaagataa aaaataaaat
      721 catatttttt atacctagtt taaaaaaatt gagaaaatat gaataatttt gtattatata
      781 gcttgtattt tatttattct gcatttttct taaataaaca tagaagaatt ataaaaggta
      841 agatcttaca tcaaaaagaa catgagaata tagctaatta tttggaaaat gcttatataa
      901 aaaaatactt tgaaaataaa ttagatgaca tacagataaa aaaaacacgg aatataaatg
      961 gtaaaaaaat aatatggcaa ttttggtatc aaggtattga taatgcacct tgcattataa
     1021 aaaagtgttt taaatctgtt caaaaatata aaggtaatta tgaagttgtt ttacttgata
     1081 aag
//
LOCUS       DAPIWB010000130         1074 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.132, whole genome shotgun sequence.
ACCESSION   DAPIWB010000130 DAPIWB010000000
VERSION     DAPIWB010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1074)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.132"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..>1074)
                     /locus_tag="RJ266_001664"
     CDS             complement(<1..>1074)
                     /locus_tag="RJ266_001664"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355381.1"
                     /translation="VENKILPKNKIFTVDEFINQTFNIFERTFFEMNLMSHALKIYTP
                     GIQAQKSAFSQCAMMIAGRKNIISYHEIFSLKQQYQIIKSNLGLLGLDSLYDSMAYFQ
                     LYKLSRILNLTLDLSLNYIKKAMELDQDNDAWGIHYIYCCFLLGDLEAIETFLKVLLD
                     SNKLNNLLQTFIISKSMRIYKEQEDCFISFRSTKIYPMINYVGIWLNYHYGEFVRMYK
                     MYKNYQKYFNDLEVDTQCFFSCYQKKDLISNSAVLIVKNHLSYKLGKILLECKNLKDF
                     VEIPIIIKYFLWESKNEKAYFKSFLFEIEKLDDYNQSCSITNYLSYQLGKLIIESFKG
                     WYKGYLLLLPYRAFILYRKIKKD"
BASE COUNT          416 a          152 c          107 g          399 t
ORIGIN      
        1 tatctttttt tattttccta taaagaataa aagctctata gggcaacaat aataaataac
       61 ctttatacca acctttaaaa ctttcaataa ttaactttcc aagttgataa gacaaataat
      121 ttgtaatgct acaactttga ttataatcat ccaatttttc tatctcaaat aagaacgatt
      181 tgaaatatgc tttttcattt ttagattccc aaagaaaata ttttataata attggaattt
      241 caacaaaatc ttttaaattt ttacattcca atagaatttt acccaacttg taacttaaat
      301 gattttttac aattaataca gcactatttg atataagatc ttttttttga tagcaagaaa
      361 aaaaacattg tgtatcaact tctaaatcat taaaatattt ttgataattt ttatacatct
      421 tatacattct aacaaattct ccataatgat aatttaacca tatgccaaca taatttatca
      481 tgggatatat ctttgtggat cgaaaagaaa taaaacaatc ctcttgttct ttataaattc
      541 tcatagattt agagataata aaagtttgaa gtaaattatt taatttatta ctatcaagca
      601 atactttcaa aaaagtttct atagcttcaa gatcgccaag taaaaaacaa caatatatgt
      661 aatgaatacc ccaagcatca ttatcctgat ctaactccat agctttttta atatagttca
      721 gagataagtc aagtgttaaa tttaaaattc tagaaagctt atataattga aaataagcca
      781 tagaatcata taaactatct aaacctaata gtcctaaatt acttttaatt atttgatact
      841 gttgcttcaa ggaaaatatt tcgtggtaag aaataatatt tttcctgcct gcaatcatca
      901 ttgcgcattg agagaatgct gatttttgag cctgaatacc tggtgtataa atctttaatg
      961 catgagacat caaattcatt tcaaagaatg ttcgttcaaa aatattaaaa gtctgattta
     1021 taaattcatc aacggtaaaa attttatttt taggtaaaat tttattctca acaa
//
LOCUS       DAPIWB010000131         1050 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.133, whole genome shotgun sequence.
ACCESSION   DAPIWB010000131 DAPIWB010000000
VERSION     DAPIWB010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1050)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1050)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.133"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            1..646
                     /locus_tag="RJ266_001665"
                     /pseudo
     CDS             1..646
                     /locus_tag="RJ266_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002814927.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="aminoglycoside 6-adenylyltransferase"
     gene            complement(808..>1050)
                     /locus_tag="RJ266_001666"
     CDS             complement(808..>1050)
                     /locus_tag="RJ266_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002928144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355382.1"
                     /translation="LKIGNFKAEEMTLSKNKIVKNKLLDNNISFIENEEGLKVKDLYI
                     LSDAKDVYYVQSKKEENKKLKKSFLIDKKYVLDKDF"
BASE COUNT          394 a          120 c          108 g          428 t
ORIGIN      
        1 tggaaaaatt ttattttatc aagcgcctga aagctttgaa ttctataaag ctgatttacc
       61 taaaaattgg gtgagttttt tggtaatttt taaaaatgga gtgagagtag actttaaatt
      121 tatcccctta aaatcattga aacattatta taaatttgaa cctttaagca aagtgcttat
      181 agataaagat caaagattta aaaaaactca aagtgagaat gttttttgca ttaagaaacc
      241 aacagaaaaa gattttgatg aaatatgcaa tgagttttat tttactttta caaaattaga
      301 aaaagctctt ttaagaaaac aatttataat gtcaaattat ttgttaaatt ctatgcgtga
      361 aacacttttt gatatgctta gttttaaaat gggacttaaa tttggttttg aaatttggct
      421 aggtaaacaa aatactgata ttctaaactt tttaaagcaa aaagaaataa aaattatctt
      481 aaattctttt aatactactt cacttgaaca aattgaaaaa acaagaaaaa gcttgaaaat
      541 ttatttcaca aaaacaccaa atttgtagca aaaaaagaat gactttaagc ttttttctta
      601 tcgaaaaaat gtaaaaaaat attgcaaaat tttaagaaaa ttataaagtt attttatttt
      661 tctttaatag aaactgcttt tatttcgcat ttttatagtc tttaagttct tttaaactga
      721 tatatttaaa aataagtgca atttatacta aagtaaatat tttaaatacc ttgctcttat
      781 actttgcact ttaactttcc ttttttatca aaaatcttta tctaaaacat attttttatc
      841 tattagaaat gactttttta gtttcttatt ttcttctttt ttgctttgta cataatatac
      901 atcttttgca tctgaaagaa tatataaatc ttttactttt aaaccttctt cattttcaat
      961 aaagctgata ttattatcta ataatttatt ttttacaatt ttatttttac ttagtgtcat
     1021 ttcttctgcc ttaaaattgc ctattttcaa
//
LOCUS       DAPIWB010000132         1019 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.134, whole genome shotgun sequence.
ACCESSION   DAPIWB010000132 DAPIWB010000000
VERSION     DAPIWB010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1019)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.134"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..>1019
                     /locus_tag="RJ266_001667"
     CDS             <1..>1019
                     /locus_tag="RJ266_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7355383.1"
                     /translation="NLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKH
                     GIKPDYVCMLERKAITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVS
                     TYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIRQDLAYAENGNSHPDD
                     YQNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCT
                     EGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKH
                     CRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQ
                     ILGPLL"
BASE COUNT          391 a          139 c          139 g          350 t
ORIGIN      
        1 aatttaagtg atacagctat cattgtttct acaggaccat ctcttactaa acaacttcct
       61 ttattaaaaa agtatgctaa taaagctacg attttttgtg cggattcttc ttatcctatt
      121 ttagctaagc atggtataaa acctgattat gtttgtatgc tagaaagaaa agctattaca
      181 gcagaatttt ttaatcatga ttttggggaa tttgataatg gaatttgttt tattatcaaa
      241 tccatagtac atcctaatgc cataaattac ctaaccaaaa aaaccgataa ttttactata
      301 gtttcaacct atgcaagttt tatacaatat ttaaaattag attattttgg atattttaac
      361 atgggattta gtgttgcaca tatggcttgt tatctttcct tacatttaaa tcataaaaac
      421 atcattttta taagacagga tttagcttat gctgaaaatg gcaattctca tcctgatgat
      481 tatcaaaatt cagctagcta tgaaagcaga aggtatccgc atctttacac tcttgcttat
      541 ggcggaaaag aaaaaatcaa aactcaccat gtctggctta tgtttaaacg aaatttagag
      601 caagatgtgc aaaaaataca aaagtattta gatactaaaa tttacaactg caccgaaggt
      661 ggagcaagga tagaaggaac catagaaaaa ccttttctat gggcttgtga gaatttactt
      721 cataaagatt taaataaacc ttttgaaaaa ttagaacctt taagtttaaa taaacaaaat
      781 gagtttttac ttaaggctta ttataaagtt tgtaaaagta ttaaacattg tagagatttt
      841 agtaataaat ttattaaaag ctatgataaa ataaaaaatt cttttatgag tttacaaaat
      901 tctcaaaaaa atgaaatttt tattcaagaa attattcaag atatagataa aaccaaaact
      961 caaatcgatg agctttataa tactcaaaaa gatttgatac aaattttagg tcccctact
//
LOCUS       DAPIWB010000133         1001 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.135, whole genome shotgun sequence.
ACCESSION   DAPIWB010000133 DAPIWB010000000
VERSION     DAPIWB010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1001)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.135"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..>1001
                     /locus_tag="RJ266_001668"
     CDS             <1..>1001
                     /locus_tag="RJ266_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7355384.1"
                     /translation="GISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKH
                     GIKPDYVCMLERTEITAEFFNHDFGEFDKDIIFICAGVVHPKAIEYLKDRNLVITQKV
                     LAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQ
                     NSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEG
                     GARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCR
                     DFSKILSNDFKKIQSIYLSLNEKEEDINWAIRKIDEFKNKLENIKQMQDLYEILQPLR
                     "
BASE COUNT          374 a          124 c          161 g          342 t
ORIGIN      
        1 ggtataagtg atacagctat cattgtttct acgggaccat ctcttactaa acaacttcct
       61 ttattaaaaa agtatgctaa taaagctacg attttttgtg cggattcttc ttatcctatt
      121 ttagctaagc atggtataaa acctgattat gtttgtatgc tagaaagaac tgaaattact
      181 gctgaatttt ttaatcatga ttttggggaa tttgataagg atattatatt tatttgtgct
      241 ggtgttgttc atccaaaggc gattgagtat ttaaaggata gaaatttagt cataactcaa
      301 aaagttcttg cttttccata ttatataaat cttaaagatt tttcttatgc tgctgtagga
      361 tttagtgttg cacatacatt atcttatcta gcaacttatc taagtcataa aaacatcatt
      421 tttataggac aggatttagc ttatgctgaa aatggcaatt ctcatcctga tgattatcaa
      481 aactcagcta actatgaaag tcaaatgtat gagcatattt taactacagc ttatggaggc
      541 aacggaaaag tcgaaactca tagtatatgg cttttattta aaaattggtt tgaaaatgaa
      601 atgattccaa atactagaaa aatgggtatc accacctaca actgcaccga aggtggagca
      661 aggatagaag gaaccataga aaaacctttt ttatgggctt gtgagaattt acttgataaa
      721 gatttaaata aaccttttga aaaattagaa cctttaagtt taaataaaca aaatgagttt
      781 ttacttaagg cttattataa agtttgtaaa agtattaaac attgtagaga ttttagtaaa
      841 atactcagca atgattttaa aaaaatacaa agtatatatt tgagtttaaa tgaaaaagaa
      901 gaggatatca attgggctat tagaaaaata gatgaattta aaaataaatt agaaaatatc
      961 aaacaaatgc aagatttata tgaaatttta caacctctgc g
//
LOCUS       DAPIWB010000134          990 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.136, whole genome shotgun sequence.
ACCESSION   DAPIWB010000134 DAPIWB010000000
VERSION     DAPIWB010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 990)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 990)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.136"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            20..982
                     /locus_tag="RJ266_001669"
     CDS             20..982
                     /locus_tag="RJ266_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355385.1"
                     /translation="MFIPNKNIRAIIREKLLNQFMQIKLDNLNSYIPKDIVDNIEKYD
                     NEHFYKINHIIKSKHKGFFDFDEKSKNPTSPLNPWAYIRVKNEALTLKASLKSILPAI
                     QRGIIGYNDCNDGSEEIILEFCKQYPSFIPVKYPYEVQIENPQSEENKLYSYYNYVAS
                     FIPQGEWLIKIDVDHIYDAKRLYKSFYIPKKDYDIVVYSKMDFLINDEDAFIVKYKNL
                     DAIINNKSNDHWLIKNNHLKWVESMHEDRYCIEYLDVKKLKIYQTEFLNYHFPYFKRS
                     LDKNKIELIPIDDFSIKEYKDIISSDMVTKEKLLYLKKYIKENQ"
BASE COUNT          434 a           98 c          138 g          320 t
ORIGIN      
        1 tttagcgaag attgcatgct tgtttatacc aaataaaaat ataagggcaa taattagaga
       61 aaaattactc aatcaattta tgcaaataaa acttgataat ttaaattcgt atattccaaa
      121 agatatagta gataatatag aaaaatatga taatgaacat ttttataaaa taaatcacat
      181 tataaaatct aaacacaaag gattttttga ttttgacgaa aaatctaaaa atccaacatc
      241 acctttaaat ccatgggctt atataagagt aaaaaatgaa gcattaactt tgaaagcttc
      301 gttaaaaagt atacttccgg ctatacaaag agggattata ggatataatg attgcaatga
      361 tggaagcgaa gagataatct tagaattttg caaacagtat ccttctttta taccagtaaa
      421 atacccttat gaagtacaaa ttgaaaatcc gcaaagtgaa gaaaataaac tttatagtta
      481 ttataattat gttgcaagct ttattccaca aggagaatgg cttataaaaa tagatgttga
      541 tcatatttat gatgctaaaa gactttacaa aagtttttat atacctaaaa aagattatga
      601 tatagtggtt tattctaaaa tggattttct cataaatgat gaagatgctt ttatagttaa
      661 gtataaaaat cttgatgcta taataaacaa taagagtaat gatcattggt tgataaaaaa
      721 taatcatctt aaatgggtag aaagtatgca tgaagatagg tattgtatag agtatttaga
      781 tgtaaaaaag ttaaaaattt atcaaacaga atttttaaat tatcattttc catattttaa
      841 gagaagctta gataaaaata agatagaatt aattcccata gatgatttta gtatcaaaga
      901 atataaagat atcatatcat ctgatatggt aactaaagaa aaattgctat atttaaaaaa
      961 atatataaag gaaaatcaat gaaaaaatcg
//
LOCUS       DAPIWB010000135          982 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.137, whole genome shotgun sequence.
ACCESSION   DAPIWB010000135 DAPIWB010000000
VERSION     DAPIWB010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 982)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 982)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..982
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.137"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
BASE COUNT          373 a          141 c          120 g          348 t
ORIGIN      
        1 tattataaat ccgtaatttg tgttttaact aatatttata aacatttatt tttaggtatt
       61 tatacttttt aaaaaatcta aatcctattt ataaaagcaa aaaagcgata ttgtgtatta
      121 aatgtaccta gatttttaat aaatttaccc acaaaattcc ttttaaattt aaaaaactaa
      181 aaggaatata aatgccacaa tcccatatca tttcagttct cacagttaaa cattcagaac
      241 ttcaagggta aattactcat caaaaagagc tagtaagaac actcacaaat gagcttgaaa
      301 ctataagcaa gaccatacta atatttgaaa ttttttaagc taaatgaaat caaaatcaaa
      361 agcgttagga ctattttata ttttaagtgt agcacgaact aactaataaa atcttagaat
      421 gtcttaaaaa caggcctagt acagtagatg aaatgagtgt aaattctact accgattgtt
      481 attttattgc taaatttaga caaaatatcc actacacact aaacaaacta aaacaaagaa
      541 acataataaa atagattttc acacttatga gattatctta agtcaacctt gttgaagtgc
      601 taaagatgtc cttaatagca tttacaaata gcacgatagt tgataatagc atttgaagtg
      661 gtagtttatg agcgtgaaat aaagtgccat ttgttacgct aaatctcttt tgacactcat
      721 tgcatttata ctcatttctt gcaatgataa gataaatttt tatccacgtt atcgcaatac
      781 ggacatatag tattgccgtt atgccaccta atatttgcaa acatctttca tcactcattt
      841 tttagctatt ttttagaagt gataactttc tagcgcttga tgatagtaag agatgatgta
      901 ccattttatg ttcttttagt gttattattt attttataat gttggtatta tacatatatt
      961 aaaataaagc caaaatattt ac
//
LOCUS       DAPIWB010000136          902 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.138, whole genome shotgun sequence.
ACCESSION   DAPIWB010000136 DAPIWB010000000
VERSION     DAPIWB010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 902)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 902)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.138"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..>902)
                     /locus_tag="RJ266_001670"
     CDS             complement(<1..>902)
                     /locus_tag="RJ266_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDV7355386.1"
                     /translation="LADEINKNADQTGVRATFTVETRGMGAVRAGATSEDFAINGVKI
                     GKVDYKDGDANGALVSAINSVKDTTGVEASIDENGKLLLTSREGRGIKIEGNIGRGAF
                     INPNMLENYGRLSLVKNDGKDILISGTNLSAIGFGTGNMISQASVSLRESKGQIDANV
                     ADAMGFNSANKGNILGGYSSVSAYMSSQGSGFSSGSGFSVGSGKNYSTGFANTIAISA
                     ASQLSAVYNVSAGSGFSSGSNLSQFATMKTSAGNTLGVKDETAGVTTLKGAMAVMDIA
                     ETAITNLDQIRADIGSVQNQVTST"
BASE COUNT          279 a          206 c          135 g          282 t
ORIGIN      
        1 atagttgatg taacttgatt ttgcaccgaa ccaatgtcgg ctctgatttg atcaagattt
       61 gttatagccg tttcagctat atccatcaca gccatagcgc ctttaagtgt agttacacct
      121 gctgtttcat cttttacacc aagagtattc cctgctgaag ttttcatggt tgcaaactga
      181 gaaagatttg atcccgatga aaaacctgaa cctgcagaaa cattatatac cgcagaaagt
      241 tgcgaagcag ctgaaatagc tatagtgttt gcaaaacctg tagaataatt tttaccgcta
      301 cctacagaaa aacctgaacc tgaagaaaat ccacttcctt ggctactcat ataagcgcta
      361 acagaagaat aacctcctaa aatatttcct ttatttgcgg aattaaagcc catagcatca
      421 gctacatttg catcgatttg ccctttagac tctcttaaag aaacggaagc ttgagaaatc
      481 atattgcctg ttccaaaacc tatagcagaa agatttgttc cactgattaa aatatcttta
      541 ccatcatttt taactaaaga taaacgacca taattttcca gcatatttgg attgataaaa
      601 gcacctctgc ctatattacc ttcaatttta atccctcttc cctctcttga agtaagtaaa
      661 agcttaccat tttcatcgat agaagcttca actccggttg tatctttaac cgaattgatt
      721 gcagaaacca aggctccatt agcatcacca tctttgtaat ctactttacc gatttttacc
      781 ccattgatag caaaatcttc tgaagtagct ccagccctaa ctgctcccat gcctcgagtc
      841 tctactgtaa aagtagctct aacaccggtt tgatcagcat ttttattgat ctcatcagct
      901 aa
//
LOCUS       DAPIWB010000137          897 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.139, whole genome shotgun sequence.
ACCESSION   DAPIWB010000137 DAPIWB010000000
VERSION     DAPIWB010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 897)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 897)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.139"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            54..>897
                     /gene="yibB"
                     /locus_tag="RJ266_001671"
     CDS             54..>897
                     /gene="yibB"
                     /locus_tag="RJ266_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012006735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YibB"
                     /protein_id="HDV7355387.1"
                     /translation="MIDNEITIVTAFYDIGRKDIKNFERDNDKYLSYFEFLAGIKNKM
                     IIYTQENIKEKILDTRKKHNLEDKTIIITKELQEFDEQGYKKIIDTFRNYDQSINRKN
                     PNNIECISPMYCYLMYLKPFFVCDAIQRGLTDGNIMWLDFGFNHGGNFFVDKDQFNFY
                     LQKQNSIDENKINLFSIKNDDKQTLANIYFSMETFLMGGIIFAKSKNWLLFKHHMQKC
                     IKYFTSFGIIDDDQIMLLWCARNYRKNYNIIKVYFWFDSLYHFIPQNIAKKLKINTNQ
                     IKHYK"
BASE COUNT          400 a           87 c          110 g          300 t
ORIGIN      
        1 aaaaaaatta gaaaacattc catgatagat aaaatattat ttaaggatac aatatgatcg
       61 ataatgaaat tacgatagta acagcttttt atgatatagg tagaaaagat attaaaaatt
      121 ttgaaagaga taatgataaa tatttatctt attttgaatt tttagcaggt atcaaaaata
      181 aaatgattat atacacccaa gaaaatataa aggaaaaaat cttagataca agaaaaaaac
      241 ataatttaga agacaaaacc ataataataa ccaaagaatt acaagaattt gatgagcaag
      301 gttataaaaa aataatagat acttttagaa actatgatca aagtataaat agaaaaaatc
      361 caaacaatat agaatgtatt tctcctatgt attgctacct tatgtattta aaaccttttt
      421 ttgtatgtga tgctatacaa agaggtttga ctgatgggaa tataatgtgg cttgattttg
      481 gttttaatca tggaggaaat tttttcgtag ataaagatca atttaacttt tatctacaaa
      541 aacaaaatag tatagatgaa aataaaatta atctcttttc aataaaaaat gatgataaac
      601 aaactttagc aaacatttac ttttccatgg aaacattttt aatgggtggt attatattcg
      661 caaaatcaaa aaattggctc ttatttaaac atcatatgca aaaatgtata aaatatttta
      721 cctcatttgg aataattgat gacgatcaaa taatgctttt atggtgtgct agaaattatc
      781 gaaaaaatta taacattata aaagtttatt tttggtttga ttctttatat cattttatac
      841 cacaaaatat tgcaaaaaaa ttaaaaataa atacaaatca aattaagcat tataaaa
//
LOCUS       DAPIWB010000138          873 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.140, whole genome shotgun sequence.
ACCESSION   DAPIWB010000138 DAPIWB010000000
VERSION     DAPIWB010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 873)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 873)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.140"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..422
                     /locus_tag="RJ266_001672"
     CDS             <1..422
                     /locus_tag="RJ266_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355388.1"
                     /translation="KDFIEYKQNKEIQNKNFIIQEEISKLKQDKQKLLTNIQDLNFTL
                     SNKISSTQQQFHILSTITKEINLDKNKAIILNQIISWLNSNELKITNLEFEQTKIILS
                     FIDENHFKRALENLNSAFKILDKNEETLNIILEVIHE"
     gene            415..>873
                     /locus_tag="RJ266_001673"
     CDS             415..>873
                     /locus_tag="RJ266_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355389.1"
                     /translation="MNKIEVFLQNLNPREKFLFISFICLCALFLAFKIHDHFLEDIFQ
                     KTLVEHNYLALNEAKIENSHLKEIETKLTKQIKTEEEKLKYYKEKLHLFSYDKDFFNK
                     KINNLSKNLTINEIKFSQENKNFIHYNYVSLSLNGNFKDLLNFIQNLENLP"
BASE COUNT          398 a          118 c           74 g          283 t
ORIGIN      
        1 ttaaagattt tatagaatac aaacaaaata aggaaattca aaataaaaat tttatcatac
       61 aagaagaaat ttctaaacta aaacaagata agcaaaaatt attaacaaac atacaagatt
      121 taaactttac tctttccaat aaaatatcat ctacacaaca acaatttcat attttatcca
      181 ccataacaaa agaaatcaat ttagacaaaa ataaggcaat cattctaaat caaatcatat
      241 catggcttaa ctccaatgaa cttaaaatca caaatcttga atttgaacaa acaaaaatca
      301 ttctttcttt tatcgatgaa aaccacttta aaagagcatt agaaaatcta aattctgctt
      361 ttaaaattct tgataaaaat gaagaaacat tgaatatcat attagaagtc atacatgaat
      421 aaaatagaag tatttttgca gaatttaaat cctagggaaa aatttctttt tatttctttt
      481 atctgtcttt gtgctttgtt tttagctttt aaaattcacg atcacttttt ggaagatatt
      541 tttcaaaaaa cattagtaga acataattac cttgcattaa atgaagcaaa aatagaaaat
      601 tcacatctta aagaaataga gacaaagcta acaaaacaga taaaaacaga ggaagaaaaa
      661 ttaaaatact ataaagaaaa attgcattta ttttcttatg ataaagattt tttcaataaa
      721 aaaatcaata atttatccaa aaatttaacc attaatgaaa taaaattttc ccaagaaaac
      781 aaaaatttta tccactataa ttatgtttct ctaagtttaa atggcaactt taaagactta
      841 ctcaatttta tacaaaattt agaaaatctt cct
//
LOCUS       DAPIWB010000139          803 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.142, whole genome shotgun sequence.
ACCESSION   DAPIWB010000139 DAPIWB010000000
VERSION     DAPIWB010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 803)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 803)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.142"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..>803
                     /locus_tag="RJ266_001674"
     CDS             <1..>803
                     /locus_tag="RJ266_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002928619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HDV7355390.1"
                     /translation="INYSCLERIVFSNCEFKSKISLHKIDNSHKIAFCNGIDFANCIF
                     EDDVNFKRFVSGTPLPDNKYYNNERDTIFENCIFNKRVDFHNSKFVNSVYFTNSHFKD
                     YVDFHACEFNKIACFYGVTFDKAPNFSACYFKEPKAVNLINVDIDKLDFKSVEKYIED
                     NYQDETCENKQEITEEQRNNNCKLKCAKHLKDSFRVIKDVLITQNNTLEAQEWHKLEL
                     YAKEKELEIQLSKNKNDNLKKESKNQVYNPKDYEKFNYSKIIPLIIFLL"
BASE COUNT          336 a           78 c          109 g          280 t
ORIGIN      
        1 ataaactata gttgccttga aagaatagtt ttttcaaatt gcgaatttaa atctaaaata
       61 tctttacata aaattgataa tagtcataaa attgcttttt gcaatggtat agattttgca
      121 aattgtattt ttgaagatga tgtaaatttt aaacgctttg tatcaggcac tccattgcct
      181 gataataagt attataataa tgaaagagat actatatttg aaaattgtat ttttaataaa
      241 agagttgatt tccataattc taaatttgtt aatagtgtat attttactaa ttctcatttt
      301 aaagattatg ttgattttca cgcgtgtgaa tttaataaaa tagcttgttt ttatggagtt
      361 acatttgata aagctccgaa tttcagtgct tgttatttta aagaaccaaa agctgtaaat
      421 ttaatcaatg tcgatataga taagctagat tttaaatcag tggagaaata tatagaagat
      481 aattatcaag atgagacgtg tgaaaataaa caagaaataa cagaagaaca gcgtaataat
      541 aattgtaaat taaaatgtgc caaacattta aaagattctt tcagagtcat aaaagatgtt
      601 ttaatcacac aaaataatac cctagaagct caagaatggc ataaattaga actttatgcg
      661 aaagagaaag aattggaaat tcaattaagt aaaaataaaa atgacaattt aaaaaaagaa
      721 tctaaaaatc aagtatataa tcctaaggat tatgaaaaat ttaattattc aaaaattata
      781 cctcttataa tatttttatt aaa
//
LOCUS       DAPIWB010000140          659 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.143, whole genome shotgun sequence.
ACCESSION   DAPIWB010000140 DAPIWB010000000
VERSION     DAPIWB010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 659)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.143"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            19..429
                     /gene="perR"
                     /locus_tag="RJ266_001675"
     CDS             19..429
                     /gene="perR"
                     /locus_tag="RJ266_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide-responsive transcriptional repressor
                     PerR"
                     /protein_id="HDV7355391.1"
                     /translation="MELLQMLKKHELKATPQRLCVLKILKRHEHPNIDELYTEIKKEY
                     PSISLATVYKNLNTLQEQGLVVEINVLNQKTCYDIYEEEHIHVVCTKCGGIEDLSFKD
                     AKLYEYQEHLEKKIGNLVNHLSVCAYVDSCKKCH"
     gene            475..>659
                     /locus_tag="RJ266_001676"
     CDS             475..>659
                     /locus_tag="RJ266_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355392.1"
                     /translation="MVYEIQKNFLLSDCTLLENLKKDNIPFRNSKFETFYTQITSNHS
                     VKFQSFCNEFYKITKFN"
BASE COUNT          268 a           75 c           90 g          226 t
ORIGIN      
        1 aagtaaggaa taaataaaat ggaattacta caaatgctta aaaaacatga gttaaaagct
       61 actccgcaaa gactatgtgt tttaaaaatt ttaaaaagac atgagcatcc taatattgat
      121 gaattatata cagaaattaa aaaagaatac ccttcaatct ctttagcgac ggtttataaa
      181 aatcttaata ctttacaaga acaaggttta gttgttgaaa tcaatgtttt aaatcaaaaa
      241 acttgttacg atatctatga agaagaacat attcatgttg tttgcaccaa atgtggtggt
      301 atagaggatt taagttttaa agatgctaag ctttatgaat atcaagagca tttagaaaaa
      361 aagataggca atctcgtcaa tcatctgtct gtttgtgctt atgttgatag ttgcaaaaag
      421 tgtcattaag caaaataagg ttaaaataac ccatatattt taagggttat tttaatggtt
      481 tatgaaattc aaaaaaactt tttactatct gattgcactc ttttagagaa tttaaaaaaa
      541 gataatatac cttttcgaaa ttctaaattt gaaacttttt atactcaaat aacttcaaat
      601 catagtgtta aatttcaaag tttttgcaat gaattttata aaattacaaa atttaataa
//
LOCUS       DAPIWB010000141          554 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.144, whole genome shotgun sequence.
ACCESSION   DAPIWB010000141 DAPIWB010000000
VERSION     DAPIWB010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.144"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..>554
                     /locus_tag="RJ266_001677"
     CDS             <1..>554
                     /locus_tag="RJ266_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HDV7355393.1"
                     /translation="DFANALANESGKLQTAVQSLTTSSNSQAQSLEETAAALEEITSS
                     MQNVSVKTSDVITQSEEIKNVTGIIGDIADQINLLALNAAIEAARAGEHGRGFAVVAD
                     EVRKLAERTQKSLSEIEANTNLLVQSINDMAESIKEQTAGITQINDSVAQIDQTTKDN
                     VEIANESAIISSTVSDIANNILED"
BASE COUNT          202 a           83 c           98 g          171 t
ORIGIN      
        1 cagactttgc taatgcttta gctaatgaaa gtggaaaatt acaaactgct gttcaaagct
       61 taaccacttc ttcaaattct caagctcaat ctttagaaga aactgcagca gctttagaag
      121 agatcacttc ttctatgcaa aatgtttcag ttaaaactag tgatgttatc actcaatctg
      181 aagagattaa aaatgttaca ggtattatag gtgatattgc agatcaaatc aatcttttag
      241 ctttaaatgc agctattgaa gcagctcgtg ctggagaaca tggtagaggc tttgcggttg
      301 tagctgatga agttagaaag ttagctgaaa gaactcaaaa gtctttatca gaaattgaag
      361 ctaatactaa tttacttgtt caatctatca atgatatggc agaaagtatt aaagaacaaa
      421 ctgcaggtat cactcaaatc aatgatagcg tagctcaaat tgatcaaact actaaagata
      481 atgttgaaat tgctaatgaa tcagctatta tttctagtac agtaagtgat atagctaata
      541 atatcttaga agat
//
LOCUS       DAPIWB010000142          513 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.145, whole genome shotgun sequence.
ACCESSION   DAPIWB010000142 DAPIWB010000000
VERSION     DAPIWB010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 513)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.145"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..213)
                     /locus_tag="RJ266_001678"
     CDS             complement(<1..213)
                     /locus_tag="RJ266_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDV7355394.1"
                     /translation="MGFRINTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADD
                     ASGMAIADSLRSQAATLGQAINNGNDA"
     gene            complement(358..>513)
                     /locus_tag="RJ266_001679"
     CDS             complement(358..>513)
                     /locus_tag="RJ266_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="FlaB; structural flagella protein; in Helicobacter
                     flagella are composed of flagellin A and flagellin B; the
                     amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin B"
                     /protein_id="HDV7355395.1"
                     /translation="VNVKAAESQIRDVDFAAESANYSKANILAQSGSYAMAQANSVQQ
                     NVLRLLQ"
BASE COUNT          159 a           93 c           90 g          171 t
ORIGIN      
        1 agcatcatta ccattgttta tagcttgacc taaagtagct gcttgtgaac gcaaagaatc
       61 tgctatagcc atccctgaag catcatctgc tgcggagttg attctaagac ctgaactaag
      121 tctgcttaaa gacttatcca gctctctagc attaacaact gaatttgcat gtgcgtttaa
      181 tgcaccgatg ttggtgttta tcctaaaacc cattttaaat cctttcaaaa tattgcatcg
      241 aaaagattaa agcaagaagt gttccaagtt tagtttgatt aaaaaatttt agagtttaaa
      301 ataaaaaagc ctagtttaaa ctaggcttgg atttgtatat attgcagctt ttgtaaacta
      361 ctgtagtaat cttaaaacat tttgctgaac agaattagcc tgtgccatgg cataagagcc
      421 actttgagct aagatatttg ctttagagta gtttgcactc tcagctgcaa agtctacatc
      481 acggatttgt gattctgctg ctttaacatt tac
//
LOCUS       DAPIWB010000143          489 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.146, whole genome shotgun sequence.
ACCESSION   DAPIWB010000143 DAPIWB010000000
VERSION     DAPIWB010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 489)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.146"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            62..>489
                     /locus_tag="RJ266_001680"
     CDS             62..>489
                     /locus_tag="RJ266_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355396.1"
                     /translation="MSIFSINDNSNYTSILSQSKESKESKENSKISFANAFLKQNASK
                     LNEIQNANSQTLARSEALNSTNTTNTSNNTNFSISSKTSSPNYDISSEFKNSIYTLKY
                     KQVDISNTSTNTAYGYSVDKDGYMGSDFNKAAGLPEDFKI"
BASE COUNT          207 a           57 c           66 g          159 t
ORIGIN      
        1 ttgcttgtat tattttaata tatttaggtt gaaggcaaaa aatctaaatc aaggaattaa
       61 tatgagtatc tttagtatca atgataactc aaactatact tctatacttt cacaaagtaa
      121 agagagtaaa gaaagtaaag aaaattctaa aataagtttt gctaatgctt ttttaaaaca
      181 aaatgctagt aagttaaatg aaattcaaaa tgcaaattca caaactctag caagaagtga
      241 agcattaaat tctactaata caacaaatac tagcaataat actaatttta gtataagtag
      301 taagacaagt tctcctaatt atgatatatc tagtgaattt aaaaactcta tttatactct
      361 aaaatacaaa caagtagata taagtaatac ttctactaat acagcttatg gttatagtgt
      421 agataaagat ggttatatgg gaagtgattt taacaaagct gcaggacttc ctgaagattt
      481 taagataca
//
LOCUS       DAPIWB010000144          468 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.147, whole genome shotgun sequence.
ACCESSION   DAPIWB010000144 DAPIWB010000000
VERSION     DAPIWB010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 468)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.147"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..>468)
                     /locus_tag="RJ266_001681"
     CDS             complement(<1..>468)
                     /locus_tag="RJ266_001681"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355397.1"
                     /translation="MVLKGCSGHTAFSYFLLWSGYSPSIFRTCNLALKDPNVYYINKY
                     QDLIFFWNYKNILVFEHGMEPKHQDGLKLFYLVLLNKDIYILTRDPLSRLKTWANHII
                     DDYVSLDTEFSLDYDFSQGFKWIKYAFGGDKVDLNQFVYSGPITNESMSVDSF"
BASE COUNT          187 a           82 c           48 g          151 t
ORIGIN      
        1 taaaactatc cacactcatt gactcatttg taattggtcc agaataaaca aactgattga
       61 gatcaacttt atctcctcca aaagcatatt taatccactt aaatccttga ctaaaatcat
      121 aatcaagact aaattcggta tccaatgaaa cataatcatc tatgatatga ttagcccaag
      181 tttttaatct tgataatgga tccctagtta agatatagat atctttattt agcaatacca
      241 aataaaacaa ctttaaacca tcttgatgtt ttggttccat accatgttca aaaacaagaa
      301 tatttttata attccaaaaa aaaattaaat cttgatattt atttatataa taaacatttg
      361 gatcttttaa agcaagatta caagttctaa atatacttgg actatatcct gaccacaata
      421 aaaaatagga aaaagccgta tgaccagaac atcctttaag caccatga
//
LOCUS       DAPIWB010000145          432 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.148, whole genome shotgun sequence.
ACCESSION   DAPIWB010000145 DAPIWB010000000
VERSION     DAPIWB010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 432)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 432)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.148"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..>432)
                     /locus_tag="RJ266_001682"
     CDS             complement(<1..>432)
                     /locus_tag="RJ266_001682"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355398.1"
                     /translation="LKLHDNNSKIFLNIKDINLSNEGGDTIINGGYIEALMNKNLEIK
                     NIKIHFDMINFSQFYTKFVLQNLNYEQFFNNPVQFYELNLFSKSQQQINFDYLVLDNN
                     KINSFYSKNLVNFNEENSTINLNIQGKSNEIDIDLKSLLGQN"
BASE COUNT          148 a           44 c           51 g          189 t
ORIGIN      
        1 attctgaccc aataaagatt taagatcaat atcaatttca ttggattttc cttgtatgtt
       61 taagtttatt gttgaatttt cttcattaaa atttactaga tttttgctat aaaaagaatt
      121 gattttattg ttatctaaca caagataatc aaagttgatt tgttgttggc ttttgctaaa
      181 taaatttaat tcataaaatt gtacaggatt gttaaaaaat tgttcgtaat ttaaattttg
      241 caacacaaat ttagtataaa attgagaaaa attaatcata tcaaaatgta ttttaatgtt
      301 tttaatttct aaatttttat tcattaaggc ttcaatatat ccgccgttta tgatggtatc
      361 tccaccttca ttgcttaaat ttatatcttt aatatttaga aatattttag agttgttatc
      421 gtgtaatttg ag
//
LOCUS       DAPIWB010000146          391 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.149, whole genome shotgun sequence.
ACCESSION   DAPIWB010000146 DAPIWB010000000
VERSION     DAPIWB010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 391)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 391)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.149"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..>391
                     /locus_tag="RJ266_001683"
     CDS             <1..>391
                     /locus_tag="RJ266_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDV7355399.1"
                     /translation="KAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEEL
                     DNIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKASIGATQSSKIGLTRFETGSRIS
                     VGGEVQFTLKNYNGIDDFKFQKVVISTS"
BASE COUNT          150 a           62 c           69 g          110 t
ORIGIN      
        1 ataaggctat ggatgagcaa cttaaaatct tagatacaat caaaactaag gcaactcaag
       61 cggctcaaga tggacaaagt ttaaaaacaa gaaccatgct tcaagcagat atcaaccgtt
      121 taatggaaga acttgacaat atcgcaaata ctacttcatt taacggtaag caacttttaa
      181 gtggaaattt tatcaatcaa gaatttcaaa tcggtgcgag ttcaaatcaa actgtaaaag
      241 caagtatagg agcaacccag tcttctaaga taggtttaac tcgttttgaa acaggatcaa
      301 ggatttcagt tggtggtgaa gtgcaattta cccttaaaaa ttacaatggt atagatgatt
      361 ttaaatttca aaaagttgtg atttcaactt c
//
LOCUS       DAPIWB010000147          376 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.150, whole genome shotgun sequence.
ACCESSION   DAPIWB010000147 DAPIWB010000000
VERSION     DAPIWB010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.150"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            <1..160
                     /locus_tag="RJ266_001684"
     CDS             <1..160
                     /locus_tag="RJ266_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355400.1"
                     /translation="VFIIVTRYEKKIKLLNQNIQNMKEDIADLKETTQKNRSLIEKNR
                     SNIENIIK"
     gene            complement(163..>376)
                     /locus_tag="RJ266_001685"
     CDS             complement(163..>376)
                     /locus_tag="RJ266_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355401.1"
                     /translation="LDIFPSGMSYKYGILKDSMHIILQGKTSSTMLFPFLKSMIYKNK
                     SENSSEKIFTLMINQKKHYKLIANLS"
BASE COUNT          158 a           52 c           42 g          124 t
ORIGIN      
        1 agtctttatc atcgttactc gctatgaaaa aaagataaaa ttactcaacc aaaacataca
       61 aaatatgaaa gaagatatag ccgatcttaa agaaacaact caaaaaaatc gctctttaat
      121 tgaaaaaaat cgctctaata tagaaaatat aataaaataa aactaagaaa gatttgcgat
      181 aagcttatag tgttttttct gatttatcat taaagtaaaa attttttcac ttgaattttc
      241 gcttttattt ttataaatca tactttttaa aaacggaaaa agcatcgtac tagaagtttt
      301 accttgtaaa ataatatgca tagagtcttt taaaattccg tacttatagc tcataccgct
      361 tggaaatata tcaaga
//
LOCUS       DAPIWB010000148          365 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.denovo.151, whole genome shotgun sequence.
ACCESSION   DAPIWB010000148 DAPIWB010000000
VERSION     DAPIWB010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 365)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 365)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.denovo.151"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            61..>365
                     /locus_tag="RJ266_001686"
     CDS             61..>365
                     /locus_tag="RJ266_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355402.1"
                     /translation="MLIIGHKLLKNLDFSFIESVEEVKDNKVYCIVYDEKLISYLSQN
                     DFEFAILVQNKDEIFLANALGAKFLLCNDKKLAKFASKVAEFYVFDSRVLMIVDKLE"
BASE COUNT          140 a           21 c           60 g          144 t
ORIGIN      
        1 ttggtaacaa ttttataagt ataatttgca aaataataaa aaatagagct aaggaaaaaa
       61 atgcttatta ttggacataa attattaaaa aatttagatt tttcttttat tgaaagtgtt
      121 gaagaagtta aagataataa agtttattgt attgtttatg atgaaaaatt gatttcttat
      181 ttaagtcaaa atgattttga atttgctatt ttagttcaaa ataaagacga gatattttta
      241 gccaatgctt taggagctaa gtttttgctt tgtaatgata aaaaacttgc aaaatttgct
      301 agcaaggttg cagaatttta tgtttttgat agtagggttt taatgattgt tgataaatta
      361 gagaa
//
LOCUS       DAPIWB010000149        24911 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.guided.016, whole genome shotgun sequence.
ACCESSION   DAPIWB010000149 DAPIWB010000000
VERSION     DAPIWB010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24911
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.guided.016"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            108..881
                     /gene="surE"
                     /locus_tag="RJ266_001687"
     CDS             108..881
                     /gene="surE"
                     /locus_tag="RJ266_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002926992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HDV7355403.1"
                     /translation="MKEILITNDDGYESEGLKKLIKMLQKEFKAKITIVAPASEKSAC
                     SHSITLTKPLRFVKVGKRFYKLDDGTPADCVYLALHALYKTRLPDLVISGINKGANVG
                     EDITYSGTCAGAMEAVLQGIPAIALSQFYKKSEKELDFKNALKITKKIVQNIFDKGFP
                     LGKKEFLNINFPAKSNIKGIKICKAGKRVYNFEAHSNINPRGVEYYWLAAANLDFEDE
                     KNSDIALLKKGYATITPIMLDLTAYERMKKVKKWLKAKE"
     gene            878..1534
                     /locus_tag="RJ266_001688"
     CDS             878..1534
                     /locus_tag="RJ266_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002926987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
                     synthase TcdA"
                     /protein_id="HDV7355404.1"
                     /translation="MNDRFTRIKWLVGEEKFQKISQTKVLVCGLGGVGGICVDALYRS
                     GFKNLTLIDADKFEITNQNRQIHSENIGEEKAKVFERIYKAKGIVSKIDEDFLEKFDL
                     SEFDLIIDAIDDIPAKVALAHLIDFKKQIFISSTGGARKLDPTRIKTTSIFKTHGDAL
                     AKKFRYELRKSGFKGNFDVVFSDEEAHCKDLGSFMGVTASFGLALASLALRKVLAKKS
                     "
     gene            1518..1964
                     /locus_tag="RJ266_001689"
     CDS             1518..1964
                     /locus_tag="RJ266_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV7355405.1"
                     /translation="MLRKADIKDLNACLSLFEQSVKTLCAKDYTKDQICAWIKIDRQQ
                     WEEKFKYDEIFVYEKRGKISVKQEQKLLDLLFTHPDFVRQGLAQNLLDFILKTYLHNE
                     IYTFASLSAKDFFLKNGFELIRENKVIKEGQNLKKFLMKKDVVYKN"
     gene            complement(2075..2455)
                     /locus_tag="RJ266_001690"
     CDS             complement(2075..2455)
                     /locus_tag="RJ266_001690"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HDV7355406.1"
                     /translation="MNITLLKSKIHRASVTEARLDYVGSISIDEKLLQASGILEYEKV
                     QVVNVNNGARFETYTIATQEEGVVCLNGAAARLAEVGDKVIIMSYADFNEEEAKTFKP
                     KVVFVDENNTATKITNYEKHGAIF"
     gene            complement(2452..3300)
                     /locus_tag="RJ266_001691"
     CDS             complement(2452..3300)
                     /locus_tag="RJ266_001691"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HDV7355407.1"
                     /translation="MQVITSVKEAKQIVKDWKSHQLSIGYVPTMGFLHDGHLSLVKHA
                     KTQDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDNGVDMVFIPDATQMYLKNF
                     STYVDMNTITDKLCGAKRPGHFRGVCTVLTKFFNILNPDIVYMGQKDAQQCVVVRHMV
                     DDLNFDLKIQICPIIREEDGLAKSSRNVYLSKEERKASLTISQSIFLAEKLVREGEKN
                     TSKIIQAMKDILEKEKLIKIDYIELVDFNTMENIENITDNVLGAVAAFVGKTRLIDNF
                     LVQGLK"
     gene            complement(3311..4135)
                     /gene="panB"
                     /locus_tag="RJ266_001692"
     CDS             complement(3311..4135)
                     /gene="panB"
                     /locus_tag="RJ266_001692"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HDV7355408.1"
                     /translation="MRKSMISFLEKKAKNEKITMVSAYDYHSARILDNSDIDIILVGD
                     SLAMTVLGMQDTLSVTMDEMLIFTKAVSRGAKKSFVLADMPFMSYQSSDRDAILNASR
                     FIKESHANGVKVEGGIEIASKIKLISQSGIPVVAHLGLTPQAVNMLGGYRVQGKDLQS
                     AQKIIDDAKAVQDAGACMLVLECVPVKLAQKISSILEIPTIGIGSGKYCDGQVLVYHD
                     LLGLNKDFKAKFVKHFDKIDPQVGVEKYRDEVKSGIFPSQEHSFDYLDDELLDKLY"
     gene            4356..5129
                     /locus_tag="RJ266_001693"
     CDS             4356..5129
                     /locus_tag="RJ266_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OXA-61 family class D beta-lactamase OXA-193"
                     /protein_id="HDV7355409.1"
                     /translation="MKKITLFLLFLNLVFGQDKILNNWFKEYNTSGTFVFYDGKTWAS
                     NDFSRAMETFSPASTFKIFNALIALDSGVIKTKKEIFYHYRGEKVFLSSWAQDMNLSS
                     AIKYSNVLAFKEVARRIGIKTMQEYLNKLHYGNAKISKIDTFWLDNSLKISAKEQAIL
                     LFRLSQNSLPFSQEAMNSVKEMIYLKNMENLELFGKTGFNDEQKIAWIVGFVYLKDEN
                     KYKAFALNLDIDKFEDLYKREKILEKYLDELVKKVKNDG"
     gene            complement(5214..6098)
                     /locus_tag="RJ266_001694"
     CDS             complement(5214..6098)
                     /locus_tag="RJ266_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HDV7355410.1"
                     /translation="MIKIDIKLPINTAKGKKQLELNTCLKANEITAIFGESGAGKTTL
                     LKIIAGLIKPEFGRIEVGDELWFDTQKNVNLAIQKRKIGFVFQDYALFPNMSVKENIF
                     YAATSKQKAEELLSLMNLENLAKIYPKNLSGGQAQRVALARALAREPQILLLDEPLSA
                     LDFKMRSFLQDELVKILQHFKITTLLVSHDLAEIYKLSHRILELSDGKIIKDARINEF
                     FTSSNLSAKLRLSATLLEMKKSDILVIFTLLLNQDIVKITLSEEEFLKSYKDVKIGDT
                     LLLSIKAFNPIIVGKLDK"
     gene            complement(6108..6776)
                     /gene="modB"
                     /locus_tag="RJ266_001695"
     CDS             complement(6108..6776)
                     /gene="modB"
                     /locus_tag="RJ266_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HDV7355411.1"
                     /translation="MDNDFLQTLYLTFKLAFITTFMLFFIGVFLAYLLSFVKFPFKSL
                     VQTFVALPLVLPPSVLGFYLLISFSQNSFLGQFLKEYFNLSLVFSFEGLVFASLIFSL
                     PFMVNPLQSAFSSINQNLLDASYTLGKGKIYTLFRVILPNSKVGIFSACAMSFAHTIG
                     EFGVVMMIGGHKKGETLVASIAIYDELEVLNYTLAHQYAFTLFAISFTILLSLYFVNK
                     KIAL"
     gene            complement(6769..7170)
                     /locus_tag="RJ266_001696"
     CDS             complement(6769..7170)
                     /locus_tag="RJ266_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HDV7355412.1"
                     /translation="MNILNGKIIELLNEGEIVIVKISIKEQIFKVLMLDLHSLQDLKI
                     GTKIQVLFKEHELGFTLPHSILSVENSFLARIKSIKKGKILYHIFFDFEGDEISSIIT
                     KEKALELKLEEGQEWLCFVKENDIILKAVYG"
     gene            complement(7167..7916)
                     /gene="modA"
                     /locus_tag="RJ266_001697"
     CDS             complement(7167..7916)
                     /gene="modA"
                     /locus_tag="RJ266_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV7355413.1"
                     /translation="MKKLVLCFIVLFLSLNLNAQNLSVFVASSASKAMEEVKNEFLKS
                     HPNDNIDLVFGASGKYYQLLKQGREFDLFFSADTKYAQAIYEDQNALDKPKVYVLGIL
                     ALYSLDESLLEGGIEKLKDKANKIHHLSLANPKVAPYGVAAKEVLENLNLDKLFEDKI
                     VLGENISVPVLHVDSNNADLGIVAYSLVSSINHPKGKAILIDQKYFTPLKQSYVITKY
                     AKDKKLAFEFSDFISSQKAKEIFKKYGFDTP"
     gene            complement(7970..8656)
                     /gene="bioC"
                     /locus_tag="RJ266_001698"
     CDS             complement(7970..8656)
                     /gene="bioC"
                     /locus_tag="RJ266_001698"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HDV7355414.1"
                     /translation="MNFLKAKDYQKHAKVQDLMGLKLCEILKNLEISHFKKVFEFGCG
                     RGEFSDKLSKIITFDEYLKNDILDYPDNLNVEIFDMNTLATQNLSKQKFDLITSNASL
                     QWLDLKQVLPTLANMLNKKGILLLSTFGEMNLKEIKQSTSLGLKYFSTKELEQIFKPY
                     FSDIKITEEIVNLEFQNALEVFKHLKLSGVNSLGFYRLNKQFLKEFEEKFQNKLTYHP
                     IFILCKKDTK"
     gene            complement(8653..9264)
                     /locus_tag="RJ266_001699"
     CDS             complement(8653..9264)
                     /locus_tag="RJ266_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HDV7355415.1"
                     /translation="MKYEFLCKNPDSKKLIVVFGGFASHSSHFSHLKSDKNVILFYDY
                     ENFDLNFDFKAFDELFLIAFSMGVCVANRLLKELNFKQKIAINGTNLGIDKSKGIHPA
                     IFRKTLQNFKLENFKEALFKERKNLTKDFIFKDEKALKIELEKLFDFALVKQEENLLW
                     DKVYSSKKDEIFPPNALKNSFKNLIFLDEPHFAFFHFKTWDEI"
     gene            complement(9261..10403)
                     /locus_tag="RJ266_001700"
     CDS             complement(9261..10403)
                     /locus_tag="RJ266_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase
                     family protein"
                     /protein_id="HDV7355416.1"
                     /translation="MKLEKILQDLEQNHNLRTLTPLKHENKFVYKQDHKLLNLVGNDY
                     LYLASSKELKAEFLNTLKEQDLFFSSSSSRSLSGNFEIYEKLESFLKTKFKDKEILHF
                     NSGYHLNISCIAALSSVSKTLFLTDKFIHASMIDGLRLGRADFFRFHHKDMNHLESLI
                     QKHYENYENIIVLSEALFSMDGDFSDFKTLCELKRRYDKIKLYIDEAHSVGCFDEEGL
                     GLVKKLALENEVDFLVFTFGKALASMGACIICDEKYKKFFINKARAFIYSTALPPINV
                     AWTQFIFKKMPYFKKEREKLELLSTFFKSKLQEKNHIVLGDAYIICLLLGENKKALEI
                     SQKLQKAGFFAPAIKEPTVPKNTARIRFSLHAGLNTEELERIIELL"
     gene            10471..11754
                     /locus_tag="RJ266_001701"
     CDS             10471..11754
                     /locus_tag="RJ266_001701"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HDV7355417.1"
                     /translation="MQNQILKNLDLKHIWHPCTQMKDHETLPLIPIKKAKGVWLYDFD
                     DKAYMDCVSSWWVNLFGHCNEKITNAIKKQVDKLEHVILAGFTHEPIIKLSARLCEKV
                     GRNFNKCFYADNGSSAIEVALKMSFHYHLNKGLKKNKFLSLSNSYHGETLGALSVGDV
                     ALYKDTYKALLLECLSTPVPQGKDYTKELEILKDILEKNASEICAFILEPLVQCAGNM
                     HMYEAGFIDEAIKLCHKFGVQVIFDEIAVGFGRTGTLFALHQCKQSPDFICLSKGITG
                     GFMPLSVVLTRDEIYNAFYDTYESQKAFLHSHSYTGNTLACAAANAVLDIFEDENILV
                     KNQILSEFIKKEFSRLEKFDFLGNFRTCGMISAFDILSTKYKRVGLFVFQKALEKGLL
                     LRPLANTIYFMPPYIITKEQIVYVLESLEQIFKEF"
     gene            complement(11741..12346)
                     /locus_tag="RJ266_001702"
     CDS             complement(11741..12346)
                     /locus_tag="RJ266_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HDV7355418.1"
                     /translation="MQIYVSGIHTDVGKTHFSAAFCANFNYDYFKLIQAGTPTDSEFI
                     AKFSPKTKIFKEGIFLQTPASPHLGKIKEKLDYKALDIILPKSKNLLIELAGGLFSPM
                     DENYTMIDFVNIFKHPTILVAKYYLGSINHILLSIEALKQRNINLLALVMMGKKDILQ
                     DDFIKNYAKIPIINLDFFDENSILNKDFKEQMQEILQLKIP"
     gene            complement(12356..12670)
                     /locus_tag="RJ266_001703"
     CDS             complement(12356..12670)
                     /locus_tag="RJ266_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDV7355419.1"
                     /translation="MEWFYLFLATACEIFGVVIMKELVSTKNKLYLLALIVCFGFSFT
                     FLSLSMQNIAMSVAYAIWTGAGTAGGVMIGVLFYKESKSFLKLFLIAVIITCTAGLKF
                     LS"
     gene            complement(12673..13011)
                     /locus_tag="RJ266_001704"
     CDS             complement(12673..13011)
                     /locus_tag="RJ266_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDV7355420.1"
                     /translation="MNEKFNINIAWFLIILGGIIECFWVSGLKYSTEIWQYILTAIGV
                     CISFTCFLKACERLEVSITYSVFVGIGTIGVVLNEMFIFNEAVSIIKLVLIAILLLSI
                     IALKWVSKEA"
     gene            13145..13681
                     /locus_tag="RJ266_001705"
     CDS             13145..13681
                     /locus_tag="RJ266_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HDV7355421.1"
                     /translation="MLEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNE
                     FIKEVRKKTTLIFDVKVGSQTLSVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPV
                     KITGTAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVPAG
                     VTMIDADRVAVVGVEKAR"
     gene            13678..14223
                     /locus_tag="RJ266_001706"
     CDS             13678..14223
                     /locus_tag="RJ266_001706"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDV7355422.1"
                     /translation="MILVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFTNLTNSKFK
                     GELFKIGSSLLLLKPSTYMNNSGLSVKVVNDFYKCERMIVIHDDIDINLGALRFKKGG
                     SSGGHNGLKSIDTLCGNDYERVRIGVGKGENVISHVLGKFKPEEEITLSKVLEHTKKA
                     LLELIENDDLSAISSKYSLKA"
     gene            14225..15283
                     /locus_tag="RJ266_001707"
     CDS             14225..15283
                     /locus_tag="RJ266_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HDV7355423.1"
                     /translation="MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAAN
                     LDLLYVMFLSFSAVPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFL
                     WALFFCCIYIGLNFTSFAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQ
                     NSAQNIKIFNINDLNLSSFVSAKNAHFEGESWILRDGNITLLPKNYELANDGLKIQDF
                     SELKSLEGFKPKIIEGVASNSDYSISDALESFELFKAQNVNTDALKINLYKFVFTPFF
                     APFLMLIMYYFFPVIARFFNLAIVTFIAFVVTLMIWGVLFLLTRLSENSVIASEIGIV
                     VPIIILGCLSAYMYYKHR"
     gene            15327..16535
                     /gene="lysA"
                     /locus_tag="RJ266_001708"
     CDS             15327..16535
                     /gene="lysA"
                     /locus_tag="RJ266_001708"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HDV7355424.1"
                     /translation="MDYKQLKQEFNTPFYIYNFDFIKECFLNLKEAFKARKSQIFYAV
                     KANSNLSLLQMLANLDSGFDCVSIGEVKRALKAGAKAYKIIFSGVGKTKEELRQALEY
                     DILYINLESEAEMMLLESVAKELNLKARISIRVNPNVDAKTHPYISTGLNENKFGVEI
                     DIARKMYLYAKNSSFLEPVGVHFHIGSQLLDISPIHEAAGIVAKLVRELKALQIDLKF
                     FDIGGGLGVAYEKDECESDLYDYAQGILAQLHGLDLTIGMEPGRYLVAKSGEFVCSVL
                     YEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILPYNQGEESLCDVVGGICESGDFFA
                     KARSLPSTQSDDIMVIKNTGAYGFSMSSNYNTRNKVCELALEEGQVRLIRQRENFEDQ
                     IALEEKFLKA"
     gene            16537..17304
                     /locus_tag="RJ266_001709"
     CDS             16537..17304
                     /locus_tag="RJ266_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIA family hydrolase"
                     /protein_id="HDV7355425.1"
                     /translation="MFFLDVQGTLISDHDKSLIHGAKELIDFLNAKNLPYLIITNNTK
                     KLDFLEKLQQKGLAIKENAYIDPFSVLKHLLRPCKVAAFGADEFVKSLENLGFELDFV
                     NPSAVLVASYDDFKFKDFASMIEFARREVRFIAMHETSIYKKDGRPYPGVGSIMAMLK
                     NAIDFEYEVVGKPSIAFYKEALNLIRRQNSKIDFEDIKIISDDFRGDLLKAKELGMKT
                     LLVLSGKISDTKGLDTDLLDGVYPSVFEFLKDLKCQI"
     gene            17292..18365
                     /gene="pheA"
                     /locus_tag="RJ266_001710"
     CDS             17292..18365
                     /gene="pheA"
                     /locus_tag="RJ266_001710"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HDV7355426.1"
                     /translation="MPNLEEFRNKIDAVDDKILDLLNERMTYVKSIGELKQSSGGSIY
                     RPERERAIINRLKNANLGLLDQNAIEAIYQEIFAVSRNLEMPQTIAYLGPEGTYTHQA
                     ARSRFGAMSRYIALANIEDVFKELSNKEAKYGVVPIENNTEGAVGITLDCLGKYNELK
                     IFGEIYMDIHHSFVGINENLKEIKRIYSHPQGYNQCRKFLESHELSAIEFVPSKSTAN
                     AAYLASQDKYAAAICSRIAAKLYNVPVLFDKIEDNAANKTRFLILSDIKNPKMPNCKT
                     SILAHTAHKPGGLSFLLEQFKKENINLTKLESRPVKSKEFLHSFYIDFEGHIDDENVK
                     KALKDIQEIVWLGSYLSGEKDEI"
     gene            18355..19449
                     /locus_tag="RJ266_001711"
     CDS             18355..19449
                     /locus_tag="RJ266_001711"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDV7355427.1"
                     /translation="MKFNEFLNNLSNYEPGKDIEVIAKEYGVKEVIKLASNENPFGTP
                     PKAIECLRQNANKAHLYPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKL
                     NSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCL
                     PNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNV
                     LYLGTFSKLYGLGGLRIGYGIANANIINAFYKLRAPFNVSNLALKAAVAAIDDDEFTE
                     KTLENNFSQMELYKEFAKKHNIKIIDSYTNFITYFFDEKNSTDLSEKLLKKGIIIRNL
                     KSYGLNAIRITIGTSYENEKFFTEFDKILR"
     gene            19501..21183
                     /gene="fliF"
                     /locus_tag="RJ266_001712"
     CDS             19501..21183
                     /gene="fliF"
                     /locus_tag="RJ266_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="HDV7355428.1"
                     /translation="MDFKNMLHQIGQLYQNLTRKQRIVIAASIVVVVGFLVFLALFRG
                     SGSNANNGYAVLVENVSPSSSAAIVAKLEQNNIPYKLESENKILVPQDQVYRQRMFIA
                     SEGLIKDSRVGFEAFDTQAFGATNEEQKVKYQRAIEGELARTIETLEPIRSAVVHIAF
                     PKDSVFTERQIPPTASVVVNVREGLKLTRKQIDGIKNIVSAAVPKLTKENVKISDQSG
                     VPLDEQEAYEDDLVRAQIKFKSDQEKALEDKIIENLAPFAGGMDKVKVSVNIDFDFSK
                     QESQSEIYDPNPIVRSEQTLNEERTGRKDPEIQGVPGAVSNIGPVEGLDNKGQIDTYK
                     KNQVTTNNELSKTITNTKKQFATVLRTSAAVTIDGKYQDVVDENGDVKSEYVPLTKEE
                     LASVESIVKNTINFSATRGDSVVVQNLPFHRESIRVESKVKTFYNRFVEPFIPPVKYF
                     IAAILLFIFYKKVIAPFTQKMLEDVAAQEEMQQGPNAVLDDAEDALEKFNAARKKVEE
                     QLGFGDNFNEDSIQYEVLLEKLRGLVSDKGEEIAALLQNLIQNDSEFGEKDM"
     gene            21183..22211
                     /gene="fliG"
                     /locus_tag="RJ266_001713"
     CDS             21183..22211
                     /gene="fliG"
                     /locus_tag="RJ266_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HDV7355429.1"
                     /translation="MIKLSEEQKMVYDDLSMPEKVAIFLIQLGEDATTSVFSHMEIDV
                     ITEISRYIAMAKNVDRSVATAVLEEFYTLLQSNQYIKSGGLEYAKEILFRTFGPEIAN
                     KILEKLTKSMENNQNFAYLAQIKPQQLADFITKEHPQTIALILAHMDSIHAAETLEYF
                     SDELRAEVVIRMANLGDISPSIIKRVSAVLESKLESLTSYKVEVGGPRAVAEVLNRLG
                     QKASKSTITYIEQSDERLAETIKELMFTFDDIQKLSTQAIREILKVADKRDLMIGLKG
                     ASEELKQKFLANMSTRASEAFLEEMGFLGAVRVKDVEDAQRKVVEVVQKLAEQGLVQT
                     GDADEMIE"
     gene            22219..23049
                     /gene="fliH"
                     /locus_tag="RJ266_001714"
     CDS             22219..23049
                     /gene="fliH"
                     /locus_tag="RJ266_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HDV7355430.1"
                     /translation="MVNRSNVISGGASDQHVVEGYRFKVISEFDNHTGEKKHTQTPDE
                     ENTNISLNDEKPVEENQVIASTQAVMETQIPTFQPSFVEDLLKKTDEMSSNIIKLQMQ
                     IESQENEFNNRLNSELENAKEKFTKEGYEKAKEEFQKELSDFKDKYLKSIAKLDNACE
                     NLENFIEKNEKELADTAIDIAKEVILKELELNSSKIAYALAKDLIGELKGASAIELKV
                     NAEDYEYLKEQFDQNAHIKISLDDAISKGSVVIISDAGNIESNLNSRLTKIKKMVNNE
                     "
     gene            23042..24889
                     /locus_tag="RJ266_001715"
     CDS             23042..24889
                     /locus_tag="RJ266_001715"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HDV7355431.1"
                     /translation="MSKKFAHTQEELEKLSLKELENLAASMREKIIQVVSKNGGHLSS
                     NLGAVELSIAMHLVFDAKKDPFIFDVSHQSYTHKLLSGKEEIFDTLRQINGLSGYTKP
                     SEGDYFVAGHSSTSISLAVGACKAIALKGEKRIPVALIGDGALSAGMAYEALNELGDS
                     KFPCVILLNDNEMSISKPIGAISKYLSQAMATQFYQSFKKRIAKMLDILPDSATYMAK
                     RFEESFKLITPGLLFEELGLEYIGPIDGHNLGEIISALKQAKAMQKPCVIHTQTIKGK
                     GYALAEGKHAKWHGVGAFDIDSGESVKKSDTKKSVTEIFSKNLLDLASKYENIVGVTA
                     AMPSGTGLDKLIEKYPNRFWDVAIAEQHAVTSMAAMAKEGFKPFIAIYSTFLQRAYDQ
                     VIHDCAIMNLNVVFAMDRAGIVGEDGETHQGVFDLSFLAPLPNFTLLAPRDEQMMQNI
                     MEYAYLHQGPIAFRYPRGSFILDKEFNPCEIKLGKAQWLVKNSSEIAFLGYGQGVAKA
                     WQVLRALQEMNNNANLIDLIFAKPLDEELLCELAKKSKIWFIFSENVKIGGIESLINN
                     FLQKYDLHVKVVSFEYEDKFIEHGKTSEVEKNLEKDVNSLLTKVLKFYH"
BASE COUNT         8781 a         3492 c         4246 g         8392 t
ORIGIN      
        1 attaaaaata atacgaaatt tatataattt aaaattaaaa tttttatact atgaagcttt
       61 aaaaaaatat gttaaaatcc aaattttatc ttttgcaagg aaaagcaatg aaagaaattc
      121 ttatcactaa tgacgatggc tatgaaagcg aaggacttaa aaaactcatt aagatgttac
      181 aaaaagaatt taaagccaag attaccatag tagctcctgc tagtgaaaaa tcagcttgtt
      241 cacactccat aaccctaacc aaacctttgc gttttgttaa agtaggaaaa agattttaca
      301 aacttgatga tggcactcca gcagattgtg tttatcttgc acttcacgca ctttataaaa
      361 cacgcttgcc tgatcttgta atcagtggga ttaacaaagg agcaaatgta ggcgaagaca
      421 ttacctactc aggaacttgt gcaggagcta tggaggcggt tttacaagga attccagcca
      481 tagctctttc gcaattttac aaaaaaagtg aaaaagagct tgattttaaa aatgctttaa
      541 aaattactaa aaaaatcgtt caaaatattt ttgataaagg ctttccttta ggaaaaaaag
      601 aatttttaaa cattaatttt ccagcaaaat ccaatataaa aggcattaaa atttgtaaag
      661 caggtaagcg agtgtataat tttgaagcgc attcaaatat caatccacgc ggagtggagt
      721 attattggct tgcagcagcg aatttagact ttgaagatga gaaaaatagc gatattgcct
      781 tacttaaaaa aggctacgct acaataacac ctataatgct ggatcttaca gcttatgaaa
      841 gaatgaaaaa agttaaaaaa tggttaaagg caaaagaatg aatgatagat ttacgcgtat
      901 aaaatggctc gttggagaag aaaaatttca aaaaatttca caaacaaaag ttttggtttg
      961 cggacttggt ggagtgggtg gaatttgcgt tgatgcgctt tatcgtagcg gttttaaaaa
     1021 ccttacttta atcgatgcgg acaaatttga aatcaccaat caaaatcgcc aaattcatag
     1081 cgaaaatata ggcgaagaaa aggctaaagt atttgaaaga atttataagg ctaaaggtat
     1141 agtcagtaaa atcgatgaag attttttaga aaaatttgat ttaagcgagt ttgatcttat
     1201 catagatgcc attgatgata tccctgcaaa agtggctttg gctcatctta tagattttaa
     1261 aaaacaaatt tttatctctt caacaggtgg agctagaaag cttgatccaa cacgcattaa
     1321 aactacaagt atttttaaaa ctcacggcga tgctttagcg aaaaaatttc gttatgaact
     1381 tagaaaatca ggctttaaag gaaattttga tgtggtattt tcagatgagg aagcgcattg
     1441 taaagatctt ggatctttta tgggtgtgac tgcatctttt ggtttagccc tagccagctt
     1501 ggcattaaga aaagttcttg ctaagaaaag ctgatattaa agatttaaat gcttgtttgt
     1561 cgctttttga gcaaagcgta aaaacacttt gtgctaagga ttatacaaaa gatcaaattt
     1621 gtgcttggat taaaattgat agacaacaat gggaagaaaa atttaaatat gatgagatct
     1681 ttgtctatga aaaaagagga aaaataagtg ttaaacaaga gcagaaattg cttgatttgc
     1741 tttttactca tcctgatttt gttagacaag gtttagcaca aaatttactt gattttattt
     1801 taaaaactta tttgcataat gaaatttaca ctttcgcatc cttaagtgct aaagattttt
     1861 tcttaaaaaa tggttttgaa cttataaggg aaaacaaggt tatcaaagag ggacaaaatt
     1921 taaaaaaatt tttaatgaaa aaagatgtgg tttataaaaa ctagaagtta agataagcaa
     1981 aaataatgga ttaaaagata taaaaatcat tttttactta tcttagataa atgaatttat
     2041 ctaagataga aaaaattaca aaaatagcta gatgttagaa aatagctccg tgtttttcat
     2101 aatttgttat ttttgtagca gtgttatttt catccacaaa aacaactttt ggtttaaatg
     2161 tttttgcttc ttcttcatta aaatcagcat aagacatgat gatcacctta tctcccactt
     2221 ctgcaagacg agccgcagca ccatttaagc atacaactcc ttcttcttgc gtggctatgg
     2281 tataggtttc aaatctagcg ccattattga cattgactac ttggactttt tcgtattcta
     2341 aaattccact cgcttgcaat aatttttcat ctatacttat acttcctaca taatcaagcc
     2401 tagcttctgt tacgctcgcg cgatgtattt ttgatttgag taaagtgata ttcattttaa
     2461 tccttgtact aaaaaattat caatgagtct tgtttttcca acaaaagcag ccaccgctcc
     2521 taaaacatta tcagtgatat tttcgatatt ttccatggtg ttaaaatcga ctaattctat
     2581 ataatcgatc ttgattagtt tttctttttc taaaatatct ttcatagctt ggatgatctt
     2641 agaagtattt ttttctccct ctcggactaa tttttcagcc aaaaaaatgc tttgagatat
     2701 agttagtgac gcttttcttt cttctttgct aagatataca tttctagagc ttttagctaa
     2761 gccatcttct tctctaatga taggacaaat ttgaattttt aaatcaaaat ttaaatcatc
     2821 aaccatatgc ctaacgacta cgcattgttg cgcgtctttt tgccccatat agactatatc
     2881 agggtttagg atattaaaaa atttagttaa aaccgtgcaa acgcctctaa aatgccccgg
     2941 tcttttagcc ccgcaaagtt tatcagtgat cgtattcata tctacatagg tgctaaaatt
     3001 cttaagatac atttgagttg catcggggat aaaaaccata tcaacgccat tatcttgaca
     3061 cattttaatg tcgcgttcta aatctcttgg ataactagaa aaatcttcat taggcccaaa
     3121 ttgcatagga tttacaaaga tacttactat aaccttatct tgtgttttgg catgtttgac
     3181 taaacttaaa tgtccatcgt gtaaaaaacc catggttgga acatagccta tactaagttg
     3241 atgtgatttc caatctttta caatttgttt tgcttctttg acagaagtaa tgacttgcat
     3301 atttgtatcc ttagtataat ttatctaata attcatcatc taaataatca aagctgtgct
     3361 cttgggaagg aaaaataccg cttttaactt catctctata tttttcaact cctacttgag
     3421 gatcaatttt atcaaaatgc tttacaaatt ttgctttaaa atctttattt aaacccaaaa
     3481 gatcgtgata aactaaaact tgtccatcgc agtatttgcc tgaacctatg ccgattgttg
     3541 gaatttctaa aatagagctt attttttgtg ctagttttac aggcacacat tctaaaacca
     3601 acatacaagc acccgcatct tgcacagctt ttgcatcatc tataattttt tgggccgatt
     3661 gtaaatcttt accttgaacc ctatagccac ctagcatatt tacagcttgt ggggttaaac
     3721 ctaggtgagc aacgacgggt attcctgatt gggaaatcaa tttaatcttg cttgcgattt
     3781 ctataccccc ttccactttt accccatttg cgtggctttc tttgataaat cttgaggcat
     3841 ttaagatagc gtcacgatct gaactttgat aagacataaa aggcatatca gcaagtacga
     3901 aagacttttt agctccgcga gaaacagctt tggtaaaaat caacatttca tccatagtaa
     3961 cacttaaagt atcttgcata ccaagtaccg tcatggctaa tgaatctcca accaatataa
     4021 tatctatatc gctattgtct aaaattcttg cactatgata atcatacgca cttaccatgg
     4081 ttattttttc atttttggcc tttttttcca aaaaactaat catacttttt ctcattttgc
     4141 atacctcaat ttttagctat aaaataataa gcaaaaaact agcatataat ttttcataaa
     4201 tagtaaatga atgataaagt aagttatatt taatcgatgg attgctttaa tggtcacaat
     4261 tttagaaaat ttcagttcat gttaaaggat atttaaagaa aataaagctt taaaaagtat
     4321 tttgtttaaa attatttaac atagaaagat attttatgaa aaaaataact ttatttttac
     4381 ttttcttaaa tttagtgttt gggcaagata agatattaaa taattggttt aaagagtata
     4441 atacaagcgg cacttttgtt ttttatgatg gaaaaacttg ggcgagtaac gacttttcaa
     4501 gggctatgga gactttctct cccgcttcca cttttaaaat ttttaatgct ttaattgcac
     4561 ttgatagtgg tgtgataaaa actaaaaaag aaatttttta tcactataga ggtgaaaaag
     4621 tatttttatc ttcttgggcg caagatatga atttaagttc agctataaaa tattctaatg
     4681 ttcttgcttt taaagaagtg gcaagaagaa ttggtatcaa aactatgcaa gaatatttaa
     4741 acaagcttca ttatggtaat gctaaaattt ccaagatcga tactttttgg cttgacaact
     4801 cactaaaaat aagcgctaaa gaacaagcaa ttttgctttt tagactttca caaaatagct
     4861 tacctttttc tcaagaagca atgaatagtg ttaaggaaat gatttattta aaaaatatgg
     4921 aaaatttaga gctttttgga aaaacaggtt ttaatgatga gcaaaaaatt gcttggattg
     4981 taggttttgt gtatttaaaa gatgaaaata aatataaggc tttcgcgcta aatttagata
     5041 ttgataaatt tgaagattta tataaaagag aaaaaatttt agaaaaatat ttagatgaac
     5101 ttgtaaaaaa agttaaaaat gatggctagt gagtatttcg taaaatgcaa aaatacttaa
     5161 ttgtatgatt tgcgtacact taaagtactc attaaaaaat taaattttta ctcttattta
     5221 tcaagttttc ctacgatgat agggttaaag gcttttatgg atagcaaaag cgtatcgccg
     5281 atttttacat ctttataaga ttttaaaaat tcctcttcgc taagtgtgat tttaacgata
     5341 tcttgattta aaagcaaagt aaaaataact aaaatatcac tttttttcat ctcaagcaaa
     5401 gtcgcgctca agcgcaattt cgcacttaaa tttgatgagg taaaaaattc atttattctt
     5461 gcatctttga tgatttttcc atcactaagc tctaaaattc tatggctcaa tttgtaaatt
     5521 tcagccaaat cgtgacttac taataaagtc gtgattttaa aatgttgtaa aattttcaca
     5581 agctcatctt gtaaaaaaga tcgcatttta aagtccaatg cactcaaagg ctcatctaaa
     5641 agtaaaattt gtggctctct tgctaaagcc cttgctaaag ccactctttg tgcttgtccg
     5701 ccacttaaat ttttgggata aattttggct aaattttcca aattcattaa gcttaaaagc
     5761 tcttctgctt tttgttttga agtcgcagca taaaaaatgt tttcttttac gctcatattt
     5821 ggaaaaagag cgtaatcttg aaaaacaaag ccgatttttc ttttttgtat ggctaaattg
     5881 acattttttt gggtatcaaa ccaaagctca tctcctactt ctatgcgtcc aaattcaggt
     5941 tttataagtc ctgcaatgat tttaagtaga gttgtttttc ccgcaccgct ttccccaaaa
     6001 atagcagtga tttcatttgc ttttaagcaa gtgtttaatt ctagttgctt cttgcctttt
     6061 gctgtgttga tgggaagttt tatatcgatt tttatcataa aagtggccta tagagcgatt
     6121 tttttattta caaaataaag acttaagagt atggtaaaag aaatcgcaaa taaagtaaaa
     6181 gcgtattgat gtgctaaagt atagtttaaa acttcaagct catcataaat agcaatactt
     6241 gcgaccaaag tttcaccttt tttatgtcca cctatcatca tcaccactcc aaattcaccg
     6301 atagtgtgtg caaaactcat cgcacaagcg ctaaaaatcc ctactttaga attgggcaaa
     6361 attactctaa aaagtgtgta aattttaccc tttcctagag tataagaagc atcaagtagg
     6421 ttttgattga tcgatgaaaa agcgctttgt aaaggattta ccataaaggg tagggaaaaa
     6481 atcaaagaag caaataccaa accttcaaag ctaaaaacca aagaaaggtt aaaatattct
     6541 tttaaaaatt gtcctaaaaa gctgttttgt gaaaagctta tgagcaaata aaaacccaaa
     6601 acacttggag gcaaaaccaa gggcaaagct acaaaggttt gcaccaagct tttaaaagga
     6661 aatttcacaa agcttaaaag ataggctaaa aatactccga tgaaaaagag cataaaggtg
     6721 gtgataaatg caagtttaaa ggtaagataa agggtttgta aaaaatcatt atccataaac
     6781 agcctttaaa atgatatcat tttccttgac aaagcaaagc cattcttgtc cttcttcaag
     6841 tttgagctct aaggcttttt ctttggtgat aatgctagaa atttcatcac cctcaaaatc
     6901 aaaaaagata tgatatagaa ttttgccttt tttgatactt ttaatccttg ctagaaatga
     6961 attttccaca cttaaaatag aatggggtaa agtaaagcca agttcgtgtt ctttgaaaag
     7021 tacttgaatt tttgtaccta ttttaagatc ttgcaaagaa tgaagatcaa gcattaaaac
     7081 tttaaaaatt tgctctttaa tactgatctt aacgatgaca atctcaccct catttaaaag
     7141 ctctataatc ttaccattta agatattcaa ggtgtgtcaa atccgtattt tttaaagatt
     7201 tcttttgctt tttgcgaact gataaaatcg ctaaattcaa aggctaattt tttatcttta
     7261 gcgtattttg tgatgacata gctttgtttt aaaggagtga agtatttttg atcaattaaa
     7321 atagctttgc ctttaggatg attgatagaa gatactagag aataagccac aatacccaaa
     7381 tccgcattat tgctatcgac atgtaaaaca ggcacggaga tattttcacc taaaacaatt
     7441 ttatcttcaa agagtttgtc taaatttaaa ttttcaagca cttctttagc agctactcca
     7501 taaggagcaa cctttggatt tgcaaggctt aggtgatgaa ttttatttgc tttatctttt
     7561 agcttttcta tcccaccttc aagtaagctt tcatctaagc tatatagggc taagatacct
     7621 aaaacataaa cttttggttt atctaaagcg ttttgatcct cataaattgc ttgcgcgtat
     7681 tttgtatcgg ctgaaaaaaa tagatcaaat tcccgccctt gtttcaaaag ttgataatac
     7741 tttcctgaag cgccaaaaac aagatctata ttgtcattag ggtgtgattt taaaaattca
     7801 tttttgacct cttccatagc ttttgaagcc gaagaagcta cgaaaacact taaattttgt
     7861 gcatttaaat ttaaagataa aaacaacact ataaaacata acacgagctt tttcattgca
     7921 ctttcctttg tcgataatct tgattttttg tattataaca taagaaattt tattttgtat
     7981 cttttttgca taaaataaaa ataggatgat aagtgagttt attttgaaat ttttcttcaa
     8041 attcttttaa aaattgcttg tttaagcgat aaaatcccaa agaatttact ccgcttaatt
     8101 ttaaatgttt aaaaacttct aaagcgtttt gaaattccaa atttacaatt tcttctgtga
     8161 ttttaatatc ggaaaaatag ggtttgaaaa tttgttcaag ttcttttgtg ctaaaatatt
     8221 ttaaacccaa gcttgtgctt tgtttgatct cttttaaatt catttctcca aaagtagaaa
     8281 gaagtaaaat tcctttttta tttagcatat ttgctagcgt gggcaaaacc tgctttaaat
     8341 caagccattg caaacttgca ttagaagtga taagatcaaa tttttgcttg cttaaattct
     8401 gtgtagctag ggtattcata tcaaaaattt ctacattaag attatcagga taatccaaaa
     8461 tatcattttt taaatattca tcaaaagtga taatttttga aagtttgtcg ctaaattcgc
     8521 ccctgccaca accaaattca aacacttttt taaaatgcga aatttctaaa ttttttaaaa
     8581 tttcacaaag ttttaagccc attaaatctt gcacttttgc gtgtttttga taatcttttg
     8641 cttttaaaaa attcaaattt catcccaagt tttaaaatga aaaaaagcaa aatgcggttc
     8701 atctaaaaaa atcaaatttt taaaactatt tttcaaggca tttggtggaa aaatttcatc
     8761 ttttttactt gaataaacct tatcccaaag caaattttct tcttgtttta ctaaagcaaa
     8821 gtcaaaaagt ttttcaagct ctatttttaa agctttttca tctttaaaaa taaaatcttt
     8881 agttaaattt ttgcgttctt taaataaagc ttctttgaaa ttttctaatt tgaaattttg
     8941 caaggttttt ctaaaaattg caggatgaat tccttttgat ttatctatgc ctaaatttgt
     9001 gccatttatg gctatttttt gtttaaaatt aagctctttt aaaagtctat ttgccacaca
     9061 aacccccata gaaaaagcga ttaaaaaaag ttcatcaaaa gctttgaaat caaaatttaa
     9121 atcaaaattt tcataatcat aaaataaaat cacattttta tcgcttttta aatgcgaaaa
     9181 atgactagaa tgtgaagcaa atcccccaaa taccactata agtttttttg aatcaggatt
     9241 tttacataaa aattcatatt tcataaaagc tctattatcc tttcaagttc ttctgtgtta
     9301 agtcctgcgt gcaaagaaaa acgaattctg gctgtatttt ttggcacggt aggttctttg
     9361 atcgcaggag caaaaaaacc agctttttga agtttttgtg aaatttctaa ggctttttta
     9421 ttttcaccta aaagtaagca aatgatataa gcatcgccta aaacgatgtg atttttttct
     9481 tgcaatttac ttttaaaaaa agtgcttaaa agctctaatt tttctctttc tttcttaaaa
     9541 taaggcattt ttttaaaaat aaattgcgtc caagctacat taataggtgg caaggctgta
     9601 gaataaataa aagctctagc cttgttgatg aaaaatttct tatatttttc atcacatatt
     9661 atacaagcac ccatggaagc aagggctttt ccaaaggtaa aaaccaaaaa atccacttca
     9721 ttttctaagg ctagtttttt aacaagcccc aaaccctctt catcaaaaca acccacgctg
     9781 tgtgcttcat ctatataaag cttaatttta tcataacgcc ttttaagctc acacagagtt
     9841 ttaaaatcgc taaaatctcc atccatacta aacaaagctt cgcttaaaac gatgatattt
     9901 tcataatttt cataatgttt ttggattaaa ctctctaaat gattcatatc tttatgatga
     9961 aaacgaaaaa aatcagccct gccaagtctt aagccatcaa tcatacttgc atgaataaat
    10021 ttatcggtta gaaaaagcgt cttagaaacg ctagaaagtg ctgctataca agagatattt
    10081 agatgatagc cactattaaa atgtaaaatt tccttatctt taaatttagt ctttaaaaaa
    10141 ctttctaatt tttcataaat ttcaaaattt ccactcaaac ttcttgaact cgaacttgaa
    10201 aaaaacaaat cttgttcttt tagggtgttt aaaaactcag cttttaactc tttggaagac
    10261 gccaaataaa gataatcatt tcctactaaa tttaaaagtt tgtgatcttg cttataaaca
    10321 aatttatttt catgttttaa aggtgttaga gttcttagat tgtgattttg ctctagatct
    10381 tgcaaaattt tttcaagctt catttttttc ctgtaaattt aaaaatttaa agtattattt
    10441 tgccaaaata tttttaaaaa agaagttata atgcaaaatc aaatcttaaa aaatctcgat
    10501 ttaaaacaca tttggcaccc ttgcacacaa atgaaagatc acgaaaccct acctttaatt
    10561 cctataaaaa aagcaaaagg tgtatggctt tatgattttg atgataaagc ttatatggat
    10621 tgtgtgagtt cttggtgggt caatcttttt ggtcattgta atgaaaaaat cacaaatgcc
    10681 attaaaaaac aagttgataa gctagagcat gtgatcttag caggctttac acatgagccc
    10741 atcatcaagc tttctgcaag actttgcgaa aaagtaggca ggaattttaa taaatgtttt
    10801 tatgcagata atggctcaag tgccattgaa gtagcactta agatgagttt tcattatcat
    10861 ttaaataaag gtttgaaaaa aaataaattt ttatccctaa gcaattccta tcatggcgaa
    10921 accttaggag ccttaagtgt gggcgatgta gcgctttata aagatactta caaagccttg
    10981 cttttagagt gtttaagcac gcctgtgcca caaggcaaag actacactaa agagcttgaa
    11041 attttaaaag atattttaga aaaaaatgca agtgaaattt gtgcttttat acttgaaccc
    11101 ttggtgcaat gtgcaggaaa tatgcatatg tatgaagcag ggtttattga tgaggccata
    11161 aagctttgcc ataaatttgg agtgcaagtg atttttgatg aaattgcagt gggctttgga
    11221 cgcacaggaa ctttgtttgc cttacatcaa tgcaaacaaa gccccgattt tatctgcctt
    11281 tcaaaaggga taacgggtgg atttatgcca ctttctgtag tgcttacaag agatgaaatt
    11341 tataatgctt tttatgatac ttatgaaagc caaaaggctt ttttacattc tcatagctat
    11401 acgggaaata ccttagcttg cgcggcagca aatgcggttt tagatatctt tgaggatgaa
    11461 aatattttag taaaaaatca aattttaagc gagtttatca aaaaagaatt ttcaagactt
    11521 gaaaaatttg actttttggg taattttaga acttgcggga tgatcagtgc ttttgatatt
    11581 ttaagcacca agtataaacg cgtaggactt tttgtatttc aaaaagcctt agaaaaaggt
    11641 ttgcttttaa gacctttagc aaatacgatt tattttatgc ctccttacat catcacaaaa
    11701 gaacaaatcg tttatgtact agagagttta gagcagattt ttaaggaatt ttaagttgta
    11761 aaatttcttg catttgctct ttaaaatctt tatttaaaat gctattttca tcaaaaaaat
    11821 caagattgat tataggaatt tttgcataat tttttataaa atcatcttgt aagatatctt
    11881 ttttacccat cattacaagg gctaaaagat tgatatttct ttgctttaaa gcttcaatgc
    11941 taagcaagat atgattaatg cttccaagat agtattttgc taccaaaatc gtagggtgtt
    12001 tgaaaatatt cacaaaatca atcatagtgt aattttcatc cataggagaa aaaagcccac
    12061 ccgcaagctc aataagtagg tttttgcttt ttggtaaaat gatatctaag gctttataat
    12121 caagcttttc tttgattttt ccaagatgag gagaagctgg agtttgcaaa aaaatacctt
    12181 ctttaaaaat ctttgttttt gggctaaatt ttgcaataaa ctcgctatct gttggagttc
    12241 ctgcttgaat gagtttaaaa taatcatagt taaaattcgc acaaaaagct gcgctaaaat
    12301 gtgtttttcc tacatcagta tgtattccac ttacataaat ttgcacaaaa aatcctcaag
    12361 aaagaaattt taaacccgct gtacaagtaa taatcacagc gattaaaaaa agtttcaaaa
    12421 aacttttact ttctttataa aaaagcactc ctatcattac cccaccagcg gttccagctc
    12481 ctgtccatat agcataagca acgctcatag cgatattttg catacttaag cttaaaaaag
    12541 taaaagaaaa tccaaaacac actatcaaag ctaaaaggta aagcttgttt ttagtgctta
    12601 caagttcttt catgatcacc acgccaaaaa tttcacaggc agtagctaaa aacaaataaa
    12661 accattccat aactaagctt ccttgcttac ccatttaagg gctataatac ttaaaagtaa
    12721 aattgctata agcacaagtt taattataga aacagcttcg ttaaaaataa acatttcatt
    12781 taaaaccacc ccaatagtgc caatgcctac aaaaacacta taagtaatac ttacttcaag
    12841 tctttcacaa gcttttaaaa agcaagtaaa agaaatacaa accccaatgg ctgttaaaat
    12901 atactgccaa atttctgtag aatatttaag tccacttacc caaaagcatt ctataatccc
    12961 acctaagatt attaaaaacc aagctatatt aatattgaat ttttcattca catgaagcct
    13021 taaattaaca taatatttgt aaaacaaatt atatcttaaa gaaattaaaa gaagctataa
    13081 atttactttt ccataagcca aaattagata taatcaaagc tcatttttta agaaaggata
    13141 aaagatgtta gaaggtatcg ttagagagag tatcggtaga aaagctgcta aagctttaaa
    13201 aagagatggt tatctaatcg caaacatcta tggaaaagga ttagaaaaca tcaatgccgc
    13261 ttttaaagta aatgagttta ttaaggaagt tcgtaaaaaa actactttaa tttttgatgt
    13321 aaaagtaggt tctcaaactt taagcgttgt agttgtggat tatcaaaaag atcctgtaac
    13381 tgcagaactt aaacatgtgg atttaaaagt tgcacaaaaa ggtgtgattt ctaaatacat
    13441 ggttccagtt aaaatcacag gaacagctat aggtcttaaa aataaaggtg ttttaatcca
    13501 atcaaaaaga agattaaaag taaaatgtgc agctgaaaat ttaccaaatt tcttcgaact
    13561 tgatgtaagt aaacttgatg tgggtgatgc tttacttgtt cgtgatattg tagttcctgc
    13621 gggagtaact atgattgatg ctgatagagt agcggttgta ggtgtagaaa aagctagatg
    13681 attttagtcg tagggcttgg caatataggc gtagagtatg aaaatacccg tcataatgtc
    13741 ggttttatgc taattgactt gcttttaaaa gaaagcaatt ttacaaatct tacaaactct
    13801 aaatttaaag gagaactttt taaaataggt tcttctttgc ttcttcttaa acctagcact
    13861 tatatgaata attcaggact tagtgtaaaa gtagtgaatg atttttataa atgcgaaaga
    13921 atgatagtta tccatgatga tatagatata aatttaggag ccttgcgctt taaaaaaggc
    13981 ggttcaagtg gtggacataa tgggcttaaa agcatagata ctttatgtgg aaatgattat
    14041 gaaagagtgc gtataggagt gggaaagggt gaaaatgtga tttcccatgt tttaggtaaa
    14101 tttaaacccg aagaagaaat aaccttaagc aaagttttag agcatacaaa aaaagctttg
    14161 cttgagctta ttgaaaatga tgatttgtct gctatatcat ctaaatacag cctaaaggct
    14221 taagatgtgg atattttttc gttttatttc agggatttat ttaaaaaatt tttttattat
    14281 atttttttct ttacttggtt tttattgcgg tattgatttg ctcttaaatt ttaaagatct
    14341 accaaaagcc gcaaatcttg atttgcttta tgttatgttt ttatctttct cggcagtgcc
    14401 ttatgtatta cccatttctt tgatttttgc cttggtagtt tctttgattt ccatgatcag
    14461 agcaaatgaa tttgtaagtc tttatgcgtt aggactgagc agaaattatg ttattttatt
    14521 tcctttttta tgggctttat ttttttgttg tatttatata ggattgaatt ttacttcttt
    14581 tgcttatgca aatgattata agagaaatat tttaaaaaat ggtactatta tgaatcaaag
    14641 tggagaagtg tttttgaaat ttaacaataa ttttgtttat atttcaaaga taaacaatgg
    14701 acaaaatagt gctcaaaata taaaaatttt taatattaat gatttaaatt taagctcttt
    14761 tgtaagtgct aaaaatgccc attttgaagg tgaaagttgg attttgcgag atggcaatat
    14821 tacattatta cctaaaaatt atgaacttgc taatgatggt ttaaagatac aagatttctc
    14881 cgagcttaaa tcacttgagg gttttaaacc aaagattata gaaggggttg ctagtaatag
    14941 tgattattca atatctgacg cacttgaaag ttttgagctt tttaaggcac aaaatgtcaa
    15001 tacagatgct cttaaaatca atctttataa atttgttttt actccttttt ttgcaccatt
    15061 tttaatgctt attatgtatt atttttttcc tgtaatagca agatttttta atcttgctat
    15121 tgtaactttt atagcttttg tagtgacttt gatgatttgg ggagtcttgt ttttgcttac
    15181 tagattaagc gaaaatagtg tgattgcaag tgaaattggc attgtagtgc ctattataat
    15241 tttgggttgt ttaagtgctt atatgtatta taagcatcga taaattaagc tttatgtagt
    15301 aaaattataa aaattaaagg ttaaatatgg attataaaca attaaagcaa gaatttaata
    15361 ctccttttta tatttacaat tttgatttca taaaagagtg ttttttaaat ctcaaagagg
    15421 cttttaaggc tagaaaatct caaatttttt acgctgtaaa agccaattca aatttaagtt
    15481 tgttgcaaat gcttgcaaat ttagatagtg gatttgattg tgtaagtata ggcgaggtaa
    15541 agcgtgcctt aaaagcagga gcaaaagctt ataagattat ttttagtgga gtaggaaaaa
    15601 ccaaagaaga gttaagacaa gctttagaat atgatatttt atatattaac cttgaaagcg
    15661 aagctgaaat gatgctttta gaaagtgtgg ctaaagaact taatctaaag gcaagaatca
    15721 gtattcgtgt taatccaaat gttgatgcaa aaactcatcc ttatatttct acaggattaa
    15781 atgaaaataa atttggtgtc gaaattgata tagcaagaaa aatgtatctt tatgcaaaaa
    15841 attcatcttt tttagagccc gttggagtgc attttcatat aggttcgcaa cttttagata
    15901 tttctcccat tcatgaagca gcaggcatcg ttgcaaaact tgtaagagag ttaaaagcct
    15961 tgcaaatcga tcttaaattt tttgatatag gcggtggttt gggtgtggct tatgaaaaag
    16021 atgagtgtga atctgatctt tatgattatg cacaaggtat attagcacaa cttcatgggc
    16081 ttgatttaac tataggaatg gagcctggaa ggtatctagt tgctaaaagt ggagaatttg
    16141 tttgttcagt gctttatgaa aaacaaaata aaaccaagcg ttttgttgta gtagatggag
    16201 cgatgaatga tcttatacgc ccaagtttat acgaggctta tcatgaaata atcttacctt
    16261 ataatcaagg cgaagagagt ttatgtgatg ttgtaggtgg aatttgtgag agtggggact
    16321 tttttgctaa agcaaggtct ttgcctagca ctcaaagtga tgatataatg gttattaaaa
    16381 atactggagc ttatggtttt agcatgagta gtaattacaa tactcgtaat aaagtttgcg
    16441 aattagccct tgaagaagga caggtaagat tgatccgtca aagagaaaat tttgaagatc
    16501 aaatcgcttt agaagagaaa tttttaaagg cttaaaatgt tttttttaga tgttcaaggg
    16561 actttaattt ctgatcatga caagagttta atccatggtg ctaaagaatt gatcgatttt
    16621 ttaaatgcaa aaaatcttcc ttatcttatc attactaaca atacaaaaaa acttgatttt
    16681 ttagaaaaat tacagcaaaa aggattggct ataaaagaaa atgcttatat tgatcctttt
    16741 agcgttttaa aacacctttt aagaccttgt aaagttgcgg cttttggtgc agatgagttt
    16801 gtaaaaagtc ttgaaaatct tggttttgaa ctcgattttg taaatcctag cgctgtactt
    16861 gtagctagtt atgatgattt taaatttaaa gattttgcta gtatgataga atttgctaga
    16921 agagaagtta gatttatagc tatgcacgaa actagtattt ataaaaaaga tggtaggcct
    16981 tatcctggtg taggtagcat tatggctatg cttaaaaatg ctattgattt tgaatacgag
    17041 gttgtgggta agcctagcat tgctttttat aaagaagctt taaatttaat aagaagacaa
    17101 aattcaaaaa tcgattttga agatattaaa atcattagtg atgattttag gggtgacttg
    17161 cttaaggcaa aagaacttgg catgaaaacc ttgctagttt taagcggcaa gataagcgac
    17221 acaaaagggc ttgatacgga tttgcttgat ggagtttatc ctagtgtttt tgagttttta
    17281 aaggatctaa aatgccaaat ttagaagaat ttagaaataa aatcgatgcg gttgatgata
    17341 aaattttaga tcttttaaat gaaagaatga cttatgttaa aagtataggt gagcttaagc
    17401 aaagtagtgg gggaagtatt tatcgtcctg agcgtgaaag agccattatc aatcgtttaa
    17461 aaaatgcaaa tttaggactt ttagatcaaa atgccataga ggcaatttat caagaaattt
    17521 ttgcagtttc aagaaattta gaaatgcctc aaactatagc ttatttaggg cctgaaggaa
    17581 cttatacaca tcaagcagca agaagtcgtt ttggtgcgat gagtcgttat atagccttgg
    17641 ctaatatcga agatgttttt aaagagttaa gcaacaaaga agcaaaatat ggtgttgtac
    17701 ctatagaaaa taataccgaa ggtgcagtgg gcattacttt agattgtcta ggtaagtata
    17761 atgagcttaa aatttttggc gaaatttata tggatattca tcattctttt gtaggaatta
    17821 atgaaaattt aaaagaaatc aaacgcattt attcgcatcc gcaaggttat aatcaatgtc
    17881 gtaaattttt agaaagtcat gaacttagtg ctatagaatt tgttccttca aaatctacag
    17941 ctaatgcagc ttacctagct tcgcaagata aatatgcggc agcaatttgt tctagaatag
    18001 cggctaagct ttataatgtg cctgtacttt ttgataaaat agaagataat gcagccaata
    18061 aaacaagatt tttaatttta agcgatatta aaaatcctaa aatgccaaat tgtaaaactt
    18121 ctattttagc acacacagca cataaacctg ggggacttag ctttttatta gagcagttta
    18181 aaaaagaaaa tatcaatctt actaagcttg aatctcgccc tgtaaaatca aaagaatttt
    18241 tacacagttt ttatatagat tttgaagggc atattgatga tgaaaatgta aaaaaagcct
    18301 taaaagatat acaagagatt gtttggcttg gatcttattt atcaggagaa aaagatgaaa
    18361 tttaatgaat ttttaaataa tttaagcaat tatgaacccg gcaaagatat agaagttatt
    18421 gctaaagaat atggcgttaa agaagtgata aaattagcaa gcaatgaaaa tccttttggc
    18481 acgccaccaa aagctataga atgtttaaga caaaatgcaa acaaagccca tctttaccct
    18541 gatgatagta tgatagaact taaaagcaca ttggctcaaa aatacaaagt tcaaaatgaa
    18601 aatatcatta tcggtgcagg cagtgatcaa gtgattgaat ttgctataca ttctaagtta
    18661 aattctaaaa atgctttttt gcaagctgga gttacttttg ctatgtatga aatttatgcc
    18721 aaacaatgtg gtgcaaagtg ttataaaact caaagtatta ctcataattt agatgagttt
    18781 aaaaaacttt atgaaacgca caaagatgaa attaaactta tttttttatg cttaccaaac
    18841 aatcctttag gcgagtgttt ggatgcaagt gaggcgaccg agtttattaa aggtgtaaat
    18901 gaggattgtt tagttgtgat tgatgcagct tataatgaat ttgcaagttt taaagatagc
    18961 aaaaaacatt tagaaccttg tgaattgatt aaagaatttg acaatgtact ttatttggga
    19021 actttttcta aactttatgg attaggaggc ttacgcattg gttatggtat agctaatgct
    19081 aatattatta atgcatttta taagcttcgt gctcctttta atgtgagcaa tcttgcttta
    19141 aaagcagcag ttgcagcaat agatgatgat gaatttactg aaaaaacttt agagaataat
    19201 ttttctcaaa tggagcttta taaagaattt gctaaaaaac ataatatcaa aattatcgat
    19261 agttatacaa atttcatcac ttattttttt gatgaaaaaa atagtacaga tttgtctgaa
    19321 aaattgctta aaaagggtat aataataaga aatttaaaaa gctatggttt aaatgctata
    19381 cgcattacta taggaacatc ttatgaaaat gaaaaatttt ttacagaatt tgataagatt
    19441 ttaagataga taaatcaaat aaaaatatgt aaaattcgct aaactaaggg atgagaatta
    19501 atggatttta aaaatatgct tcatcaaatt gggcaacttt atcaaaattt aactcgcaag
    19561 cagcgtatag tgattgctgc atctattgta gtagtggttg ggtttttggt ttttttagct
    19621 ttatttcgtg gaagtggtag taatgcaaat aatggatatg cagttttagt tgaaaatgta
    19681 agcccaagtt cttctgctgc aattgtagct aaacttgaac aaaataatat tccctataaa
    19741 ttagaaagtg aaaataaaat tttagttcca caagatcagg tttatcgtca aagaatgttt
    19801 attgcaagcg aaggtcttat aaaagatagt cgcgtgggtt ttgaagcttt tgatactcaa
    19861 gcttttggag ctacaaatga agagcaaaag gtaaaatacc aaagagccat agaaggcgaa
    19921 cttgcaagaa ctattgagac tttagaacct attcgtagtg ctgttgtaca catagcattt
    19981 cctaaagata gtgtttttac cgaaaggcaa attccgccta cagcttcagt tgttgttaat
    20041 gttcgcgaag gcttaaagct tactagaaaa caaattgatg gtataaaaaa tattgtttcg
    20101 gcggcagttc caaaacttac taaagaaaat gttaagatta gtgatcaaag tggtgtgcct
    20161 ttagatgagc aagaagcata tgaagatgac ttggttcgtg cgcaaattaa atttaaaagt
    20221 gatcaagaaa aagctttaga agataagatt atagaaaatt tagctccttt tgcaggtggc
    20281 atggataaag taaaagtgag tgtaaatata gattttgatt tttccaagca agaatctcaa
    20341 agtgaaattt atgatccaaa tcctatagta cgtagtgagc aaactttaaa cgaggaaaga
    20401 acaggtagaa aagatccaga aattcagggt gttccaggtg ctgtttctaa tataggtcct
    20461 gttgaaggac ttgacaataa gggtcaaatt gacacttata aaaaaaatca agttactaca
    20521 aataatgaac tttctaaaac tatcacaaat accaaaaaac aatttgcaac agttttacgc
    20581 acttcagcag ctgttactat agatggaaaa tatcaagatg tggttgatga aaatggggat
    20641 gtgaaaagcg aatatgtccc attgactaaa gaagagcttg caagtgttga gagtatagtt
    20701 aaaaatacta ttaattttag cgctactaga ggtgatagtg ttgtggtgca aaatttacca
    20761 tttcatcgtg agtcgattag agttgagagt aaagttaaaa ctttttacaa tcgttttgtt
    20821 gagccattta ttccgccggt taaatacttt attgcagcga ttttactttt tattttttac
    20881 aaaaaagtta ttgctccatt tactcaaaaa atgcttgaag atgtcgcagc acaagaggaa
    20941 atgcagcaag gtccaaatgc tgttttagat gatgctgaag atgctttaga gaaatttaat
    21001 gcagcaagga aaaaagttga agaacaactt ggttttgggg ataacttcaa tgaagattct
    21061 atccagtatg aggttttgct tgaaaaattg cgtggtttgg taagtgataa aggtgaggaa
    21121 attgcagcac ttttgcaaaa cttaattcaa aatgatagcg aatttggcga aaaggatatg
    21181 tgatgataaa gctaagtgaa gaacaaaaaa tggtctatga tgatttatcg atgcctgaga
    21241 aggtagcgat atttcttata caacttggcg aagatgcaac cacttctgtg ttttcacata
    21301 tggaaattga tgtaatcaca gaaatttcac gttatattgc tatggctaaa aatgttgata
    21361 gatctgtagc tactgcagtt ttagaagaat tttacactct gcttcaatca aatcaatata
    21421 ttaaaagtgg tggtttggaa tatgctaaag aaatactttt tcgtactttt ggaccagaga
    21481 ttgcaaataa aattcttgaa aaactcacta aaagtatgga gaataatcaa aattttgctt
    21541 atttggcgca aattaaacca cagcaacttg cagactttat taccaaagag cacccacaaa
    21601 ccatcgctct tattttggca cacatggatt ctattcatgc ggcagaaact ttagagtatt
    21661 ttagcgatga attaagggct gaggtggtta taagaatggc aaatcttggt gatatttctc
    21721 caagtattat taaaagagtt tctgcagtgc tagaaagcaa gcttgaaagt cttacctctt
    21781 ataaggttga agtgggcggc ccaagagcag tagcagaagt gcttaatcgt ttgggtcaaa
    21841 aagcaagcaa atcaaccatt acttatattg aacaaagtga tgaacgctta gcagagacta
    21901 ttaaagagct tatgtttact ttcgatgata tacaaaaact tagcactcag gctataagag
    21961 aaattttaaa agtagccgat aagcgtgatt taatgatagg tttaaaaggt gcaagtgaag
    22021 agttaaagca aaaattctta gccaatatgt ctacgcgtgc aagcgaagct tttcttgaag
    22081 aaatgggttt tttgggtgct gtgcgtgtta aagatgttga agatgcacaa agaaaggttg
    22141 ttgaagtggt gcaaaaactt gcagaacaag gtcttgttca aacaggcgat gcggatgaaa
    22201 tgatagagta ggtgagagat ggttaatcgt agcaatgtaa tttctggtgg ggcttctgat
    22261 cagcatgttg ttgaaggata tcgttttaaa gttatttcag aatttgataa tcatacaggt
    22321 gaaaaaaaac atactcaaac tccagatgaa gaaaatacta atatatcttt aaatgacgaa
    22381 aaaccagtcg aagaaaatca agtcattgcc tctacacaag ctgttatgga aactcaaatt
    22441 ccaacatttc aaccaagctt tgttgaagat ttacttaaaa aaacagatga aatgtcaagc
    22501 aatattatta aacttcaaat gcaaatagaa agccaagaga atgaatttaa taaccgctta
    22561 aattcagaac ttgaaaatgc taaagaaaaa tttaccaaag agggttatga gaaagcaaaa
    22621 gaagaatttc aaaaggaatt gagtgatttt aaagataagt atttaaaaag tatagccaaa
    22681 cttgataatg cttgcgaaaa tcttgaaaat ttcatagaaa aaaatgagaa agaattagca
    22741 gatactgcta tagatatcgc taaagaagta atcttaaaag aacttgaact aaattcaagt
    22801 aagatagctt atgctttggc taaagattta atcggtgagc ttaagggtgc tagtgcaatt
    22861 gagcttaagg ttaatgcaga ggattatgag tatttaaaag agcaatttga tcagaatgct
    22921 catattaaaa taagtcttga tgatgcaatt agcaaaggaa gtgttgttat tataagtgac
    22981 gcaggcaata tagaatccaa tcttaactct cgtctaacta aaattaaaaa aatggtgaat
    23041 aatgagtaaa aaatttgccc atactcaaga agagttagaa aagctaagtt taaaagaatt
    23101 agaaaattta gcagcatcta tgcgtgaaaa aatcatacaa gttgtgagta aaaatggtgg
    23161 gcatttaagt tcaaatttgg gtgctgtaga acttagtata gcaatgcatt tggtttttga
    23221 tgcaaaaaaa gatcctttta tttttgatgt gtcgcatcag tcttatacac acaagctttt
    23281 aagcggaaaa gaagaaatat ttgatacttt aagacaaatc aatggtttaa gtggttatac
    23341 aaaacctagc gagggagatt attttgtagc agggcattct agtacctcta tttctttggc
    23401 agtaggtgct tgtaaggcta ttgctttaaa gggtgaaaag cgtattcctg ttgctttgat
    23461 tggagatggt gctttaagtg cgggtatggc ctatgaggct ttaaatgaat tgggtgattc
    23521 taaatttcct tgcgtaatac ttttaaatga taatgaaatg agtatttcaa aaccaattgg
    23581 agcaatttca aagtatcttt ctcaggctat ggcaacgcag ttttatcaaa gttttaaaaa
    23641 gcgtattgct aaaatgttgg atatattgcc tgatagtgct acttatatgg ccaagcgttt
    23701 tgaagagagt tttaaactta ttactcctgg acttttgttt gaagaattag ggcttgaata
    23761 tatagggcct attgatggac ataatttagg tgaaattatt tctgcattaa aacaagcaaa
    23821 agctatgcaa aagccttgtg tgatacatac tcaaaccata aagggtaaag gctatgcttt
    23881 agccgaagga aaacatgcta aatggcacgg ggtgggagct tttgatatag atagtggaga
    23941 gagtgttaaa aaaagtgata ctaaaaaatc tgttactgaa attttttcta agaatttgct
    24001 tgatttagcc tcaaaatatg aaaatattgt tggggttacg gcggctatgc caagtggaac
    24061 aggtcttgat aagcttatag aaaaatatcc aaatcgtttt tgggatgtgg ctattgcaga
    24121 acagcatgca gtaacttcta tggccgctat ggcaaaagaa ggatttaaac cttttattgc
    24181 aatatatagc acttttttgc agcgtgctta tgatcaagtg atccatgatt gtgcgattat
    24241 gaatttaaat gtggtttttg ctatggatag ggcagggata gtaggcgaag atggggagac
    24301 gcatcaaggt gtttttgatc ttagtttttt agctcctttg ccaaatttca ctcttttagc
    24361 cccaagagat gaacaaatga tgcaaaatat aatggagtat gcttatttac atcaaggacc
    24421 tattgctttt cgttatccta gagggagttt tattttggat aaagaattta atccttgtga
    24481 gataaaactt ggtaaggcgc aatggcttgt aaaaaatagt agtgaaattg cttttttagg
    24541 ttatggacaa ggtgtggcaa aagcgtggca agtcttaaga gccttgcaag aaatgaataa
    24601 taatgctaat ttgattgatt taatttttgc taaaccttta gatgaagagc ttttgtgtga
    24661 gcttgctaaa aaaagtaaaa tttggtttat ttttagtgaa aatgttaaaa ttggcggtat
    24721 agaaagttta attaataatt ttttacaaaa atatgatttg catgtaaaag ttgttagctt
    24781 tgaatatgaa gacaaattta ttgaacatgg aaaaacaagt gaggtggaaa aaaatttaga
    24841 aaaagatgtc aatagtttgt tgacgaaagt tttaaaattt tatcattaaa taataaaaaa
    24901 tattatttaa t
//
LOCUS       DAPIWB010000150         1449 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_1096
            SAMN06270774-rid18266393.guided.119, whole genome shotgun sequence.
ACCESSION   DAPIWB010000150 DAPIWB010000000
VERSION     DAPIWB010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270774
            Sequence Read Archive: SRR5209591
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1449)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1449)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768278.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768278.1
            Genome Coverage       :: 345x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 22:50:20
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,717
            CDSs (total)                      :: 1,679
            Genes (coding)                    :: 1,636
            CDSs (with protein)               :: 1,636
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 31 of 43
            Pseudo Genes (incomplete)         :: 9 of 43
            Pseudo Genes (internal stop)      :: 12 of 43
            Pseudo Genes (multiple problems)  :: 8 of 43
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1449
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270774-rid18266393.guided.119"
                     /isolate="CI_1096"
                     /isolation_source="Cattle feces"
                     /host="Bos taurus"
                     /db_xref="taxon:197"
                     /country="Canada: Lethbridge, Alberta"
                     /lat_lon="49.6934 N 112.8418 W"
                     /collection_date="2005-07-20"
                     /collected_by="NML@Lethbridge"
     gene            1..828
                     /locus_tag="RJ266_001716"
                     /pseudo
     CDS             1..828
                     /locus_tag="RJ266_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002814927.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="aminoglycoside 6-adenylyltransferase"
     gene            complement(990..>1449)
                     /locus_tag="RJ266_001717"
     CDS             complement(990..>1449)
                     /locus_tag="RJ266_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002928144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7355432.1"
                     /translation="IYIAIAIISVFIIIKSQEINYCYLGFGCFIIFIFFSLQLCFKDF
                     KSFKFFALINTIILFLSIIFLNENITSYLKIGNFKAEEMTLSKNKIVKNKLLDNNISF
                     IENEEGLKVKDLYILSDAKDVYYVQSKKEENKKLKKSFLIDKKYVLDKDF"
BASE COUNT          600 a          157 c          144 g          548 t
ORIGIN      
        1 ataaacaaat tcgtcttata acacttgaag gttcaagagt aaataagaaa gctaaaaagg
       61 ataaatatca agattatgat atttcatttt ttctaaaatc taaaaatttg agaaaattat
      121 taaacctaaa caaaagcaaa gatattaaaa aaagcaaaat tacctaaatt tattaaaaat
      181 tttggaaaaa ttttatttta tcaagcgcct gaaagctttg aattctataa agctgattta
      241 cctaaaaatt gggtgagttt tttggtaatt tttaaaaatg gagtgagagt agactttaaa
      301 tttatcccct taaaatcatt gaaacattat tataaatttg aacctttaag caaagtgctt
      361 atagataaag atcaaagatt taaaaaaact caaagtgaga atgttttttg cattaagaaa
      421 ccaacagaaa aagattttga tgaaatatgc aatgagtttt attttacttt tacaaaatta
      481 gaaaaagctc ttttaagaaa acaatttata atgtcaaatt atttgttaaa ttctatgcgt
      541 gaaacacttt ttgatatgct tagttttaaa atgggactta aatttggttt tgaaatttgg
      601 ctaggtaaac aaaatactga tattctaaac tttttaaagc aaaaagaaat aaaaattatc
      661 ttaaattctt ttaatactac ttcacttgaa caaattgaaa aaacaagaaa aagcttgaaa
      721 atttatttca caaaaacacc aaatttgtag caaaaaaaga atgactttaa gcttttttct
      781 tatcgaaaaa atgtaaaaaa atattgcaaa attttaagaa aattataaag ttattttatt
      841 tttctttaat agaaactgct tttatttcgc atttttatag tctttaagtt cttttaaact
      901 gatatattta aaaataagtg caatttatac taaagtaaat attttaaata ccttgctctt
      961 atactttgca ctttaacttt ccttttttat caaaaatctt tatctaaaac atatttttta
     1021 tctattagaa atgacttttt tagtttctta ttttcttctt ttttgctttg tacataatat
     1081 acatcttttg catctgaaag aatatataaa tcttttactt ttaaaccttc ttcattttca
     1141 ataaagctga tattattatc taataattta ttttttacaa ttttattttt acttagtgtc
     1201 atttcttctg ccttaaaatt gcctattttc aaataagaag taatattttc atttaaaaat
     1261 ataatagata aaaataagat aatagtatta atcaaagcaa aaaatttaaa acttttaaag
     1321 tctttaaaac acaattgaag actaaaaaat ataaagataa tgaaacaacc aaaacctaga
     1381 taacaatagt taatttcttg agatttaatg atgataaaaa cactaataat agcaatagct
     1441 atatatatt
//
